BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15453
(247 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TJF|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJG|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
Length = 254
Score = 282 bits (722), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 130/192 (67%), Positives = 156/192 (81%), Gaps = 6/192 (3%)
Query: 45 DHREGWTNAVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLA 104
DH + A + KPAPYW+GTAV+DG KE+KLTDYRGKYLVFFFYPLDFTFVCPTE++A
Sbjct: 54 DHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIA 113
Query: 105 LNEKIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEI 164
++++EF I EVV SVDS FTH AWIN+ ++ L ++IPLLSDLTH+I
Sbjct: 114 FGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGL------GPIRIPLLSDLTHQI 167
Query: 165 SRDYGVYLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEA 224
S+DYGVYLED GH+LRGLFIID +GI+RQITLNDLPVGRSV+ETLRLV+AFQYTD+HGE
Sbjct: 168 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEV 227
Query: 225 CPSGWQPGQRTI 236
CP+GW+PG TI
Sbjct: 228 CPAGWKPGSETI 239
>pdb|3TKP|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKQ|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKS|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 282 bits (721), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 130/192 (67%), Positives = 156/192 (81%), Gaps = 6/192 (3%)
Query: 45 DHREGWTNAVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLA 104
DH + A + KPAPYW+GTAV+DG KE+KLTDYRGKYLVFFFYPLDFTFVCPTE++A
Sbjct: 46 DHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIA 105
Query: 105 LNEKIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEI 164
++++EF I EVV SVDS FTH AWIN+ ++ L ++IPLLSDLTH+I
Sbjct: 106 FGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGL------GPIRIPLLSDLTHQI 159
Query: 165 SRDYGVYLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEA 224
S+DYGVYLED GH+LRGLFIID +GI+RQITLNDLPVGRSV+ETLRLV+AFQYTD+HGE
Sbjct: 160 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEV 219
Query: 225 CPSGWQPGQRTI 236
CP+GW+PG TI
Sbjct: 220 CPAGWKPGSETI 231
>pdb|3TJB|A Chain A, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|B Chain B, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|C Chain C, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|D Chain D, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|E Chain E, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
Length = 254
Score = 282 bits (721), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 130/192 (67%), Positives = 156/192 (81%), Gaps = 6/192 (3%)
Query: 45 DHREGWTNAVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLA 104
DH + A + KPAPYW+GTAV+DG KE+KLTDYRGKYLVFFFYPLDFTFVCPTE++A
Sbjct: 54 DHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIA 113
Query: 105 LNEKIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEI 164
++++EF I EVV SVDS FTH AWIN+ ++ L ++IPLLSDLTH+I
Sbjct: 114 FGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGL------GPIRIPLLSDLTHQI 167
Query: 165 SRDYGVYLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEA 224
S+DYGVYLED GH+LRGLFIID +GI+RQITLNDLPVGRSV+ETLRLV+AFQYTD+HGE
Sbjct: 168 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEV 227
Query: 225 CPSGWQPGQRTI 236
CP+GW+PG TI
Sbjct: 228 CPAGWKPGSETI 239
>pdb|3TKR|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|I Chain I, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|G Chain G, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|F Chain F, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|H Chain H, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|J Chain J, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
Length = 246
Score = 280 bits (715), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 129/192 (67%), Positives = 155/192 (80%), Gaps = 6/192 (3%)
Query: 45 DHREGWTNAVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLA 104
DH + A + KPAPYW+GTAV+DG KE+KLTDYRGKYLVFFFYPLDFTFVCPTE++A
Sbjct: 46 DHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIA 105
Query: 105 LNEKIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEI 164
++++EF I EVV SVDS F H AWIN+ ++ L ++IPLLSDLTH+I
Sbjct: 106 FGDRLEEFRSINTEVVACSVDSQFEHLAWINTPRRQGGL------GPIRIPLLSDLTHQI 159
Query: 165 SRDYGVYLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEA 224
S+DYGVYLED GH+LRGLFIID +GI+RQITLNDLPVGRSV+ETLRLV+AFQYTD+HGE
Sbjct: 160 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEV 219
Query: 225 CPSGWQPGQRTI 236
CP+GW+PG TI
Sbjct: 220 CPAGWKPGSETI 231
>pdb|3TJK|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
Length = 254
Score = 279 bits (713), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 129/192 (67%), Positives = 155/192 (80%), Gaps = 6/192 (3%)
Query: 45 DHREGWTNAVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLA 104
DH + A + KPAPYW+GTAV+DG KE+KLTDYRGKYLVFFFYPLDFTFVCPTE++A
Sbjct: 54 DHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIA 113
Query: 105 LNEKIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEI 164
++++EF I EVV SVDS FTH AWIN+ ++ L ++IPLLSDLTH+I
Sbjct: 114 FGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGL------GPIRIPLLSDLTHQI 167
Query: 165 SRDYGVYLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEA 224
S+DYGVYLED GH+LRGLFIID +GI+RQITLNDLPVGRSV+ETLRLV+AFQYTD+HGE
Sbjct: 168 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEV 227
Query: 225 CPSGWQPGQRTI 236
P+GW+PG TI
Sbjct: 228 APAGWKPGSETI 239
>pdb|3TKS|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 278 bits (711), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 129/192 (67%), Positives = 155/192 (80%), Gaps = 6/192 (3%)
Query: 45 DHREGWTNAVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLA 104
DH + A + KPAPYW+GTAV+DG KE+KLTDYRGKYLVFFFYPLDFTFV PTE++A
Sbjct: 46 DHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVXPTEIIA 105
Query: 105 LNEKIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEI 164
++++EF I EVV SVDS FTH AWIN+ ++ L ++IPLLSDLTH+I
Sbjct: 106 FGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGL------GPIRIPLLSDLTHQI 159
Query: 165 SRDYGVYLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEA 224
S+DYGVYLED GH+LRGLFIID +GI+RQITLNDLPVGRSV+ETLRLV+AFQYTD+HGE
Sbjct: 160 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEV 219
Query: 225 CPSGWQPGQRTI 236
CP+GW+PG TI
Sbjct: 220 CPAGWKPGSETI 231
>pdb|2PN8|A Chain A, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|B Chain B, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|C Chain C, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|D Chain D, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|E Chain E, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|F Chain F, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|G Chain G, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|H Chain H, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|I Chain I, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|J Chain J, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
Length = 211
Score = 277 bits (708), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 126/179 (70%), Positives = 150/179 (83%), Gaps = 6/179 (3%)
Query: 58 PAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGA 117
PAPYW+GTAV+DG KE+KLTDYRGKYLVFFFYPLDFTFVCPTE++A ++++EF I
Sbjct: 24 PAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINT 83
Query: 118 EVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGH 177
EVV SVDS FTH AWIN+ ++ L ++IPLLSDLTH+IS+DYGVYLED GH
Sbjct: 84 EVVACSVDSQFTHLAWINTPRRQGGLGP------IRIPLLSDLTHQISKDYGVYLEDSGH 137
Query: 178 SLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPGQRTI 236
+LRGLFIID +GI+RQITLNDLPVGRSV+ETLRLV+AFQYTD+HGE CP+GW+PG TI
Sbjct: 138 TLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 196
>pdb|3QPM|A Chain A, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|B Chain B, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|C Chain C, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|D Chain D, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|E Chain E, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
Length = 240
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 155/192 (80%), Gaps = 6/192 (3%)
Query: 45 DHREGWTNAVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLA 104
DH + A + KPAP W+GTAV++G KE+KL+DYRGKYLVFFFYPLDFTFVCPTE++A
Sbjct: 40 DHSLHLSKAKISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIA 99
Query: 105 LNEKIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEI 164
++++ EF I EVV SVDS FTH AWI + +K L +KIPLLSDLTH+I
Sbjct: 100 FSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGL------GPMKIPLLSDLTHQI 153
Query: 165 SRDYGVYLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEA 224
S+DYGVYLED+GH+LRGLFIID +G++RQIT+NDLPVGRSV+ETLRLV+AFQYTD+HGE
Sbjct: 154 SKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQYTDKHGEV 213
Query: 225 CPSGWQPGQRTI 236
CP+GW+PG TI
Sbjct: 214 CPAGWKPGSDTI 225
>pdb|3TJJ|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
Length = 254
Score = 275 bits (702), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 154/192 (80%), Gaps = 6/192 (3%)
Query: 45 DHREGWTNAVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLA 104
DH + A + KPAPYW+GTAV+DG KE+KLTDYRGKYLVFFFYPLDFTFV PTE++A
Sbjct: 54 DHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVXPTEIIA 113
Query: 105 LNEKIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEI 164
++++EF I EVV SVDS FTH AWIN+ ++ L ++IPLLSDLTH+I
Sbjct: 114 FGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGL------GPIRIPLLSDLTHQI 167
Query: 165 SRDYGVYLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEA 224
S+DYGVYLED GH+LRGLFIID +GI+RQITLNDLPVGRSV+ETLRLV+AFQYTD+HGE
Sbjct: 168 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEV 227
Query: 225 CPSGWQPGQRTI 236
P+GW+PG TI
Sbjct: 228 APAGWKPGSETI 239
>pdb|1QMV|A Chain A, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|B Chain B, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|C Chain C, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|D Chain D, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|E Chain E, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|F Chain F, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|G Chain G, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|H Chain H, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|I Chain I, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|J Chain J, Thioredoxin Peroxidase B From Red Blood Cells
Length = 197
Score = 250 bits (639), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 149/194 (76%), Gaps = 6/194 (3%)
Query: 52 NAVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDE 111
NA + KPAP +K TAVVDG KE+KL+DY+GKY+V FFYPLDFTFV PTE++A + + ++
Sbjct: 4 NARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVXPTEIIAFSNRAED 63
Query: 112 FHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVY 171
F K+G EV+GVSVDS FTH AWIN+ +K+ L L IPLL+D+T +S DYGV
Sbjct: 64 FRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGP------LNIPLLADVTRRLSEDYGVL 117
Query: 172 LEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQP 231
D+G + RGLFIID +G++RQIT+NDLPVGRSV+E LRLV+AFQYTDEHGE CP+GW+P
Sbjct: 118 KTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEHGEVCPAGWKP 177
Query: 232 GQRTISNREEDEKE 245
G TI +D KE
Sbjct: 178 GSDTIKPNVDDSKE 191
>pdb|1QQ2|A Chain A, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23.
