BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15450
(659 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357621647|gb|EHJ73416.1| putative pol-like protein [Danaus plexippus]
Length = 1133
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 2/219 (0%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
FK + +IFTAE+ AIL+A+ +V S K N II +DSKSCL+ + + + IL
Sbjct: 891 FKFPSEISIFTAESIAILEAVSFVESHKLNNSIIFSDSKSCLQAIARNPFISKHNYPYIL 950
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAV 403
I L Q NI VR W+ H+GI GNE VD AK+ A T ++ + + D+ +
Sbjct: 951 KIKDILFRCQSSNIQVRLAWIPSHSGIHGNETVDYYAKD-ATNTGCMDHFGVYPNDLIPI 1009
Query: 404 TDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFN-RLRSNHAI 462
+ W + + + +KG +Y ++ ++ +PWF L K + + RLR HA
Sbjct: 1010 AKQRFFSSWTQYWLKTSRSKGKYYADVQSLIPFRPWFCNFKNLHKRVSSIICRLRLGHAC 1069
Query: 463 CQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVTL 501
+L K+ I ++LC+ L+ HI CP+ +L
Sbjct: 1070 TPVHLAKLRIKDSSLCECGLDEGSPDHIFFTCPRLSSSL 1108
>gi|307189101|gb|EFN73572.1| hypothetical protein EAG_08495 [Camponotus floridanus]
Length = 246
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 2/214 (0%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
+KL + +IF+AE AI+ A+ Y+ I TDS+S +E L N + + S+LIL
Sbjct: 22 YKLDRYFSIFSAECIAIMCAMDYILEEGIKRSAIFTDSRSMVETLSN-GLLDRDLSYLIL 80
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAV 403
+ L N+ V +WV H GI GNE D LA E AR ++++ P P D+ ++
Sbjct: 81 ALKNKLRSAYVQNLDVVIVWVPSHVGILGNETADLLAGEAARQEESVDYLP-PHTDLYSL 139
Query: 404 TDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAIC 463
++ + +++Q+ +G Y +L+ +KPWFA R I T R+RSNH
Sbjct: 140 VKEKYFSDIEKYLLAQSEIRGAQYFSLYPPFARKPWFAGLDLSRAEITTICRIRSNHYNL 199
Query: 464 QAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
L++ + C L +D+ H++ CP +
Sbjct: 200 NFSLYRCGLVRRPDCLCGLPYQDINHVLWSCPMF 233
>gi|242022987|ref|XP_002431918.1| reverse transcriptase, putative [Pediculus humanus corporis]
gi|212517262|gb|EEB19180.1| reverse transcriptase, putative [Pediculus humanus corporis]
Length = 1168
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 57/75 (76%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVK 105
NNI P EQ GC +G+ GCK++L+++K+I K+K KNLS+AWID KA+D+ PHEW+++
Sbjct: 517 NNIFPPEQYGCRKGSYGCKEVLLINKLIMASAKQKRKNLSMAWIDYQKAFDSVPHEWIIE 576
Query: 106 VIQMYKIDLKSATFC 120
+++YK+D K FC
Sbjct: 577 ALKIYKVDPKITAFC 591
>gi|242014730|ref|XP_002428038.1| reverse transcriptase, putative [Pediculus humanus corporis]
gi|212512557|gb|EEB15300.1| reverse transcriptase, putative [Pediculus humanus corporis]
Length = 1168
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 57/75 (76%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVK 105
NNI P EQ GC +G+ GCK++L+++K+I K+K KNLS+AWID KA+D+ PHEW+++
Sbjct: 517 NNIFPPEQYGCRKGSYGCKEVLLINKLIMASAKQKRKNLSMAWIDYQKAFDSVPHEWIIE 576
Query: 106 VIQMYKIDLKSATFC 120
+++YK+D K FC
Sbjct: 577 ALKIYKVDPKITAFC 591
>gi|242019801|ref|XP_002430347.1| reverse transcriptase, putative [Pediculus humanus corporis]
gi|212515471|gb|EEB17609.1| reverse transcriptase, putative [Pediculus humanus corporis]
Length = 700
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 57/75 (76%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVK 105
NNI P EQ GC +G+ GCK++L+++K+I K+K KNLS+AWID KA+D+ PHEW+++
Sbjct: 517 NNIFPPEQYGCRKGSYGCKEVLLINKLIMASAKQKRKNLSMAWIDYQKAFDSVPHEWIIE 576
Query: 106 VIQMYKIDLKSATFC 120
+++YK+D TFC
Sbjct: 577 ALKIYKVDPNITTFC 591
>gi|242023142|ref|XP_002431995.1| reverse transcriptase, putative [Pediculus humanus corporis]
gi|212517346|gb|EEB19257.1| reverse transcriptase, putative [Pediculus humanus corporis]
Length = 399
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 57/75 (76%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVK 105
NNI P EQ GC +G+ GCK++L+++K+I K+K KNLS+AWID KA+D+ PHEW+++
Sbjct: 58 NNIFPPEQYGCRKGSYGCKEVLLINKLIMASAKQKRKNLSMAWIDYQKAFDSVPHEWIIE 117
Query: 106 VIQMYKIDLKSATFC 120
+++YK+D K FC
Sbjct: 118 ALKIYKVDPKITAFC 132
>gi|242004074|ref|XP_002422963.1| reverse transcriptase, putative [Pediculus humanus corporis]
gi|212505879|gb|EEB10225.1| reverse transcriptase, putative [Pediculus humanus corporis]
Length = 759
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 57/75 (76%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVK 105
NNI P EQ GC +G+ GCK++L+++K+I K+K KNLS+AWID KA+D+ PHEW+++
Sbjct: 108 NNIFPPEQYGCRKGSYGCKEVLLINKLIMASAKQKRKNLSMAWIDYQKAFDSVPHEWIIE 167
Query: 106 VIQMYKIDLKSATFC 120
+++YK+D K FC
Sbjct: 168 ALKIYKVDPKITAFC 182
>gi|242006068|ref|XP_002423878.1| reverse transcriptase, putative [Pediculus humanus corporis]
gi|212507124|gb|EEB11140.1| reverse transcriptase, putative [Pediculus humanus corporis]
Length = 887
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 56/75 (74%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVK 105
NNI P EQ GC +G+ GCK++L+++K+I K+K KNLS+AWID KA+D+ PHEW+++
Sbjct: 517 NNIFPPEQYGCRKGSYGCKEVLLINKLIMASAKQKRKNLSMAWIDYQKAFDSVPHEWIIE 576
Query: 106 VIQMYKIDLKSATFC 120
+++YK+D FC
Sbjct: 577 ALKIYKVDPNITAFC 591
>gi|242017106|ref|XP_002429033.1| reverse transcriptase, putative [Pediculus humanus corporis]
gi|212513888|gb|EEB16295.1| reverse transcriptase, putative [Pediculus humanus corporis]
Length = 1168
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 56/75 (74%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVK 105
NNI P EQ GC +G+ GCK++L+++K+I K+K KNLS+AWID KA+D+ PHEW+++
Sbjct: 517 NNIFPPEQYGCRKGSYGCKEVLLINKLIMASAKQKRKNLSMAWIDYQKAFDSVPHEWIIE 576
Query: 106 VIQMYKIDLKSATFC 120
+++YK+D FC
Sbjct: 577 ALKIYKVDPNITAFC 591
>gi|242014754|ref|XP_002428050.1| reverse transcriptase, putative [Pediculus humanus corporis]
gi|212512569|gb|EEB15312.1| reverse transcriptase, putative [Pediculus humanus corporis]
Length = 1168
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 56/75 (74%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVK 105
NNI P EQ GC +G+ GCK++L+++K+I K+K KNLS+AWID KA+D+ PHEW+++
Sbjct: 517 NNIFPPEQYGCRKGSYGCKEVLLINKLIMASAKQKRKNLSMAWIDYQKAFDSVPHEWIIE 576
Query: 106 VIQMYKIDLKSATFC 120
+++YK+D FC
Sbjct: 577 ALKIYKVDPNITAFC 591
>gi|242022883|ref|XP_002431867.1| reverse transcriptase, putative [Pediculus humanus corporis]
gi|212517201|gb|EEB19129.1| reverse transcriptase, putative [Pediculus humanus corporis]
Length = 1168
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 56/75 (74%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVK 105
NNI P EQ GC +G+ GCK++L+++K+I K+K KNLS+AWID KA+D+ PHEW+++
Sbjct: 517 NNIFPPEQYGCRKGSYGCKEVLLINKLIMASAKQKRKNLSMAWIDYQKAFDSVPHEWIIE 576
Query: 106 VIQMYKIDLKSATFC 120
+++YK+D FC
Sbjct: 577 ALKIYKVDPNITAFC 591
>gi|242022125|ref|XP_002431492.1| reverse transcriptase, putative [Pediculus humanus corporis]
gi|212516780|gb|EEB18754.1| reverse transcriptase, putative [Pediculus humanus corporis]
Length = 377
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 56/75 (74%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVK 105
NNI P EQ GC +G+ GCK++L+++K+I K+K KNLS+AWID KA+D+ PHEW+++
Sbjct: 144 NNIFPPEQYGCRKGSYGCKEVLLINKLIMASAKQKRKNLSMAWIDYQKAFDSVPHEWIIE 203
Query: 106 VIQMYKIDLKSATFC 120
+++YK+D FC
Sbjct: 204 ALKIYKVDPNITAFC 218
>gi|307176190|gb|EFN65847.1| hypothetical protein EAG_02388 [Camponotus floridanus]
Length = 220
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 291 TIFTAEAFAILQALKYVS---SIKE---NEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
+ FTAEAFAI AL+ + S KE VII +D + L+ LKN S + +++
Sbjct: 1 STFTAEAFAIRTALEILQGSYSKKEYNHENVIIFSDCQGVLKALKNNKLSVYHNRYIMEA 60
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA--RGTDALNPYPIPVQDVRA 402
+ ++ I + IW+ H G GNE D LAK+ A R D+++ +P QD+ +
Sbjct: 61 RELYWKIVTQFRIKIYLIWIPSHKGFIGNEIADILAKQGASERADDSIH---VPFQDLTS 117
Query: 403 VTDMQHEIQWRENVMSQNNNKGL-FYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
V + ++ +++Q KG ++ N + + KK WF R F NR+R+NH
Sbjct: 118 VFKNEEWNDTQDRILTQARVKGQHYFSNYYKRSRKKSWFYGIQADRYFCTLINRIRANHY 177
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
A L + + C+ + ED+ H++ C +Y
Sbjct: 178 NLNASLARKEYIASAQCECGYDYEDIDHVVWSCDRY 213
>gi|270017016|gb|EFA13462.1| hypothetical protein TcasGA2_TC005062 [Tribolium castaneum]
Length = 679
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 62/97 (63%)
Query: 44 NDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWM 103
++N IL EQ+GC GCK+ L++D II + KK+++N+SVAW+D KA+D+ PH ++
Sbjct: 40 DENQILTEEQKGCRRKTQGCKEQLIIDGIIANEAKKRHRNVSVAWLDYQKAFDSVPHSYL 99
Query: 104 VKVIQMYKIDLKSATFCVFCVFHGRRLVIVMSDFNNS 140
+ V+ +YK++ K F C+ R ++V +D S
Sbjct: 100 IDVLNIYKVNGKIVNFLQHCMKSWRTQLLVNNDRKTS 136
>gi|111610032|gb|ABH11532.1| reverse transcriptase [Phengaris teleius]
Length = 135
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 36 ESLNTAGKNDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAY 95
+ LNT DN I+P EQ+GC +G+ GCK+ L++D I KK YKNL A+ID KA+
Sbjct: 13 QKLNTHI-TDNKIIPQEQKGCAKGSMGCKEQLIIDAQIHNQTKKDYKNLYYAYIDYQKAF 71
Query: 96 DNCPHEWMVKVIQMYKIDLKSATFCVFCVFHGRRLVIVMSDFNNSDGEDITMSGDCPRDK 155
D+ PH W++ V+++YKI L S V V H S N T+S + K
Sbjct: 72 DSVPHSWLIHVLKIYKI-LNSLIHVVQYVMHN------WSTKLNLRTVSTTVSTSPIKIK 124
Query: 156 RGI 158
RGI
Sbjct: 125 RGI 127
>gi|125901787|gb|ABN58714.1| pol-like protein [Biomphalaria glabrata]
Length = 1222
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
+L + +IFTAE AIL AL V + + ++ II +DSKS L+ L L+
Sbjct: 984 RLPDGCSIFTAELHAILLALMAVKASERSKFIICSDSKSALQALGRMKTD----IPLVHK 1039
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVT 404
K L + V FIWV H GI GNEA DR AK A++ IP D+R
Sbjct: 1040 SLKLLDLITADRRDVTFIWVPSHVGIEGNEAADREAKRAL--NHAVSGTQIPYSDLRQSI 1097
Query: 405 DMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL-RKFIVTFNRLRSNHA-I 462
+W QN + + L I W + L R+ T +RLR H I
Sbjct: 1098 ASATYREW------QNRWEAETHSKLRQIVADVRWRPTSKGLTRRGSTTMSRLRIGHTYI 1151
Query: 463 CQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
+++ K P LC+ C R + HI++ CP+YQ
Sbjct: 1152 THSFVLKREEPP--LCEYCDSRLTVEHILVDCPRYQ 1185
>gi|111610038|gb|ABH11535.1| reverse transcriptase [Phengaris nausithous]
Length = 135
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 36 ESLNTAGKNDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAY 95
+ LNT DN I+P EQ+GC +G+ GCK+ L++D I + KK +KNL A+ID KA+
Sbjct: 13 QKLNTHI-TDNKIIPEEQKGCAKGSMGCKEQLIIDAQIHNETKKDHKNLYYAYIDYQKAF 71
Query: 96 DNCPHEWMVKVIQMYKI 112
D+ PH W++ V+++YKI
Sbjct: 72 DSVPHSWLIHVLKIYKI 88
>gi|2736044|gb|AAB94039.1| reverse transcriptase [Aphonopelma sp. WDB-1998]
Length = 488
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 106/238 (44%), Gaps = 24/238 (10%)
Query: 281 SGTFKLKNFATIFTAEAFAILQA-LKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPS 339
S F L T + AEA AIL+A + + + N+V II+DS+S L+ L T + S
Sbjct: 272 SAGFSLSKHHTHYQAEAVAILKATMWFAEECQGNKVAIISDSQSALKALYRTQEV----S 327
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD 399
I DI + ++ ++ + W +GHAG AGNE DR AKE A + P PV
Sbjct: 328 PTIRDIKRTITTIKRQGRQIDLYWTKGHAGQAGNEMADRAAKE-AVISGQRYVMPRPVSW 386
Query: 400 VRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPW-FAKAIPLRKFIVTFNRLRS 458
V+A+ + +W ++KG N+ + K W F+K I ++ +
Sbjct: 387 VKALIKKETLREW--ATRWAGSDKGRHTHNIISAPGFKEWIFSKEI---------TQILT 435
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVTLAIALVGSGQDARLVN 516
NH +Y+H+ + + LC C D H C + A+ G D R N
Sbjct: 436 NHGRTPSYMHRFGLTSSPLC-SCGGVGDWEHYFFFCRSTE-----AVAGVSADYRTYN 487
>gi|111610048|gb|ABH11540.1| reverse transcriptase [Phengaris alcon]
Length = 135
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 36 ESLNTAGKNDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAY 95
+ LNT DN I+P EQ+GC +G+ GCK+ L++D I KK +KNL A+ID KA+
Sbjct: 13 QKLNTHI-TDNKIIPEEQKGCAKGSMGCKEQLIVDAQIHNQTKKDHKNLYYAYIDYQKAF 71
Query: 96 DNCPHEWMVKVIQMYKI 112
D+ PH W++ V+++YKI
Sbjct: 72 DSVPHSWLIHVLKIYKI 88
>gi|357610240|gb|EHJ66888.1| non-LTR retrotransposon CATS [Danaus plexippus]
Length = 476
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 111/248 (44%), Gaps = 21/248 (8%)
Query: 277 QNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNG 336
+N S FKL N T+F AE AIL+A ++ SS + +I +DS + + ++N +SN
Sbjct: 216 RNPVSKKFKLHNSCTVFQAELLAILKACEWASSNQHTSTVIYSDSSAAILAIQN--RSNT 273
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIP 396
+P L+ I + H S+ F WV+ H GI GNEA D AK A+ A + P
Sbjct: 274 HP--LVAKIHSTVHHTSG---SIEFAWVKAHVGIVGNEAADTAAKRAAKLHKAPDYTQFP 328
Query: 397 VQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRL 456
+ ++ T H W+ S+ + ++L TI K L T +
Sbjct: 329 ITFIKHYTRSLHASVWQSRYESEPQGQHT-KQHLPTIKH----IIKLHSLAHNTFTLTQT 383
Query: 457 RSNHAICQAYLHKINIAPTNLCQ-ECLEREDMAHIILCCPKYQVTLAIALVGSGQDARLV 515
+ HA + YLH++ + +C + + M H++ CP++ + D +++
Sbjct: 384 LTGHAYTKQYLHRVKVTENAVCPCDGTTVQSMGHVLEDCPRF--------IAPRSDHQII 435
Query: 516 NGGRGFDP 523
G P
Sbjct: 436 CSHAGVSP 443
>gi|111610050|gb|ABH11541.1| reverse transcriptase [Phengaris alcon]
Length = 135
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 36 ESLNTAGKNDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAY 95
+ LNT DN I+P EQ+GC +G+ GCK+ L++D I KK +KNL A+ID KA+
Sbjct: 13 QKLNTHI-TDNKIIPEEQKGCAKGSMGCKEQLIIDAQIHNQTKKDHKNLYHAYIDYQKAF 71
Query: 96 DNCPHEWMVKVIQMYKIDLKSATFCVFCVFHGRRLVIVMSDFNNSDGEDITMSGDCPRDK 155
D+ PH W++ V+++YKI F + + H + + N T+S + K
Sbjct: 72 DSVPHSWVIHVLKIYKIHNSLIPFLQY-IMHNWSTKLNLRTVNT------TVSTSPIKIK 124
Query: 156 RGI 158
RGI
Sbjct: 125 RGI 127
>gi|111610042|gb|ABH11537.1| reverse transcriptase [Phengaris alcon]
gi|111610044|gb|ABH11538.1| reverse transcriptase [Phengaris alcon]
gi|111610046|gb|ABH11539.1| reverse transcriptase [Phengaris alcon]
Length = 135
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 36 ESLNTAGKNDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAY 95
+ LNT DN I+P EQ+GC +G+ GCK L++D I KK +KNL A+ID KA+
Sbjct: 13 QKLNTHI-TDNKIIPEEQKGCAKGSMGCKQQLIIDAQIHNQTKKDHKNLYYAYIDYQKAF 71
Query: 96 DNCPHEWMVKVIQMYKI 112
D+ PH W++ V+++YKI
Sbjct: 72 DSVPHSWLIHVLKIYKI 88
>gi|111610040|gb|ABH11536.1| reverse transcriptase [Phengaris nausithous]
Length = 137
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 36 ESLNTAGKNDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAY 95
+ LNT DN I+P EQ+GC +G+ GCK+ L++D I KK +KNL A+ID KA+
Sbjct: 13 QKLNTHI-TDNKIIPEEQKGCAKGSMGCKEQLIIDAQIHNQTKKDHKNLYYAYIDYQKAF 71
Query: 96 DNCPHEWMVKVIQMYKI 112
D+ PH W++ V+++YKI
Sbjct: 72 DSVPHSWLIHVLKIYKI 88
>gi|427798889|gb|JAA64896.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1199
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
+IFTAEA+AIL A+K++ +K + +I TDS S ++ LK T K + NP +++ ++ L
Sbjct: 994 TSIFTAEAYAILAAVKHIRELKLQKAVIYTDSLSVVKALK-TLKKHRNP--VLVSLYSLL 1050
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHE 409
+ V WV GH I GN D+LA +A + A IP D++ +
Sbjct: 1051 CTIYTSKQHVVVCWVPGHREIQGNVMADQLAV-SAHDSSANTSIAIPALDLKPYLKRKIR 1109
Query: 410 IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL---RKFIVTFNRLRSNHA-ICQA 465
W+ Q +NK L I KP P+ R VT RLR+ H A
Sbjct: 1110 AYWQSTWDRQTHNK------LHVI---KPQLGHWPPISKSRYTEVTLTRLRTGHTHSTHA 1160
Query: 466 YLHKINIAPTNLCQECLEREDMAHIILCC 494
YL AP C +C E + HI++ C
Sbjct: 1161 YLLSGGDAP--FCDKCGEPLTVIHILIQC 1187
>gi|111610028|gb|ABH11530.1| reverse transcriptase [Phengaris teleius]
Length = 135
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 36 ESLNTAGKNDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAY 95
+ LNT DN I+P EQ+GC +G+ GCK+ L++D I KK +KNL +ID KA+
Sbjct: 13 QKLNTHI-TDNKIIPEEQKGCAKGSMGCKEQLIIDAQIHNQTKKDHKNLYYVYIDYQKAF 71
Query: 96 DNCPHEWMVKVIQMYKI 112
D+ PH W++ V+++YKI
Sbjct: 72 DSVPHSWLIHVLKIYKI 88
>gi|427781821|gb|JAA56362.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1134
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 32/231 (13%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTS 332
IF +Q S + +L ++ IF AE A++ AL+ + V I+TDS S L +
Sbjct: 864 IFSSQLDWSFSVRLPDYTQIFLAEFLAVILALRKLP-FSITSVAIVTDSLSLCSALITPT 922
Query: 333 KSNGNPSHLILDIFKAL--SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
+S+ IL + + L HL+ ++R IWV GH GI NE D LAK + G
Sbjct: 923 ESH------ILRLLRLLVPHHLR----NLRLIWVPGHRGIVLNEVADTLAKASLAG---- 968
Query: 391 NPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKK----PWFAKAIPL 446
PV + VT ++R +S + +L +I+D + PW K
Sbjct: 969 -----PVLALLPVTAFVAAARFRTYALS------VLTPSLASISDFQHLQFPWSRKWCGT 1017
Query: 447 RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
R V RLR Y+H+ +A + C C E E + H +L C ++
Sbjct: 1018 RATEVVMTRLRCRIPNLNFYMHRAGLAVSPSCSICGEAETIEHFLLNCRRF 1068
>gi|427798873|gb|JAA64888.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1158
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 32/231 (13%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTS 332
IF +Q S + +L ++ IF AE A++ AL+ + V I+TDS S L +
Sbjct: 944 IFSSQLDWSFSVRLPDYTQIFLAEFLAVILALRKLP-FSITSVAIVTDSLSLCSALITPT 1002
Query: 333 KSNGNPSHLILDIFKAL--SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
+S+ IL + + L HL+ ++R IWV GH GI NE D LAK + G
Sbjct: 1003 ESH------ILRLLRLLVPHHLR----NLRLIWVPGHRGIVLNEVADTLAKASLAG---- 1048
Query: 391 NPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKK----PWFAKAIPL 446
PV + VT ++R +S + +L +I+D + PW K
Sbjct: 1049 -----PVLALLPVTAFVAAARFRTYALS------VLTPSLASISDFQHLQFPWSRKWCGT 1097
Query: 447 RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
R V RLR Y+H+ +A + C C E E + H +L C ++
Sbjct: 1098 RATEVVMTRLRCRIPNLNFYMHRAGLAVSPSCSICGEAETIEHFLLNCRRF 1148
>gi|427791063|gb|JAA60983.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1035
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 286 LKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDI 345
L +IFTAEA+AI A+K++ +K +I TDS S ++ LK T K + NP ++ +
Sbjct: 824 LHQNTSIFTAEAYAIFVAVKHIEQLKLPSAVIYTDSLSVVKALK-TLKKHKNP--VLASL 880
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTD 405
+ L + V WV GH I GN D+LA +A A IP D++ +
Sbjct: 881 YSLLCTVYALKQHVVVCWVPGHREIQGNVLADQLA-ASAHENAAHTFLAIPALDLKPLLK 939
Query: 406 MQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA-ICQ 464
+ W+ +Q NK L I + + A R+ +T RLR+ H
Sbjct: 940 RKLRAYWQSIWDTQTQNK------LHAIKPQLGEWPPASKSRRTEITLTRLRTGHTHTTH 993
Query: 465 AYLHKINIAPTNLCQECLEREDMAHIILCC 494
AYL N P C+ C E + HI++ C
Sbjct: 994 AYLLSGNDPPR--CERCGEPLTVLHILIQC 1021
>gi|427798885|gb|JAA64894.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1199
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
+IFTAEA+AIL A+K++ +K + +I TDS S ++ LK K + +++ ++ +
Sbjct: 994 TSIFTAEAYAILAAVKHIRELKLQKAVIYTDSLSVVKALKTLKKHKNS---ILVSLYSLV 1050
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHE 409
L V WV GH I GN D LA T A IP D++ + +
Sbjct: 1051 CTLYTAKQHVVVCWVPGHREIQGNVMADHLAAST-HDCSANTSIAIPALDLKPLLKRKLR 1109
Query: 410 IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL---RKFIVTFNRLRSNHA-ICQA 465
W+ Q +NK L I KP P+ R VT RLR+ H A
Sbjct: 1110 AYWQSTWDQQTHNK------LHVI---KPQLGHWPPISKSRYTEVTLTRLRTGHTHSTHA 1160
Query: 466 YLHKINIAPTNLCQECLEREDMAHIILCC 494
YL AP C +C E + HI++ C
Sbjct: 1161 YLLSGGDAP--FCDKCGEPLTVIHILIQC 1187
>gi|427798001|gb|JAA64452.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1259
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 12/213 (5%)
Query: 288 NFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFK 347
+ T AE A+ AL+++S + + I +DSK+ L+ L + + G L+ +I +
Sbjct: 1005 HLTTSTGAELTALRAALQFISDERAQKWTIFSDSKAALQSLLSPLR-RGPHEQLVFEIAE 1063
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQ 407
HL E + F W+ H GI GNE DR A+ N IP+ A ++
Sbjct: 1064 ETHHLTEKGHELAFQWLPSHCGIIGNERADRAARSAHTEN---NEILIPLSRTDAARKLR 1120
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP--LRKFIVTFN-RLRSNHAICQ 464
+ R+ SQ N + L+T+ P + IP LR+ T RL A
Sbjct: 1121 --MLARQRTTSQWNEPHFKHARLYTL---DPTLSLQIPPGLRRGDATLLCRLWLGVAFTN 1175
Query: 465 AYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
AY +I +A T C C E + HI+ CP+Y
Sbjct: 1176 AYAFRIGMADTAACYHCGSDETIQHILCECPQY 1208
>gi|427797513|gb|JAA64208.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1216
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTS 332
IF Q S +L +F I+ AE AI AL+ +SS ++++ III+D+ S L +
Sbjct: 956 IFSHQLNWSFALRLPDFTPIYLAEFLAITLALRKLSS-QQSKAIIISDALSVCIHLTSAK 1014
Query: 333 KSNGNPSHLILDIFKAL--SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
+S +L IF +L L E VRF+WV GHAGIA NE D LA + +L
Sbjct: 1015 QSP------LLRIFWSLVPRSLSE----VRFLWVPGHAGIALNETADSLA------SASL 1058
Query: 391 NPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFI 450
N PV V +++ ++ + N L + F + W R+
Sbjct: 1059 N---FPVVLVAPQFSFITAERFKRLLILKINETSLLHSEEFRHL-QFTWNTTKCLSRQCE 1114
Query: 451 VTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
VT R YLHK + TNLC C E E + H +L C ++
Sbjct: 1115 VTLTSFRCRVPRLNYYLHKSGFSLTNLCAICNEPETIDHFLLTCRRF 1161
>gi|427778603|gb|JAA54753.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1397
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 286 LKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDI 345
L +IFTAEA+ IL ++++ II TDS S + L + K + NP +
Sbjct: 1137 LHAHTSIFTAEAYGILLIVEHIKQHMIRRSIIYTDSLSVVTAL-SCGKCSKNP------V 1189
Query: 346 F-KALSHLQE---WNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
F K L+++ E N+S+ WV GHAGI GNE VD+ A+E A ++ +P D+
Sbjct: 1190 FNKLLNNMHEAYNQNLSIVLCWVPGHAGITGNEMVDKNAREAA-SRHTIDISSVPGVDLN 1248
Query: 402 AVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP--LRKFI-VTFNRLRS 458
V W+ Q +NK + KP +K +P L +F VT RLR
Sbjct: 1249 PVVRRGLRSHWQVEWDKQVDNK---------LHLVKPHLSKVLPQKLNRFTEVTLARLRI 1299
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
H + H + C C E + H+++ CP
Sbjct: 1300 GHTYA-THKHLLTGTDPPTCIHCGETLTILHVLIECP 1335
>gi|427798887|gb|JAA64895.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1199
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
+IFTAEA+AIL A+K++ +K + +I TDS S ++ LK K + +++ ++ +
Sbjct: 994 TSIFTAEAYAILAAVKHIRELKLQKAVIYTDSLSVVKALKTLKKHKNS---ILVSLYSLV 1050
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHE 409
+ V WV GH I GN D LA T A IP D++ + +
Sbjct: 1051 CTVYTAKQHVVVCWVPGHREIQGNVMADHLAAST-HDCSANTSIAIPALDLKPLLKRKLR 1109
Query: 410 IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL---RKFIVTFNRLRSNHA-ICQA 465
W+ Q +NK L I KP P+ R VT RLR+ H A
Sbjct: 1110 AYWQSTWDQQTHNK------LHVI---KPQLGHWPPISKSRYTEVTLTRLRTGHTHSTHA 1160
Query: 466 YLHKINIAPTNLCQECLEREDMAHIILCC 494
YL AP C +C E + HI++ C
Sbjct: 1161 YLLSGGDAP--FCDKCGEPLTVIHILIQC 1187
>gi|154276412|ref|XP_001539051.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414124|gb|EDN09489.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 377
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 291 TIFTAEAFAILQALKYVSSIKENE----------VIIITDSKSCLEKLKNTSKSNGNPSH 340
T+ TAE AI L V +E I++DS++ L + N SK G
Sbjct: 105 TVTTAELLAIYHGLYLVWRSHSSEGTPPPHQRHTYTILSDSRTALRAIANASKQVG--GQ 162
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP-----YPI 395
+I +I L+ + + WV GH+GI GNE D+LAK++ +NP +P
Sbjct: 163 IIQNILHTTKELRSIGVDLCLQWVPGHSGIKGNEMADQLAKQS------INPNPTHGFPK 216
Query: 396 PVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP---LRKFIVT 452
P +R + +WR+ S KG + + A+P R+ T
Sbjct: 217 PASHLREASRNSTTQEWRDEWSS--TAKGTHLRKIDA----------ALPGRHARRLYAT 264
Query: 453 FNR--------LRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
R LR+ H+ + ++I A N C EC +E + H+++ CP+ Q
Sbjct: 265 LPRPRARLLAQLRTGHSWLNEFRNRIKYADDNKC-ECGAKESVHHVLVDCPRLQ 317
>gi|154278122|ref|XP_001539883.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413468|gb|EDN08851.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 765
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 101/234 (43%), Gaps = 47/234 (20%)
Query: 291 TIFTAEAFAILQALKYV----------SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
T+ TAE AI L V + + + I++DS++ L + N+SK G
Sbjct: 493 TVTTAELLAIYHGLYLVWRSHSSEGTPTPHQRHTYTILSDSRTALRAIANSSKQVGG--Q 550
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP-----YPI 395
++ +I L+ + + WV GH+GI GNE D+LAK++ +NP +P
Sbjct: 551 IVQNILHTTKELRSIGVDLCLQWVPGHSGIKGNEMADQLAKQS------INPNPTRGFPK 604
Query: 396 PVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP---LRKFIVT 452
P +R + +WR+ S KG + + A+P R+ T
Sbjct: 605 PASHLREASRNSTTQEWRDEWSS--TAKGTHLRKI----------DAALPGQHTRRLYAT 652
Query: 453 FNR--------LRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
R LR+ H+ + ++I A N C EC +E + H+++ CP+ Q
Sbjct: 653 LPRPRARLLAQLRTGHSWLNEFRNRIKYADDNKC-ECGAKESVHHVLVDCPRLQ 705
>gi|357615610|gb|EHJ69750.1| putative pol-like protein [Danaus plexippus]
Length = 168
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMS 418
V+ WV H GI GNE D+ + A + N P D M + ++E +
Sbjct: 12 VQLQWVPSHNGIIGNELADQATRGRADENHS-NSLKTPYTDFHHTFTMALKSLYKEYWKT 70
Query: 419 QNNNKGLFYKNLFTITDKKPWFAKAIPL-RKFIVTFNRLRSNHAICQAYLHKINIAPTNL 477
+ KG +Y N+ +PW+ K RKFIVT NRLR H ++L+K+ +
Sbjct: 71 VSKEKGTWYANIQRAPPAQPWYNKLKQYNRKFIVTINRLRFGHCRTPSHLYKLQLVQNPT 130
Query: 478 CQECL-EREDMAHIILCCPKYQVTLAIAL 505
C EC + D+ HI+ CP Y++ I +
Sbjct: 131 CPECQHDLADLQHIVFQCPAYRIHRLILV 159
>gi|154284203|ref|XP_001542897.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411077|gb|EDN06465.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1672
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 37/229 (16%)
Query: 291 TIFTAEAFAILQALKYVSSIKENE----------VIIITDSKSCLEKLKNTSKSNGNPSH 340
T+ TAE AI L V +E I++DS++ L + N SK G
Sbjct: 1400 TVTTAELLAIYHGLYLVWRSHSSEGTPPPHQRHTYTILSDSRTALRAIANASKQVGG--Q 1457
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
+I +I L+ + + WV GH+GI GNE D+LAK++ + + +P P +
Sbjct: 1458 IIQNILHTTKELRSIGVDLCLQWVPGHSGIKGNEMADQLAKQSI-NPNPTHGFPKPASHL 1516
Query: 401 RAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP---LRKFIVTFNR-- 455
R + +WR+ S KG + + A+P R+ T R
Sbjct: 1517 REASRNSTTQEWRDEWSS--TAKGTHLRKI----------DAALPGRHARRLYATLPRPR 1564
Query: 456 ------LRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
LR+ H+ + ++I A N C EC +E + H+++ CP+ Q
Sbjct: 1565 ARLLAQLRTGHSWLNEFRNRIKYADDNKC-ECGAKESVHHVLVDCPRLQ 1612
>gi|427796097|gb|JAA63500.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1225
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
S +F++ +F IF AE A++ AL+ +++ N +IITDS S L +
Sbjct: 973 SFSFRIPDFTPIFMAEFLAVVLALRKLTT-SINSAVIITDSLSVCSALTASGSK------ 1025
Query: 341 LILDIFKAL--SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQ 398
L+ FK+L HL VR +WV GH G+ NE D LAK G A+N P
Sbjct: 1026 -FLNQFKSLVPDHLTH----VRLVWVPGHRGLFINETADALAKAALDG-PAINISPTSAF 1079
Query: 399 DVRAVTDMQHEIQWRE-NVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLR 457
V A + ++ RE ++ S N+ + +L T PW + + R V RLR
Sbjct: 1080 IVAA--RFRRQMMMREFDIPSLKNSPD--FNHLST-----PWKSTSCHNRGLEVIITRLR 1130
Query: 458 SNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVTLAIAL 505
YL++ + P+ LC C E E + H ++ C K+ I+L
Sbjct: 1131 CRIPSLNFYLYRAGLVPSPLCSYCREEETIEHFLISCGKFSALRKISL 1178
>gi|111610036|gb|ABH11534.1| reverse transcriptase [Phengaris nausithous]
Length = 135
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 45 DNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMV 104
DN I+P EQ+GC +G+ GCK+ L++D I K +KNL A+ID KA+D+ P+ W++
Sbjct: 21 DNKIVPEEQKGCAKGSMGCKEQLIIDAQIHNQTTKDHKNLYYAYIDYQKAFDSVPNSWLI 80
Query: 105 KVIQMYKI 112
V+++Y+I
Sbjct: 81 HVLKIYEI 88
>gi|459694|gb|AAA92147.1| reverse transcriptase [Bombyx mori]
Length = 671
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVK 105
NNIL EQ+GC G GCK+ L++D I + K +NL +ID KA+D+ PH W+++
Sbjct: 536 NNILAEEQKGCRRGHMGCKEQLIIDSTIMKHATTKNRNLHCTYIDYKKAFDSIPHSWLIQ 595
Query: 106 VIQMYKIDLKSATFCVFCVFH 126
V+++YKI+ +F + H
Sbjct: 596 VLEIYKINPIIISFLRNIMTH 616
>gi|111610030|gb|ABH11531.1| reverse transcriptase [Phengaris teleius]
Length = 135
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 36 ESLNTAGKNDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAY 95
+ LNT DN I+P EQ+GC +G+ GCK+ L++D I KK +KNL A+I KA+
Sbjct: 13 QKLNTHI-TDNKIIPEEQKGCAKGSMGCKEQLIIDAQIHNQTKKDHKNLYYAYIHYQKAF 71
Query: 96 DNCPHEWMVKVIQMYKI 112
D+ H W++ V+++YKI
Sbjct: 72 DSVLHSWLIDVLKIYKI 88
>gi|34392535|dbj|BAC82595.1| reverse transcriptase [Anopheles gambiae]
Length = 1209
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 44 NDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWM 103
+ NN++ EQ G + GCKD +++D +I KK +NL +A+ID KAYD+ PH ++
Sbjct: 560 DTNNVMTEEQTGRRKNTQGCKDQVIIDAVIVGQAAKKQRNLDMAYIDYKKAYDSVPHSYL 619
Query: 104 VKVIQMYKID 113
+KV+Q+YK+D
Sbjct: 620 LKVLQLYKVD 629
>gi|427798837|gb|JAA64870.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1174
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 288 NFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFK 347
+ T AE A+ AL+++S + + I +DSK+ L+ L + + G L+ +I +
Sbjct: 966 HLTTSTGAELTALRAALQFISDERAQKWTIFSDSKAALQSLLSPLR-RGPHEQLVFEIAE 1024
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQ 407
HL E + F W+ H GI GNE DR A+ N IP+ A ++
Sbjct: 1025 ETHHLTEKGHELAFQWLPSHCGIIGNERADRAARSAHTEN---NEILIPLSRTDAARKLR 1081
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP--LRKFIVTFN-RLRSNHAICQ 464
+ R+ SQ N + L+T+ P + IP LR+ T RL + A +
Sbjct: 1082 --MLARQRTTSQWNEPHFKHARLYTL---DPTLSLQIPPGLRRGDATLLCRLWLDVAFTK 1136
Query: 465 AYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
AY +I +A T C C + + HI+ P+Y
Sbjct: 1137 AYAFRIGMADTAACYHCGSDDTIQHILCESPQY 1169
>gi|443693558|gb|ELT94903.1| hypothetical protein CAPTEDRAFT_189741, partial [Capitella teleta]
Length = 502
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIK-ENEVIIITDSKSCLEKLKNTSKSNGNPSH-L 341
F L +I+TAE AI QAL ++ ++K E++ I +DS S L T+ SN + +H
Sbjct: 108 FGLPTQMSIYTAELIAIEQALIFIETVKDEDQFNICSDSLSSL-----TALSNCDITHPY 162
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
+L I ++L V FIW H GI GNE DRLAK+ + P+P D +
Sbjct: 163 LLSILTKQNNLVRKGKLVVFIWCPSHVGILGNEVADRLAKQAL--VMPVTKLPLPHTDYK 220
Query: 402 AVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+ + W+ + +NK + + + + P R+ + R R H+
Sbjct: 221 SPIRSYVKSLWQNEWDEETDNKLHSIQPVISEWKQGPQID-----RRGEIVLARARIGHS 275
Query: 462 -ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVTLAIALVG------------- 507
+ YL + +AP C C + HI++ C ++++L G
Sbjct: 276 HLTHGYLLRREVAP--FCIPCQSLLTVKHILIDCIDFKMSLTYLQYGPFSSFAPVFDSSA 333
Query: 508 ---SGQDARLVNGGRG 520
S +D+RL+N G
Sbjct: 334 ANLSEEDSRLLNSTYG 349
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 195 DKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTAEAFAILQALKYASS 254
DK+P I+TDGSK++ +VA AF T + F L +I+TAE AI QAL + +
Sbjct: 77 DKYPGIN-IYTDGSKSNNAVACAF--TCSTYQIQFGLPTQMSIYTAELIAIEQALIFIET 133
Query: 255 IKEKE 259
+K+++
Sbjct: 134 VKDED 138
>gi|154272351|ref|XP_001537028.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409015|gb|EDN04471.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1753
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 16/227 (7%)
Query: 279 KNSGTFKLKNFATIFTAEAFAILQALKYVSSIK-----ENEVIIITDSKSCLEKLKNTSK 333
K + + + +T+++AE ++ AL+ V I + I TD+++ ++ ++N
Sbjct: 1475 KRTQYMGVSSTSTVYSAELKGLVLALQMVIDIHATGTAPGKCAIFTDNQAAVQAVRNPKN 1534
Query: 334 SNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN-- 391
S+G +++++ + L L++ V+F W+ H G+ GNE DRLAK A ALN
Sbjct: 1535 SSGQ--YILVEAIQVLDRLRDLGWEVQFHWIPAHVGVPGNEEADRLAKRAA--DPALNTE 1590
Query: 392 -PYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL---R 447
P P ++ + A T Q + + KG ++LF + + + R
Sbjct: 1591 QPEPDLIRTLLATTKSTIR-QAMKGEWETSWEKGKHGRDLFRLGARPGKVTLNTHMGTHR 1649
Query: 448 KFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
++R+ +AYLH IN A T+ CQ + + HI+L C
Sbjct: 1650 AISSAITQMRTGKIGLRAYLHDINKADTDKCQCGYGPQTVRHILLEC 1696
>gi|427791807|gb|JAA61355.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1212
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 17/230 (7%)
Query: 268 RESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEK 327
R+ + I +++ + ++ +IFTAE +A+ +A + + + K + II TDS S L+
Sbjct: 950 RDHVGIGIVTGESAFSVRVPQCISIFTAEVYALYEAARKIIAGKHKKAIIYTDSLSALKA 1009
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
L KS P L+ DI + + IS+RF WV H GI GNE D+ A A T
Sbjct: 1010 LH--IKSECEP--LVGDILNMVL-INSKVISMRFCWVPSHVGIPGNEKADKCASLAAHKT 1064
Query: 388 DALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLR 447
L IP++D + + +W++ S +NK K T+ + K +
Sbjct: 1065 --LTKIRIPLKDSQRTIRLALLAKWQQQWDSCTSNKLHLVKP--TLGEWKNCRHQ----E 1116
Query: 448 KFI-VTFNRLRSNHA-ICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
+FI V RLR H + +L P +C++C E + HI++ CP
Sbjct: 1117 RFIEVILCRLRIGHTHLTHNFLLTKEEQP--MCEKCQEPLTLIHILILCP 1164
>gi|427792011|gb|JAA61457.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1121
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
+L +IFTAEA+AIL A+KY+ + + +I TDS S + L +T K N NP ++ D
Sbjct: 985 RLNVHTSIFTAEAYAILIAIKYILNHNITKSVIFTDSLSVVRAL-HTGKPNKNP--VLCD 1041
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVT 404
+ K L++ + WV GHAGI GNE D A A+ ++ L+ +P QD++A+
Sbjct: 1042 VEKQLTNAYRNTSEITVCWVPGHAGIDGNERADACAAVAAQKSN-LDVNSVPYQDLKALV 1100
Query: 405 DMQHEIQWRENVMSQNNNK 423
+W++ + NNK
Sbjct: 1101 HRNLRERWQKEWDLETNNK 1119
>gi|154276646|ref|XP_001539168.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414241|gb|EDN09606.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1913
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 14/215 (6%)
Query: 290 ATIFTAEAFAILQALKYVSSIK-----ENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
+T+++AE ++ AL+ V I + I TD+++ ++ ++N S+G +++++
Sbjct: 1646 STVYSAELKGLVLALQMVIDIHATGTAPGKCAIFTDNQAAVQAVRNPKHSSGQ--YILVE 1703
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT-DALNPYPIPVQDVRAV 403
+ L L++ V+F W+ H G+ GNE DRLAK A T + P P ++ + A
Sbjct: 1704 AIQVLDRLRDLGWEVQFHWIPAHVGVPGNEEADRLAKRAADPTLNTEQPEPDLIRTLLAS 1763
Query: 404 TD----MQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSN 459
T + +W + + + LF L K R ++R+
Sbjct: 1764 TKSTIRQAMKGEWETSWEKGKHGRDLF--RLGARPGKATLNTHMGTHRAISSVITQMRTG 1821
Query: 460 HAICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
+AYLH IN A T+ CQ + + HI+L C
Sbjct: 1822 KIGLRAYLHDINKADTDKCQCGYGPQTVRHILLEC 1856
>gi|154274221|ref|XP_001537962.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415570|gb|EDN10923.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1671
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 32/215 (14%)
Query: 292 IFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSH 351
+ TAE AI L Y+ + I++DS++ L + N+SK G ++ +I
Sbjct: 1415 VTTAELLAIYHGL-YL----RHTYTILSDSRAALRAIANSSKQVGG--QIVQNILHTTKQ 1467
Query: 352 LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQ 411
L+ + + WV GH+GI GNE D+LAK++ + + +P P +R + +
Sbjct: 1468 LKSIGVDLCLQWVPGHSGIKGNEMADQLAKQSI-NPNPTHGFPKPASHLREASRNSTTQE 1526
Query: 412 WRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP---LRKFIVTFNR--------LRSNH 460
WR+ S KG + + A+P R+ T R LR+ H
Sbjct: 1527 WRDEWSS--TAKGTHLRKI----------DAALPGQHTRRLYATLPRPRARLLAQLRTGH 1574
Query: 461 AICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
+ Y ++I N C EC +E + H+++ CP
Sbjct: 1575 SWLNEYRNRIKYTDDNKC-ECGAKESVHHVLVDCP 1608
>gi|427791321|gb|JAA61112.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1210
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 291 TIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+IFTAE +A+ +A + + + K + II TDS S L+ L KS P L+ DI +
Sbjct: 970 SIFTAEVYALYEAARKIIAGKHKKAIIYTDSLSALKALH--IKSECEP--LVGDILNMVL 1025
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEI 410
+ IS+RF WV H GI GNE D+ A A T L IP++D + +
Sbjct: 1026 -INSKVISMRFCWVPSHVGIPGNEKADKCASLAAHKT--LTKIRIPLKDSQRTIRLALLA 1082
Query: 411 QWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFI-VTFNRLRSNHA-ICQAYLH 468
+W++ S +NK K T+ + K + +FI V RLR H + +L
Sbjct: 1083 KWQQQWDSCTSNKLHLVKP--TLGEWKNCRHQ----ERFIEVILCRLRIGHTHLTHNFLL 1136
Query: 469 KINIAPTNLCQECLEREDMAHIILCCP 495
P +C++C E + HI++ CP
Sbjct: 1137 TKEEQP--MCEKCQEPLTLIHILILCP 1161
>gi|427779469|gb|JAA55186.1| Putative tick transposon [Rhipicephalus pulchellus]
gi|427782053|gb|JAA56478.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Query: 283 TFKLK--NFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
T +LK + T AE A+ AL+Y+ S + + + +DSK L+ +++ + G
Sbjct: 191 TLRLKTSHVTTSTAAELTALRCALEYIDSERPSRWAVFSDSKPALQCVRSVLR-RGCHEQ 249
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
L +I + ++E V F W+ GH GI+GN + D A+ + + PIP+
Sbjct: 250 LTYEIVRLHHRVKEKGHEVDFQWIPGHCGISGNVSADNAARTSHEQETTV---PIPLSRT 306
Query: 401 RAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNH 460
A + ++H R +++ N + + L I A R+ RL
Sbjct: 307 DAASQLRHLA--RSLCLAEWNTPSIRHTRLHQINPTLELRPPAGLHRREASLLCRLWLGV 364
Query: 461 AICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
A +AY I + +++C+ C ED+ H++ CP++
Sbjct: 365 AFTKAYTTLIGVTDSSVCEVCGTEEDIDHLLCRCPRF 401
>gi|242825388|ref|XP_002488430.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712248|gb|EED11674.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1977
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++L++T G L+L KA
Sbjct: 1688 VFDAELVGVATALEWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQ--ALVLRAHKAAE 1745
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 1746 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEDLSLAHVRRACTEARRA 1805
Query: 410 I--QW-RENVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W R N + + G YK NL + K P ++ + +L++ HA
Sbjct: 1806 AVSEWARINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRLASRYYQLKTGHA 1857
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YLH+I + CQ C E E + H++ C
Sbjct: 1858 PIGTYLHRIGRRESPECQACKEPHETVRHVLFEC 1891
>gi|427782051|gb|JAA56477.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 8/217 (3%)
Query: 283 TFKLK--NFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
T +LK + T AE A+ AL+Y+ S + + + +DSK L+ +++ + G
Sbjct: 191 TLRLKTSHVTTSTAAELTALRCALEYIDSERPSRWAVFSDSKPALQCVRSVLR-RGCHEQ 249
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
L +I + ++E V F W+ GH GI+GN + D A+ + + PIP+
Sbjct: 250 LTYEIVRLHHRVKEKGHEVDFQWIPGHCGISGNVSADNAARTSHEQETTV---PIPLSRT 306
Query: 401 RAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNH 460
A + ++H R +++ N + + L I A R+ RL
Sbjct: 307 DAASQLRHLA--RSLCLAEWNTPSIRHTRLHQINPTLELRPPAGLHRREASLLCRLWLGV 364
Query: 461 AICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
A +AY I + + +C+ C ED+ H++ CP++
Sbjct: 365 AFTKAYTTLIGVTDSAVCEACGTEEDIDHLLCRCPRF 401
>gi|242807803|ref|XP_002485032.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218715657|gb|EED15079.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 550
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++LK+ G L+L +A+
Sbjct: 231 VFDAELMGVATALEWALERQPLGPIWVLLDAQNAIDRLKSARPGPGQ--ALVLRAHRAVE 288
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+G+ GNE D+ AK A A + + V RA T+ +
Sbjct: 289 KLAMRGQPVTIQWVPGHSGVVGNEQADQAAKRAASKQTAPGFEHLSLAYVRRACTEARRA 348
Query: 410 I--QW-RENVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W R N + + G YK NL + K P ++ + +L++ HA
Sbjct: 349 AVSEWARINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRLASRYYQLKTGHA 400
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YLH+I + CQ C E E + H++ C
Sbjct: 401 PIGTYLHRIGRRESPECQACKEPHETVRHVLFEC 434
>gi|242827513|ref|XP_002488845.1| transposon I factor, putative [Talaromyces stipitatus ATCC 10500]
gi|218712006|gb|EED11435.1| transposon I factor, putative [Talaromyces stipitatus ATCC 10500]
Length = 1139
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 291 TIFTAEAFAILQAL----------KYVSSIKENEVI-IITDSKSCLEKLKNTSKSNGNPS 339
+I TAE I A+ K S E+I I++DSKS L+ ++N S +G
Sbjct: 854 SIHTAELIGIFYAISLAFRLSHQNKQPSRPGTGEMITILSDSKSALQAIRNPSNKSGQ-- 911
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD 399
+I I ++ L IS+R W+ GH GN+A D LAK TA G D +P+ PV
Sbjct: 912 RVIQAINQSAYELDSRGISLRLQWIPGHCDDPGNDAADHLAK-TAVGLDKTHPFCRPVSR 970
Query: 400 VRAVTDMQHEIQWRENVMSQNNNKGL--FYKNLFTITDKKPWFAKAIPL-RKFIVTFNRL 456
+A Q +W + + L L +I ++ +++P R +++T +L
Sbjct: 971 EKAAIRKQILKEWEDEWKASRKGAHLRRIDSTLPSIHTRR--LYQSLPRNRAYLLT--QL 1026
Query: 457 RSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPK 496
R+ H+ + + + C EC +E + H+++ CP+
Sbjct: 1027 RTGHSWLATHGKFLQFREDDTC-ECGAKETVTHVLIDCPR 1065
>gi|67537820|ref|XP_662684.1| hypothetical protein AN5080.2 [Aspergillus nidulans FGSC A4]
gi|40740985|gb|EAA60175.1| hypothetical protein AN5080.2 [Aspergillus nidulans FGSC A4]
Length = 804
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 10/213 (4%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
+T++ AE IL AL + + +I TD+++ L+ L+N +G +++ I AL
Sbjct: 219 STVYVAELQGILLALVIILQRQMQHAVIFTDNQATLQALRNPGSQSGQ--YILEAIIMAL 276
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHE 409
+ ++ ++V F W+ H G+ GNE DR AKE A G + + + AV HE
Sbjct: 277 NKGRKAGLNVHFRWIPAHRGVEGNEQADRRAKE-ATGWRRIRGHRGRMTIRSAVKRRAHE 335
Query: 410 I---QWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAY 466
+ +W + S ++ + L+ L +K R ++R+ + Y
Sbjct: 336 VVNARWENDWKSCHHGRELY--ELTPTPTRKVLRVHQDLHRALSTIIVQMRTGKIGLRHY 393
Query: 467 LHKINI--APTNLCQECLEREDMAHIILCCPKY 497
L++ + P + CQ + + HI+L CP +
Sbjct: 394 LYQRGVPDVPNSDCQCGRATQSVRHILLACPTF 426
>gi|427798839|gb|JAA64871.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1220
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 12/217 (5%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
FK + T AE A+ AL +++ + + I +DSK+ L+ L + + G L+
Sbjct: 962 FKTSHLTTSTAAELAALRVALDFITDERAQKWAIFSDSKAALQSLLSPLR-RGLHEQLVF 1020
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAV 403
+I + L E + F W+ H GI GNE D+ A+ + + IP+ A
Sbjct: 1021 EITEETHRLIEKGHQITFQWLPSHCGIIGNERADQAARSAHTESSQIL---IPLSRTDAA 1077
Query: 404 TDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP--LRKFIVTFN-RLRSNH 460
++ + R+ +SQ N L+++ P + IP LR+ T RL
Sbjct: 1078 WKLR--VLARQCTVSQWNEPHFKNARLYSL---DPTLSLRIPPGLRRGDATLLCRLWLGV 1132
Query: 461 AICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
A AY +I +A T C C E + HI+ CP+Y
Sbjct: 1133 AFTHAYAFRIGMADTAACDHCSGDETIQHILCECPQY 1169
>gi|242794525|ref|XP_002482393.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218718981|gb|EED18401.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 523
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + + ++ D+++ +++L++T G L+L +A+
Sbjct: 234 VFDAELVGVATALEWALERQPLDPIWVLLDAQNAIDRLRSTRPGPGQ--ALVLRAHRAVE 291
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+G+ GNE D+ AK A A + + V RA + +
Sbjct: 292 KLAMRGQPVTIQWVPGHSGVVGNEQADQAAKRAASKQTAPGFEHLSLAYVKRACMEARRT 351
Query: 410 I--QW-RENVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W R N + + G YK NL + K P ++ + +L++ HA
Sbjct: 352 AVSEWARINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRLASRYYQLKTGHA 403
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YLH+I + CQ C E E + H++ C
Sbjct: 404 PIGTYLHRIGRRESPECQACKEPHETVRHVLFEC 437
>gi|358376676|dbj|GAA93209.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 378
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 18/254 (7%)
Query: 253 SSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKE 312
+S KE + G V++ + I +Q + G+ + F +++TAE AI A++ + +
Sbjct: 56 TSGKENQLGAAAVALDHNQQIVGSQQVSIGSME---FWSVYTAELMAIYYAIRLGFQLAQ 112
Query: 313 ----------NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFI 362
I++DS S L+ +KN+ +G +I I ++ L+ I ++
Sbjct: 113 KNQRSRATDAEPATILSDSMSALQVIKNSWNKSGQ--RIIQAIHQSAGELRARGIPLQLQ 170
Query: 363 WVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNN 422
WV GH G GNEA DRLAK T G +P+ + + +W + + N
Sbjct: 171 WVPGHCGNPGNEAADRLAKATV-GVKKRHPFRHLLSREKRYIRKNISDEWHQEWRASRNG 229
Query: 423 KGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECL 482
L + ++ ++P R +LR+ H+ + + + C EC
Sbjct: 230 GHLRCIDRALPANRTRRLYGSLP-RNQAYLLTQLRTGHSWLATHGKQRRLRDDEKC-ECG 287
Query: 483 EREDMAHIILCCPK 496
E + H+++ CP+
Sbjct: 288 ATETVVHMLIDCPQ 301
>gi|427784665|gb|JAA57784.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 10/221 (4%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
S K + T AE A+ A+KY+ N+ I DS+S L+ L+ + +G
Sbjct: 191 SMQLKFSHITTSTAAELGALQAAVKYILRQPPNQWAIFCDSRSALQTLQFALR-HGLHEQ 249
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
L+ +I E V F W+ H GIAGN+ D A+ +A D P P+
Sbjct: 250 LVYEIRHDYHQALENGHDVTFQWLPSHCGIAGNDRADEAAR-SAHEKDLQVPIPL----- 303
Query: 401 RAVTDMQHEIQ--WRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRS 458
+ TD ++Q R + Q N +G +++I + R+ R+
Sbjct: 304 -SRTDAARQLQSLARRLTLLQWNTQGFSNSRVYSIYPNLQLRLPSGLSRRDETLLCRMWL 362
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
A AY H I +A + C C E + HI+ CP YQ
Sbjct: 363 GVAFTNAYSHLIGMANSAACNSCGREETIEHILCHCPSYQT 403
>gi|134080425|emb|CAK41174.1| unnamed protein product [Aspergillus niger]
Length = 1288
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 20/255 (7%)
Query: 253 SSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKE 312
+S KE + G V++ + I ++ + G+ + F +++ AE AI A+ V + +
Sbjct: 966 ASGKENQLGAAAVALDHNQRIVGSRQVSIGSME---FWSVYAAELMAIYYAIGLVFQLAQ 1022
Query: 313 ----------NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFI 362
I++DS S L+ +KN+ +G +I I ++ L+ I +R
Sbjct: 1023 KNQRSRATDAEPATILSDSMSALQVIKNSWNKSGQ--RIIQAIHQSAGELRARGIPLRLQ 1080
Query: 363 WVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNN 422
WV GH G GNEA DRLAK T G + +P+ + + +W + + N
Sbjct: 1081 WVPGHCGNPGNEAADRLAKATV-GGEKRHPFRHLLSREKRYIRRNISDEWHQEWRASRNG 1139
Query: 423 KGLFYKNLFTITDKKPWFAKAIPL-RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQEC 481
L + ++ ++P R +++T +LR+ H+ + + + C EC
Sbjct: 1140 GHLRRIDRALPANRTRRLYGSLPRNRAYLLT--QLRTGHSWLATHGKQRGLRDDEKC-EC 1196
Query: 482 LEREDMAHIILCCPK 496
E + H+++ CP+
Sbjct: 1197 GATETVVHVLIDCPR 1211
>gi|259482037|tpe|CBF76131.1| TPA: hypothetical protein ANIA_10625 [Aspergillus nidulans FGSC A4]
Length = 486
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 10/213 (4%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
+T++ AE IL AL + + +I TD+++ L+ L+N +G +++ I AL
Sbjct: 219 STVYVAELQGILLALVIILQRQMQHAVIFTDNQATLQALRNPGSQSGQ--YILEAIIMAL 276
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHE 409
+ ++ ++V F W+ H G+ GNE DR AKE A G + + + AV HE
Sbjct: 277 NKGRKAGLNVHFRWIPAHRGVEGNEQADRRAKE-ATGWRRIRGHRGRMTIRSAVKRRAHE 335
Query: 410 I---QWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAY 466
+ +W + S ++ + L+ L +K R ++R+ + Y
Sbjct: 336 VVNARWENDWKSCHHGRELY--ELTPTPTRKVLRVHQDLHRALSTIIVQMRTGKIGLRHY 393
Query: 467 LHKINI--APTNLCQECLEREDMAHIILCCPKY 497
L++ + P + CQ + + HI+L CP +
Sbjct: 394 LYQRGVPDVPNSDCQCGRATQSVRHILLACPTF 426
>gi|242786282|ref|XP_002480775.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218720922|gb|EED20341.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 882
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++LK+T + G L+L +A+
Sbjct: 593 VFDAELMGVATALEWALERQPLGPIWVLLDAQNAIDRLKSTRPAPGQ--ALVLRAHRAVE 650
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+G+ GNE D+ AK A A + + V RA + +
Sbjct: 651 KLAMRGQPVTIQWVPGHSGVVGNEQADQAAKRAASKQTAPGFEHLSLAYVKRACMEARRA 710
Query: 410 I--QW-RENVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W R N + + G YK NL + K P ++ + +L++ HA
Sbjct: 711 AVSEWARINAVQGRHRDGRVYKMPRGWNLGPVAGKAP--------KRLASRYYQLKTGHA 762
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YLH+I + CQ C E E + H+ C
Sbjct: 763 PIGTYLHRIGRRESPECQACKEPHETVRHVFFEC 796
>gi|443695973|gb|ELT96755.1| hypothetical protein CAPTEDRAFT_23017, partial [Capitella teleta]
Length = 261
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIK-ENEVIIITDSKSCLEKLKNTSKSNGNPSH-L 341
F L +I+TAE AI QAL ++ ++K E++ I +DS S L T+ SN + +H
Sbjct: 62 FGLPAQMSIYTAELIAIEQALIFIETVKDEDQFNICSDSLSSL-----TALSNCDITHPY 116
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
+L I ++L V FIW H GI GNE DRLAK+ + P+P D +
Sbjct: 117 LLSILTKQNNLVRKGKLVVFIWCPSHVGILGNEVADRLAKQAL--VMPVTKLPLPHTDYK 174
Query: 402 AVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+ + W+ + +NK + + + + P R+ + R R H+
Sbjct: 175 SPIRSYVKSLWQNEWDEETDNKLHSIQPVISEWKQGPQID-----RRGEIVLARARIGHS 229
Query: 462 -ICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
+ YL + +AP C C + HI++ C
Sbjct: 230 HLTHGYLLRREVAP--FCIPCQSLLSVKHILIDC 261
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 195 DKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTAEAFAILQALKYASS 254
DK+P I+TDGSK++++VA AF T + F L +I+TAE AI QAL + +
Sbjct: 31 DKYPGIN-IYTDGSKSNDAVACAF--TCSTYQIQFGLPAQMSIYTAELIAIEQALIFIET 87
Query: 255 IKEKE 259
+K+++
Sbjct: 88 VKDED 92
>gi|427782519|gb|JAA56711.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 460
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 12/217 (5%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
FK + T AE A+ AL +++ + + I +DSK+ L+ L + + G L+
Sbjct: 199 FKTSHLTTSTAAELAALRVALDFITDERAQKWAIFSDSKAALQSLLSPLR-RGLHEQLVF 257
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAV 403
+I + L E + F W+ H GI GNE D+ A+ + + IP+ A
Sbjct: 258 EITEETHRLIEKGHQITFQWLPSHCGIIGNERADQAARSAHTESSQIL---IPLSRTDAA 314
Query: 404 TDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP--LRKFIVTFN-RLRSNH 460
++ + R+ +SQ N L+++ P + IP LR+ T RL
Sbjct: 315 WKLR--VLARQCTVSQWNEPHFKNARLYSL---DPTLSLRIPPGLRRGDATLLCRLWLGV 369
Query: 461 AICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
A AY +I +A T C C E + HI+ CP+Y
Sbjct: 370 AFTHAYAFRIGMADTAACDHCSGDETIQHILCECPQY 406
>gi|317033408|ref|XP_001395701.2| reverse transcriptase [Aspergillus niger CBS 513.88]
Length = 1618
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 20/255 (7%)
Query: 253 SSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKE 312
+S KE + G V++ + I ++ + G+ + F +++ AE AI A+ V + +
Sbjct: 1296 ASGKENQLGAAAVALDHNQRIVGSRQVSIGSME---FWSVYAAELMAIYYAIGLVFQLAQ 1352
Query: 313 ----------NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFI 362
I++DS S L+ +KN+ +G +I I ++ L+ I +R
Sbjct: 1353 KNQRSRATDAEPATILSDSMSALQVIKNSWNKSGQ--RIIQAIHQSAGELRARGIPLRLQ 1410
Query: 363 WVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNN 422
WV GH G GNEA DRLAK T G + +P+ + + +W + + N
Sbjct: 1411 WVPGHCGNPGNEAADRLAKATV-GGEKRHPFRHLLSREKRYIRRNISDEWHQEWRASRNG 1469
Query: 423 KGLFYKNLFTITDKKPWFAKAIPL-RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQEC 481
L + ++ ++P R +++T +LR+ H+ + + + C EC
Sbjct: 1470 GHLRRIDRALPANRTRRLYGSLPRNRAYLLT--QLRTGHSWLATHGKQRGLRDDEKC-EC 1526
Query: 482 LEREDMAHIILCCPK 496
E + H+++ CP+
Sbjct: 1527 GATETVVHVLIDCPR 1541
>gi|443721618|gb|ELU10867.1| hypothetical protein CAPTEDRAFT_200496, partial [Capitella teleta]
Length = 471
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 106/267 (39%), Gaps = 68/267 (25%)
Query: 195 DKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTAEAFAILQALKYASS 254
D++P++ + +TDGSK+ +SVA +F ++S
Sbjct: 15 DRYPDSTVFYTDGSKSEDSVACSF--------------------------------FSSR 42
Query: 255 IKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKE-N 313
+K K KL ++FT+E AIL AL+ V + E +
Sbjct: 43 LKLK-------------------------MKLPVQMSVFTSEIIAILSALRCVEADNEQH 77
Query: 314 EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGN 373
+ +I +DS S + + + +L + A+ + + V F+W H GI GN
Sbjct: 78 QFVICSDSLSAIMAIHGMDVRHP----YVLQVLYAIKSISQQEKIVVFMWCPSHVGIPGN 133
Query: 374 EAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTI 433
E D LAKE T+ L P+P D+R + +W+ Q++NK + TI
Sbjct: 134 EMADTLAKEALSSTN-LAELPVPASDLRCLIKKYIRSRWQHEWDEQHSNK--LHSIHPTI 190
Query: 434 TDKKPWFAKAIPLRKFIVTFNRLRSNH 460
PW R+ + R+R H
Sbjct: 191 ---GPWPPCQREKRREEIVLARIRIGH 214
>gi|255940918|ref|XP_002561228.1| Pc16g09090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585851|emb|CAP93579.1| Pc16g09090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 696
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 253 SSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI-- 310
+S +E G V++ L + ++Q G + ++ AE I A+ V I
Sbjct: 390 ASGREGHLGAAAVALGNDLQVIESQQVQVGPM---DRWSVHVAELIGIFYAVSTVFKISH 446
Query: 311 --------KENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFI 362
+ I+ DSKS L+ ++N +G +I I +A + +Q I++R
Sbjct: 447 QRPRTEHNRTTTATILCDSKSALQAIENPGNKSGQ--RIIHAILQAAAEVQAKGIALRLQ 504
Query: 363 WVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNN 422
W+ GH GN+A DRLAK+ A +P+ + RA+ + QW E + + N
Sbjct: 505 WIPGHCDDPGNDAADRLAKDAA-SPGKTHPFRPLLTRKRALIRDKIRAQW-EREWNASTN 562
Query: 423 KGLFYK--NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQE 480
G K + + + R +++T +LR+ H AY + C
Sbjct: 563 GGHLRKIDRTLPASYTRKLYGNLPRGRAYLLT--QLRTGHNWLSAYAKTFGFRDNDQCV- 619
Query: 481 CLEREDMAHIILCCPKYQ 498
C +E + H+++ CP +
Sbjct: 620 CGAQETVTHVLVDCPNLR 637
>gi|331229368|ref|XP_003327350.1| hypothetical protein PGTG_09899 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1673
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 29/223 (13%)
Query: 293 FTAEAFAILQALKYVSSI-------KENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDI 345
+ AE I A++ I K N V I D++ L + + +S+ H+ D
Sbjct: 1408 YEAELIGIRLAIRLAKRIIWSAWPGKFNRVAIFGDNQGALTQTADPLQSSPG-QHIYADN 1466
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPY-----PIPVQDV 400
F +L L I V W GH G+A NE D+LAK A+ ++ Y P+P
Sbjct: 1467 FSSLRSL---GIPVALYWCPGHEGLAANEQADKLAKSEAQHSEEDTAYAALCRPVPA--- 1520
Query: 401 RAVTDMQHEIQ--WREN-VMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRK-FIVTFNRL 456
+++ M+ + W V+S K +K D +P A K T +L
Sbjct: 1521 -SLSKMKQACRPMWDHGPVLSTEERKRYRFK-----ADPRPVIAALDEQAKGLTATILQL 1574
Query: 457 RSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
R++HA +L KI C C ERE H ++ C KY++
Sbjct: 1575 RADHAPLNHFLFKIKQTLDPRCTNCFERETAPHFLMFCKKYRI 1617
>gi|443734398|gb|ELU18400.1| hypothetical protein CAPTEDRAFT_213104 [Capitella teleta]
Length = 330
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
S + ++ + +FTAEA AI L ++ + + V I++DS S LE ++NTS S
Sbjct: 177 STSVRISDCTDVFTAEAKAIEACLMLLAQRQISPVTILSDSLSVLEAMQNTSSST----- 231
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKET 383
+I DI AL+ N+ V F+W+ H GI GNEA D LAK +
Sbjct: 232 VISDIQVALNVAANSNVDVSFLWIPSHCGIQGNEAADALAKAS 274
>gi|242814698|ref|XP_002486420.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218714759|gb|EED14182.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 874
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + ALK+ + + ++ D+++ +++L++T G L+L KA
Sbjct: 585 VFDAELVGVATALKWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQA--LVLRAHKAAE 642
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 643 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 702
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 703 AVSEWAQINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRLASRYYQLKTGHA 754
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 755 PIGTYLYRIGQRESPECQACKEPHETVRHVLFEC 788
>gi|242807798|ref|XP_002485031.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218715656|gb|EED15078.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 361
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + + D+++ +++L++T G L+L KA
Sbjct: 72 VFDAELVGVATALEWALERQPLGPIWVFLDAQNAIDRLRSTRPGPGQ--ALVLRAHKAAE 129
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 130 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 189
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 190 AVSEWAQINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRLASRYYQLKTGHA 241
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 242 PIGTYLYRIGRRESPECQACKEPHETVRHVLFEC 275
>gi|119196745|ref|XP_001248976.1| hypothetical protein CIMG_02747 [Coccidioides immitis RS]
Length = 2000
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 290 ATIFTAEAFAILQALK-----YVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
+T++ AE ++ AL+ + + + I TD+++ ++ ++N S+G +++L+
Sbjct: 1617 STVYAAELRGLVLALEIILDLHATGATPRKCAIFTDNQAAIQAIRNPKHSSGQ--YILLE 1674
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN----PYPIPVQDV 400
+AL L+ + V+F W+ H G+ GNE DR+AKE +N P P++ +
Sbjct: 1675 AIQALDMLRNFGWEVQFRWIPAHVGVPGNEEADRMAKEATGVDPGINIERLPETDPLRIL 1734
Query: 401 RAVTD------MQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFN 454
A T M+HE W + + + + LF L K + R
Sbjct: 1735 TATTKSTIRQRMKHE--WETSWENAKHGRELF--RLGIRPGKAILNTHSGTHRAISSAIT 1790
Query: 455 RLRSNHAICQAYLHKINIAPTNLCQ 479
++R+ + YL+ IN A T+ CQ
Sbjct: 1791 QMRTGKIGLRTYLYSINKADTDKCQ 1815
>gi|154270239|ref|XP_001535976.1| hypothetical protein HCAG_09089 [Ajellomyces capsulatus NAm1]
gi|150410083|gb|EDN05471.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 832
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 37/227 (16%)
Query: 291 TIFTAEAFAILQALKYVSSIKENE----------VIIITDSKSCLEKLKNTSKSNGNPSH 340
T+ TAE AI L V +E I++DS + L + N+SK G
Sbjct: 560 TVTTAELLAIYHGLYLVWRSHSSEGTPPPHQHHTYTILSDSHTALRAIANSSKQVG--GQ 617
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
++ +I + L+ I + WV GH+GI GNE D+LAK++ + + +P P +
Sbjct: 618 IVQNILRTTKQLKSIGIDLCLQWVPGHSGIRGNEMADQLAKQSI-NPNPTHGFPKPASHL 676
Query: 401 RAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP---LRKFIVTFNR-- 455
R + +WR+ S KG + + A+P R+ T R
Sbjct: 677 REASRNSTTHEWRDEWSS--TAKGTHLRKI----------DAALPGQHTRRLYATLPRPQ 724
Query: 456 ------LRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPK 496
LR+ H+ + ++I N C EC +E + H+++ C +
Sbjct: 725 ARLLAQLRTGHSWLNEFRNQIKYTDNNKC-ECGAKELVHHVLVDCSR 770
>gi|326475951|gb|EGD99960.1| hypothetical protein TESG_08624 [Trichophyton tonsurans CBS 112818]
Length = 1605
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNE 374
V I++DSKS L+ L N + NG+ H++ I K+ L+ +S+R W+ H GN+
Sbjct: 1365 VTILSDSKSGLQTLTN--QRNGSGQHIVRAIAKSARDLKAHGVSIRLQWIPSHCNNPGND 1422
Query: 375 AVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTIT 434
DRLAKE A GT +P+ + +A + +W S + L +
Sbjct: 1423 TADRLAKE-AVGTQPSHPFQNLLSREKAFIRDRVLAEWDSEWKSSSKGAHLRRIDASLPG 1481
Query: 435 DKKPWFAKAIPL-RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
+ A+P R +++T +LR+ H+ ++ + C EC +E + H+++
Sbjct: 1482 NHTRHLYGALPRGRAYLLT--QLRTGHSWLASHAKAYRFREDDKC-ECGAKETVVHVLVD 1538
Query: 494 CPK 496
CPK
Sbjct: 1539 CPK 1541
>gi|427781947|gb|JAA56425.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 8/216 (3%)
Query: 283 TFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
T+KL + +T +E A+ A+ ++ N + DSK+ L+ L + + G+ L+
Sbjct: 193 TYKLCHVSTSTGSELAALRGAVNHIKEQPANRWAVFCDSKAALQCLSSALR-RGSYEQLV 251
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-R 401
+I + L ++ E V F W+ H GI+GN+ D A+E A G +L P+ D R
Sbjct: 252 WEIREMLHNVTEQGHDVVFQWLPSHCGISGNDLADEAARE-AHGETSLVSIPLSRIDAAR 310
Query: 402 AVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
++ + + + SQ ++ L+ + P + R+ RLR A
Sbjct: 311 YLSKLAQNMTLQMWRTSQFTDQRLYSLDPSLRLRLLPGLS-----REEDTVLCRLRLGVA 365
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
AY KI +A C +C E + HI+ CP Y
Sbjct: 366 FTNAYSFKIEMADNAECNDCAVAETIEHILCNCPTY 401
>gi|242814149|ref|XP_002486313.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218714652|gb|EED14075.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1193
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 21/224 (9%)
Query: 289 FATIFTAEAFAILQALKYVSSI----------KENEVIIITDSKSCLEKLKNTSKSNGNP 338
+ +++ AE AI A+ V I ++ I++DS S L+ + N +G
Sbjct: 920 YWSVYAAELMAIYYAISLVLKIALENWDTTASQQEPATILSDSMSALQAISNARNKSGQ- 978
Query: 339 SHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQ 398
+I + ++ L+ I +R WV GH G GNEA DRLAKE A G D +P+ +
Sbjct: 979 -RIIQAVRQSARELKARGIPLRLQWVPGHCGDPGNEAADRLAKE-AVGLDKEHPFQHLLS 1036
Query: 399 DVRAVTDMQHEIQWRENVMSQNNNKGL--FYKNLFTITDKKPWFAKAIPL-RKFIVTFNR 455
+ + + +W + N L +NL + ++ ++P R +++T +
Sbjct: 1037 REKGFIHNRIQEEWERGWKTSKNGGHLRRIDRNLPAVRTRR--MYGSLPRNRAYLLT--Q 1092
Query: 456 LRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
LR+ H+ + K++ N EC E + H+++ CPK +
Sbjct: 1093 LRTGHSWLATH-GKLHGHRENDKCECGAIETVVHVLIHCPKLKT 1135
>gi|427791847|gb|JAA61375.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 928
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 29/217 (13%)
Query: 285 KLKNFATIFTAEAFAILQALKYV-SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
+L A+ TAE I A + S + + I TDS+S L +L +K + P L
Sbjct: 730 RLVYRASSTTAELVGIHLAADLIRESPQVSRAAIFTDSRSALRQL---AKEDRAPP-LAE 785
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAV 403
+ +L L+E+ V W+ H GIAGNEA D LAK A +P +P+
Sbjct: 786 RVAWSLHSLREYGCDVALQWIPSHVGIAGNEAADDLAKA------AHDPA-VPLTTCADS 838
Query: 404 TDMQHEIQWRENVMSQNNNK---GLFYKNL--FTITDKKPWFAKAIPLRKFIVTFNRLRS 458
D + RE V + + + G ++L T+T K+ R F++ LR+
Sbjct: 839 ADSARQNLRREIVRNHPDERTAAGSPPRHLPESTLTRKE---------RSFLLA---LRT 886
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
H++ A + LC +C ERE MAH+ L CP
Sbjct: 887 GSVWPAELRHRLRGALSPLCHDCGERETMAHLFLFCP 923
>gi|242775779|ref|XP_002478708.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218722327|gb|EED21745.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 294
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++L++T G L+L +A
Sbjct: 23 VFDAELVGVATALEWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQA--LVLRAHRAAE 80
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 81 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 140
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 141 AVSEWAQINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRVASRYYQLKTGHA 192
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 193 PIGTYLYRIGQRESPECQACKEPHETVRHVLFEC 226
>gi|242798615|ref|XP_002483206.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218716551|gb|EED15972.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 533
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + + + D+++ +++L++T G L+L KA
Sbjct: 244 VFDAELVGVATALEWALERQPLDPIWVFLDAQNAIDRLRSTRPGPGQA--LVLRAHKAAE 301
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 302 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 361
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 362 AVSEWAQINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRLASRYYQLKTGHA 413
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 414 PIGTYLYRIGRRESPECQACKEPHETVRHVLFEC 447
>gi|156057831|ref|XP_001594839.1| hypothetical protein SS1G_04647 [Sclerotinia sclerotiorum 1980]
gi|154702432|gb|EDO02171.1| hypothetical protein SS1G_04647 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 487
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S S G + KA
Sbjct: 215 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDSPGQSCQI--KAIKAA 272
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHE 409
+Q + WV GH + GNE D LAKE + + + + A M +
Sbjct: 273 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSH------ETSYASIGMDIK 326
Query: 410 IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHAIC 463
EN M+ N F++ T + PW + IP R I +L+ H
Sbjct: 327 RMKSENWMAILNTNN-FHQPSSTYSRNYPWKISSKIRIPGNIKRSTICALFQLKIGHGYF 385
Query: 464 QAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 386 KSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 420
>gi|111610034|gb|ABH11533.1| reverse transcriptase [Phengaris teleius]
Length = 131
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 7/77 (9%)
Query: 36 ESLNTAGKNDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAY 95
+ LNT DN I+P EQ+GC K+ L++D I KK +KNL A+ID KA+
Sbjct: 13 QKLNTHI-TDNKIIPEEQKGC------AKEQLIVDAQIHNQTKKDHKNLYYAYIDYQKAF 65
Query: 96 DNCPHEWMVKVIQMYKI 112
D+ PH W++ V+++YKI
Sbjct: 66 DSVPHSWLIHVLKIYKI 82
>gi|90409437|ref|ZP_01217503.1| hypothetical protein PCNPT3_00010, partial [Psychromonas sp. CNPT3]
gi|90309457|gb|EAS37676.1| hypothetical protein PCNPT3_00010 [Psychromonas sp. CNPT3]
Length = 776
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
FKL+ T+FTAE AI AL +++ ++ I TDS S +E LK T ++ + I+
Sbjct: 657 FKLRQPCTVFTAELAAIFYALLLIAASPPDQYFIFTDSLSAIEALK-TPRAVKSQDFFIV 715
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD 399
I + L L + + IWV H GI GNE D LAK T A PI Q+
Sbjct: 716 KIIELLGSLFDKAFRISLIWVPSHCGIPGNEKADSLAK-TGVKEGAFYDRPISSQE 770
>gi|154274349|ref|XP_001538026.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415634|gb|EDN10987.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1838
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
AT++ AE IL L + + I TD+++ L L+N +S+G ++ I AL
Sbjct: 1563 ATVYAAELLGILMGLNLILTSDRRRAAIFTDNQAALRALQNPRRSSGQ--SILRRIIDAL 1620
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
++ + V F W+ H GI GNE D+LAKE
Sbjct: 1621 ERVRSQGLQVEFYWIPAHQGIEGNELADKLAKE 1653
>gi|242825408|ref|XP_002488434.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712252|gb|EED11678.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 906
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + I+ D+++ +++LK+ G L+L +A+
Sbjct: 617 VFDAELVGVATALEWALERQPLGPIWILLDAQNAIDRLKSARPGPGQA--LVLRAHRAVE 674
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+G+ GNE D+ AK A A + + V RA T+ +
Sbjct: 675 KLAMRGQPVTIQWVPGHSGVVGNEQADQAAKRAASKQTAPGFEHLSLAYVRRACTEARRA 734
Query: 410 I--QW-RENVMSQNNNKGLFYKN-----LFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W R N + + G YK L + K P ++ + +L++ HA
Sbjct: 735 AVSEWARINAVRGRHRDGRIYKMPRGWILDPVAGKAP--------KRLASRYYQLKTGHA 786
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YLH+I + CQ C E E + H++ C
Sbjct: 787 PIGTYLHRIGRRESPECQACKEPHETVRHVLFEC 820
>gi|242794494|ref|XP_002482386.1| hypothetical protein TSTA_121370 [Talaromyces stipitatus ATCC 10500]
gi|218718974|gb|EED18394.1| hypothetical protein TSTA_121370 [Talaromyces stipitatus ATCC 10500]
Length = 1125
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + + D+++ +++L++T G L+L KA
Sbjct: 836 VFDAELVGVATALEWALERQPLGPIWVFLDAQNAIDRLRSTRPGPGQ--ALVLRAHKAAE 893
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 894 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 953
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 954 AVSEWAQINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRLASRYYQLKTGHA 1005
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 1006 PIGTYLYRIGRRESPECQACKEPHETVRHVLFEC 1039
>gi|242775805|ref|XP_002478713.1| endonuclease/reverse transcriptase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218722332|gb|EED21750.1| endonuclease/reverse transcriptase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1959
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++L++T G L+L +A
Sbjct: 1670 VFDAELVGVATALEWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQ--ALVLRAHRAAE 1727
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 1728 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 1787
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 1788 AVSEWAQINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRLASRYYQLKTGHA 1839
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 1840 PIGTYLYRIGQRESPECQACKEPHETVRHVLFEC 1873
>gi|255940952|ref|XP_002561245.1| Pc16g09270 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585868|emb|CAP93597.1| Pc16g09270 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1513
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 23/191 (12%)
Query: 317 IITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAV 376
I+ DSKS L+ ++N +G ++ I +A + +Q NI +R W+ GH GN+
Sbjct: 1278 ILCDSKSALQAIQNVKNKSGQ--RIVHAILQAATEVQGENIKLRLQWMPGHCENRGNDTA 1335
Query: 377 DRLAKETARGTDALNPYPIPVQD---VRAVTDMQHEIQWRENVMSQNNNK---GL---FY 427
DRLAKE A+ P+ ++ VR+ Q +W+ + + K GL +
Sbjct: 1336 DRLAKEAAQPGKTHPFRPLLSRENAFVRSKIYAQWGQEWKTSTKGAHLRKIDGGLPARYT 1395
Query: 428 KNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDM 487
+ L+ + R +++T +LR+ H Y K +LC EC +E +
Sbjct: 1396 RKLYGNLPRN---------RAYLLT--QLRTGHNWLSTYAKKFGFREHDLC-ECGVQETV 1443
Query: 488 AHIILCCPKYQ 498
AH++L CP+ Q
Sbjct: 1444 AHVLLECPRLQ 1454
>gi|443712830|gb|ELU05953.1| hypothetical protein CAPTEDRAFT_202466 [Capitella teleta]
Length = 397
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 15/219 (6%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIK-ENEVIIITDSKSCLEKLKNTSKSNGNPSH-L 341
F L +I+TAE AI QAL ++ ++K E++ I +DS S L T+ SN + +H
Sbjct: 157 FGLPAQMSIYTAELIAIEQALIFIETVKDEDQFNICSDSLSSL-----TALSNCDITHPY 211
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
+L I ++L V FIW H GI GNE DR AK+ + P+P D +
Sbjct: 212 LLSILTKQNNLVRKGKKVVFIWCPSHVGILGNEVADRQAKQAL--VMPVTKLPLPHTDYK 269
Query: 402 AVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+ + W+ + +NK + + + + P + + ++ R+ +H
Sbjct: 270 SPIRSYVKSLWQNEWDGETDNKLHIIQPVISEWKQGPQIDRR---GEIVLACARIGHSH- 325
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVT 500
+ YL + +AP C C + HI++ C ++++
Sbjct: 326 LTHGYLLRREVAP--FCIPCQSLLTVKHILIDCIDFEIS 362
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 195 DKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTAEAFAILQALKYASS 254
DK+P I+TDGSK++++VA AF T + F L +I+TAE AI QAL + +
Sbjct: 126 DKYPGIN-IYTDGSKSNDTVACAF--TCSTYQIQFGLPAQMSIYTAELIAIEQALIFIET 182
Query: 255 IKEKE 259
+K+++
Sbjct: 183 VKDED 187
>gi|242807844|ref|XP_002485040.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218715665|gb|EED15087.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 839
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++L++T G L+L KA
