BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15468
(653 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86U86|PB1_HUMAN Protein polybromo-1 OS=Homo sapiens GN=PBRM1 PE=1 SV=1
Length = 1689
Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 216/653 (33%), Positives = 319/653 (48%), Gaps = 152/653 (23%)
Query: 60 MG-KRRRASSLTRSVDDDDDSSSHTSETPTMQTRPKRKK--------IDPSDAMQQIYDV 110
MG KRRRA+S + SV D D H+ TP P RK+ +DP ++Y+
Sbjct: 1 MGSKRRRATSPSSSVSGDFDDGHHSVSTPG----PSRKRRRLSNLPTVDPIAVCHELYNT 56
Query: 111 IRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADI 170
IR++K E G LLC+ FIR PK+R +P Y+EVV+ P
Sbjct: 57 IRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQP------------------------- 91
Query: 171 ELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMEL 230
ID +KIQQKLK +EYDD++ AD +LL NAK++YK +S E++ A +L +L
Sbjct: 92 --------IDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDL 143
Query: 231 FHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTD 290
+ TRN+ + + + TE S + + + E L A++ +T+
Sbjct: 144 YLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPAYL-----KEILEQLLEAIVVATN 198
Query: 291 ADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKN 350
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KN
Sbjct: 199 PSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKN 258
Query: 351 ACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKF--------TPAG-------------- 388
A T+NEPGSQ++KDA ++KK+ KK EIE + TP+
Sbjct: 259 AKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKG 318
Query: 389 --------KSERIRSKRIRGGQSLSAITAAL----ESEDD-----------ESEDDEEID 425
S+ R+KR G LSAIT AL ESE+D ESE +
Sbjct: 319 SLGEERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITS 378
Query: 426 QEDPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQKMRILYNTIKETCEPKTGRQLSHI 485
D ++P +Q+YD +R +C G+ ++
Sbjct: 379 FMDVSNPFYQLYDTVR-------------------------------SCRNNQGQLIAEP 407
Query: 486 FQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDS 545
F LPS+ YPDYY+ I+ P+ ++ I +KL+ +YE LD + D MF+NA +YN P+S
Sbjct: 408 FYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNS 467
Query: 546 HIYKDALSLQRIVLQTKMHLR-----EDEDSVPDVPAAVQELLTSLFTSVYNHQKQCLGS 600
IYK L LQ+++ K L ED DS+ + +A + ++ S N +KQ
Sbjct: 468 AIYKRVLKLQQVMQAKKKELARRDDIEDGDSM--ISSATSDTGSAKRKSKKNIRKQ---- 521
Query: 601 FHVLNVDNKPLKRRLYTLCKCLMDYRD-QDGRQPMLMFMELPSAKIYPEYYKV 652
R+ L +++ R+ GR+ +FM PS K YP+YYK+
Sbjct: 522 -------------RMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKI 561
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 161/501 (32%), Positives = 253/501 (50%), Gaps = 91/501 (18%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ Q+YD +R+ + G L+ +PF +P K++ P Y++ + PI +QQ
Sbjct: 380 MDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPIS---LQQ---- 432
Query: 158 DEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRN 217
I+ KLK EY+ L + D+ L+ +NAK + N
Sbjct: 433 --------------------------IRTKLKNQEYETLDHLECDLNLMFENAKRYNVPN 466
Query: 218 SQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE--Q 275
S ++ +L ++ + + +L E D M++S T D+ + ++ +
Sbjct: 467 SAIYKRVLKLQQVMQAKKKELARRDDIEDG------DSMISSATSDTGSAKRKSKKNIRK 520
Query: 276 NQCEDLFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKY 334
+ + LFN V+ + + S R L ++F + PSKK YP+YY +I P+DL+ I I++ KY
Sbjct: 521 QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKY 580
Query: 335 ASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIR 394
A M +D+ LM +NA +NE GSQ+Y DA L+KL++ K+ E+
Sbjct: 581 AGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKEL--------------- 625
Query: 395 SKRIRGGQSLSAITAALESEDDESEDDEEIDQEDPNSPLWQVYDAIRNAKTQGVIFFFFG 454
L +DD + ++ ++ SP Y
Sbjct: 626 --------------GPLPDDDDMASPKLKLSRKSGISPKKSKY----------------- 654
Query: 455 VTAASLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASK 514
QK+ +Y +K + K GR+LS IF RLPSR + PDYY I+KP+DME I S
Sbjct: 655 -MTPMQQKLNEVYEAVKNYTD-KRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSH 712
Query: 515 LRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VP 573
+ N+Y+ +D MV DF+ MF+NAC YNEP+S IYKDAL L +++L+T+ L DEDS VP
Sbjct: 713 MMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVP 772
Query: 574 DVPAAVQELLTSLFTSVYNHQ 594
+V +QEL+ +LF SV +HQ
Sbjct: 773 NVTLLIQELIHNLFVSVMSHQ 793
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 154/609 (25%), Positives = 262/609 (43%), Gaps = 155/609 (25%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
+ ++Q+ + I G L+ + F ++P K Q P Y+ ++ PID LKT
Sbjct: 184 EILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPID-------LKT---- 232
Query: 162 DLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEH 221
I Q+++ Y + DI+LL KNAKT+ + SQ
Sbjct: 233 ----------------------IAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVF 270
Query: 222 RDAQELMELFHSTRN-----------------------KLLNPQSHEGT----------- 247
+DA + ++F+ + +L P +G+
Sbjct: 271 KDANSIKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKY 330
Query: 248 -SQKRS----------MDFMMASETED-------------SRDSSICT-EDEQNQCEDLF 282
KR+ M SE+E+ S SI + D N L+
Sbjct: 331 YRNKRAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLY 390
Query: 283 NAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEK 342
+ V + + + + E F LPSKK+YP+YY I +PI L+ I ++++ +Y +L +E
Sbjct: 391 DTVRSCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLEC 450
Query: 343 DLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQ 402
DL LM +NA +N P S IYK L++++Q KK E+ R I G
Sbjct: 451 DLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKEL-------------ARRDDIEDGD 497
Query: 403 SL-SAITAALESEDDESEDDEEIDQEDPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQ 461
S+ S+ T+ S +S+ + IR Q
Sbjct: 498 SMISSATSDTGSAKRKSKKN------------------IRK------------------Q 521
Query: 462 KMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYE 521
+M+IL+N + E EP +GR+L +F PS+ DYPDYY++I +P+D+++I +R ++Y
Sbjct: 522 RMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYA 581
Query: 522 HLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQE 581
+ M+ D MF NA YNE S +Y DA L++++ + + L D D A +
Sbjct: 582 GEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPD---DDDMASPK 638
Query: 582 LLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELP 641
L S + + + + + P++++L + + + +Y D+ GR+ +F+ LP
Sbjct: 639 LKLSRKSGISPKKSKYM----------TPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLP 688
Query: 642 SAKIYPEYY 650
S P+YY
Sbjct: 689 SRSELPDYY 697
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 142/313 (45%), Gaps = 49/313 (15%)
Query: 75 DDDDSSSHTSETPTMQTRPKRKKIDPSDAMQQIYDVIRNFKKE-DGALLCDPFIRIPKKR 133
+D DS ++ + T + K KK M+ +++V+ ++ G LCD F+ P K+
Sbjct: 494 EDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKK 553
Query: 134 QEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEY 193
P Y++++ P+D +KI I+ ++ D+Y
Sbjct: 554 DYPDYYKIILEPMD-LKI--------------------------------IEHNIRNDKY 580
Query: 194 DDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSM 253
D++L+ +NA+ + + SQ + DA L +L R K L P +
Sbjct: 581 AGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKR-KELGPLPDD-------- 631
Query: 254 DFMMASETEDSRDSSICTEDE------QNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKK 307
D M + + + SR S I + Q + +++ AV TD R L +F LPS+
Sbjct: 632 DDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRS 691
Query: 308 RYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKA 367
P+YY I P+D+ I + KY + M +D ++M NACT+NEP S IYKDA
Sbjct: 692 ELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALV 751
Query: 368 LKKLVQTKKMEIE 380
L K++ + ++E
Sbjct: 752 LHKVLLETRRDLE 764
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 123/301 (40%), Gaps = 62/301 (20%)
Query: 74 DDDDDSSSHTSETPTMQTRPKRKK-IDP-SDAMQQIYDVIRNFKKEDGALLCDPFIRIPK 131
DDDD +S + PK+ K + P + ++Y+ ++N+ + G L F+R+P
Sbjct: 630 DDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPS 689
Query: 132 KRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTD 191
+ + P Y+ + P+D KI+ + ++Y D+ +E DF+
Sbjct: 690 RSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSM---VE--------DFV--------- 729
Query: 192 EYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKR 251
++ NA T+ + S ++DA L ++ TR L EG
Sbjct: 730 -------------MMFNNACTYNEPESLIYKDALVLHKVLLETRRDL------EG----- 765
Query: 252 SMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPS-KKRYP 310
EDS ++ T Q +LF +VM+ D + R + +P+ +P
Sbjct: 766 ---------DEDSHVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFP 815
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKK 370
P+ I + +++ +Y L ++ + + + A N S+IY+DA L++
Sbjct: 816 N-----KPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQ 870
Query: 371 L 371
Sbjct: 871 F 871
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++I + N+Y LD ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 817 KPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIR 876
>sp|Q90941|PB1_CHICK Protein polybromo-1 OS=Gallus gallus GN=PBRM1 PE=1 SV=1
Length = 1633
Score = 302 bits (774), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 221/651 (33%), Positives = 324/651 (49%), Gaps = 150/651 (23%)
Query: 60 MG-KRRRASSLTRSVDDDDDSSSHTSETPTMQTRPKRK-----KIDPSDAMQQIYDVIRN 113
MG KRRRA+S + SV D H S +R +R+ +DP ++Y+ IR+
Sbjct: 1 MGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRD 60
Query: 114 FKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
+K E G LLC+ FIR PK+R +P Y+EVV+ P
Sbjct: 61 YKDEQGRLLCELFIRAPKRRNQPDYYEVVSQP---------------------------- 92
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
ID +KIQQKLK +EYDD++ AD +LL NAK +YK +S E++ A +L EL+
Sbjct: 93 -----IDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLR 147
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
T+N+ + +G +++ D E S + + E L AV +T+
Sbjct: 148 TKNEFV----QKGDAEEEDEDEEGHDSQELSSPGYL-----KEILEQLLEAVAVATNPSG 198
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KNA T
Sbjct: 199 RLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKT 258
Query: 354 FNEPGSQIYKDAKALKKLVQTKKMEIEQGKF--------TPA-------------GKS-- 390
+NEPGSQ++KDA A+KK+ KK EIE + TP+ GK
Sbjct: 259 YNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRLRTPSNLTASKLTGPSSQGKGSV 318
Query: 391 --ER------IRSKRIRGGQSLSAITAAL----ESEDD-----------ESEDDEEIDQE 427
ER R+KR G LSAIT AL ES++D ESE +
Sbjct: 319 GDERNSSNKYFRNKRSAQGDRLSAITMALQYGSESDEDAALAAAARYEGESEAESITSFM 378
Query: 428 DPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQKMRILYNTIKETCEPKTGRQLSHIFQ 487
D ++PL+Q+YD +R +C G+ +S F
Sbjct: 379 DTSNPLYQLYDTVR-------------------------------SCRNNQGQLISEPFF 407
Query: 488 RLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHI 547
+LPS+ YPDYY+ I+ P+ ++ I +KL+ ++YE LD++ AD MF+NA +YN P+S I
Sbjct: 408 QLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAI 467
Query: 548 YKDALSLQRIVLQTKMHLR-----EDEDSVPDVPAAVQELLTSLFTSVYNHQKQCLGSFH 602
YK L +Q+++ K L ED DS+ + +A + +S S N +KQ
Sbjct: 468 YKRVLKMQQVMQAKKKELARRDDIEDGDSM--ISSATSDTGSSKRKSKKNMRKQ------ 519
Query: 603 VLNVDNKPLKRRLYTLCKCLMDYRDQD-GRQPMLMFMELPSAKIYPEYYKV 652
R+ L +++ R+ GR+ +FM PS K YP+YYK+
Sbjct: 520 -----------RMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKI 559
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 160/501 (31%), Positives = 257/501 (51%), Gaps = 91/501 (18%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ + Q+YD +R+ + G L+ +PF ++P K++ P Y+ Q++KT
Sbjct: 378 MDTSNPLYQLYDTVRSCRNNQGQLISEPFFQLPSKKKYPDYY-------------QQIKT 424
Query: 158 DEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRN 217
PI +I+ KLK EY+ L +AD+ L+ +NAK + N
Sbjct: 425 --------------------PISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPN 464
Query: 218 SQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE--Q 275
S ++ ++ ++ + + +L E D M++S T D+ S ++ +
Sbjct: 465 SAIYKRVLKMQQVMQAKKKELARRDDIEDG------DSMISSATSDTGSSKRKSKKNMRK 518
Query: 276 NQCEDLFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKY 334
+ + L+NAV+ + ++ + R L ++F + PSKK YP+YY +I P+DL+ I I++ KY
Sbjct: 519 QRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKY 578
Query: 335 ASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIR 394
M D+ LM +NA +NE GSQ+Y DA L+K+++ K+ E+
Sbjct: 579 VGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKEL--------------- 623
Query: 395 SKRIRGGQSLSAITAALESEDDESEDDEEIDQEDPNSPLWQVYDAIRNAKTQGVIFFFFG 454
L +DD + ++ ++ SP Y
Sbjct: 624 --------------GPLPEDDDVASPKLKLSRKSGISPKKSKY----------------- 652
Query: 455 VTAASLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASK 514
QK+ +Y +K + K GR+LS IF RLPSR + PDYY I+KPVDME I S
Sbjct: 653 -MTPMQQKLNEVYEAVKNYTD-KRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSH 710
Query: 515 LRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VP 573
+ N+Y+ +D MV DF+ MF+NAC YNEP+S IYKDAL L +++L+T+ + DEDS VP
Sbjct: 711 MMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVP 770
Query: 574 DVPAAVQELLTSLFTSVYNHQ 594
+V +QEL+ +LF SV +HQ
Sbjct: 771 NVTLLIQELIHNLFVSVMSHQ 791
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 159/613 (25%), Positives = 260/613 (42%), Gaps = 162/613 (26%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
+ ++Q+ + + G L+ + F ++P K Q P Y+ ++ PID LKT
