Query psy1545
Match_columns 454
No_of_seqs 293 out of 2890
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 21:23:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1545.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1545hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eqs_A Coenzyme A disulfide re 100.0 1.9E-55 6.3E-60 439.1 40.0 390 3-449 1-424 (437)
2 3oc4_A Oxidoreductase, pyridin 100.0 2.9E-54 1E-58 433.3 38.0 401 1-454 1-429 (452)
3 3kd9_A Coenzyme A disulfide re 100.0 6E-54 2.1E-58 430.8 33.4 401 1-454 2-431 (449)
4 3lxd_A FAD-dependent pyridine 100.0 1.8E-52 6.2E-57 416.0 39.4 391 2-454 9-415 (415)
5 3ef6_A Toluene 1,2-dioxygenase 100.0 5.2E-53 1.8E-57 418.8 34.1 388 1-453 1-402 (410)
6 3iwa_A FAD-dependent pyridine 100.0 8.1E-53 2.8E-57 425.3 31.5 397 1-448 2-444 (472)
7 2cdu_A NADPH oxidase; flavoenz 100.0 1.1E-51 3.9E-56 414.6 36.2 394 3-448 1-430 (452)
8 3fg2_P Putative rubredoxin red 100.0 1.7E-51 5.8E-56 407.4 36.8 389 2-452 1-402 (404)
9 4b1b_A TRXR, thioredoxin reduc 100.0 3.5E-53 1.2E-57 429.5 23.6 382 2-451 42-515 (542)
10 3ntd_A FAD-dependent pyridine 100.0 1.5E-51 5.3E-56 425.5 35.5 396 2-448 1-451 (565)
11 2bc0_A NADH oxidase; flavoprot 100.0 4.3E-51 1.5E-55 414.1 36.0 395 1-448 34-475 (490)
12 3klj_A NAD(FAD)-dependent dehy 100.0 3.6E-52 1.2E-56 408.1 27.0 356 3-438 10-375 (385)
13 1nhp_A NADH peroxidase; oxidor 100.0 1.6E-50 5.4E-55 405.8 36.6 393 3-448 1-429 (447)
14 2gqw_A Ferredoxin reductase; f 100.0 2.3E-51 8E-56 406.5 30.0 384 2-452 7-402 (408)
15 3cgb_A Pyridine nucleotide-dis 100.0 2.5E-50 8.6E-55 407.5 37.4 393 3-448 37-466 (480)
16 1xdi_A RV3303C-LPDA; reductase 100.0 2.4E-51 8.2E-56 417.1 28.0 384 1-450 1-454 (499)
17 1q1r_A Putidaredoxin reductase 100.0 3.8E-50 1.3E-54 400.5 34.2 390 1-452 3-411 (431)
18 2a8x_A Dihydrolipoyl dehydroge 100.0 7E-51 2.4E-55 410.3 28.4 383 1-451 2-448 (464)
19 1ebd_A E3BD, dihydrolipoamide 100.0 1.3E-50 4.5E-55 407.3 30.3 382 1-451 2-445 (455)
20 2hqm_A GR, grase, glutathione 100.0 7.1E-51 2.4E-55 411.4 28.3 383 2-451 11-465 (479)
21 2qae_A Lipoamide, dihydrolipoy 100.0 8.5E-51 2.9E-55 410.1 28.5 382 1-451 1-452 (468)
22 1zmd_A Dihydrolipoyl dehydroge 100.0 5E-51 1.7E-55 412.4 25.5 383 2-451 6-457 (474)
23 3l8k_A Dihydrolipoyl dehydroge 100.0 7.1E-51 2.4E-55 410.1 26.5 382 2-451 4-448 (466)
24 3ics_A Coenzyme A-disulfide re 100.0 1.1E-49 3.8E-54 413.0 35.8 393 2-448 36-467 (588)
25 1ojt_A Surface protein; redox- 100.0 1.8E-50 6.2E-55 408.9 28.3 380 2-451 6-461 (482)
26 1ges_A Glutathione reductase; 100.0 1.9E-50 6.5E-55 405.1 28.1 379 2-451 4-444 (450)
27 1onf_A GR, grase, glutathione 100.0 1.3E-50 4.3E-55 411.5 26.3 390 1-451 1-490 (500)
28 4dna_A Probable glutathione re 100.0 1.9E-50 6.5E-55 406.8 26.8 379 2-451 5-444 (463)
29 3lad_A Dihydrolipoamide dehydr 100.0 2.2E-50 7.5E-55 408.1 27.0 382 1-450 2-454 (476)
30 2wpf_A Trypanothione reductase 100.0 5.5E-50 1.9E-54 405.9 29.3 380 2-451 7-469 (495)
31 3urh_A Dihydrolipoyl dehydroge 100.0 4.9E-50 1.7E-54 406.8 29.0 382 1-451 24-475 (491)
32 3dk9_A Grase, GR, glutathione 100.0 1.8E-50 6.3E-55 408.7 25.2 383 2-451 20-472 (478)
33 2eq6_A Pyruvate dehydrogenase 100.0 8.2E-50 2.8E-54 402.0 29.7 377 2-451 6-445 (464)
34 1zk7_A HGII, reductase, mercur 100.0 2E-49 7E-54 399.9 32.1 376 2-447 4-444 (467)
35 1fec_A Trypanothione reductase 100.0 1.1E-49 3.7E-54 403.5 30.0 383 2-451 3-465 (490)
36 3dgz_A Thioredoxin reductase 2 100.0 1.2E-49 4.2E-54 403.4 28.7 384 1-451 5-469 (488)
37 1dxl_A Dihydrolipoamide dehydr 100.0 1.3E-49 4.3E-54 402.0 28.5 381 2-451 6-454 (470)
38 3qfa_A Thioredoxin reductase 1 100.0 1.8E-49 6.2E-54 404.4 29.8 385 2-451 32-497 (519)
39 3dgh_A TRXR-1, thioredoxin red 100.0 2.7E-49 9.1E-54 400.6 30.3 382 2-451 9-469 (483)
40 2r9z_A Glutathione amide reduc 100.0 1.2E-49 4.2E-54 400.4 26.6 378 2-451 4-442 (463)
41 1xhc_A NADH oxidase /nitrite r 100.0 1.6E-49 5.4E-54 387.6 25.9 344 3-429 9-362 (367)
42 3ic9_A Dihydrolipoamide dehydr 100.0 1.3E-49 4.3E-54 403.2 25.6 379 2-451 8-457 (492)
43 3o0h_A Glutathione reductase; 100.0 1.8E-49 6.1E-54 401.8 26.0 379 2-451 26-464 (484)
44 1mo9_A ORF3; nucleotide bindin 100.0 9.1E-49 3.1E-53 399.8 29.0 378 2-447 43-506 (523)
45 1v59_A Dihydrolipoamide dehydr 100.0 6.2E-49 2.1E-53 397.7 26.6 381 2-451 5-462 (478)
46 1lvl_A Dihydrolipoamide dehydr 100.0 1.3E-47 4.4E-52 385.3 29.3 371 2-447 5-440 (458)
47 2yqu_A 2-oxoglutarate dehydrog 100.0 3.3E-48 1.1E-52 389.8 24.4 380 2-451 1-439 (455)
48 2v3a_A Rubredoxin reductase; a 100.0 1.1E-45 3.7E-50 363.4 33.2 353 2-421 4-370 (384)
49 2x8g_A Thioredoxin glutathione 100.0 2.9E-46 9.8E-51 388.0 28.0 385 2-451 107-576 (598)
50 1m6i_A Programmed cell death p 100.0 5E-45 1.7E-49 369.3 29.3 383 2-440 11-483 (493)
51 4g6h_A Rotenone-insensitive NA 100.0 1.1E-40 3.8E-45 337.1 22.3 290 3-347 43-399 (502)
52 4gcm_A TRXR, thioredoxin reduc 100.0 9.2E-39 3.1E-43 305.3 27.4 288 1-348 5-305 (312)
53 4a5l_A Thioredoxin reductase; 100.0 6E-38 2.1E-42 299.8 27.4 282 3-346 5-309 (314)
54 3hyw_A Sulfide-quinone reducta 100.0 3E-38 1E-42 314.7 23.4 304 1-353 1-337 (430)
55 2q7v_A Thioredoxin reductase; 100.0 9.2E-38 3.2E-42 300.1 26.0 284 2-351 8-314 (325)
56 4fk1_A Putative thioredoxin re 100.0 4E-38 1.4E-42 299.7 23.1 283 1-348 5-299 (304)
57 3cty_A Thioredoxin reductase; 100.0 1.1E-37 3.8E-42 298.8 26.1 283 2-350 16-317 (319)
58 2q0l_A TRXR, thioredoxin reduc 100.0 1.1E-37 3.7E-42 297.7 25.2 282 3-348 2-308 (311)
59 3itj_A Thioredoxin reductase 1 100.0 8.1E-38 2.8E-42 301.9 23.7 288 1-350 21-336 (338)
60 3f8d_A Thioredoxin reductase ( 100.0 1E-37 3.6E-42 299.0 23.7 285 1-350 14-318 (323)
61 3fbs_A Oxidoreductase; structu 100.0 9.9E-38 3.4E-42 295.7 22.6 277 1-350 1-293 (297)
62 3vrd_B FCCB subunit, flavocyto 100.0 4.2E-38 1.4E-42 311.3 20.4 298 3-353 3-328 (401)
63 1trb_A Thioredoxin reductase; 100.0 2.3E-37 8E-42 296.5 23.9 286 2-350 5-315 (320)
64 3r9u_A Thioredoxin reductase; 100.0 7.3E-37 2.5E-41 292.2 23.9 284 2-348 4-311 (315)
65 3sx6_A Sulfide-quinone reducta 100.0 9.7E-37 3.3E-41 304.6 24.4 304 3-354 5-349 (437)
66 2zbw_A Thioredoxin reductase; 100.0 1.9E-36 6.4E-41 292.2 24.3 287 2-351 5-319 (335)
67 1fl2_A Alkyl hydroperoxide red 100.0 3.9E-36 1.3E-40 286.8 26.1 285 2-349 1-305 (310)
68 3h28_A Sulfide-quinone reducta 100.0 1.5E-36 5.1E-41 302.7 22.4 303 1-353 1-337 (430)
69 3lzw_A Ferredoxin--NADP reduct 100.0 2.7E-36 9.4E-41 290.4 23.3 280 3-351 8-317 (332)
70 2a87_A TRXR, TR, thioredoxin r 100.0 9.9E-36 3.4E-40 287.2 26.6 284 2-351 14-318 (335)
71 1vdc_A NTR, NADPH dependent th 100.0 4.5E-36 1.5E-40 289.3 23.7 289 2-351 8-325 (333)
72 3ab1_A Ferredoxin--NADP reduct 100.0 1.7E-35 5.7E-40 288.5 26.0 288 2-351 14-330 (360)
73 3h8l_A NADH oxidase; membrane 100.0 6.2E-36 2.1E-40 296.5 22.1 287 3-349 2-336 (409)
74 4a9w_A Monooxygenase; baeyer-v 100.0 1.5E-34 5E-39 280.9 21.5 310 1-350 2-353 (357)
75 1hyu_A AHPF, alkyl hydroperoxi 100.0 7.2E-34 2.5E-38 289.3 25.6 278 2-348 212-515 (521)
76 3d1c_A Flavin-containing putat 100.0 6.8E-34 2.3E-38 277.9 21.1 287 1-349 3-339 (369)
77 2xve_A Flavin-containing monoo 100.0 2E-32 7E-37 274.8 26.7 266 1-349 1-341 (464)
78 2vdc_G Glutamate synthase [NAD 100.0 1.3E-33 4.4E-38 281.8 13.7 282 3-351 123-446 (456)
79 1cjc_A Protein (adrenodoxin re 100.0 1.2E-32 4E-37 275.6 15.5 317 2-349 6-395 (460)
80 1lqt_A FPRA; NADP+ derivative, 100.0 3E-32 1E-36 272.4 15.6 312 1-349 2-387 (456)
81 1gte_A Dihydropyrimidine dehyd 100.0 2.7E-32 9.3E-37 297.4 13.2 279 3-348 188-507 (1025)
82 2gag_A Heterotetrameric sarcos 100.0 2.2E-30 7.4E-35 280.6 22.3 275 2-348 128-443 (965)
83 2gv8_A Monooxygenase; FMO, FAD 100.0 1.7E-29 5.9E-34 253.0 26.0 264 2-348 6-361 (447)
84 3s5w_A L-ornithine 5-monooxyge 100.0 3E-30 1E-34 259.9 17.9 333 3-347 31-447 (463)
85 1y56_A Hypothetical protein PH 100.0 8.4E-30 2.9E-34 257.8 17.4 253 2-348 108-376 (493)
86 3k30_A Histamine dehydrogenase 100.0 5.7E-30 2E-34 269.2 15.2 269 2-352 391-678 (690)
87 1o94_A Tmadh, trimethylamine d 100.0 3.1E-30 1.1E-34 272.2 11.2 272 2-350 389-701 (729)
88 3gwf_A Cyclohexanone monooxyge 100.0 5E-27 1.7E-31 239.2 22.5 320 2-346 8-454 (540)
89 1ps9_A 2,4-dienoyl-COA reducta 99.9 1.9E-27 6.4E-32 249.4 18.4 254 2-344 373-671 (671)
90 3uox_A Otemo; baeyer-villiger 99.9 1.7E-25 5.7E-30 228.1 25.5 325 2-346 9-463 (545)
91 4ap3_A Steroid monooxygenase; 99.9 2.4E-25 8.2E-30 227.2 23.0 318 2-346 21-468 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 5.9E-24 2E-28 217.5 23.8 320 2-348 16-465 (542)
93 2ywl_A Thioredoxin reductase r 99.9 1.5E-22 5.3E-27 176.7 10.3 156 137-351 3-173 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 1.1E-19 3.8E-24 183.8 20.7 304 3-313 40-457 (501)
95 2e5v_A L-aspartate oxidase; ar 99.7 8.6E-19 2.9E-23 175.9 4.5 270 4-346 1-370 (472)
96 3fpz_A Thiazole biosynthetic e 99.6 3.8E-19 1.3E-23 170.3 -9.7 254 2-346 65-322 (326)
97 2cul_A Glucose-inhibited divis 99.5 2.5E-14 8.4E-19 129.8 10.1 176 136-347 4-230 (232)
98 2gqf_A Hypothetical protein HI 99.5 2.2E-15 7.4E-20 147.9 0.4 36 2-39 4-39 (401)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.3 1.3E-12 4.3E-17 129.8 3.3 84 227-315 215-307 (431)
100 2ywl_A Thioredoxin reductase r 99.1 2.2E-10 7.4E-15 99.2 10.6 103 3-108 2-111 (180)
101 1rp0_A ARA6, thiazole biosynth 99.1 2.6E-10 8.8E-15 106.5 8.8 194 136-349 40-275 (284)
102 1kf6_A Fumarate reductase flav 99.1 3.6E-10 1.2E-14 116.4 10.5 37 2-38 5-41 (602)
103 3ces_A MNMG, tRNA uridine 5-ca 99.0 8.4E-10 2.9E-14 112.7 11.9 141 2-163 28-220 (651)
104 2cul_A Glucose-inhibited divis 99.0 1.3E-09 4.4E-14 98.5 11.5 105 2-108 3-126 (232)
105 2zxi_A TRNA uridine 5-carboxym 98.9 4.4E-09 1.5E-13 107.0 10.8 142 2-164 27-220 (637)
106 3v76_A Flavoprotein; structura 98.9 7.6E-09 2.6E-13 101.7 11.7 103 2-107 27-187 (417)
107 3alj_A 2-methyl-3-hydroxypyrid 98.9 9E-09 3.1E-13 100.1 11.6 103 2-107 11-160 (379)
108 1rp0_A ARA6, thiazole biosynth 98.8 2E-08 6.8E-13 93.6 12.3 108 2-110 39-194 (284)
109 2bry_A NEDD9 interacting prote 98.8 1.3E-09 4.5E-14 109.8 3.3 174 95-278 37-233 (497)
110 2i0z_A NAD(FAD)-utilizing dehy 98.8 1.8E-08 6E-13 100.3 11.2 106 1-108 25-192 (447)
111 3pl8_A Pyranose 2-oxidase; sub 98.8 3.7E-10 1.3E-14 116.7 -1.4 59 227-286 271-334 (623)
112 3cp8_A TRNA uridine 5-carboxym 98.8 2.2E-08 7.5E-13 102.2 11.1 143 2-164 21-215 (641)
113 2bry_A NEDD9 interacting prote 98.8 1.4E-08 4.8E-13 102.2 9.3 107 2-110 92-233 (497)
114 3nlc_A Uncharacterized protein 98.7 2.5E-08 8.6E-13 100.9 10.1 105 2-108 107-278 (549)
115 1yvv_A Amine oxidase, flavin-c 98.7 5.4E-08 1.8E-12 92.7 11.8 37 1-39 1-37 (336)
116 3oz2_A Digeranylgeranylglycero 98.7 3.9E-08 1.3E-12 95.7 10.0 37 1-39 3-39 (397)
117 3dme_A Conserved exported prot 98.7 3E-07 1E-11 88.6 15.7 48 227-276 161-210 (369)
118 1k0i_A P-hydroxybenzoate hydro 98.7 8.9E-08 3E-12 93.5 12.0 106 1-108 1-164 (394)
119 3nix_A Flavoprotein/dehydrogen 98.7 8.2E-08 2.8E-12 94.6 11.5 35 2-38 5-39 (421)
120 2gf3_A MSOX, monomeric sarcosi 98.7 3.3E-07 1.1E-11 89.2 15.3 38 1-40 2-39 (389)
121 4dgk_A Phytoene dehydrogenase; 98.7 1.7E-07 5.8E-12 94.5 13.7 49 225-275 230-278 (501)
122 2x3n_A Probable FAD-dependent 98.7 1.2E-07 4E-12 92.9 11.9 104 2-107 6-166 (399)
123 3atr_A Conserved archaeal prot 98.6 6.7E-08 2.3E-12 96.3 9.7 35 2-38 6-40 (453)
124 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 1.6E-07 5.6E-12 89.8 10.7 101 3-105 2-163 (342)
125 3cgv_A Geranylgeranyl reductas 98.6 1.2E-07 4.1E-12 92.5 10.0 36 2-39 4-39 (397)
126 3fmw_A Oxygenase; mithramycin, 98.6 1.2E-07 4.3E-12 96.8 10.3 104 1-106 48-206 (570)
127 3kkj_A Amine oxidase, flavin-c 98.6 3.1E-08 1.1E-12 91.0 5.4 39 1-41 1-39 (336)
128 2vou_A 2,6-dihydroxypyridine h 98.6 2.7E-07 9.2E-12 90.2 11.7 104 2-107 5-153 (397)
129 1s3e_A Amine oxidase [flavin-c 98.6 6.4E-07 2.2E-11 90.8 14.6 39 2-42 4-42 (520)
130 2uzz_A N-methyl-L-tryptophan o 98.6 2.2E-07 7.6E-12 89.8 10.2 37 1-39 1-37 (372)
131 3dje_A Fructosyl amine: oxygen 98.5 1.3E-07 4.3E-12 93.8 8.3 48 227-276 172-222 (438)
132 3i3l_A Alkylhalidase CMLS; fla 98.5 3.5E-07 1.2E-11 93.8 11.8 35 2-38 23-57 (591)
133 3ihg_A RDME; flavoenzyme, anth 98.5 3.5E-07 1.2E-11 93.1 11.7 35 2-38 5-39 (535)
134 1ryi_A Glycine oxidase; flavop 98.5 2.4E-07 8.2E-12 89.9 9.9 36 2-39 17-52 (382)
135 2gmh_A Electron transfer flavo 98.5 3.4E-07 1.1E-11 94.0 11.2 39 1-39 34-76 (584)
136 3ka7_A Oxidoreductase; structu 98.5 1.2E-06 4.1E-11 86.3 14.2 38 3-42 1-38 (425)
137 3pvc_A TRNA 5-methylaminomethy 98.5 7E-07 2.4E-11 93.6 13.1 47 227-276 423-470 (689)
138 1y0p_A Fumarate reductase flav 98.5 6.8E-07 2.3E-11 91.6 12.5 37 2-40 126-162 (571)
139 3e1t_A Halogenase; flavoprotei 98.5 7E-07 2.4E-11 90.3 11.9 33 3-37 8-40 (512)
140 4a9w_A Monooxygenase; baeyer-v 98.5 7E-07 2.4E-11 85.5 11.4 121 136-275 4-132 (357)
141 3rp8_A Flavoprotein monooxygen 98.5 5.4E-07 1.8E-11 88.3 10.8 36 2-39 23-58 (407)
142 1y56_B Sarcosine oxidase; dehy 98.5 4.9E-07 1.7E-11 87.7 10.4 35 2-38 5-39 (382)
143 3ps9_A TRNA 5-methylaminomethy 98.5 2.9E-07 9.9E-12 96.4 9.3 47 227-276 428-474 (676)
144 2xdo_A TETX2 protein; tetracyc 98.5 7E-07 2.4E-11 87.3 11.3 35 2-38 26-60 (398)
145 2qa2_A CABE, polyketide oxygen 98.5 7.3E-07 2.5E-11 89.7 11.5 104 1-106 11-165 (499)
146 1qo8_A Flavocytochrome C3 fuma 98.5 6E-07 2E-11 92.0 11.0 37 2-40 121-157 (566)
147 2qa1_A PGAE, polyketide oxygen 98.5 7.3E-07 2.5E-11 89.8 11.3 103 2-106 11-164 (500)
148 2e4g_A Tryptophan halogenase; 98.5 7.6E-07 2.6E-11 90.8 11.6 47 229-277 207-254 (550)
149 3jsk_A Cypbp37 protein; octame 98.4 7.5E-07 2.6E-11 84.1 10.5 39 2-40 79-117 (344)
150 2gag_B Heterotetrameric sarcos 98.4 7E-07 2.4E-11 87.3 10.7 36 2-39 21-58 (405)
151 3axb_A Putative oxidoreductase 98.4 2.8E-07 9.5E-12 91.6 6.9 35 2-38 23-59 (448)
152 4hb9_A Similarities with proba 98.4 1.4E-06 4.7E-11 85.2 11.1 35 3-39 2-36 (412)
153 2yqu_A 2-oxoglutarate dehydrog 98.4 1.2E-06 4.2E-11 87.1 10.6 97 3-111 168-268 (455)
154 3klj_A NAD(FAD)-dependent dehy 98.4 9.2E-07 3.1E-11 85.9 9.2 109 135-278 9-119 (385)
155 3hyw_A Sulfide-quinone reducta 98.4 1E-06 3.5E-11 87.0 9.6 105 135-276 2-110 (430)
156 3c96_A Flavin-containing monoo 98.3 1.4E-06 4.7E-11 85.5 10.1 36 2-39 4-40 (410)
157 3c4n_A Uncharacterized protein 98.3 1.1E-06 3.6E-11 86.2 9.2 37 3-39 37-73 (405)
158 2qcu_A Aerobic glycerol-3-phos 98.3 2.2E-06 7.5E-11 86.4 11.6 36 1-38 2-37 (501)
159 2v3a_A Rubredoxin reductase; a 98.3 2E-06 6.7E-11 83.6 10.7 96 3-109 146-245 (384)
160 3vrd_B FCCB subunit, flavocyto 98.3 1.2E-06 4.2E-11 85.6 9.2 106 135-278 2-111 (401)
161 2aqj_A Tryptophan halogenase, 98.3 1.7E-06 5.8E-11 88.0 10.2 37 2-38 5-42 (538)
162 1nhp_A NADH peroxidase; oxidor 98.3 2.2E-06 7.6E-11 85.1 10.6 96 3-110 150-249 (447)
163 2gqw_A Ferredoxin reductase; f 98.3 2.5E-06 8.5E-11 83.6 10.6 94 3-109 146-241 (408)
164 2oln_A NIKD protein; flavoprot 98.3 2.2E-06 7.4E-11 83.6 10.0 36 2-39 4-39 (397)
165 2weu_A Tryptophan 5-halogenase 98.3 1.8E-06 6.3E-11 87.2 9.8 36 1-38 1-39 (511)
166 2gjc_A Thiazole biosynthetic e 98.3 5.5E-06 1.9E-10 77.8 12.1 39 2-40 65-103 (326)
167 3nyc_A D-arginine dehydrogenas 98.3 2.1E-06 7.2E-11 83.0 9.6 34 2-38 9-42 (381)
168 3lzw_A Ferredoxin--NADP reduct 98.3 1.5E-06 5.1E-11 82.3 8.2 118 135-278 7-129 (332)
169 1lvl_A Dihydrolipoamide dehydr 98.3 2.5E-06 8.5E-11 85.0 9.9 95 3-111 172-272 (458)
170 4at0_A 3-ketosteroid-delta4-5a 98.3 4.9E-06 1.7E-10 84.0 12.0 37 2-40 41-77 (510)
171 3itj_A Thioredoxin reductase 1 98.2 1.8E-06 6.1E-11 82.0 8.1 114 135-278 22-145 (338)
172 1ges_A Glutathione reductase; 98.2 3.9E-06 1.3E-10 83.3 10.8 96 3-110 168-268 (450)
173 2eq6_A Pyruvate dehydrogenase 98.2 4E-06 1.4E-10 83.6 10.9 97 3-111 170-275 (464)
174 3ef6_A Toluene 1,2-dioxygenase 98.2 3.7E-06 1.3E-10 82.4 10.2 96 3-109 144-243 (410)
175 3nlc_A Uncharacterized protein 98.2 1.5E-06 5.2E-11 87.8 7.3 52 223-276 227-278 (549)
176 2r9z_A Glutathione amide reduc 98.2 4.5E-06 1.5E-10 83.2 10.6 96 3-110 167-267 (463)
177 2zbw_A Thioredoxin reductase; 98.2 3.7E-06 1.3E-10 79.9 9.6 114 135-274 5-120 (335)
178 1xhc_A NADH oxidase /nitrite r 98.2 3.1E-06 1.1E-10 81.7 9.0 91 3-109 144-236 (367)
179 1d4d_A Flavocytochrome C fumar 98.2 7.4E-06 2.5E-10 83.9 12.3 37 2-40 126-162 (572)
180 3da1_A Glycerol-3-phosphate de 98.2 7E-06 2.4E-10 83.7 12.0 39 2-42 18-56 (561)
181 3fbs_A Oxidoreductase; structu 98.2 5.9E-06 2E-10 76.8 10.1 87 3-110 142-229 (297)
182 3sx6_A Sulfide-quinone reducta 98.2 3E-06 1E-10 83.8 8.4 107 135-278 4-115 (437)
183 3f8d_A Thioredoxin reductase ( 98.2 4.5E-06 1.5E-10 78.6 9.2 102 136-278 16-128 (323)
184 3lxd_A FAD-dependent pyridine 98.2 7.5E-06 2.6E-10 80.4 11.0 96 3-109 153-253 (415)
185 4eqs_A Coenzyme A disulfide re 98.2 6.1E-06 2.1E-10 81.5 10.3 94 3-110 148-243 (437)
186 1ebd_A E3BD, dihydrolipoamide 98.2 5.1E-06 1.8E-10 82.6 9.7 97 3-111 171-274 (455)
187 1fl2_A Alkyl hydroperoxide red 98.2 6.5E-06 2.2E-10 77.2 9.8 113 137-278 3-118 (310)
188 1onf_A GR, grase, glutathione 98.2 1.1E-05 3.6E-10 81.4 11.9 96 3-110 177-278 (500)
189 3h8l_A NADH oxidase; membrane 98.2 6.1E-06 2.1E-10 80.9 9.9 106 136-278 2-116 (409)
190 3fg2_P Putative rubredoxin red 98.2 7.8E-06 2.7E-10 80.0 10.5 96 3-109 143-243 (404)
191 3ab1_A Ferredoxin--NADP reduct 98.1 7.5E-06 2.6E-10 78.6 10.0 115 135-275 14-131 (360)
192 3h28_A Sulfide-quinone reducta 98.1 3.9E-06 1.4E-10 82.8 8.2 107 135-278 2-112 (430)
193 3v76_A Flavoprotein; structura 98.1 4E-06 1.4E-10 82.2 8.1 138 135-276 27-188 (417)
194 2gv8_A Monooxygenase; FMO, FAD 98.1 9.8E-06 3.3E-10 80.4 10.9 49 227-278 126-182 (447)
195 1q1r_A Putidaredoxin reductase 98.1 9.6E-06 3.3E-10 80.0 10.7 96 3-109 150-252 (431)
196 3ics_A Coenzyme A-disulfide re 98.1 9.7E-06 3.3E-10 83.4 10.8 95 3-109 188-284 (588)
197 2hqm_A GR, grase, glutathione 98.1 1E-05 3.5E-10 81.0 10.6 95 3-109 186-287 (479)
198 2dkh_A 3-hydroxybenzoate hydro 98.1 8.2E-06 2.8E-10 84.7 10.1 35 2-38 32-67 (639)
199 1v59_A Dihydrolipoamide dehydr 98.1 8.5E-06 2.9E-10 81.6 9.9 96 3-110 184-290 (478)
200 2bc0_A NADH oxidase; flavoprot 98.1 1.1E-05 3.8E-10 81.0 10.7 96 3-110 195-294 (490)
201 2r0c_A REBC; flavin adenine di 98.1 1.3E-05 4.4E-10 81.7 11.2 35 2-38 26-60 (549)
202 1ojt_A Surface protein; redox- 98.1 7.4E-06 2.5E-10 82.1 9.2 96 3-110 186-289 (482)
203 3gwf_A Cyclohexanone monooxyge 98.1 1.7E-05 6E-10 80.4 12.0 131 136-277 9-151 (540)
204 4gde_A UDP-galactopyranose mut 98.1 1.9E-06 6.4E-11 87.1 4.8 48 222-274 228-275 (513)
205 2q0l_A TRXR, thioredoxin reduc 98.1 8.6E-06 2.9E-10 76.4 9.0 111 137-278 3-117 (311)
206 3oc4_A Oxidoreductase, pyridin 98.1 2.3E-05 7.7E-10 77.9 12.5 96 3-110 148-247 (452)
207 1zmd_A Dihydrolipoyl dehydroge 98.1 1.3E-05 4.4E-10 80.1 10.6 97 3-110 179-285 (474)
208 4ap3_A Steroid monooxygenase; 98.1 7E-06 2.4E-10 83.5 8.6 133 135-278 21-164 (549)
209 3alj_A 2-methyl-3-hydroxypyrid 98.1 1.2E-05 4E-10 77.9 9.8 134 135-278 11-163 (379)
210 1mo9_A ORF3; nucleotide bindin 98.1 1.2E-05 4.1E-10 81.4 10.1 95 3-109 215-318 (523)
211 1pj5_A N,N-dimethylglycine oxi 98.1 1.1E-05 3.9E-10 86.3 10.5 35 2-38 4-39 (830)
212 4b1b_A TRXR, thioredoxin reduc 98.1 1.2E-05 4.3E-10 81.2 10.1 96 3-111 224-323 (542)
213 2a8x_A Dihydrolipoyl dehydroge 98.1 1.5E-05 5.2E-10 79.4 10.5 97 3-111 172-275 (464)
214 2wpf_A Trypanothione reductase 98.0 1.6E-05 5.4E-10 79.9 10.6 98 3-110 192-295 (495)
215 2h88_A Succinate dehydrogenase 98.0 2.1E-05 7.1E-10 80.9 11.4 35 2-38 18-52 (621)
216 1xdi_A RV3303C-LPDA; reductase 98.0 1.8E-05 6.1E-10 79.7 10.8 96 3-110 183-282 (499)
217 2pyx_A Tryptophan halogenase; 98.0 1.9E-05 6.3E-10 80.1 10.8 36 2-37 7-52 (526)
218 2q7v_A Thioredoxin reductase; 98.0 1.6E-05 5.4E-10 75.2 9.5 113 136-278 9-126 (325)
219 3cgb_A Pyridine nucleotide-dis 98.0 1.4E-05 4.8E-10 80.0 9.5 95 3-110 187-285 (480)
220 2vou_A 2,6-dihydroxypyridine h 98.0 1.8E-05 6.3E-10 77.1 10.1 139 135-277 5-155 (397)
221 1vdc_A NTR, NADPH dependent th 98.0 8.5E-06 2.9E-10 77.3 7.5 113 135-278 8-127 (333)
222 2gqf_A Hypothetical protein HI 98.0 1.4E-05 4.6E-10 78.1 9.1 51 223-277 116-170 (401)
223 2qae_A Lipoamide, dihydrolipoy 98.0 2E-05 6.9E-10 78.6 10.5 96 3-110 175-279 (468)
224 4g6h_A Rotenone-insensitive NA 98.0 2.1E-05 7.1E-10 79.1 10.6 109 136-278 43-172 (502)
225 1fec_A Trypanothione reductase 98.0 2E-05 6.8E-10 79.1 10.5 98 3-110 188-291 (490)
226 2x3n_A Probable FAD-dependent 98.0 2.2E-05 7.4E-10 76.6 10.2 138 136-277 7-168 (399)
227 2cdu_A NADPH oxidase; flavoenz 98.0 2.2E-05 7.4E-10 78.0 10.3 96 3-110 150-250 (452)
228 3uox_A Otemo; baeyer-villiger 98.0 1.7E-05 5.9E-10 80.5 9.6 127 136-278 10-152 (545)
229 1dxl_A Dihydrolipoamide dehydr 98.0 1.6E-05 5.5E-10 79.4 9.2 97 3-111 178-283 (470)
230 3nks_A Protoporphyrinogen oxid 98.0 4.7E-06 1.6E-10 83.3 5.4 41 1-43 1-43 (477)
231 3kd9_A Coenzyme A disulfide re 98.0 1.6E-05 5.5E-10 78.9 8.7 109 135-278 3-117 (449)
232 3o0h_A Glutathione reductase; 98.0 3.2E-05 1.1E-09 77.5 11.0 97 3-111 192-292 (484)
233 1hyu_A AHPF, alkyl hydroperoxi 98.0 2.3E-05 8E-10 79.2 10.0 115 135-278 212-329 (521)
234 3ic9_A Dihydrolipoamide dehydr 98.0 3.8E-05 1.3E-09 77.1 11.4 97 3-111 175-278 (492)
235 4fk1_A Putative thioredoxin re 98.0 2.7E-05 9.4E-10 72.8 9.7 103 137-278 8-120 (304)
236 1trb_A Thioredoxin reductase; 97.9 3.8E-05 1.3E-09 72.2 10.4 93 3-109 146-249 (320)
237 1m6i_A Programmed cell death p 97.9 4.1E-05 1.4E-09 76.9 11.1 98 3-109 181-284 (493)
238 3ntd_A FAD-dependent pyridine 97.9 3.1E-05 1.1E-09 79.2 10.3 95 3-109 152-269 (565)
239 2xve_A Flavin-containing monoo 97.9 3.2E-05 1.1E-09 77.0 9.8 51 227-278 112-171 (464)
240 1zk7_A HGII, reductase, mercur 97.9 4.1E-05 1.4E-09 76.3 10.4 94 3-110 177-274 (467)
241 3urh_A Dihydrolipoyl dehydroge 97.9 5.3E-05 1.8E-09 76.0 11.0 97 3-111 199-304 (491)
242 2a87_A TRXR, TR, thioredoxin r 97.9 2.8E-05 9.7E-10 73.8 8.4 111 135-278 14-129 (335)
243 3d1c_A Flavin-containing putat 97.9 4.8E-05 1.7E-09 73.1 10.0 101 3-109 167-274 (369)
244 4dna_A Probable glutathione re 97.9 5.4E-05 1.9E-09 75.3 10.5 96 3-111 171-272 (463)
245 3cty_A Thioredoxin reductase; 97.9 4.3E-05 1.5E-09 71.9 9.2 110 135-278 16-129 (319)
246 3iwa_A FAD-dependent pyridine 97.9 4.4E-05 1.5E-09 76.2 9.7 97 3-109 160-260 (472)
247 2i0z_A NAD(FAD)-utilizing dehy 97.9 3.8E-05 1.3E-09 76.1 9.2 51 223-275 141-191 (447)
248 3lad_A Dihydrolipoamide dehydr 97.8 6.8E-05 2.3E-09 74.9 10.9 97 3-111 181-284 (476)
249 3i6d_A Protoporphyrinogen oxid 97.8 8.5E-06 2.9E-10 81.2 4.2 41 231-274 248-288 (470)
250 1pn0_A Phenol 2-monooxygenase; 97.8 5.1E-05 1.7E-09 79.0 10.1 35 2-38 8-47 (665)
251 1k0i_A P-hydroxybenzoate hydro 97.8 8.1E-05 2.8E-09 72.3 10.8 134 136-278 3-166 (394)
252 3dk9_A Grase, GR, glutathione 97.8 7.1E-05 2.4E-09 74.8 10.3 96 3-110 188-296 (478)
253 3ihm_A Styrene monooxygenase A 97.8 1.2E-05 3.9E-10 79.4 4.3 36 1-38 21-56 (430)
254 3nrn_A Uncharacterized protein 97.8 1.7E-05 5.8E-10 77.9 5.5 50 224-278 197-246 (421)
255 1yvv_A Amine oxidase, flavin-c 97.8 7E-05 2.4E-09 70.9 9.6 46 230-278 119-165 (336)
256 3nix_A Flavoprotein/dehydrogen 97.8 4.5E-05 1.6E-09 74.8 8.5 140 136-276 6-167 (421)
257 2bcg_G Secretory pathway GDP d 97.8 1.9E-05 6.5E-10 78.4 5.8 41 2-44 11-51 (453)
258 3dgh_A TRXR-1, thioredoxin red 97.8 5.7E-05 1.9E-09 75.6 9.3 95 3-110 188-292 (483)
259 3s5w_A L-ornithine 5-monooxyge 97.8 9.5E-05 3.3E-09 73.5 10.7 106 3-108 228-378 (463)
260 2b9w_A Putative aminooxidase; 97.8 2.1E-05 7.2E-10 77.3 5.6 39 2-42 6-45 (424)
261 4a5l_A Thioredoxin reductase; 97.8 7.1E-05 2.4E-09 70.1 8.9 117 136-278 5-124 (314)
262 3dgz_A Thioredoxin reductase 2 97.8 8.3E-05 2.8E-09 74.5 9.8 96 3-111 186-291 (488)
263 2xdo_A TETX2 protein; tetracyc 97.8 0.00013 4.4E-09 71.1 10.9 139 135-278 26-185 (398)
264 3lov_A Protoporphyrinogen oxid 97.7 2.4E-05 8.2E-10 78.1 5.6 40 2-41 4-43 (475)
265 1rsg_A FMS1 protein; FAD bindi 97.7 2.3E-05 8E-10 79.1 5.4 40 2-43 8-48 (516)
266 3hdq_A UDP-galactopyranose mut 97.7 3.4E-05 1.2E-09 74.8 5.7 40 2-43 29-68 (397)
267 1w4x_A Phenylacetone monooxyge 97.7 9.3E-05 3.2E-09 75.2 9.2 128 136-274 17-153 (542)
268 1qo8_A Flavocytochrome C3 fuma 97.7 0.00019 6.4E-09 73.4 11.1 68 101-168 78-156 (566)
269 1v0j_A UDP-galactopyranose mut 97.7 4.1E-05 1.4E-09 74.7 5.8 41 2-43 7-47 (399)
270 3l8k_A Dihydrolipoyl dehydroge 97.7 0.00015 5.1E-09 72.2 9.9 95 3-110 173-275 (466)
271 1c0p_A D-amino acid oxidase; a 97.7 3.2E-05 1.1E-09 74.3 4.9 36 2-39 6-41 (363)
272 3qj4_A Renalase; FAD/NAD(P)-bi 97.6 0.00017 5.8E-09 68.6 9.8 42 229-273 122-163 (342)
273 4hb9_A Similarities with proba 97.6 7.3E-05 2.5E-09 72.8 7.3 140 136-277 2-168 (412)
274 3c4a_A Probable tryptophan hyd 97.6 3.9E-05 1.3E-09 74.3 5.3 37 3-39 1-37 (381)
275 3r9u_A Thioredoxin reductase; 97.6 0.00018 6.1E-09 67.3 9.5 90 3-109 148-246 (315)
276 2e1m_A L-glutamate oxidase; L- 97.6 4.8E-05 1.6E-09 73.1 5.5 38 2-41 44-82 (376)
277 2yg5_A Putrescine oxidase; oxi 97.6 4.2E-05 1.4E-09 75.9 5.3 39 2-42 5-43 (453)
278 1i8t_A UDP-galactopyranose mut 97.6 5.2E-05 1.8E-09 73.0 5.7 39 2-42 1-39 (367)
279 4gcm_A TRXR, thioredoxin reduc 97.6 0.0002 6.9E-09 67.0 9.7 110 137-278 8-119 (312)
280 2jae_A L-amino acid oxidase; o 97.6 4.7E-05 1.6E-09 76.3 5.6 39 2-42 11-49 (489)
281 2bi7_A UDP-galactopyranose mut 97.6 4.6E-05 1.6E-09 73.8 5.3 41 1-43 2-42 (384)
282 3k30_A Histamine dehydrogenase 97.6 0.00015 5E-09 76.0 9.5 96 3-109 524-626 (690)
283 3fmw_A Oxygenase; mithramycin, 97.6 0.0001 3.6E-09 75.2 8.0 137 136-276 50-208 (570)
284 3rp8_A Flavoprotein monooxygen 97.6 0.00019 6.5E-09 70.0 9.5 133 135-278 23-184 (407)
285 1ryi_A Glycine oxidase; flavop 97.6 0.00014 4.7E-09 70.3 8.2 50 223-276 171-220 (382)
286 3ihg_A RDME; flavoenzyme, anth 97.6 0.00025 8.4E-09 72.0 10.3 53 223-275 127-183 (535)
287 2ivd_A PPO, PPOX, protoporphyr 97.6 5.6E-05 1.9E-09 75.5 5.4 39 2-42 16-54 (478)
288 3g3e_A D-amino-acid oxidase; F 97.6 4.7E-05 1.6E-09 72.7 4.6 38 3-40 1-42 (351)
289 3qfa_A Thioredoxin reductase 1 97.6 0.00025 8.7E-09 71.5 10.1 96 3-111 211-319 (519)
290 3i3l_A Alkylhalidase CMLS; fla 97.5 0.00027 9.2E-09 72.3 9.9 137 135-275 23-188 (591)
291 3atr_A Conserved archaeal prot 97.5 0.00044 1.5E-08 68.5 11.2 139 136-278 7-165 (453)
292 2vvm_A Monoamine oxidase N; FA 97.5 7.4E-05 2.5E-09 75.0 5.3 49 224-275 263-312 (495)
293 1sez_A Protoporphyrinogen oxid 97.5 7.8E-05 2.7E-09 75.0 5.5 39 2-42 13-51 (504)
294 3cgv_A Geranylgeranyl reductas 97.5 0.00015 5.2E-09 70.2 7.3 137 136-276 5-163 (397)
295 4g65_A TRK system potassium up 97.5 0.0024 8.3E-08 63.1 15.9 52 114-165 210-266 (461)
296 2qa2_A CABE, polyketide oxygen 97.5 0.00032 1.1E-08 70.4 9.7 138 135-276 12-167 (499)
297 1y0p_A Fumarate reductase flav 97.5 0.00033 1.1E-08 71.6 9.9 52 223-275 262-317 (571)
298 4dsg_A UDP-galactopyranose mut 97.5 9.1E-05 3.1E-09 74.1 5.4 41 2-44 9-50 (484)
299 2rgh_A Alpha-glycerophosphate 97.5 0.00011 3.7E-09 75.1 5.9 39 2-42 32-70 (571)
300 2vdc_G Glutamate synthase [NAD 97.5 5.9E-05 2E-09 74.8 3.8 34 135-168 122-157 (456)
301 2zxi_A TRNA uridine 5-carboxym 97.4 0.00033 1.1E-08 71.4 9.0 140 135-278 27-183 (637)
302 2x8g_A Thioredoxin glutathione 97.4 0.00043 1.5E-08 71.2 10.1 95 3-110 287-398 (598)
303 3g5s_A Methylenetetrahydrofola 97.4 0.00012 4.2E-09 69.7 5.2 33 3-37 2-34 (443)
304 2qa1_A PGAE, polyketide oxygen 97.4 0.00038 1.3E-08 69.9 9.2 137 135-276 11-166 (500)
305 2uzz_A N-methyl-L-tryptophan o 97.4 0.00051 1.7E-08 65.9 9.5 49 224-276 157-205 (372)
306 3ces_A MNMG, tRNA uridine 5-ca 97.4 0.00057 1.9E-08 69.9 10.2 138 136-277 29-183 (651)
307 2gag_B Heterotetrameric sarcos 97.4 0.00063 2.2E-08 66.0 10.3 50 223-275 181-230 (405)
308 2wdq_A Succinate dehydrogenase 97.4 0.0001 3.6E-09 75.5 4.8 36 2-39 7-42 (588)
309 1d5t_A Guanine nucleotide diss 97.4 0.00016 5.3E-09 71.3 5.7 39 2-42 6-44 (433)
310 3e1t_A Halogenase; flavoprotei 97.4 0.0004 1.4E-08 70.0 8.7 54 224-277 119-174 (512)
311 1y56_B Sarcosine oxidase; dehy 97.4 0.00052 1.8E-08 66.1 9.1 49 223-275 156-205 (382)
312 2bs2_A Quinol-fumarate reducta 97.4 0.00016 5.4E-09 74.9 5.7 36 2-39 5-40 (660)
313 3cp8_A TRNA uridine 5-carboxym 97.3 0.00084 2.9E-08 68.6 10.7 139 135-277 21-176 (641)
314 3p1w_A Rabgdi protein; GDI RAB 97.3 0.00017 6E-09 71.3 5.6 51 223-274 263-313 (475)
315 3c96_A Flavin-containing monoo 97.3 0.00045 1.6E-08 67.4 8.5 137 135-278 4-172 (410)
316 1cjc_A Protein (adrenodoxin re 97.3 0.00016 5.5E-09 71.7 5.2 34 135-168 6-43 (460)
317 2iid_A L-amino-acid oxidase; f 97.3 0.00017 5.9E-09 72.4 5.3 39 2-42 33-71 (498)
318 3nyc_A D-arginine dehydrogenas 97.3 0.00024 8.2E-09 68.4 5.9 48 224-275 162-209 (381)
319 1jnr_A Adenylylsulfate reducta 97.2 0.00021 7.1E-09 74.1 4.5 35 2-38 22-60 (643)
320 3gyx_A Adenylylsulfate reducta 97.2 0.00029 9.9E-09 72.9 5.4 37 2-38 22-62 (662)
321 1chu_A Protein (L-aspartate ox 97.1 0.00031 1.1E-08 71.2 5.0 36 2-40 8-43 (540)
322 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.0014 4.9E-08 68.2 9.6 95 3-109 495-630 (671)
323 1o94_A Tmadh, trimethylamine d 97.1 0.00097 3.3E-08 70.1 8.2 95 3-109 529-648 (729)
324 3t37_A Probable dehydrogenase; 97.1 0.00038 1.3E-08 70.3 4.9 37 2-39 17-53 (526)
325 1d4d_A Flavocytochrome C fumar 97.1 0.0017 5.7E-08 66.4 9.6 53 223-276 262-318 (572)
326 1b37_A Protein (polyamine oxid 97.0 0.0005 1.7E-08 68.5 5.4 40 2-43 4-44 (472)
327 2gag_A Heterotetrameric sarcos 97.0 0.00073 2.5E-08 73.3 7.0 86 3-109 285-385 (965)
328 4at0_A 3-ketosteroid-delta4-5a 97.0 0.002 6.8E-08 64.8 9.7 52 223-275 209-264 (510)
329 4gut_A Lysine-specific histone 97.0 0.00051 1.7E-08 72.4 5.3 42 229-273 542-583 (776)
330 2gmh_A Electron transfer flavo 97.0 0.0034 1.2E-07 64.2 11.2 53 224-277 152-219 (584)
331 1y56_A Hypothetical protein PH 97.0 0.00078 2.7E-08 67.5 6.0 103 135-278 108-222 (493)
332 1lqt_A FPRA; NADP+ derivative, 97.0 0.00058 2E-08 67.6 5.0 34 135-168 3-45 (456)
333 2z3y_A Lysine-specific histone 96.9 0.00064 2.2E-08 70.7 5.4 37 3-41 108-144 (662)
334 2aqj_A Tryptophan halogenase, 96.9 0.0021 7.1E-08 65.1 8.9 52 224-277 173-224 (538)
335 1gte_A Dihydropyrimidine dehyd 96.9 0.0003 1E-08 76.9 2.7 100 135-277 187-290 (1025)
336 3qvp_A Glucose oxidase; oxidor 96.9 0.00062 2.1E-08 69.3 4.8 35 2-37 19-53 (583)
337 2oln_A NIKD protein; flavoprot 96.9 0.005 1.7E-07 59.5 11.0 48 224-275 161-208 (397)
338 2xag_A Lysine-specific histone 96.9 0.00075 2.6E-08 71.7 5.4 38 3-42 279-316 (852)
339 1kdg_A CDH, cellobiose dehydro 96.9 0.00073 2.5E-08 68.6 5.1 36 2-39 7-42 (546)
340 3oz2_A Digeranylgeranylglycero 96.9 0.00099 3.4E-08 64.2 5.7 136 137-276 6-163 (397)
341 3q9t_A Choline dehydrogenase a 96.8 0.00079 2.7E-08 68.5 4.9 36 2-38 6-41 (577)
342 2weu_A Tryptophan 5-halogenase 96.8 0.0024 8.3E-08 64.2 8.0 52 224-277 181-232 (511)
343 1pj5_A N,N-dimethylglycine oxi 96.7 0.0039 1.3E-07 66.6 9.6 50 223-275 158-207 (830)
344 3c4n_A Uncharacterized protein 96.7 0.0027 9.4E-08 61.7 7.6 49 223-275 179-236 (405)
345 2pyx_A Tryptophan halogenase; 96.7 0.0039 1.3E-07 62.9 8.8 50 226-277 185-235 (526)
346 1ju2_A HydroxynitrIle lyase; f 96.7 0.00095 3.3E-08 67.5 4.1 35 2-39 26-60 (536)
347 3fim_B ARYL-alcohol oxidase; A 96.7 0.00088 3E-08 68.0 3.6 37 2-39 2-38 (566)
348 2r0c_A REBC; flavin adenine di 96.6 0.0064 2.2E-07 61.7 9.9 33 136-168 27-61 (549)
349 2gjc_A Thiazole biosynthetic e 96.6 0.01 3.5E-07 55.5 10.1 33 136-168 66-102 (326)
350 2qcu_A Aerobic glycerol-3-phos 96.6 0.0082 2.8E-07 60.1 10.2 50 224-276 157-211 (501)
351 2jbv_A Choline oxidase; alcoho 96.6 0.0017 5.7E-08 65.9 5.0 37 2-39 13-49 (546)
352 3jsk_A Cypbp37 protein; octame 96.6 0.011 3.7E-07 55.7 10.2 34 135-168 79-116 (344)
353 3ayj_A Pro-enzyme of L-phenyla 96.5 0.0014 4.8E-08 67.9 3.9 35 3-39 57-100 (721)
354 4b63_A L-ornithine N5 monooxyg 96.4 0.022 7.5E-07 57.0 12.0 37 3-39 247-283 (501)
355 4gut_A Lysine-specific histone 96.4 0.019 6.4E-07 60.5 11.7 34 136-169 337-372 (776)
356 1coy_A Cholesterol oxidase; ox 96.4 0.0028 9.4E-08 63.7 5.1 36 2-39 11-46 (507)
357 1n4w_A CHOD, cholesterol oxida 96.3 0.0026 9E-08 63.8 4.8 36 2-39 5-40 (504)
358 2wdq_A Succinate dehydrogenase 96.3 0.02 6.7E-07 58.5 11.1 51 224-275 151-206 (588)
359 2dkh_A 3-hydroxybenzoate hydro 96.1 0.01 3.5E-07 61.4 7.7 52 224-275 149-211 (639)
360 1gpe_A Protein (glucose oxidas 96.1 0.004 1.4E-07 63.6 4.6 37 2-39 24-60 (587)
361 1vg0_A RAB proteins geranylger 96.1 0.006 2E-07 62.4 5.7 40 1-42 7-46 (650)
362 2e5v_A L-aspartate oxidase; ar 96.0 0.02 6.9E-07 56.8 8.9 51 224-277 127-178 (472)
363 1kf6_A Fumarate reductase flav 95.9 0.034 1.2E-06 56.9 10.7 49 224-274 142-196 (602)
364 3c4a_A Probable tryptophan hyd 95.9 0.0034 1.2E-07 60.5 2.7 33 136-168 1-37 (381)
365 2h88_A Succinate dehydrogenase 95.2 0.085 2.9E-06 54.1 10.5 50 224-275 163-217 (621)
366 3fwz_A Inner membrane protein 95.2 0.017 5.9E-07 46.7 4.3 36 1-38 6-41 (140)
367 3kkj_A Amine oxidase, flavin-c 95.1 0.015 5E-07 52.3 4.1 33 136-168 3-37 (336)
368 2bs2_A Quinol-fumarate reducta 94.9 0.022 7.4E-07 58.9 4.9 69 272-346 354-426 (660)
369 1id1_A Putative potassium chan 94.8 0.033 1.1E-06 45.8 5.0 35 1-37 2-36 (153)
370 3ic5_A Putative saccharopine d 94.8 0.027 9.2E-07 43.6 4.2 35 1-37 4-39 (118)
371 1chu_A Protein (L-aspartate ox 94.5 0.019 6.6E-07 58.0 3.5 58 289-347 352-409 (540)
372 3gyx_A Adenylylsulfate reducta 94.3 0.023 7.9E-07 58.7 3.5 41 298-346 446-486 (662)
373 3llv_A Exopolyphosphatase-rela 94.3 0.038 1.3E-06 44.6 4.2 33 3-37 7-39 (141)
374 4dgk_A Phytoene dehydrogenase; 94.2 0.024 8.1E-07 56.6 3.5 34 136-169 2-37 (501)
375 2g1u_A Hypothetical protein TM 94.2 0.045 1.5E-06 45.0 4.6 34 3-38 20-53 (155)
376 3lk7_A UDP-N-acetylmuramoylala 94.2 0.036 1.2E-06 54.5 4.7 80 3-113 10-90 (451)
377 3i83_A 2-dehydropantoate 2-red 94.0 0.05 1.7E-06 50.9 5.0 35 1-37 1-35 (320)
378 1lss_A TRK system potassium up 94.0 0.054 1.8E-06 43.3 4.6 33 3-37 5-37 (140)
379 1pn0_A Phenol 2-monooxygenase; 93.6 0.16 5.4E-06 52.6 8.3 33 136-168 9-48 (665)
380 3hn2_A 2-dehydropantoate 2-red 93.5 0.056 1.9E-06 50.3 4.4 35 1-37 1-35 (312)
381 3g17_A Similar to 2-dehydropan 93.0 0.064 2.2E-06 49.5 3.8 35 1-37 1-35 (294)
382 3dfz_A SIRC, precorrin-2 dehyd 93.0 0.11 3.8E-06 45.5 5.1 33 3-37 32-64 (223)
383 3l4b_C TRKA K+ channel protien 92.6 0.077 2.6E-06 46.4 3.6 33 4-38 2-34 (218)
384 3gg2_A Sugar dehydrogenase, UD 92.4 0.12 4E-06 50.8 5.0 36 1-38 1-36 (450)
385 3ego_A Probable 2-dehydropanto 92.4 0.12 4.2E-06 47.9 4.9 34 1-37 1-34 (307)
386 2iid_A L-amino-acid oxidase; f 92.3 0.1 3.5E-06 51.9 4.6 36 135-170 33-70 (498)
387 2hmt_A YUAA protein; RCK, KTN, 92.3 0.12 4E-06 41.5 4.1 33 3-37 7-39 (144)
388 3nrn_A Uncharacterized protein 92.0 0.12 4E-06 50.2 4.4 33 136-168 1-35 (421)
389 1ur5_A Malate dehydrogenase; o 91.9 0.16 5.5E-06 47.1 5.1 35 1-37 1-36 (309)
390 1kyq_A Met8P, siroheme biosynt 91.8 0.097 3.3E-06 47.5 3.3 33 3-37 14-46 (274)
391 3ka7_A Oxidoreductase; structu 91.6 0.14 4.7E-06 49.7 4.4 52 224-278 204-255 (425)
392 3ihm_A Styrene monooxygenase A 91.5 0.13 4.3E-06 50.3 4.1 32 135-166 22-55 (430)
393 3dfz_A SIRC, precorrin-2 dehyd 91.5 0.42 1.4E-05 41.8 6.9 31 134-164 30-62 (223)
394 4dio_A NAD(P) transhydrogenase 91.4 0.19 6.4E-06 48.2 4.9 34 3-38 191-224 (405)
395 4gde_A UDP-galactopyranose mut 91.3 0.16 5.5E-06 50.6 4.7 35 136-170 11-48 (513)
396 2hjr_A Malate dehydrogenase; m 91.2 0.22 7.6E-06 46.6 5.2 34 2-37 14-48 (328)
397 2ew2_A 2-dehydropantoate 2-red 91.1 0.2 6.9E-06 46.3 4.9 34 2-37 3-36 (316)
398 2e1m_A L-glutamate oxidase; L- 91.1 0.18 6.2E-06 48.1 4.5 36 135-170 44-82 (376)
399 3nks_A Protoporphyrinogen oxid 90.9 0.17 5.8E-06 49.9 4.4 46 226-274 244-289 (477)
400 2a9f_A Putative malic enzyme ( 90.9 0.2 7E-06 47.5 4.6 34 3-38 189-223 (398)
401 2b9w_A Putative aminooxidase; 90.9 0.17 6E-06 49.0 4.3 34 135-168 6-42 (424)
402 3dme_A Conserved exported prot 90.8 0.18 6.2E-06 47.5 4.3 32 136-167 5-38 (369)
403 1jnr_A Adenylylsulfate reducta 90.8 0.14 4.7E-06 52.9 3.6 41 299-347 426-466 (643)
404 1lld_A L-lactate dehydrogenase 90.7 0.24 8.1E-06 46.1 4.9 33 3-37 8-42 (319)
405 3p2y_A Alanine dehydrogenase/p 90.7 0.22 7.6E-06 47.3 4.7 34 3-38 185-218 (381)
406 3ius_A Uncharacterized conserv 90.7 0.24 8E-06 45.1 4.8 35 1-37 4-38 (286)
407 3k7m_X 6-hydroxy-L-nicotine ox 90.6 0.19 6.5E-06 48.8 4.3 32 137-168 3-36 (431)
408 1rsg_A FMS1 protein; FAD bindi 90.5 0.18 6.2E-06 50.4 4.1 42 231-274 215-256 (516)
409 1pzg_A LDH, lactate dehydrogen 90.4 0.29 9.8E-06 45.9 5.1 33 3-37 10-43 (331)
410 3lk7_A UDP-N-acetylmuramoylala 90.3 0.29 9.8E-06 48.1 5.4 33 134-166 8-42 (451)
411 2jae_A L-amino acid oxidase; o 90.3 0.2 6.9E-06 49.6 4.3 34 135-168 11-46 (489)
412 3ghy_A Ketopantoate reductase 90.3 0.26 9E-06 46.2 4.8 33 2-36 3-35 (335)
413 3i6d_A Protoporphyrinogen oxid 90.2 0.14 4.8E-06 50.3 3.0 35 135-169 5-47 (470)
414 3p1w_A Rabgdi protein; GDI RAB 90.2 0.35 1.2E-05 47.7 5.8 39 2-42 20-58 (475)
415 2g1u_A Hypothetical protein TM 90.0 0.31 1.1E-05 39.9 4.5 33 134-166 18-52 (155)
416 1z82_A Glycerol-3-phosphate de 90.0 0.3 1E-05 45.8 4.9 35 1-37 13-47 (335)
417 2ewd_A Lactate dehydrogenase,; 89.6 0.36 1.2E-05 44.9 5.1 33 3-37 5-38 (317)
418 4ffl_A PYLC; amino acid, biosy 89.5 0.32 1.1E-05 46.1 4.9 35 2-38 1-35 (363)
419 2ivd_A PPO, PPOX, protoporphyr 89.5 0.24 8.3E-06 48.8 4.1 43 229-274 248-293 (478)
420 1vl6_A Malate oxidoreductase; 89.5 0.31 1.1E-05 46.1 4.6 33 3-37 193-226 (388)
421 2x5o_A UDP-N-acetylmuramoylala 89.4 0.22 7.7E-06 48.6 3.8 35 3-39 6-40 (439)
422 2gf3_A MSOX, monomeric sarcosi 89.4 0.26 8.7E-06 47.0 4.1 50 223-276 157-206 (389)
423 2bi7_A UDP-galactopyranose mut 89.4 0.31 1.1E-05 46.7 4.6 35 136-170 4-40 (384)
424 1guz_A Malate dehydrogenase; o 89.4 0.4 1.4E-05 44.4 5.3 35 4-38 2-36 (310)
425 3g5s_A Methylenetetrahydrofola 89.4 0.26 9E-06 47.0 4.0 31 136-166 2-34 (443)
426 1c0p_A D-amino acid oxidase; a 89.2 0.3 1E-05 46.2 4.4 32 135-166 6-39 (363)
427 1s3e_A Amine oxidase [flavin-c 89.2 0.25 8.6E-06 49.4 4.0 44 229-275 225-268 (520)
428 2bcg_G Secretory pathway GDP d 89.0 0.27 9.1E-06 48.3 3.9 48 226-276 252-301 (453)
429 1ks9_A KPA reductase;, 2-dehyd 88.9 0.41 1.4E-05 43.5 5.0 33 4-38 2-34 (291)
430 4ezb_A Uncharacterized conserv 88.9 0.33 1.1E-05 45.1 4.3 35 1-37 23-58 (317)
431 1vpd_A Tartronate semialdehyde 88.8 0.34 1.2E-05 44.4 4.4 35 1-37 4-38 (299)
432 1x13_A NAD(P) transhydrogenase 88.8 0.39 1.3E-05 46.3 4.8 34 3-38 173-206 (401)
433 2o3j_A UDP-glucose 6-dehydroge 88.7 0.37 1.3E-05 47.7 4.7 36 3-38 10-45 (481)
434 1sez_A Protoporphyrinogen oxid 88.6 0.34 1.2E-05 48.1 4.5 34 135-168 13-48 (504)
435 3gt0_A Pyrroline-5-carboxylate 88.6 0.4 1.4E-05 42.7 4.5 35 1-37 1-39 (247)
436 4e12_A Diketoreductase; oxidor 88.5 0.48 1.6E-05 43.2 5.1 34 3-38 5-38 (283)
437 3k96_A Glycerol-3-phosphate de 88.5 0.39 1.3E-05 45.4 4.6 34 3-38 30-63 (356)
438 3c7a_A Octopine dehydrogenase; 88.5 0.34 1.1E-05 46.8 4.2 33 1-34 1-33 (404)
439 3qha_A Putative oxidoreductase 88.5 0.37 1.3E-05 44.3 4.3 35 2-38 15-49 (296)
440 1jw9_B Molybdopterin biosynthe 88.5 0.44 1.5E-05 42.5 4.7 35 3-39 32-67 (249)
441 2v6b_A L-LDH, L-lactate dehydr 88.4 0.45 1.5E-05 43.9 4.9 32 4-37 2-35 (304)
442 2raf_A Putative dinucleotide-b 88.4 0.52 1.8E-05 40.8 5.0 34 3-38 20-53 (209)
443 1bg6_A N-(1-D-carboxylethyl)-L 88.4 0.45 1.5E-05 44.9 5.0 34 2-37 4-37 (359)
444 1kyq_A Met8P, siroheme biosynt 88.4 0.43 1.5E-05 43.2 4.5 31 135-165 13-45 (274)
445 1t2d_A LDH-P, L-lactate dehydr 88.3 0.49 1.7E-05 44.1 5.1 33 3-37 5-38 (322)
446 2vvm_A Monoamine oxidase N; FA 88.3 0.66 2.3E-05 45.9 6.4 38 3-42 40-77 (495)
447 3gvi_A Malate dehydrogenase; N 88.1 0.52 1.8E-05 43.9 5.1 34 3-38 8-42 (324)
448 3g3e_A D-amino-acid oxidase; F 88.1 0.33 1.1E-05 45.7 3.8 31 136-166 1-39 (351)
449 1l7d_A Nicotinamide nucleotide 88.0 0.49 1.7E-05 45.3 5.0 34 3-38 173-206 (384)
450 2yg5_A Putrescine oxidase; oxi 88.0 0.38 1.3E-05 47.0 4.3 44 227-274 223-267 (453)
451 1evy_A Glycerol-3-phosphate de 88.0 0.36 1.2E-05 45.9 4.0 35 1-37 13-48 (366)
452 3g0o_A 3-hydroxyisobutyrate de 88.0 0.44 1.5E-05 43.9 4.5 34 2-37 7-40 (303)
453 3p7m_A Malate dehydrogenase; p 87.8 0.58 2E-05 43.5 5.2 35 1-37 4-39 (321)
454 1yj8_A Glycerol-3-phosphate de 87.8 0.42 1.4E-05 45.6 4.4 36 1-38 20-62 (375)
455 3hdq_A UDP-galactopyranose mut 87.8 0.42 1.4E-05 45.9 4.3 36 135-170 29-66 (397)
456 3ado_A Lambda-crystallin; L-gu 87.7 0.45 1.5E-05 44.1 4.3 34 3-38 7-40 (319)
457 3fpz_A Thiazole biosynthetic e 87.5 0.42 1.5E-05 44.4 4.1 34 135-168 65-102 (326)
458 1i8t_A UDP-galactopyranose mut 87.5 0.49 1.7E-05 45.0 4.6 33 137-169 3-37 (367)
459 3lov_A Protoporphyrinogen oxid 87.4 0.44 1.5E-05 46.9 4.4 41 231-275 249-289 (475)
460 3ps9_A TRNA 5-methylaminomethy 87.4 0.49 1.7E-05 49.0 5.0 33 136-168 273-307 (676)
461 3c85_A Putative glutathione-re 87.4 0.39 1.3E-05 40.4 3.5 34 3-37 40-73 (183)
462 3dje_A Fructosyl amine: oxygen 87.3 0.42 1.4E-05 46.5 4.1 33 135-167 6-41 (438)
463 1id1_A Putative potassium chan 87.3 0.62 2.1E-05 37.9 4.6 31 135-165 3-35 (153)
464 3oj0_A Glutr, glutamyl-tRNA re 87.2 0.32 1.1E-05 39.2 2.7 33 3-37 22-54 (144)
465 3pvc_A TRNA 5-methylaminomethy 87.2 0.46 1.6E-05 49.4 4.5 33 136-168 265-299 (689)
466 3c24_A Putative oxidoreductase 87.2 0.63 2.1E-05 42.4 5.0 33 3-37 12-45 (286)
467 3l9w_A Glutathione-regulated p 87.2 0.46 1.6E-05 45.9 4.2 34 3-38 5-38 (413)
468 2y0c_A BCEC, UDP-glucose dehyd 86.8 0.6 2.1E-05 46.1 4.9 33 3-37 9-41 (478)
469 3eag_A UDP-N-acetylmuramate:L- 86.7 0.55 1.9E-05 43.8 4.4 78 133-281 2-83 (326)
470 1f0y_A HCDH, L-3-hydroxyacyl-C 86.7 0.66 2.3E-05 42.6 4.9 33 3-37 16-48 (302)
471 1hyh_A L-hicdh, L-2-hydroxyiso 86.6 0.66 2.2E-05 42.9 4.9 35 3-37 2-36 (309)
472 1y6j_A L-lactate dehydrogenase 86.6 0.72 2.4E-05 42.9 5.1 35 3-37 8-42 (318)
473 3gpi_A NAD-dependent epimerase 86.6 0.66 2.2E-05 42.1 4.8 36 1-38 2-37 (286)
474 4huj_A Uncharacterized protein 86.5 0.43 1.5E-05 41.6 3.4 34 2-37 23-57 (220)
475 2pv7_A T-protein [includes: ch 86.5 0.75 2.6E-05 42.2 5.2 33 3-37 22-55 (298)
476 1pjc_A Protein (L-alanine dehy 86.4 0.61 2.1E-05 44.2 4.6 33 3-37 168-200 (361)
477 3ggo_A Prephenate dehydrogenas 86.3 0.66 2.2E-05 43.0 4.6 33 3-37 34-68 (314)
478 2aef_A Calcium-gated potassium 86.2 0.39 1.3E-05 42.3 3.0 34 2-38 9-42 (234)
479 3phh_A Shikimate dehydrogenase 86.2 0.82 2.8E-05 41.2 5.1 33 3-37 119-151 (269)
480 4hv4_A UDP-N-acetylmuramate--L 86.2 0.96 3.3E-05 44.9 6.0 75 3-113 23-99 (494)
481 2z3y_A Lysine-specific histone 86.1 0.57 1.9E-05 48.4 4.5 34 135-168 107-142 (662)
482 1lss_A TRK system potassium up 86.1 0.62 2.1E-05 36.8 3.9 31 135-165 4-36 (140)
483 1pjq_A CYSG, siroheme synthase 86.0 0.6 2E-05 45.8 4.4 33 3-37 13-45 (457)
484 3d0o_A L-LDH 1, L-lactate dehy 85.9 0.87 3E-05 42.3 5.3 35 3-37 7-41 (317)
485 3ic5_A Putative saccharopine d 85.7 0.56 1.9E-05 35.8 3.3 31 135-165 5-38 (118)
486 3pdu_A 3-hydroxyisobutyrate de 85.7 0.65 2.2E-05 42.4 4.3 34 3-38 2-35 (287)
487 1hdo_A Biliverdin IX beta redu 85.7 0.85 2.9E-05 38.7 4.8 36 1-38 1-38 (206)
488 2dpo_A L-gulonate 3-dehydrogen 85.6 0.67 2.3E-05 43.0 4.4 34 3-38 7-40 (319)
489 1oju_A MDH, malate dehydrogena 85.6 0.79 2.7E-05 42.0 4.7 32 4-37 2-35 (294)
490 3llv_A Exopolyphosphatase-rela 85.6 0.6 2E-05 37.3 3.5 31 135-165 6-38 (141)
491 3tl2_A Malate dehydrogenase; c 85.5 0.82 2.8E-05 42.4 4.9 33 3-37 9-42 (315)
492 3fi9_A Malate dehydrogenase; s 85.5 0.92 3.1E-05 42.5 5.2 36 2-37 8-44 (343)
493 3dtt_A NADP oxidoreductase; st 85.5 0.81 2.8E-05 40.6 4.7 35 2-38 19-53 (245)
494 2xag_A Lysine-specific histone 85.4 0.65 2.2E-05 49.3 4.6 34 135-168 278-313 (852)
495 3fwz_A Inner membrane protein 85.4 0.66 2.2E-05 37.1 3.7 31 135-165 7-39 (140)
496 2q3e_A UDP-glucose 6-dehydroge 85.2 0.75 2.6E-05 45.3 4.7 36 3-38 6-41 (467)
497 3hwr_A 2-dehydropantoate 2-red 85.1 0.87 3E-05 42.3 4.9 31 3-36 20-50 (318)
498 1a5z_A L-lactate dehydrogenase 85.1 0.84 2.9E-05 42.4 4.8 32 4-37 2-35 (319)
499 3axb_A Putative oxidoreductase 85.1 0.57 1.9E-05 45.7 3.8 50 224-276 189-255 (448)
500 2vns_A Metalloreductase steap3 85.1 0.85 2.9E-05 39.6 4.5 33 3-37 29-61 (215)
No 1
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=1.9e-55 Score=439.12 Aligned_cols=390 Identities=18% Similarity=0.302 Sum_probs=311.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc----ccccc--chhhhHHHHHhc-CcEEEc-c
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK----LLSDI--TVEETDANKFEG-LCTVIV-D 74 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~-~i~~~~-~ 74 (454)
.+|||||||+||++||..|++++++.+|+|||+++...+ ..+.++. ..... .+.......+.+ +++++. .
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSF--ANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYH 78 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSB--CGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC--CcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCC
Confidence 379999999999999999999977789999999886543 2222111 11111 111122334445 999865 4
Q ss_pred eEEEEeCcccEEEeccC-----cEEEecEEEEecCCCCCCCCCC-CceeeeeccchHHHHHHHhh--cCCeEEEEcCchh
Q psy1545 75 TVAAIDPRVNCVITEKQ-----NRIKYKTLCICTGASPRKIWYS-PHVITIRDTDSVAVLQEKLK--SAKKIVVIGNGGI 146 (454)
Q Consensus 75 ~v~~i~~~~~~v~~~~g-----~~i~~d~lviAtG~~p~~~~~~-~~~~~~~~~~~~~~l~~~~~--~~~~vvVvG~G~~ 146 (454)
+|+.++...+.+.+..+ .++.||+||||||++|+.|+++ ++++.+++.+++..+.+.+. .+++++|||+|++
T Consensus 79 ~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~i 158 (437)
T 4eqs_A 79 EVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYV 158 (437)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHH
T ss_pred eEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccc
Confidence 89999999887765432 3689999999999999999988 77888888888888876543 4789999999999
Q ss_pred HHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcccccccccc
Q psy1545 147 ATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHG 224 (454)
Q Consensus 147 g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 224 (454)
|+|+|..+. |.+||++++.+++++. +|++..+.+.+.+.+
T Consensus 159 g~E~A~~l~~~g~~Vtlv~~~~~ll~~-~d~~~~~~~~~~l~~------------------------------------- 200 (437)
T 4eqs_A 159 SLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDK------------------------------------- 200 (437)
T ss_dssp HHHHHHHHHHHTCEEEEEESSSCCSTT-SCGGGGHHHHHHHHH-------------------------------------
T ss_pred hhhhHHHHHhcCCcceeeeeecccccc-ccchhHHHHHHHhhc-------------------------------------
Confidence 999999986 9999999999999885 799999988888865
Q ss_pred CccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEecccccccc
Q psy1545 225 SSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSI 304 (454)
Q Consensus 225 ~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~ 304 (454)
+||++++++.|++++... +.+++|+++++|.|++|+|++||++ +++..|++++++|+|.||+++||++
T Consensus 201 ----~gV~i~~~~~v~~~~~~~-------v~~~~g~~~~~D~vl~a~G~~Pn~~-~~~~~gl~~~~~G~I~vd~~~~Ts~ 268 (437)
T 4eqs_A 201 ----REIPYRLNEEINAINGNE-------ITFKSGKVEHYDMIIEGVGTHPNSK-FIESSNIKLDRKGFIPVNDKFETNV 268 (437)
T ss_dssp ----TTCCEEESCCEEEEETTE-------EEETTSCEEECSEEEECCCEEESCG-GGTTSSCCCCTTSCEECCTTCBCSS
T ss_pred ----cceEEEeccEEEEecCCe-------eeecCCeEEeeeeEEEEeceecCcH-HHHhhhhhhccCCcEecCCCccCCC
Confidence 899999999999987653 7889999999999999999999998 9999999999999999999999999
Q ss_pred CceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcC
Q psy1545 305 SNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTL 384 (454)
Q Consensus 305 ~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~ 384 (454)
|||||+|||++.+....+.+..+++++.|.+||+++|+||++..... ++.........+++++++++|+++.+++
T Consensus 269 p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~-----~~~~~~~~~~~~~~p~ia~vGlte~~a~ 343 (437)
T 4eqs_A 269 PNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIE-----FKGFLGNNIVKFFDYTFASVGVKPNELK 343 (437)
T ss_dssp TTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCC-----CCCBCCCEEEEETTEEEEEEESCGGGGG
T ss_pred CCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCcc-----cccceeEEeeeeccceEEEeeCCHHHHH
Confidence 99999999999876666666667899999999999999999853211 1111122234456679999999998887
Q ss_pred CCCceEEEe---------ecCCccEEEEEE--ECCeEEEEEEEcCC---chHHHHHHHHhcCCCcchhhhhc--cCCCCC
Q psy1545 385 ENDYEILLR---------VTRGEEYIKLVM--KDGRMQGAVLIGET---EIEEMCENLILNQLDLTDIADDL--LNPNID 448 (454)
Q Consensus 385 ~~~~~~~~~---------~~~~~~~~k~~~--~~~~i~G~~~~g~~---~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~ 448 (454)
..+++...- .....+|+|+++ ++++|||+|++|++ +.++.++.+|++++|++||.+.. +||+|+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s 423 (437)
T 4eqs_A 344 QFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYS 423 (437)
T ss_dssp GSCEEEEEEEEESSCTTSSSCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTC
T ss_pred hCCceEEEEecCCchhhcCCCCcEEEEEEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCC
Confidence 666543211 113467999999 47999999999986 35789999999999999997754 478776
Q ss_pred C
Q psy1545 449 I 449 (454)
Q Consensus 449 ~ 449 (454)
-
T Consensus 424 ~ 424 (437)
T 4eqs_A 424 H 424 (437)
T ss_dssp C
T ss_pred c
Confidence 3
No 2
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=2.9e-54 Score=433.34 Aligned_cols=401 Identities=19% Similarity=0.221 Sum_probs=302.4
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccc-ccc-cccccc-cchhhhHHHHHhc-CcEEE-cce
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKT-VPV-TKLLSD-ITVEETDANKFEG-LCTVI-VDT 75 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~-~~~-~~~~~~-~~~~~~~~~~~~~-~i~~~-~~~ 75 (454)
|++||+|||||+||++||..|++.+++.+|+|||+++..++.... +.+ ...... .++.....+.+.+ +++++ ..+
T Consensus 1 M~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~ 80 (452)
T 3oc4_A 1 MSLKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNRE 80 (452)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCE
Confidence 778999999999999999999998888999999999876532211 111 111111 1111123344555 88886 569
Q ss_pred EEEEeCcccEEEec---cCcEEEecEEEEecCCCCCCCCCC----CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHH
Q psy1545 76 VAAIDPRVNCVITE---KQNRIKYKTLCICTGASPRKIWYS----PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIAT 148 (454)
Q Consensus 76 v~~i~~~~~~v~~~---~g~~i~~d~lviAtG~~p~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~ 148 (454)
|+.+++..+.+.+. ++..+.||+||||||++|+.|+++ ++++...+..+...+.+....+++++|||+|++|+
T Consensus 81 V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~ 160 (452)
T 3oc4_A 81 VVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGM 160 (452)
T ss_dssp EEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHH
T ss_pred EEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHH
Confidence 99999998887663 456899999999999999998887 45666666666666555555699999999999999
Q ss_pred HHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCc
Q psy1545 149 ELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSS 226 (454)
Q Consensus 149 e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l 226 (454)
|+|..+. |.+|+++++.++++++.+++++.+.+.+.+.+
T Consensus 161 E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~--------------------------------------- 201 (452)
T 3oc4_A 161 EAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEK--------------------------------------- 201 (452)
T ss_dssp HHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHT---------------------------------------
T ss_pred HHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHH---------------------------------------
Confidence 9999986 99999999999999877888888888888755
Q ss_pred cCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCc
Q psy1545 227 RDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISN 306 (454)
Q Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~ 306 (454)
.||++++++.|++++..++ .+.+.+++| ++++|.|++|+|++|+.+ +++.. +.++++|+|.||+++||+.|+
T Consensus 202 --~GV~i~~~~~v~~i~~~~~---~v~v~~~~g-~i~aD~Vv~A~G~~p~~~-~l~~~-~~~~~~g~i~vd~~~~t~~~~ 273 (452)
T 3oc4_A 202 --QAVIFHFEETVLGIEETAN---GIVLETSEQ-EISCDSGIFALNLHPQLA-YLDKK-IQRNLDQTIAVDAYLQTSVPN 273 (452)
T ss_dssp --TTEEEEETCCEEEEEECSS---CEEEEESSC-EEEESEEEECSCCBCCCS-SCCTT-SCBCTTSCBCCCTTCBCSSTT
T ss_pred --cCCEEEeCCEEEEEEccCC---eEEEEECCC-EEEeCEEEECcCCCCChH-HHHhh-hccCCCCCEEECcCccCCCCC
Confidence 8999999999999985442 346777777 899999999999999998 77654 788889999999999999999
Q ss_pred eeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCC
Q psy1545 307 VYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN 386 (454)
Q Consensus 307 Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ 386 (454)
|||+|||+..+....+.+...++++.|..||++||+||++.... ++....+.++..|+.+++++|+++.++...
T Consensus 274 IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~------~~~~~~~~~~~~~~~~~a~vG~te~~a~~~ 347 (452)
T 3oc4_A 274 VFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHR------FIGSLRTMGTKVGDYYLASTGLTETEGLFF 347 (452)
T ss_dssp EEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCC------CCCCCCCEEEEETTEEEEEEECCSGGGGGS
T ss_pred EEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCcc------CCCccccEEEEEcCeeEEEecCCHHHHHHC
Confidence 99999999865444444444578999999999999999975321 211122335566788999999999887644
Q ss_pred CceE--EE-ee------cCCccEEEEEEE--CCeEEEEEEEcCC---chHHHHHHHHhcCCCcchhhhhccCCCCCCCCC
Q psy1545 387 DYEI--LL-RV------TRGEEYIKLVMK--DGRMQGAVLIGET---EIEEMCENLILNQLDLTDIADDLLNPNIDIDDY 452 (454)
Q Consensus 387 ~~~~--~~-~~------~~~~~~~k~~~~--~~~i~G~~~~g~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
+++. .. .. ....+|+|++++ +++|+|+|++|+. +.++.++.+|++++|++|+.+..+.++.++++-
T Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~ 427 (452)
T 3oc4_A 348 PQTLASIIVRQPAPPLQHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTNI 427 (452)
T ss_dssp SSCEEEEEEEEECTTTTCSCEEEEEEEEETTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSCS
T ss_pred CCceEEEEEecCCccCCCCCeEEEEEEEECCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCCc
Confidence 3322 11 11 135689999994 6999999999983 468999999999999999976633333444454
Q ss_pred CC
Q psy1545 453 FD 454 (454)
Q Consensus 453 ~~ 454 (454)
||
T Consensus 428 ~~ 429 (452)
T 3oc4_A 428 YD 429 (452)
T ss_dssp SC
T ss_pred hh
Confidence 43
No 3
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=6e-54 Score=430.84 Aligned_cols=401 Identities=20% Similarity=0.267 Sum_probs=305.7
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccc-cccccccccc-ccchhhhHHHHH-hc-CcEEEcc-e
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVT-KTVPVTKLLS-DITVEETDANKF-EG-LCTVIVD-T 75 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~-~~-~i~~~~~-~ 75 (454)
.++||+|||||+||+++|..|++.+++.+|+|||+++..++.. ..+.+..... ..++.....+.+ .+ +++++.+ +
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 81 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAE 81 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCE
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCE
Confidence 0479999999999999999999987789999999998765322 1111111111 111111222334 23 9999877 9
Q ss_pred EEEEeCcccEEEeccC-cEEEecEEEEecCCCCCCCCCC----CceeeeeccchHHHHHHHhh--cCCeEEEEcCchhHH
Q psy1545 76 VAAIDPRVNCVITEKQ-NRIKYKTLCICTGASPRKIWYS----PHVITIRDTDSVAVLQEKLK--SAKKIVVIGNGGIAT 148 (454)
Q Consensus 76 v~~i~~~~~~v~~~~g-~~i~~d~lviAtG~~p~~~~~~----~~~~~~~~~~~~~~l~~~~~--~~~~vvVvG~G~~g~ 148 (454)
|+.++...+.+.+.++ ..+.||+||+|||++|+.|+++ ++++...+.+++..+.+.+. .+++++|||+|++|+
T Consensus 82 v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~ 161 (449)
T 3kd9_A 82 VIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGI 161 (449)
T ss_dssp EEEECSSEEEEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHH
T ss_pred EEEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHH
Confidence 9999998888888776 4899999999999999888876 45677778888888887765 678999999999999
Q ss_pred HHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCc
Q psy1545 149 ELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSS 226 (454)
Q Consensus 149 e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l 226 (454)
|+|..+. |.+|+++++.+++++..+++++.+.+.+.+.+
T Consensus 162 E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~--------------------------------------- 202 (449)
T 3kd9_A 162 EMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKK--------------------------------------- 202 (449)
T ss_dssp HHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTT---------------------------------------
T ss_pred HHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHh---------------------------------------
Confidence 9999986 99999999999999876788888888777754
Q ss_pred cCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCc
Q psy1545 227 RDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISN 306 (454)
Q Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~ 306 (454)
. |++++++.+.+++.++ .+...+.+++++++|.|++|+|++|+.+ +++..|++++++|+|.||+++||+.|+
T Consensus 203 --~-v~i~~~~~v~~i~~~~----~v~~v~~~g~~i~~D~Vv~a~G~~p~~~-l~~~~gl~~~~~G~i~vd~~~~t~~~~ 274 (449)
T 3kd9_A 203 --H-VNLRLQEITMKIEGEE----RVEKVVTDAGEYKAELVILATGIKPNIE-LAKQLGVRIGETGAIWTNEKMQTSVEN 274 (449)
T ss_dssp --T-SEEEESCCEEEEECSS----SCCEEEETTEEEECSEEEECSCEEECCH-HHHHTTCCBCTTSSBCCCTTCBCSSTT
T ss_pred --C-cEEEeCCeEEEEeccC----cEEEEEeCCCEEECCEEEEeeCCccCHH-HHHhCCccCCCCCCEEECCCCccCCCC
Confidence 7 9999999999998754 2333456778899999999999999998 888888999889999999999999999
Q ss_pred eeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCC
Q psy1545 307 VYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN 386 (454)
Q Consensus 307 Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ 386 (454)
|||+|||+..+....+.+..+++++.|..||+++|+||++... .++....+.+..+++++++++|+++.++...
T Consensus 275 IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~------~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~ 348 (449)
T 3kd9_A 275 VYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKEL------HFPGVLGTAVTKFMDVEIGKTGLTEMEALKE 348 (449)
T ss_dssp EEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCC------CCCCBCCCEEEEETTEEEEEEECCHHHHHHT
T ss_pred EEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCc------cCCCcccceEEEEcCcEEEEecCCHHHHHHC
Confidence 9999999976543333333467899999999999999997532 1222223345677788999999998776533
Q ss_pred CceEEE---e-------e-cCCccEEEEEEE--CCeEEEEEEEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 387 DYEILL---R-------V-TRGEEYIKLVMK--DGRMQGAVLIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 387 ~~~~~~---~-------~-~~~~~~~k~~~~--~~~i~G~~~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+++... . . ....+|+|++++ +++|+|+|++|+. +.++.++.+|++++|++|+.+..+..+.++++
T Consensus 349 g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~ 428 (449)
T 3kd9_A 349 GYDVRTAFIKASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAP 428 (449)
T ss_dssp TCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBC
T ss_pred CCceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCC
Confidence 332211 1 0 234689999994 5999999999998 46789999999999999998765443344445
Q ss_pred CCC
Q psy1545 452 YFD 454 (454)
Q Consensus 452 ~~~ 454 (454)
-||
T Consensus 429 ~~~ 431 (449)
T 3kd9_A 429 VWD 431 (449)
T ss_dssp SSC
T ss_pred chh
Confidence 444
No 4
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.8e-52 Score=415.98 Aligned_cols=391 Identities=20% Similarity=0.298 Sum_probs=320.6
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccc-----cccchhhhHHHHHhc-CcEEEcc-
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLL-----SDITVEETDANKFEG-LCTVIVD- 74 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~i~~~~~- 74 (454)
++||||||||+||++||..|++.++..+|+|||+++..++ .++.++..+ ....+......++.+ +++++.+
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 86 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPY--ERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGA 86 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCB--CSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETC
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCc--CcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCC
Confidence 4699999999999999999999955456999999987653 333333211 112222333455555 9999877
Q ss_pred eEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC----CceeeeeccchHHHHHHHhhc-CCeEEEEcCchhHHH
Q psy1545 75 TVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS----PHVITIRDTDSVAVLQEKLKS-AKKIVVIGNGGIATE 149 (454)
Q Consensus 75 ~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~----~~~~~~~~~~~~~~l~~~~~~-~~~vvVvG~G~~g~e 149 (454)
+++.+++..+.|.+.+++.+.||+||+|||++|+.|+++ ++++.+++.+++..+.+.+.. +++++|||+|++|+|
T Consensus 87 ~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e 166 (415)
T 3lxd_A 87 EVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLE 166 (415)
T ss_dssp CEEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHH
T ss_pred EEEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHH
Confidence 999999999999998899999999999999999998877 457777788899888887777 999999999999999
Q ss_pred HHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCcc
Q psy1545 150 LVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSR 227 (454)
Q Consensus 150 ~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 227 (454)
+|..+. |.+|+++++.++++++.+++++.+.+.+.+++
T Consensus 167 ~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~---------------------------------------- 206 (415)
T 3lxd_A 167 AAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRA---------------------------------------- 206 (415)
T ss_dssp HHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHH----------------------------------------
T ss_pred HHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHh----------------------------------------
Confidence 999986 99999999999999877788888888777755
Q ss_pred CCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCce
Q psy1545 228 DTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNV 307 (454)
Q Consensus 228 ~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~I 307 (454)
.||++++++.|++++.++ +....+.+++|+++++|.||+|+|++|+.+ +++..++.++ + +|.||+++||+.|+|
T Consensus 207 -~GV~i~~~~~v~~i~~~~--~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~-l~~~~gl~~~-~-gi~vd~~~~t~~~~i 280 (415)
T 3lxd_A 207 -HGVDLRTGAAMDCIEGDG--TKVTGVRMQDGSVIPADIVIVGIGIVPCVG-ALISAGASGG-N-GVDVDEFCRTSLTDV 280 (415)
T ss_dssp -TTCEEEETCCEEEEEESS--SBEEEEEESSSCEEECSEEEECSCCEESCH-HHHHTTCCCS-S-SEECCTTCBCSSTTE
T ss_pred -CCCEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECCCCccChH-HHHhCCCCcC-C-CEEECCCCCcCCCCE
Confidence 899999999999998764 234578899999999999999999999998 8888888875 4 499999999999999
Q ss_pred eecCcccccCCccc-cchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCC
Q psy1545 308 YAAGDVCTPSWDLA-KQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN 386 (454)
Q Consensus 308 ya~GD~~~~~~~~~-~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ 386 (454)
||+|||+..+.... +.+....+|+.|..||++||+||++... .+...|+ +|+.+|+.++..+|......
T Consensus 281 yA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p~----~~~~~~~~~~~~~G~~~~~~--- 350 (415)
T 3lxd_A 281 YAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAPV---PYKATPW----FWSNQYDLKLQTVGLSTGHD--- 350 (415)
T ss_dssp EECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCC---CCCCCCE----EEEEETTEEEEEEECCTTCS---
T ss_pred EEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCCC---CCCCCCe----eEeeeCCcEEEEEeCCCCCC---
Confidence 99999998765443 4444566899999999999999998532 2222222 46789999999999975321
Q ss_pred CceEEEeecC-CccEEEEEEECCeEEEEEEEcCCchHHHHHHHHhcCCCcchhhhhccCCCCCCCCCCC
Q psy1545 387 DYEILLRVTR-GEEYIKLVMKDGRMQGAVLIGETEIEEMCENLILNQLDLTDIADDLLNPNIDIDDYFD 454 (454)
Q Consensus 387 ~~~~~~~~~~-~~~~~k~~~~~~~i~G~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (454)
+.+++.++ ...|.++++++++|+|+.++|.......++.+|.++..++. +.|.+|+++|++.+|
T Consensus 351 --~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~l~~~~~ 415 (415)
T 3lxd_A 351 --NAVLRGDPATRSFSVVYLKGGKVVALDCVNMVKDYVQGKKLVEARAQIAP--EQLADAGVPLKEMLA 415 (415)
T ss_dssp --EEEEEEEGGGTEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHHTCCCCH--HHHTCTTSCGGGGCC
T ss_pred --EEEEEecCCCCeEEEEEEECCEEEEEEEECChHHHHHHHHHHHCCCCCCH--HHhcCCCCChHHhhC
Confidence 33444333 45799999999999999999999999999999999999986 789999999998775
No 5
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=5.2e-53 Score=418.81 Aligned_cols=388 Identities=16% Similarity=0.256 Sum_probs=317.0
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccc-----cccchhhhHHHHHhc-CcEEEcc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLL-----SDITVEETDANKFEG-LCTVIVD 74 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~i~~~~~ 74 (454)
|+++|+|||||+||++||..|++.++..+|+|||+++..++ +++.++..+ ....+ ....+++.+ +++++.+
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y--~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~ 77 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY--DRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLTG 77 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB--CSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEES
T ss_pred CCCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCc--CCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEeC
Confidence 77899999999999999999999955556999999987653 333332211 11112 222344555 9999887
Q ss_pred -eEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC----CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHH
Q psy1545 75 -TVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS----PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATE 149 (454)
Q Consensus 75 -~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e 149 (454)
+++.+++..+.|.+.+++++.||+||+|||++|+.|+++ ++++.+++.+++..+.+.+..+++++|||+|++|+|
T Consensus 78 ~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E 157 (410)
T 3ef6_A 78 PEVTALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCE 157 (410)
T ss_dssp CCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHH
T ss_pred CEEEEEECCCCEEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHH
Confidence 999999999999998899999999999999999998877 567778888999998887778999999999999999
Q ss_pred HHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCcc
Q psy1545 150 LVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSR 227 (454)
Q Consensus 150 ~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 227 (454)
+|..+. |.+|+++++.++++++.+++++.+.+.+.+.+
T Consensus 158 ~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~---------------------------------------- 197 (410)
T 3ef6_A 158 VATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTE---------------------------------------- 197 (410)
T ss_dssp HHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHH----------------------------------------
T ss_pred HHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHH----------------------------------------
Confidence 999986 99999999999998877788888888777755
Q ss_pred CCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCce
Q psy1545 228 DTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNV 307 (454)
Q Consensus 228 ~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~I 307 (454)
.||++++++.|++++.++ ....+.+++|+++++|.||+|+|++|+.+ +++..|++++ ++|.||+++||+.|+|
T Consensus 198 -~GV~i~~~~~v~~i~~~~---~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~-l~~~~gl~~~--~gi~vd~~~~t~~~~I 270 (410)
T 3ef6_A 198 -LGVQVELGTGVVGFSGEG---QLEQVMASDGRSFVADSALICVGAEPADQ-LARQAGLACD--RGVIVDHCGATLAKGV 270 (410)
T ss_dssp -HTCEEECSCCEEEEECSS---SCCEEEETTSCEEECSEEEECSCEEECCH-HHHHTTCCBS--SSEECCTTSBCSSTTE
T ss_pred -CCCEEEeCCEEEEEeccC---cEEEEEECCCCEEEcCEEEEeeCCeecHH-HHHhCCCccC--CeEEEccCeeECCCCE
Confidence 899999999999998764 25678999999999999999999999998 8888888875 4599999999999999
Q ss_pred eecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCC
Q psy1545 308 YAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEND 387 (454)
Q Consensus 308 ya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~ 387 (454)
||+|||+..+... +.+...++|+.|..||++||+||++... .+...| ..++.++|.++..+|.++...
T Consensus 271 yA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p----~~~~~~~~~~~~~~G~~~~~~---- 338 (410)
T 3ef6_A 271 FAVGDVASWPLRA-GGRRSLETYMNAQRQAAAVAAAILGKNV---SAPQLP----VSWTEIAGHRMQMAGDIEGPG---- 338 (410)
T ss_dssp EECGGGEEEEBTT-SSEECCCCHHHHHHHHHHHHHHHTTCCC---CCCBCC----EEEEEETTEEEEEESCSSSSS----
T ss_pred EEEEcceeccCCC-CCeeeechHHHHHHHHHHHHHHHcCCCC---CCCCCC----eeEEEECCceEEEEcCCCCCC----
Confidence 9999999865433 3333456799999999999999998532 222222 246788999999999976432
Q ss_pred ceEEEeecC-CccEEEEEEECCeEEEEEEEcCCchHHHHHHHHhcCCCcchhhhhccCCCCCCCCCC
Q psy1545 388 YEILLRVTR-GEEYIKLVMKDGRMQGAVLIGETEIEEMCENLILNQLDLTDIADDLLNPNIDIDDYF 453 (454)
Q Consensus 388 ~~~~~~~~~-~~~~~k~~~~~~~i~G~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 453 (454)
+.+++.++ ...|.++++++++|+|++++|.......+..+|.++..++. +.|.+|++++++.+
T Consensus 339 -~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~i~~~~~~~~--~~l~~~~~~l~~~~ 402 (410)
T 3ef6_A 339 -DFVSRGMPGSGAALLFRLQERRIQAVVAVDAPRDFALATRLVEARAAIEP--ARLADLSNSMRDFV 402 (410)
T ss_dssp -EEEEESCTTSSSEEEEEEETTEEEEEEEESCHHHHHHHHHHHHHTCBCCH--HHHHCTTSCGGGTC
T ss_pred -EEEEEeeCCCCeEEEEEEECCEEEEEEEECChHHHHHHHHHHhCCCCCCH--HHhcCCCCCHHHHh
Confidence 33444333 45689988899999999999999999999999999999988 78999999998764
No 6
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=8.1e-53 Score=425.31 Aligned_cols=397 Identities=18% Similarity=0.216 Sum_probs=293.9
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccc-ccc-ccccccc-cch------hhhHHHHHhc--Cc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTK-TVP-VTKLLSD-ITV------EETDANKFEG--LC 69 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~-~~~-~~~~~~~-~~~------~~~~~~~~~~--~i 69 (454)
+++||+|||||+||++||..|++.+++.+|+|||+++.+++... .+. +...... ..+ .....+.+.+ ++
T Consensus 2 ~~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi 81 (472)
T 3iwa_A 2 SLKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDV 81 (472)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------C
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCc
Confidence 04799999999999999999999888999999999987643211 111 1111111 111 1223334443 88
Q ss_pred EEE-cceEEEEeCcccEEEecc---Cc--EEEecEEEEecCCCCCCCCCC----CceeeeeccchHHHHHHHhh--cCCe
Q psy1545 70 TVI-VDTVAAIDPRVNCVITEK---QN--RIKYKTLCICTGASPRKIWYS----PHVITIRDTDSVAVLQEKLK--SAKK 137 (454)
Q Consensus 70 ~~~-~~~v~~i~~~~~~v~~~~---g~--~i~~d~lviAtG~~p~~~~~~----~~~~~~~~~~~~~~l~~~~~--~~~~ 137 (454)
+++ ..+|+.+++..+.+.+.+ |. .+.||+||+|||++|+.|+++ ++++.+.+..++..+.+.+. .+++
T Consensus 82 ~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~ 161 (472)
T 3iwa_A 82 EALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSK 161 (472)
T ss_dssp EEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSE
T ss_pred EEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCE
Confidence 886 569999999988887765 65 799999999999999988877 35666777777877776553 4899
Q ss_pred EEEEcCchhHHHHHHHhc---CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCC
Q psy1545 138 IVVIGNGGIATELVHELS---NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGP 214 (454)
Q Consensus 138 vvVvG~G~~g~e~a~~l~---g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 214 (454)
++|||+|.+|+|+|..+. |.+|+++++.++++++.+++++.+.+.+.+.+
T Consensus 162 vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~--------------------------- 214 (472)
T 3iwa_A 162 AVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEK--------------------------- 214 (472)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHH---------------------------
T ss_pred EEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHh---------------------------
Confidence 999999999999999884 89999999999998866788888888777755
Q ss_pred ccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCce
Q psy1545 215 DWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGI 294 (454)
Q Consensus 215 ~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i 294 (454)
.||++++++.|++++..++ .+.+.+++|+++++|.||+|+|++|+.+ +++..|++++++|+|
T Consensus 215 --------------~GV~i~~~~~v~~i~~~~~---~v~v~~~~g~~i~aD~Vv~a~G~~p~~~-l~~~~gl~~~~~g~i 276 (472)
T 3iwa_A 215 --------------NDVVVHTGEKVVRLEGENG---KVARVITDKRTLDADLVILAAGVSPNTQ-LARDAGLELDPRGAI 276 (472)
T ss_dssp --------------TTCEEECSCCEEEEEESSS---BEEEEEESSCEEECSEEEECSCEEECCH-HHHHHTCCBCTTCCE
T ss_pred --------------cCCEEEeCCEEEEEEccCC---eEEEEEeCCCEEEcCEEEECCCCCcCHH-HHHhCCccCCCCCCE
Confidence 8999999999999987542 4568888999999999999999999998 777778888889999
Q ss_pred EeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEE
Q psy1545 295 GVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVI 374 (454)
Q Consensus 295 ~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (454)
.||+++||+.|+|||+|||+..+....+.+..+++++.|..||++||+||++... .++..+.+.+..+++++++
T Consensus 277 ~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~------~~~~~~~~~~~~~~~~~~a 350 (472)
T 3iwa_A 277 IVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDA------TFPGAVGSWAVKLFEGSAS 350 (472)
T ss_dssp ECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCC------CCCCBCCCEEEECSSCEEE
T ss_pred EECCCcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCc------cCCCCCcceEEEECCceeE
Confidence 9999999999999999999976544434444567899999999999999997532 1222223344567788999
Q ss_pred EeecccCCcCCCC--ceEEE-e-------e-cCCccEEEEEE--ECCeEEEEEEEcC--C---chHHHHHHHHhcCCCcc
Q psy1545 375 LLGLFNGQTLEND--YEILL-R-------V-TRGEEYIKLVM--KDGRMQGAVLIGE--T---EIEEMCENLILNQLDLT 436 (454)
Q Consensus 375 ~vG~~~~~~~~~~--~~~~~-~-------~-~~~~~~~k~~~--~~~~i~G~~~~g~--~---~~~~~~~~~i~~~~~~~ 436 (454)
++|+++.++...+ +.... . . ....+|+|+++ ++++|+|+|++|+ . +.++.++.+|++++|++
T Consensus 351 ~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~ 430 (472)
T 3iwa_A 351 GAGLTVEGALREGYDAVNVHVEQFDRAHFYPEKTIMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVE 430 (472)
T ss_dssp EEECCHHHHHHTTCCEEEEEEEC-----------CEEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHH
T ss_pred EEECCHHHHHHcCCceEEEEEecCCccCccCCCceEEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHH
Confidence 9999997754332 22111 0 1 23468999999 4899999999999 2 46889999999999999
Q ss_pred hhhhhcc--CCCCC
Q psy1545 437 DIADDLL--NPNID 448 (454)
Q Consensus 437 ~~~~~~~--~~~~~ 448 (454)
++.+..+ +|+++
T Consensus 431 ~l~~~~~~~~P~~~ 444 (472)
T 3iwa_A 431 DISNAEVVYSPPFA 444 (472)
T ss_dssp HHHTCCCC------
T ss_pred HHhcccccCCCCCC
Confidence 9976653 36554
No 7
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.1e-51 Score=414.64 Aligned_cols=394 Identities=18% Similarity=0.249 Sum_probs=299.6
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccc-ccc-cccccc---ccchhhhHHHHHhc-CcEEEcc-e
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTK-TVP-VTKLLS---DITVEETDANKFEG-LCTVIVD-T 75 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~-~~~-~~~~~~---~~~~~~~~~~~~~~-~i~~~~~-~ 75 (454)
+||+|||||+||+++|..|++.+++.+|+|||+++..++... .+. ...... ...+.....+.+.+ +++++.+ +
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 80 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQ 80 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCE
Confidence 589999999999999999999877899999999986543211 110 011111 11111122344445 8998654 7
Q ss_pred EEEEeCcccEEEecc-----CcEEEecEEEEecCCCCCCCCCC----CceeeeeccchHHHHHHHhhcCCeEEEEcCchh
Q psy1545 76 VAAIDPRVNCVITEK-----QNRIKYKTLCICTGASPRKIWYS----PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGI 146 (454)
Q Consensus 76 v~~i~~~~~~v~~~~-----g~~i~~d~lviAtG~~p~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~ 146 (454)
+..++.+.+.+.+.+ +..++||+||+|||++|+.|+++ ++++.+.+.++...+.+....+++++|||+|++
T Consensus 81 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~ 160 (452)
T 2cdu_A 81 VTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYI 160 (452)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHH
T ss_pred EEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHH
Confidence 999998888887754 45799999999999999988876 457777777777777777778999999999999
Q ss_pred HHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcccccccccc
Q psy1545 147 ATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHG 224 (454)
Q Consensus 147 g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 224 (454)
|+|+|..+. |.+|+++++.++++++.+++++.+.+.+.+.+
T Consensus 161 g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~------------------------------------- 203 (452)
T 2cdu_A 161 GAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEA------------------------------------- 203 (452)
T ss_dssp HHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHH-------------------------------------
T ss_pred HHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHH-------------------------------------
Confidence 999999986 99999999999999866888888888777755
Q ss_pred CccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEecccccccc
Q psy1545 225 SSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSI 304 (454)
Q Consensus 225 ~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~ 304 (454)
.||++++++.|++++..++ ....+.+ +|+++++|.|++|+|++|+.+ +++.. ++++++|+|.||+++||+.
T Consensus 204 ----~Gv~i~~~~~v~~i~~~~~--~v~~v~~-~g~~i~~D~vv~a~G~~p~~~-ll~~~-l~~~~~G~i~Vd~~~~t~~ 274 (452)
T 2cdu_A 204 ----HGVNLVLGSKVAAFEEVDD--EIITKTL-DGKEIKSDIAILCIGFRPNTE-LLKGK-VAMLDNGAIITDEYMHSSN 274 (452)
T ss_dssp ----TTCEEEESSCEEEEEEETT--EEEEEET-TSCEEEESEEEECCCEEECCG-GGTTT-SCBCTTSCBCCCTTSBCSS
T ss_pred ----CCCEEEcCCeeEEEEcCCC--eEEEEEe-CCCEEECCEEEECcCCCCCHH-HHHHh-hhcCCCCCEEECCCcCcCC
Confidence 8999999999999986331 1223444 778899999999999999998 88777 8888889999999999999
Q ss_pred CceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcC
Q psy1545 305 SNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTL 384 (454)
Q Consensus 305 ~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~ 384 (454)
|+|||+|||+..+....+.+..+++++.|..||++||+||++... .+.......+..+|+++++.+|+++.++.