pdb|1QQ2|B Chain B, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23
Length = 199
Score = 240 bits (613), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 145/195 (74%), Gaps = 7/195 (3%)
Query: 52 NAVVMKPAPYWKGTAVV-DGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKID 110
NA + PAP +K TAV+ DG K+I L+DY+GKY+VFFFYPLDFTFVCPTE++A +++ +
Sbjct: 5 NAKIGHPAPSFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAE 64
Query: 111 EFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGV 170
EF K+ +V+G SVDSHF+H AWIN+ KK L N IPL+SD I++DYGV
Sbjct: 65 EFKKLNCQVIGASVDSHFSHLAWINTPKKQGGLGPMN------IPLVSDPKRTIAQDYGV 118
Query: 171 YLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQ 230
D+G S RGLFIID +GI+RQIT+NDLPVGRSV+E LRLV+AFQ+TD+HGE CP+GW+
Sbjct: 119 LKADEGISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKHGEVCPAGWK 178
Query: 231 PGQRTISNREEDEKE 245
PG TI KE
Sbjct: 179 PGSDTIKPDVNKSKE 193
>pdb|2RII|A Chain A, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
pdb|2RII|B Chain B, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
Length = 199
Score = 238 bits (608), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 146/195 (74%), Gaps = 7/195 (3%)
Query: 52 NAVVMKPAPYWKGTAVV-DGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKID 110
NA + PAP +K TAV+ DG K+I L+DY+GKY+VFFFYPLDFTFVCPTE++A +++ +
Sbjct: 5 NAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAE 64
Query: 111 EFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGV 170
EF K+ ++V+G SVDSHF H AW+N+ KK L N IPL+SD I++DYGV
Sbjct: 65 EFKKLNSQVIGASVDSHFEHLAWVNTPKKQGGLGPMN------IPLVSDPKRTIAQDYGV 118
Query: 171 YLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQ 230
D+G S RGLFIID +GI+RQIT+NDLPVGRSV+ETLRLV+AFQ+TD+HGE P+GW+
Sbjct: 119 LKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVSPAGWK 178
Query: 231 PGQRTISNREEDEKE 245
PG TI + KE
Sbjct: 179 PGSDTIKPDVQKSKE 193
>pdb|1ZYE|A Chain A, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|B Chain B, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|C Chain C, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|D Chain D, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|E Chain E, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|F Chain F, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|G Chain G, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|H Chain H, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|I Chain I, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|J Chain J, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|K Chain K, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|L Chain L, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
Length = 220
Score = 236 bits (601), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 138/192 (71%), Gaps = 6/192 (3%)
Query: 54 VVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFH 113
V + APY+KGTAVV G KEI L D++GKYLV FFYPLDFTFVCPTE++A ++K EFH
Sbjct: 28 AVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFH 87
Query: 114 KIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLE 173
+ EVV VSVDSHF+H AWIN+ +K+ L N I LLSDLT +ISRDYGV LE
Sbjct: 88 DVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMN------IALLSDLTKQISRDYGVLLE 141
Query: 174 DKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPGQ 233
G +LRGLFIID G+++ +++NDLPVGRSVEETLRLV+AFQ+ + HGE P+ W P
Sbjct: 142 GPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVEAHGEVSPANWTPES 201
Query: 234 RTISNREEDEKE 245
TI +E
Sbjct: 202 PTIKPHPTASRE 213
>pdb|2Z9S|A Chain A, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|B Chain B, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|C Chain C, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|D Chain D, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|E Chain E, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|F Chain F, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|G Chain G, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|H Chain H, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|I Chain I, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|J Chain J, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
Length = 199
Score = 235 bits (600), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 143/195 (73%), Gaps = 7/195 (3%)
Query: 52 NAVVMKPAPYWKGTAVV-DGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKID 110
NA + PAP +K TAV+ DG K+I L+DY+GKY+VFFFYPLDFTFV PTE++A +++ +
Sbjct: 5 NAKIGHPAPSFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVSPTEIIAFSDRAE 64
Query: 111 EFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGV 170
EF K+ +V+G SVDSHF H AWIN+ KK L N IPL+SD I++DYGV
Sbjct: 65 EFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMN------IPLVSDPKRTIAQDYGV 118
Query: 171 YLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQ 230
D+G S RGLFIID +GI+RQIT+NDLPVGRSV+E LRLV+AFQ+TD+HGE CP+GW+
Sbjct: 119 LKADEGISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKHGEVCPAGWK 178
Query: 231 PGQRTISNREEDEKE 245
PG TI KE
Sbjct: 179 PGSDTIKPDVNKSKE 193
>pdb|3HY2|A Chain A, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
pdb|3HY2|B Chain B, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
Length = 206
Score = 231 bits (588), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 144/195 (73%), Gaps = 7/195 (3%)
Query: 52 NAVVMKPAPYWKGTAVV-DGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKID 110
NA + PAP +K TAV+ DG K+I L+DY+GKY+VFFFYPLDFTFV PTE++A +++ +
Sbjct: 5 NAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVDPTEIIAFSDRAE 64
Query: 111 EFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGV 170
EF K+ ++V+G SVDSHF H W+N+ KK L N IPL+SD I++DYGV
Sbjct: 65 EFKKLNSQVIGASVDSHFEHLEWVNTPKKQGGLGPMN------IPLVSDPKRTIAQDYGV 118
Query: 171 YLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQ 230
D+G S RGLFIID +GI+RQIT+NDLPVGRSV+ETLRLV+AFQ+TD+HGE P+GW+
Sbjct: 119 LKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVSPAGWK 178
Query: 231 PGQRTISNREEDEKE 245
PG TI + KE
Sbjct: 179 PGSDTICPDVQKSKE 193
>pdb|3ZTL|A Chain A, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|B Chain B, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|C Chain C, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|D Chain D, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|E Chain E, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|F Chain F, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|G Chain G, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|H Chain H, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|I Chain I, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|J Chain J, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
Length = 222
Score = 215 bits (548), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 136/190 (71%), Gaps = 9/190 (4%)
Query: 50 WTNAVVM---KPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALN 106
W + +V+ +PAP +KG AV++G KEI L DYRGKY+V FFYP DFTFVCPTE++A +
Sbjct: 34 WGSTMVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFS 93
Query: 107 EKIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISR 166
++++EF+ +V+ S DS ++H AW DN +K L +KIPLL+D EIS+
Sbjct: 94 DQVEEFNSRNCQVIACSTDSQYSHLAW------DNLDRKSGGLGHMKIPLLADRKQEISK 147
Query: 167 DYGVYLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACP 226
YGV+ E+ G++ RGLFIID GI+RQIT+ND PVGRSV+ETLRL+ AFQ+ ++HGE CP
Sbjct: 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEKHGEVCP 207
Query: 227 SGWQPGQRTI 236
W+ GQ I
Sbjct: 208 VNWKRGQHGI 217
>pdb|3ZVJ|D Chain D, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 215 bits (547), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 131/180 (72%), Gaps = 6/180 (3%)
Query: 57 KPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIG 116
+PAP +KG AV++G KEI L DYRGKY+V FFYP DFTFVCPTE++A +++++EF+
Sbjct: 41 RPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRN 100
Query: 117 AEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKG 176
+V+ S DS ++H AW DN +K L +KIPLL+D EIS+ YGV+ E+ G
Sbjct: 101 CQVIACSTDSQYSHLAW------DNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDG 154
Query: 177 HSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPGQRTI 236
++ RGLFIID GI+RQITLND PVGRSV+ETLRL+ AFQ+ ++HGE CP W+ GQ I
Sbjct: 155 NAFRGLFIIDPNGILRQITLNDKPVGRSVDETLRLLDAFQFVEKHGEVCPVNWKRGQHGI 214