Sbjct: 303 VFDAELVGVATALEWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQA--LVLRAHKAAE 360
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 361 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 420
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 421 AVSEWAQINAVQGRHRDGRAYKMPRGWNLDPVAGKAP--------KRVASRYYQLKTGHA 472
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 473 PIGTYLYRIGQRESPECQACKEPHETVRHVLFEC 506
>gi|156037426|ref|XP_001586440.1| hypothetical protein SS1G_12425 [Sclerotinia sclerotiorum 1980]
gi|154697835|gb|EDN97573.1| hypothetical protein SS1G_12425 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 292
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G + KA
Sbjct: 60 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAA 117
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 118 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYASIGMDIK---RMK 174
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + IP R I +L+ H
Sbjct: 175 SE-NWIA-ILNTNN----FHQPSSTYSRNYPWKISSKIRIPGNIKRSTICALFQLKIGHG 228
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 229 YFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 265
>gi|242765602|ref|XP_002341008.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218724204|gb|EED23621.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 592
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + + D+++ +++L++T G L+L KA
Sbjct: 303 VFDAELMGVATALEWALERQPLGPIWVFLDAQNAIDRLRSTRPGPGQA--LVLRAHKAAE 360
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 361 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 420
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 421 AVSKWAQINAVQGRHRDGCVYKMPRGWNLDPVAGKAP--------KRLASRYYQLKTGHA 472
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 473 PIGTYLYRIGQRESPECQACKEPHETVRHVLFEC 506
>gi|242794486|ref|XP_002482384.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218718972|gb|EED18392.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1025
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKENEVI-IITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + I ++ D+++ +++L++T G L+L +A
Sbjct: 105 VFDAELVGVATALEWALERQPLDPIWVLLDAQNAIDRLRSTRPGPGQA--LVLRAHRAAK 162
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 163 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 222
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 223 AVSEWAQINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRVASRYYQLKTGHA 274
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 275 PIGTYLYRIGQRESPECQACKEPHETVRHVLFEC 308
>gi|156037302|ref|XP_001586378.1| hypothetical protein SS1G_12362 [Sclerotinia sclerotiorum 1980]
gi|154697773|gb|EDN97511.1| hypothetical protein SS1G_12362 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 486
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S S G + KA
Sbjct: 215 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDSPGQSCQI--KAIKAA 272
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHE 409
+Q + WV GH + GNE D LAKE + + + + A M +
Sbjct: 273 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSH------ETSYASIGMDIK 326
Query: 410 IQWREN---VMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNH 460
EN +++ NN F++ T + PW + IP R I +L+ H
Sbjct: 327 RMKSENWIAILNTNN----FHQPSSTYSRNYPWKISSKIRIPGNIKRSTICALFQLKIGH 382
Query: 461 AICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 383 GYFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 420
>gi|242765569|ref|XP_002341001.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218724197|gb|EED23614.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 805
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + + D+++ +++L++T G L+L KA
Sbjct: 516 VFDAELMGVATALEWALERQPLGPIWVFLDAQNAIDRLRSTRPGPGQA--LVLRAHKAAE 573
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 574 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 633
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 634 AVSKWAQINAVQGRHRDGCVYKMPRGWNLDPVAGKAP--------KRLASRYYQLKTGHA 685
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 686 PIGTYLYRIGQRESPECQACKEPHETVRHVLFEC 719
>gi|242824216|ref|XP_002488214.1| hypothetical protein TSTA_005900 [Talaromyces stipitatus ATCC
10500]
gi|218713135|gb|EED12560.1| hypothetical protein TSTA_005900 [Talaromyces stipitatus ATCC
10500]
Length = 252
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNE 374
+ + D+++ +++LK++ G L+L +A+ L V WV GH+GI GNE
Sbjct: 21 IWVFLDAQNAIDRLKSSRPGPGQ--ALVLRAHRAVEKLAMRGQLVTIQWVPGHSGIEGNE 78
Query: 375 AVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHEI--QW-RENVMSQNNNKGLFYK-- 428
D+ AK A A + + V RA T+ + +W R N + + G YK
Sbjct: 79 QADQAAKRAASKQTAPGFEHLSLAYVRRACTEARRAAVSEWARINAVQGRHRDGRVYKMP 138
Query: 429 ---NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLE-R 484
NL + K P ++ + +L++ HA YLH+I + CQ C E
Sbjct: 139 RGWNLDPVAGKAP--------KRLASRYYQLKTGHAPIGTYLHRIGRRESPECQACKEPH 190
Query: 485 EDMAHIILCC 494
E + H++ C
Sbjct: 191 ETVRHVLFEC 200
>gi|242775784|ref|XP_002478709.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218722328|gb|EED21746.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 991
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++L++T G L+L +A
Sbjct: 702 VFDAELVGVATALEWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQA--LVLRAHRAAE 759
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 760 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 819
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 820 AVSEWAQINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRVASRYYQLKTGHA 871
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 872 PIGTYLYRIGQRESPECQACKEPHETVRHVLFEC 905
>gi|358376861|dbj|GAA93349.1| transposon I factor [Aspergillus kawachii IFO 4308]
Length = 362
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 23/239 (9%)
Query: 273 IFDTQNKNSGTFKLK----NFATIFTAEAFAILQALKYVSSI----------KENEVIII 318
+ D + +G+ +++ ++ AE IL A+ ++ I + V I+
Sbjct: 69 VLDDASITTGSLQIQVGPMGQWSVHAAELIGILYAINLINRIVLQQRRAGQKRARTVTIL 128
Query: 319 TDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDR 378
+DS S L ++ +G +I I +A + + +++R WV GH+ I GN+ DR
Sbjct: 129 SDSMSALLAIQKPGNKSGQ--QIIYAILQAAKNTRTHGVTIRLQWVPGHSEILGNDTADR 186
Query: 379 LAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK-- 436
LAKE A +P+ + RA QW E ++ + G K T+ K
Sbjct: 187 LAKEAAI-PGRTHPFSPLLSRERAYIRQGILTQW-EKEWKESRDGGHLRKIDNTLPAKYT 244
Query: 437 KPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
+ + R +++T ++RS H Y + C C ERE + H++L CP
Sbjct: 245 RRLYGSLPRNRAYLLT--QIRSGHCWLSTYGKLFGFHDDDRCL-CGERESILHVLLDCP 300
>gi|156048334|ref|XP_001590134.1| hypothetical protein SS1G_08898 [Sclerotinia sclerotiorum 1980]
gi|154693295|gb|EDN93033.1| hypothetical protein SS1G_08898 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 401
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E +++A++Y +SI + N+ I +D+++ L +LK S G + KA
Sbjct: 129 VYNGELLGVVKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAA 186
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 187 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYASIGMDIK---RMK 243
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + IP R I +L+ H
Sbjct: 244 SE-NWI-TILNTNN----FHQPSSTYSRNYPWKISSKIRIPGNIKRSTICALFQLKIGHG 297
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 298 YFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 334
>gi|427783937|gb|JAA57420.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 460
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 12/197 (6%)
Query: 304 LKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIW 363
L +++ I DSK+ L+ L +T + G L+ + + L HL E + F W
Sbjct: 219 LHFINDQMRKRWTIFCDSKTALQSLLSTLR-RGPHEQLVFETAEMLHHLTEKGHHITFQW 277
Query: 364 VRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNK 423
+ H GI GNE D+ A+ L+ IP+ A ++ + R+ S N
Sbjct: 278 LPSHCGIIGNERADQAARSAHTEDRDLS---IPLSRTDAARKLR--MLARQYTTSNWNEP 332
Query: 424 GLFYKNLFTITDKKPWFAKAIP--LRKFIVT-FNRLRSNHAICQAYLHKINIAPTNLCQE 480
+ L + P + IP LR+ T RL A +AY +I +A T C+
Sbjct: 333 HFMHPRLHCL---DPTLSLRIPPRLRRGDATVLCRLWLGVAFTRAYAFRIGMADTAACEH 389
Query: 481 CLEREDMAHIILCCPKY 497
C E + H++ CPKY
Sbjct: 390 CGNEETIRHVLCDCPKY 406
>gi|242826135|ref|XP_002488580.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712398|gb|EED11824.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1154
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 15/222 (6%)
Query: 288 NFATIFTAEAFAILQALKYVSSI----------KENEVIIITDSKSCLEKLKNTSKSNGN 337
+ +++TAE AI A+ V I ++ I++DS S L+ + N +G
Sbjct: 880 EYWSVYTAELMAIYYAISLVLKIALENWDTTASQQEPATILSDSMSALQAISNARNKSGQ 939
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPV 397
+I + ++ L+ I +R WV GH GNEA DRLAKE A G D +P+ +
Sbjct: 940 --RIIQAVRQSARELKARGIPLRLQWVPGHYSDLGNEAADRLAKE-AVGLDKEHPFQHLL 996
Query: 398 QDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLR 457
+ + + +W E + N G ++ + + W R +LR
Sbjct: 997 SREKGFIRNRIQEEW-ERGWKTSKNGGHLWRIDRNLPAVRTWRMYGSLPRNRAYLLTQLR 1055
Query: 458 SNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++H+ + + C EC E + H+++ CPK +
Sbjct: 1056 TSHSWLATHGKLHGHREDDKC-ECGAIETVVHVLIHCPKLKT 1096
>gi|242825825|ref|XP_002488518.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712336|gb|EED11762.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 427
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 15/187 (8%)
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNE 374
+ I++DSKS ++ +KN ++G +I I ++ L I + W+ GH GN+
Sbjct: 177 ITILSDSKSAIQAIKNPRNTSGQ--RVIEAINQSAYELDSRGIPLHLQWIPGHCDNLGND 234
Query: 375 AVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFT-- 432
A DRLAK A G +P+ PV +A Q +W + + +NKG + + T
Sbjct: 235 AADRLAK-AAVGPTKTHPFCRPVSREKAAIQRQILKEWEDEW--KTSNKGTHLQRIDTKL 291
Query: 433 --ITDKKPWFAKAIPL-RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAH 489
I ++ +++P R +++T +LR+ H+ + + N C EC +E + H
Sbjct: 292 PAIHSRR--LYQSLPRNRAYLLT--QLRTGHSWLATHGKALRHHEDNKC-ECGAKETVVH 346
Query: 490 IILCCPK 496
I++ CP+
Sbjct: 347 ILIDCPR 353
>gi|242765587|ref|XP_002341005.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218724201|gb|EED23618.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1091
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + + D+++ +++L++T G L+L KA
Sbjct: 802 VFDAELVGVATALEWALERQPLGPIWVFLDAQNAIDRLRSTRPGPGQA--LVLRAHKAAE 859
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 860 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 919
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 920 AVSEWAQINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRLASRYYQLKTGHA 971
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 972 PIGTYLYRIGRRESPECQACKEPHETVRHVLFEC 1005
>gi|156052491|ref|XP_001592172.1| hypothetical protein SS1G_06411 [Sclerotinia sclerotiorum 1980]
gi|154704191|gb|EDO03930.1| hypothetical protein SS1G_06411 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1114
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S S G + KA
Sbjct: 842 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDSPGQSCQI--KAIKAA 899
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 900 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYASIGMDIK---RMK 956
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + IP R I +L+ H
Sbjct: 957 SE-NWIA-ILNTNN----FHQPSSTYSRNYPWKISSKIRIPGNIKRSTICALFQLKIGHG 1010
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 1011 YFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 1047
>gi|156045854|ref|XP_001589482.1| hypothetical protein SS1G_09203 [Sclerotinia sclerotiorum 1980]
gi|154693599|gb|EDN93337.1| hypothetical protein SS1G_09203 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 778
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G + KA
Sbjct: 264 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAA 321
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 322 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYASIGMDIKR---MK 378
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + IP R I +L+ H
Sbjct: 379 SE-NWI-TILNTNN----FHQPSSTYSRNYPWKISSKIRIPGNIKRSTICALFQLKIGHG 432
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 433 YFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 469
>gi|242814632|ref|XP_002486407.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218714746|gb|EED14169.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 454
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIK-ENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + + D+++ +++L++T G L+L +A
Sbjct: 165 VFDAELVGVATALEWALERQFLGPIWVFLDAQNAIDRLRSTRPGPGQA--LVLRAHRAAE 222
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 223 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 282
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 283 AVSEWAQINAVQGRHRDGCVYKMPRGWNLDPVAGKAP--------KRVASRYYQLKTGHA 334
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 335 PIGTYLYRIGQRESPECQACKEPHETVRHVLFEC 368
>gi|358376045|dbj|GAA92616.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 861
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 23/239 (9%)
Query: 273 IFDTQNKNSGTFKLKNFAT----IFTAEAFAILQALKYVSSI----------KENEVIII 318
+ D ++ +G+ +++ T + AE IL A+ ++ I + V I+
Sbjct: 568 VLDDESVTTGSLQIQVGPTDQWSVHAAELIGILYAINLINRIVLQQRRAGQKRARTVTIL 627
Query: 319 TDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDR 378
+DS S L ++ +G +I I +A + + +++R WV GH+ I GN+ DR
Sbjct: 628 SDSTSALLAIQKPGSKSGQ--QIIYAILQAAKNTRTHGVTIRLQWVPGHSEILGNDTADR 685
Query: 379 LAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK-K 437
LAKE A +P+ + RA QW E ++ + G K T+ K
Sbjct: 686 LAKEAA-IPGKTHPFSPLLSRERAYIRHGILTQW-EKEWKESRDGGHLRKIDNTLPAKYT 743
Query: 438 PWFAKAIPL-RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
A+P R +++T ++RS H Y + C C RE + H++L CP
Sbjct: 744 RRLYGALPRNRAYLLT--QIRSGHCWLSTYGKLFGFRDDDRCL-CGGRESIIHVLLDCP 799
>gi|294892079|ref|XP_002773884.1| hypothetical protein Pmar_PMAR011746 [Perkinsus marinus ATCC 50983]
gi|239879088|gb|EER05700.1| hypothetical protein Pmar_PMAR011746 [Perkinsus marinus ATCC 50983]
Length = 1178
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 22/242 (9%)
Query: 259 EAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKE----NE 314
EAG C S+ + I+ NK + F+L FATI+ AE +AI+ AL+ + KE +
Sbjct: 904 EAGTC--SVGAAAIIYKHSNKEAHRFRLPPFATIYQAEQYAIIGALEALKKDKEVADGSR 961
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGH---AGIA 371
V+ +D +S L+++ G H I + S ++ I+ FIW+ H I
Sbjct: 962 VLFFSDCRSVLQRI-----LGGGGDHWSNRILEIASSMRVEGITCCFIWIPSHQQDGTIP 1016
Query: 372 GNEAVDRLAKETARGTD---ALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYK 428
GNE D L AR + ++ +PIP+ + + + Q S +N + +
Sbjct: 1017 GNEEAD-LEANRARLLELDGVVSDFPIPIAHTKGLLNNYARAQVVREAASISNPE---LR 1072
Query: 429 NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINI-APTNLCQECLEREDM 487
+ + ++ + + K N L + I ++YL KI A LCQ C ++
Sbjct: 1073 AMLSSRRQRGIVERQLRSYKDGSVLNLLAGHSKILRSYLAKIKPDAYDPLCQTCGVTHNL 1132
Query: 488 AH 489
H
Sbjct: 1133 VH 1134
>gi|156052939|ref|XP_001592396.1| hypothetical protein SS1G_06637 [Sclerotinia sclerotiorum 1980]
gi|154704415|gb|EDO04154.1| hypothetical protein SS1G_06637 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1249
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G + KA
Sbjct: 151 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAA 208
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR-AVTDMQH 408
+Q + WV GH + GNE D LAKE + P P + A M
Sbjct: 209 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATK-------IPSPSHETSYASIGMDI 261
Query: 409 EIQWREN---VMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSN 459
+ EN +++ NN F++ T + PW + +P R I +L+
Sbjct: 262 KRMKSENWIAILNTNN----FHQPSSTYSRNYPWKISSKIRVPGNIKRSTICALFQLKIG 317
Query: 460 HAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVTLAI 503
H ++YL + I+ + C+ C +E H++L CP Y+ I
Sbjct: 318 HGYFKSYLKRFGISSNDSCR-CGGKESPDHLLLNCPIYKTARKI 360
>gi|443724607|gb|ELU12531.1| hypothetical protein CAPTEDRAFT_208903 [Capitella teleta]
Length = 397
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 23/223 (10%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIK-ENEVIIITDSKSCLEKLKNTSKSNGNPSH-L 341
F L +I+TAE AI QAL ++ ++K E++ I +DS S L T+ SN + +H
Sbjct: 157 FGLPAQMSIYTAELIAIEQALIFIETMKDEDQFNICSDSLSSL-----TALSNCDITHPY 211
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD-- 399
+L I ++L V FIW H GI GNE DRLAK+ + P+P D
Sbjct: 212 LLSILTKQNNLVRKGKLVVFIWCPSHVGILGNEVADRLAKQAL--VMPVTKLPLPHTDYK 269
Query: 400 --VRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLR 457
+R+ + +W E + +NK + + + + P + R IV
Sbjct: 270 SPIRSYVKSLRQNEWDE----ETDNKLHTIQPVISEWKQGPQIDR----RGEIVLACACI 321
Query: 458 SNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVT 500
+ + YL + +AP C C + HI++ C ++++
Sbjct: 322 GHSHLTHGYLLRREVAP--FCIPCQSLLTVKHILIDCIDFEIS 362
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 195 DKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTAEAFAILQALKYASS 254
DK+P I+TDGSK++++VA AF T + F L +I+TAE AI QAL + +
Sbjct: 126 DKYPGIN-IYTDGSKSNDAVACAF--TCSTYQIQFGLPAQMSIYTAELIAIEQALIFIET 182
Query: 255 IKEKE 259
+K+++
Sbjct: 183 MKDED 187
>gi|307194212|gb|EFN76629.1| hypothetical protein EAI_07164 [Harpegnathos saltator]
Length = 110
Score = 62.8 bits (151), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
+ L +F ++F AE+FAIL L +S + +I +DS S L N+ G L+
Sbjct: 13 YHLSDFNSVFEAESFAILHTLVAISDSNCKKAVIASDSLSVL-TFFNSPDIKGKYHPLVY 71
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
+ + +L NI++ FIW+ H I GNEAVD LAKE
Sbjct: 72 MMRDIIHNLYLQNITIAFIWIPEHHNIPGNEAVDLLAKE 110
>gi|154270037|ref|XP_001535890.1| hypothetical protein HCAG_09166 [Ajellomyces capsulatus NAm1]
gi|150413780|gb|EDN09159.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 331
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
AT++ AE IL L + + I TD+++ L L+N +S+G ++ I AL
Sbjct: 53 ATVYAAELLGILMGLNLILTSDRRRAAIFTDNQAALRALQNPRRSSGQ--SILRRIIDAL 110
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
++ + V F W+ H GI GNE D+LA E
Sbjct: 111 ERVRSQGLQVEFYWIPAHQGIEGNELADKLAME 143
>gi|156050917|ref|XP_001591420.1| hypothetical protein SS1G_08046 [Sclerotinia sclerotiorum 1980]
gi|154692446|gb|EDN92184.1| hypothetical protein SS1G_08046 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1660
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S S G + KA
Sbjct: 1388 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDSPGQSCQI--KAIKAA 1445
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHE 409
+Q + WV GH + GNE D LAKE + + + + A M +
Sbjct: 1446 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSH------ETSYASIGMDIK 1499
Query: 410 IQWREN---VMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNH 460
EN +++ NN F++ T + PW + IP R I +L+ H
Sbjct: 1500 RMKSENWIAILNTNN----FHQPSSTYSRNYPWKISSKIRIPGNIKRSTICALFQLKIGH 1555
Query: 461 AICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 1556 GYFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 1593
>gi|154271075|ref|XP_001536391.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409614|gb|EDN05058.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1139
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
AT++ AE IL L + + I TD+++ L L+N +S+G ++ I AL
Sbjct: 861 ATVYAAELLGILMGLNLILTSDRRRAAIFTDNQAALRALQNPRRSSGQ--SILRRIIDAL 918
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
++ + V F W+ H GI GNE D+LA E
Sbjct: 919 ERVRSQGLQVEFYWIPAHQGIEGNELADKLAME 951
>gi|242825403|ref|XP_002488433.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712251|gb|EED11677.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 458
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 18/209 (8%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++L++T G L+L KA
Sbjct: 176 VFDAELVGVATALEWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQ--ALVLRAHKAAE 233
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 234 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEYLSLAHVRRAYTEARRA 293
Query: 410 I--QW-RENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAY 466
+W R N + + G + NL + K ++ + +L++ HA Y
Sbjct: 294 AVSEWARINAVQGRHRDGRW--NLDPVAGKAS--------KRLASRYYQLKTGHAPIGTY 343
Query: 467 LHKINIAPTNLCQECLE-REDMAHIILCC 494
LH+I + CQ C E E + H++ C
Sbjct: 344 LHRIGRRESPECQACKEPHETVRHMLFEC 372
>gi|328697366|ref|XP_003240318.1| PREDICTED: hypothetical protein LOC100575042 [Acyrthosiphon pisum]
Length = 891
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
KL +IF+AE +AI + +K ++++ N++++I+DS S L KNTS N S++
Sbjct: 177 KLPEITSIFSAENYAIFEGVKLANTLETNDILLISDSLSTLLAFKNTSPRNEITSNI--- 233
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP 392
+ L + ++ F+WV H GI GNE D+ A++ + LNP
Sbjct: 234 ----QACLVQSKKNIVFMWVPSHTGIIGNEKADKHAEQATQ--TILNP 275
>gi|326483666|gb|EGE07676.1| hypothetical protein TEQG_08765 [Trichophyton equinum CBS 127.97]
Length = 405
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 25/247 (10%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAI-------LQALKYVSSI--------KENEVII 317
I++ + + ++ L +F AE FAI L+A+K SS+ + E +
Sbjct: 112 IYNFRTSSYRSWGLGTDLEVFDAELFAIEQAFIKGLKAIKKSSSLINPLFIYSSKKEFWV 171
Query: 318 ITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVD 377
DS++ +++L+ + G + I + L++ + ++ +WV H I GNE D
Sbjct: 172 FIDSQAAIQRLQKSYLEGGE--MYVSRIRRIAKELKDRDYQIKIVWVPAHQNILGNEKAD 229
Query: 378 RLAKETARGTDAL----NPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTI 433
AK AR D+ N Y R + ++ E +W ++ + + +GL L
Sbjct: 230 FAAKLGARSRDSRDILKNKYTSLATIKRRIKEIALE-EWNQD-LEEKRKRGLGKDYLPFQ 287
Query: 434 TDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECL--EREDMAHII 491
T K +K L+K T ++L+ H ++YL ++ + CQ C ++E H++
Sbjct: 288 TTPKWQPSKDNWLKKLWSTRSQLKLGHGYFRSYLRRLPRYNSQACQACEGNQKETPTHLL 347
Query: 492 LCCPKYQ 498
L C Y+
Sbjct: 348 LLCSSYK 354
>gi|443682433|gb|ELT87030.1| hypothetical protein CAPTEDRAFT_222606 [Capitella teleta]
Length = 619
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 20/195 (10%)
Query: 291 TIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+++TAE AI + L ++ + +E +I TDS S + + + + + I + +
Sbjct: 30 SVYTAELIAINETLTSIALLPYDEFVICTDSFSSILAISSIDLIHS----YVQSILQKCT 85
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEI 410
+L + + FIW H GI GNE D LA++ A G + LN PIP D + +T E
Sbjct: 86 NLAGRDKRIIFIWCPSHVGIPGNETADTLAQQ-ASGMNILN-CPIPHTDFKPITRSFVET 143
Query: 411 QWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL----RKFIVTFNRLRSNHAICQAY 466
QW+ + NK + D +P P R+ + RLR H Y
Sbjct: 144 QWQSESDQETGNK---------LHDIEPDIGSWPPCQREKRRDEIVIARLRIGHTFL-TY 193
Query: 467 LHKINIAPTNLCQEC 481
H ++ +C C
Sbjct: 194 SHLLSGNDAPMCYGC 208
>gi|317031412|ref|XP_003188771.1| reverse transcriptase [Aspergillus niger CBS 513.88]
Length = 1653
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 291 TIFTAEAFAILQALKYVSSI----------KENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
++ AE IL A+ ++ I + V I++DS S L ++ +G
Sbjct: 1380 SVHAAELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQ--Q 1437
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
+I I +A + + +++R WV GH+ I GN+A DRLAKE A +P+ +
Sbjct: 1438 IIYAILQAAKNTRTHGVTIRLQWVPGHSEILGNDAADRLAKEAA-IPGKTHPFSPLLSRE 1496
Query: 401 RAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK-KPWFAKAIPL-RKFIVTFNRLRS 458
RA QW E ++ + G K T+ K A+P R +++T ++RS
Sbjct: 1497 RAYIRQGILTQW-EKEWKESRDGGHLRKIDNTLPAKYTRRLYGALPRNRAYLLT--QIRS 1553
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
H Y + C C RE + H++L CP
Sbjct: 1554 GHCWLSTYGKLFGFRDDDRCL-CGGRESIIHVLLDCP 1589
>gi|317031342|ref|XP_003188764.1| reverse transcriptase [Aspergillus niger CBS 513.88]
Length = 1016
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 291 TIFTAEAFAILQALKYVSSI----------KENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
++ AE IL A+ ++ I + V I++DS S L ++ +G
Sbjct: 743 SVHAAELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQ--Q 800
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
+I I +A + + +++R WV GH+ I GN+A DRLAKE A +P+ +
Sbjct: 801 IIYAILQAAKNTRTHGVTIRLQWVPGHSEILGNDAADRLAKEAA-IPGKTHPFSPLLSRE 859
Query: 401 RAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK-KPWFAKAIPL-RKFIVTFNRLRS 458
RA QW E ++ + G K T+ K A+P R +++T ++RS
Sbjct: 860 RAYIRQGILTQW-EKEWKESRDGGHLRKIDNTLPAKYTRRLYGALPRNRAYLLT--QIRS 916
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
H Y + C C RE + H++L CP
Sbjct: 917 GHCWLSTYGKLFGFRDDDRCL-CGGRESIIHVLLDCP 952
>gi|427781803|gb|JAA56353.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 26/224 (11%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
F+ + T AE A+ AL+ + + I TDSK L+ L+ T+ G L+L
Sbjct: 194 FRTSHKTTSTAAELAALRSALRRIDREVPLKWSIFTDSKPALQCLR-TALRRGPQDQLLL 252
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRA- 402
+I + L + + F W+ GH GI GNE D AK A + P P+ D A
Sbjct: 253 EIRQLYHQLTDKGHDITFQWLPGHCGITGNEHADDAAKN-AHENGVMEPIPLSRSDAAAK 311
Query: 403 VTDMQHEIQWRENVMSQNNNKGLFYKNL--------FTITDKKPWFAKAIPLRKFI-VTF 453
+ + H++ S N + L FT+ P + R ++ V+F
Sbjct: 312 INTLAHDV-----ARSMWNTPSFLHTRLHRLDPCLQFTVPSGLPRSETTVLCRMWLGVSF 366
Query: 454 NRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
A+ +I A + C+ C E + H++ CP+Y
Sbjct: 367 T---------NAFACRIGWADSAACEHCGTDETIQHVLCECPQY 401
>gi|242825810|ref|XP_002488515.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712333|gb|EED11759.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 488
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 15/187 (8%)
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNE 374
+ I++DSKS ++ +KN ++G +I I ++ L I +R W+ GH GN+
Sbjct: 238 ITILSDSKSAIQAIKNPRNTSGQ--RVIEAINQSAYELDSRGIPLRLQWIPGHCDDPGND 295
Query: 375 AVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFT-- 432
A D LAK A G ++P+ PV +A Q +W + + +NKG + + T
Sbjct: 296 AADCLAK-AAVGPTKIHPFCRPVSREKAAIRRQILKEWEDEW--KTSNKGTHLRRIDTKL 352
Query: 433 --ITDKKPWFAKAIPL-RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAH 489
I ++ +++P R +++T +LR+ H+ + + + C EC +E + H
Sbjct: 353 PAIRSRR--LYQSLPRNRAYLLT--QLRTGHSWLATHGKALRHREDDKC-ECGAKETVVH 407
Query: 490 IILCCPK 496
I++ CP+
Sbjct: 408 ILIDCPR 414
>gi|317031356|ref|XP_001393251.2| reverse transcriptase [Aspergillus niger CBS 513.88]
Length = 1677
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 291 TIFTAEAFAILQALKYVSSI----------KENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
++ AE IL A+ ++ I + V I++DS S L ++ +G
Sbjct: 1417 SVHAAELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQ--Q 1474
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
+I I +A + + +++R WV GH+ I GN+A DRLAKE A +P+ +
Sbjct: 1475 IIYAILQAAKNTRTHGVTIRLQWVPGHSEILGNDAADRLAKEAA-IPGKTHPFSPLLSRE 1533
Query: 401 RAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK-KPWFAKAIPL-RKFIVTFNRLRS 458
RA QW E ++ + G K T+ K A+P R +++T ++RS
Sbjct: 1534 RAYIRQGILTQW-EKEWKESRDGGHLRKIDNTLPAKYTRRLYGALPRNRAYLLT--QIRS 1590
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
H Y + C C RE + H++L CP
Sbjct: 1591 GHCWLSTYGKLFGFRDDDRCL-CGGRESIIHVLLDCP 1626
>gi|427779533|gb|JAA55218.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 482
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 26/224 (11%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
F+ + T AE A+ AL+ + + I TDSK L+ L+ T+ G L+L
Sbjct: 221 FRTSHKTTSTAAELAALRSALRRIDREVPLKWSIFTDSKPALQCLR-TALRRGPQDQLLL 279
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRA- 402
+I + L + + F W+ GH GI GNE D AK A + P P+ D A
Sbjct: 280 EIRQLYHQLTDKGHDITFQWLPGHCGITGNEHADDAAKN-AHENGVMEPIPLSRSDAAAK 338
Query: 403 VTDMQHEIQWRENVMSQNNNKGLFYKNL--------FTITDKKPWFAKAIPLRKFI-VTF 453
+ + H++ S N + L FT+ P + R ++ V+F
Sbjct: 339 INTLAHDV-----ARSMWNTPSFLHTRLHRLDPCLQFTVPSGLPRSETTVLCRMWLGVSF 393
Query: 454 NRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
A+ +I A + C+ C E + H++ CP+Y
Sbjct: 394 T---------NAFACRIGWADSAACEHCGTDETIQHVLCECPQY 428
>gi|134077855|emb|CAK40096.1| unnamed protein product [Aspergillus niger]
Length = 1244
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 291 TIFTAEAFAILQALKYVSSI----------KENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
++ AE IL A+ ++ I + V I++DS S L ++ +G
Sbjct: 971 SVHAAELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQ--Q 1028
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
+I I +A + + +++R WV GH+ I GN+A DRLAKE A +P+ +
Sbjct: 1029 IIYAILQAAKNTRTHGVTIRLQWVPGHSEILGNDAADRLAKEAA-IPGKTHPFSPLLSRE 1087
Query: 401 RAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK-KPWFAKAIPL-RKFIVTFNRLRS 458
RA QW E ++ + G K T+ K A+P R +++T ++RS
Sbjct: 1088 RAYIRQGILTQW-EKEWKESRDGGHLRKIDNTLPAKYTRRLYGALPRNRAYLLT--QIRS 1144
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
H Y + C C RE + H++L CP
Sbjct: 1145 GHCWLSTYGKLFGFRDDDRCL-CGGRESIIHVLLDCP 1180
>gi|74835158|dbj|BAE44464.1| non-LTR retrotransposon CATS [Bombyx mori]
Length = 809
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 28/236 (11%)
Query: 270 SLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK 329
S+W T + KL ++ T++ AE A+L+A + V S I D++S L+ +
Sbjct: 540 SIW-EGTGEIKTKKLKLGSYCTVYQAELLALLKATEEVLSGGAATYNIFCDARSTLDVI- 597
Query: 330 NTSKSNGNPSH-LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
++G H L I K L + E N +R W++ H G+ GNE D LAKE A
Sbjct: 598 ----ASGESLHPLAFKITKNLKTITERNQEIRLFWIKAHIGLEGNERADVLAKEAALSLK 653
Query: 389 ALNPYP-IPVQDVRAVTDMQHEIQW--RENVMSQNNNKGLFYKNL---FTITDKKPWFAK 442
Y PV + +W R S + +F+ N+ ++I
Sbjct: 654 CKPHYDRCPVSFAKRTIRQGSVDEWDLRYTTESTASVTKIFFPNVKSSYSI--------- 704
Query: 443 AIPLRKFIV--TFNRLRSNHAICQAYLHKINIAPTNLCQ-ECLEREDMAHIILCCP 495
+R+ V T ++ + H YLH+ + C + + +E + H+++ CP
Sbjct: 705 ---IRRLEVDSTLTQVFTGHGGLSQYLHRFRCKESPACVCDPVNQESIVHVLIECP 757
>gi|331249489|ref|XP_003337361.1| hypothetical protein PGTG_18955 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 313
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 29/234 (12%)
Query: 283 TFKLKNFATI--FTAEAFAILQALKYVSSI-------KENEVIIITDSKSCLEKLKNTSK 333
+ K+ N +I + AE I A++ + I + V I +D++ L + + S+
Sbjct: 32 SVKISNHHSISNYEAELVGIGIAIRLIKKIIWSAWPGRFKAVAIFSDNQGALIRTADPSQ 91
Query: 334 SNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD----- 388
+ HL D F +L +L + V W GH GI NE D++AK + ++
Sbjct: 92 PSPG-QHLYADNFSSLRNL---GLPVSLYWCPGHEGITANEQADKMAKSEVQLSEKEITS 147
Query: 389 -ALNPYPIPVQDVRAVTDMQHEIQW-RENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL 446
AL+ IP + T + W R ++S K ++ D +P A
Sbjct: 148 TALS-RQIPASLSK--TKQNSKPMWDRGPLLSPEEQKRFRFR-----PDPRPIIAALEEQ 199
Query: 447 RKFIV-TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
K I T +LR++HA +L KI C CLERE H ++ C KY+
Sbjct: 200 AKGITATILQLRADHAPLNHFLFKIKQVLDPRCTNCLERESAPHFLMFCKKYRT 253
>gi|242825350|ref|XP_002488422.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712240|gb|EED11666.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1998
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + + D+++ +++L++T G L+L KA
Sbjct: 1709 VFDAELVGVATALEWALERQPLGPIWVFLDAQNAIDRLRSTRPGPGQA--LVLRAHKAAE 1766
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 1767 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 1826
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 1827 AVSEWAQINAVQGRHRYGRVYKMPRGWNLDPVAGKAP--------KRLASRYYQLKTGHA 1878
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 1879 PIGTYLYRIGRRESPECQACKEPHETVRHVLFEC 1912
>gi|212532171|ref|XP_002146242.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210071606|gb|EEA25695.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 358
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKY-VSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++L++T G L L A S
Sbjct: 72 VFDAELMGVASALEWALERHLPGPIHVLLDAQNAIKRLQSTEPGAGQ--SLALRAHMAAS 129
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L+ V WV GH G+ GNE D+ AK A + + V RA T+ +
Sbjct: 130 RLRLSGRPVTIQWVPGHNGVEGNEQADQAAKPAASKPAGPGFEGLSLAYVRRACTEARRA 189
Query: 410 I--QW-RENVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
W REN + + +G YK L I K P ++ + +L++ HA
Sbjct: 190 AVENWARENAVQGAHRRGRAYKMPRGWGLDRIGAKAP--------KRVASRYYQLKTGHA 241
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YLH+I + C+ C E RE ++HI+ C
Sbjct: 242 PIGTYLHRIKARDSPECRACGELRETVSHILFKC 275
>gi|443713753|gb|ELU06453.1| hypothetical protein CAPTEDRAFT_215116 [Capitella teleta]
Length = 266
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 63/230 (27%)
Query: 195 DKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTAEAFAILQALKYASS 254
D +P + + +TDGSK+ +SVA +F+ S KL+
Sbjct: 70 DSYPVSTVFYTDGSKSEDSVARSFF------SSRLKLK---------------------- 101
Query: 255 IKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKE-N 313
KL ++FT+E AIL ALK + + E +
Sbjct: 102 -----------------------------MKLPVQMSVFTSEIIAILSALKCLEADNEQH 132
Query: 314 EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGN 373
+ +I +DS S + + + +L + A+ + + V F+W H GI GN
Sbjct: 133 QFVICSDSLSAIMAIHGMDVHHP----YVLQVLYAIKSISQQEKIVVFMWCPSHVGIPGN 188
Query: 374 EAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNK 423
E LA++ T+ L P+P D+R + QW+ Q+NNK
Sbjct: 189 EMAHTLAEKALSSTN-LAELPVPASDLRGLIKKYIRSQWQHEWEEQHNNK 237
>gi|83776064|dbj|BAE66183.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1301
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 20/255 (7%)
Query: 253 SSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYV----- 307
+S ++ + G V++ ++ I ++ + G+ ++ +++ AE AI A+ V
Sbjct: 979 ASGQQNQLGAAAVALDKNQQILGSRQISIGSM---SYWSVYAAELMAIYYAIGLVFQLAQ 1035
Query: 308 -----SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFI 362
++ I++DS S L+ + N +G ++ I +A L+ I +R
Sbjct: 1036 KNQTTATTTRGPATILSDSMSALQAIANAWNKSGQ--RILQAIHQAAGELKARGIPLRLQ 1093
Query: 363 WVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNN 422
WV GH G GNE DRLAKE A G + +P+ + + + +W + +
Sbjct: 1094 WVPGHCGDPGNETADRLAKE-AVGLEKKHPFRHLLSREKGYIRDRISKEWEQEWRTSKKG 1152
Query: 423 KGLFYKNLFTITDKKPWFAKAIPL-RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQEC 481
L + + + ++P R +++T +LR+ H+ Y + C EC
Sbjct: 1153 GHLRKIDRTLPSSRTRRLYGSLPRNRAYLLT--QLRTGHSWLATYGKQHRFQEEEKC-EC 1209
Query: 482 LEREDMAHIILCCPK 496
E + H+++ CP+
Sbjct: 1210 GAVETVVHVLIDCPR 1224
>gi|242786294|ref|XP_002480777.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218720924|gb|EED20343.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1998
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++L++T G L+L +A
Sbjct: 1709 VFDAELVGVATALEWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQA--LVLRAHRAAE 1766
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 1767 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 1826
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 1827 AVSEWAQINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRVASRYYQLKTGHA 1878
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 1879 PIGTYLYRIGQRESPECQACKEPHETVRHVLFEC 1912
>gi|242794549|ref|XP_002482398.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218718986|gb|EED18406.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 2069
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++L++T G L+L +A
Sbjct: 1780 VFDAELVGVATALEWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQA--LVLRAHRAAE 1837
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 1838 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 1897
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+W + N + + G YK NL + K P ++ + +L++ HA
Sbjct: 1898 AVSEWAQINAVQGRHRDGRVYKMPRGWNLDPVAGKAP--------KRVASRYYQLKTGHA 1949
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YL++I + CQ C E E + H++ C
Sbjct: 1950 PIGTYLYRIGQRESPECQACKEPHETVRHVLFEC 1983
>gi|156062764|ref|XP_001597304.1| hypothetical protein SS1G_01498 [Sclerotinia sclerotiorum 1980]
gi|154696834|gb|EDN96572.1| hypothetical protein SS1G_01498 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1387
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G + KA
Sbjct: 1115 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAA 1172
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 1173 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYASIGMDIKR---MK 1229
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + IP R I +L+ H
Sbjct: 1230 SE-NWI-TILNTNN----FHQPSSTYSRNYPWKISSKIRIPGNIKRSTICALFQLKIGHG 1283
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 1284 YFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 1320
>gi|134077756|emb|CAK45797.1| unnamed protein product [Aspergillus niger]
Length = 1536
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 291 TIFTAEAFAILQALKYVSSI----------KENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
++ AE IL A+ ++ I + V I++DS S L ++ +G
Sbjct: 1263 SVHAAELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQ--Q 1320
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
+I I +A + + +++R WV GH+ I GN+A DRLAKE A +P+ +
Sbjct: 1321 IIYAILQAAKNTRTHGVTIRLQWVPGHSEILGNDAADRLAKEAA-IPGKTHPFSPLLSRE 1379
Query: 401 RAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK-KPWFAKAIPL-RKFIVTFNRLRS 458
RA QW E ++ + G K T+ K A+P R +++T ++RS
Sbjct: 1380 RAYIRQGILTQW-EKEWKESRDGGHLRKIDNTLPAKYTRRLYGALPRNRAYLLT--QIRS 1436
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
H Y + C C RE + H++L CP
Sbjct: 1437 GHCWLSTYGKLFGFRDDDRCL-CGGRESIIHVLLDCP 1472
>gi|134077781|emb|CAK45821.1| unnamed protein product [Aspergillus niger]
Length = 1644
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 291 TIFTAEAFAILQALKYVSSI----------KENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
++ AE IL A+ ++ I + V I++DS S L ++ +G
Sbjct: 1371 SVHAAELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQ--Q 1428
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
+I I +A + + +++R WV GH+ I GN+A DRLAKE A +P+ +
Sbjct: 1429 IIYAILQAAKNTRTHGVTIRLQWVPGHSEILGNDAADRLAKEAA-IPGKTHPFSPLLSRE 1487
Query: 401 RAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK-KPWFAKAIPL-RKFIVTFNRLRS 458
RA QW E ++ + G K T+ K A+P R +++T ++RS
Sbjct: 1488 RAYIRQGILTQW-EKEWKESRDGGHLRKIDNTLPAKYTRRLYGALPRNRAYLLT--QIRS 1544
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
H Y + C C RE + H++L CP
Sbjct: 1545 GHCWLSTYGKLFGFRDDDRCL-CGGRESIIHVLLDCP 1580
>gi|358376848|dbj|GAA93341.1| transposon I factor, partial [Aspergillus kawachii IFO 4308]
Length = 595
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 23/239 (9%)
Query: 273 IFDTQNKNSGTFKLKNFA----TIFTAEAFAILQALKYVSSI----------KENEVIII 318
+ D + +G+ +++ ++ AE IL A+ ++ I + V I+
Sbjct: 302 VLDDASITTGSLQIQVGPMGQWSVHAAELIGILYAINLINRIVLQQRRAGQKRARTVTIL 361
Query: 319 TDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDR 378
+DS S L ++ +G +I I +A + + +++R WV GH+ I GN+ DR
Sbjct: 362 SDSMSALLAIQKPGNKSGQ--QIIYAILQAAKNTRTHGVTIRLQWVPGHSEILGNDTADR 419
Query: 379 LAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK-- 436
LAKE A +P+ + RA QW E ++ + G K T+ K
Sbjct: 420 LAKEAA-IPGKTHPFSPLLSRERAYIRQGILTQW-EKEWKESRDGGHLRKIDNTLPAKYT 477
Query: 437 KPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
+ + R +++T ++RS H Y + C C ERE + H++L CP
Sbjct: 478 RRLYGSLPRNRAYLLT--QIRSGHCWLSTYGKLFGFHDDDRCL-CGERESILHVLLDCP 533
>gi|156051534|ref|XP_001591728.1| hypothetical protein SS1G_07174 [Sclerotinia sclerotiorum 1980]
gi|154704952|gb|EDO04691.1| hypothetical protein SS1G_07174 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 947
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G + KA
Sbjct: 676 VYNGELLGVAKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAA 733
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 734 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYASIGMDIK---RMK 790
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + IP R I +L+ H
Sbjct: 791 SE-NWI-TILNTNN----FHQPSSTYSRNYPWKISSKIRIPGNIKRSTICALFQLKIGHG 844
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 845 YFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 881
>gi|317159440|ref|XP_001827316.2| reverse transcriptase [Aspergillus oryzae RIB40]
Length = 1607
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 20/255 (7%)
Query: 253 SSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYV----- 307
+S ++ + G V++ ++ I ++ + G+ ++ +++ AE AI A+ V
Sbjct: 1285 ASGQQNQLGAAAVALDKNQQILGSRQISIGSM---SYWSVYAAELMAIYYAIGLVFQLAQ 1341
Query: 308 -----SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFI 362
++ I++DS S L+ + N +G ++ I +A L+ I +R
Sbjct: 1342 KNQTTATTTRGPATILSDSMSALQAIANAWNKSGQ--RILQAIHQAAGELKARGIPLRLQ 1399
Query: 363 WVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNN 422
WV GH G GNE DRLAKE A G + +P+ + + + +W + +
Sbjct: 1400 WVPGHCGDPGNETADRLAKE-AVGLEKKHPFRHLLSREKGYIRDRISKEWEQEWRTSKKG 1458
Query: 423 KGLFYKNLFTITDKKPWFAKAIPL-RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQEC 481
L + + + ++P R +++T +LR+ H+ Y + C EC
Sbjct: 1459 GHLRKIDRTLPSSRTRRLYGSLPRNRAYLLT--QLRTGHSWLATYGKQHRFQEEEKC-EC 1515
Query: 482 LEREDMAHIILCCPK 496
E + H+++ CP+
Sbjct: 1516 GAVETVVHVLIDCPR 1530
>gi|443710566|gb|ELU04776.1| hypothetical protein CAPTEDRAFT_186063 [Capitella teleta]
Length = 377
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 274 FDTQNKNSGTFKLKNFATIFTAEAFAILQALKYV--SSIKENEVIIITDSKSCLEKLKNT 331
F T + S +L + A+IF+AE AI Q L + S+ + + +I TDS S L+ +
Sbjct: 203 FATADNLSIQIRLPDSASIFSAELLAIYQVLTLLECSANDQQQFLIATDSLSSLQAI--- 259
Query: 332 SKSNGNPSH-LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
N N H + I + + L + I + W H G+ GNE D LAKE T
Sbjct: 260 --GNFNIKHPYVFKILEKCTLLHKKGIYLVMAWCPSHVGVMGNERADLLAKEALSFTTCT 317
Query: 391 NPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNK 423
IP D + +T + +W+E S+ NK
Sbjct: 318 --IRIPSSDFKPITHEFFKEKWQEQWSSEQENK 348
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 181 PEYAKQNCFLNEVKDKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTA 240
P Y +N F N + DK+P+ +IFTDGSK+ +VA + T + S +L + A+IF+A
Sbjct: 168 PNYTLKNEFYN-LMDKYPDHKVIFTDGSKSDSAVAC--FATADNLSIQIRLPDSASIFSA 224
Query: 241 EAFAILQAL 249
E AI Q L
Sbjct: 225 ELLAIYQVL 233
>gi|317156031|ref|XP_003190671.1| reverse transcriptase [Aspergillus oryzae RIB40]
Length = 1607
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 20/255 (7%)
Query: 253 SSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYV----- 307
+S ++ + G V++ ++ I ++ + G+ ++ +++ AE AI A+ V
Sbjct: 1285 ASGQQNQLGAAAVALDKNQQILGSRQISIGSM---SYWSVYAAELMAIYYAIGLVFQLAQ 1341
Query: 308 -----SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFI 362
++ I++DS S L+ + N +G ++ I +A L+ I +R
Sbjct: 1342 KNQTTATTTRGPATILSDSMSALQAIANAWNKSGQ--RILQAIHQAAGELKARGIPLRLQ 1399
Query: 363 WVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNN 422
WV GH G GNE DRLAKE A G + +P+ + + + +W + +
Sbjct: 1400 WVPGHCGDPGNETADRLAKE-AVGLEKKHPFRHLLSREKGYIRDRISKEWEQEWRTSKKG 1458
Query: 423 KGLFYKNLFTITDKKPWFAKAIPL-RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQEC 481
L + + + ++P R +++T +LR+ H+ Y + C EC
Sbjct: 1459 GHLRKIDRTLPSSRTRRLYGSLPRNRAYLLT--QLRTGHSWLATYGKQHRFQEEEKC-EC 1515
Query: 482 LEREDMAHIILCCPK 496
E + H+++ CP+
Sbjct: 1516 GAVETVVHVLIDCPR 1530
>gi|156060559|ref|XP_001596202.1| hypothetical protein SS1G_02418 [Sclerotinia sclerotiorum 1980]
gi|154699826|gb|EDN99564.1| hypothetical protein SS1G_02418 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 487
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G + KA
Sbjct: 215 VYNGELLEVTKAIEYTNSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAA 272
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHE 409
+Q + WV GH + GNE D LAKE + + + + A M +
Sbjct: 273 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSH------ETSYASIGMDIK 326
Query: 410 IQWREN---VMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNH 460
EN +++ NN F++ T + PW + +P R I +L+ H
Sbjct: 327 RMKSENWIAILNTNN----FHQPSSTYSRNYPWKISSKIRVPGNIKRSTICALFQLKIGH 382
Query: 461 AICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 383 GYFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 420
>gi|156039259|ref|XP_001586737.1| hypothetical protein SS1G_11766 [Sclerotinia sclerotiorum 1980]
gi|154697503|gb|EDN97241.1| hypothetical protein SS1G_11766 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1232
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G + KA
Sbjct: 960 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAA 1017
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 1018 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYASIGMDIK---RMK 1074
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + IP R I +L+ H
Sbjct: 1075 SE-NWIA-ILNTNN----FHQPSSTYSRNYPWKISSKIRIPGNIKRSTICALFQLKIGHG 1128
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 1129 YFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 1165
>gi|156056264|ref|XP_001594056.1| hypothetical protein SS1G_05484 [Sclerotinia sclerotiorum 1980]
gi|154703268|gb|EDO03007.1| hypothetical protein SS1G_05484 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1584
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y + I + N+ I +D+++ L +LK S S G + KA
Sbjct: 1312 VYNGELLGVTKAIEYANLIAQPGNKFKIYSDNQAGLFRLKTPSDSPGQSCQI--KAIKAA 1369
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 1370 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYAFIGMDIKR---MK 1426
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + +P R I +L+ H
Sbjct: 1427 SE-NWIA-ILNTNN----FHQPSSTYSRNYPWKISSKIRVPGNIKRSTICALFQLKIGHG 1480
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 1481 YFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 1517
>gi|83774376|dbj|BAE64500.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1292
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 106/252 (42%), Gaps = 35/252 (13%)
Query: 291 TIFTAEAFAILQA----LKYVSS-------IKENEVIIITDSKSCLEKLKNTSKSNGNPS 339
+++ AE I A LK VSS ++ I+ DS S L+ ++N +G
Sbjct: 1015 SVYAAELIGIFYAISLVLKIVSSRPRTPTTSQQEPATILCDSMSALQAIRNPGNKSGQ-- 1072
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD 399
+I +A + L+ I +R W+ GH GN+A D+LA+ A G D ++P+P V
Sbjct: 1073 RIIHANLQAAAELKARGIPLRLQWIPGHCDDPGNDAADKLAR-MAVGLDKMHPFPRLVSQ 1131
Query: 400 VRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNR---- 455
RA Q +W + KG +L I K P AI R+ + R
Sbjct: 1132 ERASIRKQILKEWEHEW--KTCKKG---SHLRRIDPKLP----AIRTRRLYDSLPRNQAY 1182
Query: 456 ----LRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVT---LAIALVGS 508
LR+ H Y + C EC +E + H++L C K ++ L L +
Sbjct: 1183 LLTQLRTGHCWLAPYGKLHGHREDDKC-ECGAKETVTHVLLDCSKLRIPRQKLRRELGEA 1241
Query: 509 GQDARLVNGGRG 520
D + GG+G
Sbjct: 1242 FGDIPAMLGGKG 1253
>gi|317156327|ref|XP_001825633.2| reverse transcriptase [Aspergillus oryzae RIB40]
Length = 1393
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 32/228 (14%)
Query: 291 TIFTAEAFAILQA----LKYVSS-------IKENEVIIITDSKSCLEKLKNTSKSNGNPS 339
+++ AE I A LK VSS ++ I+ DS S L+ ++N +G
Sbjct: 1116 SVYAAELIGIFYAISLVLKIVSSRPRTPTTSQQEPATILCDSMSALQAIRNPGNKSGQ-- 1173
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD 399
+I +A + L+ I +R W+ GH GN+A D+LA+ A G D ++P+P V
Sbjct: 1174 RIIHANLQAAAELKARGIPLRLQWIPGHCDDPGNDAADKLAR-MAVGLDKMHPFPRLVSQ 1232
Query: 400 VRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNR---- 455
RA Q +W + KG +L I K P AI R+ + R
Sbjct: 1233 ERASIRKQILKEWEHEW--KTCKKG---SHLRRIDPKLP----AIRTRRLYDSLPRNQAY 1283
Query: 456 ----LRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
LR+ H Y + C EC +E + H++L C K ++
Sbjct: 1284 LLTQLRTGHCWLAPYGKLHGHREDDKC-ECGAKETVTHVLLDCSKLRI 1330
>gi|321456611|gb|EFX67714.1| hypothetical protein DAPPUDRAFT_330770 [Daphnia pulex]
Length = 316
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 113/272 (41%), Gaps = 32/272 (11%)
Query: 239 TAEAFAILQALKYASSIKEKEAGYCKVSIRESLW--IFDTQNKNSGTFKLKNFATIFTAE 296
T F L + A+SI+ G K S +E+ IF + L ++IFTAE
Sbjct: 7 TTSPFNTLDSSAPATSIRAYTDG-SKSSSQETTTCAIFIPALNKEHVWTLTKGSSIFTAE 65
Query: 297 AFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AI QALK + + E II +DS S + + + S S I + +S L+
Sbjct: 66 VTAIYQALKLFYDMDDCPPEAIIYSDSSSAITAISSNSLSEN---EAITATREIISSLKS 122
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD------ALNPYPIPVQDVRAVTDMQH 408
R W+ H GI GNE DRLA D +L+P + V +RA
Sbjct: 123 SGTRTRLTWIPSHTGIEGNERADRLAATECNTQDGEEVHNSLSPKEM-VSIIRA------ 175
Query: 409 EIQWRENVMSQNNNKGLFYKNLFTITDKK---PWFAKAIPLRKFIVTFNRLRSNHAICQA 465
W N++ N+ K+ + ++ W P R+ + +RLRS H A
Sbjct: 176 --NWATNLL---RNQKTCKKSCIQMRSRQGTIKWHQH--PNRQVAICLHRLRSGHNRLNA 228
Query: 466 YLHKINIAPTNLCQ-ECLEREDMAHIILCCPK 496
+ H+I+ C+ C E+ HI+ C +
Sbjct: 229 FSHRIDPEADPSCRVGCAAIENARHILESCSR 260
>gi|156056779|ref|XP_001594313.1| hypothetical protein SS1G_04120 [Sclerotinia sclerotiorum 1980]
gi|154701906|gb|EDO01645.1| hypothetical protein SS1G_04120 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1114
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G + KA
Sbjct: 842 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAA 899
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 900 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYASIGMDIK---RMK 956
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + +P R I +L+ H
Sbjct: 957 SE-NWIA-ILNTNN----FHQPSSTYSRNYPWKISSKIRVPGNIKRSTICALFQLKIGHG 1010
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 1011 YFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 1047
>gi|156034873|ref|XP_001585855.1| hypothetical protein SS1G_13372 [Sclerotinia sclerotiorum 1980]
gi|154698775|gb|EDN98513.1| hypothetical protein SS1G_13372 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 731
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G + KA
Sbjct: 460 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAA 517
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 518 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYASIGMDIK---RMK 574
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + +P R I +L+ H
Sbjct: 575 SE-NWIA-ILNTNN----FHQPSSTYSRNYPWKISSKIRVPGNIKRSTICALFQLKIGHG 628
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 629 YFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 665
>gi|242805368|ref|XP_002484512.1| hypothetical protein TSTA_040390 [Talaromyces stipitatus ATCC
10500]
gi|218715137|gb|EED14559.1| hypothetical protein TSTA_040390 [Talaromyces stipitatus ATCC
10500]
Length = 319
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 14/223 (6%)
Query: 287 KNFATIFTAEAFAILQALKYVSSIKENEV-------IIITDSKSCLEKLKNTSKSNGNPS 339
++ +T++ AEA I AL+ V + E V +I +DS++ L+ L+N +G
Sbjct: 48 EDTSTVYAAEACGIKFALQIVLWLAEESVRLIVRKPVIFSDSQAVLQTLQNPRMVSGQV- 106
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA--RGTDALNPYPIPV 397
I D + L E I+V W+ GH G+ GNE DR AK A + P I
Sbjct: 107 -YIRDCVELLKECIEEGINVEIRWIPGHEGVPGNETADRAAKRAAFVGARHQVVPRDIKN 165
Query: 398 QDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP--LRKFIVT-FN 454
+ A + Q +N ++ +K K + K W A LRK +
Sbjct: 166 WTMLAAAAKRRVCQSAKNAWERSWDKQKAGKPTKKLVTKPSWQTLAYWNYLRKATSSILI 225
Query: 455 RLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+LR+ YL +IN C+ L + HI++ CP Y
Sbjct: 226 QLRTERVGLAHYLWRINRHDRLYCECGLSGHTVRHILMECPIY 268
>gi|156033247|ref|XP_001585460.1| predicted protein [Sclerotinia sclerotiorum 1980]
gi|154699102|gb|EDN98840.1| predicted protein [Sclerotinia sclerotiorum 1980 UF-70]
Length = 358
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 20/246 (8%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIII 318
G V+I+ + I + N GT +L ++ E F + +A++Y SSI + I
Sbjct: 40 GVGIVAIQSNNRILYQERSNIGTNQL-----VYNGELFGVTRAIEYASSIAYTGQKFKIY 94
Query: 319 TDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDR 378
+D+++ L +LK S G + + KA ++ + WV GH + GNE D+
Sbjct: 95 SDNQAGLYRLKTPSDHPGQANQI--RAIKAAEVIRAKGAEISLNWVPGHTSVEGNELADK 152
Query: 379 LAKE--TARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMS---QNNNKGLFYKNLFTI 433
LAKE T + T + + V+ QW + + ++N Y LF+
Sbjct: 153 LAKEATTIQPTSNETSFGLLGMTVKEYASD----QWLDTLKQYELRSNQSPSTYSKLFSW 208
Query: 434 TDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
+ R F +L+ H ++YLH+ + N C C E H+++
Sbjct: 209 KIGSKIKLPSGTTRNTASAFFQLKLGHGYIKSYLHRFKLT-NNKCI-CSNIEAPQHLLIS 266
Query: 494 CPKYQV 499
CP Y+
Sbjct: 267 CPIYKT 272
>gi|156032517|ref|XP_001585096.1| hypothetical protein SS1G_13956 [Sclerotinia sclerotiorum 1980]
gi|154699358|gb|EDN99096.1| hypothetical protein SS1G_13956 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1326
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G + KA
Sbjct: 1054 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAA 1111
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 1112 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYASIGMDIKR---MK 1168
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + +P R I +L+ H
Sbjct: 1169 SE-NWIA-ILNTNN----FHQPSSTYSRNYPWKISSKIRVPGNIKRSTICALFQLKIGHG 1222
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y++
Sbjct: 1223 YFKSYLKRFGISSNDNCR-CGGKESPDHLLLSCPLYKM 1259
>gi|156043557|ref|XP_001588335.1| hypothetical protein SS1G_10782 [Sclerotinia sclerotiorum 1980]
gi|154695169|gb|EDN94907.1| hypothetical protein SS1G_10782 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 674
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 32/252 (12%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIII 318
G V+I+ + I + N GT +L ++ E F + +A++Y SSI + I
Sbjct: 357 GVGIVAIQSNNRILYQERSNIGTNQL-----VYNGELFGVTRAIEYASSIAYTGQKFKIY 411
Query: 319 TDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDR 378
+D+++ L +LK S G + + KA ++ + WV GH + GNE D+
Sbjct: 412 SDNQAGLYRLKTPSDHPGQANQI--RAIKAAEVIRAKGAEISLNWVPGHTSVEGNELADK 469
Query: 379 LAKE--TARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMS---QNNNKGLFYKNLFTI 433
LAKE T + T + + V+ QW + + ++N Y LF
Sbjct: 470 LAKEATTIQPTSNETSFGLLGMTVKEYASD----QWLDTLKQYELRSNQSPSTYSKLF-- 523
Query: 434 TDKKPW-FAKAIPL-----RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDM 487
PW I L R F +L+ H ++YLH+ + N C C E
Sbjct: 524 ----PWKIGSKIKLPSGTTRNTASAFFQLKLGHGYIKSYLHRFKLT-NNKCI-CSNIEAP 577
Query: 488 AHIILCCPKYQV 499
H+++ CP Y+
Sbjct: 578 QHLLISCPIYKT 589
>gi|270002674|gb|EEZ99121.1| hypothetical protein TcasGA2_TC005227 [Tribolium castaneum]
Length = 321
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 21/159 (13%)
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTD 405
K ++Q +V IWV H GI NE D++AK+ + YP+ TD
Sbjct: 141 IKKFKNIQTAEKAVHLIWVPAHYGIEENEHADQIAKQVPEDQEPERLYPV-------YTD 193
Query: 406 MQHEIQWRE-NVMSQNNNKGL-----FYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSN 459
+Q I+ + N+ Q+ N+ Y N+ K W + + R VT NRLR
Sbjct: 194 VQQTIRTKHANLFQQHWNQSTAKLREAYPNI------KKWASSNLK-RGEEVTINRLRLR 246
Query: 460 HAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
H H + P C C ER + HI+L CPKY
Sbjct: 247 HTRLTQEYHLKKVDPPTCCY-CEERLTVRHILLECPKYH 284
>gi|154280491|ref|XP_001541058.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411237|gb|EDN06625.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1765
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 291 TIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
T++ AE I L + + I TD+++ L+ L+N +S+G ++ I AL
Sbjct: 1488 TVYAAELLGIHMGLNLILASDRRRAAIFTDNQAALKALQNPRRSSGQ--SILRRIIDALD 1545
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
++ + V F W+ H GI GNE D LAKE
Sbjct: 1546 RVRSQGLQVEFYWIPAHQGIEGNELADNLAKE 1577
>gi|154283453|ref|XP_001542522.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410702|gb|EDN06090.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1683
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 291 TIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
T++ AE I L + + I TD+++ L+ L+N +S+G ++ I AL
Sbjct: 1474 TVYAAELLGIHMGLNLILASDRRRAAIFTDNQAALKALQNPRRSSGQ--SILRRIIDALD 1531
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
++ + V F W+ H GI GNE D LAKE
Sbjct: 1532 RVRSQGLQVEFYWIPAHQGIEGNELADNLAKE 1563
>gi|154284199|ref|XP_001542895.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411075|gb|EDN06463.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1776
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 291 TIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
T++ AE I L + + I TD+++ L+ L+N +S+G ++ I AL
Sbjct: 1499 TVYAAELLGIHMGLNLILASDRRRAAIFTDNQAALKALQNPRRSSGQ--SILRRIIDALD 1556
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
++ + V F W+ H GI GNE D LAKE
Sbjct: 1557 RVRAQGLQVEFYWIPAHQGIEGNELADNLAKE 1588
>gi|443700898|gb|ELT99633.1| hypothetical protein CAPTEDRAFT_212630, partial [Capitella teleta]
Length = 300
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 285 KLKNFATIFTAEAFAILQALKYV--SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH-L 341
+L + A+IF+AE AI Q L + S+ + + +I TDS S L+ + N N H
Sbjct: 145 RLPDSASIFSAELLAIYQVLTLLECSANDQQQFLIATDSLSSLQAI-----GNFNIKHPY 199
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
+ I + + L + I + W H G+ GNE D LAKE T +P D +
Sbjct: 200 VFKILQKCTLLHKKGIYLVMAWCPSHVGVMGNERADLLAKEALSFTTCT--IRVPSSDFK 257
Query: 402 AVTDMQHEIQWRENVMSQNNNK 423
+T ++ +W+E S+ NK
Sbjct: 258 PITHEFYKEKWQEQWSSEQENK 279
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 181 PEYAKQNCFLNEVKDKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTA 240
P Y +N F N + DK+P+ +IFTDGSK+ +VA + T + +L + A+IF+A
Sbjct: 99 PNYTLRNEFYN-LMDKYPDHKVIFTDGSKSDSAVACS--ATADNLRIQIRLPDSASIFSA 155
Query: 241 EAFAILQAL 249
E AI Q L
Sbjct: 156 ELLAIYQVL 164
>gi|154272341|ref|XP_001537023.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409010|gb|EDN04466.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1765
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 291 TIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
T++ AE I L + + I TD+++ L+ L+N +S+G ++ I AL
Sbjct: 1488 TVYAAELLGIHMGLNLILASDRRRAAIFTDNQAALKALQNPRRSSGQ--SILRRIIDALD 1545
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
++ + V F W+ H GI GNE D LAKE
Sbjct: 1546 RVRAQGLQVEFYWIPAHQGIEGNELADNLAKE 1577
>gi|427791585|gb|JAA61244.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1099
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSH-LILDIFKALSHLQEWNISVRFIWVRGHAGIA 371
+II+D KS +++L S G P++ +L + ++ F W+ H G++
Sbjct: 890 QRAVIISDCKSAMQQL-----SRGTPTNNFCRQSLASLKDATKKGXNITFQWIPSHVGVS 944
Query: 372 GNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLF 431
GNE D LA E AL+ P +RA T+ Q ++ + S +++L+
Sbjct: 945 GNERADALANE------ALSRQPT----IRAPTNQQLP---KQTIQSH-------FRSLW 984
Query: 432 TITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHII 491
+ +P + + R R+R+ A A+L K+ AP+ LC EC E D+ H I
Sbjct: 985 N-SPHQPCVTRGLS-RAESTLLYRIRTRSAYTPAWLFKVKGAPSPLCTECNETADIEHYI 1042
Query: 492 LCCPKY 497
C ++
Sbjct: 1043 SSCKRF 1048
>gi|427780027|gb|JAA55465.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 859
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSH-LILDIFKALSHLQEWNISVRFIWVRGHAGIA 371
+II+D KS +++L S G P++ +L + ++ F W+ H G++
Sbjct: 647 QRAVIISDCKSAMQQL-----SRGTPTNNFCRQSLASLKDATKKGXNITFQWIPSHVGVS 701
Query: 372 GNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLF 431
GNE D LA E AL+ P +RA T+ Q ++ + S +++L+
Sbjct: 702 GNERADALANE------ALSRQP----TIRAPTNQQLP---KQTIQSH-------FRSLW 741
Query: 432 TITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHII 491
+ +P + + R R+R+ A A+L K+ AP+ LC EC E D+ H I
Sbjct: 742 N-SPHQPCVTRGLS-RAESTLLYRIRTRSAYTPAWLFKVKGAPSPLCTECNETADIEHYI 799
Query: 492 LCCPKY 497
C ++
Sbjct: 800 SSCKRF 805
>gi|212528742|ref|XP_002144528.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210073926|gb|EEA28013.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 431
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 292 IFTAEAFAILQALKY-VSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++L++T G L L A S
Sbjct: 141 VFDAELVGVASALEWALERHLPGPIHVLLDAQNAIKRLQSTEPGAGQ--SLALRAHMAAS 198
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L+ V WV GH G+ GNE D+ AK A + + V RA T+ +
Sbjct: 199 RLRLSGRPVTIQWVPGHNGVEGNEQADQAAKPAASKPAGPGFEGLSLAYVRRACTEARRA 258
Query: 410 I--QW-RENVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
W REN + + +G YK L I K P ++ + +L++ HA
Sbjct: 259 AVENWARENTVQGAHRRGRAYKMPRGWGLDRIAAKAP--------KRVASRYYQLKTGHA 310
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YLH+I + C+ C E RE ++HI C
Sbjct: 311 PIGTYLHRIKARDSPECRACEELRETVSHIPFEC 344
>gi|321451947|gb|EFX63450.1| hypothetical protein DAPPUDRAFT_335441 [Daphnia pulex]
Length = 316
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 113/272 (41%), Gaps = 32/272 (11%)
Query: 239 TAEAFAILQALKYASSIKEKEAGYCKVSIRESLW--IFDTQNKNSGTFKLKNFATIFTAE 296
T F L + A+SI+ G K S +E+ IF + L ++IFTAE
Sbjct: 7 TTSPFNTLDSSAPATSIRAYTDG-SKSSSQETTTCAIFIPALNKEHVWTLTKGSSIFTAE 65
Query: 297 AFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AI QALK + + E II +DS S + + + S S I + ++ L+
Sbjct: 66 VTAIYQALKLFYDMDDCPPEAIIYSDSSSAITAISSNSLSEN---EAITATREIIASLKS 122
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD------ALNPYPIPVQDVRAVTDMQH 408
R W+ H GI GNE DRLA D +L+P + V +RA
Sbjct: 123 SGTRTRLTWIPSHTGIEGNERADRLAATECNTQDGEEVHNSLSPKEM-VSIIRA------ 175
Query: 409 EIQWRENVMSQNNNKGLFYKNLFTITDKK---PWFAKAIPLRKFIVTFNRLRSNHAICQA 465
W N++ N+ K+ + ++ W P R+ + +RLRS H A
Sbjct: 176 --NWATNLL---RNQKTCKKSCIQMRSRQGTIKWHQH--PNRQVAICLHRLRSGHNRLNA 228
Query: 466 YLHKINIAPTNLCQ-ECLEREDMAHIILCCPK 496
+ H+I+ C+ C E+ HI+ C +
Sbjct: 229 FSHRIDPEADPSCRVGCAAIENARHILESCSR 260
>gi|358376556|dbj|GAA93101.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 922
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 13/129 (10%)
Query: 291 TIFTAEAFAILQALKYVSSIK----------ENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
+++ AE AI A+ V + E+ I++DS S L+ ++N S +G
Sbjct: 668 SVYAAELMAIFYAISLVLQVTQKRQSQSDKVEHPATILSDSMSALQAIRNPSNRSGQ--R 725
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
I I +A S ++ I +R WV GH GN+ DRLAKE A G ++P+ +
Sbjct: 726 TIRAILQAASEMKARGIPIRLQWVPGHCNDPGNDEADRLAKE-AVGPSKMHPFQPLLSRE 784
Query: 401 RAVTDMQHE 409
RA + + E
Sbjct: 785 RASSGREPE 793
>gi|154272339|ref|XP_001537022.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409009|gb|EDN04465.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 510
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 291 TIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
T++ AE I L + + I TD+++ L+ L+N +S+G ++ I AL
Sbjct: 233 TVYAAELLGIHMGLNLILASDRRRAAIFTDNQAALKALQNPRRSSGQ--SILRRIIDALD 290
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
++ + V F W+ H GI GNE D LAKE
Sbjct: 291 RVRAQGLQVEFYWIPAHQGIEGNELADNLAKE 322
>gi|242786247|ref|XP_002480768.1| hypothetical protein TSTA_035600 [Talaromyces stipitatus ATCC
10500]
gi|218720915|gb|EED20334.1| hypothetical protein TSTA_035600 [Talaromyces stipitatus ATCC
10500]
Length = 278
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNE 374
V ++ +++ +++L++T G L+L +A L V WV GH+GI GNE
Sbjct: 13 VGMLLGAQNAIDRLRSTRPGPGQA--LVLRAHRAAEKLALRGQPVTIQWVPGHSGIEGNE 70
Query: 375 AVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHEI--QWRE-NVMSQNNNKGLFYK-- 428
D+ AK A A + + V RA T+ + +W + N + + G YK
Sbjct: 71 QADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRAAVSEWAQINAVQGRHRDGRVYKMP 130
Query: 429 ---NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLE-R 484
NL + K P ++ + +L++ HA YL++I + CQ C E
Sbjct: 131 RGWNLDPVAGKAP--------KRVASRYYQLKTGHAPIGTYLYRIGQRESPECQACKEPH 182
Query: 485 EDMAHIILCC 494
E + H++ C
Sbjct: 183 ETVRHVLFEC 192
>gi|307171745|gb|EFN63458.1| hypothetical protein EAG_12796 [Camponotus floridanus]
Length = 120
Score = 58.9 bits (141), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 52/103 (50%)
Query: 396 PVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNR 455
P D A+ ++ + ++ + +++ KG Y NL+ ++PWF R I T +R
Sbjct: 1 PHTDFYAIAKEKYFSETKKYLSARSEIKGTQYFNLYPTFARRPWFDGFDLDRAEIATISR 60
Query: 456 LRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
+RSNH LH+ + P C L R+D+ HI+ CP Y+
Sbjct: 61 IRSNHYNLNYSLHRCGLVPHPRCHCGLSRQDINHILWSCPLYE 103
>gi|156037406|ref|XP_001586430.1| hypothetical protein SS1G_12414 [Sclerotinia sclerotiorum 1980]
gi|154697825|gb|EDN97563.1| hypothetical protein SS1G_12414 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 922
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 32/252 (12%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIII 318
G V+I+ + I + N GT +L ++ E F + +A++Y SSI + I
Sbjct: 605 GVGIVAIQSNNRILYQERSNIGTNQL-----VYNGELFGVTRAIEYASSIAYTGQKFKIY 659
Query: 319 TDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDR 378
+D+++ L +LK S G + + KA ++ + WV GH + GNE D+
Sbjct: 660 SDNQAGLYRLKTPSDHPGQANQI--RAIKAAEVIRAKGAEISLNWVPGHTSVEGNELADK 717
Query: 379 LAKE--TARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMS---QNNNKGLFYKNLFTI 433
LAKE T + T + + V+ QW + + ++N Y LF
Sbjct: 718 LAKEATTIQPTSNETSFGLLGMTVKEYASD----QWLDTLKQYELRSNQSPSTYSKLF-- 771
Query: 434 TDKKPW-FAKAIPL-----RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDM 487
PW I L R F +L+ H ++YLH+ + N C C E
Sbjct: 772 ----PWKIGSKIKLPSGTTRNTASAFFQLKLGHGYIKSYLHRFKLT-NNKCI-CSNIEAP 825
Query: 488 AHIILCCPKYQV 499
H+++ CP Y+
Sbjct: 826 QHLLISCPIYKT 837
>gi|11323019|emb|CAC16871.1| pol [Drosophila melanogaster]
Length = 1227
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 18/232 (7%)
Query: 264 KVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKS 323
KV+ + + D+ K +L ++ +IFTAEAFAIL+A ++ S + +I TDS S
Sbjct: 971 KVTGATTFAVVDSNRKIIAGGRLPSYNSIFTAEAFAILKACQFASK-NAGKSVICTDSLS 1029
Query: 324 CLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKET 383
L ++N + N + + I SH ++ + +WV H GI GNE D+ A+E
Sbjct: 1030 SLSAIRNWNH-NDPTTQEVRHILS--SHPKK----ITLLWVPSHQGIHGNELADKAAQE- 1081
Query: 384 ARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
R T ++ P +D+++ + ++ +E +S+ LF +I F
Sbjct: 1082 MRLTPSILFTPFNSKDLKS----RIKLYLKEKKLSE---WALFMHRYQSINPNCIMFKPP 1134
Query: 444 IPLRKF-IVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
+ K TF RLR H + H + + CQ C + + HI+ C
Sbjct: 1135 TNVHKRECATFIRLRIGHT-QSTHQHLLMRSARPTCQLCGDELTVDHILNAC 1185
>gi|156052453|ref|XP_001592153.1| hypothetical protein SS1G_06392 [Sclerotinia sclerotiorum 1980]
gi|154704172|gb|EDO03911.1| hypothetical protein SS1G_06392 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 852
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 36/254 (14%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIII 318
G V+I+ + I + N GT +L ++ E F + +A++Y SSI + I
Sbjct: 534 GVGIVAIQSNNRILYQERSNIGTNQL-----VYNGELFGVTRAIEYASSIAYTGQKFKIY 588
Query: 319 TDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDR 378
+D+++ L +LK S G + + KA ++ + WV GH + GNE D+
Sbjct: 589 SDNQAGLYRLKTPSDHPGQANQI--RAIKAAEVIRAKGAEISLNWVPGHTSVEGNELADK 646
Query: 379 LAKETARGTDALNPYPIPVQDVRAVTDMQ----HEIQWRENVMS---QNNNKGLFYKNLF 431
LAKE A PI + + M QW + + ++N Y LF
Sbjct: 647 LAKE------ATTIQPISNETSFGLLGMTVKEYASDQWLDTLKQYELRSNQSPSTYSKLF 700
Query: 432 TITDKKPW-FAKAIPL-----RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLERE 485
PW I L R F +L+ H ++YLH+ + N C C E
Sbjct: 701 ------PWKIGSKIKLPSGTTRNTASAFFQLKLGHGYIKSYLHRFKLT-NNKCI-CSNIE 752
Query: 486 DMAHIILCCPKYQV 499
H+++ CP Y+
Sbjct: 753 APQHLLISCPIYKT 766
>gi|156050867|ref|XP_001591395.1| hypothetical protein SS1G_08021 [Sclerotinia sclerotiorum 1980]
gi|154692421|gb|EDN92159.1| hypothetical protein SS1G_08021 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 487
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G ++ K
Sbjct: 215 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQ--SCLIKAIKVA 272
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 273 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYAFIGMDIK---RMK 329
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + +P R I +L+ H
Sbjct: 330 SE-NWIA-ILNTNN----FHQPSSTYSRNYPWKISSKIRVPGNIKRSTICAQFQLKIGHG 383
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y+
Sbjct: 384 YFKSYLKRFGISSNDSCR-CGGKESPDHLLLNCPIYKT 420
>gi|154284844|ref|XP_001543217.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406858|gb|EDN02399.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1758
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 291 TIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
T++ AE I L + + I TD+++ L+ L+N +S+G ++ I L
Sbjct: 1482 TVYAAELLGIHMGLNLILASGRRRAAIFTDNQAALKALQNPRRSSGQ--SILRRIMDTLE 1539
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
+ + V F W+ H GI GNE D+LAKE
Sbjct: 1540 RVNSQGLQVEFYWIPAHQGIEGNELADKLAKE 1571
>gi|358376822|dbj|GAA93326.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 815
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 16/151 (10%)
Query: 253 SSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKE 312
+S K+ + G V++ +L + ++ + G+ + + +++TAE AI A+ V + +
Sbjct: 514 ASEKQNQLGAAAVALDCNLQVLKSRQISIGSME---YWSVYTAELMAIYYAIGLVFQLAQ 570
Query: 313 N----------EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFI 362
I++DS S L+ +KN+ +G +I I + L+ I +R
Sbjct: 571 RNQRSAETNHEPATILSDSMSALQVIKNSWNKSGQ--CIIQAIHHSAGELKARGIPLRLQ 628
Query: 363 WVRGHAGIAGNEAVDRLAKETARGTDALNPY 393
WV GH G GNEA DRLAK+ A G D +P+