T Consensus 275 ~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~------~~~~~~~~~~~~~~~~~~~~vG~~~~~a~ 348 (452)
T 2cdu_A 275 RDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKV------KDMGTQSSSGLKLYGRTYVSTGINTALAK 348 (452)
T ss_dssp TTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCC------CCCCBCCCEEEEETTEEEEEEECCHHHHH
T ss_pred CCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCCC------cCCCccceEEEEECCeeeEeecCCHHHHH
Confidence 999999999986433333333457899999999999999997421 11111223356778889999999987654
Q ss_pred CCC--ceEE-Eee--------cCCccEEEEEE--ECCeEEEEEEEcC-C--chHHHHHHHHhcCCCcchhhhh--ccCCC
Q psy1545 385 END--YEIL-LRV--------TRGEEYIKLVM--KDGRMQGAVLIGE-T--EIEEMCENLILNQLDLTDIADD--LLNPN 446 (454)
Q Consensus 385 ~~~--~~~~-~~~--------~~~~~~~k~~~--~~~~i~G~~~~g~-~--~~~~~~~~~i~~~~~~~~~~~~--~~~~~ 446 (454)
..+ +... +.. ....+|+|+++ ++++|+|+|++|+ . +.++.++.+|++++|++++.+. ..||+
T Consensus 349 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt 428 (452)
T 2cdu_A 349 ANNLKVSEVIIADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQ 428 (452)
T ss_dssp HTTCCCEEEEEEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTT
T ss_pred HcCCceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCC
Confidence 322 2211 111 12357999999 4799999999999 4 2468899999999999999764 34665
Q ss_pred CC
Q psy1545 447 ID 448 (454)
Q Consensus 447 ~~ 448 (454)
++
T Consensus 429 ~~ 430 (452)
T 2cdu_A 429 FD 430 (452)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 8
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.7e-51 Score=407.45 Aligned_cols=389 Identities=21% Similarity=0.287 Sum_probs=317.7
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccc-----cccchhhhHHHHHhc-CcEEEcce
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLL-----SDITVEETDANKFEG-LCTVIVDT 75 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~i~~~~~~ 75 (454)
++||+|||||+||++||..|++.++..+|+|||+++..++ +++.++..+ ....+......++.+ +++++..+
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y--~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPY--QRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELISDR 78 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSB--CSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEECCC
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCC--CCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEEEE
Confidence 3689999999999999999999954459999999986643 333333211 111222333455555 99998899
Q ss_pred EEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC----CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHH
Q psy1545 76 VAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS----PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELV 151 (454)
Q Consensus 76 v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a 151 (454)
++.+++..+.|.+.+++.+.||+||+|||++|+.|+++ ++++.+++.+++..+.+.+..+++++|||+|.+|+|+|
T Consensus 79 v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A 158 (404)
T 3fg2_P 79 MVSIDREGRKLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFA 158 (404)
T ss_dssp EEEEETTTTEEEESSSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHH
T ss_pred EEEEECCCCEEEECCCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHH
Confidence 99999999999998999999999999999999988876 56777788888988888888899999999999999999
Q ss_pred HHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCC
Q psy1545 152 HELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDT 229 (454)
Q Consensus 152 ~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 229 (454)
..+. |.+|+++++.++++++.+++++.+.+.+.+.+ .
T Consensus 159 ~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~-----------------------------------------~ 197 (404)
T 3fg2_P 159 ATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSG-----------------------------------------A 197 (404)
T ss_dssp HHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHH-----------------------------------------T
T ss_pred HHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHh-----------------------------------------C
Confidence 9986 99999999999998877788888888777755 8
Q ss_pred ceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCceee
Q psy1545 230 KITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNVYA 309 (454)
Q Consensus 230 gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~Iya 309 (454)
||++++++.|++++.++ +....+.+++|+++++|.||+|+|++|+.+ +++..++.++ +| |.||+++||+.|+|||
T Consensus 198 GV~i~~~~~v~~i~~~~--~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~-l~~~~gl~~~-~G-i~vd~~~~t~~~~iya 272 (404)
T 3fg2_P 198 GIRMHYGVRATEIAAEG--DRVTGVVLSDGNTLPCDLVVVGVGVIPNVE-IAAAAGLPTA-AG-IIVDQQLLTSDPHISA 272 (404)
T ss_dssp TCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSEEEECCCEEECCH-HHHHTTCCBS-SS-EEECTTSBCSSTTEEE
T ss_pred CcEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECcCCccCHH-HHHhCCCCCC-CC-EEECCCcccCCCCEEE
Confidence 99999999999998754 234568899999999999999999999998 8888888875 44 9999999999999999
Q ss_pred cCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCCce
Q psy1545 310 AGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDYE 389 (454)
Q Consensus 310 ~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~ 389 (454)
+|||+..+.+..+.+....+|+.|..||++||+||++... .+...| .+|+.+++.++..+|..... .+
T Consensus 273 ~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p----~~~~~~~~~~~~~~G~~~~~-----~~ 340 (404)
T 3fg2_P 273 IGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDAK---PYDGYP----WFWSDQGDDKLQIVGLTAGF-----DQ 340 (404)
T ss_dssp CGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCCC---CCCCCC----EEEEEETTEEEEEEECCTTC-----CE
T ss_pred eecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCCC---CCCCCC----ceEeEECCcEEEEEeCCCCC-----CE
Confidence 9999987644444444456799999999999999998532 222222 24678999999999996532 13
Q ss_pred EEEeec-CCccEEEEEEECCeEEEEEEEcCCchHHHHHHHHhcCCCcchhhhhccCCCCCCCCC
Q psy1545 390 ILLRVT-RGEEYIKLVMKDGRMQGAVLIGETEIEEMCENLILNQLDLTDIADDLLNPNIDIDDY 452 (454)
Q Consensus 390 ~~~~~~-~~~~~~k~~~~~~~i~G~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
.+++.+ ....|.++++++++|+|+.++|.......+..+|.++..++. +.|.+|++++++.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~ 402 (404)
T 3fg2_P 341 VVIRGSVAERSFSAFCYKAGKLIGIESVNRAADHVFGRKILPLDKSVTP--EQAADLSFDLKKA 402 (404)
T ss_dssp EEEEEETTTTEEEEEEEETTEEEEEEEESCHHHHHHHHHHTTTTCCCCH--HHHHCTTSCHHHH
T ss_pred EEEEecCCCCcEEEEEEECCEEEEEEEeCCHHHHHHHHHHHHcCCCCCH--HHhcCCCCChHHh
Confidence 344433 356799999999999999999999999999999999999986 7899999998764
No 9
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=3.5e-53 Score=429.54 Aligned_cols=382 Identities=17% Similarity=0.189 Sum_probs=286.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC---------cccccccccccccc--------------------c
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG---------IVKAVTKTVPVTKL--------------------L 52 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~---------~~~~~~~~~~~~~~--------------------~ 52 (454)
+||++|||||+||++||.+++++ |.+|+|||+.. ..+.|.++.+.+.. +
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~--G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi 119 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAH--GARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGW 119 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT--TCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTE
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCc
Confidence 38999999999999999999999 99999999643 45555554332210 0
Q ss_pred ----cccchhh--------------hHHHHHhc-CcEEEcceEEEEeCcccEEEec----cCcEEEecEEEEecCCCCCC
Q psy1545 53 ----SDITVEE--------------TDANKFEG-LCTVIVDTVAAIDPRVNCVITE----KQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 53 ----~~~~~~~--------------~~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~----~g~~i~~d~lviAtG~~p~~ 109 (454)
...++.. .....+.+ +|+++.+...+++++...|... +++.+++|++|||||++|+.
T Consensus 120 ~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~ 199 (542)
T 4b1b_A 120 KFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHI 199 (542)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECC
T ss_pred ccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCC
Confidence 0111110 11122334 8999999999999887666543 23579999999999999999
Q ss_pred CCCC-CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhh
Q psy1545 110 IWYS-PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSIN 186 (454)
Q Consensus 110 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~ 186 (454)
|+.. ..-..+.++++++.+.+. |++++|||||++|+|+|..++ |++||++++ +++++. +|+++...+.+.+.
T Consensus 200 P~~~~~~~~~~~ts~~~l~l~~l---P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L~~-~D~ei~~~l~~~l~ 274 (542)
T 4b1b_A 200 PDDVEGAKELSITSDDIFSLKKD---PGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRG-FDQQCAVKVKLYME 274 (542)
T ss_dssp CSSSBTHHHHCBCHHHHTTCSSC---CCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSSTT-SCHHHHHHHHHHHH
T ss_pred CCcccCCCccccCchhhhccccC---CceEEEECCCHHHHHHHHHHHhcCCeEEEecc-cccccc-cchhHHHHHHHHHH
Confidence 8765 222223466777766543 899999999999999999997 999999987 456664 79999999988886
Q ss_pred ccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCE
Q psy1545 187 KTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDI 266 (454)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~ 266 (454)
+ .||++++++.+.+++..++ .+.+.+.++.++++|.
T Consensus 275 ~-----------------------------------------~gi~~~~~~~v~~~~~~~~---~~~v~~~~~~~~~~D~ 310 (542)
T 4b1b_A 275 E-----------------------------------------QGVMFKNGILPKKLTKMDD---KILVEFSDKTSELYDT 310 (542)
T ss_dssp H-----------------------------------------TTCEEEETCCEEEEEEETT---EEEEEETTSCEEEESE
T ss_pred h-----------------------------------------hcceeecceEEEEEEecCC---eEEEEEcCCCeEEEEE
Confidence 6 8999999999999988663 5778888888999999
Q ss_pred EEEeeccCcCcccccC--CCCceecCCCc-eEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhh
Q psy1545 267 VVSAIGVVPNSNIQVH--GTPFELAPDCG-IGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKC 343 (454)
Q Consensus 267 vi~a~G~~p~~~~~~~--~~~l~~~~~g~-i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~ 343 (454)
|++|+|++||++ .+. ..++.++.+++ +.+|+++||++|+|||+|||++.. +.+++.|..||+++++|
T Consensus 311 vLvAvGR~Pnt~-~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~---------p~La~~A~~eg~~aa~~ 380 (542)
T 4b1b_A 311 VLYAIGRKGDID-GLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENV---------PELAPVAIKAGEILARR 380 (542)
T ss_dssp EEECSCEEESCG-GGCGGGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTC---------CCCHHHHHHHHHHHHHH
T ss_pred EEEcccccCCcc-ccCcccceeeecccCceEeccccccccCCCeEEeccccCCc---------hhHHHHHHHHHHHHHHH
Confidence 999999999998 554 44677776665 578899999999999999998642 36889999999999999
Q ss_pred hcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCC----CceEEE-----------------e--------e
Q psy1545 344 MVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN----DYEILL-----------------R--------V 394 (454)
Q Consensus 344 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~----~~~~~~-----------------~--------~ 394 (454)
|++.......+..+|..+|+.| ++++||+++.++... .+..+. + .
T Consensus 381 i~g~~~~~~d~~~iP~~vft~P------eiA~VGlTE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (542)
T 4b1b_A 381 LFKDSDEIMDYSYIPTSIYTPI------EYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLD 454 (542)
T ss_dssp HHSCCCCCCCCSSCCEEECSSS------CEEEEECCHHHHHHHHCTTTEEEEEC--------------------------
T ss_pred HhcCCCcccCCCCCceEEeCCC------CeEEEeCCHHHHHHhCCCCcEEEEEeeccchhhhhhhhhhhhhccccccccc
Confidence 9986543334455788888877 899999998776421 111100 0 0
Q ss_pred cCCccEEEEEE---ECCeEEEEEEEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 395 TRGEEYIKLVM---KDGRMQGAVLIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 395 ~~~~~~~k~~~---~~~~i~G~~~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
....+|+|+++ ++++|||+|++|++ +.++.+..+|++++|++||.+. .+|++++++
T Consensus 455 ~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~-i~~HPTlsE 515 (542)
T 4b1b_A 455 VSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNC-IGIHPTDAE 515 (542)
T ss_dssp ---CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC----------
T ss_pred CCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcc-CCcCCCHHH
Confidence 12468999997 47999999999998 4678999999999999999665 555555555
No 10
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.5e-51 Score=425.51 Aligned_cols=396 Identities=20% Similarity=0.236 Sum_probs=305.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccc-ccc-cccccc-ccchhhhHHHHHhc--CcEEE-cce
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTK-TVP-VTKLLS-DITVEETDANKFEG--LCTVI-VDT 75 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~-~~~-~~~~~~-~~~~~~~~~~~~~~--~i~~~-~~~ 75 (454)
++||+|||||+||++||..|++.+++.+|+|||+++.+++... .+. ...... .........+.+.+ +++++ ..+
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHE 80 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 1589999999999999999999878899999999988653211 111 111111 11122223344443 89986 569
Q ss_pred EEEEeCcccEEEecc---Cc--EEEecEEEEecCCCCCCCCCC----CceeeeeccchHHHHHHHh--hcCCeEEEEcCc
Q psy1545 76 VAAIDPRVNCVITEK---QN--RIKYKTLCICTGASPRKIWYS----PHVITIRDTDSVAVLQEKL--KSAKKIVVIGNG 144 (454)
Q Consensus 76 v~~i~~~~~~v~~~~---g~--~i~~d~lviAtG~~p~~~~~~----~~~~~~~~~~~~~~l~~~~--~~~~~vvVvG~G 144 (454)
|+.+++..+.+.+.+ ++ ++.||+||||||++|+.|+++ .+++...+..++..+.+.+ ..+++++|||+|
T Consensus 81 V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG 160 (565)
T 3ntd_A 81 VVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGG 160 (565)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred EEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 999999988887753 44 799999999999999988887 4566666666666665433 347899999999
Q ss_pred hhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcccccccc
Q psy1545 145 GIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNL 222 (454)
Q Consensus 145 ~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 222 (454)
++|+|+|..+. |.+|+++++.+++++ .+++++...+.+.+.+
T Consensus 161 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~----------------------------------- 204 (565)
T 3ntd_A 161 FIGLEMMESLHHLGIKTTLLELADQVMT-PVDREMAGFAHQAIRD----------------------------------- 204 (565)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSSCT-TSCHHHHHHHHHHHHH-----------------------------------
T ss_pred HHHHHHHHHHHhcCCcEEEEEcCCccch-hcCHHHHHHHHHHHHH-----------------------------------
Confidence 99999999986 999999999999888 4788888877777755
Q ss_pred ccCccCCceEEEeCceEEEEEcC------------------CCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCC
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDS------------------EDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGT 284 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~------------------~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~ 284 (454)
.||++++++.+++++.+ . ...+.+.+++|+++++|.|++|+|++|+.+ +++..
T Consensus 205 ------~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~-l~~~~ 275 (565)
T 3ntd_A 205 ------QGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHI--KGHLSLTLSNGELLETDLLIMAIGVRPETQ-LARDA 275 (565)
T ss_dssp ------TTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCT--TCEEEEEETTSCEEEESEEEECSCEEECCH-HHHHH
T ss_pred ------CCCEEEeCCeEEEEeccccccccccccccccccccC--CCcEEEEEcCCCEEEcCEEEECcCCccchH-HHHhC
Confidence 89999999999999862 1 124667788899999999999999999998 87777
Q ss_pred CceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeee
Q psy1545 285 PFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTH 364 (454)
Q Consensus 285 ~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~ 364 (454)
|++++++|+|.||+++||+.|+|||+|||+..+....+.+..+++++.|..||++||+||++... .++....+.
T Consensus 276 g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~------~~~~~~~~~ 349 (565)
T 3ntd_A 276 GLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREE------RYQGTQGTA 349 (565)
T ss_dssp TCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCC------CCCCBCCCE
T ss_pred CcccCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCc------cCCCcccce
Confidence 88888899999999999999999999999976544444444567899999999999999997532 133233344
Q ss_pred eeeecCeEEEEeecccCCcCCC--CceEEE-ee--------cCCccEEEEEE--ECCeEEEEEEEcCCc---hHHHHHHH
Q psy1545 365 MTKFFGYKVILLGLFNGQTLEN--DYEILL-RV--------TRGEEYIKLVM--KDGRMQGAVLIGETE---IEEMCENL 428 (454)
Q Consensus 365 ~~~~~~~~~~~vG~~~~~~~~~--~~~~~~-~~--------~~~~~~~k~~~--~~~~i~G~~~~g~~~---~~~~~~~~ 428 (454)
+..+++.+++.+|+++.++... .+.... .. ....+|+|+++ ++++|+|+|++|+.+ .++.++.+
T Consensus 350 ~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~a 429 (565)
T 3ntd_A 350 ICKVFDLAVGATGKNEKQLKQAGIAFEKVYVHTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVA 429 (565)
T ss_dssp EEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHH
T ss_pred EEEEcCcEEEEecCCHHHHHHcCCCeEEEEEecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHH
Confidence 4677889999999999875432 332221 10 23457999999 589999999999986 57899999
Q ss_pred HhcCCCcchhhhhc--cCCCCC
Q psy1545 429 ILNQLDLTDIADDL--LNPNID 448 (454)
Q Consensus 429 i~~~~~~~~~~~~~--~~~~~~ 448 (454)
|++++|++|+.+.. ++|.++
T Consensus 430 i~~~~~~~~l~~~~~~~~P~~~ 451 (565)
T 3ntd_A 430 QRAGMTVEQLQHLELSYAPPYG 451 (565)
T ss_dssp HHTTCBHHHHTTCCCCCCTTTC
T ss_pred HHcCCCHHHHhhhhhccCcccC
Confidence 99999999997765 456554
No 11
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=4.3e-51 Score=414.14 Aligned_cols=395 Identities=18% Similarity=0.221 Sum_probs=297.1
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcC-CCCeEEEECCCCccccccc-cc-ccccccc-ccchhhhHHHHHhc-CcEEEcc-
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLH-PGESIGLVTPSGIVKAVTK-TV-PVTKLLS-DITVEETDANKFEG-LCTVIVD- 74 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~-~g~~v~lie~~~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~~~-~i~~~~~- 74 (454)
|++||+|||||+||+++|..|++.+ ++.+|+|||+++..++... .+ ....... ..++.....+.+.+ +++++.+
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~ 113 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMES 113 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCC
Confidence 3589999999999999999999983 3499999999886543211 11 0111101 11111122334445 8998654
Q ss_pred eEEEEeCcccEEEec-cC--cEEEecEEEEecCCCCCCCCCC--C-------------ceeeeeccchHHHHHHHh--hc
Q psy1545 75 TVAAIDPRVNCVITE-KQ--NRIKYKTLCICTGASPRKIWYS--P-------------HVITIRDTDSVAVLQEKL--KS 134 (454)
Q Consensus 75 ~v~~i~~~~~~v~~~-~g--~~i~~d~lviAtG~~p~~~~~~--~-------------~~~~~~~~~~~~~l~~~~--~~ 134 (454)
++..++.+.+.+.+. ++ .++.||+||||||++|+.|+++ + +++.+.+.++...+.+.+ ..
T Consensus 114 ~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~ 193 (490)
T 2bc0_A 114 PVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKD 193 (490)
T ss_dssp CEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTT
T ss_pred EEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcC
Confidence 799999888888775 43 4799999999999999888776 3 355555666777776666 56
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSL 212 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (454)
+++++|||+|++|+|+|..|+ |.+|+++++.++++++.+++++.+.+.+.+.+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~------------------------- 248 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEE------------------------- 248 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHT-------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHh-------------------------
Confidence 899999999999999999986 99999999999998866888888888777755
Q ss_pred CCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCC
Q psy1545 213 GPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDC 292 (454)
Q Consensus 213 ~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g 292 (454)
.||++++++.+++++.++ ....+.+ +|+++++|.|++|+|++|+.+ +++.. ++++++|
T Consensus 249 ----------------~GV~i~~~~~v~~i~~~~---~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~-ll~~~-l~~~~~G 306 (490)
T 2bc0_A 249 ----------------HGIQLAFGETVKEVAGNG---KVEKIIT-DKNEYDVDMVILAVGFRPNTT-LGNGK-IDLFRNG 306 (490)
T ss_dssp ----------------TTCEEEETCCEEEEECSS---SCCEEEE-SSCEEECSEEEECCCEEECCG-GGTTC-SCBCTTS
T ss_pred ----------------CCeEEEeCCEEEEEEcCC---cEEEEEE-CCcEEECCEEEECCCCCcChH-HHHhh-hccCCCC
Confidence 899999999999998743 2333555 678899999999999999998 87776 7888889
Q ss_pred ceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeE
Q psy1545 293 GIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYK 372 (454)
Q Consensus 293 ~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (454)
+|.||+++||+.|+|||+|||+..+....+.+..+++++.|..||++||+||++... .++......+..+|+++
T Consensus 307 ~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~------~~~~~~~~~~~~~~~~~ 380 (490)
T 2bc0_A 307 AFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDL------EGIGVQGSNGISIYGLH 380 (490)
T ss_dssp CBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCCC------CCCCBCCCEEEEETTEE
T ss_pred CEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCCC------CCCCcccceEEEECCcE
Confidence 999999999999999999999986433333333457899999999999999997421 11111122345677889
Q ss_pred EEEeecccCCcCCCCceEE---Ee----e-----cCCccEEEEEE--ECCeEEEEEEEcC-C--chHHHHHHHHhcCCCc
Q psy1545 373 VILLGLFNGQTLENDYEIL---LR----V-----TRGEEYIKLVM--KDGRMQGAVLIGE-T--EIEEMCENLILNQLDL 435 (454)
Q Consensus 373 ~~~vG~~~~~~~~~~~~~~---~~----~-----~~~~~~~k~~~--~~~~i~G~~~~g~-~--~~~~~~~~~i~~~~~~ 435 (454)
++.+|+++.++...+++.. +. . ....+|+|+++ ++++|+|+|++|+ . +.++.++.+|++++|+
T Consensus 381 ~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~ 460 (490)
T 2bc0_A 381 MVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTI 460 (490)
T ss_dssp EEEEECCHHHHHHTTCCEEEEEEEEESSCTTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBH
T ss_pred eEEeeCCHHHHHHcCCceEEEEEecCCcccccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCH
Confidence 9999999876543332221 11 0 12357999999 4799999999999 4 3578999999999999
Q ss_pred chhhhh--ccCCCCC
Q psy1545 436 TDIADD--LLNPNID 448 (454)
Q Consensus 436 ~~~~~~--~~~~~~~ 448 (454)
+++.+. ..+|+++
T Consensus 461 ~~l~~~~~~~~Pt~~ 475 (490)
T 2bc0_A 461 EKLALTDIFFLPHFN 475 (490)
T ss_dssp HHHHHSCCCCCTTTC
T ss_pred HHHhhcceecCCCCC
Confidence 999764 3555554
No 12
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=3.6e-52 Score=408.07 Aligned_cols=356 Identities=22% Similarity=0.314 Sum_probs=292.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccc----cccchhhhHHHHHhc-CcEEEcc-eE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLL----SDITVEETDANKFEG-LCTVIVD-TV 76 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~i~~~~~-~v 76 (454)
.+|+|||||+||++||..|+. ++.+|+|||+++..++ .++.++..+ ...++.....+++.+ +++++.+ +|
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~--~~~~itlie~~~~~~y--~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V 85 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALG--KCDDITMINSEKYLPY--YRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFA 85 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTT--TCSCEEEECSSSSCCB--CGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCE
T ss_pred CCEEEEcCcHHHHHHHHHHhC--CCCEEEEEECCCCCCc--ccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEE
Confidence 689999999999999999954 4899999999987653 233332222 112233334555666 9999866 89
Q ss_pred EEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC--CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHh
Q psy1545 77 AAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS--PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHEL 154 (454)
Q Consensus 77 ~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l 154 (454)
+.++++.+.|++++|+++.||+||||||++|+.|+++ ++++++++.+++.++++.+..+++++|||+|++|+|+|..|
T Consensus 86 ~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l 165 (385)
T 3klj_A 86 TSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAI 165 (385)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHH
T ss_pred EEEECCCCEEEECCCCEEECCEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999887 56777888899998888777789999999999999999999
Q ss_pred c--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceE
Q psy1545 155 S--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKIT 232 (454)
Q Consensus 155 ~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~ 232 (454)
. |.+||++++.++++++.+++++.+.+.+.+.+ .||+
T Consensus 166 ~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~-----------------------------------------~gV~ 204 (385)
T 3klj_A 166 IDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDR-----------------------------------------LGIK 204 (385)
T ss_dssp HHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHT-----------------------------------------TTCE
T ss_pred HhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHh-----------------------------------------CCCE
Confidence 6 99999999999999887888888888777755 8999
Q ss_pred EEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCceeecCc
Q psy1545 233 IEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNVYAAGD 312 (454)
Q Consensus 233 i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD 312 (454)
+++++.++++ |+++++|.|++|+|++|+.+ +++..++.++ ++|.||+++||+.|+|||+||
T Consensus 205 ~~~~~~v~~i----------------g~~~~~D~vv~a~G~~p~~~-~~~~~gl~~~--~gi~vd~~~~t~~~~IyA~GD 265 (385)
T 3klj_A 205 IYTNSNFEEM----------------GDLIRSSCVITAVGVKPNLD-FIKDTEIASK--RGILVNDHMETSIKDIYACGD 265 (385)
T ss_dssp EECSCCGGGC----------------HHHHHHSEEEECCCEEECCG-GGTTSCCCBS--SSEEECTTCBCSSTTEEECGG
T ss_pred EEeCCEEEEc----------------CeEEecCeEEECcCcccChh-hhhhcCCCcC--CCEEECCCcccCCCCEEEEEe
Confidence 9999877544 45789999999999999998 8888888874 449999999999999999999
Q ss_pred ccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCCceEEE
Q psy1545 313 VCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDYEILL 392 (454)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 392 (454)
|+..+.. .+++|+.|..||+.||+||++... .|+..+.+.++++++.+++++|.++.++. +.++
T Consensus 266 ~a~~~~~------~~~~~~~A~~qg~~aa~~i~g~~~------~~~~~~~~~~~~~~~~~~~~~G~~~~~~~----~~~~ 329 (385)
T 3klj_A 266 VAEFYGK------NPGLINIANKQGEVAGLNACGEDA------SYSEIIPSPILKVSGISIISCGDIENNKP----SKVF 329 (385)
T ss_dssp GEEETTB------CCCCHHHHHHHHHHHHHHHTTCCC------CCCCCCCCCEEEETTEEEEEESCCTTCCC----SEEE
T ss_pred eEecCCC------cccHHHHHHHHHHHHHHHhcCCCc------CCCCCCCcEEEEeCCCcEEEEcCCCCCCC----eEEE
Confidence 9985421 246789999999999999998532 23333345567889999999999875421 1233
Q ss_pred eecCCccEEEEEEECCeEEEEEEEcCCchHHHHHHHHhcCCCcchh
Q psy1545 393 RVTRGEEYIKLVMKDGRMQGAVLIGETEIEEMCENLILNQLDLTDI 438 (454)
Q Consensus 393 ~~~~~~~~~k~~~~~~~i~G~~~~g~~~~~~~~~~~i~~~~~~~~~ 438 (454)
++.....|+|+++++|+|+|++++|+......+..+|+++.+++++
T Consensus 330 ~~~~~~~~~~~~~~~~~l~g~~~~g~~~~~~~~~~~i~~~~~~~~~ 375 (385)
T 3klj_A 330 RSTQEDKYIVCMLKENKIDAAAVIGDVSLGTKLKKAIDSSKSFDNI 375 (385)
T ss_dssp EEECSSCEEEEEEETTEEEEEEEESCHHHHHHHHHHHHTTCBCSCC
T ss_pred EECCCCeEEEEEEECCEEEEEEEECCcHHHHHHHHHHHcCCCcccc
Confidence 3344568999999999999999999998888999999999999996
No 13
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=1.6e-50 Score=405.80 Aligned_cols=393 Identities=23% Similarity=0.309 Sum_probs=296.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccc-cccc-cccccc-cchhhhHHHHHhc-CcEEE-cceEE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTK-TVPV-TKLLSD-ITVEETDANKFEG-LCTVI-VDTVA 77 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~-~~~~-~~~~~~-~~~~~~~~~~~~~-~i~~~-~~~v~ 77 (454)
+||+|||||+||++||..|++.+++.+|+|||+++..++... .+.+ ...... .++.....+.+.+ +++++ ...+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 489999999999999999999877899999999986543211 1100 111111 1112222344555 89985 45888
Q ss_pred EEeCcccEEEecc---Cc--EEEecEEEEecCCCCCCCCCC----CceeeeeccchHHHHHHHhh--cCCeEEEEcCchh
Q psy1545 78 AIDPRVNCVITEK---QN--RIKYKTLCICTGASPRKIWYS----PHVITIRDTDSVAVLQEKLK--SAKKIVVIGNGGI 146 (454)
Q Consensus 78 ~i~~~~~~v~~~~---g~--~i~~d~lviAtG~~p~~~~~~----~~~~~~~~~~~~~~l~~~~~--~~~~vvVvG~G~~ 146 (454)
.++.+.+.|.+.+ |+ +++||+||||||++|+.|+++ ++++++.+.+++..+.+.+. .+++++|||+|++
T Consensus 81 ~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~ 160 (447)
T 1nhp_A 81 AIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYI 160 (447)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHH
T ss_pred EEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHH
Confidence 9998888887754 54 489999999999999988877 34666667778877777666 6899999999999
Q ss_pred HHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcccccccccc
Q psy1545 147 ATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHG 224 (454)
Q Consensus 147 g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 224 (454)
|+|+|..+. |.+|+++++.++++++.+++++.+.+.+.+.+
T Consensus 161 g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~------------------------------------- 203 (447)
T 1nhp_A 161 GIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEA------------------------------------- 203 (447)
T ss_dssp HHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHT-------------------------------------
T ss_pred HHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHh-------------------------------------
Confidence 999999986 99999999999988866788777777777654
Q ss_pred CccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEecccccccc
Q psy1545 225 SSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSI 304 (454)
Q Consensus 225 ~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~ 304 (454)
.||++++++.|++++.++ ....+.+ ++.++++|.|++|+|++|+.+ +++.. ++++.+|+|.||+++||+.
T Consensus 204 ----~gv~i~~~~~v~~i~~~~---~v~~v~~-~~~~i~~d~vi~a~G~~p~~~-~~~~~-~~~~~~G~i~Vd~~~~t~~ 273 (447)
T 1nhp_A 204 ----NNITIATGETVERYEGDG---RVQKVVT-DKNAYDADLVVVAVGVRPNTA-WLKGT-LELHPNGLIKTDEYMRTSE 273 (447)
T ss_dssp ----TTEEEEESCCEEEEECSS---BCCEEEE-SSCEEECSEEEECSCEEESCG-GGTTT-SCBCTTSCBCCCTTCBCSS
T ss_pred ----CCCEEEcCCEEEEEEccC---cEEEEEE-CCCEEECCEEEECcCCCCChH-HHHhh-hhhcCCCcEEECccccCCC
Confidence 899999999999998753 1334555 556899999999999999998 87776 7777889999999999999
Q ss_pred CceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcC
Q psy1545 305 SNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTL 384 (454)
Q Consensus 305 ~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~ 384 (454)
|+|||+|||+..+....+.+..+++++.|..||++||+||++... .++......+..+++++++.+|+++.++.
T Consensus 274 ~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~------~~~~~~~~~~~~~~~~~~~~vG~~~~~a~ 347 (447)
T 1nhp_A 274 PDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPVK------PFPGVQGSSGLAVFDYKFASTGINEVMAQ 347 (447)
T ss_dssp TTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCC------CCCCBCCCEEEEETTEEEEEEECCHHHHH
T ss_pred CCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCCC------CCCCccccEEEEECCeeeEEecCCHHHHH
Confidence 999999999975433222223357899999999999999997421 11111122346778889999999886654
Q ss_pred CCC--ceEE-Eee--------cCCccEEEEEEE--CCeEEEEEEEcCCc---hHHHHHHHHhcCCCcchhhhhc--cCCC
Q psy1545 385 END--YEIL-LRV--------TRGEEYIKLVMK--DGRMQGAVLIGETE---IEEMCENLILNQLDLTDIADDL--LNPN 446 (454)
Q Consensus 385 ~~~--~~~~-~~~--------~~~~~~~k~~~~--~~~i~G~~~~g~~~---~~~~~~~~i~~~~~~~~~~~~~--~~~~ 446 (454)
..+ +... +.. ....+|+|++++ +++|+|+|++|+.. .++.++.+|++++|++++.+.. .||+
T Consensus 348 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt 427 (447)
T 1nhp_A 348 KLGKETKAVTVVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPA 427 (447)
T ss_dssp HHTCCCEEEEEEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTT
T ss_pred HcCCceEEEEEEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCC
Confidence 222 2211 111 123579999994 79999999999983 5788999999999999997653 4555
Q ss_pred CC
Q psy1545 447 ID 448 (454)
Q Consensus 447 ~~ 448 (454)
++
T Consensus 428 ~~ 429 (447)
T 1nhp_A 428 FD 429 (447)
T ss_dssp TC
T ss_pred CC
Confidence 44
No 14
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=2.3e-51 Score=406.52 Aligned_cols=384 Identities=21% Similarity=0.296 Sum_probs=303.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccccccc-ccchhhhHHHHHhc-CcEEEcc-eEEE
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLS-DITVEETDANKFEG-LCTVIVD-TVAA 78 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~i~~~~~-~v~~ 78 (454)
++||+|||||+||+++|..|++.++..+|+|||+++..++ ..+.++..+. .........+.+.+ +++++.+ +|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~ 84 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPY--DRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQS 84 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCB--CSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcc--cCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEE
Confidence 5799999999999999999999954447999999886542 2222221110 00000000113444 8999877 5999
Q ss_pred EeCcccEEEeccCcEEEecEEEEecCCCCCCCCC-C---CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHh
Q psy1545 79 IDPRVNCVITEKQNRIKYKTLCICTGASPRKIWY-S---PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHEL 154 (454)
Q Consensus 79 i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~-~---~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l 154 (454)
++++.+.|.+.+++.+.||+||+|||++|+.|++ + ++++.+++.+++.++.+.+..+++++|||+|++|+|+|..+
T Consensus 85 i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l 164 (408)
T 2gqw_A 85 FDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATA 164 (408)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHH
T ss_pred EECCCCEEEECCCCEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHH
Confidence 9998889999888899999999999999998887 6 35777778888888877666689999999999999999998
Q ss_pred c--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceE
Q psy1545 155 S--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKIT 232 (454)
Q Consensus 155 ~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~ 232 (454)
. |.+|+++++.++++++.+++++...+.+.+.+ .||+
T Consensus 165 ~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~-----------------------------------------~GV~ 203 (408)
T 2gqw_A 165 RTAGVHVSLVETQPRLMSRAAPATLADFVARYHAA-----------------------------------------QGVD 203 (408)
T ss_dssp HHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHH-----------------------------------------TTCE
T ss_pred HhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHH-----------------------------------------cCcE
Confidence 6 99999999999998876788888888777755 8999
Q ss_pred EEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCceeecCc
Q psy1545 233 IEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNVYAAGD 312 (454)
Q Consensus 233 i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD 312 (454)
+++++.+++++ ++ .+.+++|+++++|.|++|+|++|+.+ +++..+++++ +| |.||+++||+.|+|||+||
T Consensus 204 i~~~~~v~~i~-~~------~v~~~~g~~i~~D~vi~a~G~~p~~~-l~~~~gl~~~-~g-i~Vd~~~~t~~~~IyA~GD 273 (408)
T 2gqw_A 204 LRFERSVTGSV-DG------VVLLDDGTRIAADMVVVGIGVLANDA-LARAAGLACD-DG-IFVDAYGRTTCPDVYALGD 273 (408)
T ss_dssp EEESCCEEEEE-TT------EEEETTSCEEECSEEEECSCEEECCH-HHHHHTCCBS-SS-EECCTTCBCSSTTEEECGG
T ss_pred EEeCCEEEEEE-CC------EEEECCCCEEEcCEEEECcCCCccHH-HHHhCCCCCC-CC-EEECCCCccCCCCEEEEEE
Confidence 99999999998 32 47788999999999999999999998 8887788875 45 9999999999999999999
Q ss_pred ccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCCceEEE
Q psy1545 313 VCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDYEILL 392 (454)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 392 (454)
|+..+....+.+...++++.|..||++||+||++... . .|+. +.+.++++++.+++++|. +... +..+
T Consensus 274 ~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~--~---~~~~-~p~~~~~~~~~~~~~~G~-~~~~-----~~~~ 341 (408)
T 2gqw_A 274 VTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTA--P---GYAE-LPWYWSDQGALRIQVAGL-ASGD-----EEIV 341 (408)
T ss_dssp GEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS--C---CCCC-CCEEEEEETTEEEEEEEC-SCCS-----EEEE
T ss_pred EEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCC--C---cCCC-CCeEEEEECCceEEEECC-CCCC-----EEEE
Confidence 9986533223222345789999999999999997532 0 2222 223467889999999998 3211 2233
Q ss_pred eecC---CccEEEEEEECCeEEEEEEEcCCchHHHHHHHHhcCCCcchhhhhccCCCCCCCCC
Q psy1545 393 RVTR---GEEYIKLVMKDGRMQGAVLIGETEIEEMCENLILNQLDLTDIADDLLNPNIDIDDY 452 (454)
Q Consensus 393 ~~~~---~~~~~k~~~~~~~i~G~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
+.++ ..+|.+++.++++|+|++++|.......+..+|+++++++. ..|.+|+++++++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~l~G~~~~g~~~~~~~~~~~i~~~~~~~~--~~l~~~~~~~~~~ 402 (408)
T 2gqw_A 342 RGEVSLDAPKFTLIELQKGRIVGATCVNNARDFAPLRRLLAVGAKPDR--AALADPATDLRKL 402 (408)
T ss_dssp ESCCCSSSCCEEEEEEETTEEEEEEEESCHHHHHHHHHHHHTTCCCCH--HHHHCTTCCHHHH
T ss_pred EccCCCCCCeEEEEEEeCCEEEEEEEECChHHHHHHHHHHHCCCCCCh--HHhcCCCCCHHHH
Confidence 3232 35688888899999999999999888999999999999988 5789999998765
No 15
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=2.5e-50 Score=407.46 Aligned_cols=393 Identities=22% Similarity=0.320 Sum_probs=299.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccc-cccc-ccccc-ccchhhhHHHHH-hc-CcEEEc-ceE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTK-TVPV-TKLLS-DITVEETDANKF-EG-LCTVIV-DTV 76 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~-~~~~-~~~~~-~~~~~~~~~~~~-~~-~i~~~~-~~v 76 (454)
+||+|||||+||++||..|++.+++.+|+|||+++..++... .+.+ ..... ..++.....+.+ .. +++++. .+|
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 599999999999999999999767899999999987543211 1111 11111 112222234445 34 899886 489
Q ss_pred EEEeCcccEEEecc---Cc--EEEecEEEEecCCCCCCCCCC----CceeeeeccchHHHHHHHhh--cCCeEEEEcCch
Q psy1545 77 AAIDPRVNCVITEK---QN--RIKYKTLCICTGASPRKIWYS----PHVITIRDTDSVAVLQEKLK--SAKKIVVIGNGG 145 (454)
Q Consensus 77 ~~i~~~~~~v~~~~---g~--~i~~d~lviAtG~~p~~~~~~----~~~~~~~~~~~~~~l~~~~~--~~~~vvVvG~G~ 145 (454)
+.++.+.+.+.+.+ |+ ++.||+||+|||++|+.|+++ ++++.+.+.+++.++.+.+. .+++++|||+|+
T Consensus 117 ~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ 196 (480)
T 3cgb_A 117 TKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGA 196 (480)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHH
T ss_pred EEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCH
Confidence 99998888777653 65 799999999999999988876 34666677888888877665 689999999999
Q ss_pred hHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccc
Q psy1545 146 IATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLH 223 (454)
Q Consensus 146 ~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 223 (454)
+|+|+|..+. |.+|+++++.+++++ .+++++.+.+.+.+.+
T Consensus 197 ~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~------------------------------------ 239 (480)
T 3cgb_A 197 IGLEMAETFVELGKKVRMIERNDHIGT-IYDGDMAEYIYKEADK------------------------------------ 239 (480)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGTTS-SSCHHHHHHHHHHHHH------------------------------------
T ss_pred HHHHHHHHHHhcCCeEEEEEeCCchhh-cCCHHHHHHHHHHHHH------------------------------------
Confidence 9999999986 999999999998887 3677777777777654
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTS 303 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~ 303 (454)
.||++++++.|++++.++ ....+.++ +.++++|.|++|+|++|+.+ +++..|++++++|+|.||+++||+
T Consensus 240 -----~Gv~i~~~~~v~~i~~~~---~v~~v~~~-~~~i~~D~vi~a~G~~p~~~-~l~~~g~~~~~~G~I~Vd~~~~ts 309 (480)
T 3cgb_A 240 -----HHIEILTNENVKAFKGNE---RVEAVETD-KGTYKADLVLVSVGVKPNTD-FLEGTNIRTNHKGAIEVNAYMQTN 309 (480)
T ss_dssp -----TTCEEECSCCEEEEEESS---BEEEEEET-TEEEECSEEEECSCEEESCG-GGTTSCCCBCTTSCBCCCTTSBCS
T ss_pred -----cCcEEEcCCEEEEEEcCC---cEEEEEEC-CCEEEcCEEEECcCCCcChH-HHHhCCcccCCCCCEEECCCccCC
Confidence 899999999999998753 13345554 45899999999999999998 888888998888999999999999
Q ss_pred cCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCc
Q psy1545 304 ISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQT 383 (454)
Q Consensus 304 ~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~ 383 (454)
.|+|||+|||+..+....+.+..+++++.|..||++||+||++... .++......+..+++.+++.+|+++.++
T Consensus 310 ~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~------~~~~~~~~~~~~~~~~~~~~vG~~~~~a 383 (480)
T 3cgb_A 310 VQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRR------AFKGTLGTGIIKFMNLTLARTGLNEKEA 383 (480)
T ss_dssp STTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCC------CCCCBCCCEEEEETTEEEEEEECCHHHH
T ss_pred CCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCCc------cCCCccceeEEEECCcEEEEeCCCHHHH
Confidence 9999999999976433323323356899999999999999997421 1211112235677788999999988765
Q ss_pred CCCC--ceEE-Eee--------cCCccEEEEEE--ECCeEEEEEEEcCCc---hHHHHHHHHhcCCCcchhhhhc--cCC
Q psy1545 384 LEND--YEIL-LRV--------TRGEEYIKLVM--KDGRMQGAVLIGETE---IEEMCENLILNQLDLTDIADDL--LNP 445 (454)
Q Consensus 384 ~~~~--~~~~-~~~--------~~~~~~~k~~~--~~~~i~G~~~~g~~~---~~~~~~~~i~~~~~~~~~~~~~--~~~ 445 (454)
...+ +... +.. ....+|+|+++ ++++|+|+|++|+.+ .++.++.+|++++|++++.+.. .+|
T Consensus 384 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~P 463 (480)
T 3cgb_A 384 KGLHIPYKTVKVDSTNMAGYYPNAKPLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVDLSYAP 463 (480)
T ss_dssp HHTTCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCT
T ss_pred HHcCCceEEEEEecCCcccccCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcccccCC
Confidence 4322 2221 111 12357999999 489999999999983 5788999999999999998754 455
Q ss_pred CCC
Q psy1545 446 NID 448 (454)
Q Consensus 446 ~~~ 448 (454)
+++
T Consensus 464 t~~ 466 (480)
T 3cgb_A 464 PYN 466 (480)
T ss_dssp TTC
T ss_pred CCC
Confidence 544
No 16
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.4e-51 Score=417.10 Aligned_cols=384 Identities=18% Similarity=0.238 Sum_probs=288.9
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCC-CCeEEEECCCCccccccccccccc-------------------ccc------c
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHP-GESIGLVTPSGIVKAVTKTVPVTK-------------------LLS------D 54 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~-g~~v~lie~~~~~~~~~~~~~~~~-------------------~~~------~ 54 (454)
|++||+|||||++|++||..|++..+ |.+|+|||+++..+.+.++...+. .+. .
T Consensus 1 M~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 1 MVTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCCcCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 78999999999999999999999866 889999999984333322211000 000 0
Q ss_pred cchh--------------hhHHHHHhc-CcEEEcceEEEEeC------cccEEEeccCc--EEEecEEEEecCCCCCCCC
Q psy1545 55 ITVE--------------ETDANKFEG-LCTVIVDTVAAIDP------RVNCVITEKQN--RIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 55 ~~~~--------------~~~~~~~~~-~i~~~~~~v~~i~~------~~~~v~~~~g~--~i~~d~lviAtG~~p~~~~ 111 (454)
.++. ....+.+.+ +++++.+++.++++ ....|...+|+ .+.||+||+|||++|+.|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p~ 160 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILP 160 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCCG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCC
Confidence 1111 011233334 89999888988887 44456556676 7999999999999998887
Q ss_pred CC-CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhcc
Q psy1545 112 YS-PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKT 188 (454)
Q Consensus 112 ~~-~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~ 188 (454)
++ .....+.+..++..+.. .+++++|||+|++|+|+|..+. |.+|+++++.+++++. +++++...+.+.+.+
T Consensus 161 i~g~~~~~v~~~~~~~~~~~---~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~- 235 (499)
T 1xdi_A 161 SAQPDGERILTWRQLYDLDA---LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-EDADAALVLEESFAE- 235 (499)
T ss_dssp GGCCCSSSEEEGGGGGGCSS---CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-SSHHHHHHHHHHHHH-
T ss_pred CCCCCcCcEEehhHhhhhhc---cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHH-
Confidence 76 11122345555554432 3799999999999999999986 9999999999999886 788888888777755
Q ss_pred CCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEE
Q psy1545 189 NTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVV 268 (454)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi 268 (454)
.||++++++.|++++.+++ .+.+.+.+|+++++|.||
T Consensus 236 ----------------------------------------~GV~i~~~~~V~~i~~~~~---~v~v~~~~g~~i~aD~Vv 272 (499)
T 1xdi_A 236 ----------------------------------------RGVRLFKNARAASVTRTGA---GVLVTMTDGRTVEGSHAL 272 (499)
T ss_dssp ----------------------------------------TTCEEETTCCEEEEEECSS---SEEEEETTSCEEEESEEE
T ss_pred ----------------------------------------CCCEEEeCCEEEEEEEeCC---EEEEEECCCcEEEcCEEE
Confidence 8999999999999987653 366778888899999999
Q ss_pred EeeccCcCcccc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcC
Q psy1545 269 SAIGVVPNSNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVG 346 (454)
Q Consensus 269 ~a~G~~p~~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 346 (454)
+|+|++|+.+ + ++..|++++++|+|.||+++||+.|+|||+|||+..+ ++++.|..||++||.||++
T Consensus 273 ~a~G~~p~~~-~l~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 273 MTIGSVPNTS-GLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLL----------PLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp ECCCEEECCS-SSCTTTTTCCCBTTTBCCCCSSSBCSSTTEEECSGGGTSC----------SCHHHHHHHHHHHHHHHTT
T ss_pred ECCCCCcCCC-cCCchhcCceECCCCCEEECCCcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHhcC
Confidence 9999999998 7 6777898888899999999999999999999998743 5788999999999999997
Q ss_pred CCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCCc--eEEEe----------ecCCccEEEEEEE--CCeEEE
Q psy1545 347 AVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDY--EILLR----------VTRGEEYIKLVMK--DGRMQG 412 (454)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~--~~~~~----------~~~~~~~~k~~~~--~~~i~G 412 (454)
.......+..+|+.+ +++.+++++|+++.++...++ .+... .....+|+|++++ +++|+|
T Consensus 342 ~~~~~~~~~~~p~~~------~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG 415 (499)
T 1xdi_A 342 EGVSPIRLRTVAATV------FTRPEIAAVGVPQSVIDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIG 415 (499)
T ss_dssp CCCCCCCGGGCEEEE------CSSSEEEEEESCHHHHHHTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEE
T ss_pred CCCccCCCCCCcEEE------EecCCceEeCCCHHHHHhCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEE
Confidence 421111122334433 445699999999876543333 22211 1235689999995 799999
Q ss_pred EEEEcCCc--hHHHHHHHHhcCCCcchhhhhccCCCCCCC
Q psy1545 413 AVLIGETE--IEEMCENLILNQLDLTDIADDLLNPNIDID 450 (454)
Q Consensus 413 ~~~~g~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 450 (454)
+|++|+.. .++.++.+|++++|++++.+. .++.+++.
T Consensus 416 ~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~-~~~~Pt~~ 454 (499)
T 1xdi_A 416 GVVVAPIASELILPIAVAVQNRITVNELAQT-LAVYPSLS 454 (499)
T ss_dssp EEEEETTHHHHHHHHHHHHHHTCBHHHHHTS-BCCSSSTH
T ss_pred EEEECCchHHHHHHHHHHHHCCCCHHHHhcc-cccCCCch
Confidence 99999984 468999999999999999765 44444443
No 17
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=3.8e-50 Score=400.46 Aligned_cols=390 Identities=18% Similarity=0.288 Sum_probs=307.2
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccccccc-----ccchhhhHHHHHhc-CcEEEcc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLS-----DITVEETDANKFEG-LCTVIVD 74 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~i~~~~~ 74 (454)
|++||+|||||+||+++|..|++.+...+|+|||+++...+ ..+.++..+. ...+.....+.+.+ +++++.+
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~ 80 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPH--HLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGG 80 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCB--CSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCC--cCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeC
Confidence 35899999999999999999999844448999999876542 2222222111 01111122344555 9999876
Q ss_pred -eEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC----Cc---eeeeeccchHHHHHHHhhcCCeEEEEcCchh
Q psy1545 75 -TVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS----PH---VITIRDTDSVAVLQEKLKSAKKIVVIGNGGI 146 (454)
Q Consensus 75 -~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~----~~---~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~ 146 (454)
+|+.+++..+.|.+.+|+.+.||+||+|||++|+.|+++ .+ ++.+++.+++..+.+.+..+++++|||+|++
T Consensus 81 ~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~ 160 (431)
T 1q1r_A 81 TQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYI 160 (431)
T ss_dssp CCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHH
T ss_pred CEEEEEECCCCEEEECCCCEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHH
Confidence 799999988899998888999999999999999988876 23 6667788888888877767999999999999
Q ss_pred HHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcccccccccc
Q psy1545 147 ATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHG 224 (454)
Q Consensus 147 g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 224 (454)
|+|+|..+. |.+|+++++.++++++.+++++.+.+.+.+.+
T Consensus 161 g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~------------------------------------- 203 (431)
T 1q1r_A 161 GLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHRE------------------------------------- 203 (431)
T ss_dssp HHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHH-------------------------------------
T ss_pred HHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHh-------------------------------------
Confidence 999999986 99999999999998876788888877777755
Q ss_pred CccCCceEEEeCceEEEEEc--CCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEecccccc
Q psy1545 225 SSRDTKITIEYSCEVERIVD--SEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQT 302 (454)
Q Consensus 225 ~l~~~gv~i~~~~~v~~i~~--~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t 302 (454)
.||++++++.+++++. .+ +....+.+++|+++++|.||+|+|++|+.+ +++..+++++ + +|.||+++||
T Consensus 204 ----~GV~i~~~~~v~~i~~~~~~--~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~-l~~~~gl~~~-~-gi~Vd~~~~t 274 (431)
T 1q1r_A 204 ----AGVDIRTGTQVCGFEMSTDQ--QKVTAVLCEDGTRLPADLVIAGIGLIPNCE-LASAAGLQVD-N-GIVINEHMQT 274 (431)
T ss_dssp ----HTCEEECSCCEEEEEECTTT--CCEEEEEETTSCEEECSEEEECCCEEECCH-HHHHTTCCBS-S-SEECCTTSBC
T ss_pred ----CCeEEEeCCEEEEEEeccCC--CcEEEEEeCCCCEEEcCEEEECCCCCcCcc-hhhccCCCCC-C-CEEECCCccc
Confidence 8999999999999986 33 224468888999999999999999999998 8888888874 4 4999999999
Q ss_pred ccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCC
Q psy1545 303 SISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQ 382 (454)
Q Consensus 303 ~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~ 382 (454)
+.|+|||+|||+..+....+.+....+++.|..||++||+||++... .+...|+ .++++++.++..+|.++..
T Consensus 275 s~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p~----~~~~~~~~~~~~~G~~~~~ 347 (431)
T 1q1r_A 275 SDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVP---RDEAAPW----FWSDQYEIGLKMVGLSEGY 347 (431)
T ss_dssp SSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCCC---CCCCCCE----EEEEETTEEEEEEECCTTC
T ss_pred CCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCCC---CCCCCCe----EEEEECCceEEEEeCCCCC
Confidence 99999999999986533323333345789999999999999997532 1222222 3567889999999987632
Q ss_pred cCCCCceEEEeecC-CccEEEEEEECCeEEEEEEEcCCchHHHHHHHHhcCCCcchhhhhccCCCCCCCCC
Q psy1545 383 TLENDYEILLRVTR-GEEYIKLVMKDGRMQGAVLIGETEIEEMCENLILNQLDLTDIADDLLNPNIDIDDY 452 (454)
Q Consensus 383 ~~~~~~~~~~~~~~-~~~~~k~~~~~~~i~G~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
. +..++.++ ...|++++.++++|+|++++|.......+..+|..+.+++. +.|.+|.++++++
T Consensus 348 ~-----~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~~~~~~~~~~~i~~~~~~~~--~~l~~~~~~~~~~ 411 (431)
T 1q1r_A 348 D-----RIIVRGSLAQPDFSVFYLQGDRVLAVDTVNRPVEFNQSKQIITDRLPVEP--NLLGDESVPLKEI 411 (431)
T ss_dssp S-----EEEEEEETTTTEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHTTCCCCH--HHHTCTTSCHHHH
T ss_pred C-----EEEEEccCCCCeEEEEEEeCCEEEEEEEECChHHHHHHHHHHHCCCCCCH--HHhhCCCCCHHHH
Confidence 1 22333333 34688877799999999999999889999999999999987 6889999998765
No 18
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=7e-51 Score=410.30 Aligned_cols=383 Identities=21% Similarity=0.238 Sum_probs=284.3
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc--------------------cc---cccch
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK--------------------LL---SDITV 57 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~--------------------~~---~~~~~ 57 (454)
+++||+|||||+||+++|..|++. |.+|+|||++...+.+.+....+. .+ ...++
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~--G~~V~liE~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQL--GLSTAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDY 79 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCH
Confidence 058999999999999999999998 899999999854333222110000 00 00011
Q ss_pred hh--------------hHHHHHhc-CcEEEcceEEEEeCcccEEEeccC--cEEEecEEEEecCCCCCCCCCCCceeeee
Q psy1545 58 EE--------------TDANKFEG-LCTVIVDTVAAIDPRVNCVITEKQ--NRIKYKTLCICTGASPRKIWYSPHVITIR 120 (454)
Q Consensus 58 ~~--------------~~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lviAtG~~p~~~~~~~~~~~~~ 120 (454)
.. ...+.+.+ +++++.+.+..++.+...|.+.+| +++.||+||+|||++|+.|++++.-..+.
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~~~~~ 159 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVV 159 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCBTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCceEE
Confidence 10 01223334 899998877777666556666667 68999999999999998887662111144
Q ss_pred ccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhh
Q psy1545 121 DTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFK 198 (454)
Q Consensus 121 ~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~ 198 (454)
+.+++..+.+ .+++++|||+|++|+|+|..+. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 160 ~~~~~~~~~~---~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~----------- 224 (464)
T 2a8x_A 160 TYEEQILSRE---LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-EDADVSKEIEKQFKK----------- 224 (464)
T ss_dssp CHHHHHTCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH-----------
T ss_pred ecHHHhhccc---cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHH-----------
Confidence 5555554332 4899999999999999999986 9999999999999884 788888888777755
Q ss_pred hcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEec-CC--cEEecCEEEEeeccCc
Q psy1545 199 RMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT-NG--HTHACDIVVSAIGVVP 275 (454)
Q Consensus 199 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~-~g--~~~~~D~vi~a~G~~p 275 (454)
.||++++++.+++++.+++ .+.+.++ +| +++++|.|++|+|++|
T Consensus 225 ------------------------------~gv~i~~~~~v~~i~~~~~---~~~v~~~~~g~~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 225 ------------------------------LGVTILTATKVESIADGGS---QVTVTVTKDGVAQELKAEKVLQAIGFAP 271 (464)
T ss_dssp ------------------------------HTCEEECSCEEEEEEECSS---CEEEEEESSSCEEEEEESEEEECSCEEE
T ss_pred ------------------------------cCCEEEeCcEEEEEEEcCC---eEEEEEEcCCceEEEEcCEEEECCCCCc
Confidence 8999999999999987652 3556665 66 6799999999999999
Q ss_pred Ccccc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCC-c
Q psy1545 276 NSNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNE-P 352 (454)
Q Consensus 276 ~~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~-~ 352 (454)
+.+ + ++..+++++++|+|.||+++||+.|+|||+|||+..+ ++++.|..||++||+||++..... .
T Consensus 272 ~~~-~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~ 340 (464)
T 2a8x_A 272 NVE-GYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDVNGLL----------QLAHVAEAQGVVAAETIAGAETLTLG 340 (464)
T ss_dssp CCS-SSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEECGGGGCSS----------CSHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred cCC-CCCchhcCCccCCCCCEeECcCCccCCCCEEEeECcCCCc----------cCHHHHHHHHHHHHHHhcCCCCcccC
Confidence 998 6 5566788887899999999999999999999999743 578899999999999999731111 1
Q ss_pred ceeccceeeeeeeeeecCeEEEEeecccCCcCCCC--ceEEEe----------ecCCccEEEEEEE--CCeEEEEEEEcC
Q psy1545 353 VIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEND--YEILLR----------VTRGEEYIKLVMK--DGRMQGAVLIGE 418 (454)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~--~~~~~~----------~~~~~~~~k~~~~--~~~i~G~~~~g~ 418 (454)
.+...|+.+ +++.+++++|+++.++...+ +.+... .....+|+|++++ +++|+|+|++|+
T Consensus 341 ~~~~~p~~~------~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~ 414 (464)
T 2a8x_A 341 DHRMLPRAT------FCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGH 414 (464)
T ss_dssp CGGGSCEEE------CSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEET
T ss_pred CCCCCCEEE------ECCCCeEEEcCCHHHHHhcCCCEEEEEEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECc
Confidence 122234433 44559999999987764333 322211 1235689999994 899999999999
Q ss_pred C--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 419 T--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 419 ~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
. +.++.++.+|++++|++++.+.+ ++++++.+
T Consensus 415 ~a~e~i~~~~~ai~~~~~~~~l~~~~-~~~Pt~~e 448 (464)
T 2a8x_A 415 DVAELLPELTLAQRWDLTASELARNV-HTHPTMSE 448 (464)
T ss_dssp TGGGGHHHHHHHHHTTCBHHHHTTSC-CCTTCTTH
T ss_pred CHHHHHHHHHHHHHCCCCHHHHhhCc-cCCCChHH
Confidence 8 46899999999999999997653 45555443
No 19
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.3e-50 Score=407.29 Aligned_cols=382 Identities=19% Similarity=0.261 Sum_probs=284.3
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc-------------------cc----cccch
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK-------------------LL----SDITV 57 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~-------------------~~----~~~~~ 57 (454)
|++||+|||||+||++||..|++. |.+|+|||++...+.+.++...+. .. ...++
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQL--GQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDF 79 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 368999999999999999999998 899999999854433322211000 00 00111
Q ss_pred h--------------hhHHHHHhc-CcEEEcceEEEEeCcccEEEeccC-cEEEecEEEEecCCCCCCCCCCCceeeeec
Q psy1545 58 E--------------ETDANKFEG-LCTVIVDTVAAIDPRVNCVITEKQ-NRIKYKTLCICTGASPRKIWYSPHVITIRD 121 (454)
Q Consensus 58 ~--------------~~~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g-~~i~~d~lviAtG~~p~~~~~~~~~~~~~~ 121 (454)
. ......+.+ +++++.+++..++++...|.+.+| +++.||+||+|||++|+.|++++.-..+.+
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g~~~~v~~ 159 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNRILD 159 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBCCCSSEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCCccceEec
Confidence 0 001223344 899998888888877667776666 689999999999999988877621011445
Q ss_pred cchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhh
Q psy1545 122 TDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKR 199 (454)
Q Consensus 122 ~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~ 199 (454)
..++..+. ..+++++|||+|++|+|+|..|. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 160 ~~~~~~~~---~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~------------ 223 (455)
T 1ebd_A 160 STGALNLG---EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-FEKQMAAIIKKRLKK------------ 223 (455)
T ss_dssp HHHHHTCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHH------------
T ss_pred HHHHhccc---cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-cCHHHHHHHHHHHHH------------
Confidence 55554432 24899999999999999999986 9999999999998874 677777777777755
Q ss_pred cccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEec---CCcEEecCEEEEeeccCcC
Q psy1545 200 MRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT---NGHTHACDIVVSAIGVVPN 276 (454)
Q Consensus 200 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~---~g~~~~~D~vi~a~G~~p~ 276 (454)
.||++++++.|++++.+++ .+.+.++ +++++++|.|++|+|++|+
T Consensus 224 -----------------------------~gv~i~~~~~v~~i~~~~~---~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 224 -----------------------------KGVEVVTNALAKGAEERED---GVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp -----------------------------TTCEEEESEEEEEEEEETT---EEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred -----------------------------CCCEEEeCCEEEEEEEeCC---eEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 8999999999999987542 3555554 4578999999999999999
Q ss_pred cccc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcce
Q psy1545 277 SNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVI 354 (454)
Q Consensus 277 ~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~ 354 (454)
.+ + ++..+++++++|+|.||+++||+.|+|||+|||+..+ ++++.|..||+.||+||++... ...+
T Consensus 272 ~~-~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~-~~~~ 339 (455)
T 1ebd_A 272 TD-ELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGP----------ALAHKASYEGKVAAEAIAGHPS-AVDY 339 (455)
T ss_dssp CS-SSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTSCCC-CCCC
T ss_pred cC-cCChhhcCCccCCCCCEeeCCCcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHHcCCCc-cCCC
Confidence 98 6 5677888888899999999999999999999998743 5788999999999999997421 1111
Q ss_pred eccceeeeeeeeeecCeEEEEeecccCCcCCCC--ceEEEe----------ecCCccEEEEEEE--CCeEEEEEEEcCC-
Q psy1545 355 QDFSFEMFTHMTKFFGYKVILLGLFNGQTLEND--YEILLR----------VTRGEEYIKLVMK--DGRMQGAVLIGET- 419 (454)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~--~~~~~~----------~~~~~~~~k~~~~--~~~i~G~~~~g~~- 419 (454)
...|+. .+++.+++++|+++.++...+ +.+... .....+|+|++++ +++|+|+|++|+.
T Consensus 340 ~~~p~~------~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a 413 (455)
T 1ebd_A 340 VAIPAV------VFSDPECASVGYFEQQAKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNA 413 (455)
T ss_dssp SCCCEE------ECSSSCEEEEECCHHHHHTTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTH
T ss_pred CCCCEE------EECCCceEEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCH
Confidence 122333 445569999999987765433 322211 1235689999994 8999999999998
Q ss_pred -chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 420 -EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 420 -~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+.++.++.+|++++|++++.+. .++++++.+
T Consensus 414 ~e~i~~~~~ai~~~~~~~~l~~~-~~~~Pt~~e 445 (455)
T 1ebd_A 414 SDMIAELGLAIEAGMTAEDIALT-IHAHPTLGE 445 (455)
T ss_dssp HHHHHHHHHHHHHTCBHHHHHHS-CCCTTSSTH
T ss_pred HHHHHHHHHHHHCCCCHHHHhhc-ccCCCCHHH
Confidence 4689999999999999999765 444444443
No 20
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-51 Score=411.35 Aligned_cols=383 Identities=16% Similarity=0.202 Sum_probs=288.3
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccc---------------------cc--------c
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVT---------------------KL--------L 52 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~---------------------~~--------~ 52 (454)
++||+|||||+||++||..|++. |.+|+|||+++..+.|.+..+.+ .. .
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~--g~~V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASY--GAKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--SCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred cCCEEEEcCCHHHHHHHHHHHHC--CCcEEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 48999999999999999999998 99999999986554433221100 00 0
Q ss_pred cccchhh--------------hHHHHHhc-CcEEEcceEEEEeCcccEEEeccCc--EEEecEEEEecCCCCCCC-CCCC
Q psy1545 53 SDITVEE--------------TDANKFEG-LCTVIVDTVAAIDPRVNCVITEKQN--RIKYKTLCICTGASPRKI-WYSP 114 (454)
Q Consensus 53 ~~~~~~~--------------~~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g~--~i~~d~lviAtG~~p~~~-~~~~ 114 (454)
...++.. .....+.+ +++++.+++..+++....+.+.+|+ .+.||+||||||++|+.| +++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i~g 168 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPG 168 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTSTT
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCCCC
Confidence 0111110 01122333 8999988888888776667666776 899999999999999988 7772
Q ss_pred ceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCC
Q psy1545 115 HVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAK 192 (454)
Q Consensus 115 ~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~ 192 (454)
.- ...+.+++..+. ..+++++|||+|++|+|+|..+. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 169 ~~-~~~~~~~~~~l~---~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~----- 238 (479)
T 2hqm_A 169 FE-LGTDSDGFFRLE---EQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDECIQNTITDHYVK----- 238 (479)
T ss_dssp GG-GSBCHHHHHHCS---SCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHH-----
T ss_pred cc-cccchHHHhccc---ccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-cCHHHHHHHHHHHHh-----
Confidence 21 123444444432 24899999999999999999986 9999999999998875 788888888777755
Q ss_pred hhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCC-cEEecCEEEEee
Q psy1545 193 PETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNG-HTHACDIVVSAI 271 (454)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g-~~~~~D~vi~a~ 271 (454)
.||++++++.|++++.+++ +..+.+.+++| +++++|.|++|+
T Consensus 239 ------------------------------------~Gv~i~~~~~v~~i~~~~~-~~~~~v~~~~G~~~i~~D~vv~a~ 281 (479)
T 2hqm_A 239 ------------------------------------EGINVHKLSKIVKVEKNVE-TDKLKIHMNDSKSIDDVDELIWTI 281 (479)
T ss_dssp ------------------------------------HTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEECS
T ss_pred ------------------------------------CCeEEEeCCEEEEEEEcCC-CcEEEEEECCCcEEEEcCEEEECC
Confidence 8999999999999987542 11367888899 889999999999
Q ss_pred ccCcCcccc-cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCC--
Q psy1545 272 GVVPNSNIQ-VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAV-- 348 (454)
Q Consensus 272 G~~p~~~~~-~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~-- 348 (454)
|++|+.. + ++..|++++++|+|.||+++||+.|+|||+|||++. +++++.|..||++||.||++..
T Consensus 282 G~~p~~~-l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~ 350 (479)
T 2hqm_A 282 GRKSHLG-MGSENVGIKLNSHDQIIADEYQNTNVPNIYSLGDVVGK----------VELTPVAIAAGRKLSNRLFGPEKF 350 (479)
T ss_dssp CEEECCC-SSGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGGTTS----------SCCHHHHHHHHHHHHHHHHSCGGG
T ss_pred CCCCccc-cChhhcCceECCCCCEeECCCCccCCCCEEEEEecCCC----------cccHHHHHHHHHHHHHHhcCCCcc
Confidence 9999996 6 678889998889999999999999999999999764 3578899999999999999753
Q ss_pred -CCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCC----CceEEEe----------ecCCccEEEEEEE--CCeEE
Q psy1545 349 -KNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN----DYEILLR----------VTRGEEYIKLVMK--DGRMQ 411 (454)
Q Consensus 349 -~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~----~~~~~~~----------~~~~~~~~k~~~~--~~~i~ 411 (454)
.....+..+|..+|+ +++++.+|+++.++... .+++... .....+|+|++++ +++|+
T Consensus 351 ~~~~~~~~~~p~~~~~------~~~~~~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~il 424 (479)
T 2hqm_A 351 RNDKLDYENVPSVIFS------HPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVV 424 (479)
T ss_dssp TTCCCCCTTCCEEECC------SSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEE
T ss_pred CcccCCCCCCCeEEEC------CCCeEEEeCCHHHHHhcCCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEE
Confidence 111112224444444 44899999998765422 1332210 1235689999994 79999
Q ss_pred EEEEEcCCc--hHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 412 GAVLIGETE--IEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 412 G~~~~g~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
|+|++|+.. .++.++.+|++++|++++.+. .++++++.+
T Consensus 425 G~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~-~~~hPt~~e 465 (479)
T 2hqm_A 425 GLHIVGDSSAEILQGFGVAIKMGATKADFDNC-VAIHPTSAE 465 (479)
T ss_dssp EEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS-CCCSSCSGG
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCHHHHhhC-cCCCCChHH
Confidence 999999873 478889999999999999765 556666655
No 21
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=8.5e-51 Score=410.09 Aligned_cols=382 Identities=18% Similarity=0.214 Sum_probs=286.8
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc-cccccccc--------------------cc-----cc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV-TKTVPVTK--------------------LL-----SD 54 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~-~~~~~~~~--------------------~~-----~~ 54 (454)
|++||+|||||+||++||..|++. |.+|+|||+++.+++. .++...+. .+ ..
T Consensus 1 ~~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (468)
T 2qae_A 1 NPYDVVVIGGGPGGYVASIKAAQL--GMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVT 78 (468)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 679999999999999999999998 8999999999655432 22111000 00 00
Q ss_pred cchhh--------------hHHHHHhc-CcEEEcceEEEEeCcccEEEeccC--cEEEecEEEEecCCCCCCCCCCC-ce
Q psy1545 55 ITVEE--------------TDANKFEG-LCTVIVDTVAAIDPRVNCVITEKQ--NRIKYKTLCICTGASPRKIWYSP-HV 116 (454)
Q Consensus 55 ~~~~~--------------~~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lviAtG~~p~~~~~~~-~~ 116 (454)
.++.. .....+.+ +++++.+++..++++...|.+.+| ..+.||+||+|||++|+.|++++ ..
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~~ 158 (468)
T 2qae_A 79 MDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDE 158 (468)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCCS
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCCc
Confidence 11110 01123334 899998888888887777777677 68999999999999998887761 11
Q ss_pred eeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHh-hccCCCCh
Q psy1545 117 ITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSI-NKTNTAKP 193 (454)
Q Consensus 117 ~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l-~~~~~~~~ 193 (454)
..+.+.+++..+.+ .+++++|||+|++|+|+|..+. |.+|+++++.+++++. +++++.+.+.+.+ .+
T Consensus 159 ~~v~t~~~~~~~~~---~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~------ 228 (468)
T 2qae_A 159 KVVLSSTGALALPR---VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-LDEDVTNALVGALAKN------ 228 (468)
T ss_dssp SSEECHHHHHTCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHH------
T ss_pred CceechHHHhhccc---CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-CCHHHHHHHHHHHhhc------
Confidence 13445555554432 4899999999999999999986 9999999999999884 7888888877777 65
Q ss_pred hhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEec--CC--cEEecCEEEE
Q psy1545 194 ETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT--NG--HTHACDIVVS 269 (454)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~--~g--~~~~~D~vi~ 269 (454)
.||+++++++|++++.+++ .+.+.++ +| +++++|.|++
T Consensus 229 -----------------------------------~gv~i~~~~~v~~i~~~~~---~~~v~~~~~~g~~~~i~~D~vv~ 270 (468)
T 2qae_A 229 -----------------------------------EKMKFMTSTKVVGGTNNGD---SVSLEVEGKNGKRETVTCEALLV 270 (468)
T ss_dssp -----------------------------------TCCEEECSCEEEEEEECSS---SEEEEEECC---EEEEEESEEEE
T ss_pred -----------------------------------CCcEEEeCCEEEEEEEcCC---eEEEEEEcCCCceEEEECCEEEE
Confidence 8999999999999987653 3556665 66 6799999999
Q ss_pred eeccCcCcccc--cCCCCceecCCCceEeccccccccCceeecCcccc-cCCccccchhhccChHHHHHHHHHHHhhhcC
Q psy1545 270 AIGVVPNSNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCT-PSWDLAKQWFQMRLWTQAKHMGTYAAKCMVG 346 (454)
Q Consensus 270 a~G~~p~~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~-~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 346 (454)
|+|++|+.+ + ++..+++++++|+|.||+++||+.|+|||+|||+. . +++++.|..||++||.||++
T Consensus 271 a~G~~p~~~-~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 271 SVGRRPFTG-GLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKG----------PMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp CSCEEECCT-TSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGBSSS----------CSCHHHHHHHHHHHHHHHTT
T ss_pred CCCcccCCC-CCCchhcCCccCCCCCEeECCCcccCCCCEEEeeccCCCC----------CccHhHHHHHHHHHHHHHcC
Confidence 999999998 6 55667888878999999999999999999999997 3 36788999999999999997
Q ss_pred CCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCC--ceEEEe----------ecCCccEEEEEEE--CCeEEE
Q psy1545 347 AVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEND--YEILLR----------VTRGEEYIKLVMK--DGRMQG 412 (454)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~--~~~~~~----------~~~~~~~~k~~~~--~~~i~G 412 (454)
... ...+..+|+. .+++.+++++|+++.++...+ +.+... .....+|+|++++ +++|+|
T Consensus 340 ~~~-~~~~~~~p~~------~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG 412 (468)
T 2qae_A 340 KPG-HVNYGVIPAV------IYTMPEVASVGKSEDELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILG 412 (468)
T ss_dssp CCC-CCCTTSCCEE------ECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEE
T ss_pred CCc-cCCCCCCCEE------EECCCceEEEeCCHHHHHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEE
Confidence 421 1111123333 345569999999987764333 322211 1235689999994 899999
Q ss_pred EEEEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 413 AVLIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 413 ~~~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+|++|+. +.++.+..+|++++|++++.+. .++++++.+
T Consensus 413 ~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~-~~~~Pt~~e 452 (468)
T 2qae_A 413 VHIVCTTAGELIGEACLAMEYGASSEDVGRT-CHAHPTMSE 452 (468)
T ss_dssp EEEEETTHHHHHHHHHHHHHTTCBHHHHHTS-CCCSSCTHH
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCHHHHhhc-ccCCCCHHH
Confidence 9999998 4689999999999999999765 445555443
No 22
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=5e-51 Score=412.45 Aligned_cols=383 Identities=20% Similarity=0.221 Sum_probs=286.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc-cccccccc---------------------ccc----cc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV-TKTVPVTK---------------------LLS----DI 55 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~-~~~~~~~~---------------------~~~----~~ 55 (454)
++||+|||||+||++||..|++. |.+|+|||+++.+++. .++...+. .+. ..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL--GFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRL 83 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCcc
Confidence 58999999999999999999998 8999999999654432 11110000 000 01
Q ss_pred chhh--------------hHHHHHhc-CcEEEcceEEEEeCcccEEEecc-C-cEEEecEEEEecCCCCCCCCCCC-cee
Q psy1545 56 TVEE--------------TDANKFEG-LCTVIVDTVAAIDPRVNCVITEK-Q-NRIKYKTLCICTGASPRKIWYSP-HVI 117 (454)
Q Consensus 56 ~~~~--------------~~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~-g-~~i~~d~lviAtG~~p~~~~~~~-~~~ 117 (454)
++.. .....+.+ +++++.+++..++++...|.+.+ + +++.||+||+|||++|+.|++++ ...
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~~~ 163 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDED 163 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCCcC
Confidence 1110 01223334 89999988888887766777666 4 57999999999999999888761 111
Q ss_pred eeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhh
Q psy1545 118 TIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPET 195 (454)
Q Consensus 118 ~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~ 195 (454)
.+.+.+++..+.+ .+++++|||+|++|+|+|..+. |.+|+++++.++++++.+++++.+.+.+.+.+
T Consensus 164 ~v~t~~~~~~~~~---~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~-------- 232 (474)
T 1zmd_A 164 TIVSSTGALSLKK---VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQK-------- 232 (474)
T ss_dssp SEECHHHHTTCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHH--------
T ss_pred cEEcHHHHhhccc---cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHH--------
Confidence 2345555544322 3799999999999999999986 99999999999998855788888888777755
Q ss_pred hhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEe-----cCCcEEecCEEEEe
Q psy1545 196 IFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL-----TNGHTHACDIVVSA 270 (454)
Q Consensus 196 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~-----~~g~~~~~D~vi~a 270 (454)
.||++++++.|++++.+++ ..+.+.+ .+++++++|.|++|
T Consensus 233 ---------------------------------~Gv~i~~~~~v~~i~~~~~--~~~~v~~~~~~~~~~~~i~~D~vv~a 277 (474)
T 1zmd_A 233 ---------------------------------QGFKFKLNTKVTGATKKSD--GKIDVSIEAASGGKAEVITCDVLLVC 277 (474)
T ss_dssp ---------------------------------TTCEEECSEEEEEEEECTT--SCEEEEEEETTSCCCEEEEESEEEEC
T ss_pred ---------------------------------CCCEEEeCceEEEEEEcCC--ceEEEEEEecCCCCceEEEcCEEEEC
Confidence 8999999999999987653 1245553 45678999999999
Q ss_pred eccCcCcccc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCC
Q psy1545 271 IGVVPNSNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAV 348 (454)
Q Consensus 271 ~G~~p~~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (454)
+|++|+.+ + ++..+++++++|+|.||+++||+.|+|||+|||+..+ ++++.|..||++||.||++..
T Consensus 278 ~G~~p~~~-~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~ 346 (474)
T 1zmd_A 278 IGRRPFTK-NLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGP----------MLAHKAEDEGIICVEGMAGGA 346 (474)
T ss_dssp SCEEECCT-TSSHHHHTCCCCTTSCCCCCTTCBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCcCCC-cCCchhcCCccCCCCCEEECcCCccCCCCEEEeeecCCCC----------ccHHHHHHHHHHHHHHhcCCC
Confidence 99999998 6 5566788888899999999999999999999998743 578899999999999999752
Q ss_pred CCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCC--CceEEEe----------ecCCccEEEEEEE--CCeEEEEE
Q psy1545 349 KNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN--DYEILLR----------VTRGEEYIKLVMK--DGRMQGAV 414 (454)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~--~~~~~~~----------~~~~~~~~k~~~~--~~~i~G~~ 414 (454)
. ...+..+|+.+ +++.+++++|+++.++... .+.+... .....+|+|++++ +++|+|+|
T Consensus 347 ~-~~~~~~~p~~~------~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~ 419 (474)
T 1zmd_A 347 V-HIDYNCVPSVI------YTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAH 419 (474)
T ss_dssp C-CCCGGGCCEEE------CSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEE
T ss_pred C-cCCCCCCCEEE------ECCCCeEEEeCCHHHHHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEE
Confidence 1 11122334443 4455999999998775433 3332211 1235689999995 89999999
Q ss_pred EEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 415 LIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 415 ~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
++|+. +.++.++.+|++++|++++.+ +.++++++.+
T Consensus 420 ~~g~~a~~~i~~~~~ai~~~~~~~~l~~-~~~~~Pt~~e 457 (474)
T 1zmd_A 420 ILGPGAGEMVNEAALALEYGASCEDIAR-VCHAHPTLSE 457 (474)
T ss_dssp EEETTHHHHHHHHHHHHHHTCBHHHHHH-SCCCTTCTHH
T ss_pred EECCCHHHHHHHHHHHHHCCCCHHHHhh-CcCCCCCHHH
Confidence 99998 458899999999999999976 4555555544
No 23
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=7.1e-51 Score=410.15 Aligned_cols=382 Identities=18% Similarity=0.195 Sum_probs=288.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccc-ccccccc------------------ccccchh----
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTK-TVPVTKL------------------LSDITVE---- 58 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~-~~~~~~~------------------~~~~~~~---- 58 (454)
++||+|||||+||++||..|++. |.+|+|||+.+.+++.+. ..+.+.. ...+++.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~--G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKA--KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQD 81 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHH
Confidence 48999999999999999999998 899999997766554322 2111100 0001110
Q ss_pred --h--------hHHH-HHhc-CcEEEcceEEEEeCcccEEEeccCcE--EEecEEEEecCCCCCCCCCCCceeeeeccch
Q psy1545 59 --E--------TDAN-KFEG-LCTVIVDTVAAIDPRVNCVITEKQNR--IKYKTLCICTGASPRKIWYSPHVITIRDTDS 124 (454)
Q Consensus 59 --~--------~~~~-~~~~-~i~~~~~~v~~i~~~~~~v~~~~g~~--i~~d~lviAtG~~p~~~~~~~~~~~~~~~~~ 124 (454)
. .... .+.+ +++++.+++..++++...|.+.+|+. +.||+||+|||++|+.|++++.- .+.+.++
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~-~~~t~~~ 160 (466)
T 3l8k_A 82 RKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVE-YCLTSDD 160 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGG-GSBCHHH
T ss_pred HHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCcc-ceEeHHH
Confidence 0 1111 2233 89999999999999888888878888 99999999999999998887211 3455566
Q ss_pred HHHHHHHh-hcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcc
Q psy1545 125 VAVLQEKL-KSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMR 201 (454)
Q Consensus 125 ~~~l~~~~-~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~ 201 (454)
+..+.+.+ ..+++++|||+|++|+|+|..+. |.+|+++++.+++++.++++++.+.+.+.+
T Consensus 161 ~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l---------------- 224 (466)
T 3l8k_A 161 IFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSIL---------------- 224 (466)
T ss_dssp HHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHH----------------
T ss_pred HHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcC----------------
Confidence 65322211 24799999999999999999986 999999999999988644777777665554
Q ss_pred cccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEec--CCc--EEecCEEEEeeccCcCc
Q psy1545 202 YNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT--NGH--THACDIVVSAIGVVPNS 277 (454)
Q Consensus 202 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~--~g~--~~~~D~vi~a~G~~p~~ 277 (454)
. |++++++.+++++..++ ..+.+.++ +|+ ++++|.|++|+|++|+.
T Consensus 225 ---------------------------~-v~i~~~~~v~~i~~~~~--~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 225 ---------------------------K-LNIKFNSPVTEVKKIKD--DEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp ---------------------------C-CCEECSCCEEEEEEEET--TEEEEEECCTTSCCEEEEESCEEECCCEEECC
T ss_pred ---------------------------E-EEEEECCEEEEEEEcCC--CcEEEEEEecCCceEEEEcCEEEECcCCCccc
Confidence 2 99999999999987541 14567777 665 89999999999999999
Q ss_pred ccc-cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCC--CCCCcce
Q psy1545 278 NIQ-VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGA--VKNEPVI 354 (454)
Q Consensus 278 ~~~-~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~--~~~~~~~ 354 (454)
+ + ++..|++++++| |.||+++||+.|+|||+|||++. +++++.|..||++||.||++. ......+
T Consensus 275 ~-l~l~~~gl~~~~~G-i~vd~~~~t~~~~Iya~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~ 342 (466)
T 3l8k_A 275 P-EGAREIGLSISKTG-IVVDETMKTNIPNVFATGDANGL----------APYYHAAVRMSIAAANNIMANGMPVDYVDV 342 (466)
T ss_dssp C-TTTGGGTCCBCSSS-BCCCTTCBCSSTTEEECGGGTCS----------CCSHHHHHHHHHHHHHHHHTTTSCCCCCCS
T ss_pred c-cchhhcCceeCCCC-EeECCCccCCCCCEEEEEecCCC----------CccHhHHHHHHHHHHHHHhCCCCCccccCC
Confidence 7 5 777889998889 99999999999999999999975 368899999999999999975 2222223
Q ss_pred eccceeeeeeeeeecCeEEEEeecccCCcCCCCc--eEEEe----------ecCCccEEEEEEE--CCeEEEEEEEcCCc
Q psy1545 355 QDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDY--EILLR----------VTRGEEYIKLVMK--DGRMQGAVLIGETE 420 (454)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~--~~~~~----------~~~~~~~~k~~~~--~~~i~G~~~~g~~~ 420 (454)
..+|+.+|+ +.+++++|+++.++...++ .+... .....+|+|++++ +++|+|+|++|+..
T Consensus 343 ~~~p~~~~~------~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a 416 (466)
T 3l8k_A 343 KSIPVTIYT------IPSLSYVGILPSKARKMGIEIVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHS 416 (466)
T ss_dssp TTSCEEECS------SSCEEEEECCHHHHHHHTCCEEEEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTH
T ss_pred CCCcEEEEC------CCCeEEecCCHHHHHhCCCCEEEEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCH
Confidence 334555554 4489999999987653333 22211 1235789999994 79999999999983
Q ss_pred --hHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 421 --IEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 421 --~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
.++.++.+|++++|++||.+. .++++++.+
T Consensus 417 ~e~i~~~~~ai~~~~t~~~l~~~-~~~~Pt~~e 448 (466)
T 3l8k_A 417 QYLINELGLAVAYGLNAKQLASF-AEQHPSTNE 448 (466)
T ss_dssp HHHHHHHHHHHHTTCBHHHHHHC-CCCTTSTTH
T ss_pred HHHHHHHHHHHHCcCCHHHHhcc-ccCCCChHH
Confidence 578999999999999999776 444555443
No 24
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.1e-49 Score=413.00 Aligned_cols=393 Identities=20% Similarity=0.288 Sum_probs=302.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccc-ccc-ccccc-cccchhhhHHHHHh-c-CcEEE-cce
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTK-TVP-VTKLL-SDITVEETDANKFE-G-LCTVI-VDT 75 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~-~~~-~~~~~-~~~~~~~~~~~~~~-~-~i~~~-~~~ 75 (454)
++||+|||||+||++||..|++.+++.+|+|||+++.+++... .+. ..... ..........+.+. + +++++ ..+
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 115 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSE 115 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEE
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 5799999999999999999999878899999999987653221 111 11111 11112223344443 3 89986 569
Q ss_pred EEEEeCcccEEEec---cCc--EEEecEEEEecCCCCCCCCCC-----CceeeeeccchHHHHHHHh--hcCCeEEEEcC
Q psy1545 76 VAAIDPRVNCVITE---KQN--RIKYKTLCICTGASPRKIWYS-----PHVITIRDTDSVAVLQEKL--KSAKKIVVIGN 143 (454)
Q Consensus 76 v~~i~~~~~~v~~~---~g~--~i~~d~lviAtG~~p~~~~~~-----~~~~~~~~~~~~~~l~~~~--~~~~~vvVvG~ 143 (454)
|+.++.+.+.+.+. +++ .+.||+||+|||++|+.|+++ .+++...+..++..+...+ ..+++++|||+
T Consensus 116 V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGg 195 (588)
T 3ics_A 116 VVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGG 195 (588)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECC
T ss_pred EEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECC
Confidence 99999988888764 455 789999999999999888776 3456666666666665544 25899999999
Q ss_pred chhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccc
Q psy1545 144 GGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVN 221 (454)
Q Consensus 144 G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 221 (454)
|++|+|+|..+. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 196 G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~---------------------------------- 240 (588)
T 3ics_A 196 GFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYEMAAYVHEHMKN---------------------------------- 240 (588)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHH----------------------------------
T ss_pred CHHHHHHHHHHHhCCCeEEEEecCCccccc-CCHHHHHHHHHHHHH----------------------------------
Confidence 999999999986 9999999999999886 788888888777755
Q ss_pred cccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccc
Q psy1545 222 LHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQ 301 (454)
Q Consensus 222 ~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~ 301 (454)
.||++++++.|++++.+++ .+.+++|+++++|.||+|+|++|+.+ +++..|++++++|+|.||+++|
T Consensus 241 -------~GV~i~~~~~v~~i~~~~~-----~v~~~~g~~i~~D~Vi~a~G~~p~~~-~l~~~g~~~~~~g~i~vd~~~~ 307 (588)
T 3ics_A 241 -------HDVELVFEDGVDALEENGA-----VVRLKSGSVIQTDMLILAIGVQPESS-LAKGAGLALGVRGTIKVNEKFQ 307 (588)
T ss_dssp -------TTCEEECSCCEEEEEGGGT-----EEEETTSCEEECSEEEECSCEEECCH-HHHHTTCCBCGGGCBCCCTTSB
T ss_pred -------cCCEEEECCeEEEEecCCC-----EEEECCCCEEEcCEEEEccCCCCChH-HHHhcCceEcCCCCEEECCccc
Confidence 8999999999999987542 47788999999999999999999998 8888889998899999999999
Q ss_pred cccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcC-CCCCCcceeccceeeeeeeeeecCeEEEEeeccc
Q psy1545 302 TSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVG-AVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFN 380 (454)
Q Consensus 302 t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~ 380 (454)
|+.|+|||+|||+..+....+.+..+++++.|..||++||+||++ ... .++..+.+...++++++++++|+++
T Consensus 308 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~------~~~~~~~~~~~~~~~~~~a~vGlte 381 (588)
T 3ics_A 308 TSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDS------LYKGTLGTSVAKVFDLTVATTGLNE 381 (588)
T ss_dssp CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSS------CCCCBCCCEEEEETTEEEEEEECCH
T ss_pred cCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCcc------ccCCcccceEEEECCeEEEEecCCH
Confidence 999999999999975443333333467899999999999999997 321 1222223334467788999999999
Q ss_pred CCcCCC--CceEEE-e--------ecCCccEEEEEE--ECCeEEEEEEEcCC---chHHHHHHHHhcCCCcchhhhhcc-
Q psy1545 381 GQTLEN--DYEILL-R--------VTRGEEYIKLVM--KDGRMQGAVLIGET---EIEEMCENLILNQLDLTDIADDLL- 443 (454)
Q Consensus 381 ~~~~~~--~~~~~~-~--------~~~~~~~~k~~~--~~~~i~G~~~~g~~---~~~~~~~~~i~~~~~~~~~~~~~~- 443 (454)
.++... .+.+.. . .....+|+|+++ ++++|||+|++|+. +.++.++.+|++++|++||.+..+
T Consensus 382 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~l~~~~~~ 461 (588)
T 3ics_A 382 KILKRLNIPYEVVHVQANSHAGYYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLDLPDLELS 461 (588)
T ss_dssp HHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTTGGGCCCC
T ss_pred HHHHHcCCCeEEEEEecCCccccCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHHhhhhhhc
Confidence 776433 232211 0 012458999999 58999999999975 358899999999999999977643
Q ss_pred -CCCCC
Q psy1545 444 -NPNID 448 (454)
Q Consensus 444 -~~~~~ 448 (454)
.|.++
T Consensus 462 ~~P~~~ 467 (588)
T 3ics_A 462 YAPPYS 467 (588)
T ss_dssp CSTTTC
T ss_pred cCCCcc
Confidence 36654
No 25
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.8e-50 Score=408.88 Aligned_cols=380 Identities=19% Similarity=0.212 Sum_probs=283.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccc-cccccccc---------------------ccc--cccch
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKA-VTKTVPVT---------------------KLL--SDITV 57 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~-~~~~~~~~---------------------~~~--~~~~~ 57 (454)
++||+|||||+||+++|..|++. |.+|+|||+++.+++ +.+....+ ... ...++
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~--G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADE--GLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDI 83 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 58999999999999999999998 899999999655432 21111000 000 00111
Q ss_pred h---h-----------hHHHHHhc-CcEEEcceEEEEeCcccEEEeccC------------cEEEecEEEEecCCCCCCC
Q psy1545 58 E---E-----------TDANKFEG-LCTVIVDTVAAIDPRVNCVITEKQ------------NRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 58 ~---~-----------~~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g------------~~i~~d~lviAtG~~p~~~ 110 (454)
. . .....+.+ +++++.+++..++.+...+.+.+| .+++||+||+|||++|+.|
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~ 163 (482)
T 1ojt_A 84 DMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKL 163 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCC
Confidence 0 0 01122333 899998877777765545554455 5799999999999999887
Q ss_pred C-CCCceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhc
Q psy1545 111 W-YSPHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINK 187 (454)
Q Consensus 111 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~ 187 (454)
+ ++... .+.+.+++..+.+ .+++++|||+|++|+|+|..|. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 164 ~~i~~~~-~v~~~~~~~~~~~---~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~ 238 (482)
T 1ojt_A 164 PFIPEDP-RIIDSSGALALKE---VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-ADRDLVKVWQKQNEY 238 (482)
T ss_dssp SSCCCCT-TEECHHHHTTCCC---CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHGG
T ss_pred CCCCccC-cEEcHHHHhcccc---cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-cCHHHHHHHHHHHHh
Confidence 7 54111 2445555544332 3899999999999999999986 9999999999999885 788888888777754
Q ss_pred cCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecC----CcEEe
Q psy1545 188 TNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTN----GHTHA 263 (454)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~----g~~~~ 263 (454)
.||++++++.+.+++.+++ .+.+.+++ |++++
T Consensus 239 -----------------------------------------~gV~i~~~~~v~~i~~~~~---~~~v~~~~~~~~g~~~~ 274 (482)
T 1ojt_A 239 -----------------------------------------RFDNIMVNTKTVAVEPKED---GVYVTFEGANAPKEPQR 274 (482)
T ss_dssp -----------------------------------------GEEEEECSCEEEEEEEETT---EEEEEEESSSCCSSCEE
T ss_pred -----------------------------------------cCCEEEECCEEEEEEEcCC---eEEEEEeccCCCceEEE
Confidence 8999999999999987543 45677776 77899
Q ss_pred cCEEEEeeccCcCcccc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHH
Q psy1545 264 CDIVVSAIGVVPNSNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAA 341 (454)
Q Consensus 264 ~D~vi~a~G~~p~~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa 341 (454)
+|.|++|+|++|+.+ + ++..+++++++|+|.||+++||+.|+|||+|||+..+ ++++.|..||++||
T Consensus 275 ~D~vv~a~G~~p~~~-~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa 343 (482)
T 1ojt_A 275 YDAVLVAAGRAPNGK-LISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQP----------MLAHKAVHEGHVAA 343 (482)
T ss_dssp ESCEEECCCEEECGG-GTTGGGTTCCCCTTSCCCCCTTSBCSSTTEEECGGGTCSS----------CCHHHHHHHHHHHH
T ss_pred cCEEEECcCCCcCCC-CCChhhcCceeCCCCCEeeCCCcccCCCCEEEEEcccCCC----------ccHHHHHHHHHHHH
Confidence 999999999999998 6 5777888888899999999999999999999999743 67889999999999
Q ss_pred hhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCC--ceEEEe----------ecCCccEEEEEE--EC
Q psy1545 342 KCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEND--YEILLR----------VTRGEEYIKLVM--KD 407 (454)
Q Consensus 342 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~--~~~~~~----------~~~~~~~~k~~~--~~ 407 (454)
.||++... ...+...|+.+ +++++++++|+++.++...+ +.+... .....+|+|+++ ++
T Consensus 344 ~~i~g~~~-~~~~~~~p~~~------~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 416 (482)
T 1ojt_A 344 ENCAGHKA-YFDARVIPGVA------YTSPEVAWVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAET 416 (482)
T ss_dssp HHHTTCCC-CCCCCCCCEEE------CSSSCEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTT
T ss_pred HHHcCCCc-cCCCCCCCEEE------EcCCCeEEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCC
Confidence 99997421 11112233333 44559999999987765333 222211 123568999999 58
Q ss_pred CeEEEEEEEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 408 GRMQGAVLIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 408 ~~i~G~~~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
++|+|+|++|+. +.++.++.+|++++|++++.+. .++++++.+
T Consensus 417 ~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~-~~~~Pt~~e 461 (482)
T 1ojt_A 417 GRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKT-IHPHPTLGE 461 (482)
T ss_dssp CBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS-CCCSSSSTT
T ss_pred CEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcC-ccCCCCHHH
Confidence 999999999998 4688999999999999999765 444444444
No 26
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.9e-50 Score=405.06 Aligned_cols=379 Identities=18% Similarity=0.232 Sum_probs=285.6
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc---------------c-----c----cccch
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK---------------L-----L----SDITV 57 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~---------------~-----~----~~~~~ 57 (454)
++||+|||||++|+++|..|++. +.+|+|||+++..+.|.+..+.+. . + ...++
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~ 81 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMY--GQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNW 81 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT--TCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCeEEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 58999999999999999999997 899999999865544332211000 0 0 00111
Q ss_pred h----------h----hHHHHHhc-CcEEEcceEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCCCceeeeecc
Q psy1545 58 E----------E----TDANKFEG-LCTVIVDTVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYSPHVITIRDT 122 (454)
Q Consensus 58 ~----------~----~~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~~~~~~~~~~ 122 (454)
. . .....+.+ +++++.++++.+++. .|.+ +++.+.||+||||||++|+.|++++. ..+.+.
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~--~v~~-~g~~~~~d~lviAtGs~p~~p~i~g~-~~~~~~ 157 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAK--TLEV-NGETITADHILIATGGRPSHPDIPGV-EYGIDS 157 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETT--EEEE-TTEEEEEEEEEECCCEEECCCCSTTG-GGSBCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCC--EEEE-CCEEEEeCEEEECCCCCCCCCCCCCc-cceecH
Confidence 0 0 01112233 899999888888764 5666 67789999999999999998887732 123344
Q ss_pred chHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhc
Q psy1545 123 DSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRM 200 (454)
Q Consensus 123 ~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~ 200 (454)
+++..+. ..+++++|||+|++|+|+|..|. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 158 ~~~~~~~---~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~------------- 220 (450)
T 1ges_A 158 DGFFALP---ALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-FDPMISETLVEVMNA------------- 220 (450)
T ss_dssp HHHHHCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH-------------
T ss_pred HHhhhhh---hcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-hhHHHHHHHHHHHHH-------------
Confidence 5554433 24899999999999999999986 9999999999998874 788877777777755
Q ss_pred ccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccc
Q psy1545 201 RYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQ 280 (454)
Q Consensus 201 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~ 280 (454)
.||++++++.+++++.+++ ..+.+.+++|+++++|.|++|+|++|+.+ +
T Consensus 221 ----------------------------~Gv~i~~~~~v~~i~~~~~--~~~~v~~~~g~~i~~D~vv~a~G~~p~~~-~ 269 (450)
T 1ges_A 221 ----------------------------EGPQLHTNAIPKAVVKNTD--GSLTLELEDGRSETVDCLIWAIGREPAND-N 269 (450)
T ss_dssp ----------------------------HSCEEECSCCEEEEEECTT--SCEEEEETTSCEEEESEEEECSCEEESCT-T
T ss_pred ----------------------------CCCEEEeCCEEEEEEEeCC--cEEEEEECCCcEEEcCEEEECCCCCcCCC-C
Confidence 8999999999999987542 23678888998999999999999999987 4
Q ss_pred --cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCC-cceecc
Q psy1545 281 --VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNE-PVIQDF 357 (454)
Q Consensus 281 --~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~~ 357 (454)
++..|++++++|+|.||+++||+.|+|||+|||++. +++++.|..||+.+|.||++..... ..+..+
T Consensus 270 l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~ 339 (450)
T 1ges_A 270 INLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGA----------VELTPVAVAAGRRLSERLFNNKPDEHLDYSNI 339 (450)
T ss_dssp SCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGGTS----------CCCHHHHHHHHHHHHHHHHTTCTTCCCCCSSC
T ss_pred CCchhcCceECCCCCEeECCCCccCCCCEEEEeccCCC----------CccHHHHHHHHHHHHHHHcCCCCcccCCCCCC
Confidence 455678888889999999999999999999999864 3578899999999999999743211 122234
Q ss_pred ceeeeeeeeeecCeEEEEeecccCCcCCC----CceEEE----------eecCCccEEEEEE--ECCeEEEEEEEcCCc-
Q psy1545 358 SFEMFTHMTKFFGYKVILLGLFNGQTLEN----DYEILL----------RVTRGEEYIKLVM--KDGRMQGAVLIGETE- 420 (454)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~vG~~~~~~~~~----~~~~~~----------~~~~~~~~~k~~~--~~~~i~G~~~~g~~~- 420 (454)
|..+|+. .+++++|+++.++... .+++.. ......+|+|+++ ++++|+|+|++|+..
T Consensus 340 p~~~~~~------~~~a~vG~~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~ 413 (450)
T 1ges_A 340 PTVVFSH------PPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMD 413 (450)
T ss_dssp CEEECCS------SCEEEEECCHHHHHHHHCGGGEEEEEEEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHH
T ss_pred CeEEECC------CceEEEeCCHHHHHhcCCCCcEEEEEEECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHH
Confidence 4445544 4899999988765432 233221 0123568999999 489999999999873
Q ss_pred -hHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 421 -IEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 421 -~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
.++.++.+|++++|++|+.+. .++++++.+
T Consensus 414 ~~i~~~~~ai~~~~t~~~l~~~-~~~hPt~~e 444 (450)
T 1ges_A 414 EMLQGFAVALKMGATKKDFDNT-VAIHPTAAE 444 (450)
T ss_dssp HHHHHHHHHHHTTCBHHHHHTS-CCCSSCSGG
T ss_pred HHHHHHHHHHHCCCCHHHHhcC-ccCCCChHH
Confidence 578999999999999999665 556666655
No 27
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.3e-50 Score=411.52 Aligned_cols=390 Identities=19% Similarity=0.262 Sum_probs=276.3
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc-------------------cc---cccchh
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK-------------------LL---SDITVE 58 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~-------------------~~---~~~~~~ 58 (454)
|++||+|||||+||++||..|++. +.+|+|||+++..+.|.+..+.+. .+ ...++.
T Consensus 1 m~~dVvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (500)
T 1onf_A 1 MVYDLIVIGGGSGGMAAARRAARH--NAKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLP 78 (500)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHH
T ss_pred CccCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHH
Confidence 789999999999999999999998 899999999976544433211110 00 011111
Q ss_pred ----------hh----HHHHHhc-CcEEEcceEEEEeCcccEEEecc-------------CcEEEecEEEEecCCCCCCC
Q psy1545 59 ----------ET----DANKFEG-LCTVIVDTVAAIDPRVNCVITEK-------------QNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 59 ----------~~----~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~-------------g~~i~~d~lviAtG~~p~~~ 110 (454)
.. ....+.+ +++++.+++..+++. .+.+.+ +..+.||+||||||++|+.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~--~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p 156 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSEN--RILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFP 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC----------------------------CBSSEEECCCCCBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCC--EEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCC
Confidence 00 1122333 899988877777653 344433 56799999999999999988
Q ss_pred CCCCceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhcc
Q psy1545 111 WYSPHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKT 188 (454)
Q Consensus 111 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~ 188 (454)
+++.. ..+.+.+++..+. .+++++|||+|++|+|+|..|. |.+||++++.+++++. +++++.+.+.+.+.+
T Consensus 157 ~i~G~-~~~~~~~~~~~~~----~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~- 229 (500)
T 1onf_A 157 PVKGI-ENTISSDEFFNIK----ESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-FDESVINVLENDMKK- 229 (500)
T ss_dssp SCTTG-GGCEEHHHHTTCC----CCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHH-
T ss_pred CCCCC-CcccCHHHHhccC----CCCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-cchhhHHHHHHHHHh-
Confidence 87722 1123444443332 2899999999999999999986 9999999999999874 788888888887765
Q ss_pred CCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcE-EecCEE
Q psy1545 189 NTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHT-HACDIV 267 (454)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~-~~~D~v 267 (454)
.||++++++.+++++.+++ ..+.+.+++|++ +++|.|
T Consensus 230 ----------------------------------------~gv~i~~~~~v~~i~~~~~--~~~~v~~~~g~~~~~~D~v 267 (500)
T 1onf_A 230 ----------------------------------------NNINIVTFADVVEIKKVSD--KNLSIHLSDGRIYEHFDHV 267 (500)
T ss_dssp ----------------------------------------TTCEEECSCCEEEEEESST--TCEEEEETTSCEEEEESEE
T ss_pred ----------------------------------------CCCEEEECCEEEEEEEcCC--ceEEEEECCCcEEEECCEE
Confidence 8999999999999987542 236788889987 999999
Q ss_pred EEeeccCcCcccc-cCCCCceecCCCceEeccccccccCceeecCcccccCCc-----------------------ccc-
Q psy1545 268 VSAIGVVPNSNIQ-VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWD-----------------------LAK- 322 (454)
Q Consensus 268 i~a~G~~p~~~~~-~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~-----------------------~~~- 322 (454)
++|+|++|+.+.+ ++..++++ ++|+|.||+++||+.|+|||+|||+..+.. ...
T Consensus 268 i~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 346 (500)
T 1onf_A 268 IYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTED 346 (500)
T ss_dssp EECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCBCSSSSEEECSTTEEEC-----------------------------
T ss_pred EECCCCCcCCCCCCchhcCccc-cCCEEEECCCcccCCCCEEEEeccccccccccccccccccccccccccccccccccc
Confidence 9999999999613 57778888 789999999999999999999999942100 000
Q ss_pred chhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCC----CceEEE------
Q psy1545 323 QWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN----DYEILL------ 392 (454)
Q Consensus 323 ~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~----~~~~~~------ 392 (454)
....+++++.|..||++||+||++.......+..+|..+| ++.+++++|+++.++... .+.+..
T Consensus 347 ~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~------~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~ 420 (500)
T 1onf_A 347 IFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTVIF------SHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNL 420 (500)
T ss_dssp -CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCCEEEC------CSSCEEEEECCHHHHHHHTCGGGEEEEEEEECCG
T ss_pred cCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCCeEEE------cCcceEEEeCCHHHHHhcCCCccEEEEEEECchh
Confidence 0023578999999999999999974221111222344444 445899999998765422 222211
Q ss_pred --------eecCCccEEEEEE--ECCeEEEEEEEcCCc--hHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 393 --------RVTRGEEYIKLVM--KDGRMQGAVLIGETE--IEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 393 --------~~~~~~~~~k~~~--~~~~i~G~~~~g~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
......+|+|+++ ++++|+|+|++|+.. .++.++.+|++++|++|+.+. .++++++.+
T Consensus 421 ~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~-~~~~Pt~~e 490 (500)
T 1onf_A 421 FFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAVALKMNATKKDFDET-IPIHPTAAE 490 (500)
T ss_dssp GGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS-CCCTTCSTT
T ss_pred hhhhccccccCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcc-ccCCCCHHH
Confidence 1123567999999 489999999999973 478999999999999999665 555555554
No 28
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.9e-50 Score=406.84 Aligned_cols=379 Identities=17% Similarity=0.227 Sum_probs=288.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc---------------------c--ccccchh
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK---------------------L--LSDITVE 58 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~---------------------~--~~~~~~~ 58 (454)
++||+|||||++|+++|..|++. |.+|+|||+....+.|.+..+.+. . ....++.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~--G~~V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAAL--GKKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWA 82 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT--TCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCEEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHH
Confidence 47999999999999999999998 999999999655443332211100 0 0011111
Q ss_pred ----------hh----HHHHHhc-CcEEEcceEEEEeCcccEEEe-ccCcEEEecEEEEecCCCCC-CCCCCCceeeeec
Q psy1545 59 ----------ET----DANKFEG-LCTVIVDTVAAIDPRVNCVIT-EKQNRIKYKTLCICTGASPR-KIWYSPHVITIRD 121 (454)
Q Consensus 59 ----------~~----~~~~~~~-~i~~~~~~v~~i~~~~~~v~~-~~g~~i~~d~lviAtG~~p~-~~~~~~~~~~~~~ 121 (454)
.. ....+.. +++++.+++.++++. .+.+ .+++.+.||++|+|||++|. .|+++..- .+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~--~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~-~~~~ 159 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPN--TVKLLASGKTVTAERIVIAVGGHPSPHDALPGHE-LCIT 159 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSS--EEEETTTTEEEEEEEEEECCCEEECCCTTSTTGG-GCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCC--EEEEecCCeEEEeCEEEEecCCCcccCCCCCCcc-cccc
Confidence 01 1122333 899999988888754 5666 46778999999999999999 88877211 2234
Q ss_pred cchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhh
Q psy1545 122 TDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKR 199 (454)
Q Consensus 122 ~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~ 199 (454)
.+++..+. ..+++++|||+|++|+|+|..+. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 160 ~~~~~~~~---~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~-~~~~~~~~l~~~l~~------------ 223 (463)
T 4dna_A 160 SNEAFDLP---ALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR-FDQDMRRGLHAAMEE------------ 223 (463)
T ss_dssp HHHHTTCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH------------
T ss_pred HHHHhhhh---cCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHH------------
Confidence 44444332 24899999999999999999986 9999999999998864 788888888777755
Q ss_pred cccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEE-ecCCcEEecCEEEEeeccCcCcc
Q psy1545 200 MRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVK-LTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 200 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~-~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
.||++++++.|++++.+++ ..+.+. +++|+ +++|.|++|+|++|+..