>pdb|3ZVJ|A Chain A, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|B Chain B, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|C Chain C, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|E Chain E, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|F Chain F, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|G Chain G, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|H Chain H, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|I Chain I, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|J Chain J, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|K Chain K, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|L Chain L, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|M Chain M, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|N Chain N, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|O Chain O, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|P Chain P, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|Q Chain Q, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|R Chain R, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|S Chain S, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|T Chain T, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 214 bits (545), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 131/180 (72%), Gaps = 6/180 (3%)
Query: 57 KPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIG 116
+PAP +KG AV++G KEI L DYRGKY+V FFYP DFTFVCPTE++A +++++EF+
Sbjct: 41 RPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRN 100
Query: 117 AEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKG 176
+V+ S DS ++H AW DN +K L +KIPLL+D EIS+ YGV+ E+ G
Sbjct: 101 CQVIACSTDSQYSHLAW------DNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDG 154
Query: 177 HSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPGQRTI 236
++ RGLFIID GI+RQIT+ND PVGRSV+ETLRL+ AFQ+ ++HGE CP W+ GQ I
Sbjct: 155 NAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEKHGEVCPVNWKRGQHGI 214
>pdb|3SBC|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|E Chain E, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|F Chain F, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|G Chain G, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|H Chain H, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|I Chain I, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|J Chain J, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
Length = 216
Score = 199 bits (507), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 129/193 (66%), Gaps = 6/193 (3%)
Query: 53 AVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEF 112
A V K AP +K TAVVDG E+ L Y+GKY+V F PL FTFV PTE++A +E +F
Sbjct: 23 AQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKF 82
Query: 113 HKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYL 172
+ GA+V+ S DS ++ AW N +K+ L N IPLL+D H +SRDYGV +
Sbjct: 83 EEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPIN------IPLLADTNHSLSRDYGVLI 136
Query: 173 EDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPG 232
E++G +LRGLFIID +G++R IT+NDLPVGR+V+E LRLV AFQ+TD++G P W PG
Sbjct: 137 EEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQWTDKNGTVLPCNWTPG 196
Query: 233 QRTISNREEDEKE 245
TI ED KE
Sbjct: 197 AATIKPTVEDSKE 209
>pdb|1UUL|A Chain A, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|B Chain B, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|C Chain C, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|D Chain D, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|E Chain E, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|F Chain F, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|G Chain G, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|H Chain H, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|I Chain I, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|J Chain J, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
Length = 202
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 131/191 (68%), Gaps = 7/191 (3%)
Query: 56 MKPAPYWKGTAVV-DGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHK 114
+ PAP + TA++ +G K++ LT Y+GK+LV FFYP+DFTFVCPTE+ ++++ EF
Sbjct: 9 LHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD 68
Query: 115 IGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLED 174
IG EV+ S+DS ++H AW + +K L + N IP+L+D T I + YGV E+
Sbjct: 69 IGCEVLACSMDSEYSHLAWTSIERKRGGLGQMN------IPILADKTKCIMKSYGVLKEE 122
Query: 175 KGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPGQR 234
G + RGLFIID + +RQIT+NDLPVGR V+E LRLV+AFQ+ ++HGE CP+ W+PG +
Sbjct: 123 DGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQFVEKHGEVCPANWKPGDK 182
Query: 235 TISNREEDEKE 245
T+ E KE
Sbjct: 183 TMKPDPEKSKE 193
>pdb|3TUE|A Chain A, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|B Chain B, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|C Chain C, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|D Chain D, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|E Chain E, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
Length = 219
Score = 191 bits (484), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 129/182 (70%), Gaps = 7/182 (3%)
Query: 52 NAVVMKPAPYWKGTAVV-DGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKID 110
NA + PAP ++ A++ +G+ K+I L+ Y+GK++V FFYPLDFTFVCPTEV+A ++ +
Sbjct: 25 NAKINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVS 84
Query: 111 EFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGV 170
F+++ EV+ S+DS + H W +L+ +K L + IP+L+D T I+R YGV
Sbjct: 85 RFNELNCEVLACSIDSEYAHLQW--TLQD----RKKGGLGTMAIPILADKTKNIARSYGV 138
Query: 171 YLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQ 230
E +G + RGLFIID G++RQIT+ND+PVGRSVEE LRL+ AFQ+ ++HGE CP+ W+
Sbjct: 139 LEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQFVEKHGEVCPANWK 198
Query: 231 PG 232
G
Sbjct: 199 KG 200
>pdb|1E2Y|A Chain A, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|B Chain B, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|C Chain C, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|D Chain D, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|E Chain E, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|F Chain F, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|G Chain G, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|H Chain H, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|I Chain I, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|J Chain J, Tryparedoxin Peroxidase From Crithidia Fasciculata
Length = 188
Score = 170 bits (430), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 111/176 (63%), Gaps = 7/176 (3%)
Query: 58 PAPYWKGTAVV-DGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIG 116
PAP + A+ +G K++ L+ Y+GKY+V FFYP DFTFVCPTE++ ++ F +I
Sbjct: 11 PAPEFDDXALXPNGTFKKVSLSSYKGKYVVLFFYPXDFTFVCPTEIIQFSDDAKRFAEIN 70
Query: 117 AEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKG 176
EV+ S DS ++H W + +K L IP L+D T I+R YGV ED G
Sbjct: 71 TEVISCSCDSEYSHLQWTSVDRKKGGL------GPXAIPXLADKTKAIARAYGVLDEDSG 124
Query: 177 HSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPG 232
+ RG+FIID G +RQI +ND P+GR+VEE +RLV A Q+ +EHGE CP+ W+ G
Sbjct: 125 VAYRGVFIIDPNGKLRQIIINDXPIGRNVEEVIRLVEALQFVEEHGEVCPANWKKG 180
>pdb|2H66|A Chain A, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|B Chain B, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|C Chain C, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|D Chain D, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|E Chain E, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|F Chain F, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|G Chain G, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|H Chain H, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|I Chain I, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|J Chain J, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2I81|A Chain A, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|B Chain B, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|C Chain C, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|D Chain D, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|E Chain E, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
Length = 213
Score = 163 bits (412), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 126/195 (64%), Gaps = 9/195 (4%)
Query: 55 VMKPAPYWKGTAVV-DGNIKEIKLTDYRGK-YLVFFFYPLDFTFVCPTEVLALNEKIDEF 112
V K AP++K AV D + E+ LT + GK Y++ +FYPLDFTFVCP+E++AL++ +D F
Sbjct: 23 VGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAF 82
Query: 113 HKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYL 172
H+ E++G SVDS +TH AW K L K + +K LLSD+T IS+DY V
Sbjct: 83 HERNVELLGCSVDSKYTHLAW-----KKTPLAKGG-IGNIKHTLLSDITKSISKDYNVLF 136
Query: 173 EDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPG 232
+D SLR +ID GIV+ + +N+L +GRSV+E LR++ A Q+ +++G+ CP+ WQ G
Sbjct: 137 DDS-VSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQHHEKYGDVCPANWQKG 195
Query: 233 QRTISNREEDEKEEL 247
+ ++ EE + L
Sbjct: 196 KVSMKPSEEGVAQYL 210
>pdb|2H01|A Chain A, Py00414- Plasmodium Yoelii Thioredoxin Peroxidase I
Length = 192
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 122/185 (65%), Gaps = 9/185 (4%)
Query: 59 APYWKGTAVV-DGNIKEIKLTDYRGK-YLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIG 116