Sbjct: 629 WVPGHCGDPGNEAADRLAKD-AVGIDKKHPF 658
>gi|2735953|gb|AAB94030.1| reverse transcriptase [Aphonopelma sp. WDB-1998]
Length = 743
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 26/222 (11%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYV--SSIKENEVIIITDSKSCLEKLKNTSKSNGNP 338
S ++K+ T AE AI +AL+++ + +ITDS+S L+ L NP
Sbjct: 515 SRSYKMTASNTSSQAEILAIWKALQWLLADGVGIKSCAVITDSQSSLQAL-------ANP 567
Query: 339 S---HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPI 395
S L++ A L ++VRF W +GHA GN+ D A+E + ++ P+
Sbjct: 568 SCDWLLVMRAKAAYRQLLRNGVAVRFFWTKGHATCEGNKIADSAAREASASGLSIE-VPL 626
Query: 396 PVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFT-ITDKKPWFAKAIPLRKFIVTFN 454
P ++VT W + + N + +LF + K W
Sbjct: 627 PHSYFKSVTAKMAYRLWEQRWRASNGSSA---THLFIEVPTSKSW--------SNCSEMT 675
Query: 455 RLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPK 496
++ + HA YLH+ + + C C E + H + CP+
Sbjct: 676 QVLTKHAQYPEYLHRRGVINSPRC-VCGEMGSLDHYLAACPE 716
>gi|156061383|ref|XP_001596614.1| hypothetical protein SS1G_02835 [Sclerotinia sclerotiorum 1980]
gi|154700238|gb|EDN99976.1| hypothetical protein SS1G_02835 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 735
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G + K
Sbjct: 463 VYNDELLGVTKAIEYTNSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKVA 520
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR--GTDALNPYPIPVQDVRAVTDMQ 407
+Q + WV GH + GNE D LAKE + + Y D++ M+
Sbjct: 521 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATKIPSSSHETSYAFIGMDIKR---MK 577
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA---IP---LRKFIVTFNRLRSNHA 461
E W +++ NN F++ T + PW + +P R I L+ H
Sbjct: 578 SE-NWIA-ILNTNN----FHQPSSTYSRNYPWKISSKIRVPGNIKRSTICALFLLKIGHG 631
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YL + I+ + C+ C +E H++L CP Y+
Sbjct: 632 YFKSYLKRFGISSNDSCR-CGGKESPDHLLLNCPIYKT 668
>gi|353245589|emb|CCA76508.1| hypothetical protein PIIN_10501 [Piriformospora indica DSM 11827]
Length = 348
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 24/257 (9%)
Query: 291 TIFTAEAFAILQALKYVSSIKEN--EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKA 348
T+ E I + +++ N +V I D+++ ++ + + G H++ +I
Sbjct: 80 TVHEGELVGIALGIHLARTMQGNRAKVNISLDNQAAIQSITRARPNAGQ--HVVENILSE 137
Query: 349 LS-HLQEWN-ISVRFIWVRGHAGIAGNEAVDRLAKET-ARGTDALNPYPI----PVQDVR 401
+ L ++ + + F WV GH GI GNEA D AK+ G + +P P+
Sbjct: 138 IEDELSDYRRLRMEFTWVPGHEGIQGNEAADEEAKKAITEGASRPSEHPRWLREPLPSNL 197
Query: 402 AVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL-----RKFIVTFNRL 456
+ + + +E + NN F + + I + P + + L R+ +L
Sbjct: 198 SAVKQECKRLAKEGARERWNNSKRFDR-MSKIDETMP-SGRYLKLTDKLSRRDAALLIQL 255
Query: 457 RSNHAICQAYLHKINIAPTNLCQECLER--EDMAHIILCCPKYQVTLA---IALVGSGQD 511
R+ H +L++IN A + C C ER E++ H++ CPKY A +L G +D
Sbjct: 256 RTGHTGLNGHLNRINRADSPWCPHCGERNYENLMHVLYICPKYGEARAEWERSLRGRTED 315
Query: 512 ARLVNGGR-GFDPTQGF 527
+ V G G + T F
Sbjct: 316 LKEVLGTEDGIEETLKF 332
>gi|321462343|gb|EFX73367.1| hypothetical protein DAPPUDRAFT_253251 [Daphnia pulex]
Length = 159
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
+KL + ++IF+AE AI QAL Y+ + + V I +DS + + + N + HLI
Sbjct: 50 WKLPDNSSIFSAELAAIRQALDYIYNFEIAVVNIFSDSLASVMAIHN---QRVDSHHLIK 106
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
DI + +S+L FIW+ H I GNE D LA +
Sbjct: 107 DIRQTVSNLLSSGTRTNFIWIPSHVTIPGNERADELATQ 145
>gi|393247717|gb|EJD55224.1| hypothetical protein AURDEDRAFT_38965, partial [Auricularia
delicata TFB-10046 SS5]
Length = 132
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 291 TIFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
T+F E F IL AL+ V+ I+ +VII D++S + ++ S +G + I AL
Sbjct: 1 TVFEGELFGILLALRLVADIRGIVDVIICLDNQSAIIRVHEPSPKSGQI--ITTAIHAAL 58
Query: 350 SHLQEWNISVRF--IWVRGHAGIAGNEAVDRLAKETARGTDAL------NPYPIPVQDVR 401
+ L++ R +WV GH G+ GNE D AK A G D +P P +R
Sbjct: 59 ARLRKARPGFRLQLVWVPGHEGVDGNELADLHAKSAAAGEDCTCAAIDGDPLPHSAAALR 118
Query: 402 AVTDMQHEIQWR 413
A ++W+
Sbjct: 119 AERRQMSRLEWQ 130
>gi|393237209|gb|EJD44753.1| hypothetical protein AURDEDRAFT_65012, partial [Auricularia
delicata TFB-10046 SS5]
Length = 149
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 291 TIFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
T+F E F IL AL+ V+ I+ +VII D++S + ++ S +G + I AL
Sbjct: 18 TVFEGELFGILLALRLVADIRGIVDVIICLDNQSAIIRVHEPSPKSGQI--ITTAIHAAL 75
Query: 350 SHLQEWNISVRF--IWVRGHAGIAGNEAVDRLAKETARGTDAL------NPYPIPVQDVR 401
+ L++ R +WV GH G+ GNE D AK A G D +P P +R
Sbjct: 76 ARLRKARPGFRLQLVWVPGHEGVDGNELADLHAKSAAAGEDCTCAAIDGDPLPHSAAALR 135
Query: 402 AVTDMQHEIQWR 413
A ++W+
Sbjct: 136 AERRQMSRLEWQ 147
>gi|407915369|gb|EKG09000.1| hypothetical protein MPH_14030 [Macrophomina phaseolina MS6]
Length = 606
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 291 TIFTAEAFAILQALKYV---SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFK 347
T+F AE I+ AL+ ++ + ++ I TD+++ L L + +G L+ I
Sbjct: 335 TVFAAELQGIIMALELAGVETAHGKQKIAIFTDNQAALRALVTPGQQSGQC--LLSCIIT 392
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
L+ LQ+ +SV F W+ H G+ GNE DRLAK AR AL
Sbjct: 393 ELTGLQQKGVSVDFHWIPAHQGVPGNEEADRLAKVVAREGRALE 436
>gi|170051969|ref|XP_001862008.1| predicted protein [Culex quinquefasciatus]
gi|167872964|gb|EDS36347.1| predicted protein [Culex quinquefasciatus]
Length = 333
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 12/219 (5%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
KL ++F AE AI QA+++++ E +I++DS S L L N S P
Sbjct: 78 IKLPKTVSVFLAELLAIRQAVQHIAQHPGREFLILSDSLSSLSSLHNRSLQGTTPIPW-F 136
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA----KETARGTDALNPYPIPVQD 399
D+ + L++ +V +WV H + NEA D A KE T LN + D
Sbjct: 137 DVRNHIMQLEQAGKTVSLMWVPAHRNVTLNEAADAAAKLACKEGEPETYQLNSW-----D 191
Query: 400 VRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSN 459
+ + ++ QW+ N N +KG F + PWF + R+ IV ++ SN
Sbjct: 192 ISYPSRVKALHQWQNN--WDNGDKGRFCHGILPRVSTTPWFYETEFSRREIVILSKFISN 249
Query: 460 HAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
H+ +L + NI + C+ L H++L C Y+
Sbjct: 250 HSRIATHLRRNNIIDDDTCECGLGAATPNHLLLTCDLYE 288
>gi|353241646|emb|CCA73447.1| hypothetical protein PIIN_07401 [Piriformospora indica DSM 11827]
Length = 1244
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 56/250 (22%)
Query: 291 TIFTAEAFAILQALKYVSSI--KENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKA 348
T+ E I + SI K +V I D+++ ++ + + + G H++ I K
Sbjct: 960 TVHEGELVGIALGVHLAKSIPAKVAKVNISLDNQAAIQSITHLGANAGQ--HVVARIVKE 1017
Query: 349 LSHLQ------------------EWNISVRFIWVRGHAGIAGNEAVDRLAKET-ARGTDA 389
L L+ + + + F WV GH G+ GNEA D AK+ G
Sbjct: 1018 LESLRAGRNRRNATKSSKDQLSVQRALRIEFTWVPGHEGVQGNEAADEEAKKAITEGASG 1077
Query: 390 LNPY------PIPV------QDVRAVTDMQHEIQW-------RENVMSQNNNKGLFYKNL 430
L+ + P+P Q+ + + + W R + + + G + K
Sbjct: 1078 LSEHPKWLRKPLPSNLSAAKQECKRLAKEEARELWSNSKQFNRMSKIDETMPSGRYLK-- 1135
Query: 431 FTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLER--EDMA 488
+TDK P R+ +L + H +L++IN A + C C ER E++
Sbjct: 1136 --LTDKLP--------RRDAALLIQLHTGHIGLNGHLNRINRADSPWCPHCGERNFENLT 1185
Query: 489 HIILCCPKYQ 498
HI+ CPKY+
Sbjct: 1186 HILYICPKYR 1195
>gi|427784671|gb|JAA57787.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 434
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 9/251 (3%)
Query: 250 KYASSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSS 309
KYASS G + + ++ + K S F+L + T AE AI + ++Y+S+
Sbjct: 142 KYASSTHVFTDGSVLPTTSTAAFVIPSL-KTSERFRLDHRTTSTAAEIVAIREVIRYIST 200
Query: 310 IKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL-DIFKALSHLQEWNISVRFIWVRGHA 368
I DSK L+ + + + P +L+ ++ ++ + + + W+ GH
Sbjct: 201 KPPRSWTIFCDSKPALQIIYSALRR--GPYYLLAQEVAESHDVALKSGHRIGYQWIPGHC 258
Query: 369 GIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYK 428
G+ GNE D AK A A+ P D AV RE + + ++
Sbjct: 259 GLHGNEQADAEAK-MAHDNAAILTIPFSRPDTNAVL----YTLLRETTAAYWSLPSHRHR 313
Query: 429 NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMA 488
L + R +RLR A + YLH I A + C+ C E +
Sbjct: 314 RLHELDPDMQIRLPPTMKRCSTSLLHRLRIGVAFTRRYLHLIGRADSPNCEACGTPETIE 373
Query: 489 HIILCCPKYQV 499
HI+ CP+Y V
Sbjct: 374 HILCVCPRYIV 384
>gi|12597214|dbj|BAB21511.1| TRAS3 [Bombyx mori]
Length = 1682
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 26/241 (10%)
Query: 264 KVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKS 323
KV S+W DT+ K + L N+ T++ AE A+ A V K + +DS S
Sbjct: 1409 KVGAALSIWKGDTETK-TRKLALSNYCTVYQAELLALCVATTEVRKSKSKSFGVYSDSMS 1467
Query: 324 CLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKET 383
L+ + N +P L ++ + + +V W++ HAG+ GNE D LAKE
Sbjct: 1468 ALQTITNYD----SPHPLAVEARQNIKASLLQGKAVTLHWIKAHAGLKGNERADGLAKEA 1523
Query: 384 ARGTDALNPYP-IPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAK 442
A + Y P+ V+ M +W Y T + K +F
Sbjct: 1524 AENSRKRPDYDRCPISFVKRSLRMTTLEEWNRR-----------YTTGETASVTKLFFPD 1572
Query: 443 AIPLRKFIV------TFNRLRSNHAICQAYL--HKINIAPTNLCQECLEREDMAHIILCC 494
A+ + + ++ + H YL K +P+ +C + +E + H+++ C
Sbjct: 1573 ALVAYRIVRKIQPSNILTQIMTGHGGFSEYLCRFKCKESPSCICDPAV-KETVPHVLVEC 1631
Query: 495 P 495
P
Sbjct: 1632 P 1632
>gi|427791897|gb|JAA61400.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 998
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 16/214 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYV--SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
F L N T + AE A +A+ ++ S +K+ V + TD S L +L +T+ S+
Sbjct: 765 FHLHNATTAYDAEILAFAEAIHFILISPLKK-PVHLYTDCLSILMRLASTNDSDTR---- 819
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
+++I L +I + V H GI GNE D A AR + + + +R
Sbjct: 820 LINIKHQLHKCYLQHIPIHLFHVPAHTGITGNEVADT-AASCARTSGLIRSSKHTLPHIR 878
Query: 402 AVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
++QW + + N L Y + TI WF P R + L + H
Sbjct: 879 KQFQTTLKLQWHSHWQQEGPNTSL-YHWIPTIHHIPHWFP---PNR----SLTHLLTGHG 930
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
Q YL + NI T+ CQ D H CP
Sbjct: 931 HFQYYLKRFNITYTDTCQCGSPCADEQHYFNHCP 964
>gi|427778517|gb|JAA54710.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 468
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 11/217 (5%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSI-KENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
FK + T AE A+ AL++++S + ++ + +DSK L+ L + + G L
Sbjct: 206 FKTSHATTSTAAELAALRSALEFINSEERPSKWAVFSDSKPALQCLGSVLR-RGCHDQLT 264
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRA 402
+ K H+ + + F W+ GH GI+GN++ D A+ + + N PIP+
Sbjct: 265 YETVKLHHHVIQKGHDIDFQWLPGHCGISGNDSADNAARASHQEA---NIVPIPLSR--- 318
Query: 403 VTDMQHEIQ--WRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNH 460
TD +I+ R +++ N + + L + A + R+ RL
Sbjct: 319 -TDAARQIRELARSLTLTEWNAPNIRHTRLHQLNPSLQLRAPSGLHRREASVLYRLWLGV 377
Query: 461 AICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
A +AY I + + C C E + H++ CP++
Sbjct: 378 AFTKAYTTLIGVTDSAACDVCGTDETIEHLLCHCPRF 414
>gi|156039948|ref|XP_001587081.1| hypothetical protein SS1G_12110 [Sclerotinia sclerotiorum 1980]
gi|154696167|gb|EDN95905.1| hypothetical protein SS1G_12110 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1500
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 20/246 (8%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIII 318
G V+I+ + I + N GT +L ++ E F + +A++Y SSI + I
Sbjct: 1182 GVGIVAIQSNNRILYQERSNIGTNQL-----VYNGELFGVTRAIEYASSIAYTGQKFKIY 1236
Query: 319 TDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDR 378
+D+++ L +LK S G + + KA ++ + WV GH + GNE D+
Sbjct: 1237 SDNQAGLYRLKTPSDHPGQANQI--RAIKAAEVIRAKGAEISLNWVPGHTSVEGNELADK 1294
Query: 379 LAKE--TARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMS---QNNNKGLFYKNLFTI 433
LAKE T + T + + V+ QW + + ++N Y LF+
Sbjct: 1295 LAKEATTIQPTSNETSFGLLGMTVKEYASD----QWLDTLKQYELRSNQSPSTYSKLFSW 1350
Query: 434 TDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
+ R F +L+ H ++YLH+ + N C C E H+++
Sbjct: 1351 KIGSKIKLPSGTTRNTASAFFQLKLGHGYIKSYLHRFKLT-NNKCI-CSNIEAPQHLLIS 1408
Query: 494 CPKYQV 499
CP Y+
Sbjct: 1409 CPIYKT 1414
>gi|358376686|dbj|GAA93218.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 640
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 101/247 (40%), Gaps = 25/247 (10%)
Query: 253 SSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKE 312
+S KE + G V++ + I ++ + G+ + + +++ AE I A+ V + +
Sbjct: 345 ASGKENQLGAAAVALDHNQQIMGSRQISIGSME---YWSVYAAELMTIYYAIGLVFQLAQ 401
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAG 372
T+ + P+ ++ D + L+ I +R WV GH G G
Sbjct: 402 KHA---------------TTTATQGPATILSDT----AELKARGIPLRLQWVPGHCGDPG 442
Query: 373 NEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFT 432
NE DRLAKET G + +P+ + +A + + +W + + N L +
Sbjct: 443 NETADRLAKETV-GAENKHPFQHLLSREKAFIRNKIKKEWEQEWKTSKNGGHLRRVDQAL 501
Query: 433 ITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIIL 492
+ ++P R +LR+ H+ Y + C EC E + H+++
Sbjct: 502 PASRTRRLYGSLP-RNRAYLLAQLRTGHSWLATYAKQHGFRDNEQC-ECGATETVVHVLI 559
Query: 493 CCPKYQV 499
CP+ +
Sbjct: 560 DCPRLRA 566
>gi|427781951|gb|JAA56427.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 20/226 (8%)
Query: 280 NSGTFKLKNFATIFT--AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
+S T +LK F + T AE A+ AL++V N I DSK+ L+ L + + +G+
Sbjct: 188 SSVTIQLKMFYSTSTTAAELVALRAALQFVIEQTPNSWAIFCDSKAALQSLPSALR-HGS 246
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPV 397
L+ +I + + E +V F W+ H GI GN+ D A+ G ++ IP+
Sbjct: 247 HEQLVAEIRQVHHDIIEKGHTVIFQWMPSHCGIQGNDQADAAARSAHNGVSSVA---IPL 303
Query: 398 QDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFT---ITDKKPWFAKAIP---LRKFIV 451
A +++ V+++ L++ +T + P IP R+
Sbjct: 304 SRSDAAKELR--------VLARRLTLDLWHSPTYTSARLHTLDPDLKLRIPSGLSRRHST 355
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
RL A AY I ++ + LC+ C E +AH++ C ++
Sbjct: 356 LLARLWLGVAFSNAYSFLIGMSDSPLCEVCGCSETVAHLLCDCTRF 401
>gi|242821354|ref|XP_002487663.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712584|gb|EED12009.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 282
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 291 TIFTAEAFAILQALKYVSSI----------KENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
+++ A+ AI A+ V I ++ I++DS S L+ L N G
Sbjct: 155 SVYAAKLMAIYYAISLVLKIAMETRQAMTDRQEPATILSDSMSVLQALSNARNKLGQ--R 212
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPY 393
+I + +++ LQ I +R WV GH G GNEA DRLAKE A G + +P+
Sbjct: 213 IIQAVQQSVQELQTQGIPLRLQWVPGHCGDLGNEAADRLAKE-AMGPEKEHPF 264
>gi|242765583|ref|XP_002341004.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218724200|gb|EED23617.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 361
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 31/202 (15%)
Query: 293 FTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSH 351
F AE + AL++ + + ++ D+++ +++LK+ G L+L +A+
Sbjct: 101 FDAELMGVATALEWALERQPLGPIWVLLDAQNAIDRLKSARPGPGQ--ALVLRAHRAVEK 158
Query: 352 LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQ 411
L V WV GH+G+ GNE D+ AK A A + + D R V M
Sbjct: 159 LAMRGQPVTIQWVPGHSGVVGNEQADQAAKRAASKQTAPGFEHLSLADGR-VYKMPR--G 215
Query: 412 WRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKIN 471
W NL + K P ++ + +L++ HA YLH+I
Sbjct: 216 W----------------NLDPVAGKAP--------KRLASRYYQLKTGHAPIGTYLHRIG 251
Query: 472 IAPTNLCQECLE-REDMAHIIL 492
+ CQ C E E + H++
Sbjct: 252 QRESPECQACKEPHETVRHVLF 273
>gi|294891955|ref|XP_002773822.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239879026|gb|EER05638.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 1575
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVK 105
N+I+ EQ GC G GC L++D ++ + Y NL+ W+D KAYD+ H W+
Sbjct: 598 NDIIAKEQLGCRAGRRGCVHQLLIDHAVSHHVRTSYHNLACGWVDFAKAYDSLAHSWIKI 657
Query: 106 VIQMYKIDLKSATFCVFCV 124
++ + + F C+
Sbjct: 658 WLKEFGVGENIINFISRCM 676
>gi|1549144|dbj|BAA07467.1| ORF2 [Bombyx mori]
Length = 1162
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 26/237 (10%)
Query: 270 SLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK 329
S+W + + + S L + T++ AE A+ A+K + + +DSK+ L +
Sbjct: 904 SIWDGEVEIR-SLKLALAPYCTVYQAELLALSYAVKEAQLRNGSTFGVFSDSKAALLTVI 962
Query: 330 NTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDA 389
N +G+ L +DI K L N +V W++ HAG+ GNE D+LAKE A +
Sbjct: 963 N----HGSLHPLAVDIRKMLKQCALQNKTVALYWIKAHAGLEGNERADQLAKEAALLSKK 1018
Query: 390 LNPYPI-PVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP--- 445
Y + PV V+ + R + + N + Y++ + K +F A+
Sbjct: 1019 SPNYDLCPVSYVKRII--------RSGSLDEWNRR---YRDSDRASVTKMFFPDAVAAYS 1067
Query: 446 -LRKFIVT--FNRLRSNHAICQAYLHKINIA--PTNLCQECLEREDMAHIILCCPKY 497
+RK +T + + H YL + P+ C+ + E + H++ CP +
Sbjct: 1068 TVRKMRITGHITQFTTGHGGFSEYLARFKCKGDPSCACEPGMP-ETVEHLLTSCPIF 1123
>gi|156051540|ref|XP_001591731.1| hypothetical protein SS1G_07177 [Sclerotinia sclerotiorum 1980]
gi|154704955|gb|EDO04694.1| hypothetical protein SS1G_07177 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 975
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 292 IFTAEAFAILQALKYVSSI--KENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E F + +A++Y SSI + I +D+++ L +LK S G + + KA
Sbjct: 683 VYNGELFGVTRAIEYASSIAYTGQKFKIYSDNQAGLYRLKTPSDHPGQANQI--RAIKAA 740
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE--TARGTDALNPYPIPVQDVRAVTDMQ 407
++ + WV GH + GNE D+LAKE T + T + + V+
Sbjct: 741 EVIRAKGAEISLNWVPGHTSVEGNELADKLAKEATTIQPTSNETSFGLLGMTVKEYASD- 799
Query: 408 HEIQWRENVMS---QNNNKGLFYKNLFTITDKKPW-FAKAIPL-----RKFIVTFNRLRS 458
QW + + ++N Y LF PW I L R F +L+
Sbjct: 800 ---QWLDTLKQYELRSNQSPSTYSKLF------PWKIGSKIKLPSGTTRNTASAFFQLKL 850
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
H ++YLH+ + N C C E H+++ CP Y+
Sbjct: 851 GHGYIKSYLHRFKLT-NNKCI-CSNIEAPQHLLISCPIYKT 889
>gi|331245769|ref|XP_003335520.1| hypothetical protein PGTG_16963 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1463
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 34/207 (16%)
Query: 295 AEAFAILQALKYV----SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD-IFKAL 349
+EA +L AL+ S++ + ++I D++ + + KN + P I + I ++
Sbjct: 1198 SEAAGVLAALELANHLCSTLDRSNIMIFMDNQGVISRTKNPR--SPKPGQWIFEKIDSSI 1255
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHE 409
S L E + + F+W GH I GNE D+LA+E A P+P + +QH+
Sbjct: 1256 SLLPE-GLGISFVWCPGHVNIPGNEMADQLAREALESPSA---PPLPTKG--NYLKIQHQ 1309
Query: 410 IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHK 469
+ + K+P +P+ N+L S H +++L +
Sbjct: 1310 VT-------------------AALLPKRP-SPSTLPI-SCSSLINQLASGHCALKSFLFR 1348
Query: 470 INIAPTNLCQECLEREDMAHIILCCPK 496
I LC C RE + H++ CP+
Sbjct: 1349 IRRHFDPLCSFCGSRETVRHLMNFCPQ 1375
>gi|407915859|gb|EKG09366.1| Reverse transcriptase, partial [Macrophomina phaseolina MS6]
Length = 1113
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 277 QNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIK---ENEVIIITDSKSCLEKLKNTSK 333
+ K GT K T+F AE ++ AL+ + + ++ + TD+++ L L +
Sbjct: 979 RTKYMGTIKA---TTVFAAELQGLVMALELAEAEMVHGKRKIAVFTDNQAALRALVTPGE 1035
Query: 334 SNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
+G +L+ I L+ LQ+ SV F W+ H G+ GNE D+LAK AR A+
Sbjct: 1036 QSGQ--YLLSSIIAKLTGLQQKGASVGFHWIPAHQGVPGNEEADKLAKAAAREGRAVE 1091
>gi|427781953|gb|JAA56428.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 20/226 (8%)
Query: 280 NSGTFKLKNFATIFT--AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
+S T +LK F + T AE A+ AL++V N I DSK+ L+ L + + +G+
Sbjct: 188 SSVTIQLKMFYSTSTTAAELVALRAALQFVIEQTPNSWAIFCDSKAALQSLPSALR-HGS 246
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPV 397
L+ +I + + E V F W+ H GI GN+ D A+ D ++ IP+
Sbjct: 247 HEQLVAEIRQVHHDIIEKGHQVIFQWMPSHCGIQGNDQADAAARS---AHDGVSSVAIPL 303
Query: 398 QDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFT---ITDKKPWFAKAIP---LRKFIV 451
A +++ V+++ L++ +T + P IP R+
Sbjct: 304 SRSDAAKELR--------VLARRLTLDLWHSPTYTSARLHTLDPDLKLRIPSGLSRRHST 355
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
RL A AY I ++ + LC+ C E +AH++ C ++
Sbjct: 356 LLARLWLGVAFSNAYSFLIGMSDSPLCEVCGCSETVAHLLCDCTRF 401
>gi|242768198|ref|XP_002341520.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218724716|gb|EED24133.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 200
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 26/197 (13%)
Query: 314 EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGN 373
E II DS++ ++ + T K+ ++ I + L+ + V W+ H GI GN
Sbjct: 13 EAIIFCDSQAAIQAIDGTQKTG---QQILGSIAEKWDELRNQGVQVSIHWIPTHQGIEGN 69
Query: 374 EAVDRLAKETA-----RGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYK 428
E DR AKE R P +D++ + Q E +W Q N +G +
Sbjct: 70 ERADRAAKEATGWRLIRNIGLQQPLSALKRDLKTLAYKQWEQEW------QRNQQG---R 120
Query: 429 NLFTITDKKPWFAKAIPL-----RKFIVTFNRLRSNHAICQAYLHKINIAPTN--LCQEC 481
LF I DK K I L R ++ + + + +L++ I + CQ
Sbjct: 121 TLFRIVDKPS--KKNIELHARLSRPLSSILTQMWTGNIGLRHFLYQRKIPGIDDGECQCR 178
Query: 482 LEREDMAHIILCCPKYQ 498
+ + HI+L CPK Q
Sbjct: 179 RGAQTVTHILLSCPKVQ 195
>gi|294880719|ref|XP_002769117.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239872268|gb|EER01835.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 390
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 19/247 (7%)
Query: 252 ASSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYV--SS 309
S +K+++ G V R+ + + +S +KL +ATI E +L+A+++V ++
Sbjct: 112 GSRVKDRKTGAGMVVYRKGVEV------HSNYWKLSPYATITDCELLGVLEAVRWVILTT 165
Query: 310 IKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAG 369
E E + TDS++ L+ L + S + + L E V F WV GH+G
Sbjct: 166 EGEEEWAVFTDSQAVLKILSSRSTVARRDKARQITLL-----LAEIPDKVTFHWVPGHSG 220
Query: 370 IAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKN 429
+ N D LA + A + I V+ +R + R+ + G +
Sbjct: 221 MFANGRADELAAKGASMMEVSAETEISVKTLRRYQAEAGRLALRKWWSDKRAGLGTCVND 280
Query: 430 LF-TITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMA 488
F + + W + L V F R A A+LH+ + + C D+
Sbjct: 281 FFYCASHARLWSRGEVTLAGSAVVFGR-----APTPAHLHRCGVIASPECDCGAPIGDVR 335
Query: 489 HIILCCP 495
H++ CP
Sbjct: 336 HLLRSCP 342
>gi|427780715|gb|JAA55809.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 481
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 14/219 (6%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
FK + + AE AI AL++V I +DSK+ L+ + + + N L+
Sbjct: 220 FKTSHLTSSTAAELTAIRAALEFVVKEPPQAWSIFSDSKAALQCIMSPFRRGPN-EQLVA 278
Query: 344 DIFKALSHLQ-EWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRA 402
DI + L H E ++ + W+ GH GI GN+ D A+ DAL+ IP+ A
Sbjct: 279 DI-RILHHRAVEKQHNIVYQWIPGHCGIYGNDRADEAARS---AHDALHCAAIPLSRTDA 334
Query: 403 VTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP---LRKFIVTFNRLRSN 459
T ++ RE ++Q ++ L + P +P R RL
Sbjct: 335 ATRLRSLA--RELTLAQWHSTEFTNARLHNL---DPNLQLRLPSGITRAEETLLCRLWLG 389
Query: 460 HAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
A AY +I +A + C C E +AH++ CP+++
Sbjct: 390 VAFTNAYSFRIGMASSPTCDNCSCEETIAHLLCECPRFK 428
>gi|212541462|ref|XP_002150886.1| hypothetical protein PMAA_060570 [Talaromyces marneffei ATCC 18224]
gi|210068185|gb|EEA22277.1| hypothetical protein PMAA_060570 [Talaromyces marneffei ATCC 18224]
Length = 423
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 41/281 (14%)
Query: 221 TQNKNSGTFK-LQNFATIF--TAEAFAILQALKYASSIKEKE--AGYCKVSIRESLWIFD 275
T++ + G + +QN F T QAL A+ + AG ++ E+LW
Sbjct: 94 TKDPSGGIERTVQNAPAAFPGTTRVLGTEQALIEAAEQDDGRTGAGVALQTVPEALW--- 150
Query: 276 TQNKNSGTFKLKNFATIFTAEAFAILQALKY-VSSIKENEVIIITDSKSCLEKLKNTSKS 334
++ F +F AE + AL++ + + ++ D+++ +++L++T
Sbjct: 151 ---EHLELLIYTGF-EVFDAELVGVASALEWALERHLPGPIHVLLDAQNAIKRLQSTEPG 206
Query: 335 NGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYP 394
G L L S L+ V WV GH + GNE D+ AK TA
Sbjct: 207 AGQ--SLALRPHMTASRLRLSGRPVTIQWVPGHNRVEGNEQADQAAKPTA---------- 254
Query: 395 IPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFN 454
A + ++WR ++ +G L I K P K + R +
Sbjct: 255 ----SKPAGPGFEGLLRWRIGLVRTLMPRGW---GLDRIAAKAP---KRVASRSY----- 299
Query: 455 RLRSNHAICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
+L++ HA YLH+I + C C E RE ++HII C
Sbjct: 300 QLKTGHAPIGTYLHRIKARDSPECGACGELRETISHIIFEC 340
>gi|331249470|ref|XP_003337352.1| hypothetical protein PGTG_19051 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 890
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 34/221 (15%)
Query: 290 ATIFTAEAFAILQALKYVSSIKE-------NEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
A+ + AE AI L +S+ E N V I +D+++ L+ + N S N S I
Sbjct: 660 ASAYEAEVQAINIGLDIISNEAEKNNLPPFNNVNIFSDNQATLQVIANPPLSKSNQSTFI 719
Query: 343 LDIFKALSHL-QEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
IF L+ L +++ S+ +W H GI NE VD+LAKE G + Q R
Sbjct: 720 -QIFDKLNILITDFHFSISLLWCPAHVGIPENEKVDQLAKEATEGNTLFDLE----QQSR 774
Query: 402 AVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKF----------IV 451
++++Q I + + + + K +N ++++ IP++ F
Sbjct: 775 TLSNIQQIINSKFSFVKK---KDPIIRNHISLSN--------IPIKIFNSLNRLERGLSS 823
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIIL 492
T +LRS H+ +L I+ + C C E + H ++
Sbjct: 824 TIYQLRSGHSPLNDFLFHIDKIDSPDCSHCRSPETVKHFLI 864
>gi|294947382|ref|XP_002785360.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239899133|gb|EER17156.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 1627
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 43/242 (17%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKEN--EVIIITDSKSCLEKLKNTSKSNGNPSHL 341
FKL+ FATI E AI +AL+++S E ++ TDS++ + ++ + +
Sbjct: 1378 FKLERFATIHQCELEAIRRALRWLSHSAHRGIEWLLFTDSQASIRTIRGREATERS---- 1433
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYP------I 395
I + ++HL ++ V+ W GH G+ NEAVD+LA G L P +
Sbjct: 1434 --AIARDIAHLG-LHVQVQLNWCPGHEGVQWNEAVDQLANT---GRKQLFPLDRGAAMMV 1487
Query: 396 PVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPW-FAKAIPLRKFIVTFN 454
P V+ + Q E R + + G ++ W F+ A R+F
Sbjct: 1488 PPSYVKHMLKTQMEKDTRSWWLDKRATLGTSVRDFL-------WGFSHA---RRF----- 1532
Query: 455 RLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVTLAIALVGSGQDARL 514
L++ HA + H + + C D+ HI+ CP L G+ +D+RL
Sbjct: 1533 -LKAGHAPTPHHRHTMGLRTDPSCPCGHADGDVKHILRDCP--------LLDGARRDSRL 1583
Query: 515 VN 516
+
Sbjct: 1584 LQ 1585
>gi|212541456|ref|XP_002150883.1| hypothetical protein PMAA_060540 [Talaromyces marneffei ATCC 18224]
gi|210068182|gb|EEA22274.1| hypothetical protein PMAA_060540 [Talaromyces marneffei ATCC 18224]
Length = 370
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 33/223 (14%)
Query: 274 FDTQNKNSGTFKLKNFATIFTAEAFAILQALKY-VSSIKENEVIIITDSKSCLEKLKNTS 332
FD + F + +F AE + AL++ + + ++ D+++ +++L++T
Sbjct: 96 FDPSKTEAAFFTRQ----LFDAELVGVASALEWALERHLPGPIHVLLDAQNAIKRLQSTE 151
Query: 333 KSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP 392
G L L S L+ V WV GH + GNE D+ AK TA
Sbjct: 152 PGAGQ--SLALRPHMTASRLRLSGRPVTIQWVPGHNRVEGNEQADQAAKPTASKP----- 204
Query: 393 YPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVT 452
A + ++WR ++ +G L I K P K + R +
Sbjct: 205 ---------AGPGFEGLLRWRIGLVRTLMPRGW---GLDRIAAKAP---KRVASRSY--- 246
Query: 453 FNRLRSNHAICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
+L++ HA YLH+I + C C E RE ++HII C
Sbjct: 247 --QLKTGHAPIGTYLHRIKARDSPECGACGELRETISHIIFEC 287
>gi|212530056|ref|XP_002145185.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210074583|gb|EEA28670.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 425
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 29/213 (13%)
Query: 292 IFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSH 351
+F AE + AL++ + + +L++T G L L A S
Sbjct: 27 VFDAELVGVASALEWA---------LGRHLPGPIYRLQSTEPGAGQ--SLALRAHMAASR 75
Query: 352 LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHEI 410
L+ V WV GH GI GNE D+ AK A + + V RA T+ +
Sbjct: 76 LRLSGRPVTIQWVPGHNGIEGNEQADQAAKRAASKPARPGFEGLSLAYVRRACTEARRAA 135
Query: 411 --QW-RENVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAI 462
W REN + +G YK L I K P ++ + +L++ HA
Sbjct: 136 VENWARENAVQGAYRRGRAYKMPRGWGLDRIAAKAP--------KRVASRYYQLKTGHAP 187
Query: 463 CQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YLH+I + C+ C E RE ++HI+ C
Sbjct: 188 IGTYLHRIKARDSPECRACGELRETVSHILFEC 220
>gi|427792791|gb|JAA61847.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 650
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 7/215 (3%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
FK+ + + AE + QA ++S + DSK L+ + N K S L+
Sbjct: 388 FKITHRTSSTAAELTGVRQAAHFISQQSPATWTLFCDSKPALQLIGNYMKQGTAYSPLVY 447
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAV 403
+I L+ + ++ W+ H GIAGNE D AK A T + D+ A+
Sbjct: 448 EIMIMLTEASQSGHTITLQWIPSHCGIAGNEQADAEAK-MAHTTGEVVSIHFSRYDINAL 506
Query: 404 TDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTF-NRLRSNHAI 462
+ I+ M++ N + + D F LR+ T +RLR A
Sbjct: 507 --LSKAIK---TSMTRLWNDPDYRQERLYRLDSGRAFRLPCRLRRDQETLLHRLRLGVAY 561
Query: 463 CQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+ YL KI C C E + HI+ CP+Y
Sbjct: 562 TRRYLCKIGQEQNPNCSVCHTSETIHHILCVCPQY 596
>gi|331236443|ref|XP_003330880.1| hypothetical protein PGTG_12417 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1101
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 93/237 (39%), Gaps = 37/237 (15%)
Query: 282 GTFKLKNFATIFTAEAFAILQALKYVSSIKE-------NEVIIITDSKSCLEKLKNT-SK 333
T N T F AE + A+ I E +V I +D++S L N S
Sbjct: 824 ATLHPANTITNFEAELIGVRLAINMAQEILEADTENSYTDVAIFSDNQSALMLSSNPISL 883
Query: 334 SNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPY 393
S G + D F L L+ ++R W GH GI NE D LAK+ A G P
Sbjct: 884 SPGQ--SIYTDNFFRLKLLRR---TIRLFWCPGHEGITANERADSLAKKAAAG----EPL 934
Query: 394 P---------IPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKN---LFTITDKKPWFA 441
P +P + + ++ E + ++ + +F KN L D +
Sbjct: 935 PAGCTTLSITVPNSLAKLRQSCKLSLKAPELLSDEDTRRFVFSKNCTKLLQALDTQE--- 991
Query: 442 KAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
+ T +LR++ A +L KI C ECL E+ AH ++ C +Y+
Sbjct: 992 -----KGLAATILQLRADTAPLNNFLFKIKTILDPRCTECLVLENAAHFLMFCARYR 1043
>gi|427782325|gb|JAA56614.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1173
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 7/215 (3%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
FK+ + + AE + QA ++S + DSK L+ + N K S L+
Sbjct: 911 FKITHRTSSTAAELTGVRQAAHFISQQSPATWTLFCDSKPALQLIGNYMKQGTAYSPLVY 970
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAV 403
+I L+ + ++ W+ H GIAGNE D AK A T + D+ A+
Sbjct: 971 EIMIMLTEASQSGHTITLQWIPSHCGIAGNEQADAEAK-MAHTTGEVVSIHFSRYDINAL 1029
Query: 404 TDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTF-NRLRSNHAI 462
+ I+ M++ N + + D F LR+ T +RLR A
Sbjct: 1030 --LSKAIK---TSMTRLWNDPDYRQERLYRLDSGRAFRLPCRLRRDQETLLHRLRLGVAY 1084
Query: 463 CQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+ YL KI C C E + HI+ CP+Y
Sbjct: 1085 TRRYLCKIGQEQNPNCSVCHTSETIHHILCVCPQY 1119
>gi|331216904|ref|XP_003321131.1| hypothetical protein PGTG_02173 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 672
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 34/221 (15%)
Query: 290 ATIFTAEAFAILQALKYVSSIKE-------NEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
A+ + AE AI L +S+ E N V I +D+++ L+ + N S N S I
Sbjct: 442 ASAYEAEVQAINIGLDIISNEAEKNNLPPFNNVNIFSDNQATLQVIANPPLSKSNQSTFI 501
Query: 343 LDIFKALSHL-QEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
IF L+ L +++ S+ +W H GI NE VD+LAKE G + Q R
Sbjct: 502 -QIFDKLNILITDFHFSISLLWCPAHVGIPENEKVDQLAKEATEGNTLFDLE----QQSR 556
Query: 402 AVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKF----------IV 451
++++Q I + + + + K +N ++++ IP++ F
Sbjct: 557 TLSNIQQIINSKFSFVKK---KDPIIRNHISLSN--------IPIKIFNSLNRLERGLSS 605
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIIL 492
T +LRS H+ +L I+ + C C E + H ++
Sbjct: 606 TIYQLRSGHSPLNDFLFHIDKIDSPDCSHCRSPETVKHFLI 646
>gi|322702355|gb|EFY94018.1| reverse transcriptase, putative [Metarhizium anisopliae ARSEF 23]
Length = 639
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 23/220 (10%)
Query: 288 NFATIFTAE------AFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
N +T + E A I Q + SI+E +V+I TD+++ + + +G S+L
Sbjct: 386 NVSTAYAGELQGISLALQIAQEDRNRGSIRE-KVLIYTDNQAAVRSVARPRGESG--SYL 442
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
+ DI + + LQ ++V W+ H GI GNEA D+ AK A G P P P
Sbjct: 443 LQDITRRMQELQAQGLTVEDRWIPAHTGIHGNEAADQAAK-NATGWRKKGP-PGPKAQRS 500
Query: 402 AVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+ + + QW++ + +++ T K K R+ + + +L++
Sbjct: 501 QRVNKRWQAQWQQETRGRAT-----FRHTSEPTPKVSQPRKHFSKRQSAI-YVQLQNEKI 554
Query: 462 ICQAYLHKINIA----PTNLCQECLEREDMAHIILCCPKY 497
+L K + P C E R+ +AHI+L C +Y
Sbjct: 555 GLNNFLFKRRVPGVTDPRCDCGES--RQTVAHILLQCRRY 592
>gi|427798201|gb|JAA64552.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1128
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 288 NFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFK 347
+ T AE A+ AL+++S + + I +DSK+ L+ L + + G L+ +I +
Sbjct: 966 HLTTSTGAELTALRAALQFISDERAQKWTIFSDSKAALQSLLSPLR-RGPHEQLVFEIAE 1024
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQ 407
HL E + F W+ H GI GNE DR A+ N IP+ A ++
Sbjct: 1025 ETHHLTEKGHELAFQWLPSHCGIIGNERADRAARSAHTEN---NEILIPLSRTDAARKLR 1081
Query: 408 HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP 445
+ R+ SQ N + L+T+ P + IP
Sbjct: 1082 --MLARQRTTSQWNEPHFKHARLYTL---DPTLSLQIP 1114
>gi|4586458|dbj|BAA76384.1| reverse transcriptase [Magnaporthe grisea]
Length = 288
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 14/210 (6%)
Query: 292 IFTAEAFAILQALKYVSSIKENEVIII-TDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AEA L+ L+ + + I I DS S + LK + + L+ +
Sbjct: 45 VFDAEAIGALKGLQAAAKAQPGARIWICVDSTSVIWGLKGDAPRSSQ--WAFLEFHDLVD 102
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP------YPIPVQDVRAVT 404
L++ VR W GH GI GN+ D LAK + G +P Y +RA+
Sbjct: 103 LLRKQGTEVRVRWCPGHQGIPGNDRADELAKAGSAGPPDPDPRAQQTTYSGAGTVLRAIL 162
Query: 405 DMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQ 464
+ WR+ + ++ + + F T +K +P R + + +R+ H +
Sbjct: 163 SNIEKDWWRKELCERSP---AYREWKFQYTPRKEPEELRLP-RPLLGHYLAMRTGHGDFK 218
Query: 465 AYLHKINIAPTNL-CQECLEREDMAHIILC 493
AY + N N C C +R H + C
Sbjct: 219 AYHDRFNHQDANTSCAWCWKRTSPEHPVHC 248
>gi|331240525|ref|XP_003332913.1| hypothetical protein PGTG_14072 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 339
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 83/211 (39%), Gaps = 38/211 (18%)
Query: 295 AEAFAILQALKYVSSIKE----NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+EA +L AL S + E ++I+ D++ L++L + L I K LS
Sbjct: 109 SEAAGVLAALGLASVLTEVTDTRRILILVDNQGVLKRLNDPLAPKPG-QKLFEQIHKGLS 167
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEI 410
L +++V F W GH I GNE D LAK DAL
Sbjct: 168 -LLPAHLNVTFAWCPGHRDIMGNEMADTLAK------DAL-------------------- 200
Query: 411 QWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIV---TFNRLRSNHAICQAYL 467
E+ +Q + G +K + P P IV + N+L S H + YL
Sbjct: 201 ---ESPSTQQLDVGSNFKKVNRQALASPLTKSPTPSNLPIVASSSINQLASGHCALKNYL 257
Query: 468 HKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
KI + LC C RE + H + CP +
Sbjct: 258 FKICRSIEPLCPNCGVRETVFHFMNFCPTIR 288
>gi|328697220|ref|XP_001949504.2| PREDICTED: hypothetical protein LOC100162931 [Acyrthosiphon pisum]
Length = 1915
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 284 FKLKNFATIFTAEAFAILQALKY-VSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
+KL + +I+TAE AIL+A+++ +S I ++ + I +DS S L L+N +PS ++
Sbjct: 980 WKLSDKCSIYTAETLAILKAIEFTISEINDSNITIFSDSLSALTSLQNLY----SPSDIV 1035
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRA 402
I ++ + ++ + WV GH I GNE D AK ++L+ D++
Sbjct: 1036 RKIQNTHYIPKQQDKNITYSWVPGHCNIDGNELADSAAKLAHSSPNSLSLPIFSFNDIKR 1095
Query: 403 V----TDMQHEIQWRE 414
V T + + +W E
Sbjct: 1096 VIEKDTLLHCQKEWNE 1111
>gi|342866015|gb|EGU71995.1| hypothetical protein FOXB_17497 [Fusarium oxysporum Fo5176]
Length = 257
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 23/225 (10%)
Query: 290 ATIFTAEAFAILQALKYVSSIKEN--EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFK 347
A +F AEA L+ LK +++E+ + I I CL+ L + G PS D+F
Sbjct: 15 AEVFDAEATGALEGLKAALNLRESASQNIFI-----CLDNLAAATCLRGTPSDSSQDVFL 69
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQ 407
L + + + WV G+ I GNE D+LAK + + P + +R + Q
Sbjct: 70 EFQALAASHGATQVRWVPGYTNIPGNEQADKLAKAASSLPEPEGAQPT-LAYLRRIARQQ 128
Query: 408 ----HEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAIC 463
+E W + Q+ NL T P ++P R + RS H
Sbjct: 129 PKEAYEAWWSTSAPEQDKR-----LNLKATTGCPPEL--SLP-RAALHHLLAARSLHGDF 180
Query: 464 QAYLHKINIAPTNLCQECLEREDMAHIILC---CPKYQVTLAIAL 505
AY + + L C R+ HI C P++++ LA +L
Sbjct: 181 AAYHERFDHVDARLVCSCGRRKAPDHIFYCRKVPPRHRMRLAPSL 225
>gi|242811714|ref|XP_002485806.1| hypothetical protein TSTA_098250 [Talaromyces stipitatus ATCC
10500]
gi|218714145|gb|EED13568.1| hypothetical protein TSTA_098250 [Talaromyces stipitatus ATCC
10500]
Length = 275
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 42/214 (19%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F A+ + AL++ + + + D+++ +++LK+T G L+L +A
Sbjct: 7 VFDAKLVGVATALEWALERQLLGPIWVFLDAQNAIDRLKSTRPGPGQA--LVLRAHRAAE 64
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEI 410
L V WV GH+G+ GNE D+ AK A +H
Sbjct: 65 KLASRGQPVTIQWVPGHSGVEGNEQADQAAKRAA---------------------SKHTA 103
Query: 411 QWRENV----MSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
E++ + + + G YK +L + K P ++ + +L++ HA
Sbjct: 104 HGFEHLFLAYIKRRHRDGCVYKMPRGWSLDPLAGKAP--------KRLASRYYQLKTGHA 155
Query: 462 ICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
YLH+I + CQ C E E + H++ C
Sbjct: 156 PIGTYLHRIGRRESLECQACKEPHETVRHVLFEC 189
>gi|51950578|gb|AAA70222.2| putative ORF2 [Drosophila melanogaster]
Length = 1219
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 286 LKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDI 345
L ++++ T+E AIL+A++ + + + II +DS S ++ ++NT+ ++ PS
Sbjct: 978 LPPYSSVLTSETIAILEAIELTKN-RRGKFIICSDSLSAVDSIQNTNNNSFYPS------ 1030
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTD 405
+ S + + ++ +W+ GH+GI GNE D+ AK + L P I D++
Sbjct: 1031 -RIRSLITQHAPKIKIMWIPGHSGIKGNELADQAAKSASSMPLILTPN-INTTDIKKHLK 1088
Query: 406 MQHEIQWRENVMSQNNNKGLFYKNLFTITDKK-PWFAKAIP--LRKFIVTFNRLRSNHA- 461
+ +E+++ N +Y+++ T T + ++ P R + RLR H
Sbjct: 1089 ADLATKQKEHII----NCSPWYQSINTNTSHPCDYLKQSHPNWTRLDQIKIIRLRLGHTN 1144
Query: 462 -ICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
Q YL+ N PT C C + HI CP
Sbjct: 1145 ITHQHYLNP-NSIPT--CPFCQGDISLNHIFNSCP 1176
>gi|407915534|gb|EKG09113.1| hypothetical protein MPH_13896 [Macrophomina phaseolina MS6]
Length = 288
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 290 ATIFTAEAFAILQALKYV---SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIF 346
AT+F A+ +AI AL ++ + + + TD+++ L L + + +L+ I
Sbjct: 13 ATVFAAKLWAIEMALDLADVETAHNKRRIALFTDNQAALRAL--VTPGEQSEQYLLRSIT 70
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
L+ LQ+ +S++F WV H G+ GNE D+LAK A
Sbjct: 71 PKLTGLQQQGVSIKFHWVPSHRGVPGNEEADKLAKAAA 108
>gi|321453153|gb|EFX64418.1| hypothetical protein DAPPUDRAFT_266424 [Daphnia pulex]
Length = 352
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 23/272 (8%)
Query: 240 AEAFAILQALKY----ASSIKEKEAGYCKVSIRE-SLWIFDTQNKNSGTFKLKNFATIFT 294
+EA A+ +K+ AS+I + K + + S I + N T +N +++FT
Sbjct: 50 SEARALFNQIKHNHFNASTIAYTDGSLNKSTGKTTSAVIIPSLNIEEATTLSRN-SSVFT 108
Query: 295 AEAFAILQALKYVSSIKEN--EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHL 352
EA AI + L+ V + + ++ I +DS+S ++ +++ K +I I +L
Sbjct: 109 VEAEAINRTLELVYHLDDEVAKLTIFSDSRSVVQSIESPKKEK---YPIINAILTTADNL 165
Query: 353 QEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRA-VTDMQHEIQ 411
+ + W+ H GI GN A DRLA E + P + ++ ++ +
Sbjct: 166 KSAGTKINLYWIPSHVGIPGNGAADRLASEESNQL-------FPSRSLKNFLSSAEQAAV 218
Query: 412 WRENVMSQNNN---KGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLH 468
++E + N N KG + N T T + R +LR+ H +A L
Sbjct: 219 FKEYLRKININELHKGRYKDNTHTRTKTGALKWHSHKSRNITRVLFKLRTGHNRLKANLA 278
Query: 469 KINIAPTNLCQECL-EREDMAHIILCCPKYQV 499
+ N CQ C E E H++L P +++
Sbjct: 279 RFNNQLDPTCQFCEDEDESKKHVLLEYPAFEL 310
>gi|390598681|gb|EIN08079.1| RnaseH-domain-containing protein, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 382
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 35/241 (14%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL---DIFKALS- 350
E A+L AL+ + + ++ TDS +E L + + + D+FKA +
Sbjct: 14 GEIVAVLVALQTTAPFEH--ILFKTDSMYVIEGLTRHLAKWEDIGWIEIKNADLFKATAF 71
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE-----TARGTDALNPYPIPVQDVRAVTD 405
HL+ + F+WV+GH+G GNE D LA+E A D P ++ R +
Sbjct: 72 HLRRRSAPTDFLWVKGHSGEEGNEMADALAREGVMKQIADDIDLGVPAEFDLRGAR-LAS 130
Query: 406 MQHEIQWRENVMSQNNNKGLFYKNLF---------------TITDKKPWFAKA-----IP 445
M + +R +M++ G+ L ++D+ W + P
Sbjct: 131 MSQSLLYR-GIMNRQGPTGVRRAALAPLDMARHAIADLNGSMLSDEALWMSTRRKDLRTP 189
Query: 446 LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVTLAIAL 505
+R+F+ F L ++H I + + A C C E E M HI++ C + + + L
Sbjct: 190 IRQFL--FRALHNSHRIGGFWRNIPGYAEREKCAYCGEEESMEHIMIECERSRCMIIWDL 247
Query: 506 V 506
V
Sbjct: 248 V 248
>gi|426198364|gb|EKV48290.1| hypothetical protein AGABI2DRAFT_58493, partial [Agaricus bisporus
var. bisporus H97]
Length = 401
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 291 TIFTAEAFAILQAL---KYVSSIKEN-----EVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
T + AEA L A+ K ++S+K V D++S + L N K G I
Sbjct: 131 TTYDAEAVGALLAMHLVKELASLKGTPTNPARVTHYVDNQSIIRAL-NADK--GGTGQHI 187
Query: 343 LDIFK-----ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPV 397
LD ++ A+ H + ++ W+ H+G+ GNE VD AKE A G + + +P
Sbjct: 188 LDAYRRDCARAIGH---GTVEIKLEWISAHSGVQGNEEVDTAAKEAAEGKSSEKKH-LPA 243
Query: 398 QDVRAVTDMQHEIQW-----RENVMSQNNNKGLFYKNLFTITDKKPW--FAKAIPLRKFI 450
+ + + I+ + + + Y + I D P+ F K R+++
Sbjct: 244 KCHMQLPHSKAAIKQAKMEELKKREKKEWKESPRYDRMNRIDDAYPYENFKK---WREYM 300
Query: 451 VT-----FNRLRSNHAICQAYLHKINIAPTNLCQECLER------EDMAHIILCCPKYQV 499
++RSNH YL +I + C +CL+ E + H +L C Y
Sbjct: 301 TRAQGSILTQIRSNHLPINTYLKRIKKRENDYCDKCLDNTGQRLPETVNHFVLDCSAYDY 360
Query: 500 TLAIALVGSGQDARLVNGGRGFDPTQGFACV 530
I G+ A N R F QG C+
Sbjct: 361 ERDIMKTKLGR-ANAFNLERLFKSEQGTRCL 390
>gi|440484572|gb|ELQ64628.1| LOW QUALITY PROTEIN: hypothetical protein OOW_P131scaffold00595g3
[Magnaporthe oryzae P131]
Length = 482
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 282 GTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
G+ L +F AE L+ L+ + + + + DS S + L+ ++ + +++
Sbjct: 63 GSAALGGPCHVFDAETVGALRGLEAADANPGDTIWVCVDSASVIWGLRGSASLSSQWAYI 122
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP 392
+ + L++ +SVR W GH GI GNE DRLA E A+G +P
Sbjct: 123 --RFHELVEELKDTGVSVRIRWCPGHEGIEGNEKADRLADEGAKGPADTDP 171
>gi|427791855|gb|JAA61379.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 891
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 11/171 (6%)
Query: 247 QALKYASSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKY 306
QA+ Y + G C +I + + SG + + + + E +I+ AL+
Sbjct: 659 QAVAYTDASFVAPRGSCGYAIYHP-QLSAPETHTSGPYL--HPPNVLSLEVLSIVHALES 715
Query: 307 VSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVR 365
SS+ E + +DS + + ++N + P L ++ +A+S LQ + +R WV
Sbjct: 716 FSSLPSVPEYTLFSDSYAAIRHIQNRTL----PHSLEQEVERAVSALQPSTVFLR--WVP 769
Query: 366 GHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENV 416
GH+GI GNE RLA++ + P+P P +D + I R +
Sbjct: 770 GHSGIDGNELAHRLARDILHRAPFI-PWPTPSEDSGSSVKHDGTISLRHTI 819
>gi|393235518|gb|EJD43072.1| hypothetical protein AURDEDRAFT_34025, partial [Auricularia
delicata TFB-10046 SS5]
Length = 132
Score = 54.3 bits (129), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 291 TIFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGN-PSHLILDIFKA 348
T+F AE I AL ++ + NE I D++ + + + +G + I+ +F+
Sbjct: 1 TVFEAELVGIWLALCILADAPDVNEAAICLDNQPAIRRAHDPRPKSGQLITDAIVSMFEG 60
Query: 349 LSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL------NPYPIPVQDVRA 402
+ Q + S+R +WV GH G+ GNE D AK A G +A NP P +RA
Sbjct: 61 I-RAQRPSFSLRLVWVPGHEGVDGNELADLHAKRAAAGKNASRMLLGGNPLPHSAGALRA 119
Query: 403 VTDMQHEIQWR 413
+ ++W+
Sbjct: 120 RSKQDTRLEWQ 130
>gi|427797379|gb|JAA64141.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 544
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 17/220 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
FK + T +E A+L A+K+V ++ I DSK+ L+ +++ + GN L+
Sbjct: 284 FKTSHVTTSTGSELAALLAAMKFVMQESPSKWAIFCDSKAALQCVRSLRR--GNYHQLVS 341
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAV 403
I + + F W+ GH GI+GN D A+ T L IP+ V A
Sbjct: 342 QINEICDRATNQGHDIVFQWLPGHCGISGNHLADNAARCAHNETSTLL---IPLSRVDAA 398
Query: 404 TDMQHEIQWRENVMSQNNNKGLFY----KNLFTITD-KKPWFAKAIPLRKFIVTFNRLRS 458
+++ + N + N Y +NL ++ + P A R+ RL
Sbjct: 399 RELR---RIAHNATLTHWNSPPHYTRRPQNLESLLQLQLPSKAS----RRDATMLCRLWV 451
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
A ++ ++I +A ++ C C E + H++ CP+Y+
Sbjct: 452 GVAFTNSFSYRIGMADSSKCDNCNSAETIDHLLCHCPRYE 491
>gi|391865317|gb|EIT74602.1| reverse transcriptase [Aspergillus oryzae 3.042]
Length = 428
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 20/239 (8%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITD 320
G VSI + WI +N+ G+ + +T++ E I AL + K I + D
Sbjct: 152 GASAVSIAQG-WI---RNRTLGS---EEESTVYAGELTGIRMALHKLRKEKTPATIFV-D 203
Query: 321 SKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
S++ ++ ++N + +G ILD + V+ W+ H G+ GNEA D A
Sbjct: 204 SQAAIQAVQNPRRPSG---QYILDQIYYIIRRYNMQNRVQIRWIPAHIGVPGNEAADEAA 260
Query: 381 KE-TARGTDAL-NPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKP 438
+E T R +A+ + Q R++ D +W ++ + + L + +KK
Sbjct: 261 REGTQRTGEAICLAAAVKRQIRRSIKD-----RWIREWKTEKTGRTTY--RLVEVPNKKI 313
Query: 439 WFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
I + + ++R+ + +L+KIN ++ C L + HI+L CP Y
Sbjct: 314 LDLYEIISKPYASINIQVRTQRNGLRHFLYKINAVDSDQCPCALGSQTARHILLQCPLY 372
>gi|255940992|ref|XP_002561265.1| Pc16g09510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585888|emb|CAP93621.1| Pc16g09510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1249
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 35/225 (15%)
Query: 291 TIFTAEAFAILQALKYVSSIKENE----------VIIITDSKSCLEKLKNTSKSNGNPSH 340
++ AE IL A++ ++ + I++ S S L+ ++ +G
Sbjct: 968 SVHAAELIGILHAIEIINKVASERRRLHAEQVRLATILSGSMSALQAIQTPGNKSGQ--R 1025
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPY-PIPVQD 399
+I I +A + + +++R W+ GH GN++ DRLAKE A +P+ P+ ++
Sbjct: 1026 IIHAILEAAINTKTHGVTIRLQWIPGHCAAPGNDSADRLAKEAA-IPGKTHPFCPLLSRE 1084
Query: 400 ---VRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPW-FAKAI--PL---RKFI 450
VR +Q E +W+E + +G NL TI + P + + + PL R ++
Sbjct: 1085 KAFVRKNIYVQWEKEWKE------SREG---GNLRTIDNALPAKYTRRLYGPLPRNRAYL 1135
Query: 451 VTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
+T +LR+ H + + C C +RE + H++ CP
Sbjct: 1136 LT--QLRTGHCWLSTFAKAFHFQDNGRCV-CGDRETLKHVLWDCP 1177
>gi|427791527|gb|JAA61215.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1298
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 99/263 (37%), Gaps = 50/263 (19%)
Query: 283 TFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
T+KL + +T +E A+ A+ ++ N + DSK+ L+ L + + G+ L+
Sbjct: 991 TYKLCHVSTSTGSELAALRGAVNHIKEQPANRWAVFCDSKAALQCLSSALR-RGSYEQLV 1049
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPI------- 395
+I + L ++ E V F W+ H GI+GN+ D A+E A G +L P+
Sbjct: 1050 WEIREMLHNVTEQGHDVVFQWLPSHCGISGNDLADEAARE-AHGETSLVSIPLSRIDAAR 1108
Query: 396 ----------------------------PVQDVRAVTDMQHE-----IQWRENVMSQNNN 422
P +R + + E + R S N
Sbjct: 1109 YLSKLAQNMTLQMWRTSQFTDQRLYSLDPSLRLRLLPGLSREEDTVLCRLRLGXXSXAQN 1168
Query: 423 KGLFYKNLFTITDKKPW-FAKAIPLRKFI-------VTFNRLRSNHAICQAYLHKINIAP 474
L TD++ + ++ LR RLR A AY KI +A
Sbjct: 1169 MTLQMWRTSQFTDQRLYSLDPSLRLRLLPGLSREEDTVLCRLRLGVAFTNAYSFKIEMAD 1228
Query: 475 TNLCQECLEREDMAHIILCCPKY 497
C +C E + HI+ CP Y
Sbjct: 1229 NAECNDCAVAETIEHILCNCPTY 1251
>gi|427783061|gb|JAA56982.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 460
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 14/221 (6%)
Query: 283 TFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
+FK + + AE A+ AL ++ + I TDSK+ L+ L + + +G L+
Sbjct: 198 SFKTDHPTSSTAAELAALRTALCVLNREQPQRWSIFTDSKAALQSLLSALR-HGPYEQLV 256
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRA 402
+I + E V F W+ H G+ GNE D A+ +G D P+ D A
Sbjct: 257 FEIRHLIHTSSEKGHQVTFQWLPSHCGVIGNEHADNAARSALQG-DKEEVIPLSRSDAAA 315
Query: 403 VTDM-QHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL---RKFIVTFNRLRS 458
+ + +I S++ N + N D IP R+ RL
Sbjct: 316 MLRIVAKDISQPTLHTSRSQNYRQHHLNALRRFD--------IPTGLQRREATLLCRLWL 367
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
A ++Y +I +A LC C E + HI CP+Y V
Sbjct: 368 RVAFTKSYSFRIGMADNALCDVCGTEETLQHIFCDCPRYAV 408
>gi|255946389|ref|XP_002563962.1| Pc20g14870 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588697|emb|CAP86816.1| Pc20g14870 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1659
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 293 FTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHL 352
F+ E AI LK V IK+ ++ ++T +K+ L+N + +G + ++K +S +
Sbjct: 1404 FSTELAAIAHMLKIVVGIKDYKITLLTSNKAAAFTLRNPRRQSGQ--EFVCQMYKLISRM 1461
Query: 353 QEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT---DALNPYPIPVQDVRAVTDMQHE 409
+ S++F W+ A N+ + LAKE AR DAL +P + + +
Sbjct: 1462 RRNGNSIKFHWI---PTTADNKLLG-LAKEQARTAIXEDALPQERVPRMKSTTLNIARSQ 1517
Query: 410 I----QWRENV--MSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAIC 463
+ RENV ++ + L K+ + D+ W K +LR+ A
Sbjct: 1518 AVPSNELRENVGRHAKRVDAALPGKHTRXLYDRLTW--------KEATVLAQLRTGMARL 1569
Query: 464 QAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
YL++IN+A T+ RE + H + C K+
Sbjct: 1570 NRYLNQINVAETDEYDCGXARETVEHFLFRCRKW 1603
>gi|427780325|gb|JAA55614.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 652
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 11/171 (6%)
Query: 247 QALKYASSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKY 306
QA+ Y + G C +I + + SG + + + + E +I+ AL+
Sbjct: 377 QAVAYTDASFVAPRGSCGYAIYHP-QLSAPETHTSGPYL--HPPNVLSLEVLSIVHALES 433
Query: 307 VSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVR 365
SS+ E + +DS + + ++N + P L ++ +A+S LQ + +R WV
Sbjct: 434 FSSLPSVPEYTLFSDSYAAIRHIQNRTL----PHSLEQEVERAVSALQPSTVFLR--WVP 487
Query: 366 GHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENV 416
GH+GI GNE RLA++ + P+P P +D + I R +
Sbjct: 488 GHSGIDGNELAHRLARDILHRAPFI-PWPTPSEDSGSSVKHDGTISLRHTI 537
>gi|358376084|dbj|GAA92654.1| transposon I factor [Aspergillus kawachii IFO 4308]
Length = 231
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD 399
+I I +A + + +++R WV GH+ I GN+ DRLAKE A +P+ +
Sbjct: 17 QIIYAILQAAKNTRTHGVTIRLQWVPGHSEILGNDTADRLAKEAAI-FGKTHPFSPLLSR 75
Query: 400 VRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK-KPWFAKAIPL-RKFIVTFNRLR 457
RA QW E ++ + G K T+ K A+P R +++T ++R
Sbjct: 76 ERAYIRQGILTQW-EQEWKESRDSGHLRKIDNTLPAKYTRRLYGALPRNRAYLLT--QIR 132
Query: 458 SNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
S H Y + C C ERE + H++L CP
Sbjct: 133 SGHFWLSTYGKLFGFRDDDQCL-CGERESIIHVLLDCP 169
>gi|950316|gb|AAA74495.1| unknown protein [Drosophila teissieri]
Length = 1234
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 286 LKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDI 345
L ++++ T+E AIL+A++ + + + + I DS S ++ +KN + ++ P+
Sbjct: 976 LPPYSSVLTSETIAILEAIELIKT-RRGKFGIWFDSLSAIDSIKNPNNNSFYPN------ 1028
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTD 405
+ S + + ++ +W+ GH+GI GNE D+ AK + + P I D++
Sbjct: 1029 -RIRSLITQLAPKIKIMWIPGHSGIIGNELADQAAKLASNMPLIVTPN-INNTDIKRHLK 1086
Query: 406 MQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP---LRKFIVTFNRLRSNHAI 462
+ + +EN+++ N +Y++L T + K R + RLR H
Sbjct: 1087 AELATKQKENIINCNQ----WYQSLNTNNTHTCDYLKQTHQNWTRLDQIKIIRLRLGHTN 1142
Query: 463 CQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
+ H +N P +C C ++HI+ CP
Sbjct: 1143 I-THQHYLNPNPITVCPFCQGDLSISHILNSCP 1174
>gi|358376063|dbj|GAA92634.1| hypothetical protein AKAW_10748 [Aspergillus kawachii IFO 4308]
Length = 399
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 19/241 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIK-ENEVIIIT-----DSKSCLEKLKNTSKSNGN 337
L+ T+ IL A + VS+ E E I+ + + + ++ S+
Sbjct: 109 LHLRLLETVQRTALIRILSAFRTVSTAALEVETYILPTHLRHKQRGQVASARLSTLSDDR 168
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPV 397
P H I ++ + L+ I +R WV GH G GNE DRLAKE A G + +P+ +
Sbjct: 169 PIHEA--IHQSAAELKARGIPLRLQWVPGHCGNPGNETADRLAKE-AVGAEKKHPFQHLL 225
Query: 398 QDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLR 457
+A + +W + + N L N + ++P R +LR
Sbjct: 226 SREKAFIRNTIKSEWEQEWKTSKNGGHLRRMNRALPACRTRRLYGSLP-RNRAYLLAQLR 284
Query: 458 SNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVTLAIALVGSGQDARLVNG 517
+ H+ Y + C EC E + H+++ CP+ L Q+ R + G
Sbjct: 285 TGHSWLATYAKQHGFRDNEQC-ECGATETVVHVLVDCPR--------LSALRQELRRIIG 335
Query: 518 G 518
G
Sbjct: 336 G 336
>gi|212535974|ref|XP_002148143.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210070542|gb|EEA24632.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 233
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDM 406
A S L+ V WV GH G+ GNE D+ AK A + + V RA T+
Sbjct: 2 AASRLRLSGRPVTIQWVPGHNGVEGNEQADQAAKRAASKPAGPGFGGLSLAYVRRACTEA 61
Query: 407 QHEI--QW-RENVMSQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRS 458
+ W REN + + +G YK L + K P ++ + +L++
Sbjct: 62 RRAAVENWVRENAVQGAHRRGRVYKMPRGWGLDRVAAKAP--------KRVASRYYQLKT 113
Query: 459 NHAICQAYLHKINIAPTNLCQECLE-REDMAHIILCC 494
HA YLH+I + C+ C E RE ++HI+ C
Sbjct: 114 GHAPIGTYLHRIKARDSPECRACGELRERVSHILFEC 150
>gi|321472863|gb|EFX83832.1| hypothetical protein DAPPUDRAFT_100218 [Daphnia pulex]
Length = 554
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 79/217 (36%), Gaps = 29/217 (13%)
Query: 286 LKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDI 345
LKNF F AE +AI QAL +++ + + I S K SNG
Sbjct: 307 LKNFTNSFNAELYAIRQALYHLNKYEMDSTIQPPSSLIQNLPFKQYPTSNGR-------- 358
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG-TDALNPYPIPVQDVR--- 401
+ W+ HAGI GNE D+LA + + DVR
Sbjct: 359 -----------TRITLTWIPSHAGIVGNEIADQLATNIRKNRRNTTTKTITNKIDVRQNI 407
Query: 402 AVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
A H+ + + +Q+ N + + F PW R RLRS H
Sbjct: 408 ATAKANHKNITFQKLKTQSTNMAVTSRECFGYL---PWHTNK--KRTIQSALFRLRSGHN 462
Query: 462 ICQAYLHKINIAPTNLCQE-CLEREDMAHIILCCPKY 497
++ ++ C C ERED H++L C Y
Sbjct: 463 KLNHFISRLEPETLADCPNGCPEREDATHVLLHCQHY 499
>gi|542601|pir||S37765 hypothetical protein - fruit fly (Drosophila miranda) transposon
TRIM
Length = 426
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 107/237 (45%), Gaps = 28/237 (11%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENE--VIIITDSKSCLEKLKN 330
++ ++ + S F+L + ++F AE AI +A+ VS ++ + V + +DS++ ++ L +
Sbjct: 163 VYCSELEISHCFRLPDHCSVFQAEIEAIKEAISIVSKLRLDTHLVCVFSDSQAAIKALGS 222
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE--TARGTD 388
S ++ + D ++L + E + + IWV GH I GN+A D LA++ T
Sbjct: 223 ISSNSAT----VKDCRRSLHEIAE-QLDLFLIWVPGHRDIEGNDAADELARQGTTIPLLS 277
Query: 389 ALNPYPIPVQDVRAVTDMQHEI-------QWRENVMSQNNNKGLFYKNLFTITDKKPWFA 441
+P+ R +T HE+ +W++ V + + Y++ +
Sbjct: 278 EREQVAMPLATCRLLT---HELFEQNANRRWQQTVSCKVSRLICSYRS----KKRSAELY 330
Query: 442 KAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECL---EREDMAHIILCCP 495
+ + F VT R + H + +++I + C+ C E E + H CP
Sbjct: 331 RLSRAQCFAVT--RAITGHWQIGTHASRLSIPHNDFCRSCRDEEEEESVLHFFCHCP 385
>gi|443691945|gb|ELT93673.1| hypothetical protein CAPTEDRAFT_224783 [Capitella teleta]
Length = 354
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 291 TIFTAEAFAILQALKYVSSIK-ENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
+I+TAE AI QAL ++ ++K E++ I + S S L L N ++ +L I
Sbjct: 2 SIYTAELIAIEQALIFIETMKDEDQFNICSYSLSSLTALSNCDITH----PYLLSILSKQ 57
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHE 409
++L V F+W H GI GNE DRLAK+ + P+P D ++ +
Sbjct: 58 NNLVRKGKLVVFVWCPSHLGILGNEVADRLAKQAL--VMPVTKLPLPQTDYKSPIRSYVK 115
Query: 410 IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP 445
W+ +V G F D++P + + P
Sbjct: 116 SLWQNDVPGCGCPSG---TGPFASPDERPTPSISTP 148
>gi|294951625|ref|XP_002787074.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239901664|gb|EER18870.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 370
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVS--SIKENEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
FKL+ FATI E AI +AL+++S + + E ++ TDS++ + ++ + +
Sbjct: 109 FKLERFATIHQCELEAIRRALRWLSYSAHRGIEWLLFTDSQASIRTIRGREATERSA--- 165
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYP------I 395
I + ++HL ++ V+ W GH G+ NEAVD+LA G L P +
Sbjct: 166 ---IARDIAHLS-LHVKVQLNWCPGHEGVQWNEAVDQLANT---GRKQLFPLDRGAALMV 218
Query: 396 PVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNR 455
P V+ Q E R + + G ++ F KA K +
Sbjct: 219 PPSFVKHQLKTQMEKDTRSWWLEKRATLGTSVRDFLWGFSHARRFLKAG---KSSPELSA 275
Query: 456 LRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVTLAIALVGSGQDARLV 515
L HA + H + + C D+ HI+ CP L G+ +D+RL+
Sbjct: 276 LILGHAPTPHHRHTMGLRTDPSCPCGHADGDVKHILRDCP--------LLDGARRDSRLL 327
Query: 516 N 516
Sbjct: 328 Q 328
>gi|1335691|emb|CAA41925.1| unnamed protein product [Drosophila miranda]
Length = 521
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 107/237 (45%), Gaps = 28/237 (11%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENE--VIIITDSKSCLEKLKN 330
++ ++ + S F+L + ++F AE AI +A+ VS ++ + V + +DS++ ++ L +
Sbjct: 258 VYCSELEISHCFRLPDHCSVFQAEIEAIKEAISIVSKLRLDTHLVCVFSDSQAAIKALGS 317
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE--TARGTD 388
S ++ + D ++L + E + + IWV GH I GN+A D LA++ T
Sbjct: 318 ISSNSAT----VKDCRRSLHEIAE-QLDLFLIWVPGHRDIEGNDAADELARQGTTIPLLS 372
Query: 389 ALNPYPIPVQDVRAVTDMQHEI-------QWRENVMSQNNNKGLFYKNLFTITDKKPWFA 441
+P+ R +T HE+ +W++ V + + Y++ +
Sbjct: 373 EREQVAMPLATCRLLT---HELFEQNANRRWQQTVSCKVSRLICSYRS----KKRSAELY 425
Query: 442 KAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECL---EREDMAHIILCCP 495
+ + F VT R + H + +++I + C+ C E E + H CP
Sbjct: 426 RLSRAQCFAVT--RAITGHWQIGTHASRLSIPHNDFCRSCRDEEEEESVLHFFCHCP 480
>gi|242825777|ref|XP_002488508.1| hypothetical protein TSTA_109310 [Talaromyces stipitatus ATCC
10500]
gi|218712326|gb|EED11752.1| hypothetical protein TSTA_109310 [Talaromyces stipitatus ATCC
10500]
Length = 466
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Query: 251 YASSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI 310
+ +S ++ G V++ ++ I Q G+ + + +++TAE AI A+ V I
Sbjct: 134 FNASGQQNALGAAAVALDQNHNIIQHQKVCIGSIE---YWSVYTAELMAIYYAISLVLKI 190
Query: 311 K-ENEVI---------IITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
EN+VI I++DS S L+ + NT +G +I + +A L+ I +
Sbjct: 191 AMENQVILVGQQEPATILSDSMSALQAISNTRNKSGQ--RIIQAVQQAAQELKARGIPLC 248
Query: 361 FIWVRGHAGIAGNEAVDRLAKETARGTDALNPY 393
W+ GH GNEA +RLAKE A D +P+
Sbjct: 249 LQWMPGHCDNPGNEAANRLAKE-AVSLDKEHPF 280
>gi|425776684|gb|EKV14892.1| Reverse transcriptase, putative [Penicillium digitatum PHI26]
Length = 994
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 290 ATIFTAEAFAILQALKYV-----------SSIKENEVIIITDSKSCLEKLKNTSKSNGNP 338
AT++ AE AI AL+ + + E +I TD+++ L+ +KN +G
Sbjct: 792 ATVYAAELHAIEMALEVIQYQFTSNDDWRERLAERGAVIFTDNQAALKAIKNPKMPSGQ- 850
Query: 339 SHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
+ + L + I V W+ H GI GNE VD LAK A TD N
Sbjct: 851 -VYLEGSLRVLDWCSKSKIQVELRWIPAHEGIPGNEHVDMLAKSAATTTDTSN 902
>gi|383859911|ref|XP_003705435.1| PREDICTED: armadillo repeat-containing protein 4-like [Megachile
rotundata]
Length = 999
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 17/185 (9%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
S T L + + IF+AE IL A+ + K +S S LE L + S
Sbjct: 751 SFTRSLNHASLIFSAECHGILMAVNLANKAK--------NSFSVLEALDGRVFCQRSFSL 802
Query: 341 L--ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQ 398
L I + A L + F+W+ + GI NE D AK + + N + +P
Sbjct: 803 LKEIKEELNAFETLASPGRRIAFVWIPSYRGILNNERADAAAKLASNISGEFN-FKVPYT 861
Query: 399 DVRAVTDMQHEIQWRENV---MSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNR 455
D + +I W+ ++ + + +KG Y N + ++KPWF R+ V NR
Sbjct: 862 DFSPIL---KDIMWKNSISRWLGEAASKGSSYFNTYFEPNRKPWFFNRNLPRRTTVWVNR 918
Query: 456 LRSNH 460
R NH
Sbjct: 919 YRLNH 923
>gi|225710246|gb|ACO10969.1| Ribonuclease H1 [Caligus rogercresseyi]
Length = 257
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK---NTSKSNGNPSHLILDIFKALS 350
+AE AI QA++ V + +V+I TDSK + ++ K NG D+
Sbjct: 159 SAEIQAISQAIQSVKNEGRTKVVIYTDSKFAINSVELWLEGWKQNGWKKSSGGDVINKAD 218
Query: 351 HLQ----EWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+Q +SV+FI VRGH GI GNE D+LA+E A+
Sbjct: 219 FIQLDDIRKGMSVKFIHVRGHQGIHGNEMADQLAREGAQ 257
>gi|342867783|gb|EGU72563.1| hypothetical protein FOXB_16927 [Fusarium oxysporum Fo5176]
Length = 1790
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 117/320 (36%), Gaps = 75/320 (23%)
Query: 195 DKWPNAYLIFTDGSKTSESVASAFY--DTQNKNSGTFKLQNFATIFTAEAFAILQALKYA 252
+K P+A I+TDGS+ + V SA T S +T++ E + AL+ A
Sbjct: 1482 EKEPDAIHIYTDGSRINGHVGSAAVCTTTNQAKSAYMGEDTVSTVYAGELQGVSLALQIA 1541
Query: 253 SSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKE 312
Q+++ G + K
Sbjct: 1542 Q-----------------------QDRDQGNVRTK------------------------- 1553
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAG 372
V+I TD+++ + + +G S+L+ DI + + L+ + V W+ H GI G
Sbjct: 1554 --VMIYTDNQAAIRSVARPRGKSG--SYLLQDITQRIQTLRAQGLPVEVRWIPAHKGIYG 1609
Query: 373 NEAVDRLAKETARGTDALNPYPIPVQD-------------VRAVTDMQHEIQWRENVMSQ 419
NEA DR AKE P P Q R V + + + QW + +
Sbjct: 1610 NEAADRAAKEATGWRQRGPPGPRAQQPPILRSLKATLKMWSRRVVNRRWQAQWHQETRGR 1669
Query: 420 NNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAP-TNLC 478
+ + K FAK + + +LR+ +L + + T+
Sbjct: 1670 ATFRHTPEPTPRVLQPHK-HFAK-----RQSAIYTQLRTEKIGMNDFLFRQRVPGFTDPG 1723
Query: 479 QECLE-REDMAHIILCCPKY 497
+C E R+ +AHI+L C K+
Sbjct: 1724 CDCREGRQTVAHILLQCRKH 1743
>gi|443733872|gb|ELU18078.1| hypothetical protein CAPTEDRAFT_197082 [Capitella teleta]
Length = 400
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 20/221 (9%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH-LI 342
+L + A+IF+AE AI + L + + S S L N N H +
Sbjct: 32 IRLPDSASIFSAELLAIYKVLTLLECSA-------SSSSSTDSLLSLQGIGNFNIKHPYV 84
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRA 402
+ I + + L + I + W H G+ GNE D LAKE T IP D +
Sbjct: 85 VKILEKCTLLHKKGIDLVMTWCPSHVGVMGNERADLLAKEALSFTTCT--IRIPSSDFKP 142
Query: 403 VTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK-KPWFAKAIPLRKFIVTFNRLRSNHA 461
+T ++ +W+E S+ NK L+ I W + +R+ + R R H+
Sbjct: 143 ITHEFYKEKWQEQWSSEQENK------LYCIQPTLGKWAKSSREIRREEIVLARARIGHS 196
Query: 462 -ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVTL 501
+ YL + + P +C C + HI + C + + L
Sbjct: 197 HLTHGYLLRREMPP--VCIPCQNILSIKHIFIECVDFDILL 235
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD 399
H +L I ++L V FIW + GI GNE DRLAK+ + P+P D
Sbjct: 249 HYLLSILNKQNNLDRKGKLVVFIWCPSYVGILGNEVADRLAKQAL--VMPVTKLPLPHTD 306
Query: 400 VRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
++ + W+ + +NK + + + ++ P F A
Sbjct: 307 YKSPIRSYVKSLWQNERDEETDNKLHTIQPIMEMNEEGPSFHLA 350
>gi|255931687|ref|XP_002557400.1| Pc12g05560 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582019|emb|CAP80183.1| Pc12g05560 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 334
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 23/219 (10%)
Query: 291 TIFTAEAFAILQALKYVSSIKENE----------VIIITDSKSCLEKLKNTSKSNGNPSH 340
++ AE IL A++ V+ + I++DS S L+ ++ +G
Sbjct: 53 SVHAAELIGILHAIEIVNKVASERRRLHGEQVRLATILSDSMSALQAIQTPGNKSGQ--R 110
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
+I I +A + + +++R W+ GH GN++ DRLAKE A +P+ +
Sbjct: 111 IIHAILQAAINSKTHGVTIRLQWIPGHCAAPGNDSADRLAKEAAI-PGKTHPFCPLLSRE 169
Query: 401 RAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPW-FAKAI--PL-RKFIVTFNRL 456
+A QW + NL TI + P + + + PL R +L
Sbjct: 170 KAFVRKNIYDQWEKEXKESKEG-----GNLRTIDNALPAKYTRRLYGPLTRNRAHLLTQL 224
Query: 457 RSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCP 495
R+ H + + + C C +RE + H++ CP
Sbjct: 225 RTGHCWLSTFAKAFHFQDNDRC-VCGDRETLKHVLWDCP 262
>gi|358376777|dbj|GAA93294.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 255
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENE--VIIITDSKSCLEKLKN 330
+FD + + IF A + + K + + I++DS S L+ ++N
Sbjct: 83 VFDASGQQNHLGAAAELMAIFYAISLVLQVTTKRQGRLDRGKQPATILSDSMSALQAIRN 142
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
++ +G +I I +A S + I +R WV GH GN+ DRLAKE A G +
Sbjct: 143 SANKSGQ--RIIRAILQAASEMIARGIPIRLHWVPGHCNDPGNDEPDRLAKE-AVGPRKM 199
Query: 391 NPY 393
+P+
Sbjct: 200 HPF 202
>gi|307206121|gb|EFN84201.1| hypothetical protein EAI_09989 [Harpegnathos saltator]
Length = 101
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
F L + IF AE A+L AL+ N+ II TDS+S + + S + +IL
Sbjct: 3 FSLSSLIFIFGAEITALLHALRISDERNLNKAIIATDSRSAVSSILKVSDAKYTHPWIIL 62
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
I L L V+ +W+ H I GNE D L K+
Sbjct: 63 -IKDILYQLHRRGTIVKLLWIPSHCDIVGNERTDALTKK 100
>gi|294890537|ref|XP_002773203.1| hypothetical protein Pmar_PMAR009197 [Perkinsus marinus ATCC 50983]
gi|239878227|gb|EER05019.1| hypothetical protein Pmar_PMAR009197 [Perkinsus marinus ATCC 50983]
Length = 164
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 276 TQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKE-----NEVIIITDSKSCLEKLKN 330
T + + ++KL +IF AE A+ +A+ + + E EVII++DS+ L+ L
Sbjct: 14 TGRQTACSYKLHPDCSIFQAELSAVDKAIAFAMATAEEYGPSTEVIILSDSQVVLKSLTP 73
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE-TARGTDA 389
++ L + I + H + I V F WV H G+ NE +D LA E +RG
Sbjct: 74 AKQTA-----LSIAIRRRYQHCEASGIYVTFAWVGAHFGVHYNERMDELANEGRSRGVPE 128
Query: 390 LNPYP 394
P P
Sbjct: 129 DIPLP 133
>gi|156043837|ref|XP_001588475.1| hypothetical protein SS1G_10922 [Sclerotinia sclerotiorum 1980]
gi|154695309|gb|EDN95047.1| hypothetical protein SS1G_10922 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 824
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 87/216 (40%), Gaps = 23/216 (10%)
Query: 295 AEAFAILQALKYVSSI--KENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHL 352
E F + +A++Y SSI + I +D+++ L +LK S G + + KA +
Sbjct: 535 VELFGVTRAIEYASSIAYTGQKFKIYSDNQAGLYRLKTPSDHPGQANQI--RAIKAAEVI 592
Query: 353 QEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQW 412
+ + WV GH + GNE D+LAKE N + + + QW
Sbjct: 593 RAKGAEISLNWVPGHTSVEGNELADKLAKEATTIQPTSNETSFGL--LGMIVKEYASDQW 650
Query: 413 RENVMS---QNNNKGLFYKNLFTITDKKPW-FAKAIPL-----RKFIVTFNRLRSNHAIC 463
+ + ++N Y LF PW I L R F +L+ H
Sbjct: 651 LDTLKQYELRSNQSPSTYSKLF------PWKIGSKIKLPSGTTRNTASAFFQLKLGHGYI 704
Query: 464 QAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++YLH + N C C E H+++ CP Y+
Sbjct: 705 KSYLHHFKLT-NNKCI-CNNIEASQHLLISCPIYKT 738
>gi|353245275|emb|CCA76308.1| hypothetical protein PIIN_10303 [Piriformospora indica DSM 11827]
Length = 199
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 28/158 (17%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKET-ARGTDALNPYP------IPV------QDVRAVTD 405
+ +W+ GH GNEA D+ AK+ GT + + P +P Q+++ +
Sbjct: 50 MELMWLPGHEAAEGNEAADKEAKKAITEGTSSRDDLPGWLRHSLPANLLAVKQELKRIAK 109
Query: 406 MQHEIQWRENVMSQNNNKGLFYKNLFTITDKKP---WFAKAIPL-RKFIVTFNRLRSNHA 461
+ +WRE+ +K I + P + A L R+ +L + H
Sbjct: 110 TEARDRWRESRR---------FKRAAKIDETMPSGKYLALTDELTRREAALLTQLLTGHT 160
Query: 462 ICQAYLHKINIAPTNLCQECLER--EDMAHIILCCPKY 497
++++IN A T C C ER E + H++ CPKY
Sbjct: 161 CLNGHVNRINRAETPWCPHCGERNYETLTHVLYICPKY 198
>gi|358376801|dbj|GAA93312.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 316
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENE--VIIITDSKSCLEKLKN 330
+FD + + IF A + + K + + I++DS S L+ ++N
Sbjct: 52 VFDASGQQNHLGAAGELMAIFYAISLVLQVTTKRQGRLDRGKQPATILSDSMSALQAIRN 111
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
+ +G +I I +A S + I +R WV GH GN+ DRLAKE A G +
Sbjct: 112 PANKSGQ--RIIRAILQAASEMIARGIPIRLHWVPGHCNDPGNDEPDRLAKE-AVGPRKM 168
Query: 391 NPY 393
+P+
Sbjct: 169 HPF 171
>gi|427784659|gb|JAA57781.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 454
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 10/217 (4%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
F+ + T AE A+ A+KY+ + N I DS+S L+ L+ + +G +
Sbjct: 193 FRYSHITTSTAAELAALQGAVKYILQQRPNRWAIFCDSRSALKALRLALR-HGLHEQSVY 251
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAV 403
+I E + F + H GI GN+ D A+ +A D P P+
Sbjct: 252 EIRHDYHEELEEGHDIIFELLPSHCGIVGNDHADEAAR-SAHDQDLRTPIPL------LR 304
Query: 404 TDMQHEIQ--WRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
TD +Q R + Q N +G + L +I + R+ R+ A
Sbjct: 305 TDAARRLQSLARRIGLLQWNTQGFYNARLCSIDPNLQLRLPSGLSRRDETLLCRMWLGVA 364
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
AY I +A + C C E + HI+ CP YQ
Sbjct: 365 FTNAYSCLIGMASSAACNICACEETLEHILCHCPSYQ 401