T Consensus 224 -----------------------------~Gv~i~~~~~v~~i~~~~~--~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 224 -----------------------------KGIRILCEDIIQSVSADAD--GRRVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp -----------------------------TTCEEECSCCEEEEEECTT--SCEEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred -----------------------------CCCEEECCCEEEEEEEcCC--CEEEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 8999999999999987653 235788 88887 99999999999999997
Q ss_pred cc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceec
Q psy1545 279 IQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQD 356 (454)
Q Consensus 279 ~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~ 356 (454)
+ ++..|++++++|+|.||+++||+.|+|||+|||++. +++++.|..||+++|+||++.......+..
T Consensus 272 -~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~ 340 (463)
T 4dna_A 272 -GLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTDR----------VQLTPVAIHEAMCFIETEYKNNPTSPDHDL 340 (463)
T ss_dssp -TSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGGGSS----------CCCHHHHHHHHHHHHHHHHSSCCCCCCCSC
T ss_pred -CCCccccCceECCCCCEeECcCCCCCCCCEEEEEecCCC----------CCChHHHHHHHHHHHHHHcCCCCcccCCCC
Confidence 6 566788888899999999999999999999999874 368899999999999999985433223334
Q ss_pred cceeeeeeeeeecCeEEEEeecccCCcCCCCc--eEEE---e-------ecCCccEEEEEE--ECCeEEEEEEEcCC--c
Q psy1545 357 FSFEMFTHMTKFFGYKVILLGLFNGQTLENDY--EILL---R-------VTRGEEYIKLVM--KDGRMQGAVLIGET--E 420 (454)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~--~~~~---~-------~~~~~~~~k~~~--~~~~i~G~~~~g~~--~ 420 (454)
+|..+|+.+ +++.+|+++.++...+. .+.. . .....+|+|+++ ++++|||+|++|+. +
T Consensus 341 ~p~~~~~~p------~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~ 414 (463)
T 4dna_A 341 IATAVFSQP------EIGTVGITEEEAARKFQEIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGE 414 (463)
T ss_dssp CCEEECSSS------CEEEEECCHHHHHHHSSEEEEEEEEECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHH
T ss_pred CCEEEECCC------CeEEecCCHHHHHHcCCCeEEEEEeccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHH
Confidence 555555544 89999999987654332 2211 1 113568999999 47999999999987 3
Q ss_pred hHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 421 IEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 421 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
.++.++.+|++++|++||.+. .++++++++
T Consensus 415 ~i~~~~~ai~~~~t~~~l~~~-~~~hPt~~e 444 (463)
T 4dna_A 415 MAQLLGISLRAGCTKDDFDRT-MAVHPTAAE 444 (463)
T ss_dssp HHHHHHHHHHTTCBHHHHHTS-CCCTTCSGG
T ss_pred HHHHHHHHHHCCCCHHHHhhc-ccCCCCHHH
Confidence 578999999999999999664 555555555
No 29
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=2.2e-50 Score=408.09 Aligned_cols=382 Identities=18% Similarity=0.193 Sum_probs=285.9
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC-------ccccccccccccc---------------cc------
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG-------IVKAVTKTVPVTK---------------LL------ 52 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~-------~~~~~~~~~~~~~---------------~~------ 52 (454)
+++||+|||||++|++||..|++. |.+|+|||+++ ..+.|.+..+.+. .+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~ 79 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL--GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGIS 79 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH--TCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC--CCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 468999999999999999999998 89999999987 3332222211000 00
Q ss_pred ---cccchh------hh--------HHHHHhc-CcEEEcceEEEEeCcccEEEeccC--cEEEecEEEEecCCCCCCCCC
Q psy1545 53 ---SDITVE------ET--------DANKFEG-LCTVIVDTVAAIDPRVNCVITEKQ--NRIKYKTLCICTGASPRKIWY 112 (454)
Q Consensus 53 ---~~~~~~------~~--------~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lviAtG~~p~~~~~ 112 (454)
...++. .. ....+.+ +++++.+.+..+++....|...+| ..+.||+||||||++|+.|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~ 159 (476)
T 3lad_A 80 TGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPP 159 (476)
T ss_dssp CSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTT
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCC
Confidence 001110 00 1112233 899999999998888777877667 579999999999999887665
Q ss_pred C-CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccC
Q psy1545 113 S-PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTN 189 (454)
Q Consensus 113 ~-~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~ 189 (454)
. .....+.+..++..+. ..+++++|||+|++|+|+|..+. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 160 ~~~~~~~v~~~~~~~~~~---~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~-- 233 (476)
T 3lad_A 160 APVDQDVIVDSTGALDFQ---NVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-VDEQVAKEAQKILTK-- 233 (476)
T ss_dssp SCCCSSSEEEHHHHTSCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHH--
T ss_pred CCCCcccEEechhhhccc---cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-cCHHHHHHHHHHHHh--
Confidence 4 1111223334333322 24899999999999999999986 9999999999999884 788888888777755
Q ss_pred CCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCC---cEEecCE
Q psy1545 190 TAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNG---HTHACDI 266 (454)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g---~~~~~D~ 266 (454)
.||++++++.+++++.+++ .+.+.+.++ +++++|.
T Consensus 234 ---------------------------------------~Gv~v~~~~~v~~i~~~~~---~~~v~~~~~~g~~~~~~D~ 271 (476)
T 3lad_A 234 ---------------------------------------QGLKILLGARVTGTEVKNK---QVTVKFVDAEGEKSQAFDK 271 (476)
T ss_dssp ---------------------------------------TTEEEEETCEEEEEEECSS---CEEEEEESSSEEEEEEESE
T ss_pred ---------------------------------------CCCEEEECCEEEEEEEcCC---EEEEEEEeCCCcEEEECCE
Confidence 8999999999999987653 456777654 6799999
Q ss_pred EEEeeccCcCccc-ccCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhc
Q psy1545 267 VVSAIGVVPNSNI-QVHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMV 345 (454)
Q Consensus 267 vi~a~G~~p~~~~-~~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 345 (454)
|++|+|++|+.+. .++..++.++++|+|.||+++||+.|||||+|||+..+ ++++.|..||++||+||+
T Consensus 272 vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~ 341 (476)
T 3lad_A 272 LIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDVVRGA----------MLAHKASEEGVVVAERIA 341 (476)
T ss_dssp EEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCcccCCCCCccccCccccCCCCEeeCCCcccCCCCEEEEEccCCCc----------ccHHHHHHHHHHHHHHhc
Confidence 9999999999872 25677888888999999999999999999999999643 578899999999999999
Q ss_pred CCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCCceEEEe------------ecCCccEEEEEE--ECCeEE
Q psy1545 346 GAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDYEILLR------------VTRGEEYIKLVM--KDGRMQ 411 (454)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~------------~~~~~~~~k~~~--~~~~i~ 411 (454)
+.... ..+..+|..+|+. ++++.+|+++.++...+++.... .....+|+|+++ ++++|+
T Consensus 342 g~~~~-~~~~~~p~~~~~~------~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~il 414 (476)
T 3lad_A 342 GHKAQ-MNYDLIPAVIYTH------PEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVL 414 (476)
T ss_dssp HCCCC-CCTTCCCEEECSS------SEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEE
T ss_pred CCCcc-cCCCCCCEEEECc------CCEEEeeCCHHHHHhcCCCEEEEEEeccccchheecCCCcEEEEEEEECCCCEEE
Confidence 75321 1222345555544 49999999998765443322211 113568999999 479999
Q ss_pred EEEEEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCC
Q psy1545 412 GAVLIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDID 450 (454)
Q Consensus 412 G~~~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 450 (454)
|+|++|+. +.++.++.+|++++|++||.+.. +++++++
T Consensus 415 G~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~-~~hPt~~ 454 (476)
T 3lad_A 415 GVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMV-FAHPALS 454 (476)
T ss_dssp EEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSC-CCSSCSH
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCc-cCCCChH
Confidence 99999997 35789999999999999997654 3444443
No 30
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=5.5e-50 Score=405.88 Aligned_cols=380 Identities=17% Similarity=0.253 Sum_probs=283.1
Q ss_pred cccEEEECCCHHHHHHHHHHhh-cCCCCeEEEEC---------CCCccccccccccccc-------------------cc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAF-LHPGESIGLVT---------PSGIVKAVTKTVPVTK-------------------LL 52 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-~~~g~~v~lie---------~~~~~~~~~~~~~~~~-------------------~~ 52 (454)
++||+|||||+||++||..|++ . |.+|+||| +....+.|.++.+.+. .+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~--G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~ 84 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLY--GKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGW 84 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH--CCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred ccCEEEECCChhHHHHHHHHHHhc--CCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCc
Confidence 4899999999999999999999 8 89999999 4444333333211110 00
Q ss_pred ----c--ccchh------hh--------HHHHHh-c-CcEEEcceEEEEeCcccEEEec---c-----CcEEEecEEEEe
Q psy1545 53 ----S--DITVE------ET--------DANKFE-G-LCTVIVDTVAAIDPRVNCVITE---K-----QNRIKYKTLCIC 102 (454)
Q Consensus 53 ----~--~~~~~------~~--------~~~~~~-~-~i~~~~~~v~~i~~~~~~v~~~---~-----g~~i~~d~lviA 102 (454)
. ..++. .. ....+. . +++++.++++.+++ +.|.+. + ++.+.||+||||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~--~~v~v~~~~~~~~~~~~~~~~d~lViA 162 (495)
T 2wpf_A 85 EFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESK--NVVVVRETADPKSAVKERLQADHILLA 162 (495)
T ss_dssp ECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEEC
T ss_pred ccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeC--CEEEEeecCCccCCCCeEEEcCEEEEe
Confidence 0 11111 00 111222 2 79999999988876 456664 3 568999999999
Q ss_pred cCCCCCCCCCCCceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHh--c---CCcEEEEEeCCCccccccCCcc
Q psy1545 103 TGASPRKIWYSPHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHEL--S---NVDIVWVVKDKHISATFLDPGA 177 (454)
Q Consensus 103 tG~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l--~---g~~V~~i~~~~~~~~~~~d~~~ 177 (454)
||++|+.|+++.. ..+.+.+++..+. ..+++++|||+|++|+|+|..| . |.+||++++.+++++. +++++
T Consensus 163 TGs~p~~p~i~G~-~~~~~~~~~~~~~---~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d~~~ 237 (495)
T 2wpf_A 163 TGSWPQMPAIPGI-EHCISSNEAFYLP---EPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-FDETI 237 (495)
T ss_dssp CCEEECCCCCTTG-GGCEEHHHHTTCS---SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT-SCHHH
T ss_pred CCCCcCCCCCCCc-cccccHHHHHhhh---hcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc-cCHHH
Confidence 9999998887722 1233444444332 2479999999999999999987 3 8999999999998875 78888
Q ss_pred hhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEec
Q psy1545 178 AEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT 257 (454)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~ 257 (454)
...+.+.+.+ .||++++++.|.+++.+++ ..+.+.++
T Consensus 238 ~~~l~~~l~~-----------------------------------------~GV~i~~~~~v~~i~~~~~--~~~~v~~~ 274 (495)
T 2wpf_A 238 REEVTKQLTA-----------------------------------------NGIEIMTNENPAKVSLNTD--GSKHVTFE 274 (495)
T ss_dssp HHHHHHHHHH-----------------------------------------TTCEEEESCCEEEEEECTT--SCEEEEET
T ss_pred HHHHHHHHHh-----------------------------------------CCCEEEeCCEEEEEEEcCC--ceEEEEEC
Confidence 8888777755 8999999999999987542 24678888
Q ss_pred CCcEEecCEEEEeeccCcCcccc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHH
Q psy1545 258 NGHTHACDIVVSAIGVVPNSNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKH 335 (454)
Q Consensus 258 ~g~~~~~D~vi~a~G~~p~~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~ 335 (454)
+|+++++|.|++|+|++|+.+ + ++..+++++++|+|.||+++||+.|+|||+|||+.. +++++.|..
T Consensus 275 ~G~~i~~D~vv~a~G~~p~~~-~L~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~----------~~l~~~A~~ 343 (495)
T 2wpf_A 275 SGKTLDVDVVMMAIGRIPRTN-DLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDR----------LMLTPVAIN 343 (495)
T ss_dssp TSCEEEESEEEECSCEEECCG-GGTGGGTTCCBCTTSSBCCCTTCBCSSTTEEECGGGGCS----------CCCHHHHHH
T ss_pred CCcEEEcCEEEECCCCccccc-ccchhhcCccCCCCCCEEECCCCccCCCCEEEEeccCCC----------ccCHHHHHH
Confidence 998999999999999999997 4 566788888889999999999999999999999963 368889999
Q ss_pred HHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCC--ceEEE---e-------ecCCccE-EE
Q psy1545 336 MGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEND--YEILL---R-------VTRGEEY-IK 402 (454)
Q Consensus 336 ~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~--~~~~~---~-------~~~~~~~-~k 402 (454)
||++||.||++.......+..+|..+|+ +.+++++|+++.++.... +.+.. . .....+| +|
T Consensus 344 ~g~~aa~~i~g~~~~~~~~~~~p~~~~~------~~~~a~vGl~e~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~k 417 (495)
T 2wpf_A 344 EGAALVDTVFGNKPRKTDHTRVASAVFS------IPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAK 417 (495)
T ss_dssp HHHHHHHHHHSSCCCCCCCSSCEEEECC------SSCEEEEECCHHHHHHHSSEEEEEEEEECCTHHHHHSCTTCCEEEE
T ss_pred HHHHHHHHhcCCCCCcCCCCCCCEEEEC------CCCeEEEeCCHHHHHhcCCCEEEEEEecCchhhhhhcCCCcEEEEE
Confidence 9999999999743221222233444444 558999999987654322 22111 0 1135689 99
Q ss_pred EEEE--CCeEEEEEEEcCCc--hHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 403 LVMK--DGRMQGAVLIGETE--IEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 403 ~~~~--~~~i~G~~~~g~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
++++ +++|+|+|++|+.. .++.++.+|++++|++|+.+. .+++.++.+
T Consensus 418 lv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~-~~~hPt~~e 469 (495)
T 2wpf_A 418 IVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNT-IGVHPTSAE 469 (495)
T ss_dssp EEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHS-CCCSSCSGG
T ss_pred EEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhc-ccCCCChHH
Confidence 9994 89999999999983 478899999999999999765 555555554
No 31
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.9e-50 Score=406.79 Aligned_cols=382 Identities=20% Similarity=0.232 Sum_probs=283.2
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc-ccccccc----------------------cc--cccc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV-TKTVPVT----------------------KL--LSDI 55 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~-~~~~~~~----------------------~~--~~~~ 55 (454)
|++||+|||||+||++||..|++. |.+|+|||+++.+++. .+..+.+ .. ....
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQL--GMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKL 101 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCcc
Confidence 368999999999999999999998 8999999987655442 2221100 00 0001
Q ss_pred chhh--------------hHHHHHhc-CcEEEcceEEEEeCcccEEEeccC--cEEEecEEEEecCCCCCCCCCCC---c
Q psy1545 56 TVEE--------------TDANKFEG-LCTVIVDTVAAIDPRVNCVITEKQ--NRIKYKTLCICTGASPRKIWYSP---H 115 (454)
Q Consensus 56 ~~~~--------------~~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lviAtG~~p~~~~~~~---~ 115 (454)
++.. .....+.. +++++.+.+..+++....|...+| .++.||+||||||++|..++..+ .
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~ipg~~~~~~ 181 (491)
T 3urh_A 102 NLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFD 181 (491)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCBTTBCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCCCCcccccC
Confidence 1110 01112333 899999999999888777777666 57999999999999874332111 1
Q ss_pred eeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCCh
Q psy1545 116 VITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKP 193 (454)
Q Consensus 116 ~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~ 193 (454)
...+.+..+...+. ..+++++|||+|++|+|+|..+. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 182 ~~~~~~~~~~~~~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~------ 251 (491)
T 3urh_A 182 EKTIVSSTGALALE---KVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-MDGEVAKQLQRMLTK------ 251 (491)
T ss_dssp SSSEECHHHHTSCS---SCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-SCHHHHHHHHHHHHH------
T ss_pred CeeEEehhHhhhhh---hcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-CCHHHHHHHHHHHHh------
Confidence 12234444443332 24899999999999999999986 9999999999999885 688888888777755
Q ss_pred hhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecC---C--cEEecCEEE
Q psy1545 194 ETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTN---G--HTHACDIVV 268 (454)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~---g--~~~~~D~vi 268 (454)
.||++++++.+.+++.+++ .+.+.+++ | +++++|.|+
T Consensus 252 -----------------------------------~gV~v~~~~~v~~i~~~~~---~~~v~~~~~~~g~~~~i~~D~Vi 293 (491)
T 3urh_A 252 -----------------------------------QGIDFKLGAKVTGAVKSGD---GAKVTFEPVKGGEATTLDAEVVL 293 (491)
T ss_dssp -----------------------------------TTCEEECSEEEEEEEEETT---EEEEEEEETTSCCCEEEEESEEE
T ss_pred -----------------------------------CCCEEEECCeEEEEEEeCC---EEEEEEEecCCCceEEEEcCEEE
Confidence 8999999999999987653 45566653 5 689999999
Q ss_pred EeeccCcCcccc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcC
Q psy1545 269 SAIGVVPNSNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVG 346 (454)
Q Consensus 269 ~a~G~~p~~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 346 (454)
+|+|++|+.+ + ++..+++++++|+|.||+++||+.|+|||+|||++.+ ++++.|..||+.||+||++
T Consensus 294 ~a~G~~p~~~-~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 294 IATGRKPSTD-GLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGP----------MLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp ECCCCEECCT-TSCHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTT
T ss_pred EeeCCccCCC-ccCchhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCc----------cchhHHHHHHHHHHHHHcC
Confidence 9999999998 5 4566788888999999999999999999999999643 6889999999999999998
Q ss_pred CCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCCce--EEEe----------ecCCccEEEEEE--ECCeEEE
Q psy1545 347 AVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDYE--ILLR----------VTRGEEYIKLVM--KDGRMQG 412 (454)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~--~~~~----------~~~~~~~~k~~~--~~~~i~G 412 (454)
... +..+..+|+.+|+ +++++.+|+++.++...+++ +... .....+|+|+++ ++++|||
T Consensus 363 ~~~-~~~~~~~p~~~~~------~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG 435 (491)
T 3urh_A 363 QAG-HVNYDVIPGVVYT------QPEVASVGKTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLG 435 (491)
T ss_dssp SCC-CCCTTCCCEEECS------SSCEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEE
T ss_pred CCc-ccCCCCCCEEEEc------cCCeEEEeCCHHHHHhCCCCEEEEEEecCcchhhhcCCCCcEEEEEEEECCCCEEEE
Confidence 532 1122234555554 44999999999876543332 2211 113568999999 4899999
Q ss_pred EEEEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 413 AVLIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 413 ~~~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+|++|+. +.++.++.+|++++|++||.+.. ++++++.+
T Consensus 436 ~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~-~~hPt~~e 475 (491)
T 3urh_A 436 GHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTC-HAHPTMSE 475 (491)
T ss_dssp EEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC-CCSSCTTH
T ss_pred EEEECCCHHHHHHHHHHHHHCCCcHHHHhcCc-cCCCChHH
Confidence 9999998 35789999999999999997765 44444443
No 32
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.8e-50 Score=408.73 Aligned_cols=383 Identities=17% Similarity=0.216 Sum_probs=287.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc-------------------cc----cccchh
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK-------------------LL----SDITVE 58 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~-------------------~~----~~~~~~ 58 (454)
++||+|||||++|++||..|++. |.+|+|||++...+.|.++.+.+. .+ ..+++.
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~--G~~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 97 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAEL--GARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWR 97 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 48999999999999999999998 899999999876555443211100 00 001110
Q ss_pred ------h----h----HHHHHhc-CcEEEcceEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCC---CCCCceeeee
Q psy1545 59 ------E----T----DANKFEG-LCTVIVDTVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKI---WYSPHVITIR 120 (454)
Q Consensus 59 ------~----~----~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~---~~~~~~~~~~ 120 (454)
. . ....+.. +++++.+++..+++....+.. +++++.||+||||||++|+.| +++..- ...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~-~g~~~~~d~lviAtG~~p~~p~~~~i~G~~-~~~ 175 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEV-SGKKYTAPHILIATGGMPSTPHESQIPGAS-LGI 175 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEE-TTEEEECSCEEECCCEEECCCCTTTSTTGG-GSB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEE-CCEEEEeeEEEEccCCCCCCCCcCCCCCCc-eeE
Confidence 0 0 1112233 899999999999888777774 677899999999999999988 776211 223
Q ss_pred ccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhh
Q psy1545 121 DTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFK 198 (454)
Q Consensus 121 ~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~ 198 (454)
+.+++..+.+ .+++++|||+|++|+|+|..+. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 176 ~~~~~~~~~~---~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~~~~~l~~----------- 240 (478)
T 3dk9_A 176 TSDGFFQLEE---LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS-FDSMISTNCTEELEN----------- 240 (478)
T ss_dssp CHHHHTTCCS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHH-----------
T ss_pred chHHhhchhh---cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc-cCHHHHHHHHHHHHH-----------
Confidence 3444433322 3799999999999999999986 9999999999998864 788888888777755
Q ss_pred hcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecC-------CcEEecCEEEEee
Q psy1545 199 RMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTN-------GHTHACDIVVSAI 271 (454)
Q Consensus 199 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~-------g~~~~~D~vi~a~ 271 (454)
.||++++++.+++++..++ +..+.+.+++ |+++++|.|++|+
T Consensus 241 ------------------------------~gv~i~~~~~v~~i~~~~~-~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~ 289 (478)
T 3dk9_A 241 ------------------------------AGVEVLKFSQVKEVKKTLS-GLEVSMVTAVPGRLPVMTMIPDVDCLLWAI 289 (478)
T ss_dssp ------------------------------TTCEEETTEEEEEEEECSS-SEEEEEEECCTTSCCEEEEEEEESEEEECS
T ss_pred ------------------------------CCCEEEeCCEEEEEEEcCC-CcEEEEEEccCCCCcccceEEEcCEEEEee
Confidence 8999999999999987643 2135666765 2679999999999
Q ss_pred ccCcCcccc-cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCC-
Q psy1545 272 GVVPNSNIQ-VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVK- 349 (454)
Q Consensus 272 G~~p~~~~~-~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~- 349 (454)
|++|+.+.+ ++..|++++++|+|.||+++||+.|||||+|||++. +++++.|..||++||+||++...
T Consensus 290 G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~ 359 (478)
T 3dk9_A 290 GRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGK----------ALLTPVAIAAGRKLAHRLFEYKED 359 (478)
T ss_dssp CEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSSTTEEECGGGGCS----------SCCHHHHHHHHHHHHHHHHSCCTT
T ss_pred ccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCCCEEEEEecCCC----------CccHhHHHHHHHHHHHHHcCCCCc
Confidence 999998712 566788888899999999999999999999999954 36788999999999999998621
Q ss_pred CCcceeccceeeeeeeeeecCeEEEEeecccCCcCCC----CceEE---Ee-------ecCCccEEEEEE--ECCeEEEE
Q psy1545 350 NEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN----DYEIL---LR-------VTRGEEYIKLVM--KDGRMQGA 413 (454)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~----~~~~~---~~-------~~~~~~~~k~~~--~~~~i~G~ 413 (454)
....+..+|+.+|+.+ +++.+|+++.++... .+.+. .. .....+|+|+++ ++++|||+
T Consensus 360 ~~~~~~~~p~~~~~~p------~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~ 433 (478)
T 3dk9_A 360 SKLDYNNIPTVVFSHP------PIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGI 433 (478)
T ss_dssp CCCCCTTCCEEECCSS------CEEEEECCHHHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEE
T ss_pred ccCCCCCCCeEEECCC------ceEEeeCCHHHHHhhCCCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEE
Confidence 1222333555555544 899999999876532 12211 11 123568999999 48999999
Q ss_pred EEEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 414 VLIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 414 ~~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
|++|+. +.++.++.+|++++|++||.+ ..++++++++
T Consensus 434 ~~~g~~a~e~i~~~~~ai~~~~t~~~l~~-~~~~hPt~~e 472 (478)
T 3dk9_A 434 HMQGLGCDEMLQGFAVAVKMGATKADFDN-TVAIHPTSSE 472 (478)
T ss_dssp EEESTTHHHHHHHHHHHHHTTCBHHHHHT-SCCCSSSSGG
T ss_pred EEECCCHHHHHHHHHHHHHCCCCHHHHhh-cccCCCChHH
Confidence 999987 357899999999999999966 4445555555
No 33
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=8.2e-50 Score=401.98 Aligned_cols=377 Identities=20% Similarity=0.271 Sum_probs=281.6
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccccc-------------------c---cccchhh
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKL-------------------L---SDITVEE 59 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~-------------------~---~~~~~~~ 59 (454)
++||+|||||+||++||..|++. +.+|+|||+++..+.|.++.+.+.. + ...++..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~--g~~V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 83 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL--GLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKK 83 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHH
Confidence 48999999999999999999998 8999999999854433332211100 0 0011110
Q ss_pred ------h--------HHHHHhc-CcEEEcceEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCC-CCCceeeeeccc
Q psy1545 60 ------T--------DANKFEG-LCTVIVDTVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIW-YSPHVITIRDTD 123 (454)
Q Consensus 60 ------~--------~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~-~~~~~~~~~~~~ 123 (454)
. ....+.+ +++++.+++..+++ +.|.+. |+++.||+||||||++|+.|+ ++... .+.+.+
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~~-~v~~~~ 159 (464)
T 2eq6_A 84 LGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGP--KEVEVG-GERYGAKSLILATGSEPLELKGFPFGE-DVWDST 159 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEET-TEEEEEEEEEECCCEEECCBTTBCCSS-SEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccC--CEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCCC-cEEcHH
Confidence 0 1122334 89999888888775 456665 678999999999999999886 55211 234555
Q ss_pred hHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcc
Q psy1545 124 SVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMR 201 (454)
Q Consensus 124 ~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~ 201 (454)
++..+.+. .+++++|||+|++|+|+|..|. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 160 ~~~~l~~~--~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~-------------- 222 (464)
T 2eq6_A 160 RALKVEEG--LPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-GDPETAALLRRALEK-------------- 222 (464)
T ss_dssp HHTCGGGC--CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH--------------
T ss_pred HHHhhhhh--cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHh--------------
Confidence 55554331 3799999999999999999986 9999999999998874 688887777777755
Q ss_pred cccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEec-C--Cc--EEecCEEEEeeccCcC
Q psy1545 202 YNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT-N--GH--THACDIVVSAIGVVPN 276 (454)
Q Consensus 202 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~-~--g~--~~~~D~vi~a~G~~p~ 276 (454)
.||++++++.+++++.+++ .+.+.++ + |+ ++++|.|++|+|++|+
T Consensus 223 ---------------------------~gV~i~~~~~v~~i~~~~~---~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 223 ---------------------------EGIRVRTKTKAVGYEKKKD---GLHVRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp ---------------------------TTCEEECSEEEEEEEEETT---EEEEEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred ---------------------------cCCEEEcCCEEEEEEEeCC---EEEEEEeecCCCceeEEEcCEEEECCCcccC
Confidence 8999999999999987542 3566765 6 76 8999999999999999
Q ss_pred cccc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcce
Q psy1545 277 SNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVI 354 (454)
Q Consensus 277 ~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~ 354 (454)
.+ + ++..++.++++|+|.||+++||+.|+|||+|||+..+ ++++.|..||+.||+||++... ...+
T Consensus 273 ~~-~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~-~~~~ 340 (464)
T 2eq6_A 273 TE-GLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPP----------LLAHKAMREGLIAAENAAGKDS-AFDY 340 (464)
T ss_dssp CT-TSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGTCSS----------CCHHHHHHHHHHHHHHHTTCCC-CCCC
T ss_pred CC-CCChhhcCceecCCCCEEECCCcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCCc-ccCC
Confidence 97 5 3556788878899999999999999999999998743 5788999999999999997421 1111
Q ss_pred eccceeeeeeeeeecCeEEEEeecccCCcCCCCceEEEe------------ecCCccEEEEEEE--CCeEEEEEEEcCCc
Q psy1545 355 QDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDYEILLR------------VTRGEEYIKLVMK--DGRMQGAVLIGETE 420 (454)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~------------~~~~~~~~k~~~~--~~~i~G~~~~g~~~ 420 (454)
. .|+. .+++.+++.+|+++.++...+++.... .....+|+|++++ +++|+|+|++|+..
T Consensus 341 ~-~p~~------~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a 413 (464)
T 2eq6_A 341 Q-VPSV------VYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQA 413 (464)
T ss_dssp C-CCEE------ECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTH
T ss_pred C-CCeE------EECCCCEEEEeCCHHHHHhcCCCEEEEEEEcCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCH
Confidence 1 3333 344569999999987654333322211 1235689999994 79999999999983
Q ss_pred --hHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 421 --IEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 421 --~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
.++.++.+|++++|++++.+. +++++++.+
T Consensus 414 ~e~i~~~~~ai~~~~~~~~l~~~-~~~~Pt~~e 445 (464)
T 2eq6_A 414 GELIAEAALALEMGATLTDLALT-VHPHPTLSE 445 (464)
T ss_dssp HHHHHHHHHHHHTTCBHHHHHHS-CCCSSCTTH
T ss_pred HHHHHHHHHHHHCCCCHHHHhcC-cCCCCChHH
Confidence 579999999999999999764 334444443
No 34
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=2e-49 Score=399.91 Aligned_cols=376 Identities=18% Similarity=0.214 Sum_probs=282.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccc---------------------cc---cccccccch
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTV---------------------PV---TKLLSDITV 57 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~---------------------~~---~~~~~~~~~ 57 (454)
++||+|||||++|+++|..|++. +.+|+|||++...+.+.+.. .+ .......++
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQ--GAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 58999999999999999999998 89999999986543322211 00 000001111
Q ss_pred hh---------------hHHHHHhc--CcEEEcceEEEEeCcccEEEeccC--cEEEecEEEEecCCCCCCCCCC-Ccee
Q psy1545 58 EE---------------TDANKFEG--LCTVIVDTVAAIDPRVNCVITEKQ--NRIKYKTLCICTGASPRKIWYS-PHVI 117 (454)
Q Consensus 58 ~~---------------~~~~~~~~--~i~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lviAtG~~p~~~~~~-~~~~ 117 (454)
.. .....+.+ +++++.+++.++++....|.+.+| +.+.||+||||||++|+.|+++ ....
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~~~ 161 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLKES 161 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTTTS
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCCcC
Confidence 10 01122333 789988899999988777777777 6899999999999999998887 1112
Q ss_pred eeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhh
Q psy1545 118 TIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPET 195 (454)
Q Consensus 118 ~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~ 195 (454)
.+.+.+++..+. ..+++++|||+|++|+|+|..+. |.+|+++++.+++++ +++++.+.+.+.+.+
T Consensus 162 ~~~~~~~~~~~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~-------- 228 (467)
T 1zk7_A 162 PYWTSTEALASD---TIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAIGEAVTAAFRA-------- 228 (467)
T ss_dssp CCBCHHHHHHCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHHHHHHHHHHHH--------
T ss_pred ceecHHHHhccc---ccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHHHHHHHHHHHh--------
Confidence 234555555443 24899999999999999999986 999999999999887 688887777777755
Q ss_pred hhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 196 IFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 196 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
.||++++++.|++++.+++ .+.+.++ +.++++|.||+|+|++|
T Consensus 229 ---------------------------------~Gv~i~~~~~v~~i~~~~~---~~~v~~~-~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 229 ---------------------------------EGIEVLEHTQASQVAHMDG---EFVLTTT-HGELRADKLLVATGRTP 271 (467)
T ss_dssp ---------------------------------TTCEEETTCCEEEEEEETT---EEEEEET-TEEEEESEEEECSCEEE
T ss_pred ---------------------------------CCCEEEcCCEEEEEEEeCC---EEEEEEC-CcEEEcCEEEECCCCCc
Confidence 8999999999999987542 3456665 45899999999999999
Q ss_pred Ccccc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcc
Q psy1545 276 NSNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPV 353 (454)
Q Consensus 276 ~~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~ 353 (454)
+.+ + ++..+++++++|+|.||+++||+.|+|||+|||+..+ .+++.|..||+.+|.||++.. ....
T Consensus 272 ~~~-~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~-~~~~ 339 (467)
T 1zk7_A 272 NTR-SLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTDQP----------QFVYVAAAAGTRAAINMTGGD-AALD 339 (467)
T ss_dssp SCT-TSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECSTTBSSC----------CCHHHHHHHHHHHHHHHTTCC-CCCC
T ss_pred CCC-cCCchhcCCcCCCCCCEEECCCcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHHcCCC-cccC
Confidence 987 4 4566788888899999999999999999999999753 568899999999999999742 1111
Q ss_pred eeccceeeeeeeeeecCeEEEEeecccCCcCCCCceEEEe------------ecCCccEEEEEEE--CCeEEEEEEEcCC
Q psy1545 354 IQDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDYEILLR------------VTRGEEYIKLVMK--DGRMQGAVLIGET 419 (454)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~------------~~~~~~~~k~~~~--~~~i~G~~~~g~~ 419 (454)
+..+|+.. +++.+++++|+++.++...+++.... .....+|+|++++ +++|+|+|++|+.
T Consensus 340 ~~~~p~~~------~~~~~~a~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~ 413 (467)
T 1zk7_A 340 LTAMPAVV------FTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPE 413 (467)
T ss_dssp CTTCEEEE------CSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETT
T ss_pred CCCCCEEE------ecCCceEEEecCHHHHHhcCCCeEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCC
Confidence 22233333 34559999999987654333322211 1235689999995 8999999999998
Q ss_pred --chHHHHHHHHhcCCCcchhhhhc-cCCCC
Q psy1545 420 --EIEEMCENLILNQLDLTDIADDL-LNPNI 447 (454)
Q Consensus 420 --~~~~~~~~~i~~~~~~~~~~~~~-~~~~~ 447 (454)
+.++.++.+|++++|++++.+.. .+|++
T Consensus 414 a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~ 444 (467)
T 1zk7_A 414 AGELIQTAALAIRNRMTVQELADQLFPYLTM 444 (467)
T ss_dssp HHHHHHHHHHHHHTTCBHHHHHTSCCCTTST
T ss_pred HHHHHHHHHHHHHCCCCHHHHhcCccCCCCH
Confidence 45788999999999999996544 34443
No 35
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.1e-49 Score=403.47 Aligned_cols=383 Identities=15% Similarity=0.197 Sum_probs=283.5
Q ss_pred cccEEEECCCHHHHHHHHHHhh-cCCCCeEEEEC---------CCCccccccccccccc-------------------cc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAF-LHPGESIGLVT---------PSGIVKAVTKTVPVTK-------------------LL 52 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-~~~g~~v~lie---------~~~~~~~~~~~~~~~~-------------------~~ 52 (454)
++||+|||||++|++||..|++ . |.+|+||| +....+.|.++.+.+. .+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~--G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~ 80 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH--KKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGW 80 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH--CCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTE
T ss_pred cccEEEECCCHHHHHHHHHHHHHc--CCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCc
Confidence 5899999999999999999999 8 89999999 5544443333211110 00
Q ss_pred ----c--ccchhh--------------hHHHHHhc--CcEEEcceEEEEeCcccEEEe---ccC---cEEEecEEEEecC
Q psy1545 53 ----S--DITVEE--------------TDANKFEG--LCTVIVDTVAAIDPRVNCVIT---EKQ---NRIKYKTLCICTG 104 (454)
Q Consensus 53 ----~--~~~~~~--------------~~~~~~~~--~i~~~~~~v~~i~~~~~~v~~---~~g---~~i~~d~lviAtG 104 (454)
. ..++.. .....+.+ +++++.++++++++....+.. .+| ..+.||+||||||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtG 160 (490)
T 1fec_A 81 ELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATG 160 (490)
T ss_dssp ECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCC
T ss_pred ccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCC
Confidence 0 111110 11122333 799999999999875433332 256 6899999999999
Q ss_pred CCCCCCCCCCceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHh--c---CCcEEEEEeCCCccccccCCcchh
Q psy1545 105 ASPRKIWYSPHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHEL--S---NVDIVWVVKDKHISATFLDPGAAE 179 (454)
Q Consensus 105 ~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l--~---g~~V~~i~~~~~~~~~~~d~~~~~ 179 (454)
++|+.|+++.. ..+.+.+++..+. ..+++++|||+|++|+|+|..+ . |.+|+++++.+++++. +++++..
T Consensus 161 s~p~~p~i~g~-~~~~~~~~~~~~~---~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d~~~~~ 235 (490)
T 1fec_A 161 SWPQHLGIEGD-DLCITSNEAFYLD---EAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG-FDSELRK 235 (490)
T ss_dssp EEECCCCSBTG-GGCBCHHHHTTCS---SCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT-SCHHHHH
T ss_pred CCCCCCCCCCc-cceecHHHHhhhh---hcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc-cCHHHHH
Confidence 99998887622 1233444444332 2489999999999999999887 3 8999999999998874 7888888
Q ss_pred hhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCC
Q psy1545 180 FFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNG 259 (454)
Q Consensus 180 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g 259 (454)
.+.+.+.+ .||++++++.|++++.+++ ..+.+.+++|
T Consensus 236 ~l~~~l~~-----------------------------------------~GV~i~~~~~v~~i~~~~~--~~~~v~~~~G 272 (490)
T 1fec_A 236 QLTEQLRA-----------------------------------------NGINVRTHENPAKVTKNAD--GTRHVVFESG 272 (490)
T ss_dssp HHHHHHHH-----------------------------------------TTEEEEETCCEEEEEECTT--SCEEEEETTS
T ss_pred HHHHHHHh-----------------------------------------CCCEEEeCCEEEEEEEcCC--CEEEEEECCC
Confidence 88777755 8999999999999987642 2467888899
Q ss_pred cEEecCEEEEeeccCcCcccc-cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHH
Q psy1545 260 HTHACDIVVSAIGVVPNSNIQ-VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGT 338 (454)
Q Consensus 260 ~~~~~D~vi~a~G~~p~~~~~-~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~ 338 (454)
+++++|.||+|+|++|+.+.+ ++..|++++++|+|.||+++||+.|+|||+|||+.. +++++.|..||+
T Consensus 273 ~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~----------~~l~~~A~~~g~ 342 (490)
T 1fec_A 273 AEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDR----------VMLTPVAINEGA 342 (490)
T ss_dssp CEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGGGCS----------CCCHHHHHHHHH
T ss_pred cEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCccCCCCEEEEeccCCC----------ccCHHHHHHHHH
Confidence 899999999999999998712 566788888889999999999999999999999963 368899999999
Q ss_pred HHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCC--ceEEE---e-------ecCCccEE-EEEE
Q psy1545 339 YAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEND--YEILL---R-------VTRGEEYI-KLVM 405 (454)
Q Consensus 339 ~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~--~~~~~---~-------~~~~~~~~-k~~~ 405 (454)
+||.||++.......+..+|..+| ++.+++++|+++.++.... +.+.. . .....+|+ |+++
T Consensus 343 ~aa~~i~g~~~~~~~~~~~p~~~~------~~~~~a~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~ 416 (490)
T 1fec_A 343 AFVDTVFANKPRATDHTKVACAVF------SIPPMGVCGYVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVT 416 (490)
T ss_dssp HHHHHHHSSCCCCCCCSSCCEEEC------CSSCEEEEECCHHHHHHHCSEEEEEEEEECCHHHHHHSCTTCCEEEEEEE
T ss_pred HHHHHhcCCCCCcCCCCCccEEEE------CCCCeEEEeCCHHHHHhcCCCEEEEEeecChhhhhhhcCCCeEEEEEEEE
Confidence 999999974321112222344444 4559999999987654322 22111 0 11356899 9999
Q ss_pred E--CCeEEEEEEEcCCc--hHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 406 K--DGRMQGAVLIGETE--IEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 406 ~--~~~i~G~~~~g~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+ +++|+|+|++|+.. .++.++.+|++++|++|+.+. .++++++.+
T Consensus 417 ~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~-~~~hPt~~e 465 (490)
T 1fec_A 417 NHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNT-IGVHPTSAE 465 (490)
T ss_dssp ETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS-CCCSSCSGG
T ss_pred ECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcc-ccCCCCHHH
Confidence 4 89999999999983 478899999999999999765 555555554
No 36
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1.2e-49 Score=403.41 Aligned_cols=384 Identities=17% Similarity=0.214 Sum_probs=283.1
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCC--------C-cccccccccccc---------------------c
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPS--------G-IVKAVTKTVPVT---------------------K 50 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~--------~-~~~~~~~~~~~~---------------------~ 50 (454)
|++||+|||||+||++||..|++. |.+|+|||+. . ..+.|.++.+.+ .
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~--G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 82 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL--GKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGW 82 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCc
Confidence 468999999999999999999998 8999999972 2 223232221110 0
Q ss_pred cc---cccchh------hh--------HHHHHhc-CcEEEcceEEEEeCcccEEEeccC--cEEEecEEEEecCCCCCCC
Q psy1545 51 LL---SDITVE------ET--------DANKFEG-LCTVIVDTVAAIDPRVNCVITEKQ--NRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 51 ~~---~~~~~~------~~--------~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lviAtG~~p~~~ 110 (454)
.. ...++. .. ....+.. +++++.+++.++++....|...+| .++.||+||||||++|+.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p 162 (488)
T 3dgz_A 83 EVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYP 162 (488)
T ss_dssp CCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCC
Confidence 00 011111 00 1112233 899999999999988877777666 4799999999999999998
Q ss_pred C-CCCceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhc
Q psy1545 111 W-YSPHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINK 187 (454)
Q Consensus 111 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~ 187 (454)
+ ++..-....+.+++..+. ..+++++|||+|++|+|+|..+. |.+|+++++.. +++. +|+++.+.+.+.+.+
T Consensus 163 ~~i~G~~~~~~~~~~~~~~~---~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~l~~-~d~~~~~~l~~~l~~ 237 (488)
T 3dgz_A 163 TQVKGALEYGITSDDIFWLK---ESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI-PLRG-FDQQMSSLVTEHMES 237 (488)
T ss_dssp SSCBTHHHHCBCHHHHTTCS---SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SSTT-SCHHHHHHHHHHHHH
T ss_pred CCCCCcccccCcHHHHHhhh---hcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-cccc-CCHHHHHHHHHHHHH
Confidence 8 772111122444444332 24889999999999999999987 99999999864 4543 688888888777755
Q ss_pred cCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecC---Cc--EE
Q psy1545 188 TNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTN---GH--TH 262 (454)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~---g~--~~ 262 (454)
.||++++++.+.+++..++ ..+.+.+.+ |+ ++
T Consensus 238 -----------------------------------------~gv~~~~~~~v~~i~~~~~--~~~~v~~~~~~~g~~~~~ 274 (488)
T 3dgz_A 238 -----------------------------------------HGTQFLKGCVPSHIKKLPT--NQLQVTWEDHASGKEDTG 274 (488)
T ss_dssp -----------------------------------------TTCEEEETEEEEEEEECTT--SCEEEEEEETTTTEEEEE
T ss_pred -----------------------------------------CCCEEEeCCEEEEEEEcCC--CcEEEEEEeCCCCeeEEE
Confidence 8999999999999986432 235565554 54 57
Q ss_pred ecCEEEEeeccCcCcccc--cCCCCceec-CCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHH
Q psy1545 263 ACDIVVSAIGVVPNSNIQ--VHGTPFELA-PDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTY 339 (454)
Q Consensus 263 ~~D~vi~a~G~~p~~~~~--~~~~~l~~~-~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~ 339 (454)
++|.|++|+|++|+.+ + ++..+++++ ++|+|.||+++||+.|||||+|||+... +++++.|..||++
T Consensus 275 ~~D~vi~a~G~~p~~~-~l~l~~~g~~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~---------~~~~~~A~~~g~~ 344 (488)
T 3dgz_A 275 TFDTVLWAIGRVPETR-TLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVAEGR---------PELTPTAIKAGKL 344 (488)
T ss_dssp EESEEEECSCEEESCG-GGTGGGGTCCBCSSSCCBCCCTTSBCSSTTEEECGGGBTTC---------CCCHHHHHHHHHH
T ss_pred ECCEEEEcccCCcccC-cCCccccCcEecCCCCeEeECCCCccCCCCEEEeEEecCCC---------CcchhHHHHHHHH
Confidence 9999999999999998 6 566788888 7899999999999999999999998532 3678899999999
Q ss_pred HHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCC----CceEEE---ee--------cCCccEEEEE
Q psy1545 340 AAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN----DYEILL---RV--------TRGEEYIKLV 404 (454)
Q Consensus 340 aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~----~~~~~~---~~--------~~~~~~~k~~ 404 (454)
||+||++.......+..+|+.+|+.+ +++.+|+++.++... .+.+.. .. ....+|+|++
T Consensus 345 aa~~i~g~~~~~~~~~~~p~~~~~~p------~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i 418 (488)
T 3dgz_A 345 LAQRLFGKSSTLMDYSNVPTTVFTPL------EYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMV 418 (488)
T ss_dssp HHHHHHSCCCCCCCCTTCCEEECSSS------EEEEEECCHHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEE
T ss_pred HHHHHcCCCCccCCCCCCCEEEECCC------CeEEEeCCHHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEE
Confidence 99999986433323334566666655 899999999776432 222221 00 1156899999
Q ss_pred EE---CCeEEEEEEEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 405 MK---DGRMQGAVLIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 405 ~~---~~~i~G~~~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
++ +++|||+|++|+. +.++.++.+|++++|++||.+. .++++++++
T Consensus 419 ~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~-~~~hPt~~e 469 (488)
T 3dgz_A 419 CMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQT-VGIHPTCSE 469 (488)
T ss_dssp EESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTS-CCCSSCSTH
T ss_pred EecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcc-ccCCCChHH
Confidence 95 6999999999997 4678999999999999999765 445555544
No 37
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.3e-49 Score=401.99 Aligned_cols=381 Identities=21% Similarity=0.231 Sum_probs=283.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc-cccccccc--------------------cc----cccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV-TKTVPVTK--------------------LL----SDIT 56 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~-~~~~~~~~--------------------~~----~~~~ 56 (454)
++||+|||||+||+++|..|++. +.+|+|||+++.+++. .+....+. .+ ...+
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~--g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL--GFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEID 83 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 47999999999999999999998 8999999999654432 22111000 00 0011
Q ss_pred hhh--------------hHHHHHhc-CcEEEcceEEEEeCcccEEEeccC--cEEEecEEEEecCCCCCCCCCCC-ceee
Q psy1545 57 VEE--------------TDANKFEG-LCTVIVDTVAAIDPRVNCVITEKQ--NRIKYKTLCICTGASPRKIWYSP-HVIT 118 (454)
Q Consensus 57 ~~~--------------~~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lviAtG~~p~~~~~~~-~~~~ 118 (454)
+.. .....+.+ +++++.+++..++++...|.+.+| ..++||+||+|||++|+.|++++ ....
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~~~~ 163 (470)
T 1dxl_A 84 LAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKK 163 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCccc
Confidence 100 01122333 899998877778877666666566 68999999999999998887761 1112
Q ss_pred eeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhh
Q psy1545 119 IRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETI 196 (454)
Q Consensus 119 ~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~ 196 (454)
+.+..++..+. ..+++++|||+|++|+|+|..|. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 164 v~~~~~~~~~~---~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~--------- 230 (470)
T 1dxl_A 164 IVSSTGALALS---EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-MDAEIRKQFQRSLEK--------- 230 (470)
T ss_dssp EECHHHHTTCS---SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH---------
T ss_pred EEeHHHhhhhh---hcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-ccHHHHHHHHHHHHH---------
Confidence 34444444432 24899999999999999999986 9999999999998884 788888877777755
Q ss_pred hhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEec---CC--cEEecCEEEEee
Q psy1545 197 FKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT---NG--HTHACDIVVSAI 271 (454)
Q Consensus 197 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~---~g--~~~~~D~vi~a~ 271 (454)
.||++++++.+.+++.+++ .+.+.++ +| +++++|.|++|+
T Consensus 231 --------------------------------~gv~i~~~~~v~~i~~~~~---~~~v~~~~~~~g~~~~~~~D~vv~a~ 275 (470)
T 1dxl_A 231 --------------------------------QGMKFKLKTKVVGVDTSGD---GVKLTVEPSAGGEQTIIEADVVLVSA 275 (470)
T ss_dssp --------------------------------SSCCEECSEEEEEEECSSS---SEEEEEEESSSCCCEEEEESEEECCC
T ss_pred --------------------------------cCCEEEeCCEEEEEEEcCC---eEEEEEEecCCCcceEEECCEEEECC
Confidence 8999999999999987653 3556654 45 689999999999
Q ss_pred ccCcCcccc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCC
Q psy1545 272 GVVPNSNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVK 349 (454)
Q Consensus 272 G~~p~~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 349 (454)
|++|+.+ + ++..+++++++|+|.||+++||+.|+|||+|||+..+ ++++.|..||++||.||++...
T Consensus 276 G~~p~~~-~l~~~~~gl~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~ 344 (470)
T 1dxl_A 276 GRTPFTS-GLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGP----------MLAHKAEEDGVACVEYLAGKVG 344 (470)
T ss_dssp CEEECCT-TSCCTTTTCCBCSSSCBCCCTTCBCSSTTEEECSTTSSSC----------CCHHHHHHHHHHHHHHHTTSCC
T ss_pred CCCcCCC-CCCchhcCCccCCCCCEeECcCCccCCCCEEEEeccCCCC----------ccHHHHHHHHHHHHHHHcCCCc
Confidence 9999998 6 6777888888899999999999999999999998743 5788999999999999997421
Q ss_pred CCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCC--ceEEEe----------ecCCccEEEEEEE--CCeEEEEEE
Q psy1545 350 NEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEND--YEILLR----------VTRGEEYIKLVMK--DGRMQGAVL 415 (454)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~--~~~~~~----------~~~~~~~~k~~~~--~~~i~G~~~ 415 (454)
...+..+|+ ..+++.+++++|+++.++...+ +.+... .....+|+|++++ +++|+|+|+
T Consensus 345 -~~~~~~~p~------~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~ 417 (470)
T 1dxl_A 345 -HVDYDKVPG------VVYTNPEVASVGKTEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHI 417 (470)
T ss_dssp -CCCTTSCCE------EECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEE
T ss_pred -CCCCCCCCE------EEECCCceEEEcCCHHHHHhcCCcEEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEE
Confidence 111112233 3445669999999987664333 322211 1235689999994 899999999
Q ss_pred EcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 416 IGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 416 ~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+|+. +.++.+..+|++++|++++.+. .++++++.+
T Consensus 418 ~g~~a~~~i~~~~~ai~~~~~~~~l~~~-~~~~Pt~~e 454 (470)
T 1dxl_A 418 MAPNAGELIHEAAIALQYDASSEDIARV-CHAHPTMSE 454 (470)
T ss_dssp EETTHHHHHHHHHHHHHTTCBHHHHHTS-CCCSSCTTH
T ss_pred ECCCHHHHHHHHHHHHHCCCCHHHHhhc-ccCCCChHH
Confidence 9998 4679999999999999999765 445555443
No 38
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.8e-49 Score=404.37 Aligned_cols=385 Identities=16% Similarity=0.190 Sum_probs=281.6
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC---------cccccccccccc---------------------cc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG---------IVKAVTKTVPVT---------------------KL 51 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~---------~~~~~~~~~~~~---------------------~~ 51 (454)
++||+|||||+||++||..|++. |.+|+|||+.+ ..+.|.+..+.+ ..
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~--G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQY--GKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 48999999999999999999998 89999999853 222232221110 00
Q ss_pred c---cccchh------hhH--------HHHHhc-CcEEEcceEEEEeCcccEEEeccCc--EEEecEEEEecCCCCCCCC
Q psy1545 52 L---SDITVE------ETD--------ANKFEG-LCTVIVDTVAAIDPRVNCVITEKQN--RIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 52 ~---~~~~~~------~~~--------~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g~--~i~~d~lviAtG~~p~~~~ 111 (454)
. ...++. ... ...+.. +++++.+.+.++++....|...+|+ ++.||+||||||++|+.|+
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~p~ 189 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLG 189 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECCCC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCCCC
Confidence 0 011111 111 112233 9999999999999988788776664 7999999999999999998
Q ss_pred CCCceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccC
Q psy1545 112 YSPHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTN 189 (454)
Q Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~ 189 (454)
++.....+.+.+++..+. ..+++++|||+|++|+|+|..+. |.+||+++++ .+++. +|+++.+.+.+.+.+
T Consensus 190 i~G~~~~~~t~~~~~~l~---~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~-~d~~~~~~~~~~l~~-- 262 (519)
T 3qfa_A 190 IPGDKEYCISSDDLFSLP---YCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRG-FDQDMANKIGEHMEE-- 262 (519)
T ss_dssp CTTHHHHCBCHHHHTTCS---SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHHHHHHHHHHHHH--
T ss_pred CCCccCceEcHHHHhhhh---hcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccccc-CCHHHHHHHHHHHHH--
Confidence 873111233444444332 24789999999999999999987 9999999985 56654 688888888777755
Q ss_pred CCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCC-CccceEE--EecCC---cEEe
Q psy1545 190 TAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSED-DTCNAYV--KLTNG---HTHA 263 (454)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~~~v--~~~~g---~~~~ 263 (454)
.||++++++.+.++...++ ....+.+ ...+| .+++
T Consensus 263 ---------------------------------------~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~ 303 (519)
T 3qfa_A 263 ---------------------------------------HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGE 303 (519)
T ss_dssp ---------------------------------------TTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEE
T ss_pred ---------------------------------------CCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEE
Confidence 8999999988877765321 0112333 34455 2578
Q ss_pred cCEEEEeeccCcCcccc--cCCCCceec-CCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHH
Q psy1545 264 CDIVVSAIGVVPNSNIQ--VHGTPFELA-PDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYA 340 (454)
Q Consensus 264 ~D~vi~a~G~~p~~~~~--~~~~~l~~~-~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~a 340 (454)
+|.|++|+|++|+.+ + ++..+++++ ++|+|.||+++||+.|||||+|||+... +++++.|..||++|
T Consensus 304 ~D~vi~a~G~~p~~~-~l~l~~~gl~~~~~~G~I~Vd~~~~Ts~~~IyA~GD~~~g~---------~~~~~~A~~~g~~a 373 (519)
T 3qfa_A 304 YNTVMLAIGRDACTR-KIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDK---------VELTPVAIQAGRLL 373 (519)
T ss_dssp ESEEEECSCEEESCS-SSCSTTTTCCCCTTTCCBCCCTTSBCSSTTEEECGGGBSSS---------CCCHHHHHHHHHHH
T ss_pred CCEEEEecCCcccCC-CCChhhcCcEEcCCCCeEeeCCCCccCCCCEEEEEeccCCC---------CccHHHHHHHHHHH
Confidence 999999999999998 5 567788887 5799999999999999999999998432 46889999999999
Q ss_pred HhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCC----CceEE---Ee--------ecCCccEEEEEE
Q psy1545 341 AKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN----DYEIL---LR--------VTRGEEYIKLVM 405 (454)
Q Consensus 341 a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~----~~~~~---~~--------~~~~~~~~k~~~ 405 (454)
|+||++.......+..+|..+|+.+ +++.+|+++.++... .+.+. +. .....+|+|+++
T Consensus 374 a~~i~g~~~~~~~~~~~p~~~~~~p------~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~ 447 (519)
T 3qfa_A 374 AQRLYAGSTVKCDYENVPTTVFTPL------EYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIIC 447 (519)
T ss_dssp HHHHHSCCCCCCCCTTCCEEECSSS------CEEEEECCHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEE
T ss_pred HHHHcCCCCccCCCCcCcEEEECCC------ceEEecCCHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEE
Confidence 9999975433223334555555544 999999999876532 23221 11 012468999999
Q ss_pred E---CCeEEEEEEEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 406 K---DGRMQGAVLIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 406 ~---~~~i~G~~~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+ +++|||+|++|+. +.++.++.+|++++|++||.+. .++++++++
T Consensus 448 ~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~~t~~~l~~~-~~~hPt~~E 497 (519)
T 3qfa_A 448 NTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDST-IGIHPVCAE 497 (519)
T ss_dssp ETTTTCEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHS-CCCTTCGGG
T ss_pred ecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcc-ccCCCChHH
Confidence 4 5999999999997 4678999999999999999664 445555555
No 39
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=2.7e-49 Score=400.61 Aligned_cols=382 Identities=18% Similarity=0.227 Sum_probs=283.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCC---C-------cccccccccccc---------------------c
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPS---G-------IVKAVTKTVPVT---------------------K 50 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~---~-------~~~~~~~~~~~~---------------------~ 50 (454)
++||+|||||+||++||..|++. |.+|+|||+. + ..+.|.++.+.+ .
T Consensus 9 ~~DvvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 9 DYDLIVIGGGSAGLACAKEAVLN--GARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 58999999999999999999998 8999999942 1 233333221111 0
Q ss_pred cc---cccchh------hhHH--------HHHhc-CcEEEcceEEEEeCcccEEEeccCc-EEEecEEEEecCCCCCCCC
Q psy1545 51 LL---SDITVE------ETDA--------NKFEG-LCTVIVDTVAAIDPRVNCVITEKQN-RIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 51 ~~---~~~~~~------~~~~--------~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g~-~i~~d~lviAtG~~p~~~~ 111 (454)
.. ...++. .... ..+.. +++++.+.+.++++....|.+.+|. .+.||+||||||++|+.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~~p~ 166 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPD 166 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEEECCCS
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcCCCC
Confidence 00 011111 1111 12233 8999999999999888778776674 7999999999999999988
Q ss_pred CCCceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccC
Q psy1545 112 YSPHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTN 189 (454)
Q Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~ 189 (454)
++..-....+.+++..+. ..+++++|||+|++|+|+|..+. |.+|+++++. .+++. +++++.+.+.+.+.+
T Consensus 167 i~G~~~~~~~~~~~~~~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~~~~~l~~~l~~-- 239 (483)
T 3dgh_A 167 IPGAVEYGITSDDLFSLD---REPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLRG-FDQQMAELVAASMEE-- 239 (483)
T ss_dssp STTHHHHCBCHHHHTTCS---SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSSTT-SCHHHHHHHHHHHHH--
T ss_pred CCCcccccCcHHHHhhhh---hcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCCcc-cCHHHHHHHHHHHHh--
Confidence 872111122444444332 24899999999999999999987 9999999984 55553 688888888777755
Q ss_pred CCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCc-----EEec
Q psy1545 190 TAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGH-----THAC 264 (454)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~-----~~~~ 264 (454)
.||++++++.+.+++..++ ..+.+.+.++. ++++
T Consensus 240 ---------------------------------------~Gv~i~~~~~v~~i~~~~~--~~~~v~~~~~~~~~~~~~~~ 278 (483)
T 3dgh_A 240 ---------------------------------------RGIPFLRKTVPLSVEKQDD--GKLLVKYKNVETGEESEDVY 278 (483)
T ss_dssp ---------------------------------------TTCCEEETEEEEEEEECTT--SCEEEEEEETTTCCEEEEEE
T ss_pred ---------------------------------------CCCEEEeCCEEEEEEEcCC--CcEEEEEecCCCCceeEEEc
Confidence 8999999999999987542 23567776653 7999
Q ss_pred CEEEEeeccCcCccccc--CCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHh
Q psy1545 265 DIVVSAIGVVPNSNIQV--HGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAK 342 (454)
Q Consensus 265 D~vi~a~G~~p~~~~~~--~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~ 342 (454)
|.|++|+|++|+.+ ++ +..++++++ |+|.||+++||+.|+|||+|||+... +++++.|..||++||+
T Consensus 279 D~vi~a~G~~p~~~-~l~l~~~gl~~~~-G~i~vd~~~~t~~~~IyA~GD~~~~~---------~~~~~~A~~~g~~aa~ 347 (483)
T 3dgh_A 279 DTVLWAIGRKGLVD-DLNLPNAGVTVQK-DKIPVDSQEATNVANIYAVGDIIYGK---------PELTPVAVLAGRLLAR 347 (483)
T ss_dssp SEEEECSCEEECCG-GGTGGGTTCCCBT-TBBCCCTTCBCSSTTEEECSTTBTTS---------CCCHHHHHHHHHHHHH
T ss_pred CEEEECcccccCcC-cCCchhcCccccC-CEEEECcCCccCCCCEEEEEcccCCC---------CccHHHHHHHHHHHHH
Confidence 99999999999998 65 667888887 99999999999999999999998432 3678899999999999
Q ss_pred hhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCC----CceEEE---ee--------cCCccEEEEEEE-
Q psy1545 343 CMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN----DYEILL---RV--------TRGEEYIKLVMK- 406 (454)
Q Consensus 343 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~----~~~~~~---~~--------~~~~~~~k~~~~- 406 (454)
||++.......+..+|+.+|+.+ +++.+|+++.++... .+.+.. .. ....+|+|++++
T Consensus 348 ~i~g~~~~~~~~~~~p~~~~~~p------~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~ 421 (483)
T 3dgh_A 348 RLYGGSTQRMDYKDVATTVFTPL------EYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAER 421 (483)
T ss_dssp HHHSCCCCCCCCTTCCEEECSSS------EEEEEECCHHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEES
T ss_pred HHcCCCCCcCCCCCCCEEEECCC------ccEEEeCCHHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEec
Confidence 99986432223334566666655 899999999776532 222221 00 124689999993
Q ss_pred --CCeEEEEEEEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 407 --DGRMQGAVLIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 407 --~~~i~G~~~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+++|||+|++|+. +.++.++.+|++++|++||.+. .++++++.+
T Consensus 422 ~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~-~~~hPt~~e 469 (483)
T 3dgh_A 422 HGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINT-VGIHPTTAE 469 (483)
T ss_dssp STTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTS-CCCSSCSGG
T ss_pred CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhc-ccCCCChHH
Confidence 5999999999997 4578999999999999999764 445555555
No 40
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1.2e-49 Score=400.41 Aligned_cols=378 Identities=18% Similarity=0.239 Sum_probs=283.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc-------------------cc----cccchh
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK-------------------LL----SDITVE 58 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~-------------------~~----~~~~~~ 58 (454)
++||+|||||++|+++|..|++. +.+|+|||+++..+.|.+..+.+. .+ ...++.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 81 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAF--GKRVALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWP 81 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhC--CCcEEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHH
Confidence 48999999999999999999997 899999999865444332211000 00 001110
Q ss_pred ----------hh----HHHHHhc-CcEEEcceEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCCCceeeeeccc
Q psy1545 59 ----------ET----DANKFEG-LCTVIVDTVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYSPHVITIRDTD 123 (454)
Q Consensus 59 ----------~~----~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~~~~~~~~~~~ 123 (454)
.. ....+.+ +++++.+++..++. +.|.+ +++++.||+||||||++|+.|+++.. ..+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~~p~i~G~-~~~~~~~ 157 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDA--HTIEV-EGQRLSADHIVIATGGRPIVPRLPGA-ELGITSD 157 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEE-TTEEEEEEEEEECCCEEECCCSCTTG-GGSBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccC--CEEEE-CCEEEEcCEEEECCCCCCCCCCCCCc-cceecHH
Confidence 00 1112233 89999988888875 45666 67789999999999999998887732 1233444
Q ss_pred hHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcc
Q psy1545 124 SVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMR 201 (454)
Q Consensus 124 ~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~ 201 (454)
++..+. ..+++++|||+|.+|+|+|..|. |.+|+++++.+++++. +++++...+.+.+.+
T Consensus 158 ~~~~~~---~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~-------------- 219 (463)
T 2r9z_A 158 GFFALQ---QQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-FDPLLSATLAENMHA-------------- 219 (463)
T ss_dssp HHHHCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH--------------
T ss_pred HHhhhh---ccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-cCHHHHHHHHHHHHH--------------
Confidence 544432 24899999999999999999986 9999999999998874 677777777777654
Q ss_pred cccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCc-EEecCEEEEeeccCcCcccc
Q psy1545 202 YNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGH-THACDIVVSAIGVVPNSNIQ 280 (454)
Q Consensus 202 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~-~~~~D~vi~a~G~~p~~~~~ 280 (454)
.||++++++.+++++.+++ .+.+.+++|+ ++++|.|++|+|++|+.+ +
T Consensus 220 ---------------------------~gv~i~~~~~v~~i~~~~~---~~~v~~~~G~~~i~~D~vv~a~G~~p~~~-~ 268 (463)
T 2r9z_A 220 ---------------------------QGIETHLEFAVAALERDAQ---GTTLVAQDGTRLEGFDSVIWAVGRAPNTR-D 268 (463)
T ss_dssp ---------------------------TTCEEESSCCEEEEEEETT---EEEEEETTCCEEEEESEEEECSCEEESCT-T
T ss_pred ---------------------------CCCEEEeCCEEEEEEEeCC---eEEEEEeCCcEEEEcCEEEECCCCCcCCC-C
Confidence 8999999999999987543 3678888998 899999999999999987 4
Q ss_pred c--CCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCC-cceecc
Q psy1545 281 V--HGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNE-PVIQDF 357 (454)
Q Consensus 281 ~--~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~~ 357 (454)
+ +..+++++++|+|.||+++||+.|+|||+|||++. +++++.|..||+.+|.||++..... ..+..+
T Consensus 269 l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~ 338 (463)
T 2r9z_A 269 LGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDITGR----------DQLTPVAIAAGRRLAERLFDGQSERKLDYDNI 338 (463)
T ss_dssp SCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGGGTS----------CCCHHHHHHHHHHHHHHHHSCCTTCCCCCSSC
T ss_pred CCchhcCCccCCCCCEeECCCCccCCCCEEEEeecCCC----------cccHHHHHHHHHHHHHHHcCCCCcccCCCCCC
Confidence 3 45678888889999999999999999999999863 3578899999999999999743211 122234
Q ss_pred ceeeeeeeeeecCeEEEEeecccCCcCC---CCceEEEe----------ecCCccEEEEEEE--CCeEEEEEEEcCCc--
Q psy1545 358 SFEMFTHMTKFFGYKVILLGLFNGQTLE---NDYEILLR----------VTRGEEYIKLVMK--DGRMQGAVLIGETE-- 420 (454)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~vG~~~~~~~~---~~~~~~~~----------~~~~~~~~k~~~~--~~~i~G~~~~g~~~-- 420 (454)
|..+|+. .+++++|+++.++.. ..+.+... .....+|+|++++ +++|+|+|++|+..
T Consensus 339 p~~~~~~------~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~ 412 (463)
T 2r9z_A 339 PTVVFAH------PPLSKVGLSEPEARERLGDVLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADE 412 (463)
T ss_dssp CEEECCS------SCEEEEECCHHHHHHHHCSCEEEEEEEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGG
T ss_pred CEEEeCC------CCeEEEcCCHHHHHhcCCCCEEEEEEEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHH
Confidence 5545544 489999998866542 22332210 1235689999994 89999999999873
Q ss_pred hHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 421 IEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 421 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
.++.++.+|++++|++++.+. .++++++.+
T Consensus 413 ~i~~~~~ai~~~~t~~~l~~~-~~~hPt~~e 442 (463)
T 2r9z_A 413 MLQGFAVAVKMGATKADFDNT-VAIHPGSAE 442 (463)
T ss_dssp TSHHHHHHHHTTCBHHHHHTS-CCCSSSSGG
T ss_pred HHHHHHHHHHCCCCHHHHhcC-ccCCCCHHH
Confidence 578999999999999999665 555666555
No 41
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.6e-49 Score=387.55 Aligned_cols=344 Identities=19% Similarity=0.281 Sum_probs=266.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccccc----ccccchhhhHHHHHhc-CcEEEcc-eE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKL----LSDITVEETDANKFEG-LCTVIVD-TV 76 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~i~~~~~-~v 76 (454)
.|++|||||+||++||..|++. + +|+|||+++...+ ..+.++.. ....++.....+++.+ +++++.+ +|
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~--g-~V~lie~~~~~~~--~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v 83 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQT--Y-EVTVIDKEPVPYY--SKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEA 83 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--S-EEEEECSSSSCCC--CSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCE
T ss_pred CcEEEECCcHHHHHHHHHHhhc--C-CEEEEECCCCCcc--ccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEE
Confidence 5899999999999999999998 6 9999999987542 11111111 1111122223344555 9999887 79
Q ss_pred EEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC--CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHh
Q psy1545 77 AAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS--PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHEL 154 (454)
Q Consensus 77 ~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l 154 (454)
+.++++.+.|. .+++++.||+||||||++|+.|+++ ++++++.+.+++.++.+.+.++++++|||+|++|+|+|..|
T Consensus 84 ~~id~~~~~V~-~~g~~~~~d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l 162 (367)
T 1xhc_A 84 KLIDRGRKVVI-TEKGEVPYDTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNL 162 (367)
T ss_dssp EEEETTTTEEE-ESSCEEECSEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHH
T ss_pred EEEECCCCEEE-ECCcEEECCEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHH
Confidence 99999988888 6788999999999999999998887 46777778888888877666679999999999999999998
Q ss_pred c--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceE
Q psy1545 155 S--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKIT 232 (454)
Q Consensus 155 ~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~ 232 (454)
. |.+|+++++.+++++ +++++.+.+.+.+++ .||+
T Consensus 163 ~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~-----------------------------------------~gV~ 199 (367)
T 1xhc_A 163 AEAGYHVKLIHRGAMFLG--LDEELSNMIKDMLEE-----------------------------------------TGVK 199 (367)
T ss_dssp HHTTCEEEEECSSSCCTT--CCHHHHHHHHHHHHH-----------------------------------------TTEE
T ss_pred HhCCCEEEEEeCCCeecc--CCHHHHHHHHHHHHH-----------------------------------------CCCE
Confidence 6 999999999999887 788888888777755 8999
Q ss_pred EEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCceeecCc
Q psy1545 233 IEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNVYAAGD 312 (454)
Q Consensus 233 i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD 312 (454)
+++++++++++.+ .+.+++|+ +++|.|++|+|++|+.+ +++..+++++ + +|.||+++||+.|+|||+||
T Consensus 200 i~~~~~v~~i~~~-------~v~~~~g~-i~~D~vi~a~G~~p~~~-ll~~~gl~~~-~-gi~Vd~~~~t~~~~IyA~GD 268 (367)
T 1xhc_A 200 FFLNSELLEANEE-------GVLTNSGF-IEGKVKICAIGIVPNVD-LARRSGIHTG-R-GILIDDNFRTSAKDVYAIGD 268 (367)
T ss_dssp EECSCCEEEECSS-------EEEETTEE-EECSCEEEECCEEECCH-HHHHTTCCBS-S-SEECCTTSBCSSTTEEECGG
T ss_pred EEcCCEEEEEEee-------EEEECCCE-EEcCEEEECcCCCcCHH-HHHhCCCCCC-C-CEEECCCcccCCCCEEEeEe
Confidence 9999999999732 36778887 99999999999999998 8888888874 4 49999999999999999999
Q ss_pred ccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCCceEEE
Q psy1545 313 VCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDYEILL 392 (454)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 392 (454)
|+..... .+++++.|..||+.||+||++... .|.+.+.+.+..+++++++++|+++.++. + +
T Consensus 269 ~a~~~~~------~~~~~~~A~~qg~~aa~~i~g~~~------~~~~~~~~~~~~~~~~~~~~vG~~~~~~~----~-~- 330 (367)
T 1xhc_A 269 CAEYSGI------IAGTAKAAMEQARVLADILKGEPR------RYNFKFRSTVFKFGKLQIAIIGNTKGEGK----W-I- 330 (367)
T ss_dssp GEEBTTB------CCCSHHHHHHHHHHHHHHHTTCCC------CCCSSCCEEEEEETTEEEEEEECCSSCEE----E-E-
T ss_pred eeecCCC------CccHHHHHHHHHHHHHHHhcCCCc------cCCCCCCceEEEECCceEEEECCCCCCCc----c-c-
Confidence 9874211 135889999999999999997421 22222222234678889999999886431 1 1
Q ss_pred eecCCccEEEEEEECCeEEEEEEEcCCchHHHHHHHH
Q psy1545 393 RVTRGEEYIKLVMKDGRMQGAVLIGETEIEEMCENLI 429 (454)
Q Consensus 393 ~~~~~~~~~k~~~~~~~i~G~~~~g~~~~~~~~~~~i 429 (454)
.+|+|+++++++|+|++++|+......+..+|
T Consensus 331 -----~~~~k~~~~~~~ilG~~~~g~~~~~~~~~~~i 362 (367)
T 1xhc_A 331 -----EDNTKVFYENGKIIGAVVFNDIRKATKLEKEI 362 (367)
T ss_dssp -----ETTEEEEC-----CEEEEESCHHHHHHHC---
T ss_pred -----ceEEEEEEECCEEEEEEEECChHHHHHHHHHH
Confidence 57999999889999999999987766666655
No 42
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=1.3e-49 Score=403.16 Aligned_cols=379 Identities=17% Similarity=0.189 Sum_probs=283.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc-------------------cc----cccchh
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK-------------------LL----SDITVE 58 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~-------------------~~----~~~~~~ 58 (454)
++||+|||||+||++||..|++. |.+|+|||+++..+.|.++.+.+. .+ ...++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~--G~~V~liE~~~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 85 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH--TDKVVLIEGGAYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGK 85 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT--CSCEEEEESSCSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCCCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHH
Confidence 37999999999999999999998 899999999886665543211110 00 001110
Q ss_pred ---h-------hH----HHHHhc--CcEEEcceEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC-Cceeeeec
Q psy1545 59 ---E-------TD----ANKFEG--LCTVIVDTVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS-PHVITIRD 121 (454)
Q Consensus 59 ---~-------~~----~~~~~~--~i~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~-~~~~~~~~ 121 (454)
. .. ...+.. +++++.+++.+.+.. +|.+.+++++.||+||||||++|+.|+++ .....+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~--~v~~~~~~~~~~d~lViATGs~p~~p~~~~~~~~~v~t 163 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEH--TLQVDDHSQVIAKRIVIATGSRPNYPEFLAAAGSRLLT 163 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETT--EEEETTTEEEEEEEEEECCCEECCCCHHHHTTGGGEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCC--EEEEcCCcEEEeCEEEEccCCCCcCCCCCCccCCcEEc
Confidence 0 01 111122 556778888888754 57777788999999999999999988754 21222344
Q ss_pred cchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhh
Q psy1545 122 TDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKR 199 (454)
Q Consensus 122 ~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~ 199 (454)
.+++..+. ..+++++|||+|++|+|+|..|. |.+|+++++++++++. +++++.+.+.+.+.+
T Consensus 164 ~~~~~~~~---~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~------------ 227 (492)
T 3ic9_A 164 NDNLFELN---DLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-QDEEMKRYAEKTFNE------------ 227 (492)
T ss_dssp HHHHTTCS---SCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-CCHHHHHHHHHHHHT------------
T ss_pred HHHHhhhh---hcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-CCHHHHHHHHHHHhh------------
Confidence 44444432 23899999999999999999997 9999999999998874 688888888777754
Q ss_pred cccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEec--CC--cEEecCEEEEeeccCc
Q psy1545 200 MRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT--NG--HTHACDIVVSAIGVVP 275 (454)
Q Consensus 200 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~--~g--~~~~~D~vi~a~G~~p 275 (454)
. |++++++.+++++.+++ .+.+.+. +| +++++|.|++|+|++|
T Consensus 228 -----------------------------~-V~i~~~~~v~~i~~~~~---~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 228 -----------------------------E-FYFDAKARVISTIEKED---AVEVIYFDKSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp -----------------------------T-SEEETTCEEEEEEECSS---SEEEEEECTTCCEEEEEESEEEECSCCEE
T ss_pred -----------------------------C-cEEEECCEEEEEEEcCC---EEEEEEEeCCCceEEEECCEEEEeeCCcc
Confidence 6 99999999999987653 3556664 67 6899999999999999
Q ss_pred Ccccc--cCCCCceecCCCceEec-cccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCc
Q psy1545 276 NSNIQ--VHGTPFELAPDCGIGVN-ELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEP 352 (454)
Q Consensus 276 ~~~~~--~~~~~l~~~~~g~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~ 352 (454)
+.+ + ++..+++++++|+|.|| +++||+.|+|||+|||++.+ ++++.|..||++||.||++.....+
T Consensus 275 ~~~-~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~ 343 (492)
T 3ic9_A 275 NVD-KLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTL----------TLLHEAADDGKVAGTNAGAYPVIAQ 343 (492)
T ss_dssp SCS-SSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSS----------CSHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred CCC-CCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCC----------ccHHHHHHHHHHHHHHHcCCCCCcc
Confidence 998 6 66778899889999999 99999999999999999743 6788999999999999997322111
Q ss_pred -ceeccceeeeeeeeeecCeEEEEeecccCCcCCC-------CceEEEe----------ecCCccEEEEEE--ECCeEEE
Q psy1545 353 -VIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN-------DYEILLR----------VTRGEEYIKLVM--KDGRMQG 412 (454)
Q Consensus 353 -~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~-------~~~~~~~----------~~~~~~~~k~~~--~~~~i~G 412 (454)
.+...|..+|+ +++++.+|+++.++... .+.+... .....+|+|+++ ++++|+|
T Consensus 344 ~~~~~~p~~~~~------~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG 417 (492)
T 3ic9_A 344 GQRRAPLSVVFT------EPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLG 417 (492)
T ss_dssp ECCCCCEEEECS------SSEEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEE
T ss_pred cCCCCCcEEEEC------CCCeEEecCCHHHHHhccCccCCccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEE
Confidence 11223444444 45999999999876533 3332211 123568999999 4799999
Q ss_pred EEEEcCCc--hHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 413 AVLIGETE--IEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 413 ~~~~g~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+|++|+.. .++.++.+|++++|++||.+.+ ++++++++
T Consensus 418 ~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~-~~hPt~~e 457 (492)
T 3ic9_A 418 AEMFGPAAEHIGHLLAWARQQQMTVQAMLTMP-FYHPVIEE 457 (492)
T ss_dssp EEEEETTHHHHHHHHHHHHHTTCBHHHHTTSC-CCTTCTHH
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCHHHHhhCC-CCCCChHH
Confidence 99999983 5789999999999999997654 34444443
No 43
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1.8e-49 Score=401.80 Aligned_cols=379 Identities=21% Similarity=0.270 Sum_probs=286.3
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc---------------------c--ccccchh
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK---------------------L--LSDITVE 58 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~---------------------~--~~~~~~~ 58 (454)
++||+|||||++|++||..|++. |.+|+|||+....+.|.+..+.+. . ....++.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 103 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL--GKRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWE 103 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--cCEEEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 37999999999999999999998 899999999665554433211110 0 0001111
Q ss_pred ----------hh----HHHHHhc-CcEEEcceEEEEeCcccEEEec-cCcEEEecEEEEecCCCCC-CCCCCCceeeeec
Q psy1545 59 ----------ET----DANKFEG-LCTVIVDTVAAIDPRVNCVITE-KQNRIKYKTLCICTGASPR-KIWYSPHVITIRD 121 (454)
Q Consensus 59 ----------~~----~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~-~g~~i~~d~lviAtG~~p~-~~~~~~~~~~~~~ 121 (454)
.. ....+.. +++++.+++..+++. .+.+. +++.+.||++|+|||++|. .|+++..- .+.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~--~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~-~~~~ 180 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEH--TLELSVTGERISAEKILIATGAKIVSNSAIKGSD-LCLT 180 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETT--EEEETTTCCEEEEEEEEECCCEEECCC--CBTGG-GSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCC--EEEEecCCeEEEeCEEEEccCCCcccCCCCCCcc-cccc
Confidence 01 1122233 899999999999865 46665 6789999999999999998 77776211 2334
Q ss_pred cchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhh
Q psy1545 122 TDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKR 199 (454)
Q Consensus 122 ~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~ 199 (454)
.+++..+.. .+++++|||+|++|+|+|..+. |.+|+++++.+++++. +++++...+.+.+.+
T Consensus 181 ~~~~~~~~~---~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~------------ 244 (484)
T 3o0h_A 181 SNEIFDLEK---LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-FDYDLRQLLNDAMVA------------ 244 (484)
T ss_dssp TTTGGGCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH------------
T ss_pred HHHHHhHHh---cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-cCHHHHHHHHHHHHH------------
Confidence 444444332 3899999999999999999886 9999999999998875 688887777777755
Q ss_pred cccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCccc
Q psy1545 200 MRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNI 279 (454)
Q Consensus 200 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~ 279 (454)
.||++++++.|++++.+++ .+.+.+++|+++++|.||+|+|++|+..
T Consensus 245 -----------------------------~Gv~i~~~~~V~~i~~~~~---~v~v~~~~g~~i~aD~Vi~A~G~~p~~~- 291 (484)
T 3o0h_A 245 -----------------------------KGISIIYEATVSQVQSTEN---CYNVVLTNGQTICADRVMLATGRVPNTT- 291 (484)
T ss_dssp -----------------------------HTCEEESSCCEEEEEECSS---SEEEEETTSCEEEESEEEECCCEEECCT-
T ss_pred -----------------------------CCCEEEeCCEEEEEEeeCC---EEEEEECCCcEEEcCEEEEeeCCCcCCC-
Confidence 8999999999999987653 4678889998999999999999999997
Q ss_pred c--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceecc
Q psy1545 280 Q--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDF 357 (454)
Q Consensus 280 ~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~ 357 (454)
+ ++..|++++++|+|.||+++||+.|+|||+|||++. +++++.|..||+++|+||++.......+..+
T Consensus 292 ~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~ 361 (484)
T 3o0h_A 292 GLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGH----------IQLTPVAIHDAMCFVKNAFENTSTTPDYDLI 361 (484)
T ss_dssp TCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGTS----------CCCHHHHHHHHHHHHHHHHC---CCCCCTTC
T ss_pred CCChhhcCceECCCCCEeECCCCCCCCCCEEEEEecCCC----------CcCHHHHHHHHHHHHHHHcCCCCCcCCCCCC
Confidence 5 456688888899999999999999999999999874 3688899999999999999854322233345
Q ss_pred ceeeeeeeeeecCeEEEEeecccCCcCCCCc--eEEE---e-------ecCCccEEEEEE--ECCeEEEEEEEcCC--ch
Q psy1545 358 SFEMFTHMTKFFGYKVILLGLFNGQTLENDY--EILL---R-------VTRGEEYIKLVM--KDGRMQGAVLIGET--EI 421 (454)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~--~~~~---~-------~~~~~~~~k~~~--~~~~i~G~~~~g~~--~~ 421 (454)
|..+|+.+ +++.+|+++.++...+. .+.. . .....+|+|+++ ++++|+|+|++|+. +.
T Consensus 362 p~~~~~~p------~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~ 435 (484)
T 3o0h_A 362 TTAVFSQP------EIGTVGLSEEDALHRYKRVEIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEI 435 (484)
T ss_dssp CEEECCSS------CEEEEECCHHHHHHHCSEEEEEEEEECCHHHHHHTCCCCEEEEEEEETTTCBEEEEEEESTTHHHH
T ss_pred cEEEECCC------CEEEeeCCHHHHHHcCCCEEEEEecCCcchhhccCCCCcEEEEEEEECCCCEEEEEEEECcCHHHH
Confidence 66666554 89999999987654332 2211 1 113568999999 47999999999987 35
Q ss_pred HHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 422 EEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 422 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
++.++.+|++++|++|+.+. .++++++.+
T Consensus 436 i~~~~~ai~~~~t~~~l~~~-~~~hPt~~e 464 (484)
T 3o0h_A 436 AQLIGISLKGKLTKDIFDKT-MAVHPTMSE 464 (484)
T ss_dssp HHHHHHHHHTTCBHHHHHHS-CCCSSCSGG
T ss_pred HHHHHHHHHCCCCHHHHhcc-ccCCCChHH
Confidence 78899999999999999665 445555554
No 44
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=9.1e-49 Score=399.80 Aligned_cols=378 Identities=22% Similarity=0.276 Sum_probs=282.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccc-cccccccc------------------------cccccc--
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVK-AVTKTVPV------------------------TKLLSD-- 54 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~-~~~~~~~~------------------------~~~~~~-- 54 (454)
++||+|||||++|+++|..|++. |.+|+|||+++.++ .|.+..+. +.....
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAM--GGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 48999999999999999999998 89999999998433 32221111 000000
Q ss_pred --cchhhh----HH---HHH-----hc-CcEEE-cceEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC-Ccee
Q psy1545 55 --ITVEET----DA---NKF-----EG-LCTVI-VDTVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS-PHVI 117 (454)
Q Consensus 55 --~~~~~~----~~---~~~-----~~-~i~~~-~~~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~-~~~~ 117 (454)
..+... .. ..+ .+ +++++ .+++.++++ +.|.+. ++.+.||+||+|||++|+.|+++ ....
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~~p~i~G~~~~ 197 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPGTLDVPGVNAK 197 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECCCCCSTTTTSB
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCCCCCCCCcccC
Confidence 011111 11 344 45 89998 889999986 456664 77899999999999999998887 1111
Q ss_pred eeeccchHH-HHHHHhhcC-CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCCh
Q psy1545 118 TIRDTDSVA-VLQEKLKSA-KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKP 193 (454)
Q Consensus 118 ~~~~~~~~~-~l~~~~~~~-~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~ 193 (454)
.+.+.+++. .+.. .+ ++++|||+|++|+|+|..+. |.+|+++++.+++++. +++++...+.+.+.+
T Consensus 198 ~v~~~~~~~~~l~~---~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~------ 267 (523)
T 1mo9_A 198 GVFDHATLVEELDY---EPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-KDNETRAYVLDRMKE------ 267 (523)
T ss_dssp TEEEHHHHHHHCCS---CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-CSHHHHHHHHHHHHH------
T ss_pred cEeeHHHHHHHHHh---cCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-ccHHHHHHHHHHHHh------
Confidence 233445554 3322 25 99999999999999999986 9999999999998885 688887777777755
Q ss_pred hhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccc--eEEEecCCc-EEecCEEEEe
Q psy1545 194 ETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCN--AYVKLTNGH-THACDIVVSA 270 (454)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~--~~v~~~~g~-~~~~D~vi~a 270 (454)
.||++++++.|++++.+++ +.. +.+.+++|+ ++++|.||+|
T Consensus 268 -----------------------------------~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~G~~~i~aD~Vv~A 311 (523)
T 1mo9_A 268 -----------------------------------QGMEIISGSNVTRIEEDAN-GRVQAVVAMTPNGEMRIETDFVFLG 311 (523)
T ss_dssp -----------------------------------TTCEEESSCEEEEEEECTT-SBEEEEEEEETTEEEEEECSCEEEC
T ss_pred -----------------------------------CCcEEEECCEEEEEEEcCC-CceEEEEEEECCCcEEEEcCEEEEC
Confidence 8999999999999987542 111 567888887 8999999999
Q ss_pred eccCcCcccccCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCC
Q psy1545 271 IGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKN 350 (454)
Q Consensus 271 ~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 350 (454)
+|++|+.+.+++..|++++++|+|.||+++||+.|+|||+|||++.+ ++++.|..||++||.||++...
T Consensus 312 ~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~- 380 (523)
T 1mo9_A 312 LGEQPRSAELAKILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIGGP----------MEMFKARKSGCYAARNVMGEKI- 380 (523)
T ss_dssp CCCEECCHHHHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGCSS----------CSHHHHHHHHHHHHHHHTTCCC-
T ss_pred cCCccCCccCHHHcCCccCCCCCEEECCCCccCCCCEEEEeecCCCc----------ccHHHHHHHHHHHHHHHcCCCC-
Confidence 99999985125666788888899999999999999999999999743 5788999999999999997421
Q ss_pred CcceeccceeeeeeeeeecCeEEEEeecccCCcCCCCceEEE-----ee-----------------------cCCccEEE
Q psy1545 351 EPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDYEILL-----RV-----------------------TRGEEYIK 402 (454)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~-----~~-----------------------~~~~~~~k 402 (454)
...+..+|+.+| ++.+++++|+++.++...++++.. .. ....+|+|
T Consensus 381 ~~~~~~~p~~~~------~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 454 (523)
T 1mo9_A 381 SYTPKNYPDFLH------THYEVSFLGMGEEEARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQK 454 (523)
T ss_dssp CCCCCSCCEEEE------SSSEEEEEECCHHHHHHTTCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEE
T ss_pred CCCCCCCCeEEE------CCCceEEEeCCHHHHHhCCCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEE
Confidence 111223444444 445899999998766433332221 11 22357999
Q ss_pred EEE--ECCeEEEEEEEcCCc--hHHHHHHHHhcCCCcchhhhh---ccCCCC
Q psy1545 403 LVM--KDGRMQGAVLIGETE--IEEMCENLILNQLDLTDIADD---LLNPNI 447 (454)
Q Consensus 403 ~~~--~~~~i~G~~~~g~~~--~~~~~~~~i~~~~~~~~~~~~---~~~~~~ 447 (454)
+++ ++++|+|+|++|+.. .++.++.+|++++|++++.+. ..||++
T Consensus 455 ~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~~Pt~ 506 (523)
T 1mo9_A 455 IVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLTVDELGDMDELFLNPTH 506 (523)
T ss_dssp EEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSCC
T ss_pred EEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHhCCcceECCCH
Confidence 999 479999999999974 479999999999999999776 245554
No 45
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=6.2e-49 Score=397.67 Aligned_cols=381 Identities=18% Similarity=0.190 Sum_probs=280.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc-ccccc-------------------ccc-ccc-----cc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV-TKTVP-------------------VTK-LLS-----DI 55 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~-~~~~~-------------------~~~-~~~-----~~ 55 (454)
++||+|||||++|+++|..|++. |.+|+|||+++.+++. .+..+ +.. .+. ..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~ 82 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL--GFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKI 82 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 48999999999999999999998 8999999996554332 11100 000 000 00
Q ss_pred chhh--------------hHHHHHhc-CcEEEcceEEEEeCcccEEEeccC--cE------EEecEEEEecCCCCCCCCC
Q psy1545 56 TVEE--------------TDANKFEG-LCTVIVDTVAAIDPRVNCVITEKQ--NR------IKYKTLCICTGASPRKIWY 112 (454)
Q Consensus 56 ~~~~--------------~~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g--~~------i~~d~lviAtG~~p~~~~~ 112 (454)
++.. .....+.+ +++++.+.....+.+...|.+.+| +. +.||+||+|||++|+.++.
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~~g 162 (478)
T 1v59_A 83 NVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPG 162 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCCCC
Confidence 1100 01122334 899988877666655556666566 56 9999999999998854332
Q ss_pred -C-CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhcc
Q psy1545 113 -S-PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKT 188 (454)
Q Consensus 113 -~-~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~ 188 (454)
+ .+ ..+.+.+++..+.+ .+++++|||+|++|+|+|..|+ |.+||++++.+++++ .+++++.+.+.+.+.+
T Consensus 163 ~~~~~-~~v~~~~~~~~~~~---~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~- 236 (478)
T 1v59_A 163 IEIDE-EKIVSSTGALSLKE---IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-SMDGEVAKATQKFLKK- 236 (478)
T ss_dssp CCCCS-SSEECHHHHTTCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-SSCHHHHHHHHHHHHH-
T ss_pred CCCCC-ceEEcHHHHHhhhc---cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-ccCHHHHHHHHHHHHH-
Confidence 2 22 23455555554432 3899999999999999999986 999999999999988 4788888888777755
Q ss_pred CCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEc--CCCCccceEEEec-----CCcE
Q psy1545 189 NTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVD--SEDDTCNAYVKLT-----NGHT 261 (454)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~--~~~~~~~~~v~~~-----~g~~ 261 (454)
.||++++++.++++.. +++ .+.+.++ ++++
T Consensus 237 ----------------------------------------~gv~i~~~~~v~~i~~~~~~~---~~~v~~~~~~~g~~~~ 273 (478)
T 1v59_A 237 ----------------------------------------QGLDFKLSTKVISAKRNDDKN---VVEIVVEDTKTNKQEN 273 (478)
T ss_dssp ----------------------------------------TTCEEECSEEEEEEEEETTTT---EEEEEEEETTTTEEEE
T ss_pred ----------------------------------------CCCEEEeCCEEEEEEEecCCC---eEEEEEEEcCCCCceE
Confidence 8999999999999986 432 4556665 4578
Q ss_pred EecCEEEEeeccCcCcc-cccCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHH
Q psy1545 262 HACDIVVSAIGVVPNSN-IQVHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYA 340 (454)
Q Consensus 262 ~~~D~vi~a~G~~p~~~-~~~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~a 340 (454)
+++|.|++|+|++|+.+ .+++..|++++++|+|.||+++||+.|+|||+|||+..+ ++++.|..||+.|
T Consensus 274 ~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~a 343 (478)
T 1v59_A 274 LEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFGP----------MLAHKAEEEGIAA 343 (478)
T ss_dssp EEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHH
T ss_pred EECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCCccCCCCEEEeeccCCCc----------ccHHHHHHHHHHH
Confidence 99999999999999986 245777888888899999999999999999999999743 5788999999999
Q ss_pred HhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCC--ceEEEe----------ecCCccEEEEEEE--
Q psy1545 341 AKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEND--YEILLR----------VTRGEEYIKLVMK-- 406 (454)
Q Consensus 341 a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~--~~~~~~----------~~~~~~~~k~~~~-- 406 (454)
|+||++... ...+..+|+.. +++.+++++|+++.++...+ +.+... .....+|+|++++
T Consensus 344 a~~i~~~~~-~~~~~~~p~~~------~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 416 (478)
T 1v59_A 344 VEMLKTGHG-HVNYNNIPSVM------YSHPEVAWVGKTEEQLKEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSK 416 (478)
T ss_dssp HHHHHHSCC-CCCTTSCCEEE------CSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETT
T ss_pred HHHHcCCCC-CCCCCCCCEEE------EcCCcEEEEECCHHHHHHcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECC
Confidence 999997421 11122234333 44559999999987764333 222211 1134689999994
Q ss_pred CCeEEEEEEEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 407 DGRMQGAVLIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 407 ~~~i~G~~~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+++|+|+|++|+. +.++.++.+|+++++++++.+. .++++++.+
T Consensus 417 ~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~-~~~~Pt~~e 462 (478)
T 1v59_A 417 TERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARV-CHAHPTLSE 462 (478)
T ss_dssp TCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTS-CCCTTCTTH
T ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhC-CCCCCCHHH
Confidence 8999999999997 4579999999999999999654 556666554
No 46
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.3e-47 Score=385.34 Aligned_cols=371 Identities=19% Similarity=0.238 Sum_probs=275.6
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc----------------------cc----ccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK----------------------LL----SDI 55 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~----------------------~~----~~~ 55 (454)
++|++|||||+||++||..|++. +.+|+|||++...+.|.++.+.+. .+ ...
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL--GIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH--TCCEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCEEEEEccCCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCcc
Confidence 58999999999999999999998 899999999655443332211100 00 001
Q ss_pred chhh------h--------HHHHHhc-CcEEEcceEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCC-CCCceeee
Q psy1545 56 TVEE------T--------DANKFEG-LCTVIVDTVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIW-YSPHVITI 119 (454)
Q Consensus 56 ~~~~------~--------~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~-~~~~~~~~ 119 (454)
++.. . ....+.+ +++++.+++..++. ++|.+++ +.+.||+||||||++|+.|+ ++... .+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~--~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~~~-~v 158 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDG--KQVEVDG-QRIQCEHLLLATGSSSVELPMLPLGG-PV 158 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEET--TEEEETT-EEEECSEEEECCCEEECCBTTBCCBT-TE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccC--CEEEEee-EEEEeCEEEEeCCCCCCCCCCCCccC-cE
Confidence 1110 0 1123334 89999998887764 5677754 78999999999999998776 44111 23
Q ss_pred eccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhh
Q psy1545 120 RDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIF 197 (454)
Q Consensus 120 ~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~ 197 (454)
.+..++..+.+ .+++++|||+|++|+|+|..|+ |.+|+++++++++++ .+++++.+.+.+.+.+
T Consensus 159 ~~~~~~~~~~~---~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~---------- 224 (458)
T 1lvl_A 159 ISSTEALAPKA---LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-TYDSELTAPVAESLKK---------- 224 (458)
T ss_dssp ECHHHHTCCSS---CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHH----------
T ss_pred ecHHHHhhhhc---cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHH----------
Confidence 45555444322 4899999999999999999987 999999999999987 4788887777777755
Q ss_pred hhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCC--cEEecCEEEEeeccCc
Q psy1545 198 KRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNG--HTHACDIVVSAIGVVP 275 (454)
Q Consensus 198 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~D~vi~a~G~~p 275 (454)
.||++++++.+++++. + . +.+..++| +++++|.|++|+|++|
T Consensus 225 -------------------------------~gv~i~~~~~v~~i~~-~--~--v~v~~~~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 225 -------------------------------LGIALHLGHSVEGYEN-G--C--LLANDGKGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp -------------------------------HTCEEETTCEEEEEET-T--E--EEEECSSSCCCEECCSCEEECCCEEE
T ss_pred -------------------------------CCCEEEECCEEEEEEe-C--C--EEEEECCCceEEEECCEEEECcCCCc
Confidence 8999999999999987 4 2 44554456 6899999999999999
Q ss_pred Ccccc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcc
Q psy1545 276 NSNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPV 353 (454)
Q Consensus 276 ~~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~ 353 (454)
+.+ + ++..|+.++++ +|.||+++||+.|+|||+|||+..+ ++++.|..||+.||.||++... ...
T Consensus 269 ~~~-~l~~~~~g~~~~~~-~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~-~~~ 335 (458)
T 1lvl_A 269 RTK-GFNLECLDLKMNGA-AIAIDERCQTSMHNVWAIGDVAGEP----------MLAHRAMAQGEMVAEIIAGKAR-RFE 335 (458)
T ss_dssp CCS-SSSGGGSCCCEETT-EECCCTTCBCSSTTEEECGGGGCSS----------CCHHHHHHHHHHHHHHHTTCCC-CCC
T ss_pred CCC-CCCcHhcCCcccCC-EEeECCCCcCCCCCEEEeeccCCCc----------ccHHHHHHHHHHHHHHhcCCCc-cCC
Confidence 997 5 46678888777 9999999999999999999999743 5788999999999999997321 111
Q ss_pred eeccceeeeeeeeeecCeEEEEeecccCCcCCCCceEEE--e----------ecCCccEEEEEE--ECCeEEEEEEEcCC
Q psy1545 354 IQDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDYEILL--R----------VTRGEEYIKLVM--KDGRMQGAVLIGET 419 (454)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~--~----------~~~~~~~~k~~~--~~~~i~G~~~~g~~ 419 (454)
+...|+ ..+++.+++.+|+++.++...+++... . .....+|+|+++ ++++|+|++++|+.
T Consensus 336 ~~~~p~------~~~~~p~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~ 409 (458)
T 1lvl_A 336 PAAIAA------VCFTDPEVVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVA 409 (458)
T ss_dssp CSCCCE------EECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETT
T ss_pred CCCCCE------EEECCCCeEEEeCCHHHHHHcCCCEEEEEEECccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCC
Confidence 112233 234566999999998765433322221 1 123468999999 47999999999998
Q ss_pred --chHHHHHHHHhcCCCcchhhhhc-cCCCC
Q psy1545 420 --EIEEMCENLILNQLDLTDIADDL-LNPNI 447 (454)
Q Consensus 420 --~~~~~~~~~i~~~~~~~~~~~~~-~~~~~ 447 (454)
+.++.+..+|++++|++++.+.+ .||++
T Consensus 410 a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~ 440 (458)
T 1lvl_A 410 VSELSTAFAQSLEMGACLEDVAGTIHAHPTL 440 (458)
T ss_dssp GGGHHHHHHHHHHHTCBHHHHHTSCCCTTCT
T ss_pred HHHHHHHHHHHHHCCCCHHHHhhCcCCCCCH
Confidence 46899999999999999997653 34444
No 47
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=3.3e-48 Score=389.84 Aligned_cols=380 Identities=18% Similarity=0.224 Sum_probs=280.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccc-ccccccccc------------------cc----cccchh
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKA-VTKTVPVTK------------------LL----SDITVE 58 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~-~~~~~~~~~------------------~~----~~~~~~ 58 (454)
++||+|||||+||++||..|++. +.+|+|||+++.+++ +.++...+. .+ ...++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~ 78 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL--GMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLP 78 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHH
T ss_pred CCCEEEECCChhHHHHHHHHHHC--CCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHH
Confidence 47999999999999999999998 899999999965433 222111000 00 001111
Q ss_pred h--------------hHHHHHhc-CcEEEcceEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCCC-ceeeeecc
Q psy1545 59 E--------------TDANKFEG-LCTVIVDTVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYSP-HVITIRDT 122 (454)
Q Consensus 59 ~--------------~~~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~~-~~~~~~~~ 122 (454)
. .....+.+ +++++.+++..+++....|.+ +|.++.||+||+|||++|+.|++++ ....+.+.
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~-~g~~~~~d~lviAtG~~p~~~~~~g~~~~~v~~~ 157 (455)
T 2yqu_A 79 ALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEE-TGEELEARYILIATGSAPLIPPWAQVDYERVVTS 157 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETT-TCCEEEEEEEEECCCEEECCCTTBCCCSSSEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEee-CCEEEEecEEEECCCCCCCCCCCCCCCcCcEech
Confidence 0 01123334 899998888777765444544 5778999999999999998887661 11123444
Q ss_pred chHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhc
Q psy1545 123 DSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRM 200 (454)
Q Consensus 123 ~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~ 200 (454)
+++..+. ..+++++|||+|++|+|+|..|. |.+|+++++.+++++. +++++.+.+.+.+.+
T Consensus 158 ~~~~~~~---~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~~~l~~------------- 220 (455)
T 2yqu_A 158 TEALSFP---EVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-MDLEVSRAAERVFKK------------- 220 (455)
T ss_dssp HHHTCCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHH-------------
T ss_pred HHhhccc---cCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-cCHHHHHHHHHHHHH-------------
Confidence 4443332 23799999999999999999986 9999999999998874 677777777777654
Q ss_pred ccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccc
Q psy1545 201 RYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQ 280 (454)
Q Consensus 201 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~ 280 (454)
.||+++++++|++++.+++ .+.+.+++|+++++|.||+|+|++|+.+ +
T Consensus 221 ----------------------------~Gv~i~~~~~V~~i~~~~~---~v~v~~~~g~~i~~D~vv~A~G~~p~~~-~ 268 (455)
T 2yqu_A 221 ----------------------------QGLTIRTGVRVTAVVPEAK---GARVELEGGEVLEADRVLVAVGRRPYTE-G 268 (455)
T ss_dssp ----------------------------HTCEEECSCCEEEEEEETT---EEEEEETTSCEEEESEEEECSCEEECCT-T
T ss_pred ----------------------------CCCEEEECCEEEEEEEeCC---EEEEEECCCeEEEcCEEEECcCCCcCCC-C
Confidence 8999999999999987553 4667777888999999999999999987 5
Q ss_pred --cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccc
Q psy1545 281 --VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFS 358 (454)
Q Consensus 281 --~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~ 358 (454)
++..++.++++|+|.||+++||+.|+|||+|||+..+ ++++.|..||+.+|+||++... ...+...|
T Consensus 269 l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~-~~~~~~~p 337 (455)
T 2yqu_A 269 LSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVRGP----------MLAHKASEEGIAAVEHMVRGFG-HVDYQAIP 337 (455)
T ss_dssp CCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHSCC-CCCGGGCC
T ss_pred CChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCCCc----------cCHHHHHHhHHHHHHHHcCCCc-cCCCCCCC
Confidence 5666788877899999999999999999999998743 5788999999999999997421 11111223
Q ss_pred eeeeeeeeeecCeEEEEeecccCCcCCCCceEEE--e----------ecCCccEEEEEEE--CCeEEEEEEEcCC--chH
Q psy1545 359 FEMFTHMTKFFGYKVILLGLFNGQTLENDYEILL--R----------VTRGEEYIKLVMK--DGRMQGAVLIGET--EIE 422 (454)
Q Consensus 359 ~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~--~----------~~~~~~~~k~~~~--~~~i~G~~~~g~~--~~~ 422 (454)
+. .+++.+++.+|+++.++...+++... . .....+|+|++++ +++|+|++++|+. +.+
T Consensus 338 ~~------~~~~~~~a~~G~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i 411 (455)
T 2yqu_A 338 SV------VYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVL 411 (455)
T ss_dssp EE------ECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHH
T ss_pred EE------EEcCCceEEEECCHHHHHHcCCCEEEEEEEcccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHH
Confidence 33 34556999999988765433322221 1 1234689999994 8999999999998 457
Q ss_pred HHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 423 EMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 423 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+.+..+|+++++++++.+. .++++++.+
T Consensus 412 ~~~~~ai~~~~~~~~~~~~-~~~~Pt~~e 439 (455)
T 2yqu_A 412 AEAALALFFKASAEDLGRA-PHAHPSLSE 439 (455)
T ss_dssp HHHHHHHHTTCBHHHHHHS-CCCSSCTHH
T ss_pred HHHHHHHHCCCCHHHHhhc-ccCCCCHHH
Confidence 8999999999999999664 545555443
No 48
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.1e-45 Score=363.43 Aligned_cols=353 Identities=18% Similarity=0.277 Sum_probs=268.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccc----cchhhhHHHHH-hc-CcEEEcc-
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSD----ITVEETDANKF-EG-LCTVIVD- 74 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~-~i~~~~~- 74 (454)
++||+|||||+||++||..|++.++..+|+++|+++... +..+.++..+.. .++.......+ .+ +++++.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 81 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRS--YSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHT 81 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCE--ECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCc--cCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCC
Confidence 489999999999999999999985557899999986321 222222221111 11111222333 34 8999854
Q ss_pred eEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC----CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHH
Q psy1545 75 TVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS----PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATEL 150 (454)
Q Consensus 75 ~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~ 150 (454)
++..+++..+.|.+. +..+.||+||+|||++|+.|+++ +++++..+..++..+...+..+++++|||+|++|+|+
T Consensus 82 ~v~~i~~~~~~v~~~-~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~ 160 (384)
T 2v3a_A 82 RVTGIDPGHQRIWIG-EEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEF 160 (384)
T ss_dssp CCCEEEGGGTEEEET-TEEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHH
T ss_pred EEEEEECCCCEEEEC-CcEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHH
Confidence 799999888888885 45799999999999999988876 3466666777777777777779999999999999999
Q ss_pred HHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccC
Q psy1545 151 VHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRD 228 (454)
Q Consensus 151 a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 228 (454)
|..+. |.+|+++++.+++++..+++++.+.+.+.+.+
T Consensus 161 A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~----------------------------------------- 199 (384)
T 2v3a_A 161 ANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEG----------------------------------------- 199 (384)
T ss_dssp HHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHT-----------------------------------------
T ss_pred HHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHH-----------------------------------------
Confidence 99986 99999999999988876677777777777754
Q ss_pred CceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCcee
Q psy1545 229 TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNVY 308 (454)
Q Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~Iy 308 (454)
.||++++++.|++++.+++ .+.+.+++|+++++|.|++|+|++|+.+ +++..+++++ +| |.||+++||+.|+||
T Consensus 200 ~gv~i~~~~~v~~i~~~~~---~~~v~~~~g~~i~~d~vv~a~G~~p~~~-l~~~~g~~~~-~g-i~vd~~~~t~~~~Iy 273 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKKAGE---GLEAHLSDGEVIPCDLVVSAVGLRPRTE-LAFAAGLAVN-RG-IVVDRSLRTSHANIY 273 (384)
T ss_dssp TTCEEEESCCEEEEEEETT---EEEEEETTSCEEEESEEEECSCEEECCH-HHHHTTCCBS-SS-EEECTTCBCSSTTEE
T ss_pred cCCEEEeCCEEEEEEecCC---EEEEEECCCCEEECCEEEECcCCCcCHH-HHHHCCCCCC-CC-EEECCCCCCCCCCEE
Confidence 8999999999999987542 4678888999999999999999999998 8888888876 56 999999999999999
Q ss_pred ecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCCCc
Q psy1545 309 AAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLENDY 388 (454)
Q Consensus 309 a~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~ 388 (454)
|+|||+..... ..++++.|..||+++|+||++... ...+..+|+.+|+ .++++..+|.+.... .