AP +K AV D E+ L+D+ GK Y++ +FYPLDFTFVCP+E++AL++ +D F +
Sbjct: 6 APSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERN 65
Query: 117 AEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKG 176
E++G SVDS FTH AW K L + + +K L+SD++ I+R Y V L ++
Sbjct: 66 VELLGCSVDSKFTHLAW-----KKTPLSQGG-IGNIKHTLISDISKSIARSYDV-LFNES 118
Query: 177 HSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPGQRTI 236
+LR +ID++G+V+ + +N+L +GRSV+E LRL+ A Q+ +++G+ CP+ WQ G+ ++
Sbjct: 119 VALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQHHEKYGDVCPANWQKGKESM 178
Query: 237 SNREE 241
EE
Sbjct: 179 KPSEE 183
>pdb|1ZOF|A Chain A, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|B Chain B, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|C Chain C, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|D Chain D, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|E Chain E, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|F Chain F, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|G Chain G, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|H Chain H, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|I Chain I, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|J Chain J, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
Length = 198
Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 121/197 (61%), Gaps = 10/197 (5%)
Query: 54 VVMKPAPYWKGTAVVDGN--IKEIKLTDYRGKY-LVFFFYPLDFTFVCPTEVLALNEKID 110
VV K AP +K AV+ N + +L+ GK ++ FF+P DFTFVCPTE++A ++++
Sbjct: 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVK 61
Query: 111 EFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGV 170
+FH+ G V+GVS+DS H AW N+ + + ++ P+++D+T ISRDY V
Sbjct: 62 DFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGI------GQVSFPMVADITKSISRDYDV 115
Query: 171 YLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQ 230
E+ +LRG F+ID+ VR +NDLP+GR+ +E LR+V A + +EHGE CP+GW+
Sbjct: 116 LFEE-AIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHFEEHGEVCPAGWR 174
Query: 231 PGQRTISNREEDEKEEL 247
G + + + E L
Sbjct: 175 KGDKGMKATHQGVAEYL 191
>pdb|2C0D|A Chain A, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
pdb|2C0D|B Chain B, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
Length = 221
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 113/185 (61%), Gaps = 9/185 (4%)
Query: 53 AVVMKPAPYWKGTAVVDGN-IKEIKLTDYRG-KYLVFFFYPLDFTFVCPTEVLALNEKID 110
++V K A + + N I + L+ + G KY FYPL++TFVCPTE++ N+ I
Sbjct: 25 SLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIK 84
Query: 111 EFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGV 170
+F E++G+SVDS ++H AW K+ ++K + ++ L+SD+ +IS++Y V
Sbjct: 85 DFENKNVELLGISVDSVYSHLAW-----KNMPIEKGG-IGNVEFTLVSDINKDISKNYNV 138
Query: 171 YLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQ 230
L D +LRGLFIID+ G VR T+NDLP+GR+V+E LR + + + D GE CP W+
Sbjct: 139 -LYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSIIHVDTSGEVCPINWK 197
Query: 231 PGQRT 235
GQ+
Sbjct: 198 KGQKA 202
>pdb|1YEP|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 103/177 (58%), Gaps = 10/177 (5%)
Query: 62 WKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVG 121
+K A +G E+ D G++ VFFFYP DFTFVCPTE+ + + +E K+G +V
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYS 69
Query: 122 VSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGHSLRG 181
VS D+HFTH+AW +S + K+K ++ D T ++R++ ED+G + R
Sbjct: 70 VSTDTHFTHKAWHSS---------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRA 120
Query: 182 LFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEH-GEACPSGWQPGQRTIS 237
F++D +GI++ I + +GR + LR ++A QY H GE CP+ W+ G+ T++
Sbjct: 121 TFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLA 177
>pdb|1YF1|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|F Chain F, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|G Chain G, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|H Chain H, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|I Chain I, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|J Chain J, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 102/177 (57%), Gaps = 10/177 (5%)
Query: 62 WKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVG 121
+K A +G E+ D G++ VFFFYP DFTFVCPTE+ + + +E K+G +V
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYS 69
Query: 122 VSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGHSLRG 181
VS D+HF H+AW +S + K+K ++ D T ++R++ ED+G + R
Sbjct: 70 VSTDTHFVHKAWHSS---------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRA 120
Query: 182 LFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEH-GEACPSGWQPGQRTIS 237
F++D +GI++ I + +GR + LR ++A QY H GE CP+ W+ G+ T++
Sbjct: 121 TFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLA 177
>pdb|1YF0|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 102/177 (57%), Gaps = 10/177 (5%)
Query: 62 WKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVG 121
+K A +G E+ D G++ VFFFYP DFTFVCPTE+ + + +E K+G +V
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYS 69
Query: 122 VSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGHSLRG 181
VS D+HF H+AW +S + K+K ++ D T ++R++ ED+G + R
Sbjct: 70 VSTDTHFIHKAWHSS---------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRA 120
Query: 182 LFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEH-GEACPSGWQPGQRTIS 237
F++D +GI++ I + +GR + LR ++A QY H GE CP+ W+ G+ T++
Sbjct: 121 TFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLA 177
>pdb|1YEX|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 130 bits (326), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 102/177 (57%), Gaps = 10/177 (5%)
Query: 62 WKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVG 121
+K A +G E+ D G++ VFFFYP DFTFVCPTE+ + + +E K+G +V
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYS 69
Query: 122 VSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGHSLRG 181
VS D+HF H+AW +S + K+K ++ D T ++R++ ED+G + R
Sbjct: 70 VSTDTHFDHKAWHSS---------SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRA 120
Query: 182 LFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEH-GEACPSGWQPGQRTIS 237
F++D +GI++ I + +GR + LR ++A QY H GE CP+ W+ G+ T++
Sbjct: 121 TFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLA 177
>pdb|1N8J|A Chain A, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|B Chain B, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|C Chain C, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|D Chain D, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|E Chain E, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|F Chain F, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|G Chain G, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|H Chain H, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|I Chain I, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|J Chain J, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|K Chain K, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|L Chain L, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|M Chain M, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|N Chain N, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|O Chain O, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|P Chain P, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|Q Chain Q, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|R Chain R, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|S Chain S, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|T Chain T, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
Length = 186
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 13/183 (7%)
Query: 56 MKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKI 115
+KP +K A +G E+ D G++ VFFFYP DFTFV PTE+ + + +E K+
Sbjct: 7 IKP---FKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL 63
Query: 116 GAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDK 175
G +V VS D+HFTH+AW +S + K+K ++ D T ++R++ ED+
Sbjct: 64 GVDVYSVSTDTHFTHKAWHSS---------SETIAKIKYAMIGDPTGALTRNFDNMREDE 114
Query: 176 GHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEH-GEACPSGWQPGQR 234
G + R F++D +GI++ I + +GR + LR ++A QY H GE CP+ W+ G+
Sbjct: 115 GLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEA 174
Query: 235 TIS 237
T++
Sbjct: 175 TLA 177
>pdb|3EMP|A Chain A, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|B Chain B, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|C Chain C, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|D Chain D, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|E Chain E, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
Length = 186
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 13/183 (7%)
Query: 56 MKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKI 115
+KP +K A +G E+ D G++ VFFFYP DFTFVCPTE+ + + +E K+