>gi|2454622|gb|AAB71689.1| reverse transcriptase [Magnaporthe grisea]
Length = 1295
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 14/210 (6%)
Query: 292 IFTAEAFAILQALKYVSSIKENEVIII-TDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AEA L+ L+ + + I I DS S + L+ + + L+ +
Sbjct: 1008 VFDAEAIGALKGLQAAAKAQPGARIWICVDSTSVIWGLRGDAPRSSQ--WAFLEFHNLVD 1065
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP------YPIPVQDVRAVT 404
L++ + VR W GH GI GN+ D LAK + G +P Y +RA+
Sbjct: 1066 LLRKQSTEVRVRWCPGHQGIPGNDRADELAKAGSAGPPDPDPRAQQTTYSGAGTVLRAIL 1125
Query: 405 DMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQ 464
+ WR+ + ++ + + F T +K +P R + + +R+ H +
Sbjct: 1126 SNIEKDWWRKELCERSP---AYREWKFQYTPRKEPEELRLP-RPLLGHYLAMRTGHGDFK 1181
Query: 465 AYLHKINIAPTNL-CQECLEREDMAHIILC 493
AY + N N C C +R H + C
Sbjct: 1182 AYHDRFNHQDANTSCAWCWKRTSPEHPVHC 1211
>gi|389581298|ref|ZP_10171325.1| ribonuclease HI [Desulfobacter postgatei 2ac9]
gi|389402933|gb|EIM65155.1| ribonuclease HI [Desulfobacter postgatei 2ac9]
Length = 238
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 16/123 (13%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLE------ 326
+F+T SG F N T E A++ AL+ + + + + +DS+ +
Sbjct: 104 VFETGETFSGGF---NLTTNNRMELLAVIVALEALKG-ETRPICLYSDSRYVVNGITKNW 159
Query: 327 ----KLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
K K KS+G+P+ + D+++ L L + +RFIWV+GHAG NEA D LA
Sbjct: 160 AKSWKRKGWKKSDGSPA-MNPDLWQRLLDLLP-GLDIRFIWVKGHAGNPLNEACDHLANS 217
Query: 383 TAR 385
TAR
Sbjct: 218 TAR 220
>gi|294945288|ref|XP_002784605.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239897790|gb|EER16401.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 741
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 19/247 (7%)
Query: 252 ASSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYV--SS 309
S +K+++ G V R+ + + +S +KL +ATI E +L+A+++V ++
Sbjct: 463 GSVVKDRKTGAGMVVYRKGVEV------HSNYWKLSPYATITDCELLGVLEAVRWVILTT 516
Query: 310 IKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAG 369
E E + TDS++ L+ L + S + + L E V F W+ GH+G
Sbjct: 517 EGEEEWAVFTDSQAVLKILSSRSTVARRDKARQITLL-----LAEIPDKVTFHWLPGHSG 571
Query: 370 IAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKN 429
+ N+ D LA + A + I V+ +R + R + G +
Sbjct: 572 MFANDRADELAAKGASMMEVSAETEISVKTLRRYQAEAGRLALRRWWSDKRAGLGTCVND 631
Query: 430 L-FTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMA 488
+ + + W I V F R A A+LH+ + + +C ++
Sbjct: 632 FSYCASHARLWSRGEITPAGSAVVFGR-----APTPAHLHRCGVIDSPVCDCGAPVGNLR 686
Query: 489 HIILCCP 495
H++ CP
Sbjct: 687 HLLRSCP 693
>gi|242797976|ref|XP_002483073.1| hypothetical protein TSTA_009600 [Talaromyces stipitatus ATCC
10500]
gi|218716418|gb|EED15839.1| hypothetical protein TSTA_009600 [Talaromyces stipitatus ATCC
10500]
Length = 701
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD 399
H+I ++ L+ I +R WV GH G GNEA DRLAKE A G D +P+ +
Sbjct: 225 HIIQHRKQSARELKARGIPLRLQWVPGHCGDPGNEAADRLAKE-AVGLDKEHPFQHLLSR 283
Query: 400 VRAVTDMQHEIQWRENVMSQNNNKGL--FYKNLFTITDKKPWFAKAIPL-RKFIVTFNRL 456
+ + + +W + N L +NL + ++ + ++P R +++T +L
Sbjct: 284 EKGFIRNRIQEEWERGWKTSKNGGHLRRIDRNLPAVRTRRMY--GSLPRNRAYLLT--QL 339
Query: 457 RSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
R+ H+ + + C EC E + H+++ CPK +
Sbjct: 340 RTGHSWLATHGKLHGHREDDKC-ECGAIETVVHVLIHCPKLKT 381
>gi|392586550|gb|EIW75886.1| hypothetical protein CONPUDRAFT_169130 [Coniophora puteana
RWD-64-598 SS2]
Length = 265
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 93/235 (39%), Gaps = 33/235 (14%)
Query: 334 SNGNPSH-LILDIFKALSHLQEW--NISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
S+ P H L+ I++ LQ ++ V F W+ GH GI GNE D AK A
Sbjct: 31 SSPTPGHYLVPPIWRLARRLQTQLQDVGVVFTWLAGHRGIEGNERADEEAKNAATEGRQA 90
Query: 391 N-------------PYPIPVQDVRAVTDMQHEIQWRENVMSQNNN-KGLFYKNLFTITDK 436
N P I + V D++ R + + + + L Y + TD+
Sbjct: 91 NGGRVLPKHLRGVLPASISALKQKMVADLKATWSQRWALAERAHRLRALGYNAV--ATDR 148
Query: 437 KPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLE--REDMAHIILCC 494
A+P R+ + LR+ H A+LH+I + C+ C E + H + C
Sbjct: 149 HISQISALPRRQGTL-LTHLRTRHIALDAFLHRIRVIDDPSCKHCTRGVDETIRHYLFEC 207
Query: 495 PKYQVTLAIALVGSGQDAR----LVNGGRG-------FDPTQGFACVYYEIISKN 538
P ++ +G+ A L+N +G + T+ F +Y +I K
Sbjct: 208 PAWEEARRRLARSAGRKAESLSYLLNSSKGVKLLMSFINSTKRFQQIYGDIDRKK 262
>gi|427783063|gb|JAA56983.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 460
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 89/218 (40%), Gaps = 8/218 (3%)
Query: 283 TFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
+FK + + AE A+ AL ++ + I TDSK+ L+ L + + +G L+
Sbjct: 198 SFKTDHPTSSTAAELAALRTALCVLNREQPQRWSIFTDSKAALQSLLSALR-HGPYEQLV 256
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRA 402
+I + E V F W+ H G+ GNE D A+ +G D P+ D A
Sbjct: 257 FEIGHLIHTSSEKGHQVTFQWLPSHCGVIGNEHADNAARSALQG-DKEEVIPLSRSDAAA 315
Query: 403 VTDM-QHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+ + +I S++ N + N + + R+ RL A
Sbjct: 316 MLRIVAKDISQPTLHTSRSQNYRQHHLNAL-----RRFHIPTGLHRREATLLCRLWLRVA 370
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
++Y +I +A LC C E + HI CP+Y V
Sbjct: 371 FTKSYSFRIGMADNALCDACGTEETLQHIFCDCPRYAV 408
>gi|212531387|ref|XP_002145850.1| reverse transcriptase, putative [Talaromyces marneffei ATCC 18224]
gi|210071214|gb|EEA25303.1| reverse transcriptase, putative [Talaromyces marneffei ATCC 18224]
Length = 900
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 40/250 (16%)
Query: 272 WIFDTQNKNSGTFKLKNFATI--------FTAEAFAILQAL-KYVSSIKENEVIIITDSK 322
+I DTQ N+GT + T+ +TAE AI AL + + + + I++ ++
Sbjct: 604 YIRDTQADNNGTDISRYSITLGKRTEQNPYTAELEAIAVALERILPETCQRWISILSSNR 663
Query: 323 SCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
S L + + +G + I I++ + LQ+ +V IW+ GHA I + R AK
Sbjct: 664 SALSAISQPRQQSGQLT--IRRIYRLIQFLQQRGNAVNAIWIPGHADID----LQRQAKA 717
Query: 383 TAR---GTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNK----------GLFYKN 429
AR GT+ L P P + ++ RE + + K G +N
Sbjct: 718 EARKSTGTERL-PEKQPFHAKSTTIRLALAVRKREWTLPEEVGKYSKALDIALPGKHTRN 776
Query: 430 LFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAH 489
L+ + RK T +LR+ +YL++I A +NLC E + H
Sbjct: 777 LYDGLN-----------RKEAKTLAQLRTGMTRLNSYLNRIGAAHSNLCVCGQASETVEH 825
Query: 490 IILCCPKYQV 499
+ C K+ V
Sbjct: 826 FLFRCTKWTV 835
>gi|322786274|gb|EFZ12849.1| hypothetical protein SINV_03908 [Solenopsis invicta]
Length = 84
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 416 VMSQNNNKGLFY-KNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAP 474
+++++ KG+FY N + T K PWF++ R FI NRLRSNH L + N
Sbjct: 8 IVNESRFKGVFYFNNFYNGTKKSPWFSEWNTERYFITLINRLRSNHYNLNESLARKNYIE 67
Query: 475 TNLCQECLEREDMAHII 491
+ C+ E ED+ H++
Sbjct: 68 SERCECGYEAEDIDHMV 84
>gi|393226248|gb|EJD34041.1| hypothetical protein AURDEDRAFT_76517 [Auricularia delicata
TFB-10046 SS5]
Length = 185
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 21/186 (11%)
Query: 314 EVIIITDSKSCLEKLKNTSKSNGNPSHLILD-IFKALS--HLQEWNISVRFIWVRGHAGI 370
+V + D++S + + + +G LI D I KAL+ H + +R WV GH G+
Sbjct: 3 DVAVCLDNQSAIARTDDLVPKSG---QLITDAIHKALAKLHKRRPGFRLRLFWVPGHEGV 59
Query: 371 AGNEAVDRLAKETAR------GTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKG 424
GNE D AK+ A T +N P+P+ + + + ++ +G
Sbjct: 60 DGNELADLHAKKAAAREASPLATCTINGEPLPISAAALCATCKQDSLRQWQCRWADSPRG 119
Query: 425 LFYKNLFTITDKKPWFAKAIPL-----RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQ 479
L Y D P AK + R V +L + H YLH+I + +C
Sbjct: 120 LRYAKF----DSAPPSAKVPRMYHRLCRAQAVVLTQLCTGHVALNQYLHRIGALDSLMCV 175
Query: 480 ECLERE 485
C E E
Sbjct: 176 RCGEPE 181
>gi|353244976|emb|CCA76093.1| hypothetical protein PIIN_10093 [Piriformospora indica DSM 11827]
Length = 1335
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 132/346 (38%), Gaps = 86/346 (24%)
Query: 174 GDQYESAPEYAKQNCFLNEVKDKWPNAYLIFTDGS---KTSESVASA----FYDTQNKNS 226
G Q S E A+ + L E P A ++TDGS + + A ++ Q ++
Sbjct: 1000 GIQGTSKREAAEDHLKLTERLAANPGALAVYTDGSQINRNGHRLTGAGWVLYWRGQERDH 1059
Query: 227 GTFKLQNFATIFTAEAFAILQALKYASS-IKEKEAGYCKVSIRESLWIFDTQNKNSGTFK 285
G+ L A ++ AE A+ LK A + I + E + K + +++IF NS +
Sbjct: 1060 GSVGLGTSAEVYDAEMTALANGLKGAINFIHQTEDHHPKPT---TIFIF---ADNSSAVR 1113
Query: 286 LKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDI 345
A F+++ + I ++S LE GNP
Sbjct: 1114 SIPIARPFSSQ---------------DASQRFIEAARSFLE---------GNP------- 1142
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTD 405
S+ WV GH GI GNE D +AK +L P P P T
Sbjct: 1143 ----------RASIMIQWVPGHTGIPGNERADEIAKAAC----SLAP-PNP------RTT 1181
Query: 406 MQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA----------IPLRKF----IV 451
+ + ++ N +S++ + N +T TD++ +A A P R+ +
Sbjct: 1182 LSNYLRTARNKLSED------WTNQWTSTDRRSRYAIADRLPPSTLGSYPFRQLDRATLG 1235
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
++R+ H Y + NI C + HI+L CP++
Sbjct: 1236 LVTQIRTGHGYFGEYFARFNIPEQTSCPCGFILQTREHILLDCPRF 1281
>gi|156039980|ref|XP_001587097.1| hypothetical protein SS1G_12126 [Sclerotinia sclerotiorum 1980]
gi|154696183|gb|EDN95921.1| hypothetical protein SS1G_12126 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 455
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 18/236 (7%)
Query: 153 RDKRGIPPDPGKGSGNATQDDGDQYESAPEYAKQNCFLNEVKDKWPNAYLIFTDGSKTSE 212
R +R P P Q++ + ++S YA++ L + P A +T+ S+T E
Sbjct: 212 RTRRLDPYHPLAWRSEWIQENPNSFKS--RYARRIASLRPSEQINPLAAPKWTE-SETRE 268
Query: 213 SVASAFYDTQNKNSGT--FKLQNFATIFTAEAFAILQALKYASSIKEKEAGYCKVSIRES 270
V + +N+ T NF + + I S GY V + +
Sbjct: 269 EVLDRIHGPKNRTKSTTAVDFNNFYNLLPRDDIVIFSD---GSKQANGSTGYGFVEYQNN 325
Query: 271 LWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKN 330
I + G+F L+ ++ +A A L+ L+ ++I E I TD CL+ ++
Sbjct: 326 YKICE------GSFALEKMKEVYNTKAIAALEGLR--AAIVSIEARIATDIWICLDNIEV 377
Query: 331 TSKSNGNPSHLILDIFKALSHL-QEW-NISVRFIWVRGHAGIAGNEAVDRLAKETA 384
++ N IF + L W N +VR WV GH IAGNEA +++ K A
Sbjct: 378 ATRLLSNSIGSSQKIFTSFRQLASSWLNGTVRIRWVPGHKDIAGNEAANKVIKANA 433
>gi|407920660|gb|EKG13846.1| hypothetical protein MPH_08978 [Macrophomina phaseolina MS6]
Length = 606
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 311 KENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGI 370
++ + + TD+++ L L S+ +G +L+ I L LQ+ + + F WV H G+
Sbjct: 358 RKRRIAVFTDNQAALRALVTPSEQSGQ--YLLRSIIAKLIGLQQQGVLIEFHWVPSHQGV 415
Query: 371 AGNEAVDRLAKETA-------RGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNK 423
GNE DRLAK A GT L+ V ++ +W++ + ++ +
Sbjct: 416 PGNEEADRLAKAAALEGRASEHGTQ-LHARTSLVAALKQTISQAEMDEWKQ--LWKDGER 472
Query: 424 GLFYKNLFTITDKKPWFAKAI---PLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQE 480
G + LF + + A+ LR ++R+ + +LH+ + P E
Sbjct: 473 G---RQLFKVAPEPTRKILALHRGTLRTLGSLIVQMRTGKIGLRHFLHQRKV-PGVTSGE 528
Query: 481 CL---EREDMAHIILCCPKY 497
C+ + ++H++ C K+
Sbjct: 529 CVCGRGLQTVSHVLYTCSKF 548
>gi|427784657|gb|JAA57780.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 454
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 16/221 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
F+ + T AE A+ A+KY+ + N I DS+S L+ L+ + +G +
Sbjct: 193 FRYSHITTSTAAELAALQGAVKYILQQRPNRWAIFCDSRSALKALRLALR-HGLHEQSVY 251
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAV 403
+I E + F + H GI GN+ D A+ +A D P P+
Sbjct: 252 EIRHDYHEELEEGHDIIFELLPSHCGIVGNDHADEAAR-SAHDQDLRTPIPL------LR 304
Query: 404 TDMQHEIQ--WRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP---LRKFIVTFNRLRS 458
TD +Q R + Q N +G + L +I P ++P R+ +
Sbjct: 305 TDAARRLQSLARRIGLLQWNTQGFYNARLCSI---DPNLQLSLPSGLPRRDATLLCSMWL 361
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
A AYL I +A C C E + HII CP Y+
Sbjct: 362 GVAFTNAYLCLIGMASRAACNICACEETLEHIISHCPSYRT 402
>gi|358376670|dbj|GAA93204.1| hypothetical protein AKAW_11316 [Aspergillus kawachii IFO 4308]
Length = 452
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Query: 253 SSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIK- 311
+S ++ G V++ E L I +++ + G+ + +++ AE A A+ V +
Sbjct: 18 ASGQQNHLGAAAVALNEDLQISESRQVSIGSME---HWSVYAAELMAFFYAISLVLQVTW 74
Query: 312 ---------ENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFI 362
E+ I++DS S L+ +++ S +G +I I + S I VR
Sbjct: 75 KRQSHLDRVEHPAAILSDSMSALQAIRSPSNRSGR--RIIRAILQVASRNDARGIPVRLQ 132
Query: 363 WVRGHAGIAGNEAVDRLAKET 383
WV H GN+ DRLAKE
Sbjct: 133 WVPRHCNDPGNDEADRLAKEA 153
>gi|331242414|ref|XP_003333853.1| hypothetical protein PGTG_15276 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 313
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYP-----IPVQDVRAVTDMQHEIQWR 413
+R W GH GI NE D LAK+ A G D + +P + D + +
Sbjct: 116 IRLFWCPGHEGIEANEKADSLAKKAAGGEDGSSDISFLSTNVPNSLAKLRQDCKTRLTTP 175
Query: 414 ENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRK--FIVTFNRLRSNHAICQAYLHKIN 471
E + +++ + +F K+ F +A+ ++ T +LR++ A +L +I
Sbjct: 176 ETLSEEDSRRFVFAKD-------SAKFVQALDTQEKGLAATILQLRADTAPLNNFLFRIK 228
Query: 472 IAPTNLCQECLEREDMAHIILCCPKYQ 498
C C E+ AH ++ C +Y+
Sbjct: 229 AILDPRCTNCFVLENAAHFLMFCSRYR 255
>gi|392596897|gb|EIW86219.1| hypothetical protein CONPUDRAFT_29773, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 97
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 291 TIFTAEAFAILQA---LKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD-IF 346
T++ AE ++L A LK + ++ + DS++ + K S + P H ++D +
Sbjct: 1 TVYEAELVSMLLAAHLLKRELARRQGRAFLGVDSQAAIRATKGCSPT---PGHYLVDAVT 57
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG 386
+A LQ+ VR W GH GI GNE D LAK A G
Sbjct: 58 EAFEDLQDRGHHVRVRWTPGHVGIDGNERADELAKAAAEG 97
>gi|342875223|gb|EGU77035.1| hypothetical protein FOXB_12456 [Fusarium oxysporum Fo5176]
Length = 757
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
TAE AI L + I+ ++I+T ++S + + N + +G H I +I+ A+ L+
Sbjct: 553 TAELAAIAHGLGCLPEIRYRVIVILTSNRSAAQPIGNPRQQSGQ-GH-IREIYDAVEKLR 610
Query: 354 EWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV---------RAVT 404
V IW+ ++ + + + AK +AR A PY P + R
Sbjct: 611 GNGNRVNIIWLSSNSELN----IQKTAKMSAR--HATEPYITPQKGAAKAKTTILSRTRA 664
Query: 405 DMQHEIQWRENV--MSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAI 462
D++ E + E V S+ + L K+ + D+ W ++ +LR+ A
Sbjct: 665 DLRSERKLPEGVGRHSRKVDSALPGKHTCLLYDQLSWKEASV--------LAQLRTGMAR 716
Query: 463 CQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
YL++I APT+ C +E + H + C K+
Sbjct: 717 LNGYLYQIRAAPTDECPCRRAKETVEHFLFRCVKW 751
>gi|294889539|ref|XP_002772858.1| hypothetical protein Pmar_PMAR013374 [Perkinsus marinus ATCC 50983]
gi|239877418|gb|EER04674.1| hypothetical protein Pmar_PMAR013374 [Perkinsus marinus ATCC 50983]
Length = 389
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 31/117 (26%)
Query: 282 GTFKLKNFATIFTAEAFAILQALK-YVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
G +L + A I AEA AIL+A+K + + + ++I +DS++ L+ L +
Sbjct: 254 GRVRLPHSAKIAQAEALAILEAMKKAIETGGYSAILIASDSQAVLKSLLSRR-------- 305
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPV 397
RFIWVRGHAG+ GN D +A+ G+ P +P+
Sbjct: 306 -------------------RFIWVRGHAGLTGNSIADGMARS---GSIVGTPRTVPI 340
>gi|425780653|gb|EKV18659.1| hypothetical protein PDIG_09730 [Penicillium digitatum PHI26]
Length = 501
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 32/261 (12%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITD 320
G VS+++ + +Q + GT + +T++ AE I AL + EVII +D
Sbjct: 180 GASMVSLQQGV---SSQRRYLGT---DSQSTVYAAELSGIEMALAKAKKEQAREVIIFSD 233
Query: 321 SKSCLEKLKNTSKSNGNPSHLILDIFKAL------SHLQEWNISVRFIWVRGHAGIAGNE 374
S++ ++ ++N + +G +++ I+ L + +Q+ V W+ H G++GNE
Sbjct: 234 SQAAIQAVQNPKRPSGQ--YILTRIYDHLRAIRSRNQVQQEPTIVTIRWIPAHVGVSGNE 291
Query: 375 AVDRLAK-----------ETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNK 423
D AK T G + RAV E +W S +
Sbjct: 292 YADTEAKGAALLGAGIGTTTGSGDPGRPTIRLAAAAKRAVRQRVRE-RWERETTSAPTKR 350
Query: 424 GLFYKNLFTITDKKPWFAKAIPLRKFI-----VTFNRLRSNHAICQAYLHKINIAPTNLC 478
+ N + + P K + L + + ++R+ + +L KI A T+ C
Sbjct: 351 LVQVPNXSQESMQAP-NKKTLRLYEGLSKPQCAILIQMRTMRIGLRHFLFKIKAAETDRC 409
Query: 479 QECLEREDMAHIILCCPKYQV 499
+ HI++ CP+Y +
Sbjct: 410 LCDEGSQTPKHILMQCPRYTI 430
>gi|212547169|ref|XP_002153737.1| reverse transcriptase, putative [Talaromyces marneffei ATCC 18224]
gi|210064393|gb|EEA18490.1| reverse transcriptase, putative [Talaromyces marneffei ATCC 18224]
Length = 1703
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 97/226 (42%), Gaps = 23/226 (10%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH 340
S T +++ ++ E AI AL+ + K + ++T +K+ L+N + +G H
Sbjct: 1436 SATLGIRSEQNPYSGELAAIAHALRTLPVTKSYRITLLTSNKAAALTLRNPRQQSGQ-EH 1494
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR---GTDALNPYPIP- 396
+ L I+K + L++ + +WV + + + RLAKE AR DA IP
Sbjct: 1495 VCL-IYKVIRKLRKNGNQIAILWV----PTSEDNKLLRLAKEQARIATHEDATPQAQIPR 1549
Query: 397 -----VQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIV 451
+ R+ + + + + + L K+ + D+ W ++
Sbjct: 1550 MKSTTLNIARSQQGISEGLPEKVGKHVKRVDAALPGKHTRQLYDRLSWKEASV------- 1602
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+LR+ A YL++IN+A T+ C RE + H + C K+
Sbjct: 1603 -LAQLRTGMARLNGYLYRINVAQTDQCPCGQARETVEHFLFRCQKW 1647
>gi|425781333|gb|EKV19307.1| hypothetical protein PDIG_03370 [Penicillium digitatum PHI26]
Length = 648
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 290 ATIFTAEAFAILQALKYV-----------SSIKENEVIIITDSKSCLEKLKNTSKSNGNP 338
AT++ AE AI AL+ + + E +I TD+++ L+ +KN +G
Sbjct: 313 ATVYAAELHAIEMALEVIQYQFTSNDDWRERLAERGAVIFTDNQAALKAIKNPKMPSGQV 372
Query: 339 SHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
+ + L + I V W+ H GI GNE VD LAK A TD N
Sbjct: 373 --YLEGSLRLLDWCSKSKIQVELRWIPAHEGIPGNEHVDMLAKSAATTTDTSN 423
>gi|443727119|gb|ELU14007.1| hypothetical protein CAPTEDRAFT_217934 [Capitella teleta]
Length = 664
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYV--SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH- 340
+L + A+IF+AE AI Q L + S+ + + +I TDS S L+ + N N H
Sbjct: 244 IRLPDSASIFSAELLAIYQVLTLLECSTNDQQQFLIATDSLSSLQAI-----GNFNIKHP 298
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
+ I + + L + I + W H G+ GNE D LAKE
Sbjct: 299 YVFKILEKCTLLHKKGIDLVMAWCPSHVGVMGNERADLLAKE 340
>gi|427779129|gb|JAA55016.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 652
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 11/171 (6%)
Query: 247 QALKYASSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKY 306
QA+ Y + G C +I + + SG + + + + E +I+ AL+
Sbjct: 377 QAVAYTDASFVAPRGSCGYAIYHP-QLSAPETHTSGPYL--HPPNVLSLEVISIVHALES 433
Query: 307 VSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVR 365
SS+ E I +S + + ++N + P L ++ +A+S LQ + +R WV
Sbjct: 434 FSSLASVPEYTIXXNSYAAIRHIQNRTL----PHSLEQEVERAVSALQPSTVFLR--WVP 487
Query: 366 GHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENV 416
GH+GI GNE RLA++ + P+P P +D + I R +
Sbjct: 488 GHSGIDGNELAHRLARDILHRAPFI-PWPTPSEDSGSSVKHDGTISLRHTI 537
>gi|427783055|gb|JAA56979.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 485
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 10/187 (5%)
Query: 317 IITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAV 376
I +DSK+ L+ + + + G L+ +I L E V F W+ H G+ GNE
Sbjct: 253 IFSDSKAALQSMLSALR-RGPYEQLVFEIRGLLHASHEKGHHVTFQWLPSHCGVIGNEHA 311
Query: 377 DRLAKETARGTDALNPYPIPVQDV-RAVTDMQHEIQ---WRENVMSQNNNKGLFYKNLFT 432
D A+ T + P+ D ++ + EI W N N + + T
Sbjct: 312 DNAARAALEDTTQEDTIPLSRSDAASSLRGLAQEITLSLWCPPSTQTNRNNRQHHLSFLT 371
Query: 433 ITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIIL 492
+ + R+ + + RL A ++Y +I +A + LC C E + HI+
Sbjct: 372 ----HLYMPSGLRRREATLLY-RLWLGVAFTKSYSFRIGMADSALCDVCRCEETLRHILC 426
Query: 493 CCPKYQV 499
CP Y V
Sbjct: 427 DCPVYNV 433
>gi|443694523|gb|ELT95634.1| hypothetical protein CAPTEDRAFT_227708 [Capitella teleta]
Length = 364
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 291 TIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+++TAE AI + L ++ + +E +I TDS S + + + + + I + +
Sbjct: 2 SVYTAELIAINETLTSIALLPYDEFVICTDSLSSILAISSIDLIHP----YVQSILQKCT 57
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEI 410
L + + FIW H GI GNE D LAK+ A G + LN PIP D + +T +
Sbjct: 58 CLAGRDKRIIFIWCPSHVGIPGNETADTLAKQ-ALGMNILN-CPIPHTDFKPITRSFVKT 115
Query: 411 QWRENVMSQNNNK 423
QW+ + NK
Sbjct: 116 QWQSEWDQETGNK 128
>gi|390603085|gb|EIN12477.1| RnaseH-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 403
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 344 DIFKALS-HLQEWNISVRFIWVRGHAGIAGNEAVDRLA-----KETARGTDALNPYPIPV 397
D+FKA + HL+ + F+WV+GH+G GNE D LA K++A D P +
Sbjct: 70 DLFKATAFHLRRRSAPTDFLWVKGHSGEEGNEKADALARDGVLKQSADDIDLNVPAEFNL 129
Query: 398 QDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLF---------------TITDKKPWFAK 442
+ R ++ M + +R +MS+ L ++D+ W +
Sbjct: 130 RGARLMS-MSQSLLYR-GIMSKQGPMDTRRAALAPLDMARHAIADLSGSVLSDEAIWLST 187
Query: 443 A-----IPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
P+R+F+ F L ++H I + + + C C E E M HI++ C +
Sbjct: 188 RRKDLRTPIRQFL--FRALHNSHRIGGFWRNVPGYSEREKCAYCGEEESMEHIMIDCERS 245
Query: 498 QVTLAIALVGSGQDARLVNGGRGFDP 523
T LV +DA GRG P
Sbjct: 246 YSTTVWNLV---RDA--WPEGRGILP 266
>gi|156540059|ref|XP_001599613.1| PREDICTED: hypothetical protein LOC100114674, partial [Nasonia
vitripennis]
Length = 721
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 276 TQNKNSGTF-KLKNFATIFTAEAFAILQ-ALKYVSSIKENEVIII-TDSKSCLEKLKNTS 332
+Q GTF L +AT+F E AIL A + + + +I I +DS++ L L
Sbjct: 208 SQRDGWGTFFSLGRYATVFQTEINAILTCAQRNIELGARDRIITICSDSQAALRALM--- 264
Query: 333 KSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP 392
++ S L+ + ++ L N VR + V GH GI GNE DRLA A+ ++ P
Sbjct: 265 -AHRTTSRLVWECKVVVNQLTAHNNKVRLLCVPGHTGIRGNEIADRLAALGAK-HPSIGP 322
Query: 393 YPIPVQDVRAVTDMQHEIQWR--------ENVMSQNNNKG 424
P +H +W+ + VM QN N G
Sbjct: 323 EP-----YTGAARCKHTKEWQGTQGCRQAKAVMGQNTNVG 357
>gi|342868408|gb|EGU72737.1| hypothetical protein FOXB_16754 [Fusarium oxysporum Fo5176]
Length = 349
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 265 VSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSC 324
V+I + I +T + GT + N ++TAE AI + L+Y+ +K ++I+T ++S
Sbjct: 171 VTIARAGKIIETFSVTLGTTEEHN---LYTAELVAIARGLRYLPEMKYRVIVILTSNRSA 227
Query: 325 LEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
+ + N + +G I +I+ A+ L+ VR IW+ AG G + + AK +A
Sbjct: 228 AQAISNPRQQSGQGQ--IREIYDAIEKLKGDGNRVRLIWL--PAG--GELKIQKTAKMSA 281
Query: 385 RGTDALNPYPIP 396
R A PY P
Sbjct: 282 R--QATEPYVTP 291
>gi|452842422|gb|EME44358.1| hypothetical protein DOTSEDRAFT_72005 [Dothistroma septosporum
NZE10]
Length = 298
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKE-----NEV 315
G V+ R+ +W + L F AE A+L+ +K +I + +V
Sbjct: 120 GGAGVAWRDKIW-------HGRAIALGRVKDSFAAEMHAVLEGIKAAHAIVDRRSEFTKV 172
Query: 316 IIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEA 375
++ TD +SCL +L + G L+ +I + L+ + V WV+GH+ GN+
Sbjct: 173 VVQTDCESCLIELARARAAGGGHYGLLDEIIHQEALLKSRGLDVVVWWVKGHSDSVGNDI 232
Query: 376 VDRLAK 381
D LA+
Sbjct: 233 ADSLAR 238
>gi|427783069|gb|JAA56986.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 481
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 13/194 (6%)
Query: 317 IITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAV 376
+ +DSK+ L+ L + + +G L+ ++ L E V+F W+ H G+ GNE
Sbjct: 253 VFSDSKAALQSLLSALR-HGPYEQLVFEVRYLLHTSIEKGHHVKFQWLPSHCGVIGNEHA 311
Query: 377 DRLAKETARGTDALNPYPIPVQD-VRAVTDMQHEIQWRE-NVMSQNNNKGLFYKNLFTIT 434
D A+ +G D L P+ D R + + +I + N S+ N+ N T+
Sbjct: 312 DNAARSALQG-DTLETIPLSRTDAARQLRVVAQKITFSTWNTASRLRNQHHHCPN--TLR 368
Query: 435 DKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
+ P + R RL A +++ +I +A C+ C E + HI C
Sbjct: 369 LQTPTGLR----RNDATLLCRLWLRVAFTKSFSFRIEMADNPFCEHCGSEETLRHIFCDC 424
Query: 495 PKY---QVTLAIAL 505
P+Y + +LA AL
Sbjct: 425 PRYNEQRTSLAAAL 438
>gi|443734745|gb|ELU18611.1| hypothetical protein CAPTEDRAFT_216906 [Capitella teleta]
Length = 252
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYV--SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSH- 340
+L + A+IF+AE AI Q L + S+ + + +I TDS S L+ + N N H
Sbjct: 144 IRLPDSASIFSAELLAIYQVLTLLECSANDQQQFLIATDSLSSLQAI-----GNFNIKHP 198
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
+ I + + L + I + W H G+ GNE D LAKE T
Sbjct: 199 YVFKILEKCTLLHKKGIYLVMAWCPSHVGVMGNERADLLAKEALSFT 245
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 181 PEYAKQNCFLNEVKDKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTA 240
P Y +N F N + DK+P+ +IFTDGSK+ +VA + T + +L + A+IF+A
Sbjct: 99 PNYTLRNEFYN-LMDKYPDHKVIFTDGSKSDSAVACS--ATADNLRIQIRLPDSASIFSA 155
Query: 241 EAFAILQAL 249
E AI Q L
Sbjct: 156 ELLAIYQVL 164
>gi|156037374|ref|XP_001586414.1| hypothetical protein SS1G_12398 [Sclerotinia sclerotiorum 1980]
gi|154697809|gb|EDN97547.1| hypothetical protein SS1G_12398 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 678
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAG 372
N+ I +D+++ L +LK S G + KA +Q + WV GH + G
Sbjct: 429 NKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAAEAIQNKGAEISLNWVPGHTSVQG 486
Query: 373 NEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFT 432
NE D LAKE + + + + A M + EN ++ N F++ T
Sbjct: 487 NELADSLAKEATKIPSSSH------ETSYASIGMDIKRMKSENWIAILNTHN-FHQPSST 539
Query: 433 ITDKKPW-FAKAIPL-----RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLERED 486
+ PW + I + R I +L+ H ++YL + I+ + C+ C +E
Sbjct: 540 YSRNYPWKISSKIRVLGNIKRSTICALFQLKIGHGYFKSYLKRFGISSNDNCR-CGGKES 598
Query: 487 MAHIILCCPKYQV 499
H++L CP Y++
Sbjct: 599 PDHLLLSCPLYKM 611
>gi|326480183|gb|EGE04193.1| hypothetical protein TEQG_03224 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 50.4 bits (119), Expect = 0.003, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 11/156 (7%)
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR-----GTDALNPYPIPVQ 398
+ + L L+ V+F W+ H G+ GNE D+LAKE A G D P
Sbjct: 7 EAIRELDELRRLGWEVQFRWIPAHVGVPGNEEADQLAKEAASVALNLGIDTGQPPESDQL 66
Query: 399 DVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRS 458
+ T W + N+ + LF NL K R ++R+
Sbjct: 67 RILMATTKTTITSWE----TANHGRDLF--NLGARPGKGILGTHRGTHRAISSAITQMRT 120
Query: 459 NHAICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
AYLH IN A T+ CQ + + H++L C
Sbjct: 121 GKIGLNAYLHTINKADTDKCQCGYGPQTVRHVLLEC 156
>gi|443723447|gb|ELU11866.1| hypothetical protein CAPTEDRAFT_187673 [Capitella teleta]
Length = 225
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 278 NKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNG 336
N+ KL ++FT+E AIL ALK V E ++ +I +D+ S + + +
Sbjct: 96 NRLRLKMKLPVQMSVFTSELIAILSALKCVEVDNEQHQFVICSDALSAIMAIHGMDVRHP 155
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+L + A+ + + V F+W H GI GNE D LAKE T+
Sbjct: 156 ----YVLKVLYAIKSIYQQEKIVVFMWCPPHVGIPGNEMADTLAKEALSSTN 203
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 195 DKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTAEAFAILQALK 250
D++P++ L +TDGSK+ +SVA +F+ N+ KL ++FT+E AIL ALK
Sbjct: 70 DRYPDSTLFYTDGSKSEDSVACSFF--SNRLRLKMKLPVQMSVFTSELIAILSALK 123
>gi|393233568|gb|EJD41138.1| hypothetical protein AURDEDRAFT_40523, partial [Auricularia
delicata TFB-10046 SS5]
Length = 102
Score = 50.4 bits (119), Expect = 0.003, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 291 TIFTAEAFAILQALKYVSSIKEN-EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
T+F E F IL AL+ V+ I+ +VII D++S + ++ S +G + I AL
Sbjct: 8 TVFEGELFGILLALRLVADIRGILDVIICLDNQSAIIRVHEPSPKSGQI--ITTAIHAAL 65
Query: 350 SHLQEWNISVRF--IWVRGHAGIAGNEAVDRLAKETA 384
+ L + R +WV GH G+ GNE D AK+ A
Sbjct: 66 ARLSKARPGFRLQLVWVPGHEGVDGNELADLHAKDAA 102
>gi|212541120|ref|XP_002150715.1| reverse transcriptase, putative [Talaromyces marneffei ATCC 18224]
gi|210068014|gb|EEA22106.1| reverse transcriptase, putative [Talaromyces marneffei ATCC 18224]
Length = 992
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 31/206 (15%)
Query: 292 IFTAEAFAILQALKY-VSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F E + AL++ + + ++ D+++ +++L++T G L L A S
Sbjct: 732 VFDVELMGVASALEWALERHLPGPIHVLLDAQNAIKRLQSTEPGAGQ--SLALRARMAAS 789
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L+ V WV GH G+ GNE D+ AK A + + V RA T+ +
Sbjct: 790 RLRLSGRPVTIQWVPGHNGVEGNEQADQAAKRAASKPAGPGFEGLSLAYVRRACTEARRA 849
Query: 410 IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHK 469
EN +A A ++ + +L++ HA YLH+
Sbjct: 850 AV--EN------------------------WAPAKAPKRVASRYYQLKTGHAPIGTYLHR 883
Query: 470 INIAPTNLCQECLE-REDMAHIILCC 494
I + C+ C E RE ++HI+ C
Sbjct: 884 IKTRDSPECRACGELRETVSHILFEC 909
>gi|2290213|gb|AAB65093.1| Lian-Aa1 retrotransposon protein [Aedes aegypti]
Length = 1189
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 26/226 (11%)
Query: 284 FKLKNFATIFTAEAFAILQALKYV--SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
+ L T+F AE FA++ ++ + + +DS++ ++ L S + S L
Sbjct: 941 YSLGRNCTVFQAEIFALMCGVQSALQQRVMGKVIYFCSDSQAAIKALA----SANSRSKL 996
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYP-IPVQ-- 398
++ + L N SV +WV GH+ IAGNE D LA++ A D + P P IP+
Sbjct: 997 VIACRTQIEELNSVN-SVNLVWVPGHSSIAGNELADELARDGA-SHDFIGPEPAIPISKC 1054
Query: 399 ----DVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP--LRKFIVT 452
+ + QH+ W N + L+ IT+ P AK + ++
Sbjct: 1055 WVKLQINSWAATQHKQYW--NSLESCRQTKLY------ITEPSPRVAKYLTNLSKQNCSL 1106
Query: 453 FNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC-CPKY 497
R + H ++ I A + +C C ++ ++C CP +
Sbjct: 1107 LVRALTGHCRLNYHMANIQRADSFVCDSCDSDYGTSYHLICNCPVF 1152
>gi|255930537|ref|XP_002556828.1| Pc06g02260 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581441|emb|CAP79219.1| Pc06g02260 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 291
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 89/216 (41%), Gaps = 27/216 (12%)
Query: 293 FTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHL 352
F+AE A+ AL V +K+ + ++T +K+ ++N + +G + ++K + L
Sbjct: 36 FSAELAAMAHALNMVVGVKDYRITLVTSNKAAALTIRNPRQQSGQ--EFVSQLYKLMRKL 93
Query: 353 QEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQW 412
+ + W+ + + + LAKE AR A +P + V + I
Sbjct: 94 RRNGNHINVRWI----STSEDNKLRGLAKEQARA--ATQEDAVPQKQVPRMKSTTLNIAR 147
Query: 413 RENVMS-----------QNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+ V S + + L K+ + D+ W ++ +LR+ A
Sbjct: 148 SQAVPSNDLPANIGKHAKRVDAALPGKHTRQLYDRLSWKEASV--------LAQLRTGMA 199
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
YL++IN+A T+ C RE M H + C K+
Sbjct: 200 RLNGYLYRINVADTDQCACGQARETMEHFLFRCQKW 235
>gi|242807454|ref|XP_002484959.1| ribonuclease H, putative [Talaromyces stipitatus ATCC 10500]
gi|218715584|gb|EED15006.1| ribonuclease H, putative [Talaromyces stipitatus ATCC 10500]
Length = 419
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSK---------SNGNP---SHLI 342
AE AI++AL+ + V I+TDS+ ++ + N + S+G P LI
Sbjct: 286 AELTAIIRALEIAP--RHRPVTIVTDSRYAIDCVTNWFRKWVRNNWQTSDGKPVENKDLI 343
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I +S ++ F WV+GH AGNEA DRLA + AR
Sbjct: 344 QSILVKISERDSLKVTTTFEWVKGHNRDAGNEAADRLAVDGAR 386
>gi|427791927|gb|JAA61415.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1045
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 310 IKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAG 369
I V +++DSKS L+ L N ++ G L+ ++AL+ SV F W+ H G
Sbjct: 828 IPVQPVAVLSDSKSALQTLANPRRA-GLTGSLLAAKYQALA---ASGASVSFHWLPSHVG 883
Query: 370 IAGNEAVDRLAKETAR-GTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLF-- 426
IAGNE D LAK + GT PY RAV + +Q K L
Sbjct: 884 IAGNEEADTLAKAAHQPGT----PY------TRAVAARDY---------TQARLKRLLLT 924
Query: 427 -YKNLFTITDKKPWFAKAIPL-RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLER 484
+ + + P L R+ RLR+ A H + + C C +
Sbjct: 925 VHPDSRVANGRGPKLLPETGLSRRDRAALLRLRTGCVWTAARRHAKGLCASPACSRCGDP 984
Query: 485 EDMAHIILCCP 495
E + H++ CP
Sbjct: 985 ETLEHLLCACP 995
>gi|294889789|ref|XP_002772958.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239877569|gb|EER04774.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 382
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVS--SIKENEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
FKL+ FATI E AI +AL+++S + + E ++ TDS++ + ++ + +
Sbjct: 225 FKLERFATIHQCELEAIRRALRWLSYSAHRGIEWLLFTDSQASIRTIRGREATERSA--- 281
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
I + ++HL ++ V+ W GH G+ NEAVD+LA
Sbjct: 282 ---IARDIAHLSL-HVKVQLNWCPGHEGVQWNEAVDQLA 316
>gi|255951480|ref|XP_002566507.1| Pc22g26400 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593524|emb|CAP99928.1| Pc22g26400 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 168
Score = 50.1 bits (118), Expect = 0.004, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 317 IITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAV 376
I+ DSK+ L+ ++N +G +I I +A + +Q I++R W+ GH GN+A
Sbjct: 94 ILCDSKTALQAIENPGNKSGQ--RIIHAILQAAAKVQANGIALRLQWIPGHCDDPGNDAA 151
Query: 377 DRLAKETA 384
DRLAK+ A
Sbjct: 152 DRLAKDAA 159
>gi|156041116|ref|XP_001587544.1| hypothetical protein SS1G_11537 [Sclerotinia sclerotiorum 1980]
gi|154695920|gb|EDN95658.1| hypothetical protein SS1G_11537 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 401
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S S G + KA
Sbjct: 215 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDSPGQSCQI--KAIKAA 272
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+Q + WV GH + GNE D LAKE +
Sbjct: 273 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATK 308
>gi|342318905|gb|EGU10861.1| Pol-like protein [Rhodotorula glutinis ATCC 204091]
Length = 2277
Score = 50.1 bits (118), Expect = 0.004, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 291 TIFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKA 348
T++ E IL ALK V + + V++ D+ S L + + + G +L L I KA
Sbjct: 1946 TVYAGELQGILLALKAVQQTADAPSHVLLSVDNTSALTHSTDPAPTPGQ--YLRLAIRKA 2003
Query: 349 LSHLQEWNIS-VRFIWVRGHAGIAGNEAVDRLAKETARGTDA 389
L L+ +S + W+ GH G+ GNE D AKE R ++
Sbjct: 2004 LEELERTCVSTIHLSWLPGHVGVVGNEVADLAAKEAVRAMES 2045
>gi|242824212|ref|XP_002488213.1| hypothetical protein TSTA_005890 [Talaromyces stipitatus ATCC
10500]
gi|218713134|gb|EED12559.1| hypothetical protein TSTA_005890 [Talaromyces stipitatus ATCC
10500]
Length = 874
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++L++T G L+L KA
Sbjct: 523 VFDAELVGVATALEWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQ--ALVLRAHKAAE 580
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV GH+GI GNE D+ AK A A + + V RA T+ +
Sbjct: 581 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAASKQTAPGFEHLSLAHVRRACTEARRA 640
Query: 410 I--QWRE-NVMSQNNNKGLFYK-----NLFTITDKKP 438
+W + N + + G YK NL + K P
Sbjct: 641 AVSEWAQINAVQGRHRDGRVYKMPRGWNLDPVAGKAP 677
>gi|156042792|ref|XP_001587953.1| hypothetical protein SS1G_11195 [Sclerotinia sclerotiorum 1980]
gi|154695580|gb|EDN95318.1| hypothetical protein SS1G_11195 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 396
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S S G + KA
Sbjct: 215 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDSPGQSCQI--KAIKAA 272
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+Q + WV GH + GNE D LAKE +
Sbjct: 273 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATK 308
>gi|154269790|ref|XP_001535810.1| hypothetical protein HCAG_09260 [Ajellomyces capsulatus NAm1]
gi|150409831|gb|EDN05270.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 279
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK G+F L + +F AEAF +AL K V + E+ ++ + D+ S +
Sbjct: 5 NKQLGSFSAALSPMSHVFDAEAFGACRALECAVKVVPCVTEDSSNPQIWLCLDNTSVIWG 64
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 65 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 117
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 118 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 176
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 177 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 230
>gi|443720278|gb|ELU10076.1| hypothetical protein CAPTEDRAFT_219461 [Capitella teleta]
Length = 498
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
K ++ +++TAE AI + L ++ + +E +I TD S + L +S +P +
Sbjct: 108 KSEDAMSVYTAELIAINETLTSIALLPYDEFVICTDFLSSI--LAISSIDLIHP--YVQS 163
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVT 404
I + + L + + FIW H GI GNE D +AK+ A G + LN + IP D + +T
Sbjct: 164 ILQKCTCLAGRDKRIIFIWCPSHVGIPGNETADTVAKQ-ALGMNILNCH-IPHTDFKPIT 221
Query: 405 DMQHEIQWRENVMSQNNNK 423
+ QW+ + NK
Sbjct: 222 CSFVKTQWQSEWDQETGNK 240
>gi|400593545|gb|EJP61480.1| reverse transcriptase [Beauveria bassiana ARSEF 2860]
Length = 171
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 288 NFATIFTAEAFAILQALKYVSSIKEN-----EVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
+ +T++TAE ++ AL+ V ++ + I TD+++ L+ L+N +G +++
Sbjct: 43 DVSTVYTAELRGLVLALQLVLNVHKTGDNPGRCAIFTDNQAALQALQNPKCPSGQ--YIL 100
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGN 373
++ +AL L+ +S++F W+ H G+ GN
Sbjct: 101 IEAVQALDELRRLKLSIQFRWIPAHVGVPGN 131
>gi|425783431|gb|EKV21281.1| hypothetical protein PDIP_08070 [Penicillium digitatum Pd1]
Length = 268
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 290 ATIFTAEAFAILQALKYV-----------SSIKENEVIIITDSKSCLEKLKNTSKSNGNP 338
AT++ AE AI AL+ + + E +I TD+++ L+ ++N +G
Sbjct: 102 ATVYAAELRAIEMALEVIQYQFTSNDDWRERLAERGAVIFTDNQAALKAIQNPKMPSGQV 161
Query: 339 SHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
+ + L + I V W+ H GI GNE VD LAK A TD N
Sbjct: 162 --YLEGSLRLLDWCSKSKIQVELRWIPAHEGIPGNEHVDMLAKSAATTTDTSN 212
>gi|197122207|ref|YP_002134158.1| ribonuclease H [Anaeromyxobacter sp. K]
gi|238689906|sp|B4UMK8.1|RNH_ANASK RecName: Full=Ribonuclease H; Short=RNase H
gi|196172056|gb|ACG73029.1| ribonuclease H [Anaeromyxobacter sp. K]
Length = 183
Score = 49.7 bits (117), Expect = 0.006, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLEKL---------KNTSKSNGNPSHLILDIF 346
E A+L+AL+ + ++ EVI +DS+ ++ L K ++G P L D+
Sbjct: 57 ELRAVLEALEGLPGGEQVEVI--SDSRYVVDALSRWIHGWRKKGWRTASGEPV-LNRDLI 113
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG 386
+AL + +SVR+ WVRGH G A NE VD+LA+ ARG
Sbjct: 114 EALD-ARASALSVRYTWVRGHDGHAVNEVVDQLAQAAARG 152
>gi|343428557|emb|CBQ72087.1| related to Reverse transcriptase [Sporisorium reilianum SRZ2]
Length = 2266
Score = 49.7 bits (117), Expect = 0.006, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 292 IFTAEAFAILQALKYVSSIKENE---------VIIITDSKSCLEKLKNTSKSNGNPSHLI 342
IF AE AI L+ + + + I TDS S L++L +
Sbjct: 1981 IFEAELSAITAGLRACLPDAKGDAPPPSSLPPIYIFTDSASSLQRLNCPWSQDRRAGQRR 2040
Query: 343 LDIFKALSH--LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA----RGTDAL-NPYPI 395
I + + H L+ SV F+WV GH G+AGNE DRLA+ A + TDA N P+
Sbjct: 2041 CAIIRTIVHTLLRLGCPSVHFVWVPGHVGVAGNELADRLARRGAALQNQATDATANLGPV 2100
Query: 396 PVQDVRAVTDMQHEIQWRE 414
+ +R + + +W +
Sbjct: 2101 RAR-IREASQALRQTRWNK 2118
>gi|425774046|gb|EKV12369.1| Reverse transcriptase, putative [Penicillium digitatum PHI26]
Length = 1225
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 290 ATIFTAEAFAILQALKYVSS-----------IKENEVIIITDSKSCLEKLKNTSKSNGNP 338
AT++ AE AI AL+ + + ++ V+I TD+++ L ++N +G
Sbjct: 1013 ATVYAAELRAIEMALEVIKERFNDDNEWRDCLAKSGVVIFTDNQATLRAIQNPRMPSGQ- 1071
Query: 339 SHLILDIFKALSHLQEW---NISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ L EW I V WV H GI GNEA D AKE A T+
Sbjct: 1072 -----VYLEGCLRLLEWCNDKIQVELRWVPAHEGIPGNEAADMYAKEAATTTE 1119
>gi|425773855|gb|EKV12180.1| hypothetical protein PDIG_45050 [Penicillium digitatum PHI26]
gi|425780488|gb|EKV18494.1| hypothetical protein PDIG_08080 [Penicillium digitatum PHI26]
gi|425781625|gb|EKV19579.1| hypothetical protein PDIG_02180 [Penicillium digitatum PHI26]
Length = 1381
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 290 ATIFTAEAFAILQALKYVSS-----------IKENEVIIITDSKSCLEKLKNTSKSNGNP 338
AT++ AE AI AL+ + + ++ V+I TD+++ L ++N +G
Sbjct: 1013 ATVYAAELRAIEMALEVIKERFNDDNEWRDCLAKSGVVIFTDNQATLRAIQNPRMPSGQ- 1071
Query: 339 SHLILDIFKALSHLQEW---NISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ L EW I V WV H GI GNEA D AKE A T+
Sbjct: 1072 -----VYLEGCLRLLEWCNDKIQVELRWVPAHEGIPGNEAADMYAKEAATTTE 1119
>gi|425779742|gb|EKV17778.1| hypothetical protein PDIG_13540 [Penicillium digitatum PHI26]
Length = 699
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIIITDSKSCLEKLKNTSKSNGN 337
++G + + + +F AEA + L+ ++ +++ + DS S + ++ GN
Sbjct: 439 DTGAGAINSRSHVFDAEAIGAWRGLERAIAVAPPRSKIWLCIDSTSVIWCIR------GN 492
Query: 338 PSHLILDIFKALSH-LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIP 396
S+ F A +++ NIS+R W GH GI GNEA D LA E A A+ P
Sbjct: 493 ASNSSQWAFLACHRAMEQHNISLR--WAPGHTGIEGNEAADTLAGEGALRGSAIGMEAEP 550
Query: 397 -VQDVRAV-TDMQHE--IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP-LRKFIV 451
+ +R++ ++++E ++W + V + + + + + I D P P L +++
Sbjct: 551 TISGIRSIFRELRNEARLRWWDTVSQKLSQWYRRWSDTYEI-DSLPELELRRPALHRWLA 609
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
LRS+H Y K N L C R+ H+ LC
Sbjct: 610 ----LRSSHGDFDWYHRKFNHEDAKLDCSCGRRKSPEHLALC 647
>gi|425775771|gb|EKV14023.1| hypothetical protein PDIG_35060 [Penicillium digitatum PHI26]
Length = 648
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIIITDSKSCLEKLKNTSKSNGN 337
++G + + + +F AEA + L+ ++ +++ + DS S + ++ GN
Sbjct: 388 DTGAGAINSRSHVFDAEAIGAWRGLERAIAVAPPRSKIWLCIDSTSVIWCIR------GN 441
Query: 338 PSHLILDIFKALSH-LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIP 396
S+ F A +++ NIS+R W GH GI GNEA D LA E A A+ P
Sbjct: 442 ASNSSQWAFLACHRAMEQHNISLR--WAPGHTGIEGNEAADTLAGEGALRGSAIGMEAEP 499
Query: 397 -VQDVRAV-TDMQHE--IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP-LRKFIV 451
+ +R++ ++++E ++W + V + + + + + I D P P L +++
Sbjct: 500 TISGIRSIFRELRNEARLRWWDTVSQKLSQWYRRWSDTYEI-DSLPELELRRPALHRWLA 558
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
LRS+H Y K N L C R+ H+ LC
Sbjct: 559 ----LRSSHGDFDWYHRKFNHEDAKLDCSCGRRKSPEHLALC 596
>gi|156039247|ref|XP_001586731.1| hypothetical protein SS1G_11760 [Sclerotinia sclerotiorum 1980]
gi|154697497|gb|EDN97235.1| hypothetical protein SS1G_11760 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 374
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 89/234 (38%), Gaps = 43/234 (18%)
Query: 283 TFKLKNFATIFTAEAFAIL----QALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNP 338
+F L A +F AEA A + +AL S ++ I D+ +L S NG+
Sbjct: 109 SFSLGTNAEVFDAEAMAAVTGAAKALALPSIKLATDLWIFLDNYEVALRL--GSHFNGSS 166
Query: 339 SHLILDIFKA---------LSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDA 389
+ D K LSH+ I R WV GH I GNE D+ AKE A+
Sbjct: 167 QAVFEDFLKLKQAWAARPRLSHIPPGKI--RIHWVPGHLNIPGNEMADKAAKEGAK---- 220
Query: 390 LNPYPIPV-------QDVRAVTDMQHEIQWRENVMSQNNNKGLFYK---NLFTITDKKPW 439
L P P P + +R+ T+ W N +S K L YK N T++ K
Sbjct: 221 LPPPPNPACTLASLKRLIRSKTNKADNQLW--NTVSPQYYKDLQYKHTSNTITLSLK--- 275
Query: 440 FAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
R + RS H AY + N + C +R+ H C
Sbjct: 276 -------RATLHYILAARSQHGDFAAYHERFNHTTAHTLCSCGKRKTPLHFFFC 322
>gi|427780533|gb|JAA55718.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 380
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 283 TFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
T+KL + +T +E A+ A+ ++ N + DSK+ L+ L + + G+ L+
Sbjct: 193 TYKLCHVSTSTGSELAALRGAVNHIKEQPANRWAVFCDSKAALQCLSSALR-RGSYEQLV 251
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD-VR 401
+I + L ++ E V F W+ H GI+GN+ D A+E A G +L P+ D R
Sbjct: 252 WEIREMLHNVTEQGHDVVFQWLPSHCGISGNDLADEAARE-AHGETSLVSIPLSRIDAAR 310
Query: 402 AVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
++ + + + SQ ++ L+ + P + R+ RLR A
Sbjct: 311 YLSKLAQNMTLQMWRTSQFTDQRLYSLDPSLRLRLLPGLS-----REEDTVLCRLRLGVA 365
Query: 462 ICQAYLHKINIA 473
AY KI +A
Sbjct: 366 FTNAYSFKIEMA 377
>gi|117925405|ref|YP_866022.1| RNase HI [Magnetococcus marinus MC-1]
gi|117609161|gb|ABK44616.1| RNase HI [Magnetococcus marinus MC-1]
Length = 238
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 288 NFATIFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLE---------KLKNTSKSNGN 337
+A T +L A+ + + E + V IITDS + K++ KS+GN
Sbjct: 120 GWAPQTTNNRMEMLAAIHALEPLPEGSRVKIITDSAYVKDGITKWIHGWKVRGWKKSDGN 179
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
+ L +D++K L ++ N V + W++GHAG AGNE DRLA+
Sbjct: 180 -TVLNVDLWKRLDAARQ-NRDVTWQWIKGHAGHAGNEQADRLAR 221
>gi|425775212|gb|EKV13494.1| hypothetical protein PDIG_38760 [Penicillium digitatum PHI26]
Length = 470
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 290 ATIFTAEAFAILQALKYVSS-----------IKENEVIIITDSKSCLEKLKNTSKSNGNP 338
AT++ AE AI AL+ + + ++ V+I TD+++ L ++N +G
Sbjct: 102 ATVYAAELRAIEMALEVIKERFNDDNEWRDCLAKSGVVIFTDNQATLRAIQNPRMPSGQV 161
Query: 339 SHLILDIFKALSHLQEW---NISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ L EW I V WV H GI GNEA D AKE A T+
Sbjct: 162 ------YLEGCLRLLEWCNDKIQVELRWVPAHEGIPGNEAADMYAKEAATTTE 208
>gi|392568106|gb|EIW61280.1| ribonuclease H-like protein [Trametes versicolor FP-101664 SS1]
Length = 417
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 270 SLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK 329
+W + +N+G N + AE +A+ L ++ + + I++DSK +E L
Sbjct: 9 GVWFGEQDPRNTGVRVPHNEQSNQAAEMYAV--TLAHMLTPPFAPLHIVSDSKYVVEGLT 66
Query: 330 N---TSKSNGNPSHLILDIFK-ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ G ++ K A++HL+ + F WV+GHA GNE DRLA+E A
Sbjct: 67 QHLPKWERRGWIGVANAEVIKEAVAHLRTRSAPTTFRWVKGHANERGNEEADRLAREGAN 126
Query: 386 GTDALNPYPIP 396
L P +P
Sbjct: 127 LPQQLRPVALP 137
>gi|294872399|ref|XP_002766265.1| hypothetical protein Pmar_PMAR023144 [Perkinsus marinus ATCC 50983]
gi|239866995|gb|EEQ98982.1| hypothetical protein Pmar_PMAR023144 [Perkinsus marinus ATCC 50983]
Length = 331
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 253 SSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYV--SSI 310
S +K+++ G V R+ + + +S +KL +ATI E +L+A+++V ++
Sbjct: 113 SVVKDRKTGAGMVVYRKGVEV------HSNYWKLSPYATITDCELLGLLEAVRWVILTTE 166
Query: 311 KENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGI 370
+E E + TDS++ L+ L + S + + L E V F WV GH+G+
Sbjct: 167 REEEWAVFTDSQAVLKILSSRSTVARRDKARQITLL-----LAEIPDKVTFHWVPGHSGM 221
Query: 371 AGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
N+ D LA + A + I V+ +R
Sbjct: 222 FANDRADELAAKGASMMEVSAETEISVKTLR 252
>gi|425779685|gb|EKV17723.1| putative RNA-directed DNA polymerase from transposon X-element
[Penicillium digitatum PHI26]
Length = 1267
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIIITDSKSCLEKLKNTSKSNGN 337
++G + + + +F AEA + L+ ++ +++ + DS S + ++ GN
Sbjct: 1007 DTGAGAINSRSHVFDAEAIGAWRGLERAIAVAPPRSKIWLCIDSTSVIWCIR------GN 1060
Query: 338 PSHLILDIFKALSH-LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIP 396
S+ F A +++ NIS+R W GH GI GNEA D LA E A A+ P
Sbjct: 1061 ASNSSQWAFLACHRAMEQHNISLR--WAPGHTGIEGNEAADTLAGEGALRGSAIGMEAEP 1118
Query: 397 -VQDVRAV-TDMQHE--IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP-LRKFIV 451
+ +R++ ++++E ++W + V + + + + + I D P P L +++
Sbjct: 1119 TISGIRSIFRELRNEARLRWWDTVSQKLSQWYRRWSDTYEI-DSLPELELRRPALHRWLA 1177
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
LRS+H Y K N L C R+ H+ LC
Sbjct: 1178 ----LRSSHGDFDWYHRKFNHEDAKLDCSCGRRKSPEHLALC 1215
>gi|425778793|gb|EKV16898.1| hypothetical protein PDIG_18140 [Penicillium digitatum PHI26]
Length = 1766
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIIITDSKSCLEKLKNTSKSNGN 337
++G + + + +F AEA + L+ ++ +++ + DS S + ++ GN
Sbjct: 1506 DTGAGAINSRSHVFDAEAIGAWRGLERAIAVAPPRSKIWLCIDSTSVIWCIR------GN 1559
Query: 338 PSHLILDIFKALSH-LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIP 396
S+ F A +++ NIS+R W GH GI GNEA D LA E A A+ P
Sbjct: 1560 ASNSSQWAFLACHRAMEQHNISLR--WAPGHTGIEGNEAADTLAGEGALRGSAIGMEAEP 1617
Query: 397 -VQDVRAV-TDMQHE--IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP-LRKFIV 451
+ +R++ ++++E ++W + V + + + + + I D P P L +++
Sbjct: 1618 TISGIRSIFRELRNEARLRWWDTVSQKLSQWYRRWSDTYEI-DSLPELELRRPALHRWLA 1676
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
LRS+H Y K N L C R+ H+ LC
Sbjct: 1677 ----LRSSHGDFDWYHRKFNHEDAKLDCSCGRRKSPEHLALC 1714
>gi|327282768|ref|XP_003226114.1| PREDICTED: ribonuclease H1-like isoform 2 [Anolis carolinensis]
Length = 300
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKN---TSKSNGNPSHL 341
+L T AE A +A++ S ++ I TDSK + + + KSNG +
Sbjct: 191 RLPGRQTNQRAEIHAACKAIEQAKSQNIKKLAIYTDSKFTINGMTSWVPNWKSNGWKTCA 250
Query: 342 ILDI-----FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
D+ F+ LS L E + ++++ V GHAG GNEA DRLAKE A
Sbjct: 251 GKDVTNKEDFEKLSKLSE-GMDIQWMHVPGHAGFTGNEAADRLAKEGA 297
>gi|425774883|gb|EKV13176.1| hypothetical protein PDIG_39510 [Penicillium digitatum PHI26]
Length = 1756
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIIITDSKSCLEKLKNTSKSNGN 337
++G + + + +F AEA + L+ ++ +++ + DS S + ++ GN
Sbjct: 1496 DTGAGAINSRSHVFDAEAIGAWRGLERAIAVAPPRSKIWLCIDSTSVIWCIR------GN 1549
Query: 338 PSHLILDIFKALSH-LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIP 396
S+ F A +++ NIS+R W GH GI GNEA D LA E A A+ P
Sbjct: 1550 ASNSSQWAFLACHRAMEQHNISLR--WAPGHTGIEGNEAADTLAGEGALRGSAIGMEAEP 1607
Query: 397 -VQDVRAV-TDMQHE--IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP-LRKFIV 451
+ +R++ ++++E ++W + V + + + + + I D P P L +++
Sbjct: 1608 TISGIRSIFRELRNEARLRWWDTVSQKLSQWYRRWSDTYEI-DSLPELELRRPALHRWLA 1666
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
LRS+H Y K N L C R+ H+ LC
Sbjct: 1667 ----LRSSHGDFDWYHRKFNHEDAKLDCSCGRRKSPEHLALC 1704
>gi|418297192|ref|ZP_12909034.1| putative ribonuclease HI [Agrobacterium tumefaciens CCNWGS0286]
gi|355538290|gb|EHH07537.1| putative ribonuclease HI [Agrobacterium tumefaciens CCNWGS0286]
Length = 229
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 19/113 (16%)
Query: 290 ATIFTAEAFAILQALKYVSSI---KENEVIIITDSKSC---LEKLKNTSKSNG---NPS- 339
AT E F +L A++ S+ + V I +DSK C + ++ K NG +P+
Sbjct: 94 ATNNVMELFGLLSAIEKAKSLVGESGDPVTIWSDSKYCTTGVSDWRHKWKRNGWRKSPAA 153
Query: 340 -------HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
L I +ALS+ ++ IS+R WV+GH+GI GNE D+LA+E R
Sbjct: 154 TEHVKNVDLWRAIDEALSNAGDFGISIR--WVKGHSGIVGNERADQLAEEGRR 204
>gi|400593780|gb|EJP61690.1| reverse transcriptase [Beauveria bassiana ARSEF 2860]
Length = 591
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNE 374
V I+T +K+ ++ LKN + +G I I+ ++ QE +S+ W ++
Sbjct: 358 VSILTRNKAAVQSLKNPHQQSGQ--EFIRCIYDSIQDQQENGVSISITW----KPTESDD 411
Query: 375 AVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQN--NNKGLFYKNLFT 432
+ +AK A+ DA P Q + I+ R+ ++ N G + K++ T
Sbjct: 412 ELLNVAKRKAK--DATREGARPEQRFPKMLSTTFNIEKRKLRAERHIPENVGKYSKSIDT 469
Query: 433 ---------ITDKKPWFAKAI--PLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQEC 481
+ + PW + + LR +++ N YLH+I P++ C
Sbjct: 470 ALPGEYTRALYEDLPWNERTVLAQLRTYMIRLN----------GYLHQIRAVPSSQCACE 519
Query: 482 LEREDMAHIILCCPKYQ 498
LERE + H + CPK++
Sbjct: 520 LERETIKHFLFRCPKWE 536
>gi|327282766|ref|XP_003226113.1| PREDICTED: ribonuclease H1-like isoform 1 [Anolis carolinensis]
Length = 323
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKN---TSKSNGNPSHL 341
+L T AE A +A++ S ++ I TDSK + + + KSNG +
Sbjct: 214 RLPGRQTNQRAEIHAACKAIEQAKSQNIKKLAIYTDSKFTINGMTSWVPNWKSNGWKTCA 273
Query: 342 ILDI-----FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
D+ F+ LS L E + ++++ V GHAG GNEA DRLAKE A
Sbjct: 274 GKDVTNKEDFEKLSKLSE-GMDIQWMHVPGHAGFTGNEAADRLAKEGA 320
>gi|156064993|ref|XP_001598418.1| hypothetical protein SS1G_00507 [Sclerotinia sclerotiorum 1980]
gi|154691366|gb|EDN91104.1| hypothetical protein SS1G_00507 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1477
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIII 318
G V+I+ + I + N GT +L ++ E F + +A++Y SSI + I
Sbjct: 1324 GVGIVAIQSNNRILYQERSNIGTNQL-----VYNGELFGVTRAIEYASSIAYTGQKFKIY 1378
Query: 319 TDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDR 378
+D+++ L +LK S G + + KA ++ + WV GH + GNE D+
Sbjct: 1379 SDNQAGLYRLKTPSDHPGQANQI--RAIKAAEVIRAKGAEISLNWVPGHTSVEGNELADK 1436
Query: 379 LAKE 382
LAKE
Sbjct: 1437 LAKE 1440
>gi|425775217|gb|EKV13499.1| hypothetical protein PDIG_38810 [Penicillium digitatum PHI26]
Length = 1766
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIIITDSKSCLEKLKNTSKSNGN 337
++G + + + +F AEA + L+ ++ +++ + DS S + ++ GN
Sbjct: 1506 DTGAGAINSRSHVFDAEAIGAWRGLERAIAVAPPRSKIWLCIDSTSVIWCIR------GN 1559
Query: 338 PSHLILDIFKALSH-LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIP 396
S+ F A +++ NIS+R W GH GI GNEA D LA E A A+ P
Sbjct: 1560 ASNSSQWAFLACHRAMEQHNISLR--WAPGHTGIEGNEAADTLAGEGALRGSAIGMEAEP 1617
Query: 397 -VQDVRAV-TDMQHE--IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP-LRKFIV 451
+ +R++ ++++E ++W + V + + + + + I D P P L +++
Sbjct: 1618 TISGIRSIFRELRNEARLRWWDTVSQKLSQWYRRWSDTYEI-DSLPELELRRPALHRWLA 1676
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
LRS+H Y K N L C R+ H+ LC
Sbjct: 1677 ----LRSSHGDFDWYHRKFNHEDAKLDCSCGRRKSPEHLALC 1714
>gi|425773357|gb|EKV11713.1| hypothetical protein PDIG_48450 [Penicillium digitatum PHI26]
Length = 1136
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIIITDSKSCLEKLKNTSKSNGN 337
++G + + + +F AEA + L+ ++ +++ + DS S + ++ GN
Sbjct: 876 DTGAGAINSRSHVFDAEAIGAWRGLERAIAVAPPRSKIWLCIDSTSVIWCIR------GN 929
Query: 338 PSHLILDIFKALSH-LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIP 396
S+ F A +++ NIS+R W GH GI GNEA D LA E A A+ P
Sbjct: 930 ASNSSQWAFLACHRAMEQHNISLR--WAPGHTGIEGNEAADTLAGEGALRGSAIGMEAEP 987
Query: 397 -VQDVRAV-TDMQHE--IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP-LRKFIV 451
+ +R++ ++++E ++W + V + + + + + I D P P L +++
Sbjct: 988 TISGIRSIFRELRNEARLRWWDTVSQKLSQWYRRWSDTYEI-DSLPELELRRPALHRWLA 1046
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
LRS+H Y K N L C R+ H+ LC
Sbjct: 1047 ----LRSSHGDFDWYHRKFNHEDAKLDCSCGRRKSPEHLALC 1084
>gi|209526760|ref|ZP_03275282.1| Ribonuclease H [Arthrospira maxima CS-328]
gi|376007851|ref|ZP_09785036.1| Ribonuclease H (RNase HI, degrades RNA of DNA-RNA hybrids
[Arthrospira sp. PCC 8005]
gi|423062962|ref|ZP_17051752.1| ribonuclease H [Arthrospira platensis C1]
gi|209492804|gb|EDZ93137.1| Ribonuclease H [Arthrospira maxima CS-328]
gi|375323827|emb|CCE20789.1| Ribonuclease H (RNase HI, degrades RNA of DNA-RNA hybrids
[Arthrospira sp. PCC 8005]
gi|406715541|gb|EKD10695.1| ribonuclease H [Arthrospira platensis C1]
Length = 169
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL---------KNT 331
SG F+L + A A L+ALK+ S V + +DSK ++ + KN
Sbjct: 39 SGGFRLTTNNRMEMMAAIAALRALKFPCS-----VTLYSDSKYLVDAMTLGWAKRWQKNG 93
Query: 332 SKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
+ N D++ L L E VRF+WV+GHAG NE DRLA E A D+L
Sbjct: 94 WRRNQKEWAKNPDLWAQLLGLCE-EHQVRFVWVKGHAGDRENEICDRLAVE-ATHRDSLP 151
Query: 392 P-----YPIPVQDVRAVT 404
P P QD+ +++
Sbjct: 152 PDAGYENPPQPQDIDSMS 169
>gi|414154901|ref|ZP_11411218.1| Ribonuclease H [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453732|emb|CCO09122.1| Ribonuclease H [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 154
Score = 48.5 bits (114), Expect = 0.010, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 294 TAEAFAILQALKYVSSIKEN-EVIIITDSKSCLEKLK---------NTSKSNGNPSHLIL 343
T IL A+ + +KE V + TDS+ + ++ N N L
Sbjct: 45 TNNRMEILAAIVGLEQLKERCSVTLYTDSQYLVNAIEQGWAKKWRANGWMRNKKEPALNA 104
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
D+++ L L E++ V+F+WVRGHAG NE DRLA E AR D
Sbjct: 105 DLWERLLKLLEYH-QVKFVWVRGHAGNPENERCDRLAVEAARQPD 148
>gi|427779423|gb|JAA55163.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 435
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 37/217 (17%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
FK + T AE A+ AL +++ + + I +DSK+ L+ L + + G L+
Sbjct: 199 FKTSHLTTSTAAELAALRVALDFITDERAQKWAIFSDSKAALQSLLSPLR-RGLHEQLVF 257
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKET-ARGTDALNPYPIPVQDVRA 402
+I + L E + F W+ H GI GNE ++ A+ + L IP+ A
Sbjct: 258 EITEETHRLIEKGHQITFQWLPSHCGIIGNERANQAARSAHTESSQTL----IPLSRTDA 313
Query: 403 VTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP--LRKFIVTFNRLRSNH 460
++ + R+ +SQ N L+++ P + IP LR+
Sbjct: 314 AWKIR--VLARQCTVSQWNEPHFKNARLYSL---DPTLSLRIPPGLRR------------ 356
Query: 461 AICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
A T C C E + HI+ CP+Y
Sbjct: 357 ------------ADTAACDHCSGDETIQHILCECPQY 381
>gi|154486791|ref|ZP_02028198.1| hypothetical protein BIFADO_00617 [Bifidobacterium adolescentis
L2-32]
gi|154084654|gb|EDN83699.1| ribonuclease HI [Bifidobacterium adolescentis L2-32]
Length = 427
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Query: 299 AILQALKYVSSIKENEVIIITDSK---SCLEKL---------KNTSKSNGNPSHLILDIF 346
A+L+AL+ + +++I TDS+ +C K KN+ K + LI I
Sbjct: 41 AVLEALR--AHPGSEDLVIETDSQYAINCSTKWVQGWKRNGWKNSQKKPVKNADLIRAID 98
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
++H SVRF+WV+GHAG AGNE VD LA+
Sbjct: 99 NEIAHRA---GSVRFVWVKGHAGNAGNEKVDELAR 130
>gi|119025380|ref|YP_909225.1| ribonuclease H [Bifidobacterium adolescentis ATCC 15703]
gi|118764964|dbj|BAF39143.1| ribonuclease H [Bifidobacterium adolescentis ATCC 15703]
Length = 445
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Query: 299 AILQALKYVSSIKENEVIIITDSK---SCLEKL---------KNTSKSNGNPSHLILDIF 346
A+L+AL+ + +++I TDS+ +C K KN+ K + LI I
Sbjct: 59 AVLEALR--AHPGSEDLVIETDSQYAINCSTKWVQGWKRNGWKNSQKKPVKNADLIRAID 116
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
++H SVRF+WV+GHAG AGNE VD LA+
Sbjct: 117 NEIAHRAG---SVRFVWVKGHAGNAGNEKVDELAR 148
>gi|321461849|gb|EFX72877.1| hypothetical protein DAPPUDRAFT_325814 [Daphnia pulex]
Length = 308
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
+ L ++IFTAE AI QALK + + E II +DS S + + + S S
Sbjct: 167 WTLTKGSSIFTAEVTAIYQALKLFYDMDDCPPEAIIYSDSSSAITAISSNSLSEN---EA 223
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
I I + ++ L+ R W+ H GI GNE DRLA
Sbjct: 224 ITAIREIIASLKSSGTRTRLTWIPSHTGIEGNERADRLA 262
>gi|321461852|gb|EFX72880.1| hypothetical protein DAPPUDRAFT_325810 [Daphnia pulex]
Length = 268
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 239 TAEAFAILQALKYASSIKEKEAGYCKVSIRESLW--IFDTQNKNSGTFKLKNFATIFTAE 296
T F L + A+SI+ G K S +E+ IF + L ++IFTAE
Sbjct: 78 TTSLFNTLDSSAPATSIRAYTDG-SKSSSQETTTCAIFIPALNKEHAWTLTKGSSIFTAE 136
Query: 297 AFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AI QALK + + E II +DS S + + + S S I I + ++ L+
Sbjct: 137 VTAIYQALKLFYDMDDCPPEAIIYSDSSSAITAISSNSLSEN---EAITAIREIIASLKS 193
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLA 380
R W+ H GI GNE DRLA
Sbjct: 194 SGTRTRLTWIPSHTGIEGNERTDRLA 219
>gi|427779397|gb|JAA55150.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 425
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
FK + T AE A+ AL +++ + + I +DSK+ L+ L + + G L+
Sbjct: 199 FKTSHLTTSTAAELAALRVALDFITDERAQKWAIFSDSKAALQSLLSPLR-RGLHEQLVF 257
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
+I + L E + F W+ H GI GNE D+ A+
Sbjct: 258 EITEETHRLIEKGHQITFQWLTSHCGIIGNERADQAAR 295
>gi|409993735|ref|ZP_11276866.1| ribonuclease H [Arthrospira platensis str. Paraca]
gi|291567761|dbj|BAI90033.1| ribonuclease H [Arthrospira platensis NIES-39]
gi|409935395|gb|EKN76928.1| ribonuclease H [Arthrospira platensis str. Paraca]
Length = 169
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL---------KNT 331
SG F+L + A A LQALK+ V + +DSK ++ + KN
Sbjct: 39 SGGFRLTTNNRMEMMGAIAALQALKFPCC-----VTLYSDSKYLVDAMTQGWAKRWQKNG 93
Query: 332 SKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
+ + D++ L L E VRF+WV+GHAG NE DRLA E G D L
Sbjct: 94 WRRSQKEWAKNPDLWAQLLALCE-EHQVRFVWVKGHAGDRENEICDRLAVEATHG-DNLP 151
Query: 392 P------YPIPVQDVRAVT 404
P P+P QD+ +++
Sbjct: 152 PDLGYENPPLP-QDIDSMS 169
>gi|342869519|gb|EGU73183.1| hypothetical protein FOXB_16307 [Fusarium oxysporum Fo5176]
Length = 609
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 73/162 (45%), Gaps = 23/162 (14%)
Query: 231 LQNFATIFTAEAFA-------ILQALKYA-SSIKEKE-AGYCKVSIRESLWIFDTQNKNS 281
LQ + TAEAF L + Y+ S+ EK A Y ++ L IFD
Sbjct: 369 LQTASKEKTAEAFLRWVKSLDPLTLVVYSDGSLSEKGVASYGFTIHQDDLPIFD------ 422
Query: 282 GTFKLKNFATIFTAEAFAILQALKYVSSIKENEV--IIITDSKSCLEKLKNTSKSNGNPS 339
G+ +L A +F AEA L+ LK +++E+ I I CL+ L + G PS
Sbjct: 423 GSDRLGP-AEVFDAEATGALEGLKAALNLRESATQNIFI-----CLDNLAAATCLQGTPS 476
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
IF L + +V+ WV GH I GNE D+LAK
Sbjct: 477 DSSQHIFLEFQALVTSHGAVQVRWVPGHTDIPGNEQADKLAK 518
>gi|220916983|ref|YP_002492287.1| ribonuclease H [Anaeromyxobacter dehalogenans 2CP-1]
gi|254808022|sp|B8J731.1|RNH_ANAD2 RecName: Full=Ribonuclease H; Short=RNase H
gi|219954837|gb|ACL65221.1| ribonuclease H [Anaeromyxobacter dehalogenans 2CP-1]
Length = 183
Score = 48.5 bits (114), Expect = 0.012, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLEKL---------KNTSKSNGNPSHLILDIF 346
E A+L+AL+ + ++ EVI +DS+ ++ L K ++G P L D+
Sbjct: 57 ELRAVLEALEGLPGGEQVEVI--SDSRYVVDALSRWIHGWRKKGWRTASGEPV-LNRDLI 113
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG 386
+AL + ++VR+ WVRGH G A NE VD+LA+ ARG
Sbjct: 114 EALD-ARASALTVRYTWVRGHDGHAVNEVVDQLAQAAARG 152
>gi|294952773|ref|XP_002787453.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239902433|gb|EER19249.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 905
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 48 ILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVKVI 107
I+P EQ+G + GC L LD + T ++ ++AW+DL +AYD W+ +
Sbjct: 376 IMPREQQGSRSQSMGCLHQLWLDSLTTHHIRQARHRCAIAWLDLERAYDGLLPTWVDYWL 435
Query: 108 QMYKI 112
M+K+
Sbjct: 436 TMFKL 440
>gi|321464309|gb|EFX75318.1| hypothetical protein DAPPUDRAFT_108042 [Daphnia pulex]
Length = 440
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNP 338
S ++ L N A+IF+AE A+ AL + E EV+I DS S ++ + +T NP
Sbjct: 120 SQSWSLSNQASIFSAELLAVDLALDLTYKLNEYPQEVMIFCDSSSAIKTIAST-----NP 174
Query: 339 SHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK---ETARGTDALNPYPI 395
GI GNE DRLA GT + P P+
Sbjct: 175 ------------------------------GIEGNEEADRLAHYECTNPSGTKSGLP-PL 203
Query: 396 PVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNR 455
P++ + + W+EN++ + T T WF R + +R
Sbjct: 204 PIRIIGLL-----RADWKENLLGDLKKCQKTCIQVMTKTGLTDWFPHKD--RATTICLHR 256
Query: 456 LRSNHAICQAYLHKINIAPTNLCQE-CLEREDMAHIILCCP 495
LRS H ++ H+I+ C++ C E++ HI++ CP
Sbjct: 257 LRSGHNHLNSFNHRIDKKADPSCRKGCEAMENVKHILIDCP 297
>gi|427779393|gb|JAA55148.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 424
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 283 TFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
T+KL + +T +E A+ A+ ++ N + DSK+ L+ L + + G+ L+
Sbjct: 193 TYKLCHVSTSTGSELAALRGAVNHIKEQPANRWAVFCDSKAALQCLSSALR-RGSYEQLV 251
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPI 395
+I + L ++ E V F W+ H GI+GN+ D A+E A G +L P+
Sbjct: 252 WEIREMLHNVTEQGHDVVFQWLPSHCGISGNDLADEAARE-AHGETSLVSIPL 303
>gi|242775815|ref|XP_002478715.1| hypothetical protein TSTA_089910 [Talaromyces stipitatus ATCC 10500]
gi|218722334|gb|EED21752.1| hypothetical protein TSTA_089910 [Talaromyces stipitatus ATCC 10500]
Length = 1141
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + ++ D+++ +++L++T G L+L +A
Sbjct: 998 VFDAELVGVATALEWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQ--ALVLRAHRAAE 1055
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
L V WV GH+GI GNE D+ AK A
Sbjct: 1056 KLALRGQPVTIQWVPGHSGIEGNEQADQAAKRAA 1089
>gi|156044334|ref|XP_001588723.1| hypothetical protein SS1G_10270 [Sclerotinia sclerotiorum 1980]
gi|154694659|gb|EDN94397.1| hypothetical protein SS1G_10270 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 789
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 93/238 (39%), Gaps = 34/238 (14%)
Query: 274 FDTQNKNSGTFKLKNFATIFTAEAFAIL----QALKYVSSIKENEVIIITDSKSCLEKLK 329
FD Q + +F L A +F AEA A + +AL S+ ++ I D+ +L
Sbjct: 516 FDIQIAHH-SFSLGTNAEVFDAEATAAVAGTAKALTLASTKLATDLWIFLDNHEAALRLG 574
Query: 330 NTSKSNGNPSHLILDIFKA---------LSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
S NG+ + D K L H I VR WV GH I GNE D+ A
Sbjct: 575 --SHFNGSSQRVFEDFLKLTQAWAVRPRLPHTSPGKIRVR--WVPGHLDIPGNEIADKAA 630
Query: 381 KETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQ---NNNKGLFYKNL-FTITDK 436
KE + P P+ + + ++ I+ R N + N +YK+L F T
Sbjct: 631 KEGTK-------LPFPLNPICTLASLKRMIRTRANKADEQLWNIVSPQYYKDLQFNHTSN 683
Query: 437 KPWFA-KAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
+ K L + +RS H AY + N ++ C +R+ H C
Sbjct: 684 TDTLSLKRATLHHILA----IRSQHGDFAAYHERFNHTTAHVHCSCGKRKTPLHFFFC 737
>gi|242775769|ref|XP_002478706.1| hypothetical protein TSTA_089820 [Talaromyces stipitatus ATCC
10500]
gi|218722325|gb|EED21743.1| hypothetical protein TSTA_089820 [Talaromyces stipitatus ATCC
10500]
Length = 317
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + + D+++ +++L++T + G L+L +A+
Sbjct: 197 VFDAELMGVATALEWALERQPLGPIWVFLDAQNAIDRLRSTRPAPGQ--ALVLRAHRAVE 254
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
L + V WV GH+G+ GNE D+ AK A
Sbjct: 255 KLAMRDQLVTIQWVPGHSGVVGNEQTDQAAKRAA 288
>gi|425778854|gb|EKV16957.1| hypothetical protein PDIG_17630 [Penicillium digitatum PHI26]
Length = 872
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIIITDSKSCLEKLKNTSKSNGN 337
++G + + + +F AEA + L+ ++ +++ + DS S + ++ GN
Sbjct: 612 DTGAGAINSRSHVFDAEAIGAWRGLERAIAVAPPRSKIWLCIDSTSVIWCIR------GN 665
Query: 338 PSHLILDIFKALSH-LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIP 396
S+ F A +++ NIS+R W GH GI GNEA D LA E A A+ P
Sbjct: 666 ASNSSQWAFLACHRAMEQHNISLR--WAPGHTGIEGNEAADTLAGEGALRGSAIGMEAEP 723
Query: 397 -VQDVRAV-TDMQHE--IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP-LRKFIV 451
+ +R++ ++++E ++W + V + + + + + I D P P L +++
Sbjct: 724 TISGIRSIFRELRNEARLRWWDTVSQKLSQWYRRWSDTYEI-DSLPELELRRPALHRWLA 782
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
LRS+H Y K N L C R+ H+ LC
Sbjct: 783 ----LRSSHGDFDWYHRKFNHEDAKLDCSCGRRKSPEHLALC 820
>gi|321456607|gb|EFX67710.1| hypothetical protein DAPPUDRAFT_261174 [Daphnia pulex]
Length = 268
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
+ L ++IFTAE AI QALK + + E II +DS S + + + S S
Sbjct: 124 WTLTKGSSIFTAEVTAIYQALKLFYDMDDCPPEAIIYSDSSSAITAISSNSLSEN---EA 180
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
I I + ++ L+ R W+ H GI GNE DRLA
Sbjct: 181 ITAIREIIASLKSSGTRTRLTWIPSHTGIEGNERTDRLA 219
>gi|242825397|ref|XP_002488432.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712250|gb|EED11676.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 733
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + I+ D+++ +++LK+ G L+L +A+
Sbjct: 521 VFDAELMGVATALEWALERQPLGPIWILLDAQNAIDRLKSARPGPGQA--LVLRAHRAVE 578
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHE- 409
L V WV GH+G+ GNE D+ AK A A + + D R ++
Sbjct: 579 KLAMRGQPVTIQWVPGHSGVVGNEQADQAAKRAASKQTAPGFEHLSLADGRVYKMLEAGT 638
Query: 410 -IQWREN 415
QWRE
Sbjct: 639 LTQWREK 645
>gi|425778657|gb|EKV16767.1| hypothetical protein PDIG_18910 [Penicillium digitatum PHI26]
Length = 1822
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIIITDSKSCLEKLKNTSKSNGN 337
++G + + + +F AEA + L+ ++ +++ + DS S + ++ GN
Sbjct: 1575 DTGAGAINSRSHVFDAEAIGAWRGLERAIAVAPPRSKIWLCIDSTSVIWCIR------GN 1628
Query: 338 PSHLILDIFKALSH-LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIP 396
S+ F A +++ NIS+R W GH GI GNEA D LA E A A+ P
Sbjct: 1629 ASNSSQWAFLACHRAMEQHNISLR--WAPGHTGIEGNEAADTLAGEGALRGSAIGMEAEP 1686
Query: 397 -VQDVRAV-TDMQHE--IQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP-LRKFIV 451
+ +R++ ++++E ++W + V + + + + + I D P P L +++
Sbjct: 1687 TISGIRSIFRELRNEARLRWWDTVSQKLSQWYRRWSDTYEI-DSLPELELRRPALHRWLA 1745
Query: 452 TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
LRS+H Y K N L C R+ H+ LC
Sbjct: 1746 ----LRSSHGDFDWYHRKFNHEDAKLDCSCGRRKSPEHLALC 1783
>gi|427779633|gb|JAA55268.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 534
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 135/329 (41%), Gaps = 36/329 (10%)
Query: 184 AKQNCFLNEVKDKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTAEAF 243
A Q L + +K I+TDGS +S S A A + + FK + + AE
Sbjct: 175 ALQQATLLFLHEKHSGRLHIYTDGSVSSASSAGAVVIPEKSVTIKFKTSHLTSSTAAELT 234
Query: 244 AILQALKYASSIKEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQA 303
AI AL++ +KE W + +K + + F + A ++
Sbjct: 235 AIRAALEFV--VKEPPQA----------WSIFSDSKAALQCIMSPFRRGPNEQLVADIRI 282
Query: 304 LKYVSSIKENEVI----------IITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
L + + K++ ++ I +DSK+ L+ + + + N L+ DI + L H
Sbjct: 283 LHHRAVEKQHNIVYQWIPGHXWSIFSDSKAALQCIMSPFRRGPN-EQLVADI-RILHHRA 340
Query: 354 -EWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQW 412
E ++ + W+ GH GI GN+ D A+ DAL+ IP+ A T ++
Sbjct: 341 VEKQHNIVYQWIPGHCGIYGNDRADEAARS---AHDALHCAAIPLSRTDAATRLRSLA-- 395
Query: 413 RENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP---LRKFIVTFNRLRSNHAICQAYLHK 469
RE ++Q ++ L + P +P R RL A AY +
Sbjct: 396 RELTLAQWHSTEFTNARLHNL---DPNLQLRLPSGITRAEETLLCRLWLGVAFTNAYSFR 452
Query: 470 INIAPTNLCQECLEREDMAHIILCCPKYQ 498
I +A + C C E +AH++ CP+++
Sbjct: 453 IGMASSPTCDNCSCEETIAHLLCECPRFK 481
>gi|426197432|gb|EKV47359.1| hypothetical protein AGABI2DRAFT_221381 [Agaricus bisporus var.
