RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15460
         (123 letters)



>d1ewka_ c.93.1.1 (A:) Metabotropic glutamate receptor subtype 1
           {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 477

 Score = 63.8 bits (154), Expect = 1e-13
 Identities = 36/84 (42%), Positives = 53/84 (63%)

Query: 23  VIVFGSDQEVAGMMRAVRRMNATGNFSWVGSDGWSARGLVSDGSEAEVEGTLSLQPQANP 82
           V+ F     V G++ A+RR+   G FS +GSDGW+ R  V +G E E  G ++++ Q+  
Sbjct: 252 VVCFCEGMTVRGLLSAMRRLGVVGEFSLIGSDGWADRDEVIEGYEVEANGGITIKLQSPE 311

Query: 83  VRGFDEYFLNLTVENNRRDPWFIE 106
           VR FD+YFL L ++ N R+PWF E
Sbjct: 312 VRSFDDYFLKLRLDTNTRNPWFPE 335


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.136    0.410 

Gapped
Lambda     K      H
   0.267   0.0649    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 459,339
Number of extensions: 18527
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 30
Number of HSP's successfully gapped: 3
Length of query: 123
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 48
Effective length of database: 1,377,846
Effective search space: 66136608
Effective search space used: 66136608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.1 bits)