Your job contains 1 sequence.
>psy15468
LGLATAGLVTEEEEAEGPAPLELAVPGVDRLDIICIMVELTYSGVMAGDCATLPPKRFIM
GKRRRASSLTRSVDDDDDSSSHTSETPTMQTRPKRKKIDPSDAMQQIYDVIRNFKKEDGA
LLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPID
FIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLN
PQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVF
QLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ
IYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAALESEDDESED
DEEIDQEDPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQKMRILYNTIKETCEPKTGR
QLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKY
NEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQELLTSLFTSVYNHQKQCLGS
FHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVH
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15468
(653 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039227 - symbol:polybromo "polybromo" species:722... 584 2.4e-98 2
RGD|1565549 - symbol:Pbrm1 "polybromo 1" species:10116 "R... 640 1.0e-81 2
UNIPROTKB|E2RRR3 - symbol:PBRM1 "Uncharacterized protein"... 626 3.5e-80 2
UNIPROTKB|E2RRL7 - symbol:PBRM1 "Uncharacterized protein"... 626 4.0e-80 2
UNIPROTKB|H0Y5B5 - symbol:PBRM1 "Protein polybromo-1" spe... 638 4.0e-80 2
UNIPROTKB|E7EVG2 - symbol:PBRM1 "Protein polybromo-1" spe... 621 7.3e-80 2
MGI|MGI:1923998 - symbol:Pbrm1 "polybromo 1" species:1009... 621 1.2e-79 2
UNIPROTKB|Q86U86 - symbol:PBRM1 "Protein polybromo-1" spe... 621 1.4e-79 2
UNIPROTKB|E1BNH8 - symbol:E1BNH8 "Uncharacterized protein... 619 2.1e-79 2
ZFIN|ZDB-GENE-010501-3 - symbol:pbrm1l "polybromo 1, like... 629 1.7e-78 2
UNIPROTKB|F1NLL8 - symbol:PBRM1 "Protein polybromo-1" spe... 647 4.6e-62 1
UNIPROTKB|Q90941 - symbol:PBRM1 "Protein polybromo-1" spe... 647 4.6e-62 1
WB|WBGene00007042 - symbol:pbrm-1 species:6239 "Caenorhab... 334 2.1e-51 2
UNIPROTKB|C9JPI5 - symbol:PBRM1 "Protein polybromo-1" spe... 259 1.4e-26 2
POMBASE|SPBC1734.15 - symbol:rsc4 "RSC complex subunit Rs... 262 1.8e-24 2
ASPGD|ASPL0000036706 - symbol:AN3448 species:162425 "Emer... 181 2.3e-22 2
UNIPROTKB|C9JQF1 - symbol:PBRM1 "Protein polybromo-1" spe... 224 1.2e-17 1
UNIPROTKB|C9J053 - symbol:PBRM1 "Protein polybromo-1" spe... 220 3.1e-17 1
UNIPROTKB|B1ALG2 - symbol:SMARCA2 "Probable global transc... 217 6.6e-17 1
UNIPROTKB|F6XDY1 - symbol:SMARCA2 "Probable global transc... 217 6.6e-17 1
UNIPROTKB|E1C2F7 - symbol:E1C2F7 "Uncharacterized protein... 229 4.1e-15 1
UNIPROTKB|A5PKK5 - symbol:SMARCA2 "SMARCA2 protein" speci... 229 4.2e-15 1
UNIPROTKB|E2RKP4 - symbol:SMARCA2 "Uncharacterized protei... 229 4.2e-15 1
UNIPROTKB|F1SJG5 - symbol:SMARCA2 "Uncharacterized protei... 229 4.2e-15 1
MGI|MGI:99603 - symbol:Smarca2 "SWI/SNF related, matrix a... 227 7.0e-15 1
UNIPROTKB|F1S594 - symbol:LOC100622433 "Uncharacterized p... 223 8.4e-15 1