bisporus H97]
Length = 261
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 29/187 (15%)
Query: 333 KSNGNPSHLI----LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ G+ HLI D+ +A S + + W+ H+G+AGNE VD+ AKE A G
Sbjct: 6 RRGGSGQHLIEAYRRDLGRASS---SGTVKITVKWISAHSGVAGNEIVDQAAKEAADGMS 62
Query: 389 ALNPY-------PIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFA 441
+ + +P+ + E+++R+ N+ + + + + D +
Sbjct: 63 SQKKHLPAKLHAKLPLSKAAVKRTKKAEMEYRDAESWVNSPRFVRMQGV----DGDYPYK 118
Query: 442 KAIPLRKFIVTFN-----RLRSNHAICQAYLHKINIAPTNLCQECLER------EDMAHI 490
K R+++ ++RS H AYL + + C CL E + H
Sbjct: 119 KFRKWREYLTRAQGSALIQIRSGHIPINAYLKRFKKRDNDYCDNCLTNTNRILPETVNHY 178
Query: 491 ILCCPKY 497
IL CP Y
Sbjct: 179 ILDCPTY 185
>gi|342883519|gb|EGU83988.1| hypothetical protein FOXB_05501 [Fusarium oxysporum Fo5176]
Length = 362
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 290 ATIFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFK 347
A +F EA L+ LK ++++ + I I CL+ L + G PS D+F
Sbjct: 119 AEVFDVEATGALEGLKAALNLRDAATQNIFI-----CLDNLAAATCLRGTPSDSSQDVFL 173
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
L + +V+ +WV GH I GNE D+LA+
Sbjct: 174 EFQALATSHGAVQVLWVLGHTDIPGNELADKLAR 207
>gi|307210820|gb|EFN87190.1| hypothetical protein EAI_11614 [Harpegnathos saltator]
Length = 87
Score = 48.1 bits (113), Expect = 0.015, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 293 FTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHL 352
F E+ AIL+A V+S + + V I TDS S + L N+S G +I I A+ +
Sbjct: 1 FYVESMAILRAANIVASERPDRVSIFTDSFSTINAL-NSSDLEGESHRIIQRIKVAVWKI 59
Query: 353 QEWNISVRFIWVRGHAGIAGNEAVDRLA 380
I + +W+ H I GNE + LA
Sbjct: 60 SREGIYIILVWIPAHKNIPGNEMANTLA 87
>gi|357621762|gb|EHJ73487.1| non-LTR retrotransposon CATS [Danaus plexippus]
Length = 261
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 7/142 (4%)
Query: 358 SVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVM 417
S+ F WV+ H GI GNEA D K A+ A + + ++ T H W+
Sbjct: 112 SIEFAWVKAHVGIVGNEAADTAVKRAAKLHKAPDYTQFLITFIKHSTRSLHTSVWQSRYE 171
Query: 418 SQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNL 477
S+ + +++ TI K L T + + HA + YLH++ + +
Sbjct: 172 SEPQGQHT-KEHVPTIKH----IIKLHSLAHNTFTLTQTLTGHAYRKQYLHRVKVTEDAV 226
Query: 478 --CQECLEREDMAHIILCCPKY 497
C + + M H++ CP++
Sbjct: 227 CPCDGTMTVQSMGHVLEDCPRF 248
>gi|241567430|ref|XP_002402293.1| conserved hypothetical protein [Ixodes scapularis]
gi|215501983|gb|EEC11477.1| conserved hypothetical protein [Ixodes scapularis]
Length = 345
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 79/214 (36%), Gaps = 21/214 (9%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
+L A+ TAE AI L+ + ++++DS++ L L T + L
Sbjct: 98 RLTFHASSTTAELAAIETGLRELFPWPPGRAVVLSDSRTALRHLLRTDDAPP----LARS 153
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVT 404
+ L++ + F WV H GI GNE D+LA D P
Sbjct: 154 VVSLTLRLRDRGWEIAFQWVPSHCGIPGNEEADKLAGLVHDNPD------FPASTASRFN 207
Query: 405 DMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKP-WFAKAIPLRKFIVTFNRLRSNHAIC 463
D + ++ RE + + T + P ++ +P R +RLR++ A
Sbjct: 208 DARLLVRRRERAS---------HPDPATAAGRPPVRVSRRLP-RGHSALLHRLRTDSASS 257
Query: 464 QAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
L + C C + H+ L C +Y
Sbjct: 258 PLVLSVLQPDLYPACPNCGDEGSAGHLFLRCERY 291
>gi|324501119|gb|ADY40503.1| Retrovirus-related Pol polyprotein from type-1 retrotransposable
element R2 [Ascaris suum]
Length = 1353
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 49 LPMEQRGCLEGATGCKDLLMLDKIITEDC-KKKYKNLSVAWIDLLKAYDNCPHEWM 103
LPM QR + GC ++LD+ + D +K +LSVAW+D KAYD+ HE++
Sbjct: 647 LPMNQRAMRKREWGCTHAMVLDRAMVMDAMAQKKHSLSVAWLDYRKAYDSVSHEYI 702
>gi|443699889|gb|ELT99143.1| hypothetical protein CAPTEDRAFT_215477 [Capitella teleta]
Length = 347
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 285 KLKNFATIFTAEAFAILQALKYVS-SIKENEVIIITDSKSCLEKLKNTSKSNGNPSH-LI 342
+L + A+IF+AE AI + L + + +++I+TDS S L+ L N N +H +
Sbjct: 160 RLPDSASIFSAELLAIYEVLTLLECAASYEQILIVTDSLSSLQAL-----GNFNITHPYV 214
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRA 402
I + + L + +W H G+ GN D LAK+ T A N IP D ++
Sbjct: 215 FKILEKYTILYNRGFDLVMLWCPSHVGVVGNARADLLAKKALSFT-ACN-VRIPASDFKS 272
Query: 403 VT 404
V
Sbjct: 273 VA 274
>gi|71024129|ref|XP_762294.1| hypothetical protein UM06147.1 [Ustilago maydis 521]
gi|46101799|gb|EAK87032.1| hypothetical protein UM06147.1 [Ustilago maydis 521]
Length = 345
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
+T++ AE AI +AL++ I I D+++ + + ++ + +P +
Sbjct: 93 STVYRAELLAIRKALEH--GIANAGATIFCDNRAAV--IHIDARPSDDPD---------I 139
Query: 350 SHLQEWNISVRF--IWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTD-- 405
S +Q+ + R +W+ GH I GNE D LA+ A DA+ +P ++ AV
Sbjct: 140 SAIQQMSSGRRVTVVWIPGHRDIPGNERADTLAQGAA--DDAIG-FPADYREEAAVRHAL 196
Query: 406 MQHEIQ-WRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQ 464
++ +Q W + S L N + + + K +P R + ++R+ A
Sbjct: 197 LRRTMQAWTKAWESTPRGSELKAINTLRVGETVRLY-KHLP-RDQVSILAQIRTGPASTN 254
Query: 465 AYLHKINI-APTNLCQECLEREDMAHIILC----CPKYQVTLAIALVGS-GQDARLVN 516
+YL K + T C C RED H+++C P+ ++ ++ G ++ RLV+
Sbjct: 255 SYLKKRKVPGKTGKCDRCGSREDRLHLLVCRKLALPRRKLEESLRQAGHLARNQRLVS 312
>gi|407915231|gb|EKG08948.1| hypothetical protein MPH_14100 [Macrophomina phaseolina MS6]
Length = 375
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 21/192 (10%)
Query: 316 IIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISV-RFIWVRGHAGIAGNE 374
+I DSKS L+ L + +G ++ I + L +Q + V + WV HAG+ GNE
Sbjct: 127 VIYCDSKSALQSLLRPRQRSGQV--VLKQILETLDKMQRRKVPVVQLRWVPAHAGVPGNE 184
Query: 375 AVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQ--W-------RENVMSQNNNKGL 425
++LA + AL + ++ V A+ D++ I W +E +++ ++ L
Sbjct: 185 RANKLALQATEPDKALPDSGVRLKSV-ALADVKRAISRAWAKELDGIKEGRLARTLDRAL 243
Query: 426 FYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLERE 485
+ + DK A+ +LR++ + LHKI ++ C E
Sbjct: 244 SQNHTRKLYDKLNAAEAAV--------IAQLRTSRSRLNESLHKIRRVDSSRCACGRGEE 295
Query: 486 DMAHIILCCPKY 497
H +L C ++
Sbjct: 296 TAKHFLLECTRW 307
>gi|2146863|pir||S60004 hypothetical protein - common roundworm retrotransposon R4
(fragment)
gi|903661|gb|AAA97394.1| reverse transcriptase [Ascaris lumbricoides]
Length = 1381
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 49 LPMEQRGCLEGATGCKDLLMLDKIITEDC-KKKYKNLSVAWIDLLKAYDNCPHEWM 103
LPM QR + GC ++LD+ + D +K +LSVAW+D KAYD+ HE++
Sbjct: 675 LPMNQRAMRKREWGCTHAMVLDRAMVMDAMAQKKHSLSVAWLDYRKAYDSVSHEYI 730
>gi|427798049|gb|JAA64476.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 972
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 13/116 (11%)
Query: 268 RESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEK 327
R + IF + + S + +L ++ +F AE AI+ AL+ +S+ V IITDS S
Sbjct: 863 RSGIGIFCPKLEWSFSLRLPDYIPVFLAEFMAIILALRKLST-AVTVVAIITDSLSVCSS 921
Query: 328 LKNTSKSNGNPSHLILDIFKAL--SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
L S P IL +F L +HLQ + IWV GH G+ N+ LAK
Sbjct: 922 L---FASGVTP---ILKLFHVLVPAHLQ----CIHLIWVTGHKGLLLNKMTGSLAK 967
>gi|403411627|emb|CCL98327.1| predicted protein [Fibroporia radiculosa]
Length = 766
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 30/235 (12%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSIKENE---VIIITDSKSCLEKLKNTSKSNG 336
NSG F A IF AE A+ + + + +++ D+ L K+ N
Sbjct: 278 NSGKFGAGRCA-IFDAEMMALARGIHSALQGAPQDCTHLVLCVDNAGALSKILNCEM--- 333
Query: 337 NPSHL--ILDIFKALSHLQEWNIS-VRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPY 393
PS L IL K + LQ + +WV H + NE VD LAK
Sbjct: 334 GPSQLVSILAAEKVMEFLQRSERHHISLLWVPSHKDVPPNEFVDELAKSALESEQ----- 388
Query: 394 PIPVQDVRAVTD--MQHEIQWRENVMSQNNNKGLFYKNLFTITDKKP---WFAKAIPLRK 448
P V RA+ D + +I+W S +G +N++ + + P A+A PLR
Sbjct: 389 PEFVSQARAMADCLTRAKIKW-AKYYSSYKYRG---RNMWILKNHNPLSHMSARAYPLRY 444
Query: 449 F------IVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+ R+ SNH C +Y + +I C +D H + CP +
Sbjct: 445 LGKNNQGMAQAARVLSNHFPCGSYREEYHIPGPRNCPCSGTLDDRDHTLFDCPMW 499
>gi|427793319|gb|JAA62111.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 333
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 22/223 (9%)
Query: 283 TFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
+FK + + AE A+ AL ++ + I TDSK+ L+ L + + +G L+
Sbjct: 75 SFKTDHPISSTAAELAALRTALCVLNREQPQRWSIFTDSKAALQSLLSALR-HGPYEQLV 133
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR------GTDALNPYPIP 396
+I + E V F W+ H G+ GNE D A+ +DA + I
Sbjct: 134 FEIRHLIHTSSEKGHQVTFQWLPSHCGVIGNEHADNAARSALEEVIPLSRSDAASMLRII 193
Query: 397 VQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRL 456
+D+ T R Q++ L ++ T R+ + RL
Sbjct: 194 AKDISQPTLHTS----RSQNYRQHHLNALRRFHMPTGLH-----------RREVTLLCRL 238
Query: 457 RSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
A ++Y +I +A +C+ C E + HI CP+Y V
Sbjct: 239 WLRVAFTKSYSFRIGMADNAVCEACGTEETLQHIFCDCPRYAV 281
>gi|212539902|ref|XP_002150106.1| reverse transcriptase, putative [Talaromyces marneffei ATCC 18224]
gi|210067405|gb|EEA21497.1| reverse transcriptase, putative [Talaromyces marneffei ATCC 18224]
Length = 1318
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 40/229 (17%)
Query: 272 WIFDTQNKNSGTFKLKNFATI--------FTAEAFAILQALKYVSSIK-ENEVIIITDSK 322
+I DTQ N+GT + T+ +TAE AI AL+ +S + + I++ ++
Sbjct: 1105 YIRDTQADNNGTDISRYSITLGKRTEQNPYTAELEAIAVALERISPETCQRWISILSSNR 1164
Query: 323 SCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
S L + + +G + I I++ + LQ+ +V IW+ GHA I + R AK
Sbjct: 1165 SVLSAISQPRQQSGQLT--IRRIYRLIQVLQQRGNAVNAIWIPGHADI----DLQRQAKA 1218
Query: 383 TAR---GTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNK----------GLFYKN 429
AR GT+ L P P + ++ RE + + K G +N
Sbjct: 1219 EARKSTGTERL-PEKQPFHAKSTTIRLALAVRKREWTLPEEVGKYSKALDIALPGKHTRN 1277
Query: 430 LFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLC 478
L+ + RK T +LR+ +YL++I A +NLC
Sbjct: 1278 LYDGLN-----------RKEAKTLAQLRTGMTRLNSYLNRIGAAHSNLC 1315
>gi|242222489|ref|XP_002476962.1| predicted protein [Postia placenta Mad-698-R]
gi|220723717|gb|EED77834.1| predicted protein [Postia placenta Mad-698-R]
Length = 367
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP----YPIPVQDVRAVTDMQHEIQWRE 414
V +WV H I NE VD LAK D + P YP+ + VRA + +W +
Sbjct: 77 VLLLWVPAHKNIEPNEFVDELAKA---ALDGVQPDFVSYPMALARVRA----HMKSKW-D 128
Query: 415 NVMSQNNNKGLFYKNLFTITDKKPWF---AKAIPLRKFIVTFN-------RLRSNHAICQ 464
+V NN ++L+ D P AK+ L + T N R +NH C
Sbjct: 129 HVALDTNNTAYRGRHLWVAID-HPLHGATAKSTWLLRHAGTSNHNTARAARFLTNHFPCG 187
Query: 465 AYLHKINIAPTN--LCQECLEREDMAHIILCCPKYQVTLA 502
AY K NI+ + LC LE D HI+ CP + T A
Sbjct: 188 AYRAKFNISGPHDCLCGGGLETRD--HILFHCPYWIRTKA 225
>gi|342320065|gb|EGU12008.1| Pol-like protein [Rhodotorula glutinis ATCC 204091]
Length = 2002
Score = 47.4 bits (111), Expect = 0.028, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 259 EAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALK--YVSSIKEN--E 314
+ G +++ +E + I Q + G +L+ T++ E + AL V+ I +
Sbjct: 1631 DGGKVRLAEKEEVEIELWQRERKGMGQLQ---TVYAGELEGLRLALSSLLVTPIADTPLS 1687
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEW--NISVRFIWVRGHAGIAG 372
V+I D+ S L + + S+G HL L I KA HL+ ++ V W GH GI G
Sbjct: 1688 VLISLDNTSALTHSTDPTPSSGQ--HLRLAIRKAFEHLKRTRKDLVVSLSWSPGHVGIEG 1745
Query: 373 NEAVDRLAKETAR 385
NEA D KE R
Sbjct: 1746 NEAADVEVKEAVR 1758
>gi|242825355|ref|XP_002488423.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712241|gb|EED11667.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1181
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + I+ D+++ +++LK+ G L+L +A+
Sbjct: 909 VFDAELMGVATALEWALERQPLGPIWILLDAQNAIDRLKSARPGPGQA--LVLRAHRAVE 966
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
L V WV GH+G+ GNE D+ AK A
Sbjct: 967 KLAMRGQPVTIQWVPGHSGVVGNEQADQAAKRAA 1000
>gi|71004602|ref|XP_756967.1| hypothetical protein UM00820.1 [Ustilago maydis 521]
gi|46095681|gb|EAK80914.1| hypothetical protein UM00820.1 [Ustilago maydis 521]
Length = 270
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 29/215 (13%)
Query: 283 TFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
T + + +T++ AE AI +AL++ + + +I +++ + ++ ++ +G+P
Sbjct: 5 TTAIGSGSTVYCAELLAIRKALEH--GVANADSMIFCNNRDAVIRIG--ARHSGDPD--- 57
Query: 343 LDIFKALSHLQEWNISVRF--IWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
+S +QE S R +W+ GH GNE + LA+ P +
Sbjct: 58 ------ISSIQELTASRRITVVWIPGHRDNLGNERANFLAQSA------------PDDVI 99
Query: 401 RAVTDMQHEIQWRE-NVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSN 459
+A D + E +R N +++ +G K + T+ + R + +R+
Sbjct: 100 KAPADHREEAGFRPGNKTWKSSLRGSELKAINTLQSGETAKLCKHLERDQVSILAPIRTG 159
Query: 460 HAICQAYLHKINI-APTNLCQECLEREDMAHIILC 493
HA +YL + T+ C C RED H++LC
Sbjct: 160 HAGTYSYLKARKVPGKTDKCDRCGSREDRLHLLLC 194
>gi|331242858|ref|XP_003334074.1| hypothetical protein PGTG_15618 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 235
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 290 ATIFTAEAFAILQALKYV------SSIKENEVI-IITDSKSCLEKLKNTSKSNGNPSHLI 342
A+ F AE AI L + +S+ + +I I +D+++ L+ + +S+ N + +
Sbjct: 67 ASAFEAEVQAINIGLDIIKNEIQRNSLPSSNIINIFSDNQATLQVIAKPPRSSSNQA-IF 125
Query: 343 LDIFKALSHLQEWN-ISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
+ IF L++L + S+ +W H GI NE VD+LAKE +G N Q R
Sbjct: 126 IQIFDKLNYLISVHQASISLLWCPAHVGIPENEKVDQLAKEATKGNHQFNLK----QQPR 181
Query: 402 AVTDMQHEIQ 411
+++++Q I+
Sbjct: 182 SLSNIQQIIR 191
>gi|242763116|ref|XP_002340512.1| hypothetical protein TSTA_065780 [Talaromyces stipitatus ATCC
10500]
gi|218723708|gb|EED23125.1| hypothetical protein TSTA_065780 [Talaromyces stipitatus ATCC
10500]
Length = 190
Score = 47.0 bits (110), Expect = 0.030, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 292 IFTAEAFAILQALKY-VSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + E + ++ D+++ + +L++T+ G L L + A S
Sbjct: 37 VFDAELMGVASALEWALERHLEGPIYVLLDAQAAINRLQSTAPGAGQS--LALRAYGAAS 94
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV-RAVTDMQHE 409
L V WV H+G+ GNE D+ AK + L + + V RA T+ + +
Sbjct: 95 RLARSGRPVTIQWVPRHSGVEGNEQADQAAKRASIRPVGLGSEGLSLAFVRRACTEARRK 154
Query: 410 I--QW-RENVMSQNNNKGLFYK 428
W REN + + +G YK
Sbjct: 155 AVEDWARENAVQGAHRRGRAYK 176
>gi|156046084|ref|XP_001589597.1| reverse transcriptase [Sclerotinia sclerotiorum 1980]
gi|154693714|gb|EDN93452.1| reverse transcriptase [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1708
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 25/231 (10%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI--KENEVIII 318
G V+I+ + I + N GT +L ++ E F + +A++Y SSI + I
Sbjct: 1435 GVGIVAIQSNNRILYQERSNIGTNQL-----VYNGELFGVTRAIEYASSIAYTGQKFKIY 1489
Query: 319 TDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDR 378
+D+++ L +LK S G + + KA ++ + WV H + GNE D+
Sbjct: 1490 SDNQAGLYRLKTPSDHPGQANQI--RAIKAAEVIRAKGAEISLNWVPDHTSVEGNELADK 1547
Query: 379 LAKE--TARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK 436
LAKE T + T + + V+ Q ++ + N + Y LF
Sbjct: 1548 LAKEATTIQPTSNETSFGLLGMTVKEYASDQWLNTLKQYELRSNQSPST-YSKLF----- 1601
Query: 437 KPW-FAKAIPL-----RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQEC 481
PW I L R F +L+ H ++YLH+ + N C E
Sbjct: 1602 -PWKIGSKIKLPSGTTRNTASAFFQLKLGHGYIKSYLHRFKLT-NNKCIEL 1650
>gi|220925641|ref|YP_002500943.1| ribonuclease H [Methylobacterium nodulans ORS 2060]
gi|219950248|gb|ACL60640.1| ribonuclease H [Methylobacterium nodulans ORS 2060]
Length = 223
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAV 403
VR++WVRGHAG GNE DRLA E R L P P + AV
Sbjct: 113 VRWVWVRGHAGEEGNERADRLAAEGRRAALGLPPLSSPAPALAAV 157
>gi|443912460|gb|ELU35889.1| RNase H domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 243
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 16/204 (7%)
Query: 292 IFTAEAFAILQALKYVSSIK-ENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
++ AE ++ L+ ++ + E I D+++ L LK + +L + + +
Sbjct: 34 VYEAEVVGLILGLELLARERGAGEAIFFIDNQAVLLTLK--AGHTNKLGYLYAHMDEGIR 91
Query: 351 HLQEWNISVRF--IWVRGHAGIAGNEAVD---RLAKETARGTDALNPYP----IPVQDVR 401
+E N V+ W+ GH G+ GN+ D +LA T+ L P P IPV
Sbjct: 92 RAREANPGVKLEARWIPGHKGVDGNKRADVEAKLAATPGNNTNTLLPGPLKKAIPVNPTA 151
Query: 402 AVTD--MQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP--LRKFIVTFNRLR 457
A + + E +W + + + N + L T F KA R T +LR
Sbjct: 152 AKRERKARMEGEWADWIEDEGNPRRTQALRLIDNTYPSMNFKKAADSLTRMEYATLTQLR 211
Query: 458 SNHAICQAYLHKINIAPTNLCQEC 481
+ H YL + +A + C C
Sbjct: 212 TGHYPTSTYLFRTTLADSPRCPHC 235
>gi|403413368|emb|CCM00068.1| predicted protein [Fibroporia radiculosa]
Length = 526
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 34/237 (14%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQAL-KYVSSIKEN--EVIIITDSKSCLEKLKNTSKSNG 336
NSG F TIF AE A+ + + + +N +++ D+ L K+ N
Sbjct: 130 NSGKFGAGR-CTIFDAEMMALARGIHSALHDAPQNCTHLVLCVDNAGALSKILNCEM--- 185
Query: 337 NPSHLIL-----DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
PS L+ + K L ++ +IS+ +WV H + NE VD LAK
Sbjct: 186 GPSQLVSILAAEKVMKFLQRSEQHHISL--LWVPSHKDVPPNEFVDELAKSALEYEQ--- 240
Query: 392 PYPIPVQDVRAVTD--MQHEIQWRENVMSQNNNKGLFYKNLFTITDKKP---WFAKAIPL 446
P V RA+ D + +I+W S +G +N++ + + P +A P+
Sbjct: 241 --PEFVSQARAMADCLTRAKIKW-AKYYSSYKYRG---RNMWILKNHNPLSHLSTRAYPM 294
Query: 447 RKF------IVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
R + R+ SNH C +Y + +I + C +D H + CP +
Sbjct: 295 RYLGKNNQGMARAARVLSNHFPCGSYREEYHIPGPHNCPCSGTLDDRDHTLFDCPMW 351
>gi|170046226|ref|XP_001850675.1| ribonucleoprotein [Culex quinquefasciatus]
gi|167869061|gb|EDS32444.1| ribonucleoprotein [Culex quinquefasciatus]
Length = 1200
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 356 NISVRFIWVRGHAGIAGNEAVDRLAKETARGTD-------ALNPYPIPVQDVRAVTDMQH 408
N + +WVR H I GNE D LAK+ A D L Y P Q RA+ D Q
Sbjct: 914 NAGITVVWVRAHCSIPGNEKADLLAKKGAESGDIFERRISLLECYGFPRQ--RALLDWQ- 970
Query: 409 EIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL-RKFIVTFNRL 456
QW + KG + ++ +K WF K I L R FI T +RL
Sbjct: 971 -TQW------DGDTKGRWMYSIRPKVQRKAWF-KGIDLTRGFIRTMSRL 1011
>gi|345562356|gb|EGX45424.1| hypothetical protein AOL_s00169g30 [Arthrobotrys oligospora ATCC
24927]
Length = 396
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNGNPSHLI---- 342
AT AE AIL+A++ K E++I TDSK C+ + +SNG +
Sbjct: 285 ATNNRAELSAILRAIEIAP--KHREILIFTDSKYAIQCVTEWFQKWRSNGWQTAAGKPVE 342
Query: 343 -LDIFKALSHLQEWNIS-----VRFIWVRGHAGIAGNEAVDRLAKETA 384
DI + + +L E I+ +F WV GH G+ GNE D+LA++ A
Sbjct: 343 NQDIIEEILNLIEERITQGGAKTKFEWVNGHKGVVGNEMADKLARDGA 390
>gi|321452689|gb|EFX64018.1| hypothetical protein DAPPUDRAFT_334682 [Daphnia pulex]
Length = 197
Score = 46.6 bits (109), Expect = 0.046, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Query: 239 TAEAFAILQALKYASSIKEKEAGYCKVSIRESLW--IFDTQNKNSGTFKLKNFATIFTAE 296
T F L + A+SI+ G K S +E+ IF + L ++IFTAE
Sbjct: 7 TTSLFNTLDSSAPATSIRAYTDG-SKSSSQETTTCAIFIPALNKEHAWTLTKGSSIFTAE 65
Query: 297 AFAILQALK--YVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AI QALK YV E I +DS S + + + S S + I + ++ L+
Sbjct: 66 VTAIYQALKLFYVMDDCPPEAFIYSDSSSAITAISSNSLSE---NEAITATREIIASLKS 122
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLA 380
R W+ H GI GNE DRLA
Sbjct: 123 SGTRTRLTWIPSHTGIEGNERTDRLA 148
>gi|261336140|dbj|BAI44772.1| pol-like protein [Alternaria alternata]
Length = 1295
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 276 TQNKNSGTFKLKNFATIFTAE----AFAILQALKYVS-SIKENEVIIITDSKSCLEKLKN 330
TQ S +T++ AE + A+ A +Y S + +V I TD+++ + +
Sbjct: 1004 TQQTRSVHMGSDTESTVYAAELQGISLALQIAQEYASRNGARRDVAIYTDNQAAVWSIAK 1063
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
+G ++++ +I + + LQ+ +V W+ H GI GNEAVD+ AKE
Sbjct: 1064 VEGRSG--AYILAEIARQVRELQDNGRTVTVRWIPAHVGIPGNEAVDKAAKE 1113
>gi|342320283|gb|EGU12224.1| Pol-like protein [Rhodotorula glutinis ATCC 204091]
Length = 1320
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 286 LKNFATIFTAEAFAILQALKYV--SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
L T++ E I AL V ++ + +++ D+ S L L + + ++G HL L
Sbjct: 981 LGQHQTVYAGELEGIRMALHAVLQTADRPPHILLSVDNTSALTHLTDPAPTSGQ--HLRL 1038
Query: 344 DIFKALSHLQEWNISVRFI--WVRGHAGIAGNEAVDRLAKETAR 385
I L+ +S I W GH G+AGNE D AK+ R
Sbjct: 1039 AIRGTFEKLKRTCVSTTIILSWSPGHVGVAGNEVADLAAKDAVR 1082
>gi|156040838|ref|XP_001587405.1| hypothetical protein SS1G_11397 [Sclerotinia sclerotiorum 1980]
gi|154695781|gb|EDN95519.1| hypothetical protein SS1G_11397 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 398
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 343 LDIFKA------LSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIP 396
LDI +A L HL I +R WV GH I GNEAVD+ AKE A AL P P
Sbjct: 231 LDISRAWAQRPRLPHLPPSEIRIR--WVPGHLNILGNEAVDKAAKERA----ALPPPSNP 284
Query: 397 VQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKN-LFTITDKKPWFAKAIPLRKFIVTFNR 455
+ + ++ + + ++ N +YK+ L+T T+ F+ +I+T
Sbjct: 285 ICTLASLKRLAKVNACKADIQLWNIISPQYYKDLLYTHTNNTILFSLKRATLSYILT--- 341
Query: 456 LRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
+RS H Y + N L +R+ H+ C
Sbjct: 342 IRSQHRDFAKYHKRFNHTSALLLCSYKKRKTPLHLFFC 379
>gi|353246588|emb|CCA76851.1| hypothetical protein PIIN_10836 [Piriformospora indica DSM 11827]
Length = 431
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ---------------EWNIS- 358
+ I D+++ ++ ++N S G H+I I +A+ L+ E I+
Sbjct: 168 IKISLDNQAAIQGMENVSAKAGQ--HIIRKIHRAIDKLRNDQKHRRELVEASDNETRINR 225
Query: 359 ---VRFIWVRGHAGIAGNEAVDRLAKET-ARGTDALNPYPIPVQD--VRAVTDMQHEIQW 412
+ WV GH GI GN+A D AK+ G+ P ++D ++ ++ ++ E++
Sbjct: 226 STQITLTWVPGHEGIEGNKAADEEAKKAITDGSSTAATLPPWMKDTLLQNISALRQELKL 285
Query: 413 RENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFI-----------VTFNRLRSNHA 461
+ N +K+ +P + +P K++ V +LR+ H
Sbjct: 286 AARKSAHNK-----WKSSARYDRTRP-IDETMPSNKYLQITDELMRAEAVALIQLRTGHI 339
Query: 462 ICQAYLHKINIAPTNLCQECLE--REDMAHIILCCPKYQVTLA 502
+L+ IN A C C E E++ H++ CP Y A
Sbjct: 340 GLNKHLNHINRADAPWCPHCGEGNAENITHLLHICPAYNAARA 382
>gi|392561769|gb|EIW54950.1| RnaseH-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 377
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 27/185 (14%)
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD---VR 401
I + +S L+ + F WV+GH+G+ GNE DRLA E A P +P + VR
Sbjct: 46 IKEVVSLLRSRSAPTTFKWVKGHSGVRGNEEADRLAGEGAACPPPARPLHLPAPERYMVR 105
Query: 402 AVTDMQHEIQWR---ENVMSQN--NNKGLFYKNLFTIT-DKKPWFAKAIP-------LRK 448
+ + H Q R + + N +++ +NL T+ D + F P LR+
Sbjct: 106 GAS-LPHLTQ-RLAYQGIQEWNAKDDRPATLRNLLTVQRDLERAFGVRAPEQMVWNLLRR 163
Query: 449 FIV-------TFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCC--PKYQV 499
+ T+ L H + + + H +C C E M HI+ C P +V
Sbjct: 164 NPISRKARDFTWKALHEGHRVGKYWAHIPGYEDRAICPVCGVTETMEHILCQCEAPGQRV 223
Query: 500 TLAIA 504
A+A
Sbjct: 224 AWALA 228
>gi|84496895|ref|ZP_00995749.1| ribonuclease H [Janibacter sp. HTCC2649]
gi|84383663|gb|EAP99544.1| ribonuclease H [Janibacter sp. HTCC2649]
Length = 302
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILDI 345
E A+L L+ + + ++E++I DSK + K K K +G P + ++I
Sbjct: 42 GELTAVLDLLEQTADV-DDELVIYCDSKYTINSITQWMPGWKRKGWKKGDGKPV-MNVEI 99
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
+AL +VRF W++GH+G A NE DRLA A
Sbjct: 100 MQALDRAMAGRKNVRFEWIKGHSGHALNEEADRLANGAA 138
>gi|307213149|gb|EFN88665.1| hypothetical protein EAI_15637 [Harpegnathos saltator]
Length = 92
Score = 46.2 bits (108), Expect = 0.059, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEW 355
EA AIL+A+ ++ ++ I TD S + L +++ G S +IL + AL
Sbjct: 1 EAVAILRAVNTITEENLTKIGIFTDFLSTISTL-DSNDPEGKASGIILVVKFALWKAFIK 59
Query: 356 NISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ + W GH GI GNE D LA AR T+
Sbjct: 60 GLDISLFWTSGHKGILGNEIADGLAGLGARSTE 92
>gi|353247791|emb|CCA77176.1| hypothetical protein PIIN_11158 [Piriformospora indica DSM 11827]
Length = 321
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 47/225 (20%)
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHL-------QEW------------ 355
+ I D+++ ++ ++N S G H+I I +A+ L QE
Sbjct: 58 IKISLDNQAAIQGMENVSAKAGQ--HIIHKIHRAIDKLRNDQKRRQELVEASDDETRINQ 115
Query: 356 NISVRFIWVRGHAGIAGNEAVDRLAKET-ARGTDALNPYPIPVQDV--RAVTDMQHEI-- 410
+ + WV GH GI GN+A D AK+ G+ P +D + ++ ++ E+
Sbjct: 116 STQITLTWVPGHEGIKGNKAADEEAKKAITDGSSTAATLPPWTKDTLPQNISALRQELKL 175
Query: 411 --------QWRENV---MSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSN 459
+W+ + ++ ++ + ITDK +R +LR+
Sbjct: 176 AARKSAHDKWKSSAWYNRTRPIDETMPSNKYLQITDK--------LMRAEAAALIQLRTG 227
Query: 460 HAICQAYLHKINIAPTNLCQECLE--REDMAHIILCCPKYQVTLA 502
H +L++IN A C C E E++ H++ CP Y A
Sbjct: 228 HIRLNKHLNRINRADAPWCPHCGEGNAENITHLLHICPAYNAVRA 272
>gi|296419694|ref|XP_002839432.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635582|emb|CAZ83623.1| unnamed protein product [Tuber melanosporum]
Length = 405
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 271 LWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK- 329
+W D ++N T AE AIL+A+ +E V I TDS+ ++ +
Sbjct: 270 VWFGDKDSRNISEPLPGPRQTNSRAELTAILRAINVAPMHRE--VAIYTDSEYAIKCVTV 327
Query: 330 ---NTSKSN-----GNP---SHLILDIFKALSHLQEWNISVRFIWVRGHAGI-AGNEAVD 377
N SK+N G P LI+ I + L + + F WV+GH G GN D
Sbjct: 328 WHINWSKNNWITSVGRPVENQDLIIQILEKLKERERYGSKTSFEWVQGHTGRNDGNSEAD 387
Query: 378 RLAKETARGTDAL 390
RLA E AR +A+
Sbjct: 388 RLAVEGARIAEAM 400
>gi|86158499|ref|YP_465284.1| ribonuclease H [Anaeromyxobacter dehalogenans 2CP-C]
gi|123723063|sp|Q2IJL8.1|RNH_ANADE RecName: Full=Ribonuclease H; Short=RNase H
gi|85775010|gb|ABC81847.1| ribonuclease H [Anaeromyxobacter dehalogenans 2CP-C]
Length = 183
Score = 46.2 bits (108), Expect = 0.060, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 13/100 (13%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLEKL---------KNTSKSNGNPSHLILDIF 346
E A+L+AL+ + V +I+DS+ ++ L K ++G P L D+
Sbjct: 57 ELRAVLEALEGLPG--GEAVQVISDSRYVVDALSRWIHGWRRKGWRTASGEPV-LNRDLI 113
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG 386
+AL + ++SV + WVRGH G A NE VD+LA+ ARG
Sbjct: 114 EALD-ARARDLSVTYTWVRGHDGHAVNEVVDQLAQAAARG 152
>gi|154269728|ref|XP_001535793.1| hypothetical protein HCAG_09281 [Ajellomyces capsulatus NAm1]
gi|150410047|gb|EDN05435.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 360
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 80 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 139
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 140 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 192
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L PI V VR V + R+ +Y+ + KA
Sbjct: 193 AAPAYGLEATPI-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 251
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 252 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 305
>gi|242816856|ref|XP_002486830.1| hypothetical protein TSTA_052420 [Talaromyces stipitatus ATCC
10500]
gi|218713295|gb|EED12719.1| hypothetical protein TSTA_052420 [Talaromyces stipitatus ATCC
10500]
Length = 476
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 37/216 (17%)
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE----WNISVRFIWVRGHA 368
+E I TD+++ + +S+G +++ I + L L++ W VR WV GH
Sbjct: 212 HEATIYTDNQAAIRATCQPGRSSGQ--YILRRIVRHLGLLRDNRSRWR--VRLQWVPGHE 267
Query: 369 GIAGNEAVDRLAK----ETARGT------------DALNPYP-----IPVQDVRAVTDMQ 407
G+ GNE D+LAK E R T + P+ IP Q + +
Sbjct: 268 GVPGNEKADQLAKLAAVEATRRTQENAHIARISAPNQTTPHAARISYIPNQSTILMAVCR 327
Query: 408 HEI------QWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+ +W+E N+ + L Y+ + T + + R + +L++ +
Sbjct: 328 QRLHAGFAKRWKEQWEHANHGRHL-YRIIKAPTKMVLQLHEGL-RRAWSSVLIQLQTGKS 385
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+++L + I + C+ L +D AH+++ CP +
Sbjct: 386 ALRSFLASVRIEDSPQCECGLGDQDTAHVLIRCPTH 421
>gi|407915219|gb|EKG08944.1| hypothetical protein MPH_14104, partial [Macrophomina phaseolina
MS6]
Length = 341
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 20/196 (10%)
Query: 290 ATIFTAEAFAILQALKYVS--SIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFK 347
A ++ E I AL+ + K ++ + D+++ L +LK+ + + G
Sbjct: 156 ALVYNGELDGITTALELANKHGYKSKDIRVFADNQAALLRLKHPNNTPGQ--WWQQRAIH 213
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR-AVTDM 406
A L++ + V WV GH + GNE DRLAK+ P +D A M
Sbjct: 214 AARQLRDRDNKVTVEWVPGHVNVHGNEEADRLAKQATL-------IPPTTEDTSIAFYGM 266
Query: 407 Q-HEI---QWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAI 462
Q E+ +W+ ++S ++ Y FT K+ A +R+ +F +L+ H
Sbjct: 267 QLKEVLYNEWKSQLLSAPSSA---YSKAFTWKIKRKLIAPTT-VRETASSFYQLKIGHGY 322
Query: 463 CQAYLHKINIAPTNLC 478
++YL++ N + C
Sbjct: 323 FKSYLYRFNHVEDDRC 338
>gi|427798325|gb|JAA64614.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 339
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 283 TFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
T+KL + +T +E A+ A+ ++ N + DSK+ L+ L + + G+ L+
Sbjct: 193 TYKLCHVSTSTGSELAALRGAVNHIKEQPANRWAVFCDSKAALQCLSSALR-RGSYEQLV 251
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPI 395
+I + L ++ E V F W+ H I+GN+ D A+E A+G +L P+
Sbjct: 252 WEIREMLHNVTEQGHDVVFQWLPSHCCISGNDLADEAARE-AQGETSLVSIPL 303
>gi|242797147|ref|XP_002482953.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218719541|gb|EED18961.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1538
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 31/232 (13%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
A +F AE I AL+ V ++II DS++ ++ + K+ ++ I +
Sbjct: 1266 ANVFLAELVGIHMALEMVQQRIVRKMIIFYDSQAAIQAIDGAQKTG---QQILGSIAEKW 1322
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA--------RG------TDALNPYPI 395
L+ + V W+ H GI GNE D AKE RG D+ P +
Sbjct: 1323 DELRSQGVQVTIHWIPAHQGIEGNERADIAAKEATGWRLVRNNRGRQVPLDMDSTAPRLV 1382
Query: 396 PVQDVRAV--TDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL-----RK 448
+Q + D++ + Q N +G + LF + DK K I L R
Sbjct: 1383 GLQQPLSALKRDLKTLAYKQWEQNWQQNQRG---RTLFRVVDKPS--KKNIELHTRLSRP 1437
Query: 449 FIVTFNRLRSNHAICQAYLHKINIAPTN--LCQECLEREDMAHIILCCPKYQ 498
++R+ + + +L+K I + CQ + + HI+L CP+++
Sbjct: 1438 LSSILTQMRTGNISLRHFLYKRKIPGIDNGECQCQRGAQTVTHILLSCPRFK 1489
>gi|242826977|ref|XP_002488743.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712135|gb|EED11562.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 768
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 93/226 (41%), Gaps = 26/226 (11%)
Query: 290 ATIFTAEA----FAILQALKYV-SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
+T++ AEA FA+ AL+ +I+ +++I +DS++ L L N +G I D
Sbjct: 451 STVYAAEACGIKFALETALQIADQNIQTKKLVIFSDSQAALRTLMNPRMVSGQT--YIYD 508
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRL--------AKETARGTDALNPYPIP 396
+L + +I V W+ GH GI GNEA DR A+ D N +
Sbjct: 509 CIDSLRKCIDEDIDVTLRWIPGHEGIPGNEAADRAAKRAALIGARRQIVPGDIGNWTILA 568
Query: 397 V---QDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVT- 452
+ +R T E QW G K L T K+ LRK +
Sbjct: 569 AAAKRRIRQSTKDAWEKQW------DKQKAGKPTKKLVTQPSKRT-LQYWTFLRKATSSI 621
Query: 453 FNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
+LR+ YL +IN C L + + HI++ CP Y+
Sbjct: 622 LIQLRTERIGLAHYLWRINRREQPYCACGLSGQSVRHILMECPLYE 667
>gi|294880741|ref|XP_002769128.1| reverse transcriptase, putative [Perkinsus marinus ATCC 50983]
gi|239872279|gb|EER01846.1| reverse transcriptase, putative [Perkinsus marinus ATCC 50983]
Length = 1463
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKEN---EVIIITDSKSCLE------KLKNTSKSN 335
+L ++AT+ E I A ++S + N + +I +DS++ + KL++TS N
Sbjct: 783 RLPDYATVMQGELGGIEAAANRLTSTRINPLKQAVIYSDSQAAIRAVVGRGKLESTSVRN 842
Query: 336 GNPSHLILDIFKALSHLQEWNISVRFI--WVRGHAGIAGNEAVDRLAKETARGTDALN-- 391
+ ++ +S + W R HAGI+GNE D LA+ + D N
Sbjct: 843 ARRA------------VERAAVSCDLVIQWTRAHAGISGNEIADTLARLGGKRKDITNVG 890
Query: 392 -PYPIPVQDVRAVTDMQHEIQWREN 415
P V V+A + E +WR++
Sbjct: 891 IPESYTVHQVKAKFREEEEWRWRKD 915
>gi|390601825|gb|EIN11218.1| hypothetical protein PUNSTDRAFT_62851 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 416
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 102/253 (40%), Gaps = 33/253 (13%)
Query: 270 SLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK 329
+WI D N + + + E A+L AL+ ++ ++ TDS ++ L
Sbjct: 8 GVWIPDIPNASKAVRVPGDKHSNQRGEIAAVLVALQAMAPFVP--ILFKTDSMYVIDGLT 65
Query: 330 N---TSKSNGNPSHLILDIFKALS-HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
T + G D+FKA + HL+ + + F+WV+GH+G GNE D LAKE
Sbjct: 66 THLPTWEDIGWIGVANSDLFKATAFHLRRRSATTDFVWVKGHSGEEGNERADVLAKEGTN 125
Query: 386 G--TDALNPYPIPVQDVRA--VTDMQHEIQWRENVMSQNNNK---------------GLF 426
D L+ P D+R ++ M + + E +M+ K +
Sbjct: 126 KDRADTLDLSIPPEFDLRGAKLSAMTQSLLY-EGIMTHKGLKTVRPAALAPLDMARHAIQ 184
Query: 427 YKNLFTITDKKPWFAKAI-----PLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQEC 481
N + D W + P+R+ + + + +H + + + + + C C
Sbjct: 185 RTNGVMLDDGTLWKSTKCKDLRQPVRQLL--YRAMHGSHKLGKFWQNVPGLTEREACAYC 242
Query: 482 LEREDMAHIILCC 494
+ E M HI+ C
Sbjct: 243 GDEESMEHIMTEC 255
>gi|443708866|gb|ELU03797.1| hypothetical protein CAPTEDRAFT_187709 [Capitella teleta]
Length = 213
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 181 PEYAKQNCFLNEVKDKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTA 240
P Y +N F N + DK+P+ +IFTDGSK+ +VA + T + +L + A+IF+A
Sbjct: 99 PNYTLKNEFYN-LMDKYPDHKVIFTDGSKSDSAVACS--ATADNLRIQIRLPDSASIFSA 155
Query: 241 EAFAILQAL 249
E AI Q L
Sbjct: 156 ELLAIYQVL 164
>gi|406963578|gb|EKD89592.1| hypothetical protein ACD_33C00036G0003 [uncultured bacterium]
Length = 500
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 294 TAEAFAILQALKYVSSIKENE-VIIITDSKSC-------LEKLKNTSKSNGNPSHLILD- 344
TAE A++ ALK + + + E V I+TDS L+K N N N ++
Sbjct: 104 TAELIAVITALKLATELLDIEHVTILTDSNYIVTAYSDNLDKWINNGWKNTNNKEIVHIA 163
Query: 345 ----IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVD 377
++ LS+L+E NI+V W++GH+G GN+ D
Sbjct: 164 EWKYVYLLLSNLKEKNITVNINWIKGHSGDHGNDTAD 200
>gi|343428928|emb|CBQ72473.1| related to Ribonuclease H [Sporisorium reilianum SRZ2]
Length = 203
Score = 45.8 bits (107), Expect = 0.082, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 20/101 (19%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNG---------NPSHLI 342
AE FA+++A YV+ + +V+I+TDS+ +C K + ++NG + LI
Sbjct: 68 AELFALIRA-AYVTRAETRQVVILTDSQYAINCAGKWLDKWQANGWKNARGTEVHNRDLI 126
Query: 343 LDIFKALSHLQEWNISVRFI--WVRGHAGIAGNEAVDRLAK 381
++ LS L +VR + +VR HAG AGNE DR+AK
Sbjct: 127 CELDSVLSRL-----AVRPVLQYVRAHAGHAGNEMADRMAK 162
>gi|156043751|ref|XP_001588432.1| hypothetical protein SS1G_10879 [Sclerotinia sclerotiorum 1980]
gi|154695266|gb|EDN95004.1| hypothetical protein SS1G_10879 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1486
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 87/227 (38%), Gaps = 45/227 (19%)
Query: 283 TFKLKNFATIFTAEAFAIL----QALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNP 338
+F L A +F AEA A + +AL + S ++ I D+ +L S NG
Sbjct: 1270 SFSLGTNAEVFDAEAMAAVTRAAKALAFPSIKLATDLWIFLDNYEVALRLG--SHFNGLS 1327
Query: 339 SHLILDIFKA---------LSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDA 389
+ D K L H+ I + WV GH I GNE D+ AKE A+
Sbjct: 1328 QAVFEDFLKLTQAWAARPRLPHIPPGKICIH--WVPGHLNIPGNEMADKAAKEGAK---- 1381
Query: 390 LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYK---NLFTITDKKPWFAKAIPL 446
L P P P D + W N++S K L YK N T++ K+
Sbjct: 1382 LPPPPNPASDNQL---------W--NIVSPQYYKDLQYKHTSNTITLSLKRATL------ 1424
Query: 447 RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
+I+ RS H AY + N + C +R+ H C
Sbjct: 1425 -HYILA---ARSQHGDFAAYHERFNHTTAHTLCSCGKRKTPLHFFFC 1467
>gi|242825941|ref|XP_002488542.1| hypothetical protein TSTA_109660 [Talaromyces stipitatus ATCC
10500]
gi|218712360|gb|EED11786.1| hypothetical protein TSTA_109660 [Talaromyces stipitatus ATCC
10500]
Length = 337
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 291 TIFTAEAFAILQALKYVSSIKE-----NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDI 345
T++ E I AL+ + + +E I TD+++ + +S+G +++ I
Sbjct: 46 TVYAGELEGIDAALEILLRSQPCDDNPHEATIYTDNQAAIRATCQPGRSSGQ--YILRRI 103
Query: 346 FKALSHLQE----WNISVRFIWVRGHAGIAGNEAVDRLAK-----------ETAR----- 385
+ L L++ W VR WV GH G+ GNE D+LAK E AR
Sbjct: 104 VRHLGLLRDNRSRWR--VRLQWVPGHEGVPGNEKADQLAKLAAVEATRRTQENARIARIS 161
Query: 386 GTDALNPYP-----IPVQDVRAVTDMQHEI------QWRENVMSQNNNKGLFYKNLFTIT 434
+ P+ IP Q + + + +W+E N+ + L Y+ + T
Sbjct: 162 APNQTTPHAARMSYIPNQSTILMAVCRQRLHAGFAKRWKEQWEHANHGRHL-YRIIKAPT 220
Query: 435 DKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
+ + R + +L++ + +++L + I + C+ L +D AH+++ C
Sbjct: 221 KMVLQLHEGL-RRAWSSVLIQLQTGKSALRSFLASVRIEDSPQCECGLGDQDTAHVLIRC 279
Query: 495 PKY 497
P +
Sbjct: 280 PTH 282
>gi|331702380|ref|YP_004399339.1| ribonuclease H [Lactobacillus buchneri NRRL B-30929]
gi|329129723|gb|AEB74276.1| ribonuclease H [Lactobacillus buchneri NRRL B-30929]
Length = 303
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
Query: 260 AGYCKVSIRESLWIFDTQNKNSGTFKLKN--FATIFTAEAFAILQALKYV--SSIKENEV 315
G+ K S + + W F Q + F+ AT E A L+ALKY+ ++ +
Sbjct: 95 GGHVKASDK-AAWAFLVQTGSQKYFESGGEFGATNNRMEIMAFLEALKYLKRQGLQNERI 153
Query: 316 IIITDSKSCLE----------KLKNTSKSNGNPSHLILDIFKAL-SHLQEWNISVRFIWV 364
++ DS+ L+ + + +KS+G+ H +++A+ ++L+++ I +R+ W
Sbjct: 154 GVVMDSQYVLDAIQKGWLAGWRRRGWNKSDGSKLH-NKQLWQAVDANLRDFPI-IRYYWT 211
Query: 365 RGHAGIAGNEAVDRLAKETARGTDALNPYPIPV 397
+GHAG GN VD L +T L+P P
Sbjct: 212 KGHAGDEGNVFVDHLLNQTMDQMGQLDPQASPA 244
>gi|170595213|ref|XP_001902289.1| RNase H family protein [Brugia malayi]
gi|158590103|gb|EDP28857.1| RNase H family protein [Brugia malayi]
Length = 212
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 286 LKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNGN 337
L+ T AE A+++A++ + +++I+ TDS ++ + KN K++
Sbjct: 99 LRGPPTNNRAELEAVIRAVQMAIQRRYHQLIVRTDSNLLIQTMNSWIHGWQKNGWKTSNG 158
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
+ D+ L+ L + NI+VRF V GH GI GNE D+LA+E A
Sbjct: 159 TTVKNQDLIIELNGLLK-NINVRFEHVAGHVGIYGNEKADQLAREGA 204
>gi|393224307|gb|EJD32758.1| hypothetical protein AURDEDRAFT_47828, partial [Auricularia
delicata TFB-10046 SS5]
Length = 95
Score = 45.4 bits (106), Expect = 0.091, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 295 AEAFAILQALKYVSSIKEN----EVIIITDSKSCLEKLKNTSKSNGNPSHLILD-IFKAL 349
AE + IL AL+ + EV+I D+ S ++ N +G LI D I +A+
Sbjct: 2 AELYGILLALRMAMRLLRRAPRPEVVIGLDNNSAAQRAHNPQARSG---QLITDAIHRAV 58
Query: 350 SHLQEWN--ISVRFIWVRGHAGIAGNEAVDRLAKETA 384
L++ + VR +WV GH GI GNE D AK A
Sbjct: 59 QDLRQKHPRTRVRLVWVPGHEGIPGNELADEHAKLAA 95
>gi|242804915|ref|XP_002484469.1| hypothetical protein TSTA_022890 [Talaromyces stipitatus ATCC
10500]
gi|218717814|gb|EED17235.1| hypothetical protein TSTA_022890 [Talaromyces stipitatus ATCC
10500]
Length = 440
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE----WNISVRFIWVRGHA 368
+E I TD+++ + +S+G ++I I + L L++ W VR WV GH
Sbjct: 220 HEATIYTDNQAAIRATCQPGRSSGQ--YIIRRIVRHLGLLRDNRSRWR--VRLQWVPGHE 275
Query: 369 GIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYK 428
G+ GN+ D+LAK + AV + +W ++ + Y+
Sbjct: 276 GVPGNKKADQLAK------------------LAAVEATRRFAKWWKDQWEYAKHGRHLYR 317
Query: 429 NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMA 488
+ T + + R + +L++ + +++L + I + CQ L +D A
Sbjct: 318 IIKEPTKTVLQLHEGLQ-RAWSSVLIQLQTGKSALRSFLASVRIEDSPQCQCGLGDQDTA 376
Query: 489 HIILCCP 495
H+++ CP
Sbjct: 377 HVLVRCP 383
>gi|212538155|ref|XP_002149233.1| ribonuclease H, putative [Talaromyces marneffei ATCC 18224]
gi|210068975|gb|EEA23066.1| ribonuclease H, putative [Talaromyces marneffei ATCC 18224]
Length = 420
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSK---------SNGNP---SHLI 342
AE AI++AL+ + V I+TDS+ ++ + N + S+G P LI
Sbjct: 287 AELTAIIRALEIAP--RHRPVTIVTDSRYSIDCVTNWFRKWIRNNWQTSDGKPVENKDLI 344
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I ++ ++ F WV+GH AGNE DRLA AR
Sbjct: 345 QSILVKINERDSLKVTTTFEWVKGHNRDAGNEEADRLAVNGAR 387
>gi|170040414|ref|XP_001847995.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863953|gb|EDS27336.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 362
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSC---LEKLK 329
+FD Q+ +LK +I TAE AI A++++ +++TDS+ L+K +
Sbjct: 192 VFDEQSGTRIMMQLKLGTSISTAETLAIQVAMQHIDKRGIQNAVLLTDSQPVCLFLKKSR 251
Query: 330 NTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
N+ N + ++ + + +Q W+ GH + GNE D LA++
Sbjct: 252 NSRMRNSVANDILEKAKRNRTTIQ---------WIPGHVQVDGNETADGLARQ 295
>gi|302510739|ref|XP_003017321.1| hypothetical protein ARB_04201 [Arthroderma benhamiae CBS 112371]
gi|291180892|gb|EFE36676.1| hypothetical protein ARB_04201 [Arthroderma benhamiae CBS 112371]
Length = 427
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 92/257 (35%), Gaps = 47/257 (18%)
Query: 143 EDITMSGDCPRDKRGIPPDPGKGSGNATQDDGDQYESAPEYAKQNCFLNEVKDKW-PNAY 201
E +G P +K +P PG GN D GD+Y A +D + PN
Sbjct: 170 EAFVRNGQTPSNKDSLPGAPGLMEGNPKDDAGDEY-----AAGTGPLPPGAEDGFDPNIL 224
Query: 202 LIFTDGS---KTSESVASAFYDTQNKNSGTFKLQNFATIFTAEAFAILQALKYASSIKEK 258
L T G KT E Q K SG + T +A QA
Sbjct: 225 LDPTTGKIVYKTPEQKQE--RKIQPKPSGPPGMLKIYTDGSALRNGTSQA---------- 272
Query: 259 EAGYCKVSIRESLWIF---DTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEV 315
R + ++ D +++N + T AE AI +AL K +V
Sbjct: 273 ---------RAGVGVYFGPDDESRNVSEPLAGSRQTNQRAELTAISRALDIAP--KHRDV 321
Query: 316 IIITDSKSCLE---------KLKNTSKSNGNP---SHLILDIFKALSHLQEWNISVRFIW 363
I TDSK ++ + N S P LI I + + + F W
Sbjct: 322 TIFTDSKYSIDCVTVWCINWQRNNWVTSTQKPVENKDLIQAILSKIEERKSLKVKTLFEW 381
Query: 364 VRGHAGIAGNEAVDRLA 380
V+GH AGNEA DRLA
Sbjct: 382 VKGHNKDAGNEAADRLA 398
>gi|242821851|ref|XP_002487765.1| hypothetical protein TSTA_001790 [Talaromyces stipitatus ATCC
10500]
gi|218712686|gb|EED12111.1| hypothetical protein TSTA_001790 [Talaromyces stipitatus ATCC
10500]
Length = 395
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 291 TIFTAEAFAILQALKYVSSIKE-----NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDI 345
T++ E I AL+ + + +E I TD+++ + +S+G +++ I
Sbjct: 105 TVYAGELEGIDAALEILLRSQPCDDNPHEATIYTDNQAAIRATCQPGRSSGQ--YILRRI 162
Query: 346 FKALSHLQE----WNISVRFIWVRGHAGIAGNEAVDRLAK-----------ETAR----- 385
+ L L++ W VR WV GH G+ GNE D+LAK E AR
Sbjct: 163 VRHLGLLRDNRSRWR--VRLQWVPGHEGVPGNEKADQLAKLAAVEATRRTQENARIARIS 220
Query: 386 GTDALNPYP-----IPVQDVRAVTDMQHEI------QWRENVMSQNNNKGLFYKNLFTIT 434
+ P+ IP Q + + + +W+E N+ + L Y+ + T
Sbjct: 221 APNQTTPHAARMSYIPNQSTILMAVCRQRLHAGFAKRWKEQWEHANHGRHL-YRIIKAPT 279
Query: 435 DKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
+ + R + +L++ + +++L + I + C+ L +D AH+++ C
Sbjct: 280 KMVLQLHEGL-RRAWSSVLIQLQTGKSALRSFLASVRIEDSPQCECGLGDQDTAHVLIRC 338
Query: 495 PKY 497
P +
Sbjct: 339 PTH 341
>gi|154283217|ref|XP_001542404.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410584|gb|EDN05972.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 375
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 98 NKQLASFSAALSPMSHVFDAEAVGACRALECTVKLLPCVTEDGSNPQIWLCLDNTSVIWG 157
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK+ T
Sbjct: 158 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKQAVSST 210
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 211 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 269
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 270 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 323
>gi|119195267|ref|XP_001248237.1| hypothetical protein CIMG_02008 [Coccidioides immitis RS]
Length = 474
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 36/168 (21%)
Query: 357 ISVRFIWVRGHAGIAGNEAVDRLAKETARG---------------TDALNPYPIPVQDVR 401
I++ WV H GI GNE DRLAKE A G TD P P +Q ++
Sbjct: 259 IAISLHWVPAHQGIKGNELADRLAKE-ATGWRQTCDSHNRTMEIDTDNTAPKPPYLQTLK 317
Query: 402 --AVTDMQHEIQ--WRENVMSQNNNKGLF------YKNLFTITDKKPWFAKAIPLRKFIV 451
A +++ ++Q W +++ + F +N+ + + + PL I+
Sbjct: 318 SSASSEINRQMQQEWAHQWVTETRGRSSFSLTPTPTQNILQLH-----LSISKPLSALII 372
Query: 452 TFNRLRSNHAICQAYLHKINIA--PTNLCQECLEREDMAHIILCCPKY 497
+LR+ + +LH N+ +CQ + + HI+L CP +
Sbjct: 373 ---QLRTTKIGLRDFLHHRNVPGFDDGICQCSRGSQTVQHILLTCPVF 417
>gi|443686560|gb|ELT89792.1| hypothetical protein CAPTEDRAFT_191632 [Capitella teleta]
Length = 257
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIK--ENEVIIITDSKSCLEKLKNTSKSNGNPSH-L 341
+L + A+IF+AE I Q L + + + + +I T+S S L+ L N N H
Sbjct: 145 RLSDSASIFSAELLDIYQVLTLLECLANDQQQFLIATNSLSSLQALGNF-----NIKHPY 199
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
+ I + + L + I + W H G+ GNE D LAKE
Sbjct: 200 VFKILEKCTLLHKKGIDLVISWCPSHVGVMGNERADLLAKE 240
>gi|328720146|ref|XP_003246964.1| PREDICTED: hypothetical protein LOC100568990, partial
[Acyrthosiphon pisum]
Length = 164
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 59/142 (41%), Gaps = 18/142 (12%)
Query: 361 FIWVRGHAGIAGNEAVDRLAKETARGTDA----LNPYPIPVQDVRAVTDMQHEIQWRENV 416
++W GH GI GNE D A + A D + Y + ++ V D + IQW
Sbjct: 7 YMWAPGHCGIQGNEKADLEASKAASSPDTPLLNIYTYEDKKKQIKQVLDQKWLIQW---- 62
Query: 417 MSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA-ICQAYLHKINIAPT 475
++Q+ N+ T K P RK NRLR H I +L + N P
Sbjct: 63 INQHTKLNQIKNNIQTW--KNPGLN-----RKEETILNRLRIGHTFITHRHLMEKNDPP- 114
Query: 476 NLCQECLEREDMAHIILCCPKY 497
+C+ C + HII C KY
Sbjct: 115 -ICEMCGVDLTVKHIITECRKY 135
>gi|443706301|gb|ELU02423.1| hypothetical protein CAPTEDRAFT_206267 [Capitella teleta]
Length = 357
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIK--ENEVIIITDSKSCLEKLKNTSKSNGNPSH-L 341
+L + A+IF+AE I Q L + + + + +I T+S S L+ L N N H
Sbjct: 245 RLSDSASIFSAELLDIYQVLTLLECLANDQQQFLIATNSLSSLQAL-----GNFNIKHPY 299
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
+ I + + L + I + W H G+ GNE D LAKE
Sbjct: 300 VFKILEKCTLLHKKGIDLVISWCPSHVGVMGNERADLLAKE 340
>gi|313240910|emb|CBY33195.1| unnamed protein product [Oikopleura dioica]
Length = 391
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 289 FATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK-----------NTSKSNGN 337
++T EA AIL A+++ K ++ + TDSK C+ L N + +
Sbjct: 266 YSTNNFGEALAILHAVRHAKEKKFKKIEVRTDSKFCISALDVWIIKWKRFAVNGKWTKYD 325
Query: 338 PSHLI-LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
S +I +IF + ++ + V F V+GH G GNE D+LA + A
Sbjct: 326 KSPIIHQEIFSEIDDIRRKEVDVVFRHVKGHNGEVGNEQADKLAVKAA 373
>gi|342320199|gb|EGU12141.1| hypothetical protein RTG_01755 [Rhodotorula glutinis ATCC 204091]
Length = 539
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENE----VIIITDSKSCLEKLKNTSKSNGNPSH 340
++ T++T E + AL + + + V+I D+ S L + + S+G H
Sbjct: 212 RMGQRQTVYTGELDGLRLALASLLVTQSADTLLAVLISLDNTSALTHSTDLTPSSGQ--H 269
Query: 341 LILDIFKALSHLQEW--NISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
L L I +AL L +I VR W GH GI GNEA D AK R
Sbjct: 270 LRLAIRQALEELARTRKDILVRLSWSPGHVGIEGNEAADFEAKGAVR 316
>gi|341898711|gb|EGT54646.1| hypothetical protein CAEBREN_25594 [Caenorhabditis brenneri]
Length = 384
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKN-- 330
+FD Q SG+F N T E I + + + + N II TDS+ L+ +
Sbjct: 30 LFDRQLDTSGSFSFGN-QTNNRYELEGIKKGIDIIRRVNHNHFIIRTDSEYSLKSVTQYV 88
Query: 331 -TSKSNG---------NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
T K NG LI I + + L + V+F V+GH N DRLA
Sbjct: 89 KTWKKNGWKTASGEDVKNKKLIEKIHRYVMMLADRGKIVKFEHVKGHGTDEFNIEADRLA 148
Query: 381 KETARGTDALN 391
+ A G+DA++
Sbjct: 149 RAAATGSDAIH 159
>gi|294872352|ref|XP_002766253.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239866960|gb|EEQ98970.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 1013
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYV--SSIKENEVIIITDSKSCLEKLKN 330
I D +F+L +ATI E AI +AL+++ S K + + TDS++ + +KN
Sbjct: 755 IIDGSAVEKQSFRLPRYATIHQCELEAIRRALRWIAFSEHKGKQWRVFTDSQASILTIKN 814
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
+ S + DI + LS L +I W GH G NE VD LA + L
Sbjct: 815 --RVTTERSGIAQDIAR-LSLLVRADIH----WCPGHEGARWNEEVDVLANIGRKAFFPL 867
Query: 391 NPYPIPVQDVRAVTDMQHE 409
+ YP P + M E
Sbjct: 868 DRYPSPQVSTAFIKKMAKE 886
>gi|427783065|gb|JAA56984.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 456
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 89/227 (39%), Gaps = 30/227 (13%)
Query: 283 TFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
+FK + + AE A+ AL ++ + I TDSK+ L+ L + + +G L+
Sbjct: 198 SFKTDHPTSSTAAELAALRTALCVLNREQPQRWSIFTDSKAALQSLLSALR-HGPYEQLV 256
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR------GTDALNPYPIP 396
+I + E F W+ H G+ GNE D A+ +DA + I
Sbjct: 257 FEIRHLIHTSSEKGHQATFQWLPSHCGVIGNEHADNAARSALEEVIPLSRSDAASMLRII 316
Query: 397 VQDVRAVTDMQHEIQ-WRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL---RKFIVT 452
+D+ T Q +R++ + N F+ IP R+
Sbjct: 317 AKDISQPTLHTSRSQNYRQHHL---NALRRFH----------------IPTGLHRREATL 357
Query: 453 FNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQV 499
RL A ++Y +I +A LC C E + HI CP+Y V
Sbjct: 358 LCRLWLRVAFTKSYSFRIGMADNALCDACGTEETLQHIFCDCPRYAV 404
>gi|15639344|ref|NP_218793.1| ribonuclease H (rnhA) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025586|ref|YP_001933358.1| ribonuclease H [Treponema pallidum subsp. pallidum SS14]
gi|6685892|sp|O83372.1|RNH_TREPA RecName: Full=Ribonuclease H; Short=RNase H
gi|238689319|sp|B2S2V0.1|RNH_TREPS RecName: Full=Ribonuclease H; Short=RNase H
gi|3322632|gb|AAC65340.1| ribonuclease H (rnhA) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189018161|gb|ACD70779.1| ribonuclease H [Treponema pallidum subsp. pallidum SS14]
Length = 169
Score = 45.1 bits (105), Expect = 0.12, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDS---KSCLEKLKNTSKSNGNPSHLIL-----DIFK 347
E A++ AL+ V+++TDS + + + +T K NG + D+++
Sbjct: 63 ELCAVINALQEAHGRAAEAVVVVTDSQYVRKGITQWIHTWKHNGWKTAAKQPVKNKDLWE 122
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
ALS L + +SV + WV+GHAG NE DRLA + AR
Sbjct: 123 ALSALAD-ALSVEWRWVKGHAGDPYNELCDRLATDAAR 159
>gi|378972855|ref|YP_005221459.1| ribonuclease H [Treponema pallidum subsp. pertenue str. SamoaD]
gi|378973922|ref|YP_005222528.1| ribonuclease H [Treponema pallidum subsp. pertenue str. Gauthier]
gi|378974984|ref|YP_005223592.1| ribonuclease H [Treponema pallidum subsp. pallidum DAL-1]
gi|378981831|ref|YP_005230136.1| ribonuclease H [Treponema pallidum subsp. pertenue str. CDC2]
gi|384421876|ref|YP_005631235.1| ribonuclease HI [Treponema pallidum subsp. pallidum str. Chicago]
gi|408502233|ref|YP_006869677.1| ribonuclease H [Treponema pallidum subsp. pallidum str. Mexico A]
gi|291059742|gb|ADD72477.1| ribonuclease HI [Treponema pallidum subsp. pallidum str. Chicago]
gi|374677178|gb|AEZ57471.1| ribonuclease H [Treponema pallidum subsp. pertenue str. SamoaD]
gi|374678248|gb|AEZ58540.1| ribonuclease H [Treponema pallidum subsp. pertenue str. CDC2]
gi|374679317|gb|AEZ59608.1| ribonuclease H [Treponema pallidum subsp. pertenue str. Gauthier]
gi|374680382|gb|AEZ60672.1| ribonuclease H [Treponema pallidum subsp. pallidum DAL-1]
gi|408475596|gb|AFU66361.1| ribonuclease H [Treponema pallidum subsp. pallidum str. Mexico A]
Length = 169
Score = 45.1 bits (105), Expect = 0.12, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDS---KSCLEKLKNTSKSNGNPSHLIL-----DIFK 347
E A++ AL+ V+++TDS + + + +T K NG + D+++
Sbjct: 63 ELCAVINALQEAHGRAAEAVVVVTDSQYVRKGITQWIHTWKHNGWKTAAKQPVKNKDLWE 122
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
ALS L + +SV + WV+GHAG NE DRLA + AR
Sbjct: 123 ALSALAD-ALSVEWRWVKGHAGDPYNELCDRLATDAAR 159
>gi|156055132|ref|XP_001593490.1| hypothetical protein SS1G_04917 [Sclerotinia sclerotiorum 1980]
gi|154702702|gb|EDO02441.1| hypothetical protein SS1G_04917 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1581
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L +LK S G + KA
Sbjct: 1459 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRLKTPSDLPGQSCQI--KAIKAA 1516
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+Q + WV GH + GNE D LAKE +
Sbjct: 1517 EAIQNKGAEISLNWVPGHTFVQGNELADSLAKEATK 1552
>gi|380484386|emb|CCF40032.1| zinc knuckle [Colletotrichum higginsianum]
Length = 445
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 289 FATIFTAEAFAILQALKYVSSIKE-----NEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
+T++ E I+ AL+ ++ ++V+I TD+++ + +G S+L+
Sbjct: 173 ISTVYAGELQGIILALEIAEEDRQRGNNRSKVLIYTDNQAAIRSSARPKGKSG--SYLLQ 230
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
I LQE + WV H GI GNE D+ AKE
Sbjct: 231 TIAVKTQKLQEQGLKTEIRWVPAHTGIQGNEDADKAAKE 269
>gi|425773268|gb|EKV11633.1| Transposon I factor, putative [Penicillium digitatum Pd1]
Length = 726
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 293 FTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHL 352
F+AE A+ L + +K+ + ++T +K+ + L+N + +G + I+K + L
Sbjct: 471 FSAELAAMAHVLNTATGLKDYTITLLTSNKAAVLTLRNPRQQSGQ--EFVCRIYKLIKKL 528
Query: 353 QEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT---DALNPYPIP------VQDVRAV 403
Q V+ WV + + + LA+E AR + DAL P + R+
Sbjct: 529 QRNGNHVQLRWVPA----SEDNKLLGLAREQARTSTQEDALLQEHAPRMKSTTLNLARSQ 584
Query: 404 TDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAIC 463
T ++ + ++ + L K+ + D+ W K +LR+ A
Sbjct: 585 TVPRNTLPADVGKHAKRVDAALPGKHTRLLYDRLSW--------KEATVLAQLRTGMARL 636
Query: 464 QAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
YL +IN+A T+ C +E + H + C K+
Sbjct: 637 NGYLFRINVADTDQCACGQTKETVEHFLFRCRKW 670
>gi|302697371|ref|XP_003038364.1| hypothetical protein SCHCODRAFT_47645 [Schizophyllum commune H4-8]
gi|300112061|gb|EFJ03462.1| hypothetical protein SCHCODRAFT_47645, partial [Schizophyllum
commune H4-8]
Length = 266
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILDI 345
AE AI + L+ ++ + I+TDSK ++ + + K+NG P L + +
Sbjct: 166 AELIAIARVLETFPYKRDRPLKIMTDSKYSIQCFRDWIPNWRNRGWRKANGEPV-LNVGL 224
Query: 346 FKALSHLQEWNI----SVRFIWVRGHAGIAGNEAVDRLA 380
K + L E+ VR VRGH+G+ GNE DRLA
Sbjct: 225 IKYIDSLLEFRSRLGHKVRLEHVRGHSGVPGNEGADRLA 263
>gi|242788649|ref|XP_002481263.1| hypothetical protein TSTA_040230 [Talaromyces stipitatus ATCC
10500]
gi|218721410|gb|EED20829.1| hypothetical protein TSTA_040230 [Talaromyces stipitatus ATCC
10500]
Length = 119
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 310 IKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAG 369
I+ +++I +DS++ L+ L N +G I +L + NI V W+ GH G
Sbjct: 30 IRTKKLVIFSDSQAALKTLMNLRMVSGQ--TYIQGCVDSLRKCTDENIDVTLRWIPGHEG 87
Query: 370 IAGNEAVDRLAKETA 384
+ N+A DR AK TA
Sbjct: 88 VPRNKAADRAAKRTA 102
>gi|224048680|ref|XP_002197364.1| PREDICTED: ribonuclease H1 [Taeniopygia guttata]
Length = 299
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK--------NTSKSNG 336
+L T AE A +A++ + ++II TDSK + + N +++
Sbjct: 188 RLPGRQTNQRAEIHAACRAIEQAKTQNIKKLIIYTDSKFTINGITSWVDNWKTNGWRTSS 247
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
S + + F+ L +L + +I ++++ + GHAG GNE DRLA+E AR
Sbjct: 248 GGSVINKEDFERLDNLAK-DIEIQWMHIPGHAGFQGNEEADRLAREGAR 295
>gi|242827232|ref|XP_002488790.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712046|gb|EED11474.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1907
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 291 TIFTAEAFAILQALKYVSSIKE-----NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDI 345
T++ E I AL+ + + +E I TD+++ + +S+G +++ I
Sbjct: 1616 TVYAGELEGIDAALEILLRSQPCDDNPHEATIYTDNQAAIRATCQPGRSSGQ--YILRRI 1673
Query: 346 FKALSHLQE----WNISVRFIWVRGHAGIAGNEAVDRLAK-----------ETAR----- 385
+ L L++ W VR WV GH G+ GNE D+LAK E AR
Sbjct: 1674 VRHLGLLRDNRSRWR--VRLQWVPGHEGVPGNEKADQLAKLAAVEATRRTQENARIARIS 1731
Query: 386 GTDALNPYP-----IPVQDVRAVTDMQHEI------QWRENVMSQNNNKGLFYKNLFTIT 434
+ P+ IP Q + + + +W+E N+ + L Y+ + T
Sbjct: 1732 APNQTTPHAARMSYIPNQSTILMAVCRQRLHAGFAKRWKEQWEHANHGRHL-YRIIKAPT 1790
Query: 435 DKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
+ + R + +L++ + +++L + I + C+ L +D AH+++ C
Sbjct: 1791 KMVLQLHEGL-RRAWSSVLIQLQTGKSALRSFLASVRIEDSPQCECGLGDQDTAHVLIRC 1849
Query: 495 PKY 497
P +
Sbjct: 1850 PTH 1852
>gi|338706318|ref|YP_004673086.1| ribonuclease H [Treponema paraluiscuniculi Cuniculi A]
gi|335344379|gb|AEH40295.1| ribonuclease H [Treponema paraluiscuniculi Cuniculi A]
Length = 169
Score = 45.1 bits (105), Expect = 0.14, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDS---KSCLEKLKNTSKSNGNPSHLIL-----DIFK 347
E A++ AL+ V+++TDS + + + +T + NG + D+++
Sbjct: 63 ELCAVINALQEAHGRAAEAVVVVTDSQYVRKGITQWIHTWRHNGWKTAAKQPVKNKDLWE 122
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
ALS L + +SV + WV+GHAG NE DRLA + AR
Sbjct: 123 ALSALAD-TLSVEWRWVKGHAGDPYNELCDRLATDAAR 159
>gi|156052327|ref|XP_001592090.1| hypothetical protein SS1G_06329 [Sclerotinia sclerotiorum 1980]
gi|154704109|gb|EDO03848.1| hypothetical protein SS1G_06329 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 118
Score = 45.1 bits (105), Expect = 0.14, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 290 ATIFTAEAFAILQALKYV-----SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
+T++ AE I+ AL+ V + ++ TD+++ + + + +G +++I
Sbjct: 7 STVYVAEVQGIVSALEMVIEDAKKGNRRKRAVVFTDNQAAIRTFQMPTGRSG--AYIIAR 64
Query: 345 IFKALSHLQE-WNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPI 395
+ +Q+ + + W+ H G+ GNEA DR AKE P+ I
Sbjct: 65 AISLIDKIQQDLELEIELRWIPAHIGLCGNEAADRAAKEDVNAARDDKPWSI 116
>gi|425778859|gb|EKV16962.1| Transposon I factor, putative [Penicillium digitatum PHI26]
Length = 726
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 293 FTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHL 352
F+AE A+ L + +K+ + ++T +K+ + L+N + +G + I+K + L
Sbjct: 471 FSAELAAMAHVLNTATGLKDYTITLLTSNKAAVLTLRNPRQQSGQ--EFVCRIYKLIKKL 528
Query: 353 QEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT---DALNPYPIP------VQDVRAV 403
Q V+ WV + + + LA+E AR + DAL P + R+
Sbjct: 529 QRNGNHVQLRWVPA----SEDNKLLGLAREQARTSTQEDALLQEHAPRMKSTTLNLARSQ 584
Query: 404 TDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAIC 463
T ++ + ++ + L K+ + D+ W K +LR+ A
Sbjct: 585 TVPRNTLPADVGKHAKRVDAALPGKHTRLLYDRLSW--------KEATVLAQLRTGMARL 636
Query: 464 QAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
YL +IN+A T+ C +E + H + C K+
Sbjct: 637 NGYLFRINVADTDQCACGQTKETVEHFLFRCRKW 670
>gi|326916464|ref|XP_003204527.1| PREDICTED: ribonuclease H1-like [Meleagris gallopavo]
Length = 253
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSK-------SCLEKLK-NTSKSNG 336
+L T AE A +A++ S ++II TDSK S +E K N K++
Sbjct: 142 RLPGRQTNQRAEIHAACKAIEQAKSQNIKKLIIYTDSKFTINGITSWVENWKTNGWKTSS 201
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
S + + F+ L L + I ++++ + GHAG GNE DRLA+E A
Sbjct: 202 GGSVINKEDFQKLDSLSK-GIEIQWMHIPGHAGFQGNEEADRLAREGA 248
>gi|145238804|ref|XP_001392049.1| RNase H domain protein [Aspergillus niger CBS 513.88]
gi|134076548|emb|CAK39740.1| unnamed protein product [Aspergillus niger]
Length = 410
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCL--------EKLKNTSKSNGNPS----HLI 342
AE AIL+AL + +V I TDS+ + + +N + GN L+
Sbjct: 282 AELTAILRALDIAP--RHRDVTIFTDSQYAINCVTVWFTKWRRNNWMTAGNKPVDNKDLV 339
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + E + F WV+GH+ GNEA DRLA AR
Sbjct: 340 ESILSKIEERNELKVKTLFEWVKGHSSHPGNEAADRLAVSGAR 382
>gi|443694031|gb|ELT95266.1| hypothetical protein CAPTEDRAFT_227918 [Capitella teleta]
Length = 574
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 12/128 (9%)
Query: 363 WVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNN 422
W H G+ GNE D LAKE T IP D + +T + +W+E S+ N
Sbjct: 3 WCPSHVGVMGNERADLLAKEALSFTTCT--IRIPSSDFKPITHEFFKEKWQEQWSSEQEN 60
Query: 423 KGLFYKNLFTITDK-KPWFAKAIPLRKFIVTFNRLRSNHA-ICQAYLHKINIAPTNLCQE 480
K L++I W + +R+ + R R H+ + YL + + P +C
Sbjct: 61 K------LYSIQPTLGKWAKSSREIRREEIVLARARIGHSHLTHGYLVRREMPP--VCIP 112
Query: 481 CLEREDMA 488
C ++ D++
Sbjct: 113 CQKKRDLS 120
>gi|154287246|ref|XP_001544418.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408059|gb|EDN03600.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 362
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 91/234 (38%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 85 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 144
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 145 IRGSAAASSN-----WAYNRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 197
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 198 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRPTVEYQVKA 256
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 257 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 310
>gi|154283279|ref|XP_001542435.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410615|gb|EDN06003.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 351
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 67 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 126
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 127 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 179
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 180 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRQTVEYQVKA 238
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 239 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 292
>gi|331243639|ref|XP_003334462.1| hypothetical protein PGTG_15891 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 207
Score = 44.7 bits (104), Expect = 0.15, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 17/151 (11%)
Query: 258 KEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQAL----KYVSSIKEN 313
++ G + ++ +L +F + + S + KN +EA IL AL + V ++
Sbjct: 38 EKGGGAEAAVCPTLNVFSSYSLGSDSLVSKN-----ESEAVGILAALGLAKELVVELEIR 92
Query: 314 EVIIITDSKSCLEKLKNTSKSNGNPSHLIL-DIFKALSHLQEWNISVRFIWVRGHAGIAG 372
++I D++ + + + N P I +I K LS L + + F+W GH + G
Sbjct: 93 HIMIFVDNQGVIRRTND--PLNPKPGQRIFKEIDKTLSEL-PCGLKMSFVWCPGHRDVLG 149
Query: 373 NEAVDRLAKET----ARGTDALNPYPIPVQD 399
NE D LAKE G AL Y P D
Sbjct: 150 NELADELAKEALTDKPTGIGALQKYNGPFYD 180
>gi|358368950|dbj|GAA85566.1| ribonuclease H [Aspergillus kawachii IFO 4308]
Length = 412
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCL--------EKLKNTSKSNGNPS----HLI 342
AE AIL+AL + +V I TDS+ + + +N + GN L+
Sbjct: 283 AELTAILRALDIAP--RHRDVTIFTDSQYAINCVTVWFTKWRRNNWMTAGNKPVDNKDLV 340
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + E + F WV+GH+ GNEA DRLA AR
Sbjct: 341 ESILSKIEERNELKVKTLFEWVKGHSSHPGNEAADRLAVSGAR 383
>gi|408501521|ref|YP_006865440.1| ribonuclease H [Bifidobacterium asteroides PRL2011]
gi|408466345|gb|AFU71874.1| ribonuclease H [Bifidobacterium asteroides PRL2011]
Length = 331
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILDI 345
E A+LQAL+ + E ++I TDS+ + K K S G P I
Sbjct: 48 GELCAVLQALR--AHPGERPLVIETDSQYAINCSTTWVPGWKKKGWKNSQGKPVKNRPLI 105
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
+Q SVRF+WV+GHAG NE VD LA+
Sbjct: 106 EAIDQEIQARQGSVRFVWVKGHAGDTFNEKVDALAR 141
>gi|242825438|ref|XP_002488440.1| reverse transcriptase [C. elegans], putative [Talaromyces stipitatus
ATCC 10500]
gi|218712258|gb|EED11684.1| reverse transcriptase [C. elegans], putative [Talaromyces stipitatus
ATCC 10500]
Length = 1129
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 37/216 (17%)
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE----WNISVRFIWVRGHA 368
+E I TD+++ + +S+G +++ I + L L++ W VR WV GH
Sbjct: 865 HEATIYTDNQAAIRATCQPGRSSGQ--YILRRIVRHLGLLRDNRSRWR--VRLQWVPGHE 920
Query: 369 GIAGNEAVDRLAK-----------ETAR-----GTDALNPYP-----IPVQDVRAVTDMQ 407
G+ GNE D+LAK E AR + P+ IP Q + +
Sbjct: 921 GVPGNEKADQLAKLAAVEATRRTQENARIARISAPNQTTPHAARMSYIPNQSTILMAVCR 980
Query: 408 HEI------QWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+ +W+E N+ + L Y+ + T + + R + +L++ +
Sbjct: 981 QRLHAGFAKRWKEQWEHANHGRHL-YRIIKAPTKMVLQLHEGL-RRAWSSVLIQLQTGKS 1038
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+++L + I + C+ L +D AH+++ CP +
Sbjct: 1039 ALRSFLASVRIEDSPQCECGLGDQDTAHVLIRCPTH 1074
>gi|415716302|ref|ZP_11466329.1| ribonuclease H [Gardnerella vaginalis 1400E]
gi|388057564|gb|EIK80393.1| ribonuclease H [Gardnerella vaginalis 1400E]
Length = 353
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 344 DIFKAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
D+ +A+ S + + SV+F+WV+GHAG AGNE VD LA+ A
Sbjct: 125 DLIRAIDSEITKREGSVKFVWVKGHAGNAGNEKVDELARTYAE 167
>gi|341892209|gb|EGT48144.1| hypothetical protein CAEBREN_24105 [Caenorhabditis brenneri]
Length = 384
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 13/131 (9%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL---- 328
+FD Q SG+F N T E I + + + + N II TDS+ L+ +
Sbjct: 30 LFDRQLDTSGSFSFGN-QTNNRYELEGIKKGIDIIRRVNHNHFIIRTDSEYSLKSVTEYV 88
Query: 329 --------KNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
K S + LI I + + L + V+F V+GH N DRLA
Sbjct: 89 KAWKKNGWKTASGEDVKNKKLIEKIHRYVMMLADRGKIVKFEHVKGHGTDEFNIEADRLA 148
Query: 381 KETARGTDALN 391
+ A G+DA++
Sbjct: 149 RAAATGSDAIH 159
>gi|415711958|ref|ZP_11464494.1| ribonuclease H [Gardnerella vaginalis 55152]
gi|388057691|gb|EIK80516.1| ribonuclease H [Gardnerella vaginalis 55152]
Length = 353
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 344 DIFKAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
D+ +A+ S + + SV+F+WV+GHAG AGNE VD LA+ A
Sbjct: 125 DLIRAIDSEITKREGSVKFVWVKGHAGNAGNEKVDELARTYAE 167
>gi|392872128|gb|AFM85330.1| pol polyprotein, partial [Simian immunodeficiency virus]
Length = 1006
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AIL ALK + +V I+TDS+ L L+ T + +P L+ +I + L + +
Sbjct: 635 AELQAILLALKDA----KEKVNIVTDSQYVLGILQGTPDQSDSP--LVEEIIQELMNKE- 687
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+V WV H GI GNE VD+L + R
Sbjct: 688 ---AVYLNWVPAHKGIGGNEEVDKLVSKNIR 715
>gi|308235674|ref|ZP_07666411.1| ribonuclease H [Gardnerella vaginalis ATCC 14018 = JCM 11026]
gi|311114271|ref|YP_003985492.1| ribonuclease H [Gardnerella vaginalis ATCC 14019]
gi|310945765|gb|ADP38469.1| ribonuclease H [Gardnerella vaginalis ATCC 14019]
Length = 353
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 344 DIFKAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
D+ +A+ S + + SV+F+WV+GHAG AGNE VD LA+ A
Sbjct: 125 DLIRAIDSEITKREGSVKFVWVKGHAGNAGNEKVDELARTYAE 167
>gi|385802079|ref|YP_005838482.1| ribonuclease HI [Gardnerella vaginalis HMP9231]
gi|415702552|ref|ZP_11458698.1| ribonuclease H [Gardnerella vaginalis 284V]
gi|415705693|ref|ZP_11460964.1| ribonuclease H [Gardnerella vaginalis 75712]
gi|415706616|ref|ZP_11461605.1| ribonuclease H [Gardnerella vaginalis 0288E]
gi|333393107|gb|AEF31025.1| ribonuclease HI [Gardnerella vaginalis HMP9231]
gi|388052415|gb|EIK75439.1| ribonuclease H [Gardnerella vaginalis 75712]
gi|388053098|gb|EIK76089.1| ribonuclease H [Gardnerella vaginalis 284V]
gi|388054828|gb|EIK77763.1| ribonuclease H [Gardnerella vaginalis 0288E]
Length = 353
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 344 DIFKAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
D+ +A+ S + + SV+F+WV+GHAG AGNE VD LA+ A
Sbjct: 125 DLIRAIDSEITKREGSVKFVWVKGHAGNAGNEKVDELARTYAE 167
>gi|242797316|ref|XP_002482987.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218719575|gb|EED18995.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1249
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 37/216 (17%)
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE----WNISVRFIWVRGHA 368
+E I TD+++ + +S+G +++ I + L L++ W VR WV GH
Sbjct: 985 HEATIYTDNQAAIRATCQPGRSSGQ--YILRRIVRHLGLLRDNRSRWR--VRLQWVPGHE 1040
Query: 369 GIAGNEAVDRLAK----ETARGT------------DALNPYP-----IPVQDVRAVTDMQ 407
G+ GNE D+LAK E R T + P+ IP Q + +
Sbjct: 1041 GVPGNEKADQLAKLAAVEATRRTQENAHIARISAPNQTTPHAARMSYIPNQSTILMAVCR 1100
Query: 408 HEI------QWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+ +W+E N+ + L Y+ + T + + R + +L++ +
Sbjct: 1101 QRLHAGFAKRWKEQWEHANHGRHL-YRIIKAPTKMVLQLHEGL-RRAWSSVLIQLQTGKS 1158
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+++L + I + C+ L +D AH+++ CP +
Sbjct: 1159 ALRSFLASVRIEDSPQCECGLGDQDTAHVLIRCPTH 1194
>gi|417556417|ref|ZP_12207476.1| ribonuclease HI [Gardnerella vaginalis 315-A]
gi|333602912|gb|EGL14337.1| ribonuclease HI [Gardnerella vaginalis 315-A]
Length = 353
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 344 DIFKAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
D+ +A+ S + + SV+F+WV+GHAG AGNE VD LA+ A
Sbjct: 125 DLIRAIDSEITKREGSVKFVWVKGHAGNAGNEKVDELARTYAE 167
>gi|296423236|ref|XP_002841161.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637395|emb|CAZ85352.1| unnamed protein product [Tuber melanosporum]
Length = 564
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKEN----EVIIITDSKSCLEKLKNTSKSNGNPS 339
+ L TI+ AE +AI +A+ + ++ I DS++ L + + G S
Sbjct: 384 YGLGTRMTIYDAELYAIWKAIGLGGRVARERGAKKLTICADSQAALGVMARGTIGPG--S 441
Query: 340 HLILD---IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
HL L K L H I V WVR HAGI GN VD+LA+
Sbjct: 442 HLALRGRAQMKDLHHTH--GIDVALEWVRSHAGIRGNIRVDKLAR 484
>gi|154277392|ref|XP_001539537.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413122|gb|EDN08505.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 375
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 98 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 157
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 158 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 210
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 211 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRPTVEYQVKA 269
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 270 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 323
>gi|302685830|ref|XP_003032595.1| hypothetical protein SCHCODRAFT_40345 [Schizophyllum commune H4-8]
gi|300106289|gb|EFI97692.1| hypothetical protein SCHCODRAFT_40345, partial [Schizophyllum
commune H4-8]
Length = 138
Score = 44.7 bits (104), Expect = 0.18, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 291 TIFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
T+F AE A+ ++S K ++ DS++ ++ L+ + G L+ + + +
Sbjct: 3 TVFEAELVGASLAIDIIASTKRLTRAAVLLDSQAAIQALRGSGTKAGQ--QLVHEFWVRV 60
Query: 350 SHLQEWNISVRFI--WVRGHAGIAGNEAVDRLAKETARGT---------DALN-PYPIPV 397
L+ ++ I WV GH G+ GNE VD AK A G LN P P+
Sbjct: 61 HRLRASRRTLSLIVAWVPGHVGVEGNERVDAEAKAAAEGCGDTPLHDKRGLLNGPLPVSR 120
Query: 398 QDVRAVTDMQHEIQW 412
V A + + QW
Sbjct: 121 SAVIAAEKSRVQQQW 135
>gi|169626528|ref|XP_001806663.1| hypothetical protein SNOG_16556 [Phaeosphaeria nodorum SN15]
gi|160706113|gb|EAT76061.2| hypothetical protein SNOG_16556 [Phaeosphaeria nodorum SN15]
Length = 602
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 96/240 (40%), Gaps = 46/240 (19%)
Query: 288 NFATIFTAEAFAILQALKYVSSI-----KENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
+T++ AE I AL+ K ++ + TD+++ + + +G ++++
Sbjct: 333 TVSTVYAAELQGISLALQIAEQYVERGGKRRDIAVYTDNQAAIWSITKAEGRSG--AYIL 390
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE-TARGTDALNPYP------- 394
+I + + LQ+ V W+ H GI GNEA D AKE T D P
Sbjct: 391 EEIARQVQRLQDKGRPVTVRWIPAHVGIPGNEAADIAAKEATGWRADGRRQPPAEAPPKL 450
Query: 395 IPVQD-VRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTF 453
P++ +R Q E W ++ + N KG + +T + P +K + +
Sbjct: 451 FPLKSTLRRWCKTQAERTWADSWRA--NTKG---RATHRLTPR--------PTKKVLQLY 497
Query: 454 NRL--RSNHAICQAYLHKIN-------------IAPTNLCQECLEREDMAHIILCCPKYQ 498
L R + + Q KI I+P C E R+ AHI+L C Y+
Sbjct: 498 QGLSKRESALLVQMRTEKIGLNDFLFNRRVPEVISPRCACGE--RRQTAAHILLRCGIYK 555
>gi|451994160|gb|EMD86631.1| hypothetical protein COCHEDRAFT_1115199, partial [Cochliobolus
heterostrophus C5]
Length = 115
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLIL-DIFKALSHLQEWNISVRFIWVRGHAGIAGN 373
V I TD+++ + + +K+ G P IL DI + + LQ+ + W+ H G+ GN
Sbjct: 1 VAIYTDNQAAIWSI---AKAEGRPGTYILADIAQQIQQLQDRGQTATVHWIPAHLGMPGN 57
Query: 374 EAVDRLAKETAR 385
+A+D+ AKE R
Sbjct: 58 KAIDKAAKEATR 69
>gi|313239114|emb|CBY14091.1| unnamed protein product [Oikopleura dioica]
Length = 391
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 289 FATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK-----------NTSKSNGN 337
++T EA AIL A+++ K ++ + TDSK C+ L N + +
Sbjct: 266 YSTNNFGEALAILHAVRHAKEKKFKKIEVRTDSKFCISALDVWIIKWKRFAVNGKWTKYD 325
Query: 338 PSHLI-LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
S +I +IF + ++ + V F V+GH G GNE D+LA + A
Sbjct: 326 KSPIIHQEIFSEIDDIRRKEVDVVFRHVKGHNGEIGNEQADKLAVKAA 373
>gi|254464162|ref|ZP_05077573.1| RNA-directed DNA polymerase [Rhodobacterales bacterium Y4I]
gi|206685070|gb|EDZ45552.1| RNA-directed DNA polymerase [Rhodobacterales bacterium Y4I]
Length = 580
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEW 355
E A++QA+ + + VII +DSK + N S N H + F +S +E
Sbjct: 485 ELKAVIQAIDSIPT--GGAVIIRSDSKYVSNAVNNGSIVTSN--HDLWQEFVDVSKGRE- 539
Query: 356 NISVRFIWVRGHAGIAGNEAVDRLAKETA 384
+R +WV+GH G A NEA D LA++TA
Sbjct: 540 ---IRVVWVKGHDGDAFNEAADNLARQTA 565
>gi|121702361|ref|XP_001269445.1| RNase H domain protein [Aspergillus clavatus NRRL 1]
gi|119397588|gb|EAW08019.1| RNase H domain protein [Aspergillus clavatus NRRL 1]
Length = 402
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNP---SHLI 342
AE AIL+AL + +V I+TDS+ ++ + N ++ P LI
Sbjct: 274 AELTAILRALDIAP--RHRDVTIVTDSRYAIDCVTVWFIKWRRNNWLTADQKPVENKDLI 331
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + E + F WV+GH GNEA DRLA AR
Sbjct: 332 ESILVKIEERTELKVKTLFEWVKGHNRDPGNEAADRLAVSGAR 374
>gi|357608167|gb|EHJ65857.1| sugar transporter [Danaus plexippus]
Length = 971
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 50 PMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVKVIQM 109
P Q+G L G +GC + L +D +K + ++V WIDL A+ + HE M+ ++
Sbjct: 397 PNHQKGFLPGISGCLEHNTLLSESLKDARKSERQITVCWIDLENAFGSIQHELMLFALRW 456
Query: 110 YK 111
YK
Sbjct: 457 YK 458
>gi|332373760|gb|AEE62021.1| unknown [Dendroctonus ponderosae]
Length = 266
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSK---SCLEKL-----KNTSK-SNGNPSHLILD 344
TAE A ++ALK + S +V I TDS+ +C+ K KN K +NG P D
Sbjct: 162 TAEIQAPIEALKLLKSQGFKKVKIFTDSQFTINCITKWIHKWKKNQWKLANGGPVKNKED 221
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
+ + + Q++ + +++ + GH GI GNE DRLA+E A
Sbjct: 222 LVQLDALCQQF-LDIKWEYCAGHKGIKGNEEADRLAREGA 260
>gi|380490755|emb|CCF35795.1| reverse transcriptase [Colletotrichum higginsianum]
Length = 906
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 21/128 (16%)
Query: 282 GTFKLKNFATIFTAEAFA----ILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
G+ L + +F AEA A +L+A++ ++ + V I D+ + +L S +
Sbjct: 642 GSEPLGHQTEVFDAEAQAAFRGLLEAMRSPTARMADNVHICLDNLAVTARLVTRSPGSSQ 701
Query: 338 PSHLILDIFKALSHLQ-EWNISVRFIWVR----------GHAGIAGNEAVDRLAKETARG 386
F+A S L W R W R GH GIAGNE D LAKE R
Sbjct: 702 AR------FRAFSELSVSWAQRGRTSWTRPGRVYIWWCPGHTGIAGNEEADALAKEACRQ 755
Query: 387 TDALNPYP 394
P P
Sbjct: 756 IPESQPQP 763
>gi|387018090|gb|AFJ51163.1| Ribonuclease H1-like [Crotalus adamanteus]
Length = 294
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK--------NTSKSNG 336
+L T AE A +A++ S ++ I TDSK + + N K++
Sbjct: 183 RLHGRQTNQRAEIHAACKAIEQAKSQNIRKLAIYTDSKFTINGVTSWIPNWKINGWKTSA 242
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
+ F+ L+ L E + ++++ V GHAG GNEA DRLAKE A
Sbjct: 243 GKEVTNREDFERLAKLSE-GMDIQWMHVPGHAGFPGNEAADRLAKEGA 289
>gi|415726445|ref|ZP_11470784.1| ribonuclease H [Gardnerella vaginalis 00703Dmash]
gi|388063055|gb|EIK85647.1| ribonuclease H [Gardnerella vaginalis 00703Dmash]
Length = 330
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 344 DIFKAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
D+ +A+ + L + SV+F+WV+GHAG AGNE VD LA+
Sbjct: 109 DLIRAIDAELTKREGSVKFVWVKGHAGNAGNEKVDTLAR 147
>gi|156046148|ref|XP_001589626.1| hypothetical protein SS1G_09348 [Sclerotinia sclerotiorum 1980]
gi|154693743|gb|EDN93481.1| hypothetical protein SS1G_09348 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 806
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ +E + +A++Y +SI + N+ I +D+++ L +LK G + KA
Sbjct: 649 VYNSELLGVTKAIEYANSITQRGNKFKIYSDNQAGLFRLKTPFDLPGQSCQI--KAIKAA 706
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+Q + WV GH + GNE D LAKE +
Sbjct: 707 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATK 742
>gi|427791993|gb|JAA61448.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1031
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 310 IKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAG 369
+ V ++ DS++ L+ L N ++ G L+ F+AL+ SV F W+ H G
Sbjct: 963 LPTEPVAVLCDSRAALQTLANHRRA-GLTGSLLASKFRALT---ASGASVSFHWLPSHVG 1018
Query: 370 IAGNEAVDRLAK 381
IAGNE D LAK
Sbjct: 1019 IAGNEEADTLAK 1030
>gi|86357978|ref|YP_469870.1| ribonuclease H protein [Rhizobium etli CFN 42]
gi|86282080|gb|ABC91143.1| probable ribonuclease H protein [Rhizobium etli CFN 42]
Length = 165
Score = 44.3 bits (103), Expect = 0.22, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 18/112 (16%)
Query: 294 TAEAFAILQALKYVSSIKENEVIII-TDS----KSCLEK---LKNT----SKSNGNPSHL 341
+ E A+LQA+ +++S E I +DS K C ++ KN S NGN
Sbjct: 54 SMELTAVLQAVMWINSEATGEAATIWSDSIYAVKGCNDRRHIWKNNGWKKSGGNGNARSR 113
Query: 342 IL---DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA---KETARGT 387
+ +++KA+ N V W +GH+GIAGNE D LA + +ARGT
Sbjct: 114 TIANTELWKAVDLQLSQNALVTIAWCKGHSGIAGNERADELADGGRLSARGT 165
>gi|45384532|ref|NP_990329.1| ribonuclease H1 precursor [Gallus gallus]
gi|516686|dbj|BAA05382.1| unnamed protein product [Gallus gallus]
Length = 293
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSK-------SCLEKLK-NTSKSNG 336
+L T AE A +A++ S ++II TDSK S +E K N +++
Sbjct: 182 RLPGRQTNQRAEIHAACKAIEQAKSQNIKKLIIYTDSKFTINGITSWVENWKTNGWRTSS 241
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
S + + F+ L L + I ++++ + GHAG GNE DRLA+E A
Sbjct: 242 GGSVINKEDFQKLDSLSK-GIEIQWMHIPGHAGFQGNEEADRLAREGA 288
>gi|415727927|ref|ZP_11471530.1| ribonuclease H [Gardnerella vaginalis 6119V5]
gi|388065453|gb|EIK87935.1| ribonuclease H [Gardnerella vaginalis 6119V5]
Length = 329
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 344 DIFKAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
D+ +A+ + L + SV+F+WV+GHAG AGNE VD LA+
Sbjct: 109 DLIRAIDAELTKREGSVKFVWVKGHAGNAGNEKVDTLAR 147
>gi|156044024|ref|XP_001588568.1| hypothetical protein SS1G_10115 [Sclerotinia sclerotiorum 1980]
gi|154694504|gb|EDN94242.1| hypothetical protein SS1G_10115 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 650
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 292 IFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
++ E + +A++Y +SI + N+ I +D+++ L + K S G + KA
Sbjct: 525 VYNGELLGVTKAIEYANSIAQPGNKFKIYSDNQAGLFRSKTPSDLPGQSCQI--KAIKAA 582
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+Q + WV GH + GNE D LAKE +
Sbjct: 583 EAIQNKGAEISLNWVPGHTSVQGNELADSLAKEATK 618
>gi|402243584|gb|AFQ41105.1| pol protein, partial [Simian immunodeficiency virus]
Length = 297
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA+K E EV I+TDS+ L L + + +P L+ +I L ++
Sbjct: 31 AELQAIKLALQDSEGEVNIVTDSQYALGILSSCPDQSESP--LVQEIINLLIQKEK---- 84
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VD+L + R
Sbjct: 85 IYLNWVPAHKGIGGNEEVDKLVSKNVR 111
>gi|307206620|gb|EFN84599.1| hypothetical protein EAI_12749 [Harpegnathos saltator]
Length = 87
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 293 FTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHL 352
F E+ AIL+A+ ++ + N+V I +DS S + L N+ +G +I I +L
Sbjct: 1 FYVESMAILRAVTIAAAERPNKVGIFSDSFSTVNAL-NSPDLDGKSHRIIQRIKFSLWQT 59
Query: 353 QEWNISVRFIWVRGHAGIAGNEAVDRLA 380
++ W+ G+ I GNE DRLA
Sbjct: 60 SREGCNIVLAWIPGYKNIPGNEMADRLA 87
>gi|242811041|ref|XP_002485709.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218716334|gb|EED15756.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 733
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 37/216 (17%)
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE----WNISVRFIWVRGHA 368
+E I TD+++ + +S+G +++ I + L L++ W VR WV GH
Sbjct: 469 HEATIYTDNQAAIRATCQPGRSSGQ--YILRRIVRHLGLLRDNRSRWR--VRLQWVPGHE 524
Query: 369 GIAGNEAVDRLAK-----------ETAR-----GTDALNPYP-----IPVQDVRAVTDMQ 407
G+ GNE D+LAK E AR + P+ IP Q + +
Sbjct: 525 GVPGNEKADQLAKLAAVEATRHTQENARIARISAPNQTTPHAARMSYIPNQSTILMAVCR 584
Query: 408 HEI------QWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHA 461
+ +W+E N+ + L Y+ + T + + R + +L+++
Sbjct: 585 QRLHAGFAKRWKEQWEHANHGRHL-YQIIKAPTKMVLQLHEGL-RRAWSSVLIQLQTDKL 642
Query: 462 ICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+++L + I + C+ L +D AH+++ CP +
Sbjct: 643 ALRSFLASVQIEDSPQCECGLGDQDTAHVLIRCPTH 678
>gi|219882597|ref|YP_002477761.1| ribonuclease H [Arthrobacter chlorophenolicus A6]
gi|219861603|gb|ACL41944.1| ribonuclease H [Arthrobacter chlorophenolicus A6]
Length = 314
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 272 WIFDTQNK-----NSGTFKLKNFATIFTAEAFAILQALKYVSSIK------ENEVIIITD 320
WI T + T + I + E AI L+ V S + VII +D
Sbjct: 161 WIIATDDGTVLSVGQKTADVSRCGDILSGELLAIRWGLQSVISRHPVPAQGQGTVIIQSD 220
Query: 321 SKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE--WNISVRFIWVRGHAGIAGNEAVDR 378
S++ L LK T ++ +P+ +D K + + ++ V+F WV+GH G NEA DR
Sbjct: 221 SRAALRLLK-TLGADRHPAGCTIDQVKLARRILDEIGSMPVQFRWVKGHQGNEANEAADR 279
Query: 379 LA 380
LA
Sbjct: 280 LA 281
>gi|390595488|gb|EIN04893.1| ribonuclease H-like protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 430
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 32/178 (17%)
Query: 344 DIFKALS-HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG--TDALNPYPIPVQDV 400
D+FKA + HL+ + + F+WV+GH+G GNE D LAKE D L+ P ++
Sbjct: 97 DLFKATAFHLRRRSATTDFLWVKGHSGEEGNERADTLAKEGTNKDEADTLDLSIPPEFNL 156
Query: 401 RA--VTDMQHEIQWRENVMSQNNNK---------------GLFYKNLFTITDKKPWFAKA 443
R ++ M + + E V++ K + N + D+ W K+
Sbjct: 157 RGAKLSAMTQSMLY-ERVLAHKGPKTVHPAALTPLDMTRHAIKETNGVMLDDEALW--KS 213
Query: 444 I-------PLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
I P+R+ + + + +H + + + + + C C ++E + HI+ C
Sbjct: 214 IRCRDLRQPVRQLL--YRAMHGSHRLGKFWQNVPGLVEREACTYCGDKESLEHIMTGC 269
>gi|449283665|gb|EMC90270.1| Ribonuclease H1, partial [Columba livia]
Length = 256
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK--------NTSKSNG 336
+L T AE A +A++ S ++II TDSK + + N +++
Sbjct: 145 RLPGRQTNQRAEIHAACKAIEQAKSQNIKKLIIYTDSKFTINGITSWVDNWKTNGWRTSS 204
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
S + + F+ L +L + I ++++ V GHAG GNE DRLA+E A
Sbjct: 205 GGSVINKEDFERLDNLSK-GIEIQWMHVPGHAGFQGNEEADRLAREGA 251
>gi|421734761|ref|ZP_16173820.1| ribonuclease H [Bifidobacterium bifidum LMG 13195]
gi|407077335|gb|EKE50182.1| ribonuclease H [Bifidobacterium bifidum LMG 13195]
Length = 359
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNG------NP---SHLI 342
E A+L+AL+ + ++I TDS+ +C K + K NG P + LI
Sbjct: 55 GELCAVLEALRAHPGAEP--LVIETDSQYAINCSTKWVHGWKKNGWKNSQKKPVKNAALI 112
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
I LS SV+F+WV+GHAG AGNE VD LA+
Sbjct: 113 RAIDAELSRRAG---SVKFVWVKGHAGNAGNEKVDDLAR 148
>gi|212716350|ref|ZP_03324478.1| hypothetical protein BIFCAT_01267 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660603|gb|EEB21178.1| hypothetical protein BIFCAT_01267 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 408
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 344 DIFKAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
D+ +A+ + + + SV+F+WV+GHAG AGNE VD LA+
Sbjct: 92 DLIRAIDAEISKRPGSVKFVWVKGHAGNAGNEKVDELAR 130
>gi|261336121|dbj|BAI44754.1| pol-like protein [Alternaria alternata]
Length = 1186
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 288 NFATIFTAEAFAILQALKYVSSI-----KENEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
+T++ AE I AL + ++ + TD+++ + + +G ++++
Sbjct: 1019 TLSTVYAAELQGISLALHIAKEYADGDGERKDIAVYTDNQAVIWSIAKAEGRSG--AYIL 1076
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
I + + LQ +SV W+ H GI GNEA D+ AKE
Sbjct: 1077 AGIAQQVQELQNKGLSVTVRWIPAHVGIEGNEAADQAAKE 1116
>gi|154274438|ref|XP_001538070.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414510|gb|EDN09872.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 398