Sbjct: 181 EILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPID-------LKT---- 229
Query: 162 DLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEH 221
I Q+++ Y + DI+LL KNAKT+ + SQ
Sbjct: 230 ----------------------IAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVF 267
Query: 222 RDAQELMELF--------HS---------------TRNKLLNPQSHEGTS---------- 248
+DA + ++F HS T +KL P S S
Sbjct: 268 KDANAIKKIFNMKKAEIEHSELAKSSLRLRTPSNLTASKLTGPSSQGKGSVGDERNSSNK 327
Query: 249 ---QKRS----------MDFMMASET--------------EDSRDSSICTEDEQNQCEDL 281
KRS M SE+ E +S D N L
Sbjct: 328 YFRNKRSAQGDRLSAITMALQYGSESDEDAALAAAARYEGESEAESITSFMDTSNPLYQL 387
Query: 282 FNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDME 341
++ V + + + + E F LPSKK+YP+YY I PI L+ I ++++ +Y +L +E
Sbjct: 388 YDTVRSCRNNQGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLE 447
Query: 342 KDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGG 401
DL LM +NA +N P S IYK +++++Q KK E+ R I G
Sbjct: 448 ADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKKKEL-------------ARRDDIEDG 494
Query: 402 QSL-SAITAALESEDDESEDDEEIDQEDPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASL 460
S+ S+ T+ S +S+ +N + Q
Sbjct: 495 DSMISSATSDTGSSKRKSK---------------------KNMRKQ-------------- 519
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+M+ILYN + E E TGR+L +F PS+ DYPDYY++I +P+D++MI +R ++Y
Sbjct: 520 -RMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKY 578
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLR---EDEDSVPDVPA 577
+ M+ D MF NA YNE S +Y DA L++I+ + + L ED+D
Sbjct: 579 VGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDDD------V 632
Query: 578 AVQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMF 637
A +L S + + + + + P++++L + + + +Y D+ GR+ +F
Sbjct: 633 ASPKLKLSRKSGISPKKSKYM----------TPMQQKLNEVYEAVKNYTDKRGRRLSAIF 682
Query: 638 MELPSAKIYPEYY 650
+ LPS P+YY
Sbjct: 683 LRLPSRSELPDYY 695
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 141/313 (45%), Gaps = 49/313 (15%)
Query: 75 DDDDSSSHTSETPTMQTRPKRKKIDPSDAMQQIYDVIRNFKKED-GALLCDPFIRIPKKR 133
+D DS ++ + T ++ K KK M+ +Y+ + ++ G LCD F+ P K+
Sbjct: 492 EDGDSMISSATSDTGSSKRKSKKNMRKQRMKILYNAVLEARESGTGRRLCDLFMVKPSKK 551
Query: 134 QEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEY 193
P Y++++ P+D LK I+ ++ D+Y
Sbjct: 552 DYPDYYKIILEPMD-------LKM--------------------------IEHNIRNDKY 578
Query: 194 DDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSM 253
D++L+ +NA+ + + SQ + DA L ++ R K L P +
Sbjct: 579 VGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKR-KELGPLPED-------- 629
Query: 254 DFMMASETEDSRDSSICTEDE------QNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKK 307
D + + + + SR S I + Q + +++ AV TD R L +F LPS+
Sbjct: 630 DDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRS 689
Query: 308 RYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKA 367
P+YY I P+D+ I + KY + M +D ++M NACT+NEP S IYKDA
Sbjct: 690 ELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALV 749
Query: 368 LKKLVQTKKMEIE 380
L K++ + EIE
Sbjct: 750 LHKVLLETRREIE 762
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 122/301 (40%), Gaps = 62/301 (20%)
Query: 74 DDDDDSSSHTSETPTMQTRPKRKK-IDP-SDAMQQIYDVIRNFKKEDGALLCDPFIRIPK 131
+DDD +S + PK+ K + P + ++Y+ ++N+ + G L F+R+P
Sbjct: 628 EDDDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPS 687
Query: 132 KRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTD 191
+ + P Y+ + + P+D KI+ + +
Sbjct: 688 RSELPDYY---------------------------------ITIKKPVDMEKIRSHMMAN 714
Query: 192 EYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKR 251
+Y D+ D ++ NA T+ + S ++DA L ++ TR ++ EG
Sbjct: 715 KYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREI------EGD---- 764
Query: 252 SMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPS-KKRYP 310
EDS ++ T Q +LF +VM+ D + R + +P+ +P
Sbjct: 765 ----------EDSHVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFP 813
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKK 370
P+ I + +++ +Y L ++++ + + A N S+IY+DA L++
Sbjct: 814 N-----KPPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQ 868
Query: 371 L 371
Sbjct: 869 F 869
Score = 36.6 bits (83), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++I + N+Y LD + ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 815 KPPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIR 874
>sp|Q8BSQ9|PB1_MOUSE Protein polybromo-1 OS=Mus musculus GN=Pbrm1 PE=1 SV=4
Length = 1634
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 207/632 (32%), Positives = 317/632 (50%), Gaps = 110/632 (17%)
Query: 60 MG-KRRRASSLTRSVDDDDDSSSHTSETPTMQTRPKRKK--------IDPSDAMQQIYDV 110
MG KRRRA+S + SV D D H+ TP P RK+ +DP ++Y+
Sbjct: 1 MGSKRRRATSPSSSVSGDFDDGHHSVPTPG----PSRKRRRLSNLPTVDPIAVCHELYNT 56
Query: 111 IRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADI 170
IR++K E G LLC+ FIR PK+R +P Y+EVV+ P
Sbjct: 57 IRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQP------------------------- 91
Query: 171 ELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMEL 230
ID +KIQQKLK +EYDD++ AD +LL NAK +YK +S E++ A +L +L
Sbjct: 92 --------IDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDL 143
Query: 231 FHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTD 290
+ TRN+ + + + + S + + E L A++ +T+
Sbjct: 144 YLRTRNEFVQKGEADDEDDDEDGQDNQGTLADGSSPGYL-----KEILEQLLEAIVVATN 198
Query: 291 ADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKN 350
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KN
Sbjct: 199 PSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKN 258
Query: 351 ACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAA 410
A T+NEPGSQ++KDA ++KK+ KK EIE + T + S RIR +L+A
Sbjct: 259 AKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMTKS-------SLRIRTASNLAAARLT 311
Query: 411 LESEDDESEDDEEIDQEDPNSPLWQVYDAIRNAKTQGVIFFF-FGVTA---ASLQKMRI- 465
S + S +E +P S ++ A++ + + +G + A+L R
Sbjct: 312 GPSHNKSSLGEE----RNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAALAAARYE 367
Query: 466 ---------------------LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRK 504
LY+T++ +C G+ ++ F LPS+ YPDYY+ I+
Sbjct: 368 EGESEAESITSFMDVSNPFHQLYDTVR-SCRNHQGQLIAEPFFHLPSKKKYPDYYQQIKM 426
Query: 505 PVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMH 564
P+ ++ I +KL+ +YE LD + D MF+NA +YN P+S IYK L LQ+++ K
Sbjct: 427 PISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKE 486
Query: 565 L--RED-EDSVPDVPAAVQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKC 621
L R+D ED + +A + ++ S N +KQ R+ L
Sbjct: 487 LARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQ-----------------RMKILFNV 529
Query: 622 LMDYRD-QDGRQPMLMFMELPSAKIYPEYYKV 652
+++ R+ GR+ +FM PS K YP+YYK+
Sbjct: 530 VLEAREPGSGRRLCDLFMVKPSKKDYPDYYKI 561
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/501 (32%), Positives = 253/501 (50%), Gaps = 91/501 (18%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ Q+YD +R+ + G L+ +PF +P K++ P Y++ + PI +QQ
Sbjct: 380 MDVSNPFHQLYDTVRSCRNHQGQLIAEPFFHLPSKKKYPDYYQQIKMPIS---LQQ---- 432
Query: 158 DEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRN 217
I+ KLK EY+ L + D+ L+ +NAK + N
Sbjct: 433 --------------------------IRTKLKNQEYETLDHLECDLNLMFENAKRYNVPN 466
Query: 218 SQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE--Q 275
S ++ +L ++ + + +L E D M++S T D+ + ++ +
Sbjct: 467 SAIYKRVLKLQQVMQAKKKELARRDDIEDG------DSMISSATSDTGSAKRKSKKNIRK 520
Query: 276 NQCEDLFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKY 334
+ + LFN V+ + + S R L ++F + PSKK YP+YY +I P+DL+ I I++ KY
Sbjct: 521 QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKY 580
Query: 335 ASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIR 394
A M +D+ LM +NA +NE GSQ+Y DA L+KL++ K+ E+
Sbjct: 581 AGEEGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKEL--------------- 625
Query: 395 SKRIRGGQSLSAITAALESEDDESEDDEEIDQEDPNSPLWQVYDAIRNAKTQGVIFFFFG 454
L +DD + ++ ++ SP Y
Sbjct: 626 --------------GPLPDDDDMASPKLKLSRKSGVSPKKSKY----------------- 654
Query: 455 VTAASLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASK 514
QK+ +Y +K + K GR+LS IF RLPSR + PDYY I+KP+DME I S
Sbjct: 655 -MTPMQQKLNEVYEAVKNYTD-KRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSH 712
Query: 515 LRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VP 573
+ N+Y+ +D MV DF+ MF+NAC YNEP+S IYKDAL L +++L+T+ L DEDS VP
Sbjct: 713 MMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVP 772
Query: 574 DVPAAVQELLTSLFTSVYNHQ 594
+V +QEL+ +LF SV +HQ
Sbjct: 773 NVTLLIQELIHNLFVSVMSHQ 793
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 156/607 (25%), Positives = 261/607 (42%), Gaps = 155/607 (25%)
Query: 104 MQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDL 163
++Q+ + I G L+ + F ++P K Q P Y+ ++ PID LKT
Sbjct: 186 LEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPID-------LKT------ 232
Query: 164 SDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRD 223
I Q+++ Y + DI+LL KNAKT+ + SQ +D
Sbjct: 233 --------------------IAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKD 272
Query: 224 AQELMELFHSTRNKL----------------------LNPQSHEGTS------------- 248
A + ++F+ + ++ L SH +S
Sbjct: 273 ANSIKKIFYMKKAEIEHHEMTKSSLRIRTASNLAAARLTGPSHNKSSLGEERNPTSKYYR 332
Query: 249 QKR----------SMDFMMASETED-------------SRDSSICT-EDEQNQCEDLFNA 284
KR +M SE+E+ S SI + D N L++
Sbjct: 333 NKRAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFHQLYDT 392
Query: 285 VMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDL 344
V + + + + E F LPSKK+YP+YY I +PI L+ I ++++ +Y +L +E DL
Sbjct: 393 VRSCRNHQGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDL 452
Query: 345 ILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSL 404
LM +NA +N P S IYK L++++Q KK E+ R I G S+
Sbjct: 453 NLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKEL-------------ARRDDIEDGDSM 499
Query: 405 -SAITAALESEDDESEDDEEIDQEDPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQKM 463
S+ T+ S +S+ + IR Q+M
Sbjct: 500 ISSATSDTGSAKRKSKKN------------------IRK------------------QRM 523
Query: 464 RILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHL 523
+IL+N + E EP +GR+L +F PS+ DYPDYY++I +P+D+++I +R ++Y
Sbjct: 524 KILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGE 583
Query: 524 DEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQELL 583
+ M+ D MF NA YNE S +Y DA L++++ + L D D A +L
Sbjct: 584 EGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELGPLPD---DDDMASPKLK 640
Query: 584 TSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSA 643
S + V + + + P++++L + + + +Y D+ GR+ +F+ LPS
Sbjct: 641 LSRKSGVSPKKSKYM----------TPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSR 690
Query: 644 KIYPEYY 650
P+YY
Sbjct: 691 SELPDYY 697
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 163/369 (44%), Gaps = 58/369 (15%)
Query: 75 DDDDSSSHTSETPTMQTRPKRKKIDPSDAMQQIYDVIRNFKKE-DGALLCDPFIRIPKKR 133
+D DS ++ + T + K KK M+ +++V+ ++ G LCD F+ P K+
Sbjct: 494 EDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKK 553
Query: 134 QEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEY 193
P Y++++ P+D +KI I+ ++ D+Y
Sbjct: 554 DYPDYYKIILEPMD-LKI--------------------------------IEHNIRNDKY 580
Query: 194 DDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSM 253
D++L+ +NA+ + + SQ + DA L +L R K L P +
Sbjct: 581 AGEEGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKR-KELGPLPDD-------- 631
Query: 254 DFMMASETEDSRDSSICTEDE------QNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKK 307
D M + + + SR S + + Q + +++ AV TD R L +F LPS+
Sbjct: 632 DDMASPKLKLSRKSGVSPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRS 691
Query: 308 RYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKA 367
P+YY I P+D+ I + KY + M +D ++M NACT+NEP S IYKDA
Sbjct: 692 ELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALV 751
Query: 368 LKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAALESEDDE----SEDDEE 423
L K++ + ++E + + + + I + + + +DDE S+ E
Sbjct: 752 LHKVLLETRRDLEGDEDSHVPNVTLLIQELIH-----NLFVSVMSHQDDEGRCYSDSLAE 806
Query: 424 IDQEDPNSP 432
I DPNSP
Sbjct: 807 IPAVDPNSP 815
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 120/304 (39%), Gaps = 68/304 (22%)
Query: 74 DDDDDSSSHTSETPTMQTRPKRKK-IDP-SDAMQQIYDVIRNFKKEDGALLCDPFIRIPK 131
DDDD +S + PK+ K + P + ++Y+ ++N+ + G L F+R+P
Sbjct: 630 DDDDMASPKLKLSRKSGVSPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPS 689
Query: 132 KRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTD 191
+ + P Y+ L + P+D KI+ + +
Sbjct: 690 RSELPDYY---------------------------------LTIKKPMDMEKIRSHMMAN 716
Query: 192 EYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKR 251
+Y D+ D ++ NA T+ + S ++DA L ++ TR L EG
Sbjct: 717 KYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDL------EGD---- 766
Query: 252 SMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSR----PLHEVFQLLPSKK 307
EDS ++ T Q +LF +VM+ D + R L E+ + P+
Sbjct: 767 ----------EDSHVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNSP 815
Query: 308 RYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKA 367
P P+ I + ++ +Y L ++ + + + A N S+IY+DA
Sbjct: 816 NKP--------PLTFDIIRKNVESNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVE 867