ZFIN|ZDB-GENE-030605-1 - symbol:smarca4 "SWI/SNF related,... 223 2.0e-14 1
MGI|MGI:88192 - symbol:Smarca4 "SWI/SNF related, matrix a... 228 8.4e-14 2
RGD|621728 - symbol:Smarca4 "SWI/SNF related, matrix asso... 228 8.4e-14 2
UNIPROTKB|J9P5P2 - symbol:SMARCA2 "Uncharacterized protei... 217 8.5e-14 1
SGD|S000003288 - symbol:RSC1 "Component of the RSC chroma... 145 8.5e-14 2
UNIPROTKB|P51531 - symbol:SMARCA2 "Probable global transc... 217 8.6e-14 1
RGD|1302988 - symbol:Smarca2 "SWI/SNF related, matrix ass... 217 8.6e-14 1
UNIPROTKB|E9PTG1 - symbol:Smarca2 "Protein Smarca2" speci... 217 8.6e-14 1
SGD|S000004349 - symbol:RSC2 "Component of the RSC chroma... 154 1.3e-13 2
UNIPROTKB|K7GT64 - symbol:LOC100622433 "Uncharacterized p... 223 1.3e-13 2
UNIPROTKB|P51532 - symbol:SMARCA4 "Transcription activato... 223 1.9e-13 2
UNIPROTKB|Q9HBD4 - symbol:SMARCA4 "SMARCA4 isoform 2" spe... 223 2.0e-13 2
ZFIN|ZDB-GENE-030131-267 - symbol:brd4 "bromodomain conta... 138 2.0e-13 2
ZFIN|ZDB-GENE-030131-5964 - symbol:smarca2 "SWI/SNF relat... 213 2.3e-13 1
UNIPROTKB|F1MJ46 - symbol:SMARCA4 "Transcription activato... 223 2.9e-13 2
UNIPROTKB|A7Z019 - symbol:SMARCA4 "Transcription activato... 223 2.9e-13 2
UNIPROTKB|G3V790 - symbol:Smarca4 "SWI/SNF related, matri... 223 3.0e-13 2
UNIPROTKB|E2RJ89 - symbol:SMARCA4 "Uncharacterized protei... 223 3.0e-13 2
UNIPROTKB|F1M6Y4 - symbol:Smarca4 "Transcription activato... 223 3.0e-13 2
CGD|CAL0006080 - symbol:orf19.2964 species:5476 "Candida ... 141 5.8e-13 3
POMBASE|SPBC4B4.03 - symbol:rsc1 "RSC complex subunit Rsc... 184 1.0e-12 2
UNIPROTKB|C9JJU3 - symbol:BRDT "Bromodomain testis-specif... 141 1.5e-12 2
RGD|1306678 - symbol:Brdt "bromodomain, testis-specific" ... 140 1.7e-12 2
UNIPROTKB|H9L005 - symbol:LOC100859056 "Uncharacterized p... 137 1.7e-12 2
POMBASE|SPCC1450.02 - symbol:bdf1 "Swr1 complex bromodoma... 158 3.7e-12 2
FB|FBgn0000212 - symbol:brm "brahma" species:7227 "Drosop... 202 3.8e-12 1
UNIPROTKB|H9L2H3 - symbol:LOC100859056 "Uncharacterized p... 137 4.8e-12 2
POMBASE|SPAC1250.01 - symbol:snf21 "ATP-dependent DNA hel... 209 7.5e-12 2
RGD|1307282 - symbol:Brd4 "bromodomain containing 4" spec... 136 8.9e-12 2
MGI|MGI:1891374 - symbol:Brdt "bromodomain, testis-specif... 133 9.6e-12 2
UNIPROTKB|Q58F21 - symbol:BRDT "Bromodomain testis-specif... 141 1.1e-11 2
UNIPROTKB|E1BCG9 - symbol:Bt.104862 "Uncharacterized prot... 132 1.2e-11 2
UNIPROTKB|H0YGM3 - symbol:SMARCA4 "Transcription activato... 189 1.2e-11 1
UNIPROTKB|Q4R8Y1 - symbol:BRDT "Bromodomain testis-specif... 138 2.9e-11 2
ZFIN|ZDB-GENE-990415-248 - symbol:brd2a "bromodomain-cont... 149 3.1e-11 2
UNIPROTKB|Q9H0E9 - symbol:BRD8 "Bromodomain-containing pr... 134 3.2e-11 3
POMBASE|SPCC1620.14c - symbol:snf22 "ATP-dependent DNA he... 193 3.6e-11 1