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 121 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 180
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 181 IRGSAAASSNWAY-----NRCHELLRQHNLGLK--WAPGHMGIGGNEEADRLAKRAVSST 233
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 234 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRPTVEYQVKA 292
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 293 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 346
>gi|353245015|emb|CCA76123.1| hypothetical protein PIIN_10123 [Piriformospora indica DSM 11827]
Length = 319
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKET-ARGTDALNPYP------IPVQDVRAVTDMQHEIQ 411
+ W+ GH GNEA D AK+ GT + + P +P ++ ++ E++
Sbjct: 118 MELTWLPGHEAAEGNEAADEEAKKAITEGTSSRDDLPGWLRHSLPAN----LSAVKQELK 173
Query: 412 WRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPL-----RKFIVTFNRLRSNHAICQAY 466
+++ + D+ K + L R+ +L + H + +
Sbjct: 174 RITKTEARDRRRESRRFKRAAKIDETMPLGKYLALTDGLTRREAALLTQLLTGHTCLKGH 233
Query: 467 LHKINIAPTNLCQECLER--EDMAHIILCCPKY 497
+++IN A T C C ER E + H++ CPKY
Sbjct: 234 VNRINRAETPWCPHCGERNYETLTHVLYICPKY 266
>gi|296113099|ref|YP_003627037.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis RH4]
gi|416158113|ref|ZP_11605552.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis 101P30B1]
gi|416217726|ref|ZP_11624459.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis 7169]
gi|416225073|ref|ZP_11626813.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis 103P14B1]
gi|416230940|ref|ZP_11628598.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis 46P47B1]
gi|416235518|ref|ZP_11630194.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis 12P80B1]
gi|416240473|ref|ZP_11632444.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis BC1]
gi|416242545|ref|ZP_11633581.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis BC7]
gi|416246634|ref|ZP_11635092.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis BC8]
gi|416249509|ref|ZP_11636606.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis CO72]
gi|416254841|ref|ZP_11638943.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis O35E]
gi|421779925|ref|ZP_16216415.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis RH4]
gi|295920793|gb|ADG61144.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis BBH18]
gi|326560092|gb|EGE10482.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis 46P47B1]
gi|326560475|gb|EGE10857.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis 7169]
gi|326561678|gb|EGE12015.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis 103P14B1]
gi|326564194|gb|EGE14430.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis 12P80B1]
gi|326565793|gb|EGE15955.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis BC1]
gi|326570446|gb|EGE20486.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis BC8]
gi|326571129|gb|EGE21153.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis BC7]
gi|326573423|gb|EGE23391.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis 101P30B1]
gi|326575681|gb|EGE25604.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis CO72]
gi|326577147|gb|EGE27041.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis O35E]
gi|407812719|gb|EKF83503.1| DNA polymerase III epsilon subunit [Moraxella catarrhalis RH4]
Length = 432
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 327 KLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG 386
KL+ K++G P L D+++ L L + N + + W++GHAG AGNE D+LA + G
Sbjct: 91 KLRGWKKADGKPV-LNQDLWQRLDQLTQ-NRIIDWQWIKGHAGHAGNEMADQLANKGVDG 148
Query: 387 -TDALNPYPI 395
D P PI
Sbjct: 149 FGDETLPNPI 158
>gi|115532542|ref|NP_001040786.1| Protein RNH-1.0, isoform c [Caenorhabditis elegans]
gi|351062499|emb|CCD70468.1| Protein RNH-1.0, isoform c [Caenorhabditis elegans]
Length = 251
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNGNPSHLILDIF 346
E A+ +A++ + +V+I TDS ++ + + K++ L D+
Sbjct: 148 GELIAVQKAIEKAIEKRLPKVVIKTDSNLLVQSMNIWIHGWKRKGWKTSTGSEVLNQDVL 207
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ +L++ + V+F+ VRGHAGI GNE D LA++ A+
Sbjct: 208 MKIDNLRQ-KLKVKFLHVRGHAGIDGNEKADELARKGAQ 245
>gi|313140907|ref|ZP_07803100.1| ribonuclease H [Bifidobacterium bifidum NCIMB 41171]
gi|313133417|gb|EFR51034.1| ribonuclease H [Bifidobacterium bifidum NCIMB 41171]
Length = 359
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNG------NP---SHLI 342
E A+L+AL+ + ++I TDS+ +C K + K NG P + LI
Sbjct: 55 GELCAVLEALRAHPGAEP--LVIETDSQYAINCSTKWVHGWKKNGWKNSQKKPVKNAALI 112
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
I LS SV+F+WV+GHAG AGNE VD LA+
Sbjct: 113 RAIDAELSRRAG---SVKFVWVKGHAGNAGNEKVDDLAR 148
>gi|443916292|gb|ELU37414.1| RNase H domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 835
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 91/233 (39%), Gaps = 49/233 (21%)
Query: 290 ATIFTAEAFAILQALKYVSSIKEN----EVIIITDSKSCLEKLKNTSKSNGNPSHLILDI 345
A I+ AE I L SI E +II D+++ ++ + + + +P+ I
Sbjct: 572 ANIYDAEMLGIALCLNRSVSIAEQVQAKRIIIYCDNQAAVKAISSLQR---HPAQYAARI 628
Query: 346 FKALSHLQEW-----NISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV 400
F H Q + N + W+ GH+ IAGNE D LAK G++ L P P+
Sbjct: 629 FH--QHAQRFLEKDPNHHITVKWLPGHSKIAGNELADELAK----GSETLQPTPV----- 677
Query: 401 RAVTDMQHEIQWRENVMSQNNNKG---LFYKNLFTITDKKPWFAKAIPLRKFIVTFNR-- 455
I W + + ++ + ++ ++ T D + + P K FNR
Sbjct: 678 -----FNRTITWAKTMATKRTTRDWMKVWTEHTITRPDSGTFIPRP-PALKLHPIFNRPT 731
Query: 456 -----------LRSNHAICQAYLHKI--NIAPTNLCQECLEREDMAHIILCCP 495
+ H AY + +I P C E + + H+++ CP
Sbjct: 732 YPRNVQCRLVQFLTGHGFYGAYSARFHPHIDPQCSCGEPSQTPE--HLLMFCP 782
>gi|71020815|ref|XP_760638.1| hypothetical protein UM04491.1 [Ustilago maydis 521]
gi|46100140|gb|EAK85373.1| hypothetical protein UM04491.1 [Ustilago maydis 521]
Length = 747
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTD--MQHEIQ-WREN 415
V +W+ GH I NE D LA+ A D P ++ AV +Q +Q W +
Sbjct: 553 VTVVWIPGHRDIPENERADTLAQGAA---DDATRLPADHREEAAVRHALLQRTMQAWTKA 609
Query: 416 VMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINI-AP 474
S L N + + +K +P R + ++R+ HA +YL K +
Sbjct: 610 WESTARGSELKAINTLRVGETVK-LSKHLP-RDQVSILAQIRTGHASTNSYLKKRKVPGK 667
Query: 475 TNLCQECLEREDMAHIILC 493
T+ C C RED H++LC
Sbjct: 668 TDKCDRCGSREDRLHLLLC 686
>gi|421735342|ref|ZP_16174285.1| ribonuclease H [Bifidobacterium bifidum IPLA 20015]
gi|407297372|gb|EKF16811.1| ribonuclease H [Bifidobacterium bifidum IPLA 20015]
Length = 359
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNG------NP---SHLI 342
E A+L+AL+ + ++I TDS+ +C K + K NG P + LI
Sbjct: 55 GELCAVLEALRAHPGAEP--LVIETDSQYAINCSTKWVHGWKKNGWKNSQKKPVKNAALI 112
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
I LS SV+F+WV+GHAG AGNE VD LA+
Sbjct: 113 RAIDAELSRRAG---SVKFVWVKGHAGNAGNEKVDDLAR 148
>gi|227494312|ref|ZP_03924628.1| prolyl aminopeptidase [Actinomyces coleocanis DSM 15436]
gi|226832046|gb|EEH64429.1| prolyl aminopeptidase [Actinomyces coleocanis DSM 15436]
Length = 662
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 272 WIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLE----- 326
W D +G FK T E +A+L LK + + E + I+ DS+ ++
Sbjct: 22 WAIDESTWRAGGFK---HGTNNIGELYAVLDLLKSTAHLDE-PLHILADSRYVIDSMTKW 77
Query: 327 ----KLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
K K+ K++G+P L +++ + + L + V F WVRGH+G NE VD A+
Sbjct: 78 IHGWKRKDWKKADGSPV-LNVELIQEIDALMQ-GRKVTFEWVRGHSGHDMNEFVDEKARA 135
Query: 383 TA 384
A
Sbjct: 136 AA 137
>gi|311064855|ref|YP_003971581.1| ribonuclease HI [Bifidobacterium bifidum PRL2010]
gi|390937408|ref|YP_006394967.1| ribonuclease H [Bifidobacterium bifidum BGN4]
gi|310867175|gb|ADP36544.1| Rnh Ribonuclease HI [Bifidobacterium bifidum PRL2010]
gi|389891021|gb|AFL05088.1| ribonuclease H [Bifidobacterium bifidum BGN4]
Length = 359
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNG------NP---SHLI 342
E A+L+AL+ + ++I TDS+ +C K + K NG P + LI
Sbjct: 55 GELCAVLEALRAHPGAEP--LVIETDSQYAINCSTKWVHGWKKNGWKNSQKKPVKNAALI 112
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
I LS SV+F+WV+GHAG AGNE VD LA+
Sbjct: 113 RAIDAELSRRAG---SVKFVWVKGHAGNAGNEKVDDLAR 148
>gi|242760200|ref|XP_002339941.1| hypothetical protein TSTA_060470 [Talaromyces stipitatus ATCC
10500]
gi|218723137|gb|EED22554.1| hypothetical protein TSTA_060470 [Talaromyces stipitatus ATCC
10500]
Length = 356
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 53/224 (23%)
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE----WNISVRFIWVRGHA 368
+E I TD+++ + + +S+G +++ I + L L++ W VR WV GH
Sbjct: 92 HEATIYTDNQAAIRAMCQPGRSSGQ--YILRRIVRHLGLLRDNRSRWR--VRLQWVPGHE 147
Query: 369 GIAGNEAVDRLAK-----------ETAR-----GTDALNPYP-----IPVQDVRAVTDMQ 407
G+ GNE D+LAK E AR + PY IP Q +
Sbjct: 148 GVPGNEKADQLAKLAAVEATRCTQENARIARISAPNQTTPYAARMSYIPNQSTILTAVCR 207
Query: 408 HEI------QWRENVMSQNNNKGLFY------KNLFTITD--KKPWFAKAIPLRKFIVTF 453
+ +W+E N+ L++ K + + + ++ W + I L+ +
Sbjct: 208 QRLHAGFAKRWKEQWEHTNHGWHLYWIIKAPTKMVLQLHEGLQRAWSSVLIQLQ---IGK 264
Query: 454 NRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+ LRS +L + I + C+ L +D AH+++ CP +
Sbjct: 265 SALRS-------FLASVRIEDSPQCECGLGDQDTAHVLIRCPTH 301
>gi|170078313|ref|YP_001734951.1| ribonuclease H [Synechococcus sp. PCC 7002]
gi|169885982|gb|ACA99695.1| ribonuclease H [Synechococcus sp. PCC 7002]
Length = 293
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 13/101 (12%)
Query: 296 EAFAILQALKYVSSIKENE-VIIITDSKSCLEKL---------KNTSKSNGNPSHLILDI 345
E A +QAL++V + E V + TDSK ++ + K + GNP L D+
Sbjct: 52 EMQAAIQALEFVRDCPQPEPVRLFTDSKYVIDGITKWIKGWQKKGWKTATGNPV-LNQDL 110
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG 386
++ L+ L + IS + V+GH+G AGNE D +A ARG
Sbjct: 111 WQQLNQLNQPTIS--WCHVKGHSGEAGNERADAIANGFARG 149
>gi|310287982|ref|YP_003939241.1| ribonuclease H [Bifidobacterium bifidum S17]
gi|309251919|gb|ADO53667.1| ribonuclease H [Bifidobacterium bifidum S17]
Length = 359
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNG------NP---SHLI 342
E A+L+AL+ + ++I TDS+ +C K + K NG P + LI
Sbjct: 55 GELCAVLEALRAHPGAEP--LVIETDSQYAINCSTKWVHGWKKNGWKNSQKKPVKNAALI 112
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
I LS SV+F+WV+GHAG AGNE VD LA+
Sbjct: 113 RAIDAELSRRAG---SVKFVWVKGHAGNAGNEKVDDLAR 148
>gi|358376403|dbj|GAA92959.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 136
Score = 43.9 bits (102), Expect = 0.31, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 289 FATIFTAEAFAILQALKYV----------SSIKENEVIIITDSKSCLEKLKNT-SKSNGN 337
+ +++ AE AI A+ V ++ I++DS S L+ + N+ +KSN
Sbjct: 3 YWSVYAAELLAIYYAIGLVFHLAQKSPAAATTTRGPATILSDSMSALQVIANSWNKSN-- 60
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPY 393
I I ++ L+ I +RF WV G G GN+ RLA+E A G + +P+
Sbjct: 61 -QRNIQAIHQSAGELKPREIPLRFQWVPGPCGDPGNDTAARLAEEAA-GLEKKHPF 114
>gi|451995536|gb|EMD88004.1| hypothetical protein COCHEDRAFT_1111840, partial [Cochliobolus
heterostrophus C5]
Length = 240
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 314 EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGN 373
EV I D+++ + +LK S G L I A LQE I WV GH G+ GN
Sbjct: 58 EVRIYADNQAAILRLKTASDYPGQEWQLRCTI--AAEKLQEKGILPTIQWVPGHQGVIGN 115
Query: 374 EAVDRLAKETAR 385
E D LAKE +
Sbjct: 116 ERADALAKEATK 127
>gi|122913067|gb|ABM68063.1| pol protein [Human immunodeficiency virus 1]
Length = 947
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 275 DTQNKNSGTF----KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKN 330
+T+N +G + K + T A LQA++ E+EV I+TDS+ L ++
Sbjct: 548 ETRNGKAGYVTDRGRQKAVSLTETTNQKAELQAIQLALQDSESEVNIVTDSQYALGIIQ- 606
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
++ + + S L+ I + L + V WV H GI GNE VD+L + R
Sbjct: 607 -AQPDKSESELVSQIIEQLIQKE----MVYLSWVPAHKGIGGNEQVDKLVSDGIR 656
>gi|154270335|ref|XP_001536023.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410037|gb|EDN05425.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 914
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 637 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 696
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 697 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 749
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L PI V VR V + R+ +Y+ + KA
Sbjct: 750 AAPAYGLEATPI-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 808
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 809 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 862
>gi|380095757|emb|CCC05803.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 228
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 290 ATIFTAEAFAILQALKYVSSI-----KENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
A +F AEA +K ++ + I D+ S + L+ T ++ + L
Sbjct: 49 AEVFDAEAEGARHGVKATVALFPEAQARPRITICLDNTSVIRGLRGTPAASSQAAFLD-- 106
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
F+A+ ++ V WV GH GI GNE VD LAK A+G + +N
Sbjct: 107 -FRAIRKGYGPSL-VNVRWVPGHKGITGNEIVDELAKAGAQGGEVVN 151
>gi|342884103|gb|EGU84433.1| hypothetical protein FOXB_05051 [Fusarium oxysporum Fo5176]
Length = 1157
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 81/213 (38%), Gaps = 24/213 (11%)
Query: 289 FATIFTAEAFAILQALKYVSSIKEN-EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFK 347
A +F EA ALK I ++ I D+ S + L + ++ D F
Sbjct: 881 IAEVFDGEAEGARNALKRACQIDAGAQIHICIDNTSVIAGLLGDAPTSSQ------DAFL 934
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL--NP-----YPIPVQDV 400
+ + ++V W GH I GNE DRLAKE GT L NP Y + +
Sbjct: 935 EFQEIAQ-AVAVNVRWAPGHEDIEGNEEADRLAKE---GTKMLMGNPSISATYAAAKRKI 990
Query: 401 RAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNH 460
R D W+E + + L +L T T K P + LR + RS H
Sbjct: 991 RETRDRHFRDWWQEALPRHRSYHAL---DLKTATLKCP--RELSLLRGTLHHLLACRSTH 1045
Query: 461 AICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
Q+Y + N C C + H++ C
Sbjct: 1046 GDFQSYHRRFNHKDATKCT-CGRIKTPEHLVFC 1077
>gi|336117679|ref|YP_004572447.1| ribonuclease HI [Microlunatus phosphovorus NM-1]
gi|334685459|dbj|BAK35044.1| ribonuclease HI [Microlunatus phosphovorus NM-1]
Length = 298
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILDI 345
E A+L L+ + + ++E+++ DS + K KN K +G P + +I
Sbjct: 42 GELTAVLDLLQQTADL-DDELLVYCDSTYVINSITKWMPGWKRKNWRKGDGKPVQNV-EI 99
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
KAL + VRF WV+GHAG NE DRLA A
Sbjct: 100 MKALDAAMQ-GRRVRFEWVKGHAGHELNEEADRLANGAA 137
>gi|415725142|ref|ZP_11470145.1| ribonuclease H [Gardnerella vaginalis 00703C2mash]
gi|388061947|gb|EIK84583.1| ribonuclease H [Gardnerella vaginalis 00703C2mash]
Length = 344
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 358 SVRFIWVRGHAGIAGNEAVDRLAKETAR 385
SV+F+WV+GHAG AGNE VD LA+ A
Sbjct: 124 SVKFVWVKGHAGNAGNEKVDELARTYAE 151
>gi|336273448|ref|XP_003351478.1| hypothetical protein SMAC_00019 [Sordaria macrospora k-hell]
Length = 223
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 290 ATIFTAEAFAILQALKYVSSI-----KENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
A +F AEA +K ++ + I D+ S + L+ T ++ + L
Sbjct: 44 AEVFDAEAEGARHGVKATVALFPEAQARPRITICLDNTSVIRGLRGTPAASSQAAFLD-- 101
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
F+A+ ++ V WV GH GI GNE VD LAK A+G + +N
Sbjct: 102 -FRAIRKGYGPSL-VNVRWVPGHKGITGNEIVDELAKAGAQGGEVVN 146
>gi|154275176|ref|XP_001538439.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414879|gb|EDN10241.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 433
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 156 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 215
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 216 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 268
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 269 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRPTVEYQVKA 327
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 328 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 381
>gi|156030909|ref|XP_001584780.1| hypothetical protein SS1G_14235 [Sclerotinia sclerotiorum 1980]
gi|154700626|gb|EDO00365.1| hypothetical protein SS1G_14235 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 635
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 88/220 (40%), Gaps = 22/220 (10%)
Query: 282 GTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL----KNTSKSNGN 337
G+ L ++ +EA A + LK ++I E I TD CL+ + + SKS G+
Sbjct: 366 GSLPLGRMKEVYDSEAIAAFEGLK--AAISSIESRIATDIYICLDNIEVAARLLSKSTGS 423
Query: 338 PSHLILDIFKALSHLQE-W-NISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPI 395
D F A L W N +V WV GH +AGNEA D+ AK A Y
Sbjct: 424 SQ----DTFSAFRQLASTWHNGTVHIRWVPGHKDVAGNEAADKAAKAGAALPQPTGAY-- 477
Query: 396 PVQDVRAVTDMQHEIQWRENVMSQ--NNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTF 453
+R VT R+ M+Q + Y++L T + ++P R F+
Sbjct: 478 SYAGLRRVTK-----GLRQKAMNQLWSTVIPTTYRDLEIFTSPRNPKELSLP-RPFLGRL 531
Query: 454 NRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
+RS H +Y + L C R+ H C
Sbjct: 532 IAIRSGHGDFASYHERFLHQDAQLLCRCGARKSPVHFFFC 571
>gi|452005484|gb|EMD97940.1| hypothetical protein COCHEDRAFT_1209701 [Cochliobolus
heterostrophus C5]
Length = 231
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 73/179 (40%), Gaps = 14/179 (7%)
Query: 327 KLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG 386
+LK S G L I A LQE I WV GH G+ GNE D LAKE +
Sbjct: 10 RLKTASDYPGQEWQLRCTI--AAEKLQEKGILPTIQWVPGHQGVIGNERADALAKEATKL 67
Query: 387 TDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAK---A 443
+ + + V R E +W + + Q K + N T + W + A
Sbjct: 68 DPSSSRTSLAVIGTR--IKQLGEREWL-SYLGQYRRKAITL-NPTTYAARYKWKTRKQIA 123
Query: 444 IPL--RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLER--EDMAHIILCCPKYQ 498
P R+ F +L+ H + +L K + +C C R +D AHI+L C Y+
Sbjct: 124 TPPTSREASSAFYQLKLGHCYLRDFLFKRGKVDSKVC-PCNYRATQDPAHILLSCTLYK 181
>gi|415721851|ref|ZP_11468784.1| ribonuclease H [Gardnerella vaginalis 00703Bmash]
gi|388060556|gb|EIK83248.1| ribonuclease H [Gardnerella vaginalis 00703Bmash]
Length = 355
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 358 SVRFIWVRGHAGIAGNEAVDRLAKETAR 385
SV+F+WV+GHAG AGNE VD LA+ A
Sbjct: 135 SVKFVWVKGHAGNAGNEKVDELARTYAE 162
>gi|357611795|gb|EHJ67653.1| non-LTR retrotransposon CATS [Danaus plexippus]
Length = 387
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 75/192 (39%), Gaps = 23/192 (11%)
Query: 333 KSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP 392
+ N HL+ I + H S+ F WV+ H GI GNEA + AK A+ A +
Sbjct: 185 QKRSNTHHLVPKIHSTVHHSSG---SIEFAWVKAHVGIVGNEAANTAAKREAKLHKASDY 241
Query: 393 YPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVT 452
P+ ++ T + +Q R + ++ K ++L TI K L T
Sbjct: 242 TQFPITFIKHSTRV---LQSRYDSEPKDKTK----QHLSTIEH----LIKLHSLAHNTFT 290
Query: 453 FNRLRSNHAICQAYLHKINIAPTNLCQ-ECLEREDMAHIILCCPKYQVTLAIALVGSGQD 511
+ + A + Y H + + C + + M H++ CP++ + D
Sbjct: 291 LTQSLTETAYTEQYSHWVKVTEDAGCTCDGTTVQSMGHVLEHCPRF--------IAPRSD 342
Query: 512 ARLVNGGRGFDP 523
+++ G P
Sbjct: 343 HQIICSHAGVSP 354
>gi|154271895|ref|XP_001536800.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408787|gb|EDN04243.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 433
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 156 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 215
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 216 IRGSAAASSNWAY-----NRCHEVLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 268
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 269 VAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGAYGKLSDWYRGWSFSRPTGEYQVKA 327
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 328 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 381
>gi|154277178|ref|XP_001539430.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413015|gb|EDN08398.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 699
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA + QAL K + + E+ ++ + D+ S +
Sbjct: 422 NKQLASFSAALSPMSHVFDAEAVSACQALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 481
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 482 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 534
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 535 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 593
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 594 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 647
>gi|242826860|ref|XP_002488718.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712110|gb|EED11537.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 586
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ----EWNISVRFIWVRGHA 368
+E I TD+++ + + +S+G +++ I + L L+ W VR WV GH
Sbjct: 369 HEATIYTDNQAAIRATCQSERSSGQ--YILRRIVRHLGLLRNNRSRWR--VRLQWVPGHE 424
Query: 369 GIAGNEAVDRLAK-----------ETAR-----GTDALNPYP-----IPVQDVRAVTDMQ 407
G+ GNE D+LAK E AR + P+ IP Q V +
Sbjct: 425 GVPGNEKADQLAKLAAVEATQRTRENARIARINTPNQTTPHAARMSYIPNQSTILVAVCR 484
Query: 408 HEI-----QWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAI 462
+ +W ++ + Y+ + T + + + R + +L++ +
Sbjct: 485 QRLHAGLAKWWKDQWEHAKHGRHRYRIIKEPTKRLLQLHEGL-RRVWSSVLIQLQTGKSA 543
Query: 463 CQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+++L + I + CQ L +D AH+++ CP Y
Sbjct: 544 LRSFLASVRIEDSPQCQCGLGDQDTAHVLVRCPIY 578
>gi|156036352|ref|XP_001586287.1| hypothetical protein SS1G_12865 [Sclerotinia sclerotiorum 1980]
gi|154698270|gb|EDN98008.1| hypothetical protein SS1G_12865 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 562
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 86/216 (39%), Gaps = 14/216 (6%)
Query: 282 GTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
G+ L ++ +EA A + LK ++I E I TD CL+ ++ ++ +
Sbjct: 303 GSLPLGRMKEVYDSEAIAAFEGLK--AAISSIESRIATDIYICLDNIEVAARLLSKSTGS 360
Query: 342 ILDIFKALSHLQE-W-NISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD 399
D F A L W N +V WV GH +AGNEA D+ AK A Y
Sbjct: 361 SQDTFSAFRQLASTWHNGTVHIRWVPGHKDVAGNEAADKAAKAGAALPQPTGAY--SYAG 418
Query: 400 VRAVTDMQHEIQWRENVMSQ--NNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLR 457
+R VT R+ M+Q + Y++L T + ++P R F+ +R
Sbjct: 419 LRRVTK-----GLRQKAMNQLWSTVIPTTYRDLEIFTSPRNPKELSLP-RPFLGRLIAIR 472
Query: 458 SNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
S H +Y + L C R+ H C
Sbjct: 473 SGHGDFASYHERFLHQDAQLLCRCGARKSPVHFFFC 508
>gi|322702335|gb|EFY94003.1| putative reverse transcriptase [Metarhizium anisopliae ARSEF 23]
Length = 695
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 290 ATIFTAEAFAILQALKYVSSIKEN--EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFK 347
A +F AE L LK + ++ + I++ CL+ + G PS +F
Sbjct: 199 AEVFDAEVRGALDGLKAALRLPQSASQKIVV-----CLDNIAAAGCLRGQPSDSSQGVFL 253
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYP 394
A L + + W+ GH+ IAGNE D LAK + +N P
Sbjct: 254 AFQALAKRHRQTDIRWIPGHSNIAGNEQADVLAKVGCTHPEPMNAAP 300
>gi|406027855|ref|YP_006726687.1| Ribonuclease HI [Lactobacillus buchneri CD034]
gi|405126344|gb|AFS01105.1| Ribonuclease HI [Lactobacillus buchneri CD034]
Length = 303
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 260 AGYCKVSIRESLWIFDTQNKNSGTFKLKN--FATIFTAEAFAILQALKYV--SSIKENEV 315
G+ K S + + W F Q + F+ AT E A L+ALKY+ ++ +
Sbjct: 95 GGHVKASDK-AAWAFLVQTGSQKYFESGGEFGATNNRMEIMAFLEALKYLKRQGLQNERI 153
Query: 316 IIITDSKSCLE----------KLKNTSKSNGNPSHLILDIFKAL-SHLQEWNISVRFIWV 364
++ DS+ L+ + + +KS+G+ H +++A+ ++L+++ I +R+ W
Sbjct: 154 GVVMDSQYVLDAIQKGWLAGWRRRGWNKSDGSKLH-NKQLWQAVDANLRDFPI-IRYYWT 211
Query: 365 RGHAGIAGNEAVDRLAKETARGTDALNPYPIPV 397
+GHAG GN VD L +T +P P
Sbjct: 212 KGHAGDEGNVFVDHLLNQTMDQMGQPDPQASPA 244
>gi|312141706|ref|YP_004009042.1| ribonuclease h [Rhodococcus equi 103S]
gi|311891045|emb|CBH50364.1| putative ribonuclease H [Rhodococcus equi 103S]
Length = 184
Score = 43.5 bits (101), Expect = 0.39, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPS---HLI 342
AE +A+++A+ V+ ++I +DS+ ++ K K ++G P L+
Sbjct: 42 AELWALVEAI--VAHPGPEPLLIESDSQYAIKCASEWLPGWKRKGWKTASGGPVKNLELV 99
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG 386
DI +A++ E + VRF WVRGH G NE D+LA E AR
Sbjct: 100 QDIDRAIT---ERSGPVRFRWVRGHVGNHFNEIADKLAGEAARA 140
>gi|325673034|ref|ZP_08152728.1| ribonuclease H [Rhodococcus equi ATCC 33707]
gi|325556287|gb|EGD25955.1| ribonuclease H [Rhodococcus equi ATCC 33707]
Length = 184
Score = 43.5 bits (101), Expect = 0.39, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPS---HLI 342
AE +A+++A+ V+ ++I +DS+ ++ K K ++G P L+
Sbjct: 42 AELWALVEAI--VAHPGPEPLLIESDSQYAIKCASEWLPGWKRKGWKTASGGPVKNLELV 99
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG 386
DI +A++ E + VRF WVRGH G NE D+LA E AR
Sbjct: 100 QDIDRAIT---ERSGPVRFRWVRGHVGNHFNEIADKLAGEAARA 140
>gi|403297220|ref|XP_003939475.1| PREDICTED: ribonuclease H1 [Saimiri boliviensis boliviensis]
Length = 284
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSN 335
+L T AE A +A++ + N++++ TDS + + KN K++
Sbjct: 172 IRLPGRQTNQRAEIHAACKAIEQAKAQNINKLVLYTDSMFTINGITNWVQGWKKNGWKTS 231
Query: 336 GNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ + F AL L + + ++++ V GH+G GNE DRLA+E AR ++
Sbjct: 232 TGKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFTGNEEADRLAREGARQSE 283
>gi|331232154|ref|XP_003328739.1| hypothetical protein PGTG_10040 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 407
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 68/181 (37%), Gaps = 23/181 (12%)
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNE 374
V I+TD+K +++ KN +L +I L Q +I + +W GH GI GNE
Sbjct: 199 VYILTDNKGVIQRTKNFGVPKPG-QYLFFEILHLLEFTQR-DIDLFLVWCPGHKGITGNE 256
Query: 375 AVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTIT 434
D LA T + N P D R ++ I+ Q K L + I+
Sbjct: 257 IADNLAA----ATTSRNKTP----DRRLKGNLSKAIRTFSAEFHQTPPKSLQSR----IS 304
Query: 435 DKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
D + I N+L S + +L K +C C RE H C
Sbjct: 305 DMPISHSSLI---------NQLSSGASPLHQHLFKAKRRMDPICPFCPGRETTIHFFDFC 355
Query: 495 P 495
P
Sbjct: 356 P 356
>gi|260829299|ref|XP_002609599.1| hypothetical protein BRAFLDRAFT_125021 [Branchiostoma floridae]
gi|229294961|gb|EEN65609.1| hypothetical protein BRAFLDRAFT_125021 [Branchiostoma floridae]
Length = 203
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 20/128 (15%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSK-SN 335
KL T AE A A++ + ++ + TDS+ + + KN K S
Sbjct: 85 KLPGRQTNNRAEIHAARYAIESAKEMGLAKISLHTDSQFLINGITKWIHGWKKNGWKLST 144
Query: 336 GNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPI 395
G P D S LQ I V+++ VRGH G+ GNEA D LAKE +R +
Sbjct: 145 GKPVQNKEDFQSLDSALQ--GIDVQWVHVRGHVGVPGNEAADGLAKEGSRKS-------- 194
Query: 396 PVQDVRAV 403
++DVRA+
Sbjct: 195 -LEDVRAL 201
>gi|270284446|ref|ZP_05966122.2| ribonuclease H [Bifidobacterium gallicum DSM 20093]
gi|270276890|gb|EFA22744.1| ribonuclease H [Bifidobacterium gallicum DSM 20093]
Length = 409
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNG--NPSHLIL---DIF 346
E A+LQAL+ + +II TDS+ +C K + K NG N + +
Sbjct: 84 GELCAVLQALR--AHPGSEPLIIETDSQYAINCSTKWVHGWKKNGWKNSKKEPVKNAPLI 141
Query: 347 KAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
KA+ + L++ SV F+WV+GHAG GNE VD LA+
Sbjct: 142 KAIDAELRDRAGSVTFVWVKGHAGNEGNEKVDLLAR 177
>gi|9828660|gb|AAB47724.2| Pol protein [Simian immunodeficiency virus]
Length = 1014
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AIL AL+ + V I+TDS+ L L+ T + +P L+ +I + L ++
Sbjct: 643 AELQAILMALEDSTG----PVNIVTDSQYALGVLQGTPDQSESP--LVEEIIQKLIKREQ 696
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+S WV H GI GNE VD+L + R
Sbjct: 697 IYLS----WVPAHKGIGGNEQVDKLVSQGIR 723
>gi|66863088|emb|CAI96667.1| putative reverse transcriptase [Culex pipiens]
gi|66863090|emb|CAI96668.1| putative reverse transcriptase [Culex pipiens]
Length = 134
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 44 NDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHE-- 101
NDNNI+ EQ G +G L + KII ++ K + K+ ++A +D+ KA+DN H+
Sbjct: 28 NDNNIILNEQFGFRKGHNTAHQLTRVTKIIKQN-KLESKSTAMALLDVEKAFDNVWHDGL 86
Query: 102 -----------WMVKVIQMYKIDLKSATFCVFC 123
+++K+IQ Y L +F VF
Sbjct: 87 IHKLYLYGFPMYLIKIIQHY---LSERSFRVFL 116
>gi|444920566|ref|ZP_21240407.1| Hypothetical protein F387_01154 [Wohlfahrtiimonas chitiniclastica
SH04]
gi|444508385|gb|ELV08556.1| Hypothetical protein F387_01154 [Wohlfahrtiimonas chitiniclastica
SH04]
Length = 227
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKA-LSHLQE 354
E F L+AL + SS + I D L+NT K DI K ++ L +
Sbjct: 141 EVFGALEALNWASSHGYKAITIYHD-------LQNTGKWARGEYQAHADISKLFMAELAK 193
Query: 355 WN--ISVRFIWVRGHAGIAGNEAVDRLA 380
+ + + F+WV+GHAGI NE D+LA
Sbjct: 194 YKEILDIEFVWVKGHAGIEYNEKADQLA 221
>gi|306823522|ref|ZP_07456897.1| ribonuclease H [Bifidobacterium dentium ATCC 27679]
gi|309802938|ref|ZP_07697039.1| ribonuclease HI [Bifidobacterium dentium JCVIHMP022]
gi|304553229|gb|EFM41141.1| ribonuclease H [Bifidobacterium dentium ATCC 27679]
gi|308220405|gb|EFO76716.1| ribonuclease HI [Bifidobacterium dentium JCVIHMP022]
Length = 400
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNG------NPSHLILDI 345
E A+L+AL+ + ++I TDS+ +C K + K NG P I
Sbjct: 55 GELCAVLEALR--AHPGSEPLVIETDSQYAINCSTKWVHGWKKNGWKNSQKKPVKNAALI 112
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
+ + + V+F+WV+GHAG AGNE VD LA+
Sbjct: 113 KAIDAEISQRPGPVKFVWVKGHAGNAGNEKVDELAR 148
>gi|171741225|ref|ZP_02917032.1| hypothetical protein BIFDEN_00299 [Bifidobacterium dentium ATCC
27678]
gi|283455412|ref|YP_003359976.1| ribonuclease H [Bifidobacterium dentium Bd1]
gi|171276839|gb|EDT44500.1| ribonuclease HI [Bifidobacterium dentium ATCC 27678]
gi|283102046|gb|ADB09152.1| rnh Ribonuclease H [Bifidobacterium dentium Bd1]
Length = 400
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNG------NPSHLILDI 345
E A+L+AL+ + ++I TDS+ +C K + K NG P I
Sbjct: 55 GELCAVLEALR--AHPGSEPLVIETDSQYAINCSTKWVHGWKKNGWKNSQKKPVKNAALI 112
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
+ + + V+F+WV+GHAG AGNE VD LA+
Sbjct: 113 KAIDAEISQRPGPVKFVWVKGHAGNAGNEKVDELAR 148
>gi|334312524|ref|XP_001381337.2| PREDICTED: ribonuclease H1-like [Monodelphis domestica]
Length = 342
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNGNPSHLILDIF 346
AE A +A++ + N++++ TDS + + KN K++ + + F
Sbjct: 239 AEIHAACKAIEQAKNQNINKLVLYTDSMFTINGITSWIKDWKKNGWKTSTGKEVINKEDF 298
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
L L + I +++I V GH+G AGNE DRLA+E A+ + L
Sbjct: 299 VKLDTLTQ-GIDIKWIHVPGHSGFAGNEEADRLAREGAKKSQEL 341
>gi|154269949|ref|XP_001535860.1| hypothetical protein HCAG_09207 [Ajellomyces capsulatus NAm1]
gi|150414478|gb|EDN09841.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 406
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 129 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 188
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 189 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 241
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V +R V + R+ +Y+ + KA
Sbjct: 242 AAPAYGLEATPT-VSGIRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 300
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 301 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 354
>gi|336270186|ref|XP_003349852.1| hypothetical protein SMAC_00741 [Sordaria macrospora k-hell]
gi|380095241|emb|CCC06714.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 657
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 273 IFDTQNK-NSGTFKLKNFATIFTAEAFAILQALKYVSSI-----KENEVIIITDSKSCLE 326
IF Q + G +L+ A +F AEA K ++ + I D+ S +
Sbjct: 318 IFQGQTELGRGCGQLEQ-AEVFDAEAEGARHGHKAAVALLPEAQARPRITICLDNTSVIR 376
Query: 327 KLKNTSKSNGNPSHLILDIFKALSHLQEWNIS-VRFIWVRGHAGIAGNEAVDRLAKETAR 385
L+ T ++ + LD F+A+ + + S V F WV GH GI GNE D LAK A
Sbjct: 377 GLRETPAASSQAA--FLD-FRAIR--KSYGPSLVDFRWVPGHKGITGNEIADELAKAGAE 431
Query: 386 GTDALN 391
G + +N
Sbjct: 432 GGEVVN 437
>gi|27311168|ref|NP_758887.1| pol protein [Simian immunodeficiency virus SIV-mnd 2]
gi|26557008|gb|AAM08706.2|AF367411_2 pol protein [Simian immunodeficiency virus SIV-mnd 2]
Length = 1010
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 256 KEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEV 315
KE +AGY T S L+N T A L+A+K +V
Sbjct: 618 KEGKAGYV------------TARNKSRVIALEN-----TTNQKAELEAIKMALQDSGPKV 660
Query: 316 IIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEA 375
I+TDS+ + L + NP ++ +I + + H + +V WV H GI GNE
Sbjct: 661 NIVTDSQYAMGILSAAPDQSDNP--IVREIIELMIHKE----AVYLAWVPAHKGIGGNEQ 714
Query: 376 VDRLAKETAR 385
VD+L R
Sbjct: 715 VDKLVSRGVR 724
>gi|154271472|ref|XP_001536589.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409259|gb|EDN04709.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1184
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + + IF AEA +AL K + + E+ ++ + D+ S +
Sbjct: 907 NKQLASFSAALSSMSHIFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 966
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 967 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 1019
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 1020 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRPTVEYQVKA 1078
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1079 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1132
>gi|119496353|ref|XP_001264950.1| RNase H domain protein [Neosartorya fischeri NRRL 181]
gi|119413112|gb|EAW23053.1| RNase H domain protein [Neosartorya fischeri NRRL 181]
Length = 412
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNP---SHLI 342
AE AIL+AL + +V I TDS+ ++ + N ++ P LI
Sbjct: 287 AELTAILRALDIAP--RHRDVTIFTDSRYAIDCVTVWFVKWRKNNWLTADQKPVENKDLI 344
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + E + F WV+GH GNEA DRLA AR
Sbjct: 345 ESILVKIEERNELKVKTLFEWVKGHNRDPGNEAADRLAVSGAR 387
>gi|154274337|ref|XP_001538020.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415628|gb|EDN10981.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1128
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 851 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 910
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK A T
Sbjct: 911 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAASST 963
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 964 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 1022
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1023 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1076
>gi|7508572|pir||T25352 hypothetical protein T27C5.9 - Caenorhabditis elegans
Length = 1638
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 47 NILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVKV 106
N+L QRG E GC + L + + + K K +NL+VAW+DL A+ + PHE +
Sbjct: 958 NVLSKCQRGFQE-REGCNESLAILRTAIDVAKGKRRNLAVAWLDLTNAFGSIPHELIEYA 1016
Query: 107 IQMY 110
+ Y
Sbjct: 1017 LTAY 1020
>gi|153004605|ref|YP_001378930.1| ribonuclease H [Anaeromyxobacter sp. Fw109-5]
gi|187611389|sp|A7HB50.1|RNH_ANADF RecName: Full=Ribonuclease H; Short=RNase H
gi|152028178|gb|ABS25946.1| ribonuclease H [Anaeromyxobacter sp. Fw109-5]
Length = 175
Score = 43.1 bits (100), Expect = 0.53, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 25/125 (20%)
Query: 272 WIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVI-IITDSKSCLEKL-- 328
W+ D GT+ + N E A+L+AL + E E + +++DS+ ++ L
Sbjct: 46 WVTD------GTYAVTNNRM----ELRAVLEAL---DGLPEGEAVDVVSDSRYVVDALSK 92
Query: 329 -------KNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
K + G P L D+ +AL + + VR+ WVRGH G NE VD LA+
Sbjct: 93 WIHGWRKKGWRTAAGEPV-LNRDLIEALD-ARGRELRVRYSWVRGHDGHPVNEVVDALAQ 150
Query: 382 ETARG 386
ARG
Sbjct: 151 SAARG 155
>gi|226290451|gb|EEH45935.1| ribonuclease H1 [Paracoccidioides brasiliensis Pb18]
Length = 419
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE------------KLKNTSKSNGNPSHLI 342
AE AI++AL + +V I TDSK + K + LI
Sbjct: 287 AELTAIIRALDIAP--RHRDVTIFTDSKYAINCVTVWFVNWQRNKWMTSEDKPVENKDLI 344
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + + N+ F WVRGH GNEA DRLA AR
Sbjct: 345 QSILEKIQERAVLNVKTLFEWVRGHNRDPGNEAADRLAVNGAR 387
>gi|50540386|ref|NP_001002659.1| ribonuclease H1 [Danio rerio]
gi|49900309|gb|AAH76457.1| Ribonuclease H1 [Danio rerio]
gi|182891492|gb|AAI64625.1| Rnaseh1 protein [Danio rerio]
Length = 276
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKN---TSKSNG---NP 338
+L T AE A +AL+ + +V++ TDSK + + + T KSNG
Sbjct: 165 RLPGRQTNQRAELQAACKALEQAKEMNFKKVVLYTDSKFTINGVTSWVKTWKSNGWRLKS 224
Query: 339 SHLIL--DIFKALSHLQEWNISVRFIW--VRGHAGIAGNEAVDRLAKETA 384
+I+ D F+ L L N + +W + GHAG GNE DRL++E A
Sbjct: 225 GGVIINKDDFQQLDKL---NAELDVVWMHIPGHAGYTGNEEADRLSREGA 271
>gi|322782100|gb|EFZ10335.1| hypothetical protein SINV_09428 [Solenopsis invicta]
Length = 225
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 356 NISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP-YPIPVQDVRA 402
N+ V +W+ H GIAGNE D AKE +R L P + IP D+ A
Sbjct: 3 NLKVTLVWIPAHVGIAGNEKADETAKEASRS--GLKPRFKIPHTDLFA 48
>gi|4324808|gb|AAD17072.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 1437
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L +EW V
Sbjct: 1068 LQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIQ-KEW---VY 1121
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L + R
Sbjct: 1122 LSWVPAHKGIGGNEQVDKLVSQGIR 1146
>gi|258569833|ref|XP_002543720.1| ribonuclease H [Uncinocarpus reesii 1704]
gi|237903990|gb|EEP78391.1| ribonuclease H [Uncinocarpus reesii 1704]
Length = 418
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 97/255 (38%), Gaps = 37/255 (14%)
Query: 161 DPGKGSGNATQDDGDQYESAPEYAKQNCFLNEVKDKWPNAYLIFTDGSKTS--------E 212
+PG G+G D+ SAP +E + +P G++
Sbjct: 151 EPGDGAGGNESSKKDKTPSAPPGMMAEPLRDEAGNVYPAGTGPLPPGAEDGFDPNVLLNP 210
Query: 213 SVASAFYDTQNKNSGTFKLQNFATIFTAEAFAILQALKYASSIKEKEAGYCKVSIRESLW 272
S Y T + + T KLQ + +L S++ G K+ + +
Sbjct: 211 STGRLVYKTAEQKAAT-KLQPKQSTLGN----MLNIYTDGSAL-----GNGKLRAKAGVG 260
Query: 273 I-FDTQNKNSGTFKLK-NFATIFTAEAFAILQALKYVSSIKENEVIIITDSKS------- 323
+ F ++ + + LK N T AE AI +AL + +V I TDSK
Sbjct: 261 VYFGPGDERNVSEPLKGNRQTNQRAELTAISRALDIAP--RHRDVTIYTDSKYSIDCVTV 318
Query: 324 -CLEKLKNT-----SKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVD 377
C+ +N SK N LI I + N+ F WV+GH GNEA D
Sbjct: 319 WCIRWQRNKWMTADSKPVEN-KDLIQSILTKIEERTSLNVKTLFEWVKGHNKHPGNEAAD 377
Query: 378 RLAKETAR-GTDALN 391
RLA AR G A+N
Sbjct: 378 RLAVRGARVGLQAIN 392
>gi|451946759|ref|YP_007467354.1| ribonuclease HI [Desulfocapsa sulfexigens DSM 10523]
gi|451906107|gb|AGF77701.1| ribonuclease HI [Desulfocapsa sulfexigens DSM 10523]
Length = 228
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLEKL----------KNTSKSNGNPSHLILDI 345
E A ++ ++ + S E +V + +DS+ + + +N KS+GNP+ + D+
Sbjct: 120 ELMACIKGIEALPSSSE-KVALFSDSQYVVNGISKGWAKAWRKRNWLKSDGNPA-VNADL 177
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ L L E I + F WV+GHAG NE D+LA ++A+G +
Sbjct: 178 WARLLDLTE-GIDIVFNWVKGHAGHPLNERCDQLAVQSAKGEN 219
>gi|54696206|gb|AAV38475.1| ribonuclease H1 [synthetic construct]
gi|61366338|gb|AAX42845.1| ribonuclease H1 pseudogene 1 [synthetic construct]
Length = 287
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNG 336
+L T AE A +A++ + N++++ TDS + + KN K++
Sbjct: 175 RLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTINGITNWVQGWKKNGWKTSA 234
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
+ + F AL L + + ++++ V GH+G GNE DRLA+E A+ ++ L
Sbjct: 235 GKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREGAKQSEDL 287
>gi|392551909|ref|ZP_10299046.1| ribonuclease H [Pseudoalteromonas spongiae UST010723-006]
Length = 156
Score = 42.7 bits (99), Expect = 0.57, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 291 TIFTAEAFAILQALKYVSSIKEN-EVIIITDSKSCLEKL------------KNTSKSNGN 337
T+ T +L A+ + S+KE +VI+ TDS+ + + K SK +
Sbjct: 40 TLTTNNRMELLAAIIGLESLKEPCQVILTTDSQYVKQGIESWLANWKKRGWKTASKQDVK 99
Query: 338 PSHLILDIFKALS-HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
L + A S H EW WV+GHAG A NE VD LA+E A +D L
Sbjct: 100 NKDLWQRLDAANSKHHVEWR------WVKGHAGHAENERVDDLAREAAESSDLL 147
>gi|238508578|ref|XP_002385478.1| reverse transcriptase, putative [Aspergillus flavus NRRL3357]
gi|220688370|gb|EED44723.1| reverse transcriptase, putative [Aspergillus flavus NRRL3357]
Length = 1312
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 91/221 (41%), Gaps = 13/221 (5%)
Query: 279 KNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNP 338
K + T + +T++ E I AL + + + DS++ ++ ++N + +G
Sbjct: 1037 KRNRTLGTEEESTVYAGELTGIRMALHRLRK-ETRPATVFVDSEAAIQAVQNPRRPSGQ- 1094
Query: 339 SHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE-TARGTDALNPYPIPV 397
ILD + V+ W+ H G+ GNEA D A+E T + +A+
Sbjct: 1095 --YILDQIYYIVRRYNMQGRVQIRWIPAHIGVPGNEAADEAAREGTQKAGEAICLAAAAK 1152
Query: 398 QDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPW-FAKAIPLRKFIVTFNRL 456
+ +R + +W+ + +K L I +K+ K +P + ++
Sbjct: 1153 RQIRRRIKDRWTREWKAEKTGRTTHK------LVEIPNKRVLDLYKGLP-KPHASIIIQM 1205
Query: 457 RSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
R+ + +L KI ++ ++ + HI+L CP +
Sbjct: 1206 RTQRNGLKHFLFKIKVSDSDQYHCGQGSQTSRHILLQCPLF 1246
>gi|156034883|ref|XP_001585860.1| hypothetical protein SS1G_13377 [Sclerotinia sclerotiorum 1980]
gi|154698780|gb|EDN98518.1| hypothetical protein SS1G_13377 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 362
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 23/148 (15%)
Query: 363 WVRGHAGIAGNEAVDRLAKE--TARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMS-- 418
WV GH + GNE D+LAKE T + T + + V+ QW + +
Sbjct: 141 WVPGHTSVEGNELADKLAKEATTIQPTSNETSFGLLGMTVKEYASD----QWLDTLKQYE 196
Query: 419 -QNNNKGLFYKNLFTITDKKPW-FAKAIPL-----RKFIVTFNRLRSNHAICQAYLHKIN 471
++N Y LF PW I L R F +L+ H ++YLH+
Sbjct: 197 LRSNQSPSTYSKLF------PWKIGSKIKLPSGTTRNTASAFFQLKLGHGYIKSYLHRFK 250
Query: 472 IAPTNLCQECLEREDMAHIILCCPKYQV 499
+ N C C E H+++ CP Y+
Sbjct: 251 LT-NNKCI-CSNIEAPQHLLISCPIYKT 276
>gi|400822|sp|P31822.1|POL_FIVT2 RecName: Full=Pol polyprotein; Contains: RecName: Full=Protease;
AltName: Full=Retropepsin; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; Short=RT;
AltName: Full=Exoribonuclease H; Contains: RecName:
Full=Deoxyuridine 5'-triphosphate nucleotidohydrolase;
Short=dUTPase; Contains: RecName: Full=Integrase;
Short=IN
gi|323950|gb|AAA43071.1| pol polyprotein, partial [Feline immunodeficiency virus]
Length = 1124
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE A+L ALK S E+ IITDS+ L L N P L+ +++ + E
Sbjct: 632 AEVQALLLALKAGSE----EMNIITDSQYILNIL------NQQPD-LMEGLWQEVLEQME 680
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRL 379
I++ WV GH GI GNE VD+L
Sbjct: 681 KKIAIFIDWVPGHKGIPGNEEVDKL 705
>gi|396489340|ref|XP_003843080.1| hypothetical protein LEMA_P088400.1 [Leptosphaeria maculans JN3]
gi|312219658|emb|CBX99601.1| hypothetical protein LEMA_P088400.1 [Leptosphaeria maculans JN3]
Length = 325
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 16/153 (10%)
Query: 287 KNFATIFTAEAFAILQALKYVSSIKENE-----VIIITDSKSCLEKLKNTSKSNGNPS-- 339
K+ AE F + AL+ + + V I +D + LE L++ + P+
Sbjct: 121 KDTGDSMDAEVFGLAAALRLAQDTADEKPWLRVVRIFSDGRRVLEGLRDGYIRSLGPAVS 180
Query: 340 --HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE----TARGTDA---L 390
+ ++ L I+V +WV+GHAG GN D A+ AR + +
Sbjct: 181 SPWALTQVYNVTRALVRRGITVELVWVKGHAGSEGNYRADLAARNGWSMEARQVEEKGWV 240
Query: 391 NPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNK 423
+P Q + +D + E WR N + K
Sbjct: 241 KMSKVPAQVAQMGSDAREEWYWRVNKAGLRDGK 273
>gi|70991232|ref|XP_750465.1| ribonuclease H [Aspergillus fumigatus Af293]
gi|66848097|gb|EAL88427.1| ribonuclease H, putative [Aspergillus fumigatus Af293]
gi|159130938|gb|EDP56051.1| ribonuclease H, putative [Aspergillus fumigatus A1163]
Length = 410
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNP---SHLI 342
AE AIL+AL + +V I TDS+ ++ + N ++ P LI
Sbjct: 285 AELTAILRALDIAP--RHRDVTIFTDSRYAIDCVTVWFVKWRKNNWLTADQKPVENKDLI 342
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + E + F WV+GH GNEA DRLA AR
Sbjct: 343 ESILVKIEERNELKVKTLFEWVKGHNRDPGNEAADRLAVSGAR 385
>gi|61372889|gb|AAX43931.1| ribonuclease H1 [synthetic construct]
Length = 287
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNG 336
+L T AE A +A++ + N++++ TDS + + KN K++
Sbjct: 175 RLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTINGITNWVQGWKKNGWKTSA 234
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
+ + F AL L + + ++++ V GH+G GNE DRLA+E A+ ++ L
Sbjct: 235 GKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREGAKQSEDL 287
>gi|162449310|ref|YP_001611677.1| ribonuclease H [Sorangium cellulosum So ce56]
gi|161159892|emb|CAN91197.1| Ribonuclease H [Sorangium cellulosum So ce56]
Length = 250
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
AT AE AIL++L+ V ++I TDS+ + L+ K+ N + LI + AL
Sbjct: 148 ATNNIAELTAILRSLEEVDE-PGRPIVIHTDSQYSIGVLQKGWKAKAN-TELIASLRGAL 205
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ R ++V GHAG+ NE D LA+E R
Sbjct: 206 AARPR----ARLVYVPGHAGVLLNERADALAREAVR 237
>gi|326472277|gb|EGD96286.1| RNase H domain-containing protein [Trichophyton tonsurans CBS
112818]
gi|326483333|gb|EGE07343.1| hypothetical protein TEQG_08753 [Trichophyton equinum CBS 127.97]
Length = 381
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 92/257 (35%), Gaps = 47/257 (18%)
Query: 143 EDITMSGDCPRDKRGIPPDPGKGSGNATQDDGDQYESAPEYAKQNCFLNEVKDKW-PNAY 201
E +G P +K +P PG GN + GD+Y A +D + PN
Sbjct: 124 EAFVRNGQTPSNKDSLPGAPGLMEGNPKDNAGDEY-----AAGTGPLPPGAEDGFDPNIL 178
Query: 202 LIFTDGS---KTSESVASAFYDTQNKNSGTFKLQNFATIFTAEAFAILQALKYASSIKEK 258
L T G KT E Q K SG + T +A QA
Sbjct: 179 LDPTTGKIVYKTPEQKQE--RKIQPKPSGPPGMLKIYTDGSALRNGTSQA---------- 226
Query: 259 EAGYCKVSIRESLWIF---DTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEV 315
R + ++ D +++N + T AE AI +AL K +V
Sbjct: 227 ---------RAGVGVYFGPDDESRNVSEPLAGSRQTNQRAELTAISRALDIAP--KHRDV 275
Query: 316 IIITDSKSCLE---------KLKNTSKSNGNP---SHLILDIFKALSHLQEWNISVRFIW 363
I TDSK ++ + N S P LI I + + + F W
Sbjct: 276 TIFTDSKYSIDCVTVWCINWQRNNWVTSTQKPVENKDLIQAILSKIEERKSLKVKTLFEW 335
Query: 364 VRGHAGIAGNEAVDRLA 380
V+GH AGNEA DRLA
Sbjct: 336 VKGHNKDAGNEAADRLA 352
>gi|2708267|gb|AAB92394.1| putative reverse transcriptase [Drosophila subobscura]
Length = 675
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKENE--VIIITDSKSCLEKLKNTSKSNGNP 338
S +F+L + ++F AE AI +AL + + + I +DS++ ++ L + S+
Sbjct: 420 SYSFRLPDHCSVFQAEVIAIKEALSCLQELTPEATYINIYSDSQAAIKSLNAITTSSAT- 478
Query: 339 SHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
+ + K+L H + + IWV GH I GN D LA+
Sbjct: 479 ---VANCRKSL-HEMAYQFVISLIWVPGHQDIEGNCIADELAR 517
>gi|452986031|gb|EME85787.1| hypothetical protein MYCFIDRAFT_118885, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 351
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE------------KLKNTSKSNGNPSHLI 342
AE AI++AL+ K+ ++I++DSK ++ N+S+ LI
Sbjct: 243 AELTAIVRALEVAP--KDRRIVIVSDSKYAIDCVTEWFPNWQRNGWVNSSRKPVENKDLI 300
Query: 343 LDIFKALSHLQEWNIS--------VRFIWVRGHAGIAGNEAVDRLAKETAR 385
I L N S VRF WV+GHA GN A D LA AR
Sbjct: 301 QKILDMLGERLRLNASYWDHGPGGVRFEWVKGHAKDEGNNAADELATAGAR 351
>gi|6635955|gb|AAF20019.1|AF134900_2 pol-like protein [Aedes aegypti]
Length = 1208
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 25/216 (11%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
++L + ++F+AEA AIL A ++ + +I+DS S L + ++S H +
Sbjct: 978 YRLPDQCSVFSAEAAAILLA---STTPAPKPICVISDSASVLATINSSSTR-----HPWI 1029
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAV 403
+ S Q F+WV GH GI GN D LA + G L P D++
Sbjct: 1030 QAVQKNSPSQ-----TVFLWVPGHCGIRGNVEADHLASKGRSGR--LFTRLTPGMDLKNW 1082
Query: 404 TDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAIC 463
T Q W + N + F + + T K W R+ +RLR+ H
Sbjct: 1083 TKSQIRSSW---ALEWVNLRDKFIRKIKGET--KRWIDTNN--RRDQQVLSRLRTGH--T 1133
Query: 464 QAYLHKINIAP-TNLCQECLEREDMAHIILCCPKYQ 498
A + N P C C + H+I+ CP +Q
Sbjct: 1134 HATHNMGNERPFRKKCIVCNTTMSVEHMIINCPCFQ 1169
>gi|154273178|ref|XP_001537441.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415953|gb|EDN11297.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 529
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 252 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 311
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 312 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 364
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 365 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 423
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 424 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 477
>gi|434399915|ref|YP_007133919.1| Ribonuclease H [Stanieria cyanosphaera PCC 7437]
gi|428271012|gb|AFZ36953.1| Ribonuclease H [Stanieria cyanosphaera PCC 7437]
Length = 157
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 27/135 (20%)
Query: 273 IFDTQNKN-SGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK-- 329
I++ K SG ++L + A A L +LK+ + V + +DSK ++ +K
Sbjct: 30 IYNQHRKEISGGYRLTTNNRMEMMAAIAALTSLKHKCA-----VTLHSDSKYLVDAMKLG 84
Query: 330 ------------NTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVD 377
N + NP D+++ L L +++ V F+WV+GHAGI NE D
Sbjct: 85 WAKKWQANGWMRNKKEKAKNP-----DLWQQLLDLCQYH-QVDFVWVKGHAGIPENELCD 138
Query: 378 RLAKETARGTDALNP 392
RLA A G L P
Sbjct: 139 RLAVAAA-GESNLPP 152
>gi|154281309|ref|XP_001541467.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411646|gb|EDN07034.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1683
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 1406 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 1465
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 1466 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 1518
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L PI V VR V + R+ +Y+ + KA
Sbjct: 1519 AAPAYGLEATPI-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 1577
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1578 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1631
>gi|441469132|gb|AGC37027.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 999
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
T A LQA++ +EV I+TDS+ LE ++ ++ + + S L+ I + L + +
Sbjct: 623 TTNQKAELQAIQLALQDSGSEVNIVTDSQYVLEIIQ--AQPDKSESELVNQIIEQLINKE 680
Query: 354 EWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
+S WV H G+ GNE VD+L + R LN
Sbjct: 681 RIYLS----WVPAHKGVGGNEQVDKLVSKGIRKVLFLN 714
>gi|46401827|ref|YP_006919.1| putative RNaseH ribonuclease [Enterobacteria phage T5]
gi|45775005|gb|AAS77137.1| putative RNaseH ribonuclease [Enterobacteria phage T5]
Length = 158
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTA----EAFAILQALKYVSSIKENEVI 316
G CK + W F + N K+ + T E AI++AL++ ++
Sbjct: 10 GACKSNPGPGAWGFIVYDDNDDRLGSKSGYSPKTTNNEMELTAIVEALRWSVKKDNRPIV 69
Query: 317 IITDSKSCLEKL---------KNTSKSNGN-PSHLIL--DIFK-ALSHLQEWNISVRFIW 363
I TDS C + K K++G P +L L + FK ++ N + FI
Sbjct: 70 IYTDSAYCKNGMESWMFSWQRKGWKKADGEVPLNLELWQEAFKLTQQYINFHNTNPTFIK 129
Query: 364 VRGHAGIAGNEAVDRL 379
V+GH+GI+GNEAVD L
Sbjct: 130 VKGHSGISGNEAVDAL 145
>gi|154287174|ref|XP_001544382.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408023|gb|EDN03564.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 433
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 32/237 (13%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 156 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 215
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 216 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 268
Query: 388 DA----LNPYPIPVQDVRAVT---DMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWF 440
A L P V VR V + +W + ++ +Y+ +
Sbjct: 269 AAPAYGLEATPT-VSGVRTVAKQLSQEARQKWWSGACGKLSD---WYRGWSFSRPTVEYQ 324
Query: 441 AKAIP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
KA P R + + LRS+H Y + A L C + H++LC
Sbjct: 325 VKAPPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 381
>gi|193788502|dbj|BAG53396.1| unnamed protein product [Homo sapiens]
Length = 169
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSN 335
+L T AE A +A++ + N++++ TDS + + KN K++
Sbjct: 57 IRLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTINGITNWVQGWKKNGWKTS 116
Query: 336 GNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ + F AL L + + ++++ V GH+G GNE DRLA+E A+ ++
Sbjct: 117 AGKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREGAKQSE 168
>gi|302815267|ref|XP_002989315.1| hypothetical protein SELMODRAFT_427944 [Selaginella moellendorffii]
gi|300142893|gb|EFJ09589.1| hypothetical protein SELMODRAFT_427944 [Selaginella moellendorffii]
Length = 911
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 293 FTAEAFAILQALKYVSSI-KENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFK---- 347
T E AIL+ + YV S K+ + + TDS LE L K PS+L +++
Sbjct: 157 MTMELLAILEGIVYVQSFWKQTSIFLYTDS---LESLYLVEKFQRKPSNLRYHVYENILV 213
Query: 348 --ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
A + Q + V+ HA I GNEA DRLA
Sbjct: 214 AIAAAAQQSKVQRIHLFKVKAHANIFGNEAADRLA 248
>gi|319783529|ref|YP_004143005.1| ribonuclease H [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169417|gb|ADV12955.1| Ribonuclease H [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 276
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 283 TFKLKNFATIFTAEAFAILQALKYVSSIKENE-VIIITDSKSCLEKL------------- 328
+F AT T E +L AL +V++ E +I DS+ ++ L
Sbjct: 136 SFGGAATATNNTMELTGLLMALAWVAASAPAEPAVIYCDSQYAVKGLNEWVPGWKAKGWK 195
Query: 329 -KNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
K + S N S L +++A+ ++ ++ WV+GHAG GNE D LA +G
Sbjct: 196 RKGGNASEKNQSIANLALWQAIDRARDELQFIKVKWVKGHAGAVGNERADELA---GQGR 252
Query: 388 DALNPYPI-PVQDVRAVTDMQHEI 410
+ P P+ P+ +R D I
Sbjct: 253 EQAVPAPVSPLDLIRQQLDYSSRI 276
>gi|156042568|ref|XP_001587841.1| hypothetical protein SS1G_11082 [Sclerotinia sclerotiorum 1980]
gi|154695468|gb|EDN95206.1| hypothetical protein SS1G_11082 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1432
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 88/220 (40%), Gaps = 22/220 (10%)
Query: 282 GTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL----KNTSKSNGN 337
G+ L ++ +EA A + LK ++I E I TD CL+ + + SKS G+
Sbjct: 1163 GSLPLGRMKEVYDSEAIAAFEGLK--AAISSIESRIATDIYICLDNIEVAARLLSKSTGS 1220
Query: 338 PSHLILDIFKALSHL-QEW-NISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPI 395
D F A L W N +V WV GH +AGNEA D+ AK A Y
Sbjct: 1221 SQ----DTFSAFRQLASTWHNGTVHIRWVPGHKDVAGNEAADKAAKAGAALPQPTGAY-- 1274
Query: 396 PVQDVRAVTDMQHEIQWRENVMSQ--NNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTF 453
+R VT R+ M+Q + Y++L T + ++P R F+
Sbjct: 1275 SYAGLRRVTK-----GLRQKAMNQLWSTVIPTTYRDLEIFTSPRNPKELSLP-RPFLGRL 1328
Query: 454 NRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
+RS H +Y + L C R+ H C
Sbjct: 1329 IAIRSGHGDFASYHERFLHQDAQLLCRCGARKSPVHFFFC 1368
>gi|83775366|dbj|BAE65488.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1187
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 91/234 (38%), Gaps = 34/234 (14%)
Query: 279 KNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNP 338
K + T + +T++ E I AL + + + DS++ ++ ++N + +G
Sbjct: 917 KRNCTLGTEEESTVYAGELTGIRMALHRLRR-ETRPATVFVDSQAAIQAIQNPRRPSGQ- 974
Query: 339 SHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE--TARGT----DALNP 392
ILD + V+ W+ H G+ GNEA D A+E T GT +A+
Sbjct: 975 --YILDQIYYIIRRYNMQNRVQIHWIPAHIGVPGNEAADEAAREGATREGTQQTGEAICL 1032
Query: 393 YPIPVQDVRAVTDMQHEIQWRE--------NVMSQNNNKGL-FYKNLFTITDKKPWFAKA 443
+ +R + +W+ ++ N K L YKNL
Sbjct: 1033 AAAAKRQIRRSIKDRWIREWKTEKTGPTTYRLVEVPNKKILDLYKNLS------------ 1080
Query: 444 IPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+ + ++R+ + +LHKI ++ L + HI+L CP Y
Sbjct: 1081 ---KSYASIIIQMRTQRNGLRHFLHKIKAVDSDQYLYALGSQTARHILLQCPLY 1131
>gi|154281205|ref|XP_001541415.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411594|gb|EDN06982.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 624
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 340 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 399
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 400 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 452
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 453 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRPTVEYQVKA 511
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 512 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 565
>gi|67538036|ref|XP_662792.1| hypothetical protein AN5188.2 [Aspergillus nidulans FGSC A4]
gi|40743179|gb|EAA62369.1| hypothetical protein AN5188.2 [Aspergillus nidulans FGSC A4]
Length = 411
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 14/98 (14%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNP---SHLI 342
AE AIL+AL + +V I+TDS+ + + N ++ P L+
Sbjct: 275 AELTAILRALDIAP--RHRDVTIVTDSQYAINCVTVWFQKWRSNNWLTADKKPVENKDLV 332
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
I + E + F WV+GH GNEA DRLA
Sbjct: 333 ESILSKIDERTELRVKTLFEWVKGHDADPGNEAADRLA 370
>gi|407278825|ref|ZP_11107295.1| hypothetical protein RhP14_20099, partial [Rhodococcus sp. P14]
Length = 160
Score = 42.4 bits (98), Expect = 0.74, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 279 KNSGTFKLKNFA---TIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSN 335
+ G F+ K F +I E AI A V++ + + I++DS+ L L+ +
Sbjct: 29 RADGNFRQKIFPDTRSILAGELLAIELA---VTTYRNRPLHILSDSRHALAGLRGEAPLT 85
Query: 336 GNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP 392
+ +I D + + + +R+ WVRGH+G NE DRLA R +A P
Sbjct: 86 TEAT-VIADRIRHRTR----GLPIRYSWVRGHSGHPLNEVADRLAVAARRAHEAQVP 137
>gi|357613963|gb|EHJ68812.1| polyprotein [Danaus plexippus]
Length = 922
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 50 PMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVKVIQM 109
P Q+G L G +GC + L +D +K + ++V WIDL A+ + HE M+ ++
Sbjct: 582 PNHQKGFLPGISGCLEHNTLLSESLKDARKSERQITVCWIDLENAFGSIQHELMLFALRW 641
Query: 110 Y 110
Y
Sbjct: 642 Y 642
>gi|317157858|ref|XP_001826621.2| reverse transcriptase [Aspergillus oryzae RIB40]
Length = 1012
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 91/234 (38%), Gaps = 34/234 (14%)
Query: 279 KNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNP 338
K + T + +T++ E I AL + + + DS++ ++ ++N + +G
Sbjct: 742 KRNCTLGTEEESTVYAGELTGIRMALHRLRR-ETRPATVFVDSQAAIQAIQNPRRPSGQ- 799
Query: 339 SHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE--TARGT----DALNP 392
ILD + V+ W+ H G+ GNEA D A+E T GT +A+
Sbjct: 800 --YILDQIYYIIRRYNMQNRVQIHWIPAHIGVPGNEAADEAAREGATREGTQQTGEAICL 857
Query: 393 YPIPVQDVRAVTDMQHEIQWRE--------NVMSQNNNKGL-FYKNLFTITDKKPWFAKA 443
+ +R + +W+ ++ N K L YKNL
Sbjct: 858 AAAAKRQIRRSIKDRWIREWKTEKTGPTTYRLVEVPNKKILDLYKNLS------------ 905
Query: 444 IPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+ + ++R+ + +LHKI ++ L + HI+L CP Y
Sbjct: 906 ---KSYASIIIQMRTQRNGLRHFLHKIKAVDSDQYLYALGSQTARHILLQCPLY 956
>gi|353931457|gb|AER23749.1| putative ribonuclease H [Enterobacteria phage H8]
Length = 158
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTA----EAFAILQALKYVSSIKENEVI 316
G CK + W F + N K+ + T E AI++AL++ ++
Sbjct: 10 GACKSNPGPGAWGFIVYDDNDDRLGSKSGYSPKTTNNEMELTAIVEALRWSVKKDNRPIV 69
Query: 317 IITDSKSCLEKL---------KNTSKSNGN-PSHLIL--DIFK-ALSHLQEWNISVRFIW 363
I TDS C + K K++G P +L L + FK ++ N + FI
Sbjct: 70 IYTDSAYCKNGMESWMFSWQRKGWKKADGEVPLNLELWQEAFKLTQQYINFHNTNPTFIK 129
Query: 364 VRGHAGIAGNEAVDRL 379
V+GH+GI+GNEAVD L
Sbjct: 130 VKGHSGISGNEAVDAL 145
>gi|429854941|gb|ELA29922.1| hypothetical protein CGGC5_1108 [Colletotrichum gloeosporioides
Nara gc5]
Length = 336
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 292 IFTAEAFAI---LQALKYVSSIKEN--EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIF 346
AE +A+ L+ Y+S + +V I TD K + L S+ +P L+
Sbjct: 105 FLVAELYALALGLETALYLSRAVPDLRQVNIFTDCKDAIRSLMRADASDDDP--LVQRAV 162
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
A + L+ + W GH G+ GNE D+LAK R
Sbjct: 163 AASAKLEAKGVRTAVRWCPGHVGVEGNERADQLAKAVRR 201
>gi|254728701|gb|ACT79529.1| pol protein [Simian immunodeficiency virus]
Length = 287
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AIL ALK + +V I+TDS+ L L+ T + +P L+ I + L + +
Sbjct: 25 AELQAILLALKDA----KEKVNIVTDSQYVLGILQGTPDQSDSP--LVEXIIQELMNKE- 77
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+V WV H GI GNE VD+L + R
Sbjct: 78 ---AVYLNWVPAHKGIGGNEEVDKLVSKNIR 105
>gi|119181104|ref|XP_001241800.1| hypothetical protein CIMG_05696 [Coccidioides immitis RS]
Length = 148
Score = 42.4 bits (98), Expect = 0.78, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 290 ATIFTAEAFAILQALK-----YVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
+T++ E ++ AL+ + + + I T++++ ++ + N S+G +++++
Sbjct: 58 STVYAVELRGLVLALEIILDLHATGTTPRKCAIFTNNQAAIQAIWNPKHSSGK--YILIE 115
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVD 377
+AL LQ V+F W+ H G+ GNE D
Sbjct: 116 AVQALDMLQNLGWEVQFQWIPAHVGVLGNEEAD 148
>gi|451168571|gb|AGF31236.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
WV H GI GNE VD+L R LN
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIRKVLFLN 714
>gi|407925622|gb|EKG18611.1| hypothetical protein MPH_04146, partial [Macrophomina phaseolina
MS6]
Length = 303
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 11/140 (7%)
Query: 363 WVRGHAGIAGNEAVDRLAKETAR-GTDALNPYPIPV-QDVRAVTDMQHEIQWRENVMSQN 420
WV GH + GNE D LAK+ A D P + V+ + E +W+ S
Sbjct: 10 WVPGHVNVHGNEEADLLAKKAATLPPDTDRPSLVYYGMQVKGRLYDEWENRWKSTPSSA- 68
Query: 421 NNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQ- 479
Y F K+ +R+ F +L++ H ++YLH+ N A + C
Sbjct: 69 ------YSKTFGWKIKRK-LKPPTSVRETASAFYQLKTGHGYFRSYLHRFNHAEDDGCPC 121
Query: 480 ECLEREDMAHIILCCPKYQV 499
++ H++L CP Y+
Sbjct: 122 SGTAKQTPKHLLLECPLYRT 141
>gi|38679133|gb|AAR26388.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 640 LQAIQLALQDSESEVHIVTDSQYALGIIQ--AQPDRSESELVNQIIEQLIKKEK----VY 693
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 694 ITWVPAHKGIGGNEQVDKLVSSGIR 718
>gi|156037410|ref|XP_001586432.1| hypothetical protein SS1G_12417 [Sclerotinia sclerotiorum 1980]
gi|154697827|gb|EDN97565.1| hypothetical protein SS1G_12417 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1549
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 88/221 (39%), Gaps = 22/221 (9%)
Query: 282 GTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL----KNTSKSNGN 337
G+ L ++ +EA A + LK ++I E I TD CL+ + + SKS G+
Sbjct: 1280 GSLPLGRMKEVYDSEAIAAFEGLK--AAISSIESRIATDIYICLDNIEVAARLLSKSTGS 1337
Query: 338 PSHLILDIFKALSHL-QEW-NISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPI 395
D F A L W N +V WV GH +AGNEA D+ AK A Y
Sbjct: 1338 SQ----DTFSAFRQLASTWHNGTVHIRWVPGHKDVAGNEAADKAAKAGAALPQPTGAY-- 1391
Query: 396 PVQDVRAVTDMQHEIQWRENVMSQ--NNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTF 453
+R VT R+ M+Q + Y++L T + ++P R F+
Sbjct: 1392 SYAGLRRVTK-----GLRQKAMNQLWSTVIPTTYRDLEIFTSPRNPKELSLP-RPFLGRL 1445
Query: 454 NRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
+RS H +Y + L C R+ H C
Sbjct: 1446 IAIRSGHGDFASYHERFLHQDAQLLCRCGARKSPVHFFFCS 1486
>gi|51512029|gb|AAU05228.1| ribonuclease H [Enterobacteria phage T5]
Length = 162
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTA----EAFAILQALKYVSSIKENEVI 316
G CK + W F + N K+ + T E AI++AL++ ++
Sbjct: 14 GACKSNPGPGAWGFIVYDDNDDRLGSKSGYSPKTTNNEMELTAIVEALRWSVKKDNRPIV 73
Query: 317 IITDSKSCLEKL---------KNTSKSNGN-PSHLIL--DIFK-ALSHLQEWNISVRFIW 363
I TDS C + K K++G P +L L + FK ++ N + FI
Sbjct: 74 IYTDSAYCKNGMESWMFSWQRKGWKKADGEVPLNLELWQEAFKLTQQYINFHNTNPTFIK 133
Query: 364 VRGHAGIAGNEAVDRL 379
V+GH+GI+GNEAVD L
Sbjct: 134 VKGHSGISGNEAVDAL 149
>gi|303232773|ref|ZP_07319458.1| ribonuclease HI [Atopobium vaginae PB189-T1-4]
gi|302481259|gb|EFL44334.1| ribonuclease HI [Atopobium vaginae PB189-T1-4]
Length = 207
Score = 42.4 bits (98), Expect = 0.82, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
+D++K L + + ++R+ WV+GHAGIAGNE D LA + A
Sbjct: 139 IDLWKRLIEASQRH-TIRYHWVKGHAGIAGNERCDELATQAA 179
>gi|440471788|gb|ELQ40733.1| ribonuclease H [Magnaporthe oryzae Y34]
gi|440479505|gb|ELQ60268.1| ribonuclease H [Magnaporthe oryzae P131]
Length = 341
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 295 AEAFAILQALKYVSSIKENE-VIIITDSK---SCL------EKLKNTSKSNGNP---SHL 341
AE AIL+AL+ S+ NE V I +DSK SC+ + N + S G L
Sbjct: 233 AELTAILRALQ---SLGANEGVRIFSDSKYSISCVCDWYKKWQTSNWTTSAGKEVMNKDL 289
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I I + + ++ + F+WV+GHA GN D LA E A+
Sbjct: 290 IQPIRRLIEQREKRGVKTEFVWVKGHAATEGNVQADLLAVEGAK 333
>gi|294952671|ref|XP_002787406.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239902378|gb|EER19202.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 664
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 277 QNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNG 336
+ +G + L + AT+ AE AI ALK ++ ++ DSKS L ++ G
Sbjct: 410 HSGEAGLYCLPSHATVQQAELVAIKMALKTIN----RRCMVAVDSKSALMSIR------G 459
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ S +L+ + L F WV+ H G NE VD LAK R
Sbjct: 460 DRSTTLLEEIRGLIR----KTGAMFTWVKAHNGALYNEWVDALAKSATR 504
>gi|225351001|ref|ZP_03742024.1| hypothetical protein BIFPSEUDO_02582 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225158457|gb|EEG71699.1| hypothetical protein BIFPSEUDO_02582 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 392
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNG--NPSHLIL---DIF 346
E A+L+AL+ + ++I TDS+ +C + K NG N + D+
Sbjct: 37 GELCAVLEALR--AHPGSEPLVIETDSQYAINCSTTWVHGWKKNGWKNSQKKPVKNADLI 94
Query: 347 KAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
+A+ + + + V+F+WV+GHAG AGNE VD LA+
Sbjct: 95 RAIDAEISKRPGPVKFVWVKGHAGNAGNEKVDELAR 130
>gi|392559957|gb|EIW53141.1| ribonuclease H-like protein, partial [Trametes versicolor FP-101664
SS1]
Length = 152
Score = 42.4 bits (98), Expect = 0.84, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLIL--DIFKA-LSH 351
AE FA+L AL++ + ++ + + TDS + + + + N + D+ ++ L
Sbjct: 63 AELFAVLHALRHANPVRS--LALHTDSTYVIHSICHWAPRNAELGWIAAHSDLLQSILQV 120
Query: 352 LQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
L+ VRF WV+ HAG A N+ DRLAK
Sbjct: 121 LRARGAPVRFCWVKVHAGNALNDLADRLAK 150
>gi|328834415|gb|AEB52827.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIYLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIQKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSTGVR 712
>gi|295395280|ref|ZP_06805484.1| ribonuclease HI [Brevibacterium mcbrellneri ATCC 49030]
gi|294971831|gb|EFG47702.1| ribonuclease HI [Brevibacterium mcbrellneri ATCC 49030]
Length = 215
Score = 42.4 bits (98), Expect = 0.86, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 17/138 (12%)
Query: 272 WIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLE----- 326
W+ D + +G ++ +T AE A+++ LK + E +++I+ DSK +
Sbjct: 21 WVIDDERWAAGGWEE---STNNRAELQAVIEILKATAHTHE-DILILADSKYVINSVTKW 76
Query: 327 ----KLKNTSKSNGNP---SHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRL 379
+LK K+NG L+ ++++ + L++ +++F WV+GH+ NE D+
Sbjct: 77 MPVWRLKGWKKANGQDVLNRDLMEELWEQVDALEKSGRTLKFQWVKGHSNHELNETADQR 136
Query: 380 AKETARGT-DALNPYPIP 396
A+ A D P+ P
Sbjct: 137 ARAVATAIRDKTEPHLGP 154
>gi|341571918|gb|AEK79594.1| pol polyprotein [Simian immunodeficiency virus]
Length = 999
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 280 NSGTFKLKNF--ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
N G ++ K T AE +AI ALK + +V I+TDS+ + L+ + +
Sbjct: 611 NRGRYRTKELENTTNQQAELWAIDLALKDSGA----QVNIVTDSQYVMGVLQGLPDQSDS 666
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
P ++ I + L+ ++ WV H GI GNE VD+L + R
Sbjct: 667 P--IVEQIIQQLTQ----KAAIYLAWVPAHKGIGGNEEVDKLVSKNIR 708
>gi|259484645|tpe|CBF81045.1| TPA: ribonuclease H, putative (AFU_orthologue; AFUA_1G07180)
[Aspergillus nidulans FGSC A4]
Length = 463
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 14/98 (14%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNP---SHLI 342
AE AIL+AL + +V I+TDS+ + + N ++ P L+
Sbjct: 327 AELTAILRALDIAP--RHRDVTIVTDSQYAINCVTVWFQKWRSNNWLTADKKPVENKDLV 384
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
I + E + F WV+GH GNEA DRLA
Sbjct: 385 ESILSKIDERTELRVKTLFEWVKGHDADPGNEAADRLA 422
>gi|67508808|emb|CAJ00450.1| putative reverse transcriptase [Toxorhynchites brevipalpis]
Length = 134
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 17/91 (18%)
Query: 44 NDNNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHE-- 101
N+NNI+P EQ G +G + LL L I E K K+ ++A +D+ KA+DN H+
Sbjct: 28 NENNIIPPEQFGFRKGHSTIHQLLRLKNKILEH-KAVSKSTAMALLDVEKAFDNVWHDGL 86
Query: 102 -----------WMVKVIQMYKIDLKSATFCV 121
++VK+I+ Y LK TF V
Sbjct: 87 IYKLCLLNTPVYLVKIIRSY---LKDRTFRV 114
>gi|242827039|ref|XP_002488756.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712148|gb|EED11575.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 473
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 313 NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE----WNISVRFIWVRGHA 368
+E I TD+++ + +S+G ++I I + L L++ W VR WV GH
Sbjct: 294 HEATIYTDNQAAIRATCQPGRSSGQ--YIIRRIVRHLGLLRDNRSRWR--VRLQWVPGHE 349
Query: 369 GIAGNEAVDRLAKETA 384
G+ GNE D+LAK A
Sbjct: 350 GVPGNEKADQLAKLAA 365
>gi|425771876|gb|EKV10308.1| hypothetical protein PDIG_57410 [Penicillium digitatum PHI26]
Length = 124
Score = 42.4 bits (98), Expect = 0.91, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 12/112 (10%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKY--VSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
++G + + + +F AEA + L++ V + +++ + DS S + ++ GN
Sbjct: 8 DTGAGAINSRSHVFDAEAIGAWRGLEWAIVVAPPRSKIWLCIDSTSVIWCIR------GN 61
Query: 338 PSHLILDIFKALSH-LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA-RGT 387
S+ F A +++ NIS+R W GH GI GNEA D LA E A RG+
Sbjct: 62 ASNSSQWAFLACHRAMEQHNISLR--WAPGHTGIEGNEAADTLAGEGALRGS 111
>gi|339507535|gb|AEJ81179.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 575 LQAIXLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEELIKKEK----VY 628
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 629 LAWVPAHKGIGGNEQVDKLVSXGIR 653
>gi|254691749|gb|ACT79338.1| pol protein [Simian immunodeficiency virus]
Length = 296
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 280 NSGTFKLKNF--ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
N G ++ K T AE +AI ALK + +V I+TDS+ + L+ + +
Sbjct: 14 NRGRYRTKELENTTNQQAELWAIDLALKDSGT----QVNIVTDSQYVMGVLQGLPDQSDS 69
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
P ++ I + L+ ++ WV H GI GNE VD+L + R
Sbjct: 70 P--IVEQIIQQLTQ----KTAIYLAWVPAHKGIGGNEKVDKLVSKNIR 111
>gi|391379712|gb|AFM44341.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1002
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L L+ ++ + + S L+ I + L L+E V
Sbjct: 633 LQAIYLALQDSESEVNIVTDSQYALGILQ--AQPDKSESELVSQIIEQLI-LKE---KVY 686
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 687 LAWVPAHKGIGGNERVDKLVSAGIR 711
>gi|415718714|ref|ZP_11467520.1| ribonuclease H [Gardnerella vaginalis 1500E]
gi|388059756|gb|EIK82474.1| ribonuclease H [Gardnerella vaginalis 1500E]
Length = 320
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE--------KLKNTSKSNGNPSHLILDIF 346
E A+L+AL+ + + I TDS+ + KN K++ N D+
Sbjct: 54 GELCAVLEALR--AHPGSEPLTIETDSQYAINCSTTWIHGWKKNGWKNSKNEPVKNADLI 111
Query: 347 KAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+A+ + + + +V+F+WV+GHAG AGNE VD LA+ A
Sbjct: 112 RAIDAEITKREGAVKFVWVKGHAGNAGNEKVDTLARTYAE 151
>gi|406928527|gb|EKD64315.1| ribonuclease H [uncultured bacterium]
Length = 202
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 296 EAFAILQALKYVSSIKENEVI-IITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
E A ++ALK+V + I + +DS ++ + KS N LD+++ LS L E
Sbjct: 47 EIMAAIEALKWVKKNHADAKIDLFSDSTLLIKTMSGEFKSKKN-----LDLWRELSGLAE 101
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPI 395
+ + + WV+GHA N D+LA+E A D + P +
Sbjct: 102 -GLDIEWNWVKGHASDKYNNMCDKLAQEAA---DKVEPADV 138
>gi|357622609|gb|EHJ74035.1| putative pol-like protein [Danaus plexippus]
Length = 836
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 195 DKWPNAYLIFTDGSKTSESVASAFYDTQNKNSGTFKLQNFATIFTAE 241
D+W + I+TDGS+ +E+V+ A YD+Q K+ +L +I++AE
Sbjct: 788 DRWQGYHQIYTDGSRNNEAVSIAVYDSQVKSGFGHRLNPLTSIYSAE 834
>gi|254691755|gb|ACT79341.1| pol protein [Simian immunodeficiency virus]
Length = 296
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 280 NSGTFKLKNF--ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
N G ++ K+ T AE +A+ ALK + +V I+TDS+ + L+ + +
Sbjct: 14 NRGRYRSKDLENTTNQQAELWAVDLALKDSGA----QVNIVTDSQYVMGVLQGLPDQSDS 69
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
P ++ I + L+ +V WV H GI GNE VD+L + R
Sbjct: 70 P--IVEQIIQKLTQ----KTAVYLAWVPAHKGIGGNEEVDKLVSKNIR 111
>gi|212537985|ref|XP_002149148.1| hypothetical protein PMAA_095840 [Talaromyces marneffei ATCC 18224]
gi|210068890|gb|EEA22981.1| hypothetical protein PMAA_095840 [Talaromyces marneffei ATCC 18224]
Length = 465
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 28/143 (19%)
Query: 367 HAGIAGNEAVDRLAKETARGTDALNPYPIPVQDV------RAVTDMQHEI--QW-RENVM 417
H G+ GNE D+ AK A P +D+ R+ T+ + W REN +
Sbjct: 253 HNGVEGNEQADQAAKRAAS-----KPPKPSFEDLSLAYIRRSCTEARRAAVENWARENAV 307
Query: 418 SQNNNKGLFYK-----NLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINI 472
+ +G YK L K P ++ + +L++ HA YLH+I
Sbjct: 308 QGAHRRGRAYKMPRGWGLDRTAAKAP--------KRVASCYYQLKTGHAPIGTYLHRIKA 359
Query: 473 APTNLCQECLE-REDMAHIILCC 494
+ C+ C E RE ++HII C
Sbjct: 360 RDSLECRACGELRETISHIIFEC 382
>gi|353241387|emb|CCA73205.1| hypothetical protein PIIN_07159 [Piriformospora indica DSM 11827]
Length = 224
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 12/153 (7%)
Query: 361 FIWVRGHAGIAGNEAVDRLAKET-ARGTDALNPYPIPVQDV--RAVTDMQHEIQWRENVM 417
W GH GI GNE D AK+ G+ P ++D R ++ ++ E++
Sbjct: 24 LTWTPGHEGIKGNETEDEEAKKAITDGSSTAEILPPWMKDALPRNISALRQELKLAAKKS 83
Query: 418 SQNN-NKGLFYKNLFTITDKKPWFAKAIP-----LRKFIVTFNRLRSNHAICQAYLHKIN 471
++N Y TI + P +K + +R +LR+ + +L++IN
Sbjct: 84 ARNKWTSSAQYNRTKTIDESMP-SSKYLQITDELMRAEAAILIQLRTGYIGLNKHLNRIN 142
Query: 472 IAPTNLCQECLE--REDMAHIILCCPKYQVTLA 502
A C C E E++ H++ CP Y A
Sbjct: 143 RADAPWCPHCGEGNAENVTHLLHICPAYNAARA 175
>gi|154276786|ref|XP_001539238.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414311|gb|EDN09676.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 935
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 658 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 717
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 718 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 770
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 771 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 829
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 830 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 883
>gi|154273424|ref|XP_001537564.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150416076|gb|EDN11420.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1153
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 876 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 935
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 936 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 988
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 989 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSLSRPTVEYQVKA 1047
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1048 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1101
>gi|242770563|ref|XP_002342006.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218725202|gb|EED24619.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1159
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 288 NFATIFTAEAFAILQALKYVSSIKE-----NEVIIITDSKSCLEKLKNTSKSNGNPSHLI 342
N T++ E I AL+ + + +E I TD+++ + +S+G +++
Sbjct: 969 NTHTVYAGELEGIDAALEILLRSQPCDDNPHEATIYTDNQAAIRATCQPGRSSGQ--YIL 1026
Query: 343 LDIFKALSHLQE----WNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
I + L L++ W VR WV GH G+ GNE D+LAK A
Sbjct: 1027 RRIVRHLGLLRDNRSRWR--VRLQWVPGHEGVPGNEKADQLAKLAA 1070
>gi|209489243|gb|ACI49025.1| hypothetical protein Cbre_JD04.010 [Caenorhabditis brenneri]
Length = 247
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 296 EAFAILQAL-KYVSSIKENEVIIITDSKSCLEKLKNTSK---------SNGNPSH---LI 342
E AI QAL + + S E ++ I TDSK + +K+ K S G H LI
Sbjct: 60 ELEAIGQALERSLESGGEYDITIFTDSKYAINSIKHWIKKWKQNGWRNSQGKRVHNDLLI 119
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
DI L + SV F +V H+G NE DRLAK+ A
Sbjct: 120 QDIDSMLEDINYAGGSVEFEYVEAHSGNWFNEKADRLAKKAA 161
>gi|389722526|ref|ZP_10189155.1| ribonuclease H [Rhodanobacter sp. 115]
gi|388441559|gb|EIL97824.1| ribonuclease H [Rhodanobacter sp. 115]
Length = 151
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLEKLK--------NTSKSNGNPSHLILDIFK 347
E A + AL+ ++ + +V++ TDS+ ++ ++ N ++ G D+++
Sbjct: 47 ELLAAISALEALT--RPCQVVLTTDSRYVMQGIEQWVPKWRANGWRTAGRQPVKNQDLWE 104
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
LSH + VR+ WVRGH G A NE VD+ A+E A
Sbjct: 105 RLSHATGKH-QVRWQWVRGHNGHAENERVDQAAREQA 140
>gi|334131968|ref|ZP_08505730.1| Ribonuclease HI [Methyloversatilis universalis FAM5]
gi|333443441|gb|EGK71406.1| Ribonuclease HI [Methyloversatilis universalis FAM5]
Length = 144
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 23/101 (22%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILDIF 346
E A+++AL + K ++ TDS+ + K K + G+P + D++
Sbjct: 47 ELMAVIEALNALK--KPVRAVVYTDSQYVQKGISEWIHGWKRKGWKTAGGDPVKNV-DLW 103
Query: 347 KALS-----HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
KAL H EW WV+GHAG NE VDRLA+E
Sbjct: 104 KALDAAAGVHQVEWK------WVKGHAGHPENERVDRLARE 138
>gi|302666316|ref|XP_003024759.1| hypothetical protein TRV_01108 [Trichophyton verrucosum HKI 0517]
gi|291188828|gb|EFE44148.1| hypothetical protein TRV_01108 [Trichophyton verrucosum HKI 0517]
Length = 435
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 94/254 (37%), Gaps = 33/254 (12%)
Query: 143 EDITMSGDCPRDKRGIPPDPGKGSGNATQDDGDQYESAPEYAKQNCFLNEVKDKW-PNAY 201
E +G P +K +P PG N D GD+Y A +D + PN
Sbjct: 170 EAFVRNGQTPSNKDSLPGAPGLMESNPKDDAGDEY-----AAGTGPLPPGAEDGFDPNIL 224
Query: 202 LIFTDGS---KTSESVASAFYDTQNKNSGTFKLQNFATIFTAEAFAILQALKYASSIKEK 258
L T G KT E Q K SG I+T + AL+ +S
Sbjct: 225 LDPTTGKIVYKTPEQKQE--RKIQPKPSGP---PGMLKIYTDGS-----ALRNGTSRARA 274
Query: 259 EAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIII 318
G ESL+ + ++N + T AE AI +AL K +V I
Sbjct: 275 GVGVYFGPDDESLFSSLSSSRNVSEPLAGSRQTNQRAELTAISRALDIAP--KHRDVTIF 332
Query: 319 TDSKSCLE---------KLKNTSKSNGNP---SHLILDIFKALSHLQEWNISVRFIWVRG 366
TDSK ++ + N S P LI I + + + F WV+G
Sbjct: 333 TDSKYSIDCVTVWCINWQRNNWVTSTQKPVENKDLIQAILSKIEERKSLKVKTLFEWVKG 392
Query: 367 HAGIAGNEAVDRLA 380
H AGNEA DRLA
Sbjct: 393 HNKDAGNEAADRLA 406
>gi|154280733|ref|XP_001541179.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411358|gb|EDN06746.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 650
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 373 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 432
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 433 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 485
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 486 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRPTVEYQVKA 544
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 545 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 598
>gi|119507949|dbj|BAF42353.1| Pol [Human immunodeficiency virus 1]
Length = 1006
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 633 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 686
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 687 LSWVPAHKGIGGNEQVDKLVSSGIR 711
>gi|357607906|gb|EHJ65733.1| polyprotein [Danaus plexippus]
Length = 1099
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 50 PMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVKVIQM 109
P Q+G L G +GC + L +D +K + ++V WIDL A+ + HE M+ ++
Sbjct: 397 PNHQKGFLPGISGCLEHNTLLSESLKDARKSERQITVCWIDLENAFGSIQHELMLFALRW 456
Query: 110 Y 110
Y
Sbjct: 457 Y 457
>gi|328710861|ref|XP_003244383.1| PREDICTED: hypothetical protein LOC100570071 [Acyrthosiphon pisum]
Length = 90
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 362 IWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNN 421
+W+ GH I GNE D+ AK+ + L QDV+ + ++ + QW ++Q
Sbjct: 1 MWIPGHCNIEGNELADKAAKQAHLANNPLTSPVFTYQDVKRIIAIEAQNQWENKWVAQTT 60
Query: 422 N 422
N
Sbjct: 61 N 61
>gi|340794897|ref|YP_004760360.1| hypothetical protein CVAR_1934 [Corynebacterium variabile DSM
44702]
gi|340795749|ref|YP_004761212.1| ribonuclease H1 [Corynebacterium variabile DSM 44702]
gi|340534807|gb|AEK37287.1| hypothetical protein CVAR_1934 [Corynebacterium variabile DSM
44702]
gi|340535659|gb|AEK38139.1| ribonuclease H1 [Corynebacterium variabile DSM 44702]
Length = 339
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 272 WIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENE-VIIITDSKSCLEKLKN 330
W+ DT + SG +L + + AE I++AL V V+++ DS+ L L+
Sbjct: 188 WVTDTGDAGSG--RLPHCPS-SRAEYQGIVKALTAVVRRHPGRPVVLLCDSRPALALLRR 244
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ ++D S+R WV+GH+G+A N+A DRL T R
Sbjct: 245 QGTGREDLDRRLIDG------------SIRTRWVKGHSGVALNDAADRLCLGTRR 287
>gi|119507939|dbj|BAF42344.1| Pol [Human immunodeficiency virus 1]
Length = 1006
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 633 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 686
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 687 LSWVPAHKGIGGNEQVDKLVSSGIR 711
>gi|16751230|gb|AAL05308.1| pol protein [Human immunodeficiency virus 1]
Length = 999
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV IITDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIITDSQYALGIIQ--AQPDRSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
WV H G+AGNE VD+L R L+
Sbjct: 684 LSWVPAHNGLAGNEHVDKLVSRGIRKVLVLD 714
>gi|383860150|ref|XP_003705554.1| PREDICTED: leucine-rich repeat-containing protein 15-like
[Megachile rotundata]
Length = 635
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 277 QNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNG 336
+N+++ K + IF E AI A+K + + I DS S + ++ S+
Sbjct: 62 RNQSTEKVKFHHKTPIFLCELQAITHAIKSTLTDQNTNFAIFCDSTSAISAIQKLWTSD- 120
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
+I + +A + + N S+ +W+ H I GN+ DR AKE A T
Sbjct: 121 ---FVIQECQEAYTRSSQKNNSITIMWILSHIDITGNDKADRAAKEAANST 168
>gi|336242097|ref|XP_003342951.1| hypothetical protein SMAC_09848 [Sordaria macrospora k-hell]
Length = 343
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 273 IFDTQNK-NSGTFKLKNFATIFTAEAFAILQALKYVSSI-----KENEVIIITDSKSCLE 326
IF Q + G +L++ A +F AEA LK ++ + + D+ S +
Sbjct: 151 IFQGQTELGRGCGQLEH-AEVFDAEAEGARHGLKAAVALFPEAQARPRITVCLDNTSVIR 209
Query: 327 KLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG 386
L+ T ++ + LD + VR WV GH GI GNE D LAK A G
Sbjct: 210 GLRGTPAASSQAA--FLDFRATRMGYGPSLVDVR--WVPGHKGITGNEIADELAKAGAEG 265
Query: 387 TDALN 391
+ +N
Sbjct: 266 GEVVN 270
>gi|27448795|gb|AAO13960.1|AF447763_2 pol [Simian immunodeficiency virus]
gi|147744242|gb|ABQ51060.1| pol protein [Simian immunodeficiency virus]
Length = 999
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 280 NSGTFKLKNF--ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
N G ++ K+ T AE +A+ ALK + +V I+TDS+ + L+ + +
Sbjct: 611 NRGRYRSKDLENTTNQQAELWAVDLALKDSGA----QVNIVTDSQYVMGVLQGLPDQSDS 666
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
P ++ I + L+ ++ WV H GI GNE VD+L + R
Sbjct: 667 P--IVEQIIQKLTQ----KTAIYLAWVPAHKGIGGNEEVDKLVSKNIR 708
>gi|443710129|gb|ELU04460.1| hypothetical protein CAPTEDRAFT_135802, partial [Capitella teleta]
Length = 146
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSK---SCLEKL-----KNTSKSNGNPSHLILDIF 346