Query: 368 LKKL 371
L++
Sbjct: 868 LQQF 871
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++I + N+Y LD ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 817 KPPLTFDIIRKNVESNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIRIR 876
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 68/103 (66%)
Query: 277 QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
Q + + V+ D+ R L EVF LPS+K PEYY++I P+D + I RI++ KY S
Sbjct: 1391 QMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRS 1450
Query: 337 LGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
LGD+EKD++L+ NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 1451 LGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1493
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%)
Query: 478 TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
+GRQLS +F +LPSR D P+YYE+IRKPVD + I ++R ++Y L ++ D + + NA
Sbjct: 1406 SGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNA 1465
Query: 538 CKYNEPDSHIYKDALSLQRI 557
+N S IY+D++ LQ +
Sbjct: 1466 QTFNLEGSQIYEDSIVLQSV 1485
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 38/152 (25%)
Query: 92 RPKRKKIDP-----SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPI 146
RP +K+ P + M I D + N+K G L + FI++P ++ P Y+E++ P+
Sbjct: 1375 RPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPV 1434
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 206
DF KI+++++ +Y L D + D+ LL
Sbjct: 1435 DFKKIKERIRNHKYRSLGD---------------------------------LEKDVMLL 1461
Query: 207 VKNAKTFYKRNSQEHRDAQELMELFHSTRNKL 238
NA+TF SQ + D+ L +F S R K+
Sbjct: 1462 CHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1493
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 611 LKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKV 652
L +++ + +++Y+D GRQ +F++LPS K PEYY++
Sbjct: 1388 LTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYEL 1429
>sp|Q09948|RSC4_SCHPO Chromatin structure-remodeling complex subunit rsc4
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rsc4 PE=1 SV=1
Length = 542
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 123/261 (47%), Gaps = 41/261 (15%)
Query: 106 QIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSD 165
++ + + K +G D F +P KR P Y++++ QK
Sbjct: 17 EVLEALVGLKDNEGNPFDDIFEELPSKRYFPDYYQII----------QK----------- 55
Query: 166 FQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQ 225
PI + ++ K KT +Y + DF DI L+V NA+T+ S +
Sbjct: 56 ------------PICYKMMRNKAKTGKYLSMGDFYDDIRLMVSNAQTYNMPGSLVY---- 99
Query: 226 ELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAV 285
E L +T N L +S +GT + + M +S E+ + + D +++ +A+
Sbjct: 100 ECSVLIANTANSL---ESKDGTLNEEENEEMESSINEEHKPGT-NEIDVPKVIQNILDAL 155
Query: 286 MTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
D R L ++F LPSK+ YP+YY++I P+ ++ + +R + G+Y +L KDL
Sbjct: 156 HEEKDEQGRFLIDIFIDLPSKRLYPDYYEIIKSPMTIKMLEKRFKKGEYTTLESFVKDLN 215
Query: 346 LMTKNACTFNEPGSQIYKDAK 366
M NA T+N PGS +Y+DA+
Sbjct: 216 QMFINAKTYNAPGSFVYEDAE 236
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 479 GRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNAC 538
GR L IF LPS+ YPDYYE+I+ P+ ++M+ + + +Y L+ V D QMF NA
Sbjct: 163 GRFLIDIFIDLPSKRLYPDYYEIIKSPMTIKMLEKRFKKGEYTTLESFVKDLNQMFINAK 222
Query: 539 KYNEPDSHIYKDA 551
YN P S +Y+DA
Sbjct: 223 TYNAPGSFVYEDA 235
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%)
Query: 274 EQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGK 333
++ + +++ A++ D + P ++F+ LPSK+ +P+YY +I PI + + + + GK
Sbjct: 11 DKTKFDEVLEALVGLKDNEGNPFDDIFEELPSKRYFPDYYQIIQKPICYKMMRNKAKTGK 70
Query: 334 YASLGDMEKDLILMTKNACTFNEPGSQIYK 363
Y S+GD D+ LM NA T+N PGS +Y+
Sbjct: 71 YLSMGDFYDDIRLMVSNAQTYNMPGSLVYE 100
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 479 GRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNAC 538
G IF+ LPS+ +PDYY++I+KP+ +M+ +K + +Y + + D M NA
Sbjct: 30 GNPFDDIFEELPSKRYFPDYYQIIQKPICYKMMRNKAKTGKYLSMGDFYDDIRLMVSNAQ 89
Query: 539 KYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQELLTSLFTSVYNHQKQCL 598
YN P S +Y+ + +++ + E +D +L + +
Sbjct: 90 TYNMPGSLVYECS-----VLIANTANSLESKDG-------------TLNEEENEEMESSI 131
Query: 599 GSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKV 652
H + + + + + L + +D+ GR + +F++LPS ++YP+YY++
Sbjct: 132 NEEHKPGTNEIDVPKVIQNILDALHEEKDEQGRFLIDIFIDLPSKRLYPDYYEI 185
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 92 RPKRKKIDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKI 151
+P +ID +Q I D + K E G L D FI +P KR P Y+E++ +P+ +
Sbjct: 136 KPGTNEIDVPKVIQNILDALHEEKDEQGRFLIDIFIDLPSKRLYPDYYEIIKSPMTIKML 195
Query: 152 QQKLKTDEYDDLSDFQADIELLVV 175
+++ K EY L F D+ + +
Sbjct: 196 EKRFKKGEYTTLESFVKDLNQMFI 219
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 70/105 (66%)
Query: 277 QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
+ + + +AV+ D+ R L EVF LPS+K PEYY++I P+D + I RI++ KY S
Sbjct: 1428 KMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRS 1487
Query: 337 LGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
L D+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+
Sbjct: 1488 LNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEK 1532
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 478 TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
+GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y L+++ D + + NA
Sbjct: 1443 SGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNA 1502
Query: 538 CKYNEPDSHIYKDALSLQRI 557
+N S IY+D++ LQ +
Sbjct: 1503 QTFNLEGSLIYEDSIVLQSV 1522
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 92 RPKRKKIDP-----SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPI 146
RP +K+ P + M++I D + +K G L + FI++P +++ P Y+E++ P+
Sbjct: 1412 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPV 1471
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELL 173
DF KI+++++ +Y L+D + D+ LL
Sbjct: 1472 DFKKIKERIRNHKYRSLNDLEKDVMLL 1498
Score = 36.6 bits (83), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 611 LKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKV 652
L +++ + ++ Y+D GRQ +F++LPS K PEYY++
Sbjct: 1425 LTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYEL 1466
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 70/105 (66%)
Query: 277 QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
+ + + +AV+ D+ R L EVF LPS+K PEYY++I P+D + I RI++ KY S
Sbjct: 1428 KMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRS 1487
Query: 337 LGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
L D+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+
Sbjct: 1488 LNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEK 1532
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 478 TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
+GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y L+++ D + + NA
Sbjct: 1443 SGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNA 1502
Query: 538 CKYNEPDSHIYKDALSLQRI 557
+N S IY+D++ LQ +
Sbjct: 1503 QTFNLEGSLIYEDSIVLQSV 1522
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 92 RPKRKKIDP-----SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPI 146
RP +K+ P + M++I D + +K G L + FI++P +++ P Y+E++ P+
Sbjct: 1412 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPV 1471
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELL 173
DF KI+++++ +Y L+D + D+ LL
Sbjct: 1472 DFKKIKERIRNHKYRSLNDLEKDVMLL 1498
Score = 36.6 bits (83), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 611 LKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKV 652
L +++ + ++ Y+D GRQ +F++LPS K PEYY++
Sbjct: 1425 LTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYEL 1466
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 63/90 (70%)
Query: 290 DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
++ R L EVF LPS+K PEYY++I P+D + I RI++ KY SLGD+EKD++L+
Sbjct: 1417 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1476
Query: 350 NACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 1477 NAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1506
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%)
Query: 478 TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
+GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y L ++ D + + NA
Sbjct: 1419 SGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNA 1478
Query: 538 CKYNEPDSHIYKDALSLQRI 557
+N S IY+D++ LQ +
Sbjct: 1479 QTFNLEGSQIYEDSIVLQSV 1498
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 56/187 (29%)
Query: 75 DDDDSSSHTSETPTMQTRPKRKKIDP-----SDAMQQIYDVIRNFK-------------- 115
D D + + + RP +K+ P + M I D + N+K
Sbjct: 1353 DKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPSNSQL 1412
Query: 116 ----KEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIE 171
G L + FI++P +++ P Y+E++ P+D
Sbjct: 1413 EIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVD------------------------ 1448
Query: 172 LLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELF 231
F KI+++++ +Y L D + D+ LL NA+TF SQ + D+ L +F
Sbjct: 1449 ---------FKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVF 1499
Query: 232 HSTRNKL 238
S R K+
Sbjct: 1500 KSARQKI 1506
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 281 LFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGD 339
+ +AV+ D+ S R L EVF LPS+K PEYY++I P+D + I RI++ KY SL D
Sbjct: 1465 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1524
Query: 340 MEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+
Sbjct: 1525 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEK 1566
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 64/97 (65%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1460 KKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1519
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRI 557
L+++ D + + NA +N S IY+D++ LQ +
Sbjct: 1520 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSV 1556
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 44/171 (25%)
Query: 74 DDDDDSSSHTSETPTMQTRPKRKKIDP-----SDAMQQIYDVIRNFK-KEDGALLCDPFI 127
D DD+S + RP +K+ P + M++I D + +K G L + FI
Sbjct: 1432 DKDDESKKQKK-----RGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFI 1486
Query: 128 RIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQK 187
++P +++ P Y+E++ P+D F KI+++
Sbjct: 1487 QLPSRKELPEYYELIRKPVD---------------------------------FKKIKER 1513
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKL 238
++ +Y L+D + D+ LL +NA+TF S + D+ L +F S R K+
Sbjct: 1514 IRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKI 1564
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 277 QCEDLFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYA 335
+ + + +AV+ D+ S R L EVF LPS+K PEYY++I P+D + I RI++ KY
Sbjct: 1420 KMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR 1479
Query: 336 SLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
SL D+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+
Sbjct: 1480 SLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEK 1525
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 64/97 (65%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1419 KKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1478
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRI 557
L+++ D + + NA +N S IY+D++ LQ +
Sbjct: 1479 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSV 1515
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 44/178 (24%)
Query: 67 SSLTRSVDDDDDSSSHTSETPTMQTRPKRKKIDP-----SDAMQQIYDVIRNFK-KEDGA 120
++ TRS D DD+S + RP +K+ P + M++I D + +K G
Sbjct: 1384 TTSTRSRDKDDESKKQKK-----RGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGR 1438
Query: 121 LLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPID 180
L + FI++P +++ P Y+E++ P+D
Sbjct: 1439 QLSEVFIQLPSRKELPEYYELIRKPVD--------------------------------- 1465
Query: 181 FIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKL 238
F KI+++++ +Y L+D + D+ LL +NA+TF S + D+ L +F S R K+
Sbjct: 1466 FKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKI 1523
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%)
Query: 278 CEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASL 337
C +++ AV D + RPL+++F LPSKK YP+YY +I PI L I + I Y +L
Sbjct: 1070 CLEIYKAVNELEDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTL 1129
Query: 338 GDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M+ DL+ M NA T+NE GS +Y+DA ++ ++TK E+E+
Sbjct: 1130 EAMKSDLMTMFNNARTYNEEGSFVYEDANKMQTAMETKIEELEE 1173
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
+Y + E E GR L+ +F LPS+ YPDYY +I+ P+ ++ I + Y+ L+
Sbjct: 1073 IYKAVNE-LEDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEA 1131
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQELLTS 585
M +D + MF+NA YNE S +Y+DA +Q ++TK+ E++ ++ + E +
Sbjct: 1132 MKSDLMTMFNNARTYNEEGSFVYEDANKMQ-TAMETKIEELEEDGTLATLRGMEAEATSQ 1190
Query: 586 LFTSVYN 592
L + N
Sbjct: 1191 LEDRIEN 1197
Score = 37.4 bits (85), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 611 LKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKV 652
L+R + K + + D +GR +F+ELPS K+YP+YY +
Sbjct: 1066 LRRVCLEIYKAVNELEDDNGRPLNKLFLELPSKKLYPDYYMI 1107