Sbjct: 7 IKP---FKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKL 63
Query: 116 GAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDK 175
G +V VS D+HFTH+AW +S + K+K ++ D T ++R++ ED+
Sbjct: 64 GVDVYSVSTDTHFTHKAWHSS---------SETIAKIKYAMIGDPTGALTRNFDNMREDE 114
Query: 176 GHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEH-GEACPSGWQPGQR 234
G + R F++D +GI++ I + +GR + LR ++A QY H GE P+ W+ G+
Sbjct: 115 GLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVSPAKWKEGEA 174
Query: 235 TIS 237
T++
Sbjct: 175 TLA 177
>pdb|1WE0|A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|B Chain B, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|C Chain C, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|D Chain D, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|E Chain E, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|F Chain F, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|G Chain G, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|H Chain H, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|I Chain I, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|J Chain J, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
Length = 187
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 94/164 (57%), Gaps = 10/164 (6%)
Query: 74 EIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHRAW 133
E+ D +GK+ + FYP DF+FVCPTE+ + ++ E K+G EV VS D+HF H+AW
Sbjct: 23 EVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAW 82
Query: 134 INSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGHSLRGLFIIDREGIVRQ 193
+NS + ++ ++ D + ISR + V E+ G + RG FIID +G+++
Sbjct: 83 -----HENS----PAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQA 133
Query: 194 ITLNDLPVGRSVEETLRLVRAFQYTDEH-GEACPSGWQPGQRTI 236
I +N +GR + V+A QY E+ GE CP+ W+ G T+
Sbjct: 134 IEINADGIGRDASTLINKVKAAQYVRENPGEVCPAKWEEGGETL 177
>pdb|2BMX|A Chain A, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|B Chain B, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|C Chain C, Mycobacterium Tuberculosis Ahpc
Length = 195
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 26/193 (13%)
Query: 60 PYWKGTAVVDGNIKEIKLT------------DYRGKYLVFFFYPLDFTFVCPTEVLALNE 107
P ++ TA++ G++ ++ ++ GK+ V FF+P DFTFVCPTE+ A ++
Sbjct: 11 PAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSK 70
Query: 108 KIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRD 167
DEF A+++GVS+DS F H W + N L L P LSD+ E+S+
Sbjct: 71 LNDEFEDRDAQILGVSIDSEFAHFQW---------RAQHNDLKTLPFPXLSDIKRELSQA 121
Query: 168 YGVYLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPS 227
GV L G + R FI+D ++ ++ VGR+V+E LR++ A Q E C S
Sbjct: 122 AGV-LNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ----SDELCAS 176
Query: 228 GWQPGQRTISNRE 240
W+ G T+ E
Sbjct: 177 NWRKGDPTLDAGE 189
>pdb|2E2G|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
Length = 250
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 94/159 (59%), Gaps = 11/159 (6%)
Query: 75 IKLTDY---RGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHR 131
IKL D+ +GK+ V F +P DFT VC TE ++ + ++F ++G +++G+SVDS F+H
Sbjct: 24 IKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHI 83
Query: 132 AWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYG-VYLEDKGHSLRGLFIIDREGI 190
W +++ + ++ P+++D ++R G ++ E H++RG+FI+D G+
Sbjct: 84 KWKEWIERHIGV-------RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGV 136
Query: 191 VRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGW 229
+R + + +GR V+E LR+V+A + D A P+ W
Sbjct: 137 IRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADW 175
>pdb|3A2V|A Chain A, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|B Chain B, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|C Chain C, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|D Chain D, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|E Chain E, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|F Chain F, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|G Chain G, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|H Chain H, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|I Chain I, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|J Chain J, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
Length = 249
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 94/159 (59%), Gaps = 11/159 (6%)
Query: 75 IKLTDY---RGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHR 131
IKL D+ +GK+ V F +P DFT VC TE ++ + ++F ++G +++G+SVDS F+H
Sbjct: 23 IKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHI 82
Query: 132 AWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYG-VYLEDKGHSLRGLFIIDREGI 190
W +++ + ++ P+++D ++R G ++ E H++RG+FI+D G+
Sbjct: 83 KWKEWIERHIGV-------RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGV 135
Query: 191 VRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGW 229
+R + + +GR V+E LR+V+A + D A P+ W
Sbjct: 136 IRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADW 174
>pdb|3A5W|A Chain A, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|B Chain B, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|C Chain C, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|D Chain D, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|E Chain E, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|F Chain F, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|G Chain G, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|H Chain H, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|I Chain I, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|J Chain J, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
Length = 249
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 94/159 (59%), Gaps = 11/159 (6%)
Query: 75 IKLTDY---RGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHR 131
IKL D+ +GK+ V F +P DFT VC TE ++ + ++F ++G +++G+SVDS F+H
Sbjct: 23 IKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHI 82
Query: 132 AWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYG-VYLEDKGHSLRGLFIIDREGI 190
W +++ + ++ P+++D ++R G ++ E H++RG+FI+D G+
Sbjct: 83 KWKEWIERHIGV-------RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGV 135
Query: 191 VRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGW 229
+R + + +GR V+E LR+V+A + D A P+ W
Sbjct: 136 IRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADW 174
>pdb|1X0R|A Chain A, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|B Chain B, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|C Chain C, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|D Chain D, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|E Chain E, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|F Chain F, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|G Chain G, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|H Chain H, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|I Chain I, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|J Chain J, Thioredoxin Peroxidase From Aeropyrum Pernix K1
Length = 249
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 92/159 (57%), Gaps = 11/159 (6%)
Query: 75 IKLTDY---RGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHR 131
IKL D+ +GK+ V F +P DFT VC TE ++ + ++F ++G +++G+SVDS F+H
Sbjct: 23 IKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHI 82
Query: 132 AWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYG-VYLEDKGHSLRGLFIIDREGI 190
W +++ + ++ P+++D ++R G ++ E H++RG+FI+D G+
Sbjct: 83 KWKEWIERHIGV-------RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGV 135
Query: 191 VRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGW 229
+R +GR V+E LR+V+A + D A P+ W
Sbjct: 136 IRTXLYYPXELGRLVDEILRIVKALKLGDSLKRAVPADW 174
>pdb|3A2W|A Chain A, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|B Chain B, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|C Chain C, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|D Chain D, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|E Chain E, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|F Chain F, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|G Chain G, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|H Chain H, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|I Chain I, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|J Chain J, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2X|A Chain A, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|B Chain B, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|C Chain C, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|D Chain D, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|E Chain E, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|F Chain F, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|G Chain G, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|H Chain H, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|I Chain I, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|J Chain J, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