T Consensus 274 A~GD~~~~~~~------~~~~~~~a~~~g~~~a~~i~g~~~-~~~~~~~p~~~~~-----~~~~~~~~g~~~~~~-~--- 337 (384)
T 2v3a_A 274 ALGDCAEVDGL------NLLYVMPLMACARALAQTLAGNPS-QVAYGPMPVTVKT-----PACPLVVSPPPRGMD-G--- 337 (384)
T ss_dssp ECGGGEEETTB------CCCSHHHHHHHHHHHHHHHTTCCC-CCCCCCCCEEECC-----TTSCEEEECCCTTCC-C---
T ss_pred EeeeeeeECCC------CcchHHHHHHHHHHHHHHhcCCCc-cCCCCCcceEEEE-----CCeeEEEecCCCCCC-c---
Confidence 99999964211 134678899999999999997431 1112234444443 356788899765321 1
Q ss_pred eEEEeecCCccEEEEEE-ECCeEEEEEEEcCCch
Q psy1545 389 EILLRVTRGEEYIKLVM-KDGRMQGAVLIGETEI 421 (454)
Q Consensus 389 ~~~~~~~~~~~~~k~~~-~~~~i~G~~~~g~~~~ 421 (454)
...... ...+|.|+++ ++++|+|+|++|+...
T Consensus 338 ~~~~~~-~~~g~~~~~~~~~~~i~G~~~~g~~a~ 370 (384)
T 2v3a_A 338 QWLVEG-SGTDLKVLCRDTAGRVIGYALTGAAVN 370 (384)
T ss_dssp EEEEEE-ETTEEEEEEECTTSCEEEEEEEGGGGG
T ss_pred eEEEEe-cCCcEEEEEEccCCEEEEEEEECcchH
Confidence 111112 2457999988 4899999999999843
No 49
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=2.9e-46 Score=387.99 Aligned_cols=385 Identities=19% Similarity=0.235 Sum_probs=272.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCC-C--------ccccccccccccc---------------------c
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPS-G--------IVKAVTKTVPVTK---------------------L 51 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~-~--------~~~~~~~~~~~~~---------------------~ 51 (454)
++||+|||||+||++||..|++. |.+|+|||+. + ..+.|.++...+. .
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~--g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKY--GAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccEEEECCCccHHHHHHHHHhC--CCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 47999999999999999999998 8999999973 2 1121111111000 0
Q ss_pred cc----ccchh------hhH--------HHHHhc-CcEEEcceEEEEeCcccEEEeccC--cEEEecEEEEecCCCCCCC
Q psy1545 52 LS----DITVE------ETD--------ANKFEG-LCTVIVDTVAAIDPRVNCVITEKQ--NRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 52 ~~----~~~~~------~~~--------~~~~~~-~i~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lviAtG~~p~~~ 110 (454)
.. ..++. ... ...+.. +++++.+.+.++++....+...+| .++.||+||||||++|+.|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~p 264 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYP 264 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECCC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCCC
Confidence 00 01110 001 111333 899999999999887766666566 4799999999999999998
Q ss_pred CCCCceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhcc
Q psy1545 111 WYSPHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKT 188 (454)
Q Consensus 111 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~ 188 (454)
+++.......+.+++..+. ..+++++|||||++|+|+|..|+ |.+||+++|. .+++. +++++.+.+.+.+.+
T Consensus 265 ~i~G~~~~~~~~~~~~~~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~~~~~~~~~l~~- 338 (598)
T 2x8g_A 265 EIPGAVEYGITSDDLFSLP---YFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRG-FDQQMAEKVGDYMEN- 338 (598)
T ss_dssp SSTTHHHHCEEHHHHTTCS---SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHHHHHHHHHHHHH-
T ss_pred CCCCcccceEcHHHHhhCc---cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCc-CCHHHHHHHHHHHHh-
Confidence 8872111112333333221 24789999999999999999986 9999999988 55553 677777777776654
Q ss_pred CCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcC------CCCccceEE--EecCCc
Q psy1545 189 NTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDS------EDDTCNAYV--KLTNGH 260 (454)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~------~~~~~~~~v--~~~~g~ 260 (454)
.||++++++.+.++... ++....+.+ .+.+|+
T Consensus 339 ----------------------------------------~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~ 378 (598)
T 2x8g_A 339 ----------------------------------------HGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGK 378 (598)
T ss_dssp ----------------------------------------TTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSC
T ss_pred ----------------------------------------CCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCc
Confidence 89999999988887532 100112333 346776
Q ss_pred EEe--cCEEEEeeccCcCcccc--cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHH
Q psy1545 261 THA--CDIVVSAIGVVPNSNIQ--VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHM 336 (454)
Q Consensus 261 ~~~--~D~vi~a~G~~p~~~~~--~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~ 336 (454)
+++ +|.|++|+|++|+.+ + ++..|++++++|+|.||+++||+.|+|||+|||+... +.+++.|..|
T Consensus 379 ~~~~~~D~vi~a~G~~p~~~-~l~~~~~gl~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~---------~~~~~~A~~~ 448 (598)
T 2x8g_A 379 KFEEEFETVIFAVGREPQLS-KVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGK---------PQLTPVAIQA 448 (598)
T ss_dssp EEEEEESEEEECSCEEECGG-GTBCGGGCCCBCTTSCBCCCTTSBCSSTTEEECGGGBTTS---------CCCHHHHHHH
T ss_pred EEeccCCEEEEEeCCccccC-ccCchhcCceECCCCcEEeCCCCcCCCCCEEEEeeecCCC---------CccHHHHHHh
Confidence 555 999999999999998 6 4566788888899999999999999999999996532 3578899999
Q ss_pred HHHHHhhhcCCCCCCcceeccceeeeeeeeeecCeEEEEeecccCCcCCC----CceEEEe-e----------cCCccEE
Q psy1545 337 GTYAAKCMVGAVKNEPVIQDFSFEMFTHMTKFFGYKVILLGLFNGQTLEN----DYEILLR-V----------TRGEEYI 401 (454)
Q Consensus 337 g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~----~~~~~~~-~----------~~~~~~~ 401 (454)
|+.||.||++.......+...|..+| ++++++.+|+++.++... .+++... . ....+|+
T Consensus 449 g~~aa~~i~~~~~~~~~~~~~p~~~~------~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (598)
T 2x8g_A 449 GRYLARRLFAGATELTDYSNVATTVF------TPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYM 522 (598)
T ss_dssp HHHHHHHHHHCCCCCCCCTTCCEEEC------SSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEE
T ss_pred HHHHHHHHhcCCCcccCCCCCcEEEE------CCCceEEEeCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEE
Confidence 99999999975322222223344444 455899999998765321 2332210 0 1246899
Q ss_pred EEEEE---CCeEEEEEEEcCC--chHHHHHHHHhcCCCcchhhhhccCCCCCCCC
Q psy1545 402 KLVMK---DGRMQGAVLIGET--EIEEMCENLILNQLDLTDIADDLLNPNIDIDD 451 (454)
Q Consensus 402 k~~~~---~~~i~G~~~~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
|++++ +++|+|+|++|+. +.++.++.+|++++|++++.+. .++++++.+
T Consensus 523 kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~-~~~hPt~~e 576 (598)
T 2x8g_A 523 KLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRT-IGIHPTCSE 576 (598)
T ss_dssp EEEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHS-CCCSSCSGG
T ss_pred EEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhc-cccCCCHHH
Confidence 99994 7999999999996 3678999999999999999764 555555554
No 50
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=5e-45 Score=369.34 Aligned_cols=383 Identities=20% Similarity=0.271 Sum_probs=279.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccccccc--------------------------cc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLS--------------------------DI 55 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~--------------------------~~ 55 (454)
++||||||||+||++||..|++.+++.+|+|||+++.+++ +++.+++.+. ..
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y--~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY--MRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCB--CSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCG
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCC--CCCCCCHHhhcCCccchhhcccccccccccccccccch
Confidence 4799999999999999999998878899999999986542 2222111110 00
Q ss_pred chhh--hHHHHHhc-CcEEEcc-eEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC--------Cceeeeeccc
Q psy1545 56 TVEE--TDANKFEG-LCTVIVD-TVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS--------PHVITIRDTD 123 (454)
Q Consensus 56 ~~~~--~~~~~~~~-~i~~~~~-~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~--------~~~~~~~~~~ 123 (454)
.... .....+.+ +++++.+ +|+.+++..++|.+.+|+++.||+||||||++|+.|+++ +.++.+++.+
T Consensus 89 ~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~ 168 (493)
T 1m6i_A 89 SFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIG 168 (493)
T ss_dssp GGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHH
T ss_pred HhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCCcccccccccCceEEEcCHH
Confidence 0000 00001123 7898876 999999988999998898999999999999999877653 2455667788
Q ss_pred hHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc------CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhh
Q psy1545 124 SVAVLQEKLKSAKKIVVIGNGGIATELVHELS------NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIF 197 (454)
Q Consensus 124 ~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~------g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~ 197 (454)
++..+.+.+..+++++|||+|++|+|+|..|. |.+|+++++.+.++.+.+++++.+.+.+.+.+
T Consensus 169 d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~---------- 238 (493)
T 1m6i_A 169 DFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRR---------- 238 (493)
T ss_dssp HHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHT----------
T ss_pred HHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHh----------
Confidence 88888877777999999999999999999874 68899999888777666676666666666644
Q ss_pred hhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCc
Q psy1545 198 KRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNS 277 (454)
Q Consensus 198 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~ 277 (454)
.||++++++.|++++.+++ .+.+.+++|+++++|.||+|+|++|+.
T Consensus 239 -------------------------------~GV~v~~~~~V~~i~~~~~---~~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 239 -------------------------------EGVKVMPNAIVQSVGVSSG---KLLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp -------------------------------TTCEEECSCCEEEEEEETT---EEEEEETTSCEEEESEEEECCCEEECC
T ss_pred -------------------------------cCCEEEeCCEEEEEEecCC---eEEEEECCCCEEECCEEEECCCCCccH
Confidence 8999999999999986542 457888999999999999999999999
Q ss_pred ccccCCCCceecC-CCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcceec
Q psy1545 278 NIQVHGTPFELAP-DCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPVIQD 356 (454)
Q Consensus 278 ~~~~~~~~l~~~~-~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~ 356 (454)
+ +++..++++++ +|+|.||++||| .|+|||+|||+..+....+.. ...+|..|..||+.||+||++... .+..
T Consensus 285 ~-l~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~a~~~~~~~g~~-~~~~~~~A~~qg~~aa~ni~g~~~---~~~~ 358 (493)
T 1m6i_A 285 E-LAKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDAACFYDIKLGRR-RVEHHDHAVVSGRLAGENMTGAAK---PYWH 358 (493)
T ss_dssp T-THHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGGEEEEETTTEEE-CCCCHHHHHHHHHHHHHHHTSCCC---CCCC
T ss_pred H-HHHHcCCccccCCCcEEECCCccc-CCCeeEeeeeEeccCcccCcc-ccchHHHHHHHHHHHHHHhcCCCC---CcCC
Confidence 8 88777888875 589999999998 699999999998643322221 345788999999999999997532 1111
Q ss_pred cceeeeeeeeeec-----------CeEEEEeecccCCcCC------------------------CCceEEEe--------
Q psy1545 357 FSFEMFTHMTKFF-----------GYKVILLGLFNGQTLE------------------------NDYEILLR-------- 393 (454)
Q Consensus 357 ~~~~~~~~~~~~~-----------~~~~~~vG~~~~~~~~------------------------~~~~~~~~-------- 393 (454)
.|+ .|+.++ +..+.++|........ ..+++...
T Consensus 359 ~~~----~~s~~~~~~~~~~~g~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (493)
T 1m6i_A 359 QSM----FWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAP 434 (493)
T ss_dssp CCE----EEEESSTTCEEEEEECCCTTSCEEEEEECCCTTCSHHHHHHHHSCSCHHHHSCSCCCC---------------
T ss_pred cCc----eeeeeccCcceEEEeccCCCcceEEeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 222 223232 3333344442211000 00011000
Q ss_pred --ecCCccEEEEEEECCeEEEEEEEcCCchHHHHHHHHhcCCCcchhhh
Q psy1545 394 --VTRGEEYIKLVMKDGRMQGAVLIGETEIEEMCENLILNQLDLTDIAD 440 (454)
Q Consensus 394 --~~~~~~~~k~~~~~~~i~G~~~~g~~~~~~~~~~~i~~~~~~~~~~~ 440 (454)
......|+.+++++|+|+|+.++|.......++.+|+++.+++++.+
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~~~~~~~~ 483 (493)
T 1m6i_A 435 VQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHEDLNE 483 (493)
T ss_dssp -----CCEEEEEEEETTEEEEEEEESCCSCHHHHHHHHHHCCBCSCSTT
T ss_pred cccccCCcEEEEEEeCCEEEEEEEecCcchHHHHHHHHhCCCCCCCHHH
Confidence 00123457788899999999999999999999999999999988754
No 51
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=1.1e-40 Score=337.06 Aligned_cols=290 Identities=19% Similarity=0.222 Sum_probs=226.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc-cccccchhhhHHHHHh--c-CcEEEcceEEE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK-LLSDITVEETDANKFE--G-LCTVIVDTVAA 78 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~-~i~~~~~~v~~ 78 (454)
.+|||||||+||+++|..|++. +.+|+|||+++++.+.+..+.... .+...++......... . +++++.++|+.
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~--~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~v~~ 120 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTK--KYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATS 120 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTT--TCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEEEEE
T ss_pred CCEEEECCcHHHHHHHHHhhhC--CCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEEEEE
Confidence 5799999999999999999987 889999999988654333322211 1221222111222222 2 89999999999
Q ss_pred EeCcccEEEec--------------------cCcEEEecEEEEecCCCCCCCCCC---CceeeeeccchHHHHHHHhh--
Q psy1545 79 IDPRVNCVITE--------------------KQNRIKYKTLCICTGASPRKIWYS---PHVITIRDTDSVAVLQEKLK-- 133 (454)
Q Consensus 79 i~~~~~~v~~~--------------------~g~~i~~d~lviAtG~~p~~~~~~---~~~~~~~~~~~~~~l~~~~~-- 133 (454)
||++.++|+++ ++.++.||+||||||++|+.+++| ++.+.+.+.+++.++++.+.
T Consensus 121 ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~ 200 (502)
T 4g6h_A 121 INPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAAN 200 (502)
T ss_dssp EEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHH
T ss_pred EEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHHH
Confidence 99999988763 356899999999999999999888 56778888888887765431
Q ss_pred ---------------cCCeEEEEcCchhHHHHHHHhc----------------CCcEEEEEeCCCccccccCCcchhhhH
Q psy1545 134 ---------------SAKKIVVIGNGGIATELVHELS----------------NVDIVWVVKDKHISATFLDPGAAEFFQ 182 (454)
Q Consensus 134 ---------------~~~~vvVvG~G~~g~e~a~~l~----------------g~~V~~i~~~~~~~~~~~d~~~~~~~~ 182 (454)
...+++|||||++|+|+|.++. ..+|+++++.+++++. +++++.+.+.
T Consensus 201 ~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~-~~~~~~~~~~ 279 (502)
T 4g6h_A 201 LEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM-FEKKLSSYAQ 279 (502)
T ss_dssp HHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT-SCHHHHHHHH
T ss_pred HHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC-CCHHHHHHHH
Confidence 1247999999999999998774 2689999999999985 7888888888
Q ss_pred HHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCC---
Q psy1545 183 DSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNG--- 259 (454)
Q Consensus 183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g--- 259 (454)
+.|++ +||++++++.|++++.++ ........+|
T Consensus 280 ~~L~~-----------------------------------------~GV~v~~~~~v~~v~~~~---~~~~~~~~dg~~~ 315 (502)
T 4g6h_A 280 SHLEN-----------------------------------------TSIKVHLRTAVAKVEEKQ---LLAKTKHEDGKIT 315 (502)
T ss_dssp HHHHH-----------------------------------------TTCEEETTEEEEEECSSE---EEEEEECTTSCEE
T ss_pred HHHHh-----------------------------------------cceeeecCceEEEEeCCc---eEEEEEecCcccc
Confidence 88866 899999999999998754 2334455666
Q ss_pred -cEEecCEEEEeeccCcCcc--cccCCCCceecCCCceEecccccc-ccCceeecCcccccCCccccchhhccChHHHHH
Q psy1545 260 -HTHACDIVVSAIGVVPNSN--IQVHGTPFELAPDCGIGVNELMQT-SISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKH 335 (454)
Q Consensus 260 -~~~~~D~vi~a~G~~p~~~--~~~~~~~l~~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~ 335 (454)
+++++|.||||+|.+|+.. .+....+...+.+|+|.||++||+ ++|||||+|||+..+ .+++++.|.+
T Consensus 316 ~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~--------~p~~a~~A~q 387 (502)
T 4g6h_A 316 EETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAG--------LPPTAQVAHQ 387 (502)
T ss_dssp EEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESS--------SCCCHHHHHH
T ss_pred eeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCC--------CCCchHHHHH
Confidence 4699999999999999842 133334555677899999999997 899999999999865 3568899999
Q ss_pred HHHHHHhhhcCC
Q psy1545 336 MGTYAAKCMVGA 347 (454)
Q Consensus 336 ~g~~aa~~i~~~ 347 (454)
||+++|+||.+.
T Consensus 388 qg~~~A~ni~~~ 399 (502)
T 4g6h_A 388 EAEYLAKNFDKM 399 (502)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999754
No 52
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.2e-39 Score=305.31 Aligned_cols=288 Identities=20% Similarity=0.196 Sum_probs=200.0
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccccc-----ccccchhhhHHHHHhc-CcEEEcc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKL-----LSDITVEETDANKFEG-LCTVIVD 74 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~i~~~~~ 74 (454)
|+|||+||||||||++||.+|+++ |++|+|||++...+.+.+..+.... ....++.......+.+ ...+...
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~--g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA--NLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYG 82 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccce
Confidence 368999999999999999999998 8999999998776666554332211 1112233333344444 5555433
Q ss_pred -eEEEEeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC-CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHH
Q psy1545 75 -TVAAIDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS-PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVH 152 (454)
Q Consensus 75 -~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~ 152 (454)
.+...+.....+...+++++.||+||||||++|+.|++| ...+................++|+++|||||++|+|+|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~ 162 (312)
T 4gcm_A 83 DIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGT 162 (312)
T ss_dssp CCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHH
T ss_pred eeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHHH
Confidence 445555555555566788999999999999999999888 111111111111112222235899999999999999999
Q ss_pred Hhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCc
Q psy1545 153 ELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTK 230 (454)
Q Consensus 153 ~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~g 230 (454)
.|+ |.+||+++|++++++.. ....+.+ ++.+
T Consensus 163 ~l~~~g~~Vtlv~~~~~~~~~~------~~~~~~~-----------------------------------------~~~~ 195 (312)
T 4gcm_A 163 FLTKFADKVTIVHRRDELRAQR------ILQDRAF-----------------------------------------KNDK 195 (312)
T ss_dssp HHTTTCSEEEEECSSSSCCSCH------HHHHHHH-----------------------------------------HCTT
T ss_pred HHHhcCCEEEEEecccccCcch------hHHHHHH-----------------------------------------HhcC
Confidence 997 99999999998876531 1111222 2256
Q ss_pred eEEEeCceEEEEEcCCCCccceEEE-ec--CCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCce
Q psy1545 231 ITIEYSCEVERIVDSEDDTCNAYVK-LT--NGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNV 307 (454)
Q Consensus 231 v~i~~~~~v~~i~~~~~~~~~~~v~-~~--~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~I 307 (454)
+.......+......+......... .. ++..+++|.|++++|.+|+.. ++...++. +++|+|.||++||||+|||
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~-~~~~~g~~-~~~G~I~vd~~~~Ts~pgI 273 (312)
T 4gcm_A 196 IDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTA-PFKDLGIT-NDVGYIVTKDDMTTSVPGI 273 (312)
T ss_dssp EEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCG-GGGGGTCB-CTTSCBCCCTTSBCSSTTE
T ss_pred cceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCch-hHHhccee-cCCCeEeeCCCCccCCCCE
Confidence 7777666665555433101111111 12 236799999999999999998 77777765 5689999999999999999
Q ss_pred eecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCC
Q psy1545 308 YAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAV 348 (454)
Q Consensus 308 ya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (454)
||+|||++.+ +++++.|..||+.||.||...+
T Consensus 274 yA~GDv~~~~---------~~~~~~A~~~G~~AA~~i~~~L 305 (312)
T 4gcm_A 274 FAAGDVRDKG---------LRQIVTATGDGSIAAQSAAEYI 305 (312)
T ss_dssp EECSTTBSCS---------CCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCc---------chHHHHHHHHHHHHHHHHHHHH
Confidence 9999998743 3678899999999999997543
No 53
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=6e-38 Score=299.78 Aligned_cols=282 Identities=20% Similarity=0.182 Sum_probs=199.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccc-----------ccccccccccchhhhHHHHHhc-CcE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKT-----------VPVTKLLSDITVEETDANKFEG-LCT 70 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~-~i~ 70 (454)
|||+||||||||++||..|+++ |++|+|||++...+.+.+. +.++......++.......+.+ ++.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~--g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~ 82 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRS--SLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTT 82 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcE
Confidence 8999999999999999999998 8999999998765443321 1111111112233333334444 888
Q ss_pred EEcceEEEEeCccc--EEEeccCcEEEecEEEEecCCCCCCCCCCC----ceeeeeccchHHHHHHHhhcCCeEEEEcCc
Q psy1545 71 VIVDTVAAIDPRVN--CVITEKQNRIKYKTLCICTGASPRKIWYSP----HVITIRDTDSVAVLQEKLKSAKKIVVIGNG 144 (454)
Q Consensus 71 ~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lviAtG~~p~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G 144 (454)
+....+........ .+.+.++.++.||+||||||++|+.|++|. ............. .....++++++|||+|
T Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~-~~~~~~~~~vvViGgG 161 (314)
T 4a5l_A 83 IITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDG-AVPIFRNKVLMVVGGG 161 (314)
T ss_dssp EECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHT-TSGGGTTSEEEEECSS
T ss_pred EEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhhh-hhhhcCCCeEEEECCC
Confidence 87777777665443 556667789999999999999999999881 1122222222221 1122358999999999
Q ss_pred hhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcccccccc
Q psy1545 145 GIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNL 222 (454)
Q Consensus 145 ~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 222 (454)
++|+|+|..|+ |++||+++|.+..... .....+..
T Consensus 162 ~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~------~~~~~~~~------------------------------------- 198 (314)
T 4a5l_A 162 DAAMEEALHLTKYGSKVIILHRRDAFRAS------KTMQERVL------------------------------------- 198 (314)
T ss_dssp HHHHHHHHHHTTTSSEEEEECSSSSCCSC------HHHHHHHH-------------------------------------
T ss_pred hHHHHHHHHHHHhCCeeeeeccccccccc------chhhhhhh-------------------------------------
Confidence 99999999997 9999999987654321 11111222
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCCccceEEEe---cCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccc
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL---TNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNEL 299 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~---~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~ 299 (454)
...+++.+....+.++...+.....+.+.. .+++++++|.|++|+|++||++ +++.. +.++++|.+ ||++
T Consensus 199 ----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~-~l~~~-~~~~~~G~i-v~~~ 271 (314)
T 4a5l_A 199 ----NHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSK-FLGGQ-VKTADDGYI-LTEG 271 (314)
T ss_dssp ----TCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCG-GGTTS-SCBCTTSCB-CCBT
T ss_pred ----cccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccccChh-Hhccc-ceEcCCeeE-eCCC
Confidence 226788888888888876542111223322 2347899999999999999998 77654 666777755 8999
Q ss_pred cccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcC
Q psy1545 300 MQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVG 346 (454)
Q Consensus 300 ~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 346 (454)
+|||+|||||+|||++.+ .+++..|+.||+.||.++..
T Consensus 272 ~~Ts~pgIyA~GDv~~~~---------~~~~~~A~~~G~~AA~~~~~ 309 (314)
T 4a5l_A 272 PKTSVDGVFACGDVCDRV---------YRQAIVAAGSGCMAALSCEK 309 (314)
T ss_dssp TBCSSTTEEECSTTTCSS---------CCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEEeccCCc---------chHHHHHHHHHHHHHHHHHH
Confidence 999999999999999864 35677899999999998864
No 54
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=3e-38 Score=314.70 Aligned_cols=304 Identities=18% Similarity=0.161 Sum_probs=218.2
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccccc-ccccchhhhHHHHHhc-CcEEEcceEEE
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKL-LSDITVEETDANKFEG-LCTVIVDTVAA 78 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~i~~~~~~v~~ 78 (454)
|..+|||||||+||++||..|++++++.+|+|||+++++.+...++.+... ....++.....+.+.+ +++++.++|+.
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~ 80 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAES 80 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEE
Confidence 877899999999999999999998778999999999987654433332211 1111222222233444 99999999999
Q ss_pred EeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC---CceeeeeccchHHHHHHHhh---cCCeEEEEcCch------h
Q psy1545 79 IDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS---PHVITIRDTDSVAVLQEKLK---SAKKIVVIGNGG------I 146 (454)
Q Consensus 79 i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~---~~~~~~~~~~~~~~l~~~~~---~~~~vvVvG~G~------~ 146 (454)
+|+++++|++++|+++.||+||||||+++. ++++ ++.+.+++.+++.++++.+. ..+.++|+|++. .
T Consensus 81 Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~ 159 (430)
T 3hyw_A 81 IDPDANTVTTQSGKKIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGP 159 (430)
T ss_dssp EETTTTEEEETTCCEEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHH
T ss_pred EECCCCEEEECCCCEEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHH
Confidence 999999999999999999999999999864 3455 56777888888888777653 345566666553 2
Q ss_pred HHHHHHHh----c------CCcEEEEEeCCCccc--cccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCC
Q psy1545 147 ATELVHEL----S------NVDIVWVVKDKHISA--TFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGP 214 (454)
Q Consensus 147 g~e~a~~l----~------g~~V~~i~~~~~~~~--~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 214 (454)
+.|++..+ . ..+|++++..+.+.. ....+...+.+.+.+.+
T Consensus 160 ~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~--------------------------- 212 (430)
T 3hyw_A 160 AYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAE--------------------------- 212 (430)
T ss_dssp HHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHH---------------------------
T ss_pred HHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHh---------------------------
Confidence 34554433 1 357888887665432 11233344445555543
Q ss_pred ccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCC--cEEecCEEEEeeccCcCcccccCCCC--ceecC
Q psy1545 215 DWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNG--HTHACDIVVSAIGVVPNSNIQVHGTP--FELAP 290 (454)
Q Consensus 215 ~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~D~vi~a~G~~p~~~~~~~~~~--l~~~~ 290 (454)
+||++++++.|++++.+. +.+...+| +++++|.+++++|.+|+. ++...+ +..+.
T Consensus 213 --------------~GV~~~~~~~v~~v~~~~-----~~~~~~~g~~~~i~~d~vi~~~G~~~~~--~~~~~~~~l~~~~ 271 (430)
T 3hyw_A 213 --------------RNIDWIANVAVKAIEPDK-----VIYEDLNGNTHEVPAKFTMFMPSFQGPE--VVASAGDKVANPA 271 (430)
T ss_dssp --------------TTCEEECSCEEEEECSSE-----EEEECTTSCEEEEECSEEEEECEEECCH--HHHTTCTTTBCTT
T ss_pred --------------CCeEEEeCceEEEEeCCc-----eEEEeeCCCceEeecceEEEeccCCCch--HHHhcccccccCC
Confidence 899999999999997653 34444444 579999999999999985 555544 44455
Q ss_pred CCceEeccccc-cccCceeecCcccccCCcc-ccc-hhhccChHHHHHHHHHHHhhhcCCCCCCcc
Q psy1545 291 DCGIGVNELMQ-TSISNVYAAGDVCTPSWDL-AKQ-WFQMRLWTQAKHMGTYAAKCMVGAVKNEPV 353 (454)
Q Consensus 291 ~g~i~vd~~~~-t~~~~Iya~GD~~~~~~~~-~~~-~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~ 353 (454)
+|+|.||++|| |++|||||+|||+..+... .+. ...+++++.|.+||+++|+||++.+.|++.
T Consensus 272 ~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~ 337 (430)
T 3hyw_A 272 NKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPD 337 (430)
T ss_dssp TCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 67899999999 9999999999999865221 111 113567899999999999999998887654
No 55
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=9.2e-38 Score=300.10 Aligned_cols=284 Identities=23% Similarity=0.249 Sum_probs=209.3
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccc------ccccccccccchhhhHHHHHhc-CcEEEcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKT------VPVTKLLSDITVEETDANKFEG-LCTVIVD 74 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~ 74 (454)
++||+|||||++|+++|..|++. +.+|+|||++...+.+... +.++.......+.....+.+.+ +++++.+
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~ 85 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA--QLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEMD 85 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHc--CCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEee
Confidence 47999999999999999999998 8999999998543322211 1111111111222233333444 8998888
Q ss_pred eEEEEeCc--c---cEEEeccCcEEEecEEEEecCCCCCCCCCC-Cce---eeeeccchHHHHHHHhhcCCeEEEEcCch
Q psy1545 75 TVAAIDPR--V---NCVITEKQNRIKYKTLCICTGASPRKIWYS-PHV---ITIRDTDSVAVLQEKLKSAKKIVVIGNGG 145 (454)
Q Consensus 75 ~v~~i~~~--~---~~v~~~~g~~i~~d~lviAtG~~p~~~~~~-~~~---~~~~~~~~~~~l~~~~~~~~~vvVvG~G~ 145 (454)
++..++.. . ..|.+.+|+.+.||+||+|||++|+.|+++ ... ..++.... .......+++++|||+|.
T Consensus 86 ~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~---~~~~~~~~~~v~VvG~G~ 162 (325)
T 2q7v_A 86 EVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCAT---CDGFFYKGKKVVVIGGGD 162 (325)
T ss_dssp CEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH---HHGGGGTTCEEEEECCSH
T ss_pred eEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEecc---CCHHHcCCCEEEEECCCH
Confidence 99988865 3 366677788999999999999998888776 111 11112111 122233589999999999
Q ss_pred hHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccc
Q psy1545 146 IATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLH 223 (454)
Q Consensus 146 ~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 223 (454)
+|+|+|..|. +.+|+++++++.+.. + ..+.+.+.
T Consensus 163 ~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~----~~~~~~l~------------------------------------- 198 (325)
T 2q7v_A 163 AAVEEGMFLTKFADEVTVIHRRDTLRA---N----KVAQARAF------------------------------------- 198 (325)
T ss_dssp HHHHHHHHHTTTCSEEEEECSSSSCCS---C----HHHHHHHH-------------------------------------
T ss_pred HHHHHHHHHHhcCCEEEEEeCCCcCCc---c----hHHHHHHH-------------------------------------
Confidence 9999999997 899999999876532 1 22222221
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEec---CCc--EEecCEEEEeeccCcCcccccCCCCceecCCCceEecc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT---NGH--THACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNE 298 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~---~g~--~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~ 298 (454)
++.||+++++++++++..++ ....+.++ +|+ ++++|.|++|+|++|+.+ +++.. +.++++|+|.||+
T Consensus 199 ---~~~gv~i~~~~~v~~i~~~~---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~-~l~~~-~~~~~~g~i~vd~ 270 (325)
T 2q7v_A 199 ---ANPKMKFIWDTAVEEIQGAD---SVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTA-FVKDT-VSLRDDGYVDVRD 270 (325)
T ss_dssp ---TCTTEEEECSEEEEEEEESS---SEEEEEEEETTTCCEEEEECSEEEECSCEEESCG-GGTTT-SCBCTTSCBCCBT
T ss_pred ---hcCCceEecCCceEEEccCC---cEEEEEEEECCCCcEEEEEcCEEEEccCCCCChH-HHhhh-cccCCCccEecCC
Confidence 23699999999999998753 23356664 564 799999999999999998 88776 7778889999999
Q ss_pred ccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCC
Q psy1545 299 LMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNE 351 (454)
Q Consensus 299 ~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 351 (454)
++||+.|+|||+|||+..+ +++++.|..||+.||.||.+.+.++
T Consensus 271 ~~~t~~~~vya~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~l~~~ 314 (325)
T 2q7v_A 271 EIYTNIPMLFAAGDVSDYI---------YRQLATSVGAGTRAAMMTERQLAAL 314 (325)
T ss_dssp TTBCSSTTEEECSTTTCSS---------CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCCCEEEeecccCcc---------HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998753 3678899999999999999866543
No 56
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=4e-38 Score=299.75 Aligned_cols=283 Identities=14% Similarity=0.115 Sum_probs=202.3
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccc-ccccccc--cccccchhhhHHHHHhc--CcEEEcce
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVT-KTVPVTK--LLSDITVEETDANKFEG--LCTVIVDT 75 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~--~i~~~~~~ 75 (454)
-+|||+||||||||++||..|++. +++|+|||++...+... +++.+.. .....++.....+++.+ .+.++...
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~--g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRA--RKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKT 82 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeE
Confidence 058999999999999999999998 89999999987654322 2222211 11222333333444444 66777777
Q ss_pred EEEEeCc---ccEEEeccCcEEEecEEEEecCCCCCCCCCCC-ceeeeeccchHHHHHHHhhcCCeEEEEcCchh-HHHH
Q psy1545 76 VAAIDPR---VNCVITEKQNRIKYKTLCICTGASPRKIWYSP-HVITIRDTDSVAVLQEKLKSAKKIVVIGNGGI-ATEL 150 (454)
Q Consensus 76 v~~i~~~---~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~-g~e~ 150 (454)
+..+... ...+.+.+++++.||+||||||++|+.|+++. ..+................++++++|||||.. ++|+
T Consensus 83 ~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~ 162 (304)
T 4fk1_A 83 VVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHM 162 (304)
T ss_dssp EEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHH
T ss_pred EEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhH
Confidence 7666433 34677888899999999999999999999881 11111111111222222224678888888765 6788
Q ss_pred HHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccC
Q psy1545 151 VHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRD 228 (454)
Q Consensus 151 a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 228 (454)
|..+. +.+|+++.+++.+. ..+.+.+. +
T Consensus 163 a~~~~~~~~~v~i~~~~~~~~---------~~~~~~l~-----------------------------------------~ 192 (304)
T 4fk1_A 163 TKLVYNWSTDLVIATNGNELS---------QTIMDELS-----------------------------------------N 192 (304)
T ss_dssp HHHHTTTCSCEEEECSSCCCC---------HHHHHHHH-----------------------------------------T
T ss_pred HHHHHhCCceEEEEeccccch---------hhhhhhhh-----------------------------------------c
Confidence 88776 88999987765432 33444443 3
Q ss_pred CceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCcee
Q psy1545 229 TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNVY 308 (454)
Q Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~Iy 308 (454)
.|+.++.+ .+..+..++ +....+++++|+++++|.+++++|.+|+.. ++...|++++++|+|.||+++|||+||||
T Consensus 193 ~g~~~~~~-~v~~~~~~~--~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~-~~~~~g~~~~~~G~I~vd~~~~Ts~p~Iy 268 (304)
T 4fk1_A 193 KNIPVITE-SIRTLQGEG--GYLKKVEFHSGLRIERAGGFIVPTFFRPNQ-FIEQLGCELQSNGTFVIDDFGRTSEKNIY 268 (304)
T ss_dssp TTCCEECS-CEEEEESGG--GCCCEEEETTSCEECCCEEEECCEEECSSC-HHHHTTCCCCTTSSSCSSTTCBCSSTTEE
T ss_pred cceeEeee-eEEEeecCC--CeeeeeeccccceeeecceeeeeccccCCh-hhhhcCeEECCCCCEEECcCCccCCCCEE
Confidence 78998887 477777654 335678899999999999888887777766 78888999999999999999999999999
Q ss_pred ecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCC
Q psy1545 309 AAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAV 348 (454)
Q Consensus 309 a~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (454)
|+|||++.+ ++++..|+.||+.||.+|...+
T Consensus 269 A~GDv~~~~---------~~~~~~A~~~G~~AA~~i~~~L 299 (304)
T 4fk1_A 269 LAGETTTQG---------PSSLIIAASQGNKAAIAINSDI 299 (304)
T ss_dssp ECSHHHHTS---------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCc---------chHHHHHHHHHHHHHHHHHHHH
Confidence 999999754 3567789999999999886543
No 57
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.1e-37 Score=298.77 Aligned_cols=283 Identities=19% Similarity=0.176 Sum_probs=209.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccc---ccc--cccccchhhhHHHHHhc-CcEEEcce
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVP---VTK--LLSDITVEETDANKFEG-LCTVIVDT 75 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~-~i~~~~~~ 75 (454)
++||+|||||++|+++|..|++. +.+|+|+|+....+.+..... ++. .....++.....+.+.+ +++++.++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 93 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS--GFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGVE 93 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETCC
T ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEee
Confidence 47999999999999999999998 899999999654333222111 111 11111222333344455 89988889
Q ss_pred EEEEeCccc--EEEeccCcEEEecEEEEecCCCCCCCCCC-Cce---eeeeccchHHHHHHHhhcCCeEEEEcCchhHHH
Q psy1545 76 VAAIDPRVN--CVITEKQNRIKYKTLCICTGASPRKIWYS-PHV---ITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATE 149 (454)
Q Consensus 76 v~~i~~~~~--~v~~~~g~~i~~d~lviAtG~~p~~~~~~-~~~---~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e 149 (454)
+..++.... .|.+ ++..+.||+||+|||++|+.|+++ ... ..+..... .......+++++|||+|.+|+|
T Consensus 94 v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~---~~~~~~~~~~v~viG~G~~g~e 169 (319)
T 3cty_A 94 VRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCST---CDGYLFKGKRVVTIGGGNSGAI 169 (319)
T ss_dssp EEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHH---HHGGGGBTSEEEEECCSHHHHH
T ss_pred EEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEe---cchhhcCCCeEEEECCCHHHHH
Confidence 998886554 4555 567899999999999998888776 111 11111111 1222345899999999999999
Q ss_pred HHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCcc
Q psy1545 150 LVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSR 227 (454)
Q Consensus 150 ~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 227 (454)
+|..|. +.+|+++++.+.+.. ...+.+.+.+
T Consensus 170 ~a~~l~~~g~~V~~i~~~~~~~~-------~~~l~~~l~~---------------------------------------- 202 (319)
T 3cty_A 170 AAISMSEYVKNVTIIEYMPKYMC-------ENAYVQEIKK---------------------------------------- 202 (319)
T ss_dssp HHHHHTTTBSEEEEECSSSSCCS-------CHHHHHHHHH----------------------------------------
T ss_pred HHHHHHhhCCcEEEEEcCCccCC-------CHHHHHHHhc----------------------------------------
Confidence 999997 899999998876532 1223333323
Q ss_pred CCceEEEeCceEEEEEcCCCCccceEEEec---CCc--EEecCEEEEeeccCcCcccccCCCCceecCCCceEecccccc
Q psy1545 228 DTKITIEYSCEVERIVDSEDDTCNAYVKLT---NGH--THACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQT 302 (454)
Q Consensus 228 ~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~---~g~--~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t 302 (454)
.||++++++.++++..++ +....+.+. +|+ ++++|.|++|+|++|+.+ +++..+++++++|+|.||+++||
T Consensus 203 -~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~-~l~~~gl~~~~~g~i~vd~~~~t 278 (319)
T 3cty_A 203 -RNIPYIMNAQVTEIVGDG--KKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTS-FLKDSGVKLDERGYIVVDSRQRT 278 (319)
T ss_dssp -TTCCEECSEEEEEEEESS--SSEEEEEEEETTTCCEEEECCSEEEECCCEEECCG-GGTTSCCCBCTTSCBCCCTTCBC
T ss_pred -CCcEEEcCCeEEEEecCC--ceEEEEEEEEcCCCceEEEecCEEEEeeCCccChH-HHhhccccccCCccEeCCCCCcc
Confidence 899999999999998764 223345554 564 699999999999999998 88888888888899999999999
Q ss_pred ccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCC
Q psy1545 303 SISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKN 350 (454)
Q Consensus 303 ~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 350 (454)
+.|+|||+|||+..+ +++++.|..||+.||.||...+.+
T Consensus 279 ~~~~vya~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 279 SVPGVYAAGDVTSGN---------FAQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp SSTTEEECSTTBTTC---------CCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEeecccCcc---------hhhHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999753 357889999999999999876543
No 58
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=1.1e-37 Score=297.70 Aligned_cols=282 Identities=17% Similarity=0.163 Sum_probs=208.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCCcccccccc------ccccccccccchhhhHHHHHhc-CcEEEcc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSGIVKAVTKT------VPVTKLLSDITVEETDANKFEG-LCTVIVD 74 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~ 74 (454)
+||+|||||++|+++|..|++. +. +|+|||++...+.+... +.++.......+.....+.+.+ +++++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~--g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 79 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG--GVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMT 79 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEECS
T ss_pred ceEEEECccHHHHHHHHHHHHC--CCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEEE
Confidence 7999999999999999999998 88 99999997544333221 1111111112222333344445 8998888
Q ss_pred eEEEEeCccc--EEEeccCcEEEecEEEEecCCCCCCCCCCCc-e---eeeeccchHHHHHHHhhcCCeEEEEcCchhHH
Q psy1545 75 TVAAIDPRVN--CVITEKQNRIKYKTLCICTGASPRKIWYSPH-V---ITIRDTDSVAVLQEKLKSAKKIVVIGNGGIAT 148 (454)
Q Consensus 75 ~v~~i~~~~~--~v~~~~g~~i~~d~lviAtG~~p~~~~~~~~-~---~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~ 148 (454)
++..++.+.. .+.+.+++.+.||+||+|||++|+.|+++.. . ..++.... .......+++++|||+|.+|+
T Consensus 80 ~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~v~VvG~G~~g~ 156 (311)
T 2q0l_A 80 AVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCAT---CDGFFYKNKEVAVLGGGDTAV 156 (311)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHH---HHGGGGTTSEEEEECCSHHHH
T ss_pred EEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeec---CChhhcCCCEEEEECCCHHHH
Confidence 9998886655 5666778899999999999999888877611 0 11112111 122234589999999999999
Q ss_pred HHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCc
Q psy1545 149 ELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSS 226 (454)
Q Consensus 149 e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l 226 (454)
|+|..|. +.+|+++++++++.. ++ .+.+.+.
T Consensus 157 e~A~~l~~~g~~Vtlv~~~~~~~~---~~----~~~~~l~---------------------------------------- 189 (311)
T 2q0l_A 157 EEAIYLANICKKVYLIHRRDGFRC---AP----ITLEHAK---------------------------------------- 189 (311)
T ss_dssp HHHHHHHTTSSEEEEECSSSSCCS---CH----HHHHHHH----------------------------------------
T ss_pred HHHHHHHhcCCEEEEEeeCCccCC---CH----HHHHHHh----------------------------------------
Confidence 9999986 899999999876531 21 2222221
Q ss_pred cCCceEEEeCceEEEEEcCCCCccceEEEec---CCc--EEecCEEEEeeccCcCcccccCCCC----ceecCCCceEec
Q psy1545 227 RDTKITIEYSCEVERIVDSEDDTCNAYVKLT---NGH--THACDIVVSAIGVVPNSNIQVHGTP----FELAPDCGIGVN 297 (454)
Q Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~---~g~--~~~~D~vi~a~G~~p~~~~~~~~~~----l~~~~~g~i~vd 297 (454)
++.||++++++.+.++..+++ ....+.++ +|+ ++++|.|++|+|++|+.+ +++..+ +.++++|+|.||
T Consensus 190 ~~~gv~v~~~~~v~~i~~~~~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~-~l~~~g~~~~l~~~~~g~i~vd 266 (311)
T 2q0l_A 190 NNDKIEFLTPYVVEEIKGDAS--GVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNA-VLKQEDNSMLCKCDEYGSIVVD 266 (311)
T ss_dssp TCTTEEEETTEEEEEEEEETT--EEEEEEEEETTTCCEEEEECSEEEECSCEEECCG-GGBCTTSCBSSCBCTTSCBCCC
T ss_pred hCCCeEEEeCCEEEEEECCCC--cEeEEEEEecCCCceEEEecCEEEEEecCccChh-hhhcccccceeEeccCCCEEeC
Confidence 237999999999999987532 22345555 564 799999999999999998 888774 888888999999
Q ss_pred cccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCC
Q psy1545 298 ELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAV 348 (454)
Q Consensus 298 ~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (454)
+++||+.|+|||+|||+..+ +++++.|..||+.||.||...+
T Consensus 267 ~~~~t~~~~vya~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~l 308 (311)
T 2q0l_A 267 FSMKTNVQGLFAAGDIRIFA---------PKQVVCAASDGATAALSVISYL 308 (311)
T ss_dssp TTCBCSSTTEEECSTTBTTC---------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCCCeEEcccccCcc---------hHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999853 3678899999999999997643
No 59
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=8.1e-38 Score=301.85 Aligned_cols=288 Identities=20% Similarity=0.183 Sum_probs=212.6
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC----ccccccccc-------cccccccccchhhhHHHHHhc-C
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG----IVKAVTKTV-------PVTKLLSDITVEETDANKFEG-L 68 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~----~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~ 68 (454)
|++||+|||||++|+++|..|++. +++|+|||+.+ ..++.+... .++......++.......+.+ +
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 98 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARA--EIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFG 98 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999998 89999999954 333333221 111111122233333344444 9
Q ss_pred cEEEcceEEEEeCcccEEEe-----ccCcEEEecEEEEecCCCCCCCCCCC-ceeeeeccchHHHHHHH--hhcCCeEEE
Q psy1545 69 CTVIVDTVAAIDPRVNCVIT-----EKQNRIKYKTLCICTGASPRKIWYSP-HVITIRDTDSVAVLQEK--LKSAKKIVV 140 (454)
Q Consensus 69 i~~~~~~v~~i~~~~~~v~~-----~~g~~i~~d~lviAtG~~p~~~~~~~-~~~~~~~~~~~~~l~~~--~~~~~~vvV 140 (454)
++++.+++..++.+...+.+ .++..+.||+||+|||++|+.|+++. ..+.............. ...+++++|
T Consensus 99 v~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 178 (338)
T 3itj_A 99 TEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAV 178 (338)
T ss_dssp CEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEE
T ss_pred CEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEE
Confidence 99988889999987765544 35678999999999999998888772 11100111111222222 235899999
Q ss_pred EcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcccc
Q psy1545 141 IGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHT 218 (454)
Q Consensus 141 vG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 218 (454)
||+|.+|+|+|..|. +.+|+++++.+.+.+ ...+.+.+.+
T Consensus 179 vG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------~~~~~~~l~~------------------------------- 220 (338)
T 3itj_A 179 IGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------STIMQKRAEK------------------------------- 220 (338)
T ss_dssp ECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHHHHHHHHH-------------------------------
T ss_pred ECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------CHHHHHHHHh-------------------------------
Confidence 999999999999997 899999999887654 2333344422
Q ss_pred ccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecC-----CcEEecCEEEEeeccCcCcccccCCCCceecCCCc
Q psy1545 219 QVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTN-----GHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCG 293 (454)
Q Consensus 219 ~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~-----g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~ 293 (454)
..||++++++.+.+++.+++ ....+.+++ ++++++|.||+|+|++|+.. ++.. ++.++++|+
T Consensus 221 ---------~~gv~i~~~~~v~~i~~~~~--~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~-~~~~-~l~~~~~G~ 287 (338)
T 3itj_A 221 ---------NEKIEILYNTVALEAKGDGK--LLNALRIKNTKKNEETDLPVSGLFYAIGHTPATK-IVAG-QVDTDEAGY 287 (338)
T ss_dssp ---------CTTEEEECSEEEEEEEESSS--SEEEEEEEETTTTEEEEEECSEEEECSCEEECCG-GGBT-TBCBCTTSC
T ss_pred ---------cCCeEEeecceeEEEEcccC--cEEEEEEEECCCCceEEEEeCEEEEEeCCCCChh-HhhC-ceEecCCCc
Confidence 25999999999999987652 244466665 46799999999999999998 7776 888888999
Q ss_pred eEe-ccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCC
Q psy1545 294 IGV-NELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKN 350 (454)
Q Consensus 294 i~v-d~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 350 (454)
+.+ |++++|+.|+|||+|||+..+ ++.+..|+.||+.||.||...+.+
T Consensus 288 i~v~~~~~~t~~~~vya~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 288 IKTVPGSSLTSVPGFFAAGDVQDSK---------YRQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp BCCCTTSSBCSSTTEEECGGGGCSS---------CCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEcCcccccCCCCEEEeeccCCCC---------ccceeeehhhhHHHHHHHHHHHhc
Confidence 995 788999999999999999743 357788999999999999876544
No 60
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1e-37 Score=299.01 Aligned_cols=285 Identities=20% Similarity=0.226 Sum_probs=212.3
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccc------cccchhhhHHHHHhc-CcEEEc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLL------SDITVEETDANKFEG-LCTVIV 73 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~i~~~~ 73 (454)
|++||+|||||++|+++|..|++. +.+|+|||++ .++.+.+....... ...++.....+.+.+ +++++.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 89 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARY--MLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL 89 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE
T ss_pred CccCEEEECccHHHHHHHHHHHHC--CCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE
Confidence 357999999999999999999998 8999999998 33333321111111 112222333344445 888877
Q ss_pred ceEEEEeCccc--EEEeccCcEEEecEEEEecCCCCCCCCCC-Cce---eeeeccchHHHHHHHhhcCCeEEEEcCchhH
Q psy1545 74 DTVAAIDPRVN--CVITEKQNRIKYKTLCICTGASPRKIWYS-PHV---ITIRDTDSVAVLQEKLKSAKKIVVIGNGGIA 147 (454)
Q Consensus 74 ~~v~~i~~~~~--~v~~~~g~~i~~d~lviAtG~~p~~~~~~-~~~---~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g 147 (454)
.+|..++.+.. .+.++++..+.||+||+|||+.|+.|+++ ... ..+... .........+++++|+|+|.+|
T Consensus 90 ~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~---~~~~~~~~~~~~v~vvG~G~~~ 166 (323)
T 3f8d_A 90 DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYC---SVADAPLFKNRVVAVIGGGDSA 166 (323)
T ss_dssp SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESC---HHHHGGGGTTCEEEEECCSHHH
T ss_pred EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEe---ccCCHhHcCCCEEEEECCCHHH
Confidence 89999987643 56777778999999999999998888776 111 111111 1111123358999999999999
Q ss_pred HHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccC
Q psy1545 148 TELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGS 225 (454)
Q Consensus 148 ~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 225 (454)
+|+|..+. +.+|+++++++++.+ + ..+.+.+.
T Consensus 167 ~e~a~~l~~~g~~v~~~~~~~~~~~---~----~~~~~~~~--------------------------------------- 200 (323)
T 3f8d_A 167 LEGAEILSSYSTKVYLIHRRDTFKA---Q----PIYVETVK--------------------------------------- 200 (323)
T ss_dssp HHHHHHHHHHSSEEEEECSSSSCCS---C----HHHHHHHH---------------------------------------
T ss_pred HHHHHHHHHhCCeEEEEEeCCCCCc---C----HHHHHHHH---------------------------------------
Confidence 99999987 999999999887654 1 12222221
Q ss_pred ccCCceEEEeCceEEEEEcCCCCccceEEEecC---Cc--EEecCEEEEeeccCcCcccccCCCCceecCCCceEecccc
Q psy1545 226 SRDTKITIEYSCEVERIVDSEDDTCNAYVKLTN---GH--THACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELM 300 (454)
Q Consensus 226 l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~---g~--~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~ 300 (454)
++.||++++++.+.++..++. ...+.+.+ |+ ++++|.|++|+|++|+.+ +++..+++++++|+|.||+++
T Consensus 201 -~~~gv~~~~~~~v~~i~~~~~---~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~-~~~~~g~~~~~~g~i~vd~~~ 275 (323)
T 3f8d_A 201 -KKPNVEFVLNSVVKEIKGDKV---VKQVVVENLKTGEIKELNVNGVFIEIGFDPPTD-FAKSNGIETDTNGYIKVDEWM 275 (323)
T ss_dssp -TCTTEEEECSEEEEEEEESSS---EEEEEEEETTTCCEEEEECSEEEECCCEECCHH-HHHHTTCCBCTTSSBCCCTTC
T ss_pred -hCCCcEEEeCCEEEEEeccCc---eeEEEEEECCCCceEEEEcCEEEEEECCCCChh-HHhhcCeeecCCCcEecCCCc
Confidence 236999999999999987642 44566765 65 799999999999999988 888888998889999999999
Q ss_pred ccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCC
Q psy1545 301 QTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKN 350 (454)
Q Consensus 301 ~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 350 (454)
||+.|||||+|||+..+ ..++++..|..||+.||.||+..+.+
T Consensus 276 ~t~~~~vya~GD~~~~~-------~~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (323)
T 3f8d_A 276 RTSVPGVFAAGDCTSAW-------LGFRQVITAVAQGAVAATSAYRYVTE 318 (323)
T ss_dssp BCSSTTEEECSTTBSTT-------TTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCEEEcceecCCC-------CcccceeehhhHHHHHHHHHHHHHHH
Confidence 99999999999999853 11467889999999999999876543
No 61
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=9.9e-38 Score=295.66 Aligned_cols=277 Identities=16% Similarity=0.111 Sum_probs=209.0
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccc-cccc--cccccchhhhHHHHHhc--CcEEEcce
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTV-PVTK--LLSDITVEETDANKFEG--LCTVIVDT 75 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~--~i~~~~~~ 75 (454)
|++||+|||||++|+++|..|++. +.+|+|+|+++..+...... .+.. .....++.....+.+.+ +++++.++
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 78 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRA--RKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGR 78 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeE
Confidence 889999999999999999999998 89999999986544322111 1111 11112233333444444 78888889
Q ss_pred EEEEeCcc--cEEEeccCcEEEecEEEEecCCCCCCCCCC-Cce---eeeeccchHHHHHHHhhcCCeEEEEcCchhHHH
Q psy1545 76 VAAIDPRV--NCVITEKQNRIKYKTLCICTGASPRKIWYS-PHV---ITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATE 149 (454)
Q Consensus 76 v~~i~~~~--~~v~~~~g~~i~~d~lviAtG~~p~~~~~~-~~~---~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e 149 (454)
|+.++++. ..|.+.+++++.||+||+|||++|+.|+++ ... ..+.... ........+++++|+|+|.+|+|
T Consensus 79 v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~v~vvG~G~~~~e 155 (297)
T 3fbs_A 79 VTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCP---YCHGYELDQGKIGVIAASPMAIH 155 (297)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCH---HHHTGGGTTCEEEEECCSTTHHH
T ss_pred EEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcc---cCcchhhcCCEEEEEecCccHHH
Confidence 99998764 367777888999999999999998888776 111 1111111 11111224899999999999999
Q ss_pred HHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCcc
Q psy1545 150 LVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSR 227 (454)
Q Consensus 150 ~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 227 (454)
+|..|. + +|+++.+++. .+...+.+.+.+
T Consensus 156 ~a~~l~~~g-~v~~v~~~~~--------~~~~~~~~~l~~---------------------------------------- 186 (297)
T 3fbs_A 156 HALMLPDWG-ETTFFTNGIV--------EPDADQHALLAA---------------------------------------- 186 (297)
T ss_dssp HHHHGGGTS-EEEEECTTTC--------CCCHHHHHHHHH----------------------------------------
T ss_pred HHHHhhhcC-cEEEEECCCC--------CCCHHHHHHHHH----------------------------------------
Confidence 999997 7 9999987654 223344455543
Q ss_pred CCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceec--CCC-ceEecccccccc
Q psy1545 228 DTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELA--PDC-GIGVNELMQTSI 304 (454)
Q Consensus 228 ~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~--~~g-~i~vd~~~~t~~ 304 (454)
.||+++. +.++++..++ .+.+++|+++++|.|++|+|++|+.+ +++..+++++ ++| ++.||++++|+.
T Consensus 187 -~gv~i~~-~~v~~i~~~~------~v~~~~g~~~~~D~vi~a~G~~p~~~-~~~~~g~~~~~~~~G~~i~vd~~~~t~~ 257 (297)
T 3fbs_A 187 -RGVRVET-TRIREIAGHA------DVVLADGRSIALAGLFTQPKLRITVD-WIEKLGCAVEEGPMGSTIVTDPMKQTTA 257 (297)
T ss_dssp -TTCEEEC-SCEEEEETTE------EEEETTSCEEEESEEEECCEEECCCS-CHHHHTCCEEEETTEEEECCCTTCBCSS
T ss_pred -CCcEEEc-ceeeeeecCC------eEEeCCCCEEEEEEEEEccCcccCch-hHHhcCCccccCCCCceEEeCCCCccCC
Confidence 8999996 8999998642 58889999999999999999999998 8887777776 457 899999999999
Q ss_pred CceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCC
Q psy1545 305 SNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKN 350 (454)
Q Consensus 305 ~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 350 (454)
|+|||+|||+..+ ++++.|..||+.||.||...+.+
T Consensus 258 ~~vya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 258 RGIFACGDVARPA----------GSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp TTEEECSGGGCTT----------CCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeecCCch----------HHHHHHHHhHHHHHHHHHHHHhh
Confidence 9999999999843 67889999999999999876543
No 62
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=4.2e-38 Score=311.35 Aligned_cols=298 Identities=14% Similarity=0.169 Sum_probs=218.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcceEEEEeC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVDTVAAIDP 81 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~v~~i~~ 81 (454)
++|||||||+||++||..|++.+++.+|+|||+++.+.++.....+.......+......+.+.+ +++++.++|+.+|+
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~~v~~id~ 82 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHDSALGIDP 82 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECSCEEEEET
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEeEEEEEEc
Confidence 57999999999999999999987788999999998765554433322222222222222344444 99999999999999
Q ss_pred cccEEEeccCcEEEecEEEEecCCCCCCCCCC--------CceeeeeccchHHHHHHHhhc--CCeEEEEcCch------
Q psy1545 82 RVNCVITEKQNRIKYKTLCICTGASPRKIWYS--------PHVITIRDTDSVAVLQEKLKS--AKKIVVIGNGG------ 145 (454)
Q Consensus 82 ~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~--------~~~~~~~~~~~~~~l~~~~~~--~~~vvVvG~G~------ 145 (454)
+.+.+.+.+|.++.||+||||||++++.++++ ..++.+.+.+++..+++.+.. ..+.+|+++|.
T Consensus 83 ~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~ 162 (401)
T 3vrd_B 83 DKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCP 162 (401)
T ss_dssp TTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCT
T ss_pred cCcEEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEee
Confidence 99999999999999999999999998877766 233456677777777776542 23344443332
Q ss_pred -----hHHHHHHHhc----CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcc
Q psy1545 146 -----IATELVHELS----NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDW 216 (454)
Q Consensus 146 -----~g~e~a~~l~----g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 216 (454)
.+++++..+. +.+|+++++.+.+... ..+.+.+.+
T Consensus 163 ~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~-------~~~~~~~~~----------------------------- 206 (401)
T 3vrd_B 163 PGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQ-------AQFTKGWER----------------------------- 206 (401)
T ss_dssp THHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTH-------HHHHHHHHH-----------------------------
T ss_pred hHHHHHHHHHHHHHHhcCCCCEEEEEccccccccc-------ccccHHHHH-----------------------------
Confidence 3345555543 5789999887765321 111111111
Q ss_pred ccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEe
Q psy1545 217 HTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGV 296 (454)
Q Consensus 217 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~v 296 (454)
.+...+++.||++++++.+..++.+.+ ...+++++|+++++|.+++++|.+|+. ++...++. +++|+|.|
T Consensus 207 ----~~~~~l~~~gi~v~~~~~v~~v~~~~~---~~~v~~~~g~~i~~D~vi~~~g~~~~~--~~~~~gl~-~~~G~i~V 276 (401)
T 3vrd_B 207 ----LYGFGTENALIEWHPGPDAAVVKTDTE---AMTVETSFGETFKAAVINLIPPQRAGK--IAQSASLT-NDSGWCPV 276 (401)
T ss_dssp ----HSCTTSTTCSEEEECTTTTCEEEEETT---TTEEEETTSCEEECSEEEECCCEEECH--HHHHTTCC-CTTSSBCB
T ss_pred ----HHHHHHHhcCcEEEeCceEEEEEeccc---ceEEEcCCCcEEEeeEEEEecCcCCch--hHhhcccc-ccCCCEEE
Confidence 012344668999999999988886653 467889999999999999999999985 77777874 77899999
Q ss_pred ccc-cc-cccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCcc
Q psy1545 297 NEL-MQ-TSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEPV 353 (454)
Q Consensus 297 d~~-~~-t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~ 353 (454)
|++ || |++|||||+|||+... + .+++++.|.+||+++|+||++.+.|+++
T Consensus 277 D~~tl~~t~~p~VfAiGDva~~~-~------~pk~a~~A~~qa~v~A~ni~~~l~G~~~ 328 (401)
T 3vrd_B 277 DIRTFESSLQPGIHVIGDACNAA-P------MPKSAYSANSQAKVAAAAVVALLKGEEP 328 (401)
T ss_dssp CTTTCBBSSSTTEEECGGGBCCT-T------SCBSHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCcceecCCCCEEEecccccCC-C------CCchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 987 66 8999999999998642 1 2468899999999999999988877643
No 63
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=2.3e-37 Score=296.51 Aligned_cols=286 Identities=21% Similarity=0.185 Sum_probs=209.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccc------cccccccccccchhhhHHHHHhc-CcEEEcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTK------TVPVTKLLSDITVEETDANKFEG-LCTVIVD 74 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~ 74 (454)
++||+|||||++|+++|..|++. +.+|+|+|+....+.+.. ++.++..+....+.......+.+ +++++.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARA--NLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFD 82 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT--TCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 57999999999999999999998 899999998644332211 11111111111222222333444 8999888
Q ss_pred eEEEEeCcccEEE-eccCcEEEecEEEEecCCCCCCCCCC-Cce---eeeeccchHHHHHHHhhcCCeEEEEcCchhHHH
Q psy1545 75 TVAAIDPRVNCVI-TEKQNRIKYKTLCICTGASPRKIWYS-PHV---ITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATE 149 (454)
Q Consensus 75 ~v~~i~~~~~~v~-~~~g~~i~~d~lviAtG~~p~~~~~~-~~~---~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e 149 (454)
++..++.....+. +.++..+.||+||+|||++|..|+++ ... ..+++. ......+..+++++|||+|.+|+|
T Consensus 83 ~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~v~ViG~G~~g~e 159 (320)
T 1trb_A 83 HINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSAC---ATSDGFFYRNQKVAVIGGGNTAVE 159 (320)
T ss_dssp CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESC---HHHHGGGGTTSEEEEECSSHHHHH
T ss_pred eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEec---ccCCccccCCCeEEEECCCHHHHH
Confidence 8999987655443 55678899999999999998888776 111 111121 122222345899999999999999
Q ss_pred HHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCcc
Q psy1545 150 LVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSR 227 (454)
Q Consensus 150 ~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 227 (454)
+|..|. +.+|+++++.+.+.. ++.+.+.+.+.+ +
T Consensus 160 ~A~~l~~~g~~Vtlv~~~~~~~~---~~~~~~~l~~~l-----------------------------------------~ 195 (320)
T 1trb_A 160 EALYLSNIASEVHLIHRRDGFRA---EKILIKRLMDKV-----------------------------------------E 195 (320)
T ss_dssp HHHHHTTTSSEEEEECSSSSCCC---CHHHHHHHHHHH-----------------------------------------H
T ss_pred HHHHHHhcCCeEEEEEeCCcccc---CHHHHHHHHHhc-----------------------------------------c
Confidence 999997 899999999877642 333333333333 3
Q ss_pred CCceEEEeCceEEEEEcCCCCccceEEEecC----C--cEEecCEEEEeeccCcCcccccCCCCceecCCCceEecccc-
Q psy1545 228 DTKITIEYSCEVERIVDSEDDTCNAYVKLTN----G--HTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELM- 300 (454)
Q Consensus 228 ~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~----g--~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~- 300 (454)
+.||++++++.+.++..+++ ....+.+++ | +++++|.|++|+|++|+.+ ++. .++.++ +|+|.||+++
T Consensus 196 ~~gv~i~~~~~v~~i~~~~~--~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~-~~~-~~l~~~-~G~i~vd~~~~ 270 (320)
T 1trb_A 196 NGNIILHTNRTLEEVTGDQM--GVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTA-IFE-GQLELE-NGYIKVQSGIH 270 (320)
T ss_dssp TSSEEEECSCEEEEEEECSS--SEEEEEEECCTTCCCCEEEECSEEEECSCEEESCG-GGT-TTSCEE-TTEECCCCSSS
T ss_pred cCCeEEEcCceeEEEEcCCC--ceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChH-Hhc-cccccc-CceEEECCCcc
Confidence 48999999999999987652 233466654 4 5799999999999999998 776 467888 9999999997
Q ss_pred ----ccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCC
Q psy1545 301 ----QTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKN 350 (454)
Q Consensus 301 ----~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 350 (454)
+|+.|+|||+|||+..+ ++.+..|..||+.||.+|...+.+
T Consensus 271 ~~~~~t~~~~vya~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 271 GNATQTSIPGVFAAGDVMDHI---------YRQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp SCTTBCSSTTEEECGGGGCSS---------SCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccccCCCCCEEEcccccCCc---------chhhhhhhccHHHHHHHHHHHHHh
Confidence 79999999999999853 356788999999999999876654
No 64
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=7.3e-37 Score=292.18 Aligned_cols=284 Identities=19% Similarity=0.192 Sum_probs=204.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEE-ECCCCcccccccccc-------ccccccccchhhhHHHHHhc-CcEEE
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGL-VTPSGIVKAVTKTVP-------VTKLLSDITVEETDANKFEG-LCTVI 72 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~l-ie~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~i~~~ 72 (454)
++||+|||||+||++||..|++. +.+|+| +|+... ++.+.... +.......++.......+.+ +++++
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~li~e~~~~-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 80 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG--GLKNVVMFEKGMP-GGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHE 80 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH--TCSCEEEECSSST-TGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCCCC-CceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEE
Confidence 47999999999999999999998 899999 999544 33222211 11111112233333344445 89998
Q ss_pred cceEEEEeCcc--cEEE--eccCcEEEecEEEEecCCCCCCCCCC-CceeeeeccchHHHHHHHhhcCCeEEEEcCchhH
Q psy1545 73 VDTVAAIDPRV--NCVI--TEKQNRIKYKTLCICTGASPRKIWYS-PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIA 147 (454)
Q Consensus 73 ~~~v~~i~~~~--~~v~--~~~g~~i~~d~lviAtG~~p~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g 147 (454)
.+++..+ .+. ..+. +..+..+.||+||+|||++|+.|+++ ...+.................+++++|+|+|.+|
T Consensus 81 ~~~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~ 159 (315)
T 3r9u_A 81 MVGVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTA 159 (315)
T ss_dssp CCCEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHH
T ss_pred EEEEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHH
Confidence 8899888 433 2222 33222899999999999998888776 1111101111112222233458999999999999
Q ss_pred HHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccC
Q psy1545 148 TELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGS 225 (454)
Q Consensus 148 ~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 225 (454)
+|+|..+. +.+|+++++++++.. ++ ..+.+.+
T Consensus 160 ~e~a~~l~~~g~~v~~~~~~~~~~~---~~---~~~~~~~---------------------------------------- 193 (315)
T 3r9u_A 160 LEEALYLANICSKIYLIHRRDEFRA---AP---STVEKVK---------------------------------------- 193 (315)
T ss_dssp HHHHHHHHTTSSEEEEECSSSSCBS---CH---HHHHHHH----------------------------------------
T ss_pred HHHHHHHHhhCCEEEEEEeCCCCCC---CH---HHHHHHH----------------------------------------
Confidence 99999986 899999999887632 21 2222222
Q ss_pred ccCCceEEEeCceEEEEEcCCCCccceEEEec--CCc--EEecCEEEEeeccCcCcccccCC---CC-ceecCCCceEec
Q psy1545 226 SRDTKITIEYSCEVERIVDSEDDTCNAYVKLT--NGH--THACDIVVSAIGVVPNSNIQVHG---TP-FELAPDCGIGVN 297 (454)
Q Consensus 226 l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~--~g~--~~~~D~vi~a~G~~p~~~~~~~~---~~-l~~~~~g~i~vd 297 (454)
++.||++++++.+.++..+++ ....+.+. +|+ ++++|.|++|+|++|+.. ++.. .| ++++++|+|.||
T Consensus 194 -~~~gv~~~~~~~v~~i~~~~~--~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~-~~~~~~~~g~l~~~~~g~i~vd 269 (315)
T 3r9u_A 194 -KNEKIELITSASVDEVYGDKM--GVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNE-ILKQDDSKFLCNMEEGGQVSVD 269 (315)
T ss_dssp -HCTTEEEECSCEEEEEEEETT--EEEEEEEECTTSCEEEECCSCEEECSCEEECCG-GGBCTTSCBSSCBCTTSCBCCC
T ss_pred -hcCCeEEEeCcEEEEEEcCCC--cEEEEEEEcCCCCeEEeecCeEEEEEcCCCCch-hhhcccccceeeecCCCcEEeC
Confidence 238999999999999987652 23345554 775 799999999999999998 7666 54 888888999999
Q ss_pred cccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCC
Q psy1545 298 ELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAV 348 (454)
Q Consensus 298 ~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (454)
+++||+.|+|||+|||+..+ ++.+..|+.||+.||.||...+
T Consensus 270 ~~~~t~~~~v~a~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~l 311 (315)
T 3r9u_A 270 LKMQTSVAGLFAAGDLRKDA---------PKQVICAAGDGAVAALSAMAYI 311 (315)
T ss_dssp TTCBCSSTTEEECGGGBTTC---------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCCEEEeecccCCc---------hhhhhhHHhhHHHHHHHHHHHH
Confidence 99999999999999998643 4678899999999999998654
No 65
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=9.7e-37 Score=304.62 Aligned_cols=304 Identities=14% Similarity=0.100 Sum_probs=223.3
Q ss_pred ccEEEECCCHHHHHHHHHHhh-cCCCCeEEEECCCCcccccccccccccc-ccccchhhhHHHHHhc-CcEEEcceEEEE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAF-LHPGESIGLVTPSGIVKAVTKTVPVTKL-LSDITVEETDANKFEG-LCTVIVDTVAAI 79 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~-~~~g~~v~lie~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~i~~~~~~v~~i 79 (454)
+||||||||++|+++|..|++ ..++.+|+|||+++.+.+....+.+... ....++.....+.+.+ +++++.++|+.+
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i 84 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQI 84 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEEEE
Confidence 689999999999999999999 2238999999999876543333222111 1111222333455555 999999999999
Q ss_pred eCcccEEEeccCcEEEecEEEEecCCCCCCCCCC--C----ceeeeeccchHHHHHHHhh---cCCeEEEEcCchhH---
Q psy1545 80 DPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS--P----HVITIRDTDSVAVLQEKLK---SAKKIVVIGNGGIA--- 147 (454)
Q Consensus 80 ~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~--~----~~~~~~~~~~~~~l~~~~~---~~~~vvVvG~G~~g--- 147 (454)
+++.+.|.+++++++.||+||+|||++|+.++++ . +.+.+++.+++.++.+.+. ++++++|||+|..+
T Consensus 85 d~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~ 164 (437)
T 3sx6_A 85 DAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCF 164 (437)
T ss_dssp ETTTTEEEETTSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCC
T ss_pred EcCCCEEEECCCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcC
Confidence 9999999998888999999999999999888776 1 4456677788877766443 25667899986654
Q ss_pred ---HHHHHHh----c--CCc-----EEEEEeCCCcccccc--CCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCC
Q psy1545 148 ---TELVHEL----S--NVD-----IVWVVKDKHISATFL--DPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPS 211 (454)
Q Consensus 148 ---~e~a~~l----~--g~~-----V~~i~~~~~~~~~~~--d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (454)
+|+|..+ . |.+ |+++++.+.+....+ .++....+.+.+.+
T Consensus 165 G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~------------------------ 220 (437)
T 3sx6_A 165 GPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKE------------------------ 220 (437)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHH------------------------
T ss_pred cHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHH------------------------
Confidence 8888544 2 553 999999887643211 13455555555544
Q ss_pred CCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEe--cC-----CcEEecCEEEEeeccCcCcccccCCC
Q psy1545 212 LGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL--TN-----GHTHACDIVVSAIGVVPNSNIQVHGT 284 (454)
Q Consensus 212 l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~--~~-----g~~~~~D~vi~a~G~~p~~~~~~~~~ 284 (454)
.||++++++.+++++.++ +.+.. .+ ++++++|.+++++|++|+.. +....
T Consensus 221 -----------------~gI~~~~~~~v~~v~~~~-----v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~-~~~~~ 277 (437)
T 3sx6_A 221 -----------------EGIEAYTNCKVTKVEDNK-----MYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPA-VAGVE 277 (437)
T ss_dssp -----------------TTCEEECSEEEEEEETTE-----EEEEEECTTSCEEEEEEEECSEEEEECCEECCHH-HHTST
T ss_pred -----------------CCCEEEcCCEEEEEECCe-----EEEEecccCCccccceEEEEeEEEEcCCCcCchh-hhccc
Confidence 899999999999998753 22222 23 56799999999999998865 55456
Q ss_pred CceecCCCceEecccccc-ccCceeecCcccccCCcc-ccch-hhccChHHHHHHHHHHHhhhcCCCCCCcce
Q psy1545 285 PFELAPDCGIGVNELMQT-SISNVYAAGDVCTPSWDL-AKQW-FQMRLWTQAKHMGTYAAKCMVGAVKNEPVI 354 (454)
Q Consensus 285 ~l~~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~~-~~~~-~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~ 354 (454)
++ .+++|+|.||+++|| ++|||||+|||+..+... .+.+ ..+++++.|..||+++|+||...+.|++..
T Consensus 278 gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~ 349 (437)
T 3sx6_A 278 GL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGE 349 (437)
T ss_dssp TT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCC
T ss_pred cc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 67 578899999999998 999999999999864211 0000 124678999999999999999988876543
No 66
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.9e-36 Score=292.16 Aligned_cols=287 Identities=17% Similarity=0.180 Sum_probs=210.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccc------ccc---cccchhhhHHHHHhc-CcEE
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVT------KLL---SDITVEETDANKFEG-LCTV 71 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~-~i~~ 71 (454)
++||+|||||++|+++|..|++. +.+|+|||+++.+++.+...... ..+ ...++.....+.+.+ ++++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 82 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR--GLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY 82 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 47999999999999999999997 89999999988765433211000 001 111222223333444 7887
Q ss_pred E-cceEEEEeCcc--cEEEeccCcEEEecEEEEecCC---CCCCCCCC-Cceee---e-eccchHHHHHHHhhcCCeEEE
Q psy1545 72 I-VDTVAAIDPRV--NCVITEKQNRIKYKTLCICTGA---SPRKIWYS-PHVIT---I-RDTDSVAVLQEKLKSAKKIVV 140 (454)
Q Consensus 72 ~-~~~v~~i~~~~--~~v~~~~g~~i~~d~lviAtG~---~p~~~~~~-~~~~~---~-~~~~~~~~l~~~~~~~~~vvV 140 (454)
+ ..+|..++.+. ..|.+.++..+.||+||+|||+ .|..|+++ ...+. + ....+...+ .+++++|
T Consensus 83 ~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~~~~-----~~~~v~v 157 (335)
T 2zbw_A 83 SLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSKAEF-----QGKRVLI 157 (335)
T ss_dssp EESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCGGGG-----TTCEEEE
T ss_pred EeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCchhhc-----CCCEEEE
Confidence 5 45888887654 3566667778999999999999 46666665 11110 1 112222211 3899999
Q ss_pred EcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcccc
Q psy1545 141 IGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHT 218 (454)
Q Consensus 141 vG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 218 (454)
||+|.+|+|+|..|. +.+|++++|++++.+ .++..+.+.+.+
T Consensus 158 iG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---~~~~~~~l~~~l--------------------------------- 201 (335)
T 2zbw_A 158 VGGGDSAVDWALNLLDTARRITLIHRRPQFRA---HEASVKELMKAH--------------------------------- 201 (335)
T ss_dssp ECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---CHHHHHHHHHHH---------------------------------
T ss_pred ECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---cHHHHHHHHhcc---------------------------------
Confidence 999999999999997 889999999887654 223333343333
Q ss_pred ccccccCccCCceEEEeCceEEEEEcCCCCccceEEEec---CC--cEEecCEEEEeeccCcCcccccCCCCceecCCCc
Q psy1545 219 QVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT---NG--HTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCG 293 (454)
Q Consensus 219 ~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~---~g--~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~ 293 (454)
++.||++++++.+.+++.++ ....+.++ +| +++++|.|++|+|++|+.+ +++..+++++ +|+
T Consensus 202 --------~~~gv~v~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~-~l~~~~~~~~-~g~ 268 (335)
T 2zbw_A 202 --------EEGRLEVLTPYELRRVEGDE---RVRWAVVFHNQTQEELALEVDAVLILAGYITKLG-PLANWGLALE-KNK 268 (335)
T ss_dssp --------HTTSSEEETTEEEEEEEESS---SEEEEEEEETTTCCEEEEECSEEEECCCEEEECG-GGGGSCCCEE-TTE
T ss_pred --------ccCCeEEecCCcceeEccCC---CeeEEEEEECCCCceEEEecCEEEEeecCCCCch-Hhhhcceecc-CCe
Confidence 34799999999999998753 23356665 67 6799999999999999998 8888888876 789
Q ss_pred eEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCC
Q psy1545 294 IGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNE 351 (454)
Q Consensus 294 i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 351 (454)
|.||+++||+.|+|||+|||+..+. .+++++.|..||+.||+||.+.+.+.
T Consensus 269 i~vd~~~~t~~~~vya~GD~~~~~~-------~~~~~~~A~~~g~~aa~~i~~~l~~~ 319 (335)
T 2zbw_A 269 IKVDTTMATSIPGVYACGDIVTYPG-------KLPLIVLGFGEAAIAANHAAAYANPA 319 (335)
T ss_dssp EECCTTCBCSSTTEEECSTTEECTT-------CCCCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred eeeCCCCCCCCCCEEEeccccccCc-------chhhhhhhHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999997531 13678899999999999999876554
No 67
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=3.9e-36 Score=286.77 Aligned_cols=285 Identities=19% Similarity=0.231 Sum_probs=205.7
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccc-----cccchhhhHHHHHhc-CcEEEcc-
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLL-----SDITVEETDANKFEG-LCTVIVD- 74 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~i~~~~~- 74 (454)
++||+|||||++|+++|..|++. +.+|+|||+.. .+.+.......... ....+.....+.+.+ +++++.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~--g~~v~li~~~~-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 77 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK--GIRTGLMGERF-GGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQ 77 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT--TCCEEEECSST-TGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC-CceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccC
Confidence 47999999999999999999998 89999998642 22222111111100 011222223334445 8999887
Q ss_pred eEEEEeCc-----ccEEEeccCcEEEecEEEEecCCCCCCCCCC-CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHH
Q psy1545 75 TVAAIDPR-----VNCVITEKQNRIKYKTLCICTGASPRKIWYS-PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIAT 148 (454)
Q Consensus 75 ~v~~i~~~-----~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~ 148 (454)
+|+.++++ ...|.+++|+.+.||+||+|||++|..|+++ ...+.......+..+......+++++|||+|.+|+
T Consensus 78 ~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~ 157 (310)
T 1fl2_A 78 SASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGV 157 (310)
T ss_dssp CEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHH
T ss_pred EEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHH
Confidence 99999764 3467777788999999999999998877776 11110001111222223344689999999999999
Q ss_pred HHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCc
Q psy1545 149 ELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSS 226 (454)
Q Consensus 149 e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l 226 (454)
|+|..|. +.+|+++++.+++. .+ ..+.+.+.
T Consensus 158 e~A~~l~~~g~~Vtlv~~~~~~~---~~----~~~~~~l~---------------------------------------- 190 (310)
T 1fl2_A 158 EAAIDLAGIVEHVTLLEFAPEMK---AD----QVLQDKLR---------------------------------------- 190 (310)
T ss_dssp HHHHHHHTTBSEEEEECSSSSCC---SC----HHHHHHHH----------------------------------------
T ss_pred HHHHHHHHhCCEEEEEEeCcccC---cc----HHHHHHHh----------------------------------------
Confidence 9999986 89999999987652 12 22333332
Q ss_pred cCCceEEEeCceEEEEEcCCCCccceEEEecC---C--cEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccc
Q psy1545 227 RDTKITIEYSCEVERIVDSEDDTCNAYVKLTN---G--HTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQ 301 (454)
Q Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~---g--~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~ 301 (454)
+..||++++++.++++..+++ ....+++.+ | .++++|.|++|+|++|+.+ ++... +.++++|+|.||+++|
T Consensus 191 ~~~gv~v~~~~~v~~i~~~~~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~-~l~~~-l~~~~~g~i~vd~~~~ 266 (310)
T 1fl2_A 191 SLKNVDIILNAQTTEVKGDGS--KVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTN-WLEGA-VERNRMGEIIIDAKCE 266 (310)
T ss_dssp TCTTEEEESSEEEEEEEESSS--SEEEEEEEETTTCCEEEEECSEEEECSCEEESCG-GGTTT-SCBCTTSCBCCCTTCB
T ss_pred hCCCeEEecCCceEEEEcCCC--cEEEEEEEECCCCcEEEEEcCEEEEeeCCccCch-HHhcc-ccccCCCcEEcCCCCc
Confidence 126999999999999987542 233456643 5 3789999999999999998 77654 7778889999999999
Q ss_pred cccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCC
Q psy1545 302 TSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVK 349 (454)
Q Consensus 302 t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 349 (454)
|+.|+|||+|||+..+ .+.+..|+.||+.||.||...+.
T Consensus 267 t~~~~vya~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~l~ 305 (310)
T 1fl2_A 267 TNVKGVFAAGDCTTVP---------YKQIIIATGEGAKASLSAFDYLI 305 (310)
T ss_dssp CSSTTEEECSTTBSCS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeecccCCc---------chhhhhhHhhHHHHHHHHHHHHH
Confidence 9999999999999854 24678899999999999987553
No 68
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=1.5e-36 Score=302.71 Aligned_cols=303 Identities=18% Similarity=0.151 Sum_probs=220.7
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccc-cccchhhhHHHHHhc-CcEEEcceEEE
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLL-SDITVEETDANKFEG-LCTVIVDTVAA 78 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~i~~~~~~v~~ 78 (454)
|++||||||||+||+++|..|++++++.+|+|||+++.+.+....+...... ...++.....+.+.+ +++++.++++.
T Consensus 1 M~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~ 80 (430)
T 3h28_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAES 80 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEE
T ss_pred CCCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEEEEE
Confidence 7789999999999999999999965589999999998876543332221111 111121222233444 99999899999
Q ss_pred EeCcccEEEeccCcEEEecEEEEecCCCCCCCCCC--CceeeeeccchHHHHHHHhh---cCCeEEEEcCchhH------
Q psy1545 79 IDPRVNCVITEKQNRIKYKTLCICTGASPRKIWYS--PHVITIRDTDSVAVLQEKLK---SAKKIVVIGNGGIA------ 147 (454)
Q Consensus 79 i~~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~--~~~~~~~~~~~~~~l~~~~~---~~~~vvVvG~G~~g------ 147 (454)
++++.+.|.+++++++.||+||+|||++|..|... +....+.+.+++.++.+.+. ++++++|||+|..+
T Consensus 81 id~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~ 160 (430)
T 3h28_A 81 IDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPA 160 (430)
T ss_dssp EETTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHH
T ss_pred EECCCCEEEECCCcEEECCEEEEcCCcccccCCCCCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHH
Confidence 99999999998888999999999999998776543 23445667777777665433 25567889998654
Q ss_pred HHHHHHhc------C----CcEEEEEeCCCcccccc--CCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCc
Q psy1545 148 TELVHELS------N----VDIVWVVKDKHISATFL--DPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPD 215 (454)
Q Consensus 148 ~e~a~~l~------g----~~V~~i~~~~~~~~~~~--d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 215 (454)
+|+|..+. | .+|+++++.+.+....+ .++....+.+.+.+
T Consensus 161 ~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~---------------------------- 212 (430)
T 3h28_A 161 YEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAE---------------------------- 212 (430)
T ss_dssp HHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHH----------------------------
T ss_pred HHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHH----------------------------
Confidence 88885542 4 58999998877632111 13445555555544
Q ss_pred cccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecC----CcEEecCEEEEeeccCcCcccccCC-CCceecC
Q psy1545 216 WHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTN----GHTHACDIVVSAIGVVPNSNIQVHG-TPFELAP 290 (454)
Q Consensus 216 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~----g~~~~~D~vi~a~G~~p~~~~~~~~-~~l~~~~ 290 (454)
.||++++++.|++++.++ +.+++ ++++++|.+++++|++|+.. +... .++ .++
T Consensus 213 -------------~GV~i~~~~~v~~v~~~~-------v~~~~~~~~g~~i~~D~vv~a~G~~~~~~-l~~~~~gl-~~~ 270 (430)
T 3h28_A 213 -------------RNIDWIANVAVKAIEPDK-------VIYEDLNGNTHEVPAKFTMFMPSFQGPEV-VASAGDKV-ANP 270 (430)
T ss_dssp -------------TTCEEECSCEEEEECSSE-------EEEECTTSCEEEEECSEEEEECEEECCHH-HHTTCTTT-BCT
T ss_pred -------------CCCEEEeCCEEEEEeCCe-------EEEEecCCCceEEeeeEEEECCCCccchh-HhhccccC-cCC
Confidence 899999999999997653 44554 67899999999999998764 3333 567 577
Q ss_pred CC-ceEecccccc-ccCceeecCcccccCCcc-ccch-hhccChHHHHHHHHHHHhhhcCCCCCCcc
Q psy1545 291 DC-GIGVNELMQT-SISNVYAAGDVCTPSWDL-AKQW-FQMRLWTQAKHMGTYAAKCMVGAVKNEPV 353 (454)
Q Consensus 291 ~g-~i~vd~~~~t-~~~~Iya~GD~~~~~~~~-~~~~-~~~~~~~~A~~~g~~aa~~i~~~~~~~~~ 353 (454)
+| +|.||+++|| ++|||||+|||+..+... .+.+ ..+++++.|..||++||+||...+.+++.
T Consensus 271 ~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~ 337 (430)
T 3h28_A 271 ANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPD 337 (430)
T ss_dssp TTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 89 9999999997 999999999999864211 0000 12467899999999999999998877654
No 69
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=2.7e-36 Score=290.37 Aligned_cols=280 Identities=15% Similarity=0.219 Sum_probs=211.6
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccc--cccc----cccc---ccchhhhHHHHHhc-CcEEE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKT--VPVT----KLLS---DITVEETDANKFEG-LCTVI 72 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~--~~~~----~~~~---~~~~~~~~~~~~~~-~i~~~ 72 (454)
+||+|||||+||+++|..|++. +.+|+|||+++.+++.+.. +... .... ..++.....+.+.+ +++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMR--QASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTIC 85 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHC--CCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEE
Confidence 6999999999999999999998 8999999999877654421 1100 0011 11222223333444 89987
Q ss_pred -cceEEEEeCccc---EEEeccCcEEEecEEEEecCC---CCCCCCCC--Cc----eeeeeccchHHHHHHHhhcCCeEE
Q psy1545 73 -VDTVAAIDPRVN---CVITEKQNRIKYKTLCICTGA---SPRKIWYS--PH----VITIRDTDSVAVLQEKLKSAKKIV 139 (454)
Q Consensus 73 -~~~v~~i~~~~~---~v~~~~g~~i~~d~lviAtG~---~p~~~~~~--~~----~~~~~~~~~~~~l~~~~~~~~~vv 139 (454)
..+|+.++.... .|.+.+++ +.||+||+|||+ .|+.|+++ .. .... ...+...+ ++++++
T Consensus 86 ~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~~~~-----~~~~v~ 158 (332)
T 3lzw_A 86 LEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDDLQKF-----AGRRVA 158 (332)
T ss_dssp CSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSCGGGG-----BTCEEE
T ss_pred ccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCCHHHc-----CCCEEE
Confidence 469999987765 67776665 999999999999 78877776 11 1111 23333322 389999
Q ss_pred EEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccc
Q psy1545 140 VIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWH 217 (454)
Q Consensus 140 VvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 217 (454)
|||+|.+|+|+|..+. +.+|+++++++++.+. ....+.+
T Consensus 159 vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~-------~~~~~~l-------------------------------- 199 (332)
T 3lzw_A 159 ILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH-------EHSVENL-------------------------------- 199 (332)
T ss_dssp EECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC-------HHHHHHH--------------------------------
T ss_pred EECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc-------HHHHHHH--------------------------------
Confidence 9999999999999997 8899999998876431 1112233
Q ss_pred cccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecC-----CcEEecCEEEEeeccCcCcccccCCCCceecCCC
Q psy1545 218 TQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTN-----GHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDC 292 (454)
Q Consensus 218 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~-----g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g 292 (454)
++.||++++++.+.++..+++ ...+.+++ ++++++|.|++|+|++|+.+ +++..++.+ ++|
T Consensus 200 ---------~~~gv~~~~~~~v~~i~~~~~---~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~-~~~~~~~~~-~~g 265 (332)
T 3lzw_A 200 ---------HASKVNVLTPFVPAELIGEDK---IEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLG-PIKNWGLDI-EKN 265 (332)
T ss_dssp ---------HHSSCEEETTEEEEEEECSSS---CCEEEEEETTSCCEEEEECSEEEECCCEECCCG-GGGGSSCCE-ETT
T ss_pred ---------hcCCeEEEeCceeeEEecCCc---eEEEEEEecCCCceEEEECCEEEEeeccCCCch-HHhhcCccc-cCC
Confidence 338999999999999988653 45566665 36799999999999999998 888888887 689
Q ss_pred ceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCC
Q psy1545 293 GIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNE 351 (454)
Q Consensus 293 ~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 351 (454)
+|.||+++||+.|+|||+|||+..+. .++++..|..||+.||.||...+.++
T Consensus 266 ~i~vd~~~~t~~~~vya~GD~~~~~~-------~~~~~~~A~~~g~~aa~~i~~~l~~~ 317 (332)
T 3lzw_A 266 SIVVKSTMETNIEGFFAAGDICTYEG-------KVNLIASGFGEAPTAVNNAKAYMDPK 317 (332)
T ss_dssp EEECCTTSBCSSTTEEECGGGEECTT-------CCCCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred eEEeCCCCceecCCEEEccceecCCC-------CcceEeeehhhHHHHHHHHHHhhChh
Confidence 99999999999999999999996421 24688999999999999999876554
No 70
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.9e-36 Score=287.18 Aligned_cols=284 Identities=18% Similarity=0.156 Sum_probs=206.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccc------cccccccccccchhhhHHHHHhc-CcEEEcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTK------TVPVTKLLSDITVEETDANKFEG-LCTVIVD 74 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~ 74 (454)
++||+|||||++|+++|..|++. +.+|+|||+....+.+.. ++.++.......+.....+.+.+ +++++.+
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 91 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARA--QLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRME 91 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHT--TCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEe
Confidence 47999999999999999999998 899999998644332211 11111111111222222333444 8999888
Q ss_pred eEEEEeCc-ccEE-EeccCcEEEecEEEEecCCCCCCCCCC-Cce---eeeeccchHHHHHHHhhcCCeEEEEcCchhHH
Q psy1545 75 TVAAIDPR-VNCV-ITEKQNRIKYKTLCICTGASPRKIWYS-PHV---ITIRDTDSVAVLQEKLKSAKKIVVIGNGGIAT 148 (454)
Q Consensus 75 ~v~~i~~~-~~~v-~~~~g~~i~~d~lviAtG~~p~~~~~~-~~~---~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~ 148 (454)
++..++.. ...| .+.+++.+.||+||+|||++|+.|+++ ... ..+++.. .....+..+++++|||+|.+|+
T Consensus 92 ~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~---~~~~~~~~~~~v~ViG~G~~g~ 168 (335)
T 2a87_A 92 DVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCA---TCDGFFFRDQDIAVIGGGDSAM 168 (335)
T ss_dssp CEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCH---HHHGGGGTTCEEEEECSSHHHH
T ss_pred eEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEee---ccchhhcCCCEEEEECCCHHHH
Confidence 88888862 2356 677788999999999999999888877 111 1122211 2222234589999999999999
Q ss_pred HHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCc
Q psy1545 149 ELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSS 226 (454)
Q Consensus 149 e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l 226 (454)
|+|..|. +.+|++++|++++.. .+.+.+.+ +
T Consensus 169 e~a~~l~~~g~~V~l~~~~~~~~~-------~~~~~~~~----------------------------------------~ 201 (335)
T 2a87_A 169 EEATFLTRFARSVTLVHRRDEFRA-------SKIMLDRA----------------------------------------R 201 (335)
T ss_dssp HHHHHHTTTCSEEEEECSSSSCSS-------CTTHHHHH----------------------------------------H
T ss_pred HHHHHHHHhCCeEEEEEcCCcCCc-------cHHHHHHH----------------------------------------h
Confidence 9999997 899999999876532 12222222 1
Q ss_pred cCCceEEEeCceEEEEEcCCCCccceEEEec---CC--cEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccc-c
Q psy1545 227 RDTKITIEYSCEVERIVDSEDDTCNAYVKLT---NG--HTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNEL-M 300 (454)
Q Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~---~g--~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~-~ 300 (454)
++.||++++++.+.++..++. ...+.++ +| +++++|.|++|+|++|+.+ ++. .++.++++|+|.||++ +
T Consensus 202 ~~~gV~v~~~~~v~~i~~~~~---~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~-~~~-~~l~~~~~G~i~vd~~~~ 276 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGDTT---VTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSG-LVR-EAIDVDPDGYVLVQGRTT 276 (335)
T ss_dssp HCTTEEEECSEEEEEEECSSS---CCEEEEEEETTSCCEEECCSCEEECSCEEECCT-TTB-TTBCBCTTSCBCCSTTSS
T ss_pred ccCCcEEEeCceeEEEecCCc---EeEEEEEEcCCCceEEeecCEEEEccCCccChh-Hhh-cccccCCCccEEeCCCCC
Confidence 238999999999999987652 2334443 44 5799999999999999998 776 4688888899999986 6
Q ss_pred ccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCC
Q psy1545 301 QTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNE 351 (454)
Q Consensus 301 ~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 351 (454)
+|+.|+|||+|||+..+ ++.+..|..||+.||.||...+.++
T Consensus 277 ~t~~~~iya~GD~~~~~---------~~~~~~A~~~g~~aA~~i~~~l~~~ 318 (335)
T 2a87_A 277 STSLPGVFAAGDLVDRT---------YRQAVTAAGSGCAAAIDAERWLAEH 318 (335)
T ss_dssp BCSSTTEEECGGGTCCS---------CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeecCCcc---------HHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 89999999999999753 3567889999999999998766443
No 71
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=4.5e-36 Score=289.25 Aligned_cols=289 Identities=19% Similarity=0.161 Sum_probs=206.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECC----CCcccccccc-------ccccccccccchhhhHHHHHhc-Cc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTP----SGIVKAVTKT-------VPVTKLLSDITVEETDANKFEG-LC 69 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~----~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~i 69 (454)
++||+|||||++|+++|..|++. +.+|+|+|+ ....++.+.. +.++......++.....+.+.+ ++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv 85 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARA--ELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGT 85 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCC
Confidence 37999999999999999999998 899999998 3333222211 1111111111222223333444 89
Q ss_pred EEEcceEEEEeCccc--EEEeccCcEEEecEEEEecCCCCCCCCCC--Cc---eeeeeccchHHHHHHHh--hcCCeEEE
Q psy1545 70 TVIVDTVAAIDPRVN--CVITEKQNRIKYKTLCICTGASPRKIWYS--PH---VITIRDTDSVAVLQEKL--KSAKKIVV 140 (454)
Q Consensus 70 ~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lviAtG~~p~~~~~~--~~---~~~~~~~~~~~~l~~~~--~~~~~vvV 140 (454)
+++.+++..++.... .|.+ ++..++||+||+|||++|..|+++ .. .+..........+...+ ..+++++|
T Consensus 86 ~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V 164 (333)
T 1vdc_A 86 TIFTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAV 164 (333)
T ss_dssp EEECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEE
T ss_pred EEEEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEE
Confidence 998888888887654 5666 677899999999999998888776 11 12111111122222222 45899999
Q ss_pred EcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcccc
Q psy1545 141 IGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHT 218 (454)
Q Consensus 141 vG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 218 (454)
||+|.+|+|+|..|. +.+|+++++++.+.. ...+.+.+
T Consensus 165 vG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-------~~~~~~~~--------------------------------- 204 (333)
T 1vdc_A 165 IGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA-------SKIMQQRA--------------------------------- 204 (333)
T ss_dssp ECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHHHHHHH---------------------------------
T ss_pred ECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-------cHHHHHHH---------------------------------
Confidence 999999999999997 899999999876532 12222221
Q ss_pred ccccccCccCCceEEEeCceEEEEEcCCCCccceEEEec---CC--cEEecCEEEEeeccCcCcccccCCCCceecCCCc
Q psy1545 219 QVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT---NG--HTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCG 293 (454)
Q Consensus 219 ~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~---~g--~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~ 293 (454)
+++.||++++++.+.++..+++......+.++ +| +++++|.|++|+|++|+.+ +++ .++.++++|+
T Consensus 205 -------~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~-~~~-~~l~~~~~G~ 275 (333)
T 1vdc_A 205 -------LSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATK-FLD-GGVELDSDGY 275 (333)
T ss_dssp -------HTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCG-GGT-TSSCBCTTSC
T ss_pred -------HhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchH-Hhh-ccccccCCCC
Confidence 13489999999999999875420023335554 45 5799999999999999998 776 4678888899
Q ss_pred eEeccc-cccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCC
Q psy1545 294 IGVNEL-MQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNE 351 (454)
Q Consensus 294 i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 351 (454)
|.||++ ++|+.|+|||+|||+..+ ++.+..|..||+.||.+|...+.++
T Consensus 276 i~vd~~~~~t~~~~vya~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~l~~~ 325 (333)
T 1vdc_A 276 VVTKPGTTQTSVPGVFAAGDVQDKK---------YRQAITAAGTGCMAALDAEHYLQEI 325 (333)
T ss_dssp BCCCTTSCBCSSTTEEECGGGGCSS---------CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEechhhcccCCCCEEEeeeccCCC---------chhHHHHHHhHHHHHHHHHHHHHhc
Confidence 999987 589999999999999753 3578889999999999999766443
No 72
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.7e-35 Score=288.47 Aligned_cols=288 Identities=20% Similarity=0.228 Sum_probs=209.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccc--ccc----cccc---cccchhhhHHHHHhc-CcEE
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKT--VPV----TKLL---SDITVEETDANKFEG-LCTV 71 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~--~~~----~~~~---~~~~~~~~~~~~~~~-~i~~ 71 (454)
++||+|||||++|+++|..|++. +.+|+|||+.+.+++.+.. +.. ...+ ....+.....+.+.+ ++++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 91 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMN--NISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDV 91 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEE
Confidence 47999999999999999999997 8999999998776543321 100 0001 111222233334445 8888
Q ss_pred Ec-ceEEEEeCccc---EEEeccCcEEEecEEEEecCCC---CCCCCCCC--ceee---e-eccchHHHHHHHhhcCCeE
Q psy1545 72 IV-DTVAAIDPRVN---CVITEKQNRIKYKTLCICTGAS---PRKIWYSP--HVIT---I-RDTDSVAVLQEKLKSAKKI 138 (454)
Q Consensus 72 ~~-~~v~~i~~~~~---~v~~~~g~~i~~d~lviAtG~~---p~~~~~~~--~~~~---~-~~~~~~~~l~~~~~~~~~v 138 (454)
+. .+|+.++.... .|.+.+++.+.||+||+|||+. |..++++. ..+. + ....+...+ .++++
T Consensus 92 ~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~~~-----~~~~v 166 (360)
T 3ab1_A 92 VLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDF-----KGKRV 166 (360)
T ss_dssp ECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGGGG-----TTCEE
T ss_pred EcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHHHc-----CCCcE
Confidence 64 48999886543 6777778899999999999994 54444332 0010 1 111222211 38999
Q ss_pred EEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcc
Q psy1545 139 VVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDW 216 (454)
Q Consensus 139 vVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 216 (454)
+|||+|.+|+|+|..|. +.+|+++++++.+.+ .++..+.+.+.+
T Consensus 167 vVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~~~~l~~~~------------------------------- 212 (360)
T 3ab1_A 167 VIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG---HGKTAHEVERAR------------------------------- 212 (360)
T ss_dssp EEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS---CSHHHHSSHHHH-------------------------------
T ss_pred EEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC---CHHHHHHHHHHh-------------------------------
Confidence 99999999999999997 899999999887654 233333333333
Q ss_pred ccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEec--CC--cEEecCEEEEeeccCcCcccccCCCCceecCCC
Q psy1545 217 HTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT--NG--HTHACDIVVSAIGVVPNSNIQVHGTPFELAPDC 292 (454)
Q Consensus 217 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~--~g--~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g 292 (454)
++.||++++++.+.++..+++ ....+.+. +| +++++|.|++|+|++|+.+ +++..++.++ +|
T Consensus 213 ----------~~~gv~i~~~~~v~~i~~~~~--~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~-~l~~~~~~~~-~g 278 (360)
T 3ab1_A 213 ----------ANGTIDVYLETEVASIEESNG--VLTRVHLRSSDGSKWTVEADRLLILIGFKSNLG-PLARWDLELY-EN 278 (360)
T ss_dssp ----------HHTSEEEESSEEEEEEEEETT--EEEEEEEEETTCCEEEEECSEEEECCCBCCSCG-GGGGSSCCEE-TT
T ss_pred ----------hcCceEEEcCcCHHHhccCCC--ceEEEEEEecCCCeEEEeCCEEEECCCCCCCHH-HHHhhccccc-cC
Confidence 337999999999999987542 22345553 77 6799999999999999998 8888888876 79
Q ss_pred ceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCC
Q psy1545 293 GIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNE 351 (454)
Q Consensus 293 ~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 351 (454)
+|.||+++||+.|+|||+|||+..+. .++++..|..||++||+||.+.+.+.
T Consensus 279 ~i~vd~~~~t~~~~vya~GD~~~~~~-------~~~~~~~A~~~g~~aa~~i~~~l~~~ 330 (360)
T 3ab1_A 279 ALVVDSHMKTSVDGLYAAGDIAYYPG-------KLKIIQTGLSEATMAVRHSLSYIKPG 330 (360)
T ss_dssp EEECCTTSBCSSTTEEECSTTEECTT-------CCCSHHHHHHHHHHHHHHHHHHHSCC
T ss_pred eeeecCCCcCCCCCEEEecCccCCCC-------ccceeehhHHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999997431 14678899999999999999766543
No 73
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=6.2e-36 Score=296.54 Aligned_cols=287 Identities=17% Similarity=0.169 Sum_probs=222.4
Q ss_pred ccEEEECCCHHHHHHHHHHhh-cCCCCeEEEECCCCccccccccccccccc-cccchhhhHHHHHhc-CcEEEcceEEEE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAF-LHPGESIGLVTPSGIVKAVTKTVPVTKLL-SDITVEETDANKFEG-LCTVIVDTVAAI 79 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~-~~~g~~v~lie~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~i~~~~~~v~~i 79 (454)
+||+|||||++|+++|..|++ ..++.+|+|||+++.+.+....+...... ...++.....+.+.+ +++++.++|+.+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKI 81 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEE
Confidence 589999999999999999999 33389999999998765433332221111 122233334445555 999998899999
Q ss_pred eCcccEEEeccCc----EEEecEEEEecCCCCCCCCCC---CceeeeeccchHHHHHHHhhcC-CeEEEEcCch------
Q psy1545 80 DPRVNCVITEKQN----RIKYKTLCICTGASPRKIWYS---PHVITIRDTDSVAVLQEKLKSA-KKIVVIGNGG------ 145 (454)
Q Consensus 80 ~~~~~~v~~~~g~----~i~~d~lviAtG~~p~~~~~~---~~~~~~~~~~~~~~l~~~~~~~-~~vvVvG~G~------ 145 (454)
+++.+.|.+.+++ ++.||+||+|||++|+.|+++ +..+++.+.+++.++.+.+... ++++|||+|.