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 85 ETP--TMQTRPKRKKIDPSDAMQ------------QIYDVIRNFKKEDGALLCDPFIRIP 130
ETP T+ +PK+K+ D + +IY + + ++G L F+ +P
Sbjct: 1037 ETPALTLNGKPKKKRGPAPDTLTSEHRSLLRRVCLEIYKAVNELEDDNGRPLNKLFLELP 1096
Query: 131 KKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADI 170
K+ P Y+ ++ +PI I++ + Y L ++D+
Sbjct: 1097 SKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEAMKSDL 1136
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 275 QNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKY 334
+ Q + +AV+ + D R L E F LPS++R P+YY++I P+D++ I +RI+D KY
Sbjct: 1427 KKQMHKIMSAVIKH-NQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKY 1485
Query: 335 ASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
A L ++EKD + + +NA +NE S IY D+ AL+K+ + I
Sbjct: 1486 ADLNELEKDFMQLCQNAQIYNEEASLIYLDSIALQKVFVGARQRI 1530
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
Q +I+ IK + GR LS F +LPSR PDYYE+I++PVD++ I ++ +Y
Sbjct: 1429 QMHKIMSAVIKHN---QDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKY 1485
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHL 565
L+E+ DF+Q+ NA YNE S IY D+++LQ++ + + +
Sbjct: 1486 ADLNELEKDFMQLCQNAQIYNEEASLIYLDSIALQKVFVGARQRI 1530
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 92 RPKRKKIDPSDAMQQIYDVIRNFKK--EDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFI 149
R +R+ +D + +Q++ ++ K +DG L +PF+++P +++ P Y+E++ P+D
Sbjct: 1416 RRRRQNLD-KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIK 1474
Query: 150 KIQQKLKTDEYDDLSDFQADI 170
KI Q+++ +Y DL++ + D
Sbjct: 1475 KILQRIEDCKYADLNELEKDF 1495
>sp|D4A7T3|BRDT_RAT Bromodomain testis-specific protein OS=Rattus norvegicus GN=Brdt
PE=1 SV=1
Length = 952
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 138/334 (41%), Gaps = 74/334 (22%)
Query: 305 SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKD 364
+K + P+YY +I+ P+DL TI +R+++ Y + D M N +N+PG I
Sbjct: 58 AKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVM 117
Query: 365 AKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAALESEDDESEDDEEI 424
A+AL+KL K ++ Q + GK ER++ + Q +A+++A E +S ++
Sbjct: 118 AQALEKLFMQKLSQMPQEEQIVGGK-ERMK----KDIQQKTAVSSAKEQTPSKSAENVFK 172
Query: 425 DQEDPN-------SPLWQVYDAIRNAKTQGVIFFFFGV----------------TAASLQ 461
QE P SPL +A +Q V+ GV ++ S
Sbjct: 173 RQEIPAGFPDVCLSPLNMAQEAPPTCDSQTVVQITKGVKRRADTTTPTTSSAKASSESPP 232
Query: 462 KMR--------ILYNTIKETC-----------EPKTGRQLSH---IFQRLPSRHDYP--- 496
+R + NT+K K QL H I + + ++ P
Sbjct: 233 PLREAKPANAPVKENTVKSVLPDSQQQHRVLKTVKVTEQLKHCSEILKEMLAKKHLPYAW 292
Query: 497 --------------DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNE 542
+YY++++ P+D+ I K+ +Y+ E AD MF N KYN
Sbjct: 293 PFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNCYKYNP 352
Query: 543 PDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVP 576
PD + A LQ + +MH + +PD P
Sbjct: 353 PDHEVVTMARMLQDVF---EMHFAK----IPDEP 379
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 40/174 (22%)
Query: 61 GKRRRASSLTRSVDDDDDSSSHTSETPTMQTRPKRKKIDPSDA-------------MQQI 107
G +RRA + T + S+ +SE+P P ++ P++A QQ
Sbjct: 209 GVKRRADTTTPTTS----SAKASSESP-----PPLREAKPANAPVKENTVKSVLPDSQQQ 259
Query: 108 YDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQ 167
+ V++ K + C ++ ++ Y NP+D L Y D
Sbjct: 260 HRVLKTVKVTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDV----DALGLHNYYD----- 310
Query: 168 ADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEH 221
+V NP+D I+ K+ EY D +F AD+ L+ N YK N +H
Sbjct: 311 ------IVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNC---YKYNPPDH 355
>sp|O74964|RSC1_SCHPO Chromatin structure-remodeling complex subunit rsc1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rsc1 PE=1 SV=1
Length = 803
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 119/247 (48%), Gaps = 16/247 (6%)
Query: 319 PIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL-VQTKKM 377
P L++I +I + +Y + DL + N E G+Q Y +AL++ +Q +
Sbjct: 58 PTTLKSIQSKIDEFQYHDFSEFVSDLAYLFINVKALYE-GTQTYSFVQALEEFCIQQLRT 116
Query: 378 EIEQGKF---------TPAGKSERIRSKRIRGGQSLSAITAALESEDDESEDDEEIDQED 428
+QG +P+ + S+ S + +++ED+ + D +++ED
Sbjct: 117 FQQQGYIPVITWPNTDSPSATTSSPISRNPEYSVSPPNGSKFVKNEDEAYDSDLYVEEED 176
Query: 429 PNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQKM----RILYNTIKETCEPKTGRQLSH 484
+ + K++ + ++ L + +++ ++ + +GRQL
Sbjct: 177 SDVKGRSMVGRDGRYKSEDLKRRKLQPSSKPLSSLEARAKVIMRQVRRYRD-GSGRQLFA 235
Query: 485 IFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPD 544
F+RLP +P+YY+ I +P+ +E+I KL ++YE +++ V DF MFDNA +N+P
Sbjct: 236 PFERLPDPRMFPEYYQAIEQPMALEVIQKKLSKHRYETIEQFVDDFNLMFDNAKSFNDPS 295
Query: 545 SHIYKDA 551
S +Y+DA
Sbjct: 296 SQVYRDA 302
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 108/273 (39%), Gaps = 43/273 (15%)
Query: 145 PIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIE 204
P IQ K+ +Y D S+F +D+ L FI ++ + + S QA E
Sbjct: 58 PTTLKSIQSKIDEFQYHDFSEFVSDLAYL-------FINVKALYEGTQ--TYSFVQALEE 108
Query: 205 LLVKNAKTFYKRN-----SQEHRDAQELMELFHSTRNKLLNPQSHEGTS------QKRSM 253
++ +TF ++ + + D+ +RN + G+ +
Sbjct: 109 FCIQQLRTFQQQGYIPVITWPNTDSPSATTSSPISRNPEYSVSPPNGSKFVKNEDEAYDS 168
Query: 254 DFMMASETEDSRDSSICTEDEQNQCEDL----------------------FNAVMTSTDA 291
D + E D + S+ D + + EDL V D
Sbjct: 169 DLYVEEEDSDVKGRSMVGRDGRYKSEDLKRRKLQPSSKPLSSLEARAKVIMRQVRRYRDG 228
Query: 292 DSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNA 351
R L F+ LP + +PEYY I+ P+ L I +++ +Y ++ D LM NA
Sbjct: 229 SGRQLFAPFERLPDPRMFPEYYQAIEQPMALEVIQKKLSKHRYETIEQFVDDFNLMFDNA 288
Query: 352 CTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKF 384
+FN+P SQ+Y+DA LK + + +E GK
Sbjct: 289 KSFNDPSSQVYRDADFLKNYL-ADVLRLEAGKL 320
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 94 KRKKIDPSDA--------MQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNP 145
KR+K+ PS + I +R ++ G L PF R+P R P Y++ + P
Sbjct: 197 KRRKLQPSSKPLSSLEARAKVIMRQVRRYRDGSGRQLFAPFERLPDPRMFPEYYQAIEQP 256
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELL 173
+ IQ+KL Y+ + F D L+
Sbjct: 257 MALEVIQKKLSKHRYETIEQFVDDFNLM 284
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 611 LKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKV 652
L+ R + + + YRD GRQ F LP +++PEYY+
Sbjct: 211 LEARAKVIMRQVRRYRDGSGRQLFAPFERLPDPRMFPEYYQA 252
>sp|Q58F21|BRDT_HUMAN Bromodomain testis-specific protein OS=Homo sapiens GN=BRDT PE=1
SV=4
Length = 947
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 128/314 (40%), Gaps = 67/314 (21%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K + P+YY +I P+DL TI +R+++ YA + +D M N +N+PG I A
Sbjct: 60 KLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 366 KALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAALESEDDESEDDEEID 425
+AL+KL K ++ Q + G ERI+ +G Q A+++A E + +
Sbjct: 120 QALEKLFMQKLSQMPQEEQV-VGVKERIK----KGTQQNIAVSSAKEKSSPSATEKVFKQ 174
Query: 426 QEDPN-------SPLWQVYDAIRNAKTQGVIFFFFGV-------TAAS------------ 459
QE P+ SPL V A N+ +Q GV T A+
Sbjct: 175 QEIPSVFPKTSISPLNVVQGASVNSSSQTAAQVTKGVKRKADTTTPATSAVKASSEFSPT 234
Query: 460 -------------------LQKMRILYNTIKETCEPKTGRQLSHIFQRLPSR----HDYP 496
L + YN +K + R S I + + ++ + +P
Sbjct: 235 FTEKSVALPPIKENMPKNVLPDSQQQYNVVKTVKVTEQLRHCSEILKEMLAKKHFSYAWP 294
Query: 497 -------------DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEP 543
+YY+V++ P+D+ I K+ +Y+ + AD MF N KYN P
Sbjct: 295 FYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPP 354
Query: 544 DSHIYKDALSLQRI 557
D + A LQ +
Sbjct: 355 DHEVVTMARMLQDV 368
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I+ P+D+ I +L Y E + DF MF N YN+P I A +L+
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 556 RIVLQTKMHLREDEDSV 572
++ +Q + ++E V
Sbjct: 124 KLFMQKLSQMPQEEQVV 140
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 18/117 (15%)
Query: 105 QQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLS 164
QQ Y+V++ K + C ++ ++ SY NP+D L Y D
Sbjct: 258 QQQYNVVKTVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDV----NALGLHNYYD-- 311
Query: 165 DFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEH 221
VV NP+D I++K+ EY D F AD+ L+ N YK N +H
Sbjct: 312 ---------VVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNC---YKYNPPDH 356
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 312 YYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL 371
YYDV+ P+DL TI ++ + +Y D+ LM N +N P ++ A+ L+ +
Sbjct: 309 YYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDV 368
Query: 372 VQT 374
+T
Sbjct: 369 FET 371
>sp|Q4R8Y1|BRDT_MACFA Bromodomain testis-specific protein OS=Macaca fascicularis GN=BRDT
PE=2 SV=3
Length = 947
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 127/314 (40%), Gaps = 67/314 (21%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K + P+YY +I P+DL TI +R+++ Y + +D M N +N+PG I A
Sbjct: 60 KLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 366 KALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAALESEDDESEDDEEID 425
+AL+KL K ++ Q + GK ERI+ +G Q A+ +A E + +
Sbjct: 120 QALEKLFVQKLSQMPQEEQVVGGK-ERIK----KGTQQNIAVFSAKEKSSPNATEKVFKQ 174
Query: 426 QEDPN-------SPLWQVYDAIRNAKTQGVIFFFFGVT--------AASLQKM------- 463
Q P+ SPL A N+ +Q V GV A S+ K
Sbjct: 175 QAIPSVFPKTSVSPLNVAQGASVNSSSQSVAQVTKGVKRKADTTTPATSVVKASSEFSPT 234
Query: 464 -----------------RIL------YNTIKETCEPKTGRQLSHIFQRLPSR----HDYP 496
+L YN +K + R S I + + ++ + +P
Sbjct: 235 FTEKSVTLPPIKENMPKNVLPDSQQQYNVVKSVKVTEQLRHCSEILKEMLAKKHFSYAWP 294
Query: 497 -------------DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEP 543
+YY++++ P+D+ I K+ +Y+ + AD MF N KYN P
Sbjct: 295 FYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPP 354
Query: 544 DSHIYKDALSLQRI 557
D + A LQ +
Sbjct: 355 DHEVVTMARMLQDV 368
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I+ P+D+ I +L Y E + DF MF N YN+P I A +L+
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 556 RIVLQTKMHLREDEDSV 572
++ +Q + ++E V
Sbjct: 124 KLFVQKLSQMPQEEQVV 140
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 22/165 (13%)
Query: 61 GKRRRASSLTRSVDDDDDSSSHTSE-TPTMQTRPKRKKIDPSDAM---QQIYDVIRNFKK 116
G +R+A + T + SS + T T P K+ P + + QQ Y+V+++ K
Sbjct: 210 GVKRKADTTTPATSVVKASSEFSPTFTEKSVTLPPIKENMPKNVLPDSQQQYNVVKSVKV 269
Query: 117 EDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVT 176
+ C ++ ++ SY NP+D L Y D +V
Sbjct: 270 TEQLRHCSEILKEMLAKKHFSYAWPFYNPVDV----NALGLHNYYD-----------IVK 314
Query: 177 NPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEH 221
NP+D I++K+ EY D F AD+ L+ N YK N +H
Sbjct: 315 NPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNC---YKYNPPDH 356
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 312 YYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL 371
YYD++ P+DL TI ++ + +Y D+ LM N +N P ++ A+ L+ +
Sbjct: 309 YYDIVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDV 368
Query: 372 VQT 374
+T
Sbjct: 369 FET 371
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 58/96 (60%)
Query: 278 CEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASL 337
C ++F + D R ++ +F P++K YP+YY +I PI L I R I++ +Y +
Sbjct: 1522 CMEIFERLYNLQSEDGRFVNGLFLYPPNRKLYPDYYIIIKRPIALGKIKRNIKNDRYGDV 1581
Query: 338 GDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQ 373
G++ D +LM NA T+NE S +Y+DAK ++K ++
Sbjct: 1582 GELIADFMLMFNNAYTYNEEHSIVYEDAKLMEKTLK 1617
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 53/80 (66%)
Query: 479 GRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNAC 538
GR ++ +F P+R YPDYY +I++P+ + I ++ ++Y + E++ADF+ MF+NA
Sbjct: 1537 GRFVNGLFLYPPNRKLYPDYYIIIKRPIALGKIKRNIKNDRYGDVGELIADFMLMFNNAY 1596
Query: 539 KYNEPDSHIYKDALSLQRIV 558
YNE S +Y+DA +++ +
Sbjct: 1597 TYNEEHSIVYEDAKLMEKTL 1616
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 50 CATLPPKRFIMGKRRRASSLTRSVDDDDDSS---SHTSETPTMQTRPKRKKIDPSDAMQQ 106
+TL P++ +++ S + S +SS S TP+ + + R+ +
Sbjct: 1471 SSTLMPRKRGRPRKKTNSGSSLSTPLSQESSLARSGRKNTPSYKQKALRRYC------ME 1524
Query: 107 IYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDF 166
I++ + N + EDG + F+ P ++ P Y+ ++ PI KI++ +K D Y D+ +
Sbjct: 1525 IFERLYNLQSEDGRFVNGLFLYPPNRKLYPDYYIIIKRPIALGKIKRNIKNDRYGDVGEL 1584
Query: 167 QADIELL 173
AD L+
Sbjct: 1585 IADFMLM 1591
>sp|Q91Y44|BRDT_MOUSE Bromodomain testis-specific protein OS=Mus musculus GN=Brdt PE=1
SV=3
Length = 956
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 74/333 (22%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K + P+YY +I P+DL TI +R+++ Y + +D M N +N+ G I A
Sbjct: 59 KLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMA 118
Query: 366 KALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAALESEDDESEDDEEID 425
+AL+KL K ++ Q + GK ERI+ + Q A+++A E ++ ++
Sbjct: 119 QALEKLFMQKLSQMPQEEQVVGGK-ERIK----KDIQQKIAVSSAKEQIPSKAAENVFKR 173
Query: 426 QEDPN-------SPLWQVYDAIRNAKTQGVIFFFFGVT--------AASLQK-------- 462
QE P+ SPL +A +Q ++ GV S+ K
Sbjct: 174 QEIPSGLPDISLSPLNMAQEAPPICDSQSLVQITKGVKRRADTTTPTTSIAKASSESPPT 233
Query: 463 --------MRILYNTIKETC-----------EPKTGRQLSH---IFQRLPSRHDYP---- 496
M + NT+K K QL H I + + ++ P
Sbjct: 234 LRETKPVNMPVKENTVKNVLPDSQQQHKVLKTVKVTEQLKHCSEILKEMLAKKHLPYAWP 293
Query: 497 -------------DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEP 543
+YY+V++ P+D+ I K+ +Y+ E AD MF N KYN P
Sbjct: 294 FYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYKYNPP 353