Length = 249
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 93/159 (58%), Gaps = 11/159 (6%)
Query: 75 IKLTDY---RGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHR 131
IKL D+ +GK+ V F +P DFT V TE ++ + ++F ++G +++G+SVDS F+H
Sbjct: 23 IKLPDHYVSQGKWFVLFSHPADFTPVSTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHI 82
Query: 132 AWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYG-VYLEDKGHSLRGLFIIDREGI 190
W +++ + ++ P+++D ++R G ++ E H++RG+FI+D G+
Sbjct: 83 KWKEWIERHIGV-------RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGV 135
Query: 191 VRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGW 229
+R + + +GR V+E LR+V+A + D A P+ W
Sbjct: 136 IRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADW 174
>pdb|2E2M|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2NVL|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
Length = 250
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 93/159 (58%), Gaps = 11/159 (6%)
Query: 75 IKLTDY---RGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHR 131
IKL D+ +GK+ V F +P DFT V TE ++ + ++F ++G +++G+SVDS F+H
Sbjct: 24 IKLPDHYVSQGKWFVLFSHPADFTPVXTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHI 83
Query: 132 AWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYG-VYLEDKGHSLRGLFIIDREGI 190
W +++ + ++ P+++D ++R G ++ E H++RG+FI+D G+
Sbjct: 84 KWKEWIERHIGV-------RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGV 136
Query: 191 VRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGW 229
+R + + +GR V+E LR+V+A + D A P+ W
Sbjct: 137 IRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADW 175
>pdb|2ZCT|A Chain A, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|B Chain B, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|C Chain C, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|D Chain D, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|E Chain E, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|F Chain F, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|G Chain G, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|H Chain H, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|I Chain I, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|J Chain J, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
Length = 249
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 93/159 (58%), Gaps = 11/159 (6%)
Query: 75 IKLTDY---RGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHR 131
IKL D+ +GK+ V F +P DFT V TE ++ + ++F ++G +++G+SVDS F+H
Sbjct: 23 IKLPDHYVSQGKWFVLFSHPADFTPVXTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHI 82
Query: 132 AWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYG-VYLEDKGHSLRGLFIIDREGI 190
W +++ + ++ P+++D ++R G ++ E H++RG+FI+D G+
Sbjct: 83 KWKEWIERHIGV-------RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGV 135
Query: 191 VRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGW 229
+R + + +GR V+E LR+V+A + D A P+ W
Sbjct: 136 IRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADW 174
>pdb|2CV4|A Chain A, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|B Chain B, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|C Chain C, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|D Chain D, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|E Chain E, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|F Chain F, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|G Chain G, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|H Chain H, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|I Chain I, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|J Chain J, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
Length = 250
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 91/159 (57%), Gaps = 11/159 (6%)
Query: 75 IKLTDY---RGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHR 131
IKL D+ +GK+ V F +P DFT V TE ++ + ++F ++G +++G+SVDS F+H
Sbjct: 24 IKLPDHYVSQGKWFVLFSHPADFTPVXTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHI 83
Query: 132 AWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYG-VYLEDKGHSLRGLFIIDREGI 190
W +++ + ++ P+++D ++R G ++ E H++RG+FI+D G+
Sbjct: 84 KWKEWIERHIGV-------RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGV 136
Query: 191 VRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGW 229
+R +GR V+E LR+V+A + D A P+ W
Sbjct: 137 IRTXLYYPXELGRLVDEILRIVKALKLGDSLKRAVPADW 175
>pdb|2V2G|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V32|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V41|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|E Chain E, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|F Chain F, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|G Chain G, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|H Chain H, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
Length = 233
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 68 VDGNIKEIKLTDYRGK-YLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDS 126
D I ++K D+ G + V F +P DFT V TE+ + + +F K G +++ +S D+
Sbjct: 14 ADSTIGKLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDN 73
Query: 127 HFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGHS------LR 180
H+ W +K + +K D + P+++D T E++ G+ D+ S R
Sbjct: 74 VADHKEWSEDVKCLSGVKGD-----MPYPIIADETRELAVKLGMVDPDERTSTGMPLTCR 128
Query: 181 GLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPGQRTI 236
+FII + ++ L GR+ E LR++ + Q T + A P+ WQPG R +
Sbjct: 129 AVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQLTAQKKVATPADWQPGDRCM 184
>pdb|2YWN|A Chain A, Crystal Structure Of Peroxiredoxin-Like Protein From
Sulfolobus Tokodaii
pdb|4G2E|A Chain A, Crystal Structure Of A Dimeric Prxq From Sulfolobus
Tokodaii
Length = 157
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 18/137 (13%)
Query: 69 DGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHF 128
D +K++KL+ +GK +V FYP FT VC E+ + + +F+++ A V+G+SVD F
Sbjct: 17 DTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPF 76
Query: 129 THRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLED---KGHSL--RGLF 183
+++A+ K+ N+L+ +LSD E+ + Y V E G+ L R +F
Sbjct: 77 SNKAF----------KEHNKLN---FTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVF 123
Query: 184 IIDREGIVRQITLNDLP 200
+ID+EG VR ++D P
Sbjct: 124 VIDKEGKVRYKWVSDDP 140
>pdb|1XCC|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 16/184 (8%)
Query: 68 VDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSH 127
+DG+ + K + + + F +P DFT VC TE+ L + ++F K+ +++G S +S
Sbjct: 19 IDGDFELYKYIE--NSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSK 76
Query: 128 FTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGH------SLRG 181
+H WI +K +L+K +IP++ D + E++ + E + + R
Sbjct: 77 ESHDKWI------EDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRC 130
Query: 182 LFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPGQR--TISNR 239
LF I E ++ L GR+ E LR++++ Q T A P W G + I
Sbjct: 131 LFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQLTYTTPVATPVNWNEGDKCCVIPTL 190
Query: 240 EEDE 243
++DE
Sbjct: 191 QDDE 194
>pdb|3HJP|A Chain A, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|B Chain B, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|C Chain C, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|D Chain D, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
Length = 164
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 78/132 (59%), Gaps = 19/132 (14%)
Query: 67 VVDGNIKEIKL-TDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVD 125
+VD ++K++K+ +D++GK +V FYP FT V E+ + + +F+++ A V+G+SVD
Sbjct: 13 LVDTDLKKVKIPSDFKGKVVVLAFYPAAFTSVSTKEMSTFRDSMAKFNEVNAVVIGISVD 72
Query: 126 SHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLE---DKGHSL--R 180
F+++A+ K+ N+++ ++SD E + YGV E KG+ L R
Sbjct: 73 PPFSNKAF----------KEQNKIN---FTIVSDFNREAVKAYGVAGELPILKGYVLAKR 119
Query: 181 GLFIIDREGIVR 192
+F+ID+ GIVR
Sbjct: 120 SVFVIDKNGIVR 131
>pdb|3TB2|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 68 VDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSH 127
+DG+ + K + + + F +P DFT V TE+ L + ++F K+ +++G S +S
Sbjct: 19 IDGDFELYKYIE--NSWAILFSHPNDFTPVXTTELAELGKMHEDFLKLNCKLIGFSCNSK 76
Query: 128 FTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGH------SLRG 181
+H WI +K +L+K +IP++ D + E++ + E + + R
Sbjct: 77 ESHDKWI------EDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRC 130
Query: 182 LFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPGQR--TISNR 239
LF I E ++ L GR+ E LR++++ Q T A P W G + I
Sbjct: 131 LFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQLTYTTPVATPVNWNEGDKCCVIPTL 190
Query: 240 EEDE 243
++DE