T Consensus 82 ~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~ 161 (409)
T 3h8l_A 82 DAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHN 161 (409)
T ss_dssp ETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCS
T ss_pred eCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCC
Confidence 9998888887765 399999999999999888777 3456777888888888766543 6778999992
Q ss_pred -------------------hHHHHHHHh----c--C----CcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhh
Q psy1545 146 -------------------IATELVHEL----S--N----VDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETI 196 (454)
Q Consensus 146 -------------------~g~e~a~~l----~--g----~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~ 196 (454)
.++|+|..+ . | .+|+++++.+ +++. ++++..+.+.+.+.+
T Consensus 162 ~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~-~~~~~~~~~~~~l~~--------- 230 (409)
T 3h8l_A 162 PKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSD-LSPNSRKAVASIYNQ--------- 230 (409)
T ss_dssp SCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTT-BCHHHHHHHHHHHHH---------
T ss_pred ccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccc-cCHHHHHHHHHHHHH---------
Confidence 477888544 2 5 4899999988 5543 566666666666654
Q ss_pred hhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcC
Q psy1545 197 FKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPN 276 (454)
Q Consensus 197 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~ 276 (454)
.||++++++.|++++.++ +.+++|+++++|.+++++|++|+
T Consensus 231 --------------------------------~gV~~~~~~~v~~i~~~~-------v~~~~g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 231 --------------------------------LGIKLVHNFKIKEIREHE-------IVDEKGNTIPADITILLPPYTGN 271 (409)
T ss_dssp --------------------------------HTCEEECSCCEEEECSSE-------EEETTSCEEECSEEEEECCEECC
T ss_pred --------------------------------CCCEEEcCCceEEECCCe-------EEECCCCEEeeeEEEECCCCCcc
Confidence 899999999999997643 78889999999999999999998
Q ss_pred cccccCCCCce-ecCCCceEecccccc-ccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCC
Q psy1545 277 SNIQVHGTPFE-LAPDCGIGVNELMQT-SISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVK 349 (454)
Q Consensus 277 ~~~~~~~~~l~-~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 349 (454)
. ++...+.. .+++|+|.||+++|| +.|||||+|||+..+ .+++++.|..||++||+||.+.+.
T Consensus 272 ~--~l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~--------~~~~~~~A~~q~~~aa~~i~~~l~ 336 (409)
T 3h8l_A 272 P--ALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMT--------VPKLGYLAVMTGRIAAQHLANRLG 336 (409)
T ss_dssp H--HHHTSCGGGSCTTSCBCBBTTSBBSSCTTEEECGGGBTTC--------CSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred H--HHHhccccCcCCCCCEEeCcccccCCCCCEEEeehhccCC--------CCcHHHHHHHHHHHHHHHHHHHhc
Confidence 5 66666322 367899999999998 899999999999753 136788999999999999998773
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.5e-34 Score=280.93 Aligned_cols=310 Identities=15% Similarity=0.132 Sum_probs=197.6
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccc-------------cccc-----ccc----cchh
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVP-------------VTKL-----LSD----ITVE 58 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~-------------~~~~-----~~~----~~~~ 58 (454)
+++||+|||||++|+++|..|++. +.+|+|||+++.+++.+.... ++.. ... ..+.
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~--g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRS--GLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVL 79 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHS--SCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHH
Confidence 058999999999999999999998 899999999977654433210 0000 000 0111
Q ss_pred hhHHHHHhc-CcEEEcc-eEEEEeCcccE---EEeccCcEEEecEEEEecCC--CCCCCCCC--C----ceeeeeccchH
Q psy1545 59 ETDANKFEG-LCTVIVD-TVAAIDPRVNC---VITEKQNRIKYKTLCICTGA--SPRKIWYS--P----HVITIRDTDSV 125 (454)
Q Consensus 59 ~~~~~~~~~-~i~~~~~-~v~~i~~~~~~---v~~~~g~~i~~d~lviAtG~--~p~~~~~~--~----~~~~~~~~~~~ 125 (454)
....+...+ +++++.+ +|+.++.+... |.++++ ++.||+||+|||. +|+.|+++ . ...+.....+.
T Consensus 80 ~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 158 (357)
T 4a9w_A 80 AYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTP 158 (357)
T ss_dssp HHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCS
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCCh
Confidence 111222233 8888754 89999876654 666666 8999999999995 56667766 1 12222122222
Q ss_pred HHHHHHhhcCCeEEEEcCchhHHHHHHHhc-CCcEEEEEeC-CCccccccC-CcchhhhHHHhhccCCCChhhhhhhccc
Q psy1545 126 AVLQEKLKSAKKIVVIGNGGIATELVHELS-NVDIVWVVKD-KHISATFLD-PGAAEFFQDSINKTNTAKPETIFKRMRY 202 (454)
Q Consensus 126 ~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~-g~~V~~i~~~-~~~~~~~~d-~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 202 (454)
..+ .+++++|||+|.+|+|+|..|. -.+|+++.++ +.+++..++ ..+...+.+.+.+. ....+
T Consensus 159 ~~~-----~~~~v~VvG~G~~g~e~a~~l~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 224 (357)
T 4a9w_A 159 APF-----AGMRVAIIGGGNSGAQILAEVSTVAETTWITQHEPAFLADDVDGRVLFERATERWKAQ---------QEGRE 224 (357)
T ss_dssp GGG-----TTSEEEEECCSHHHHHHHHHHTTTSEEEEECSSCCCBCCTTCCTHHHHTC----------------------
T ss_pred hhc-----CCCEEEEECCCcCHHHHHHHHHhhCCEEEEECCCCeecchhhcCccHHHHHHHHHhcc---------ccccC
Confidence 211 4799999999999999999997 2369999988 555554222 12222222222110 00000
Q ss_pred ccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccC
Q psy1545 203 NTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVH 282 (454)
Q Consensus 203 ~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~ 282 (454)
... .........+...+ .+. .+.|+ +..+..+.+++..+ +.+++|+++++|.|++|+|++|+.+ +++
T Consensus 225 ~~~-~~~~~~~~~~~~~~--~~~-~~~g~-i~~~~~v~~~~~~~-------v~~~~g~~i~~D~vi~a~G~~p~~~-~l~ 291 (357)
T 4a9w_A 225 PDL-PPGGFGDIVMVPPV--LDA-RARGV-LAAVPPPARFSPTG-------MQWADGTERAFDAVIWCTGFRPALS-HLK 291 (357)
T ss_dssp ----------CBCCCHHH--HHH-HHTTC-CCEECCCSEEETTE-------EECTTSCEEECSEEEECCCBCCCCG-GGT
T ss_pred CCc-ccccccCcccChhH--HHH-HhcCc-eEEecCcceEeCCe-------eEECCCCEecCCEEEECCCcCCCCc-ccC
Confidence 000 00000000011100 011 12444 45556677776543 7889999999999999999999998 998
Q ss_pred CCCceecCCCceEeccc--cccccCceeecC--cccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCC
Q psy1545 283 GTPFELAPDCGIGVNEL--MQTSISNVYAAG--DVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKN 350 (454)
Q Consensus 283 ~~~l~~~~~g~i~vd~~--~~t~~~~Iya~G--D~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 350 (454)
..++. +++|+|.||++ ++|+.|||||+| ||+... .+....|..||+.+|+||...+.+
T Consensus 292 ~~gl~-~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~---------~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 292 GLDLV-TPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMA---------SATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp TTTCB-CTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTT---------CSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred ccccc-CCCCCccccCCcccCCCCCCeEEeccccccccc---------hhhhhhhHHHHHHHHHHHHHHHHh
Confidence 88888 78899999999 889999999999 555422 245667999999999999987765
No 75
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=7.2e-34 Score=289.33 Aligned_cols=278 Identities=21% Similarity=0.256 Sum_probs=205.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccccc-----ccccchhhhHHHHHhc-CcEEEcc-
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKL-----LSDITVEETDANKFEG-LCTVIVD- 74 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~i~~~~~- 74 (454)
.+||+|||||+||+++|..|++. |.+|+|+|+.. .+.+......... .....+.......+.+ +++++.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~--G~~v~lie~~~-GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~ 288 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARK--GIRTGLMGERF-GGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQ 288 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSST-TGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSC
T ss_pred cccEEEECCcHHHHHHHHHHHhC--CCeEEEEECCC-CCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCC
Confidence 47999999999999999999998 89999998742 2221111111100 0111222233344445 9999877
Q ss_pred eEEEEeCc-----ccEEEeccCcEEEecEEEEecCCCCCCCCCC-C------ceeeeeccchHHHHHHHhhcCCeEEEEc
Q psy1545 75 TVAAIDPR-----VNCVITEKQNRIKYKTLCICTGASPRKIWYS-P------HVITIRDTDSVAVLQEKLKSAKKIVVIG 142 (454)
Q Consensus 75 ~v~~i~~~-----~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~-~------~~~~~~~~~~~~~l~~~~~~~~~vvVvG 142 (454)
+|+.++++ ...|.+++|..+.||++|+|||++|+.|+++ . .++.....+ .....+++++|||
T Consensus 289 ~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~------~~~~~~k~V~ViG 362 (521)
T 1hyu_A 289 SASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCD------GPLFKGKRVAVIG 362 (521)
T ss_dssp CEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCC------GGGGBTSEEEEEC
T ss_pred EEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCc------hhhcCCCeEEEEC
Confidence 99999764 3567787888999999999999998887776 1 122111111 1223589999999
Q ss_pred CchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcccccc
Q psy1545 143 NGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQV 220 (454)
Q Consensus 143 ~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 220 (454)
+|.+|+|+|..|+ +.+|+++++.+++.. + ..+.+.+.+
T Consensus 363 gG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~----~~l~~~l~~--------------------------------- 402 (521)
T 1hyu_A 363 GGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVLQDKVRS--------------------------------- 402 (521)
T ss_dssp CSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C----HHHHHHHTT---------------------------------
T ss_pred CCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C----HHHHHHHhc---------------------------------
Confidence 9999999999987 899999999887643 1 233333321
Q ss_pred ccccCccCCceEEEeCceEEEEEcCCCCccceEEEecC---C--cEEecCEEEEeeccCcCcccccCCCCceecCCCceE
Q psy1545 221 NLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTN---G--HTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIG 295 (454)
Q Consensus 221 ~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~---g--~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~ 295 (454)
..||++++++.++++..+++ ....+.+.+ | .++++|.|++++|++|+++ ++.. .+.++++|+|.
T Consensus 403 -------~~gV~v~~~~~v~~i~~~~~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~-~l~~-~l~~~~~G~I~ 471 (521)
T 1hyu_A 403 -------LKNVDIILNAQTTEVKGDGS--KVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTH-WLEG-ALERNRMGEII 471 (521)
T ss_dssp -------CTTEEEECSEEEEEEEECSS--SEEEEEEEETTTCCEEEEECSEEEECCCEEESCG-GGTT-TSCBCTTSCBC
T ss_pred -------CCCcEEEeCCEEEEEEcCCC--cEEEEEEEeCCCCceEEEEcCEEEECcCCCCCch-HHhh-hhccCCCCcEE
Confidence 15999999999999987542 233456543 5 3689999999999999998 8776 47788889999
Q ss_pred eccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCC
Q psy1545 296 VNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAV 348 (454)
Q Consensus 296 vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (454)
||+++||+.|+|||+|||+..+ .+.+..|+.||+.||.+|...+
T Consensus 472 Vd~~~~ts~p~VfA~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~L 515 (521)
T 1hyu_A 472 IDAKCETSVKGVFAAGDCTTVP---------YKQIIIATGEGAKASLSAFDYL 515 (521)
T ss_dssp CCTTCBCSSTTEEECSTTBCCS---------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCCCCCCEEEeecccCCC---------cceeeehHHhHHHHHHHHHHHH
Confidence 9999999999999999999854 3567889999999999998644
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=6.8e-34 Score=277.90 Aligned_cols=287 Identities=14% Similarity=0.113 Sum_probs=192.7
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCCcccccc-ccccc----cc-------cc---------------
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSGIVKAVT-KTVPV----TK-------LL--------------- 52 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~~~~~~~-~~~~~----~~-------~~--------------- 52 (454)
+++||+|||||++|+++|..|++. +. +|+|||+++ .++.+ +++.. .. .+
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~--g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 79 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDF--GITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFT 79 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHc--CCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccc
Confidence 148999999999999999999998 77 999999987 33222 11100 00 00
Q ss_pred --ccc---chhhhHHHH-Hhc-CcEEEcc-eEEEEeCc--ccEEEeccCcEEEecEEEEecCCCCCCCCCC-Cceeeeec
Q psy1545 53 --SDI---TVEETDANK-FEG-LCTVIVD-TVAAIDPR--VNCVITEKQNRIKYKTLCICTGASPRKIWYS-PHVITIRD 121 (454)
Q Consensus 53 --~~~---~~~~~~~~~-~~~-~i~~~~~-~v~~i~~~--~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~-~~~~~~~~ 121 (454)
..+ .....+... +.+ +++++.+ +|+.++++ ...|.+.++ .+.||+||+|||+.+. |.+| +...+...
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~-p~ip~~~~~~~~~ 157 (369)
T 3d1c_A 80 FNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF-PKKPFKYGIHYSE 157 (369)
T ss_dssp HCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS-BCCCSSSCEEGGG
T ss_pred ccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc-cCCCCCceechhh
Confidence 000 000111222 233 8998765 78888865 346666555 6999999999999765 3444 23333333
Q ss_pred cchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcc------hhhhHHHhhccCCCCh
Q psy1545 122 TDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGA------AEFFQDSINKTNTAKP 193 (454)
Q Consensus 122 ~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~------~~~~~~~l~~~~~~~~ 193 (454)
..+...+ ++++++|||+|.+|+|+|..|. +.+|+++++++.+++..++++. .+.+.+.+
T Consensus 158 ~~~~~~~-----~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l-------- 224 (369)
T 3d1c_A 158 IEDFDNF-----NKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVI-------- 224 (369)
T ss_dssp CSCGGGS-----CSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHH--------
T ss_pred cCChhhc-----CCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHH--------
Confidence 3222211 3679999999999999999986 9999999999887743334332 23333333
Q ss_pred hhhhhhcccccCCCCCCCCCCccccccccccCccCCc-eEEEeCceEEEEEcCCCCccceEEEecCCcEEe-cCEEEEee
Q psy1545 194 ETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTK-ITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHA-CDIVVSAI 271 (454)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~g-v~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~-~D~vi~a~ 271 (454)
++.| |++++++.|.+++..++ ...+.+.+|+++. +|.|++|+
T Consensus 225 ---------------------------------~~~g~v~~~~~~~v~~i~~~~~---~~~v~~~~g~~~~~~d~vi~a~ 268 (369)
T 3d1c_A 225 ---------------------------------KQGARIEMNVHYTVKDIDFNNG---QYHISFDSGQSVHTPHEPILAT 268 (369)
T ss_dssp ---------------------------------HTTCCEEEECSCCEEEEEEETT---EEEEEESSSCCEEESSCCEECC
T ss_pred ---------------------------------hhCCcEEEecCcEEEEEEecCC---ceEEEecCCeEeccCCceEEee
Confidence 3476 99999999999975432 4567888887665 69999999
Q ss_pred ccCcCcccccCCCCceecCCCceEeccc-cccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCC
Q psy1545 272 GVVPNSNIQVHGTPFELAPDCGIGVNEL-MQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVK 349 (454)
Q Consensus 272 G~~p~~~~~~~~~~l~~~~~g~i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 349 (454)
|++|+.+ ++...+++ +++|++.||++ ++|+.|+|||+|||+..+... ...++.+.+||+++|++|.+...
T Consensus 269 G~~~~~~-~~~~~~~~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~------~~~~~~~~~~a~~~a~~l~~~~~ 339 (369)
T 3d1c_A 269 GFDATKN-PIVQQLFV-TTNQDIKLTTHDESTRYPNIFMIGATVENDNAK------LCYIYKFRARFAVLAHLLTQREG 339 (369)
T ss_dssp CBCGGGS-HHHHHHSC-CTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCC------CCSHHHHGGGHHHHHHHHHHHTT
T ss_pred ccCCccc-hhhhhhcc-CCCCCEEechhhcccCCCCeEEeccccccCCee------EEEEehhhHHHHHHHHHHhcccC
Confidence 9999996 55444455 67888999976 669999999999998754221 12345688899999999988654
No 77
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=2e-32 Score=274.82 Aligned_cols=266 Identities=12% Similarity=0.098 Sum_probs=190.4
Q ss_pred CcccEEEECCCHHHHHHHHHHhh---cCCCCe---EEEECCCCcccccccccccc----------------------c--
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAF---LHPGES---IGLVTPSGIVKAVTKTVPVT----------------------K-- 50 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~---~~~g~~---v~lie~~~~~~~~~~~~~~~----------------------~-- 50 (454)
|.+||+|||||++|++||..|++ . |.+ |+|||+++..++.+.+.... .
T Consensus 1 M~~~V~IIGaG~aGl~aA~~L~~~~~~--G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~ 78 (464)
T 2xve_A 1 MATRIAILGAGPSGMAQLRAFQSAQEK--GAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKEC 78 (464)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHHHT--TCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGG
T ss_pred CCCcEEEECccHHHHHHHHHHHhhhhc--CCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhh
Confidence 77899999999999999999999 7 888 99999998766555431100 0
Q ss_pred -cccccch-------------hhh---HHHHH-hc-CcE--EE-cceEEEEeCccc----EEEecc---C--cEEEecEE
Q psy1545 51 -LLSDITV-------------EET---DANKF-EG-LCT--VI-VDTVAAIDPRVN----CVITEK---Q--NRIKYKTL 99 (454)
Q Consensus 51 -~~~~~~~-------------~~~---~~~~~-~~-~i~--~~-~~~v~~i~~~~~----~v~~~~---g--~~i~~d~l 99 (454)
.+..+.+ ... ++..+ .+ +++ +. ..+|+.++.... .|++.+ | .++.||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~V 158 (464)
T 2xve_A 79 LEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYV 158 (464)
T ss_dssp TCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEE
T ss_pred cccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEE
Confidence 0001100 011 12222 22 665 54 568888876543 666654 3 57899999
Q ss_pred EEecC--CCCCCCCCC--C----ceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcc
Q psy1545 100 CICTG--ASPRKIWYS--P----HVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHIS 169 (454)
Q Consensus 100 viAtG--~~p~~~~~~--~----~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~ 169 (454)
|+||| +.|+.|+++ + .+.+.....+... ..+++++|||+|.+|+|+|..|+ +.+|+++++++.++
T Consensus 159 VvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~-----~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~ 233 (464)
T 2xve_A 159 VCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALE-----FKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM 233 (464)
T ss_dssp EECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGG-----GTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC
T ss_pred EECCCCCCCCccCCCCCcccCCceEEehhhhCCHhH-----cCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC
Confidence 99999 789888876 1 1233223333222 14899999999999999999997 99999999887654
Q ss_pred ccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCc
Q psy1545 170 ATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDT 249 (454)
Q Consensus 170 ~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~ 249 (454)
+.. + ..||+++ ..|++++.+
T Consensus 234 ~~~------------~------------------------------------------~~~V~~~--~~V~~i~~~---- 253 (464)
T 2xve_A 234 GYK------------W------------------------------------------PENWDER--PNLVRVDTE---- 253 (464)
T ss_dssp CCC------------C------------------------------------------CTTEEEC--SCEEEECSS----
T ss_pred CCC------------C------------------------------------------CCceEEc--CCeEEEeCC----
Confidence 320 0 1577776 678888643
Q ss_pred cceEEEecCCcEEecCEEEEeeccCcCcccccCC-CCceecCCCceEeccc---cccccCceeecCcccccCCccccchh
Q psy1545 250 CNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHG-TPFELAPDCGIGVNEL---MQTSISNVYAAGDVCTPSWDLAKQWF 325 (454)
Q Consensus 250 ~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~-~~l~~~~~g~i~vd~~---~~t~~~~Iya~GD~~~~~~~~~~~~~ 325 (454)
.|.+.+|+++++|.||+|||++|+.+ ++.. .++.+++++.+ ++.+ ++|+.|+|||+|||+..
T Consensus 254 ---~V~~~dG~~i~~D~Vi~atG~~p~~~-~l~~~~gl~~~~~~~v-~~~~~~~~~t~~p~i~aiGd~~~~--------- 319 (464)
T 2xve_A 254 ---NAYFADGSSEKVDAIILCTGYIHHFP-FLNDDLRLVTNNRLWP-LNLYKGVVWEDNPKFFYIGMQDQW--------- 319 (464)
T ss_dssp ---EEEETTSCEEECSEEEECCCBCCCCT-TBCTTTCCCCCSSSCC-SSEETTTEESSSTTEEECSCSCCS---------
T ss_pred ---EEEECCCCEEeCCEEEECCCCCCCCC-CcCcccccccCCCccc-ccccceEecCCCCCEEEEeCcccc---------
Confidence 37788999999999999999999998 8875 57777655555 4544 56999999999998763
Q ss_pred hccChHHHHHHHHHHHhhhcCCCC
Q psy1545 326 QMRLWTQAKHMGTYAAKCMVGAVK 349 (454)
Q Consensus 326 ~~~~~~~A~~~g~~aa~~i~~~~~ 349 (454)
..++.|..||+++|+++.+...
T Consensus 320 --~~~~~a~~qa~~~a~~l~G~~~ 341 (464)
T 2xve_A 320 --YSFNMFDAQAWYARDVIMGRLP 341 (464)
T ss_dssp --SCHHHHHHHHHHHHHHHTTSSC
T ss_pred --cchHHHHHHHHHHHHHHcCCCC
Confidence 3567899999999999998653
No 78
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=1.3e-33 Score=281.82 Aligned_cols=282 Identities=16% Similarity=0.158 Sum_probs=194.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcceEEEEeC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVDTVAAIDP 81 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~v~~i~~ 81 (454)
+||+|||||+||+++|..|++. |++|+|||+.+.+++.+.+. .+......++.....+.+.+ +++++.+....
T Consensus 123 ~~V~IIGgGpAGl~aA~~L~~~--G~~V~v~e~~~~~GG~l~~g-ip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~--- 196 (456)
T 2vdc_G 123 LSVGVIGAGPAGLAAAEELRAK--GYEVHVYDRYDRMGGLLVYG-IPGFKLEKSVVERRVKLLADAGVIYHPNFEVG--- 196 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--TCCEEEECSSSSCSTHHHHT-SCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT---
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCCCCCeeeec-CCCccCCHHHHHHHHHHHHHCCcEEEeCCEec---
Confidence 6899999999999999999998 89999999998776654431 11111112233334445555 99988764321
Q ss_pred cccEEEeccCcEEEecEEEEecCCC-CCCCCCC-CceeeeeccchHHHHHH---------------HhhcCCeEEEEcCc
Q psy1545 82 RVNCVITEKQNRIKYKTLCICTGAS-PRKIWYS-PHVITIRDTDSVAVLQE---------------KLKSAKKIVVIGNG 144 (454)
Q Consensus 82 ~~~~v~~~~g~~i~~d~lviAtG~~-p~~~~~~-~~~~~~~~~~~~~~l~~---------------~~~~~~~vvVvG~G 144 (454)
+.++++++ .+.||+||||||+. |+.++++ .....+.+..++..... ....+++++|||||
T Consensus 197 --~~v~~~~~-~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG 273 (456)
T 2vdc_G 197 --RDASLPEL-RRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGG 273 (456)
T ss_dssp --TTBCHHHH-HSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSS
T ss_pred --cEEEhhHh-HhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCC
Confidence 22334333 36799999999996 6777776 22112223222222111 01247899999999
Q ss_pred hhHHHHHHHhc--CC-cEEEEEeCCCc-cccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCcccccc
Q psy1545 145 GIATELVHELS--NV-DIVWVVKDKHI-SATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQV 220 (454)
Q Consensus 145 ~~g~e~a~~l~--g~-~V~~i~~~~~~-~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 220 (454)
.+|+|+|..+. |+ +|++++|++.. ++. .. .. ...+
T Consensus 274 ~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~----~~-~e-~~~~----------------------------------- 312 (456)
T 2vdc_G 274 DTAMDCVRTAIRQGATSVKCLYRRDRKNMPG----SQ-RE-VAHA----------------------------------- 312 (456)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSSCSTTCSS----CH-HH-HHHH-----------------------------------
T ss_pred hhHHHHHHHHHHcCCCEEEEEEeCCccCCCC----CH-HH-HHHH-----------------------------------
Confidence 99999998775 77 59999998765 332 11 11 1223
Q ss_pred ccccCccCCceEEEeCceEEEEEcCCCCccceEEE---e----c---------CC--cEEecCEEEEeeccCcCccc-cc
Q psy1545 221 NLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVK---L----T---------NG--HTHACDIVVSAIGVVPNSNI-QV 281 (454)
Q Consensus 221 ~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~---~----~---------~g--~~~~~D~vi~a~G~~p~~~~-~~ 281 (454)
++.||++++++.+.++..++. ...+.+. + . +| .++++|.||+|+|++|+... ++
T Consensus 313 ------~~~Gv~~~~~~~~~~i~~~g~-v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l 385 (456)
T 2vdc_G 313 ------EEEGVEFIWQAAPEGFTGDTV-VTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAF 385 (456)
T ss_dssp ------HHTTCEEECCSSSCCEEEEEE-EETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHH
T ss_pred ------HHCCCEEEeCCCceEEeCCCc-EEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhc
Confidence 237999999988888765321 0011221 1 1 23 47999999999999998752 56
Q ss_pred CCCCceecCCCceEeccc-cccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCC
Q psy1545 282 HGTPFELAPDCGIGVNEL-MQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNE 351 (454)
Q Consensus 282 ~~~~l~~~~~g~i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 351 (454)
+..+++++++|+|.||++ +||+.|+|||+|||+..+ .++..|+.||+.||.+|.+.+.++
T Consensus 386 ~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~----------~~v~~A~~~G~~aA~~i~~~L~~~ 446 (456)
T 2vdc_G 386 DEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGA----------SLVVWAIRDGRDAAEGIHAYAKAK 446 (456)
T ss_dssp HSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSC----------CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCc----------hHHHHHHHHHHHHHHHHHHHhhcC
Confidence 777888888999999997 999999999999998753 578899999999999998766543
No 79
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=100.00 E-value=1.2e-32 Score=275.60 Aligned_cols=317 Identities=15% Similarity=0.161 Sum_probs=195.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcceEEEEe
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVDTVAAID 80 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~v~~i~ 80 (454)
.+||+|||||++|+++|..|++.+++.+|+|||+++.+++.+.+...+......++.....+.+.+ +++++.+...
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v--- 82 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEV--- 82 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCB---
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEE---
Confidence 368999999999999999999985559999999998776554432211111112233333444555 8988765322
Q ss_pred CcccEEEeccCcEEEecEEEEecCCCC-CCCCCC-CceeeeeccchHHHHHHH------h---hcCCeEEEEcCchhHHH
Q psy1545 81 PRVNCVITEKQNRIKYKTLCICTGASP-RKIWYS-PHVITIRDTDSVAVLQEK------L---KSAKKIVVIGNGGIATE 149 (454)
Q Consensus 81 ~~~~~v~~~~g~~i~~d~lviAtG~~p-~~~~~~-~~~~~~~~~~~~~~l~~~------~---~~~~~vvVvG~G~~g~e 149 (454)
.+.|.+++ ..+.||+||+|||+.| +.|+++ .+...+.+..++..+.+. + ..+++++|||+|++|+|
T Consensus 83 --~~~V~~~~-~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e 159 (460)
T 1cjc_A 83 --GRDVTVQE-LQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALD 159 (460)
T ss_dssp --TTTBCHHH-HHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHH
T ss_pred --eeEEEecc-ceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHH
Confidence 12354443 3478999999999995 777777 221122333333322110 0 14799999999999999
Q ss_pred HHHHhc----------------------CC-cEEEEEeCCCccccccCCcchhhhHHHhhcc--CCCChhhhhhhccccc
Q psy1545 150 LVHELS----------------------NV-DIVWVVKDKHISATFLDPGAAEFFQDSINKT--NTAKPETIFKRMRYNT 204 (454)
Q Consensus 150 ~a~~l~----------------------g~-~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~ 204 (454)
+|..|. +. +|+++.|++.+...+..+++.++. .+... ............
T Consensus 160 ~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~--~lp~~~~~~~~~~~~~~~~---- 233 (460)
T 1cjc_A 160 VARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMI--QLPGTRPMLDPADFLGLQD---- 233 (460)
T ss_dssp HHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHH--TCTTEEEECCGGGGTTHHH----
T ss_pred HHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhh--cCCCceeEechhhhcchhh----
Confidence 999875 55 799999988763322111111100 00000 000000000000
Q ss_pred CCCCCCCCCCcccccc-c-cccC--------------ccCCceEEEeCceEEEEEcCCCCc-cceEEEec----------
Q psy1545 205 GGEKGPSLGPDWHTQV-N-LHGS--------------SRDTKITIEYSCEVERIVDSEDDT-CNAYVKLT---------- 257 (454)
Q Consensus 205 ~~~~~~~l~~~~~~~~-~-~~~~--------------l~~~gv~i~~~~~v~~i~~~~~~~-~~~~v~~~---------- 257 (454)
....+ +...+++ . +.+. ....||++++++.+.++..+++ + ....+++.
T Consensus 234 ---~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~-~~~v~~v~~~~~~l~~~~~~ 308 (460)
T 1cjc_A 234 ---RIKEA-ARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPD-GRRAAGIRLAVTRLEGIGEA 308 (460)
T ss_dssp ---HTTTS-CHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTT-SSSEEEEEEEEEEEESSGGG
T ss_pred ---hhhhc-cHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCC-CceEEEEEEEEEEEccccCC
Confidence 00000 0000000 0 0001 1227999999999999986531 1 12233332
Q ss_pred -----CC--cEEecCEEEEeeccCcCcccccCCCCc-eecCCCceEeccccccc-cCceeecCcccccCCccccchhhcc
Q psy1545 258 -----NG--HTHACDIVVSAIGVVPNSNIQVHGTPF-ELAPDCGIGVNELMQTS-ISNVYAAGDVCTPSWDLAKQWFQMR 328 (454)
Q Consensus 258 -----~g--~~~~~D~vi~a~G~~p~~~~~~~~~~l-~~~~~g~i~vd~~~~t~-~~~Iya~GD~~~~~~~~~~~~~~~~ 328 (454)
+| ++++||.|++|+|++|+. + .++ +++++|+|.||+++||+ .|+|||+|||+..+ ..
T Consensus 309 ~~~~~~g~~~~i~~d~Vi~a~G~~p~~--l---~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~---------~~ 374 (460)
T 1cjc_A 309 TRAVPTGDVEDLPCGLVLSSIGYKSRP--I---DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGP---------TG 374 (460)
T ss_dssp CEEEEEEEEEEEECSEEEECCCEECCC--C---CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCT---------TC
T ss_pred CcccCCCceEEEEcCEEEECCCCCCCC--C---CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCC---------Cc
Confidence 34 579999999999999986 4 467 77888999999999998 79999999999643 23
Q ss_pred ChHHHHHHHHHHHhhhcCCCC
Q psy1545 329 LWTQAKHMGTYAAKCMVGAVK 349 (454)
Q Consensus 329 ~~~~A~~~g~~aa~~i~~~~~ 349 (454)
.+..|+.+|+.+|.||++.+.
T Consensus 375 ~i~~a~~~g~~aa~~i~~~l~ 395 (460)
T 1cjc_A 375 VITTTMTDSFLTGQILLQDLK 395 (460)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHH
Confidence 466899999999999987654
No 80
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.98 E-value=3e-32 Score=272.39 Aligned_cols=312 Identities=13% Similarity=0.115 Sum_probs=196.4
Q ss_pred CcccEEEECCCHHHHHHHHHHhh-cCC----CCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAF-LHP----GESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD 74 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~-~~~----g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~ 74 (454)
..+||+|||||+||++||..|++ ..+ +.+|+|||+.+.+++.+.+...+......++.....+.+.+ +++++.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~ 81 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGN 81 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEES
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEee
Confidence 04799999999999999999998 644 78999999998766554432222211222333333444555 8888765
Q ss_pred eEEEEeCcccEEEeccCcEEEecEEEEecCCC-CCCCCCC-CceeeeeccchHHHHHH-------Hh--hcCCeEEEEcC
Q psy1545 75 TVAAIDPRVNCVITEKQNRIKYKTLCICTGAS-PRKIWYS-PHVITIRDTDSVAVLQE-------KL--KSAKKIVVIGN 143 (454)
Q Consensus 75 ~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~-p~~~~~~-~~~~~~~~~~~~~~l~~-------~~--~~~~~vvVvG~ 143 (454)
. . ++ +.|.++++ .+.||+||+|||+. |+.++++ .....+.+..++....+ .+ ..+++++|||+
T Consensus 82 v-~-v~---~~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~ 155 (456)
T 1lqt_A 82 V-V-VG---EHVQPGEL-SERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGN 155 (456)
T ss_dssp C-C-BT---TTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECC
T ss_pred E-E-EC---CEEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECC
Confidence 2 1 22 34555555 47899999999997 6777776 22222333333322111 01 14789999999
Q ss_pred chhHHHHHHHhc----------------------C-CcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhc
Q psy1545 144 GGIATELVHELS----------------------N-VDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRM 200 (454)
Q Consensus 144 G~~g~e~a~~l~----------------------g-~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~ 200 (454)
|++|+|+|..|. + .+|+++.|+..+...+..+++.+ +... + ..
T Consensus 156 G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elre-----l~~l--p-------~~ 221 (456)
T 1lqt_A 156 GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRE-----LADL--D-------GV 221 (456)
T ss_dssp SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHH-----GGGC--T-------TE
T ss_pred CHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHH-----hhcC--C-------Cc
Confidence 999999999875 2 48999999887655321111100 0000 0 00
Q ss_pred cccc-CCCCCCCCC------Cccccc-c-ccccCccC------CceEEEeCceEEEEEcCCCCccceEEEec--------
Q psy1545 201 RYNT-GGEKGPSLG------PDWHTQ-V-NLHGSSRD------TKITIEYSCEVERIVDSEDDTCNAYVKLT-------- 257 (454)
Q Consensus 201 ~~~~-~~~~~~~l~------~~~~~~-~-~~~~~l~~------~gv~i~~~~~v~~i~~~~~~~~~~~v~~~-------- 257 (454)
.+.. .+.+..... +...++ . .+.+.+++ +||++++++.+.++..++. ...+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~---v~~v~~~~~~~~~~~ 298 (456)
T 1lqt_A 222 DVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRK---VERIVLGRNELVSDG 298 (456)
T ss_dssp EEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSS---CCEEEEEEEEEEECS
T ss_pred eeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCc---EeEEEEEEEEecCCC
Confidence 0000 000000000 000000 0 00111122 7999999999999987532 2224332
Q ss_pred --------CC--cEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccc-cccCceeecCcccccCCccccchhh
Q psy1545 258 --------NG--HTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQ-TSISNVYAAGDVCTPSWDLAKQWFQ 326 (454)
Q Consensus 258 --------~g--~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~-t~~~~Iya~GD~~~~~~~~~~~~~~ 326 (454)
+| ++++||.|++|+|++|+. + .++.++++|++.+|+++| |+.|+|||+|||+..+
T Consensus 299 ~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~--l---~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp--------- 364 (456)
T 1lqt_A 299 SGRVAAKDTGEREELPAQLVVRSVGYRGVP--T---PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGP--------- 364 (456)
T ss_dssp SSSEEEEEEEEEEEEECSEEEECSCEECCC--C---TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCS---------
T ss_pred cccccccCCCceEEEEcCEEEEccccccCC--C---CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCC---------
Confidence 34 569999999999999987 3 357778889999999999 8999999999998754
Q ss_pred ccChHHHHHHHHHHHhhhcCCCC
Q psy1545 327 MRLWTQAKHMGTYAAKCMVGAVK 349 (454)
Q Consensus 327 ~~~~~~A~~~g~~aa~~i~~~~~ 349 (454)
...+..|+.+|+.+|.+|++.+.
T Consensus 365 ~~~i~~a~~~g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 365 TGVIGTNKKDAQDTVDTLIKNLG 387 (456)
T ss_dssp CSCTTHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHH
Confidence 23455799999999999987653
No 81
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.97 E-value=2.7e-32 Score=297.36 Aligned_cols=279 Identities=17% Similarity=0.174 Sum_probs=193.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcceEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVDTVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~v~~i~ 80 (454)
+||+|||||+||++||..|++. |+ +|+|+|+++.+++...+. .+......+......+.+.+ +++++.+.....
T Consensus 188 ~~VvVIGgGpAGl~aA~~L~~~--G~~~Vtv~E~~~~~GG~~~~~-ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~- 263 (1025)
T 1gte_A 188 AKIALLGAGPASISCASFLARL--GYSDITIFEKQEYVGGLSTSE-IPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE- 263 (1025)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSSCSTHHHHT-SCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST-
T ss_pred CEEEEECccHHHHHHHHHHHhc--CCCcEEEEeCCCCCCcccccc-CCcccCCHHHHHHHHHHHHHCCcEEEcccEecc-
Confidence 5899999999999999999998 77 799999988766543221 11111111223333455666 999887644321
Q ss_pred CcccEEEeccCcEEEecEEEEecCC-CCCCCCCC---CceeeeeccchHHHHHHH-------------hhcCCeEEEEcC
Q psy1545 81 PRVNCVITEKQNRIKYKTLCICTGA-SPRKIWYS---PHVITIRDTDSVAVLQEK-------------LKSAKKIVVIGN 143 (454)
Q Consensus 81 ~~~~~v~~~~g~~i~~d~lviAtG~-~p~~~~~~---~~~~~~~~~~~~~~l~~~-------------~~~~~~vvVvG~ 143 (454)
+.++++++..+.||+||||||+ +|+.++++ +....+.+..++.+..+. ...+++++||||
T Consensus 264 ---~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGg 340 (1025)
T 1gte_A 264 ---NEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGA 340 (1025)
T ss_dssp ---TSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECS
T ss_pred ---ceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECC
Confidence 2355555556789999999999 48766542 111223444454432211 113679999999
Q ss_pred chhHHHHHHHhc--CC-cEEEEEeCCC-ccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccc
Q psy1545 144 GGIATELVHELS--NV-DIVWVVKDKH-ISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQ 219 (454)
Q Consensus 144 G~~g~e~a~~l~--g~-~V~~i~~~~~-~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 219 (454)
|++|+|+|..+. |+ +||+++|+++ .++. ++.+ + ..+
T Consensus 341 G~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~-~~~e----~-~~~---------------------------------- 380 (1025)
T 1gte_A 341 GDTAFDCATSALRCGARRVFLVFRKGFVNIRA-VPEE----V-ELA---------------------------------- 380 (1025)
T ss_dssp SHHHHHHHHHHHHTTCSEEEEECSSCGGGCCS-CHHH----H-HHH----------------------------------
T ss_pred ChHHHHHHHHHHHcCCCEEEEEEecChhhCCC-CHHH----H-HHH----------------------------------
Confidence 999999999886 76 8999998873 3331 1221 1 222
Q ss_pred cccccCccCCceEEEeCceEEEEEcCCCCccceEEEec------CC---------cEEecCEEEEeeccCcC-cccccCC
Q psy1545 220 VNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT------NG---------HTHACDIVVSAIGVVPN-SNIQVHG 283 (454)
Q Consensus 220 ~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~------~g---------~~~~~D~vi~a~G~~p~-~~~~~~~ 283 (454)
++.||++++++.+.++..++ +....+++. +| .++++|.||+|+|++|+ .. ++..
T Consensus 381 -------~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~-l~~~ 450 (1025)
T 1gte_A 381 -------KEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPK-VKEA 450 (1025)
T ss_dssp -------HHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHH-HHHH
T ss_pred -------HHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchh-hhhc
Confidence 23799999999999887533 222333332 22 47899999999999875 44 5544
Q ss_pred -CCceecCCCceEecc-ccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCC
Q psy1545 284 -TPFELAPDCGIGVNE-LMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAV 348 (454)
Q Consensus 284 -~~l~~~~~g~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (454)
.|++++++|+|.||+ ++||+.|+|||+|||+..+ .+++.|+.||+.||.+|.+.+
T Consensus 451 ~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~----------~~~~~A~~~G~~aA~~i~~~L 507 (1025)
T 1gte_A 451 LSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMA----------NTTVESVNDGKQASWYIHKYI 507 (1025)
T ss_dssp TTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSC----------CCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCc----------hHHHHHHHHHHHHHHHHHHHH
Confidence 578888899999997 8999999999999998743 477889999999999998643
No 82
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=2.2e-30 Score=280.55 Aligned_cols=275 Identities=16% Similarity=0.151 Sum_probs=194.6
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccc--ccccccccchhhhHHHHHhc--CcEEEcc-eE
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVP--VTKLLSDITVEETDANKFEG--LCTVIVD-TV 76 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~i~~~~~-~v 76 (454)
++||+|||||+||++||..|++. |++|+|||+++.+++.+.... ........++.....+.+.+ +++++.+ +|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~--G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V 205 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRS--GARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTV 205 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 47899999999999999999998 899999999877654333210 00111122333333344443 7888755 78
Q ss_pred EEEeCcccEEEe-----------------ccCcEEEecEEEEecCCCCCCCCCC-CceeeeeccchHHHHHHH--hhcCC
Q psy1545 77 AAIDPRVNCVIT-----------------EKQNRIKYKTLCICTGASPRKIWYS-PHVITIRDTDSVAVLQEK--LKSAK 136 (454)
Q Consensus 77 ~~i~~~~~~v~~-----------------~~g~~i~~d~lviAtG~~p~~~~~~-~~~~~~~~~~~~~~l~~~--~~~~~ 136 (454)
..++.......+ .++..+.||+||||||++|+.|+++ .....+.+..++..+.+. ..+++
T Consensus 206 ~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk 285 (965)
T 2gag_A 206 FGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGA 285 (965)
T ss_dssp EEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCS
T ss_pred EeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCC
Confidence 877755321111 1123789999999999999888877 111222233333333221 12358
Q ss_pred eEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCC
Q psy1545 137 KIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGP 214 (454)
Q Consensus 137 ~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 214 (454)
+++|||+|++|+|+|..|. |.+|+++++++++++. .+.+.
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~~----------~~~l~---------------------------- 327 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAATGGVVAVIDARSSISAA----------AAQAV---------------------------- 327 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCHH----------HHHHH----------------------------
T ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccchh----------HHHHH----------------------------
Confidence 9999999999999999986 8999999998876431 33343
Q ss_pred ccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecC-------C--cEEecCEEEEeeccCcCcccccCCCC
Q psy1545 215 DWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTN-------G--HTHACDIVVSAIGVVPNSNIQVHGTP 285 (454)
Q Consensus 215 ~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~-------g--~~~~~D~vi~a~G~~p~~~~~~~~~~ 285 (454)
+.||++++++.+.++..+++ +....+.+.+ | +++++|.|++|+|++|+.+ ++..
T Consensus 328 -------------~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~-l~~~-- 390 (965)
T 2gag_A 328 -------------ADGVQVISGSVVVDTEADEN-GELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVH-LHSQ-- 390 (965)
T ss_dssp -------------HTTCCEEETEEEEEEEECTT-SCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCH-HHHH--
T ss_pred -------------hCCeEEEeCCEeEEEeccCC-CCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChH-HHHh--
Confidence 38999999999999987311 1233455543 5 6799999999999999998 6543
Q ss_pred ceecCCCceEeccccc-----cccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCC
Q psy1545 286 FELAPDCGIGVNELMQ-----TSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAV 348 (454)
Q Consensus 286 l~~~~~g~i~vd~~~~-----t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (454)
..++|.+|++++ |+.|+|||+|||++.+ . ...|..||+.||.+|++.+
T Consensus 391 ----~~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~----------~-l~~A~~~G~~aA~~i~~~l 443 (965)
T 2gag_A 391 ----RQGKLDWDTTIHAFVPADAVANQHLAGAMTGRL----------D-TASALSTGAATGAAAATAA 443 (965)
T ss_dssp ----TTCCEEEETTTTEEEECSCCTTEEECGGGGTCC----------S-HHHHHHHHHHHHHHHHHHT
T ss_pred ----CCCcEEEcCcccccccCCCCCCEEEEEecCCch----------h-HHHHHHHHHHHHHHHHHHc
Confidence 257899999887 8999999999999743 2 2379999999999998654
No 83
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=1.7e-29 Score=252.96 Aligned_cols=264 Identities=15% Similarity=0.163 Sum_probs=187.3
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCC--eEEEECCCCcccccccccccc-----------------------------c
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGE--SIGLVTPSGIVKAVTKTVPVT-----------------------------K 50 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~--~v~lie~~~~~~~~~~~~~~~-----------------------------~ 50 (454)
.+||+|||||++|+++|..|++. |. +|+|+|+++..++.+.+.... .
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~--G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAE--KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhc--CCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 47999999999999999999998 77 999999987665544432100 0
Q ss_pred c--------------ccc---------c---chhhhHHHHHhc--CcEEE-cceEEEEeCccc--EEEecc---Cc---E
Q psy1545 51 L--------------LSD---------I---TVEETDANKFEG--LCTVI-VDTVAAIDPRVN--CVITEK---QN---R 93 (454)
Q Consensus 51 ~--------------~~~---------~---~~~~~~~~~~~~--~i~~~-~~~v~~i~~~~~--~v~~~~---g~---~ 93 (454)
. +.. + .....++..+.. +..++ ..+|+.++.... .|++.+ |+ +
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~ 163 (447)
T 2gv8_A 84 LYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISK 163 (447)
T ss_dssp CCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEE
T ss_pred hhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEE
Confidence 0 000 0 000112222222 44443 558888876543 566655 66 7
Q ss_pred EEecEEEEecCC--CCCCCCCCC----------ceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCc-
Q psy1545 94 IKYKTLCICTGA--SPRKIWYSP----------HVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVD- 158 (454)
Q Consensus 94 i~~d~lviAtG~--~p~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~- 158 (454)
+.||+||+|||. .|+.|++++ .+++.+...+...+ .+++|+|||+|.+|+|+|..|+ +.+
T Consensus 164 ~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~-----~~k~VvVvG~G~sg~e~A~~l~~~~~~~ 238 (447)
T 2gv8_A 164 DIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELF-----VGESVLVVGGASSANDLVRHLTPVAKHP 238 (447)
T ss_dssp EEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGG-----TTCCEEEECSSHHHHHHHHHHTTTSCSS
T ss_pred EEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhc-----CCCEEEEEccCcCHHHHHHHHHHHhCCc
Confidence 999999999998 788887761 13333333333322 3899999999999999999997 888
Q ss_pred EEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCce
Q psy1545 159 IVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCE 238 (454)
Q Consensus 159 V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~ 238 (454)
|++++|++.+ + +..||++ +..
T Consensus 239 V~l~~r~~~~----------------l-----------------------------------------~~~~i~~--~~~ 259 (447)
T 2gv8_A 239 IYQSLLGGGD----------------I-----------------------------------------QNESLQQ--VPE 259 (447)
T ss_dssp EEEECTTCCS----------------C-----------------------------------------BCSSEEE--ECC
T ss_pred EEEEeCCCCc----------------C-----------------------------------------CCCCeEE--ecC
Confidence 9999887643 1 1257764 467
Q ss_pred EEEEEcCCCCccceEEEecCCcE-EecCEEEEeeccCcCcccc-----cCCCCceecCCCceEeccccc---cccCceee
Q psy1545 239 VERIVDSEDDTCNAYVKLTNGHT-HACDIVVSAIGVVPNSNIQ-----VHGTPFELAPDCGIGVNELMQ---TSISNVYA 309 (454)
Q Consensus 239 v~~i~~~~~~~~~~~v~~~~g~~-~~~D~vi~a~G~~p~~~~~-----~~~~~l~~~~~g~i~vd~~~~---t~~~~Iya 309 (454)
|+++..++ ..|.++||++ +++|.||+|||++|+.+ + ++..+..+..++.+.++.+.+ ++.|+||+
T Consensus 260 v~~~~~~~-----~~v~~~dG~~~~~~D~vi~atG~~~~~~-~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~ 333 (447)
T 2gv8_A 260 ITKFDPTT-----REIYLKGGKVLSNIDRVIYCTGYLYSVP-FPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAF 333 (447)
T ss_dssp EEEEETTT-----TEEEETTTEEECCCSEEEECCCBCCCCC-CHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEE
T ss_pred eEEEecCC-----CEEEECCCCEeccCCEEEECCCCCcCCC-CCcccccccccCceecCCCcccccccccccCCCCcEEE
Confidence 88887543 2578889976 79999999999999998 8 765432333356677777766 78999999
Q ss_pred cCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCC
Q psy1545 310 AGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAV 348 (454)
Q Consensus 310 ~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (454)
+||+... .+++.|..||+++|++|.+..
T Consensus 334 ~G~~~~~-----------~~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 334 VGLALHV-----------VPFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp SSCCBSS-----------CHHHHHHHHHHHHHHHHTTSS
T ss_pred Eeccccc-----------cCchHHHHHHHHHHHHHcCCC
Confidence 9999753 256789999999999999864
No 84
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=3e-30 Score=259.91 Aligned_cols=333 Identities=14% Similarity=0.073 Sum_probs=193.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCC---CeEEEECCCCccccccccc--c--c-------------ccc-c---------
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPG---ESIGLVTPSGIVKAVTKTV--P--V-------------TKL-L--------- 52 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g---~~v~lie~~~~~~~~~~~~--~--~-------------~~~-~--------- 52 (454)
+||+|||||++|+++|..|++.++. .+|+|||+++.+++..... . . +.. +
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~ 110 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKH 110 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHT
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhc
Confidence 5999999999999999999998211 8999999998765322110 0 0 000 0
Q ss_pred -------------cccchhhhHHHHHhc--CcEEEcc-eEEEEeCc---cc----EEEeccCc----EEEecEEEEecCC
Q psy1545 53 -------------SDITVEETDANKFEG--LCTVIVD-TVAAIDPR---VN----CVITEKQN----RIKYKTLCICTGA 105 (454)
Q Consensus 53 -------------~~~~~~~~~~~~~~~--~i~~~~~-~v~~i~~~---~~----~v~~~~g~----~i~~d~lviAtG~ 105 (454)
........+..++.+ ++.+..+ +|+.++.. .. .|.+.++. ++.||+||+|||+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 111 DRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp TCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred CceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 000000122223333 6677654 78888765 33 56666665 8999999999999
Q ss_pred CCCCCCCC---Cce-eeeeccchHH---HHHHHhhcCCeEEEEcCchhHHHHHHHhc----CCcEEEEEeCCCccccccC
Q psy1545 106 SPRKIWYS---PHV-ITIRDTDSVA---VLQEKLKSAKKIVVIGNGGIATELVHELS----NVDIVWVVKDKHISATFLD 174 (454)
Q Consensus 106 ~p~~~~~~---~~~-~~~~~~~~~~---~l~~~~~~~~~vvVvG~G~~g~e~a~~l~----g~~V~~i~~~~~~~~~~~d 174 (454)
.|+.|+.. ... ..+++.+... .+......+++++|||+|.+|+|+|..|. +.+|++++|++.+++....
T Consensus 191 ~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~ 270 (463)
T 3s5w_A 191 TPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDS 270 (463)
T ss_dssp EECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCC
T ss_pred CCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCC
Confidence 98877632 121 1222222222 12111124899999999999999999885 7899999999987663111
Q ss_pred Ccchhhh----HHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCcc
Q psy1545 175 PGAAEFF----QDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTC 250 (454)
Q Consensus 175 ~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~ 250 (454)
+-..+.+ ...+..........+.....-.....+...+.+.+...++......+.||++++++.|++++.+++
T Consensus 271 ~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~--- 347 (463)
T 3s5w_A 271 PFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQ--- 347 (463)
T ss_dssp HHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETT---
T ss_pred ccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCC---
Confidence 1000000 000000000000001111111011111111112222222222222347999999999999987653
Q ss_pred ceEEEec---CCc--EEecCEEEEeeccCcC--cccccCCCCceecCCCceEeccccccc-----cCceeecCcccccCC
Q psy1545 251 NAYVKLT---NGH--THACDIVVSAIGVVPN--SNIQVHGTPFELAPDCGIGVNELMQTS-----ISNVYAAGDVCTPSW 318 (454)
Q Consensus 251 ~~~v~~~---~g~--~~~~D~vi~a~G~~p~--~~~~~~~~~l~~~~~g~i~vd~~~~t~-----~~~Iya~GD~~~~~~ 318 (454)
.+.+.+. +|+ ++++|.||+|||++|+ .+ ++......+ |++.||+++|+. .|+|||+|||.....
T Consensus 348 ~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~-~l~~l~~~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g 423 (463)
T 3s5w_A 348 GIELALRDAGSGELSVETYDAVILATGYERQLHRQ-LLEPLAEYL---GDHEIGRDYRLQTDERCKVAIYAQGFSQASHG 423 (463)
T ss_dssp EEEEEEEETTTCCEEEEEESEEEECCCEECCC-CT-TTGGGGGGB---C--CCCTTSBCCBCTTBCSEEEESSCCHHHHC
T ss_pred EEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccc-hhHHHHHHh---CCcccCcccccccCCCCCCeEEEcCCCcccCC
Confidence 4666665 664 4999999999999999 44 555433222 889999999954 467999999986321
Q ss_pred ccccchhhccChHHHHHHHHHHHhhhcCC
Q psy1545 319 DLAKQWFQMRLWTQAKHMGTYAAKCMVGA 347 (454)
Q Consensus 319 ~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 347 (454)
.. .+.+...|.+++++++..+...
T Consensus 424 ~~-----~~~l~~~a~r~~~i~~~~~~~~ 447 (463)
T 3s5w_A 424 LS-----DTLLSVLPVRAEEISGSLYQHL 447 (463)
T ss_dssp TT-----TTSSTTHHHHHHHHHHHHHHHH
T ss_pred cC-----ccchhHHHHHHHHHHHHHHhhc
Confidence 11 1245667888888887766554
No 85
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.97 E-value=8.4e-30 Score=257.76 Aligned_cols=253 Identities=16% Similarity=0.166 Sum_probs=186.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccc-cccc--ccchhhhHHHHHhc-CcEEEc-ceE
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVT-KLLS--DITVEETDANKFEG-LCTVIV-DTV 76 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~-~i~~~~-~~v 76 (454)
++||+|||||++|+++|..|++. .+|+|||+++.+++........ ..+. ..++.....+.+ . +++++. .++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~---~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v 183 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY---LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSA 183 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT---CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc---CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEE
Confidence 46999999999999999999986 7999999998776543321110 0011 111222222333 4 888764 477
Q ss_pred EEEeCcccEEEe---ccCc--EEEecEEEEecCCCCCCCCCC-CceeeeeccchHHHHHHHh--hcCCeEEEEcCchhHH
Q psy1545 77 AAIDPRVNCVIT---EKQN--RIKYKTLCICTGASPRKIWYS-PHVITIRDTDSVAVLQEKL--KSAKKIVVIGNGGIAT 148 (454)
Q Consensus 77 ~~i~~~~~~v~~---~~g~--~i~~d~lviAtG~~p~~~~~~-~~~~~~~~~~~~~~l~~~~--~~~~~vvVvG~G~~g~ 148 (454)
..++.+.+.+.+ .+++ .+.||+||+|||+.|+.|+++ .+...+.+..++..+.+.. .++++++|+|+|++|+
T Consensus 184 ~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gl 263 (493)
T 1y56_A 184 LGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEV 263 (493)
T ss_dssp CCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTSTTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHH
T ss_pred EEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCCCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHH
Confidence 777766553322 3443 689999999999999888877 2222233445555554432 2468999999999998
Q ss_pred HHHHHhcCCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccC
Q psy1545 149 ELVHELSNVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRD 228 (454)
Q Consensus 149 e~a~~l~g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 228 (454)
| +.+ ++
T Consensus 264 e---------------------------------~~l-----------------------------------------~~ 269 (493)
T 1y56_A 264 I---------------------------------QEL-----------------------------------------ER 269 (493)
T ss_dssp H---------------------------------HHH-----------------------------------------HH
T ss_pred H---------------------------------HHH-----------------------------------------Hh
Confidence 7 112 22
Q ss_pred CceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCcee--cCCCceE-eccccccccC
Q psy1545 229 TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFEL--APDCGIG-VNELMQTSIS 305 (454)
Q Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~--~~~g~i~-vd~~~~t~~~ 305 (454)
.||++++++.+.++..++. ...+.+++|+++++|.|++|+|++|+.+ +++..|+++ +++|+|. ||+++| +.|
T Consensus 270 ~GV~v~~~~~v~~i~~~~~---v~~v~~~~g~~i~aD~Vv~a~G~~p~~~-l~~~~g~~~~~~~~g~i~~vd~~~~-s~~ 344 (493)
T 1y56_A 270 WGIDYVHIPNVKRVEGNEK---VERVIDMNNHEYKVDALIFADGRRPDIN-PITQAGGKLRFRRGYYSPVLDEYHR-IKD 344 (493)
T ss_dssp HTCEEEECSSEEEEECSSS---CCEEEETTCCEEECSEEEECCCEEECCH-HHHHTTCCEEEETTEEEECCCTTSE-EET
T ss_pred CCcEEEeCCeeEEEecCCc---eEEEEeCCCeEEEeCEEEECCCcCcCch-HHHhcCCCccccCCceeeccccccC-cCC
Confidence 7999999999999987642 4567788899999999999999999998 887777654 5688887 899999 999
Q ss_pred ceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCC
Q psy1545 306 NVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAV 348 (454)
Q Consensus 306 ~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (454)
+|||+|||+.. +++..|..||+.||.||.+.+
T Consensus 345 ~vya~GD~~~~-----------~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 345 GIYVAGSAVSI-----------KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp TEEECSTTTCC-----------CCHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEeccCCc-----------cCHHHHHHHHHHHHHHHHHHc
Confidence 99999999873 467789999999999998754
No 86
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.96 E-value=5.7e-30 Score=269.17 Aligned_cols=269 Identities=15% Similarity=0.150 Sum_probs=191.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccccccccc-chhhhHHHHHhc--CcEEEcceEEE
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDI-TVEETDANKFEG--LCTVIVDTVAA 78 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~i~~~~~~v~~ 78 (454)
++||+|||||+||++||..|+++ |++|+|||+++..++.+............ .+.......+.+ +++++.++
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~--G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~--- 465 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR--GYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRES--- 465 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSC---
T ss_pred cceEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECC---
Confidence 36899999999999999999999 99999999998776554432211111111 122222233333 67766542
Q ss_pred EeCcccEEEeccCcEEEecEEEEecCCCCC--------CCCCC-CceeeeeccchHHHHHHHhhcCCeEEEEc--CchhH
Q psy1545 79 IDPRVNCVITEKQNRIKYKTLCICTGASPR--------KIWYS-PHVITIRDTDSVAVLQEKLKSAKKIVVIG--NGGIA 147 (454)
Q Consensus 79 i~~~~~~v~~~~g~~i~~d~lviAtG~~p~--------~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~vvVvG--~G~~g 147 (454)
.+...++..+.||+||+|||+.|+ .|+++ .....+.+..++... ....+++++||| +|.+|
T Consensus 466 ------~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~--~~~~g~~VvViG~ggG~~g 537 (690)
T 3k30_A 466 ------PMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAG--RLPDGKKVVVYDDDHYYLG 537 (690)
T ss_dssp ------CCCHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTT--CCCSSSEEEEEECSCSSHH
T ss_pred ------eecHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCC--CCCCCCEEEEEcCCCCccH
Confidence 133334456889999999999844 55665 211223343333322 233578899999 99999
Q ss_pred HHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccC
Q psy1545 148 TELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGS 225 (454)
Q Consensus 148 ~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 225 (454)
+|+|..|. |.+|+++++.+.+++...++.....+.+.+.+
T Consensus 538 ~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~-------------------------------------- 579 (690)
T 3k30_A 538 GVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIE-------------------------------------- 579 (690)
T ss_dssp HHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHH--------------------------------------
T ss_pred HHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHH--------------------------------------
Confidence 99999996 99999999999887754446666666666654
Q ss_pred ccCCceEEEeCceEEEEEcCCCCccceEEEe---cCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEecccccc
Q psy1545 226 SRDTKITIEYSCEVERIVDSEDDTCNAYVKL---TNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQT 302 (454)
Q Consensus 226 l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~---~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t 302 (454)
.||++++++.|++++.++ ..+.. .+++++++|.||+|+|++|+.+ ++...+ ..+. +|
T Consensus 580 ---~GV~i~~~~~V~~i~~~~-----~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~-l~~~l~----~~~~-------~t 639 (690)
T 3k30_A 580 ---NGVARVTDHAVVAVGAGG-----VTVRDTYASIERELECDAVVMVTARLPREE-LYLDLV----ARRD-------AG 639 (690)
T ss_dssp ---TTCEEEESEEEEEEETTE-----EEEEETTTCCEEEEECSEEEEESCEEECCH-HHHHHH----HHHH-------HT
T ss_pred ---CCCEEEcCcEEEEEECCe-----EEEEEccCCeEEEEECCEEEECCCCCCChH-HHHHHh----hhhc-------cc
Confidence 899999999999998754 23332 2456899999999999999997 654321 1121 89
Q ss_pred ccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCCc
Q psy1545 303 SISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNEP 352 (454)
Q Consensus 303 ~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~ 352 (454)
+.|+|||+|||+.. +.+..|+.||+.||.||.+.+.+++
T Consensus 640 ~~~~VyaiGD~~~~-----------~~~~~A~~~g~~aa~~i~~~l~g~~ 678 (690)
T 3k30_A 640 EIASVRGIGDAWAP-----------GTIAAAVWSGRRAAEEFDAVLPSND 678 (690)
T ss_dssp SCSEEEECGGGTSC-----------BCHHHHHHHHHHHHHHTTCCCCCTT
T ss_pred CCCCEEEEeCCCch-----------hhHHHHHHHHHHHHHHHHhhccCCC
Confidence 99999999999873 3556699999999999999876653
No 87
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.96 E-value=3.1e-30 Score=272.24 Aligned_cols=272 Identities=16% Similarity=0.134 Sum_probs=184.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccch----hhhHHHHHhcCcEEEcceEE
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITV----EETDANKFEGLCTVIVDTVA 77 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~v~ 77 (454)
++||+|||||+||++||..|++. |++|+|||+++.+++.+.+.........+.. .....+.+.. ....+.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~--G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~----~~~~~v 462 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMES--GYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLK----KNKESQ 462 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHH----HSTTCE
T ss_pred CceEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhc----ccCCce
Confidence 36899999999999999999998 8999999999877654443221111111111 1111111110 000112
Q ss_pred EEeCcccEEEeccCcEEEecEEEEecCCC--------CCCCCCC-Cc--eeeeeccchHHHHHHHhhcCCeEEEEc--Cc
Q psy1545 78 AIDPRVNCVITEKQNRIKYKTLCICTGAS--------PRKIWYS-PH--VITIRDTDSVAVLQEKLKSAKKIVVIG--NG 144 (454)
Q Consensus 78 ~i~~~~~~v~~~~g~~i~~d~lviAtG~~--------p~~~~~~-~~--~~~~~~~~~~~~l~~~~~~~~~vvVvG--~G 144 (454)
.+.. ++.++++++..+.||+||||||+. |+.|+++ .. ...+.+..++.. .....+++++||| ||
T Consensus 463 ~i~~-~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~--~~~~~gk~VvVIG~GgG 539 (729)
T 1o94_A 463 LALG-QKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMD--GKKKIGKRVVILNADTY 539 (729)
T ss_dssp EECS-CCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHH--CCSCCCSEEEEEECCCS
T ss_pred EEEe-CeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhc--CCCCCCCeEEEEcCCCC
Confidence 2222 233555455568899999999998 4556665 11 112334444432 2233478999999 99
Q ss_pred hhHHHHHHHhc--CCcEEEEEeCCCcccc-ccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccc
Q psy1545 145 GIATELVHELS--NVDIVWVVKDKHISAT-FLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVN 221 (454)
Q Consensus 145 ~~g~e~a~~l~--g~~V~~i~~~~~~~~~-~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 221 (454)
.+|+|+|..|. |.+||++++.+ +.+. .++.. ...+.+.+.+
T Consensus 540 ~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~---------------------------------- 583 (729)
T 1o94_A 540 FMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHE---------------------------------- 583 (729)
T ss_dssp SHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHH----------------------------------
T ss_pred chHHHHHHHHHHcCCEEEEEeccc-cccccccccc-HHHHHHHHHh----------------------------------
Confidence 99999999986 99999999988 6542 13333 3444454533
Q ss_pred cccCccCCceEEEeCceEEEEEcCCCCccceEEEe--cCC-cE------------------EecCEEEEeeccCcCcccc
Q psy1545 222 LHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL--TNG-HT------------------HACDIVVSAIGVVPNSNIQ 280 (454)
Q Consensus 222 ~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~--~~g-~~------------------~~~D~vi~a~G~~p~~~~~ 280 (454)
.||++++++.++++..++ +.+.. .++ ++ +++|.||+|+|++|+.+ +
T Consensus 584 -------~GV~i~~~~~v~~i~~~~-----v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~-l 650 (729)
T 1o94_A 584 -------LHVEELGDHFCSRIEPGR-----MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECT-L 650 (729)
T ss_dssp -------TTCEEECSEEEEEEETTE-----EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCH-H
T ss_pred -------CCCEEEcCcEEEEEECCe-----EEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChH-H
Confidence 899999999999998643 23332 233 32 99999999999999987 6
Q ss_pred cCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCC
Q psy1545 281 VHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKN 350 (454)
Q Consensus 281 ~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 350 (454)
+... . ..+|+++||+.|+|||+|||+.. +.+..|+.||+.||.+|.+.+.+
T Consensus 651 ~~~l--~------~~vd~~~~t~~~~VyAiGD~~~~-----------~~~~~A~~~G~~aA~~i~~~l~~ 701 (729)
T 1o94_A 651 WNEL--K------ARESEWAENDIKGIYLIGDAEAP-----------RLIADATFTGHRVAREIEEANPQ 701 (729)
T ss_dssp HHHH--H------HTGGGTGGGTCCEEEECGGGTSC-----------CCHHHHHHHHHHHHHTTTSSCTT
T ss_pred HHHH--h------hhcccccccCCCCeEEEeCccch-----------hhHHHHHHHHHHHHHHhhhhccc
Confidence 5422 1 13689999999999999999862 35678999999999999986543
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.95 E-value=5e-27 Score=239.15 Aligned_cols=320 Identities=13% Similarity=0.063 Sum_probs=198.9
Q ss_pred cccEEEECCCHHHHHHHHHHh-hcCCCCeEEEECCCCcccccccccccccc---c-----------------------cc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLA-FLHPGESIGLVTPSGIVKAVTKTVPVTKL---L-----------------------SD 54 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~-~~~~g~~v~lie~~~~~~~~~~~~~~~~~---~-----------------------~~ 54 (454)
++||+|||||++|+++|..|+ +. |.+|+|+|+++..++.+....++.. . ..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~--G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~ 85 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHEL--GLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYIT 85 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcC--CCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCC
Confidence 379999999999999999999 76 8899999998766554432211110 0 00
Q ss_pred cchhhhHHHHH-hc-Cc--EEE-cceEEEEeCccc----EEEeccCcEEEecEEEEecC--CCCCCCCCC--Cc--eeee
Q psy1545 55 ITVEETDANKF-EG-LC--TVI-VDTVAAIDPRVN----CVITEKQNRIKYKTLCICTG--ASPRKIWYS--PH--VITI 119 (454)
Q Consensus 55 ~~~~~~~~~~~-~~-~i--~~~-~~~v~~i~~~~~----~v~~~~g~~i~~d~lviAtG--~~p~~~~~~--~~--~~~~ 119 (454)
......+...+ .+ ++ .+. ..+|+.++.+.. .|++++|+++.||+||+||| ++|+.|+++ +. ...+
T Consensus 86 ~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~ 165 (540)
T 3gwf_A 86 QPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETI 165 (540)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEEE
T ss_pred HHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCCEE
Confidence 00011122222 22 55 454 458888876544 78888888999999999999 588888887 11 1112
Q ss_pred eccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCC------
Q psy1545 120 RDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTA------ 191 (454)
Q Consensus 120 ~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~------ 191 (454)
++...... ....+|+++|||+|.+|+|+|..|+ +.+||+++|.+++....+++++.....+.+++....
T Consensus 166 ~~~~~~~~---~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~ 242 (540)
T 3gwf_A 166 HTAAWPEG---KSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAK 242 (540)
T ss_dssp EGGGCCSS---CCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHH
T ss_pred EeecCCCc---cccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHH
Confidence 22221111 1124899999999999999999997 899999999998544446777777766665421000
Q ss_pred ------------------Ch---h-----------------------------------hhhhhcccccC-CCCCCCCCC
Q psy1545 192 ------------------KP---E-----------------------------------TIFKRMRYNTG-GEKGPSLGP 214 (454)
Q Consensus 192 ------------------~~---~-----------------------------------~~~~~~~~~~~-~~~~~~l~~ 214 (454)
.. . ....+++-... ..+...+.|
T Consensus 243 ~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P 322 (540)
T 3gwf_A 243 NSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMP 322 (540)
T ss_dssp TSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCC
T ss_pred hccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCC
Confidence 00 0 00000000000 000000011
Q ss_pred c--cccc----cccccCccCCceEEEe--CceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCc
Q psy1545 215 D--WHTQ----VNLHGSSRDTKITIEY--SCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPF 286 (454)
Q Consensus 215 ~--~~~~----~~~~~~l~~~gv~i~~--~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l 286 (454)
+ +-++ -...+.+.+.+|+++. +..|++++.++ |.++||+++++|.||+|||++++.. ++.. +
T Consensus 323 ~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~g-------v~~~dG~~~~~DvIV~ATGf~~~~~-~~~~--~ 392 (540)
T 3gwf_A 323 KGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKG-------VVTEDGVLHELDVLVFATGFDAVDG-NYRR--I 392 (540)
T ss_dssp CSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSE-------EEETTCCEEECSEEEECCCBSCSSH-HHHT--S
T ss_pred CCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCe-------EEcCCCCEEECCEEEECCccCcccc-CcCc--c
Confidence 1 0000 0123445678999996 77999998765 8899999999999999999999875 4443 2
Q ss_pred eecCCCceEeccc----------cc-cccCceeec-CcccccCCccccchhhccChHHHHHHHHHHHhhhcC
Q psy1545 287 ELAPDCGIGVNEL----------MQ-TSISNVYAA-GDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVG 346 (454)
Q Consensus 287 ~~~~~g~i~vd~~----------~~-t~~~~Iya~-GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 346 (454)
.+...+++.+++. +. .+.||+|++ |..+.. ......+..|++++++.|..
T Consensus 393 ~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~----------~s~~~~~e~q~~~i~~~i~~ 454 (540)
T 3gwf_A 393 EIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPF----------TNLPPSIETQVEWISDTIGY 454 (540)
T ss_dssp EEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBC----------SCHHHHHHHHHHHHHHHHHH
T ss_pred eEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCC----------ccHHHHHHHHHHHHHHHHHH
Confidence 3333344555432 22 478999999 776431 12345678889999887764
No 89
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.95 E-value=1.9e-27 Score=249.41 Aligned_cols=254 Identities=17% Similarity=0.136 Sum_probs=168.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccccccccc-chhhhHHHHHhc-CcEEEcceEEEE
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDI-TVEETDANKFEG-LCTVIVDTVAAI 79 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~i~~~~~~v~~i 79 (454)
++||+|||||+||++||..|++. +++|+|||+++.+++.+.+.........+ +........+.+ +++++.++...
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 449 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAAR--GHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVT- 449 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCC-
T ss_pred CCeEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEec-
Confidence 36899999999999999999998 89999999998776554432211111111 122222334444 88887653211
Q ss_pred eCcccEEEeccCcEE-EecEEEEecCCCCCCCCCC-CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--
Q psy1545 80 DPRVNCVITEKQNRI-KYKTLCICTGASPRKIWYS-PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS-- 155 (454)
Q Consensus 80 ~~~~~~v~~~~g~~i-~~d~lviAtG~~p~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~-- 155 (454)
...+ .||+||||||++|+.|+++ .....+.+..+.. ......+++++|||||.+|+|+|..|+
T Consensus 450 -----------~~~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l--~~~~~~~~~VvVIGgG~~g~E~A~~l~~~ 516 (671)
T 1ps9_A 450 -----------ADQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVL--RDKAPVGNKVAIIGCGGIGFDTAMYLSQP 516 (671)
T ss_dssp -----------SSSSCCSSEEEECCCEEECCCCCBTTTSTTEEEHHHHH--TSCCCCCSEEEEECCHHHHHHHHHHHTCC
T ss_pred -----------HHHhhcCCEEEEccCCCcCCCCCCCCCCCcEeeHHHHh--hCCCCCCCeEEEECCChhHHHHHHHHHhc
Confidence 0123 8999999999999988877 1111122333322 112234799999999999999999986
Q ss_pred CCcEE-------------------------------------EEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhh
Q psy1545 156 NVDIV-------------------------------------WVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFK 198 (454)
Q Consensus 156 g~~V~-------------------------------------~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~ 198 (454)
|.+|+ ++++.+..+...+++.....+.+.
T Consensus 517 G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~-------------- 582 (671)
T 1ps9_A 517 GESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTT-------------- 582 (671)
T ss_dssp SSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHH--------------
T ss_pred CCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHH--------------
Confidence 64443 333333322222233333333333
Q ss_pred hcccccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCC--cEEecCEEEEeeccCcC
Q psy1545 199 RMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNG--HTHACDIVVSAIGVVPN 276 (454)
Q Consensus 199 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~D~vi~a~G~~p~ 276 (454)
+++.||++++++.+++++.++ +.+. .+| +++++|.||+|+|++|+
T Consensus 583 ---------------------------l~~~GV~v~~~~~v~~i~~~~-----v~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 583 ---------------------------LLSRGVKMIPGVSYQKIDDDG-----LHVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp ---------------------------HHHTTCEEECSCEEEEEETTE-----EEEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred ---------------------------HHhcCCEEEeCcEEEEEeCCe-----EEEe-cCCeEEEEeCCEEEECCCcccc
Confidence 345899999999999998532 3333 677 67999999999999999
Q ss_pred cccccCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhh
Q psy1545 277 SNIQVHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCM 344 (454)
Q Consensus 277 ~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 344 (454)
.+ +++. + +...++||++|||+... .+.+..|++||..+|.||
T Consensus 630 ~~-l~~~----l------------~~~g~~v~aiGD~~~~~---------~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 630 RA-LAQP----L------------IDSGKTVHLIGGCDVAM---------ELDARRAIAQGTRLALEI 671 (671)
T ss_dssp CT-THHH----H------------HTTTCCEEECGGGTCCS---------SCCHHHHHHHHHHHHHHC
T ss_pred HH-HHHH----H------------HhcCCCEEEECCcCccC---------chhHHHHHHHHHHHHHhC
Confidence 87 6532 1 12237899999998753 235788999999999986
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.94 E-value=1.7e-25 Score=228.14 Aligned_cols=325 Identities=10% Similarity=0.078 Sum_probs=195.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccccc--------------------------cccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKL--------------------------LSDI 55 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~--------------------------~~~~ 55 (454)
++||||||||++|+++|..|++. |.+|+|||+++.+++.+....++.. +...
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~--g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~ 86 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQA--GMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQ 86 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBH
T ss_pred CCCEEEECccHHHHHHHHHHHhC--CCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCH
Confidence 46999999999999999999997 8899999999876655433222210 0000
Q ss_pred chhhhHHHHHhc--Cc--EEE-cceEEEEeCccc----EEEeccCcEEEecEEEEecC--CCCCCCCCC--Cc--eeeee
Q psy1545 56 TVEETDANKFEG--LC--TVI-VDTVAAIDPRVN----CVITEKQNRIKYKTLCICTG--ASPRKIWYS--PH--VITIR 120 (454)
Q Consensus 56 ~~~~~~~~~~~~--~i--~~~-~~~v~~i~~~~~----~v~~~~g~~i~~d~lviAtG--~~p~~~~~~--~~--~~~~~ 120 (454)
.....+...+.+ ++ .+. ..+|+.++.++. .|++++|+++.||+||+||| ++|+.|+++ +. ...++
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~h 166 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGESFH 166 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCCeEE
Confidence 111112222222 44 443 458888875544 78888888999999999999 789888887 11 11122
Q ss_pred ccchHHH---HH-HHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCC----
Q psy1545 121 DTDSVAV---LQ-EKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNT---- 190 (454)
Q Consensus 121 ~~~~~~~---l~-~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~---- 190 (454)
+...... .. ..-..+|+|+|||+|.+|+|+|..|+ +.+||+++|.+++.....++++.....+.+++...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~p~~~~ 246 (545)
T 3uox_A 167 SSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPTILE 246 (545)
T ss_dssp GGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHHHHTHHHHHH
T ss_pred cccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHHHhhhHHHHH
Confidence 2211111 00 00114899999999999999999997 88999999999854334677766665555432100
Q ss_pred --------------------CCh-------------------------------------hhhhhhccccc-CCCCCCCC
Q psy1545 191 --------------------AKP-------------------------------------ETIFKRMRYNT-GGEKGPSL 212 (454)
Q Consensus 191 --------------------~~~-------------------------------------~~~~~~~~~~~-~~~~~~~l 212 (454)
.+. ..+..+++-.. ...+...+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l 326 (545)
T 3uox_A 247 YVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPVVAEKL 326 (545)
T ss_dssp HHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHT
T ss_pred HHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhC
Confidence 000 00000000000 00001112
Q ss_pred CC-ccccc---c----ccccCccCCceEEEe--CceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccC
Q psy1545 213 GP-DWHTQ---V----NLHGSSRDTKITIEY--SCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVH 282 (454)
Q Consensus 213 ~~-~~~~~---~----~~~~~l~~~gv~i~~--~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~ 282 (454)
.| ++... . ...+.+.+.+|+++. +..|++++.++ |.+++| ++++|.||+|||+++++. ++.
T Consensus 327 ~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~g-------v~~~dG-~~~~D~IV~ATGf~~~~~-~~~ 397 (545)
T 3uox_A 327 IPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEG-------IKTADA-AYDLDVIIYATGFDAVTG-SLD 397 (545)
T ss_dssp SCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTE-------EEESSC-EEECSEEEECCCCBSSSC-SCT
T ss_pred CCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCe-------EEeCCC-eeecCEEEECCccccccc-cCC
Confidence 22 11111 0 123445678999997 78999998765 888999 999999999999998765 544
Q ss_pred CCCceecCCCceEecccc-----------ccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcC
Q psy1545 283 GTPFELAPDCGIGVNELM-----------QTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVG 346 (454)
Q Consensus 283 ~~~l~~~~~g~i~vd~~~-----------~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 346 (454)
. +.+...++..+++.. -.+.||+|.+.--... .+ .......+..|++++++.|..
T Consensus 398 ~--~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~----~~---~~s~~~~~e~~~~~i~~~i~~ 463 (545)
T 3uox_A 398 R--IDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNG----ST---FCNVGVCGGLQAEWVLRMISY 463 (545)
T ss_dssp T--SEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGT----GG---GSCHHHHHHHHHHHHHHHHHH
T ss_pred C--ceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCC----Cc---cccHHHHHHHHHHHHHHHHHH
Confidence 3 444334445555331 2468999988421111 00 112345678899999988763
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.94 E-value=2.4e-25 Score=227.20 Aligned_cols=318 Identities=11% Similarity=0.112 Sum_probs=193.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccccccccc--------------------------cccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKL--------------------------LSDI 55 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~--------------------------~~~~ 55 (454)
++||+|||||++|+++|..|++. |.+|+|||+++.+++.+....++.. +...
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~--G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~ 98 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQ--GLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQ 98 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBH
T ss_pred CCCEEEECchHHHHHHHHHHHhC--CCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCH
Confidence 47999999999999999999997 8899999998776654432211110 0000
Q ss_pred chhhhHHHHH-hc-Cc--EEE-cceEEEEeCccc----EEEeccCcEEEecEEEEecC--CCCCCCCCC--Cc--eeeee
Q psy1545 56 TVEETDANKF-EG-LC--TVI-VDTVAAIDPRVN----CVITEKQNRIKYKTLCICTG--ASPRKIWYS--PH--VITIR 120 (454)
Q Consensus 56 ~~~~~~~~~~-~~-~i--~~~-~~~v~~i~~~~~----~v~~~~g~~i~~d~lviAtG--~~p~~~~~~--~~--~~~~~ 120 (454)
.....+...+ .+ ++ .+. ..+|+.++.+.. .|++++|+++.||+||+||| ++|+.|+++ +. ...++
T Consensus 99 ~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~ 178 (549)
T 4ap3_A 99 PEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVH 178 (549)
T ss_dssp HHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEE
Confidence 0011122222 22 54 454 458888876554 78888888999999999999 789888887 11 11222
Q ss_pred ccc---hHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChh-
Q psy1545 121 DTD---SVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPE- 194 (454)
Q Consensus 121 ~~~---~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~- 194 (454)
+.. +...+ .+|+++|||+|.+|+|+|..|+ +.+||+++|.+++.....++++.....+.+++.. +...
T Consensus 179 ~~~~~~~~~~~-----~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~~-~~~~~ 252 (549)
T 4ap3_A 179 TARWPHDGVDF-----TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQKANY-AERRR 252 (549)
T ss_dssp GGGCCTTCCCC-----BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHHHTH-HHHHH
T ss_pred ecccccccccc-----CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHHhcc-HHHHH
Confidence 222 22222 4899999999999999999997 9999999999986433466666665555443200 0000
Q ss_pred ------------------------------------------------------------hhhhhccccc-CCCCCCCCC
Q psy1545 195 ------------------------------------------------------------TIFKRMRYNT-GGEKGPSLG 213 (454)
Q Consensus 195 ------------------------------------------------------------~~~~~~~~~~-~~~~~~~l~ 213 (454)
.+...++-.. ...+...+.
T Consensus 253 ~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~ 332 (549)
T 4ap3_A 253 LSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAVVDDPAVAELLT 332 (549)
T ss_dssp HHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHHS
T ss_pred HHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCC
Confidence 0000000000 000111122
Q ss_pred Cc-cccc-------cccccCccCCceEEE--eCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCC
Q psy1545 214 PD-WHTQ-------VNLHGSSRDTKITIE--YSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHG 283 (454)
Q Consensus 214 ~~-~~~~-------~~~~~~l~~~gv~i~--~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~ 283 (454)
|+ +... -...+.+.+.+|+++ ....|+++..++ |.+++| ++++|.||+|||++++.. ++..
T Consensus 333 P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~g-------v~~~dG-~~~~D~iI~ATGf~~~~~-~~~~ 403 (549)
T 4ap3_A 333 PKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETG-------IVTTGA-HYDLDMIVLATGFDAMTG-SLDK 403 (549)
T ss_dssp CSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTE-------EEESSC-EEECSEEEECCCEEESST-TGGG
T ss_pred CCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCc-------EEeCCC-ceecCEEEECCccccccc-ccCc
Confidence 22 1111 012355677899998 246899998765 888999 999999999999999875 4443
Q ss_pred CCceecCCCceEeccccc-----------cccCceeec-CcccccCCccccchhhccChHHHHHHHHHHHhhhcC
Q psy1545 284 TPFELAPDCGIGVNELMQ-----------TSISNVYAA-GDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVG 346 (454)
Q Consensus 284 ~~l~~~~~g~i~vd~~~~-----------t~~~~Iya~-GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 346 (454)
+.+...+++.+++..+ .+.||.|.+ |--+... .......+..|++++++.|..
T Consensus 404 --~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~--------~~s~~~~~e~~~~~i~~~i~~ 468 (549)
T 4ap3_A 404 --LEIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSV--------LANMVLHSELHVDWVADAIAY 468 (549)
T ss_dssp --SEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGG--------GSCHHHHHHHHHHHHHHHHHH
T ss_pred --eeEECCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCc--------CccHHHHHHHHHHHHHHHHHH
Confidence 3343345566664422 367999986 3221100 112345577889998887754
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.92 E-value=5.9e-24 Score=217.52 Aligned_cols=320 Identities=15% Similarity=0.173 Sum_probs=188.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc------------c--------------cccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK------------L--------------LSDI 55 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~------------~--------------~~~~ 55 (454)
++||+|||||++|+++|..|++. |.+|+|+|+++.+++.+....++. . +...
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~--G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~ 93 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLREL--GRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQ 93 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBH
T ss_pred CCCEEEECccHHHHHHHHHHHhC--CCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCH
Confidence 47999999999999999999998 889999999877654432211110 0 0000
Q ss_pred chhhhHHHHHhc--C--cEEE-cceEEEEeCcc----cEEEeccCcEEEecEEEEecC--CCCCCCCCC--Cc--eeeee
Q psy1545 56 TVEETDANKFEG--L--CTVI-VDTVAAIDPRV----NCVITEKQNRIKYKTLCICTG--ASPRKIWYS--PH--VITIR 120 (454)
Q Consensus 56 ~~~~~~~~~~~~--~--i~~~-~~~v~~i~~~~----~~v~~~~g~~i~~d~lviAtG--~~p~~~~~~--~~--~~~~~ 120 (454)
.....++..+.+ + ..+. ..+|+.++.++ ..|++++|+++.||+||+||| +.|+.|+++ +. ...++
T Consensus 94 ~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~h 173 (542)
T 1w4x_A 94 PEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLYH 173 (542)
T ss_dssp HHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEE
Confidence 001112222222 2 4444 44788776432 367777888999999999999 468887776 11 11122
Q ss_pred ccc---hHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcc-ccccCCcchhhhHHHhhcc------
Q psy1545 121 DTD---SVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHIS-ATFLDPGAAEFFQDSINKT------ 188 (454)
Q Consensus 121 ~~~---~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~-~~~~d~~~~~~~~~~l~~~------ 188 (454)
+.. +... ..+|+++|||+|.+|+|++..++ +.+|+++.|.+.+. +. .+........+.+.+.
T Consensus 174 s~~~~~~~~~-----~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~-~~~~~~~~~~~~~~~~~p~l~~ 247 (542)
T 1w4x_A 174 TGNWPHEPVD-----FSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPA-RNAPLDPEFLADLKKRYAEFRE 247 (542)
T ss_dssp GGGCCSSCCC-----CBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEEC-CCCBCCHHHHHHHHTTHHHHHH
T ss_pred CCCCCCchhc-----cCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccC-CCCCCCHHHHHHHHhhCHHHHH
Confidence 221 1111 14899999999999999999986 89999999998773 43 3444333322222110
Q ss_pred ------C----CCC--------h---h---------------------------------hhhhhcccccCC-CCCCCCC
Q psy1545 189 ------N----TAK--------P---E---------------------------------TIFKRMRYNTGG-EKGPSLG 213 (454)
Q Consensus 189 ------~----~~~--------~---~---------------------------------~~~~~~~~~~~~-~~~~~l~ 213 (454)
. ..+ . . .....++-.... .+...+.
T Consensus 248 ~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 327 (542)
T 1w4x_A 248 ESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLV 327 (542)
T ss_dssp HHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHHS
T ss_pred HHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhcC
Confidence 0 000 0 0 000000000000 0000000
Q ss_pred C-ccc---cc----cccccCccCCceEEE--eCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCC
Q psy1545 214 P-DWH---TQ----VNLHGSSRDTKITIE--YSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHG 283 (454)
Q Consensus 214 ~-~~~---~~----~~~~~~l~~~gv~i~--~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~ 283 (454)
| ++. ++ -...+.+.+.+|+++ .+..|+++..++ |.++| +++++|.||+|||+++++. ++..
T Consensus 328 P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~g-------v~~~d-~~~~~D~ii~atG~~~~~~-~~~~ 398 (542)
T 1w4x_A 328 PKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRG-------VRTSE-REYELDSLVLATGFDALTG-ALFK 398 (542)
T ss_dssp CCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSE-------EEESS-CEEECSEEEECCCCCCTTH-HHHT
T ss_pred CCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCe-------EEeCC-eEEecCEEEEcCCcccccc-CcCc
Confidence 1 000 00 002233466789988 367899997654 78888 8999999999999999876 5554
Q ss_pred CCceecCCCceEeccccc-----------cccCceeec-CcccccCCccccchhhccChHHHHHHHHHHHhhhcCCC
Q psy1545 284 TPFELAPDCGIGVNELMQ-----------TSISNVYAA-GDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAV 348 (454)
Q Consensus 284 ~~l~~~~~g~i~vd~~~~-----------t~~~~Iya~-GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (454)
. .+..++++.+++..+ ...||+|++ |+.+... .......|..|+++++++|....
T Consensus 399 ~--~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~--------~~~~~~~~e~q~~~ia~~i~~~~ 465 (542)
T 1w4x_A 399 I--DIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSA--------LSNMLVSIEQHVEWVTDHIAYMF 465 (542)
T ss_dssp S--EEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGG--------GSCHHHHHHHHHHHHHHHHHHHH
T ss_pred e--eeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcc--------cccHHHHHHHHHHHHHHHHHHHH
Confidence 3 332334455554222 356778777 7765321 11234678999999999988644
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.87 E-value=1.5e-22 Score=176.70 Aligned_cols=156 Identities=16% Similarity=0.129 Sum_probs=123.2
Q ss_pred eEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccc--------c-----CCcchhhhHHHhhccCCCChhhhhhhcc
Q psy1545 137 KIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATF--------L-----DPGAAEFFQDSINKTNTAKPETIFKRMR 201 (454)
Q Consensus 137 ~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~--------~-----d~~~~~~~~~~l~~~~~~~~~~~~~~~~ 201 (454)
+++|||||++|+++|..|. |.+|+++++.+..+.+. + ++++.+.+
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-------------------- 62 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRL-------------------- 62 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHH--------------------
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHH--------------------
Confidence 7899999999999999996 99999999987655320 0 01111222
Q ss_pred cccCCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCccccc
Q psy1545 202 YNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQV 281 (454)
Q Consensus 202 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~ 281 (454)
.+.+++.||+++.+ ++++++.+++ .+.+.+++| ++++|.||+|+|.+|+. .
T Consensus 63 ---------------------~~~~~~~gv~v~~~-~v~~i~~~~~---~~~v~~~~g-~i~ad~vI~A~G~~~~~---~ 113 (180)
T 2ywl_A 63 ---------------------EAHARRYGAEVRPG-VVKGVRDMGG---VFEVETEEG-VEKAERLLLCTHKDPTL---P 113 (180)
T ss_dssp ---------------------HHHHHHTTCEEEEC-CCCEEEECSS---SEEEECSSC-EEEEEEEEECCTTCCHH---H
T ss_pred ---------------------HHHHHHcCCEEEeC-EEEEEEEcCC---EEEEEECCC-EEEECEEEECCCCCCCc---c
Confidence 22334589999999 9999987653 467888888 89999999999999853 3
Q ss_pred CCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCCCCCC
Q psy1545 282 HGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGAVKNE 351 (454)
Q Consensus 282 ~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 351 (454)
+..+++++ +|.|.||+++||+.|+|||+|||+..+ .++++.|..||+.||.||.+.+.++
T Consensus 114 ~~~g~~~~-~g~i~vd~~~~t~~~~i~a~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 114 SLLGLTRR-GAYIDTDEGGRTSYPRVYAAGVARGKV---------PGHAIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp HHHTCCEE-TTEECCCTTCBCSSTTEEECGGGGTCC---------SCCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ccCCCCcc-CceEEeCCCCCcCCCCEEEeecccCcc---------hhhHHHHHHhHHHHHHHHHHHhhhc
Confidence 44567788 899999999999999999999999854 2378899999999999999865543
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.84 E-value=1.1e-19 Score=183.80 Aligned_cols=304 Identities=14% Similarity=0.110 Sum_probs=159.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcC------------CCCeEEEECCCCcccccccc--cc------ccccc----------
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLH------------PGESIGLVTPSGIVKAVTKT--VP------VTKLL---------- 52 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~------------~g~~v~lie~~~~~~~~~~~--~~------~~~~~---------- 52 (454)
+||||||+||+||++|..|.+.+ .+...+.+|+.+.+.+.... +. +.+.+
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~ 119 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSF 119 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTT
T ss_pred CcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCcc
Confidence 79999999999999999998741 23467888988765422111 00 00000
Q ss_pred ------------------cc-cchh---hhHHHHHhc--CcEE-EcceEEEEeCcc----------cEEEeccC-----c
Q psy1545 53 ------------------SD-ITVE---ETDANKFEG--LCTV-IVDTVAAIDPRV----------NCVITEKQ-----N 92 (454)
Q Consensus 53 ------------------~~-~~~~---~~~~~~~~~--~i~~-~~~~v~~i~~~~----------~~v~~~~g-----~ 92 (454)
.. +... ..+++++.+ +..+ +..+|+.+.+.. .+|++.++ +
T Consensus 120 sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~ 199 (501)
T 4b63_A 120 TFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEIS 199 (501)
T ss_dssp SHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEE
T ss_pred chHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEE
Confidence 00 0011 123333333 3333 344777765321 35655443 3
Q ss_pred EEEecEEEEecCCCCCCCCCC---CceeeeeccchHHHHHHH---hhcCCeEEEEcCchhHHHHHHHhc----CCcEEEE
Q psy1545 93 RIKYKTLCICTGASPRKIWYS---PHVITIRDTDSVAVLQEK---LKSAKKIVVIGNGGIATELVHELS----NVDIVWV 162 (454)
Q Consensus 93 ~i~~d~lviAtG~~p~~~~~~---~~~~~~~~~~~~~~l~~~---~~~~~~vvVvG~G~~g~e~a~~l~----g~~V~~i 162 (454)
++.+++||+|||..|..|... +.++ ++.+-....... -..+|+|+|||+|.+|+|++..|+ +.+|+|+
T Consensus 200 ~~~ar~vVlatG~~P~iP~~~~~~g~v~--Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~ 277 (501)
T 4b63_A 200 ARRTRKVVIAIGGTAKMPSGLPQDPRII--HSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLI 277 (501)
T ss_dssp EEEEEEEEECCCCEECCCTTSCCCTTEE--EGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEE
T ss_pred EEEeCEEEECcCCCCCCCCCCCCCccee--eccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEE
Confidence 689999999999998888765 3343 333322222211 125899999999999999999885 7899999
Q ss_pred EeCCCccccc--------cCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccc---cC-ccCCc
Q psy1545 163 VKDKHISATF--------LDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLH---GS-SRDTK 230 (454)
Q Consensus 163 ~~~~~~~~~~--------~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~-l~~~g 230 (454)
.|++.+.+.. +.|+..+.+.... ......+...........+...+..++...++.. .. .....
T Consensus 278 ~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~----~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~ 353 (501)
T 4b63_A 278 MRDSAMRPSDDSPFVNEIFNPERVDKFYSQS----AAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQ 353 (501)
T ss_dssp CSSSSCCBCCCCTTGGGGGSTTHHHHHHTSC----HHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCS
T ss_pred eCCCccccccccccchhhcCHHHHHHHHhCC----HHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccc
Confidence 9998776532 1222211111000 0000001111111111111111111111100000 00 00112
Q ss_pred eEEEeCceEEEEEcCCCCccce------------EEEecCCcEEecCEEEEeeccCcCccccc-CCC-CceecCCCceEe
Q psy1545 231 ITIEYSCEVERIVDSEDDTCNA------------YVKLTNGHTHACDIVVSAIGVVPNSNIQV-HGT-PFELAPDCGIGV 296 (454)
Q Consensus 231 v~i~~~~~v~~i~~~~~~~~~~------------~v~~~~g~~~~~D~vi~a~G~~p~~~~~~-~~~-~l~~~~~g~i~v 296 (454)
..+.++..+..+..... ...+ .+.+.+|+++++|.||+|||++|+.+.++ ... .+..+.+|.+.|
T Consensus 354 ~~l~~~~~v~~~~~~~~-~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v 432 (501)
T 4b63_A 354 HRILPERKITRVEHHGP-QSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKP 432 (501)
T ss_dssp SEEECSEEEEEEECCSS-SSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCB
T ss_pred eeecCCcceeeeeecCC-CCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeee
Confidence 23444555554443221 1111 24566788999999999999999864222 221 244567788888
Q ss_pred ccccc--c------ccCceeecCcc
Q psy1545 297 NELMQ--T------SISNVYAAGDV 313 (454)
Q Consensus 297 d~~~~--t------~~~~Iya~GD~ 313 (454)
+..++ + ..++||+.|-+
T Consensus 433 ~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 433 HRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp CTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred CCCcEEeecCCccCCCceEEecCCC
Confidence 87655 2 24679999954
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.73 E-value=8.6e-19 Score=175.92 Aligned_cols=270 Identities=18% Similarity=0.128 Sum_probs=151.8
Q ss_pred cEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccccc----------c---------------------------
Q psy1545 4 TYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKT----------V--------------------------- 46 (454)
Q Consensus 4 dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~----------~--------------------------- 46 (454)
||+|||||+||++||..|++. |.+|+|+|+.. .++...+ +
T Consensus 1 DVvVIG~G~AGl~aA~~la~~--G~~V~viek~~-~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~ 77 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA--GKKVTLISKRI-DGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYV 77 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSST-TCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCC-CCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHH
Confidence 799999999999999999997 89999999983 2211000 0
Q ss_pred ----------------cccc------cc--c---------ccchhhhHHHHHhc-CcEEEcc-eEEEEeCcccEE---Ee
Q psy1545 47 ----------------PVTK------LL--S---------DITVEETDANKFEG-LCTVIVD-TVAAIDPRVNCV---IT 88 (454)
Q Consensus 47 ----------------~~~~------~~--~---------~~~~~~~~~~~~~~-~i~~~~~-~v~~i~~~~~~v---~~ 88 (454)
.+.. .. . ...+.....+.+.+ +++++.+ .+ .+..+...+ .+
T Consensus 78 ~~~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v 156 (472)
T 2e5v_A 78 TSEAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVT 156 (472)
T ss_dssp HHHHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEE
Confidence 0000 00 0 00011122233333 8998866 57 776544433 33
Q ss_pred c-cCcEEEecEEEEecCCCCCCCCCCCceeeeeccchHHHHHHH---h------hcCCeEEEEcCchhHHHHHHHhc--C
Q psy1545 89 E-KQNRIKYKTLCICTGASPRKIWYSPHVITIRDTDSVAVLQEK---L------KSAKKIVVIGNGGIATELVHELS--N 156 (454)
Q Consensus 89 ~-~g~~i~~d~lviAtG~~p~~~~~~~~~~~~~~~~~~~~l~~~---~------~~~~~vvVvG~G~~g~e~a~~l~--g 156 (454)
. ++..+.+|.+|+|||+.+..++...+.. ..+.+........ + +.....+++|+| +++++..+. |
T Consensus 157 ~~~~g~~~a~~VVlAtGg~~~~~~~~~~~~-~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G 233 (472)
T 2e5v_A 157 EKRGLVEDVDKLVLATGGYSYLYEYSSTQS-TNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRGEG 233 (472)
T ss_dssp TTTEEECCCSEEEECCCCCGGGSSSBSSCT-TCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHHTT
T ss_pred EeCCCeEEeeeEEECCCCCcccCccccCCC-CCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcCCc
Confidence 2 2235789999999999876655431100 1122221111110 0 001234455766 777766665 6
Q ss_pred CcEEEEEeCCCccccccCCcc--------hhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccC
Q psy1545 157 VDIVWVVKDKHISATFLDPGA--------AEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRD 228 (454)
Q Consensus 157 ~~V~~i~~~~~~~~~~~d~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 228 (454)
..+ +..++++|+++ ++++. +..+...+ ++
T Consensus 234 ~~~-v~~~g~rf~~~-~~~~~el~~rd~v~~~i~~~~-----------------------------------------~~ 270 (472)
T 2e5v_A 234 AQI-INENGERFLFN-YDKRGELAPRDILSRAIYIEM-----------------------------------------LK 270 (472)
T ss_dssp CEE-EETTCCCGGGG-TCTTGGGSCHHHHHHHHHHHH-----------------------------------------HH
T ss_pred eEE-ECCCCCCCCcc-CCcccCcCchhHHHHHHHHHH-----------------------------------------Hh
Confidence 666 77788898876 45543 11222222 11
Q ss_pred CceEEEeCceEEEEEcCCCCccceEEEecCCcEEe-cCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCce
Q psy1545 229 TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHA-CDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNV 307 (454)
Q Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~-~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~I 307 (454)
.|. ++.+.. .-. . +. +.++ .+.++.+.|..|+ + +++..+......|+|.||+++||++|+|
T Consensus 271 ~~~-v~ld~~-----~~~----~----~~--~~~~~~~~~~~~~G~dp~-~-~i~v~p~~~~~~GGI~vd~~~~t~ipgL 332 (472)
T 2e5v_A 271 GHK-VFIDLS-----KIE----D----FE--RKFPVVAKYLARHGHNYK-V-KIPIFPAAHFVDGGIRVNIRGESNIVNL 332 (472)
T ss_dssp TCC-EEEECT-----TCT----T----HH--HHCHHHHHHHHHTTCCTT-S-CEECEEEEEEESCEEECCTTCBCSSBTE
T ss_pred CCc-EEEecc-----chH----H----HH--HHhHHHHHHHHHhCcCcc-c-ceEeehhhceeCCCeEECCCCccccCCE
Confidence 221 222211 000 0 00 1233 3667788899999 6 6665544445589999999999999999
Q ss_pred eecCcccccCCccccchhhccChHHHHHH----HHHHHhhhcC
Q psy1545 308 YAAGDVCTPSWDLAKQWFQMRLWTQAKHM----GTYAAKCMVG 346 (454)
Q Consensus 308 ya~GD~~~~~~~~~~~~~~~~~~~~A~~~----g~~aa~~i~~ 346 (454)
||+|||++...... .+++.+|..+ |+.|++++++
T Consensus 333 yAaGd~a~~~~hg~-----~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 333 YAIGEVSDSGLHGA-----NRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp EECGGGEECSSSTT-----SCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred EecchhcccccCCC-----CCCCcccHHHHHHHHHHHHHHHHh
Confidence 99999988433222 2455556655 5555555554
No 96
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.65 E-value=3.8e-19 Score=170.27 Aligned_cols=254 Identities=10% Similarity=0.003 Sum_probs=135.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcceEEEEe
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVDTVAAID 80 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~v~~i~ 80 (454)
.+||+||||||||++||++|++...|++|+|+|+++.+++......+ .++...+.......+.+ ++++...
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~--~~~~~~l~~~~~~~~~e~Gv~~~~~------ 136 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ--LFSAMVMRKPAHLFLQELEIPYEDE------ 136 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCST--TCCCEEEETTTHHHHHHTTCCCEEC------
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCc--cCCHHHHHHHHHHHHHHcCCEEEEC------
Confidence 37999999999999999999865459999999999877654433221 11111122222233333 6654321
Q ss_pred CcccEEEeccCcEEEecEEEEecCCCCCCCCCC-CceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CC
Q psy1545 81 PRVNCVITEKQNRIKYKTLCICTGASPRKIWYS-PHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NV 157 (454)
Q Consensus 81 ~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~ 157 (454)
+......+..+++++..++.+..+ ...+......++.........+++++|+|+|.++++.|..+. +.
T Consensus 137 ---------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~ 207 (326)
T 3fpz_A 137 ---------GDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMD 207 (326)
T ss_dssp ---------SSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCC
T ss_pred ---------CcceecceeEEEEcchhhhccccccceeecccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccC
Confidence 111223333444555544444443 111100000000000011123789999999999999998775 78
Q ss_pred cEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCCccccccccccCccCCceEEEeCc
Q psy1545 158 DIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSC 237 (454)
Q Consensus 158 ~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~ 237 (454)
++++..+....... +. +. ....
T Consensus 208 ~v~i~~~~~~~~~~---~~-------------------------------------------------~~-~~~~----- 229 (326)
T 3fpz_A 208 PNVIELAGYKNDGT---RD-------------------------------------------------LS-QKHG----- 229 (326)
T ss_dssp CEEEEESCBCTTSS---BC-------------------------------------------------TT-SCCC-----
T ss_pred cEEEEeeccccccc---cc-------------------------------------------------ce-eecc-----
Confidence 88888765433210 00 00 0000
Q ss_pred eEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcccccCCCCceecCCCceEeccccccccCceeecCcccccC
Q psy1545 238 EVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPS 317 (454)
Q Consensus 238 ~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~ 317 (454)
.+........ .. ........+.+|.+..+.|.+|.. ..+ ..+.+.+|..++|++|+|||+||++..-
T Consensus 230 ~~~~~~g~~~---~~-~~~~~~~~~~~~~~~~~~g~~~~~--------~~~-~e~~iv~~~~~~t~vpGv~aaGDaa~~v 296 (326)
T 3fpz_A 230 VILSTTGHDG---PF-GAFCAKRIVDIDQNQKLGGMKGLD--------MNH-AEHDVVIHSGAYAGVDNMYFAGMEVAEL 296 (326)
T ss_dssp EEEECCCSCS---SS-CSHHHHHHHHHCTTCCCCCCCCBC--------HHH-HHHHHHHHCEECTTSBTEEECTHHHHHH
T ss_pred eEEEEeccee---eE-eecceeEEEecCceeeecceeccc--------ccc-cCCeEEECCCeEECCCCEEEEchHhccc
Confidence 0111111110 00 000111234556556666665532 122 2356888899999999999999998632
Q ss_pred CccccchhhccChHHHHHHHHHHHhhhcC
Q psy1545 318 WDLAKQWFQMRLWTQAKHMGTYAAKCMVG 346 (454)
Q Consensus 318 ~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 346 (454)
... + +.-+....++..|+.||+.|..
T Consensus 297 ~g~-~--rmGp~~g~mi~SG~~AAe~I~~ 322 (326)
T 3fpz_A 297 DGL-N--RMGPTFGAMALSGVHAAEQILK 322 (326)
T ss_dssp HTC-C--BCCSCCHHHHHHHHHHHHHHHH
T ss_pred cCC-C--cCchHHHHHHHHHHHHHHHHHH
Confidence 111 0 0001233456789999998875
No 97
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.53 E-value=2.5e-14 Score=129.76 Aligned_cols=176 Identities=11% Similarity=0.118 Sum_probs=103.9
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcc----hhhhHHHhhccCCCChhhhhhhcccccCCCCC
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGA----AEFFQDSINKTNTAKPETIFKRMRYNTGGEKG 209 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (454)
.+++|||||+.|+++|..|+ |.+|+++++..........+.. ...+.+.+. ...+
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~-------------------d~~g 64 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAY-------------------DPKD 64 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHC-------------------CTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhc-------------------cCCC
Confidence 47999999999999999996 9999999987321110001100 000111110 0000
Q ss_pred CCCCCccccccccccCccCC-ceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCccc---------
Q psy1545 210 PSLGPDWHTQVNLHGSSRDT-KITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNI--------- 279 (454)
Q Consensus 210 ~~l~~~~~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~--------- 279 (454)
+ -...+.. .+.+.+++. |++++ ++.|+++..+++ ....+.+++|+++++|.||+|+|..++...