Query: 544 DSHIYKDALSLQRIVLQTKMHLREDEDSVPDVP 576
D + A +LQ + ++H + +PD P
Sbjct: 354 DHEVVAMARTLQDVF---ELHFAK----IPDEP 379
Score = 37.4 bits (85), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 13/81 (16%)
Query: 289 TDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMT 348
DAD+ LH YYDV+ P+DL TI ++ + +Y + D+ LM
Sbjct: 298 VDADALGLHN-------------YYDVVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMF 344
Query: 349 KNACTFNEPGSQIYKDAKALK 369
N +N P ++ A+ L+
Sbjct: 345 MNCYKYNPPDHEVVAMARTLQ 365
Score = 37.4 bits (85), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 137 SYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVT----NPID 180
+Y++VV NP+D I+ K+ EY D +F AD+ L+ + NP D
Sbjct: 307 NYYDVVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYKYNPPD 354
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEH------RDAQEL 227
VV NP+D I+ K+ EY D +F AD+ L+ N YK N +H R Q++
Sbjct: 311 VVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNC---YKYNPPDHEVVAMARTLQDV 367
Query: 228 MEL 230
EL
Sbjct: 368 FEL 370
>sp|P53236|RSC1_YEAST Chromatin structure-remodeling complex subunit RSC1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC1 PE=1 SV=1
Length = 928
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 161/388 (41%), Gaps = 58/388 (14%)
Query: 282 FNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDME 341
++AV D + ++ +F +LP KK YP+YY +I PI L T+ +R+ Y S D
Sbjct: 17 YDAVFHLKDENGIEIYPIFNVLPPKKEYPDYYIIIRNPISLNTLKKRLP--HYTSPQDFV 74
Query: 342 KDLILMTKNACTFNEPGSQIYKDAKALK-----KLVQTKKMEIEQGKFTPAGKSERIRSK 396
D + NA T+N S IYK A L+ K+V + + + G+ I ++
Sbjct: 75 NDFAQIPWNAMTYNAKDSVIYKYAILLESFIKGKIVHNIRKHYPEVTYPSLGRIPEIFAE 134
Query: 397 RIRGGQSLSAITAALESEDDESED----------DEEIDQEDP----------NSPLWQV 436
++ S E+++ + D I + P NSP +
Sbjct: 135 SMQPSDLSSNPINTQENDEKAGLNPEMKMAFAKLDSSITERKPTNQDYRMQQKNSPAFPT 194
Query: 437 YDAIRNAK---TQGVIFFFFGVTAAS-----------------LQKMRILYNTIKETCEP 476
+ A + + + + +T+A + +++ + ++ +
Sbjct: 195 HSASITPQPLASPTPVVNYANITSAHPKTHVRRGRPPVIDLPYVLRIKNILKMMRREVD- 253
Query: 477 KTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDN 536
+ + L+ F++LP R++ P YY VI P+ + I K++ +Y + DF M N
Sbjct: 254 QNNKTLTLCFEKLPDRNEEPTYYSVITDPICLMDIRKKVKSRKYRNFHTFEEDFQLMLTN 313
Query: 537 -ACKYNEPDSHIYKDALSLQRIVLQTKMHL-REDEDSVPDVPAAVQELLTSLFTSVYNHQ 594
Y++ S+I + L + ++ L + DED +P+ EL L N +
Sbjct: 314 FKLYYSQDQSNIIRAQLLEKNFNRLVRIELSKPDEDYLPE-----GELRYPLDDVEINDE 368
Query: 595 KQCLGSF---HVLNVDNKPLKRRLYTLC 619
K +G + H N NKP+ +++ L
Sbjct: 369 KYQIGDWVLLHNPNDINKPIVGQIFRLW 396
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 83 TSETPTMQTRPKRKKIDPSDAMQQIYDVIRNFKKE---DGALLCDPFIRIPKKRQEPSYH 139
TS P R R + + +I ++++ ++E + L F ++P + +EP+Y+
Sbjct: 217 TSAHPKTHVRRGRPPVIDLPYVLRIKNILKMMRREVDQNNKTLTLCFEKLPDRNEEPTYY 276
Query: 140 EVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVV 175
V+T+PI + I++K+K+ +Y + F+ D +L++
Sbjct: 277 SVITDPICLMDIRKKVKSRKYRNFHTFEEDFQLMLT 312
Score = 40.0 bits (92), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 277 QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
+ +++ + D +++ L F+ LP + P YY VI PI L I ++++ KY +
Sbjct: 240 RIKNILKMMRREVDQNNKTLTLCFEKLPDRNEEPTYYSVITDPICLMDIRKKVKSRKYRN 299
Query: 337 LGDMEKDLILMTKN 350
E+D LM N
Sbjct: 300 FHTFEEDFQLMLTN 313
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFH 232
V+T+PI + I++K+K+ +Y + F+ D +L++ N K +Y ++ AQ L + F+
Sbjct: 278 VITDPICLMDIRKKVKSRKYRNFHTFEEDFQLMLTNFKLYYSQDQSNIIRAQLLEKNFN 336
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 108 YDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLK--TDEYDDLSD 165
YD + + K E+G + F +P K++ P Y+ ++ NPI ++++L T D ++D
Sbjct: 17 YDAVFHLKDENGIEIYPIFNVLPPKKEYPDYYIIIRNPISLNTLKKRLPHYTSPQDFVND 76
Query: 166 F 166
F
Sbjct: 77 F 77
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%)
Query: 475 EPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMF 534
E + GR+LS IF PS+ YPDYY +I+ PV + I + + Y L E + DF +F
Sbjct: 1565 ENEAGRKLSDIFLSKPSKALYPDYYMIIKYPVAFDNINTHIETLAYNSLKETLQDFHLIF 1624
Query: 535 DNACKYNEPDSHIYKDALSLQRIV 558
NA YN S +Y+D+L L+++V
Sbjct: 1625 SNARIYNTEGSVVYEDSLELEKVV 1648
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%)
Query: 277 QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
Q DL++ + + R L ++F PSK YP+YY +I P+ I I+ Y S
Sbjct: 1553 QALDLYHFALNYENEAGRKLSDIFLSKPSKALYPDYYMIIKYPVAFDNINTHIETLAYNS 1612
Query: 337 LGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
L + +D L+ NA +N GS +Y+D+ L+K+V K EI
Sbjct: 1613 LKETLQDFHLIFSNARIYNTEGSVVYEDSLELEKVVTKKYCEI 1655
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 38/88 (43%)
Query: 86 TPTMQTRPKRKKIDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNP 145
TP T P + + +Y N++ E G L D F+ P K P Y+ ++ P
Sbjct: 1536 TPAAATSPIDIREKVAKQALDLYHFALNYENEAGRKLSDIFLSKPSKALYPDYYMIIKYP 1595
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELL 173
+ F I ++T Y+ L + D L+
Sbjct: 1596 VAFDNINTHIETLAYNSLKETLQDFHLI 1623
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 24/258 (9%)
Query: 304 PSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYK 363
P K+ P+Y ++ P+DL TI +++ +Y+ + D+ LM N +N S +
Sbjct: 115 PIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQEFIDDMNLMFSNCFLYNGTESPVGS 174
Query: 364 DAKALKKLV--QTKKM-EIEQGKFTPAGKSERIRSKRIRGGQSLSAITAALESEDDESED 420
KAL+++ Q K++ + EQ P KS++ SA TA + + S
Sbjct: 175 MGKALQEVFERQLKQLPDAEQPAAAPVKKSKQ-----------KSASTAPPRTRRNSSVS 223
Query: 421 DEEIDQEDPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQKMRILYNTIKETCEPKTGR 480
+P A + V+ + +MR +KE + +
Sbjct: 224 STSASVAASTAP---------KAASPAVLPEGKPRRRKNNSQMRFCSTVLKELYKRQYES 274
Query: 481 QLSHIFQRL-PSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACK 539
+Q + P D PDY++VI++P+D+ I SKL N+Y L+E +D + MF+N
Sbjct: 275 FAFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFT 334
Query: 540 YNEPDSHIYKDALSLQRI 557
YN P + ++ L+ +
Sbjct: 335 YNPPGTPVHVMGRQLENV 352
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 29/231 (12%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
+V NP+D I++KL + EY +F D+ L+ N + S + L E+F
Sbjct: 126 IVKNPMDLGTIEKKLTSYEYSVPQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFER 185
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDS-RDSSICTEDEQNQCEDLFNAVMTSTDAD 292
+L + + K+S ++ + R+SS+ + A + +
Sbjct: 186 QLKQLPDAEQPAAAPVKKSKQKSASTAPPRTRRNSSVSSTSASVAASTAPKAASPAVLPE 245
Query: 293 SRP---------------LHEVFQLLPSKKRYPEY-------------YDVIDVPIDLRT 324
+P L E+++ +P Y +DVI P+DL T
Sbjct: 246 GKPRRRKNNSQMRFCSTVLKELYKRQYESFAFPFYQPVDPVACDCPDYFDVIKEPMDLST 305
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTK 375
I ++ +Y++L + E D++LM N T+N PG+ ++ + L+ + + K
Sbjct: 306 IQSKLNKNEYSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEK 356
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTN 177
P Y +V+ P+D IQ KL +EY L +F++DI LL+ N
Sbjct: 291 PDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDI-LLMFNN 331
>sp|Q02206|RSC4_YEAST Chromatin structure-remodeling complex subunit RSC4
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC4 PE=1 SV=2
Length = 625
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 31/207 (14%)
Query: 178 PIDFIKIQQKLKTDEY--------DDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELME 229
P + KIQQ + +E D S+F D+ELL KN + + + +S +++ +++
Sbjct: 90 PQYYYKIQQPMSINEIKSRDYEYEDGPSNFLLDVELLTKNCQAYNEYDSLIVKNSMQVVM 149
Query: 230 LF--------HSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDL 281
L + RN L+N S+ ++ ++ D+ TE + NQ L
Sbjct: 150 LIEFEVLKAKNLKRNYLIN-------SEVKAKLLHYLNKLVDA------TEKKINQA--L 194
Query: 282 FNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDME 341
A D L E F L K PEYY+++ P+ L + + ++ G+Y+ + D
Sbjct: 195 LGASSPKNLDDKVKLSEPFMELVDKDELPEYYEIVHSPMALSIVKQNLEIGQYSKIYDFI 254
Query: 342 KDLILMTKNACTFNEPGSQIYKDAKAL 368
D++L+ +NA FN+P + IYKDA L
Sbjct: 255 IDMLLVFQNAHIFNDPSALIYKDATTL 281
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 481 QLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKY 540
+LS F L + + P+YYE++ P+ + ++ L QY + + + D + +F NA +
Sbjct: 208 KLSEPFMELVDKDELPEYYEIVHSPMALSIVKQNLEIGQYSKIYDFIIDMLLVFQNAHIF 267
Query: 541 NEPDSHIYKDALSL 554
N+P + IYKDA +L
Sbjct: 268 NDPSALIYKDATTL 281
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 117 EDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVT 176
+D L +PF+ + K + P Y+E+V +P+ ++Q L+ +Y + DF D+ LLV
Sbjct: 204 DDKVKLSEPFMELVDKDELPEYYEIVHSPMALSIVKQNLEIGQYSKIYDFIIDM-LLVFQ 262
Query: 177 N 177
N
Sbjct: 263 N 263
Score = 36.2 bits (82), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 486 FQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLD---EMVADFIQMFDNACKYNE 542
F +LPSR +P YY I++P+ + I S+ YE+ D + D + N YNE
Sbjct: 80 FIKLPSRKFHPQYYYKIQQPMSINEIKSR----DYEYEDGPSNFLLDVELLTKNCQAYNE 135
Query: 543 PDSHIYKDALSLQRIV 558
DS I K+++ + ++
Sbjct: 136 YDSLIVKNSMQVVMLI 151
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 483 SHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNE 542
+ IF++LPS+ DYPDY++VI KP+ +++I + Y+ L+E+ MF+NA YNE
Sbjct: 1275 TSIFEKLPSKRDYPDYFKVIEKPMAIDIILKNCKNGTYKTLEEVRQALQTMFENARFYNE 1334
Query: 543 PDSHIYKDA 551
S +Y DA
Sbjct: 1335 EGSWVYVDA 1343
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 290 DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
+ DS P +F+ LPSK+ YP+Y+ VI+ P+ + I + ++G Y +L ++ + L M +
Sbjct: 1268 EVDSHPRTSIFEKLPSKRDYPDYFKVIEKPMAIDIILKNCKNGTYKTLEEVRQALQTMFE 1327
Query: 350 NACTFNEPGSQIYKDAKALKKLV 372
NA +NE GS +Y DA L +
Sbjct: 1328 NARFYNEEGSWVYVDADKLNEFT 1350
>sp|Q9UUK2|GCN5_SCHPO Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gcn5 PE=1 SV=1
Length = 454
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 486 FQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDS 545
F + S+ D PDYYEVI P+D+ + +LR NQYE ++E + D +FDN YN+ ++
Sbjct: 368 FMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRDAKYIFDNCRSYNDSNT 427
Query: 546 HIYKDALSLQRIVLQTKMHLREDEDS 571
YK+A L++ Q K LRE E S
Sbjct: 428 TYYKNADRLEKF-FQKK--LRETEYS 450
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%)
Query: 286 MTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
M T+ + P F SK+ P+YY+VI+ P+DL T+ R+++ +Y S+ + +D
Sbjct: 354 MLFTEMQNHPSSWPFMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRDAK 413
Query: 346 LMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIE 380
+ N ++N+ + YK+A L+K Q K E E
Sbjct: 414 YIFDNCRSYNDSNTTYYKNADRLEKFFQKKLRETE 448
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 30/49 (61%)
Query: 125 PFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
PF++ K P Y+EV+ +P+D ++ +L+ ++Y+ + +F D + +
Sbjct: 367 PFMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRDAKYI 415
Score = 32.7 bits (73), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/58 (20%), Positives = 34/58 (58%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELF 231
V+ +P+D ++ +L+ ++Y+ + +F D + + N +++ N+ +++A L + F
Sbjct: 383 VIEHPMDLSTMEFRLRNNQYESVEEFIRDAKYIFDNCRSYNDSNTTYYKNADRLEKFF 440
>sp|Q07442|BDF2_YEAST Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF2 PE=1 SV=1
Length = 638
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 28/279 (10%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P Y++ + P+DL I ++Q Y S+ + D M N FN P S I AK ++
Sbjct: 170 PHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGPESSISSMAKRIQ 229
Query: 370 KLVQTKKMEIEQGKFTPAG---KSERIRSKRIRGGQSLSAITAALESEDD---ESEDDEE 423
K + KK+ + PA K+ R R K L I ++ + +D ES + E
Sbjct: 230 KYFE-KKLSAMPPRVLPASALKKTSRNRKKNEDMDSPL-VIRRSVSTTNDNIGESGNREG 287
Query: 424 IDQEDPNSPLW-----QVYDAIRNAKTQGVIFFFFGVTAASLQK-MRILYNTIKETCEPK 477
+ P + ++D N+K + + +LQK R +K K
Sbjct: 288 VSGGRPKRTIHPPKSKDLFDIYENSKPK----------SKTLQKKFRTCLKILKVLMSKK 337
Query: 478 TGRQLSHIFQRL-PSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDN 536
Q + P + P+Y++V++ P+D+ I++ L +Y+ +D+ V D +F N
Sbjct: 338 NSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYN 397
Query: 537 ACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDV 575
++N + ++ L+ + H E++D + ++
Sbjct: 398 CFQFNPEGNEVHSMGKKLKELF---NFHWLENQDILNEI 433
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 114/275 (41%), Gaps = 27/275 (9%)
Query: 125 PFIRI--PKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFI 182
PF++ P P Y V P+D I+ KL+ + Y + +D + +V N ++F
Sbjct: 157 PFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMV-DNCLNFN 215
Query: 183 KIQQKLKTDEYDDLSDFQADIE-----LLVKNAKTFYKRNSQEHRDAQELMELFHS---T 234
+ + + F+ + +L +A RN +++ D + + S T
Sbjct: 216 GPESSISSMAKRIQKYFEKKLSAMPPRVLPASALKKTSRNRKKNEDMDSPLVIRRSVSTT 275
Query: 235 RNKLLNPQSHEGTSQKRSMDFMMASET-------EDSRDSSICTEDEQNQCEDLFNAVMT 287
+ + + EG S R + ++ E+S+ S + + C + +M+
Sbjct: 276 NDNIGESGNREGVSGGRPKRTIHPPKSKDLFDIYENSKPKSKTLQKKFRTCLKILKVLMS 335
Query: 288 STDADSRPLHEVFQLL----PSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKD 343
++D F L P P Y+DV+ P+DL TI+ + + KY ++ D
Sbjct: 336 KKNSDIN-----FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDD 390
Query: 344 LILMTKNACTFNEPGSQIYKDAKALKKLVQTKKME 378
L L+ N FN G++++ K LK+L +E
Sbjct: 391 LNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWLE 425
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 490 PSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYK 549