SGD|S000001716 - symbol:RSC4 "Component of the RSC chroma... 185 4.0e-11 2
UNIPROTKB|E1BNS3 - symbol:BRD4 "Uncharacterized protein" ... 136 6.1e-11 2
UNIPROTKB|I3L6E5 - symbol:BRD4 "Uncharacterized protein" ... 136 6.2e-11 2
UNIPROTKB|O60885 - symbol:BRD4 "Bromodomain-containing pr... 136 7.7e-11 2
MGI|MGI:1888520 - symbol:Brd4 "bromodomain containing 4" ... 136 8.2e-11 2
CGD|CAL0004406 - symbol:orf19.2041 species:5476 "Candida ... 150 1.2e-10 2
UNIPROTKB|F1MMU3 - symbol:BRD3 "Uncharacterized protein" ... 135 1.2e-10 2
RGD|1308925 - symbol:Brd3 "bromodomain containing 3" spec... 135 1.3e-10 2
WB|WBGene00004204 - symbol:swsn-4 species:6239 "Caenorhab... 185 2.3e-10 1
UNIPROTKB|F1S033 - symbol:BRD3 "Uncharacterized protein" ... 135 2.6e-10 2
ASPGD|ASPL0000050693 - symbol:AN1984 species:162425 "Emer... 120 3.3e-10 2
MGI|MGI:1914632 - symbol:Brd3 "bromodomain containing 3" ... 135 3.4e-10 2
CGD|CAL0003962 - symbol:orf19.239 species:5476 "Candida a... 182 4.2e-10 1
SGD|S000002228 - symbol:BDF2 "Protein involved in transcr... 177 5.4e-10 1
UNIPROTKB|Q15059 - symbol:BRD3 "Bromodomain-containing pr... 135 6.9e-10 2
ZFIN|ZDB-GENE-030131-5928 - symbol:brdt "bromodomain, tes... 128 2.9e-09 2
UNIPROTKB|E1C8U8 - symbol:BRD3 "Uncharacterized protein" ... 143 3.6e-09 2
FB|FBgn0004656 - symbol:fs(1)h "female sterile (1) homeot... 131 7.0e-09 2
UNIPROTKB|C9JD82 - symbol:BRDT "Bromodomain testis-specif... 141 1.0e-08 1
POMBASE|SPAC1952.05 - symbol:gcn5 "SAGA complex histone a... 163 1.0e-08 1
UNIPROTKB|B0V072 - symbol:BRD2 "Bromodomain-containing pr... 133 1.3e-08 2
UNIPROTKB|B0V073 - symbol:BRD2 "Bromodomain-containing pr... 133 1.5e-08 2
POMBASE|SPAC631.02 - symbol:nrc1 "bromodomain protein (pr... 167 1.7e-08 2
MGI|MGI:99495 - symbol:Brd2 "bromodomain containing 2" sp... 133 1.9e-08 2
RGD|1303324 - symbol:Brd2 "bromodomain containing 2" spec... 133 1.9e-08 2
UNIPROTKB|Q32S26 - symbol:BRD2 "Bromodomain-containing pr... 133 1.9e-08 2
UNIPROTKB|Q5TJG6 - symbol:BRD2 "Bromodomain-containing pr... 133 1.9e-08 2
UNIPROTKB|A5D9K6 - symbol:BRD2 "Uncharacterized protein" ... 133 1.9e-08 2
CGD|CAL0005444 - symbol:SNF2 species:5476 "Candida albica... 171 2.0e-08 2
UNIPROTKB|Q5AM49 - symbol:SNF2 "Putative uncharacterized ... 171 2.0e-08 2
SGD|S000004391 - symbol:BDF1 "Protein involved in transcr... 163 2.0e-08 1
UNIPROTKB|P25440 - symbol:BRD2 "Bromodomain-containing pr... 133 2.5e-08 2
UNIPROTKB|C9J1F7 - symbol:BRDT "Bromodomain testis-specif... 137 2.7e-08 1
SGD|S000005816 - symbol:SNF2 "Catalytic subunit of the SW... 162 4.4e-08 2
UNIPROTKB|F7DRV9 - symbol:brdt "Bromodomain testis-specif... 129 7.3e-08 2
UNIPROTKB|C9JDL5 - symbol:BRDT "Bromodomain testis-specif... 141 8.1e-08 1
UNIPROTKB|P21675 - symbol:TAF1 "Transcription initiation ... 128 1.0e-07 2