T Consensus 65 ~-~~~~~~~--~l~~~~~~~~gv~i~-~~~v~~i~~~~~--~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~ 138 (232)
T 2cul_A 65 E-RVWAFHA--RAKYLLEGLRPLHLF-QATATGLLLEGN--RVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEA 138 (232)
T ss_dssp C-CHHHHHH--HHHHHHHTCTTEEEE-ECCEEEEEEETT--EEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESE
T ss_pred C-CHHHHHH--HHHHHHHcCCCcEEE-EeEEEEEEEeCC--EEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCC
Confidence 0 0001111 123334555 99999 468999986542 234677888888999999999999654320
Q ss_pred -------------ccCCCCceecCCC--------c-------eEecc------cc-ccccCceeecCcccccCCccccch
Q psy1545 280 -------------QVHGTPFELAPDC--------G-------IGVNE------LM-QTSISNVYAAGDVCTPSWDLAKQW 324 (454)
Q Consensus 280 -------------~~~~~~l~~~~~g--------~-------i~vd~------~~-~t~~~~Iya~GD~~~~~~~~~~~~ 324 (454)
.+...++.++... . ..+.. .+ +|++|+|||+|||+ ..
T Consensus 139 g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~------- 210 (232)
T 2cul_A 139 GRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-RE------- 210 (232)
T ss_dssp EETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SC-------
T ss_pred CCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cC-------
Confidence 0111222221111 0 00110 11 27899999999999 43
Q ss_pred hhccChHHHHHHHHHHHhhhcCC
Q psy1545 325 FQMRLWTQAKHMGTYAAKCMVGA 347 (454)
Q Consensus 325 ~~~~~~~~A~~~g~~aa~~i~~~ 347 (454)
..+..|+.||+.+|.+|...
T Consensus 211 ---g~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 211 ---GDYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHH
T ss_pred ---ccHHHHHHHHHHHHHHHHhh
Confidence 36667899999999999864
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.49 E-value=2.2e-15 Score=147.91 Aligned_cols=36 Identities=33% Similarity=0.517 Sum_probs=33.3
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++||+|||||++|+++|..|++. |.+|+|+|+.+..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~--G~~V~vlEk~~~~ 39 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL--GKSVTVFDNGKKI 39 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhC--CCCEEEEeCCCCC
Confidence 48999999999999999999998 8999999998754
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.26 E-value=1.3e-12 Score=129.78 Aligned_cols=84 Identities=18% Similarity=0.197 Sum_probs=64.0
Q ss_pred cCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeec--------cCcCcccccCCCCcee-cCCCceEec
Q psy1545 227 RDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIG--------VVPNSNIQVHGTPFEL-APDCGIGVN 297 (454)
Q Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G--------~~p~~~~~~~~~~l~~-~~~g~i~vd 297 (454)
++.| +|++++.|++|+.+++ .+.|.+++|+++++|.||+|+| +.|+.+ ......+.. .....++|+
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~~---~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~-~~~~~~~~~~~~~~~~kv~ 289 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSGD---VVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALP-ERRRSVIEEGHGGQGLKIL 289 (431)
T ss_dssp TTCS-CEESSCCEEEEECSSS---SEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHHHHCCCCCEEEEE
T ss_pred hhCC-ceEeCCEEEEEEEcCC---eEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCC-HHHHHHHHhCCCcceEEEE
Confidence 3467 9999999999987653 4678888898899999999999 788765 222111111 123459999
Q ss_pred cccccccCceeecCcccc
Q psy1545 298 ELMQTSISNVYAAGDVCT 315 (454)
Q Consensus 298 ~~~~t~~~~Iya~GD~~~ 315 (454)
..++|+.+++|+.||+..
T Consensus 290 ~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 290 IHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp EEEESCCTTEEEEBSSSS
T ss_pred EEECCCCcCceEcCCCCE
Confidence 999999999999999843
No 100
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.13 E-value=2.2e-10 Score=99.21 Aligned_cols=103 Identities=18% Similarity=0.110 Sum_probs=71.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc----cccccccccccccchhhhHHHHHhc-CcEEEcceEE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV----TKTVPVTKLLSDITVEETDANKFEG-LCTVIVDTVA 77 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~v~ 77 (454)
+|++|||||++|+.+|..|++. +.+|+|+|+.+..... .+++.++......++.....+.+.+ +++++.++++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~--g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~~v~ 79 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA--GLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPGVVK 79 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeCEEE
Confidence 7999999999999999999998 8999999998632110 0011111111122333334445555 8998866888
Q ss_pred EEeCcc--cEEEeccCcEEEecEEEEecCCCCC
Q psy1545 78 AIDPRV--NCVITEKQNRIKYKTLCICTGASPR 108 (454)
Q Consensus 78 ~i~~~~--~~v~~~~g~~i~~d~lviAtG~~p~ 108 (454)
.++.+. ..+.+++| ++.+|.+|+|+|.+|.
T Consensus 80 ~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 80 GVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT 111 (180)
T ss_dssp EEEECSSSEEEECSSC-EEEEEEEEECCTTCCH
T ss_pred EEEEcCCEEEEEECCC-EEEECEEEECCCCCCC
Confidence 887543 35677677 8999999999999874
No 101
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.07 E-value=2.6e-10 Score=106.46 Aligned_cols=194 Identities=11% Similarity=0.047 Sum_probs=109.5
Q ss_pred CeEEEEcCchhHHHHHHHhc---CCcEEEEEeCCCccccccC-Ccc-h-----hhhHHHhhccCCCChhhhhhhcccccC
Q psy1545 136 KKIVVIGNGGIATELVHELS---NVDIVWVVKDKHISATFLD-PGA-A-----EFFQDSINKTNTAKPETIFKRMRYNTG 205 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~---g~~V~~i~~~~~~~~~~~d-~~~-~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~ 205 (454)
.+++|||||++|+.+|..|+ |.+|+++++.+.+...... ... . ....+.+.+ ..+.+.
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~------------~G~~~~ 107 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDE------------IGVAYD 107 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHH------------HTCCCE
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHH------------cCCCcc
Confidence 47999999999999999884 7899999998754321000 000 0 000111110 000000
Q ss_pred CCCCCC----CCCccccccccccCc-cCCceEEEeCceEEEEEcCCCCccceEEEec---------CC-----cEEecCE
Q psy1545 206 GEKGPS----LGPDWHTQVNLHGSS-RDTKITIEYSCEVERIVDSEDDTCNAYVKLT---------NG-----HTHACDI 266 (454)
Q Consensus 206 ~~~~~~----l~~~~~~~~~~~~~l-~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~---------~g-----~~~~~D~ 266 (454)
.. ... -..++.. .+.+.+ ++.|+++++++.|+++..+++ ....+.+. +| .++++|.
T Consensus 108 ~~-~~~~~~~~~~~~~~--~l~~~~~~~~gv~i~~~~~V~~i~~~~~--~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~ 182 (284)
T 1rp0_A 108 EQ-DTYVVVKHAALFTS--TIMSKLLARPNVKLFNAVAAEDLIVKGN--RVGGVVTNWALVAQNHHTQSCMDPNVMEAKI 182 (284)
T ss_dssp EC-SSEEEESCHHHHHH--HHHHHHHTSTTEEEEETEEEEEEEEETT--EEEEEEEEEHHHHTCTTTSSCCCCEEEEEEE
T ss_pred cC-CCEEEecCHHHHHH--HHHHHHHhcCCCEEEcCcEEEEEEecCC--eEEEEEEeccccccccCccccCceEEEECCE
Confidence 00 000 0001111 122333 347999999999999986542 22234432 32 6799999
Q ss_pred EEEeeccCcCcccc----cCCCC--ceecCCCceEecc-------ccccccCceeecCcccccCCccccchhhccChHHH
Q psy1545 267 VVSAIGVVPNSNIQ----VHGTP--FELAPDCGIGVNE-------LMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQA 333 (454)
Q Consensus 267 vi~a~G~~p~~~~~----~~~~~--l~~~~~g~i~vd~-------~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A 333 (454)
||+|+|..++...+ +...+ +.+....++.+|. ..+++.|++|++||++.... . .+...+.+..+
T Consensus 183 VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~-g--~~~~gp~~~~~ 259 (284)
T 1rp0_A 183 VVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEID-G--APRMGPTFGAM 259 (284)
T ss_dssp EEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHHH-T--CEECCSCCHHH
T ss_pred EEECCCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhhc-C--CCCcChHHHHH
Confidence 99999988764311 11101 1122233344442 34678899999999875311 1 11123457788
Q ss_pred HHHHHHHHhhhcCCCC
Q psy1545 334 KHMGTYAAKCMVGAVK 349 (454)
Q Consensus 334 ~~~g~~aa~~i~~~~~ 349 (454)
..+|+.+|.++...+.
T Consensus 260 ~~sG~~~a~~i~~~l~ 275 (284)
T 1rp0_A 260 MISGQKAGQLALKALG 275 (284)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHhHHHHHHHHHHHhh
Confidence 9999999999987664
No 102
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.07 E-value=3.6e-10 Score=116.39 Aligned_cols=37 Identities=24% Similarity=0.318 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++||||||||+||++||..|++.+++.+|+|||+.+.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 4799999999999999999999833399999999754
No 103
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.04 E-value=8.4e-10 Score=112.65 Aligned_cols=141 Identities=15% Similarity=0.156 Sum_probs=87.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC-cccccccccc---------------ccc---------------
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG-IVKAVTKTVP---------------VTK--------------- 50 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~-~~~~~~~~~~---------------~~~--------------- 50 (454)
++||||||||+||++||..|++. |.+|+|||+.+ ..+.....+. +..
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~--G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~ 105 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARM--GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI 105 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECChHHHHHHHHHHHhC--CCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhh
Confidence 47999999999999999999998 99999999974 1211000000 000
Q ss_pred -------ccc----cc---chhhhHHHHHhc--CcEEEcceEEEEeCccc---EEEeccCcEEEecEEEEecCCCCCCCC
Q psy1545 51 -------LLS----DI---TVEETDANKFEG--LCTVIVDTVAAIDPRVN---CVITEKQNRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 51 -------~~~----~~---~~~~~~~~~~~~--~i~~~~~~v~~i~~~~~---~v~~~~g~~i~~d~lviAtG~~p~~~~ 111 (454)
... .. .+.....+.+.+ +++++.++|+.+..+.. .|.+.+|..+.+|.||+|||+.+..+.
T Consensus 106 l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~ 185 (651)
T 3ces_A 106 LNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKI 185 (651)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCEE
T ss_pred hhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCcc
Confidence 000 00 011122233443 78888889999864433 456667888999999999999876654
Q ss_pred CCCceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEE
Q psy1545 112 YSPHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVV 163 (454)
Q Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~ 163 (454)
+++.. + . .+.+ +| |.++++++..|. |.+|+.+.
T Consensus 186 i~G~~----~------~-----~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 186 HIGLD----N------Y-----SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp ECC--------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred ccCcc----c------C-----CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 43110 0 0 1333 46 788999999886 99999885
No 104
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.03 E-value=1.3e-09 Score=98.46 Aligned_cols=105 Identities=21% Similarity=0.194 Sum_probs=69.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc-----cccc---------cchhhhHHHHHhc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK-----LLSD---------ITVEETDANKFEG 67 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~-----~~~~---------~~~~~~~~~~~~~ 67 (454)
++||+|||||++|+++|..|++. +.+|+|||+.....+.+..+.... .... ..+.....+.+.+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~--g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~ 80 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK--GVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEG 80 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHc
Confidence 68999999999999999999998 899999999732211111111100 0000 0112222333443
Q ss_pred --CcEEEcceEEEEeCccc---EEEeccCcEEEecEEEEecCCCCC
Q psy1545 68 --LCTVIVDTVAAIDPRVN---CVITEKQNRIKYKTLCICTGASPR 108 (454)
Q Consensus 68 --~i~~~~~~v~~i~~~~~---~v~~~~g~~i~~d~lviAtG~~p~ 108 (454)
+++++..+|+.+..+.. .|.+.+|+++++|++|+|+|....
T Consensus 81 ~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 81 LRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp CTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred CCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 78888778888875443 356667878999999999998653
No 105
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.90 E-value=4.4e-09 Score=106.99 Aligned_cols=142 Identities=17% Similarity=0.178 Sum_probs=90.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC-cccccccccc---------------ccc---------------
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG-IVKAVTKTVP---------------VTK--------------- 50 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~-~~~~~~~~~~---------------~~~--------------- 50 (454)
++||+|||||+||++||..|++. |.+|+|||+.. ..+.....+. +..
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~--G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~ 104 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARM--GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKM 104 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceee
Confidence 37999999999999999999998 89999999974 2211000000 000
Q ss_pred -------ccc-------ccchhhhHHHHHhc--CcEEEcceEEEEeCccc---EEEeccCcEEEecEEEEecCCCCCCCC
Q psy1545 51 -------LLS-------DITVEETDANKFEG--LCTVIVDTVAAIDPRVN---CVITEKQNRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 51 -------~~~-------~~~~~~~~~~~~~~--~i~~~~~~v~~i~~~~~---~v~~~~g~~i~~d~lviAtG~~p~~~~ 111 (454)
... ...+.....+.+.+ +++++.++|+.+..+.. .|.+.+|..+.+|.||+|||+.+..+.
T Consensus 105 l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~ 184 (637)
T 2zxi_A 105 LNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVI 184 (637)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCEE
T ss_pred cccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCce
Confidence 000 00011122233433 78988889998865433 366778889999999999999876654
Q ss_pred CCCceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEe
Q psy1545 112 YSPHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVK 164 (454)
Q Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~ 164 (454)
++.... . .+.+ .|+.++++++..|. |.+++.+.+
T Consensus 185 ~~G~~~-~--------------~~Gr----~G~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 185 YIGDKM-I--------------PGGR----LGEPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp EETTEE-E--------------ECSB----TTBCCBCTHHHHHHHTTCCCEEEEE
T ss_pred ecccee-c--------------CCCC----CCchhHHHHHHHHHhcCCceEEecC
Confidence 431111 0 0222 23567888888775 888777654
No 106
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.89 E-value=7.6e-09 Score=101.66 Aligned_cols=103 Identities=12% Similarity=0.203 Sum_probs=67.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccc--------cccc-------c----cccc----c-----
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVT--------KTVP-------V----TKLL----S----- 53 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~--------~~~~-------~----~~~~----~----- 53 (454)
++||+|||||++|++||..|++. |.+|+|+|+.+..+... +... + +... .
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~--G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKR--GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 47999999999999999999998 89999999987643211 0000 0 0000 0
Q ss_pred --------------------------ccchhhhHHHHHhc-CcEEEcc-eEEEEeCccc--EEEeccCcEEEecEEEEec
Q psy1545 54 --------------------------DITVEETDANKFEG-LCTVIVD-TVAAIDPRVN--CVITEKQNRIKYKTLCICT 103 (454)
Q Consensus 54 --------------------------~~~~~~~~~~~~~~-~i~~~~~-~v~~i~~~~~--~v~~~~g~~i~~d~lviAt 103 (454)
..++.....+.+.+ +++++.+ +|+.+..+.. .|.+.+| .+.+|+||+||
T Consensus 105 ~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAt 183 (417)
T 3v76_A 105 DFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVAS 183 (417)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECC
T ss_pred HHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECC
Confidence 00111122233334 8998754 8888865443 5666566 89999999999
Q ss_pred CCCC
Q psy1545 104 GASP 107 (454)
Q Consensus 104 G~~p 107 (454)
|..+
T Consensus 184 G~~S 187 (417)
T 3v76_A 184 GGKS 187 (417)
T ss_dssp CCSS
T ss_pred CCcc
Confidence 9875
No 107
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.87 E-value=9e-09 Score=100.09 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=70.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccc---ccc----------cc-------------------c
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVT---KTV----------PV-------------------T 49 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~---~~~----------~~-------------------~ 49 (454)
++||+|||||++|+++|..|++. |.+|+|+|+.+...... ... .+ .
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~--G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 88 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN--GWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHN 88 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCC
Confidence 37999999999999999999998 89999999987653100 000 00 0
Q ss_pred c--------cccc-----cchhhhHHHHHhc-CcEEEcc-eEEEEeCcccEEEeccCcEEEecEEEEecCCCC
Q psy1545 50 K--------LLSD-----ITVEETDANKFEG-LCTVIVD-TVAAIDPRVNCVITEKQNRIKYKTLCICTGASP 107 (454)
Q Consensus 50 ~--------~~~~-----~~~~~~~~~~~~~-~i~~~~~-~v~~i~~~~~~v~~~~g~~i~~d~lviAtG~~p 107 (454)
. .... ..+.....+.+.+ +++++.+ +|+.++.+. .|++.+|+++.+|.||.|+|...
T Consensus 89 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 89 KSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp EEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTC
T ss_pred ceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccH
Confidence 0 0000 0111122233333 8998865 888888755 78888888999999999999864
No 108
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.84 E-value=2e-08 Score=93.55 Aligned_cols=108 Identities=16% Similarity=0.096 Sum_probs=68.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc-ccccc-c----------------cccc----------c
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV-TKTVP-V----------------TKLL----------S 53 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~-~~~~~-~----------------~~~~----------~ 53 (454)
++||+|||||++|+++|..|++. ++.+|+|+|+.+..++. +.... + ...+ .
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~-~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 117 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKN-PNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKH 117 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTS-TTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred ccCEEEECccHHHHHHHHHHHHc-CCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecC
Confidence 46999999999999999999984 38899999998765321 11000 0 0000 0
Q ss_pred ccchhhhHHHHHhc--CcEEEcc-eEEEEeCcccE---EEec---------cC-----cEEEecEEEEecCCCCCCC
Q psy1545 54 DITVEETDANKFEG--LCTVIVD-TVAAIDPRVNC---VITE---------KQ-----NRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 54 ~~~~~~~~~~~~~~--~i~~~~~-~v~~i~~~~~~---v~~~---------~g-----~~i~~d~lviAtG~~p~~~ 110 (454)
...+.....+.+.+ +++++.+ +|+.+..+... +.+. ++ ..+++|.+|+|+|..+...
T Consensus 118 ~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~ 194 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFG 194 (284)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTT
T ss_pred HHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHH
Confidence 01111223334433 8998755 88888754432 2331 22 5799999999999876543
No 109
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.81 E-value=1.3e-09 Score=109.84 Aligned_cols=174 Identities=14% Similarity=0.100 Sum_probs=98.5
Q ss_pred EecEEEEecCCCCCCCCCC----CceeeeeccchHHHH---------HHH--hhcCCeEEEEcCchhHHHHHHHhc--CC
Q psy1545 95 KYKTLCICTGASPRKIWYS----PHVITIRDTDSVAVL---------QEK--LKSAKKIVVIGNGGIATELVHELS--NV 157 (454)
Q Consensus 95 ~~d~lviAtG~~p~~~~~~----~~~~~~~~~~~~~~l---------~~~--~~~~~~vvVvG~G~~g~e~a~~l~--g~ 157 (454)
.||++++++|++|+.+++. +.+.......+..++ ... .....+|+|||||+.|+.+|..|+ |.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G~ 116 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLGA 116 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCCC
Confidence 4788999999998776654 333333344444444 111 123578999999999999999986 99
Q ss_pred cEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCC-CccccccccccCccCCceEEEeC
Q psy1545 158 DIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLG-PDWHTQVNLHGSSRDTKITIEYS 236 (454)
Q Consensus 158 ~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~l~~~gv~i~~~ 236 (454)
+|+++++.+.+..... ........+.+... .+...........+ ..+. .++.. .+.+.+++.||+++++
T Consensus 117 ~V~liEk~~~~g~~~~-~~~~~~~~~~l~~~------g~~~~~~~~~~~~~-~~~~~~~l~~--~L~~~~~~~gv~v~~~ 186 (497)
T 2bry_A 117 RVVLVEKRIKFSRHNV-LHLWPFTIHDLRAL------GAKKFYGRFCTGTL-DHISIRQLQL--LLLKVALLLGVEIHWG 186 (497)
T ss_dssp EEEEEESCSSCCCCCE-EECCHHHHHHHHTT------THHHHCTTTTCTTC-CEEEHHHHHH--HHHHHHHHTTCEEEES
T ss_pred eEEEEEeccccCCCCc-ccCChhHHHHHHHc------CCcccccccccccc-ccCCHHHHHH--HHHHHHHhCCCEEEeC
Confidence 9999998876421100 00011111111110 00000000000000 0000 01111 1233445579999999
Q ss_pred ceEEEEEcCCCCccceEEEe--c-CC--cEEecCEEEEeeccCcCcc
Q psy1545 237 CEVERIVDSEDDTCNAYVKL--T-NG--HTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 237 ~~v~~i~~~~~~~~~~~v~~--~-~g--~~~~~D~vi~a~G~~p~~~ 278 (454)
+.|+++..+++.+..+.+.+ . +| .++.+|.||.|+|..+...
T Consensus 187 ~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 187 VKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp CEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred CEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 99999986421122456666 3 55 5799999999999988654
No 110
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.80 E-value=1.8e-08 Score=100.27 Aligned_cols=106 Identities=16% Similarity=0.265 Sum_probs=69.1
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc--------cccc------c----ccc--c-----c---
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV--------TKTV------P----VTK--L-----L--- 52 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~--------~~~~------~----~~~--~-----~--- 52 (454)
|++||+|||||++|+++|..|++. |.+|+|+|+.+..+.. .+.. . +.. . +
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~--G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEE--GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIF 102 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC--CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhc
Confidence 568999999999999999999998 8999999998754210 0000 0 000 0 0
Q ss_pred c-------------c----------------cchhhhHHHHHhc-CcEEEc-ceEEEEeCccc---EEEeccCcEEEecE
Q psy1545 53 S-------------D----------------ITVEETDANKFEG-LCTVIV-DTVAAIDPRVN---CVITEKQNRIKYKT 98 (454)
Q Consensus 53 ~-------------~----------------~~~~~~~~~~~~~-~i~~~~-~~v~~i~~~~~---~v~~~~g~~i~~d~ 98 (454)
. . ..+.....+.+.+ +++++. .+|+.+..+.. .|.+.+|+.+++|.
T Consensus 103 ~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~ 182 (447)
T 2i0z_A 103 NNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNH 182 (447)
T ss_dssp CHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSC
T ss_pred CHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCE
Confidence 0 0 0011112223333 899875 48888864332 46677777799999
Q ss_pred EEEecCCCCC
Q psy1545 99 LCICTGASPR 108 (454)
Q Consensus 99 lviAtG~~p~ 108 (454)
||+|||....
T Consensus 183 VVlAtGg~s~ 192 (447)
T 2i0z_A 183 VVIAVGGKSV 192 (447)
T ss_dssp EEECCCCSSS
T ss_pred EEECCCCCcC
Confidence 9999998763
No 111
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.80 E-value=3.7e-10 Score=116.69 Aligned_cols=59 Identities=17% Similarity=0.276 Sum_probs=43.7
Q ss_pred cCCceEEEeCceEEEEEcCCCCccceEEEec---CC--cEEecCEEEEeeccCcCcccccCCCCc
Q psy1545 227 RDTKITIEYSCEVERIVDSEDDTCNAYVKLT---NG--HTHACDIVVSAIGVVPNSNIQVHGTPF 286 (454)
Q Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~---~g--~~~~~D~vi~a~G~~p~~~~~~~~~~l 286 (454)
++.|+++++++.|+++..++++.....|++. +| .++++|.||+|+|..|+.. ++..+|+
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~-lL~~sgi 334 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQ-LLVNSGF 334 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHH-HHHTTTS
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHH-HHHhcCC
Confidence 4469999999999999865421234556554 35 3689999999999999988 6665554
No 112
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.78 E-value=2.2e-08 Score=102.19 Aligned_cols=143 Identities=13% Similarity=0.093 Sum_probs=88.7
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC-cccccccccc---------------ccc---------------
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG-IVKAVTKTVP---------------VTK--------------- 50 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~-~~~~~~~~~~---------------~~~--------------- 50 (454)
++||+|||||+||++||..|++. |.+|+|+|+.+ ..+.....+. +..
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~--G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARG--GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECccHHHHHHHHHHHHC--CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhh
Confidence 58999999999999999999998 89999999974 1211100000 000
Q ss_pred -------cc-------cccchhhhHHHHHhc--CcEEEcceEEEEeCcccE---EEeccCcEEEecEEEEecCCCCCCCC
Q psy1545 51 -------LL-------SDITVEETDANKFEG--LCTVIVDTVAAIDPRVNC---VITEKQNRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 51 -------~~-------~~~~~~~~~~~~~~~--~i~~~~~~v~~i~~~~~~---v~~~~g~~i~~d~lviAtG~~p~~~~ 111 (454)
.. ....+.....+.+.+ +++++.++|+.+..+... |.+.+|..+.+|.+|+|||+.+..+.
T Consensus 99 l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~i 178 (641)
T 3cp8_A 99 LNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGLI 178 (641)
T ss_dssp ECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBTCEE
T ss_pred cccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCCccc
Confidence 00 000111222333443 889888889887654432 56677889999999999999875433
Q ss_pred CCCceeeeeccchHHHHHHHhhcCCeEEEEcCchhHHHHHHHhc--CCcEEEEEe
Q psy1545 112 YSPHVITIRDTDSVAVLQEKLKSAKKIVVIGNGGIATELVHELS--NVDIVWVVK 164 (454)
Q Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~ 164 (454)
+.+.. .. .+.+++ |+.++++++..|. |.+|..+..
T Consensus 179 ~~G~~-~~--------------~~g~~v---G~~~a~~la~~L~~~G~kv~~l~t 215 (641)
T 3cp8_A 179 HIGMD-HF--------------PGGRST---AEPPVEGLTESLASLGFSFGRLKT 215 (641)
T ss_dssp EETTE-EE--------------ECSSST---TSCCBCSHHHHHHHTTCCEEEEEE
T ss_pred eeeee-ee--------------cccccc---CCchhhhhHHHHHhCCceEEeecC
Confidence 21110 00 012221 3567788887775 888876643
No 113
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.77 E-value=1.4e-08 Score=102.25 Aligned_cols=107 Identities=13% Similarity=0.026 Sum_probs=70.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccc---c--------------------ccccchh
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTK---L--------------------LSDITVE 58 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~---~--------------------~~~~~~~ 58 (454)
.+||+|||||++|+++|..|++. |.+|+|||+.+..+.+......+. . +....+.
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~--G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~ 169 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALL--GARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQ 169 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHH
T ss_pred CCCEEEECccHHHHHHHHHHHHC--CCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHH
Confidence 47999999999999999999998 899999999876543211100000 0 0001111
Q ss_pred hhHHHHHhc-CcEEEcc-eEEEEeCc-----ccEEEe--c-cC--cEEEecEEEEecCCCCCCC
Q psy1545 59 ETDANKFEG-LCTVIVD-TVAAIDPR-----VNCVIT--E-KQ--NRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 59 ~~~~~~~~~-~i~~~~~-~v~~i~~~-----~~~v~~--~-~g--~~i~~d~lviAtG~~p~~~ 110 (454)
....+.+.+ +++++.+ +|+.+..+ ...|.+ . +| .++.+|+||+|+|..+...
T Consensus 170 ~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 170 LLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp HHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 222333344 8998755 88888753 235655 3 45 4699999999999976553
No 114
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.74 E-value=2.5e-08 Score=100.87 Aligned_cols=105 Identities=18% Similarity=0.136 Sum_probs=69.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccc--------------------------cccccc--c----cc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVK--------------------------AVTKTV--P----VT 49 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~--------------------------~~~~~~--~----~~ 49 (454)
++||+|||||++|+++|+.|++. |.+|+|+|+.+... +...+. . +.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~--G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQM--GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHT--TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 47999999999999999999997 89999999986431 000000 0 00
Q ss_pred c--c-------------cc---------c------cchhhhHHHHHhc-CcEEEcc-eEEEEeCccc---EEEeccCcEE
Q psy1545 50 K--L-------------LS---------D------ITVEETDANKFEG-LCTVIVD-TVAAIDPRVN---CVITEKQNRI 94 (454)
Q Consensus 50 ~--~-------------~~---------~------~~~~~~~~~~~~~-~i~~~~~-~v~~i~~~~~---~v~~~~g~~i 94 (454)
. . .. . ..+.....+.+.+ +++++.+ +|+.+..+.. .|.+.+|+++
T Consensus 185 ~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i 264 (549)
T 3nlc_A 185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI 264 (549)
T ss_dssp CTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEE
T ss_pred cccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEE
Confidence 0 0 00 0 0011112233334 8999865 8888865443 3677788899
Q ss_pred EecEEEEecCCCCC
Q psy1545 95 KYKTLCICTGASPR 108 (454)
Q Consensus 95 ~~d~lviAtG~~p~ 108 (454)
.+|.||+|+|..++
T Consensus 265 ~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 265 KSRHVVLAVGHSAR 278 (549)
T ss_dssp ECSCEEECCCTTCH
T ss_pred ECCEEEECCCCChh
Confidence 99999999999774
No 115
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.74 E-value=5.4e-08 Score=92.73 Aligned_cols=37 Identities=35% Similarity=0.466 Sum_probs=33.7
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
|++||+|||||++|+++|..|++. |.+|+|+|+.+..
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~--G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSRGS 37 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CCceEEEECCcHHHHHHHHHHHHC--CCcEEEEECCCCC
Confidence 788999999999999999999998 8999999998654
No 116
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.71 E-value=3.9e-08 Score=95.71 Aligned_cols=37 Identities=19% Similarity=0.312 Sum_probs=33.3
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
=+|||+||||||||+++|+.|++. |++|+|+|+.+..
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~--G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKY--GLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCCC
Confidence 059999999999999999999998 9999999997654
No 117
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.69 E-value=3e-07 Score=88.57 Aligned_cols=48 Identities=8% Similarity=0.143 Sum_probs=39.1
Q ss_pred cCCceEEEeCceEEEEEcCCCCccceEEEecCC--cEEecCEEEEeeccCcC
Q psy1545 227 RDTKITIEYSCEVERIVDSEDDTCNAYVKLTNG--HTHACDIVVSAIGVVPN 276 (454)
Q Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~D~vi~a~G~~p~ 276 (454)
++.|++++++++|+++..+++ ..+.+.+++| .++.+|.||+|+|....
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~~~--~~~~v~~~~g~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 161 ESDGAQLVFHTPLIAGRVRPE--GGFELDFGGAEPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp HHTTCEEECSCCEEEEEECTT--SSEEEEECTTSCEEEEEEEEEECCGGGHH
T ss_pred HHCCCEEECCCEEEEEEEcCC--ceEEEEECCCceeEEEeCEEEECCCcchH
Confidence 348999999999999987653 2366788887 58999999999998753
No 118
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.69 E-value=8.9e-08 Score=93.50 Aligned_cols=106 Identities=16% Similarity=0.134 Sum_probs=69.0
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc------c-ccccc--------------------c--c--c-
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV------K-AVTKT--------------------V--P--V- 48 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~------~-~~~~~--------------------~--~--~- 48 (454)
|++||+|||||++|+++|..|++. |.+|+|+|+.+.. . +.... + . +
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 78 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKA--GIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIA 78 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHH--TCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEE
T ss_pred CCccEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEE
Confidence 789999999999999999999998 8999999998641 0 00000 0 0 0
Q ss_pred -ccc---c--------------cccchhhhHHHHHhc-CcEEEcc-eEEEEeCc---ccEEEe-ccCc--EEEecEEEEe
Q psy1545 49 -TKL---L--------------SDITVEETDANKFEG-LCTVIVD-TVAAIDPR---VNCVIT-EKQN--RIKYKTLCIC 102 (454)
Q Consensus 49 -~~~---~--------------~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~~~---~~~v~~-~~g~--~i~~d~lviA 102 (454)
... + ....+.....+.+.+ +++++.+ +++.+..+ ...|++ .+|+ ++++|.||.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~A 158 (394)
T 1k0i_A 79 FAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGC 158 (394)
T ss_dssp ETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEEC
T ss_pred ECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEEC
Confidence 000 0 000011112222333 8888765 88888754 246666 6776 7999999999
Q ss_pred cCCCCC
Q psy1545 103 TGASPR 108 (454)
Q Consensus 103 tG~~p~ 108 (454)
+|....
T Consensus 159 dG~~S~ 164 (394)
T 1k0i_A 159 DGFHGI 164 (394)
T ss_dssp CCTTCS
T ss_pred CCCCcH
Confidence 998643
No 119
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.68 E-value=8.2e-08 Score=94.58 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~--G~~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKS--GFKVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCC
Confidence 48999999999999999999998 899999999863
No 120
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.67 E-value=3.3e-07 Score=89.15 Aligned_cols=38 Identities=24% Similarity=0.275 Sum_probs=35.0
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVK 40 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~ 40 (454)
|++||+|||||++|+++|+.|++. |.+|+|||+.+...
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~--G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQ--GVKTLLVDAFDPPH 39 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCCC
Confidence 678999999999999999999998 89999999987654
No 121
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.67 E-value=1.7e-07 Score=94.54 Aligned_cols=49 Identities=18% Similarity=0.147 Sum_probs=39.2
Q ss_pred CccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 225 SSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 225 ~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
.+++.|++|++++.|++|..++ ++...|+++||+++.+|.||.+++...
T Consensus 230 ~~~~~Gg~I~~~~~V~~I~~~~--~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 230 LFQDLGGEVVLNARVSHMETTG--NKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSCEEECCC---
T ss_pred HHHHhCCceeeecceeEEEeeC--CeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 3456899999999999998766 345679999999999999999876543
No 122
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.66 E-value=1.2e-07 Score=92.85 Aligned_cols=104 Identities=17% Similarity=0.219 Sum_probs=67.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc---cccc---------------------c------c---
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV---TKTV---------------------P------V--- 48 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~---~~~~---------------------~------~--- 48 (454)
++||+|||||++|+++|..|++. |.+|+|+|+.+..... .... . +
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ--GHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHD 83 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred cCCEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCC
Confidence 37999999999999999999998 8999999997643100 0000 0 0
Q ss_pred ccccccc-----------------chhhhHHHHHhc--CcEEEcc-eEEEEeCcc--c--EEEeccCcEEEecEEEEecC
Q psy1545 49 TKLLSDI-----------------TVEETDANKFEG--LCTVIVD-TVAAIDPRV--N--CVITEKQNRIKYKTLCICTG 104 (454)
Q Consensus 49 ~~~~~~~-----------------~~~~~~~~~~~~--~i~~~~~-~v~~i~~~~--~--~v~~~~g~~i~~d~lviAtG 104 (454)
......+ .+.....+.+.+ +++++.+ +|+.++.+. . .|++.+|+++++|.||.|+|
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG 163 (399)
T 2x3n_A 84 GELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADG 163 (399)
T ss_dssp TEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCC
T ss_pred CCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCC
Confidence 0000000 111112223333 6888754 888886543 3 67777888999999999999
Q ss_pred CCC
Q psy1545 105 ASP 107 (454)
Q Consensus 105 ~~p 107 (454)
...
T Consensus 164 ~~s 166 (399)
T 2x3n_A 164 IAS 166 (399)
T ss_dssp TTC
T ss_pred CCh
Confidence 754
No 123
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.64 E-value=6.7e-08 Score=96.29 Aligned_cols=35 Identities=40% Similarity=0.504 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~--G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRR--GLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSS--SCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCC
Confidence 58999999999999999999998 999999999865
No 124
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.60 E-value=1.6e-07 Score=89.75 Aligned_cols=101 Identities=13% Similarity=0.097 Sum_probs=65.6
Q ss_pred ccEEEECCCHHHHHHHHHHhh---cCCCCeEEEECCCCcccccccccc----------cc-ccc---c------------
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAF---LHPGESIGLVTPSGIVKAVTKTVP----------VT-KLL---S------------ 53 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~---~~~g~~v~lie~~~~~~~~~~~~~----------~~-~~~---~------------ 53 (454)
+||+|||||++|+++|+.|++ . |.+|+|+|+++..++...... .. ..+ .
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~--G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 79 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG--PLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDE 79 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C--CEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC--CceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHH
Confidence 699999999999999999999 6 899999999865433111000 00 000 0
Q ss_pred --------c----------------c---chhhhHHHHHhc--CcEEEcc-eEEEEeCcc--cEEEeccCcEEEecEEEE
Q psy1545 54 --------D----------------I---TVEETDANKFEG--LCTVIVD-TVAAIDPRV--NCVITEKQNRIKYKTLCI 101 (454)
Q Consensus 54 --------~----------------~---~~~~~~~~~~~~--~i~~~~~-~v~~i~~~~--~~v~~~~g~~i~~d~lvi 101 (454)
. + .-.....+.+.+ +++++.+ +|+.+..+. ..|.+.+|+.+.+|+||+
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~ 159 (342)
T 3qj4_A 80 LLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVL 159 (342)
T ss_dssp HHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEE
T ss_pred HHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEE
Confidence 0 0 000122333333 7787654 888887544 356666777789999999
Q ss_pred ecCC
Q psy1545 102 CTGA 105 (454)
Q Consensus 102 AtG~ 105 (454)
|+..
T Consensus 160 A~p~ 163 (342)
T 3qj4_A 160 TMPV 163 (342)
T ss_dssp CSCH
T ss_pred CCCH
Confidence 9864
No 125
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.60 E-value=1.2e-07 Score=92.48 Aligned_cols=36 Identities=19% Similarity=0.339 Sum_probs=33.3
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++||+|||||++|+++|..|++. |.+|+|+|+.+..
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~--G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY--GLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSST
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCCC
Confidence 58999999999999999999998 8999999998743
No 126
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.60 E-value=1.2e-07 Score=96.83 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=65.4
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc-------------------cc---------ccc-cccc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV-------------------TK---------TVP-VTKL 51 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~-------------------~~---------~~~-~~~~ 51 (454)
|++||+|||||++|+++|..|++. |.+|+|||+.+..... +. ... +...
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~--G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 125 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG--GVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGI 125 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT--TCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCc
Confidence 457999999999999999999998 9999999997543100 00 000 0000
Q ss_pred ----c--c--------cc-----chhhhHHHHHhc-CcEEEcc-eEEEEeCccc--EEEe--ccC-cEEEecEEEEecCC
Q psy1545 52 ----L--S--------DI-----TVEETDANKFEG-LCTVIVD-TVAAIDPRVN--CVIT--EKQ-NRIKYKTLCICTGA 105 (454)
Q Consensus 52 ----~--~--------~~-----~~~~~~~~~~~~-~i~~~~~-~v~~i~~~~~--~v~~--~~g-~~i~~d~lviAtG~ 105 (454)
+ . .. .+.....+.+.+ +++++.+ +|+.++.+.. .|++ .+| +++++|+||.|.|.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 126 FTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGG 205 (570)
T ss_dssp CTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCS
T ss_pred ccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCC
Confidence 0 0 00 011112223333 8888755 8888876543 4555 567 68999999999997
Q ss_pred C
Q psy1545 106 S 106 (454)
Q Consensus 106 ~ 106 (454)
+
T Consensus 206 ~ 206 (570)
T 3fmw_A 206 R 206 (570)
T ss_dssp S
T ss_pred C
Confidence 5
No 127
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.60 E-value=3.1e-08 Score=91.03 Aligned_cols=39 Identities=33% Similarity=0.437 Sum_probs=35.7
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKA 41 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~ 41 (454)
|++||+||||||||++||..|++. |.+|+|+|+++.+++
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~--G~~V~v~Ek~~~~GG 39 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSRGSGG 39 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCCCCC
Confidence 899999999999999999999998 999999999987654
No 128
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.58 E-value=2.7e-07 Score=90.21 Aligned_cols=104 Identities=8% Similarity=0.011 Sum_probs=66.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc-cc---cccc-cc-------ccc-------------cc---c
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV-KA---VTKT-VP-------VTK-------------LL---S 53 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~-~~---~~~~-~~-------~~~-------------~~---~ 53 (454)
++||+|||||++|+++|..|++. |.+|+|+|+.+.. .. .... +. +.. .. .
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDA--GVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALT 82 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTT
T ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCC
Confidence 47999999999999999999998 9999999998653 10 0000 00 000 00 0
Q ss_pred c-----c-----ch-hhhHHHHHhc---CcEEEcc-eEEEEeCcc--cEEEeccCcEEEecEEEEecCCCC
Q psy1545 54 D-----I-----TV-EETDANKFEG---LCTVIVD-TVAAIDPRV--NCVITEKQNRIKYKTLCICTGASP 107 (454)
Q Consensus 54 ~-----~-----~~-~~~~~~~~~~---~i~~~~~-~v~~i~~~~--~~v~~~~g~~i~~d~lviAtG~~p 107 (454)
. . .. .....+.+.+ +++++.+ +|+.+..+. ..|++.+|+++.+|.||.|+|...
T Consensus 83 g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 83 GERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp CCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred CCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcch
Confidence 0 0 00 0112222222 6777654 888886443 356777888999999999999753
No 129
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.57 E-value=6.4e-07 Score=90.82 Aligned_cols=39 Identities=21% Similarity=0.361 Sum_probs=35.6
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
++||+|||||++|++||..|++. |.+|+|+|+++..++.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~--G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS--GLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT--TCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCCCCc
Confidence 57999999999999999999998 8999999999887654
No 130
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.55 E-value=2.2e-07 Score=89.82 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=33.5
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
|++||+|||||++|+++|++|++. |.+|+|+|+.+..
T Consensus 1 m~~dvvIIG~Gi~Gl~~A~~La~~--G~~V~vle~~~~~ 37 (372)
T 2uzz_A 1 MKYDLIIIGSGSVGAAAGYYATRA--GLNVLMTDAHMPP 37 (372)
T ss_dssp -CEEEEESCTTHHHHHHHHHHHHT--TCCEEEECSSCSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCC
Confidence 789999999999999999999998 8999999997643
No 131
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.54 E-value=1.3e-07 Score=93.83 Aligned_cols=48 Identities=6% Similarity=0.047 Sum_probs=38.8
Q ss_pred cCCceEEEeCc---eEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcC
Q psy1545 227 RDTKITIEYSC---EVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPN 276 (454)
Q Consensus 227 ~~~gv~i~~~~---~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~ 276 (454)
++.|+++++++ .|+++..+++ ....|++.+|+++.+|.||+|+|....
T Consensus 172 ~~~Gv~i~~~t~~~~V~~i~~~~~--~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 172 QRMGVKFVTGTPQGRVVTLIFENN--DVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHTTCEEEESTTTTCEEEEEEETT--EEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HhcCCEEEeCCcCceEEEEEecCC--eEEEEEECCCCEEECCEEEECCCCChh
Confidence 34899999999 9999987542 233488899988999999999998654
No 132
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.54 E-value=3.5e-07 Score=93.77 Aligned_cols=35 Identities=31% Similarity=0.370 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++||+|||||++|+++|..|++. |.+|+|||+.+.
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~--G~~V~LiEr~~~ 57 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKL--GHDVTIYERSAF 57 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHcC--CCCEEEEcCCCC
Confidence 47999999999999999999998 899999999854
No 133
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.54 E-value=3.5e-07 Score=93.05 Aligned_cols=35 Identities=29% Similarity=0.339 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++||+|||||++|+++|+.|++. |.+|+|||+.+.
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~--G~~v~viEr~~~ 39 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQ--GVRVLVVERRPG 39 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT--TCCEEEECSSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 47999999999999999999998 999999999864
No 134
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.53 E-value=2.4e-07 Score=89.91 Aligned_cols=36 Identities=25% Similarity=0.369 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++||+|||||++|+++|+.|++. |.+|+|||+....
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~--G~~V~llE~~~~~ 52 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKE--NKNTALFESGTMG 52 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCCCC
Confidence 47999999999999999999998 8999999997644
No 135
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.52 E-value=3.4e-07 Score=94.02 Aligned_cols=39 Identities=28% Similarity=0.368 Sum_probs=34.3
Q ss_pred CcccEEEECCCHHHHHHHHHHhhc----CCCCeEEEECCCCcc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFL----HPGESIGLVTPSGIV 39 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~----~~g~~v~lie~~~~~ 39 (454)
|++||+|||||+||+++|..|++. ++|.+|+|||+.+..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSST
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCC
Confidence 458999999999999999999986 458899999998654
No 136
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.50 E-value=1.2e-06 Score=86.26 Aligned_cols=38 Identities=18% Similarity=0.351 Sum_probs=34.5
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
+||+|||||++|++||+.|++. |.+|+|+|+++..++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~--G~~V~vlE~~~~~GG~ 38 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA--GHEVEVFERLPITGGR 38 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT--TCEEEEECSSSSSBTT
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCceEEEeCCCCCCCc
Confidence 4899999999999999999998 8999999999877543
No 137
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.50 E-value=7e-07 Score=93.62 Aligned_cols=47 Identities=15% Similarity=0.222 Sum_probs=38.4
Q ss_pred cCCceEEEeCceEEEEEcCCCCccceEEEecCCc-EEecCEEEEeeccCcC
Q psy1545 227 RDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGH-THACDIVVSAIGVVPN 276 (454)
Q Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~-~~~~D~vi~a~G~~p~ 276 (454)
++.|+++++++.|+++..+++ .+.|.+++|. ++.+|.||+|+|....
T Consensus 423 ~~~Gv~i~~~t~V~~l~~~~~---~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 423 QQNGMTCHYQHELQRLKRIDS---QWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHTTCEEEESCCEEEEEECSS---SEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred HhCCCEEEeCCeEeEEEEeCC---eEEEEeCCCcEEEECCEEEECCCcchh
Confidence 347999999999999987663 3678888886 8999999999999744
No 138
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.49 E-value=6.8e-07 Score=91.64 Aligned_cols=37 Identities=19% Similarity=0.306 Sum_probs=33.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVK 40 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~ 40 (454)
++||||||||++|++||..|++. |.+|+|+|+.+..+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~--G~~V~vlEk~~~~g 162 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDS--GAKVILIEKEPVIG 162 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCCC
Confidence 47999999999999999999998 89999999987654
No 139
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.48 E-value=7e-07 Score=90.29 Aligned_cols=33 Identities=27% Similarity=0.505 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
+||+|||||++|+++|..|++. |.+|+|+|+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~--G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMR--GHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--TCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhC--CCCEEEEccCC
Confidence 7999999999999999999998 89999999986
No 140
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.48 E-value=7e-07 Score=85.48 Aligned_cols=121 Identities=14% Similarity=0.120 Sum_probs=71.8
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCC-CCC
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKG-PSL 212 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~l 212 (454)
.+++|||||+.|+.+|..|+ |.+|+++++.+.+-..+... ........... +....... +..
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~---------~~~~~~~~~~~------~~~~~~~~~~~~ 68 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHA---------WHSLHLFSPAG------WSSIPGWPMPAS 68 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGS---------CTTCBCSSCGG------GSCCSSSCCCCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCC---------CCCcEecCchh------hhhCCCCCCCCC
Confidence 47999999999999999996 99999999887543221100 00000000000 00000000 000
Q ss_pred CCccc---cc-cccccCccCCceEEEeCceEEEEEcCCCCccceE-EEecCCcEEecCEEEEeeccCc
Q psy1545 213 GPDWH---TQ-VNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAY-VKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 213 ~~~~~---~~-~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~-v~~~~g~~~~~D~vi~a~G~~p 275 (454)
...+. .. ..+.+..++.|++++.++.|+++...++ .+. +.+++| ++++|.||+|+|..+
T Consensus 69 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~---~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 69 QGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGE---RLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp SSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETT---EEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred ccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCC---cEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 00000 00 0122333557999999999999987653 466 778887 899999999999643
No 141
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.47 E-value=5.4e-07 Score=88.32 Aligned_cols=36 Identities=22% Similarity=0.365 Sum_probs=33.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++||+|||||++|+++|..|++. |.+|+|+|+.+..
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQS--GIDCDVYEAVKEI 58 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCCC
Confidence 47999999999999999999998 9999999998653
No 142
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.47 E-value=4.9e-07 Score=87.71 Aligned_cols=35 Identities=34% Similarity=0.540 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++||+|||||++|+++|+.|++. |.+|+|||++..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~--G~~V~lle~~~~ 39 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR--GEEVTVIEKRFI 39 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSST
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCC
Confidence 47999999999999999999998 899999999854
No 143
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.47 E-value=2.9e-07 Score=96.41 Aligned_cols=47 Identities=15% Similarity=0.249 Sum_probs=39.4
Q ss_pred cCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcC
Q psy1545 227 RDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPN 276 (454)
Q Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~ 276 (454)
++.|+++++++.|+++..+++ .+.|.+.+|.++.+|.||+|+|....
T Consensus 428 ~~~Gv~i~~~t~V~~l~~~~~---~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 428 QQQGLQIYYQYQLQNFSRKDD---CWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHTTCEEEESCCEEEEEEETT---EEEEEETTSCEEEESEEEECCGGGGG
T ss_pred HhCCCEEEeCCeeeEEEEeCC---eEEEEECCCCEEECCEEEECCCcchh
Confidence 347999999999999987653 46788888888999999999998754
No 144
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.46 E-value=7e-07 Score=87.26 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 60 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQN--GIDVSVYERDND 60 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT--TCEEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 36999999999999999999998 899999999764
No 145
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.46 E-value=7.3e-07 Score=89.75 Aligned_cols=104 Identities=15% Similarity=0.160 Sum_probs=66.2
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccc-----------------ccc-----------ccc--
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTK-----------------TVP-----------VTK-- 50 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~-----------------~~~-----------~~~-- 50 (454)
|++||+|||||++|+++|..|++. |.+|+|||+.+....... ... +..
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~--G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 88 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLG--GVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRP 88 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceeccee
Confidence 358999999999999999999998 999999999754311000 000 000
Q ss_pred -c---cc-c----cchhh-----hHHHHHhc-CcEEEcc-eEEEEeCcc--cEEEeccCc---EEEecEEEEecCCC
Q psy1545 51 -L---LS-D----ITVEE-----TDANKFEG-LCTVIVD-TVAAIDPRV--NCVITEKQN---RIKYKTLCICTGAS 106 (454)
Q Consensus 51 -~---~~-~----~~~~~-----~~~~~~~~-~i~~~~~-~v~~i~~~~--~~v~~~~g~---~i~~d~lviAtG~~ 106 (454)
. .. . ..+.+ ...+.+.+ +++++.+ +++.++.+. .++++.++. ++++|+||.|.|.+
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 89 VDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp EEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred cccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 0 00 0 00111 12222333 8888755 888886543 355565654 79999999999975
No 146
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.46 E-value=6e-07 Score=91.96 Aligned_cols=37 Identities=22% Similarity=0.282 Sum_probs=33.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVK 40 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~ 40 (454)
++||||||||++|++||..|++. |.+|+|||+.+..+
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~--G~~V~vlEk~~~~g 157 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKA--GANVILVDKAPFSG 157 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH--TCCEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCCC
Confidence 47999999999999999999998 89999999987654
No 147
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.45 E-value=7.3e-07 Score=89.77 Aligned_cols=103 Identities=15% Similarity=0.137 Sum_probs=65.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccc-----------------cccc-----------cc---
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTK-----------------TVPV-----------TK--- 50 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~-----------------~~~~-----------~~--- 50 (454)
++||+|||||++|+++|..|++. |.+|+|||+.+....... ...+ ..
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~--G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLA--GVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 58999999999999999999998 999999999754311000 0000 00
Q ss_pred c---cc-c----cchhh-----hHHHHHhc-CcEEEcc-eEEEEeCccc--EEEeccCc---EEEecEEEEecCCC
Q psy1545 51 L---LS-D----ITVEE-----TDANKFEG-LCTVIVD-TVAAIDPRVN--CVITEKQN---RIKYKTLCICTGAS 106 (454)
Q Consensus 51 ~---~~-~----~~~~~-----~~~~~~~~-~i~~~~~-~v~~i~~~~~--~v~~~~g~---~i~~d~lviAtG~~ 106 (454)
. .. . ..+.+ ...+.+.+ +++++.+ +++.+..+.. ++++.++. ++++|+||.|.|.+
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 0 00 0 00111 11222333 8888755 8888865443 45555654 79999999999975
No 148
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.45 E-value=7.6e-07 Score=90.84 Aligned_cols=47 Identities=15% Similarity=0.154 Sum_probs=38.5
Q ss_pred C-ceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCc
Q psy1545 229 T-KITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNS 277 (454)
Q Consensus 229 ~-gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~ 277 (454)
. ||+++.+ +|+++..+++ +..+.|.+++|+++.+|.||.|+|.....
T Consensus 207 ~~Gv~i~~~-~V~~i~~~~~-g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 207 KLGVRHVED-RVEHVQRDAN-GNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HSCCEEEEC-CEEEEEECTT-SCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred cCCcEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 6 9999999 9999986442 23467888889889999999999997754
No 149
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.45 E-value=7.5e-07 Score=84.10 Aligned_cols=39 Identities=28% Similarity=0.361 Sum_probs=34.6
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVK 40 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~ 40 (454)
++||+|||||++|+++|+.|++..+|.+|+|+|+.+..+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 479999999999999999999975689999999987554
No 150
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.45 E-value=7e-07 Score=87.31 Aligned_cols=36 Identities=22% Similarity=0.400 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHhh-cCCC-CeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAF-LHPG-ESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-~~~g-~~v~lie~~~~~ 39 (454)
++||+|||||++|+++|++|++ . | .+|+|||+.+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~--G~~~V~vlE~~~~~ 58 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNH--GITNVAVLEKGWLA 58 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH--CCCCEEEECSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHhc--CCCcEEEEeCCCCC
Confidence 4799999999999999999999 8 8 899999998643
No 151
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.41 E-value=2.8e-07 Score=91.64 Aligned_cols=35 Identities=23% Similarity=0.479 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCC-CeEEEECC-CCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPG-ESIGLVTP-SGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g-~~v~lie~-~~~ 38 (454)
++||+|||||++|+++|+.|++. | .+|+|||+ ...
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~--G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVW--SGGSVLVVDAGHAP 59 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH--HCSCEEEEESSSST
T ss_pred cCCEEEECcCHHHHHHHHHHHhC--CCCcEEEEccCCCC
Confidence 57999999999999999999998 7 89999999 543
No 152
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.38 E-value=1.4e-06 Score=85.23 Aligned_cols=35 Identities=26% Similarity=0.380 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++|+||||||+|+++|..|++. |.+|+|+|+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~--G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH--GIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCEEEEecCCCC
Confidence 5899999999999999999998 9999999987643
No 153
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.37 E-value=1.2e-06 Score=87.13 Aligned_cols=97 Identities=18% Similarity=0.222 Sum_probs=73.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||++|+.+|..|++. +.+|+++++.+.+. +. .+.++.....+.+.+ +++++.+ ++..++
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~--g~~V~lv~~~~~~l-----~~-----~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~ 235 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRL--GAEVIVLEYMDRIL-----PT-----MDLEVSRAAERVFKKQGLTIRTGVRVTAVV 235 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSC-----TT-----SCHHHHHHHHHHHHHHTCEEECSCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCEEEEEecCCccc-----cc-----cCHHHHHHHHHHHHHCCCEEEECCEEEEEE
Confidence 4799999999999999999998 89999999987542 11 112233334455555 9999865 898887
Q ss_pred Cccc--EEEeccCcEEEecEEEEecCCCCCCCC
Q psy1545 81 PRVN--CVITEKQNRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~~~--~v~~~~g~~i~~d~lviAtG~~p~~~~ 111 (454)
.+.. .+.+.+++++.+|.||+|+|.+|+.+.
T Consensus 236 ~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 236 PEAKGARVELEGGEVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp EETTEEEEEETTSCEEEESEEEECSCEEECCTT
T ss_pred EeCCEEEEEECCCeEEEcCEEEECcCCCcCCCC
Confidence 6543 345557889999999999999887654
No 154
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.37 E-value=9.2e-07 Score=85.92 Aligned_cols=109 Identities=19% Similarity=0.238 Sum_probs=75.1
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSL 212 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (454)
..|++|||||+.|+.+|..|. +.+|+++++.+.+. +..+.+ ...+... ..
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~--y~~~~l----~~~l~g~-------------------~~--- 60 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP--YYRPRL----NEIIAKN-------------------KS--- 60 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC--BCGGGH----HHHHHSC-------------------CC---
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC--cccChh----hHHHcCC-------------------CC---
Confidence 458999999999999999987 78999999877532 111222 2222110 00
Q ss_pred CCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 213 GPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 213 ~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
..++. ....+.+++.||+++.+++|++++..+ ..+.+++|+++.+|.+|+|||.+|..+
T Consensus 61 ~~~l~--~~~~~~~~~~~i~~~~~~~V~~id~~~-----~~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 61 IDDIL--IKKNDWYEKNNIKVITSEFATSIDPNN-----KLVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp GGGTB--SSCHHHHHHTTCEEECSCCEEEEETTT-----TEEEETTSCEEECSEEEECCCEEECCC
T ss_pred HHHcc--CCCHHHHHHCCCEEEeCCEEEEEECCC-----CEEEECCCCEEECCEEEEecCCCcCCC
Confidence 00000 011222345799999999999998765 257889999999999999999998765
No 155
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.36 E-value=1e-06 Score=86.99 Aligned_cols=105 Identities=21% Similarity=0.186 Sum_probs=72.1
Q ss_pred CCeEEEEcCchhHHHHHHHhc----CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS----NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGP 210 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~----g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (454)
.|+|+|||||+.|+.+|..|+ +.+||++++++.+. +.|..-......+..
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~---~~p~l~~v~~g~~~~----------------------- 55 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG---FTPAFPHLAMGWRKF----------------------- 55 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE---CGGGHHHHHHTCSCG-----------------------
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc---cCccHHHHhcCCCCH-----------------------
Confidence 378999999999999999885 57999999877542 122211111111000
Q ss_pred CCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcC
Q psy1545 211 SLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPN 276 (454)
Q Consensus 211 ~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~ 276 (454)
.++ ...+.+.+++.||+++.+ +|++|+.+++ +|.+++|+++++|.+|+|||.++.
T Consensus 56 ---~~i--~~~~~~~~~~~gv~~i~~-~v~~Id~~~~-----~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 56 ---EDI--SVPLAPLLPKFNIEFINE-KAESIDPDAN-----TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ---GGS--EEESTTTGGGGTEEEECS-CEEEEETTTT-----EEEETTCCEEECSEEEECCCCEEE
T ss_pred ---HHh--hhcHHHHHHHCCcEEEEe-EEEEEECCCC-----EEEECCCCEEECCEEEEeCCCCcc
Confidence 000 011233445679999887 7999987753 588999999999999999998754
No 156
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.35 E-value=1.4e-06 Score=85.53 Aligned_cols=36 Identities=33% Similarity=0.555 Sum_probs=33.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCe-EEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGES-IGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~-v~lie~~~~~ 39 (454)
++||+|||||++|+++|..|++. |.+ |+|+|+.+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~--G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA--GIGKVTLLESSSEI 40 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCCCc
Confidence 58999999999999999999998 899 9999997653
No 157
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.35 E-value=1.1e-06 Score=86.22 Aligned_cols=37 Identities=38% Similarity=0.643 Sum_probs=33.4
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
+||+|||||++|+++|+.|++..||.+|+|||+....
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 7999999999999999999998668899999997543
No 158
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.34 E-value=2.2e-06 Score=86.40 Aligned_cols=36 Identities=25% Similarity=0.377 Sum_probs=32.6
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
.++||+|||||++|+++|+.|+++ |.+|+|+|+++.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~--G~~V~llE~~~~ 37 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGR--GLSVLMLEAQDL 37 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC--CCCEEEEECCCC
Confidence 058999999999999999999998 899999999764
No 159
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.33 E-value=2e-06 Score=83.64 Aligned_cols=96 Identities=18% Similarity=0.211 Sum_probs=72.5
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. ...+.++.....+.+.+ +++++.+ ++..++
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~~~---------~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 214 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSG--GYQLDVVAPCEQVMP---------GLLHPAAAKAVQAGLEGLGVRFHLGPVLASLK 214 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSSSST---------TTSCHHHHHHHHHHHHTTTCEEEESCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCeEEEEecCcchhh---------cccCHHHHHHHHHHHHHcCCEEEeCCEEEEEE
Confidence 4799999999999999999998 899999999765321 01122333444556666 9999865 788887
Q ss_pred Ccc--cEEEeccCcEEEecEEEEecCCCCCC
Q psy1545 81 PRV--NCVITEKQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~~~--~~v~~~~g~~i~~d~lviAtG~~p~~ 109 (454)
.+. ..+.+.+|+++.+|.+|+|+|.+|..
T Consensus 215 ~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 215 KAGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred ecCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 543 35667788899999999999988754
No 160
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.33 E-value=1.2e-06 Score=85.56 Aligned_cols=106 Identities=16% Similarity=0.138 Sum_probs=71.9
Q ss_pred CCeEEEEcCchhHHHHHHHhc----CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS----NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGP 210 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~----g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (454)
+|||+|||+|+.|+.+|..|+ +.+|+++++++.+.. .+.....+......
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~---~p~~~~v~~g~~~~----------------------- 55 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYT---CYMSNEVIGGDREL----------------------- 55 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEEC---STTHHHHHHTSSCG-----------------------
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCC---ccCHHHHhcCCCCH-----------------------
Confidence 799999999999999998875 568999998775321 12111111100000
Q ss_pred CCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 211 SLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 211 ~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
.++ ....+.+.+.||+++.+ .|++|+.+. ..+.+.+|.++++|.+++|+|.+++.+
T Consensus 56 ---~~~---~~~~~~~~~~gv~~i~~-~v~~id~~~-----~~v~~~~g~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 56 ---ASL---RVGYDGLRAHGIQVVHD-SALGIDPDK-----KLVKTAGGAEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp ---GGG---EECSHHHHHTTCEEECS-CEEEEETTT-----TEEEETTSCEEECSEEEECCCEEECGG
T ss_pred ---HHH---hhCHHHHHHCCCEEEEe-EEEEEEccC-----cEEEecccceeecceeeeccCCccccC
Confidence 000 00112234479999877 788998765 357889999999999999999998765
No 161
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.31 E-value=1.7e-06 Score=88.05 Aligned_cols=37 Identities=27% Similarity=0.336 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcC-CCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLH-PGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~-~g~~v~lie~~~~ 38 (454)
.+||+|||||++|+++|..|++.. .|.+|+|||+.+.
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 479999999999999999999921 2899999999653
No 162
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.31 E-value=2.2e-06 Score=85.08 Aligned_cols=96 Identities=19% Similarity=0.271 Sum_probs=72.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||++|+.+|..|++. +.+|+++++.+.+... ..+.++.....+.+.+ +++++.+ ++..++
T Consensus 150 ~~vvIiG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~~---------~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 218 (447)
T 1nhp_A 150 NNVVVIGSGYIGIEAAEAFAKA--GKKVTVIDILDRPLGV---------YLDKEFTDVLTEEMEANNITIATGETVERYE 218 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSSTTTT---------TCCHHHHHHHHHHHHTTTEEEEESCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCeEEEEecCcccccc---------cCCHHHHHHHHHHHHhCCCEEEcCCEEEEEE
Confidence 5799999999999999999998 8999999998753210 0112333444555666 9999865 888888
Q ss_pred Cccc--EEEeccCcEEEecEEEEecCCCCCCC
Q psy1545 81 PRVN--CVITEKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~~--~v~~~~g~~i~~d~lviAtG~~p~~~ 110 (454)
.+.+ .+.+ ++.++.+|.+|+|+|.+|+.+
T Consensus 219 ~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~ 249 (447)
T 1nhp_A 219 GDGRVQKVVT-DKNAYDADLVVVAVGVRPNTA 249 (447)
T ss_dssp CSSBCCEEEE-SSCEEECSEEEECSCEEESCG
T ss_pred ccCcEEEEEE-CCCEEECCEEEECcCCCCChH
Confidence 6543 3555 567899999999999988754
No 163
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.30 E-value=2.5e-06 Score=83.63 Aligned_cols=94 Identities=17% Similarity=0.233 Sum_probs=71.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. . ..+.++.....+.+.+ +++++.+ ++..++
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~l~--------~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 214 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTA--GVHVSLVETQPRLMS--------R-AAPATLADFVARYHAAQGVDLRFERSVTGSV 214 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSSSST--------T-TSCHHHHHHHHHHHHHTTCEEEESCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEEeCCcccc--------c-ccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE
Confidence 4799999999999999999998 899999999875321 0 0112233334455555 9999865 888888
Q ss_pred CcccEEEeccCcEEEecEEEEecCCCCCC
Q psy1545 81 PRVNCVITEKQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~~~~~v~~~~g~~i~~d~lviAtG~~p~~ 109 (454)
+. .|.+.+|+++.+|.+|+|+|.+|..
T Consensus 215 -~~-~v~~~~g~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 215 -DG-VVLLDDGTRIAADMVVVGIGVLAND 241 (408)
T ss_dssp -TT-EEEETTSCEEECSEEEECSCEEECC
T ss_pred -CC-EEEECCCCEEEcCEEEECcCCCccH
Confidence 43 7888888899999999999988754
No 164
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.29 E-value=2.2e-06 Score=83.64 Aligned_cols=36 Identities=17% Similarity=0.365 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++||+|||||++|+++|+.|++. |.+|+|+|+.+..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~--G~~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER--GHRVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCC
Confidence 47999999999999999999998 8999999997643
No 165
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.29 E-value=1.8e-06 Score=87.20 Aligned_cols=36 Identities=28% Similarity=0.329 Sum_probs=31.6
Q ss_pred CcccEEEECCCHHHHHHHHHHhh---cCCCCeEEEECCCCc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAF---LHPGESIGLVTPSGI 38 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~---~~~g~~v~lie~~~~ 38 (454)
|.+||||||||++|+++|..|++ . |.+|+|||+.+.
T Consensus 1 m~~dVvIVGgG~aGl~~A~~La~~~~~--G~~V~lvE~~~~ 39 (511)
T 2weu_A 1 MIRSVVIVGGGTAGWMTASYLKAAFDD--RIDVTLVESGNV 39 (511)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHGG--GSEEEEEEC---
T ss_pred CcceEEEECCCHHHHHHHHHHHhhcCC--CCEEEEEecCCC
Confidence 77899999999999999999999 7 899999998743
No 166
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.29 E-value=5.5e-06 Score=77.75 Aligned_cols=39 Identities=21% Similarity=0.252 Sum_probs=34.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVK 40 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~ 40 (454)
.+||+|||||++|+++|..|++..++.+|+|+|+.+..+
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~g 103 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccc
Confidence 369999999999999999999976789999999987654
No 167
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.28 E-value=2.1e-06 Score=83.01 Aligned_cols=34 Identities=32% Similarity=0.407 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++||+|||||++|+++|++|+ + |.+|+|+|+.+.
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~--G~~V~vlE~~~~ 42 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A--HGRVVVLEREAQ 42 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T--TSCEEEECSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C--CCCEEEEECCCC
Confidence 479999999999999999999 5 899999999853
No 168
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.27 E-value=1.5e-06 Score=82.33 Aligned_cols=118 Identities=13% Similarity=0.059 Sum_probs=73.3
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSL 212 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (454)
..+++|||||+.|+.+|..|+ |.+|+++++.+.+-..+ ...... ..+.....+...-
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~---------~~~~~~------------~~~~~~~~~~~~~ 65 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL---------SALYPE------------KYIYDVAGFPKIR 65 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH---------HHHCTT------------SEECCSTTCSSEE
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee---------hhcCCC------------ceEeccCCCCCCC
Confidence 368999999999999999886 99999999876533111 000000 0000000000000
Q ss_pred CCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeecc---CcCcc
Q psy1545 213 GPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGV---VPNSN 278 (454)
Q Consensus 213 ~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~---~p~~~ 278 (454)
..++.. .+.+.+++.|+++++++.|.++...++ ..+.+.+++|+ +.+|.||+|+|. .|...
T Consensus 66 ~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 66 AQELIN--NLKEQMAKFDQTICLEQAVESVEKQAD--GVFKLVTNEET-HYSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp HHHHHH--HHHHHHTTSCCEEECSCCEEEEEECTT--SCEEEEESSEE-EEEEEEEECCTTSCCEECCC
T ss_pred HHHHHH--HHHHHHHHhCCcEEccCEEEEEEECCC--CcEEEEECCCE-EEeCEEEECCCCCcCCCCCC
Confidence 000000 122333557999999999999987652 25678888876 999999999999 66543
No 169
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.26 E-value=2.5e-06 Score=84.96 Aligned_cols=95 Identities=16% Similarity=0.251 Sum_probs=71.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. .+ +.++.....+.+.+ +++++.+ ++..++
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 239 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKL--GAQVSVVEARERILP-----TY-----DSELTAPVAESLKKLGIALHLGHSVEGYE 239 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSSST-----TS-----CHHHHHHHHHHHHHHTCEEETTCEEEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCCcccc-----cc-----CHHHHHHHHHHHHHCCCEEEECCEEEEEE
Confidence 4799999999999999999998 899999999875421 11 12233334455555 9999865 899998
Q ss_pred CcccEEEec--cC--cEEEecEEEEecCCCCCCCC
Q psy1545 81 PRVNCVITE--KQ--NRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~~~~v~~~--~g--~~i~~d~lviAtG~~p~~~~ 111 (454)
. .. +.+. +| +++.+|.+|+|+|.+|+.+.
T Consensus 240 ~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 240 N-GC-LLANDGKGGQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp T-TE-EEEECSSSCCCEECCSCEEECCCEEECCSS
T ss_pred e-CC-EEEEECCCceEEEECCEEEECcCCCcCCCC
Confidence 7 33 4333 45 58999999999999887654
No 170
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.26 E-value=4.9e-06 Score=84.03 Aligned_cols=37 Identities=24% Similarity=0.235 Sum_probs=33.7
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVK 40 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~ 40 (454)
++||||||||++|++||..|++. |.+|+|||+.+..+
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~--G~~V~vlEk~~~~G 77 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARA--GADVLVLERTSGWG 77 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCCC
Confidence 47999999999999999999998 89999999987653
No 171
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.25 E-value=1.8e-06 Score=81.99 Aligned_cols=114 Identities=12% Similarity=0.080 Sum_probs=70.7
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCC----CccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDK----HISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEK 208 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~----~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (454)
.++++|||+|+.|+.+|..|+ |.+|+++++.+ .+-..+.... .+.....+
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~------------------------~~~~~~~~ 77 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT------------------------EIENFPGF 77 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS------------------------EECCSTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch------------------------hhcccCCC
Confidence 578999999999999999997 99999999854 1111000000 00000000
Q ss_pred CCCCC-CccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEe---cCCcEEecCEEEEeeccCcCcc
Q psy1545 209 GPSLG-PDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL---TNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 209 ~~~l~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~---~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
...+. .++.. .+.+.+++.|++++.++ +.++...++ .+.+.+ .++.++.+|.+|+|+|.+|...
T Consensus 78 ~~~~~~~~~~~--~~~~~~~~~gv~i~~~~-v~~i~~~~~---~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 78 PDGLTGSELMD--RMREQSTKFGTEIITET-VSKVDLSSK---PFKLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp TTCEEHHHHHH--HHHHHHHHTTCEEECSC-EEEEECSSS---SEEEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred cccCCHHHHHH--HHHHHHHHcCCEEEEeE-EEEEEEcCC---EEEEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 00000 00000 12233355799999998 999987653 466666 3667899999999999988754
No 172
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.25 E-value=3.9e-06 Score=83.32 Aligned_cols=96 Identities=16% Similarity=0.080 Sum_probs=73.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. .+ +.+......+.+.+ +++++.+ ++..++
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 235 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGL--GAKTHLFEMFDAPLP-----SF-----DPMISETLVEVMNAEGPQLHTNAIPKAVV 235 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSST-----TS-----CHHHHHHHHHHHHHHSCEEECSCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCEEEEEEeCCchhh-----hh-----hHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 4799999999999999999998 899999999865321 11 11233334455555 9999865 888887
Q ss_pred Ccc---cEEEeccCcEEEecEEEEecCCCCCCC
Q psy1545 81 PRV---NCVITEKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~---~~v~~~~g~~i~~d~lviAtG~~p~~~ 110 (454)
.+. ..+.+.+|+.+.+|.+|+|+|.+|...
T Consensus 236 ~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 236 KNTDGSLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp ECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred EeCCcEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 542 367777888999999999999988764
No 173
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.24 E-value=4e-06 Score=83.61 Aligned_cols=97 Identities=18% Similarity=0.200 Sum_probs=71.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+|+++.+.+.. . .+.++.....+.+.+ +++++.+ ++..++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~-----~-----~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~ 237 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRL--GAEVTLIEYMPEILP-----Q-----GDPETAALLRRALEKEGIRVRTKTKAVGYE 237 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSST-----T-----SCHHHHHHHHHHHHHTTCEEECSEEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEEEcCCcccc-----c-----cCHHHHHHHHHHHHhcCCEEEcCCEEEEEE
Confidence 4799999999999999999998 899999999875421 1 112233334455555 9999866 888887
Q ss_pred Cccc--EEEec-c--Cc--EEEecEEEEecCCCCCCCC
Q psy1545 81 PRVN--CVITE-K--QN--RIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~~~--~v~~~-~--g~--~i~~d~lviAtG~~p~~~~ 111 (454)
.+.. .+.+. + |+ ++.+|.+|+|+|.+|....
T Consensus 238 ~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 238 KKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTT
T ss_pred EeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCC
Confidence 5443 45554 5 76 8999999999999887653
No 174
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.23 E-value=3.7e-06 Score=82.45 Aligned_cols=96 Identities=18% Similarity=0.246 Sum_probs=72.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. . ..+........+.+.+ +++++.+ .+..++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtvv~~~~~~l~--------~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 212 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKL--GLSVTILEAGDELLV--------R-VLGRRIGAWLRGLLTELGVQVELGTGVVGFS 212 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSSH--------H-HHCHHHHHHHHHHHHHHTCEEECSCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCccch--------h-hcCHHHHHHHHHHHHHCCCEEEeCCEEEEEe
Confidence 4799999999999999999998 899999999875421 0 0011233334445555 9999854 888888
Q ss_pred Cccc--EEEeccCcEEEecEEEEecCCCCCC
Q psy1545 81 PRVN--CVITEKQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~~~~--~v~~~~g~~i~~d~lviAtG~~p~~ 109 (454)
.+.. .|.+.+|+++.+|.+|+|+|.+|..
T Consensus 213 ~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 213 GEGQLEQVMASDGRSFVADSALICVGAEPAD 243 (410)
T ss_dssp CSSSCCEEEETTSCEEECSEEEECSCEEECC
T ss_pred ccCcEEEEEECCCCEEEcCEEEEeeCCeecH
Confidence 6543 5788889999999999999988764
No 175
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.22 E-value=1.5e-06 Score=87.83 Aligned_cols=52 Identities=21% Similarity=0.204 Sum_probs=43.3
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcC
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPN 276 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~ 276 (454)
.+.+++.|++++++++|+++..++ +....|.+++|+++.+|.||+|+|..+.
T Consensus 227 ~~~l~~~Gv~I~~~t~V~~I~~~~--~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 227 RATIIELGGEIRFSTRVDDLHMED--GQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHTTCEEESSCCEEEEEESS--SBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHhcCCEEEeCCEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCChh
Confidence 444566899999999999998765 2355688899999999999999999885
No 176
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.22 E-value=4.5e-06 Score=83.19 Aligned_cols=96 Identities=17% Similarity=0.232 Sum_probs=72.5
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. .+ +.+......+.+.+ +++++.+ ++..++
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~--G~~Vtlv~~~~~~l~-----~~-----~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 234 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSF--GSEVTVVALEDRLLF-----QF-----DPLLSATLAENMHAQGIETHLEFAVAALE 234 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSST-----TS-----CHHHHHHHHHHHHHTTCEEESSCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCEEEEEEcCCcccc-----cc-----CHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 4699999999999999999998 899999999865321 11 11222333455555 9999865 788887
Q ss_pred Ccc--cEEEeccCc-EEEecEEEEecCCCCCCC
Q psy1545 81 PRV--NCVITEKQN-RIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~--~~v~~~~g~-~i~~d~lviAtG~~p~~~ 110 (454)
.+. ..|.+.+|+ ++.+|.+|+|+|.+|+..
T Consensus 235 ~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 235 RDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp EETTEEEEEETTCCEEEEESEEEECSCEEESCT
T ss_pred EeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCC
Confidence 543 467777888 899999999999988764
No 177
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.22 E-value=3.7e-06 Score=79.86 Aligned_cols=114 Identities=11% Similarity=0.046 Sum_probs=70.9
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSL 212 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (454)
..+++|||+|+.|+.+|..|. |.+|+++++.+.+-..+ ...... ..+.....+....
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~---------~~~~~~------------~~~~~~~~~~~~~ 63 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL---------TALYPE------------KYIYDVAGFPKVY 63 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH---------HHTCTT------------SEECCSTTCSSEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee---------eccCCC------------ceeeccCCCCCCC
Confidence 358999999999999999886 99999999876542110 000000 0000000000000
Q ss_pred CCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccC
Q psy1545 213 GPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVV 274 (454)
Q Consensus 213 ~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~ 274 (454)
..++.. .+.+.+++.+++++.++.|.+++..++ .+.+.+++|.++.+|.||+|+|..
T Consensus 64 ~~~~~~--~l~~~~~~~~~~~~~~~~v~~i~~~~~---~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 64 AKDLVK--GLVEQVAPFNPVYSLGERAETLEREGD---LFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHH--HHHHHHGGGCCEEEESCCEEEEEEETT---EEEEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHH--HHHHHHHHcCCEEEeCCEEEEEEECCC---EEEEEECCCCEEEeCEEEECCCCC
Confidence 000000 112233457899999999999987652 467778888889999999999994
No 178
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.22 E-value=3.1e-06 Score=81.70 Aligned_cols=91 Identities=20% Similarity=0.258 Sum_probs=70.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. + +.+......+.+.+ +++++.+ ++..++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~l~------~-----~~~~~~~l~~~l~~~gV~i~~~~~v~~i~ 210 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA--GYHVKLIHRGAMFLG------L-----DEELSNMIKDMLEETGVKFFLNSELLEAN 210 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT--TCEEEEECSSSCCTT------C-----CHHHHHHHHHHHHHTTEEEECSCCEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCCeecc------C-----CHHHHHHHHHHHHHCCCEEEcCCEEEEEE
Confidence 4799999999999999999998 899999999875421 1 12233334455555 9999865 888887
Q ss_pred CcccEEEeccCcEEEecEEEEecCCCCCC
Q psy1545 81 PRVNCVITEKQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~~~~~v~~~~g~~i~~d~lviAtG~~p~~ 109 (454)
. ..+.+++|+ +.+|.+++|+|.+|..
T Consensus 211 ~--~~v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 211 E--EGVLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp S--SEEEETTEE-EECSCEEEECCEEECC
T ss_pred e--eEEEECCCE-EEcCEEEECcCCCcCH
Confidence 3 357777777 9999999999988764
No 179
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.21 E-value=7.4e-06 Score=83.87 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=33.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVK 40 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~ 40 (454)
.+||+|||||++|+++|..|++. |.+|+|+|+.+..+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~--g~~v~~~e~~~~~~ 162 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDA--GAKVILLEKEPIPG 162 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSS--SCCEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCCC
Confidence 36999999999999999999998 89999999987654
No 180
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.21 E-value=7e-06 Score=83.75 Aligned_cols=39 Identities=28% Similarity=0.486 Sum_probs=35.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
++||+|||||++|+++|..|+++ |.+|+|+|+++..++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~--G~~V~LlEk~d~~~Gt 56 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVR--GIQTGLVEMNDFASGT 56 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT--TCCEEEEESSSTTCSG
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCcEEEEECCCCCCCc
Confidence 48999999999999999999998 9999999999765543
No 181
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.19 E-value=5.9e-06 Score=76.81 Aligned_cols=87 Identities=10% Similarity=-0.023 Sum_probs=69.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcceEEEEeC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVDTVAAIDP 81 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~v~~i~~ 81 (454)
.+++|||+|+.|+.+|..|++. + +|+++++.+. .+.....+.+.+ +++++..++..++.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~--g-~v~~v~~~~~-----------------~~~~~~~~~l~~~gv~i~~~~v~~i~~ 201 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDW--G-ETTFFTNGIV-----------------EPDADQHALLAARGVRVETTRIREIAG 201 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGT--S-EEEEECTTTC-----------------CCCHHHHHHHHHTTCEEECSCEEEEET
T ss_pred CEEEEEecCccHHHHHHHhhhc--C-cEEEEECCCC-----------------CCCHHHHHHHHHCCcEEEcceeeeeec
Confidence 4799999999999999999998 7 9999987654 111223345555 99998778999987
Q ss_pred cccEEEeccCcEEEecEEEEecCCCCCCC
Q psy1545 82 RVNCVITEKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 82 ~~~~v~~~~g~~i~~d~lviAtG~~p~~~ 110 (454)
+. .|.+.+|+++.+|.+++|+|.+|..+
T Consensus 202 ~~-~v~~~~g~~~~~D~vi~a~G~~p~~~ 229 (297)
T 3fbs_A 202 HA-DVVLADGRSIALAGLFTQPKLRITVD 229 (297)
T ss_dssp TE-EEEETTSCEEEESEEEECCEEECCCS
T ss_pred CC-eEEeCCCCEEEEEEEEEccCcccCch
Confidence 65 78888899999999999999987653
No 182
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.18 E-value=3e-06 Score=83.84 Aligned_cols=107 Identities=14% Similarity=0.133 Sum_probs=71.6
Q ss_pred CCeEEEEcCchhHHHHHHHhc-----CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS-----NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKG 209 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~-----g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (454)
-++++|||||+.|+.+|..|+ +.+|+++++.+.+.- .+...........
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~---~~~~~~~~~g~~~----------------------- 57 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF---VPSNPWVGVGWKE----------------------- 57 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC---GGGHHHHHHTSSC-----------------------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc---cCCccccccCccC-----------------------
Confidence 368999999999999998774 679999998875421 1111000000000
Q ss_pred CCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 210 PSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 210 ~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
..++. ..+.+.+++.||+++. ..+++++.+++ .|.+++|+++.+|.||+|+|.+|+.+
T Consensus 58 ---~~~~~--~~l~~~~~~~gv~~~~-~~v~~id~~~~-----~V~~~~g~~i~~d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 58 ---RDDIA--FPIRHYVERKGIHFIA-QSAEQIDAEAQ-----NITLADGNTVHYDYLMIATGPKLAFE 115 (437)
T ss_dssp ---HHHHE--EECHHHHHTTTCEEEC-SCEEEEETTTT-----EEEETTSCEEECSEEEECCCCEECGG
T ss_pred ---HHHHH--HHHHHHHHHCCCEEEE-eEEEEEEcCCC-----EEEECCCCEEECCEEEECCCCCcCcc
Confidence 00000 0122333558999985 58999987652 57888998899999999999998865
No 183
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.18 E-value=4.5e-06 Score=78.60 Aligned_cols=102 Identities=16% Similarity=0.131 Sum_probs=70.1
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeC--CCccc-cc------cCCcchhhhHHHhhccCCCChhhhhhhccccc
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKD--KHISA-TF------LDPGAAEFFQDSINKTNTAKPETIFKRMRYNT 204 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~--~~~~~-~~------~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 204 (454)
.+++|||+|+.|+.+|..|+ |.+|+++++. ..+.. .. +.......+...
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 75 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKV-------------------- 75 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHH--------------------
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHH--------------------
Confidence 58999999999999999986 9999999986 11100 00 000000111111
Q ss_pred CCCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 205 GGEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 205 ~~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
+.+.+++.|++++. ..+.++..+++ .+.+.+++|.++.+|.+|+|+|..|...
T Consensus 76 -----------------~~~~~~~~~v~~~~-~~v~~i~~~~~---~~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 76 -----------------FNKHIEKYEVPVLL-DIVEKIENRGD---EFVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp -----------------HHHHHHTTTCCEEE-SCEEEEEEC-----CEEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred -----------------HHHHHHHcCCEEEE-EEEEEEEecCC---EEEEEECCCCEEEcCEEEECcCCCCccC
Confidence 12223457999999 89999987653 5678888888999999999999998764
No 184
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.17 E-value=7.5e-06 Score=80.38 Aligned_cols=96 Identities=17% Similarity=0.201 Sum_probs=72.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. . ..+..+.....+.+.+ +++++.+ .+..+.
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtvv~~~~~~l~--------~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 221 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKF--GVNVTLLEALPRVLA--------R-VAGEALSEFYQAEHRAHGVDLRTGAAMDCIE 221 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSSTTT--------T-TSCHHHHHHHHHHHHHTTCEEEETCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCeEEEEecCCchhh--------h-hcCHHHHHHHHHHHHhCCCEEEECCEEEEEE
Confidence 4699999999999999999998 899999999875421 0 0112233333445555 9999854 888887
Q ss_pred Ccc-c--EEEeccCcEEEecEEEEecCCCCCC
Q psy1545 81 PRV-N--CVITEKQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~~~-~--~v~~~~g~~i~~d~lviAtG~~p~~ 109 (454)
.+. + .|.+.+|+++.+|.+|+|+|.+|..
T Consensus 222 ~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 222 GDGTKVTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp ESSSBEEEEEESSSCEEECSEEEECSCCEESC
T ss_pred ecCCcEEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 643 2 5777889999999999999998764
No 185
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.17 E-value=6.1e-06 Score=81.55 Aligned_cols=94 Identities=15% Similarity=0.202 Sum_probs=72.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..++++ +.+|+++++.+.+.. . .+.+......+.+.+ +++++.+ ++..++
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~--g~~Vtlv~~~~~ll~-----~-----~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~ 215 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYER--GLHPTLIHRSDKINK-----L-----MDADMNQPILDELDKREIPYRLNEEINAIN 215 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSCCST-----T-----SCGGGGHHHHHHHHHTTCCEEESCCEEEEE
T ss_pred cEEEEECCccchhhhHHHHHhc--CCcceeeeeeccccc-----c-----ccchhHHHHHHHhhccceEEEeccEEEEec
Confidence 3799999999999999999999 899999998875421 1 112333444555666 9999755 888887
Q ss_pred CcccEEEeccCcEEEecEEEEecCCCCCCC
Q psy1545 81 PRVNCVITEKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~~~v~~~~g~~i~~d~lviAtG~~p~~~ 110 (454)
.. .+.+++|+.+.+|.+++|+|.+|+..
T Consensus 216 ~~--~v~~~~g~~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 216 GN--EITFKSGKVEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp TT--EEEETTSCEEECSEEEECCCEEESCG
T ss_pred CC--eeeecCCeEEeeeeEEEEeceecCcH
Confidence 54 57788999999999999999887643
No 186
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=5.1e-06 Score=82.63 Aligned_cols=97 Identities=15% Similarity=0.267 Sum_probs=70.5
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. |.+|+++++.+.+.. .+ +.+......+.+.+ +++++.+ ++..++
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 238 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANF--GTKVTILEGAGEILS-----GF-----EKQMAAIIKKRLKKKGVEVVTNALAKGAE 238 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSSSST-----TS-----CHHHHHHHHHHHHHTTCEEEESEEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCCcccc-----cc-----CHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 4799999999999999999998 899999999865421 11 12233334445555 9999865 888887
Q ss_pred Cccc--EEEec---cCcEEEecEEEEecCCCCCCCC
Q psy1545 81 PRVN--CVITE---KQNRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~~~--~v~~~---~g~~i~~d~lviAtG~~p~~~~ 111 (454)
.+.. .+.+. +++++.+|.+|+|+|.+|....
T Consensus 239 ~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 239 EREDGVTVTYEANGETKTIDADYVLVTVGRRPNTDE 274 (455)
T ss_dssp EETTEEEEEEEETTEEEEEEESEEEECSCEEESCSS
T ss_pred EeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCc
Confidence 5443 34443 4568999999999999887643
No 187
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.16 E-value=6.5e-06 Score=77.21 Aligned_cols=113 Identities=9% Similarity=0.122 Sum_probs=69.7
Q ss_pred eEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccC-CcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCC
Q psy1545 137 KIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLD-PGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLG 213 (454)
Q Consensus 137 ~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 213 (454)
+++|||+|+.|+.+|..|. |.+|+++++.. -..+.. ....... .....-.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~--gG~~~~~~~~~~~~-------------------------~~~~~~~ 55 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERF--GGQILDTVDIENYI-------------------------SVPKTEG 55 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSST--TGGGGGCCEECCBT-------------------------TBSSEEH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC--Cceecccccccccc-------------------------CcCCCCH
Confidence 6899999999999999986 89999996421 000000 0000000 0000000
Q ss_pred CccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 214 PDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 214 ~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
+++.. .+.+.+++.|++++.++++..+....+....+.+.+++|+++.+|.+|+|+|.+|...
T Consensus 56 ~~~~~--~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~ 118 (310)
T 1fl2_A 56 QKLAG--ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNM 118 (310)
T ss_dssp HHHHH--HHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred HHHHH--HHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCC
Confidence 00000 1122235579999999999999764311224678888888899999999999988654
No 188
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.16 E-value=1.1e-05 Score=81.36 Aligned_cols=96 Identities=16% Similarity=0.165 Sum_probs=72.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+- +.+ +.+......+.+.+ +++++.+ ++..++
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~--g~~Vtlv~~~~~~l-----~~~-----d~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 244 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRL--GIDSYIFARGNRIL-----RKF-----DESVINVLENDMKKNNINIVTFADVVEIK 244 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSSSSC-----TTS-----CHHHHHHHHHHHHHTTCEEECSCCEEEEE
T ss_pred CeEEEECChHHHHHHHHHHHHc--CCeEEEEecCCccC-----ccc-----chhhHHHHHHHHHhCCCEEEECCEEEEEE
Confidence 3699999999999999999998 89999999977532 111 12233344455655 9999865 888887
Q ss_pred Ccc---cEEEeccCcE-EEecEEEEecCCCCCCC
Q psy1545 81 PRV---NCVITEKQNR-IKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~---~~v~~~~g~~-i~~d~lviAtG~~p~~~ 110 (454)
.+. ..+.+.+|+. +.+|.+|+|+|.+|...
T Consensus 245 ~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 245 KVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp ESSTTCEEEEETTSCEEEEESEEEECCCBCCTTT
T ss_pred EcCCceEEEEECCCcEEEECCEEEECCCCCcCCC
Confidence 542 3677778887 99999999999998764
No 189
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.16 E-value=6.1e-06 Score=80.86 Aligned_cols=106 Identities=19% Similarity=0.198 Sum_probs=69.6
Q ss_pred CeEEEEcCchhHHHHHHHhc-----CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCC
Q psy1545 136 KKIVVIGNGGIATELVHELS-----NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGP 210 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~-----g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (454)
++++|||||+.|+++|..|+ |.+|+++++++.+.. .+...... .+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~---~~~~~~~~--------------------------~~~ 52 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYF---RPALPHVA--------------------------IGV 52 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEE---CCSSCCCC--------------------------SSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCcee---ccchhhcc--------------------------cCC
Confidence 58999999999999998774 689999998875432 11100000 000
Q ss_pred CCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCc----EEecCEEEEeeccCcCcc
Q psy1545 211 SLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGH----THACDIVVSAIGVVPNSN 278 (454)
Q Consensus 211 ~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~----~~~~D~vi~a~G~~p~~~ 278 (454)
....++.. .+.+.+++.|++++.+ .++++..++. .+.+++++ ++++|.||+|+|.+|+.+
T Consensus 53 ~~~~~~~~--~~~~~~~~~gv~~~~~-~v~~i~~~~~-----~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 53 RDVDELKV--DLSEALPEKGIQFQEG-TVEKIDAKSS-----MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp CCCCCEEE--EHHHHTGGGTCEEEEC-EEEEEETTTT-----EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred cCHHHHHH--HHHHHHhhCCeEEEEe-eEEEEeCCCC-----EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 00011111 1233345589999988 8999987652 45666664 499999999999998764
No 190
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.15 E-value=7.8e-06 Score=79.96 Aligned_cols=96 Identities=15% Similarity=0.199 Sum_probs=72.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||+|+.|+.+|..|++. +.+|+++++.+.... . ...........+.+.+ +++++.+ ++..+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtvv~~~~~~~~--------~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 211 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAK--GLEVDVVELAPRVMA--------R-VVTPEISSYFHDRHSGAGIRMHYGVRATEIA 211 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSTTT--------T-TSCHHHHHHHHHHHHHTTCEEECSCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCCcchh--------h-ccCHHHHHHHHHHHHhCCcEEEECCEEEEEE
Confidence 4699999999999999999998 899999999875421 0 0112233334445555 9999865 888887
Q ss_pred Cccc---EEEeccCcEEEecEEEEecCCCCCC
Q psy1545 81 PRVN---CVITEKQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~~~~---~v~~~~g~~i~~d~lviAtG~~p~~ 109 (454)
.++. .|.+.+|+++.+|.+|+|+|.+|..
T Consensus 212 ~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 212 AEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp EETTEEEEEEETTSCEEECSEEEECCCEEECC
T ss_pred ecCCcEEEEEeCCCCEEEcCEEEECcCCccCH
Confidence 6432 4677889999999999999988764
No 191
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.14 E-value=7.5e-06 Score=78.63 Aligned_cols=115 Identities=11% Similarity=0.128 Sum_probs=72.0
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSL 212 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (454)
..+++|||+|+.|+.+|..|. |.+|+++++.+.+-... ...... ..+.....+ +.+
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~---------~~~~~~------------~~~~~~~~~-~~~ 71 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQL---------AALYPE------------KHIYDVAGF-PEV 71 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH---------HHTCTT------------SEECCSTTC-SSE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc---------cccCCC------------cccccCCCC-CCC
Confidence 468999999999999999886 99999999876542110 000000 000000000 000
Q ss_pred C-CccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 213 G-PDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 213 ~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
. .++.. .+.+.+++.+++++.++.|+++...++ ..+.+.+++|+++.+|.||+|+|..+
T Consensus 72 ~~~~~~~--~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 72 PAIDLVE--SLWAQAERYNPDVVLNETVTKYTKLDD--GTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp EHHHHHH--HHHHHHHTTCCEEECSCCEEEEEECTT--SCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred CHHHHHH--HHHHHHHHhCCEEEcCCEEEEEEECCC--ceEEEEECCCcEEEeeEEEEccCCCc
Confidence 0 00000 122333557899999999999987542 24678888888899999999999943
No 192
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.14 E-value=3.9e-06 Score=82.80 Aligned_cols=107 Identities=21% Similarity=0.138 Sum_probs=72.6
Q ss_pred CCeEEEEcCchhHHHHHHHhc----CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS----NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGP 210 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~----g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (454)
.++++|||||+.|+.+|..|+ +.+|+++++.+.+.- .+..........
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~---~~~~~~~~~g~~------------------------- 53 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF---TPAFPHLAMGWR------------------------- 53 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC---GGGHHHHHHTCS-------------------------
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCc---CCCcchhccCcc-------------------------
Confidence 368999999999999998885 689999998876432 111111000000
Q ss_pred CCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 211 SLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 211 ~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
-..++. ..+.+.+++.||+++.+ .++.++.+. ..+.+++++++.+|.+|+|+|.+|+.+
T Consensus 54 -~~~~~~--~~~~~~~~~~gv~~~~~-~v~~id~~~-----~~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 54 -KFEDIS--VPLAPLLPKFNIEFINE-KAESIDPDA-----NTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp -CGGGSE--EESTTTGGGGTEEEECS-CEEEEETTT-----TEEEETTCCEEECSEEEECCCCEEECC
T ss_pred -CHHHHH--HHHHHHHHhcCCEEEEE-EEEEEECCC-----CEEEECCCcEEECCEEEEcCCcccccC
Confidence 000000 11234446689999975 899998765 257788888899999999999998764
No 193
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.14 E-value=4e-06 Score=82.22 Aligned_cols=138 Identities=12% Similarity=0.154 Sum_probs=76.8
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccc--------------cCCc-----chhhhHHHhhccCCCCh
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATF--------------LDPG-----AAEFFQDSINKTNTAKP 193 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~--------------~d~~-----~~~~~~~~l~~~~~~~~ 193 (454)
..+|+|||||+.|+.+|..++ |.+|+++++.+.+..+. .+++ ....+...+......+.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 458999999999999999986 99999999887642210 0000 00111111110000000
Q ss_pred hhhhhhcccccCCCCCCCCCCccc--ccc-ccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEe
Q psy1545 194 ETIFKRMRYNTGGEKGPSLGPDWH--TQV-NLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSA 270 (454)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~-~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a 270 (454)
.....+..+.........+.+... ... .+.+.+++.|++++++++|+++..+++ .+.|.+++| ++.+|.||+|
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~---~~~V~~~~g-~i~ad~VIlA 182 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS---GFRVTTSAG-TVDAASLVVA 182 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT---EEEEEETTE-EEEESEEEEC
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC---EEEEEECCc-EEEeeEEEEC
Confidence 000001111110000011111111 000 133445667999999999999987653 477888887 8999999999
Q ss_pred eccCcC
Q psy1545 271 IGVVPN 276 (454)
Q Consensus 271 ~G~~p~ 276 (454)
+|..+.
T Consensus 183 tG~~S~ 188 (417)
T 3v76_A 183 SGGKSI 188 (417)
T ss_dssp CCCSSC
T ss_pred CCCccC
Confidence 999863
No 194
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.13 E-value=9.8e-06 Score=80.39 Aligned_cols=49 Identities=20% Similarity=0.180 Sum_probs=37.3
Q ss_pred cCCceEEEeCceEEEEEcCCCCccceEEEecC---Cc---EEecCEEEEeecc--CcCcc
Q psy1545 227 RDTKITIEYSCEVERIVDSEDDTCNAYVKLTN---GH---THACDIVVSAIGV--VPNSN 278 (454)
Q Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~---g~---~~~~D~vi~a~G~--~p~~~ 278 (454)
++.++.++++++|++++..++ .+.|++.+ |+ ++.+|.||+|+|. .|+.+
T Consensus 126 ~~~~~~i~~~t~V~~v~~~~~---~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 126 QPLLPFIKLATDVLDIEKKDG---SWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIP 182 (447)
T ss_dssp GGGGGGEECSEEEEEEEEETT---EEEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBC
T ss_pred HHhhCeEEeCCEEEEEEeCCC---eEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCC
Confidence 344778889999999987543 46677665 66 7999999999999 55543
No 195
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.13 E-value=9.6e-06 Score=80.01 Aligned_cols=96 Identities=15% Similarity=0.185 Sum_probs=71.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. . ..+.++.....+.+.+ +++++.+ ++..++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~--G~~Vtlv~~~~~~l~--------~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 218 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKA--NMHVTLLDTAARVLE--------R-VTAPPVSAFYEHLHREAGVDIRTGTQVCGFE 218 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSTTT--------T-TSCHHHHHHHHHHHHHHTCEEECSCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEEeCCcccc--------c-hhhHHHHHHHHHHHHhCCeEEEeCCEEEEEE
Confidence 4699999999999999999998 899999998765311 0 0111233333445555 9999866 888887
Q ss_pred C--c-cc--EEEeccCcEEEecEEEEecCCCCCC
Q psy1545 81 P--R-VN--CVITEKQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~--~-~~--~v~~~~g~~i~~d~lviAtG~~p~~ 109 (454)
. + .+ .|.+.+|+.+.+|.+|+|+|.+|..
T Consensus 219 ~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 219 MSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNC 252 (431)
T ss_dssp ECTTTCCEEEEEETTSCEEECSEEEECCCEEECC
T ss_pred eccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCc
Confidence 5 3 22 5677788899999999999987753
No 196
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.11 E-value=9.7e-06 Score=83.40 Aligned_cols=95 Identities=23% Similarity=0.335 Sum_probs=74.4
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.... .+ +.+......+.+.+ +++++.+ ++..++
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----~~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 255 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRER--GIEVTLVEMANQVMP-----PI-----DYEMAAYVHEHMKNHDVELVFEDGVDALE 255 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSCT-----TS-----CHHHHHHHHHHHHHTTCEEECSCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCcccc-----cC-----CHHHHHHHHHHHHHcCCEEEECCeEEEEe
Confidence 4699999999999999999998 899999998764321 11 12233344455555 9999864 899998
Q ss_pred CcccEEEeccCcEEEecEEEEecCCCCCC
Q psy1545 81 PRVNCVITEKQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~~~~~v~~~~g~~i~~d~lviAtG~~p~~ 109 (454)
.+...|.+.+|+++.+|.+|+|+|.+|..
T Consensus 256 ~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 256 ENGAVVRLKSGSVIQTDMLILAIGVQPES 284 (588)
T ss_dssp GGGTEEEETTSCEEECSEEEECSCEEECC
T ss_pred cCCCEEEECCCCEEEcCEEEEccCCCCCh
Confidence 76667888888899999999999988764
No 197
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.11 E-value=1e-05 Score=81.00 Aligned_cols=95 Identities=14% Similarity=0.130 Sum_probs=72.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. .+ +.+......+.+.+ +++++.+ ++..++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 253 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGL--GSETHLVIRGETVLR-----KF-----DECIQNTITDHYVKEGINVHKLSKIVKVE 253 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT--TCEEEEECSSSSSCT-----TS-----CHHHHHHHHHHHHHHTCEEECSCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCceEEEEeCCcccc-----cc-----CHHHHHHHHHHHHhCCeEEEeCCEEEEEE
Confidence 4799999999999999999998 899999999875321 11 11233344455556 9999865 888887
Q ss_pred Cc--c--cEEEeccC-cEEEecEEEEecCCCCCC
Q psy1545 81 PR--V--NCVITEKQ-NRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~~--~--~~v~~~~g-~~i~~d~lviAtG~~p~~ 109 (454)
.+ . ..|.+.+| +.+.+|.+|+|+|.+|..
T Consensus 254 ~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 254 KNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp ECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred EcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 53 2 35777788 789999999999998876
No 198
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.11 E-value=8.2e-06 Score=84.66 Aligned_cols=35 Identities=26% Similarity=0.263 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHhh-cCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAF-LHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-~~~g~~v~lie~~~~ 38 (454)
++||+|||||++|+++|..|++ . |.+|+|||+.+.
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~--G~~V~viEr~~~ 67 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFP--DIRTCIVEQKEG 67 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCT--TSCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHhC--CCCEEEEeCCCC
Confidence 3799999999999999999999 8 999999999754
No 199
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.10 E-value=8.5e-06 Score=81.56 Aligned_cols=96 Identities=22% Similarity=0.272 Sum_probs=70.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. .+ +.+......+.+.+ +++++.+ ++..++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 251 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRL--GSKVTVVEFQPQIGA-----SM-----DGEVAKATQKFLKKQGLDFKLSTKVISAK 251 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSSS-----SS-----CHHHHHHHHHHHHHTTCEEECSEEEEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHc--CCEEEEEEeCCcccc-----cc-----CHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 4799999999999999999998 899999999875421 11 12233344455555 9999865 888887
Q ss_pred C--ccc--EEEec-----cCcEEEecEEEEecCCCCCCC
Q psy1545 81 P--RVN--CVITE-----KQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~--~~~--~v~~~-----~g~~i~~d~lviAtG~~p~~~ 110 (454)
. +.. .+.+. +++.+.+|.+|+|+|.+|...
T Consensus 252 ~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 252 RNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred EecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 5 333 44444 346799999999999988764
No 200
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.10 E-value=1.1e-05 Score=80.97 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=71.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. . ..+.++.....+.+.+ +++++.+ ++..++
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~--g~~Vtlv~~~~~~l~--------~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 263 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRK--GKEVVLIDVVDTCLA--------G-YYDRDLTDLMAKNMEEHGIQLAFGETVKEVA 263 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSSTTT--------T-TSCHHHHHHHHHHHHTTTCEEEETCCEEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHC--CCeEEEEEcccchhh--------h-HHHHHHHHHHHHHHHhCCeEEEeCCEEEEEE
Confidence 4699999999999999999998 899999999865311 0 0112333444556666 9999865 888887
Q ss_pred Cccc--EEEeccCcEEEecEEEEecCCCCCCC
Q psy1545 81 PRVN--CVITEKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~~--~v~~~~g~~i~~d~lviAtG~~p~~~ 110 (454)
.+.+ .+.+ +++++.+|.+|+|+|.+|..+
T Consensus 264 ~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 264 GNGKVEKIIT-DKNEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp CSSSCCEEEE-SSCEEECSEEEECCCEEECCG
T ss_pred cCCcEEEEEE-CCcEEECCEEEECCCCCcChH
Confidence 6542 3555 677899999999999887653
No 201
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.09 E-value=1.3e-05 Score=81.67 Aligned_cols=35 Identities=29% Similarity=0.293 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++||+|||||++|+++|..|++. |.+|+|||+.+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~--G~~V~vlEr~~~ 60 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHR--QVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 37999999999999999999998 999999999754
No 202
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.09 E-value=7.4e-06 Score=82.08 Aligned_cols=96 Identities=22% Similarity=0.321 Sum_probs=71.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. |.+|+++++.+.+-. . .+.+......+.+.+ +|+++.+ ++..++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~--G~~Vtlv~~~~~~l~-----~-----~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~ 253 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTL--GSRLDVVEMMDGLMQ-----G-----ADRDLVKVWQKQNEYRFDNIMVNTKTVAVE 253 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSSSSST-----T-----SCHHHHHHHHHHHGGGEEEEECSCEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCeEEEEEECCcccc-----c-----cCHHHHHHHHHHHHhcCCEEEECCEEEEEE
Confidence 4799999999999999999998 899999999875421 1 112233344555666 9999865 888887
Q ss_pred Ccc--cEEEecc----CcEEEecEEEEecCCCCCCC
Q psy1545 81 PRV--NCVITEK----QNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~--~~v~~~~----g~~i~~d~lviAtG~~p~~~ 110 (454)
.+. ..+.+.+ |+++.+|.+|+|+|.+|+..
T Consensus 254 ~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 254 PKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp EETTEEEEEEESSSCCSSCEEESCEEECCCEEECGG
T ss_pred EcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCC
Confidence 543 3456655 67899999999999988753
No 203
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.09 E-value=1.7e-05 Score=80.36 Aligned_cols=131 Identities=20% Similarity=0.204 Sum_probs=73.1
Q ss_pred CeEEEEcCchhHHHHHHHhc---CCcEEEEEeCCCcccccc---CCcchhhhHHHhhccCCCChhhhhhhcccccCCCCC
Q psy1545 136 KKIVVIGNGGIATELVHELS---NVDIVWVVKDKHISATFL---DPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKG 209 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~---g~~V~~i~~~~~~~~~~~---d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (454)
.+++|||||+.|+.+|..|. |.+|+++++.+.+-..+. .+...-.....+-. ..-. ..+.... ...