P + P Y+ ++ P+D+ +I +KL+ N Y ++++ +DF M DN +N P+S I
Sbjct: 164 PIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGPESSISS 223
Query: 550 DALSLQR 556
A +Q+
Sbjct: 224 MAKRIQK 230
>sp|Q8WWQ0|PHIP_HUMAN PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=2
Length = 1821
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 37/224 (16%)
Query: 161 DDLSDFQADIEL-------LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTF 213
D S F A ++L VV P D I+Q+L+ Y +S ++ + N +TF
Sbjct: 1179 DIASAFVAPVDLQAYPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTF 1238
Query: 214 YKRNSQEHRDAQ----------------ELMELFHSTRNKLLNPQSHE-------GTSQK 250
+ S + A+ ++ L++S + K+L+ E GTS +
Sbjct: 1239 NEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEDEEKDADVPGTSTR 1298
Query: 251 RSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYP 310
+ D + R S + + QCE+L N + DS P + LL YP
Sbjct: 1299 KRKDHQPRRRLRN-RAQSYDIQAWKKQCEELLNLIFQC--EDSEPFRQPVDLL----EYP 1351
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTF 354
+Y D+ID P+D T+ ++ G Y S ++ KD+ L+ N+ +
Sbjct: 1352 DYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAY 1395
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
YP Y V+ P DL TI +R+++ Y + + ++ + N TFNEPGS I K AK +
Sbjct: 1193 YPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFV 1252
Query: 369 KKLV 372
L+
Sbjct: 1253 TDLL 1256
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPD-SHIYKDAL 552
+YPDY ++I P+D + L YE E+ D +F N+ Y S IY +L
Sbjct: 1349 EYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSL 1408
Query: 553 SL 554
L
Sbjct: 1409 RL 1410
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 495 YPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSL 554
YP Y V+ P D+ I +L Y + ++ + + N +NEP S I K A
Sbjct: 1193 YPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSA--- 1249
Query: 555 QRIVLQTKMHLREDEDSVPDVP 576
+ V +H +D+ +P
Sbjct: 1250 -KFVTDLLLHFIKDQTCYNIIP 1270
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 67 SSLTRSVDDDDDSSSHTSETPTMQTRPKRKKIDPSDAMQ---QIYDVIRNFKKEDGALL- 122
+S+ + V D + ++ P TR KRK P ++ Q YD I+ +KK+ LL
Sbjct: 1273 NSMKKKVLSDSEDEEKDADVPGTSTR-KRKDHQPRRRLRNRAQSYD-IQAWKKQCEELLN 1330
Query: 123 -------CDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVV 175
+PF + + P Y +++ P+DF +++ L+ Y+ + D+ L+
Sbjct: 1331 LIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFS 1390
Query: 176 TNPIDFIKIQQKLKTDEYDDLSDFQADIELLV---KNAKTFYKRNS 218
+ + ++ + + F+ I ++ K+A F+KRN+
Sbjct: 1391 NSKAYTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRNT 1436
>sp|Q06488|RSC2_YEAST Chromatin structure-remodeling complex subunit RSC2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC2 PE=1 SV=1
Length = 889
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 473 TCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQ 532
T + +G ++S IF LP + DYPDYY VI+ PV + K R Y + + D +Q
Sbjct: 30 TLKEDSGLEISPIFNVLPPKKDYPDYYAVIKNPVSFNTL--KKRIPHYTDAQQFMNDVVQ 87
Query: 533 MFDNACKYNEPDSHIYKDALSLQRIVLQT 561
+ NA YN DS IYK AL L++ + T
Sbjct: 88 IPWNAKTYNTRDSGIYKYALVLEKYLKDT 116
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 296 LHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFN 355
+ +F +LP KK YP+YY VI P+ T+ +RI Y D++ + NA T+N
Sbjct: 39 ISPIFNVLPPKKDYPDYYAVIKNPVSFNTLKKRIP--HYTDAQQFMNDVVQIPWNAKTYN 96
Query: 356 EPGSQIYKDAKALKKLVQ 373
S IYK A L+K ++
Sbjct: 97 TRDSGIYKYALVLEKYLK 114
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 13/176 (7%)
Query: 460 LQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQ 519
+Q+M+ + +K+ +G L+ +F+RLP RH +YY +I P+ ++ I K++ +
Sbjct: 278 IQRMKNVMKVLKKEVL-DSGIGLTDLFERLPDRHRDANYYIMIANPISLQDINKKVKTRR 336
Query: 520 YEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPD---VP 576
Y+ E DF M N + D +++ + I+ +T L E S PD +P
Sbjct: 337 YKTFQEFQNDFNLMLTNFRISHRGDP----ESIKISNILEKTFTSLARFELSKPDRSFIP 392
Query: 577 AAVQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQ 632
EL L + N+ +G + +L N P K + + + ++ DG+Q
Sbjct: 393 EG--ELRYPLDEVIVNNISYHVGDWALLRNQNDPQKPIVGQIFRL---WKTPDGKQ 443
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 104 MQQIYDVIRNFKKE---DGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEY 160
+Q++ +V++ KKE G L D F R+P + ++ +Y+ ++ NPI I +K+KT Y
Sbjct: 278 IQRMKNVMKVLKKEVLDSGIGLTDLFERLPDRHRDANYYIMIANPISLQDINKKVKTRRY 337
Query: 161 DDLSDFQADIELLVVT 176
+FQ D L++
Sbjct: 338 KTFQEFQNDFNLMLTN 353
Score = 36.6 bits (83), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 157 TDEYDDLSDFQADIEL-LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYK 215
TD ++ L D D +++ NPI I +K+KT Y +FQ D L++ N + ++
Sbjct: 300 TDLFERLPDRHRDANYYIMIANPISLQDINKKVKTRRYKTFQEFQNDFNLMLTNFRISHR 359
Query: 216 RNSQEHRDAQELMELFHS 233
+ + + + L + F S
Sbjct: 360 GDPESIKISNILEKTFTS 377
Score = 36.2 bits (82), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 296 LHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKN 350
L ++F+ LP + R YY +I PI L+ I ++++ +Y + + + D LM N
Sbjct: 299 LTDLFERLPDRHRDANYYIMIANPISLQDINKKVKTRRYKTFQEFQNDFNLMLTN 353
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 116 KEDGALLCDPFIRI-PKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADI 170
KED L P + P K+ P Y+ V+ NP+ F +++++ Y D F D+
Sbjct: 32 KEDSGLEISPIFNVLPPKKDYPDYYAVIKNPVSFNTLKKRIP--HYTDAQQFMNDV 85
>sp|Q9HGP4|YK82_SCHPO Bromodomain-containing protein C631.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC631.02 PE=1 SV=3
Length = 727
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 12/244 (4%)
Query: 130 PKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLK 189
P K+ P Y ++ NPID +Q+K + Y F D+ L+ +N + + +
Sbjct: 260 PVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMF-SNCFLYNGTESPVG 318
Query: 190 TDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQ 249
+ + F+ ++ L T Y R + R + R + S G
Sbjct: 319 VMGKNLQATFERQLKQLPSAYVTSYSRPGRRPRSMTAPKGGARTRRQAAMYSNSSSGI-- 376
Query: 250 KRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRY 309
+ +M + +D+ + C Q+ ++L +A + P ++ P+
Sbjct: 377 RETMYDLKPHRRKDAAEMKFC----QSVLKELLKK---QHEAYAYPFYKPVN--PTACGC 427
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ VI P+DL T+ ++ +YAS+ E D++LM KN FN G+ ++ K L+
Sbjct: 428 PDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLE 487
Query: 370 KLVQ 373
+ Q
Sbjct: 488 SIFQ 491
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 30/257 (11%)
Query: 304 PSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYK 363
P K+ P+Y +I PIDL T+ ++ G Y+S D+ LM N +N S +
Sbjct: 260 PVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFLYNGTESPVGV 319
Query: 364 DAKALKKLVQTKKMEIEQGKFTPAGK-SERIRSKRIRGGQSLSAITAALESEDDESEDDE 422
K L+ + + ++ T + R RS G + + AA+ S + S
Sbjct: 320 MGKNLQATFERQLKQLPSAYVTSYSRPGRRPRSMTAPKGGARTRRQAAMYS--NSSSGIR 377
Query: 423 EIDQEDPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQKMRILYNTIKETCEPKTGRQL 482
E +YD + + +M+ + +KE + K
Sbjct: 378 ET-----------MYDLKPHRRKDAA-------------EMKFCQSVLKELLK-KQHEAY 412
Query: 483 SHIFQRL--PSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKY 540
++ F + P+ PDY++VI+ P+D+ + +KL +N+Y + AD + MF N K+
Sbjct: 413 AYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKF 472
Query: 541 NEPDSHIYKDALSLQRI 557
N + ++ L+ I
Sbjct: 473 NSAGTPVHLMGKKLESI 489
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 78 DSSSHTSETPTMQTRPKRKKIDPSDAMQQIY--DVIRNFKKEDGALLCDPFIRI--PKKR 133
+SSS ET +P R+K DA + + V++ K+ PF + P
Sbjct: 371 NSSSGIRET-MYDLKPHRRK----DAAEMKFCQSVLKELLKKQHEAYAYPFYKPVNPTAC 425
Query: 134 QEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
P Y +V+ +P+D +Q KL +EY + F+AD+ L+
Sbjct: 426 GCPDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLM 465
>sp|Q8VDD9|PHIP_MOUSE PH-interacting protein OS=Mus musculus GN=Phip PE=1 SV=2
Length = 1821
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 37/220 (16%)
Query: 161 DDLSDFQADIEL-------LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTF 213
D S F A ++L VV P D I+Q+L+ Y S ++ + N +TF
Sbjct: 1179 DIASAFVAPVDLQAYPMYCTVVAYPTDLSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTF 1238
Query: 214 YKRNSQEHRDAQ----------------ELMELFHSTRNKLLNPQSHE-------GTSQK 250
+ S + A+ ++ L++S + K+L+ E GTS +
Sbjct: 1239 NEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADVPGTSTR 1298
Query: 251 RSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYP 310
+ D + R S + + QC++L N + DS P + LL YP
Sbjct: 1299 KRKDHQPRRRLRN-RAQSYDIQAWKKQCQELLNLIFQC--EDSEPFRQPVDLL----EYP 1351
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKN 350
+Y D+ID P+D T+ ++ G Y S ++ KD+ L+ N
Sbjct: 1352 DYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSN 1391
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
YP Y V+ P DL TI +R+++ Y + ++ + N TFNEPGS I K AK +
Sbjct: 1193 YPMYCTVVAYPTDLSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFV 1252
Query: 369 KKLV 372
L+
Sbjct: 1253 TDLL 1256
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 67 SSLTRSVDDDDDSSSHTSETPTMQTRPKRKKIDPSDAMQ---QIYDVIRNFKKEDGALL- 122
+S+ + V D + ++ P TR KRK P ++ Q YD I+ +KK+ LL
Sbjct: 1273 NSMKKKVLSDSEEEEKDADVPGTSTR-KRKDHQPRRRLRNRAQSYD-IQAWKKQCQELLN 1330
Query: 123 -------CDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
+PF + + P Y +++ P+DF +++ L+ Y+ + D+ L+
Sbjct: 1331 LIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLI 1388
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 495 YPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSL 554
YP Y V+ P D+ I +L Y ++ + + N +NEP S I K A
Sbjct: 1193 YPMYCTVVAYPTDLSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSA--- 1249
Query: 555 QRIVLQTKMHLREDEDSVPDVP 576
+ V +H +D+ +P
Sbjct: 1250 -KFVTDLLLHFIKDQTCYNIIP 1270
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPD-SHIYKDAL 552
+YPDY ++I P+D + L YE E+ D +F N Y S IY +L
Sbjct: 1349 EYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNFKAYTPSKRSRIYSMSL 1408
Query: 553 SL 554
L
Sbjct: 1409 RL 1410
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALS 553
+ PDYY+VI++P+D++ + KL N Y L E + D ++FDN YN +S YK A +
Sbjct: 2589 EAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDMTKIFDNCRYYNPKESSFYKCAEA 2648
Query: 554 LQRIVLQTKMHLRED 568
L+ +Q + RE+
Sbjct: 2649 LESYFVQKIKNFREN 2663
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 307 KRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAK 366
K P+YY VI P+DL+ + +++ Y L + D+ + N +N S YK A+
Sbjct: 2588 KEAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDMTKIFDNCRYYNPKESSFYKCAE 2647
Query: 367 ALK 369
AL+
Sbjct: 2648 ALE 2650
Score = 36.6 bits (83), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 96 KKIDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKL 155
KK+ +D ++++ ++I+ + A PF+ ++ P Y++V+ P+D +++ KL
Sbjct: 2555 KKLTSND-VEELKNLIKQMQLHKSAW---PFMEPVDPKEAPDYYKVIKEPMDLKRMEIKL 2610
Query: 156 KTDEYDDLSDFQADI 170
+++ Y LS+F D+
Sbjct: 2611 ESNTYTKLSEFIGDM 2625
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 493 HDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDAL 552
+D PDYY VI++P+D+ + +++ YE L E VAD ++FDN YN DS Y+ A
Sbjct: 2959 NDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAE 3018
Query: 553 SLQRIVLQ 560
L+ +Q
Sbjct: 3019 VLESFFVQ 3026
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+YY VI P+DL T+ R+Q Y L + D+ + N +N S Y+ A+ L+
Sbjct: 2962 PDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLE 3021
Query: 370 KL 371
Sbjct: 3022 SF 3023
>sp|Q6BER5|NU301_CAEEL Nucleosome-remodeling factor subunit NURF301-like OS=Caenorhabditis
elegans GN=nurf-1 PE=1 SV=2
Length = 2194
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 454 GVTAASLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIAS 513
G + S+Q R Y + E E ++S F+ +++PDY + I+KP+D+ I
Sbjct: 2023 GSSRVSVQLTRADYTHVFELLELLLEHRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITK 2082
Query: 514 KLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLRE 567
K+ +Y +L + V D QMF+NA YN + ++K A ++Q + + + +RE
Sbjct: 2083 KVERTEYLYLSQFVNDVNQMFENAKTYNPKGNAVFKCAETMQEVFDKKLIDVRE 2136
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%)
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
+P+Y I P+DL TI ++++ +Y L D+ M +NA T+N G+ ++K A+ +
Sbjct: 2064 FPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVNQMFENAKTYNPKGNAVFKCAETM 2123
Query: 369 KKLVQTKKMEIEQ 381
+++ K +++ +
Sbjct: 2124 QEVFDKKLIDVRE 2136
Score = 37.0 bits (84), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 17/88 (19%)
Query: 144 NPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADI 203
NP+D +E+ D F + P+D I +K++ EY LS F D+
Sbjct: 2057 NPVDL---------NEFPDYEKF--------IKKPMDLSTITKKVERTEYLYLSQFVNDV 2099
Query: 204 ELLVKNAKTFYKRNSQEHRDAQELMELF 231
+ +NAKT+ + + + A+ + E+F
Sbjct: 2100 NQMFENAKTYNPKGNAVFKCAETMQEVF 2127
>sp|Q9AR19|GCN5_ARATH Histone acetyltransferase GCN5 OS=Arabidopsis thaliana GN=HAG1 PE=1
SV=1
Length = 568
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYE-HLDEMVADFIQMFDNACKYNEPDSHIYKDAL 552
D PDYY++I+ P+D+++IA ++ QY LD VAD +MF+N YN PD+ YK A
Sbjct: 488 DVPDYYDIIKDPIDLKVIAKRVESEQYYVTLDMFVADARRMFNNCRTYNSPDTIYYKCAT 547
Query: 553 SLQ 555
L+
Sbjct: 548 RLE 550
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 275 QNQCEDLFNAVMTSTD--ADSRPLHEVFQLLPSKKR-YPEYYDVIDVPIDLRTIARRIQD 331