Sbjct: 191 QDDE 194
>pdb|1XXU|A Chain A, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|B Chain B, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|C Chain C, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|D Chain D, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
Length = 153
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 69 DGNIKEIKLTDYRG-KYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSH 127
D N + + L YRG K ++ F+PL FT +C E+ L + + EF + + +SV
Sbjct: 15 DQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPP 74
Query: 128 FTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDL--THEISRDYGVYLEDKGHSLRGLFII 185
TH+ W PLLSD +S+ YGV+ E G + RG F++
Sbjct: 75 PTHKIWATQ-------------SGFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVV 121
Query: 186 DREGIVR 192
DR GI+R
Sbjct: 122 DRSGIIR 128
>pdb|1XVW|A Chain A, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
pdb|1XVW|B Chain B, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
Length = 160
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 16/127 (12%)
Query: 69 DGNIKEIKLTDYRG-KYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSH 127
D N + + L YRG K ++ F+PL FT + E+ L + + EF + + +SV
Sbjct: 22 DQNQQLVTLRGYRGAKNVLLVFFPLAFTGIXQGELDQLRDHLPEFENDDSAALAISVGPP 81
Query: 128 FTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDL--THEISRDYGVYLEDKGHSLRGLFII 185
TH+ W PLLSD +S+ YGV+ E G + RG F++
Sbjct: 82 PTHKIWATQ-------------SGFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVV 128
Query: 186 DREGIVR 192
DR GI+R
Sbjct: 129 DRSGIIR 135
>pdb|4GQC|A Chain A, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|B Chain B, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|C Chain C, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|D Chain D, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
Length = 164
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 81 RGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKD 140
RG+ V F+P F+ VC E+ +K+ + K AEV+ +SVDS W LKK
Sbjct: 32 RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDS-----PW--CLKK- 83
Query: 141 NSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLED-KGHSL---RGLFIIDREGIVRQITL 196
K +NR L LLSD E+ + Y VY ED KG + R +FI+ +G V +
Sbjct: 84 --FKDENR---LAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWV 138
Query: 197 NDLPVG 202
D P+
Sbjct: 139 TDNPLN 144
>pdb|1PRX|A Chain A, Horf6 A Novel Human Peroxidase Enzyme
pdb|1PRX|B Chain B, Horf6 A Novel Human Peroxidase Enzyme
Length = 224
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 71 NIKEIKLTDYRG-KYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFT 129
+ I+ D+ G + + F +P DFT V TE+ + EF K +++ +S+DS
Sbjct: 19 TVGRIRFHDFLGDSWGILFSHPRDFTPVXTTELGRAAKLAPEFAKRNVKLIALSIDSVED 78
Query: 130 HRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVY----LEDKGHSL--RGLF 183
H AW + NS + +KL P++ D E++ G+ ++KG + R +F
Sbjct: 79 HLAWSKDINAYNS---EEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVF 135
Query: 184 IIDREGIVRQITLNDLPVGRSVEETLRLVRAFQYTDEHGEACPSGWQPG 232
+ + ++ L GR+ +E LR+V + Q T E A P W+ G
Sbjct: 136 VFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWKDG 184
>pdb|2CX3|A Chain A, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|B Chain B, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|C Chain C, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|D Chain D, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX4|A Chain A, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|B Chain B, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|C Chain C, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|D Chain D, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|E Chain E, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|F Chain F, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|G Chain G, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|H Chain H, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|4GQF|A Chain A, Aeropyrum Pernix Peroxiredoxin Q Enzyme In The Locally
Unfolded Conformation
pdb|4GQF|B Chain B, Aeropyrum Pernix Peroxiredoxin Q Enzyme In The Locally
Unfolded Conformation
Length = 164
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 81 RGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKD 140
RG+ V F+P F+ VC E+ +K + K AEV+ +SVDS W LKK
Sbjct: 32 RGRPAVLIFFPAAFSPVCTKELCTFRDKXAQLEKANAEVLAISVDS-----PW--CLKK- 83
Query: 141 NSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLED----KGHSLRGLFIIDREGIVRQITL 196
K +NR L LLSD E+ + Y VY ED K + R +FI+ +G V +
Sbjct: 84 --FKDENR---LAFNLLSDYNREVIKLYNVYHEDLKGLKXVAKRAVFIVKPDGTVAYKWV 138
Query: 197 NDLPVG 202
D P+
Sbjct: 139 TDNPLN 144
>pdb|3GKK|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped IntermediateLIGAND COMPLEX
STRUCTURES
Length = 163
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 51 TNAVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKID 110
T+AV+ PA + + G + L + G +LV +FYP D T C TE L N +
Sbjct: 5 TDAVLELPAATFDLPLSLSGGT-QTTLRAHAGHWLVIYFYPKDSTPGCTTEGLDFNALLP 63
Query: 111 EFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGV 170
EF K GA+++GVS DS +H DN K PL+SD + R + V
Sbjct: 64 EFDKAGAKILGVSRDSVKSH---------DNFCAKQG----FAFPLVSDGDEALCRAFDV 110
Query: 171 YLEDK--GHSLRGL----FIIDREGIVRQ 193
E G + G+ F++ EG V Q
Sbjct: 111 IKEKNMYGKQVLGIERSTFLLSPEGQVVQ 139
>pdb|3DRN|A Chain A, The Crystal Structure Of Bcp1 From Sulfolobus Sulfataricus
pdb|3DRN|B Chain B, The Crystal Structure Of Bcp1 From Sulfolobus Sulfataricus
Length = 161
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 27/163 (16%)
Query: 59 APYWKGTAVVDGNIKEIKLTDYRGKY-LVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGA 117
AP ++G A N ++I L+DY GK+ +V +FYP D T E A + D
Sbjct: 8 APLFEGIA---DNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDV 64
Query: 118 EVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIP--LLSDLTHEISRDYGVYLEDK 175
V+GVS D +H+ + +K K+P L+SD +I YG K
Sbjct: 65 VVIGVSSDDINSHKRF---------------KEKYKLPFILVSDPDKKIRELYGA----K 105
Query: 176 GHSL--RGLFIIDREGIVRQITLNDLPVGRSVEETLRLVRAFQ 216
G L R F+ID++GI+R I + + V E L+ ++ +
Sbjct: 106 GFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQIK 148
>pdb|3GKN|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped Intermediate/ligand Complex
Structures
pdb|3GKN|B Chain B, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped Intermediate/ligand Complex
Structures
Length = 163
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 20/149 (13%)
Query: 51 TNAVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKID 110
T+AV+ PA + + G + L + G +LV +FYP D T TE L N +
Sbjct: 5 TDAVLELPAATFDLPLSLSGGT-QTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLP 63
Query: 111 EFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGV 170
EF K GA+++GVS DS +H DN K PL+SD + R + V
Sbjct: 64 EFDKAGAKILGVSRDSVKSH---------DNFCAKQG----FAFPLVSDGDEALCRAFDV 110
Query: 171 YLEDK--GHSLRGL----FIIDREGIVRQ 193
E G + G+ F++ EG V Q
Sbjct: 111 IKEKNMYGKQVLGIERSTFLLSPEGQVVQ 139
>pdb|3GKM|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped IntermediateLIGAND COMPLEX
STRUCTURES
Length = 163
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 20/149 (13%)
Query: 51 TNAVVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKID 110
T+AV+ PA + + G + L + G +LV +FYP D T TE L N +
Sbjct: 5 TDAVLELPAATFDLPLSLSGGT-QTTLRAHAGHWLVIYFYPKDSTPGSTTEGLDFNALLP 63
Query: 111 EFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGV 170
EF K GA+++GVS DS +H DN K PL+SD + R + V
Sbjct: 64 EFDKAGAKILGVSRDSVKSH---------DNFSAKQG----FAFPLVSDGDEALCRAFDV 110
Query: 171 YLEDK--GHSLRGL----FIIDREGIVRQ 193
E G + G+ F++ EG V Q
Sbjct: 111 IKEKNMYGKQVLGIERSTFLLSPEGQVVQ 139
>pdb|3IXR|A Chain A, Crystal Structure Of Xylella Fastidiosa Prxq C47s Mutant
Length = 179
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 77 LTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHRAW 133
L+DY ++LV +FYP D T TE L N + +F +I A V+GVS DS +H ++
Sbjct: 46 LSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSF 102
>pdb|4EO3|A Chain A, Peroxiredoxin Nitroreductase Fusion Enzyme
pdb|4EO3|B Chain B, Peroxiredoxin Nitroreductase Fusion Enzyme
Length = 322
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 19/116 (16%)
Query: 78 TDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHRAWINSL 137
D GKY + FF+P T E + + + F K A+VVG+S DS + +L
Sbjct: 20 VDLYGKYTILFFFPKAGTSGSTREAVEFSR--ENFEK--AQVVGISRDS-------VEAL 68
Query: 138 KKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGHSLRGLFIIDREGIVRQ 193
K+ K+ N LK+ LLSD I ++ LE+ G ++R F+IDR G VR+
Sbjct: 69 KR---FKEKN---DLKVTLLSD-PEGILHEFFNVLEN-GKTVRSTFLIDRWGFVRK 116
>pdb|1PSQ|A Chain A, Structure Of A Probable Thiol Peroxidase From
Streptococcus Pneumoniae
pdb|1PSQ|B Chain B, Structure Of A Probable Thiol Peroxidase From
Streptococcus Pneumoniae