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~-~~~~-~~~~~~~------~~~ 80 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYR-FSFD-RDLLQES------TWK 80 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSS-CCSC-HHHHHHC------CCS
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceee-eccc-cccccCC------CCc
Confidence 58999999999999998885 889999998765432110 00000000000000 0000 0000000 000
Q ss_pred CCC--CCccccccccccCccCCce--EEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeecc--CcCc
Q psy1545 210 PSL--GPDWHTQVNLHGSSRDTKI--TIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGV--VPNS 277 (454)
Q Consensus 210 ~~l--~~~~~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~--~p~~ 277 (454)
..+ .+++.. ++.+..++.|+ ++++++.|+++..+++ ...+.|.+++|+++.+|.||+|+|. +|..
T Consensus 81 ~~~~~~~ei~~--~l~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 81 TTYITQPEILE--YLEDVVDRFDLRRHFKFGTEVTSALYLDD-ENLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp BSEEEHHHHHH--HHHHHHHHTTCGGGEEESCCEEEEEEETT-TTEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred ccCCCHHHHHH--HHHHHHHHcCCcceeEeccEEEEEEEeCC-CCEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 000 001111 12222345677 8999999999986553 3367889999999999999999995 5554
No 204
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.09 E-value=1.9e-06 Score=87.08 Aligned_cols=48 Identities=19% Similarity=0.229 Sum_probs=39.5
Q ss_pred cccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccC
Q psy1545 222 LHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVV 274 (454)
Q Consensus 222 ~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~ 274 (454)
+.+.+++.|+++++++.|++|..++. .+.+.+|+++.+|.||.++...
T Consensus 228 l~~~l~~~g~~i~~~~~V~~I~~~~~-----~v~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 228 VANTLPKEKTRFGEKGKVTKVNANNK-----TVTLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHTSCGGGEEESGGGCEEEEETTTT-----EEEETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHhcCeeeecceEEEEEEccCC-----EEEEcCCCEEECCEEEECCCHH
Confidence 34556778999999999999998662 4678999999999999987653
No 205
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.09 E-value=8.6e-06 Score=76.41 Aligned_cols=111 Identities=15% Similarity=0.166 Sum_probs=68.6
Q ss_pred eEEEEcCchhHHHHHHHhc--CC-cEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCC
Q psy1545 137 KIVVIGNGGIATELVHELS--NV-DIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLG 213 (454)
Q Consensus 137 ~vvVvG~G~~g~e~a~~l~--g~-~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 213 (454)
+++|||+|+.|+.+|..|. |. +|+++++.. +-....... .+ .....+...+.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~~~~~~-------~~-----------------~~~~~~~~~~~ 57 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQITGSS-------EI-----------------ENYPGVKEVVS 57 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCGGGGCS-------CB-----------------CCSTTCCSCBC
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCccccccc-------cc-----------------ccCCCCcccCC
Confidence 6899999999999999886 88 999999742 111000000 00 00000000000
Q ss_pred -CccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 214 -PDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 214 -~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
.++.. .+.+.+++.|++++. ..+.++...++ .+.+.+.+|+++.+|.||+|+|..|...
T Consensus 58 ~~~~~~--~l~~~~~~~~v~~~~-~~v~~i~~~~~---~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 58 GLDFMQ--PWQEQCFRFGLKHEM-TAVQRVSKKDS---HFVILAEDGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp HHHHHH--HHHHHHHTTSCEEEC-SCEEEEEEETT---EEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred HHHHHH--HHHHHHHHcCCEEEE-EEEEEEEEcCC---EEEEEEcCCCEEECCEEEECCCCCCCCC
Confidence 00000 112233557999988 68888876542 4667788888999999999999987654
No 206
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.09 E-value=2.3e-05 Score=77.87 Aligned_cols=96 Identities=17% Similarity=0.185 Sum_probs=71.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||..|+.+|..|++. +.+|+++++.+.+.. . ..+.+......+.+.+ +++++.+ ++..++
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~l~--------~-~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 216 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKM--KKTVHVFESLENLLP--------K-YFDKEMVAEVQKSLEKQAVIFHFEETVLGIE 216 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSSSST--------T-TCCHHHHHHHHHHHHTTTEEEEETCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEEccCcccc--------c-cCCHHHHHHHHHHHHHcCCEEEeCCEEEEEE
Confidence 4699999999999999999998 899999999875411 0 0112333444556666 9999854 888887
Q ss_pred Cc-cc-EEEeccCcEEEecEEEEecCCCCCCC
Q psy1545 81 PR-VN-CVITEKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~-~~-~v~~~~g~~i~~d~lviAtG~~p~~~ 110 (454)
.. .. .|.++++ ++.+|.+|+|+|.+|...
T Consensus 217 ~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~~ 247 (452)
T 3oc4_A 217 ETANGIVLETSEQ-EISCDSGIFALNLHPQLA 247 (452)
T ss_dssp ECSSCEEEEESSC-EEEESEEEECSCCBCCCS
T ss_pred ccCCeEEEEECCC-EEEeCEEEECcCCCCChH
Confidence 33 22 3666556 899999999999988764
No 207
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.08 E-value=1.3e-05 Score=80.15 Aligned_cols=97 Identities=20% Similarity=0.248 Sum_probs=70.5
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. . . + +.+......+.+.+ +++++.+ ++..++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~l~---~-~----~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 247 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRL--GADVTAVEFLGHVGG---V-G----I-DMEISKNFQRILQKQGFKFKLNTKVTGAT 247 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSSC---S-S----C-CHHHHHHHHHHHHHTTCEEECSEEEEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHc--CCEEEEEeccCccCC---c-c----c-CHHHHHHHHHHHHHCCCEEEeCceEEEEE
Confidence 4799999999999999999998 899999999875311 0 0 1 11233334455555 9999865 888887
Q ss_pred Ccc---cEEEe-----ccCcEEEecEEEEecCCCCCCC
Q psy1545 81 PRV---NCVIT-----EKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~---~~v~~-----~~g~~i~~d~lviAtG~~p~~~ 110 (454)
.+. ..+.+ .+++++.+|.+|+|+|.+|...
T Consensus 248 ~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 248 KKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp ECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCT
T ss_pred EcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCC
Confidence 654 23442 3556899999999999988754
No 208
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.07 E-value=7e-06 Score=83.47 Aligned_cols=133 Identities=15% Similarity=0.184 Sum_probs=74.5
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcccccc---CCcchhhhHHHhhccCCCChhhhhhhcccccCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFL---DPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKG 209 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~---d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (454)
..+++|||+|+.|+.+|..|. |.+|+++++.+.+-..+. .|...-.....+-. ..-. ..+.... ...
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~-~~f~-~~~~~~~------~~~ 92 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYS-YSFS-PELEQEW------NWS 92 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSS-CCSC-HHHHHHC------CCS
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcc-cccc-cccccCC------CCc
Confidence 358999999999999999986 999999998765432110 00000000000000 0000 0000000 000
Q ss_pred CCCC--CccccccccccCccCCce--EEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeec--cCcCcc
Q psy1545 210 PSLG--PDWHTQVNLHGSSRDTKI--TIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIG--VVPNSN 278 (454)
Q Consensus 210 ~~l~--~~~~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G--~~p~~~ 278 (454)
..+. +++.. ++.+..++.|+ +++++++|+++..+++ ...+.|.+++|+++.+|.||+|+| .+|..+
T Consensus 93 ~~~~~~~ei~~--yl~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 93 EKYATQPEILA--YLEHVADRFDLRRDIRFDTRVTSAVLDEE-GLRWTVRTDRGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp SSSCBHHHHHH--HHHHHHHHTTCGGGEECSCCEEEEEEETT-TTEEEEEETTCCEEEEEEEEECCCSEEECCCC
T ss_pred cCCCCHHHHHH--HHHHHHHHcCCCccEEECCEEEEEEEcCC-CCEEEEEECCCCEEEeCEEEECcCCCCCCCCC
Confidence 0000 11111 12222344666 7899999999986543 336788999999999999999999 566543
No 209
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.07 E-value=1.2e-05 Score=77.94 Aligned_cols=134 Identities=16% Similarity=0.086 Sum_probs=76.2
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhh-----hhhcccccCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETI-----FKRMRYNTGGE 207 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~ 207 (454)
..+|+|||||+.|+.+|..|. |.+|+++++.+........-.+.....+.+.+. .-..... .....+.. .
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~--~ 87 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGL-GALDDVLQGSHTPPTYETWM--H 87 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHT-TCHHHHHTTCBCCSCEEEEE--T
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHc-CCHHHHHhhCCCccceEEEe--C
Confidence 568999999999999999996 999999998765432100000111111111110 0000000 00000000 0
Q ss_pred CCCCC------C-Cc--ccc---ccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 208 KGPSL------G-PD--WHT---QVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 208 ~~~~l------~-~~--~~~---~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
+..+ + +. +.+ ...+.+.+++.|++++.+++|++++. + . .+++++|+++.+|+||.|+|..+
T Consensus 88 -g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~----~-~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 88 -NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V----G-RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp -TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T----T-EEEETTSCEEECSEEEECCCTTC
T ss_pred -CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C----C-EEEECCCCEEEcCEEEECCCccH
Confidence 0000 0 00 000 00123444557999999999999987 3 2 67888898999999999999987
Q ss_pred Ccc
Q psy1545 276 NSN 278 (454)
Q Consensus 276 ~~~ 278 (454)
...
T Consensus 161 ~vr 163 (379)
T 3alj_A 161 KVR 163 (379)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 210
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.06 E-value=1.2e-05 Score=81.44 Aligned_cols=95 Identities=17% Similarity=0.189 Sum_probs=71.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||..|+.+|..|++. +.+|+++++.+.+.. .+ +.++.....+.+.+ +++++.+ ++..++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~--G~~Vtlv~~~~~~l~-----~~-----~~~~~~~l~~~l~~~GV~i~~~~~V~~i~ 282 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT--GRRTVMLVRTEPLKL-----IK-----DNETRAYVLDRMKEQGMEIISGSNVTRIE 282 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCTTTT-----CC-----SHHHHHHHHHHHHHTTCEEESSCEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCeEEEEEecCcccc-----cc-----cHHHHHHHHHHHHhCCcEEEECCEEEEEE
Confidence 5799999999999999999998 889999999875321 11 12233344455555 9999865 888887
Q ss_pred C--cc----cEEEeccCc-EEEecEEEEecCCCCCC
Q psy1545 81 P--RV----NCVITEKQN-RIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~--~~----~~v~~~~g~-~i~~d~lviAtG~~p~~ 109 (454)
. +. ..|.+.+|+ ++.+|.+|+|+|.+|..
T Consensus 283 ~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 283 EDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp ECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred EcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 5 33 346676776 89999999999998865
No 211
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.06 E-value=1.1e-05 Score=86.31 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~~ 38 (454)
++||+|||||++|+++|++|++. |. +|+|||+++.
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~--G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTR--GWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--CCCcEEEEeCCCC
Confidence 58999999999999999999998 87 9999999875
No 212
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.06 E-value=1.2e-05 Score=81.20 Aligned_cols=96 Identities=14% Similarity=0.049 Sum_probs=72.3
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+-.|..++++ |.+|+|+++...+. . .+.++.....+.+.+ ++.++.+ .+..+.
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~l--G~~VTii~~~~~L~------~-----~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~ 290 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSL--GYDVTVAVRSIVLR------G-----FDQQCAVKVKLYMEEQGVMFKNGILPKKLT 290 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEEESSCSST------T-----SCHHHHHHHHHHHHHTTCEEEETCCEEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhc--CCeEEEeccccccc------c-----cchhHHHHHHHHHHhhcceeecceEEEEEE
Confidence 4799999999999999999999 99999998754321 1 123344455566666 9999765 777776
Q ss_pred Cccc--EEEeccCcEEEecEEEEecCCCCCCCC
Q psy1545 81 PRVN--CVITEKQNRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~~~--~v~~~~g~~i~~d~lviAtG~~p~~~~ 111 (454)
.... .|.+.++..+.+|.+++|+|-+|+...
T Consensus 291 ~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~ 323 (542)
T 4b1b_A 291 KMDDKILVEFSDKTSELYDTVLYAIGRKGDIDG 323 (542)
T ss_dssp EETTEEEEEETTSCEEEESEEEECSCEEESCGG
T ss_pred ecCCeEEEEEcCCCeEEEEEEEEcccccCCccc
Confidence 5444 455667788999999999999887654
No 213
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.05 E-value=1.5e-05 Score=79.42 Aligned_cols=97 Identities=18% Similarity=0.151 Sum_probs=71.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. .+ +.+......+.+.+ +++++.+ ++..++
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 239 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNY--GVDVTIVEFLPRALP-----NE-----DADVSKEIEKQFKKLGVTILTATKVESIA 239 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSST-----TS-----CHHHHHHHHHHHHHHTCEEECSCEEEEEE
T ss_pred CeEEEECCcHHHHHHHHHHHHc--CCeEEEEEcCCcccc-----cc-----CHHHHHHHHHHHHHcCCEEEeCcEEEEEE
Confidence 4799999999999999999998 899999999875321 11 12233334455555 9999865 888887
Q ss_pred Ccc--cEEEec-cC--cEEEecEEEEecCCCCCCCC
Q psy1545 81 PRV--NCVITE-KQ--NRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~~--~~v~~~-~g--~~i~~d~lviAtG~~p~~~~ 111 (454)
.+. ..+.+. +| +++.+|.+|+|+|.+|....
T Consensus 240 ~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 240 DGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp ECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSS
T ss_pred EcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCC
Confidence 544 244443 55 57999999999999887643
No 214
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.05 E-value=1.6e-05 Score=79.93 Aligned_cols=98 Identities=17% Similarity=0.273 Sum_probs=73.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCC-CCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHP-GESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAI 79 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~-g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i 79 (454)
.+++|||||+.|+.+|..|++..+ +.+|+++++.+.+- +.+ +.+......+.+.+ +++++.+ ++..+
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-----~~~-----d~~~~~~l~~~l~~~GV~i~~~~~v~~i 261 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-----RGF-----DETIREEVTKQLTANGIEIMTNENPAKV 261 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-----TTS-----CHHHHHHHHHHHHHTTCEEEESCCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-----ccc-----CHHHHHHHHHHHHhCCCEEEeCCEEEEE
Confidence 469999999999999999998743 78999999987532 111 11233344455555 9999865 88888
Q ss_pred eCcc---cEEEeccCcEEEecEEEEecCCCCCCC
Q psy1545 80 DPRV---NCVITEKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 80 ~~~~---~~v~~~~g~~i~~d~lviAtG~~p~~~ 110 (454)
+.+. ..|.+.+|+++.+|.+|+|+|.+|...
T Consensus 262 ~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 262 SLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp EECTTSCEEEEETTSCEEEESEEEECSCEEECCG
T ss_pred EEcCCceEEEEECCCcEEEcCEEEECCCCccccc
Confidence 7542 367777888999999999999988763
No 215
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.04 E-value=2.1e-05 Score=80.93 Aligned_cols=35 Identities=31% Similarity=0.353 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++||||||||+||++||..|++. |.+|+|+|+...
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~--G~~V~vlEK~~~ 52 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEA--GFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCG
T ss_pred cCCEEEECccHHHHHHHHHHHHC--CCcEEEEeccCC
Confidence 47999999999999999999998 899999999754
No 216
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.04 E-value=1.8e-05 Score=79.68 Aligned_cols=96 Identities=15% Similarity=0.203 Sum_probs=72.5
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. .+ +.+......+.+.+ +++++.+ ++..++
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----d~~~~~~l~~~l~~~GV~i~~~~~V~~i~ 250 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTEL--GVPVTVVASQDHVLP-----YE-----DADAALVLEESFAERGVRLFKNARAASVT 250 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHT--TCCEEEECSSSSSSC-----CS-----SHHHHHHHHHHHHHTTCEEETTCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCeEEEEEcCCcccc-----cc-----CHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 4699999999999999999998 889999999875421 11 11233344455555 9999865 888887
Q ss_pred Ccc--cEEEeccCcEEEecEEEEecCCCCCCC
Q psy1545 81 PRV--NCVITEKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~--~~v~~~~g~~i~~d~lviAtG~~p~~~ 110 (454)
.+. ..+.+.+|+++.+|.+|+|+|.+|+..
T Consensus 251 ~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 251 RTGAGVLVTMTDGRTVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp ECSSSEEEEETTSCEEEESEEEECCCEEECCS
T ss_pred EeCCEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 654 345566778999999999999988764
No 217
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.03 E-value=1.9e-05 Score=80.10 Aligned_cols=36 Identities=33% Similarity=0.419 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcC----------CCCeEEEECCCC
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLH----------PGESIGLVTPSG 37 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~----------~g~~v~lie~~~ 37 (454)
.+||+|||||+||+++|..|++.. .|.+|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 379999999999999999999910 289999999864
No 218
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.02 E-value=1.6e-05 Score=75.17 Aligned_cols=113 Identities=12% Similarity=0.098 Sum_probs=69.2
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCC
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLG 213 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 213 (454)
.+++|||+|+.|+.+|..|. |.+|+++++. .+-....... .+ .....+...+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~-------~~-----------------~~~~~~~~~~~ 63 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSE-------EV-----------------ENFPGFPEPIA 63 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCS-------CB-----------------CCSTTCSSCBC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccccc-------cc-----------------ccCCCCCCCCC
Confidence 57999999999999999886 9999999986 2211000000 00 00000000000
Q ss_pred -CccccccccccCccCCceEEEeCceEEEEEcC--CCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 214 -PDWHTQVNLHGSSRDTKITIEYSCEVERIVDS--EDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 214 -~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~--~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
.++.. .+.+.+++.|++++. ..+.++... ++ ..+.+.+.+|+++.+|.||+|+|.+|...
T Consensus 64 ~~~~~~--~l~~~~~~~gv~~~~-~~v~~i~~~~~~~--~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 64 GMELAQ--RMHQQAEKFGAKVEM-DEVQGVQHDATSH--PYPFTVRGYNGEYRAKAVILATGADPRKL 126 (325)
T ss_dssp HHHHHH--HHHHHHHHTTCEEEE-CCEEEEEECTTSS--SCCEEEEESSCEEEEEEEEECCCEEECCC
T ss_pred HHHHHH--HHHHHHHHcCCEEEe-eeEEEEEeccCCC--ceEEEEECCCCEEEeCEEEECcCCCcCCC
Confidence 00000 012233457999988 588888765 32 12567778888999999999999988654
No 219
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.02 E-value=1.4e-05 Score=80.04 Aligned_cols=95 Identities=19% Similarity=0.257 Sum_probs=69.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. .+ +.++.....+.+.+ +++++.+ ++..++
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 254 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVEL--GKKVRMIERNDHIGT-----IY-----DGDMAEYIYKEADKHHIEILTNENVKAFK 254 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT--TCEEEEECCGGGTTS-----SS-----CHHHHHHHHHHHHHTTCEEECSCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCeEEEEEeCCchhh-----cC-----CHHHHHHHHHHHHHcCcEEEcCCEEEEEE
Confidence 4799999999999999999998 899999999865321 11 12233344455555 9999854 888887
Q ss_pred CcccE--EEeccCcEEEecEEEEecCCCCCCC
Q psy1545 81 PRVNC--VITEKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~~~--v~~~~g~~i~~d~lviAtG~~p~~~ 110 (454)
.+.+. +.+ ++.++.+|.+|+|+|.+|..+
T Consensus 255 ~~~~v~~v~~-~~~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 255 GNERVEAVET-DKGTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp ESSBEEEEEE-TTEEEECSEEEECSCEEESCG
T ss_pred cCCcEEEEEE-CCCEEEcCEEEECcCCCcChH
Confidence 65432 444 455899999999999887653
No 220
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.02 E-value=1.8e-05 Score=77.08 Aligned_cols=139 Identities=11% Similarity=0.101 Sum_probs=77.0
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCc--chhhhHHHhhccCCCChhhhhhhcccccCCC-CC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPG--AAEFFQDSINKTNTAKPETIFKRMRYNTGGE-KG 209 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~ 209 (454)
..+|+|||||+.|+.+|..|+ |.+|+++++.+..... .... +.....+.+.+....+.........+..... -+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~-~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSG-FGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCC-CSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc-cccccccChhHHHHHHHcCCccccccccccceEEEecCCC
Confidence 568999999999999999996 9999999988764221 0000 1111222222210000000000000000000 00
Q ss_pred CCCC-----CccccccccccCccC--CceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCc
Q psy1545 210 PSLG-----PDWHTQVNLHGSSRD--TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNS 277 (454)
Q Consensus 210 ~~l~-----~~~~~~~~~~~~l~~--~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~ 277 (454)
..+. .....+-.+.+.+.+ .|++++++++|++++.+++ .+.+.+++|+++.+|+||.|.|.....
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~---~v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 84 ERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSE---TVQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp CEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSS---CEEEEETTSCEEEESEEEECCCTTCHH
T ss_pred CccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCC---EEEEEECCCCEEECCEEEECCCcchhH
Confidence 0000 000000011111211 3899999999999987653 477889999899999999999997654
No 221
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.01 E-value=8.5e-06 Score=77.26 Aligned_cols=113 Identities=13% Similarity=0.075 Sum_probs=68.9
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEe----CCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVK----DKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEK 208 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~----~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (454)
..+++|||+|+.|+.+|..|+ |.+|+++++ ...+-..+.... .+.....+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~------------------------~~~~~~~~ 63 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTT------------------------DVENFPGF 63 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCS------------------------EECCSTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecc------------------------ccccCCCC
Confidence 358999999999999999986 999999987 221111000000 00000000
Q ss_pred CCCCC-CccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 209 GPSLG-PDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 209 ~~~l~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
...+. .++.. .+.+.+++.|++++.++ +.++...++ .+.+.+ +|.++.+|.||+|+|.+|...
T Consensus 64 ~~~~~~~~~~~--~l~~~~~~~gv~~~~~~-v~~i~~~~~---~~~v~~-~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 64 PEGILGVELTD--KFRKQSERFGTTIFTET-VTKVDFSSK---PFKLFT-DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp TTCEEHHHHHH--HHHHHHHHTTCEEECCC-CCEEECSSS---SEEEEC-SSEEEEEEEEEECCCEEECCC
T ss_pred ccCCCHHHHHH--HHHHHHHHCCCEEEEeE-EEEEEEcCC---EEEEEE-CCcEEEcCEEEECCCCCcCCC
Confidence 00000 00111 12233355799999986 888876542 456666 778899999999999988654
No 222
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.01 E-value=1.4e-05 Score=78.08 Aligned_cols=51 Identities=12% Similarity=0.165 Sum_probs=40.1
Q ss_pred ccCccCCceEEEeCceEEEEEcC----CCCccceEEEecCCcEEecCEEEEeeccCcCc
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDS----EDDTCNAYVKLTNGHTHACDIVVSAIGVVPNS 277 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~----~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~ 277 (454)
.+.+++.||++++++.++++..+ ++ .+.+.+++| ++.+|.||+|+|..+..
T Consensus 116 ~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~---~~~v~~~~g-~i~ad~VVlAtG~~s~p 170 (401)
T 2gqf_A 116 KSECDKYGAKILLRSEVSQVERIQNDEKV---RFVLQVNST-QWQCKNLIVATGGLSMP 170 (401)
T ss_dssp HHHHHHHTCEEECSCCEEEEEECCSCSSC---CEEEEETTE-EEEESEEEECCCCSSCG
T ss_pred HHHHHHCCCEEEeCCEEEEEEcccCcCCC---eEEEEECCC-EEECCEEEECCCCccCC
Confidence 34456689999999999999854 32 366777766 79999999999998843
No 223
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.01 E-value=2e-05 Score=78.61 Aligned_cols=96 Identities=18% Similarity=0.216 Sum_probs=70.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHH-hc-CcEEEcc-eEEEE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKF-EG-LCTVIVD-TVAAI 79 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~i~~~~~-~v~~i 79 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. .+ +.+......+.+ .+ +++++.+ ++..+
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----d~~~~~~l~~~l~~~~gv~i~~~~~v~~i 242 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARL--GAEVTVVEFAPRCAP-----TL-----DEDVTNALVGALAKNEKMKFMTSTKVVGG 242 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSST-----TS-----CHHHHHHHHHHHHHHTCCEEECSCEEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHh--CCEEEEEecCCcccc-----cC-----CHHHHHHHHHHHhhcCCcEEEeCCEEEEE
Confidence 4799999999999999999998 899999999875421 11 122334445556 55 9999865 88888
Q ss_pred eCcc--cEEEec--cC--cEEEecEEEEecCCCCCCC
Q psy1545 80 DPRV--NCVITE--KQ--NRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 80 ~~~~--~~v~~~--~g--~~i~~d~lviAtG~~p~~~ 110 (454)
+.+. ..+.+. +| +++.+|.+|+|+|.+|+..
T Consensus 243 ~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 243 TNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp EECSSSEEEEEECC---EEEEEESEEEECSCEEECCT
T ss_pred EEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCC
Confidence 7654 345554 56 5799999999999988754
No 224
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.01 E-value=2.1e-05 Score=79.10 Aligned_cols=109 Identities=13% Similarity=0.176 Sum_probs=66.7
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCC
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLG 213 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 213 (454)
+||||||||+.|+.+|..|. +.+||+|++++.+. +.|.+-+.. ...+.
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~---~~PlL~~va---------------------------~G~l~ 92 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFL---FTPLLPSAP---------------------------VGTVD 92 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEE---CGGGGGGTT---------------------------TTSSC
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcc---cccchhHHh---------------------------hcccc
Confidence 58999999999999999996 88999999887542 111111100 00000
Q ss_pred Cc-cccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEe------------------cCCcEEecCEEEEeeccC
Q psy1545 214 PD-WHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL------------------TNGHTHACDIVVSAIGVV 274 (454)
Q Consensus 214 ~~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~------------------~~g~~~~~D~vi~a~G~~ 274 (454)
++ +...+.-....++.+++++.+ .+++|+.+.+ .+.+.. .++.++++|.+|+|+|.+
T Consensus 93 ~~~i~~p~~~~~~~~~~~v~~~~~-~v~~ID~~~k---~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~ 168 (502)
T 4g6h_A 93 EKSIIEPIVNFALKKKGNVTYYEA-EATSINPDRN---TVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAE 168 (502)
T ss_dssp GGGGEEEHHHHHTTCSSCEEEEEE-EEEEEEGGGT---EEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCE
T ss_pred HHHhhhhHHHHHHhhcCCeEEEEE-EEEEEEhhhC---EEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcc
Confidence 00 000000000113467888876 6888877652 333322 345789999999999999
Q ss_pred cCcc
Q psy1545 275 PNSN 278 (454)
Q Consensus 275 p~~~ 278 (454)
|+..
T Consensus 169 ~~~~ 172 (502)
T 4g6h_A 169 PNTF 172 (502)
T ss_dssp ECCT
T ss_pred cccC
Confidence 9864
No 225
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.01 E-value=2e-05 Score=79.09 Aligned_cols=98 Identities=15% Similarity=0.236 Sum_probs=73.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCC-CCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHP-GESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAI 79 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~-g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i 79 (454)
.+++|||||+.|+.+|..|++..+ +.+|+++++.+.+. +.+ +.+......+.+.+ +++++.+ ++..+
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-----~~~-----d~~~~~~l~~~l~~~GV~i~~~~~v~~i 257 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-----RGF-----DSELRKQLTEQLRANGINVRTHENPAKV 257 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-----TTS-----CHHHHHHHHHHHHHTTEEEEETCCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-----ccc-----CHHHHHHHHHHHHhCCCEEEeCCEEEEE
Confidence 479999999999999999998632 78999999987532 111 12233344455555 9999865 88888
Q ss_pred eCcc---cEEEeccCcEEEecEEEEecCCCCCCC
Q psy1545 80 DPRV---NCVITEKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 80 ~~~~---~~v~~~~g~~i~~d~lviAtG~~p~~~ 110 (454)
+.+. ..|.+.+|+++.+|.+|+|+|.+|...
T Consensus 258 ~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 258 TKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp EECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred EEcCCCEEEEEECCCcEEEcCEEEEccCCCcCcc
Confidence 7542 367777888999999999999988764
No 226
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.00 E-value=2.2e-05 Score=76.57 Aligned_cols=138 Identities=13% Similarity=0.039 Sum_probs=76.6
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhh-----hhhcccccC---
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETI-----FKRMRYNTG--- 205 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~--- 205 (454)
.+|+|||||+.|+.+|..|+ |.+|+++++.+..........+.....+.+.+.. ...... .....+...
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAG-LLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTT-CHHHHHHTTCEEECEEEEEETTE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcC-cHHHHHHhCCCcceeEEEeCCCC
Confidence 57999999999999999996 9999999987654211001111111111111100 000000 000000000
Q ss_pred -------CCCC-CCCCCccccc---cccccCccCC-ceEEEeCceEEEEEcCCCCccce--EEEecCCcEEecCEEEEee
Q psy1545 206 -------GEKG-PSLGPDWHTQ---VNLHGSSRDT-KITIEYSCEVERIVDSEDDTCNA--YVKLTNGHTHACDIVVSAI 271 (454)
Q Consensus 206 -------~~~~-~~l~~~~~~~---~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~--~v~~~~g~~~~~D~vi~a~ 271 (454)
.... +..+..+.+. ..+.+.+++. |++++++++|++++.+++ .+ .+++++|+++++|+||.|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~---~v~g~v~~~~g~~~~ad~vV~Ad 162 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDER---HAIDQVRLNDGRVLRPRVVVGAD 162 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTT---SCEEEEEETTSCEEEEEEEEECC
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCC---ceEEEEEECCCCEEECCEEEECC
Confidence 0000 0000000100 0123444555 999999999999987653 35 7888899899999999999
Q ss_pred ccCcCc
Q psy1545 272 GVVPNS 277 (454)
Q Consensus 272 G~~p~~ 277 (454)
|..+..
T Consensus 163 G~~s~v 168 (399)
T 2x3n_A 163 GIASYV 168 (399)
T ss_dssp CTTCHH
T ss_pred CCChHH
Confidence 998754
No 227
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.99 E-value=2.2e-05 Score=78.00 Aligned_cols=96 Identities=22% Similarity=0.261 Sum_probs=69.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. . ..+.++.....+.+.+ +++++.+ ++..++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~l~--------~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 218 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQ--NYNVNLIDGHERVLY--------K-YFDKEFTDILAKDYEAHGVNLVLGSKVAAFE 218 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSTTT--------T-TSCHHHHHHHHHHHHHTTCEEEESSCEEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhc--CCEEEEEEcCCchhh--------h-hhhhhHHHHHHHHHHHCCCEEEcCCeeEEEE
Confidence 4699999999999999999998 889999998765311 0 0112233344455555 9999865 888887
Q ss_pred Cccc---EEEeccCcEEEecEEEEecCCCCCCC
Q psy1545 81 PRVN---CVITEKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~~---~v~~~~g~~i~~d~lviAtG~~p~~~ 110 (454)
..+. .+.+ +|+++.+|.+|+|+|.+|...
T Consensus 219 ~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 219 EVDDEIITKTL-DGKEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp EETTEEEEEET-TSCEEEESEEEECCCEEECCG
T ss_pred cCCCeEEEEEe-CCCEEECCEEEECcCCCCCHH
Confidence 5222 2344 678899999999999987653
No 228
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.99 E-value=1.7e-05 Score=80.47 Aligned_cols=127 Identities=16% Similarity=0.191 Sum_probs=72.0
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcccccc---CCc-----chhhhHHHhhccCCCChhhhhhhcccccC
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFL---DPG-----AAEFFQDSINKTNTAKPETIFKRMRYNTG 205 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~---d~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 205 (454)
.+++|||||+.|+.+|..|. |.+|+++++.+.+-..+. -|. ....+...+.. .....
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~-------------~~~~~ 76 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALK-------------GIIPE 76 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHT-------------TSSTT
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCc-------------ccccC
Confidence 58999999999999999986 999999998865422110 000 00001000000 00000
Q ss_pred CCCCCCCC--CccccccccccCccCCce--EEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeec--cCcCcc
Q psy1545 206 GEKGPSLG--PDWHTQVNLHGSSRDTKI--TIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIG--VVPNSN 278 (454)
Q Consensus 206 ~~~~~~l~--~~~~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G--~~p~~~ 278 (454)
......+. +++... +.+..++.|+ .++.++.|++++.+++ ...+.|.+++|+++.+|.||+|+| .+|..+
T Consensus 77 ~~~~~~~~~~~ei~~y--l~~~~~~~~l~~~i~~~~~V~~~~~~~~-~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p 152 (545)
T 3uox_A 77 WEWSENFASQPEMLRY--VNRAADAMDVRKHYRFNTRVTAARYVEN-DRLWEVTLDNEEVVTCRFLISATGPLSASRMP 152 (545)
T ss_dssp CCCSBSSCBHHHHHHH--HHHHHHHHTCGGGEECSCCEEEEEEEGG-GTEEEEEETTTEEEEEEEEEECCCSCBC---C
T ss_pred CCccccCCCHHHHHHH--HHHHHHHcCCcCcEEECCEEEEEEEeCC-CCEEEEEECCCCEEEeCEEEECcCCCCCCcCC
Confidence 00000000 111111 1222244555 7888999999876542 336788999999999999999999 566543
No 229
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=1.6e-05 Score=79.37 Aligned_cols=97 Identities=14% Similarity=0.199 Sum_probs=71.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. .+ +.++.....+.+.+ +++++.+ ++..++
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtli~~~~~~l~-----~~-----~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 245 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRI--GSEVTVVEFASEIVP-----TM-----DAEIRKQFQRSLEKQGMKFKLKTKVVGVD 245 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHH--TCEEEEECSSSSSST-----TS-----CHHHHHHHHHHHHHSSCCEECSEEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCCcccc-----cc-----cHHHHHHHHHHHHHcCCEEEeCCEEEEEE
Confidence 4799999999999999999998 899999999875421 11 12233334455555 9999865 889998
Q ss_pred Cccc--EEEec---cC--cEEEecEEEEecCCCCCCCC
Q psy1545 81 PRVN--CVITE---KQ--NRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~~~--~v~~~---~g--~~i~~d~lviAtG~~p~~~~ 111 (454)
.+.. .+.+. +| +++.+|.+|+|+|.+|....
T Consensus 246 ~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 283 (470)
T 1dxl_A 246 TSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSG 283 (470)
T ss_dssp CSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTT
T ss_pred EcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCC
Confidence 6542 44443 34 68999999999999887643
No 230
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.98 E-value=4.7e-06 Score=83.31 Aligned_cols=41 Identities=27% Similarity=0.326 Sum_probs=35.8
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCC--eEEEECCCCcccccc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGE--SIGLVTPSGIVKAVT 43 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~--~v~lie~~~~~~~~~ 43 (454)
|++||+|||||++|++||++|++. |. +|+|+|+++..++..
T Consensus 1 m~~dVvVIGaGiaGLsaA~~L~~~--G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 1 MGRTVVVLGGGISGLAASYHLSRA--PCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp -CCEEEEECCBHHHHHHHHHHHTS--SSCCEEEEECSSSSSBTTC
T ss_pred CCceEEEECCcHHHHHHHHHHHhC--CCCCcEEEEeCCCCCCCce
Confidence 778999999999999999999998 77 999999988776543
No 231
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.96 E-value=1.6e-05 Score=78.87 Aligned_cols=109 Identities=17% Similarity=0.194 Sum_probs=69.0
Q ss_pred CCeEEEEcCchhHHHHHHHhc----CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS----NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGP 210 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~----g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (454)
.++++|||||+.|+.+|..|+ +.+|+++++.+.+... ...+...+... ..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~--~~~~p~~~~~~-~~----------------------- 56 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHA--PCGIPYVVEGL-ST----------------------- 56 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccC--CcCCccccCCC-CC-----------------------
Confidence 478999999999999999885 6799999988754210 00000000000 00
Q ss_pred CCCCccccccccccCc-cCCceEEEeCceEEEEEcCCCCccceEEEecCC-cEEecCEEEEeeccCcCcc
Q psy1545 211 SLGPDWHTQVNLHGSS-RDTKITIEYSCEVERIVDSEDDTCNAYVKLTNG-HTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 211 ~l~~~~~~~~~~~~~l-~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g-~~~~~D~vi~a~G~~p~~~ 278 (454)
..++.. ...+.+ ++.|++++.++.+.++.... ..+.++++ .++.+|.+|+|||.+|..+
T Consensus 57 --~~~~~~--~~~~~~~~~~gi~v~~~~~v~~i~~~~-----~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 57 --PDKLMY--YPPEVFIKKRGIDLHLNAEVIEVDTGY-----VRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp -------------CTHHHHTTCEEETTCEEEEECSSE-----EEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred --HHHhhh--cCHHHHHHhcCcEEEecCEEEEEecCC-----CEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 000000 011222 45799999999999997653 45667777 4899999999999988754
No 232
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.96 E-value=3.2e-05 Score=77.51 Aligned_cols=97 Identities=20% Similarity=0.280 Sum_probs=73.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||+|+.|+.+|..+++. +.+|+++++.+.+.. .+ +.++.....+.+.+ +++++.+ ++..++
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~--g~~Vtli~~~~~~l~-----~~-----~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~ 259 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGL--GVKTTLLHRGDLILR-----NF-----DYDLRQLLNDAMVAKGISIIYEATVSQVQ 259 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSST-----TS-----CHHHHHHHHHHHHHHTCEEESSCCEEEEE
T ss_pred CcEEEECcCHHHHHHHHHHHHc--CCeEEEEECCCcccc-----cc-----CHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 4799999999999999999998 889999999875321 11 12233344455555 9999864 888887
Q ss_pred Cccc--EEEeccCcEEEecEEEEecCCCCCCCC
Q psy1545 81 PRVN--CVITEKQNRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~~~--~v~~~~g~~i~~d~lviAtG~~p~~~~ 111 (454)
.+.. .|.+.+|+++.+|.+|+|+|.+|....
T Consensus 260 ~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 260 STENCYNVVLTNGQTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp ECSSSEEEEETTSCEEEESEEEECCCEEECCTT
T ss_pred eeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCC
Confidence 6432 567778889999999999999876653
No 233
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.96 E-value=2.3e-05 Score=79.18 Aligned_cols=115 Identities=11% Similarity=0.149 Sum_probs=71.8
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCC-cchhhhHHHhhccCCCChhhhhhhcccccCCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDP-GAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPS 211 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (454)
..+++|||||+.|+.+|..++ |.+|+++++.. -....+. .+.... .....
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~--GG~~~~~~~~~~~~-------------------------~~~~~ 264 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF--GGQVLDTVDIENYI-------------------------SVPKT 264 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST--TGGGTTCSCBCCBT-------------------------TBSSB
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC--CCcccccccccccC-------------------------CCCCC
Confidence 457999999999999999886 89999997521 1110000 000000 00000
Q ss_pred CCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 212 LGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 212 l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
-.+++.. .+.+.+++.|++++.++++.++....+.+..+.+.+++|.++.+|.||+|+|.+|...
T Consensus 265 ~~~~l~~--~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~ 329 (521)
T 1hyu_A 265 EGQKLAG--ALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNM 329 (521)
T ss_dssp CHHHHHH--HHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred CHHHHHH--HHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCC
Confidence 0001111 1223335689999999999999754211225678888898999999999999987653
No 234
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.96 E-value=3.8e-05 Score=77.10 Aligned_cols=97 Identities=16% Similarity=0.142 Sum_probs=69.6
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhcCcEEEcc-eEEEEeC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEGLCTVIVD-TVAAIDP 81 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~v~~i~~ 81 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. .+ +.+......+.+.+.++++.+ ++..+..
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----d~~~~~~l~~~l~~~V~i~~~~~v~~i~~ 242 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRL--GVIVKVFGRSGSVAN-----LQ-----DEEMKRYAEKTFNEEFYFDAKARVISTIE 242 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHT--TCEEEEECCTTCCTT-----CC-----CHHHHHHHHHHHHTTSEEETTCEEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCeEEEEEECCcccc-----cC-----CHHHHHHHHHHHhhCcEEEECCEEEEEEE
Confidence 4799999999999999999998 899999999875421 11 112333333444446888754 7888865
Q ss_pred ccc--EEEec--cC--cEEEecEEEEecCCCCCCCC
Q psy1545 82 RVN--CVITE--KQ--NRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 82 ~~~--~v~~~--~g--~~i~~d~lviAtG~~p~~~~ 111 (454)
+.. .+.+. +| .++.+|.+|+|+|.+|....
T Consensus 243 ~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 243 KEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp CSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSS
T ss_pred cCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCC
Confidence 432 34443 56 68999999999999887654
No 235
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.95 E-value=2.7e-05 Score=72.82 Aligned_cols=103 Identities=15% Similarity=0.101 Sum_probs=63.1
Q ss_pred eEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcc------ccccCCc--chhhhHHHhhccCCCChhhhhhhcccccCC
Q psy1545 137 KIVVIGNGGIATELVHELS--NVDIVWVVKDKHIS------ATFLDPG--AAEFFQDSINKTNTAKPETIFKRMRYNTGG 206 (454)
Q Consensus 137 ~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~------~~~~d~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 206 (454)
.++|||+|+.|+.+|..++ |.+|+++++...-- +.+...+ ....+.+..
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 66 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIG--------------------- 66 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHH---------------------
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHH---------------------
Confidence 6899999999999998775 99999999753210 0000000 000010100
Q ss_pred CCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 207 EKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 207 ~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
+.+..+..++.++.. .+..+...++ ....+.+.+|+++++|.||+|||.+|..+
T Consensus 67 ---------------~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~v~~~~g~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 67 ---------------LNEVMKYPSVHYYEK-TVVMITKQST--GLFEIVTKDHTKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp ---------------HHHHTTSTTEEEEEC-CEEEEEECTT--SCEEEEETTCCEEEEEEEEECCCCEEECC
T ss_pred ---------------HHHHHhcCCEEEEee-EEEEeeecCC--CcEEEEECCCCEEEeCEEEEccCCccccc
Confidence 011112245666655 4445544331 25678889999999999999999988754
No 236
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.94 E-value=3.8e-05 Score=72.21 Aligned_cols=93 Identities=17% Similarity=0.209 Sum_probs=68.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||+|+.|+.+|..|++. +.+|+++++.+.+.. ...+.....+.+.+ +++++.+ ++..++
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~~------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 211 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNI--ASEVHLIHRRDGFRA------------EKILIKRLMDKVENGNIILHTNRTLEEVT 211 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT--SSEEEEECSSSSCCC------------CHHHHHHHHHHHHTSSEEEECSCEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCeEEEEEeCCcccc------------CHHHHHHHHHhcccCCeEEEcCceeEEEE
Confidence 4799999999999999999998 889999998765410 11222334455566 9999855 888887
Q ss_pred Ccc-c--EEEecc----C--cEEEecEEEEecCCCCCC
Q psy1545 81 PRV-N--CVITEK----Q--NRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~~~-~--~v~~~~----g--~~i~~d~lviAtG~~p~~ 109 (454)
.+. + .|.+.+ | .++.+|.+|+|+|.+|..
T Consensus 212 ~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 249 (320)
T 1trb_A 212 GDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNT 249 (320)
T ss_dssp ECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESC
T ss_pred cCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCCh
Confidence 654 2 255543 4 579999999999988764
No 237
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.93 E-value=4.1e-05 Score=76.87 Aligned_cols=98 Identities=16% Similarity=0.176 Sum_probs=70.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcC--CCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLH--PGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAA 78 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~--~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~ 78 (454)
.+++|||||+.|+.+|..|++.. .+.+|+++++.+... ...+ +..+.....+.+.+ +++++.+ .+..
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~--------~~~l-~~~~~~~~~~~l~~~GV~v~~~~~V~~ 251 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM--------GKIL-PEYLSNWTMEKVRREGVKVMPNAIVQS 251 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT--------TTTS-CHHHHHHHHHHHHTTTCEEECSCCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc--------cccC-CHHHHHHHHHHHHhcCCEEEeCCEEEE
Confidence 47999999999999999998731 167999998875321 0111 11233334455666 9999866 8888
Q ss_pred EeCcc--cEEEeccCcEEEecEEEEecCCCCCC
Q psy1545 79 IDPRV--NCVITEKQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 79 i~~~~--~~v~~~~g~~i~~d~lviAtG~~p~~ 109 (454)
++.+. ..|.+.+|+++.+|.+|+|+|.+|..
T Consensus 252 i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 252 VGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred EEecCCeEEEEECCCCEEECCEEEECCCCCccH
Confidence 86533 25677788899999999999998765
No 238
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.92 E-value=3.1e-05 Score=79.16 Aligned_cols=95 Identities=17% Similarity=0.270 Sum_probs=69.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.... .+ +.+......+.+.+ +++++.+ ++..++
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----~~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 219 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHL--GIKTTLLELADQVMT-----PV-----DREMAGFAHQAIRDQGVDLRLGTALSEVS 219 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSSSCT-----TS-----CHHHHHHHHHHHHHTTCEEEETCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCcEEEEEcCCccch-----hc-----CHHHHHHHHHHHHHCCCEEEeCCeEEEEe
Confidence 3799999999999999999998 899999999764311 11 11223333445555 9999854 888876
Q ss_pred Cc-------------------c--cEEEeccCcEEEecEEEEecCCCCCC
Q psy1545 81 PR-------------------V--NCVITEKQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~~-------------------~--~~v~~~~g~~i~~d~lviAtG~~p~~ 109 (454)
.+ . ..+.+.+|+++.+|.+|+|+|.+|..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 220 YQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp EECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred ccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 51 2 24566788899999999999988764
No 239
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.91 E-value=3.2e-05 Score=77.00 Aligned_cols=51 Identities=20% Similarity=0.303 Sum_probs=37.6
Q ss_pred cCCceE--EEeCceEEEEEcCCCCccceEEEecC---C--cEEecCEEEEeec--cCcCcc
Q psy1545 227 RDTKIT--IEYSCEVERIVDSEDDTCNAYVKLTN---G--HTHACDIVVSAIG--VVPNSN 278 (454)
Q Consensus 227 ~~~gv~--i~~~~~v~~i~~~~~~~~~~~v~~~~---g--~~~~~D~vi~a~G--~~p~~~ 278 (454)
++.|++ +++++.|++++..++ ...+.|.+.+ | .++.+|.||+|+| ..|+.+
T Consensus 112 ~~~gv~~~i~~~~~V~~v~~~~~-~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~~p 171 (464)
T 2xve_A 112 EKAGVRKYIRFNTAVRHVEFNED-SQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPYVP 171 (464)
T ss_dssp HHHTCGGGEECSEEEEEEEEETT-TTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBCCC
T ss_pred HHcCCcceEEeCCEEEEEEEcCC-CCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCccC
Confidence 445887 899999999986542 2245676655 4 5789999999999 677654
No 240
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.90 E-value=4.1e-05 Score=76.31 Aligned_cols=94 Identities=15% Similarity=0.260 Sum_probs=70.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+-. + +.++.....+.+.+ +++++.+ ++..++
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~l~------~-----~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 243 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARL--GSKVTVLARNTLFFR------E-----DPAIGEAVTAAFRAEGIEVLEHTQASQVA 243 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCTTTT------S-----CHHHHHHHHHHHHHTTCEEETTCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCEEEEEEECCccCC------C-----CHHHHHHHHHHHHhCCCEEEcCCEEEEEE
Confidence 4799999999999999999998 889999999775311 1 12233444455555 9999865 888887
Q ss_pred Cccc--EEEeccCcEEEecEEEEecCCCCCCC
Q psy1545 81 PRVN--CVITEKQNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~~--~v~~~~g~~i~~d~lviAtG~~p~~~ 110 (454)
.+.. .+.++ +.++.+|.+|+|+|.+|...
T Consensus 244 ~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 244 HMDGEFVLTTT-HGELRADKLLVATGRTPNTR 274 (467)
T ss_dssp EETTEEEEEET-TEEEEESEEEECSCEEESCT
T ss_pred EeCCEEEEEEC-CcEEEcCEEEECCCCCcCCC
Confidence 5543 34554 56899999999999987753
No 241
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.88 E-value=5.3e-05 Score=76.04 Aligned_cols=97 Identities=18% Similarity=0.168 Sum_probs=70.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.... . .+.+......+.+.+ +++++.+ ++..+.
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~l~-----~-----~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~ 266 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARL--GAKVTVVEFLDTILG-----G-----MDGEVAKQLQRMLTKQGIDFKLGAKVTGAV 266 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSSSS-----S-----SCHHHHHHHHHHHHHTTCEEECSEEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCEEEEEeccccccc-----c-----CCHHHHHHHHHHHHhCCCEEEECCeEEEEE
Confidence 4699999999999999999998 889999998875421 1 112233344455555 9999865 888886
Q ss_pred Cccc--EEEecc---C--cEEEecEEEEecCCCCCCCC
Q psy1545 81 PRVN--CVITEK---Q--NRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~~~--~v~~~~---g--~~i~~d~lviAtG~~p~~~~ 111 (454)
.+.. .+.+.+ | +++.+|.+|+|+|.+|....
T Consensus 267 ~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 267 KSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTT
T ss_pred EeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCc
Confidence 5443 344442 4 57999999999999887653
No 242
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.88 E-value=2.8e-05 Score=73.76 Aligned_cols=111 Identities=12% Similarity=0.148 Sum_probs=68.3
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcccccc-CCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFL-DPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPS 211 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~-d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (454)
..+++|||+|+.|+.+|..|. |.+|+++++.. +-..+. ..... ....+...
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~-------------------------~~~~~~~~ 67 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGALMTTTDVE-------------------------NYPGFRNG 67 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSCGGGSCSCBC-------------------------CSTTCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCceeccchhh-------------------------hcCCCCCC
Confidence 468999999999999999886 99999998531 111000 00000 00000000
Q ss_pred CC-CccccccccccCccCCceEEEeCceEEEEEcCCCCccceEE-EecCCcEEecCEEEEeeccCcCcc
Q psy1545 212 LG-PDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYV-KLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 212 l~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v-~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
+. +++... +.+.+++.|++++.++ +.+++..+ .+.+ .+++|+++.+|.||+|+|.+|...
T Consensus 68 ~~~~~~~~~--l~~~~~~~~v~~~~~~-v~~i~~~~----~~~v~~~~~g~~~~~d~lviAtG~~~~~~ 129 (335)
T 2a87_A 68 ITGPELMDE--MREQALRFGADLRMED-VESVSLHG----PLKSVVTADGQTHRARAVILAMGAAARYL 129 (335)
T ss_dssp BCHHHHHHH--HHHHHHHTTCEEECCC-EEEEECSS----SSEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred CCHHHHHHH--HHHHHHHcCCEEEEee-EEEEEeCC----cEEEEEeCCCCEEEeCEEEECCCCCccCC
Confidence 00 011111 1222345799999986 88887622 3566 777888899999999999988654
No 243
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.87 E-value=4.8e-05 Score=73.06 Aligned_cols=101 Identities=20% Similarity=0.189 Sum_probs=65.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccc-cccchhhhHHHHHhc-C-cEEEcc-eEEE
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLL-SDITVEETDANKFEG-L-CTVIVD-TVAA 78 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~-i~~~~~-~v~~ 78 (454)
.+|+|||||..|+.+|..|++. +.+|+++++.+.... +.+.... ..........+.+.+ + ++++.+ ++..
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~~~----~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~ 240 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKN--GSDIALYTSTTGLND----PDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKD 240 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECC--------------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEE
T ss_pred CEEEEECCCcCHHHHHHHHHhc--CCeEEEEecCCCCCC----CCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEE
Confidence 3799999999999999999998 889999999865421 0010000 011122333444555 6 999855 8888
Q ss_pred Ee--CcccEEEeccCcEEE-ecEEEEecCCCCCC
Q psy1545 79 ID--PRVNCVITEKQNRIK-YKTLCICTGASPRK 109 (454)
Q Consensus 79 i~--~~~~~v~~~~g~~i~-~d~lviAtG~~p~~ 109 (454)
++ .+...+.+.+|+.+. +|.+|+|||.+|..
T Consensus 241 i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 241 IDFNNGQYHISFDSGQSVHTPHEPILATGFDATK 274 (369)
T ss_dssp EEEETTEEEEEESSSCCEEESSCCEECCCBCGGG
T ss_pred EEecCCceEEEecCCeEeccCCceEEeeccCCcc
Confidence 84 333356777887665 59999999998765
No 244
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.86 E-value=5.4e-05 Score=75.35 Aligned_cols=96 Identities=15% Similarity=0.171 Sum_probs=72.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..+++. +.+|+++++.+... +.+ +.+......+.+.+ +++++.+ .+..++
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~--g~~Vt~v~~~~~~l-----~~~-----~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 238 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGL--GVKTTLIYRGKEIL-----SRF-----DQDMRRGLHAAMEEKGIRILCEDIIQSVS 238 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSS-----TTS-----CHHHHHHHHHHHHHTTCEEECSCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCeEEEEEcCCccc-----ccc-----CHHHHHHHHHHHHHCCCEEECCCEEEEEE
Confidence 4799999999999999999998 88999999987531 111 12233444455555 9999864 888887
Q ss_pred Ccc---cEEE-eccCcEEEecEEEEecCCCCCCCC
Q psy1545 81 PRV---NCVI-TEKQNRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~~---~~v~-~~~g~~i~~d~lviAtG~~p~~~~ 111 (454)
.+. ..|. +.+|+ +.+|.+|+|+|.+|....
T Consensus 239 ~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 239 ADADGRRVATTMKHGE-IVADQVMLALGRMPNTNG 272 (463)
T ss_dssp ECTTSCEEEEESSSCE-EEESEEEECSCEEESCTT
T ss_pred EcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCC
Confidence 642 2577 77787 999999999999887653
No 245
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.86 E-value=4.3e-05 Score=71.89 Aligned_cols=110 Identities=13% Similarity=0.072 Sum_probs=67.0
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcccccc-CCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFL-DPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPS 211 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~-d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (454)
..+++|||+|+.|+.+|..|+ |.+|+++++.. +-.... ..... ....+ ..
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~-------------------------~~~~~-~~ 68 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGLTAEAPLVE-------------------------NYLGF-KS 68 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGGGGGCSCBC-------------------------CBTTB-SS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCccccccchhh-------------------------hcCCC-cc
Confidence 358999999999999999886 99999999842 111000 00000 00000 00
Q ss_pred CC-CccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 212 LG-PDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 212 l~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
+. .++.. .+.+.+++.|++++. ..+.++...++ .+.+.+ ++.++.+|.+|+|+|..|...
T Consensus 69 ~~~~~~~~--~~~~~~~~~~v~~~~-~~v~~i~~~~~---~~~v~~-~~~~~~~~~li~AtG~~~~~~ 129 (319)
T 3cty_A 69 IVGSELAK--LFADHAANYAKIREG-VEVRSIKKTQG---GFDIET-NDDTYHAKYVIITTGTTHKHL 129 (319)
T ss_dssp BCHHHHHH--HHHHHHHTTSEEEET-CCEEEEEEETT---EEEEEE-SSSEEEEEEEEECCCEEECCC
T ss_pred cCHHHHHH--HHHHHHHHcCCEEEE-eeEEEEEEeCC---EEEEEE-CCCEEEeCEEEECCCCCcccC
Confidence 00 00000 012233557999988 68888876542 345655 566899999999999987654
No 246
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.85 E-value=4.4e-05 Score=76.20 Aligned_cols=97 Identities=15% Similarity=0.247 Sum_probs=70.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. ++.+|+++++.+.... . ..+.++.....+.+.+ +++++.+ ++..++
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~-~g~~Vtlv~~~~~~l~--------~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 229 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADM-WGIDTTVVELADQIMP--------G-FTSKSLSQMLRHDLEKNDVVVHTGEKVVRLE 229 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-HCCEEEEECSSSSSST--------T-TSCHHHHHHHHHHHHHTTCEEECSCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHh-cCCcEEEEEccCcccc--------c-ccCHHHHHHHHHHHHhcCCEEEeCCEEEEEE
Confidence 4799999999999999999986 2679999998764311 0 0112233344455555 9999865 888887
Q ss_pred Cccc--EEEeccCcEEEecEEEEecCCCCCC
Q psy1545 81 PRVN--CVITEKQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~~~~--~v~~~~g~~i~~d~lviAtG~~p~~ 109 (454)
.++. .+.+.+|+++.+|.+|+|+|.+|..
T Consensus 230 ~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 230 GENGKVARVITDKRTLDADLVILAAGVSPNT 260 (472)
T ss_dssp ESSSBEEEEEESSCEEECSEEEECSCEEECC
T ss_pred ccCCeEEEEEeCCCEEEcCEEEECCCCCcCH
Confidence 6332 4667788899999999999988764
No 247
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.85 E-value=3.8e-05 Score=76.06 Aligned_cols=51 Identities=24% Similarity=0.197 Sum_probs=41.6
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
.+.+++.||++++++.|+++..++ +..+.|.+++|+++.+|.||+|+|..+
T Consensus 141 ~~~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 141 LTRLKDLGVKIRTNTPVETIEYEN--GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHCCCEEEeCcEEEEEEecC--CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 344566899999999999998644 234678888887899999999999987
No 248
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.84 E-value=6.8e-05 Score=74.89 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=71.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+.. .+ +.+......+.+.+ +++++.+ ++..++
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~-----~~-----~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~ 248 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARL--GAEVTVLEAMDKFLP-----AV-----DEQVAKEAQKILTKQGLKILLGARVTGTE 248 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSSSST-----TS-----CHHHHHHHHHHHHHTTEEEEETCEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCc-----cc-----CHHHHHHHHHHHHhCCCEEEECCEEEEEE
Confidence 4699999999999999999998 899999999875421 11 12233444455555 9999855 888887
Q ss_pred Cccc--EEEeccC---cEEEecEEEEecCCCCCCCC
Q psy1545 81 PRVN--CVITEKQ---NRIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~~~--~v~~~~g---~~i~~d~lviAtG~~p~~~~ 111 (454)
.+.. .+.+.++ +.+.+|.+|+|+|.+|....
T Consensus 249 ~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~ 284 (476)
T 3lad_A 249 VKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTD 284 (476)
T ss_dssp ECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTT
T ss_pred EcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCC
Confidence 5443 4555544 57999999999999887643
No 249
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.84 E-value=8.5e-06 Score=81.17 Aligned_cols=41 Identities=20% Similarity=0.182 Sum_probs=35.5
Q ss_pred eEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccC
Q psy1545 231 ITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVV 274 (454)
Q Consensus 231 v~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~ 274 (454)
++|++++.|++|+.+++ .+.|.+++|+++.+|.||+|++..
T Consensus 248 ~~i~~~~~V~~i~~~~~---~~~v~~~~g~~~~ad~vi~a~p~~ 288 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGS---CYSLELDNGVTLDADSVIVTAPHK 288 (470)
T ss_dssp EEEECSCCEEEEEECSS---SEEEEESSSCEEEESEEEECSCHH
T ss_pred CEEEeCCceEEEEEcCC---eEEEEECCCCEEECCEEEECCCHH
Confidence 79999999999987653 477888999889999999998764
No 250
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.83 E-value=5.1e-05 Score=78.97 Aligned_cols=35 Identities=20% Similarity=0.268 Sum_probs=32.0
Q ss_pred cccEEEECCCHHHHHHHHHHhh-----cCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAF-----LHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~~~g~~v~lie~~~~ 38 (454)
++||+|||||++|+++|..|++ . |.+|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~--Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP--DLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST--TCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC--CCCEEEEeCCCC
Confidence 4799999999999999999999 7 999999998743
No 251
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.82 E-value=8.1e-05 Score=72.28 Aligned_cols=134 Identities=19% Similarity=0.288 Sum_probs=75.8
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc------cccccCCcchhhhHHHhhccCCCChhhhh-----hhccc
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHI------SATFLDPGAAEFFQDSINKTNTAKPETIF-----KRMRY 202 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~------~~~~~d~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~ 202 (454)
.+|+|||||+.|+.+|..|+ |.+|+++++.+.. ....+.+...+.+.+ + .. ...... ....+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~-l---g~-~~~~~~~~~~~~~~~~ 77 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLRE-A---GV-DRRMARDGLVHEGVEI 77 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHH-T---TC-CHHHHHHCEEESCEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHH-c---CC-cHHHHhcCCccceEEE
Confidence 36999999999999999997 9999999987642 111122221111111 0 00 000000 00001
Q ss_pred ccCCC-----C----CCCC----C-CccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEe-cCCc--EEecC
Q psy1545 203 NTGGE-----K----GPSL----G-PDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL-TNGH--THACD 265 (454)
Q Consensus 203 ~~~~~-----~----~~~l----~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~-~~g~--~~~~D 265 (454)
..... . .... . ..+.. .+.+.+.+.|++++++++|++++.+++ ..+.+.+ ++|+ ++.+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~L~~~~~~~g~~i~~~~~v~~i~~~~~--~~~~v~~~~~g~~~~~~a~ 153 (394)
T 1k0i_A 78 AFAGQRRRIDLKRLSGGKTVTVYGQTEVTR--DLMEAREACGATTVYQAAEVRLHDLQG--ERPYVTFERDGERLRLDCD 153 (394)
T ss_dssp EETTEEEEECHHHHHTSCCEEECCHHHHHH--HHHHHHHHTTCEEESSCEEEEEECTTS--SSCEEEEEETTEEEEEECS
T ss_pred EECCceEEeccccccCCCceEEechHHHHH--HHHHHHHhcCCeEEeceeEEEEEEecC--CceEEEEecCCcEEEEEeC
Confidence 00000 0 0000 0 01111 123334456999999999999987532 2456777 6886 79999
Q ss_pred EEEEeeccCcCcc
Q psy1545 266 IVVSAIGVVPNSN 278 (454)
Q Consensus 266 ~vi~a~G~~p~~~ 278 (454)
+||.|.|......
T Consensus 154 ~vV~AdG~~S~vr 166 (394)
T 1k0i_A 154 YIAGCDGFHGISR 166 (394)
T ss_dssp EEEECCCTTCSTG
T ss_pred EEEECCCCCcHHH
Confidence 9999999987654
No 252
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.80 E-value=7.1e-05 Score=74.82 Aligned_cols=96 Identities=18% Similarity=0.153 Sum_probs=69.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+. +.+ +.+......+.+.+ +++++.+ ++..++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~l-----~~~-----d~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 255 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSAL--GSKTSLMIRHDKVL-----RSF-----DSMISTNCTEELENAGVEVLKFSQVKEVK 255 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSC-----TTS-----CHHHHHHHHHHHHHTTCEEETTEEEEEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHc--CCeEEEEEeCCccc-----ccc-----CHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 4799999999999999999998 89999999876531 111 12233344455555 9999865 788886
Q ss_pred Cc--c--cEEEecc-------CcEEEecEEEEecCCCCCCC
Q psy1545 81 PR--V--NCVITEK-------QNRIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~--~--~~v~~~~-------g~~i~~d~lviAtG~~p~~~ 110 (454)
.. . ..+.+.+ |..+.+|.+|+|+|.+|...
T Consensus 256 ~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 256 KTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp ECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCT
T ss_pred EcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCC
Confidence 43 2 2355543 25799999999999988765
No 253
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.79 E-value=1.2e-05 Score=79.43 Aligned_cols=36 Identities=22% Similarity=0.123 Sum_probs=32.2
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
|++||+|||||++|+++|..|++. |.+|+|||+.+.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~--G~~V~viE~~~~ 56 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQH--DVDVTVYTDRKP 56 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHT--TCEEEEEESCCG
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC--CCeEEEEcCCCh
Confidence 567999999999999999999998 999999999863
No 254
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.79 E-value=1.7e-05 Score=77.93 Aligned_cols=50 Identities=20% Similarity=0.155 Sum_probs=39.0
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
+.+++.|++|++++.|+++..+++ .+ | ..+|+++++|.||+|+|......
T Consensus 197 ~~~~~~G~~i~~~~~V~~i~~~~~---~v-V-~~~g~~~~ad~Vv~a~~~~~~~~ 246 (421)
T 3nrn_A 197 RIIMENKGKILTRKEVVEINIEEK---KV-Y-TRDNEEYSFDVAISNVGVRETVK 246 (421)
T ss_dssp HHHHTTTCEEESSCCEEEEETTTT---EE-E-ETTCCEEECSEEEECSCHHHHHH
T ss_pred HHHHHCCCEEEcCCeEEEEEEECC---EE-E-EeCCcEEEeCEEEECCCHHHHHH
Confidence 334568999999999999997653 34 4 56778899999999999865443
No 255
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.79 E-value=7e-05 Score=70.89 Aligned_cols=46 Identities=17% Similarity=0.361 Sum_probs=37.6
Q ss_pred ceEEEeCceEEEEEcCCCCccceEEEecCCcEEe-cCEEEEeeccCcCcc
Q psy1545 230 KITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHA-CDIVVSAIGVVPNSN 278 (454)
Q Consensus 230 gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~-~D~vi~a~G~~p~~~ 278 (454)
|++++++++|++++.+++ .+.+.+++|+... +|.||.|+|......
T Consensus 119 g~~i~~~~~v~~i~~~~~---~~~v~~~~g~~~~~a~~vV~a~g~~~~~~ 165 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEE---HWNLLDAEGQNHGPFSHVIIATPAPQAST 165 (336)
T ss_dssp TCCEECSCCEEEEEECSS---CEEEEETTSCEEEEESEEEECSCHHHHGG
T ss_pred cCcEEecCEEEEEEEeCC---EEEEEeCCCcCccccCEEEEcCCHHHHHH
Confidence 899999999999987653 5778888887664 999999999865443
No 256
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.79 E-value=4.5e-05 Score=74.75 Aligned_cols=140 Identities=15% Similarity=0.138 Sum_probs=76.0
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcc---ccccCCcchhhhHHH-----hhccCCCChhhhh-----hhc
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHIS---ATFLDPGAAEFFQDS-----INKTNTAKPETIF-----KRM 200 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~---~~~~d~~~~~~~~~~-----l~~~~~~~~~~~~-----~~~ 200 (454)
.+|+|||||+.|+-+|..|+ |.+|+++++.+... ...+.+.....+... +.+.......... ...
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 58999999999999999986 99999999875321 111222222222111 1100000000000 000
Q ss_pred ccccCCCCCCCCCCc--cccc---cccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCc--EEecCEEEEeecc
Q psy1545 201 RYNTGGEKGPSLGPD--WHTQ---VNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGH--THACDIVVSAIGV 273 (454)
Q Consensus 201 ~~~~~~~~~~~l~~~--~~~~---~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~--~~~~D~vi~a~G~ 273 (454)
.+.+........... +.+. ..+.+.+++.|++++.++.|++++.+++ +..+.+...+|+ ++.+|+||.|+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~v~v~~~~g~~~~~~a~~vV~A~G~ 164 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGT-DSVTTIEDINGNKREIEARFIIDASGY 164 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETT-EEEEEEEETTSCEEEEEEEEEEECCGG
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEEEEEEcCCCCEEEEEcCEEEECCCC
Confidence 000111111000000 0000 0023334556999999999999987653 334566678886 7999999999998
Q ss_pred CcC
Q psy1545 274 VPN 276 (454)
Q Consensus 274 ~p~ 276 (454)
.+.
T Consensus 165 ~s~ 167 (421)
T 3nix_A 165 GRV 167 (421)
T ss_dssp GCH
T ss_pred chh
Confidence 763
No 257
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.79 E-value=1.9e-05 Score=78.42 Aligned_cols=41 Identities=12% Similarity=0.204 Sum_probs=36.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTK 44 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~ 44 (454)
++||||||||++|++||..|++. |++|+|+|+++..++...
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~--G~~V~vlE~~~~~GG~~~ 51 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVD--GKKVLHIDKQDHYGGEAA 51 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCGGGC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCCCCCcccc
Confidence 37999999999999999999998 999999999998876543
No 258
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.79 E-value=5.7e-05 Score=75.63 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=68.6
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++...+. .+ +.+......+.+.+ +++++.+ ++..+.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~l~------~~-----d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 254 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGL--GYEPTVMVRSIVLR------GF-----DQQMAELVAASMEERGIPFLRKTVPLSVE 254 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSCSST------TS-----CHHHHHHHHHHHHHTTCCEEETEEEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCCCCc------cc-----CHHHHHHHHHHHHhCCCEEEeCCEEEEEE
Confidence 4699999999999999999998 89999998753221 11 12333444555666 9999865 788886
Q ss_pred Ccc---cEEEeccCc-----EEEecEEEEecCCCCCCC
Q psy1545 81 PRV---NCVITEKQN-----RIKYKTLCICTGASPRKI 110 (454)
Q Consensus 81 ~~~---~~v~~~~g~-----~i~~d~lviAtG~~p~~~ 110 (454)
... ..|.+.++. ++.+|.+++|+|.+|...
T Consensus 255 ~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 255 KQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp ECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCG
T ss_pred EcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcC
Confidence 532 245555543 799999999999887654
No 259
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.78 E-value=9.5e-05 Score=73.50 Aligned_cols=106 Identities=17% Similarity=0.192 Sum_probs=66.6
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccc---------------ccccc-------------cc-
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTV---------------PVTKL-------------LS- 53 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~---------------~~~~~-------------~~- 53 (454)
.+|+|||||..|+-+|..|++..++.+|+++++.+.+......+ .++.. +.
T Consensus 228 ~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 307 (463)
T 3s5w_A 228 MKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSV 307 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSC
T ss_pred CeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCc
Confidence 47999999999999999999987788999999987541100000 00000 00
Q ss_pred -ccchhhh-----HHHHHhc--CcEEEcc-eEEEEeCccc--EEEec---cCc--EEEecEEEEecCCCCC
Q psy1545 54 -DITVEET-----DANKFEG--LCTVIVD-TVAAIDPRVN--CVITE---KQN--RIKYKTLCICTGASPR 108 (454)
Q Consensus 54 -~~~~~~~-----~~~~~~~--~i~~~~~-~v~~i~~~~~--~v~~~---~g~--~i~~d~lviAtG~~p~ 108 (454)
..+.... +.+.+.. +++++.+ +++.+..+.. .+.+. +|+ ++.+|.||+|||.+|.
T Consensus 308 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 308 VDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp BCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECC
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCC
Confidence 0000000 1112222 8888865 7777765443 45554 565 4999999999999887
No 260
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.76 E-value=2.1e-05 Score=77.29 Aligned_cols=39 Identities=23% Similarity=0.258 Sum_probs=35.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCC-CeEEEECCCCccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPG-ESIGLVTPSGIVKAV 42 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g-~~v~lie~~~~~~~~ 42 (454)
++||+|||||++|++||..|++. | .+|+|+|+++..++.
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~--g~~~v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQA--GFHDYTILERTDHVGGK 45 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSSCSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--CCCcEEEEECCCCCCCc
Confidence 47999999999999999999998 7 899999998877653
No 261
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.75 E-value=7.1e-05 Score=70.09 Aligned_cols=117 Identities=13% Similarity=0.055 Sum_probs=65.6
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCC
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLG 213 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 213 (454)
..++|||+|+.|+.+|..++ |.+|+++++...--.. .... +.. ...+.....+...+.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~-~~G~--------~~~-----------~~~i~~~~g~~~~i~ 64 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVA-AGGQ--------LTT-----------TTIIENFPGFPNGID 64 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCC-TTCG--------GGG-----------SSEECCSTTCTTCEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcc-cCCC--------cCC-----------hHHhhhccCCcccCC
Confidence 46999999999999998875 9999999875421000 0000 000 000000000000000
Q ss_pred -CccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 214 -PDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 214 -~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
+++... +.+..++.++++..+ .+.......+ ...+...++.++.+|.+|+|||.+|...
T Consensus 65 ~~~l~~~--~~~~~~~~~~~~~~~-~v~~~~~~~~---~~~~~~~~~~~~~~~~liiATG~~~~~~ 124 (314)
T 4a5l_A 65 GNELMMN--MRTQSEKYGTTIITE-TIDHVDFSTQ---PFKLFTEEGKEVLTKSVIIATGATAKRM 124 (314)
T ss_dssp HHHHHHH--HHHHHHHTTCEEECC-CEEEEECSSS---SEEEEETTCCEEEEEEEEECCCEEECCC
T ss_pred HHHHHHH--HHHHHhhcCcEEEEe-EEEEeecCCC---ceEEEECCCeEEEEeEEEEccccccccc
Confidence 001000 122234577887766 4555554432 4567778888999999999999988754
No 262
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.75 E-value=8.3e-05 Score=74.53 Aligned_cols=96 Identities=15% Similarity=0.118 Sum_probs=68.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.+. .+ +.++.....+.+.+ +++++.+ .+..+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~--g~~Vtlv~~~~~l~------~~-----d~~~~~~l~~~l~~~gv~~~~~~~v~~i~ 252 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGI--GLDTTVMMRSIPLR------GF-----DQQMSSLVTEHMESHGTQFLKGCVPSHIK 252 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCSST------TS-----CHHHHHHHHHHHHHTTCEEEETEEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCceEEEEcCcccc------cC-----CHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 4699999999999999999998 89999998864321 11 12233444555666 9999865 777775
Q ss_pred Cc---ccEEEecc---Cc--EEEecEEEEecCCCCCCCC
Q psy1545 81 PR---VNCVITEK---QN--RIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~---~~~v~~~~---g~--~i~~d~lviAtG~~p~~~~ 111 (454)
.. ...+.+.+ |+ ++.+|.+++|+|.+|....
T Consensus 253 ~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 253 KLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRT 291 (488)
T ss_dssp ECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGG
T ss_pred EcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCc
Confidence 42 22454443 44 4789999999998877643
No 263
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.75 E-value=0.00013 Score=71.05 Aligned_cols=139 Identities=15% Similarity=0.199 Sum_probs=75.5
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccc----c--CCcc-hhhhHH-----HhhccCCCChhhhhhh-
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATF----L--DPGA-AEFFQD-----SINKTNTAKPETIFKR- 199 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~----~--d~~~-~~~~~~-----~l~~~~~~~~~~~~~~- 199 (454)
..+|+|||||+.|+.+|..|+ |.+|+++++.+....+. + .+.. .+.+.. .+..............
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 468999999999999999996 99999999987543211 1 1111 111111 0100000000000000
Q ss_pred cccccCC--CC-CCCCCCccccc-c--ccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeecc
Q psy1545 200 MRYNTGG--EK-GPSLGPDWHTQ-V--NLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGV 273 (454)
Q Consensus 200 ~~~~~~~--~~-~~~l~~~~~~~-~--~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~ 273 (454)
-...... +. .....+.+.+. + .+.+.+. +++++++++|++++.+++ .+.+++++|+++.+|+||.|.|.
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~---~v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLE--NDTVIWDRKLVMLEPGKK---KWTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSC--TTSEEESCCEEEEEECSS---SEEEEETTSCCEEESEEEECSCT
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcC--CCEEEECCEEEEEEECCC---EEEEEECCCcEEecCEEEECCCc
Confidence 0000000 00 00000111110 0 0122222 367899999999987653 46788899988999999999999
Q ss_pred CcCcc
Q psy1545 274 VPNSN 278 (454)
Q Consensus 274 ~p~~~ 278 (454)
.....
T Consensus 181 ~S~vR 185 (398)
T 2xdo_A 181 MSKVR 185 (398)
T ss_dssp TCSCC
T ss_pred chhHH
Confidence 87654
No 264
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.74 E-value=2.4e-05 Score=78.13 Aligned_cols=40 Identities=23% Similarity=0.341 Sum_probs=35.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKA 41 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~ 41 (454)
++||+|||||++|+++|+.|++.+++.+|+|+|+++..++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 5899999999999999999999944499999999877654
No 265
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.73 E-value=2.3e-05 Score=79.15 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=35.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCC-CeEEEECCCCcccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPG-ESIGLVTPSGIVKAVT 43 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g-~~v~lie~~~~~~~~~ 43 (454)
++||+|||||++||+||..|++. | .+|+|+|+++.+++..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~--G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQN--GIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHT--TCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhc--CCCCEEEEeCCCCCCCce
Confidence 47999999999999999999998 7 8999999998877643
No 266
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.69 E-value=3.4e-05 Score=74.76 Aligned_cols=40 Identities=33% Similarity=0.488 Sum_probs=35.7
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVT 43 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~ 43 (454)
++|++|||||++|+++|..|++. |.+|+|+|+.+..++..
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~--g~~v~v~E~~~~~GG~~ 68 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASS--GQRVLIVDRRPHIGGNA 68 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSSGGG
T ss_pred CCCEEEECccHHHHHHHHHHHHC--CCceEEEeccCCCCCcc
Confidence 47999999999999999999998 89999999998776543
No 267
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.69 E-value=9.3e-05 Score=75.21 Aligned_cols=128 Identities=13% Similarity=0.128 Sum_probs=69.6
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcccccc---CCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCC
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFL---DPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGP 210 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~---d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (454)
.+++|||+|+.|+.+|..|. |.+|+++++.+.+-..+. .|...-.....+-. ..-... +..... ...
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~-~~f~~~-~~~~~~------~~~ 88 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYC-YSFSEE-VLQEWN------WTE 88 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSS-CCSCHH-HHHHCC------CCB
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccc-cccChh-hhhccC------ccc
Confidence 47999999999999999986 999999998765422110 00000000000000 000000 000000 000
Q ss_pred CC--CCccccccccccCccC--CceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccC
Q psy1545 211 SL--GPDWHTQVNLHGSSRD--TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVV 274 (454)
Q Consensus 211 ~l--~~~~~~~~~~~~~l~~--~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~ 274 (454)
.+ .+++...+ ....++ .+++++++++|.+++.+++ ...+.|.+++|+++.+|.||+|+|..
T Consensus 89 ~~~~~~~i~~yl--~~~~~~~~l~~~i~~~~~V~~~~~~~~-~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 89 RYASQPEILRYI--NFVADKFDLRSGITFHTTVTAAAFDEA-TNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp SSCBHHHHHHHH--HHHHHHTTGGGGEECSCCEEEEEEETT-TTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred ccCCHHHHHHHH--HHHHHHcCCCceEEcCcEEEEEEEcCC-CCeEEEEECCCCEEEeCEEEECcCCC
Confidence 00 01111111 111122 3467889999999886542 23577888899889999999999964
No 268
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.67 E-value=0.00019 Score=73.35 Aligned_cols=68 Identities=12% Similarity=0.153 Sum_probs=44.9
Q ss_pred EecCCCCCC-CCCC----CceeeeeccchHHHHHHHhh----cCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc
Q psy1545 101 ICTGASPRK-IWYS----PHVITIRDTDSVAVLQEKLK----SAKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHI 168 (454)
Q Consensus 101 iAtG~~p~~-~~~~----~~~~~~~~~~~~~~l~~~~~----~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~ 168 (454)
.|+.+.... +++| .+...+....+...+...+. ..-.|+|||+|..|+.+|..++ |.+|+++++.+.+
T Consensus 78 ~c~~ch~~~~~~~p~~~~~~~~~w~~~~~~~~i~~~i~~~~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~ 156 (566)
T 1qo8_A 78 YCNECHSFDIKPMPFSDAKKKKSWDDGWDQDKIQKAIAAGPSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFS 156 (566)
T ss_dssp GGGGTCCCCCCCCTTTTSCCCCCSCCCCCHHHHHHHHHTCCSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred hhhhhcCCCcCCCCCCCCCCCcccccccccHHHHHhhccCCCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 466665444 4444 23444444444444433333 2347999999999999999886 9999999987754
No 269
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.66 E-value=4.1e-05 Score=74.65 Aligned_cols=41 Identities=15% Similarity=0.301 Sum_probs=35.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVT 43 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~ 43 (454)
++||+|||||++|++||..|++. +|.+|+|+|+++..++..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~-~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQ-LDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHH-SCCCEEEECSSSSSSGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHh-CCCCEEEEeCCCCCCCee
Confidence 47999999999999999999986 378999999998776543
No 270
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.66 E-value=0.00015 Score=72.24 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=66.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhcCcEEEcc-eEEEEeC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEGLCTVIVD-TVAAIDP 81 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~v~~i~~ 81 (454)
.+++|||||+.|+.+|..|++. +.+|+++++.+.... . ..+.+......+.+ .++++.+ ++..++.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~--------~-~~d~~~~~~l~~~l--~v~i~~~~~v~~i~~ 239 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLM--GVQTHIIEMLDRALI--------T-LEDQDIVNTLLSIL--KLNIKFNSPVTEVKK 239 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSCT--------T-SCCHHHHHHHHHHH--CCCEECSCCEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCEEEEEEeCCcCCC--------C-CCCHHHHHHHHhcC--EEEEEECCEEEEEEE
Confidence 4699999999999999999998 899999999775311 0 00111222222222 3787754 7888776
Q ss_pred cc---cEEEec--cCc--EEEecEEEEecCCCCCCC
Q psy1545 82 RV---NCVITE--KQN--RIKYKTLCICTGASPRKI 110 (454)
Q Consensus 82 ~~---~~v~~~--~g~--~i~~d~lviAtG~~p~~~ 110 (454)
.. ..+.+. +|+ ++.+|.+++|+|.+|...
T Consensus 240 ~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 240 IKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp EETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC
T ss_pred cCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc
Confidence 33 345555 565 799999999999988765
No 271
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.66 E-value=3.2e-05 Score=74.32 Aligned_cols=36 Identities=22% Similarity=0.270 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++||+|||||++|+++|++|++. |.+|+|+|+....
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~--G~~V~vle~~~~~ 41 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK--GYSVHILARDLPE 41 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCEEEEEeccCCC
Confidence 47999999999999999999998 8999999997644
No 272
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.65 E-value=0.00017 Score=68.58 Aligned_cols=42 Identities=19% Similarity=0.262 Sum_probs=36.0
Q ss_pred CceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeecc
Q psy1545 229 TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGV 273 (454)
Q Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~ 273 (454)
.|+++++++.|++++.+++ .+.|.+++|+++.+|.||+|++.
T Consensus 122 ~g~~i~~~~~V~~i~~~~~---~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 122 SGAEVYFRHRVTQINLRDD---KWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HTCEEESSCCEEEEEECSS---SEEEEESSSCCEEESEEEECSCH
T ss_pred cCCEEEeCCEEEEEEEcCC---EEEEEECCCCEEEcCEEEECCCH
Confidence 4899999999999987653 47788888877899999999874
No 273
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.64 E-value=7.3e-05 Score=72.82 Aligned_cols=140 Identities=16% Similarity=0.210 Sum_probs=75.3
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccc------cCCcchhhhHHHhh--------cc---CCCChhhh
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATF------LDPGAAEFFQDSIN--------KT---NTAKPETI 196 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~------~d~~~~~~~~~~l~--------~~---~~~~~~~~ 196 (454)
-+|+|||||+.|+-+|..|+ |.+|++++|.+.+.... +.+...+.+.+... +. ........
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 37999999999999999997 99999999877654310 11211222211100 00 00000000
Q ss_pred hhhcccccCC-CCCC----CCCCccc--cccccccCc-cCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEE
Q psy1545 197 FKRMRYNTGG-EKGP----SLGPDWH--TQVNLHGSS-RDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVV 268 (454)
Q Consensus 197 ~~~~~~~~~~-~~~~----~l~~~~~--~~~~~~~~l-~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi 268 (454)
....+..... .... ....... .+..+.+.| +..+..+++++++++++..++ ..+++.++||+++++|+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~--~~v~v~~~dG~~~~adlvV 159 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIEN--GGIKIFFADGSHENVDVLV 159 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTT--SCEEEEETTSCEEEESEEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCC--CeEEEEECCCCEEEeeEEE
Confidence 0000000000 0000 0000000 001112222 334557899999999986553 3578999999999999999
Q ss_pred EeeccCcCc
Q psy1545 269 SAIGVVPNS 277 (454)
Q Consensus 269 ~a~G~~p~~ 277 (454)
-|-|.+...
T Consensus 160 gADG~~S~v 168 (412)
T 4hb9_A 160 GADGSNSKV 168 (412)
T ss_dssp ECCCTTCHH
T ss_pred ECCCCCcch
Confidence 999987654
No 274
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.64 E-value=3.9e-05 Score=74.28 Aligned_cols=37 Identities=27% Similarity=0.347 Sum_probs=33.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
+||+|||||++|+++|..|++..||.+|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999998678999999998765
No 275
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.63 E-value=0.00018 Score=67.25 Aligned_cols=90 Identities=14% Similarity=0.109 Sum_probs=65.6
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEc-ceEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIV-DTVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~-~~v~~i~ 80 (454)
.+++|||+|+.|+.+|..|++. +.+|+++++.+.+.. .... ..+.+.+ +++++. .++..++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~--g~~v~~~~~~~~~~~------------~~~~---~~~~~~~~gv~~~~~~~v~~i~ 210 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANI--CSKIYLIHRRDEFRA------------APST---VEKVKKNEKIELITSASVDEVY 210 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTT--SSEEEEECSSSSCBS------------CHHH---HHHHHHCTTEEEECSCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhh--CCEEEEEEeCCCCCC------------CHHH---HHHHHhcCCeEEEeCcEEEEEE
Confidence 4699999999999999999998 889999998875411 0011 1122234 999984 5888887
Q ss_pred Cccc---EEEec--cCc--EEEecEEEEecCCCCCC
Q psy1545 81 PRVN---CVITE--KQN--RIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~~~~---~v~~~--~g~--~i~~d~lviAtG~~p~~ 109 (454)
.+.. .+.+. +|+ ++.+|.+|+|+|.+|..
T Consensus 211 ~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~ 246 (315)
T 3r9u_A 211 GDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRN 246 (315)
T ss_dssp EETTEEEEEEEECTTSCEEEECCSCEEECSCEEECC
T ss_pred cCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCc
Confidence 6551 24443 675 79999999999987754
No 276
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.62 E-value=4.8e-05 Score=73.09 Aligned_cols=38 Identities=26% Similarity=0.401 Sum_probs=34.3
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCC-Ccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPS-GIVKA 41 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~-~~~~~ 41 (454)
.+||+|||||++|++||+.|++. |.+|+|+|++ +..++
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~--G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRA--GHDVTILEANANRVGG 82 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHT--SCEEEEECSCSSCCBT
T ss_pred CceEEEECCCHHHHHHHHHHHHC--CCcEEEEeccccccCC
Confidence 36899999999999999999998 8999999998 66654
No 277
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.62 E-value=4.2e-05 Score=75.86 Aligned_cols=39 Identities=21% Similarity=0.325 Sum_probs=35.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
++||+|||||++|++||..|++. |.+|+|+|+++..++.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKA--GLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCcEEEEECCCCCCCc
Confidence 47999999999999999999998 8999999998877654
No 278
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.62 E-value=5.2e-05 Score=73.03 Aligned_cols=39 Identities=21% Similarity=0.509 Sum_probs=34.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
++|++|||||++|+++|..|++. |.+|+|+|+++..++.
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~--g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL--NKKVLVIEKRNHIGGN 39 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG--TCCEEEECSSSSSSGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--CCcEEEEecCCCCCcc
Confidence 37999999999999999999998 8999999998876543
No 279
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.62 E-value=0.0002 Score=67.05 Aligned_cols=110 Identities=16% Similarity=0.113 Sum_probs=62.0
Q ss_pred eEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCCCCC
Q psy1545 137 KIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPSLGP 214 (454)
Q Consensus 137 ~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 214 (454)
.++|||+|+.|+.+|..++ |.+|+++++... -.......... ....+....++
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~-gG~~~~~~~i~------------------------~~p~~~~~~~~ 62 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIP-GGQMANTEEVE------------------------NFPGFEMITGP 62 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-TGGGGGCSCBC------------------------CSTTCSSBCHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCeeecccccC------------------------CcCCccccchH
Confidence 6899999999999998886 999999987531 10000000000 00000000000
Q ss_pred ccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 215 DWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 215 ~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
++... ......+.++.+..+..+....... ......+++++.+|.+|+|||.+|...
T Consensus 63 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 63 DLSTK--MFEHAKKFGAVYQYGDIKSVEDKGE-----YKVINFGNKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp HHHHH--HHHHHHHTTCEEEECCCCEEEECSS-----CEEEECSSCEEEEEEEEECCCEEECCC
T ss_pred HHHHH--HHHHHhhccccccceeeeeeeeeec-----ceeeccCCeEEEeceeEEcccCccCcC
Confidence 00000 0111233566666666655555443 245566778999999999999988764
No 280
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.61 E-value=4.7e-05 Score=76.34 Aligned_cols=39 Identities=18% Similarity=0.282 Sum_probs=35.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
++||+|||||++|++||+.|++. |.+|+|+|+++..++.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKA--GYKVTVLEARTRPGGR 49 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCCEEEEeccCCCCCc
Confidence 47999999999999999999998 8999999999877653
No 281
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.61 E-value=4.6e-05 Score=73.84 Aligned_cols=41 Identities=20% Similarity=0.302 Sum_probs=36.0
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccccc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVT 43 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~ 43 (454)
+++||+|||||++|+++|..|++. |.+|+|+|+++..++..
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~--g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEK--GHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSSSGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC--CCcEEEEEecCCcCCcc
Confidence 157999999999999999999998 89999999998776543
No 282
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.61 E-value=0.00015 Score=75.96 Aligned_cols=96 Identities=17% Similarity=0.153 Sum_probs=69.6
Q ss_pred ccEEEEC--CCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEE
Q psy1545 3 FTYLIIG--GGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAA 78 (454)
Q Consensus 3 ~dvvIIG--gG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~ 78 (454)
.+++||| ||..|+.+|..|++. +.+|+++++.+..... ...........+.+.+ +++++.+ +++.
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~--g~~Vtlv~~~~~l~~~---------~~~~~~~~~l~~~l~~~GV~i~~~~~V~~ 592 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQK--GYEVSIVTPGAQVSSW---------TNNTFEVNRIQRRLIENGVARVTDHAVVA 592 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHT--TCEEEEEESSSSTTGG---------GGGGTCHHHHHHHHHHTTCEEEESEEEEE
T ss_pred CEEEEEcCCCCccHHHHHHHHHhC--CCeeEEEecccccccc---------cccchhHHHHHHHHHHCCCEEEcCcEEEE
Confidence 3599999 999999999999998 8899999987654211 0001122333445555 9999865 8999
Q ss_pred EeCcccEEEe---ccCcEEEecEEEEecCCCCCC
Q psy1545 79 IDPRVNCVIT---EKQNRIKYKTLCICTGASPRK 109 (454)
Q Consensus 79 i~~~~~~v~~---~~g~~i~~d~lviAtG~~p~~ 109 (454)
++.+...+.. .+++++.+|.+|+|+|.+|..
T Consensus 593 i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 593 VGAGGVTVRDTYASIERELECDAVVMVTARLPRE 626 (690)
T ss_dssp EETTEEEEEETTTCCEEEEECSEEEEESCEEECC
T ss_pred EECCeEEEEEccCCeEEEEECCEEEECCCCCCCh
Confidence 9877655543 244579999999999987753
No 283
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.60 E-value=0.0001 Score=75.15 Aligned_cols=137 Identities=16% Similarity=0.126 Sum_probs=75.4
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhcc--------CCCChhhh-hhhc---c
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKT--------NTAKPETI-FKRM---R 201 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~--------~~~~~~~~-~~~~---~ 201 (454)
..|+|||+|+.|+-+|..|+ |.+|+++++.+......-...+.....+.+.+. ........ .... .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 47999999999999999997 999999998765432111111111112222110 00000000 0000 0
Q ss_pred cccCCCCCCC--CCCccccc---cccccCccCCceEEEeCceEEEEEcCCCCccceEEEe--cCC-cEEecCEEEEeecc
Q psy1545 202 YNTGGEKGPS--LGPDWHTQ---VNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL--TNG-HTHACDIVVSAIGV 273 (454)
Q Consensus 202 ~~~~~~~~~~--l~~~~~~~---~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~--~~g-~~~~~D~vi~a~G~ 273 (454)
+... ..... ..-.+.+. ..+.+.+++.|++++++++|++++.+++ .+.+.+ .+| +++.+|+||.|.|.
T Consensus 130 ~~~~-~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~---~v~v~~~~~~G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 130 LDFG-LVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAE---AVEVTVAGPSGPYPVRARYGVGCDGG 205 (570)
T ss_dssp CBGG-GSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSS---CEEEEEEETTEEEEEEESEEEECSCS
T ss_pred cccc-ccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC---eEEEEEEeCCCcEEEEeCEEEEcCCC
Confidence 0000 00000 00000100 0123334556999999999999987664 455666 677 78999999999998
Q ss_pred CcC
Q psy1545 274 VPN 276 (454)
Q Consensus 274 ~p~ 276 (454)
...
T Consensus 206 ~S~ 208 (570)
T 3fmw_A 206 RST 208 (570)
T ss_dssp SCH
T ss_pred Cch
Confidence 763
No 284
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.59 E-value=0.00019 Score=70.03 Aligned_cols=133 Identities=18% Similarity=0.192 Sum_probs=75.9
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcccc----ccCCcchhhhHH-----HhhccCCCChhhhhhhcccc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISAT----FLDPGAAEFFQD-----SINKTNTAKPETIFKRMRYN 203 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~----~~d~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~~ 203 (454)
..+|+|||||+.|+-+|..|+ |.+|+++++.+.+... .+.+...+.+.+ .+.+.... .....+.
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~-----~~~~~~~ 97 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGP-----LRRMAYR 97 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCC-----CCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCC-----CcceEEE
Confidence 568999999999999999997 9999999998754321 111111111111 01000000 0000000
Q ss_pred cCCCCCC---------------CCCCccccc-c--ccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecC
Q psy1545 204 TGGEKGP---------------SLGPDWHTQ-V--NLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACD 265 (454)
Q Consensus 204 ~~~~~~~---------------~l~~~~~~~-~--~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D 265 (454)
... .+. ...-.+... + .+.+.+.+ ++++++++|++++.+++ .+.+.+++|+++.+|
T Consensus 98 ~~~-~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~---~v~v~~~~g~~~~a~ 171 (407)
T 3rp8_A 98 DFR-SGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDAD---GVTVWFTDGSSASGD 171 (407)
T ss_dssp ETT-TCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETT---EEEEEETTSCEEEES
T ss_pred ECC-CCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCC---cEEEEEcCCCEEeeC
Confidence 000 000 000000000 0 01222233 88999999999987653 577889999999999
Q ss_pred EEEEeeccCcCcc
Q psy1545 266 IVVSAIGVVPNSN 278 (454)
Q Consensus 266 ~vi~a~G~~p~~~ 278 (454)
+||.|.|......
T Consensus 172 ~vV~AdG~~S~vr 184 (407)
T 3rp8_A 172 LLIAADGSHSALR 184 (407)
T ss_dssp EEEECCCTTCSSH
T ss_pred EEEECCCcChHHH
Confidence 9999999987654
No 285
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.58 E-value=0.00014 Score=70.26 Aligned_cols=50 Identities=18% Similarity=0.148 Sum_probs=39.7
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcC
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPN 276 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~ 276 (454)
.+.+++.|++++.++.|+++..+++ .+.+.+++| ++.+|.||+|+|....
T Consensus 171 ~~~~~~~g~~i~~~~~v~~i~~~~~---~~~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 171 VKAAKMLGAEIFEHTPVLHVERDGE---ALFIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HHHHHHTTCEEETTCCCCEEECSSS---SEEEEETTE-EEEEEEEEECCGGGTH
T ss_pred HHHHHHCCCEEEcCCcEEEEEEECC---EEEEEcCCc-eEEcCEEEECCChhHH
Confidence 3445668999999999999987653 346777777 7999999999998654
No 286
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.57 E-value=0.00025 Score=71.96 Aligned_cols=53 Identities=15% Similarity=0.169 Sum_probs=39.8
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCC-ccceEEEecCC---cEEecCEEEEeeccCc
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDD-TCNAYVKLTNG---HTHACDIVVSAIGVVP 275 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~-~~~~~v~~~~g---~~~~~D~vi~a~G~~p 275 (454)
.+.+++.|+++++++++++++.++++ ...+.+.+.++ .++.+|+||.|.|...
T Consensus 127 ~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 127 LAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 34445679999999999999875420 01466777776 7899999999999865
No 287
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.56 E-value=5.6e-05 Score=75.47 Aligned_cols=39 Identities=23% Similarity=0.409 Sum_probs=35.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
++||+|||||++|++||..|++. |.+|+|+|+++..++.
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~--g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSR--GTDAVLLESSARLGGA 54 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTT--TCCEEEECSSSSSBTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCCEEEEEcCCCCCce
Confidence 47999999999999999999998 8999999999877654
No 288
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.56 E-value=4.7e-05 Score=72.74 Aligned_cols=38 Identities=16% Similarity=0.123 Sum_probs=33.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcC----CCCeEEEECCCCccc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLH----PGESIGLVTPSGIVK 40 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~----~g~~v~lie~~~~~~ 40 (454)
+||+|||||++|+++|++|++.+ |+.+|+|+|+.....
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~ 42 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPL 42 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCC
Confidence 48999999999999999999984 348999999987543
No 289
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.56 E-value=0.00025 Score=71.54 Aligned_cols=96 Identities=15% Similarity=0.185 Sum_probs=64.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||+.|+.+|..|++. +.+|+++++..... .+ +.++.....+.+.+ +|+++.+ ++..+.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~--G~~Vtlv~~~~~l~------~~-----d~~~~~~~~~~l~~~GV~v~~~~~v~~v~ 277 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGI--GLDVTVMVRSILLR------GF-----DQDMANKIGEHMEEHGIKFIRQFVPIKVE 277 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCSST------TS-----CHHHHHHHHHHHHHTTCEEEESEEEEEEE
T ss_pred CeEEEECCcHHHHHHHHHHHHc--CCeEEEEecccccc------cC-----CHHHHHHHHHHHHHCCCEEEeCCeEEEEE
Confidence 3699999999999999999998 88999998753221 11 12233444455655 9999765 545443
Q ss_pred Cc------ccEEEe--ccC-c--EEEecEEEEecCCCCCCCC
Q psy1545 81 PR------VNCVIT--EKQ-N--RIKYKTLCICTGASPRKIW 111 (454)
Q Consensus 81 ~~------~~~v~~--~~g-~--~i~~d~lviAtG~~p~~~~ 111 (454)
.. ...+.+ .++ + .+.+|.+++|+|.+|....
T Consensus 278 ~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 278 QIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRK 319 (519)
T ss_dssp EEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSS
T ss_pred EccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCC
Confidence 21 122322 344 2 5789999999999887653
No 290
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.53 E-value=0.00027 Score=72.35 Aligned_cols=137 Identities=15% Similarity=0.115 Sum_probs=75.1
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhh--------hc----
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFK--------RM---- 200 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~--------~~---- 200 (454)
..+|+|||||+.|+-+|..|+ |.+|+++++.+..... ....+.......+.... -....... ..
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~-~G~~l~p~~~~~l~~lG-l~~~l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYR-VGESLLPGTMSILNRLG-LQEKIDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCC-CCCBCCHHHHHHHHHTT-CHHHHHHHCCEEECEEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCc-eeeeECHHHHHHHHHcC-CcHHHHhcCCcccCCcEEEecC
Confidence 478999999999999999987 9999999987532211 11111111111111100 00000000 00
Q ss_pred -----ccccCCCCCCCCC-C-c--cccc-c--ccccCccCCceEEEeCceEEEEEcCCCCccceEEEec-CC--cEEecC
Q psy1545 201 -----RYNTGGEKGPSLG-P-D--WHTQ-V--NLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT-NG--HTHACD 265 (454)
Q Consensus 201 -----~~~~~~~~~~~l~-~-~--~~~~-~--~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~-~g--~~~~~D 265 (454)
.+.+......... + . +... + .+.+.+++.|++++.++.|+++..++ +..+.|.+. +| .++.+|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~~~V~~~~~G~~~~i~Ad 178 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD--PDRVVLTVRRGGESVTVESD 178 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS--TTCEEEEEEETTEEEEEEES
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCEEEEEEecCCceEEEEcC
Confidence 0000010000000 0 0 1110 0 12334456899999999999998753 235677776 66 579999
Q ss_pred EEEEeeccCc
Q psy1545 266 IVVSAIGVVP 275 (454)
Q Consensus 266 ~vi~a~G~~p 275 (454)
+||.|+|...
T Consensus 179 lVV~AdG~~S 188 (591)
T 3i3l_A 179 FVIDAGGSGG 188 (591)
T ss_dssp EEEECCGGGC
T ss_pred EEEECCCCcc
Confidence 9999999876
No 291
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.52 E-value=0.00044 Score=68.49 Aligned_cols=139 Identities=13% Similarity=0.084 Sum_probs=73.9
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcccc--ccCCcchhhhHHHhhccCCCChhhhh---hhcccccCCCC
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISAT--FLDPGAAEFFQDSINKTNTAKPETIF---KRMRYNTGGEK 208 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~--~~d~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~ 208 (454)
.+|+|||||+.|+.+|..|+ |.+|+++++.+..... .....+.....+.+.... ....... ....+.....
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~-~~~~~~~~~~~~~~~~~~~~- 84 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPY-PKGEELENKINGIKLYSPDM- 84 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCC-CCGGGEEEEEEEEEEECTTS-
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCC-CchHHHHhhhcceEEECCCC-
Confidence 47999999999999999997 9999999987653211 011111111222221000 0000000 0000000000
Q ss_pred CCCCC-Cc----ccc-cc--ccccCccCCceEEEeCceEEEEEcCCCCccceEEEec---CCc--EEecCEEEEeeccCc
Q psy1545 209 GPSLG-PD----WHT-QV--NLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT---NGH--THACDIVVSAIGVVP 275 (454)
Q Consensus 209 ~~~l~-~~----~~~-~~--~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~---~g~--~~~~D~vi~a~G~~p 275 (454)
...+. +. +.+ .+ .+.+.+++.|++++.++.|+++..+++ ....|.+. +|+ ++.+|.||.|+|..+
T Consensus 85 ~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~--~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 85 QTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDG--YVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp SCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETT--EEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred ceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECC--EEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 00000 00 000 00 022333457999999999999986542 22224443 665 799999999999987
Q ss_pred Ccc
Q psy1545 276 NSN 278 (454)
Q Consensus 276 ~~~ 278 (454)
...
T Consensus 163 ~vr 165 (453)
T 3atr_A 163 SFR 165 (453)
T ss_dssp TTG
T ss_pred hhH
Confidence 643
No 292
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.50 E-value=7.4e-05 Score=74.98 Aligned_cols=49 Identities=22% Similarity=0.359 Sum_probs=39.7
Q ss_pred cCccCCc-eEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 224 GSSRDTK-ITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 224 ~~l~~~g-v~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
+.+++.| +++++++.|++|+..++ .+.|.+++|+++.+|.||+|+|...
T Consensus 263 ~~l~~~g~~~i~~~~~V~~i~~~~~---~v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 263 EEAAGTGRLGYVFGCPVRSVVNERD---AARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHTTTCEEEESSCCEEEEEECSS---SEEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHhhhcCceEEEeCCEEEEEEEcCC---EEEEEECCCCEEEcCEEEECCCHHH
Confidence 3345577 99999999999987553 4778888888899999999999743
No 293
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.50 E-value=7.8e-05 Score=74.98 Aligned_cols=39 Identities=18% Similarity=0.339 Sum_probs=35.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
++||+|||||++|++||..|++. |.+|+|+|+++..++.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIH--GLNVTVFEAEGKAGGK 51 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--SCEEEEECSSSSSCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEEeCCCCCCc
Confidence 37999999999999999999998 8999999999887654
No 294
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.50 E-value=0.00015 Score=70.23 Aligned_cols=137 Identities=14% Similarity=0.126 Sum_probs=74.2
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcccc-ccCCcchhhhHHHhhccCCCChhhh---hhhcccccCCCCC
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISAT-FLDPGAAEFFQDSINKTNTAKPETI---FKRMRYNTGGEKG 209 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~-~~d~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~ 209 (454)
..|+|||||+.|+-+|..|+ |.+|+++++.+.+-.. .........+.+.+.- ..+.... .....+.......
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADI--KADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTC--CCCTTTEEEEESEEEEECTTCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCC--CCChHHhhhhcceEEEEcCCCCE
Confidence 47999999999999999997 9999999998754221 1111122222222210 0000000 0001111000000
Q ss_pred -CCCCC-----c----cccc---cccccCccCCceEEEeCceEEEEEcCCCCccceEEEe---cCCcEEecCEEEEeecc
Q psy1545 210 -PSLGP-----D----WHTQ---VNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL---TNGHTHACDIVVSAIGV 273 (454)
Q Consensus 210 -~~l~~-----~----~~~~---~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~---~~g~~~~~D~vi~a~G~ 273 (454)
..+.. . +... ..+.+.+++.|++++.+++|+++..+++ ....|.+ .++.++++|+||.|+|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~--~v~gv~~~~~~~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 83 PIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENG--KVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp CEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETT--EEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred EEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCC--EEEEEEEEECCeEEEEEcCEEEECCCc
Confidence 00000 0 0000 0123334557999999999999987652 2222555 34568999999999998
Q ss_pred CcC
Q psy1545 274 VPN 276 (454)
Q Consensus 274 ~p~ 276 (454)
...
T Consensus 161 ~s~ 163 (397)
T 3cgv_A 161 ESE 163 (397)
T ss_dssp TCH
T ss_pred chH
Confidence 763
No 295
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.49 E-value=0.0024 Score=63.08 Aligned_cols=52 Identities=15% Similarity=0.434 Sum_probs=41.5
Q ss_pred CceeeeeccchHHHHHHHhh----cCCeEEEEcCchhHHHHHHHhc-CCcEEEEEeC
Q psy1545 114 PHVITIRDTDSVAVLQEKLK----SAKKIVVIGNGGIATELVHELS-NVDIVWVVKD 165 (454)
Q Consensus 114 ~~~~~~~~~~~~~~l~~~~~----~~~~vvVvG~G~~g~e~a~~l~-g~~V~~i~~~ 165 (454)
+.++-+.+.++..++.+.+. +.++++|+|||.+|..+|..|. ..+|++++++
T Consensus 210 D~v~~i~~~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d 266 (461)
T 4g65_A 210 DEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQTYSVKLIERN 266 (461)
T ss_dssp CEEEEEEETTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTTSEEEEEESC
T ss_pred CEEEEEeccchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhhcCceEEEecC
Confidence 45666677777777776653 3579999999999999999987 8889999763
No 296
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.49 E-value=0.00032 Score=70.43 Aligned_cols=138 Identities=16% Similarity=0.110 Sum_probs=76.8
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcccc----ccCCcchhhhHHH-hhccCCCC-hhh-hh-hhccccc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISAT----FLDPGAAEFFQDS-INKTNTAK-PET-IF-KRMRYNT 204 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~----~~d~~~~~~~~~~-l~~~~~~~-~~~-~~-~~~~~~~ 204 (454)
..+|+|||+|+.|+-+|..|+ |.+|+++++.+..... .+.+...+.+... +.+..... ... .. ....+..