Q Q L A++ + AD+ P E P R P+YYD+I PIDL+ IA+R++
Sbjct: 457 QKQLNALMRALLKTMQDHADAWPFKE-----PVDSRDVPDYYDIIKDPIDLKVIAKRVES 511
Query: 332 GKYASLGDM-EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTK 375
+Y DM D M N T+N P + YK A L+ +K
Sbjct: 512 EQYYVTLDMFVADARRMFNNCRTYNSPDTIYYKCATRLETHFHSK 556
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALS 553
+ PDY+++I++P+DM I +L N Y E + DF MF+N YN+P + A +
Sbjct: 69 NLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQT 128
Query: 554 LQRIVLQ 560
L+++ LQ
Sbjct: 129 LEKVFLQ 135
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+KP+D+ + K+ +Y+ E AD +F N KYN PD + LQ
Sbjct: 516 DYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQD 575
Query: 557 I 557
+
Sbjct: 576 V 576
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+Y+ +I P+D+ TI +R+++ Y S + +D M N +N+PG + A
Sbjct: 67 KLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMA 126
Query: 366 KALKKLVQTK-----KMEIEQGKFTPAGKSERIRS 395
+ L+K+ K K E+E T G ++ R+
Sbjct: 127 QTLEKVFLQKIESMPKEELELEPVTAKGGKKKQRA 161
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEP 357
+Y+D+I P+DL T+ R++ + +Y S + D+ L+ N +N P
Sbjct: 516 DYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPP 562
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 138 YHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVT----NPI--DFIKIQQKLK 189
YH+++ P+D +++K+ EY +F AD+ L+ NP D + + +KL+
Sbjct: 517 YHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQ 574
>sp|Q54BA2|Y3800_DICDI Ankyrin repeat, bromo and BTB domain-containing protein
DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800
PE=4 SV=1
Length = 806
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 278 CEDLFNAVMT--STDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYA 335
C+ L N + ++ A RP+ P + P+Y+DVI P+DL TI ++ + Y+
Sbjct: 525 CKGLINGMFKKKTSLAFQRPVD------PLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYS 578
Query: 336 SLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
++ D D+ LM +NA T+N S ++K AK L
Sbjct: 579 TIKDFAADVRLMFENALTYNADSSPVWKHAKTL 611
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 480 RQLSHIFQRL--PSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
++ S FQR P PDY++VI+ P+D+ I KL N Y + + AD MF+NA
Sbjct: 535 KKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADVRLMFENA 594
Query: 538 CKYNEPDSHIYKDALSL 554
YN S ++K A +L
Sbjct: 595 LTYNADSSPVWKHAKTL 611
Score = 40.0 bits (92), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELF 231
V+ +P+D I+ KL + Y + DF AD+ L+ +NA T+ +S + A+ L+ F
Sbjct: 558 VIKHPMDLGTIKGKLDNNGYSTIKDFAADVRLMFENALTYNADSSPVWKHAKTLLNAF 615
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
P Y +V+ +P+D I+ KL + Y + DF AD+ L+
Sbjct: 553 PDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADVRLM 590
>sp|Q92831|KAT2B_HUMAN Histone acetyltransferase KAT2B OS=Homo sapiens GN=KAT2B PE=1 SV=3
Length = 832
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LY+T+K + Q + F R + P YYEVIR P+D++ ++ +L+ Y
Sbjct: 728 LYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKKL 787
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVL 559
+AD ++F N +YN P+S YK A L++
Sbjct: 788 FMADLQRVFTNCKEYNPPESEYYKCANILEKFFF 821
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P YY+VI P+DL+T++ R+++ Y S DL + N +N P S+ YK A L+
Sbjct: 758 PGYYEVIRFPMDLKTMSERLKNRYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCANILE 817
Query: 370 KLVQTK 375
K +K
Sbjct: 818 KFFFSK 823
Score = 36.6 bits (83), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 83 TSETPTMQTRPKRKKIDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVV 142
T P+ + + K + DP + +++ K A PF+ K+ + P Y+EV+
Sbjct: 709 TGWKPSGKEKSKEPR-DPDQLYSTLKSILQQVKSHQSAW---PFMEPVKRTEAPGYYEVI 764
Query: 143 TNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTN 177
P+D + ++LK Y F AD++ V TN
Sbjct: 765 RFPMDLKTMSERLKNRYYVSKKLFMADLQ-RVFTN 798
>sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1
Length = 726
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALS 553
+ PDY+++I+ P+DM I +L N Y E + DF MF N YN+P I A +
Sbjct: 69 NLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQA 128
Query: 554 LQRIVLQTKMHLREDE-DSVPDVP 576
L++I LQ + ++E + +P P
Sbjct: 129 LEKIFLQKVAQMPQEEVELLPPAP 152
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKA-- 367
P+Y+ +I P+D+ TI +R+++ Y S + +D M N +N+P I A+A
Sbjct: 71 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 130
Query: 368 ---LKKLVQTKKMEIEQGKFTPAGKSER-IRSKRIRGGQSLSAITA 409
L+K+ Q + E+E P GK + + G Q ++A+++
Sbjct: 131 KIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQSAGTQQVAAVSS 176
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ +Y AD MF N KYN PD + A LQ
Sbjct: 347 DYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQD 406
Query: 557 I 557
+
Sbjct: 407 V 407
Score = 37.0 bits (84), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
+Y+D+I P+DL T+ R++ +Y D+ LM N +N P ++ A+ L+
Sbjct: 347 DYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQ 405
Score = 36.2 bits (82), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 138 YHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
YH+++ +P+D +++K+ EY D F AD+ L+
Sbjct: 348 YHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLM 383
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 21/112 (18%)
Query: 123 CDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFI 182
CD +R ++ +Y P+D + L+ +Y D ++ +P+D
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVD----AEALELHDYHD-----------IIKHPMDLS 359
Query: 183 KIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRD---AQELMELF 231
+++K+ EY D F AD+ L+ N YK N +H A++L ++F
Sbjct: 360 TVKRKMDGREYPDAQGFAADVRLMFSNC---YKYNPPDHEVVAMARKLQDVF 408
>sp|Q9ESU6|BRD4_MOUSE Bromodomain-containing protein 4 OS=Mus musculus GN=Brd4 PE=1 SV=1
Length = 1400
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALS 553
+ PDYY++I+ P+DM I +L N Y + E + DF MF N YN+P I A +
Sbjct: 93 NLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEA 152
Query: 554 LQRIVLQTKMHLREDEDSV 572
L+++ LQ L +E +
Sbjct: 153 LEKLFLQKINELPTEETEI 171
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY ++I+ P+DM I SKL +Y E AD MF N KYN PD + A LQ
Sbjct: 390 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 449
Query: 557 I 557
+
Sbjct: 450 V 450
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+YY +I P+D+ TI +R+++ Y + + +D M N +N+PG I A+AL+
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 370 KL 371
KL
Sbjct: 155 KL 156
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRD---AQELMEL 230
++ +P+D I+ KL++ EY D +F AD+ L+ N YK N +H A++L ++
Sbjct: 394 IIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNC---YKYNPPDHEVVAMARKLQDV 450
Query: 231 F 231
F
Sbjct: 451 F 451
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
+Y D+I P+D+ TI +++ +Y + D+ LM N +N P ++ A+ L+
Sbjct: 390 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQ 448
>sp|Q8K2F0|BRD3_MOUSE Bromodomain-containing protein 3 OS=Mus musculus GN=Brd3 PE=1 SV=2
Length = 726
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALS 553
+ PDY+++I+ P+DM I +L N Y E + DF MF N YN+P I A +
Sbjct: 68 NLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQA 127
Query: 554 LQRIVLQTKMHLREDE-DSVPDVP 576
L++I LQ + ++E + +P P
Sbjct: 128 LEKIFLQKVAQMPQEEVELLPPAP 151
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ +I P+D+ TI +R+++ Y S + +D M N +N+P I A+AL+
Sbjct: 70 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 129
Query: 370 KL-----VQTKKMEIEQGKFTPAGKSER-IRSKRIRGGQSLSAITA 409
K+ Q + E+E P GK + + G Q ++A+++
Sbjct: 130 KIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQNAGSQQVAAVSS 175
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ +Y AD MF N KYN PD + A LQ
Sbjct: 346 DYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQD 405
Query: 557 I 557
+
Sbjct: 406 V 406
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 138 YHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
YH+++ +P+D +++K+ + EY D F ADI L+
Sbjct: 347 YHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLM 382
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
+Y+D+I P+DL T+ R++ +Y D+ LM N +N P ++ A+ L+
Sbjct: 346 DYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQ 404
Score = 37.0 bits (84), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 21/112 (18%)
Query: 123 CDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFI 182
CD +R ++ +Y P+D + L+ +Y D ++ +P+D
Sbjct: 314 CDSILREMLSKKHAAYAWPFYKPVD----AEALELHDYHD-----------IIKHPMDLS 358
Query: 183 KIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRD---AQELMELF 231
+++K+ + EY D F ADI L+ N YK N +H A++L ++F
Sbjct: 359 TVKRKMDSREYPDAQGFAADIRLMFSNC---YKYNPPDHEVVAMARKLQDVF 407
>sp|Q8IZX4|TAF1L_HUMAN Transcription initiation factor TFIID subunit 1-like OS=Homo sapiens
GN=TAF1L PE=1 SV=1
Length = 1826
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 108/282 (38%), Gaps = 65/282 (23%)
Query: 282 FNAVMTSTDADSR--PLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGD 339
++++ S D R P F + K +YY +I P+DL+T+ ++ Y S +
Sbjct: 1404 LSSILESIINDMRDLPNTHPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKCLYPSREE 1463
Query: 340 MEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIR 399
+ L L+ KN+ T+N P + + ++++ L E+++ K +
Sbjct: 1464 FREHLELIVKNSATYNGPKHSLTQISQSMLDLC-----------------DEKLKEKEDK 1506
Query: 400 GGQSLSAITAALESEDDESEDDEEIDQEDPNSPLWQVYDAIRNAKTQGVIFFFFGVTAAS 459
+ AI L+ +D + F F +
Sbjct: 1507 LARLEKAINPLLDDDDQ--------------------------------VAFSFILDNIV 1534
Query: 460 LQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQ 519
QKM + + S F ++ PDYY++I PVD+E I + ++
Sbjct: 1535 TQKMMAVPD--------------SWPFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHK 1580
Query: 520 YEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQT 561
Y+ + + D + N+ KYN P+S K A + I QT
Sbjct: 1581 YQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNICYQT 1622
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 24/198 (12%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++T P+D +++ ++ Y +F+ +EL+VKN+ T+ N +H Q +
Sbjct: 1439 IITRPMDLQTLRENVRKCLYPSREEFREHLELIVKNSATY---NGPKHSLTQISQSMLDL 1495
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTS---TD 290
KL K D + E + + +D+Q + + ++T
Sbjct: 1496 CDEKL-----------KEKEDKLARLE---KAINPLLDDDDQVAFSFILDNIVTQKMMAV 1541
Query: 291 ADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKN 350
DS P H +KK P+YY +I P+DL TI + I KY S D+ L+ N
Sbjct: 1542 PDSWPFHHPV----NKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLILAN 1597
Query: 351 ACTFNEPGSQIYKDAKAL 368
+ +N P SQ K A+ +
Sbjct: 1598 SVKYNGPESQYTKTAQEI 1615
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DYY++I +P+D++ + +R Y +E + N+ YN P + + + S+
Sbjct: 1435 DYYKIITRPMDLQTLRENVRKCLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLD 1494
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELL 583
+ + L+E ED + + A+ LL
Sbjct: 1495 LCDEK---LKEKEDKLARLEKAINPLL 1518
>sp|P34545|CBP1_CAEEL Protein cbp-1 OS=Caenorhabditis elegans GN=cbp-1 PE=2 SV=6
Length = 2017
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+E+I++P+D+E + KL QY++ + D M DNA YN +S +YK L L
Sbjct: 901 PDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAWLYNRKNSKVYKYGLKLS 960
Query: 556 RI 557
+
Sbjct: 961 EM 962
Score = 46.6 bits (109), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+++I P+DL T+ +++ G+Y + G D+ LM NA +N S++YK L
Sbjct: 901 PDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAWLYNRKNSKVYKYGLKLS 960
Query: 370 KL 371
++
Sbjct: 961 EM 962
Score = 45.1 bits (105), Expect = 0.002, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 80 SSHTSETPTMQTRPKRKKIDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYH 139
SS ++ P M K+++ DP ++ Q +++ K DG P + K+ P
Sbjct: 803 SSSSTPAPIMNGIVKKEE-DPEESSNQAPPSVKDTK--DGVAESKPKEQQAKREPTPPPT 859
Query: 140 E-VVTNPIDFIKIQQKL--KTDEYDDLSDFQA--DIELL-------VVTNPIDFIKIQQK 187
E V + D IK + K D+ +D + F+ D +LL ++ P+D + +K
Sbjct: 860 EDTVFSQEDLIKFLLPVWEKLDKSEDAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKK 919
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLL 239
L +Y + F DI L++ NA + ++NS+ ++ +L E+F S + ++
Sbjct: 920 LYAGQYQNAGQFCDDIWLMLDNAWLYNRKNSKVYKYGLKLSEMFVSEMDPVM 971
>sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2
Length = 1362
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALS 553
+ PDYY++I+ P+DM I +L N Y + E + DF MF N YN+P I A +
Sbjct: 93 NLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEA 152
Query: 554 LQRIVLQTKMHLREDEDSV 572
L+++ LQ L +E +
Sbjct: 153 LEKLFLQKINELPTEETEI 171
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY ++I+ P+DM I SKL +Y E AD MF N KYN PD + A LQ
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 557 I 557
+
Sbjct: 449 V 449
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+YY +I P+D+ TI +R+++ Y + + +D M N +N+PG I A+AL+
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 370 KL 371
KL
Sbjct: 155 KL 156
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRD---AQELMEL 230
++ +P+D I+ KL+ EY D +F AD+ L+ N YK N +H A++L ++
Sbjct: 393 IIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNC---YKYNPPDHEVVAMARKLQDV 449