AE +A +A++ + ++I TDS+ SC+ K K K+ + + +
Sbjct: 48 AEIYAAHRAIEQAKEMNIQNLVIFTDSQFLISCITKWIQNWKKRGWKTTSGKAVINREEL 107
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ L + + I+VR+ V+GH+G+ GNE D+LA E AR
Sbjct: 108 ENLDSVMQ-GINVRWEHVKGHSGVEGNEMADQLANEGAR 145
>gi|24754005|gb|AAN64123.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L + ++ V
Sbjct: 634 LQAIHLALQDSESEVNIVTDSQYALGIIQ--AQPDRSESELVSQIIEQLINKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSAGIR 712
>gi|326329906|ref|ZP_08196221.1| ribonuclease H (RNase H) [Nocardioidaceae bacterium Broad-1]
gi|325952297|gb|EGD44322.1| ribonuclease H (RNase H) [Nocardioidaceae bacterium Broad-1]
Length = 324
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILDI 345
E A+L L+ + E ++I DSK + K K K++G P L ++I
Sbjct: 42 GELTAVLDLLQQTAHTGE-PLLIYCDSKYVINSVTKWMAGWKRKGWKKADGKPV-LNVEI 99
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
K L + +VRF W++GH+G NEA DRLA A
Sbjct: 100 MKELDAAMQ-GRNVRFEWIKGHSGHPLNEAADRLANGAA 137
>gi|2935442|gb|AAC78563.1| ribonuclease H1 [Homo sapiens]
gi|2935444|gb|AAC78564.1| ribonuclease H1 [Homo sapiens]
Length = 286
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNG 336
+L T AE A +A++ + N++++ TDS + + KN K++
Sbjct: 175 RLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTINGITNWVQGWKKNGWKTSA 234
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ + F AL L + + ++++ V GH+G GNE DRLA+E A+ ++
Sbjct: 235 GKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREGAKQSE 285
>gi|341571586|gb|AEK79410.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSNGIR 712
>gi|158931164|sp|Q8AII1.4|POL_SIVTN RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Nucleocapsid protein p7;
Short=NC; Contains: RecName: Full=p6-pol; Short=p6*;
Contains: RecName: Full=Protease; AltName: Full=PR;
AltName: Full=Retropepsin; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1462
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 280 NSGTFKLKNF--ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
N G ++ K+ T AE +A+ ALK + +V I+TDS+ + L+ + +
Sbjct: 1074 NRGRYRSKDLENTTNQQAELWAVDLALKDSGA----QVNIVTDSQYVMGVLQGLPDQSDS 1129
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
P ++ I + L+ ++ WV H GI GNE VD+L + R
Sbjct: 1130 P--IVEQIIQKLTQ----KTAIYLAWVPAHKGIGGNEEVDKLVSKNIR 1171
>gi|114575921|ref|XP_001150506.1| PREDICTED: ribonuclease H1 isoform 2 [Pan troglodytes]
gi|397471807|ref|XP_003807469.1| PREDICTED: ribonuclease H1 [Pan paniscus]
gi|410214322|gb|JAA04380.1| ribonuclease H1 [Pan troglodytes]
gi|410253442|gb|JAA14688.1| ribonuclease H1 [Pan troglodytes]
gi|410298660|gb|JAA27930.1| ribonuclease H1 [Pan troglodytes]
gi|410334637|gb|JAA36265.1| ribonuclease H1 [Pan troglodytes]
Length = 286
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNG 336
+L T AE A +A++ + N++++ TDS + + KN K++
Sbjct: 175 RLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTINGITNWVQGWKKNGWKTSA 234
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ + F AL L + + ++++ V GH+G GNE DRLA+E A+ ++
Sbjct: 235 GKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREGAKQSE 285
>gi|28493206|ref|NP_787367.1| ribonuclease H [Tropheryma whipplei str. Twist]
gi|28572680|ref|NP_789460.1| ribonuclease H [Tropheryma whipplei TW08/27]
gi|81839141|sp|Q83GM3.1|RNH_TROWT RecName: Full=Ribonuclease H; Short=RNase H
gi|81839168|sp|Q83HK9.1|RNH_TROW8 RecName: Full=Ribonuclease H; Short=RNase H
gi|28410812|emb|CAD67198.1| ribonuclease HI [Tropheryma whipplei TW08/27]
gi|28476247|gb|AAO44336.1| ribonuclease H [Tropheryma whipplei str. Twist]
Length = 161
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 272 WIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLE----- 326
W D +SG + + AT AE A+ + L + + ++I++DSK +
Sbjct: 25 WYVDENTWDSGGW---DIATNNIAELTAVRELL-IATRHTDRPILILSDSKYVINSLTKW 80
Query: 327 ----KLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
K++ K++G P L +I + + L E N ++R WV H G NEA D LA++
Sbjct: 81 VYSWKMRKWRKADGKPV-LNQEIIQEIDSLME-NRNIRMSWVNAHTGHPLNEAADSLARQ 138
Query: 383 TA 384
A
Sbjct: 139 AA 140
>gi|380086424|emb|CCC05734.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 370
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 9/124 (7%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI-----KENEVIIITDSKSCLEK 327
IF Q + +A +F AEA LK ++ + + D+ S +
Sbjct: 33 IFQGQTEIGRGCGQLEYAEVFDAEAEGARHGLKAAVALFPEAQARPHITVCLDNTSVIRG 92
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
L+ T ++ + LD +SVR WV GH GI GN D LAK A G
Sbjct: 93 LRGTPAASSQAA--FLDFRATCKGYGPDLVSVR--WVPGHKGITGNGIADELAKAGAEGG 148
Query: 388 DALN 391
+ +N
Sbjct: 149 EVVN 152
>gi|322800828|gb|EFZ21702.1| hypothetical protein SINV_10641 [Solenopsis invicta]
Length = 216
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 428 KNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLC 478
KN F + ++KPWF RK +V+ NRLRS H L K N+ + LC
Sbjct: 104 KNRFPVRNRKPWFNGFKFRRKSVVSINRLRSKHTTLAECLFKHNVVDSPLC 154
>gi|313574246|dbj|BAJ41070.1| Pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSTGIR 712
>gi|336257547|ref|XP_003343625.1| hypothetical protein SMAC_10091 [Sordaria macrospora k-hell]
Length = 365
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 9/124 (7%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI-----KENEVIIITDSKSCLEK 327
IF Q + +A +F AEA LK ++ + + D+ S +
Sbjct: 28 IFQGQTEIGRGCGQLEYAEVFDAEAEGARHGLKAAVALFPEAQARPHITVCLDNTSVIRG 87
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
L+ T ++ + LD +SVR WV GH GI GN D LAK A G
Sbjct: 88 LRGTPAASSQAA--FLDFRATCKGYGPDLVSVR--WVPGHKGITGNGIADELAKAGAEGG 143
Query: 388 DALN 391
+ +N
Sbjct: 144 EVVN 147
>gi|156254405|gb|ABU62692.1| RNase H [Human immunodeficiency virus 1]
Length = 120
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 39 LQAIQLALQDSETEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 92
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 93 LAWVPAHKGIGGNEQVDKLVSSGIR 117
>gi|54696208|gb|AAV38476.1| ribonuclease H1 [Homo sapiens]
Length = 286
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNG 336
+L T AE A +A++ + N++++ TDS + + KN K++
Sbjct: 175 RLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTINGITNWVQGWKKNGWKTSA 234
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ + F AL L + + ++++ V GH+G GNE DRLA+E A+ ++
Sbjct: 235 GKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREGAKQSE 285
>gi|451849575|gb|EMD62878.1| hypothetical protein COCSADRAFT_57594, partial [Cochliobolus
sativus ND90Pr]
Length = 145
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 4/132 (3%)
Query: 363 WVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPV--QDVRAVTDMQHEIQWRENVMSQN 420
W GH I GNE D LAKE + T + + ++ + +WR+ +
Sbjct: 16 WAPGHTDIEGNEKADSLAKEATKQTPKESKTSLAFIGTKIKLLQRASQAEEWRK-YREKA 74
Query: 421 NNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQE 480
K Y +F + K R+ +F L+ H AYL ++ T LC+
Sbjct: 75 REKKTSYGAIFNLKLKNQLVIPRGTKREISSSFYSLKIGHGYFNAYLKRVKRRETELCK- 133
Query: 481 CLEREDMAHIIL 492
C + H++L
Sbjct: 134 CGRPQTAEHLLL 145
>gi|444892692|gb|AGE13501.1| pol protein, partial [Human immunodeficiency virus]
Length = 1008
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE A+L ALK + +V I+TDS+ L + +S+ + S ++ I + L+ ++
Sbjct: 627 AELMAVLLALKD----SKEKVNIVTDSQYVLGII--SSQPTQSESPIVQQIIEELTRKEQ 680
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE +D+L + R
Sbjct: 681 ----VYLAWVPAHKGIGGNEKIDKLVSQDIR 707
>gi|392558075|gb|EIW51318.1| RnaseH-domain-containing protein, partial [Trametes versicolor
FP-101664 SS1]
Length = 188
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 361 FIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQD 399
F W++GHAG GNE DRLA E A P +P D
Sbjct: 62 FKWIKGHAGTRGNEEADRLAGEAATLPLPFRPLSLPAPD 100
>gi|408790368|ref|ZP_11201992.1| Ribonuclease HI [Lactobacillus florum 2F]
gi|408520356|gb|EKK20413.1| Ribonuclease HI [Lactobacillus florum 2F]
Length = 231
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 18/108 (16%)
Query: 290 ATIFTAEAFAILQALKY--VSSIKENEVIIITDSKSCLEKLKNT----------SKSNGN 337
AT E A++QAL++ ++ +++ ++ +I+DS+ L +K +SNG
Sbjct: 120 ATNNQMEIMALIQALRWLVINDLQQYQIGVISDSRYVLGAIKQGWLAGWKRRGWQRSNGE 179
Query: 338 PSHLIL--DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKET 383
+ L + + L H Q ++F W +GHA GN VD+L +T
Sbjct: 180 LKNKTLWQQLEQELQHFQH----IQFGWTKGHATNRGNVYVDKLLNQT 223
>gi|154273212|ref|XP_001537458.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415970|gb|EDN11314.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 265
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 24/218 (11%)
Query: 292 IFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEKLKNTSKSNGNPSHLIL 343
+F AEA +AL K + + E+ ++ + D+ S + ++ ++ ++ N ++
Sbjct: 4 VFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWGIRGSAAASSNWAY--- 60
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDA----LNPYPIPVQD 399
+ L++ N+ ++ W GH GI GNE DRLAK T A L P V
Sbjct: 61 --NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSSTAAPAYGLEATPT-VSG 115
Query: 400 VRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP----LRKFIVTFNR 455
VR V + R+ +Y+ + KA P R + +
Sbjct: 116 VRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKAPPELTMPRHALHRWLA 175
Query: 456 LRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
LRS+H Y + A L C + H++LC
Sbjct: 176 LRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 213
>gi|49456597|emb|CAG46619.1| RNASEH1 [Homo sapiens]
Length = 286
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNG 336
+L T AE A +A++ + N++++ TDS + + KN K++
Sbjct: 175 RLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTINGITNWVQGWKKNGWKTSA 234
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ + F AL L + + ++++ V GH+G GNE DRLA+E A+ ++
Sbjct: 235 GKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREGAKQSE 285
>gi|21359816|ref|NP_002927.2| ribonuclease H1 precursor [Homo sapiens]
gi|13878716|sp|O60930.2|RNH1_HUMAN RecName: Full=Ribonuclease H1; Short=RNase H1; AltName:
Full=Ribonuclease H type II
gi|3004981|gb|AAC09261.1| ribonuclease H type II [Homo sapiens]
gi|12804229|gb|AAH02973.1| Ribonuclease H1 [Homo sapiens]
gi|60655541|gb|AAX32334.1| ribonuclease H1 [synthetic construct]
gi|62420309|gb|AAX82026.1| unknown [Homo sapiens]
gi|119621466|gb|EAX01061.1| ribonuclease H1 [Homo sapiens]
gi|123984355|gb|ABM83523.1| ribonuclease H1 [synthetic construct]
gi|123998297|gb|ABM86750.1| ribonuclease H1 [synthetic construct]
gi|193786833|dbj|BAG52156.1| unnamed protein product [Homo sapiens]
gi|311347258|gb|ADP90574.1| ribonuclease H1 [Homo sapiens]
gi|311347260|gb|ADP90575.1| ribonuclease H1 [Homo sapiens]
gi|311347262|gb|ADP90576.1| ribonuclease H1 [Homo sapiens]
gi|311347264|gb|ADP90577.1| ribonuclease H1 [Homo sapiens]
gi|311347266|gb|ADP90578.1| ribonuclease H1 [Homo sapiens]
gi|311347268|gb|ADP90579.1| ribonuclease H1 [Homo sapiens]
gi|311347270|gb|ADP90580.1| ribonuclease H1 [Homo sapiens]
gi|311347272|gb|ADP90581.1| ribonuclease H1 [Homo sapiens]
gi|311347274|gb|ADP90582.1| ribonuclease H1 [Homo sapiens]
gi|311347276|gb|ADP90583.1| ribonuclease H1 [Homo sapiens]
gi|311347278|gb|ADP90584.1| ribonuclease H1 [Homo sapiens]
gi|311347280|gb|ADP90585.1| ribonuclease H1 [Homo sapiens]
gi|311347282|gb|ADP90586.1| ribonuclease H1 [Homo sapiens]
gi|311347284|gb|ADP90587.1| ribonuclease H1 [Homo sapiens]
gi|311347286|gb|ADP90588.1| ribonuclease H1 [Homo sapiens]
gi|311347288|gb|ADP90589.1| ribonuclease H1 [Homo sapiens]
gi|311347290|gb|ADP90590.1| ribonuclease H1 [Homo sapiens]
gi|311347292|gb|ADP90591.1| ribonuclease H1 [Homo sapiens]
gi|311347294|gb|ADP90592.1| ribonuclease H1 [Homo sapiens]
gi|311347296|gb|ADP90593.1| ribonuclease H1 [Homo sapiens]
gi|311347298|gb|ADP90594.1| ribonuclease H1 [Homo sapiens]
gi|311347300|gb|ADP90595.1| ribonuclease H1 [Homo sapiens]
gi|311347302|gb|ADP90596.1| ribonuclease H1 [Homo sapiens]
gi|311347304|gb|ADP90597.1| ribonuclease H1 [Homo sapiens]
gi|311347306|gb|ADP90598.1| ribonuclease H1 [Homo sapiens]
gi|311347308|gb|ADP90599.1| ribonuclease H1 [Homo sapiens]
gi|311347310|gb|ADP90600.1| ribonuclease H1 [Homo sapiens]
gi|311347312|gb|ADP90601.1| ribonuclease H1 [Homo sapiens]
gi|311347314|gb|ADP90602.1| ribonuclease H1 [Homo sapiens]
gi|311347316|gb|ADP90603.1| ribonuclease H1 [Homo sapiens]
gi|311347318|gb|ADP90604.1| ribonuclease H1 [Homo sapiens]
gi|311347320|gb|ADP90605.1| ribonuclease H1 [Homo sapiens]
gi|311347322|gb|ADP90606.1| ribonuclease H1 [Homo sapiens]
gi|311347324|gb|ADP90607.1| ribonuclease H1 [Homo sapiens]
gi|311347326|gb|ADP90608.1| ribonuclease H1 [Homo sapiens]
gi|311347328|gb|ADP90609.1| ribonuclease H1 [Homo sapiens]
gi|311347330|gb|ADP90610.1| ribonuclease H1 [Homo sapiens]
gi|311347332|gb|ADP90611.1| ribonuclease H1 [Homo sapiens]
gi|311347334|gb|ADP90612.1| ribonuclease H1 [Homo sapiens]
gi|311347336|gb|ADP90613.1| ribonuclease H1 [Homo sapiens]
Length = 286
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNG 336
+L T AE A +A++ + N++++ TDS + + KN K++
Sbjct: 175 RLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTINGITNWVQGWKKNGWKTSA 234
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ + F AL L + + ++++ V GH+G GNE DRLA+E A+ ++
Sbjct: 235 GKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREGAKQSE 285
>gi|154273475|ref|XP_001537589.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415197|gb|EDN10550.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 307
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 23 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 82
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE D LAK T
Sbjct: 83 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADPLAKRAVSST 135
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 136 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 194
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 195 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 248
>gi|18157558|gb|AAL62030.1|AF382822_1 pol protein [Simian immunodeficiency virus]
Length = 579
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 280 NSGTFKLKNF--ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
N G ++ K+ T AE +A+ ALK + +V I+TDS+ + L+ + +
Sbjct: 191 NRGRYRSKDLENTTNQQAELWAVDLALKDSGA----QVNIVTDSQYVMGVLQGLPDQSDS 246
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
P ++ I + L+ ++ WV H GI GNE VD+L + R
Sbjct: 247 P--IVEQIIQKLTQ----KTAIYLAWVPAHKGIGGNEEVDKLVSKNIR 288
>gi|156065811|ref|XP_001598827.1| hypothetical protein SS1G_00916 [Sclerotinia sclerotiorum 1980]
gi|154691775|gb|EDN91513.1| hypothetical protein SS1G_00916 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1179
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 18/150 (12%)
Query: 349 LSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQH 408
L H I VR WV GH I GNE D+ AKE + P P+ + + ++
Sbjct: 991 LPHTSPGKIRVR--WVPGHLDIPGNEIADKAAKEGTK-------LPFPLNPICTLASLKR 1041
Query: 409 EIQWRENVMSQ---NNNKGLFYKNL-FTITDKKPWFA-KAIPLRKFIVTFNRLRSNHAIC 463
I+ R N + N +YK+L F T + K L + +RS H
Sbjct: 1042 MIRTRANKADEQLWNTVSPQYYKDLQFNHTSNTDTLSLKRATLHHILA----IRSQHGDF 1097
Query: 464 QAYLHKINIAPTNLCQECLEREDMAHIILC 493
AY + N ++ C +R+ H C
Sbjct: 1098 AAYHERFNHTTAHVHCSCGKRKTPLHFFFC 1127
>gi|156053530|ref|XP_001592691.1| hypothetical protein SS1G_05611 [Sclerotinia sclerotiorum 1980]
gi|154703393|gb|EDO03132.1| hypothetical protein SS1G_05611 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 694
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 18/150 (12%)
Query: 349 LSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQH 408
L H I VR WV GH I GNE D+ AKE + P P+ + + ++
Sbjct: 506 LPHTSPGKIRVR--WVPGHLDIPGNEIADKAAKEGTK-------LPFPLNPICTLASLKR 556
Query: 409 EIQWRENVMSQ---NNNKGLFYKNL-FTITDKKPWFA-KAIPLRKFIVTFNRLRSNHAIC 463
I+ R N + N +YK+L F T + K L + +RS H
Sbjct: 557 MIRTRANKADEQLWNTVSPQYYKDLQFNHTSNTDTLSLKRATLHHILA----IRSQHGDF 612
Query: 464 QAYLHKINIAPTNLCQECLEREDMAHIILC 493
AY + N ++ C +R+ H C
Sbjct: 613 AAYHERFNHTTAHVHCSCGKRKTPLHFFFC 642
>gi|170743350|ref|YP_001772005.1| ribonuclease H [Methylobacterium sp. 4-46]
gi|168197624|gb|ACA19571.1| ribonuclease H [Methylobacterium sp. 4-46]
Length = 223
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 20/27 (74%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
VR++WVRGHAG GNE DRLA E R
Sbjct: 113 VRWVWVRGHAGEEGNERADRLAAEGRR 139
>gi|154274369|ref|XP_001538036.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415644|gb|EDN10997.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1174
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 897 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 956
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 957 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 1009
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V +R V + R+ +Y+ + KA
Sbjct: 1010 AAPAYGLEATPT-VSGIRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 1068
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1069 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1122
>gi|3043447|emb|CAA11835.1| RNase HII [Homo sapiens]
Length = 286
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNG 336
+L T AE A +A++ + N++++ TDS + + KN K++
Sbjct: 175 RLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTINGITNWVRGWKKNGWKTSA 234
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ + F AL L + + ++++ V GH+G GNE DRLA+E A+ ++
Sbjct: 235 GKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREGAKQSE 285
>gi|357613252|gb|EHJ68402.1| putative polyprotein [Danaus plexippus]
Length = 709
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 50 PMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVKVIQM 109
P Q+G L G +GC + L +D +K + ++V WIDL A+ + HE M+ ++
Sbjct: 13 PNHQKGFLPGISGCLEHNTLLSESLKDARKSERQITVCWIDLENAFGSIQHELMLFALRW 72
Query: 110 Y 110
Y
Sbjct: 73 Y 73
>gi|242825331|ref|XP_002488418.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712236|gb|EED11662.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1110
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 291 TIFTAEAFAILQALKYVSSIKE-----NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDI 345
T++ E I AL+ + + +E I TD+++ + +S+G +++ I
Sbjct: 924 TVYAGELEGIDAALEILLRSQPCDDNPHEATIYTDNQAAIRATCQPGRSSGQ--YILRRI 981
Query: 346 FKALSHLQE----WNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
+ L L++ W VR WV GH G+ GNE D+LAK A
Sbjct: 982 VRHLGLLRDNRSRWR--VRLQWVPGHEGVPGNEKADQLAKLAA 1022
>gi|189201878|ref|XP_001937275.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187984374|gb|EDU49862.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 161
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 5/140 (3%)
Query: 358 SVRFIWVRGHAGIAGNEAVDRLAKETAR---GTDALNPYPIPVQDVRAVTDMQHEIQWRE 414
S+ W GH + GNE D LAKE A+ T + ++ + + ++++
Sbjct: 20 SIHLQWAPGHNDVKGNEKADTLAKEAAKERPTTSTIASLAYLGTEINKIQKTEQLMEYKR 79
Query: 415 NVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAP 474
N+ + + T K P R+ F L+ H +Y + N
Sbjct: 80 YTDRPTKNRSSYLRIFKLNTHTTIKVPKGTP-REISSAFYSLKLGHGYFNSYFKRFNKRD 138
Query: 475 TNLCQECLEREDMAHIILCC 494
NLC C + + H++L C
Sbjct: 139 CNLCI-CYKPQTPQHLLLDC 157
>gi|342867606|gb|EGU72508.1| hypothetical protein FOXB_16983 [Fusarium oxysporum Fo5176]
Length = 1080
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 92/235 (39%), Gaps = 22/235 (9%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKEN--EVIIITDSKSCLEKLKN 330
IFD G+ +L + A +F EA L+ L+ ++E+ E I I CL+ L
Sbjct: 828 IFD------GSGRLGS-AEVFDVEATGALEGLRAALDVRESVTENIFI-----CLDNLAV 875
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
+ G PS +F L ++ WV H+ + GNE D+LAK + +
Sbjct: 876 ATCLRGTPSDSSQGVFLEFQALAASRGAIHVRWVPEHSDVPGNEQADKLAKAASSLPEPE 935
Query: 391 NPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFI 450
P + +R + Q + E S + + NL T P ++P R +
Sbjct: 936 GARPT-LAYLRRIA-RQKPKEAFEAWWSTSAPEHYKRLNLKATTGSPPEL--SLP-RAAL 990
Query: 451 VTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC---CPKYQVTLA 502
RS H AY + + L C R+ HI C P +++ LA
Sbjct: 991 HHLLAARSLHGDFAAYHERFDHVDARLVCSCGRRKAPDHIFYCRKIPPHHRMRLA 1045
>gi|87137469|gb|ABD27950.1| pol protein [Simian immunodeficiency virus]
Length = 296
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 275 DTQNKNSGTFKLKNFATIFTAE----AFAILQALKYVSSIKENEVIIITDSKSCLEKLKN 330
+T+ +G + I T E A LQA++ E++V I+TDS+ L ++
Sbjct: 3 ETKKGKAGYISDRGRQKIITLEDTTNQQAELQAVQMALQDSESQVNIVTDSQYVLGIIQ- 61
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
S+ + + + L+ I + L ++ IS WV H GI GNE VD+L R
Sbjct: 62 -SQPDHSEAALVTQIIEELVKKEKIYIS----WVPAHKGIGGNEQVDKLVSTGVR 111
>gi|60102723|gb|AAX14029.1| reverse transcriptase [Monascus pilosus]
Length = 1147
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 19/26 (73%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETA 384
VR WV GH GIAGNE DRLAK+ A
Sbjct: 959 VRVSWVPGHTGIAGNELADRLAKQGA 984
>gi|555799|gb|AAB09310.1| polymerase, partial [Feline immunodeficiency virus]
Length = 1123
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE A+L ALK S E+ IITDS+ L + N P L+ +++ + E
Sbjct: 632 AEVQALLLALKAGSE----EMNIITDSQYILNII------NQQPD-LMEGLWQEVLEEME 680
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRL 379
I++ WV GH GI GNE VD+L
Sbjct: 681 KKIAIFIDWVPGHKGIPGNEEVDKL 705
>gi|154287968|ref|XP_001544779.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408420|gb|EDN03961.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 787
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 510 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 569
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 570 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 622
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 623 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 681
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 682 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 735
>gi|88174658|gb|ABD39402.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ +K + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSELEVNIVTDSQYALGIIQ--AKPDKSESELVSQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSNGIR 712
>gi|83584381|gb|ABC24966.1| reverse transcriptase [Monascus pilosus]
Length = 1183
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 19/26 (73%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETA 384
VR WV GH GIAGNE DRLAK+ A
Sbjct: 995 VRVSWVPGHTGIAGNELADRLAKQGA 1020
>gi|353238691|emb|CCA70629.1| related to ribonuclease H1 [Piriformospora indica DSM 11827]
Length = 448
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 295 AEAFAILQALKYV-----------SSIKENEVIIITDSKSCLE--------------KLK 329
AE AI++AL+ S ++ II TDS+ ++ +L
Sbjct: 245 AELIAIIRALETAPSEEALSPVAASKKRKTRWIIRTDSRYSIQVATEWAPKWERNNWRLA 304
Query: 330 NTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
+ ++ P ++ AL L+ + V+F WVRGH G GNEA DRLA
Sbjct: 305 SGQEAKNVP---LIQYLMALLDLRGMDEPVKFEWVRGHQGDVGNEAADRLA 352
>gi|154271392|ref|XP_001536549.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409219|gb|EDN04669.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1276
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 963 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 1022
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 1023 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 1075
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 1076 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRPTVEYQVKA 1134
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1135 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1188
>gi|154271390|ref|XP_001536548.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409218|gb|EDN04668.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 543
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 266 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 325
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 326 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 378
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 379 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 437
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 438 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 491
>gi|83584378|gb|ABC24964.1| reverse transcriptase [Monascus pilosus]
Length = 1181
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 19/26 (73%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETA 384
VR WV GH GIAGNE DRLAK+ A
Sbjct: 993 VRVSWVPGHTGIAGNELADRLAKQGA 1018
>gi|268573648|ref|XP_002641801.1| C. briggsae CBR-RNH-1.0 protein [Caenorhabditis briggsae]
Length = 266
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNGNPSHL 341
AT E A+ +AL+ ++++ TDS ++ + + K+ L
Sbjct: 158 ATNNRGELIAVEKALEKAIEKGLTKLVVKTDSNLLVQSINIWIHGWKRKGWKTATGSDVL 217
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
D+ + +L++ + V+F+ VRGHAG+ GNE D+LA++ A
Sbjct: 218 NKDVLVKIDNLRQ-KLKVKFMHVRGHAGVDGNEKADKLARKGA 259
>gi|312601858|gb|ADQ92486.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 634 LQAIHLALQDSEREVNIVTDSQYALGIIQ--AQPDKSESELVSKIIEQLIQKER----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEKVDKLVSAGIR 712
>gi|87137465|gb|ABD27948.1| pol protein [Simian immunodeficiency virus]
gi|87137467|gb|ABD27949.1| pol protein [Simian immunodeficiency virus]
Length = 296
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ E++V I+TDS+ L ++ S+ + + + L+ I + L ++ IS
Sbjct: 31 AELQAVQMALQDSESQVNIVTDSQYVLGIIQ--SQPDHSEAALVTQIIEELVKKEKIYIS 88
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 89 ----WVPAHKGIGGNEQVDKLVSTGVR 111
>gi|392571761|gb|EIW64933.1| hypothetical protein TRAVEDRAFT_85091, partial [Trametes versicolor
FP-101664 SS1]
Length = 343
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 361 FIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIP 396
F WV+GH+G+ GNE DRLA E A+ + P +P
Sbjct: 38 FKWVKGHSGVRGNEEADRLASEGAKHPPTVRPTHLP 73
>gi|343417815|emb|CCD19921.1| reverse transcriptase (RNA-dependent DNA polymerase) [Trypanosoma
vivax Y486]
Length = 404
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 288 NFATIFTAEAFAILQALKYVSSIKE------NEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
+ A + AE A+ LK + + E V+ TDS S L L NT + + +
Sbjct: 48 SLACSYRAECVAMEAGLKRLVDVMELSKTHRTRVVAFTDSLSLLMAL-NTGPAAVEDA-I 105
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
+ I+ + H+ +SV F +V H G+ NEA D+ A++ G YP + D+
Sbjct: 106 LRRIWDLILHIVRLRVSVNFQFVFSHCGVPRNEAADKAAEQ---GNAKPQSYPAWITDI- 161
Query: 402 AVTDMQHEIQ------WRENVMSQNNNKGLF 426
VT ++ +++ + E M++ + L
Sbjct: 162 -VTGVERQVRNEMYKAFEEGRMTRTHRSALL 191
>gi|254691751|gb|ACT79339.1| pol protein [Simian immunodeficiency virus]
Length = 296
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 280 NSGTFKLKNF--ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
N G ++ K+ T AE +A+ ALK + +V I+TDS+ + L+ + +
Sbjct: 14 NRGRYRSKDLENTTNQQAELWAVDLALKDSGA----QVNIVTDSQYVMGVLQGLPDQSDS 69
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
P ++ I + L+ ++ WV H GI GNE VD+L + R
Sbjct: 70 P--IVEQIIQKLTQ----KTAIYLAWVPAHKGIGGNEEVDKLVSKNIR 111
>gi|60102699|gb|AAX14028.1| reverse transcriptase [Monascus pilosus]
Length = 1147
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 19/26 (73%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETA 384
VR WV GH GIAGNE DRLAK+ A
Sbjct: 959 VRVSWVPGHTGIAGNELADRLAKQGA 984
>gi|83584387|gb|ABC24970.1| reverse transcriptase [Monascus pilosus]
Length = 1181
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 19/26 (73%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETA 384
VR WV GH GIAGNE DRLAK+ A
Sbjct: 993 VRVSWVPGHTGIAGNELADRLAKQGA 1018
>gi|83584384|gb|ABC24968.1| reverse transcriptase [Monascus pilosus]
Length = 1181
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 19/26 (73%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETA 384
VR WV GH GIAGNE DRLAK+ A
Sbjct: 993 VRVSWVPGHTGIAGNELADRLAKQGA 1018
>gi|254691745|gb|ACT79336.1| pol protein [Simian immunodeficiency virus]
Length = 293
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 280 NSGTFKLKNF--ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
+ G +K + T AE +A+ ALK S +V I+TDS+ + L+ + +
Sbjct: 13 DRGRYKTRELENTTNQQAELWAVDLALKDSGS----QVNIVTDSQYAMGVLQGMPDQSDS 68
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
P L+ +I + L +V WV H GI GNE VD+L + R
Sbjct: 69 P--LVEEIIQKLMQKN----AVYLAWVPAHKGIGGNEEVDKLVSKNIR 110
>gi|294934891|ref|XP_002781258.1| hypothetical protein Pmar_PMAR013589 [Perkinsus marinus ATCC 50983]
gi|239891662|gb|EER13053.1| hypothetical protein Pmar_PMAR013589 [Perkinsus marinus ATCC 50983]
Length = 181
Score = 41.6 bits (96), Expect = 1.4, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 284 FKLKNFATIFTAEAFAILQALKYV-------SSIKENEVIIITDSKSCLEKLKNTSKSNG 336
F L +++ AE AI +AL+Y + I +DS++ L+ + +T ++
Sbjct: 62 FCLDPANSVYQAEVVAIREALRYALEELIPGEGSHHRRIEIFSDSEAALKSINSTRRTK- 120
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
L +I E SVRF W+ H+ + NE DRLA
Sbjct: 121 ----LTEEIELLYRKCDELGASVRFNWICSHSNVYYNEVADRLA 160
>gi|325660719|ref|ZP_08149348.1| hypothetical protein HMPREF0490_00080 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325473026|gb|EGC76235.1| hypothetical protein HMPREF0490_00080 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 293
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 77 CKKKYKNLSVAWIDLLK---AYDNCPHEWMVKVIQMYKIDLKSATFCVFCV--FHGRRLV 131
C KKY + SV + +L Y C +M+ I++ L AT H + +
Sbjct: 154 CAKKYPSFSVGKVSILMNIFVYGIC---FMIFDIEITVYSLIYATVMAMTCDRVHVQNIS 210
Query: 132 IVMSDFNNSDGEDITMSGDCPRDKRGIPPDPGKGSGNATQDDGDQYESAPEYAKQNCFLN 191
+ + F DG D + + +RG+ GKGS T++D + +QN
Sbjct: 211 LSVMIFTKKDGVDQAIMNEM---RRGVTEWEGKGS--YTKEDSKVFVVMISKYEQNEITR 265
Query: 192 EVKDKWPNAYLIFTDGSK 209
V + PNA++IFT+G+K
Sbjct: 266 IVSEIDPNAFMIFTEGAK 283
>gi|254691757|gb|ACT79342.1| pol protein [Simian immunodeficiency virus]
Length = 296
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 280 NSGTFKLKNF--ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
N G ++ K+ T AE +A+ ALK + +V I+TDS+ + L+ + +
Sbjct: 14 NRGRYRSKDLENTTNQQAELWAVDLALKDSGA----QVNIVTDSQYVMGVLQGLPDQSDS 69
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
P ++ I + L+ ++ WV H GI GNE VD+L + R
Sbjct: 70 P--IVEQIIQKLTQ----KTAIYLAWVPAHKGIGGNEEVDKLVSKNIR 111
>gi|452821851|gb|EME28876.1| ribonuclease HI [Galdieria sulphuraria]
Length = 280
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 22/140 (15%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI-----KENEV 315
G C ++ D ++N L T AE A++ AL+ V E E+
Sbjct: 130 GSCSAKAGYGVYFGDGDSRNISRPLLGQVQTNQRAELSAMIAALESVCKEPIVYESEAEI 189
Query: 316 IIITDSK--------SCLE--KLKNTSKSNGNPSHLILDIFKALSHL-----QEWNISVR 360
I TDS+ LE KL + + G +L D+ + L +L Q+ +
Sbjct: 190 YIYTDSRYVKDILTAGWLEQWKLNHWKRKVGELKNL--DLIQRLDYLWNKVHQQSKAKIE 247
Query: 361 FIWVRGHAGIAGNEAVDRLA 380
+WV+GH G+ GNE DRLA
Sbjct: 248 IVWVKGHDGLKGNEEADRLA 267
>gi|411117493|ref|ZP_11389980.1| ribonuclease HI [Oscillatoriales cyanobacterium JSC-12]
gi|410713596|gb|EKQ71097.1| ribonuclease HI [Oscillatoriales cyanobacterium JSC-12]
Length = 161
Score = 41.6 bits (96), Expect = 1.4, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 297 AFAILQALKY---VSSIKENEVIIITDSKSCLEKLK-NTSKSNGNPSHLILDIFKALSHL 352
A A LQALK+ V+ +++ ++ +K +K + N K N + + D+++ L L
Sbjct: 57 AIAGLQALKFPCKVTLYSDSQYVVNAMTKGWAKKWRANGWKRNKTENAVNPDLWEQLLEL 116
Query: 353 QEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
E + V F WVRGHAG NE D LA A+ +D L
Sbjct: 117 CEKH-DVTFKWVRGHAGNLENERCDVLAVAAAKQSDLL 153
>gi|327295675|ref|XP_003232532.1| RNase H domain-containing protein [Trichophyton rubrum CBS 118892]
gi|326464843|gb|EGD90296.1| RNase H domain-containing protein [Trichophyton rubrum CBS 118892]
Length = 381
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNP---SHLI 342
AE AI +AL K +V I TDSK ++ + N S P LI
Sbjct: 257 AELTAISRALDIAP--KHRDVTIFTDSKYSIDCVTVWCINWQRNNWVTSTQKPVENKDLI 314
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
I + + + F WV+GH AGNEA DRLA
Sbjct: 315 QAILSKIEERKSLKVKTLFEWVKGHNKDAGNEAADRLA 352
>gi|451168577|gb|AGF31241.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|451168559|gb|AGF31226.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|93210686|gb|ABF00662.1| pol protein [Human immunodeficiency virus 1]
Length = 991
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQALK +EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 622 LQALKLALQDSGSEVNIVTDSQYVLGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 675
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L + R
Sbjct: 676 LSWVPAHKGIGGNEQVDKLVSKGIR 700
>gi|451168647|gb|AGF31299.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|451168583|gb|AGF31246.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|390602854|gb|EIN12246.1| ribonuclease H-like protein, partial [Punctularia strigosozonata
HHB-11173 SS5]
Length = 130
Score = 41.6 bits (96), Expect = 1.5, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 360 RFIWVRGHAGIAGNEAVDRLAKETA 384
RFIW++GH+G G +A DRLAKE A
Sbjct: 106 RFIWIKGHSGNVGGDAADRLAKEGA 130
>gi|212382776|gb|ACJ25696.1| pol protein [Human immunodeficiency virus 1]
Length = 715
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 264 KVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKS 323
+ S+ L F TQN ++ + ++ I Q + +K EV I+TDS+
Sbjct: 312 QASMTRILEPFRTQNPEIVIYQYMD--DLYVGSDLEIGQHRARIEELKGPEVNIVTDSQY 369
Query: 324 CLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKET 383
L ++ ++ + + S L+ I + L + V WV H GI GNE VD+L
Sbjct: 370 ALGIIQ--AQPDKSESELVNQIIEQLIQKER----VYLSWVPAHKGIGGNEQVDKLVSSG 423
Query: 384 AR 385
R
Sbjct: 424 IR 425
>gi|451168641|gb|AGF31294.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|451168630|gb|AGF31285.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|451168565|gb|AGF31231.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|154279334|ref|XP_001540480.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412423|gb|EDN07810.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 666
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 389 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 448
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 449 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 501
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 502 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 560
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 561 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 614
>gi|88856591|ref|ZP_01131248.1| ribonuclease H [marine actinobacterium PHSC20C1]
gi|88814245|gb|EAR24110.1| ribonuclease H [marine actinobacterium PHSC20C1]
Length = 173
Score = 41.6 bits (96), Expect = 1.5, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 272 WIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLE----- 326
W D +G +K AT E A+LQ + + + +++++I+ DS+ +
Sbjct: 22 WYVDDNTWAAGGWK---HATNNQGELMAVLQLFRSTAHV-DDDLLILCDSQYVINSVTKW 77
Query: 327 ----KLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
K K KS+G P + +D+ K + + RF WVRGH G NEA D A+
Sbjct: 78 MPGWKKKGWRKSDGKPV-MNVDLLKQIDEAITGRL-YRFEWVRGHVGHPLNEAADVRARG 135
Query: 383 TARG 386
A
Sbjct: 136 AAEA 139
>gi|451168635|gb|AGF31289.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|451168600|gb|AGF31260.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|212538803|ref|XP_002149557.1| reverse transcriptase, putative [Talaromyces marneffei ATCC 18224]
gi|210069299|gb|EEA23390.1| reverse transcriptase, putative [Talaromyces marneffei ATCC 18224]
Length = 1254
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 30/218 (13%)
Query: 293 FTAEAFAILQALKYVS-SIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSH 351
+TAE AI +L+ + + + I++ ++S L + + +G S I I+K + +
Sbjct: 989 YTAELEAIATSLERIPWQTYQRCIFILSSNRSALSAISQPRQQSGQES--IQRIYKRVQY 1046
Query: 352 LQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR-GTDALNPYPIPVQDVR------AVT 404
LQ+ +V IW+ H+ + AV + AK AR T +P P + A+
Sbjct: 1047 LQQQGNAVVTIWIPTHSDM----AVKQQAKAEARKATRVESPPEKPPHQAKSTAIRLALA 1102
Query: 405 DMQHEIQWRENVMSQNNN-----KGLFYKNLFTITDKKPWFAKAIPLRKFIVTFNRLRSN 459
+ Q E E+V + G +NL+ + RK +LR+
Sbjct: 1103 ERQQEWTLPEHVGRYSRTVDIALPGKHTRNLYNRLN-----------RKEAKILAQLRTG 1151
Query: 460 HAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKY 497
+YL++I +N C E + H + C ++
Sbjct: 1152 MTRLNSYLYRIGAVDSNRCACGQASETIEHFLFRCTQW 1189
>gi|154282135|ref|XP_001541880.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412059|gb|EDN07447.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 844
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 567 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 626
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 627 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 679
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 680 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 738
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 739 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 792
>gi|451168253|gb|AGF30958.1| pol protein, partial [Human immunodeficiency virus 1]
gi|451168606|gb|AGF31265.1| pol protein, partial [Human immunodeficiency virus 1]
gi|451168612|gb|AGF31270.1| pol protein, partial [Human immunodeficiency virus 1]
gi|451168624|gb|AGF31280.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|85700664|gb|ABC74766.1| pol protein [Human immunodeficiency virus 1]
Length = 719
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 264 KVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKS 323
+ S+ L F TQN ++ + ++ I Q + +K EV I+TDS+
Sbjct: 315 QASMTRILEPFRTQNPEIVIYQYMD--DLYVGSDLEIGQHRARIEELKGPEVNIVTDSQY 372
Query: 324 CLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKET 383
L ++ ++ + + S L+ I + L + V WV H GI GNE VD+L
Sbjct: 373 ALGIIQ--AQPDKSESELVNQIIEQLIQKER----VYLSWVPAHKGIGGNEQVDKLVSSG 426
Query: 384 AR 385
R
Sbjct: 427 IR 428
>gi|45552509|ref|NP_995777.1| ribonuclease H1, isoform B [Drosophila melanogaster]
gi|45445652|gb|AAS64899.1| ribonuclease H1, isoform B [Drosophila melanogaster]
Length = 314
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILD 344
E A + A+K + ++ I TDS+ + K ++ N P ++D
Sbjct: 207 VGEIQAAIHAIKTALDLGIQKLCISTDSQFLINSITLWVAGWKKRDWKLKNNQPVKNVVD 266
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
+ LQE NI+V++ +V H GI GNE D+LA++
Sbjct: 267 FKELDKLLQENNITVKWNYVEAHKGIEGNEMADKLARQ 304
>gi|363420063|ref|ZP_09308158.1| ribonuclease HI [Rhodococcus pyridinivorans AK37]
gi|359736169|gb|EHK85117.1| ribonuclease HI [Rhodococcus pyridinivorans AK37]
Length = 176
Score = 41.6 bits (96), Expect = 1.5, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILDI 345
AE A+L+AL+ + +II +DS+ ++ K K + G P L++
Sbjct: 46 AELRAVLEALR--AHPGAEPMIIESDSQYAIKCASEWLPGWKRKGWKTATGAPVK-NLEL 102
Query: 346 FKALS-HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPV 397
+A+ L + VRF WVRGH G NE D LA + AR A P PI V
Sbjct: 103 VRAIDRELTDRTGPVRFRWVRGHVGNHFNEMADTLAGQAAREI-AAKPGPIEV 154
>gi|256824793|ref|YP_003148753.1| RNase HI [Kytococcus sedentarius DSM 20547]
gi|256688186|gb|ACV05988.1| RNase HI [Kytococcus sedentarius DSM 20547]
Length = 291
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 19/114 (16%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILDIF 346
E A+L L+ + + ++++ ++ DS+ + K K K++G P + +D+
Sbjct: 42 ELMAVLDLLQQTAHL-DDDLHVLCDSQYAINVISKWTPAWKRKGWKKADGKPV-MNIDLV 99
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA----RGTDALNPYPIP 396
KAL + V F WV+GHAG A NEA D A+ A RG + P P P
Sbjct: 100 KALDEAMQ-GRRVTFEWVKGHAGHALNEAADERARNAALAHQRGAE---PDPGP 149
>gi|194220992|ref|XP_001502934.2| PREDICTED: ribonuclease H1-like [Equus caballus]
Length = 359
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKN---TSKSNGNPSH 340
+L T AE A +A++ + N++++ TDS + + N K NG +
Sbjct: 242 IRLPGRQTNQRAEIHAACKAIEQAKAQNINKLVLYTDSMFTINGITNWVQGWKKNGWRTS 301
Query: 341 LILDI-----FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
++ F L L + + ++++ V GH+G AGNE DRLA+E A+ ++
Sbjct: 302 TGKEVTNKEDFVELDRLTQ-GMDIQWMHVPGHSGFAGNEEADRLAREGAKQSE 353
>gi|451168553|gb|AGF31221.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|395852160|ref|XP_003798608.1| PREDICTED: ribonuclease H1 [Otolemur garnettii]
Length = 287
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKN---TSKSNGNPSH 340
+L T AE A +A++ + N++++ TDS + + N K NG +
Sbjct: 175 IRLPGRQTNQRAEIHAACKAIEQAKAQNINKLVLYTDSMFTINGITNWVQGWKKNGWRTS 234
Query: 341 LILDI-----FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
++ F AL L + ++ ++++ + GH+G GNE DRLA+E A+
Sbjct: 235 TGKEVINKEDFMALEELTQ-DMDIQWMHIPGHSGFTGNEEADRLAREGAK 283
>gi|391380027|gb|AFM44623.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSESEVNIVTDSQYALGIIQ--AQPDRSESELVNQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSSGIR 712
>gi|154281239|ref|XP_001541432.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411611|gb|EDN06999.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1183
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 906 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 965
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 966 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 1018
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 1019 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRPTVEYQVKA 1077
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1078 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1131
>gi|17137476|ref|NP_477315.1| ribonuclease H1, isoform A [Drosophila melanogaster]
gi|7304133|gb|AAF59170.1| ribonuclease H1, isoform A [Drosophila melanogaster]
gi|19527995|gb|AAL90112.1| AT19436p [Drosophila melanogaster]
gi|220949756|gb|ACL87421.1| rnh1-PA [synthetic construct]
gi|220958970|gb|ACL92028.1| rnh1-PA [synthetic construct]
Length = 333
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILD 344
E A + A+K + ++ I TDS+ + K ++ N P ++D
Sbjct: 226 VGEIQAAIHAIKTALDLGIQKLCISTDSQFLINSITLWVAGWKKRDWKLKNNQPVKNVVD 285
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
+ LQE NI+V++ +V H GI GNE D+LA++
Sbjct: 286 FKELDKLLQENNITVKWNYVEAHKGIEGNEMADKLARQ 323
>gi|242798560|ref|XP_002483195.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218716540|gb|EED15961.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 574
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 292 IFTAEAFAILQALKYVSSIKE-NEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+F AE + AL++ + + + D+++ + +LK+T G L+L +A
Sbjct: 406 VFDAELVGVAIALEWALGRQLLGPIWVFLDAQNAINRLKSTRPGPGK--GLVLRAHRAAK 463
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
L V WV GH+GI GNE D+ AK A
Sbjct: 464 KLAMRGQLVTIQWVPGHSGIEGNERADQAAKRAA 497
>gi|154277650|ref|XP_001539663.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413248|gb|EDN08631.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1411
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 1134 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 1193
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 1194 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 1246
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 1247 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 1305
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1306 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLMLC 1359
>gi|154287920|ref|XP_001544755.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408396|gb|EDN03937.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 787
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 510 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 569
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 570 VRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 622
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 623 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 681
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 682 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 735
>gi|322785948|gb|EFZ12565.1| hypothetical protein SINV_04271 [Solenopsis invicta]
Length = 315
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTS 332
+ D + ++ ++ N IFT EA I AL+ S+ + I +DS+S L +
Sbjct: 129 VVDISHDHAYCYRTLNEVFIFTCEAMTIFSALRLASNSPSKRISIFSDSRSVLRAFLLSK 188
Query: 333 KSNGNPSHLILDIFKAL 349
KS N +LIL I +
Sbjct: 189 KSRKNSPYLILSILHTI 205
>gi|240137443|ref|YP_002961914.1| ribonuclease H (RNase H) [Methylobacterium extorquens AM1]
gi|240007411|gb|ACS38637.1| Ribonuclease H (RNase H) [Methylobacterium extorquens AM1]
Length = 225
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLA----KETARGTDALNPYPIPVQDVRAVTDMQ 407
VR+ WVRGHAG AGNE DRLA +E G + P P A+ Q
Sbjct: 113 VRWTWVRGHAGEAGNERADRLATLGRREALSGKTSGEAVPPPADASPALAPAQ 165
>gi|238635652|gb|ACR52873.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSAGIR 712
>gi|13891872|gb|AAG50315.1| pol polyprotein [Human immunodeficiency virus 1]
Length = 560
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 479 LQAIHLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 532
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 533 LAWVPAHKGIGGNEQVDKLVSAGIR 557
>gi|60418832|gb|AAX19843.1| HIV SAVINE 2 [synthetic construct]
Length = 1887
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMS 418
V WV H GI GNE VD+L R TD NP I ++DV +M W+ +++
Sbjct: 1404 VYLAWVPAHKGIGGNEQVDKLVSAGIRKTDP-NPQEIHLEDVTENFNM-----WKNDMVE 1457
Query: 419 QNNNKG 424
Q + G
Sbjct: 1458 QMHEAG 1463
>gi|82701057|ref|YP_418157.1| putative Ribonuclease HI [Pseudomonas phage EL]
gi|82657962|emb|CAG27218.1| putative Ribonuclease HI [Pseudomonas phage EL]
Length = 163
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDA 389
D+ + L+ L + N V+F WV+GH+G GNE D+LAK+ A +A
Sbjct: 108 DLLEVLNELLKKN-KVKFHWVKGHSGDEGNEKADQLAKDAANNPEA 152
>gi|255984064|gb|ACU46104.1| pol protein [Human immunodeficiency virus 1]
Length = 659
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 578 LQAIHLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 631
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 632 LAWVPAHKGIGGNEQVDKLVSTGIR 656
>gi|156379280|ref|XP_001631386.1| predicted protein [Nematostella vectensis]
gi|156218425|gb|EDO39323.1| predicted protein [Nematostella vectensis]
Length = 272
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNGNPSHLILDIF 346
AE A AL+ + +V I TDSK + + KN K+ N L+ F
Sbjct: 171 AEIVAATMALESAKEMGFTKVEIRTDSKYTINGMTSWIRSWKKNGWKTADNKDVKNLEDF 230
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
+ L L I V + V GHAGI GNE D+LAK A
Sbjct: 231 QKLDKLCS-EIDVHWTHVAGHAGIEGNEIADQLAKGGA 267
>gi|88809994|gb|ABD52331.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 559
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ +EV I+TDS+ L ++ SK + + S L+ I + L + ++ +
Sbjct: 478 LQAIQLALQDSGSEVNIVTDSQYALGIIQ--SKPDKSESELVNQIIEQLINKEK----IY 531
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 532 LAWVPAHKGIGGNEQVDKLVSAGIR 556
>gi|261192988|ref|XP_002622900.1| RNase H domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239589035|gb|EEQ71678.1| RNase H domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239613618|gb|EEQ90605.1| RNase H domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 434
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE------------KLKNTSKSNGNPSHLI 342
AE AI++AL + +V I TDSK + K LI
Sbjct: 289 AELTAIIRALDIAP--RHRDVTIFTDSKYAINCVTVWFVNWQRNKWMTAQDKPVENKDLI 346
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + N+ F WVRGH+ GNEA DRLA A+
Sbjct: 347 QSILMKIEERTVMNVKTLFEWVRGHSRDPGNEAADRLAVNGAK 389
>gi|238635660|gb|ACR52880.1| pol protein [Human immunodeficiency virus 1]
gi|238635698|gb|ACR52913.1| pol protein [Human immunodeficiency virus 1]
gi|357395383|gb|AET76265.1| pol protein, partial [Human immunodeficiency virus 1]
gi|357395479|gb|AET76350.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSAGIR 712
>gi|46203334|ref|ZP_00051665.2| COG0328: Ribonuclease HI [Magnetospirillum magnetotacticum MS-1]
Length = 222
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLA---KETARGTDALNP-YPIPVQDVRA 402
VR+ WVRGHAG GNE DRLA + A G L P +P P + + A
Sbjct: 113 VRWTWVRGHAGEDGNERADRLATLGRREALGQPVLPPAHPAPAERMPA 160
>gi|392569511|gb|EIW62684.1| hypothetical protein TRAVEDRAFT_114981 [Trametes versicolor
FP-101664 SS1]
Length = 110
Score = 41.2 bits (95), Expect = 1.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 455 RLRSNHAICQAYLHKINIAPTNLCQECLER-EDMAHIILCCPKYQVTLAIALVGSGQDAR 513
+ R+N QAY+ +I AP+ C C E E + H +L CP Y + A+ G R
Sbjct: 2 QFRTNRVPLQAYMERIGKAPSATCPTCGEAPETVQHFLLACPTYSLHRAVHFAPLGFSGR 61
Query: 514 LVNG 517
++
Sbjct: 62 TLSA 65
>gi|417398338|gb|JAA46202.1| Putative ribonuclease h1-like protein [Desmodus rotundus]
Length = 284
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKN---TSKSNGNPSHL 341
+L T AE A +A++ + +++++ TDS + + N K NG +
Sbjct: 173 RLPGRQTNQRAEIHAACRAIEQARAQDIDKLVLYTDSMFTINGITNWLQGWKENGWRTST 232
Query: 342 ILDI-----FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
++ F L L + + +R++ V GH+G+ GNE DRLAKE A+ D
Sbjct: 233 GKEVINREDFLELDRLVQ-GMDIRWMHVPGHSGLVGNEEADRLAKEGAKQPD 283
>gi|392569642|gb|EIW62815.1| hypothetical protein TRAVEDRAFT_112710 [Trametes versicolor
FP-101664 SS1]
Length = 131
Score = 41.2 bits (95), Expect = 1.7, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 455 RLRSNHAICQAYLHKINIAPTNLCQECLER-EDMAHIILCCPKYQVTLAIALVGSGQDAR 513
+ R+NH QAYL +I AP+ C C + + + H +L CP Y + A+ G R
Sbjct: 23 QFRTNHVPLQAYLARIGKAPSATCPTCGDAPKTVQHYLLACPTYSLHRAVHFAPLGFSGR 82
Query: 514 ----LVNGGRGFDPTQGF 527
L+N P F
Sbjct: 83 TLAALLNSKAALRPLFNF 100
>gi|343414726|emb|CCD20908.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 1443
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 288 NFATIFTAEAFAILQALKYV------SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
+ A + AE A+ LK + S V+ TDS S L L NT + G +
Sbjct: 699 SLARSYRAECVAMEAGLKRLVDVIQLSKTHRTRVVAFTDSMSLLMAL-NTCHA-GVEDAI 756
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
+ I+ + H+ +SV F +V H G+ NEA D+ A++ G YP + D+
Sbjct: 757 LRRIWDLILHIVRLRVSVNFQFVFSHCGVPPNEAADKAAEQ---GNAKPQSYPAWITDI- 812
Query: 402 AVTDMQHEIQ 411
VT ++ +++
Sbjct: 813 -VTGVERQVR 821
>gi|295314109|gb|ADF97366.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1007
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L + ++
Sbjct: 636 AELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLINKEK---- 689
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VDRL R
Sbjct: 690 VYLSWVPAHKGIGGNEQVDRLVSAGIR 716
>gi|198423486|ref|XP_002128178.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 282
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 19/138 (13%)
Query: 256 KEKEAGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEV 315
K AGY +W D N + +L T AE A+ +A+K + ++
Sbjct: 146 KGSRAGY-------GVWWGDDHKLNF-SARLPGIPTNQRAEIAAVNKAIKQAIDVGHKQL 197
Query: 316 IIITDSK---SCLEKL------KNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRG 366
+I TDSK C+ K K K++G P ++ + L ++++ I+V+F V G
Sbjct: 198 LIRTDSKFVIDCITKWVQGWIRKGWVKADGKPVIHKVEFQEMLKNMKK--INVKFEHVFG 255
Query: 367 HAGIAGNEAVDRLAKETA 384
H G GNE D+LA + A
Sbjct: 256 HRGNYGNEMADKLAVQGA 273
>gi|37677895|gb|AAQ97561.1| Gag protein [Human immunodeficiency virus 1]
Length = 1003
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIRLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSSGIR 712
>gi|289523611|ref|ZP_06440465.1| ribonuclease HI [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503303|gb|EFD24467.1| ribonuclease HI [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 176
Score = 41.2 bits (95), Expect = 1.7, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK---------NT 331
SG F+L + A A L ALK +K + TDS+ + + N
Sbjct: 54 SGGFRLTTNNRMEIYAAIAGLSALKCRCKVK-----LYTDSRYLADAMNKGWVKRWKANG 108
Query: 332 SKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
N L +D+++ L L E + V F+WVRGH G NE D+L+ ARG +
Sbjct: 109 WMRNKKERALNVDLWEQLLRLCEKH-EVEFLWVRGHDGNVENERCDQLSTTAARGKN 164
>gi|238635681|gb|ACR52898.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSAGIR 712
>gi|156055178|ref|XP_001593513.1| hypothetical protein SS1G_04940 [Sclerotinia sclerotiorum 1980]
gi|154702725|gb|EDO02464.1| hypothetical protein SS1G_04940 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1636
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 88/221 (39%), Gaps = 22/221 (9%)
Query: 282 GTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL----KNTSKSNGN 337
G+ L ++ +EA A + LK ++I E I TD CL+ + + SKS G+
Sbjct: 1293 GSLPLGRMKEVYDSEATAAFEGLK--AAISSIESRIATDIYICLDNIEVAARLLSKSTGS 1350
Query: 338 PSHLILDIFKALSHL-QEW-NISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPI 395
D F A L W N +V WV GH +AGNEA D+ AK A Y
Sbjct: 1351 SQ----DTFSAFRQLASTWHNGTVHIRWVPGHKDVAGNEAADKAAKAGAALPQPTGAY-- 1404
Query: 396 PVQDVRAVTDMQHEIQWRENVMSQ--NNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVTF 453
+R VT R+ M+Q + Y++L T + ++P R F+
Sbjct: 1405 SYAGLRRVTK-----GLRQKAMNQLWSTVIPTTYRDLEIFTSPRNPKELSLP-RPFLGRL 1458
Query: 454 NRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCC 494
+RS H +Y + L C R+ H C
Sbjct: 1459 IAIRSGHGDFASYHERFLHQDAQLLCRCGARKSPVHFFFCS 1499
>gi|238917359|ref|YP_002930876.1| ribonuclease HI [Eubacterium eligens ATCC 27750]
gi|238872719|gb|ACR72429.1| ribonuclease HI [Eubacterium eligens ATCC 27750]
Length = 208
Score = 41.2 bits (95), Expect = 1.7, Method: Composition-based stats.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 356 NISVRFIWVRGHAGIAGNEAVDRLAK 381
+I++RF+ VRGH+G+ GNE DRLAK
Sbjct: 177 SINIRFVKVRGHSGVEGNEEADRLAK 202
>gi|37677905|gb|AAQ97570.1| Pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIRLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSSGIR 712
>gi|451168589|gb|AGF31251.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDRSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|333102047|gb|AEF14225.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSEAEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSSGIR 712
>gi|160337084|gb|ABX25830.1| pol protein [Feline immunodeficiency virus]
Length = 1148
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE A+L ALK E+ IITDS+ + LK L+ I++ + E
Sbjct: 657 AEVMALLMALKAGGE----EMNIITDSQYIINVLKQKP-------DLMEGIWQEVIEEME 705
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRL 379
I + WV GH GI GN VD+L
Sbjct: 706 KKIGIFIDWVPGHKGIPGNTEVDQL 730
>gi|37935931|gb|AAO47173.1| pol protein [Human immunodeficiency virus 1]
Length = 1010
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AIL AL+ + +V I+TDS+ L + + + +P ++ I + L+ ++
Sbjct: 629 AELMAILLALQD----SKEQVNIVTDSQYALGIISSQPTQSDSP--IVQQIIEELTKKEQ 682
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE +D+L + R
Sbjct: 683 ----VYLTWVPAHKGIGGNEKIDKLVSKDIR 709
>gi|154271959|ref|XP_001536832.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408819|gb|EDN04275.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1338
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 1061 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 1120
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 1121 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 1173
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 1174 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 1232
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1233 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1286
>gi|313661109|dbj|BAJ41134.1| Pol protein [Human immunodeficiency virus 1]
gi|313661119|dbj|BAJ41143.1| Pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VDRL R
Sbjct: 688 LAWVPAHKGIGGNEQVDRLVSAGVR 712
>gi|254691759|gb|ACT79343.1| pol protein [Simian immunodeficiency virus]
Length = 290
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 280 NSGTFKLKNF--ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGN 337
N G ++ K+ T AE +A+ ALK + +V I+TDS+ + L+ + +
Sbjct: 8 NRGRYRSKDLENTTNQQAELWAVDLALKDSGA----QVNIVTDSQYVMGVLQGLPDQSDS 63
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
P ++ I + L+ ++ WV H GI GNE VD+L + R
Sbjct: 64 P--IVEQIIQKLTR----KTAIYLAWVPAHKGIGGNEEVDKLVSKNIR 105
>gi|154282433|ref|XP_001542012.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410192|gb|EDN05580.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1357
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 1080 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 1139
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
+++++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 1140 IRDSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 1192
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 1193 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 1251
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1252 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1305
>gi|409407219|ref|ZP_11255670.1| ribonuclease HI protein [Herbaspirillum sp. GW103]
gi|386432970|gb|EIJ45796.1| ribonuclease HI protein [Herbaspirillum sp. GW103]
Length = 153
Score = 41.2 bits (95), Expect = 1.9, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILDIF 346
E A++QAL + + EV++ TDS+ + K + ++ P D++
Sbjct: 56 ELMAVIQALNALK--RPCEVVVHTDSQYVQKGISEWIHGWKARGWKTASKEPVK-NADLW 112
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
+AL Q+ + V + WVRGH G AGNE D+LA RG D++
Sbjct: 113 QALDAAQQQH-QVEWRWVRGHNGHAGNERADQLAN---RGVDSI 152
>gi|367041475|ref|XP_003651118.1| hypothetical protein THITE_2111128 [Thielavia terrestris NRRL 8126]
gi|346998379|gb|AEO64782.1| hypothetical protein THITE_2111128 [Thielavia terrestris NRRL 8126]
Length = 327
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSK---SCLEKL-----KNTSKSNGNP---SHLIL 343
AE AIL+AL+ V ++ E I TDSK C+ + KN K++ P L+
Sbjct: 227 AELTAILRALETVDLSQDME--IRTDSKYSIQCVTEWYINWEKNGWKTSTGPVKNQDLVQ 284
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I L + +FIWV+GH GN A DRLA E A+
Sbjct: 285 LIRDRLDARESKGGRTQFIWVKGHDTDVGNIAADRLAVEGAK 326
>gi|154277654|ref|XP_001539665.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413250|gb|EDN08633.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1489
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 24/224 (10%)
Query: 286 LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEKLKNTSKSNGN 337
L + +F AEA +AL K + + E+ ++ + D+ S + ++ ++ ++ N
Sbjct: 1215 LSPMSHVFDAEAVGACRALECTVKLLPCVTEDGSNPQIWLCLDNTSVIWGIRGSAAASSN 1274
Query: 338 PSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDA----LNPY 393
++ + L++ N+ ++ W GH GI GNE DRLAK+ T A L
Sbjct: 1275 WAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKQAVSSTAAPAYGLEAT 1327
Query: 394 PIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP----LRKF 449
P V VR V + R+ +Y+ + KA P R
Sbjct: 1328 PT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKAPPELTMPRHA 1386
Query: 450 IVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
+ + LRS+H Y + A L C + H++LC
Sbjct: 1387 LHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1430
>gi|87137471|gb|ABD27951.1| pol protein [Simian immunodeficiency virus]
Length = 296
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ E++V I+TDS+ L ++ S+ + + + L+ I + L ++ IS
Sbjct: 31 AELQAVQMALQDSESQVNIVTDSQYVLGIIQ--SQPDHSEAALVTQIIEELVKKEKIYIS 88
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE +D+L R
Sbjct: 89 ----WVPAHKGIGGNEQIDKLVSTGVR 111
>gi|37935970|gb|AAO47208.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AIL ALK KE V I+TDS+ L + + + +P ++ I + L+ ++
Sbjct: 628 AELMAILLALK---DSKET-VNIVTDSQFALGIISSQPTQSDSP--IVQQIIEELTKKEQ 681
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE +D+L + R
Sbjct: 682 ----VYLAWVPAHKGIGGNEKIDKLVSKDIR 708
>gi|330919512|ref|XP_003298645.1| hypothetical protein PTT_09418 [Pyrenophora teres f. teres 0-1]
gi|311328058|gb|EFQ93259.1| hypothetical protein PTT_09418 [Pyrenophora teres f. teres 0-1]
Length = 362
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 295 AEAFAILQALKYV-SSIKENE----VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
AE AI ALK+ S ++E V I TDS+ L L +++ S +I AL
Sbjct: 129 AELLAISLALKHAKSQVQEGAEFRLVRIYTDSQRILNSLNDSTPSAQQLGPMIPGEMLAL 188
Query: 350 SHL---QEW----NISVRFIWVRGHAGIAGNEAVDRLA 380
L EW IS +WV+ H GNEA D LA
Sbjct: 189 EVLFDHTEWLHRLGISTELVWVKSHHASNGNEAADALA 226
>gi|242826126|ref|XP_002488578.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712396|gb|EED11822.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 315 VIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNE 374
+ I+++SKS ++ +KN N + +I I ++ L I +R W+ GH GN+
Sbjct: 382 ITILSNSKSAIQAIKNPR--NTSRQRVIEAINQSAYELDSRGIPLRLQWIPGHCDDLGND 439
Query: 375 AVDRLAK 381
A DRLAK
Sbjct: 440 AADRLAK 446
>gi|51980231|gb|AAU20784.1| pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ EV I+TDS+ L ++ ++ N + S L+ I + L ++
Sbjct: 631 AELQAIQLALQDSRPEVNIVTDSQYALGIIQ--AQPNKSESELVNQIIEQLIKKEK---- 684
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 685 VYLSWVPAHKGIGGNEQVDKLVSSGIR 711
>gi|93210784|gb|ABF00750.1| pol protein [Human immunodeficiency virus 1]
gi|212382851|gb|ACJ25729.1| pol protein [Human immunodeficiency virus 1]
Length = 998
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPS 339
+ G KL N T A LQA++ +EV I+TDS+ L ++ ++ + + S
Sbjct: 610 DRGRQKLVNLTE--TTNQKAELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSES 665
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
L+ I + L + + +S WV H GI GNE VD+L + R
Sbjct: 666 ELVNQIIEQLINKERIYLS----WVPAHKGIGGNEQVDKLVSKGVR 707
>gi|443303181|gb|AGC82490.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 947
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
T A LQA++ E EV I+TDS+ L ++ ++ + + S L+ I + L + +
Sbjct: 571 TTNQKAELQAIQLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLINKE 628
Query: 354 EWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 629 R----VYLSWVPAHKGIGGNEQVDKLVSSGIR 656
>gi|308493275|ref|XP_003108827.1| hypothetical protein CRE_11880 [Caenorhabditis remanei]
gi|308247384|gb|EFO91336.1| hypothetical protein CRE_11880 [Caenorhabditis remanei]
Length = 67
Score = 41.2 bits (95), Expect = 2.0, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
D+ + +L++ + V+F+ VRGHAGI GNE D LA++ A+
Sbjct: 25 DVLTKIDNLRQ-KLKVKFVHVRGHAGIDGNEKADELARKGAQ 65
>gi|46254787|gb|AAS86325.1| pol protein [Simian immunodeficiency virus]
Length = 645
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A L+A+K ++V I+TDS+ L + S+ +P ++ DI + L +
Sbjct: 379 AELEAIKLALQDSGSKVNIVTDSQYVLGIISAQPTSSDHP--IVEDIIQLLLGKDQ---- 432
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV GH GI GN VDRL + R
Sbjct: 433 VYITWVPGHKGIGGNVEVDRLVSKDIR 459
>gi|341494588|gb|AEK79318.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ +K + + S L+ I + L + ++
Sbjct: 632 AELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AKPDRSESELVNQIIEQLINKEK---- 685
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 686 VYLSWVPAHKGIGGNEQVDKLVSSGIR 712
>gi|296224561|ref|XP_002758102.1| PREDICTED: ribonuclease H1 [Callithrix jacchus]
Length = 287
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 279 KNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KN 330
KN G +L T AE A +A++ + +++++ TDS + + KN
Sbjct: 171 KNVG-IRLPGRQTNQRAEIHAACKAIEQAKAQNISKLVVYTDSMFTINGITNWVQGWKKN 229
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
K++ + + F AL L + + ++++ V GH+G GNE DRLA+E A+ ++
Sbjct: 230 GWKTSTGKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFMGNEEADRLAREGAKQSE 286
>gi|154276844|ref|XP_001539267.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414340|gb|EDN09705.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 919
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 642 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 701
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 702 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 754
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 755 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 813
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 814 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 867
>gi|154270463|ref|XP_001536086.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409890|gb|EDN05278.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 378
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 24/178 (13%)
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA--------RG----TD 388
++L I +L + V F W+ H GI GNE D+LAKE RG D
Sbjct: 114 ILLRIIDSLERANSQGLDVEFYWIPAHHGIEGNELADKLAKEATGCKQRHGRRGKLITVD 173
Query: 389 ALNPYPIP------VQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAK 442
+ P + R+ + Q + +W + + + F T T
Sbjct: 174 TDDAAATPDFLRHLISAARSELNRQTQERWEHDWEHETTGRATFT---LTPTPSSTVLQL 230
Query: 443 AIPLRKFI-VTFNRLRSNHAICQAYLH--KINIAPTNLCQECLEREDMAHIILCCPKY 497
L K + T ++R+ + +L+ K+ LC+ + + H++L CP++
Sbjct: 231 HDSLHKVLSSTIVQMRTGKIGLRQFLYERKVPDITDTLCECGNGNQTVRHVLLACPRF 288
>gi|2232039|gb|AAB82087.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 288 NFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFK 347
N T AE A+L AL+ + +V I+TDS+ L + +S+ + S ++ I +
Sbjct: 470 NETTNQKAELMAVLLALQ----DSKEKVNIVTDSQYVLGII--SSQPTQSESPIVQQIIE 523
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
L+ ++ V WV H GI GNE +D+L + R
Sbjct: 524 ELTKKEQ----VYLTWVPAHKGIGGNEKIDKLVSKDIR 557
>gi|390597869|gb|EIN07268.1| ribonuclease H-like protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 430
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 344 DIFKALS-HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDA 389
D+ KA + HL + + F+WV+GH+G GNE D LAKE A +A
Sbjct: 97 DLLKATAFHLGRRSATTDFLWVKGHSGEEGNERADALAKEGANKDEA 143
>gi|242815637|ref|XP_002486608.1| hypothetical protein TSTA_105810 [Talaromyces stipitatus ATCC
10500]
gi|218714947|gb|EED14370.1| hypothetical protein TSTA_105810 [Talaromyces stipitatus ATCC
10500]
Length = 485
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 93/226 (41%), Gaps = 26/226 (11%)
Query: 290 ATIFTAEAFAILQALKYV-----SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
+T++ AEA I AL+ +I+ +++I +DS++ L L N +G I D
Sbjct: 164 STVYAAEACGIKFALETTLQIADQNIQTKKLVIFSDSQAALRTLMNPRMVSGQT--YIHD 221
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRL--------AKETARGTDALNPYPIP 396
+L + +I V W+ GH I GNEA DR A+ D N +
Sbjct: 222 CIDSLRKCIDEDIDVTLRWIPGHEDIPGNEAADRAAKRAALIGARRQIVPGDMDNWTILA 281
Query: 397 V---QDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIPLRKFIVT- 452
+ +R T E QW + + K + + T+ + W LRK +
Sbjct: 282 AAAKRRIRQSTKDAWEKQWDKQKAGKPTKKLVPQPSKRTL---QYWTF----LRKATSSI 334
Query: 453 FNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQ 498
+LR+ YL +IN C L + + HI++ CP Y+
Sbjct: 335 LIQLRTERIGLAHYLWRINRREQPYCACGLSGQSVRHILMECPLYE 380
>gi|121645185|gb|ABM63546.1| pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ +K + + S L+ I + L ++ V
Sbjct: 633 LQAINLALQDSGSEVNIVTDSQYALGIIQ--AKPDKSESELVNQIIEQLIKKEK----VY 686
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VDRL R
Sbjct: 687 LSWVPAHKGIGGNEQVDRLVSNGIR 711
>gi|325089740|gb|EGC43050.1| WD40 repeat-containing protein [Ajellomyces capsulatus H88]
Length = 2052
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 331 TSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
+ N + ++ I + + L+ NI VR V GH GN+ D LAKE A +
Sbjct: 1875 SQPGNKSGQQIVHAILRVVKDLESQNIHVRLQCVPGHCNNPGNDTADFLAKEAADPQPSH 1934
Query: 391 NPYPIPVQD---VRAVTDMQHEIQWRENVMSQNNNKGLFYKN----LFTITDKKPWFAKA 443
N + Q+ +R + E +W+ +NKG + L +I ++ +
Sbjct: 1935 NFRNLLTQETGLIRNRILSEWENEWK------GSNKGGNLRQLDAALPSIHTRR--LYDS 1986
Query: 444 IPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILCCPKYQVT 500
+P R ++LR+ H+ + + + C EC +E + H+++ CPK +T
Sbjct: 1987 LP-RNRADLLSQLRTGHSWLALHGKLRRLREDDKC-ECGAKETVLHVLIDCPKLGIT 2041
>gi|374288552|ref|YP_005035637.1| ribonuclease H (RNase H) [Bacteriovorax marinus SJ]
gi|301167093|emb|CBW26672.1| ribonuclease H (RNase H) [Bacteriovorax marinus SJ]
Length = 213
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGT-FKLKNFATIFTAEAFAILQALKYVSSIK-------E 312
G C+ + W Q+ + FK T T ++ AL+ + S+K E
Sbjct: 69 GACRGNPGPGAWGMVGQDSSGAVLFKGSGVETNTTNNRMEMIGALEAMKSLKHHGINLSE 128
Query: 313 NEVIIITDSKSCLEKLKN---TSKSNG-------NPSHLILDIFKALSHLQEWNISVRFI 362
++V + +DSK ++ +K+ KS G P ++ D++K L + +++++
Sbjct: 129 SKVFLYSDSKYVVDGMKSWVSGWKSRGWKKADKKTPENV--DLWKELDTIASCFENIQYL 186
Query: 363 WVRGHAGIAGNEAVDRLAKET 383
WV+GHAG NE D+LA E
Sbjct: 187 WVKGHAGHPQNELCDQLANEA 207
>gi|340384228|ref|XP_003390616.1| PREDICTED: ribonuclease H-like [Amphimedon queenslandica]
Length = 167
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 10/61 (16%)
Query: 348 ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPY-PIPVQDVRAVTDM 406
A H EW +WV+GHAG GNE D LA+E A G + +P P+PV R++ +
Sbjct: 114 AADHEIEW------VWVKGHAGHEGNERADALARE-AIGKSSASPLDPLPVD--RSLVET 164
Query: 407 Q 407
Q
Sbjct: 165 Q 165
>gi|293652732|gb|ADE61218.1| pol protein, partial [Simian immunodeficiency virus]
Length = 997
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
T A L+ALK +V I+TDS+ L + S+ + + S L+ DI + L +
Sbjct: 624 TTNQKAELEALKLALEDSGPKVNIVTDSQYVLGII--NSQPDHSESPLVNDIIEQLMKKE 681
Query: 354 EWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ + WV H GI GNE VD+L + R
Sbjct: 682 K----IYLSWVPAHKGIGGNEQVDKLVSQGIR 709
>gi|37935980|gb|AAO47217.1| pol protein [Human immunodeficiency virus 1]
Length = 1027
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AIL AL+ + +V I+TDS+ L + +S+ + S ++ I + L+ ++
Sbjct: 646 AELMAILLALQD----SKEKVNIVTDSQYALGII--SSQPTQSESPIVQQIIEELTRKEQ 699
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE +D+L + R
Sbjct: 700 ----VYLAWVPAHKGIGGNEKIDKLVSKDIR 726
>gi|29119316|gb|AAO63232.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
K K + T A LQA++ +EV I+TDS+ L ++ ++ + + S L+
Sbjct: 618 KQKTVSLTETTNQKAELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQ 675
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + L ++ V WV H GI GNE VD+L R
Sbjct: 676 IIEQLIQKEK----VYLSWVPAHKGIGGNEQVDKLVSAGIR 712
>gi|451168216|gb|AGF30925.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1000
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+K +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 631 LQAIKLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKEK----VY 684
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 685 LSWVPAHKGIGGNEKVDKLVSTGIR 709
>gi|428304949|ref|YP_007141774.1| ribonuclease H [Crinalium epipsammum PCC 9333]
gi|428246484|gb|AFZ12264.1| Ribonuclease H [Crinalium epipsammum PCC 9333]
Length = 305
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 296 EAFAILQALKYVSSIKENEVIII-TDSKSCLEKLKN-----------TSKSNGNPSHLIL 343
E A + ALK+++ ++ E I + TDS+ L+ + TS+ + I
Sbjct: 52 EMLAAIAALKFIAKSQQTEPITLYTDSEYVLKGITQWVKGWKKKGWKTSQGKAVLNQDIW 111
Query: 344 DIFKAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
+I L S +Q+ S+ + +VRGHAG GNE D +A+ A G L
Sbjct: 112 EILDQLNSDIQQQGTSLNWQYVRGHAGNVGNERCDAIARGFAIGKPPL 159
>gi|341884882|gb|EGT40817.1| hypothetical protein CAEBREN_31166 [Caenorhabditis brenneri]
gi|341899024|gb|EGT54959.1| hypothetical protein CAEBREN_13800 [Caenorhabditis brenneri]
Length = 70
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
D+ L L++ + V+F+ VRGHAGI GNE D LA++ A+
Sbjct: 25 DVLLKLDSLRQ-KVKVKFVHVRGHAGIDGNEKADELARKGAQ 65
>gi|341571692|gb|AEK79484.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1001
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
E AIL ALK S EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 630 TELHAILLALKDSGS----EVNIVTDSQYALGIIQ--AQPDRSESELVNQIIEQLIKKEK 683
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 684 ----VYLTWVPAHKGIGGNEQVDKLVSSGIR 710
>gi|86753623|gb|ABD15044.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
T A LQA++ +EV I+TDS+ L ++ +G S L+ I + L + +
Sbjct: 630 TTNQKAELQAIQLALQDSGSEVNIVTDSQYALGIIQAQPDKSG--SELVNQIIEQLINKE 687
Query: 354 EWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VD+L + R
Sbjct: 688 R----IYLSWVPAHKGIGGNEQVDKLVSKGIR 715
>gi|343887422|ref|NP_001230610.1| ribonuclease H1 [Sus scrofa]
Length = 287
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSN 335
+L T AE A +AL+ + +++++ TDS + + KN +++
Sbjct: 175 IRLPGRQTNQRAEIHAACKALELAKAQNISKLVLYTDSMFTINGITSWVPGWKKNGWRTS 234
Query: 336 GNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ + + F+ L L + + V+++ V GHAG GNE DRLA+E A+
Sbjct: 235 THKEVVNKEDFQELERLAQ-GMDVQWMHVPGHAGFIGNEEADRLAREGAK 283
>gi|154275794|ref|XP_001538742.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413815|gb|EDN09180.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1621
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 1344 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 1403
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 1404 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 1456
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 1457 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 1515
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1516 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1569
>gi|37935941|gb|AAO47182.1| pol protein [Human immunodeficiency virus 1]
Length = 1011
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AIL AL+ KE V I+TDS+ L + + + +P L+ I + L+ ++
Sbjct: 630 AELMAILLALQ---DSKET-VNIVTDSQYALGIISSQPTQSDSP--LVQQIIEELTKKEQ 683
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE +D+L + R
Sbjct: 684 ----VYLAWVPAHKGIGGNEKIDKLVSKDIR 710
>gi|452820270|gb|EME27315.1| ribonuclease HI [Galdieria sulphuraria]
Length = 326
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 22/140 (15%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSI-----KENEV 315
G C ++ D ++N L T AE A++ AL+ V E E+
Sbjct: 176 GSCSAKAGYGVYFGDGDSRNISRPLLGQVQTNQRAELSAMIAALESVCKEPIVYESEAEI 235
Query: 316 IIITDSK--------SCLE--KLKNTSKSNGNPSHLILDIFKALSHL-----QEWNISVR 360
I TDS+ LE KL + + G +L D+ + L +L Q+ +
Sbjct: 236 YIYTDSRYVKDILTAGWLEQWKLNHWKRKVGELKNL--DLIQRLDYLWNKVHQQSKAKIE 293
Query: 361 FIWVRGHAGIAGNEAVDRLA 380
+WV+GH G+ GNE DRLA
Sbjct: 294 IVWVKGHDGLKGNEEADRLA 313
>gi|353244176|emb|CCA75615.1| hypothetical protein PIIN_09606, partial [Piriformospora indica DSM
11827]
Length = 717
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKN---TSKSNGNPSHLILDIFKA-LS 350
AE AI QAL+ V + ++II+DS + L + + ++ G D+ + L+
Sbjct: 589 AELAAITQALRIVP---KTPLLIISDSLTSLNMICHHIVAAEDKGWNEVANADLLQEILA 645
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTD 405
L+ + RF+W +GHA GN DRLA E T + ++ A+ D
Sbjct: 646 RLRTRPTTCRFMWTKGHADDIGNNEADRLADEGRASTHEFEDQELEIEHKLALQD 700
>gi|341571887|gb|AEK79578.1| pol protein [Simian immunodeficiency virus]
Length = 297
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AIL AL+ S +V I+TDS+ L L+ + + +P L+ +I + L E
Sbjct: 31 AELQAILLALQDSGS----KVNIVTDSQYVLGVLQGSPDQSESP--LVEEIIENLIQKDE 84
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VD+L + R
Sbjct: 85 ----IYLNWVPAHKGIGGNEEVDKLVSKDIR 111
>gi|256011026|gb|ACU55369.1| pol protein [Human immunodeficiency virus 1]
Length = 913
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ +
Sbjct: 635 LQAIHLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----IY 688
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 689 LAWVPAHKGIGGNEQVDKLVSAGIR 713
>gi|415940405|ref|ZP_11555639.1| Ribonuclease H [Herbaspirillum frisingense GSF30]
gi|407759176|gb|EKF68907.1| Ribonuclease H [Herbaspirillum frisingense GSF30]
Length = 144
Score = 40.8 bits (94), Expect = 2.3, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILDIF 346
E A++QAL + + EV++ TDS+ + K + ++ P D++
Sbjct: 47 ELMAVIQALNALK--RPCEVVVHTDSQYVQKGISEWIHGWKARGWKTASKEPVKNA-DLW 103
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDAL 390
+AL Q+ + V + WVRGH G AGNE D+LA RG D++
Sbjct: 104 QALDAAQQQH-QVEWRWVRGHNGHAGNERADQLAN---RGADSI 143
>gi|209489242|gb|ACI49024.1| hypothetical protein Cbre_JD04.009 [Caenorhabditis brenneri]
Length = 70
Score = 40.8 bits (94), Expect = 2.4, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
D+ L L++ + V+F+ VRGHAGI GNE D LA++ A+
Sbjct: 25 DVLLKLDSLRQ-KVKVKFVHVRGHAGIDGNEKADELARKGAQ 65
>gi|308452982|ref|XP_003089256.1| hypothetical protein CRE_30585 [Caenorhabditis remanei]
gi|308241429|gb|EFO85381.1| hypothetical protein CRE_30585 [Caenorhabditis remanei]
Length = 1140
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 53 QRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVKVIQMYK 111
QRG E GC + + + + + K K +N++VAW+DL A+ + PHE + + ++ Y+
Sbjct: 923 QRGFQE-REGCNESIGILRTAIDVAKGKKRNIAVAWLDLTNAFGSVPHELIKETLESYR 980
>gi|154282145|ref|XP_001541885.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412064|gb|EDN07452.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1278
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 993 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 1052
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 1053 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 1105
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 1106 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGKLSDWYRGWSFSRPTVEYQVKA 1164
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1165 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1218
>gi|373842404|gb|AEY77191.1| pol protein, partial [Human immunodeficiency virus]
Length = 1003
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSEAEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE +D+L R
Sbjct: 688 LAWVPAHKGIGGNEQIDKLVSSGIR 712
>gi|339507445|gb|AEJ81134.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 575 LQAIXLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 628
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 629 LAWVPAHKGIGGNEQVDKLVSAGIR 653
>gi|12407074|emb|CAC24835.1| polymerase [Human immunodeficiency virus 1]
Length = 1001
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ +EV I+TDS+ L ++ ++S+ + S L+ I + L ++ V
Sbjct: 632 LQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQSDKSESELVNQIIEQLIKKEK----VY 685
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 686 LSWVPAHKGIGGNEQVDKLVSSGIR 710
>gi|212703932|ref|ZP_03312060.1| hypothetical protein DESPIG_01985 [Desulfovibrio piger ATCC 29098]
gi|212672635|gb|EEB33118.1| ribonuclease HI [Desulfovibrio piger ATCC 29098]
Length = 159
Score = 40.8 bits (94), Expect = 2.5, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 307 VSSIKEN-EVIIITDSKSCLEKL----------KNTSKSNGNPSHLILDIFKALSHLQEW 355
+S+++E EV I TDSK + + +N KS+ P L +D++K L L
Sbjct: 57 LSALREACEVDIYTDSKYVCDAVEKGWLAGWQKRNWIKSDKKPV-LNVDLWKQLLPLLRT 115
Query: 356 NISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ V F W+RGHAG NE D LA+ A G D
Sbjct: 116 H-KVTFHWLRGHAGHRENERCDELARAFAAGPD 147
>gi|158423153|ref|YP_001524445.1| ribonuclease H [Azorhizobium caulinodans ORS 571]
gi|158330042|dbj|BAF87527.1| ribonuclease H [Azorhizobium caulinodans ORS 571]
Length = 186
Score = 40.8 bits (94), Expect = 2.6, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 318 ITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVD 377
++D +S E+ + S G P D+++ L L + VRF WVRGHAG GNE D
Sbjct: 99 VSDWRSGWER-RGWRNSKGQPV-ANADLWRTLYRLSDDRPGVRFAWVRGHAGDPGNELAD 156
Query: 378 RL 379
L
Sbjct: 157 ML 158
>gi|154277140|ref|XP_001539411.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412996|gb|EDN08379.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1128
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 88/226 (38%), Gaps = 24/226 (10%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSN 335
NK +F L + +F AEA +AL ++ + D+ S + ++ ++ ++
Sbjct: 865 NKQLASFSAALSPMSHVFDAEAVGACRALD------NPQIWLCLDNTSVIWGIRGSAAAS 918
Query: 336 GNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDA----LN 391
N ++ + L++ N+ ++ W GH GI GNE DRLAK T A L
Sbjct: 919 SNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSSTAAPAYGLE 971
Query: 392 PYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKAIP----LR 447
P V VR V + R+ +Y+ + KA P R
Sbjct: 972 ATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRPTVEYQVKAPPELTMPR 1030
Query: 448 KFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
+ + LRS+H Y + A L C + H++LC
Sbjct: 1031 HALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1076
>gi|302674651|ref|XP_003027010.1| hypothetical protein SCHCODRAFT_28981 [Schizophyllum commune H4-8]
gi|300100695|gb|EFI92107.1| hypothetical protein SCHCODRAFT_28981, partial [Schizophyllum
commune H4-8]
Length = 96
Score = 40.8 bits (94), Expect = 2.6, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 455 RLRSNHAICQAYLHKINIAPTNLCQECLERED-MAHIILCCPKYQVTLAIALVGSGQDAR 513
+LR+ H +LH+I AP+ +C C + E+ + H ++ CP + A G G++
Sbjct: 3 QLRTGHIPLATHLHRIKRAPSPICAACGQHEETVGHYLMVCPAHARHRQTAFTGLGRNRH 62
Query: 514 LV 515
L+
Sbjct: 63 LL 64
>gi|3776305|gb|AAC64711.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE A+L AL+ + +V I+TDS+ L + +S+ + S ++ I + L+ ++
Sbjct: 477 AELMAVLLALQ----DSKEKVNIVTDSQYALGII--SSQPTQSESPIVQQIIEELTKKEQ 530
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE +D+L + R
Sbjct: 531 ----VYLTWVPAHKGIGGNEKIDKLVSKDIR 557
>gi|255984940|gb|ACU46542.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 160
Score = 40.8 bits (94), Expect = 2.6, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 79 LQAIXLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 132
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 133 LAWVPAHKGIGGNEQVDKLVSNGIR 157
>gi|259089333|ref|NP_001158704.1| Ribonuclease H1 [Oncorhynchus mykiss]
gi|225704990|gb|ACO08341.1| Ribonuclease H1 [Oncorhynchus mykiss]
Length = 280
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILDI 345
AE A +AL+ + ++++ TDSK + KL N +G P + +
Sbjct: 179 AELQAACKALEQAKEMDIKKLVLYTDSKFTINGVTSWVKNWKLNNWRLKSGGPI-INRED 237
Query: 346 FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
F+ L L E + V ++ + GHAG GNE DRL++E A
Sbjct: 238 FEKLDKLNE-ELKVVWLHIPGHAGYLGNEEADRLSREGA 275
>gi|225555483|gb|EEH03775.1| RNase H domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 432
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE------------KLKNTSKSNGNPSHLI 342
AE AI++AL + +V I TDSK + K LI
Sbjct: 289 AELTAIIRALDIAP--RHRDVTIFTDSKYAINCVTVWFVNWQRNKWMTAQDKPVENKDLI 346
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + N+ F WVRGH+ GNEA DRLA A+
Sbjct: 347 QSILLKIEERTLLNVKTLFEWVRGHSRDPGNEAADRLAVNGAK 389
>gi|37935888|gb|AAP42147.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AIL AL+ + EV I+TDS+ L + + + +P ++ I + ++ +
Sbjct: 628 AELIAILLALQD----SKKEVNIVTDSQYALGIISSQPTQSDSP--IVQQIIEEMTKKER 681
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE +D+L + R
Sbjct: 682 ----VYLTWVPAHKGIGGNEKIDKLVSKDIR 708
>gi|17046643|gb|AAL34671.1| pol protein [Human immunodeficiency virus 1]
Length = 1005
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ E+EV I+TDS+ L ++ ++ + + S L+ I L + V
Sbjct: 636 LQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIGELIKKER----VY 689
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 690 LSWVPAHKGIGGNEQVDKLVSNGIR 714
>gi|37682471|gb|AAQ98164.1| pol protein [Human immunodeficiency virus 1]
Length = 1000
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ ++EV I+TDS+ L ++ ++ + + S L+ I + L + +
Sbjct: 629 AELQAIQLALQDSKSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLINKER---- 682
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 683 VYLSWVPAHKGIGGNEQVDKLVSSGIR 709
>gi|119177757|ref|XP_001240617.1| hypothetical protein CIMG_07780 [Coccidioides immitis RS]
Length = 154
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 176 QYESAPEYAKQNCFLNEVKDKWPNAYLIFTDGSKTSES--VASAFYDTQNKNSGTFKLQN 233