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 568999999999999999997 9999999987654321 1112111222111 00000000 000 00 0000000
Q ss_pred CCCCCCCCCC-ccccccc----cccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCc---EEecCEEEEeeccCcC
Q psy1545 205 GGEKGPSLGP-DWHTQVN----LHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGH---THACDIVVSAIGVVPN 276 (454)
Q Consensus 205 ~~~~~~~l~~-~~~~~~~----~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~---~~~~D~vi~a~G~~p~ 276 (454)
. ........ -...+.. +.+.+++.|+++++++++++++.+++ .+.+.+.++. ++.+|+||.|.|....
T Consensus 92 ~-~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~---~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 92 G-VLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGD---HVVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp G-GSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSS---CEEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred c-cCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC---EEEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 0 00000000 0001111 23334557999999999999987653 4667777764 7999999999999764
No 297
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.48 E-value=0.00033 Score=71.64 Aligned_cols=52 Identities=10% Similarity=0.063 Sum_probs=37.6
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCCccceEEEec--CCc--EEecCEEEEeeccCc
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT--NGH--THACDIVVSAIGVVP 275 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~--~g~--~~~~D~vi~a~G~~p 275 (454)
.+.+++.||++++++.|+++..+++ +....+... +|+ ++.+|.||+|+|...
T Consensus 262 ~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 262 YDNAVKRNIDLRMNTRGIEVLKDDK-GTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHTTCEEESSEEEEEEEECTT-SCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHhcCCEEEeCCEeeEeEEcCC-CeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 3445668999999999999986542 223334443 664 689999999998754
No 298
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.47 E-value=9.1e-05 Score=74.12 Aligned_cols=41 Identities=22% Similarity=0.306 Sum_probs=35.7
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCC-CeEEEECCCCccccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPG-ESIGLVTPSGIVKAVTK 44 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g-~~v~lie~~~~~~~~~~ 44 (454)
++|++|||||++|+++|+.|++. | .+|+|+|+++..++...
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~--g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTEL--GYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHT--TCCSEEEEESSSSSSGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHHc--CCCCEEEEeCCCCCCCeee
Confidence 47999999999999999999998 6 79999999987765443
No 299
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.46 E-value=0.00011 Score=75.14 Aligned_cols=39 Identities=33% Similarity=0.520 Sum_probs=34.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
++||+|||||++|+++|+.|+++ |.+|+|+|+++...+.
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~r--G~~V~LlE~~~~~~Gt 70 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAAS--GIKTGLIEMQDFAEGT 70 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSTTCSG
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCCCCCc
Confidence 47999999999999999999998 8999999998765443
No 300
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.46 E-value=5.9e-05 Score=74.77 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=30.7
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHI 168 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~ 168 (454)
.++++|||+|+.|+.+|..|+ |.+|+++++.+.+
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 578999999999999999986 9999999987754
No 301
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.44 E-value=0.00033 Score=71.38 Aligned_cols=140 Identities=15% Similarity=0.170 Sum_probs=74.6
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcccc-ccCCcc----hhhhHHHhhccCCCChhhhhhh--cccccC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISAT-FLDPGA----AEFFQDSINKTNTAKPETIFKR--MRYNTG 205 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~-~~d~~~----~~~~~~~l~~~~~~~~~~~~~~--~~~~~~ 205 (454)
.-.|+|||||..|+++|..++ |.+|.+++++...+.. ...+.. ...+.+.+..... ........ ..+...
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg-~~~~~~d~~gi~f~~l 105 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGG-EMGKAIDQTGIQFKML 105 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTC-SHHHHHHHHEEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhh-HHHHHhhhcccceeec
Confidence 357999999999999999886 9999999987421110 011111 0112222211000 00000000 111100
Q ss_pred C-CCCCCCCC---ccccc---cccccCccC-CceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCc
Q psy1545 206 G-EKGPSLGP---DWHTQ---VNLHGSSRD-TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNS 277 (454)
Q Consensus 206 ~-~~~~~l~~---~~~~~---~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~ 277 (454)
. ..++.... ..... ..+.+.+++ .|++++ ++.|+++..++ +....|.+.+|.++.+|.||+|+|..++.
T Consensus 106 ~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~--g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 106 NTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKN--NQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESS--SBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred ccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecC--CEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 0 00111100 00000 012334455 599995 56899987654 23456888899899999999999987665
Q ss_pred c
Q psy1545 278 N 278 (454)
Q Consensus 278 ~ 278 (454)
.
T Consensus 183 ~ 183 (637)
T 2zxi_A 183 V 183 (637)
T ss_dssp E
T ss_pred c
Confidence 3
No 302
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.43 E-value=0.00043 Score=71.18 Aligned_cols=95 Identities=18% Similarity=0.235 Sum_probs=63.4
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||||..|+-+|..|++. +.+|+++++..... .+ +.+......+.+.+ +|+++.+ .+..+.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~l~------~~-----d~~~~~~~~~~l~~~gv~i~~~~~v~~v~ 353 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASL--GGDVTVMVRSILLR------GF-----DQQMAEKVGDYMENHGVKFAKLCVPDEIK 353 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCSST------TS-----CHHHHHHHHHHHHHTTCEEEETEEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCEEEEEECCcCcC------cC-----CHHHHHHHHHHHHhCCCEEEECCeEEEEE
Confidence 3699999999999999999998 88999999862211 11 11222333445555 9999755 555552
Q ss_pred --------C---cccEEE--eccCcEEE--ecEEEEecCCCCCCC
Q psy1545 81 --------P---RVNCVI--TEKQNRIK--YKTLCICTGASPRKI 110 (454)
Q Consensus 81 --------~---~~~~v~--~~~g~~i~--~d~lviAtG~~p~~~ 110 (454)
. ....+. ..+|+++. +|.+++|+|.+|...
T Consensus 354 ~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 398 (598)
T 2x8g_A 354 QLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLS 398 (598)
T ss_dssp EEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGG
T ss_pred eccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccC
Confidence 1 111232 24666555 999999999987653
No 303
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.42 E-value=0.00012 Score=69.70 Aligned_cols=33 Identities=24% Similarity=0.289 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
+||+|||||+||+.||..|++. |.+|+|+|+.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~--G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL--GVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHC--CCcEEEEeccC
Confidence 6999999999999999999998 99999999876
No 304
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.41 E-value=0.00038 Score=69.85 Aligned_cols=137 Identities=15% Similarity=0.101 Sum_probs=75.9
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhh---hhh-c-----ccc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETI---FKR-M-----RYN 203 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~---~~~-~-----~~~ 203 (454)
..+|+|||+|+.|+-+|..|+ |.+|+++++.+......-...+.....+.+.+.... .... ... . .+.
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~-~~~~~~~~~~~~~~~~~~~~ 89 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGIL-PRFGEVETSTQGHFGGLPID 89 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCG-GGGCSCCBCCEEEETTEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCH-HHHHhccccccccccceecc
Confidence 457999999999999999997 999999998765432100011111112222210000 0000 000 0 000
Q ss_pred cCCCCCCCCCC-ccccccc----cccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCc---EEecCEEEEeeccCc
Q psy1545 204 TGGEKGPSLGP-DWHTQVN----LHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGH---THACDIVVSAIGVVP 275 (454)
Q Consensus 204 ~~~~~~~~l~~-~~~~~~~----~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~---~~~~D~vi~a~G~~p 275 (454)
.. ........ -...+.. +.+.+++.|+++++++++++++.+++ .+++.++++. ++.+|+||.|.|...
T Consensus 90 ~~-~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~---~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 90 FG-VLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA---GVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp GG-GSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT---EEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred cc-cCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC---eEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 00 00000000 0000111 23334557999999999999987653 4667777764 799999999999976
Q ss_pred C
Q psy1545 276 N 276 (454)
Q Consensus 276 ~ 276 (454)
.
T Consensus 166 ~ 166 (500)
T 2qa1_A 166 S 166 (500)
T ss_dssp H
T ss_pred H
Confidence 4
No 305
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.40 E-value=0.00051 Score=65.94 Aligned_cols=49 Identities=12% Similarity=0.274 Sum_probs=39.0
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcC
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPN 276 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~ 276 (454)
+.+++.|++++.+++|++++.+++ .+.+.+++| ++.+|.||+|+|....
T Consensus 157 ~~~~~~G~~i~~~~~V~~i~~~~~---~~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 157 QLAKEAGCAQLFNCPVTAIRHDDD---GVTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHHHHTTCEEECSCCEEEEEECSS---SEEEEESSC-EEEEEEEEECCGGGGG
T ss_pred HHHHHCCCEEEcCCEEEEEEEcCC---EEEEEECCC-eEEcCEEEEcCCccHH
Confidence 444668999999999999987653 366777777 4999999999998643
No 306
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.40 E-value=0.00057 Score=69.88 Aligned_cols=138 Identities=12% Similarity=0.187 Sum_probs=73.6
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcccc-ccCCcch----hhhHHHhhccCCCChhhhhhh--cccccCC
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISAT-FLDPGAA----EFFQDSINKTNTAKPETIFKR--MRYNTGG 206 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~-~~d~~~~----~~~~~~l~~~~~~~~~~~~~~--~~~~~~~ 206 (454)
-.|+|||||..|+++|..++ |.+|.++++....... ...+... ..+.+.+..... ........ ..+....
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg-~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGG-LMAKAIDQAGIQFRILN 107 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTC-SHHHHHHHHEEEEEEES
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhcc-HHHHHhhhcccchhhhh
Confidence 47999999999999999886 9999999986421110 0111110 111222211000 00000000 1111000
Q ss_pred -CCCCCCCC---cccc---ccccccCccC-CceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCc
Q psy1545 207 -EKGPSLGP---DWHT---QVNLHGSSRD-TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNS 277 (454)
Q Consensus 207 -~~~~~l~~---~~~~---~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~ 277 (454)
..++.... .... ...+.+.+++ .|++++ ++.|+.+..++ +....|.+.+|.++.+|.||+|+|..+..
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~--g~V~GV~t~dG~~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVEN--DRVVGAVTQMGLKFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESS--SBEEEEEETTSEEEEEEEEEECCSTTTCC
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecC--CEEEEEEECCCCEEECCEEEEcCCCCccC
Confidence 00111000 0000 0012334455 699995 56899987654 23457888888889999999999997654
No 307
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.39 E-value=0.00063 Score=66.03 Aligned_cols=50 Identities=22% Similarity=0.169 Sum_probs=39.8
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
.+.+++.|++++.++.|+++..++ +..+.+.+++| ++.+|.||+|+|...
T Consensus 181 ~~~~~~~g~~i~~~~~v~~i~~~~--~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 181 ARKANEMGVDIIQNCEVTGFIKDG--EKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHCCCEEEcCCeEEEEEEeC--CEEEEEEeCCc-eEECCEEEECCchhH
Confidence 344566899999999999998764 23456777777 799999999999865
No 308
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.39 E-value=0.0001 Score=75.46 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=33.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++||||||||+||++||..|++. |.+|+|+|+.+..
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~--G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQS--GQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCCC
Confidence 47999999999999999999998 8999999998654
No 309
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.37 E-value=0.00016 Score=71.33 Aligned_cols=39 Identities=10% Similarity=0.197 Sum_probs=35.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
++|++|||+|++|+++|..|++. |.+|+++|+++..++.
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~--g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVN--GKKVLHMDRNPYYGGE 44 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCCcccc
Confidence 47999999999999999999998 8999999999877654
No 310
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.37 E-value=0.0004 Score=70.00 Aligned_cols=54 Identities=15% Similarity=0.151 Sum_probs=38.9
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEecCCc--EEecCEEEEeeccCcCc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGH--THACDIVVSAIGVVPNS 277 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~--~~~~D~vi~a~G~~p~~ 277 (454)
+.+++.|++++.+++|+++..+++....+.+...+|+ ++.+|+||.|+|.....
T Consensus 119 ~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~v 174 (512)
T 3e1t_A 119 RNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRV 174 (512)
T ss_dssp HHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSS
T ss_pred HHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHH
Confidence 3445589999999999999875521012344555674 79999999999997643
No 311
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.36 E-value=0.00052 Score=66.15 Aligned_cols=49 Identities=18% Similarity=0.155 Sum_probs=38.9
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCCccceE-EEecCCcEEecCEEEEeeccCc
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDDTCNAY-VKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~-v~~~~g~~~~~D~vi~a~G~~p 275 (454)
.+.+++.|++++.++.|++++.+++ .+. |.+++| ++.+|.||+|+|...
T Consensus 156 ~~~~~~~Gv~i~~~~~v~~i~~~~~---~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 156 AVKAKEYGAKLLEYTEVKGFLIENN---EIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESSS---BEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHCCCEEECCceEEEEEEECC---EEEEEEECCc-EEECCEEEECcchhH
Confidence 3444668999999999999987653 344 777777 799999999999865
No 312
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.35 E-value=0.00016 Score=74.92 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=33.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++||||||||.||++||+.|++. |.+|+|||+.+..
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~--G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQK--GLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHC--CCcEEEEeccCCC
Confidence 47999999999999999999998 8999999998653
No 313
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.34 E-value=0.00084 Score=68.57 Aligned_cols=139 Identities=14% Similarity=0.233 Sum_probs=73.2
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccccc-cCCcch----hhhHHHhhccCCCChhhhhhh--cccccC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATF-LDPGAA----EFFQDSINKTNTAKPETIFKR--MRYNTG 205 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~-~d~~~~----~~~~~~l~~~~~~~~~~~~~~--~~~~~~ 205 (454)
.-.|+|||||..|+++|..++ |.+|.++++........ ..+... ..+.+.+..... ........ ..+...
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g-~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGG-EMGKAIDATGIQFRML 99 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTC-SHHHHHHHHEEEEEEE
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhccc-HHHHHHHhcCCchhhc
Confidence 458999999999999999986 99999999874211110 111111 111222211000 00000000 111100
Q ss_pred C-CCCCCCC-C--cccc---ccccccCccC-CceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCc
Q psy1545 206 G-EKGPSLG-P--DWHT---QVNLHGSSRD-TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNS 277 (454)
Q Consensus 206 ~-~~~~~l~-~--~~~~---~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~ 277 (454)
. ..++... + ...+ ...+.+.+++ .|++++.+ .|..+..+++ ....|.+.+|.++.+|.||+|+|..++.
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~g--~V~GV~t~~G~~i~Ad~VVLATG~~s~~ 176 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANSG--KFSSVTVRSGRAIQAKAAILACGTFLNG 176 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEETT--EEEEEEETTSCEEEEEEEEECCTTCBTC
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecCC--EEEEEEECCCcEEEeCEEEECcCCCCCc
Confidence 0 0011110 0 0000 0012333444 49999654 8888775442 2344788888899999999999988654
No 314
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.34 E-value=0.00017 Score=71.28 Aligned_cols=51 Identities=20% Similarity=0.141 Sum_probs=39.9
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccC
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVV 274 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~ 274 (454)
.+.+++.|+++++++.|++|..+++ ++...|++.+|++++||.||.++++.
T Consensus 263 ~r~~~~~Gg~i~l~t~V~~I~~d~~-g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 263 SRMCAINGGTFMLNKNVVDFVFDDD-NKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHC--CEESSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHcCCEEEeCCeEEEEEEecC-CeEEEEEECCCcEEECCEEEECCCcc
Confidence 3445678999999999999986222 34577889999899999999999998
No 315
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.34 E-value=0.00045 Score=67.41 Aligned_cols=137 Identities=16% Similarity=0.235 Sum_probs=73.4
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCc-EEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhh-----hhcccccCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVD-IVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIF-----KRMRYNTGG 206 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~-V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~ 206 (454)
..+|+|||||+.|+.+|..|+ |.+ |+++++.+.+.+....-.+.....+.+.+.. -...... ....+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg-~~~~l~~~~~~~~~~~~~~-- 80 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELG-LGPALAATAIPTHELRYID-- 80 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTT-CHHHHHHHSEEECEEEEEC--
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCC-ChHHHHhhCCCcceEEEEc--
Confidence 468999999999999999996 999 9999998754321000001111111111100 0000000 0001100
Q ss_pred CCCCC-----------CC-Ccc-ccc--c--ccccCccC-Cc-eEEEeCceEEEEEcCCCCccceEEEecC---C--cEE
Q psy1545 207 EKGPS-----------LG-PDW-HTQ--V--NLHGSSRD-TK-ITIEYSCEVERIVDSEDDTCNAYVKLTN---G--HTH 262 (454)
Q Consensus 207 ~~~~~-----------l~-~~~-~~~--~--~~~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~~~~v~~~~---g--~~~ 262 (454)
..+.. .. +.+ ..+ + .+.+.+++ .| ++++++++|++++. ++ .+.+.+.+ | .++
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~---~v~v~~~~~~~g~~~~~ 156 (410)
T 3c96_A 81 QSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RD---GRVLIGARDGHGKPQAL 156 (410)
T ss_dssp TTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET---TEEEEEEEETTSCEEEE
T ss_pred CCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC---ccEEEEecCCCCCceEE
Confidence 00000 00 000 000 0 12233333 25 68999999999987 43 35677665 7 579
Q ss_pred ecCEEEEeeccCcCcc
Q psy1545 263 ACDIVVSAIGVVPNSN 278 (454)
Q Consensus 263 ~~D~vi~a~G~~p~~~ 278 (454)
.+|+||.|.|......
T Consensus 157 ~ad~vV~AdG~~S~vR 172 (410)
T 3c96_A 157 GADVLVGADGIHSAVR 172 (410)
T ss_dssp EESEEEECCCTTCHHH
T ss_pred ecCEEEECCCccchhH
Confidence 9999999999987543
No 316
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.33 E-value=0.00016 Score=71.74 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=30.5
Q ss_pred CCeEEEEcCchhHHHHHHHhc--C--CcEEEEEeCCCc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--N--VDIVWVVKDKHI 168 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g--~~V~~i~~~~~~ 168 (454)
+++++|||+|+.|+.+|..|. + .+|+++++.+.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 689999999999999999886 6 899999987754
No 317
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.31 E-value=0.00017 Score=72.35 Aligned_cols=39 Identities=26% Similarity=0.301 Sum_probs=35.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
.+||+|||||++|++||..|++. |.+|+|+|+++..++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~--g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA--GHQVTVLEASERPGGR 71 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH--TCEEEEECSSSSSBTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCCCCc
Confidence 36899999999999999999998 8999999999877653
No 318
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.30 E-value=0.00024 Score=68.38 Aligned_cols=48 Identities=17% Similarity=0.132 Sum_probs=39.2
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
+.+++.|+++++++.|+++..+++ .+.|++++| ++.+|.||+|+|...
T Consensus 162 ~~a~~~Gv~i~~~~~V~~i~~~~~---~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 162 RGIRRNQGQVLCNHEALEIRRVDG---AWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHTTCEEESSCCCCEEEEETT---EEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHCCCEEEcCCEEEEEEEeCC---eEEEEeCCC-EEEcCEEEECCChhH
Confidence 444668999999999999987653 467887777 799999999999854
No 319
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.20 E-value=0.00021 Score=74.10 Aligned_cols=35 Identities=34% Similarity=0.472 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHh---h-cCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLA---F-LHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~---~-~~~g~~v~lie~~~~ 38 (454)
++||||||||+||++||..|+ + . |.+|+|||+.+.
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~--G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLG--GLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTT--TCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhC--CCeEEEEeCcCC
Confidence 479999999999999999999 5 6 889999999864
No 320
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.18 E-value=0.00029 Score=72.95 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhc----CCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFL----HPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~----~~g~~v~lie~~~~ 38 (454)
++||||||||+||++||+.|++. +||.+|+|||+...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 37999999999999999999986 24789999999754
No 321
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.14 E-value=0.00031 Score=71.16 Aligned_cols=36 Identities=28% Similarity=0.359 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVK 40 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~ 40 (454)
++||||||||+||++||..|++ |.+|+|+|+.+..+
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~---G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD---QHQVIVLSKGPVTE 43 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT---TSCEEEECSSCTTC
T ss_pred CCCEEEECccHHHHHHHHHHhc---CCcEEEEECCCCCC
Confidence 3799999999999999999998 67999999987643
No 322
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.09 E-value=0.0014 Score=68.23 Aligned_cols=95 Identities=20% Similarity=0.195 Sum_probs=60.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEE-------------------------------------EECCCCcccccccc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIG-------------------------------------LVTPSGIVKAVTKT 45 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~-------------------------------------lie~~~~~~~~~~~ 45 (454)
.+|+|||||..|+-+|..|++. +.+++ ++++.+..
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~~--G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~------ 566 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQP--GESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASK------ 566 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTCC--SSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSC------
T ss_pred CeEEEECCChhHHHHHHHHHhc--CCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchh------
Confidence 4799999999999999999987 54433 22221100
Q ss_pred ccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEeCcccEEEeccC--cEEEecEEEEecCCCCCC
Q psy1545 46 VPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAIDPRVNCVITEKQ--NRIKYKTLCICTGASPRK 109 (454)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~~~~~~v~~~~g--~~i~~d~lviAtG~~p~~ 109 (454)
++..+. ........+.+.+ +|+++.+ ++..++.+...+. .+| +++.+|.+|+|+|.+|..
T Consensus 567 --l~~~l~-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p~~ 630 (671)
T 1ps9_A 567 --PGQGLG-KTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVV-INGETQVLAVDNVVICAGQEPNR 630 (671)
T ss_dssp --TTTTSC-TTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEE-ETTEEEEECCSEEEECCCEEECC
T ss_pred --hccccc-cccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEe-cCCeEEEEeCCEEEECCCccccH
Confidence 001110 0111122344555 9999865 8888886543333 466 579999999999988753
No 323
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.08 E-value=0.00097 Score=70.14 Aligned_cols=95 Identities=17% Similarity=0.188 Sum_probs=65.8
Q ss_pred ccEEEEC--CCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEE
Q psy1545 3 FTYLIIG--GGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAA 78 (454)
Q Consensus 3 ~dvvIIG--gG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~ 78 (454)
.+|+||| ||..|+-+|..|++. +.+|+++++.+ +.. ...+.. . .....+.+.+ +|+++.+ ++..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~--G~~Vtlv~~~~-l~~---~~~~~~-----~-~~~~~~~l~~~GV~i~~~~~v~~ 596 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATA--GHEVTIVSGVH-LAN---YMHFTL-----E-YPNMMRRLHELHVEELGDHFCSR 596 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHT--TCEEEEEESSC-TTH---HHHHTT-----C-HHHHHHHHHHTTCEEECSEEEEE
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc--CCEEEEEeccc-ccc---cccccc-----c-HHHHHHHHHhCCCEEEcCcEEEE
Confidence 4799999 999999999999998 88999999987 321 000000 0 1223344545 9999866 8888
Q ss_pred EeCcccEEEe--ccC-cE------------------EEecEEEEecCCCCCC
Q psy1545 79 IDPRVNCVIT--EKQ-NR------------------IKYKTLCICTGASPRK 109 (454)
Q Consensus 79 i~~~~~~v~~--~~g-~~------------------i~~d~lviAtG~~p~~ 109 (454)
++.+...+.. .++ +. +.+|.||+|+|.+|..
T Consensus 597 i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 597 IEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp EETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred EECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh
Confidence 8876544432 122 22 8999999999987753
No 324
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.07 E-value=0.00038 Score=70.32 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
.||+||||||+||+.+|.+|++. ++.+|+|||+.+..
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~-~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSED-PDSRVLLIEAGEEP 53 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSBCC
T ss_pred CeeEEEECccHHHHHHHHHHHhC-CCCeEEEEcCCCCC
Confidence 48999999999999999999984 58899999998653
No 325
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.06 E-value=0.0017 Score=66.36 Aligned_cols=53 Identities=19% Similarity=0.141 Sum_probs=37.3
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCCccceEEEec--CCc--EEecCEEEEeeccCcC
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT--NGH--THACDIVVSAIGVVPN 276 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~--~g~--~~~~D~vi~a~G~~p~ 276 (454)
.+.+++.||++++++.++++..+++ +....|... +|+ ++.+|.||+|+|..+.
T Consensus 262 ~~~~~~~gv~i~~~t~v~~l~~~~~-g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 262 WDNAVKRGTDIRLNSRVVRILEDAS-GKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHcCCeEEecCEEEEEEECCC-CeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 3445668999999999999975431 123345444 664 6899999999997654
No 326
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.04 E-value=0.0005 Score=68.46 Aligned_cols=40 Identities=15% Similarity=0.335 Sum_probs=34.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCCcccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSGIVKAVT 43 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~~~~~~~ 43 (454)
++||+|||||++|+++|..|++. +. +|+|+|+++..++..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~--g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEA--GITDLLILEATDHIGGRM 44 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHT--TCCCEEEECSSSSSBTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhc--CCCceEEEeCCCCCCCce
Confidence 47999999999999999999998 87 899999988766543
No 327
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.04 E-value=0.00073 Score=73.27 Aligned_cols=86 Identities=15% Similarity=0.192 Sum_probs=65.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcc-eEEEEe
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVD-TVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-~v~~i~ 80 (454)
.+++|||+|+.|+.+|..|++. +.+|+|+++.+.+.. . .+.+.+ +|+++.+ .+..+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~--G~~Vtvv~~~~~~~~------------~-------~~~l~~~GV~v~~~~~v~~i~ 343 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAAT--GGVVAVIDARSSISA------------A-------AAQAVADGVQVISGSVVVDTE 343 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGG--TCCSEEEESCSSCCH------------H-------HHHHHHTTCCEEETEEEEEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHc--CCcEEEEECCCccch------------h-------HHHHHhCCeEEEeCCEeEEEe
Confidence 4799999999999999999998 888999999875420 0 234445 9999866 788887
Q ss_pred C--ccc--EEEecc-------C--cEEEecEEEEecCCCCCC
Q psy1545 81 P--RVN--CVITEK-------Q--NRIKYKTLCICTGASPRK 109 (454)
Q Consensus 81 ~--~~~--~v~~~~-------g--~~i~~d~lviAtG~~p~~ 109 (454)
. +.+ .|.+.+ | +++.+|.|++|+|.+|+.
T Consensus 344 ~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 344 ADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp ECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECC
T ss_pred ccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcCh
Confidence 5 332 355443 4 579999999999988764
No 328
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.03 E-value=0.002 Score=64.82 Aligned_cols=52 Identities=17% Similarity=0.185 Sum_probs=37.0
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCCccceEEEecC-C--cEEecC-EEEEeeccCc
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTN-G--HTHACD-IVVSAIGVVP 275 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~-g--~~~~~D-~vi~a~G~~p 275 (454)
.+.+++.||++++++.++++..+++ ++...|...+ + .++.+| .||+|+|-..
T Consensus 209 ~~~~~~~Gv~i~~~t~v~~L~~~~~-g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 209 VETAEKLGVRAEYDMRVQTLVTDDT-GRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHTTCEEECSEEEEEEEECTT-CCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHcCCEEEecCEeEEEEECCC-CcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 3444667999999999999987632 3344455543 3 358996 9999998765
No 329
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.01 E-value=0.00051 Score=72.42 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=36.3
Q ss_pred CceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeecc
Q psy1545 229 TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGV 273 (454)
Q Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~ 273 (454)
.|++|++++.|++|+.+++ .+.|.+.+|+++.+|.||+|+..
T Consensus 542 ~gl~I~l~t~V~~I~~~~~---~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGD---EVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSS---SEEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCC---EEEEEECCCcEEEcCEEEECCCH
Confidence 4789999999999997663 47788899989999999999854
No 330
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.00 E-value=0.0034 Score=64.18 Aligned_cols=53 Identities=11% Similarity=0.083 Sum_probs=39.0
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEec------CC---------cEEecCEEEEeeccCcCc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT------NG---------HTHACDIVVSAIGVVPNS 277 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~------~g---------~~~~~D~vi~a~G~~p~~ 277 (454)
+.+++.||++++++.++++..+++ +....|.+. +| .++.+|+||.|.|.....
T Consensus 152 ~~a~~~Gv~i~~g~~v~~l~~~~~-g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 152 EQAEALGVEVYPGYAAAEILFHED-GSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp HHHHHTTCEEETTCCEEEEEECTT-SSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHH
T ss_pred HHHHHcCCEEEcCCEEEEEEEcCC-CCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchH
Confidence 444567999999999999986543 223346665 33 689999999999998753
No 331
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.97 E-value=0.00078 Score=67.49 Aligned_cols=103 Identities=14% Similarity=0.178 Sum_probs=67.5
Q ss_pred CCeEEEEcCchhHHHHHHHhc-CCcEEEEEeCCCccccccC--------CcchhhhHHHhhccCCCChhhhhhhcccccC
Q psy1545 135 AKKIVVIGNGGIATELVHELS-NVDIVWVVKDKHISATFLD--------PGAAEFFQDSINKTNTAKPETIFKRMRYNTG 205 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~-g~~V~~i~~~~~~~~~~~d--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 205 (454)
..+++|||+|+.|+.+|..|+ ..+|+++++.+.+-..... +.....+...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~--------------------- 166 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQYLTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEE--------------------- 166 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHH---------------------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHH---------------------
Confidence 357999999999999999885 3899999987754221100 0000001111
Q ss_pred CCCCCCCCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEe-cCCc--EEecCEEEEeeccCcCcc
Q psy1545 206 GEKGPSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL-TNGH--THACDIVVSAIGVVPNSN 278 (454)
Q Consensus 206 ~~~~~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~-~~g~--~~~~D~vi~a~G~~p~~~ 278 (454)
+.+.+ +.+++++.++.+.++...+. .+.+.. ++++ ++++|.+++|+|..|...
T Consensus 167 ----------------l~~~l-~~~v~~~~~~~v~~i~~~~~---~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 167 ----------------LVGKL-NENTKIYLETSALGVFDKGE---YFLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp ----------------HHHTC-CTTEEEETTEEECCCEECSS---SEEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred ----------------HHHHH-hcCCEEEcCCEEEEEEcCCc---EEEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 11222 47999999999888876552 233332 4553 689999999999988764
No 332
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.96 E-value=0.00058 Score=67.62 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=28.9
Q ss_pred CCeEEEEcCchhHHHHHHHh---c------CCcEEEEEeCCCc
Q psy1545 135 AKKIVVIGNGGIATELVHEL---S------NVDIVWVVKDKHI 168 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l---~------g~~V~~i~~~~~~ 168 (454)
+++++|||+|+.|+.+|..| . +.+|+++++.+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 57899999999999999876 2 6899999987654
No 333
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.95 E-value=0.00064 Score=70.70 Aligned_cols=37 Identities=24% Similarity=0.436 Sum_probs=34.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcccc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKA 41 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~ 41 (454)
+||+|||||++|+++|..|++. |++|+|+|+.+..++
T Consensus 108 ~~v~viG~G~~gl~~a~~l~~~--g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 108 GKVIIIGSGVSGLAAARQLQSF--GMDVTLLEARDRVGG 144 (662)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT--TCEEEEECSSSSSBT
T ss_pred CeEEEECcCHHHHHHHHHHHHC--CCeEEEEecCCCCCC
Confidence 6899999999999999999998 899999999887665
No 334
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.93 E-value=0.0021 Score=65.12 Aligned_cols=52 Identities=12% Similarity=0.071 Sum_probs=40.6
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNS 277 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~ 277 (454)
+.+++.|++++.+ +|+++..+++ +..+.|.+++|+++.+|.||.|+|.....
T Consensus 173 ~~a~~~gv~~~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 173 RWAVERGVNRVVD-EVVDVRLNNR-GYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHCCCEEEEe-eEeEEEEcCC-CcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 3335579999999 8999986543 23457888888889999999999997654
No 335
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.93 E-value=0.0003 Score=76.88 Aligned_cols=100 Identities=17% Similarity=0.173 Sum_probs=61.9
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CC-cEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NV-DIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKGPS 211 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~-~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (454)
+++++|||||+.|+.+|..|+ |. +|+++++.+.+-.. +...+.. + .
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~---------~~~~ip~--------------------~--~ 235 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGL---------STSEIPQ--------------------F--R 235 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTH---------HHHTSCT--------------------T--T
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcc---------ccccCCc--------------------c--c
Confidence 578999999999999999986 88 79999987654321 0000000 0 0
Q ss_pred CCCccccccccccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeecc-CcCc
Q psy1545 212 LGPDWHTQVNLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGV-VPNS 277 (454)
Q Consensus 212 l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~-~p~~ 277 (454)
+..+... ...+.+++.||++++++.+.. . .+.++++.++.+|.||+|||. +|..
T Consensus 236 ~~~~~~~--~~~~~~~~~gv~~~~~~~v~~----~------~v~~~~~~~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 236 LPYDVVN--FEIELMKDLGVKIICGKSLSE----N------EITLNTLKEEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp SCHHHHH--HHHHHHHTTTCEEEESCCBST----T------SBCHHHHHHTTCCEEEECCCCCEECC
T ss_pred CCHHHHH--HHHHHHHHCCcEEEcccEecc----c------eEEhhhcCccCCCEEEEecCCCCCCC
Confidence 0000000 011223558999999977621 1 144455556789999999998 4764
No 336
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.92 E-value=0.00062 Score=69.32 Aligned_cols=35 Identities=26% Similarity=0.528 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
.||+||||||.||+.+|.+|.+. ++.+|+|||+.+
T Consensus 19 ~yDyIIVGgG~AG~vlA~RLse~-~~~~VLlLEaG~ 53 (583)
T 3qvp_A 19 TVDYIIAGGGLTGLTTAARLTEN-PNISVLVIESGS 53 (583)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTS-TTCCEEEECSSC
T ss_pred CccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCC
Confidence 48999999999999999999975 688999999987
No 337
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.90 E-value=0.005 Score=59.54 Aligned_cols=48 Identities=23% Similarity=0.201 Sum_probs=37.7
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
+.+++.|+++++++.|++++.+++ .+.+.+++| ++.+|.||+|+|...
T Consensus 161 ~~a~~~Gv~i~~~~~V~~i~~~~~---~v~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 161 TLAQAAGATLRAGETVTELVPDAD---GVSVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHTTCEEEESCCEEEEEEETT---EEEEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHcCCEEECCCEEEEEEEcCC---eEEEEECCC-EEEcCEEEEcCCcCh
Confidence 444667999999999999987553 356666665 799999999999863
No 338
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.90 E-value=0.00075 Score=71.72 Aligned_cols=38 Identities=24% Similarity=0.407 Sum_probs=34.6
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
++|+|||||++|++||..|++. |++|+|+|+.+..++.
T Consensus 279 ~~v~viG~G~aGl~~A~~l~~~--g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 279 GKVIIIGSGVSGLAAARQLQSF--GMDVTLLEARDRVGGR 316 (852)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCcEEEEEecCcCCCc
Confidence 6899999999999999999998 8999999999877653
No 339
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.89 E-value=0.00073 Score=68.62 Aligned_cols=36 Identities=25% Similarity=0.546 Sum_probs=33.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++|+||||+|++|+.+|.+|.+. +.+|+|+|+.+..
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~~--g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSEA--GKKVLLLERGGPS 42 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCCC
T ss_pred ceeEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCCCC
Confidence 58999999999999999999997 8999999998753
No 340
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.87 E-value=0.00099 Score=64.20 Aligned_cols=136 Identities=14% Similarity=0.157 Sum_probs=72.4
Q ss_pred eEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcccccc-CCcchhhhHHHhhccCCCChhhhhh---hcccccCCC---
Q psy1545 137 KIVVIGNGGIATELVHELS--NVDIVWVVKDKHISATFL-DPGAAEFFQDSINKTNTAKPETIFK---RMRYNTGGE--- 207 (454)
Q Consensus 137 ~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~~~~-d~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~--- 207 (454)
.|+|||||+.|+-+|..|+ |.+|++++|.+.+-.... -..+.....+.+.- ..+...+.. ..++.....
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADI--KADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTC--CCCTTTEEEEESEEEEECTTCSSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCC--CchhhhhhcccceEEEEeCCCceE
Confidence 5899999999999999997 999999999776532111 11122222222211 000001000 111111000
Q ss_pred -------CCCCCCCccccc-c--ccccCccCCceEEEeCceEEEEEcCCCCccceEEEe-cCC--cEEecCEEEEeeccC
Q psy1545 208 -------KGPSLGPDWHTQ-V--NLHGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL-TNG--HTHACDIVVSAIGVV 274 (454)
Q Consensus 208 -------~~~~l~~~~~~~-~--~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~-~~g--~~~~~D~vi~a~G~~ 274 (454)
.....+-.+.+. + .+.+...+.|++++.++.++.+..+++ ....+.. .++ .++.+|+||-|.|..
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~--~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENG--KVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETT--EEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccc--eeeeeeecccccceEEEEeEEEeCCccc
Confidence 000000000000 0 022334567999999999999876553 2333332 233 468999999999987
Q ss_pred cC
Q psy1545 275 PN 276 (454)
Q Consensus 275 p~ 276 (454)
..
T Consensus 162 S~ 163 (397)
T 3oz2_A 162 SE 163 (397)
T ss_dssp CH
T ss_pred cH
Confidence 54
No 341
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.85 E-value=0.00079 Score=68.54 Aligned_cols=36 Identities=31% Similarity=0.471 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
.||+||||||.||+.+|.+|.+. +..+|+|||+.+.
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~-~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAEN-PNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTS-TTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCCC
Confidence 48999999999999999999987 4579999999876
No 342
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.80 E-value=0.0024 Score=64.16 Aligned_cols=52 Identities=12% Similarity=0.032 Sum_probs=40.8
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNS 277 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~ 277 (454)
+.+++.|++++.+ +|+++..+++ +..+.|.+++|+++.+|+||.|+|.....
T Consensus 181 ~~a~~~gv~~~~~-~v~~i~~~~~-~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 181 EYAIARGVRHVVD-DVQHVGQDER-GWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred HHHHHCCCEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 3335579999999 9999987443 33467888888889999999999997654
No 343
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.74 E-value=0.0039 Score=66.60 Aligned_cols=50 Identities=26% Similarity=0.214 Sum_probs=39.1
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
.+.+++.|++++.++.|++++.+++ ....|.+++| ++.+|.||+|+|...
T Consensus 158 ~~~a~~~Gv~i~~~t~V~~i~~~~~--~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 158 IKRTESAGVTYRGSTTVTGIEQSGG--RVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEETT--EEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHcCCEEECCceEEEEEEeCC--EEEEEEECCc-EEECCEEEECCccch
Confidence 3445678999999999999987542 2345777777 799999999999864
No 344
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.72 E-value=0.0027 Score=61.71 Aligned_cols=49 Identities=10% Similarity=0.125 Sum_probs=34.0
Q ss_pred ccCccCCceEEEeCceEE---------EEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 223 HGSSRDTKITIEYSCEVE---------RIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~---------~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
.+.+++.|++++++++|+ ++..+++ .+.|.+++| ++.+|.||+|+|...
T Consensus 179 ~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~---~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 179 AQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNT---HQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHCCCEEEcCCEEEeccccccccceEeeCC---eEEEEECCc-EEECCEEEECCCccH
Confidence 344466899999999999 7765542 235666666 799999999999864
No 345
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.70 E-value=0.0039 Score=62.90 Aligned_cols=50 Identities=8% Similarity=0.062 Sum_probs=38.9
Q ss_pred ccC-CceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCc
Q psy1545 226 SRD-TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNS 277 (454)
Q Consensus 226 l~~-~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~ 277 (454)
+++ .|++++.+ .|++++.+++ +..+.+.+++|.++.+|+||.|+|.....
T Consensus 185 a~~~~Gv~i~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 185 CTQKLGVTHIRD-HVSQIINNQH-GDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHTSCCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred HHhcCCCEEEEe-EEEEEEecCC-CcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 345 79999999 6999986543 23456778887789999999999997654
No 346
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.69 E-value=0.00095 Score=67.53 Aligned_cols=35 Identities=20% Similarity=0.452 Sum_probs=32.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
+||+||||||.||+.+|.+|.+ +.+|+|+|+.+..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse---g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE---KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT---TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc---CCcEEEEecCCCc
Confidence 4899999999999999999999 6799999998764
No 347
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.66 E-value=0.00088 Score=68.05 Aligned_cols=37 Identities=24% Similarity=0.370 Sum_probs=33.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
.||+||||||.||+.+|.+|.+. ++.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~-~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED-PDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS-TTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhC-cCCcEEEEecCCcc
Confidence 58999999999999999999983 58999999998754
No 348
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.65 E-value=0.0064 Score=61.65 Aligned_cols=33 Identities=18% Similarity=0.396 Sum_probs=29.8
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHI 168 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~ 168 (454)
.+|+|||+|+.|+-+|..|+ |.+|+++++.+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 47999999999999999996 9999999988754
No 349
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.60 E-value=0.01 Score=55.48 Aligned_cols=33 Identities=6% Similarity=0.255 Sum_probs=28.7
Q ss_pred CeEEEEcCchhHHHHHHHhc----CCcEEEEEeCCCc
Q psy1545 136 KKIVVIGNGGIATELVHELS----NVDIVWVVKDKHI 168 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~----g~~V~~i~~~~~~ 168 (454)
.+++|||+|+.|+.+|..|+ |.+|+++++.+..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccc
Confidence 38999999999999998884 7899999987654
No 350
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.59 E-value=0.0082 Score=60.11 Aligned_cols=50 Identities=10% Similarity=-0.039 Sum_probs=38.3
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEec---CCc--EEecCEEEEeeccCcC
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT---NGH--THACDIVVSAIGVVPN 276 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~---~g~--~~~~D~vi~a~G~~p~ 276 (454)
+.+++.|++++++++|+++..+++ .+.+.+. +|+ ++.+|.||.|+|....
T Consensus 157 ~~a~~~Gv~i~~~~~V~~l~~~~~---~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 157 QMVVRKGGEVLTRTRATSARRENG---LWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETT---EEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHcCCEEEcCcEEEEEEEeCC---EEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 344668999999999999987542 4556663 564 7999999999998754
No 351
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.58 E-value=0.0017 Score=65.91 Aligned_cols=37 Identities=35% Similarity=0.574 Sum_probs=33.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++|++|||+|++|+.+|.+|.+. ++.+|+|+|+.+..
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~-~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSED-PAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCCCEEEEecCCcC
Confidence 58999999999999999999986 57899999998764
No 352
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.57 E-value=0.011 Score=55.69 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=29.2
Q ss_pred CCeEEEEcCchhHHHHHHHhc----CCcEEEEEeCCCc
Q psy1545 135 AKKIVVIGNGGIATELVHELS----NVDIVWVVKDKHI 168 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~----g~~V~~i~~~~~~ 168 (454)
...++|||+|+.|+.+|..|+ |.+|+++++.+.+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAP 116 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCcc
Confidence 357999999999999998874 7899999987654
No 353
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.50 E-value=0.0014 Score=67.86 Aligned_cols=35 Identities=20% Similarity=0.420 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCC--------CeEEEECCCC-cc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPG--------ESIGLVTPSG-IV 39 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g--------~~v~lie~~~-~~ 39 (454)
++|+|||||++|++||+.|++. + .+|+|+|+++ .+
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~--g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRL--AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HTTSCTTCEEEEEEECCCTTBG
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CcccccCCCceEEEEeccCccc
Confidence 5899999999999999999998 5 8999999998 66
No 354
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.42 E-value=0.022 Score=56.98 Aligned_cols=37 Identities=14% Similarity=0.293 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++|+|||+|..|.-++..|++..++.+|+++-+.+..
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 4699999999999999999987667899999988643
No 355
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.39 E-value=0.019 Score=60.54 Aligned_cols=34 Identities=18% Similarity=0.406 Sum_probs=29.8
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcc
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHIS 169 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~ 169 (454)
.+++|||+|..|+-+|..|. |.+|+++++.+++-
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~g 372 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIG 372 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeccccee
Confidence 58999999999999999886 99999999866543
No 356
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.37 E-value=0.0028 Score=63.68 Aligned_cols=36 Identities=22% Similarity=0.257 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++|++|||+|++|+.+|.+|.+. +.+|+|+|+....
T Consensus 11 ~~d~~iiG~G~~g~~~a~~l~~~--~~~v~~~e~~~~~ 46 (507)
T 1coy_A 11 RVPALVIGSGYGGAVAALRLTQA--GIPTQIVEMGRSW 46 (507)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCCS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCcEEEEECCCCC
Confidence 58999999999999999999996 9999999998643
No 357
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.35 E-value=0.0026 Score=63.77 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=33.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++|++|||+|++|+.+|..|.+. +.+|+|||+.+..
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~--~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEA--GVQTLMLEMGQLW 40 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCCCC
Confidence 58999999999999999999996 8999999998754
No 358
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.31 E-value=0.02 Score=58.54 Aligned_cols=51 Identities=16% Similarity=0.059 Sum_probs=36.0
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEe---cCCc--EEecCEEEEeeccCc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL---TNGH--THACDIVVSAIGVVP 275 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~---~~g~--~~~~D~vi~a~G~~p 275 (454)
+.+++.||++++++.++++..+++ +....+.. .+|+ ++.++.||+|+|-..
T Consensus 151 ~~~~~~gv~i~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 151 QQNLKNHTTIFSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHhCCCEEEeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 334567999999999999986421 22334443 4564 689999999998744
No 359
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.09 E-value=0.01 Score=61.38 Aligned_cols=52 Identities=19% Similarity=0.179 Sum_probs=37.2
Q ss_pred cCccCCce--EEEeCceEEEEEcCCC-CccceEEEec------CC--cEEecCEEEEeeccCc
Q psy1545 224 GSSRDTKI--TIEYSCEVERIVDSED-DTCNAYVKLT------NG--HTHACDIVVSAIGVVP 275 (454)
Q Consensus 224 ~~l~~~gv--~i~~~~~v~~i~~~~~-~~~~~~v~~~------~g--~~~~~D~vi~a~G~~p 275 (454)
+.+++.|+ ++++++++++++.+++ .+..+.+.+. +| +++.+|+||.|.|.+.
T Consensus 149 ~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 149 ERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp HHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred HHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 44455665 9999999999986542 1124566654 45 5799999999999865
No 360
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.09 E-value=0.004 Score=63.64 Aligned_cols=37 Identities=22% Similarity=0.433 Sum_probs=33.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
++|++|||+|++|+.+|.+|.+. ++.+|+|||+....
T Consensus 24 ~~d~iivG~G~~g~~~a~~l~~~-~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 24 TYDYIIAGGGLTGLTVAAKLTEN-PKIKVLVIEKGFYE 60 (587)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTS-TTCCEEEEESSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEecCCcc
Confidence 48999999999999999999993 38999999998754
No 361
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.07 E-value=0.006 Score=62.39 Aligned_cols=40 Identities=15% Similarity=0.225 Sum_probs=36.9
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
|+||++|||+|..|...|..|++. |.+|++||++++.++.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~--g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRS--GQRVLHVDSRSYYGGN 46 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhC--CCEEEEEcCCCcccCc
Confidence 369999999999999999999998 9999999999988753
No 362
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.95 E-value=0.02 Score=56.78 Aligned_cols=51 Identities=20% Similarity=0.057 Sum_probs=35.1
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEec-CCcEEecCEEEEeeccCcCc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLT-NGHTHACDIVVSAIGVVPNS 277 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~-~g~~~~~D~vi~a~G~~p~~ 277 (454)
+.+++.||+++.++.+ ++..+++ ....+... ++.++.+|.||+|+|..+..
T Consensus 127 ~~~~~~gv~i~~~~~v-~l~~~~~--~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 127 KLAREEGIPIIEDRLV-EIRVKDG--KVTGFVTEKRGLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp HHHHHTTCCEECCCEE-EEEEETT--EEEEEEETTTEEECCCSEEEECCCCCGGG
T ss_pred HHHHhCCCEEEECcEE-EEEEeCC--EEEEEEEEeCCCeEEeeeEEECCCCCccc
Confidence 3335679999999999 9865442 23334432 22357899999999998754
No 363
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.94 E-value=0.034 Score=56.94 Aligned_cols=49 Identities=18% Similarity=0.036 Sum_probs=35.2
Q ss_pred cCccCCc-eEEEeCceEEEEEcCCCCccceEEE---ecCCc--EEecCEEEEeeccC
Q psy1545 224 GSSRDTK-ITIEYSCEVERIVDSEDDTCNAYVK---LTNGH--THACDIVVSAIGVV 274 (454)
Q Consensus 224 ~~l~~~g-v~i~~~~~v~~i~~~~~~~~~~~v~---~~~g~--~~~~D~vi~a~G~~ 274 (454)
+.+++.| |+++.++.+.++..++ +....+. +.+|+ .+.++.||+|+|..
T Consensus 142 ~~~~~~gnv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 142 QTSLQFPQIQRFDEHFVLDILVDD--GHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHTTCTTEEEEETEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 3345567 9999999999987654 2233332 25675 68999999999974
No 364
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=95.86 E-value=0.0034 Score=60.47 Aligned_cols=33 Identities=30% Similarity=0.303 Sum_probs=29.0
Q ss_pred CeEEEEcCchhHHHHHHHhc----CCcEEEEEeCCCc
Q psy1545 136 KKIVVIGNGGIATELVHELS----NVDIVWVVKDKHI 168 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~----g~~V~~i~~~~~~ 168 (454)
++|+|||||+.|+.+|..|. |.+|+++++.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 37999999999999999884 8999999987654
No 365
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.20 E-value=0.085 Score=54.08 Aligned_cols=50 Identities=14% Similarity=-0.033 Sum_probs=36.1
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEe---cCCc--EEecCEEEEeeccCc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKL---TNGH--THACDIVVSAIGVVP 275 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~---~~g~--~~~~D~vi~a~G~~p 275 (454)
+.+++.||+++.++.+.++..++ +....+.. .+|+ .+.++.||+|+|-..
T Consensus 163 ~~~~~~gv~i~~~~~v~~Li~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 163 GRSLRYDTSYFVEYFALDLLMEN--GECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHTTSCCEEEETEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHhCCCEEEEceEEEEEEEEC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 33456899999999999987643 23334443 4564 689999999998755
No 366
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.19 E-value=0.017 Score=46.74 Aligned_cols=36 Identities=19% Similarity=0.123 Sum_probs=32.0
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
|+.+++|+|.|..|...|..|.+. |.+|+++|+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHH
Confidence 346799999999999999999998 899999999753
No 367
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.09 E-value=0.015 Score=52.31 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=29.7
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHI 168 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~ 168 (454)
-.|+|||+|+.|+-+|..|+ |.+|+++++++.+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 35999999999999999997 9999999988765
No 368
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=94.86 E-value=0.022 Score=58.93 Aligned_cols=69 Identities=16% Similarity=0.197 Sum_probs=43.6
Q ss_pred ccCcCcccccCCCCceecCCCceEeccccccccCceeecCcccccCCccccchhhccCh----HHHHHHHHHHHhhhcC
Q psy1545 272 GVVPNSNIQVHGTPFELAPDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLW----TQAKHMGTYAAKCMVG 346 (454)
Q Consensus 272 G~~p~~~~~~~~~~l~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~----~~A~~~g~~aa~~i~~ 346 (454)
|..|... .++..+-.....|+|.||...||++|++||+|+|+.......+ +++ ..+.-.|+.|+.+++.
T Consensus 354 GiD~~~~-~ipv~p~~hyt~GGi~vd~~~~v~IpGLYAaGE~a~~g~hGan-----rlggnsL~~~~vfGr~Ag~~aa~ 426 (660)
T 2bs2_A 354 GIDPAEK-WAPVLPMQHYSMGGIRTDYRGEAKLKGLFSAGEAACWDMHGFN-----RLGGNSVSEAVVAGMIVGEYFAE 426 (660)
T ss_dssp CCCTTTS-CEEECCEEEEECCEEECCTTSBCSSBTEEECGGGEECCSSTTC-----CCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccc-ceEeeeeeeeccceEEECCCCceecCCEEeccccccccccCCC-----CCchHHHHHHHHHHHHHHHHHHH
Confidence 5555544 3322222334579999999999999999999998754333322 222 2345557777777654
No 369
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.77 E-value=0.033 Score=45.79 Aligned_cols=35 Identities=11% Similarity=0.270 Sum_probs=31.0
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
.+.+++|+|+|..|...+..|.+. +.+|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~--g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQR--GQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCCEEEEECCC
Confidence 146799999999999999999998 89999999863
No 370
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.76 E-value=0.027 Score=43.63 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=30.6
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCC-CeEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPG-ESIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g-~~v~lie~~~ 37 (454)
|+++++|+|+|..|..++..|.+. | .+|+++++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~--g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTS--SNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHC--SSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCH
Confidence 346899999999999999999998 6 7899998864
No 371
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=94.51 E-value=0.019 Score=57.96 Aligned_cols=58 Identities=19% Similarity=0.157 Sum_probs=39.0
Q ss_pred cCCCceEeccccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCC
Q psy1545 289 APDCGIGVNELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGA 347 (454)
Q Consensus 289 ~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 347 (454)
...|+|.||...||++|++||+|+|+.......+... -.....|.-.|+.|+++++..
T Consensus 352 ~t~GGi~vd~~~~t~I~GLyAaGE~a~~g~hGanrl~-gnsl~~~~vfG~~Ag~~aa~~ 409 (540)
T 1chu_A 352 YTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMA-SNSLLECLVYGWSAAEDITRR 409 (540)
T ss_dssp EESCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCT-THHHHHHHHHHHHHHHHHHHH
T ss_pred eecCcEEECCCCCCccCCEEeccccccccccCCCcCc-chhHHHHHHHHHHHHHHHHHh
Confidence 3479999999999999999999999854333322100 001223566688888887653
No 372
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=94.29 E-value=0.023 Score=58.72 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=29.9
Q ss_pred cccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcC
Q psy1545 298 ELMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVG 346 (454)
Q Consensus 298 ~~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 346 (454)
..++|++|++||||||+...... .+.++..+|++++.+++.
T Consensus 446 ~~~~t~v~gl~a~Ge~~~~~~hg--------~~~~sl~~g~~ag~~a~~ 486 (662)
T 3gyx_A 446 YNRMTTVEGLWTCADGVGASGHK--------FSSGSHAEGRIVGKQMVR 486 (662)
T ss_dssp CTTBCSSBTEECCSSSBCSCCCC--------HHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccCCeEeCccccccccCc--------cHhHHHHHHHHHHHHHHH
Confidence 67889999999999998644222 245667778777776654
No 373
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.27 E-value=0.038 Score=44.60 Aligned_cols=33 Identities=33% Similarity=0.534 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
.+++|+|+|..|...|..|.+. |.+|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCH
Confidence 4799999999999999999998 89999999864
No 374
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.23 E-value=0.024 Score=56.58 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=28.3
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcc
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHIS 169 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~ 169 (454)
|+|+|||+|..|+-+|..|+ |.+|+++++++++-
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCC
Confidence 68999999999999999997 99999999877653
No 375
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.23 E-value=0.045 Score=45.05 Aligned_cols=34 Identities=21% Similarity=0.154 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
.+++|+|+|..|...|..|.+. |.+|+++++++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~~ 53 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNEY 53 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGG
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHH
Confidence 5799999999999999999998 889999998753
No 376
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.23 E-value=0.036 Score=54.54 Aligned_cols=80 Identities=14% Similarity=0.115 Sum_probs=53.6
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcceEEEEeC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVDTVAAIDP 81 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~v~~i~~ 81 (454)
.+|.|||.|.+|+++|..|+++ |++|++.|..+... ....+.+.+ ++++..+.- +
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~--G~~V~~~D~~~~~~------------------~~~~~~L~~~gi~~~~g~~----~ 65 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL--GAIVTVNDGKPFDE------------------NPTAQSLLEEGIKVVCGSH----P 65 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT--TCEEEEEESSCGGG------------------CHHHHHHHHTTCEEEESCC----C
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEEeCCcccC------------------ChHHHHHHhCCCEEEECCC----h
Confidence 5799999999999999999998 99999999865310 011233444 777654321 1
Q ss_pred cccEEEeccCcEEEecEEEEecCCCCCCCCCC
Q psy1545 82 RVNCVITEKQNRIKYKTLCICTGASPRKIWYS 113 (454)
Q Consensus 82 ~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~ 113 (454)
.. + . ++ .+|.+|+++|..+..|.+.
T Consensus 66 ~~--~-~-~~---~~d~vv~spgi~~~~p~~~ 90 (451)
T 3lk7_A 66 LE--L-L-DE---DFCYMIKNPGIPYNNPMVK 90 (451)
T ss_dssp GG--G-G-GS---CEEEEEECTTSCTTSHHHH
T ss_pred HH--h-h-cC---CCCEEEECCcCCCCChhHH
Confidence 10 0 0 11 1799999999877766543
No 377
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.04 E-value=0.05 Score=50.89 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=30.9
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
|+++|.|||+|.-|...|..|++. |.+|+++++++
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~ 35 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSD 35 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCh
Confidence 778999999999999999999997 88999999865
No 378
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.03 E-value=0.054 Score=43.34 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
++++|||+|..|...|..|.+. +.+|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCH
Confidence 5799999999999999999997 88999998854
No 379
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=93.61 E-value=0.16 Score=52.61 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=28.0
Q ss_pred CeEEEEcCchhHHHHHHHh-------cCCcEEEEEeCCCc
Q psy1545 136 KKIVVIGNGGIATELVHEL-------SNVDIVWVVKDKHI 168 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l-------~g~~V~~i~~~~~~ 168 (454)
..|+|||||+.|+-+|..| .|.+|+++++.+..
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 4799999999999999876 37899999987654
No 380
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.54 E-value=0.056 Score=50.33 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=29.8
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
|+++|.|||+|.-|.+.|..|++. |.+|+++++++
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~ 35 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRS--GEDVHFLLRRD 35 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHT--SCCEEEECSTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCc
Confidence 778999999999999999999997 88999998864
No 381
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.02 E-value=0.064 Score=49.46 Aligned_cols=35 Identities=23% Similarity=0.248 Sum_probs=30.6
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
|+++|.|||+|.-|...|..|.+. |.+|+++++++
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~--g~~V~~~~r~~ 35 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQS--LPHTTLIGRHA 35 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHH--CTTCEEEESSC
T ss_pred CCcEEEEECCCHHHHHHHHHHHHC--CCeEEEEEecc
Confidence 778999999999999999999998 78999999874
No 382
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.99 E-value=0.11 Score=45.52 Aligned_cols=33 Identities=27% Similarity=0.530 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
.+|+|||||..|...+..|.+. |.+|+|++++.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~ 64 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTV 64 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCC
Confidence 5799999999999999999998 89999999853
No 383
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.62 E-value=0.077 Score=46.42 Aligned_cols=33 Identities=12% Similarity=0.151 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 4 TYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 4 dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
+|+|+|+|..|...|..|.+. +.+|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~--g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR--KYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT--TCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHH
Confidence 699999999999999999998 899999998653
No 384
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.41 E-value=0.12 Score=50.77 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=32.3
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
|+++|.|||.|..|+..|..|++. |++|+++|+++.
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~ 36 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRN 36 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHH
Confidence 667899999999999999999998 899999998753
No 385
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.38 E-value=0.12 Score=47.86 Aligned_cols=34 Identities=35% Similarity=0.514 Sum_probs=30.3
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
|+++|.|||+|.-|...|..|. . +.+|+++++++
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~--g~~V~~~~r~~ 34 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-L--YHDVTVVTRRQ 34 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHh-c--CCceEEEECCH
Confidence 7789999999999999999999 6 88999998864
No 386
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.33 E-value=0.1 Score=51.86 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=31.9
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISA 170 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~ 170 (454)
+++++|||+|.+|+.+|..|. |.+|+++++++++-.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 578999999999999999986 999999998876544
No 387
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.28 E-value=0.12 Score=41.51 Aligned_cols=33 Identities=27% Similarity=0.288 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
.+++|+|+|..|...+..|.+. |.+|+++++.+
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 4699999999999999999998 78999998864
No 388
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=91.95 E-value=0.12 Score=50.19 Aligned_cols=33 Identities=24% Similarity=0.186 Sum_probs=29.7
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHI 168 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~ 168 (454)
++++|||||..|+-+|..|+ |.+|+++++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 47999999999999999996 9999999987764
No 389
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.95 E-value=0.16 Score=47.11 Aligned_cols=35 Identities=29% Similarity=0.246 Sum_probs=30.1
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~ 37 (454)
|+++|.|||+|..|.+.|..|+.. +. +|+++|..+
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~--g~~~v~L~Di~~ 36 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAK--ELGDIVLLDIVE 36 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCCc
Confidence 667899999999999999999987 54 799999764
No 390
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.78 E-value=0.097 Score=47.45 Aligned_cols=33 Identities=33% Similarity=0.463 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
..|+|||||..|...+..|.+. |.+|+||+++.
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~--Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPT--GCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGG--TCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhC--CCEEEEEcCCC
Confidence 5799999999999999999998 99999998754
No 391
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=91.57 E-value=0.14 Score=49.71 Aligned_cols=52 Identities=19% Similarity=0.186 Sum_probs=39.3
Q ss_pred cCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcCcc
Q psy1545 224 GSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSN 278 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 278 (454)
+.+++.|++|++++.|++|..+++ ....|.++ |+++++|.||+|+|......
T Consensus 204 ~~~~~~G~~i~~~~~V~~i~~~~~--~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 204 TVISANGGKIHTGQEVSKILIENG--KAAGIIAD-DRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETT--EEEEEEET-TEEEECSEEEECSCHHHHHH
T ss_pred HHHHHcCCEEEECCceeEEEEECC--EEEEEEEC-CEEEECCEEEECCCHHHHHH
Confidence 445667999999999999987652 23335554 77899999999998865444
No 392
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=91.54 E-value=0.13 Score=50.27 Aligned_cols=32 Identities=28% Similarity=0.364 Sum_probs=28.9
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDK 166 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~ 166 (454)
.++|+|||||+.|+.+|..|+ |.+|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 468999999999999999997 99999999876
No 393
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.52 E-value=0.42 Score=41.84 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=27.7
Q ss_pred cCCeEEEEcCchhHHHHHHHhc--CCcEEEEEe
Q psy1545 134 SAKKIVVIGNGGIATELVHELS--NVDIVWVVK 164 (454)
Q Consensus 134 ~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~ 164 (454)
.+++++|||||.+|...+..|. |++|+++.+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 3799999999999999999886 999999854
No 394
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.39 E-value=0.19 Score=48.19 Aligned_cols=34 Identities=18% Similarity=0.369 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
.+|+|||+|.+|+.+|..++.. |.+|+++|+.+.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHH
Confidence 4799999999999999999998 889999998864
No 395
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=91.35 E-value=0.16 Score=50.55 Aligned_cols=35 Identities=17% Similarity=0.231 Sum_probs=30.5
Q ss_pred CeEEEEcCchhHHHHHHHhc---CCcEEEEEeCCCccc
Q psy1545 136 KKIVVIGNGGIATELVHELS---NVDIVWVVKDKHISA 170 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~---g~~V~~i~~~~~~~~ 170 (454)
-.|+|||||.+|+-+|..|+ |.+|+++++++++-.
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 36999999999999999884 899999998887654
No 396
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.20 E-value=0.22 Score=46.57 Aligned_cols=34 Identities=18% Similarity=0.068 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCC
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSG 37 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~ 37 (454)
+++|.|||+|..|.+.|..|+.. ++ +|+++|.++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~--g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQK--DLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCH
Confidence 35899999999999999999997 66 899999875
No 397
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.14 E-value=0.2 Score=46.26 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
+++|.|||+|..|...|..|.+. |++|+++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWP 36 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CCeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCH
Confidence 46899999999999999999997 88999998764
No 398
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=91.07 E-value=0.18 Score=48.10 Aligned_cols=36 Identities=17% Similarity=0.309 Sum_probs=31.5
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeC-CCccc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKD-KHISA 170 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~-~~~~~ 170 (454)
+.+|+|||+|.+|+-+|..|. |.+|++++++ +++-.
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 679999999999999999996 9999999988 65543
No 399
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=90.92 E-value=0.17 Score=49.91 Aligned_cols=46 Identities=17% Similarity=0.097 Sum_probs=35.2
Q ss_pred ccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccC
Q psy1545 226 SRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVV 274 (454)
Q Consensus 226 l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~ 274 (454)
+++.|++|++++.|++|+..++ ..+.|.+ ++.++.+|.||+|++..
T Consensus 244 l~~~g~~i~~~~~V~~i~~~~~--~~~~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 244 LTSRGVSVLRGQPVCGLSLQAE--GRWKVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHTTCEEECSCCCCEEEECGG--GCEEEEC-SSCEEEESEEEECSCHH
T ss_pred HHhcCCEEEeCCEEEEEEEcCC--ceEEEEE-CCeEEEcCEEEECCCHH
Confidence 3556899999999999987652 2356665 45579999999998764
No 400
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.91 E-value=0.2 Score=47.49 Aligned_cols=34 Identities=32% Similarity=0.516 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~~ 38 (454)
.+|||+|||.||+.+|..|... |. +|+++|+...
T Consensus 189 ~kVVi~GAGaAG~~iA~ll~~~--Ga~~I~v~D~~Gl 223 (398)
T 2a9f_A 189 VSIVVNGGGSAGLSITRKLLAA--GATKVTVVDKFGI 223 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEEETTEE
T ss_pred cEEEEECCCHHHHHHHHHHHHc--CCCeEEEEECCCc
Confidence 5799999999999999999998 77 9999999753
No 401
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=90.86 E-value=0.17 Score=48.96 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=30.5
Q ss_pred CCeEEEEcCchhHHHHHHHhc--C-CcEEEEEeCCCc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--N-VDIVWVVKDKHI 168 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g-~~V~~i~~~~~~ 168 (454)
..+++|||||..|+-+|..|. | .+|+++++++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 578999999999999999986 8 899999987765
No 402
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=90.82 E-value=0.18 Score=47.52 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=29.1
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCC
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKH 167 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~ 167 (454)
.+|+|||+|..|+-+|..|+ |.+|+++++.+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEG 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 47999999999999999996 999999998753
No 403
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=90.77 E-value=0.14 Score=52.88 Aligned_cols=41 Identities=22% Similarity=0.221 Sum_probs=29.5
Q ss_pred ccccccCceeecCcccccCCccccchhhccChHHHHHHHHHHHhhhcCC
Q psy1545 299 LMQTSISNVYAAGDVCTPSWDLAKQWFQMRLWTQAKHMGTYAAKCMVGA 347 (454)
Q Consensus 299 ~~~t~~~~Iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 347 (454)
..+|++|++||+|+|++... .++...+..+|++|+++++..
T Consensus 426 ~~~t~I~GLyAaGe~a~~~~--------~r~~~~sl~~G~~ag~~aa~~ 466 (643)
T 1jnr_A 426 NRMTTVKGLFAIGDCAGANP--------HKFSSGSFTEGRIAAKAAVRF 466 (643)
T ss_dssp TTBCSSBTEEECGGGBCSCC--------CCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCceeCCEEeeeccccccc--------cccchhHHHHHHHHHHHHHHH
Confidence 34689999999999987531 134456777788888776653
No 404
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.73 E-value=0.24 Score=46.11 Aligned_cols=33 Identities=24% Similarity=0.202 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCC--eEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGE--SIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~--~v~lie~~~ 37 (454)
++|+|||+|..|.+.|..|.+. +. +|+++|+++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~--g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR--GIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCh
Confidence 5899999999999999999987 66 999999864
No 405
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.71 E-value=0.22 Score=47.29 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
.+|+|||+|..|+.+|..++.. |.+|+++|+.+.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~ 218 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPE 218 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGG
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHH
Confidence 4799999999999999999998 889999998753
No 406
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.67 E-value=0.24 Score=45.06 Aligned_cols=35 Identities=26% Similarity=0.101 Sum_probs=30.9
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
|+++|+|.|+|..|...+..|.+. |.+|+.+.+.+
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ--GWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG--TCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC--CCEEEEEEcCh
Confidence 667899999999999999999998 89999998754
No 407
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=90.58 E-value=0.19 Score=48.80 Aligned_cols=32 Identities=13% Similarity=0.323 Sum_probs=29.0
Q ss_pred eEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc
Q psy1545 137 KIVVIGNGGIATELVHELS--NVDIVWVVKDKHI 168 (454)
Q Consensus 137 ~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~ 168 (454)
+|+|||||..|+-+|..|+ |.+|+++++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 6899999999999999986 9999999987654
No 408
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=90.46 E-value=0.18 Score=50.41 Aligned_cols=42 Identities=24% Similarity=0.318 Sum_probs=34.4
Q ss_pred eEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccC
Q psy1545 231 ITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVV 274 (454)
Q Consensus 231 v~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~ 274 (454)
.+|++++.|++|...++ ..+.|.+.+|+++.+|.||++++..
T Consensus 215 ~~i~~~~~V~~I~~~~~--~~v~v~~~~g~~~~ad~VI~t~p~~ 256 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPS--KNVTVNCEDGTVYNADYVIITVPQS 256 (516)
T ss_dssp GGEETTCCEEEEEECTT--SCEEEEETTSCEEEEEEEEECCCHH
T ss_pred CEEEECCEEEEEEEcCC--CeEEEEECCCcEEECCEEEECCCHH
Confidence 56999999999987531 2578888999889999999998653
No 409
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.35 E-value=0.29 Score=45.88 Aligned_cols=33 Identities=18% Similarity=0.065 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~ 37 (454)
++|+|||+|..|.+.|..|++. ++ +|+|+|.++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~--g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCh
Confidence 5799999999999999999997 66 899999875
No 410
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=90.33 E-value=0.29 Score=48.07 Aligned_cols=33 Identities=15% Similarity=0.121 Sum_probs=29.0
Q ss_pred cCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCC
Q psy1545 134 SAKKIVVIGNGGIATELVHELS--NVDIVWVVKDK 166 (454)
Q Consensus 134 ~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~ 166 (454)
.++++.|+|.|.+|+-+|..|. |.+|+..++++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3799999999999999988886 99999998654
No 411
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=90.33 E-value=0.2 Score=49.60 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=30.4
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHI 168 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~ 168 (454)
..+|+|||+|..|+-+|..|. |.+|+++++.+++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 578999999999999999986 8999999987654
No 412
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.28 E-value=0.26 Score=46.21 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCC
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPS 36 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~ 36 (454)
.++|.|||+|.-|...|..|++. |.+|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA--GEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT--TCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCEEEEEECh
Confidence 36899999999999999999998 8899999874
No 413
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=90.21 E-value=0.14 Score=50.26 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=30.8
Q ss_pred CCeEEEEcCchhHHHHHHHhc--C------CcEEEEEeCCCcc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--N------VDIVWVVKDKHIS 169 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g------~~V~~i~~~~~~~ 169 (454)
.++|+|||||.+|+-+|..|. | .+|+++++++++-
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCC
Confidence 468999999999999999997 7 8999999887653
No 414
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=90.19 E-value=0.35 Score=47.65 Aligned_cols=39 Identities=15% Similarity=0.244 Sum_probs=35.5
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
++||+|||+|.+|+++|..|++. |.+|+++|+++..++.
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~--g~~v~~~e~~~~~Gg~ 58 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHY--GKKILVLDRNPYYGGE 58 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeccCCCCCC
Confidence 48999999999999999999998 9999999999877653
No 415
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.98 E-value=0.31 Score=39.87 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=29.0
Q ss_pred cCCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCC
Q psy1545 134 SAKKIVVIGNGGIATELVHELS--NVDIVWVVKDK 166 (454)
Q Consensus 134 ~~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~ 166 (454)
.+++++|+|+|.+|..++..|. |.+|+++.+++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999886 88999998754
No 416
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.96 E-value=0.3 Score=45.81 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=31.0
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
|.++|.|||+|.-|...|..|.+. |++|+++++.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~--G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHEN--GEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCH
Confidence 567899999999999999999998 88999998864
No 417
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.58 E-value=0.36 Score=44.89 Aligned_cols=33 Identities=15% Similarity=0.040 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~ 37 (454)
++|.|||+|..|.+.|..|++. +. +|+++|..+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~--g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD--NLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCc
Confidence 6899999999999999999998 76 899999875
No 418
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=89.54 E-value=0.32 Score=46.06 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
+.+|+|||||..|..+++.++++ |.+++++|+++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~--G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKA--GMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCCC
Confidence 14799999999999999999998 999999998764
No 419
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=89.52 E-value=0.24 Score=48.80 Aligned_cols=43 Identities=12% Similarity=0.006 Sum_probs=34.3
Q ss_pred CceEEEeCceEEEEEcCCCCccceEEEe---cCCcEEecCEEEEeeccC
Q psy1545 229 TKITIEYSCEVERIVDSEDDTCNAYVKL---TNGHTHACDIVVSAIGVV 274 (454)
Q Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~~~~v~~---~~g~~~~~D~vi~a~G~~ 274 (454)
.|++|++++.|++|..+++ .+.|.+ .+|+++.+|.||+|++..
T Consensus 248 lg~~i~~~~~V~~i~~~~~---~~~v~~~~~~~g~~~~ad~vV~a~~~~ 293 (478)
T 2ivd_A 248 LGDAAHVGARVEGLAREDG---GWRLIIEEHGRRAELSVAQVVLAAPAH 293 (478)
T ss_dssp HGGGEESSEEEEEEECC-----CCEEEEEETTEEEEEECSEEEECSCHH
T ss_pred hhhhEEcCCEEEEEEecCC---eEEEEEeecCCCceEEcCEEEECCCHH
Confidence 4678999999999987653 367777 677889999999998764
No 420
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.51 E-value=0.31 Score=46.15 Aligned_cols=33 Identities=30% Similarity=0.324 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~ 37 (454)
.+|||+|+|.+|..+|..|... |. +|+++|+..
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~~--G~~~I~v~Dr~G 226 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLDL--GVKNVVAVDRKG 226 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEEETTE
T ss_pred cEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCC
Confidence 5799999999999999999998 66 899999973
No 421
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=89.44 E-value=0.22 Score=48.64 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCcc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIV 39 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 39 (454)
.+|.|||.|.+|+++|..|.++ |++|++.|.....
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~--G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR--GVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT--TCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhC--CCEEEEEECCCCc
Confidence 5799999999999999999988 9999999987653
No 422
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=89.40 E-value=0.26 Score=47.02 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=39.4
Q ss_pred ccCccCCceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCcC
Q psy1545 223 HGSSRDTKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPN 276 (454)
Q Consensus 223 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~ 276 (454)
.+.+++.|++++.++.|++++.+++ .+.+.+++| ++.+|.||+|+|....
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~~~~---~~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 157 RELAEARGAKVLTHTRVEDFDISPD---SVKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECSS---CEEEEETTE-EEEEEEEEECCGGGHH
T ss_pred HHHHHHCCCEEEcCcEEEEEEecCC---eEEEEeCCC-EEEeCEEEEecCccHH
Confidence 3444667999999999999987653 356776665 7999999999998754
No 423
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=89.39 E-value=0.31 Score=46.70 Aligned_cols=35 Identities=23% Similarity=0.399 Sum_probs=30.8
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccc
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISA 170 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~ 170 (454)
.+++|||+|.+|+.+|..|. |.+|+++++++++-.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCC
Confidence 58999999999999999986 899999999876643
No 424
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.38 E-value=0.4 Score=44.41 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 4 TYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 4 dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
+|.|||+|..|.+.|..|++.+.+.+|+++|.++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 69999999999999999998533789999998753
No 425
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=89.37 E-value=0.26 Score=47.05 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=28.1
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCC
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDK 166 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~ 166 (454)
++++|||||..|+++|..++ |.+|+++++++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 47999999999999999986 99999999765
No 426
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=89.21 E-value=0.3 Score=46.18 Aligned_cols=32 Identities=25% Similarity=0.391 Sum_probs=28.6
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDK 166 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~ 166 (454)
..+|+|||+|.+|+-+|..|+ |.+|+++++..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 458999999999999999987 99999999754
No 427
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=89.19 E-value=0.25 Score=49.37 Aligned_cols=44 Identities=20% Similarity=0.127 Sum_probs=37.1
Q ss_pred CceEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 229 TKITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
.|+++++++.|++|+.+++ .+.|.+.+|+++++|.||+|++...
T Consensus 225 lg~~i~~~~~V~~i~~~~~---~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 225 LGDRVKLERPVIYIDQTRE---NVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HGGGEESSCCEEEEECSSS---SEEEEETTSCEEEESEEEECSCGGG
T ss_pred cCCcEEcCCeeEEEEECCC---eEEEEECCCeEEEeCEEEECCCHHH
Confidence 4788999999999987653 4668888998999999999998753
No 428
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=88.96 E-value=0.27 Score=48.30 Aligned_cols=48 Identities=15% Similarity=0.023 Sum_probs=36.9
Q ss_pred ccCCceEEEeCceEEEEEcC--CCCccceEEEecCCcEEecCEEEEeeccCcC
Q psy1545 226 SRDTKITIEYSCEVERIVDS--EDDTCNAYVKLTNGHTHACDIVVSAIGVVPN 276 (454)
Q Consensus 226 l~~~gv~i~~~~~v~~i~~~--~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~ 276 (454)
+++.|+++++++.|++|... + ++...|.+ +|+++.+|.||+++|..|.
T Consensus 252 ~~~~G~~i~~~~~V~~i~~~~~~--~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 252 SAIYGGTYMLDTPIDEVLYKKDT--GKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHTTCEEECSCCCCEEEEETTT--TEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHcCCEEECCCEEEEEEEECCC--CeEEEEEE-CCeEEECCEEEECCCccch
Confidence 35578999999999999765 3 23345555 5788999999999998754
No 429
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.90 E-value=0.41 Score=43.53 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 4 TYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 4 dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
+|.|||+|.-|...|..|.+. |++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCcc
Confidence 699999999999999999998 889999998753
No 430
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.86 E-value=0.33 Score=45.11 Aligned_cols=35 Identities=26% Similarity=0.097 Sum_probs=31.4
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCC-CeEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPG-ESIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g-~~v~lie~~~ 37 (454)
|.++|.|||.|.-|...|..|++. | ++|+++++.+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~--G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGR--NAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT--TCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHc--CCCeEEEEeCCC
Confidence 456899999999999999999998 8 8999998865
No 431
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.85 E-value=0.34 Score=44.44 Aligned_cols=35 Identities=26% Similarity=0.246 Sum_probs=29.9
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
|+++|.|||+|..|...|..|.+. +++|+++++.+
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~ 38 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNP 38 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCH
T ss_pred ccceEEEECchHHHHHHHHHHHhC--CCEEEEEeCCH
Confidence 556899999999999999999987 78999998764
No 432
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.78 E-value=0.39 Score=46.28 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
.+|+|||+|.+|+.++..++.. |.+|+++|+.+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~ 206 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPE 206 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHH
Confidence 4699999999999999999998 789999998754
No 433
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=88.65 E-value=0.37 Score=47.67 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++|.|||.|..|+..|..|++.+++++|+++|+++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 589999999999999999999866789999998653
No 434
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=88.60 E-value=0.34 Score=48.08 Aligned_cols=34 Identities=21% Similarity=0.315 Sum_probs=30.6
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHI 168 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~ 168 (454)
..+++|||+|..|+-+|..|. |.+|+++++.+++
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 578999999999999999986 8999999987764
No 435
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.59 E-value=0.4 Score=42.68 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=31.0
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCC----eEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGE----SIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~----~v~lie~~~ 37 (454)
|+++|.|||.|.-|.+.|..|.+. ++ +|+++++++
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~--g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINK--NIVSSNQIICSDLNT 39 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT--TSSCGGGEEEECSCH
T ss_pred CCCeEEEECccHHHHHHHHHHHhC--CCCCCCeEEEEeCCH
Confidence 667899999999999999999997 76 889888764
No 436
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.54 E-value=0.48 Score=43.21 Aligned_cols=34 Identities=18% Similarity=0.186 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
.+|.|||+|.-|...|..|++. |++|+++|+++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHH
Confidence 4799999999999999999998 899999998753
No 437
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.52 E-value=0.39 Score=45.44 Aligned_cols=34 Identities=24% Similarity=0.214 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++|.|||+|.-|.+.|..|++. |++|+++++++.
T Consensus 30 mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~ 63 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK--GQKVRLWSYESD 63 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHH
Confidence 5899999999999999999998 889999998643
No 438
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=88.50 E-value=0.34 Score=46.76 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=28.2
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEEC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVT 34 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie 34 (454)
|.++|.|||+|..|.+.|..|++. .|++|++++
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~-~G~~V~~~~ 33 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASR-DGVEVRVLT 33 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTS-TTEEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHhC-CCCEEEEEe
Confidence 557899999999999999999872 278999998
No 439
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=88.47 E-value=0.37 Score=44.27 Aligned_cols=35 Identities=11% Similarity=0.028 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
+++|.|||.|.-|...|..|++. |++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS--TTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHH
Confidence 45899999999999999999998 899999998764
No 440
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.46 E-value=0.44 Score=42.54 Aligned_cols=35 Identities=26% Similarity=0.270 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCCcc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSGIV 39 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~~~ 39 (454)
.+|+|||+|..|..+|..|++. |. +++|+|+...-
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~--Gv~~i~lvD~d~v~ 67 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA--GVGNLTLLDFDTVS 67 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECCCBCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHc--CCCeEEEEcCCCcc
Confidence 5799999999999999999998 65 89999998643
No 441
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.44 E-value=0.45 Score=43.92 Aligned_cols=32 Identities=22% Similarity=0.365 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHhhcCCCC--eEEEECCCC
Q psy1545 4 TYLIIGGGIAGVSCVEGLAFLHPGE--SIGLVTPSG 37 (454)
Q Consensus 4 dvvIIGgG~aGl~aA~~l~~~~~g~--~v~lie~~~ 37 (454)
+|+|||+|..|.+.|..|+.. +. +|+++|.++
T Consensus 2 kI~VIGaG~vG~~la~~la~~--g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR--GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCH
Confidence 699999999999999999987 66 899999864
No 442
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=88.43 E-value=0.52 Score=40.77 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++|.|||+|..|.+.|..|.+. +.+|+++++++.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~--g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA--GHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHH
Confidence 5799999999999999999998 889999998754
No 443
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.40 E-value=0.45 Score=44.88 Aligned_cols=34 Identities=26% Similarity=0.291 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
+++|.|||+|..|...|..|++. |++|+++++.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCH
Confidence 36899999999999999999997 88999998864
No 444
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=88.37 E-value=0.43 Score=43.20 Aligned_cols=31 Identities=26% Similarity=0.462 Sum_probs=28.4
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKD 165 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~ 165 (454)
+++++|||||.+|...+..|. |++|+++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 799999999999999999887 9999999753
No 445
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=88.34 E-value=0.49 Score=44.06 Aligned_cols=33 Identities=12% Similarity=0.129 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~ 37 (454)
++|.|||+|..|.+.|..|+.. +. +|+|+|.++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~--g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCH
Confidence 5899999999999999999987 66 899999764
No 446
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=88.33 E-value=0.66 Score=45.87 Aligned_cols=38 Identities=21% Similarity=0.424 Sum_probs=35.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCccccc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGIVKAV 42 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~~~~~ 42 (454)
+||+|||||++|++||..|++. |.+|+|+|+++.+++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~--g~~v~v~E~~~~~GGr 77 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA--GFKTLLLEARDRIGGR 77 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT--TCCEEEECSSSBSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHC--CCCEEEEeCCCCCCCc
Confidence 7999999999999999999998 8999999999887654
No 447
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=88.11 E-value=0.52 Score=43.86 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~~ 38 (454)
.+|.|||+|..|.+.|..|+.. +. +++|+|..+.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~--~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLK--ELGDVVLFDIAEG 42 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCch
Confidence 5899999999999999999987 55 9999998653
No 448
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=88.09 E-value=0.33 Score=45.66 Aligned_cols=31 Identities=26% Similarity=0.275 Sum_probs=27.5
Q ss_pred CeEEEEcCchhHHHHHHHhc--C------CcEEEEEeCC
Q psy1545 136 KKIVVIGNGGIATELVHELS--N------VDIVWVVKDK 166 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g------~~V~~i~~~~ 166 (454)
++|+|||||.+|+-+|..|+ | .+|+++++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 36899999999999999886 7 8999999864
No 449
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.05 E-value=0.49 Score=45.28 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
.+|+|||+|.+|+.++..++.. |.+|+++|+.+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAA 206 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCST
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHH
Confidence 4799999999999999999998 789999998754
No 450
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=88.02 E-value=0.38 Score=46.99 Aligned_cols=44 Identities=9% Similarity=-0.034 Sum_probs=34.6
Q ss_pred cCCceEEEeCceEEEEEcCCCCccc-eEEEecCCcEEecCEEEEeeccC
Q psy1545 227 RDTKITIEYSCEVERIVDSEDDTCN-AYVKLTNGHTHACDIVVSAIGVV 274 (454)
Q Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~~-~~v~~~~g~~~~~D~vi~a~G~~ 274 (454)
++.|+++++++.|++|..+++ . +.|.+ +|.++.+|.||+|++..
T Consensus 223 ~~lg~~i~~~~~V~~i~~~~~---~~v~v~~-~~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 223 EALGDDVFLNAPVRTVKWNES---GATVLAD-GDIRVEASRVILAVPPN 267 (453)
T ss_dssp HHHGGGEECSCCEEEEEEETT---EEEEEET-TTEEEEEEEEEECSCGG
T ss_pred HhcCCcEEcCCceEEEEEeCC---ceEEEEE-CCeEEEcCEEEEcCCHH
Confidence 344789999999999987653 3 55655 67789999999999875
No 451
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.02 E-value=0.36 Score=45.87 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=30.7
Q ss_pred Ccc-cEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 1 MEF-TYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 1 M~~-dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
|++ +|.|||+|.-|.+.|..|.+. |++|+++++.+
T Consensus 13 m~M~kI~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~ 48 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTALAMVLSKK--CREVCVWHMNE 48 (366)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTT--EEEEEEECSCH
T ss_pred hccCeEEEECCCHHHHHHHHHHHhC--CCEEEEEECCH
Confidence 334 899999999999999999987 88999998864
No 452
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=87.99 E-value=0.44 Score=43.91 Aligned_cols=34 Identities=21% Similarity=0.142 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
+++|.|||.|.-|...|..|++. |++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCH
Confidence 35799999999999999999998 89999998865
No 453
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=87.84 E-value=0.58 Score=43.49 Aligned_cols=35 Identities=11% Similarity=0.045 Sum_probs=29.9
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCC
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSG 37 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~ 37 (454)
-..+|.|||+|..|.+.|..|+.. +. +++++|..+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~--~~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIK--QLGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCh
Confidence 036899999999999999999987 44 999999875
No 454
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.82 E-value=0.42 Score=45.59 Aligned_cols=36 Identities=8% Similarity=0.057 Sum_probs=31.3
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCC-------CeEEEECCCCc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPG-------ESIGLVTPSGI 38 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g-------~~v~lie~~~~ 38 (454)
|.++|.|||+|.-|.+.|..|++. | .+|+++++.+.
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~--G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTN--AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHH--HHHCTTBCSCEEEECCSCC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc--CCccCCCCCeEEEEECChh
Confidence 345899999999999999999987 6 89999998754
No 455
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=87.79 E-value=0.42 Score=45.94 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=31.0
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCccc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHISA 170 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~~ 170 (454)
..+++|||+|.+|+-+|..|+ |.+|+++++++++-.
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGG 66 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCC
Confidence 358999999999999999886 899999998876543
No 456
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.72 E-value=0.45 Score=44.15 Aligned_cols=34 Identities=26% Similarity=0.188 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
.+|.|||+|.-|...|..++.. |++|+|+|.++.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHH
Confidence 4699999999999999999998 999999998753
No 457
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=87.52 E-value=0.42 Score=44.45 Aligned_cols=34 Identities=6% Similarity=0.249 Sum_probs=29.3
Q ss_pred CCeEEEEcCchhHHHHHHHhc----CCcEEEEEeCCCc
Q psy1545 135 AKKIVVIGNGGIATELVHELS----NVDIVWVVKDKHI 168 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~----g~~V~~i~~~~~~ 168 (454)
...|+|||+|+.|+-+|..|+ |.+|+++++.+.+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 457999999999999998873 8999999987654
No 458
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=87.48 E-value=0.49 Score=44.98 Aligned_cols=33 Identities=24% Similarity=0.473 Sum_probs=29.3
Q ss_pred eEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCcc
Q psy1545 137 KIVVIGNGGIATELVHELS--NVDIVWVVKDKHIS 169 (454)
Q Consensus 137 ~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~~ 169 (454)
+++|||+|..|+-+|..|. |.+|+++++++++-
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 6899999999999999987 89999999877543
No 459
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=87.43 E-value=0.44 Score=46.88 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=34.3
Q ss_pred eEEEeCceEEEEEcCCCCccceEEEecCCcEEecCEEEEeeccCc
Q psy1545 231 ITIEYSCEVERIVDSEDDTCNAYVKLTNGHTHACDIVVSAIGVVP 275 (454)
Q Consensus 231 v~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p 275 (454)
++|++++.|++|+..++ .+.|.+.+| ++.+|.||+|++...
T Consensus 249 ~~i~~~~~V~~i~~~~~---~~~v~~~~g-~~~ad~vV~a~p~~~ 289 (475)
T 3lov_A 249 SEIRLETPLLAISREDG---RYRLKTDHG-PEYADYVLLTIPHPQ 289 (475)
T ss_dssp CEEESSCCCCEEEEETT---EEEEECTTC-CEEESEEEECSCHHH
T ss_pred CEEEcCCeeeEEEEeCC---EEEEEECCC-eEECCEEEECCCHHH
Confidence 69999999999987653 477888888 799999999987643
No 460
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=87.43 E-value=0.49 Score=49.01 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=29.2
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHI 168 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~ 168 (454)
.+|+|||||..|+-+|..|+ |.+|+++++.+.+
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEAP 307 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 58999999999999999986 9999999986533
No 461
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.43 E-value=0.39 Score=40.41 Aligned_cols=34 Identities=21% Similarity=0.136 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
.+++|+|+|..|...|..|.+.. |.+|+++|+++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARY-GKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCH
Confidence 47999999999999999998741 56899998865
No 462
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=87.31 E-value=0.42 Score=46.46 Aligned_cols=33 Identities=12% Similarity=0.230 Sum_probs=29.3
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CC-cEEEEEeCCC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NV-DIVWVVKDKH 167 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~-~V~~i~~~~~ 167 (454)
..+|+|||||..|+-+|..|+ |. +|+++++.+.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 357999999999999999986 88 9999998764
No 463
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.27 E-value=0.62 Score=37.87 Aligned_cols=31 Identities=13% Similarity=0.252 Sum_probs=27.8
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKD 165 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~ 165 (454)
.++++|+|+|.+|..++..|. |.+|++++++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 578999999999999999986 8999999874
No 464
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=87.21 E-value=0.32 Score=39.19 Aligned_cols=33 Identities=9% Similarity=0.163 Sum_probs=28.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
.+++|||+|..|...+..|.+. +.+|+++++.+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~--g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP--QYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT--TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCCH
Confidence 4799999999999999999986 77888888764
No 465
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=87.21 E-value=0.46 Score=49.41 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=29.2
Q ss_pred CeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc
Q psy1545 136 KKIVVIGNGGIATELVHELS--NVDIVWVVKDKHI 168 (454)
Q Consensus 136 ~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~ 168 (454)
.+|+|||||..|+-+|..|+ |.+|+++++.+.+
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 57999999999999999986 9999999986543
No 466
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.19 E-value=0.63 Score=42.41 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=29.7
Q ss_pred ccEEEECC-CHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGG-GIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGg-G~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
++|.|||+ |.-|.+.|..|.+. |++|+++++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCH
Confidence 58999999 99999999999997 88999998754
No 467
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.16 E-value=0.46 Score=45.93 Aligned_cols=34 Identities=18% Similarity=0.048 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
.+|+|||.|..|...|..|.+. |.+|++||.++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHH
Confidence 4799999999999999999998 899999999854
No 468
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=86.81 E-value=0.6 Score=46.09 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
++|.|||.|..|+..|..|++. |++|+++|+++
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCH
Confidence 6899999999999999999998 89999999874
No 469
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=86.74 E-value=0.55 Score=43.78 Aligned_cols=78 Identities=15% Similarity=0.137 Sum_probs=0.0
Q ss_pred hcCCeEEEEcCchhHHH-HHHHhc--CCcEEEEEeCCCccccccCCcchhhhHHHhhccCCCChhhhhhhcccccCCCCC
Q psy1545 133 KSAKKIVVIGNGGIATE-LVHELS--NVDIVWVVKDKHISATFLDPGAAEFFQDSINKTNTAKPETIFKRMRYNTGGEKG 209 (454)
Q Consensus 133 ~~~~~vvVvG~G~~g~e-~a~~l~--g~~V~~i~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (454)
...+++.|||.|-+|+. +|..|. |.+|++. |........+.|.+
T Consensus 2 ~~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~-----------D~~~~~~~~~~L~~---------------------- 48 (326)
T 3eag_A 2 NAMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGC-----------DAKMYPPMSTQLEA---------------------- 48 (326)
T ss_dssp -CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEE-----------ESSCCTTHHHHHHH----------------------
T ss_pred CCCcEEEEEEECHHHHHHHHHHHHhCCCEEEEE-----------cCCCCcHHHHHHHh----------------------
Q ss_pred CCCCCccccccccccCccCCceEEEeCceEEEEE-cCCCCccceEEEecCCcEEecCEEEEeeccCcCccccc
Q psy1545 210 PSLGPDWHTQVNLHGSSRDTKITIEYSCEVERIV-DSEDDTCNAYVKLTNGHTHACDIVVSAIGVVPNSNIQV 281 (454)
Q Consensus 210 ~~l~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~-~~~~~~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~ 281 (454)
.||+++.+.....+. .+- |.||.++|..|+.+ .+
T Consensus 49 -------------------~gi~v~~g~~~~~l~~~~~------------------d~vV~Spgi~~~~p-~~ 83 (326)
T 3eag_A 49 -------------------LGIDVYEGFDAAQLDEFKA------------------DVYVIGNVAKRGMD-VV 83 (326)
T ss_dssp -------------------TTCEEEESCCGGGGGSCCC------------------SEEEECTTCCTTCH-HH
T ss_pred -------------------CCCEEECCCCHHHcCCCCC------------------CEEEECCCcCCCCH-HH
No 470
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=86.69 E-value=0.66 Score=42.65 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
.+|.|||+|.-|...|..|++. |++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCH
Confidence 4699999999999999999998 89999999875
No 471
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=86.65 E-value=0.66 Score=42.89 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
++|.|||+|..|.+.|..|.+.+...+|+++|+.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999882116899999864
No 472
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.62 E-value=0.72 Score=42.85 Aligned_cols=35 Identities=23% Similarity=0.298 Sum_probs=29.1
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
++|+|||+|..|.+.|..|...+...+++++|..+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 58999999999999999999872223899999864
No 473
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=86.59 E-value=0.66 Score=42.08 Aligned_cols=36 Identities=22% Similarity=0.182 Sum_probs=31.1
Q ss_pred CcccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 1 MEFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 1 M~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++++|+|.|+|..|...+..|.+. |.+|+++++...
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~ 37 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQ--GHEVTGLRRSAQ 37 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT--TCCEEEEECTTS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCcc
Confidence 036899999999999999999998 889999988643
No 474
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.48 E-value=0.43 Score=41.65 Aligned_cols=34 Identities=24% Similarity=0.231 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEE-ECCCC
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGL-VTPSG 37 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~l-ie~~~ 37 (454)
+++|.|||+|.-|.+.|..|.+. +.+|++ +++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~--g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA--QIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT--TCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCCH
Confidence 36899999999999999999998 888888 77754
No 475
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=86.47 E-value=0.75 Score=42.22 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=29.9
Q ss_pred ccEEEEC-CCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIG-GGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIG-gG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
.+|.||| .|.-|.+.|..|++. |++|+++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS--GYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCc
Confidence 4799999 999999999999998 88999998765
No 476
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.38 E-value=0.61 Score=44.18 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
.+|+|+|+|.+|..++..|+.. |.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCH
Confidence 4699999999999999999998 77999998864
No 477
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.27 E-value=0.66 Score=43.03 Aligned_cols=33 Identities=27% Similarity=0.170 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCC--eEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGE--SIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~--~v~lie~~~ 37 (454)
++|.|||.|.-|.+.|..|++. |. +|+++|+++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCH
Confidence 5799999999999999999998 66 899998865
No 478
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.20 E-value=0.39 Score=42.28 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=29.4
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
+.+++|+|+|..|...|..|.+. +. |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~--g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS--EV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS--EE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhC--Ce-EEEEECCHH
Confidence 35799999999999999999987 78 999998653
No 479
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.16 E-value=0.82 Score=41.22 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
.+++|||+|-+|.+++..|.+. |.+|++++|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~--G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ--GLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 4699999999999999999998 68999998874
No 480
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=86.15 E-value=0.96 Score=44.86 Aligned_cols=75 Identities=17% Similarity=0.086 Sum_probs=50.9
Q ss_pred ccEEEECCCHHHHH-HHHHHhhcCCCCeEEEECCCCccccccccccccccccccchhhhHHHHHhc-CcEEEcceEEEEe
Q psy1545 3 FTYLIIGGGIAGVS-CVEGLAFLHPGESIGLVTPSGIVKAVTKTVPVTKLLSDITVEETDANKFEG-LCTVIVDTVAAID 80 (454)
Q Consensus 3 ~dvvIIGgG~aGl~-aA~~l~~~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~v~~i~ 80 (454)
.+|.|||.|-+|++ +|..|.++ |.+|++.|.... ...+.+.. ++++..+. +
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~--G~~V~~~D~~~~---------------------~~~~~l~~~gi~~~~g~----~ 75 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANE--GYQISGSDLAPN---------------------SVTQHLTALGAQIYFHH----R 75 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHT--TCEEEEECSSCC---------------------HHHHHHHHTTCEEESSC----C
T ss_pred CEEEEEEEcHhhHHHHHHHHHhC--CCeEEEEECCCC---------------------HHHHHHHHCCCEEECCC----C
Confidence 47999999999997 68889998 999999987531 01223334 77766541 1
Q ss_pred CcccEEEeccCcEEEecEEEEecCCCCCCCCCC
Q psy1545 81 PRVNCVITEKQNRIKYKTLCICTGASPRKIWYS 113 (454)
Q Consensus 81 ~~~~~v~~~~g~~i~~d~lviAtG~~p~~~~~~ 113 (454)
++. + . .+|.+|+++|-.+..|.+.
T Consensus 76 ~~~--~---~----~~d~vV~Spgi~~~~p~~~ 99 (494)
T 4hv4_A 76 PEN--V---L----DASVVVVSTAISADNPEIV 99 (494)
T ss_dssp GGG--G---T----TCSEEEECTTSCTTCHHHH
T ss_pred HHH--c---C----CCCEEEECCCCCCCCHHHH
Confidence 111 1 1 3799999999877665543
No 481
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=86.11 E-value=0.57 Score=48.41 Aligned_cols=34 Identities=18% Similarity=0.414 Sum_probs=30.4
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHI 168 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~ 168 (454)
.++++|||+|..|+.+|..|. |.+|+++++.+++
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 689999999999999999886 9999999987653
No 482
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.05 E-value=0.62 Score=36.84 Aligned_cols=31 Identities=32% Similarity=0.443 Sum_probs=26.7
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKD 165 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~ 165 (454)
..+++|+|+|.+|..+|..|. |.+|++++++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 468999999999999999886 8899998764
No 483
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=85.96 E-value=0.6 Score=45.83 Aligned_cols=33 Identities=21% Similarity=0.156 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
.+|+|||||..|...+..|.+. |.+|++++++.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~--ga~V~vi~~~~ 45 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEA--GARLTVNALTF 45 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TBEEEEEESSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--cCEEEEEcCCC
Confidence 5799999999999999999998 89999999863
No 484
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=85.87 E-value=0.87 Score=42.25 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
++|+|||+|..|.+.|..|...+...++.|+|..+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 58999999999999999999873234899998753
No 485
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=85.73 E-value=0.56 Score=35.81 Aligned_cols=31 Identities=23% Similarity=0.305 Sum_probs=26.9
Q ss_pred CCeEEEEcCchhHHHHHHHhc--C-CcEEEEEeC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--N-VDIVWVVKD 165 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g-~~V~~i~~~ 165 (454)
.++++|+|+|.+|..++..|. | .+|+++.|+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 578999999999999999886 7 788888764
No 486
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=85.72 E-value=0.65 Score=42.35 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++|.|||.|.-|...|..|++. |++|+++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA--GFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH--TCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCHH
Confidence 4799999999999999999998 899999988753
No 487
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=85.67 E-value=0.85 Score=38.74 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=31.5
Q ss_pred Cc-ccEEEECC-CHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 1 ME-FTYLIIGG-GIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 1 M~-~dvvIIGg-G~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
|. ++++|+|| |..|...+..|.+. |.+|+++++.+.
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~ 38 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSS 38 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGG
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChh
Confidence 53 67999999 99999999999998 899999988653
No 488
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.64 E-value=0.67 Score=43.04 Aligned_cols=34 Identities=26% Similarity=0.188 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
.+|.|||+|.-|.+.|..|++. |++|+++|+++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHH
Confidence 4699999999999999999998 899999998753
No 489
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=85.59 E-value=0.79 Score=41.99 Aligned_cols=32 Identities=19% Similarity=0.188 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHhhcCCCC--eEEEECCCC
Q psy1545 4 TYLIIGGGIAGVSCVEGLAFLHPGE--SIGLVTPSG 37 (454)
Q Consensus 4 dvvIIGgG~aGl~aA~~l~~~~~g~--~v~lie~~~ 37 (454)
+|.|||+|..|.+.|..|+.. +. +++|+|..+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~--~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECCh
Confidence 699999999999999999988 55 899999865
No 490
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=85.55 E-value=0.6 Score=37.28 Aligned_cols=31 Identities=29% Similarity=0.390 Sum_probs=27.7
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKD 165 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~ 165 (454)
.++++|+|+|.+|..+|..|. |.+|++++++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 468999999999999999986 9999999764
No 491
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=85.55 E-value=0.82 Score=42.36 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCC-eEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGE-SIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~-~v~lie~~~ 37 (454)
.+|.|||+|..|.+.|..|+.. +. +++++|..+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~--g~~~v~l~D~~~ 42 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK--ELADVVLVDIPQ 42 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeccc
Confidence 4799999999999999999987 66 999999873
No 492
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=85.54 E-value=0.92 Score=42.54 Aligned_cols=36 Identities=22% Similarity=0.367 Sum_probs=29.7
Q ss_pred cccEEEECC-CHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 2 EFTYLIIGG-GIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 2 ~~dvvIIGg-G~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
..+|+|||+ |..|.++|..+..++...+++++|...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 468999998 999999999999873335899999753
No 493
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=85.49 E-value=0.81 Score=40.63 Aligned_cols=35 Identities=23% Similarity=0.330 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 2 EFTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
.++|.|||.|.-|.+.|..|++. |++|+++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~--G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADL--GHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCChh
Confidence 36799999999999999999998 889999988753
No 494
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=85.43 E-value=0.65 Score=49.28 Aligned_cols=34 Identities=18% Similarity=0.414 Sum_probs=30.0
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeCCCc
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKDKHI 168 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~~~~ 168 (454)
.++|+|||+|+.|+.+|..|. |.+|+++++.+++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 468999999999999999986 9999999987654
No 495
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=85.35 E-value=0.66 Score=37.12 Aligned_cols=31 Identities=16% Similarity=0.379 Sum_probs=27.9
Q ss_pred CCeEEEEcCchhHHHHHHHhc--CCcEEEEEeC
Q psy1545 135 AKKIVVIGNGGIATELVHELS--NVDIVWVVKD 165 (454)
Q Consensus 135 ~~~vvVvG~G~~g~e~a~~l~--g~~V~~i~~~ 165 (454)
.++++|+|.|.+|..+|..|. |.+|++++++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999996 9999999874
No 496
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=85.20 E-value=0.75 Score=45.26 Aligned_cols=36 Identities=19% Similarity=0.232 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCCc
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSGI 38 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~~ 38 (454)
++|.|||.|..|...|..|++.++|++|+++|+++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 589999999999999999999866789999998753
No 497
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=85.13 E-value=0.87 Score=42.25 Aligned_cols=31 Identities=26% Similarity=0.329 Sum_probs=28.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPS 36 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~ 36 (454)
++|.|||+|.-|...|..|++. |.+|+++ +.
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARA--GHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHC--CCeEEEE-Ec
Confidence 5799999999999999999998 8899998 54
No 498
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=85.10 E-value=0.84 Score=42.39 Aligned_cols=32 Identities=25% Similarity=0.228 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHhhcCCCC--eEEEECCCC
Q psy1545 4 TYLIIGGGIAGVSCVEGLAFLHPGE--SIGLVTPSG 37 (454)
Q Consensus 4 dvvIIGgG~aGl~aA~~l~~~~~g~--~v~lie~~~ 37 (454)
+|.|||+|..|.+.|..|++. +. +|+++|+.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~--g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK--GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCCh
Confidence 699999999999999999998 66 899999864
No 499
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=85.10 E-value=0.57 Score=45.71 Aligned_cols=50 Identities=20% Similarity=0.233 Sum_probs=38.4
Q ss_pred cCccCCceEEEeCceEEEEEc---------------CCCCccceEEEecCCcEE--ecCEEEEeeccCcC
Q psy1545 224 GSSRDTKITIEYSCEVERIVD---------------SEDDTCNAYVKLTNGHTH--ACDIVVSAIGVVPN 276 (454)
Q Consensus 224 ~~l~~~gv~i~~~~~v~~i~~---------------~~~~~~~~~v~~~~g~~~--~~D~vi~a~G~~p~ 276 (454)
+.+++.|++++++++|+++.. .+ +....|.+++| ++ .+|.||+|+|....
T Consensus 189 ~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~--~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 189 RRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE--ARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp HHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC--EEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred HHHHhCCCEEEcCCeEEEEEecccccccccccccccCC--CceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 444668999999999999986 33 22346777777 68 99999999997643
No 500
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=85.08 E-value=0.85 Score=39.58 Aligned_cols=33 Identities=18% Similarity=0.014 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHhhcCCCCeEEEECCCC
Q psy1545 3 FTYLIIGGGIAGVSCVEGLAFLHPGESIGLVTPSG 37 (454)
Q Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~~~g~~v~lie~~~ 37 (454)
++|.|||+|..|...|..|.+. +++|+++++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~--g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS--GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 5799999999999999999987 78899888753
Done!