Query: 231 F 231
F
Sbjct: 450 F 450
Score = 33.9 bits (76), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
+Y D+I P+D+ TI +++ +Y + D+ LM N +N P ++ A+ L+
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQ 447
>sp|Q80UV9|TAF1_MOUSE Transcription initiation factor TFIID subunit 1 OS=Mus musculus
GN=Taf1 PE=2 SV=2
Length = 1891
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++T P+D +++ ++ Y +F+ +EL+VKN+ T+ N +H Q +
Sbjct: 1441 IITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATY---NGPKHSLTQISQSMLDL 1497
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTS---TD 290
KL + +K + + +D+Q + + ++T
Sbjct: 1498 CDEKLKEKEDKLARLEKAI--------------NPLLDDDDQVAFSFILDNIVTQKMMAV 1543
Query: 291 ADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKN 350
DS P H +KK P+YY VI P+DL TI + I KY S D+ L+ N
Sbjct: 1544 PDSWPFHHPV----NKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILAN 1599
Query: 351 ACTFNEPGSQIYKDAKAL 368
+ +N P SQ K A+ +
Sbjct: 1600 SVKYNGPESQYTKTAQEI 1617
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 97/251 (38%), Gaps = 63/251 (25%)
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKK 370
+YY +I P+DL+T+ ++ Y S + + L L+ KN+ T+N P + + ++++
Sbjct: 1437 DYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLD 1496
Query: 371 LVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAALESEDDESEDDEEIDQEDPN 430
L E+++ K + + AI L+ +D
Sbjct: 1497 LC-----------------DEKLKEKEDKLARLEKAINPLLDDDDQ-------------- 1525
Query: 431 SPLWQVYDAIRNAKTQGVIFFFFGVTAASLQKMRILYNTIKETCEPKTGRQLSHIFQRLP 490
+ F F + QKM + + S F
Sbjct: 1526 ------------------VAFSFILDNIVTQKMMAVPD--------------SWPFHHPV 1553
Query: 491 SRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKD 550
++ PDYY+VI P+D+E I + ++Y+ + + D + N+ KYN P+S K
Sbjct: 1554 NKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKT 1613
Query: 551 ALSLQRIVLQT 561
A + + QT
Sbjct: 1614 AQEIVNVCHQT 1624
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DYY++I +P+D++ + +R Y +E + N+ YN P + + + S+
Sbjct: 1437 DYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLD 1496
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELL 583
+ + L+E ED + + A+ LL
Sbjct: 1497 LCDE---KLKEKEDKLARLEKAINPLL 1520
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 496 PDYYEVIRKPVDMEMIASKLR--YNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALS 553
PDYY++I+ P+D+ I +L+ Y+ Y ++ VADF +F N ++NEPDS + +
Sbjct: 933 PDYYKIIKNPMDLSTIKKRLQEDYSMYSKPEDFVADFRLIFQNCAEFNEPDSEVANAGIK 992
Query: 554 LQ 555
L+
Sbjct: 993 LE 994
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 310 PEYYDVIDVPIDLRTIARRIQD--GKYASLGDMEKDLILMTKNACTFNEPGSQI 361
P+YY +I P+DL TI +R+Q+ Y+ D D L+ +N FNEP S++
Sbjct: 933 PDYYKIIKNPMDLSTIKKRLQEDYSMYSKPEDFVADFRLIFQNCAEFNEPDSEV 986
>sp|P21675|TAF1_HUMAN Transcription initiation factor TFIID subunit 1 OS=Homo sapiens
GN=TAF1 PE=1 SV=2
Length = 1872
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++T P+D +++ ++ Y +F+ +EL+VKN+ T+ N +H Q +
Sbjct: 1420 IITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATY---NGPKHSLTQISQSMLDL 1476
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTS---TD 290
KL + +K + + +D+Q + + ++T
Sbjct: 1477 CDEKLKEKEDKLARLEKAI--------------NPLLDDDDQVAFSFILDNIVTQKMMAV 1522
Query: 291 ADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKN 350
DS P H +KK P+YY VI P+DL TI + I KY S D+ L+ N
Sbjct: 1523 PDSWPFHHPV----NKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILAN 1578
Query: 351 ACTFNEPGSQIYKDAKAL 368
+ +N P SQ K A+ +
Sbjct: 1579 SVKYNGPESQYTKTAQEI 1596
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 97/251 (38%), Gaps = 63/251 (25%)
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKK 370
+YY +I P+DL+T+ ++ Y S + + L L+ KN+ T+N P + + ++++
Sbjct: 1416 DYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLD 1475
Query: 371 LVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAALESEDDESEDDEEIDQEDPN 430
L E+++ K + + AI L+ +D
Sbjct: 1476 LC-----------------DEKLKEKEDKLARLEKAINPLLDDDDQ-------------- 1504
Query: 431 SPLWQVYDAIRNAKTQGVIFFFFGVTAASLQKMRILYNTIKETCEPKTGRQLSHIFQRLP 490
+ F F + QKM + + S F
Sbjct: 1505 ------------------VAFSFILDNIVTQKMMAVPD--------------SWPFHHPV 1532
Query: 491 SRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKD 550
++ PDYY+VI P+D+E I + ++Y+ + + D + N+ KYN P+S K
Sbjct: 1533 NKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKT 1592
Query: 551 ALSLQRIVLQT 561
A + + QT
Sbjct: 1593 AQEIVNVCYQT 1603
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DYY++I +P+D++ + +R Y +E + N+ YN P + + + S+
Sbjct: 1416 DYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLD 1475
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELL 583
+ + L+E ED + + A+ LL
Sbjct: 1476 LCDE---KLKEKEDKLARLEKAINPLL 1499
>sp|P51123|TAF1_DROME Transcription initiation factor TFIID subunit 1 OS=Drosophila
melanogaster GN=Taf1 PE=1 SV=3
Length = 2129
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY V+ KP+D++ + +R +Y + + D Q+ DN+ YN P S L+ Q
Sbjct: 1505 PDYYRVVTKPMDLQTMREYIRQRRYTSREMFLEDLKQIVDNSLIYNGPQSAY---TLAAQ 1561
Query: 556 RIVLQTKMHLREDEDSVPDVPAAVQEL--------LTSLFTSVYNHQKQCLGSFHVLNVD 607
R+ L E ED + + A+ L L+ +F +++ KQ S+ L
Sbjct: 1562 RMFSSCFELLAEREDKLMRLEKAINPLLDDDDQVALSFIFDKLHSQIKQLPESWPFLKPV 1621
Query: 608 NKPLKRRLYTLCKCLMD 624
NK + YT+ K MD
Sbjct: 1622 NKKQVKDYYTVIKRPMD 1638
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 296 LHEVFQLLP---------SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLIL 346
LH + LP +KK+ +YY VI P+DL TI + I+ +Y S + D+ L
Sbjct: 1604 LHSQIKQLPESWPFLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYHSRAEYLADIEL 1663
Query: 347 MTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
+ N +N ++ K +K + + QT+ +E +
Sbjct: 1664 IATNCEQYNGSDTRYTKFSKKILEYAQTQLIEFSE 1698
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYK 549
DYY VI++P+D+E I + ++Y E +AD + N +YN D+ K
Sbjct: 1628 DYYTVIKRPMDLETIGKNIEAHRYHSRAEYLADIELIATNCEQYNGSDTRYTK 1680
Score = 37.0 bits (84), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 302 LLP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGS 359
L P S K+ P+YY V+ P+DL+T+ I+ +Y S +DL + N+ +N P S
Sbjct: 1496 LFPVSAKKVPDYYRVVTKPMDLQTMREYIRQRRYTSREMFLEDLKQIVDNSLIYNGPQS 1554
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 125 PFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVT 176
PF++ K+Q Y+ V+ P+D I + ++ Y +++ ADIEL+
Sbjct: 1616 PFLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYHSRAEYLADIELIATN 1667
>sp|Q9JHD1|KAT2B_MOUSE Histone acetyltransferase KAT2B OS=Mus musculus GN=Kat2b PE=1 SV=2
Length = 813
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LY+T+K + + F R + P YYEVIR P+D++ ++ +LR Y
Sbjct: 709 LYSTLKNILQQVKNHPNAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLRNRYYVSKKL 768
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVL 559
+AD ++F N +YN P+S YK A L++
Sbjct: 769 FMADLQRVFTNCKEYNPPESEYYKCASILEKFFF 802
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P YY+VI P+DL+T++ R+++ Y S DL + N +N P S+ YK A L+
Sbjct: 739 PGYYEVIRFPMDLKTMSERLRNRYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCASILE 798
Query: 370 KLVQTK 375
K +K
Sbjct: 799 KFFFSK 804
Score = 37.4 bits (85), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 83 TSETPTMQTRPKRKKIDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVV 142
T P+ + + K K DP + ++++ K A PF+ K+ + P Y+EV+
Sbjct: 690 TGWKPSGKEKSKEPK-DPEQLYSTLKNILQQVKNHPNAW---PFMEPVKRTEAPGYYEVI 745
Query: 143 TNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTN 177
P+D + ++L+ Y F AD++ V TN
Sbjct: 746 RFPMDLKTMSERLRNRYYVSKKLFMADLQ-RVFTN 779
>sp|Q338B9|GCN5_ORYSJ Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica
GN=GCN5 PE=2 SV=1
Length = 511
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEM-VADFIQMFDNACKYNEPDSHIYKDAL 552
D PDYY++I+ P+D++ ++ ++ QY EM VAD +MF NA YN PD+ YK A
Sbjct: 431 DVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSPDTIYYKCAS 490
Query: 553 SLQ 555
L+
Sbjct: 491 RLE 493
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGK-YASLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
P+YYD+I PIDL+T+++R++ + Y +L D+ M NA T+N P + YK A L
Sbjct: 433 PDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSPDTIYYKCASRL 492
Query: 369 KKLVQTK 375
+ K
Sbjct: 493 ESFFSNK 499
>sp|Q9H0E9|BRD8_HUMAN Bromodomain-containing protein 8 OS=Homo sapiens GN=BRD8 PE=1 SV=2
Length = 1235
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 98/481 (20%), Positives = 186/481 (38%), Gaps = 76/481 (15%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPI-------DFIKIQQKL 188
P YH +V P+D I++ ++ ++FQ DI +L+ N + D + ++
Sbjct: 742 PGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDI-MLMFQNAVMYNSSDHDVYHMAVEM 800
Query: 189 KTDEYDDLSDFQADIELLVK------NAKTFYKRNSQEHRDAQELMELFHSTRNKLLNP- 241
+ D + + F A +L+++ +AK+ R+S +DA E + + LL+
Sbjct: 801 QRDVLEQIQQFLA-TQLIMQTSESGISAKSLRGRDSTRKQDASEKDSVPMGSPAFLLSLF 859
Query: 242 QSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQ 301
HE + SE + DS + N C LF++ +S D D E
Sbjct: 860 MGHEW--------VWLDSEQDHPNDSELS-----NDCRSLFSSWDSSLDLDVGNWRETED 906
Query: 302 LL------PSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNAC-TF 354
S +R P V D + A R + +L ++ + + C +
Sbjct: 907 PEAEELEESSPEREPSELLVGDGGSEESQEAAR--KASHQNLLHFLSEVAYLMEPLCISS 964
Query: 355 NE------PGSQIYKDAKALKKLVQTKKMEIEQGKFT----------PAGKSERIRSKRI 398
NE P S ++ + +K +++ E + + P G++ + +
Sbjct: 965 NESSEGCCPPSGTRQEGREIKASEGERELCRETEELSAKGDPLVAEKPLGENGK---PEV 1021
Query: 399 RGGQSLSAITAALESEDDESEDDEEIDQEDPNS----------PLWQVYDAIRNAKTQGV 448
S+ L +E +E E +E ED P + DA +T V
Sbjct: 1022 ASAPSVICTVQGLLTESEEGEAQQESKGEDQGEVYVSEMEDQPPSGECDDAFNIKETPLV 1081
Query: 449 IFFFFGVTAASL---------QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYY 499
F T++ L Q + T+ + + S F + S P Y
Sbjct: 1082 DTLFSHATSSKLTDLSQDDPVQDHLLFKKTLLPVWKMIASHRFSSPFLKPVSERQAPGYK 1141
Query: 500 EVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVL 559
+V+++P+D+ + L + + + + D + MF NA YN+ D H+Y A+ +++ VL
Sbjct: 1142 DVVKRPMDLTSLKRNLSKGRIRTMAQFLRDLMLMFQNAVMYNDSDHHVYHMAVEMRQEVL 1201
Query: 560 Q 560
+
Sbjct: 1202 E 1202
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 268 SICTEDEQN-QCEDLFN-AVMTSTDADSRPLHEVFQLLP-SKKRYPEYYDVIDVPIDLRT 324
S+C+ED++ Q + ++ A+M A + + L P + P Y+ ++ P+DL T
Sbjct: 697 SVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSIVQRPMDLST 756
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKF 384
I + I++G S + ++D++LM +NA +N +Y A +++ V + + +
Sbjct: 757 IKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLATQL 816
Query: 385 TPAGKSERIRSKRIRG 400
I +K +RG
Sbjct: 817 IMQTSESGISAKSLRG 832
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%)
Query: 459 SLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYN 518
++Q +I I + +++F + + P Y+ ++++P+D+ I +
Sbjct: 705 AIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENG 764
Query: 519 QYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQ 560
E D + MF NA YN D +Y A+ +QR VL+
Sbjct: 765 LIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLE 806
Score = 33.5 bits (75), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 125 PFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
PF++ +RQ P Y +VV P+D +++ L ++ F D+ L+
Sbjct: 1127 PFLKPVSERQAPGYKDVVKRPMDLTSLKRNLSKGRIRTMAQFLRDLMLM 1175
>sp|Q7JJ13|BRD2_MOUSE Bromodomain-containing protein 2 OS=Mus musculus GN=Brd2 PE=1 SV=1
Length = 798
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I++P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 556 RIVLQTKMHLREDE 569
+I LQ + ++E
Sbjct: 170 KIFLQKVASMPQEE 183
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ Y E AD MF N KYN PD + A LQ
Sbjct: 384 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 443
Query: 557 I 557
+
Sbjct: 444 V 444
Score = 40.8 bits (94), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ +I P+D+ TI RR+++ Y + + +D M N +N+P I A+ L+
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 370 KLVQTKKMEIEQ 381
K+ K + Q
Sbjct: 170 KIFLQKVASMPQ 181
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
+Y+D+I P+DL T+ R++++ Y + D+ LM N +N P + A+ L+
Sbjct: 384 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 442
Score = 36.2 bits (82), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 25/36 (69%)
Query: 138 YHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
YH+++ +P+D +++K++ +Y D +F AD+ L+
Sbjct: 385 YHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLM 420
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEH 221
++ +P+D +++K++ +Y D +F AD+ L+ N YK N +H
Sbjct: 388 IIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNC---YKYNPPDH 432
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 244,115,795
Number of Sequences: 539616
Number of extensions: 10472229
Number of successful extensions: 45222
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 43935
Number of HSP's gapped (non-prelim): 1220
length of query: 653
length of database: 191,569,459
effective HSP length: 124
effective length of query: 529
effective length of database: 124,657,075
effective search space: 65943592675
effective search space used: 65943592675
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)