Q E++ + ++ +N +K+ + ++++D SK ES + Y+ N ++ L+
Sbjct: 11 QIENSDKKTAKDSHINRIKNLDNRSLILYSDKSKAKESQYAGAGVYNLHNNIKFSWDLEK 70
Query: 234 FATIFTAEAFAILQALKYASSIKEKEAGYCKVSIRESLWIFD----------TQNKNSGT 283
+ +F A FAI +A K SSI + ++ +W+F Q+ NSG
Sbjct: 71 YLEVFNATLFAIDKAFKLESSISQSQSRLI-----SDIWMFSDSQAAIQRLMNQDLNSGL 125
Query: 284 FKLKNF 289
+ L++
Sbjct: 126 YYLQSI 131
>gi|443700141|gb|ELT99252.1| hypothetical protein CAPTEDRAFT_193728 [Capitella teleta]
Length = 337
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 341 LILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKET 383
+I DI AL+ N+ V F+W+ H GI GNEA D LAK +
Sbjct: 26 IISDIQVALNVAANSNVDVSFLWIPSHCGIQGNEAADALAKAS 68
>gi|392565886|gb|EIW59062.1| hypothetical protein TRAVEDRAFT_122293 [Trametes versicolor
FP-101664 SS1]
Length = 131
Score = 40.4 bits (93), Expect = 2.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 455 RLRSNHAICQAYLHKINIAPTNLCQECLER-EDMAHIILCCPKYQVTLAIALVGSGQDAR 513
+ R+NH QAY+ +I A + C C E E + H +L CP Y + A+ G R
Sbjct: 23 QFRTNHVPLQAYMERIGKASSATCPTCGEAPETVQHYLLACPTYSLHRAVHFAPLGFSGR 82
Query: 514 LVNG 517
++
Sbjct: 83 TMSA 86
>gi|322800141|gb|EFZ21232.1| hypothetical protein SINV_06007 [Solenopsis invicta]
Length = 91
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR-GTDALNPYPIPVQDVRAVTDMQ 407
++ IW+ GH GI NE D LA++ R G D YPIPV ++ + +Q
Sbjct: 20 IKLIWIPGHIGIKSNERTDHLARKAIRDGRD--TKYPIPVVEITNLWKVQ 67
>gi|302336108|ref|YP_003801315.1| ribonuclease H [Olsenella uli DSM 7084]
gi|301319948|gb|ADK68435.1| ribonuclease H [Olsenella uli DSM 7084]
Length = 204
Score = 40.4 bits (93), Expect = 2.7, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVRA 402
+D++K L +E + V F+WV+GHAG NE D+LA A G P+ D R
Sbjct: 149 VDLWKRLLAAKEPH-QVSFVWVKGHAGTELNERCDQLATSAADGASG------PLLDDRG 201
Query: 403 VTD 405
TD
Sbjct: 202 FTD 204
>gi|4324766|gb|AAD17030.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 1427
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
T A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L +
Sbjct: 1051 TTNQRAELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVTQIIEQLIKKE 1108
Query: 354 EWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 1109 R----VYLSWVPAHKGIGGNEQVDKLVSSGIR 1136
>gi|312376130|gb|EFR23313.1| hypothetical protein AND_13122 [Anopheles darlingi]
Length = 361
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Query: 273 IFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTS 332
++D N +L +I TAE AI A+++++ +++TDS++ L+
Sbjct: 192 VYDETNDVRIALQLALDTSIMTAETLAIKVAMQHIADRGIRRAVLLTDSQAACMFLRRNR 251
Query: 333 KSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE--TARGTDAL 390
+S + + +I + Q V W+ GH ++GN D LA+ + G DA+
Sbjct: 252 ESRVRNA-VADEILRMARTFQ-----VTIQWIPGHVEVSGNRIADELARTALSEGGADAV 305
Query: 391 NPYPIPVQD 399
I + D
Sbjct: 306 LNNDIFIHD 314
>gi|306477677|gb|ADM89213.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 477 AELQAIQLALQDSGSEVNIVTDSQYALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 531 IYLSWVPAHKGIGGNEQVDRLVSTGIR 557
>gi|288187830|gb|ADC42402.1| pol protein [Human immunodeficiency virus 1]
Length = 670
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 578 LQAIHLALQDSEAEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 631
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE +D+L R
Sbjct: 632 LAWVPAHKGIGGNEQIDKLVSSGIR 656
>gi|167630849|ref|YP_001681348.1| ribonuclease h [Heliobacterium modesticaldum Ice1]
gi|167593589|gb|ABZ85337.1| ribonuclease h [Heliobacterium modesticaldum Ice1]
Length = 157
Score = 40.4 bits (93), Expect = 2.7, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 13/106 (12%)
Query: 294 TAEAFAILQALKYVSSIKEN-EVIIITDSKSCLEKLKN----TSKSNG------NPSHLI 342
T +L A+K + ++KE +V++ +DS+ ++ + K+NG +P+ L
Sbjct: 47 TNNRMEMLAAIKALEALKEPCQVVLYSDSRYLVDAVTQGWARRWKANGWMRNKKDPA-LN 105
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+D+++ L L E + V F WV+GHAG NE D+LA A D
Sbjct: 106 VDLWERLLQLLERH-QVEFRWVKGHAGNPENERCDKLATAAAARPD 150
>gi|443325980|ref|ZP_21054650.1| ribonuclease HI [Xenococcus sp. PCC 7305]
gi|442794417|gb|ELS03834.1| ribonuclease HI [Xenococcus sp. PCC 7305]
Length = 165
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALK---YVSSIKENEVIIITDSKSCLEKLK-NTSKSNG 336
SG +K + A A LQ+LK V+ +++ ++ K K + N K N
Sbjct: 47 SGGYKRTTNNRMEMMAAIAALQSLKQQCIVTLHSDSKYVVDAVMKGWARKWQANGWKRNK 106
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
D+++ L L + + V F+WV+GHAGI NE D LA AR D
Sbjct: 107 KEKAKNPDLWQKLLDLCDQH-QVEFVWVKGHAGIPENERCDTLAVAAARQPD 157
>gi|431810173|ref|YP_007237060.1| Phage ribonuclease H [Yersinia phage phiR201]
gi|398313159|emb|CCI88509.1| Phage ribonuclease H [Yersinia phage phiR201]
Length = 161
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTA----EAFAILQALKYVSSIKENEVI 316
G CK + W F N+ K+ T E AI++A+++ +I
Sbjct: 10 GACKKNPGPGAWGFIVYNEMDDRLGSKSAYNPHTTNNEMELTAIIEAIRWSVKKDNRPII 69
Query: 317 IITDSKSCLEKL---------KNTSKSNGNPSHLILDIFKALSHLQEWNISVR-----FI 362
I TDS C + K K++G L L++++ L + IS F+
Sbjct: 70 IYTDSTYCKNGMESWMFSWYRKGWKKADGEVP-LNLELWQEAWKLTQEYISHHGTNPTFV 128
Query: 363 WVRGHAGIAGNEAVDRL 379
V+GH+GI+GNEAVD L
Sbjct: 129 KVKGHSGISGNEAVDAL 145
>gi|306478227|gb|ADM89488.1| pol protein [Human immunodeficiency virus 1]
Length = 800
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 429 AELQAIQLALQDSGSEVNIVTDSQYALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 482
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 483 IYLSWVPAHKGIGGNEQVDRLVSTGIR 509
>gi|5106564|gb|AAD39753.1|AF131870_2 Pol protein [Simian immunodeficiency virus]
Length = 1027
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 274 FDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSK 333
+ TQ S KL+N T A L+A+K + V I+TDS+ L L
Sbjct: 640 YITQGGRSRVKKLEN-----TTNQQAELEAIKMALEDSRSSVNIVTDSQYALRLLSK--- 691
Query: 334 SNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
P+ ++ K + L V WV H GI GN+ +D+L + R
Sbjct: 692 ---RPTETDSELVKEIVELIRQKDQVYLGWVPAHKGIGGNQEIDQLVSQGIR 740
>gi|85700505|gb|ABC74623.1| pol protein [Human immunodeficiency virus 1]
Length = 955
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 630 LQAIHLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|306477679|gb|ADM89214.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 477 AELQAIQLALQDSGSEVNIVTDSQYALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 531 IYLSWVPAHKGIGGNEQVDRLVSTGIR 557
>gi|212383148|gb|ACJ25870.1| pol protein [Human immunodeficiency virus 1]
Length = 996
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+K EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 627 LQAIKLALQDSGAEVNIVTDSQYALGIIR--AQPDNSESELVNQIIEQLIQKER----VY 680
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 681 LSWVPAHKGIGGNEQVDKLVSSGIR 705
>gi|67921548|ref|ZP_00515066.1| Ribonuclease H [Crocosphaera watsonii WH 8501]
gi|416384947|ref|ZP_11684707.1| Ribonuclease HI [Crocosphaera watsonii WH 0003]
gi|67856660|gb|EAM51901.1| Ribonuclease H [Crocosphaera watsonii WH 8501]
gi|357264963|gb|EHJ13783.1| Ribonuclease HI [Crocosphaera watsonii WH 0003]
Length = 156
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL------------ 328
SG ++L + A L+AL K +VI+ TDS+ ++ +
Sbjct: 35 SGGYRLTTNNRMEMMAAIIALEALN-----KPCDVILYTDSRYVVDAITKGWAKKWQAND 89
Query: 329 --KNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
+N + NP D+++ L L E V F+WV+GHAG NE DRLA
Sbjct: 90 WQRNKKEQAKNP-----DLWQRLLDLCE-QHQVEFVWVKGHAGHPENEQCDRLA 137
>gi|992561|gb|AAA99879.1| pol polyprotein, partial [Human immunodeficiency virus 1]
Length = 1027
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AIL AL+ KE V I+TDS+ L + +S+ + S ++ I + L+ ++
Sbjct: 646 AELMAILLALQ---DSKET-VNIVTDSQYALGVI--SSQPTQSESPIVQQIIEELTKKEQ 699
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE +D+L + R
Sbjct: 700 ----VYLTWVPAHKGIGGNEKIDKLVSKDIR 726
>gi|306477693|gb|ADM89221.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 477 AELQAIQLALQDSGSEVNIVTDSQYALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 531 IYLSWVPAHKGIGGNEQVDRLVSTGIR 557
>gi|306477681|gb|ADM89215.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 477 AELQAIQLALQDSGSEVNIVTDSQYALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 531 IYLSWVPAHKGIGGNEQVDRLVSTGIR 557
>gi|256011378|gb|ACU55545.1| pol protein [Human immunodeficiency virus 1]
Length = 1004
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 635 LQAIHLALQDSRSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 688
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 689 LAWVPAHKGIGGNEQVDKLVSSGVR 713
>gi|226348582|gb|ACO50610.1| pol protein [Human immunodeficiency virus 1]
Length = 736
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ +EV I+TDS+ L ++ +K + + S L+ I + L ++ V
Sbjct: 412 LQAIQLALQDSGSEVNIVTDSQYALGIIQ--AKPDKSESELVNQIIEQLIKKEK----VY 465
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 466 LAWVPAHKGIGGNEQVDKLVSAGIR 490
>gi|149924708|ref|ZP_01913057.1| DNA polymerase III, epsilon subunit [Plesiocystis pacifica SIR-1]
gi|149814435|gb|EDM74027.1| DNA polymerase III, epsilon subunit [Plesiocystis pacifica SIR-1]
Length = 234
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 290 ATIFTAEAFAILQALKYVS-SIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKA 348
AT AE AIL+AL+ ++ KE + + TDS L L K+ N + LI I
Sbjct: 130 ATNNVAELKAILRALEAITDEEKERRIHLYTDSGWSLGVLIGGWKAKKNVA-LIEKIKTK 188
Query: 349 LSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDA 389
L L ++ + V+GHAG+ GNE D LA + R D+
Sbjct: 189 LPELP----NIELLKVKGHAGLEGNEEADALATKAVRIEDS 225
>gi|407278777|ref|ZP_11107247.1| ribonuclease H [Rhodococcus sp. P14]
Length = 195
Score = 40.4 bits (93), Expect = 2.8, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILDI 345
AE A+L+ALK + +II +DS+ ++ K K + G P LD+
Sbjct: 42 AELRALLEALK--AHPGPEPMIIESDSQYAIKCASEWLPGWKRKGWKTATGAPVK-NLDL 98
Query: 346 FKALSH-LQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
+A+ L E + VRF WVRGH G NE D+LA E
Sbjct: 99 VQAIDRVLAERSGPVRFRWVRGHVGNHFNELADKLAGE 136
>gi|344311844|gb|AEN04444.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 562
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ E EV I+TDS+ L ++ ++ + + S ++ I + L + +
Sbjct: 477 AELQAIQLALQDSEXEVNIVTDSQYALGIIQ--AQPDKSESEIVNQIIEQLINKER---- 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 531 VYLSWVPAHKGIGGNEQVDKLVSTGIR 557
>gi|306477691|gb|ADM89220.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 477 AELQAIQLALQDSGSEVNIVTDSQYALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 531 IYLSWVPAHKGIGGNEQVDRLVSTGIR 557
>gi|392872153|gb|AFM85346.1| polymerase polyprotein, partial [Simian immunodeficiency virus]
Length = 297
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE A+L AL+ S V I+TDS+ L L+ + + +P L+ +I + L +
Sbjct: 31 AELQAVLLALQDSGS----RVNIVTDSQYVLGVLQGSPDQSESP--LVTEIIENLIQKE- 83
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+V WV H GI GNE VD+L + R
Sbjct: 84 ---AVYLNWVPAHKGIGGNEEVDKLVSKDIR 111
>gi|341899022|gb|EGT54957.1| hypothetical protein CAEBREN_20592 [Caenorhabditis brenneri]
Length = 176
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 296 EAFAILQAL-KYVSSIKENEVIIITDSKSCLEKLKNTSK---------SNGNPSH---LI 342
E AI QAL + + S E ++ I TDSK + +K+ K S G H LI
Sbjct: 60 ELEAIGQALERSLDSGGEYDITIFTDSKYAINSIKHWIKKWKQNGWRNSQGKRVHNDLLI 119
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
DI L + SV F +V H+G NE DRLAK+ A
Sbjct: 120 QDIDCMLEDINYAGGSVEFEYVEAHSGNWFNEKADRLAKKAA 161
>gi|218679821|ref|ZP_03527718.1| putative ribonuclease HI [Rhizobium etli CIAT 894]
Length = 177
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 296 EAFAILQALKYVSSIKENEVIII-TDS----KSCLEK---LKNT----SKSNGNPSHLIL 343
E A+L+A+ +++S + E II +DS K C + KN S NGN +
Sbjct: 68 ELIAVLKAVMWINSEAKGEAAIIWSDSVYAVKGCNSRRHIWKNNGWKKSSPNGNARSRTI 127
Query: 344 ---DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
+++K + +N V W +GH+GIAGNE D LA
Sbjct: 128 ANAELWKTVDLQLSFNALVTIAWCKGHSGIAGNECADTLA 167
>gi|55139262|gb|AAV41285.1| pol protein [Human immunodeficiency virus 1]
Length = 997
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+K EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 628 LQAIKLALQDSGAEVNIVTDSQYALGIIR--AQPDNSESELVNQIIEQLIQKER----VY 681
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 682 LSWVPAHKGIGGNEQVDKLVSSGIR 706
>gi|62946402|gb|AAY22379.1| pol protein [Human immunodeficiency virus 1]
Length = 1007
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+K +EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 634 LQAIKLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LSWVPAHKGIGGNEQVDKLVSNGIR 712
>gi|306477683|gb|ADM89216.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 477 AELQAIQLALQDSGSEVNIVTDSQYALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 531 IYLSWVPAHKGIGGNEQVDRLVSTGIR 557
>gi|302416407|ref|XP_003006035.1| ribonuclease H [Verticillium albo-atrum VaMs.102]
gi|261355451|gb|EEY17879.1| ribonuclease H [Verticillium albo-atrum VaMs.102]
Length = 328
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNP---SHLI 342
AE AI++AL+ E +V I TDS+ + + K+ S G P L+
Sbjct: 224 AELTAIIRALEIAPD--EQDVQIFTDSQYSINCVTSWYKGWQKKDWHNSKGEPVKNRDLV 281
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
++ + + + S F WV+GHA GN A D LA AR
Sbjct: 282 EEVRELIETREAEGASTVFTWVKGHADNVGNTAADHLAVAGAR 324
>gi|256010757|gb|ACU55235.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEKVDKLVSSGIR 712
>gi|45360200|gb|AAS59232.1| pol protein [Human immunodeficiency virus 1]
Length = 947
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ EV I+TDS+ L ++ +K + + S L+ I + L ++ V
Sbjct: 578 LQAIHLALQDSGLEVNIVTDSQYALGIIQ--AKPDKSESELVSQIIEQLIKKEK----VY 631
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L + R
Sbjct: 632 LAWVPAHKGIGGNEQVDKLVRAGVR 656
>gi|154287076|ref|XP_001544333.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407974|gb|EDN03515.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 432
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE------------KLKNTSKSNGNPSHLI 342
AE AI++AL + +V I TDSK + K LI
Sbjct: 289 AELTAIIRALDIAP--RHRDVTIFTDSKYAINCVTVWFVNWQRNKWMTAQDKPVENKDLI 346
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + N+ F WVRGH+ GNEA DRLA A+
Sbjct: 347 QSILLKIEERTLLNVKTLFEWVRGHSRDPGNEAADRLAVNGAK 389
>gi|315044951|ref|XP_003171851.1| hypothetical protein MGYG_06396 [Arthroderma gypseum CBS 118893]
gi|311344194|gb|EFR03397.1| hypothetical protein MGYG_06396 [Arthroderma gypseum CBS 118893]
Length = 434
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 41/98 (41%), Gaps = 14/98 (14%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNP---SHLI 342
AE AI +AL K +V I TDSK ++ + N S P LI
Sbjct: 303 AELTAISRALDIAP--KHRDVTIFTDSKYSIDCVTVWCINWQRNNWVTSAQKPVENKDLI 360
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
I + + F WV+GH AGNEA DRLA
Sbjct: 361 QSILAKIEERNSLKVKTLFEWVKGHNKNAGNEAADRLA 398
>gi|363423737|ref|ZP_09311797.1| hypothetical protein AK37_24114 [Rhodococcus pyridinivorans AK37]
gi|359731464|gb|EHK80514.1| hypothetical protein AK37_24114 [Rhodococcus pyridinivorans AK37]
Length = 214
Score = 40.4 bits (93), Expect = 3.0, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 291 TIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALS 350
+I E AI A V+ ++ I+TDS+ L ++ T + G P I D+ + +
Sbjct: 98 SILEGELLAIDMA---VARFMHPKLHILTDSRLALACIEGTCE--GRPE--IADVVERIR 150
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDA 389
+ + +V F WVRGH+G NE DRLA R DA
Sbjct: 151 NRIKGR-TVEFSWVRGHSGHPLNEVADRLAVAARRCHDA 188
>gi|427798875|gb|JAA64889.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 312 ENEVIIITDSKSCLEKLKNTSKSNGNP-SHLIL-DIFKALSHLQEWNISVRFIWVRGHAG 369
+ + ++TDS++ +N +K P +H IL I L H VR +W GHA
Sbjct: 990 DEPITVVTDSQTAC---RNIAKGMVTPYTHRILTSIHPTLLH------RVRIVWTPGHAS 1040
Query: 370 IAGNEAVDRLAKE---TARGTDALNPYPIPVQDVRAVTDMQHEIQWR 413
+ GNE + +A+E A + NP P + + +QH Q R
Sbjct: 1041 LHGNERANAVARELTNRAPSEELSNPDDAPTEPLNYTETLQHYRQSR 1087
>gi|358022907|gb|AEU03928.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1007
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 307 VSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRG 366
++ I++ +V I+TDS+ C+ + + +++ + S + + + K L E + V WV
Sbjct: 642 LARIQDQKVNIVTDSQICI---RESFRAHPDRSEIRVSLIKITEKLIEKD-KVYLSWVPA 697
Query: 367 HAGIAGNEAVDRLAKETAR 385
H GI GNE VD+L R
Sbjct: 698 HKGIGGNEQVDKLVSNGIR 716
>gi|306477695|gb|ADM89222.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 477 AELQAIQLALQDSGSEVNIVTDSQYALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 531 IYLSWVPAHKGIGGNEQVDRLVSTGIR 557
>gi|154270402|ref|XP_001536056.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409983|gb|EDN05371.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1585
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 1272 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 1331
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 1332 IRGSAAASSNWAY-----NRCHELLRQHNLGLK--WAPGHMGIEGNEEADRLAKRAVSST 1384
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 1385 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRPTVEYQVKA 1443
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 1444 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 1497
>gi|344311824|gb|AEN04434.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 562
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L + +
Sbjct: 477 AELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLINKE----R 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 531 VYLTWVPAHKGIGGNEQVDKLVSRGIR 557
>gi|306477689|gb|ADM89219.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 477 AELQAIQLALQDSGSEVNIVTDSQYALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 531 IYLSWVPAHKGIGGNEQVDRLVSTGIR 557
>gi|306477685|gb|ADM89217.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 477 AELQAIQLALQDSGSEVNIVTDSQYALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 531 IYLSWVPAHKGIGGNEQVDRLVSTGIR 557
>gi|268608636|ref|ZP_06142363.1| ribonuclease h [Ruminococcus flavefaciens FD-1]
Length = 127
Score = 40.4 bits (93), Expect = 3.0, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 294 TAEAFAILQALKYVSSIKEN-EVIIITDSKSCLE----------KLKNTSKSNGNPSHLI 342
T +L + +S++KE +V + TDSK ++ K K KS+ P+ L
Sbjct: 23 TNNRMELLGVITGLSALKEPCKVTLTTDSKYVVDSVTKGWVYGWKKKGWIKSDKKPA-LN 81
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
+D+++ L L E + V F WV+GHAG NE DRLA E
Sbjct: 82 VDLWEMLLPLLEKH-DVTFNWVKGHAGHPENERCDRLAVE 120
>gi|238734285|gb|ACR55508.1| pol protein [Human immunodeficiency virus 1]
Length = 1018
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L + ++ V
Sbjct: 649 LQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLINKEK----VY 702
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 703 LAWVPAHKGIGGNEQVDKLVSAGIR 727
>gi|115334443|dbj|BAF33180.1| Pol [Human immunodeficiency virus 1]
Length = 1006
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+K +EV I+TDS+ L ++ ++ + + S L+ I + L + + V
Sbjct: 637 LQAIKLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLINKER----VY 690
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 691 LSWVPAHKGIGGNEQVDKLVSSGIR 715
>gi|13095229|gb|AAK12192.1| pol polyprotein [Human immunodeficiency virus 1]
Length = 560
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ EV I+TDS+ L ++ +G S L+ I + L +E V
Sbjct: 479 LQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDQSG--SELVSQIIEQLIKKEE----VY 532
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 533 LAWVPAHKGIGGNEQVDKLVSAGIR 557
>gi|325094793|gb|EGC48103.1| RNase H domain-containing protein [Ajellomyces capsulatus H88]
Length = 429
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLE------------KLKNTSKSNGNPSHLI 342
AE AI++AL + +V I TDSK + K LI
Sbjct: 289 AELTAIIRALDIAP--RHRDVTIFTDSKYAINCVTVWFVNWQRNKWMTAQDKPVENKDLI 346
Query: 343 LDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + N+ F WVRGH+ GNEA DRLA A+
Sbjct: 347 QSILLKIEERTLLNVKTLFEWVRGHSQNPGNEAADRLAVNGAK 389
>gi|306477697|gb|ADM89223.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 477 AELQAIQLALQDSGSEVNIVTDSQYALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 531 IYLSWVPAHKGIGGNEQVDRLVSTGIR 557
>gi|256011706|gb|ACU55709.1| pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ S+ + + S +++ I + L ++ +
Sbjct: 633 LQAIYLALQDSGSEVNIVTDSQYALGIIQ--SQPDKSESEIVMQIIEELIKKEK----IY 686
Query: 361 FIWVRGHAGIAGNEAVDRLAKETARGTDALN 391
WV H GI GNE VD+L R L+
Sbjct: 687 LAWVPAHKGIGGNEQVDKLVSNGIRKVXFLD 717
>gi|348558346|ref|XP_003464979.1| PREDICTED: ribonuclease H1-like [Cavia porcellus]
Length = 294
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSN 335
+L T AE A +A++ + +++++ TDS + + KN +++
Sbjct: 172 IRLPGRQTNQRAEIHAACKAIEQAKAQDISKLVLYTDSMFTINGITSWVPGWKKNGWRTS 231
Query: 336 GNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ + F+ L L E + ++++ + GH+G GNE DRLA+E AR
Sbjct: 232 TGKEVINKEDFERLEQLAE-GMDIQWMHIPGHSGFTGNEEADRLAREGAR 280
>gi|306477699|gb|ADM89224.1| pol protein [Human immunodeficiency virus 1]
Length = 827
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 456 AELQAIQLALQDSGSEVNIVTDSQCALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 509
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 510 IYLSWVPAHKGIGGNEQVDRLVSTGIR 536
>gi|13540183|gb|AAK29349.1| pol polyprotein [Human immunodeficiency virus 1]
Length = 1004
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+K +EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 631 LQAIKLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER----VY 684
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 685 LSWVPAHKGIGGNEQVDKLVSNGIR 709
>gi|334339767|ref|YP_004544747.1| Ribonuclease H [Desulfotomaculum ruminis DSM 2154]
gi|334091121|gb|AEG59461.1| Ribonuclease H [Desulfotomaculum ruminis DSM 2154]
Length = 156
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
Query: 294 TAEAFAILQALKYVSSIKEN-EVIIITDSKSCLEKLK---------NTSKSNGNPSHLIL 343
T I+ A+ + ++KE V + TDS+ + ++ N N L
Sbjct: 44 TNNRMEIMAAIASLEALKEKCSVTLYTDSQYLVNAMEKGWAKKWRANGWMRNKKEPALNP 103
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
D+++ L L +++ V+F+WVRGH+G NE D+LA E ++ D
Sbjct: 104 DLWERLLTLCQYH-KVKFLWVRGHSGNPENERCDQLAVEASKQPD 147
>gi|306478245|gb|ADM89497.1| pol protein [Human immunodeficiency virus 1]
Length = 709
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 338 AELQAIQLALQDSGSEVNIVTDSQYALGVIQ--AQPDKSESELVNQIIEQLIKKEK---- 391
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VDRL R
Sbjct: 392 IYLSWVPAHKGIGGNEQVDRLVSTGIR 418
>gi|213495576|gb|ACJ49044.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSNGIR 712
>gi|51599140|gb|AAU08224.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE A+L AL+ + +V I+TDS+ L + +S+ + S ++ I + L++ ++
Sbjct: 628 AELMAVLLALQD----SKEKVNIVTDSQYVLGII--SSQPTQSESPIVQQIIEELTNKEQ 681
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE +D+L + R
Sbjct: 682 ----VYLTWVPAHKGIGGNEKIDKLVSKDIR 708
>gi|15055097|gb|AAK82844.1| pol protein [Simian immunodeficiency virus]
Length = 1016
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AIL ALK S + N I+TDS+ L L T + NP ++ +I + +
Sbjct: 645 AELEAILLALKD-SGPRAN---IVTDSQYALGILSATPDRSDNP--IVREIINQMIAKE- 697
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+V WV H GI GNE +D+L + R
Sbjct: 698 ---AVYLAWVPAHKGIGGNEQIDKLVSKGIR 725
>gi|428772645|ref|YP_007164433.1| RNase HI [Cyanobacterium stanieri PCC 7202]
gi|428686924|gb|AFZ46784.1| RNase HI [Cyanobacterium stanieri PCC 7202]
Length = 159
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL---------KNT 331
SG F L T E FA + L+ + K +V + TDS+ + + KN
Sbjct: 40 SGGFSL---TTNNRMEIFATIVGLRSLK--KPCKVRLYTDSQYVVNAINKGWAQKWEKNG 94
Query: 332 SKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
K N D++ L L + V FIWVRGHAG NE DRLA + A G +
Sbjct: 95 WKRNSKEKAKNPDLWADLLALCR-SHEVEFIWVRGHAGNKENERCDRLAFDAAHGNN 150
>gi|25167011|gb|AAN73781.1|AF484516_1 gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 1433
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L L+ ++ + + S L+ I + L ++ V
Sbjct: 1064 LQAINLALQDSELEVNIVTDSQYALGILQ--AQPDKSESELVNQIIEQLIKKEK----VY 1117
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 1118 LSWVPAHKGIGGNEQVDKLVSNGIR 1142
>gi|344311822|gb|AEN04433.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 562
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L + +
Sbjct: 477 AELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLINKE----R 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 531 VYLTWVPAHKGIGGNEQVDKLVSRGIR 557
>gi|158967398|gb|ABW86742.1| pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+K +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 633 LQAIKLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEELIKKEK----VY 686
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 687 LSWVPAHKGIGGNEQVDKLVSSGIR 711
>gi|154283763|ref|XP_001542677.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410857|gb|EDN06245.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 709
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 46/244 (18%)
Query: 278 NKNSGTFK--LKNFATIFTAEA----FAILQALKYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +A+ A+K + + E+ ++ + D+ S +
Sbjct: 425 NKQLASFSAALSPMSHVFDAEAVGACWALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 484
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
++ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 485 IRGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 537
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITD-------K 436
A L P V VR V +SQ + + ++D
Sbjct: 538 AAPAYGLEATPT-VSGVRTVAKQ----------LSQEARRKWWSGACGKLSDWCRGWSFS 586
Query: 437 KP---WFAKAIP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAH 489
+P + KA P R + + LRS+H Y + A L C + H
Sbjct: 587 RPTVEYQVKAPPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEH 646
Query: 490 IILC 493
++LC
Sbjct: 647 LVLC 650
>gi|22596525|gb|AAN03284.1|AF457085_2 pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+K +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 630 LQAIKLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 683
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 684 LSWVPAHKGIGGNEQVDKLVSNGIR 708
>gi|451169658|gb|AGF32175.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 971
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|86753453|gb|ABD14891.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA+ E+EV ++TDS+ L ++ ++ + + S L+ I + L +
Sbjct: 635 AELQAIHLALQDSESEVNVVTDSQYALGIIQ--AQPDRSESELVNQIIEQLIKKER---- 688
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 689 VYLSWVPAHKGIGGNEQVDKLVSSGIR 715
>gi|376405427|gb|AFB37677.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1005
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 636 LQAIHLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 689
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 690 LAWVPAHKGIGGNEKVDKLVSTGIR 714
>gi|410955906|ref|XP_003984589.1| PREDICTED: ribonuclease H1 [Felis catus]
Length = 277
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKN---TSKSNGNPSH 340
+L T AE A +A++ + ++++ TDS + + N K NG +
Sbjct: 165 IRLPGRQTNQRAEIHAACKAIEQAKAQNIKKLVLYTDSMFTINGITNWVQGWKKNGWKTS 224
Query: 341 LILDI-----FKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
D+ F AL L + ++++ V GH+G GNE DRLA+E A+ ++
Sbjct: 225 TGKDVINKEDFVALEQLTH-GMDIQWMHVPGHSGFTGNEEADRLAREGAKQSE 276
>gi|384172790|ref|YP_005554167.1| ribonuclease HI [Arcobacter sp. L]
gi|345472400|dbj|BAK73850.1| ribonuclease HI [Arcobacter sp. L]
Length = 273
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 295 AEAFAILQALKYVSSI-KENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILD 344
AE A+ QAL S EN + I +DSK ++ K SK G +L +
Sbjct: 151 AELNALFQALTIASQTHSENIISIYSDSKYSIDCITTWAYGWKKNGWSKKGGEIKNL--E 208
Query: 345 IFKALSHLQE-WNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ + HL E + I VRGH GI GNE DR+A T + +
Sbjct: 209 LIQEAHHLYEKLKNKIEIIHVRGHKGIEGNELADRMAVYTIKAKN 253
>gi|332254936|ref|XP_003276592.1| PREDICTED: ribonuclease H1 [Nomascus leucogenys]
Length = 258
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 23/104 (22%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
+L T AE A +A++ + N++++ TDS + NG SHLI
Sbjct: 177 RLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTI---------NGKLSHLISS 227
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+F + V GH+G GNE DRLA+E A+ ++
Sbjct: 228 VFP--------------MHVPGHSGFIGNEEADRLAREGAKQSE 257
>gi|110815940|sp|Q77373.3|POL_HV1AN RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1435
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AIL AL+ KE V I+TDS+ L + +S+ + S ++ I + L+ ++
Sbjct: 1063 AELMAILLALQ---DSKET-VNIVTDSQYALGVI--SSQPTQSESPIVQQIIEELTKKEQ 1116
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE +D+L + R
Sbjct: 1117 ----VYLTWVPAHKGIGGNEKIDKLVSKDIR 1143
>gi|12407063|emb|CAC24829.1| pol [Human immunodeficiency virus 1]
Length = 225
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ +EV I+TDS+ L ++ ++S+ + S L+ I + L ++ V
Sbjct: 150 LQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQSDKSESELVNQIIEQLIKKEK----VY 203
Query: 361 FIWVRGHAGIAGNEAVDRL 379
WV H GI GNE VD+L
Sbjct: 204 LSWVPAHKGIGGNEQVDKL 222
>gi|4324783|gb|AAD17047.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 1427
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
T A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L +
Sbjct: 1051 TTNQKAELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVTQIIEQLIKKE 1108
Query: 354 EWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 1109 R----VYLSWVPAHKGIGGNEQVDKLVSSGIR 1136
>gi|158522739|ref|YP_001530609.1| ribonuclease H [Desulfococcus oleovorans Hxd3]
gi|158511565|gb|ABW68532.1| Ribonuclease H [Desulfococcus oleovorans Hxd3]
Length = 192
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 281 SGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTS 332
SG +KL T E A++ AL+ + E ++I +DSK ++ + K
Sbjct: 70 SGGYKL---TTNNRMELMAVIVALRELQDDDERPIVIYSDSKYVVDSINKGWVLGWKENK 126
Query: 333 KSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ N + + D++K L+ + V F WV+GHA N D+LA AR
Sbjct: 127 WAVTNGTRVNSDLWKKFLRLRS-KVDVEFRWVKGHATDPLNIKADQLANSAAR 178
>gi|339507555|gb|AEJ81189.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 575 LQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 628
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L + R
Sbjct: 629 LSWVPAHKGIGGNEQVDKLVSKGIR 653
>gi|156254345|gb|ABU62662.1| RNase H [Human immunodeficiency virus 1]
Length = 120
Score = 40.4 bits (93), Expect = 3.3, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 39 LQAIYLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 92
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE +D+L R
Sbjct: 93 LAWVPAHKGIGGNEQIDKLVSSGIR 117
>gi|451169818|gb|AGF32308.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451169801|gb|AGF32294.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 976
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
T A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 600 TTNQKAELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKE 657
Query: 354 EWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 658 R----VYLSWVPAHKGIGGNEQVDKLVSSGIR 685
>gi|345497464|ref|XP_003428000.1| PREDICTED: hypothetical protein LOC100679391 [Nasonia vitripennis]
Length = 166
Score = 40.4 bits (93), Expect = 3.3, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
+KL + ++IFTAEA+AIL ++++ + I +D KS +E L + ++G+ +L
Sbjct: 48 YKLSSHSSIFTAEAYAILNTIRFILDNNLSPCCIYSDPKSMIESLNTKNSNSGSGYYL 105
>gi|326632976|ref|YP_004306565.1| ribonuclease H [Enterobacteria phage SPC35]
gi|321272170|gb|ADW80062.1| ribonuclease H [Enterobacteria phage SPC35]
Length = 158
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 17/136 (12%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTA----EAFAILQALKYVSSIKENEVI 316
G CK + W F + N K+ T E AI++AL++ +
Sbjct: 10 GACKSNPGPGAWGFIVYDDNDDRLGSKSGYNPKTTNNEMELTAIVEALRWSVKKDNRPIA 69
Query: 317 IITDSKSCLEKL---------KNTSKSNGN-PSHLIL--DIFK-ALSHLQEWNISVRFIW 363
I TDS C + K K++G P +L L + FK ++ N + FI
Sbjct: 70 IYTDSAYCKNGMESWMFSWQRKGWKKADGEVPLNLELWQEAFKLTQQYINFHNTNPTFIK 129
Query: 364 VRGHAGIAGNEAVDRL 379
V+GH+GI+GNEAVD L
Sbjct: 130 VKGHSGISGNEAVDAL 145
>gi|451169747|gb|AGF32249.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQESGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451169652|gb|AGF32170.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|443302747|gb|AGC82273.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 947
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L +
Sbjct: 576 AELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIQKER---- 629
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 630 VYLSWVPAHKGIGGNEQVDKLVSSGIR 656
>gi|308463606|ref|XP_003094076.1| hypothetical protein CRE_17529 [Caenorhabditis remanei]
gi|308248642|gb|EFO92594.1| hypothetical protein CRE_17529 [Caenorhabditis remanei]
Length = 1182
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHE 101
N +L QRG E GC + + + + + K K ++LSVAW+DL A+ + PHE
Sbjct: 459 NGVLSKCQRGFQE-REGCNESIAILRTAIDVAKGKKRDLSVAWLDLTNAFGSVPHE 513
>gi|451169783|gb|AGF32279.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451169753|gb|AGF32254.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451169676|gb|AGF32190.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451169670|gb|AGF32185.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|238632974|gb|ACR51080.1| pol protein [Human immunodeficiency virus 1]
Length = 988
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ + + S L+ I K L + ++ V
Sbjct: 637 LQAIHLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIKKLINKEK----VY 690
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 691 LAWVPAHKGIGGNEQVDKLVSAGIR 715
>gi|341571891|gb|AEK79579.1| pol protein [Simian immunodeficiency virus]
Length = 297
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPS 339
+ G +K K T A L A+K ++EV I+TDS+ + L+ + +P
Sbjct: 14 DRGKYKTKGLDK--TTNQQAELWAIKLALEDSDSEVNIVTDSQYAMGVLQGHPDQSDSP- 70
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
L+ I + L + V WV H G+ GN+ VD+L + R
Sbjct: 71 -LVQQIIELLVKKE----GVYLAWVPAHKGVGGNQEVDKLVSKNIR 111
>gi|255983922|gb|ACU46033.1| pol protein [Human immunodeficiency virus 1]
Length = 659
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 578 LQAIXLALQDSGLEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 631
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L E R
Sbjct: 632 LAWVPAHKGIGGNEQVDKLVSEGIR 656
>gi|451169812|gb|AGF32303.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451169795|gb|AGF32289.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451169759|gb|AGF32259.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451169741|gb|AGF32244.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451169688|gb|AGF32200.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451168235|gb|AGF30942.1| pol protein, partial [Human immunodeficiency virus 1]
gi|451169706|gb|AGF32215.1| pol protein, partial [Human immunodeficiency virus 1]
gi|451169712|gb|AGF32220.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|59897228|gb|AAX12023.1| ribonuclease HI [Enterobacteria phage T5]
Length = 111
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDSKSCLEKL---------KNTSKSNGN-PSHLIL-- 343
E AI++AL++ ++I TDS C + K K++G P +L L
Sbjct: 2 ELTAIVEALRWSVKKDNRPIVIYTDSAYCKNGMESWMFSWQRKGWKKADGEVPLNLELGQ 61
Query: 344 DIFK-ALSHLQEWNISVRFIWVRGHAGIAGNEAVDRL 379
+ FK ++ N + FI V+GH+GI+GNEAVD L
Sbjct: 62 EAFKLTQQYINFHNTNPTFIKVKGHSGISGNEAVDAL 98
>gi|388570450|ref|YP_006382389.1| RNaseH [Escherichia phage bV_EcoS_AKFV33]
gi|356601368|gb|AET24702.1| RNaseH [Escherichia phage bV_EcoS_AKFV33]
Length = 158
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 17/136 (12%)
Query: 261 GYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTA----EAFAILQALKYVSSIKENEVI 316
G CK + W F + N K+ T E AI++AL++ +
Sbjct: 10 GACKSNPGPGAWGFIVYDDNDDRLGSKSGYNPKTTNNEMELTAIVEALRWSVKKDNRPIA 69
Query: 317 IITDSKSCLEKL---------KNTSKSNGN-PSHLIL--DIFK-ALSHLQEWNISVRFIW 363
I TDS C + K K++G P +L L + FK ++ N + FI
Sbjct: 70 IYTDSAYCKNGMESWMFSWQRKGWKKADGEVPLNLELWQEAFKLTQQYINFHNTNPTFIK 129
Query: 364 VRGHAGIAGNEAVDRL 379
V+GH+GI+GNEAVD L
Sbjct: 130 VKGHSGISGNEAVDAL 145
>gi|193794907|gb|ACF21599.1| pol protein [Human immunodeficiency virus 1]
Length = 997
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA+ E+EV ++TDS+ L ++ ++ + + S L+ I + L +
Sbjct: 626 AELQAIYLALQDSESEVNVVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 679
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 680 VYLSWVPAHKGIGGNEQVDKLVSAGIR 706
>gi|218528927|ref|YP_002419743.1| ribonuclease H [Methylobacterium extorquens CM4]
gi|218521230|gb|ACK81815.1| ribonuclease H [Methylobacterium extorquens CM4]
Length = 228
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLA 380
VR+ WVRGHAG AGNE DRLA
Sbjct: 116 VRWTWVRGHAGEAGNERADRLA 137
>gi|163850369|ref|YP_001638412.1| ribonuclease H [Methylobacterium extorquens PA1]
gi|238687372|sp|A9W185.1|RNH_METEP RecName: Full=Ribonuclease H; Short=RNase H
gi|163661974|gb|ABY29341.1| ribonuclease H [Methylobacterium extorquens PA1]
Length = 228
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLA 380
VR+ WVRGHAG AGNE DRLA
Sbjct: 116 VRWTWVRGHAGEAGNERADRLA 137
>gi|156717518|ref|NP_001096299.1| ribonuclease H1 [Xenopus (Silurana) tropicalis]
gi|134023904|gb|AAI35623.1| LOC100124876 protein [Xenopus (Silurana) tropicalis]
Length = 299
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNG----- 336
KL+ T AE A +AL+ S +++++ TDS + + K ++ K NG
Sbjct: 186 KLEGRQTNQRAEIQAACRALELAKSQNISKLVLYTDSMFTINGITKWIHSWKRNGWKLTT 245
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ + F+ L L + + ++++ + GHAG GNEA DRL++E A+
Sbjct: 246 GKKVINREDFEKLDKLTQ-GLDIKWMHIPGHAGFEGNEAADRLSREGAQ 293
>gi|451169771|gb|AGF32269.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451169765|gb|AGF32264.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451169682|gb|AGF32195.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|393237611|gb|EJD45152.1| hypothetical protein AURDEDRAFT_42944, partial [Auricularia
delicata TFB-10046 SS5]
Length = 84
Score = 40.4 bits (93), Expect = 3.4, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 363 WVRGHAGIAGNEAVDRLAKETARGTDA 389
WV GH G+ GNEA DR AK+ +GT +
Sbjct: 5 WVPGHGGVVGNEAADRAAKQAVQGTQS 31
>gi|308458276|ref|XP_003091484.1| hypothetical protein CRE_03494 [Caenorhabditis remanei]
gi|308256656|gb|EFP00609.1| hypothetical protein CRE_03494 [Caenorhabditis remanei]
Length = 2187
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHE 101
N +L QRG E GC + + + + + K K ++LSVAW+DL A+ + PHE
Sbjct: 1464 NGVLSKCQRGFQE-REGCNESIGILRTAIDVAKGKKRDLSVAWLDLTNAFGSVPHE 1518
>gi|344311846|gb|AEN04445.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 562
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ E EV I+TDS+ L ++ ++ + + S ++ I + L + +
Sbjct: 477 AELQAIQLALQDSEAEVNIVTDSQYALGIIQ--AQPDKSESEIVNQIIEQLINKER---- 530
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 531 VYLSWVPAHKGIGGNEQVDKLVSTGIR 557
>gi|376407007|gb|AFB39095.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1002
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ +G S L+ I + L ++ V
Sbjct: 633 LQAINLALQDSGSEVNIVTDSQYALGIIQAQPDRSG--SELVSQIIEQLIKKEK----VY 686
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 687 LAWVPAHKGIGGNEQVDKLVSSGIR 711
>gi|242763350|ref|XP_002340558.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218723754|gb|EED23171.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 133
Score = 40.4 bits (93), Expect = 3.5, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 314 EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE----WNISVRFIWVRGHAG 369
E I TD+++ + +S+G +++ I + L L++ W VR WV GH G
Sbjct: 36 EATIYTDNQAAIRATCQPGRSSGQ--YILRRIVRHLGLLRDNRSRWR--VRLQWVPGHEG 91
Query: 370 IAGNEAVDRLAKETA 384
+ GNE D+LAK A
Sbjct: 92 VPGNEKADQLAKLAA 106
>gi|59003658|gb|AAW83654.1| pol protein [Human immunodeficiency virus 1]
gi|212383299|gb|ACJ25934.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ +EV I+TDS+ L ++ +K + + S L+ I + L + V
Sbjct: 637 LQAIQLALQDSGSEVNIVTDSQYALGIIQ--AKPDKSESELVNQIIEELIKKER----VY 690
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 691 LSWVPAHKGIGGNEQVDKLVSSGIR 715
>gi|26245460|gb|AAN77389.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++ +S
Sbjct: 628 AELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIRKEKIYLS 685
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L + R
Sbjct: 686 ----WVPAHKGIGGNEQVDKLVSQGIR 708
>gi|451169789|gb|AGF32284.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|451169730|gb|AGF32235.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|73913864|gb|AAZ91838.1| pol protein [Human immunodeficiency virus 1]
Length = 1011
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ +EV I+TDS+ L ++ ++ + + S L+ +I + L + + V
Sbjct: 642 LQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNNIIEQLINKER----VY 695
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 696 LAWVPAHKGIGGNEQVDKLVSRGIR 720
>gi|339507485|gb|AEJ81154.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L L+ ++ + + S L+ I + L ++ V
Sbjct: 575 LQAINLALQDSGSEVNIVTDSQYALGILQ--AQPDKSESELVSQIIEQLIKKEK----VY 628
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 629 LAWVPAHKGIGGNEKVDKLVSAGIR 653
>gi|254559621|ref|YP_003066716.1| ribonuclease H [Methylobacterium extorquens DM4]
gi|254266899|emb|CAX22698.1| Ribonuclease H (RNase H) [Methylobacterium extorquens DM4]
Length = 225
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLA 380
VR+ WVRGHAG AGNE DRLA
Sbjct: 113 VRWTWVRGHAGEAGNERADRLA 134
>gi|343415575|emb|CCD20623.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 1752
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 288 NFATIFTAEAFAILQALKYVSSIKE------NEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
+ A + AE A+ LK + + E V+ TDS S L L NT + + +
Sbjct: 1008 SLACSYRAECVAMEAGLKRLVEVIELSKTHRTRVVAFTDSLSLLMAL-NTGPAAVEDA-I 1065
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
+ I+ + H+ +SV F +V H G+ NEA D+ A++ G YP + D+
Sbjct: 1066 LRRIWDLILHIVRLRVSVNFQFVFSHCGVPRNEAADKAAEQ---GNAKPQSYPAWITDI- 1121
Query: 402 AVTDMQHEIQ------WRENVMSQNNNKGLF 426
VT ++ +++ + E M++ + L
Sbjct: 1122 -VTGVERQVRNEMYRAFEEGRMTRTHRSALL 1151
>gi|326370932|gb|ADZ56677.1| pol protein [Human immunodeficiency virus 1]
Length = 1005
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ + + S L+ I + L + ++ V
Sbjct: 636 LQAIHLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVXQIIEQLINKEK----VY 689
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 690 LAWVPAHKGIGGNEQVDKLVSTGIR 714
>gi|405976256|gb|EKC40769.1| Ribonuclease H1 [Crassostrea gigas]
Length = 372
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLK---NTSKSNG----- 336
+L AT AE A A+K V ++TDS+ + + + K NG
Sbjct: 255 RLPGRATNNRAEIHAARIAVKQAKEKGMGSVTVVTDSQFLINGITSWIHKWKKNGWTLSD 314
Query: 337 NPSHLILDIFKAL-SHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
N + +K+L S +Q I V+F V GH G+ GNEA DRLA E A
Sbjct: 315 NTKVKNEEDWKSLDSEMQ--GIDVKFKHVPGHRGVDGNEAADRLANEGA 361
>gi|71725993|gb|AAZ39126.1| pol protein [Human immunodeficiency virus 1]
Length = 1007
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
K K + T A LQA++ +EV I+TDS+ L ++ ++ + + S L+
Sbjct: 622 KQKAVSLTETTNQKAELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQ 679
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + L + ++ V WV H GI GNE VD+L R
Sbjct: 680 IIEQLINKEK----VYLSWVPAHKGIGGNEQVDKLVSAGIR 716
>gi|405981890|ref|ZP_11040216.1| hypothetical protein HMPREF9240_01222 [Actinomyces neuii BVS029A5]
gi|404391785|gb|EJZ86848.1| hypothetical protein HMPREF9240_01222 [Actinomyces neuii BVS029A5]
Length = 292
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 295 AEAFAILQALKYV--SSIKENEVIIITDSKSCLEKL---------KNTSKSNGNPSHLIL 343
E A+L L+ + + + E++I DS+ + L KN K++G P L
Sbjct: 41 GELTAVLNLLESTREAGLADQELVIFADSQYVINALTKWIRGWKKKNWKKADGKPV-LNK 99
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETA 384
D+ AL E V F WV+GHAG NEA D A+ A
Sbjct: 100 DLMVALDKEME-GRKVTFKWVKGHAGHQMNEAADTRARGAA 139
>gi|198461141|ref|XP_002135891.1| GA22538 [Drosophila pseudoobscura pseudoobscura]
gi|198139679|gb|EDY70778.1| GA22538 [Drosophila pseudoobscura pseudoobscura]
Length = 364
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 8/130 (6%)
Query: 370 IAGNEAVDRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKN 429
+AG + LA E A G A QD R + +QW+++ N++KG +
Sbjct: 187 VAGMIPIHLLASEAA-GIRAQRTLGTTDQDTRGALRQRTILQWQDS--WDNSSKGRWTHR 243
Query: 430 LFTITDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLER-EDMA 488
L I D K W ++ ++ +T +L + H +AYLH+ C C ED
Sbjct: 244 L--IPDLKSWLNRSHGQVEYHLT--QLLTGHGCFKAYLHRFKHEDDPFCVVCAGVIEDAE 299
Query: 489 HIILCCPKYQ 498
H CP+++
Sbjct: 300 HCFFECPRFR 309
>gi|56193005|gb|AAV84110.1| pol protein [Human immunodeficiency virus 1]
Length = 1011
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+K +EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 638 LQAIKLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 691
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 692 LSWVPAHKGIGGNEKVDKLVSSGIR 716
>gi|37935861|gb|AAO47112.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE A+L AL+ + +V I+TDS+ L + + + +P ++ I + L+ ++
Sbjct: 628 AELMAVLLALQD----SKEKVNIVTDSQYVLGIISSQPTQSDSP--IVQQIIEELTKKEQ 681
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE +D+L + R
Sbjct: 682 ----VYLTWVPAHKGIGGNEKIDKLVSKDIR 708
>gi|22532283|gb|AAM97877.1|AF492623_2 pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 314 EVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGN 373
EV I+TDS+ CL ++ ++ + + S L+ I + L ++ V WV H GI GN
Sbjct: 646 EVNIVTDSQYCLGIIQ--AQPDKSESELVSQIIEQLIKKEK----VYLXWVPAHKGIGGN 699
Query: 374 EAVDRLAKETAR 385
E VD+L R
Sbjct: 700 EQVDKLVSSGIR 711
>gi|160285878|pdb|2QK9|A Chain A, Human Rnase H Catalytic Domain Mutant D210n In Complex
With 18-Mer RnaDNA HYBRID
gi|160285887|pdb|2QKK|A Chain A, Human Rnase H Catalytic Domain Mutant D210n In Complex
With 14-Mer RnaDNA HYBRID
gi|160285888|pdb|2QKK|B Chain B, Human Rnase H Catalytic Domain Mutant D210n In Complex
With 14-Mer RnaDNA HYBRID
gi|160285891|pdb|2QKK|E Chain E, Human Rnase H Catalytic Domain Mutant D210n In Complex
With 14-Mer RnaDNA HYBRID
gi|160285892|pdb|2QKK|F Chain F, Human Rnase H Catalytic Domain Mutant D210n In Complex
With 14-Mer RnaDNA HYBRID
gi|160285895|pdb|2QKK|I Chain I, Human Rnase H Catalytic Domain Mutant D210n In Complex
With 14-Mer RnaDNA HYBRID
gi|160285896|pdb|2QKK|J Chain J, Human Rnase H Catalytic Domain Mutant D210n In Complex
With 14-Mer RnaDNA HYBRID
gi|160285899|pdb|2QKK|M Chain M, Human Rnase H Catalytic Domain Mutant D210n In Complex
With 14-Mer RnaDNA HYBRID
gi|160285900|pdb|2QKK|N Chain N, Human Rnase H Catalytic Domain Mutant D210n In Complex
With 14-Mer RnaDNA HYBRID
gi|160285903|pdb|2QKK|R Chain R, Human Rnase H Catalytic Domain Mutant D210n In Complex
With 14-Mer RnaDNA HYBRID
gi|160285904|pdb|2QKK|S Chain S, Human Rnase H Catalytic Domain Mutant D210n In Complex
With 14-Mer RnaDNA HYBRID
gi|160285907|pdb|2QKK|W Chain W, Human Rnase H Catalytic Domain Mutant D210n In Complex
With 14-Mer RnaDNA HYBRID
Length = 154
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSN 335
+L T AE A +A++ + N++++ T+S + + KN K++
Sbjct: 42 IRLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTNSMFTINGITNWVQGWKKNGWKTS 101
Query: 336 GNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ + F AL L + + ++++ V GH+G GNE DRLA+E A+
Sbjct: 102 AGKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREGAK 150
>gi|308450215|ref|XP_003088218.1| hypothetical protein CRE_20150 [Caenorhabditis remanei]
gi|308248747|gb|EFO92699.1| hypothetical protein CRE_20150 [Caenorhabditis remanei]
Length = 1025
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 53 QRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVKVIQMY 110
QRG E GC + + + + + K K +N++VAW+DL A+ + PHE + + ++ Y
Sbjct: 307 QRGFQE-REGCNESIGILRTAIDVAKGKKRNIAVAWLDLTNAFGSVPHELIKETLESY 363
>gi|441499191|ref|ZP_20981378.1| Ribonuclease HI [Fulvivirga imtechensis AK7]
gi|441437057|gb|ELR70414.1| Ribonuclease HI [Fulvivirga imtechensis AK7]
Length = 159
Score = 40.0 bits (92), Expect = 3.8, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETARGTDALNP 392
V+FIWVRGHAG NE D LA + A G D L P
Sbjct: 114 VKFIWVRGHAGNIENERCDVLAVQAAEGLD-LKP 146
>gi|451169718|gb|AGF32225.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV IITDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQIALQDSGSEVNIITDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|306477875|gb|ADM89312.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ + + S L+ I K L ++ +
Sbjct: 479 LQAIHLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIKQLIQKEK----IY 532
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 533 LAWVPAHKGIGGNEQVDKLVSSGIR 557
>gi|167749784|ref|ZP_02421911.1| hypothetical protein EUBSIR_00751 [Eubacterium siraeum DSM 15702]
gi|167657267|gb|EDS01397.1| ribonuclease HI [Eubacterium siraeum DSM 15702]
gi|291531562|emb|CBK97147.1| RNase HI [Eubacterium siraeum 70/3]
gi|291556330|emb|CBL33447.1| RNase HI [Eubacterium siraeum V10Sc8a]
Length = 149
Score = 40.0 bits (92), Expect = 3.8, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 17/90 (18%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLE----------KLKNTSKSNGNPSHLILDIFKALS 350
L ALKY +VI+ TDSK ++ K + KS+ P+ L +D+++ L
Sbjct: 57 LTALKYPC-----KVILTTDSKYVVDSVTKGWVNGWKRRGWKKSDNTPA-LNVDLWERLL 110
Query: 351 HLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
L + + V F W++GHAG NE DRLA
Sbjct: 111 PLLDTH-DVEFRWIKGHAGHPENERCDRLA 139
>gi|376405303|gb|AFB37566.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1005
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ S EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 636 LQAIHLASQDSGLEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 689
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 690 LAWVPAHKGIGGNEKVDKLVSTGIR 714
>gi|156254409|gb|ABU62694.1| RNase H [Human immunodeficiency virus 1]
Length = 120
Score = 40.0 bits (92), Expect = 3.8, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ +K + + S L+ I + L + ++ V
Sbjct: 39 LQAIYLALQDSGSEVNIVTDSQYALGIIQ--AKPDKSESELVNQIIEQLINKEK----VY 92
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 93 LTWVPAHKGIGGNEQVDKLVSNGIR 117
>gi|262199557|ref|YP_003270766.1| ribonuclease H [Haliangium ochraceum DSM 14365]
gi|262082904|gb|ACY18873.1| ribonuclease H [Haliangium ochraceum DSM 14365]
Length = 215
Score = 40.0 bits (92), Expect = 3.8, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQE 354
AE AI +AL+ V+ +V++ +DS + L K N +++ + L
Sbjct: 127 AELVAIERALEAVAPEDARQVVVHSDSSYAIGLLSKGWKPKAN-----VELVGRIRALTA 181
Query: 355 WNISVRFIWVRGHAGIAGNEAVDRLAKE 382
+RF+ V+GHAGI NE D LA++
Sbjct: 182 AVRRLRFVKVKGHAGIPENERCDELARD 209
>gi|373842390|gb|AEY77184.1| pol protein, partial [Human immunodeficiency virus]
Length = 1003
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSEAEVNIVTDSQYALGJIQ--AQPDKSESELVNQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE +D+L R
Sbjct: 688 LAWVPAHKGIGGNEQIDKLVSAGIR 712
>gi|343413150|emb|CCD21406.1| reverse transcriptase (RNA-dependent DNA polymerase) [Trypanosoma
vivax Y486]
Length = 573
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 288 NFATIFTAEAFAILQALKYVSSIKE------NEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
+ A + AE A+ LK + + E V+ TDS S L L NT + + +
Sbjct: 242 SLACSYRAECVAMEAGLKRLVEVIELSKTHRTRVVAFTDSLSLLMAL-NTGPAAVEDA-I 299
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
+ I+ + H+ +SV F +V H G+ NEA D+ A++ G YP + D+
Sbjct: 300 LRRIWDLILHIVRLRVSVNFQFVFSHCGVPRNEAADKAAEQ---GNAKPQSYPAWITDI- 355
Query: 402 AVTDMQHEIQ------WRENVMSQNNNKGLF 426
VT ++ +++ + E M++ + L
Sbjct: 356 -VTGVERQVRNEMYRAFEEGRMTRTHRSALL 385
>gi|308459901|ref|XP_003092262.1| hypothetical protein CRE_13754 [Caenorhabditis remanei]
gi|308253675|gb|EFO97627.1| hypothetical protein CRE_13754 [Caenorhabditis remanei]
Length = 1641
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 53 QRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVKVIQMY 110
QRG E GC + + + + + K K +N++VAW+DL A+ + PHE + + ++ Y
Sbjct: 923 QRGFQE-REGCNESIGILRTAIDVAKGKKRNIAVAWLDLTNAFGSVPHELIKETLESY 979
>gi|222428588|gb|ACM50200.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S ++ I + L + + V
Sbjct: 637 LQAISLALQDSEMEVNIVTDSQYALGIIQ--AQPDKSESEIVSQIIEQLINKER----VY 690
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 691 LAWVPAHKGIGGNEQVDKLVSTGIR 715
>gi|256010833|gb|ACU55273.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIYLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LXWVPAHKGIGGNEQVDKLVSXGIR 712
>gi|4324792|gb|AAD17056.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 1427
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
T A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L +
Sbjct: 1051 TTNQKAELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVTQIIEQLIKKE 1108
Query: 354 EWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+S WV H GI GNE VD+L R
Sbjct: 1109 RIYLS----WVPAHKGIGGNEQVDKLVSSGIR 1136
>gi|256010739|gb|ACU55226.1| pol protein [Human immunodeficiency virus 1]
Length = 1000
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 631 LQAIHLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 684
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VDRL R
Sbjct: 685 LAWVPAHKGIGGNEQVDRLVSTGIR 709
>gi|188580140|ref|YP_001923585.1| ribonuclease H [Methylobacterium populi BJ001]
gi|179343638|gb|ACB79050.1| ribonuclease H [Methylobacterium populi BJ001]
Length = 225
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 359 VRFIWVRGHAGIAGNEAVDRLA 380
VR+ WVRGHAG AGNE DRLA
Sbjct: 113 VRWTWVRGHAGEAGNERADRLA 134
>gi|331085555|ref|ZP_08334639.1| hypothetical protein HMPREF0987_00942 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330407442|gb|EGG86944.1| hypothetical protein HMPREF0987_00942 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 293
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 77 CKKKYKNLSVAWIDLLK---AYDNCPHEWMVKVIQMYKIDLKSATFCVFCV--FHGRRLV 131
C KKY + SV + +L Y C +M+ I++ L AT H + +
Sbjct: 154 CAKKYPSFSVGKVSILMNIFVYGIC---FMIFDIEITVYSLIYATVMAMTCDRVHVQNIS 210
Query: 132 IVMSDFNNSDGEDITMSGDCPRDKRGIPPDPGKGSGNATQDDGDQYESAPEYAKQNCFLN 191
+ + F DG + + + +RG+ GKGS T++D + +QN
Sbjct: 211 LSVMIFTKKDGVEQAIMNEM---RRGVTEWEGKGS--YTKEDSKVFVVMISKYEQNEITR 265
Query: 192 EVKDKWPNAYLIFTDGSK 209
V + PNA++IFT+G+K
Sbjct: 266 IVSEIDPNAFMIFTEGAK 283
>gi|238733889|gb|ACR55158.1| pol protein [Human immunodeficiency virus 1]
Length = 1005
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L + +
Sbjct: 633 AELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLINKER---- 686
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ WV H GI GNE VD+L R
Sbjct: 687 IYLAWVPAHKGIGGNEQVDKLVSSGIR 713
>gi|157273983|gb|ABV28257.1| pol protein [Human immunodeficiency virus 1]
Length = 1005
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 636 LQAINLALQDSGLEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 689
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L E R
Sbjct: 690 LAWVPAHKGIGGNEKVDKLVSEGIR 714
>gi|281191147|gb|ADA57073.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1002
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 633 LQAIQLALQDSGSEVNIVTDSQYALGIIQ--TQPDKSESELVNQIIEQLIKKER----VY 686
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L + R
Sbjct: 687 LSWVPAHKGIGGNEQVDKLVSQGIR 711
>gi|86277539|gb|ABC88266.1| pol protein [Human immunodeficiency virus 1]
Length = 1010
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 287 KNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIF 346
K + I T A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I
Sbjct: 627 KAVSLIETTNQKAELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQII 684
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ L + V WV H GI GNE VD+L R
Sbjct: 685 EELIKKDK----VYLSWVPAHKGIGGNEQVDKLVSAGIR 719
>gi|443303121|gb|AGC82460.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 947
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+K +EV I+TDS+ L ++ ++ + + S L+ I + L + V
Sbjct: 578 LQAIKLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER----VY 631
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 632 LSWVPAHKGIGGNEQVDKLVSSGIR 656
>gi|2677845|gb|AAC47810.1| ribonuclease H1 [Drosophila melanogaster]
Length = 333
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLE---------KLKNTSKSNGNPSHLILD 344
E A + A+K + ++ I TDS+ + K ++ N P ++D
Sbjct: 226 VGEIQAAIHAIKTALDLGIQKLCISTDSQFLINSITLWVAGWKKRDWKLKNNQPVKNVVD 285
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
+ LQ+ NI+V++ +V H GI GNE D+LA++
Sbjct: 286 FKELDKLLQDNNITVKWNYVEAHKGIEGNEMADKLARQ 323
>gi|391379436|gb|AFM44094.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 816
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L L+ ++ + + S L+ I + L ++ V
Sbjct: 447 LQAIHLALQDSGSEVNIVTDSQYALGILQ--AQPDKSESELVSQIIEQLIKKEK----VY 500
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 501 LAWVPAHKGIGGNEQVDKLVSAGIR 525
>gi|63098401|gb|AAY32442.1| pol protein [Human immunodeficiency virus 1]
gi|212383245|gb|ACJ25912.1| pol protein [Human immunodeficiency virus 1]
Length = 1000
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L + + +S
Sbjct: 629 AELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLINKERIYLS 686
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L + R
Sbjct: 687 ----WVPAHKGIGGNEQVDKLVSKGIR 709
>gi|373842408|gb|AEY77193.1| pol protein, partial [Human immunodeficiency virus]
Length = 1003
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSEAEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE +D+L R
Sbjct: 688 LAWVPAHKGIGGNEQIDKLVSTGIR 712
>gi|343418078|emb|CCD19849.1| reverse transcriptase (RNA-dependent DNA polymerase) [Trypanosoma
vivax Y486]
Length = 1156
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 288 NFATIFTAEAFAILQALKYVSSIKE------NEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
+ A + AE A+ LK + + E V+ TDS S L L NT + + +
Sbjct: 825 SLACSYRAECVAMEAGLKRLVEVMELSKTHRTRVVAFTDSLSLLMAL-NTGPAAVEDA-I 882
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALNPYPIPVQDVR 401
+ I+ + H+ +SV F +V H G+ NEA D+ A++ G YP + D+
Sbjct: 883 LRRIWDLILHIVRLRVSVNFQFVFSHCGVPRNEAADKAAEQ---GNAKPQSYPAWITDI- 938
Query: 402 AVTDMQHEIQ 411
VT ++ +++
Sbjct: 939 -VTGVERQVR 947
>gi|238734044|gb|ACR55295.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSSGIR 712
>gi|147898893|ref|NP_001084684.1| ribonuclease H1 [Xenopus laevis]
gi|46249528|gb|AAH68735.1| MGC81203 protein [Xenopus laevis]
Length = 300
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSK---SCLEKLKNTSKSNG----- 336
KL+ T AE A +AL+ + ++++ TDS + + K ++ K NG
Sbjct: 187 KLEGRQTNQRAEIQAACRALEQAKAQNLTKLVLYTDSMFTINGITKWIHSWKRNGWKLST 246
Query: 337 NPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+ + + F+ L + + + ++++ + GHAG AGNEA D+L++E AR
Sbjct: 247 GKNVINREDFENLEKMTQ-GLDIKWMHIPGHAGFAGNEAADKLSREGAR 294
>gi|4324774|gb|AAD17038.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 1427
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
T A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L +
Sbjct: 1051 TTNQKAELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVTQIIEQLIKKE 1108
Query: 354 EWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+S WV H GI GNE VD+L R
Sbjct: 1109 RIYLS----WVPAHKGIGGNEQVDKLVSSGIR 1136
>gi|297538709|ref|YP_003674478.1| Ribonuclease H [Methylotenera versatilis 301]
gi|297258056|gb|ADI29901.1| Ribonuclease H [Methylotenera versatilis 301]
Length = 152
Score = 40.0 bits (92), Expect = 4.2, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
D+++AL L + + +V++IWV+GHAG AGNE D LA +
Sbjct: 104 DLWRALDVLAQQH-TVQWIWVKGHAGNAGNERADMLANK 141
>gi|308454871|ref|XP_003090025.1| hypothetical protein CRE_12395 [Caenorhabditis remanei]
gi|308266866|gb|EFP10819.1| hypothetical protein CRE_12395 [Caenorhabditis remanei]
Length = 1241
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 53 QRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVKVIQMY 110
QRG E GC + + + + + K K +N++VAW+DL A+ + PHE + + ++ Y
Sbjct: 923 QRGFQE-REGCNESIGILRTAIDVAKGKKRNIAVAWLDLTNAFGSVPHELIKETLESY 979
>gi|55139253|gb|AAV41277.1| pol protein [Human immunodeficiency virus 1]
gi|212383144|gb|ACJ25868.1| pol protein [Human immunodeficiency virus 1]
Length = 1000
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L +
Sbjct: 629 AELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKER---- 682
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L + R
Sbjct: 683 VYLAWVPAHKGIGGNEQVDKLVSKGIR 709
>gi|325635527|gb|ADZ33373.1| pol protein [Human immunodeficiency virus 1]
gi|325635565|gb|ADZ33406.1| pol protein [Human immunodeficiency virus 1]
gi|325635572|gb|ADZ33412.1| pol protein [Human immunodeficiency virus 1]
gi|325635579|gb|ADZ33418.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSSGIR 712
>gi|288188476|gb|ADC42712.1| pol protein [Human immunodeficiency virus 1]
Length = 664
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 578 LQAIHLALQDSGAEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIRKEK----VY 631
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE +D+L K R
Sbjct: 632 LAWVPAHKGIGGNEQIDKLVKAGIR 656
>gi|226348656|gb|ACO50647.1| pol protein [Human immunodeficiency virus 1]
Length = 752
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 407 LQAIYLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 460
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 461 LAWVPAHKGIGGNEQVDKLVSSGIR 485
>gi|154272902|ref|XP_001537303.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415815|gb|EDN11159.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 970
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 26/234 (11%)
Query: 278 NKNSGTFK--LKNFATIFTAEAFAILQAL----KYVSSIKEN----EVIIITDSKSCLEK 327
NK +F L + +F AEA +AL K + + E+ ++ + D+ S +
Sbjct: 693 NKQLASFSAALSPMSHVFDAEAVGACRALECAVKLLPCVTEDSSNPQIWLCLDNTSVIWG 752
Query: 328 LKNTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
+ ++ ++ N ++ + L++ N+ ++ W GH GI GNE DRLAK T
Sbjct: 753 ILGSAAASSNWAY-----NRCHELLRQHNVGLK--WAPGHMGIEGNEEADRLAKRAVSST 805
Query: 388 DA----LNPYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDKKPWFAKA 443
A L P V VR V + R+ +Y+ + KA
Sbjct: 806 AAPAYGLEATPT-VSGVRTVAKQLSQEARRKWWSGACGRLSDWYRGWSFSRPTVEYQVKA 864
Query: 444 IP----LRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
P R + + LRS+H Y + A L C + H++LC
Sbjct: 865 PPELTMPRHALHRWLALRSSHGDFSWYHRRFQHADARLTCVCGHNKSPEHLVLC 918
>gi|325635512|gb|ADZ33360.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSSGIR 712
>gi|308458270|ref|XP_003091481.1| hypothetical protein CRE_03495 [Caenorhabditis remanei]
gi|308256653|gb|EFP00606.1| hypothetical protein CRE_03495 [Caenorhabditis remanei]
Length = 1641
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 53 QRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHEWMVKVIQMY 110
QRG E GC + + + + + K K +N++VAW+DL A+ + PHE + + ++ Y
Sbjct: 923 QRGFQE-REGCNESIGILRTAIDVAKGKKRNIAVAWLDLTNAFGSVPHELIKETLESY 979
>gi|260438424|ref|ZP_05792240.1| ribonuclease HI [Butyrivibrio crossotus DSM 2876]
gi|292809010|gb|EFF68215.1| ribonuclease HI [Butyrivibrio crossotus DSM 2876]
Length = 162
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 344 DIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARG 386
D++K L +E N +V F+WV+GHAG A NE D LA A G
Sbjct: 108 DLWKRLLKAKE-NHNVEFVWVKGHAGHAMNEKCDMLATSAADG 149
>gi|119486507|ref|ZP_01620565.1| ribonuclease H [Lyngbya sp. PCC 8106]
gi|119456409|gb|EAW37540.1| ribonuclease H [Lyngbya sp. PCC 8106]
Length = 254
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 20/130 (15%)
Query: 260 AGYCKVSIRESLWIFDTQNKNSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIIT 319
GY V IR D + + SG F+ F T E A + L+ + K+++V + +
Sbjct: 110 GGYGIVLIR-----GDHREELSGGFQ---FTTNNRMEMMAAIVGLEVLD--KKSKVKLYS 159
Query: 320 DSKSCLEKLK---------NTSKSNGNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGI 370
DSK ++ ++ N K N + D+++ L L + V+F+WV+GHAG
Sbjct: 160 DSKYVVDAIEKGWAERWQANGWKRNKKELAMNPDLWEQLLKLCSQH-QVKFVWVKGHAGN 218
Query: 371 AGNEAVDRLA 380
NE DRLA
Sbjct: 219 RENECCDRLA 228
>gi|37221483|gb|AAQ89870.1| pol protein [Human immunodeficiency virus 1]
Length = 657
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ EV I+TDS+ L L+ +K + + S L+ I + L ++ V
Sbjct: 578 LQAIHLALQDSGLEVNIVTDSQYALGILQ--AKPDKSESELVSQIIEQLIKKEK----VY 631
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 632 LTWVPAHKGIGGNEQVDKLVSAGIR 656
>gi|37221479|gb|AAQ89868.1| pol protein [Human immunodeficiency virus 1]
Length = 657
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ EV I+TDS+ L L+ +K + + S L+ I + L ++ V
Sbjct: 578 LQAIHLALQDSGLEVNIVTDSQYALGILQ--AKPDKSESELVSQIIEQLIKKEK----VY 631
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 632 LTWVPAHKGIGGNEQVDKLVSAGIR 656
>gi|323703339|ref|ZP_08114989.1| Ribonuclease H [Desulfotomaculum nigrificans DSM 574]
gi|333924024|ref|YP_004497604.1| ribonuclease H [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323531702|gb|EGB21591.1| Ribonuclease H [Desulfotomaculum nigrificans DSM 574]
gi|333749585|gb|AEF94692.1| Ribonuclease H [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 154
Score = 40.0 bits (92), Expect = 4.3, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 21/107 (19%)
Query: 294 TAEAFAILQALKYVSSIKEN-EVIIITDSK---SCLEK-----------LKNTSKSNGNP 338
T IL A+ + ++KE+ V + TDS+ + +EK ++N + NP
Sbjct: 42 TNNRMEILAAIVGLEALKESCNVTVYTDSQYLYNAIEKGWAKKWRANGWMRNKKEPALNP 101
Query: 339 SHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
D++ L L E + +V+F+WV+GHAG NE D+LA A+
Sbjct: 102 -----DLWDRLLKLMERH-NVKFVWVKGHAGHPENERCDQLAVAAAK 142
>gi|322711772|gb|EFZ03345.1| reverse transcriptase, putative [Metarhizium anisopliae ARSEF 23]
Length = 1090
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 290 ATIFTAEAFAILQALKYV---SSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIF 346
A +F A A L+ L NE+++ D+ + L+ TS + + L
Sbjct: 611 AEVFDAAANGALEGLWAAVGHPQATANEIVVCLDNLAAATGLRGTSSDSSQAAFLEFQDM 670
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAK 381
AL+H N +VR W+ GH IAGNE D LAK
Sbjct: 671 -ALAH---GNTTVR--WIPGHTNIAGNEQADALAK 699
>gi|312602030|gb|ADQ92569.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E+EV I+TDS+ + ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIYLALQDSESEVNIVTDSQYAIGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSNGIR 712
>gi|55275197|gb|AAV49415.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQASGSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEKVDKLVSAGIR 712
>gi|393225422|gb|EJD33431.1| hypothetical protein AURDEDRAFT_46805, partial [Auricularia
delicata TFB-10046 SS5]
Length = 203
Score = 40.0 bits (92), Expect = 4.4, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 22/172 (12%)
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTDALN-------- 391
+LI +I A H+ ++ W GH GI GNE D AK A G A +
Sbjct: 37 YLINEIHNAARHVVRKG-ALSMTWTPGHEGILGNETADAAAKLAATGPAASSSDRRLPRI 95
Query: 392 ---PYPIPVQDVRAVTDMQHEIQWRENVMSQNNNKGLFYKNLFTITDK-KPWFAKAIPL- 446
P P+ ++ + W + SQ+ Y+ + D P + + L
Sbjct: 96 LRQPLPLSSSALKQAHTADLKAAWTR-LWSQSPR----YRRYAHLNDHLTPTKCRRLLLP 150
Query: 447 --RKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQEC-LEREDMAHIILCCP 495
R+ + +LR+ HA +L++IN + + C C RE + H +L CP
Sbjct: 151 MARRHMSAVTQLRTGHAPLNGHLNRINRSDSAACPSCNHRRETVRHFVLDCP 202
>gi|256011682|gb|ACU55697.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 634 LQAIYLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEELIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSAGIR 712
>gi|256011102|gb|ACU55407.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ +K + + S L+ I + L ++ V
Sbjct: 634 LQAIHLALQDSGSEVNIVTDSQYALGIIQ--AKPDQSESELVNQIIEQLIKKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 LAWVPAHKGIGGNEQVDKLVSTGIR 712
>gi|37682411|gb|AAQ98110.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
T A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L +
Sbjct: 630 TTNQKAELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIQKE 687
Query: 354 EWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
+S WV H GI GNE VD+L R
Sbjct: 688 RIYLS----WVPAHKGIGGNEQVDKLVSSGIR 715
>gi|284192167|gb|ADB82803.1| pol protein [Simian immunodeficiency virus]
Length = 743
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Query: 285 KLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILD 344
K K A T A L+A+K V I+TDS+ L L + + NP
Sbjct: 474 KSKVVALEETTNQKAELEAIKLALQDSGPRVNIVTDSQYALGILTASPDQSDNP------ 527
Query: 345 IFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
I + + L V WV H GI GNE VD+L + R
Sbjct: 528 IVREIIELMIGKEGVYLGWVPAHKGIGGNEQVDKLVSQGIR 568
>gi|427791645|gb|JAA61274.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 891
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 290 ATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKAL 349
+IFTAEA+AIL A K++ +K + +I TDS S ++ LK T K + NP +++ ++ L
Sbjct: 804 TSIFTAEAYAILAAAKHIKQLKLPKAVIYTDSLSVVKALK-TMKKHKNP--VLVSLYTIL 860
Query: 350 SHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
V WV GH I GN D LA
Sbjct: 861 CTSYAVKQRVVVCWVPGHREIPGNMLADELA 891
>gi|297242929|ref|ZP_06926867.1| ribonuclease HI [Gardnerella vaginalis AMD]
gi|296889140|gb|EFH27874.1| ribonuclease HI [Gardnerella vaginalis AMD]
Length = 368
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 358 SVRFIWVRGHAGIAGNEAVDRLAK 381
+V+F+WV+GHAG GNE VD LA+
Sbjct: 140 AVKFVWVKGHAGNEGNEKVDTLAR 163
>gi|91775832|ref|YP_545588.1| RNase HI [Methylobacillus flagellatus KT]
gi|123380476|sp|Q1H190.1|RNH_METFK RecName: Full=Ribonuclease H; Short=RNase H
gi|91709819|gb|ABE49747.1| RNase HI [Methylobacillus flagellatus KT]
Length = 151
Score = 40.0 bits (92), Expect = 4.5, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 296 EAFAILQALKYVSSIKENEVIIITDS----KSCLE-----KLKNTSKSNGNPSHLILDIF 346
E A+++AL+ + ++ V I TDS K E K +N S+ P + D++
Sbjct: 49 ELTAVIRALEALK--RQCSVRIYTDSVYVQKGITEWVHSWKARNWLTSDRKPVKNV-DLW 105
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKE 382
KAL L + + V ++WV+GHAG GNE D LA +
Sbjct: 106 KALDSLVQQH-QVEWVWVKGHAGNVGNERADALANK 140
>gi|225375929|ref|ZP_03753150.1| hypothetical protein ROSEINA2194_01565 [Roseburia inulinivorans DSM
16841]
gi|225212250|gb|EEG94604.1| hypothetical protein ROSEINA2194_01565 [Roseburia inulinivorans DSM
16841]
Length = 211
Score = 40.0 bits (92), Expect = 4.5, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 357 ISVRFIWVRGHAGIAGNEAVDRLAKETARGT 387
I ++F+ V+GH+G+ GNE DRLAKE T
Sbjct: 180 IRIKFVKVKGHSGVDGNEEADRLAKEAVGNT 210
>gi|156044887|ref|XP_001588999.1| hypothetical protein SS1G_09632 [Sclerotinia sclerotiorum 1980]
gi|154694027|gb|EDN93765.1| hypothetical protein SS1G_09632 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 906
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 69/182 (37%), Gaps = 27/182 (14%)
Query: 326 EKLKNTSKSNGNPSHLILDIFKA---------LSHLQEWNISVRFIWVRGHAGIAGNEAV 376
+ L+ S NG+ + D K L H I VR WV GH I GNE
Sbjct: 686 DALRLGSHFNGSSQRVFEDFLKLTQAWAVRPRLPHTSPGKIRVR--WVPGHLDIPGNEIA 743
Query: 377 DRLAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQ---NNNKGLFYKNL-FT 432
D+ AKE + P P+ + + ++ I+ R N + N +YK+L F
Sbjct: 744 DKAAKEGTK-------LPFPLNPICTLASLKRMIRTRANKADEQLWNTVSPQYYKDLQFN 796
Query: 433 ITDKKPWFA-KAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHII 491
T + K L + +RS H+ AY N ++ C +R+ H
Sbjct: 797 HTSNTDTLSLKRATLHHILA----IRSQHSDFAAYHEHFNHTIAHVHCSCNKRKTPLHFF 852
Query: 492 LC 493
C
Sbjct: 853 FC 854
>gi|119507248|dbj|BAF42488.1| Pol [Human immunodeficiency virus 1]
gi|119507258|dbj|BAF42497.1| Pol [Human immunodeficiency virus 1]
Length = 1003
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ ++EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 632 AELQAIQLALQDSKSEVNIVTDSQYALGIIQ--AQPDRSESELVNQIIEQLIKKEK---- 685
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 686 VYLSWVPAHKGIGGNEQVDKLVSNGIR 712
>gi|415709535|ref|ZP_11463160.1| ribonuclease H [Gardnerella vaginalis 6420B]
gi|388056207|gb|EIK79083.1| ribonuclease H [Gardnerella vaginalis 6420B]
Length = 376
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 358 SVRFIWVRGHAGIAGNEAVDRLAK 381
+V+F+WV+GHAG GNE VD LA+
Sbjct: 140 AVKFVWVKGHAGNEGNEKVDTLAR 163
>gi|37221358|gb|AAQ89808.1| pol protein [Human immunodeficiency virus 1]
Length = 657
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ B + S L+ I + L ++ V
Sbjct: 578 LQAIHLALQDSGSEVNIVTDSQYALGIIQ--AQPBKSESELVSQIIEQLIKKEK----VY 631
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 632 LAWVPAHKGIGGNEQVDKLVSAGIR 656
>gi|339507629|gb|AEJ81226.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ + + S L+ I + L + ++ V
Sbjct: 575 LQAIXLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLINKEK----VY 628
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 629 LAWVPAHKGIGGNEQVDKLVSAGIR 653
>gi|301787875|ref|XP_002929354.1| PREDICTED: ribonuclease H1-like [Ailuropoda melanoleuca]
Length = 285
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSN 335
+L T AE A +A++ + ++++ TDS + + KN K++
Sbjct: 173 IRLPGRQTNQRAEIHAACKAIEQAKAQNIKKLVLYTDSMFTINGITNWVQGWKKNGWKTS 232
Query: 336 GNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ + F AL L + + ++++ V GH+G GNE DRLA+E A+ ++
Sbjct: 233 TGKEVINKEDFVALEQLTQ-GMDIQWMHVPGHSGFTGNEEADRLAREGAKQSE 284
>gi|376408359|gb|AFB40309.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1002
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 633 LQAINLALQDSGSEVNIVTDSQYALGTIQ--AQPDRSESELVSQIIEQLIKKEK----VY 686
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 687 LAWVPAHKGIGGNEQVDKLVSSGIR 711
>gi|108860396|dbj|BAE95918.1| Pol [Human immunodeficiency virus 1]
Length = 1003
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ ++EV I+TDS+ L ++ ++ + + S L+ I + L ++
Sbjct: 632 AELQAIQLALQDSKSEVNIVTDSQYALGIIQ--AQPDRSESELVNQIIEQLIKKEK---- 685
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 686 VYLSWVPAHKGIGGNEQVDKLVSNGIR 712
>gi|363583946|gb|AEW27509.1| pol protein [Human immunodeficiency virus 1]
Length = 1005
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 636 LQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDESESELVNQIIEQLIKKEK----VY 689
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L + R
Sbjct: 690 LSWVPAHKGIGGNEQVDKLVSQGIR 714
>gi|22596273|gb|AAN03061.1|AF457056_2 pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+K +V I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 633 LQAIKLALQDSGQKVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEELIKKEQ----VY 686
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 687 LAWVPAHKGIGGNEQVDKLVSNGIR 711
>gi|451169777|gb|AGF32274.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1010
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L +
Sbjct: 639 AELQAIQLALQDSGSEVNIVTDSQYALGIIQ--TQPDKSESELVNQIIEQLIQKER---- 692
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 693 VYLSWVPAHKGIGGNEQVDKLVSSGIR 719
>gi|339507246|gb|AEJ81035.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 280 NSGTFKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPS 339
N G K+ +F T LQA++ +EV I+TDS+ L ++ ++ + + S
Sbjct: 556 NRGRQKVVSFPD--TTNQKTELQAIRLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSES 611
Query: 340 HLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
L+ I + L + + V WV H GI GNE VD+L R
Sbjct: 612 ELVSQIIEQLINKDK----VYLAWVPAHKGIGGNEQVDKLVSNGIR 653
>gi|288187848|gb|ADC42411.1| pol protein [Human immunodeficiency virus 1]
Length = 670
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+K EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 578 LQAIKLALQDSGAEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 631
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE +D+L R
Sbjct: 632 LAWVPAHKGIGGNEQIDKLVSAGIR 656
>gi|281341314|gb|EFB16898.1| hypothetical protein PANDA_019509 [Ailuropoda melanoleuca]
Length = 241
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSN 335
+L T AE A +A++ + ++++ TDS + + KN K++
Sbjct: 129 IRLPGRQTNQRAEIHAACKAIEQAKAQNIKKLVLYTDSMFTINGITNWVQGWKKNGWKTS 188
Query: 336 GNPSHLILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETARGTD 388
+ + F AL L + + ++++ V GH+G GNE DRLA+E A+ ++
Sbjct: 189 TGKEVINKEDFVALEQLTQ-GMDIQWMHVPGHSGFTGNEEADRLAREGAKQSE 240
>gi|395507260|ref|XP_003757945.1| PREDICTED: ribonuclease H1 [Sarcophilus harrisii]
Length = 206
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 295 AEAFAILQALKYVSSIKENEVIIITDSKSCLEKL--------KNTSKSNGNPSHLILDIF 346
AE A +A++ + +++++ TDS + + KN K++ + + F
Sbjct: 103 AEIHAACKAIEQAKNQNISKLVLYTDSMFTINGITSWVKDWKKNGWKTSTGKEVINKEDF 162
Query: 347 KALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
L L + I +++I V GH+G AGNE DRLA+E A+
Sbjct: 163 VKLDTLIQ-GIDIKWIHVPGHSGFAGNEEADRLAREGAK 200
>gi|339507677|gb|AEJ81250.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ J ++ ++ + + S L+ I + L ++ V
Sbjct: 575 LQAIYLALQDSELEVNIVTDSQYAJGIIQ--AQPDKSESELVSQIIEZLIKKEK----VY 628
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 629 LAWVPAHKGIGGNEQVDKLVSSGIR 653
>gi|291543457|emb|CBL16566.1| RNase HI [Ruminococcus champanellensis 18P13]
Length = 144
Score = 39.7 bits (91), Expect = 4.7, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 307 VSSIKEN-EVIIITDSKSCLE----------KLKNTSKSNGNPSHLILDIFKALSHLQEW 355
+S++KE +V + TDSK ++ K K KS+ P+ L +D+++ L L E
Sbjct: 55 LSALKEPCDVTLTTDSKYVVDSITKGWVYGWKRKGWIKSDKKPA-LNVDLWERLLPLLER 113
Query: 356 NISVRFIWVRGHAGIAGNEAVDRLA 380
+ V+F+WV+GHAG NE D LA
Sbjct: 114 H-QVQFVWVKGHAGHPENERCDALA 137
>gi|256011548|gb|ACU55630.1| pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 633 LQAIYLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLIKKEK----VY 686
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 687 LAWVPAHKGIGGNEQVDKLVSXGIR 711
>gi|86753543|gb|ABD14972.1| pol protein [Human immunodeficiency virus 1]
Length = 999
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L + ++ +S
Sbjct: 628 AELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLINKEKIYLS 685
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L + R
Sbjct: 686 ----WVPAHKGIGGNEQVDKLVSKGIR 708
>gi|376406742|gb|AFB38857.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1002
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 633 LQAINLALQDSGSEVNIVTDSQDALGIIQ--AQPDRSESELVSQIIEQLIKKEK----VY 686
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 687 LAWVPAHKGIGGNEQVDKLVSSGIR 711
>gi|321453396|gb|EFX64636.1| hypothetical protein DAPPUDRAFT_333996 [Daphnia pulex]
Length = 292
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 284 FKLKNFATIFTAEAFAILQALKYVSSIKE--NEVIIITDSKSCLEKLKNTSKSNGNPSHL 341
+ L ++IFTA+ AI QALK + + E II +DS S + + + S S
Sbjct: 167 WTLTKGSSIFTAKVTAIYQALKLFYDMDDCPPEAIIYSDSSSAIIAISSNSLSEN---EA 223
Query: 342 ILDIFKALSHLQEWNISVRFIWVRGHAGIAGNEAVDRLA 380
I + ++ L+ R W+ H GI GNE DRLA
Sbjct: 224 ITATREIIASLKSSGTRTRLTWIPSHTGIEGNERTDRLA 262
>gi|156032633|ref|XP_001585154.1| hypothetical protein SS1G_14014 [Sclerotinia sclerotiorum 1980]
gi|154699416|gb|EDN99154.1| hypothetical protein SS1G_14014 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 322
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 66/180 (36%), Gaps = 27/180 (15%)
Query: 328 LKNTSKSNGNPSHLILDIFK---------ALSHLQEWNISVRFIWVRGHAGIAGNEAVDR 378
L+ S NG+ + D K L H I VR WV GH I GNE D+
Sbjct: 104 LRLGSHFNGSSQRVFEDFLKLTQAWAVRPRLPHTSPGKIRVR--WVPGHLDIPGNEIADK 161
Query: 379 LAKETARGTDALNPYPIPVQDVRAVTDMQHEIQWRENVMSQ---NNNKGLFYKNLFT--I 433
AKE + P P+ + + ++ I+ R N + N +YK+L
Sbjct: 162 AAKEGTK-------LPFPLNPICTLASLKRMIRTRANKADEQLWNTVSPQYYKDLQLNHT 214
Query: 434 TDKKPWFAKAIPLRKFIVTFNRLRSNHAICQAYLHKINIAPTNLCQECLEREDMAHIILC 493
++ K L + +RS H AY + N + C +R+ H C
Sbjct: 215 SNTDTLSLKRATLHHILA----IRSQHGDFAAYHERFNHTTAYVHCSCGKRKTPLHFFFC 270
>gi|17046553|gb|AAL34590.1| pol protein [Human immunodeficiency virus 1]
Length = 999
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 294 TAEAFAILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQ 353
TA LQA++ +EV I+TDS+ L ++ ++ + + S L+ I + L +
Sbjct: 623 TANQKTELQAIQLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIQKE 680
Query: 354 EWNISVRFIWVRGHAGIAGNEAVDRLAKETAR 385
V WV H GI GNE VD+L R
Sbjct: 681 R----VYLSWVPAHKGIGGNEQVDKLVSSGIR 708
>gi|308458458|ref|XP_003091569.1| hypothetical protein CRE_23181 [Caenorhabditis remanei]
gi|308255719|gb|EFO99671.1| hypothetical protein CRE_23181 [Caenorhabditis remanei]
Length = 1672
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 46 NNILPMEQRGCLEGATGCKDLLMLDKIITEDCKKKYKNLSVAWIDLLKAYDNCPHE 101
N +L QRG E GC + + + + + K K ++LSVAW+DL A+ + PHE
Sbjct: 951 NGVLSKCQRGFQE-REGCNESIGILRTAIDVAKGKKRDLSVAWLDLTNAFGSVPHE 1005
>gi|306477475|gb|ADM89112.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 479 LQAIYLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEELIKKEK----VY 532
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VDRL R
Sbjct: 533 LAWVPAHKGIGGNEQVDRLVSTGIR 557
>gi|222428514|gb|ACM50141.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ +EV I+TDS+ L ++ ++ + + S L+ I + L + ++ V
Sbjct: 634 LQAIHLALQDSGSEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEQLINKEK----VY 687
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 688 MAWVPAHKGIGGNEKVDKLVSSGIR 712
>gi|87137490|gb|ABD27960.1| pol protein [Simian immunodeficiency virus]
Length = 296
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 299 AILQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNIS 358
A LQA++ E+EV I+TDS+ L ++ ++ + + S ++ I + L + +S
Sbjct: 31 AELQAIQLALQDSESEVNIVTDSQYALGIIQ--AQPDKSESEIVNQIIENLIKKERIYLS 88
Query: 359 VRFIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 89 ----WVPAHKGIGGNEQVDKLVSSGVR 111
>gi|13891916|gb|AAG50337.1| pol polyprotein [Human immunodeficiency virus 1]
Length = 560
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 479 LQAIHLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVNQIIEQLIKKEK----VY 532
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 533 LAWVPAHKGIGGNEQVDKLVSAGIR 557
>gi|327458391|gb|AEA76635.1| pol protein [Human immunodeficiency virus 1]
Length = 560
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 301 LQALKYVSSIKENEVIIITDSKSCLEKLKNTSKSNGNPSHLILDIFKALSHLQEWNISVR 360
LQA+ E EV I+TDS+ L ++ ++ + + S L+ I + L ++ V
Sbjct: 479 LQAIYLALQDSELEVNIVTDSQYALGIIQ--AQPDKSESELVSQIIEELIKKEK----VY 532
Query: 361 FIWVRGHAGIAGNEAVDRLAKETAR 385
WV H GI GNE VD+L R
Sbjct: 533 LAWVPAHKGIGGNEQVDKLVSAGIR 557
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,477,733,091
Number of Sequences: 23463169
Number of extensions: 448636866
Number of successful extensions: 977885
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 1527
Number of HSP's that attempted gapping in prelim test: 976616
Number of HSP's gapped (non-prelim): 2058
length of query: 659
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 510
effective length of database: 8,863,183,186
effective search space: 4520223424860
effective search space used: 4520223424860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)