Length = 163
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 13/124 (10%)
Query: 71 NIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTH 130
++ + L D+ GK V P T +C T+ NE++ V+ VS D F
Sbjct: 31 DLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGLDN--TVVLTVSXDLPFAQ 88
Query: 131 RAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGHSLRGLFIIDREGI 190
+ W + DN++ + D H RDY + + + R +F++D +
Sbjct: 89 KRWCGAEGLDNAIXLSDYFD-----------HSFGRDYALLINEWHLLARAVFVLDTDNT 137
Query: 191 VRQI 194
+R +
Sbjct: 138 IRYV 141
>pdb|1XVQ|A Chain A, Crystal Structure Of Thiol Peroxidase From Mycobacterium
Tuberculosis
Length = 175
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 21/141 (14%)
Query: 54 VVMKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFH 113
V PAP + + G++ I +RGK ++ +P T VC T V +E+
Sbjct: 19 AVGSPAPAFT---LTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERA---A 72
Query: 114 KIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLE 173
GA V+ VS D F + + + +N + S DYGV +
Sbjct: 73 ASGATVLXVSKDLPFAQKRFCGAEGTENVMPA------------SAFRDSFGEDYGVTIA 120
Query: 174 D---KGHSLRGLFIIDREGIV 191
D G R + +I +G V
Sbjct: 121 DGPMAGLLARAIVVIGADGNV 141
>pdb|3HDC|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 158
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 22/117 (18%)
Query: 77 LTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHRAWINS 136
L YRGK ++ F+ + C E + + + F K V+ V+V+ F +
Sbjct: 36 LAQYRGKIVLVNFW-ASWCPYCRDEXPSXDRLVKSFPKGDLVVLAVNVEKRFPEKY---- 90
Query: 137 LKKDNSLKKDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGHSLRGLFIIDREGIVRQ 193
R + LSD T ++ + YG + L FI+DR+GI+RQ
Sbjct: 91 -----------RRAPVSFNFLSDATGQVQQRYG------ANRLPDTFIVDRKGIIRQ 130
>pdb|3P7X|A Chain A, Crystal Structure Of An Atypical Two-Cysteine
Peroxiredoxin (Saouhsc_01822) From Staphylococcus Aureus
Nctc8325
pdb|3P7X|B Chain B, Crystal Structure Of An Atypical Two-Cysteine
Peroxiredoxin (Saouhsc_01822) From Staphylococcus Aureus
Nctc8325
pdb|3P7X|C Chain C, Crystal Structure Of An Atypical Two-Cysteine
Peroxiredoxin (Saouhsc_01822) From Staphylococcus Aureus
Nctc8325
pdb|3P7X|D Chain D, Crystal Structure Of An Atypical Two-Cysteine
Peroxiredoxin (Saouhsc_01822) From Staphylococcus Aureus
Nctc8325
Length = 166
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 67 VVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDS 126
V+D ++ ++ L DY GK + P T VC + N + I V+ +S D
Sbjct: 31 VLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASKEEGI---VLTISADL 87
Query: 127 HFTHRAWINSLKKDNSLK-KDNRLDKLKIPLLSDLTHEISRDYGVYLEDKGHSLRGLFII 185
F + W S DN + D+R DL+ +YGV +E+ R +F++
Sbjct: 88 PFAQKRWCASAGLDNVITLSDHR----------DLS--FGENYGVVMEELRLLARAVFVL 135
Query: 186 DREGIV 191
D + V
Sbjct: 136 DADNKV 141
>pdb|2YZH|A Chain A, Crystal Structure Of Peroxiredoxin-Like Protein From
Aquifex Aeolicus
pdb|2YZH|B Chain B, Crystal Structure Of Peroxiredoxin-Like Protein From
Aquifex Aeolicus
pdb|2YZH|C Chain C, Crystal Structure Of Peroxiredoxin-Like Protein From
Aquifex Aeolicus
pdb|2YZH|D Chain D, Crystal Structure Of Peroxiredoxin-Like Protein From
Aquifex Aeolicus
Length = 171
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 17/105 (16%)
Query: 95 TFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKI 154
T VC TE NE + G +V VS+D F + + S N +
Sbjct: 60 TPVCETETKKFNEIMAGME--GVDVTVVSMDLPFAQKRFCESFNIQN------------V 105
Query: 155 PLLSDLTHEISRDYGVYLED---KGHSLRGLFIIDREGIVRQITL 196
+ SD + YGV + + KG R +FIID+EG V + L
Sbjct: 106 TVASDFRYRDMEKYGVLIGEGALKGILARAVFIIDKEGKVAYVQL 150
>pdb|2JSY|A Chain A, Solution Structure Of Tpx In The Oxidized State
pdb|2JSZ|A Chain A, Solution Structure Of Tpx In The Reduced State
Length = 167
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 17/127 (13%)
Query: 67 VVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIG-AEVVGVSVD 125
V+ +++E L D +GK + P T VC + NE E K+G V +S D
Sbjct: 29 VLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNE---EAAKLGDVNVYTISAD 85
Query: 126 SHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSD-LTHEISRDYGVYLEDKGHSLRGLFI 184
F W + N +DK++ LSD +GVY+++ R +F+
Sbjct: 86 LPFAQARWCGA----------NGIDKVET--LSDHRDMSFGEAFGVYIKELRLLARSVFV 133
Query: 185 IDREGIV 191
+D G V
Sbjct: 134 LDENGKV 140
>pdb|1JFU|A Chain A, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
pdb|1JFU|B Chain B, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
Length = 186
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 49 GWTNAVVMKPAPY-WKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNE 107
G A+ M AP A D + K KL+D+RGK L+ + + C E+ AL+E
Sbjct: 26 GEVAALTMASAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLW-ATWCVPCRKEMPALDE 84
Query: 108 KIDEFHKIGAEVVGVSVDSHFTHRAWINSLKKDNSLKKDNRLDKLKIPLLSDLTHEISRD 167
+ EVV +++D+ + + K+ +L + + K + DL I R
Sbjct: 85 LQGKLSGPNFEVVAINIDTRDPEKP--KTFLKEANLTRLGYFNDQKAKVFQDL-KAIGRA 141
Query: 168 YGVYLEDKGHSLRGLFIIDREGIVRQITLNDLPVGRSVEETLRLVR 213
G+ ++D +G +I P + E+ L+L+R
Sbjct: 142 LGMPTS---------VLVDPQGC--EIATIAGPAEWASEDALKLIR 176
>pdb|1F5Q|B Chain B, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|D Chain D, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
Length = 252
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 8/50 (16%)
Query: 117 AEVVGVSVDSHFTHR------AWINSLKKDNSLKKDNRLDKLKIPLLSDL 160
A +VGV+VD HFT + W+ + KD L++DN + L + LL +L
Sbjct: 33 ARMVGVNVDQHFTSQYRKVLTTWMFCVCKD--LRQDNNVFPLAVALLDEL 80
>pdb|1TP9|A Chain A, Prx D (Type Ii) From Populus Tremula
pdb|1TP9|B Chain B, Prx D (Type Ii) From Populus Tremula
pdb|1TP9|C Chain C, Prx D (Type Ii) From Populus Tremula
pdb|1TP9|D Chain D, Prx D (Type Ii) From Populus Tremula
Length = 162
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 82 GKYLVFFFYPLDFTFVCPTE-VLALNEKIDEFHKIGA-EVVGVSVDSHFTHRAWINSLKK 139
GK ++ F P FT C + V EK E G E++ +SV+ F +AW S +
Sbjct: 35 GKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPE 94
Query: 140 DNSLK 144
+ +K
Sbjct: 95 NKHVK 99
>pdb|2LRN|A Chain A, Solution Structure Of A Thiol:disulfide Interchange
Protein From Bacteroides Sp.
pdb|4GRF|A Chain A, Crystal Structure Of Thioredoxin Domain Of Thiol-Disulfide
Oxidoreductase Bvu-2223 (Target Efi-501010) From
Bacteroides Vulgatus
Length = 152
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 75 IKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHKIGAEVVGVSVDSHFTHRAWI 134
+ L D++GKY++ F+ ++ C E L + + F G + GVS D W
Sbjct: 22 VSLNDFKGKYVLVDFWFAGCSW-CRKETPYLLKTYNAFKDKGFTIYGVSTDRR--EEDWK 78
Query: 135 NSLKKDNS------LKKDNRLDKLKIPLLSDLTHEISRD 167
++++D S L+KD+ D L+ + H I D
Sbjct: 79 KAIEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHIILVD 117
>pdb|2B8A|A Chain A, High Resolution Structure Of The Hdgf Pwwp Domain
Length = 110
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 56 MKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHK 114
MK P+W A +D + E + KY VFFF + F+ P ++ E ++F K
Sbjct: 20 MKGYPHW--PARID-EMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGK 75
>pdb|1RI0|A Chain A, Nmr Structure Of The N-Terminal Hath Domain Of Human Hdgf
Length = 110
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 56 MKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHK 114
MK P+W A +D + E + KY VFFF + F+ P ++ E ++F K
Sbjct: 30 MKGYPHW--PARID-EMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGK 85
>pdb|2NLU|A Chain A, Domain-Swapped Dimer Of The Pwwp Module Of Human Hepatoma-
Derived Growth Factor
pdb|2NLU|B Chain B, Domain-Swapped Dimer Of The Pwwp Module Of Human Hepatoma-
Derived Growth Factor
Length = 100
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 56 MKPAPYWKGTAVVDGNIKEIKLTDYRGKYLVFFFYPLDFTFVCPTEVLALNEKIDEFHK 114
MK P+W A +D + E + KY VFFF + F+ P ++ E ++F K
Sbjct: 20 MKGYPHW--PARID-EMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGK 75
>pdb|1NM3|A Chain A, Crystal Structure Of Heamophilus Influenza Hybrid-prx5
pdb|1NM3|B Chain B, Crystal Structure Of Heamophilus Influenza Hybrid-prx5
Length = 241
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 80 YRGKYLVFFFYPLDFTFVCPTEVLA-LNEKIDEFHKIGAE-VVGVSVDSHFTHRAWINSL 137
+ K ++ F P FT C + L NE F K G + ++ VSV+ F AW
Sbjct: 31 FDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVXNAWKEDE 90
Query: 138 KKDN 141
K +N
Sbjct: 91 KSEN 94
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,498,715
Number of Sequences: 62578
Number of extensions: 310892
Number of successful extensions: 676
Number of sequences better than 100.0: 74
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 544
Number of HSP's gapped (non-prelim): 76
length of query: 247
length of database: 14,973,337
effective HSP length: 96
effective length of query: 151
effective length of database: 8,965,849
effective search space: 1353843199
effective search space used: 1353843199
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)