WARNING: Descriptions of 101 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0039227 [details] [associations]
symbol:polybromo "polybromo" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0031936 "negative regulation of chromatin
silencing" evidence=IGI] [GO:0007480 "imaginal disc-derived leg
morphogenesis" evidence=IGI] [GO:0007306 "eggshell chorion
assembly" evidence=IMP] [GO:0007305 "vitelline membrane formation
involved in chorion-containing eggshell formation" evidence=IMP]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
InterPro:IPR015880 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00355
SMART:SM00439 Pfam:PF00505 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0031936 GO:GO:0005700 GO:GO:0007480 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007306
GO:GO:0007305 HSSP:Q03330 EMBL:BT010048 ProteinModelPortal:Q7YU13
SMR:Q7YU13 STRING:Q7YU13 PRIDE:Q7YU13 FlyBase:FBgn0039227
InParanoid:Q7YU13 OrthoDB:EOG400002 ArrayExpress:Q7YU13 Bgee:Q7YU13
Uniprot:Q7YU13
Length = 1654
Score = 584 (210.6 bits), Expect = 2.4e-98, Sum P(2) = 2.4e-98
Identities = 132/276 (47%), Positives = 172/276 (62%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV NPID +K+QQKLKTD YDDL D AD+ELL+ NAK FY S EH+DA L + HS
Sbjct: 89 VVVNPIDLLKVQQKLKTDSYDDLDDLMADLELLIGNAKAFYIPGSSEHQDAVSLWQHIHS 148
Query: 234 TRNKLLNPQS---HEGTSQKRSMDFM-MASETEDSRDSSICTEDEQNQCEDLFNAVMTST 289
R +++ E +++ S M S TE D + T+DE NQ E+LF +VMT+T
Sbjct: 149 QRQRIMEANGLAEEEPRARRMSRQVRRMTSSTEPGGDGA--TDDEYNQYEELFASVMTAT 206
Query: 290 D-ADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMT 348
D R +H +FQLLPSKK YP+YYDVI+ PIDLR IA +IQ Y+SL +ME+DL+ MT
Sbjct: 207 DPVGDRLMHRMFQLLPSKKIYPDYYDVIEHPIDLRLIATKIQMNAYSSLAEMERDLLQMT 266
Query: 349 KNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLS-AI 407
KNAC FNEPGSQIYKDAK+LK++ +++E+E GK GK +KR++ SLS A
Sbjct: 267 KNACLFNEPGSQIYKDAKSLKRIFTQRRIELEMGK----GKL----AKRVK---SLSSAA 315
Query: 408 TAALXXXXXXXXXXXXXXXXXPNSPLWQVYDAIRNA 443
AAL P+W ++D + NA
Sbjct: 316 IAALKEEVDSSDDEETSKKG--EGPMWALFDHLYNA 349
Score = 439 (159.6 bits), Expect = 2.4e-98, Sum P(2) = 2.4e-98
Identities = 80/141 (56%), Positives = 106/141 (75%)
Query: 456 TAASLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKL 515
TA +++ Y T+KE EPK RQLS IF +LPS+ +YPDYY++IR+P+DM+ IA KL
Sbjct: 638 TAVITERLWQFYETVKEYQEPKGKRQLSLIFTKLPSKSEYPDYYDIIREPIDMDRIAQKL 697
Query: 516 RYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDV 575
+ Y+ LD++ ADF+ M +NACKYNEPDS IYKDAL LQ++ LQ K LR + DS+PDV
Sbjct: 698 KQGAYDTLDDLAADFLLMLENACKYNEPDSQIYKDALVLQQLTLQLKQQLRTERDSLPDV 757
Query: 576 PAAVQELLTSLFTSVYNHQKQ 596
P AVQEL +LFT++YNHQ +
Sbjct: 758 PLAVQELFLTLFTTIYNHQDE 778
Score = 318 (117.0 bits), Expect = 6.8e-90, Sum P(3) = 6.8e-90
Identities = 54/85 (63%), Positives = 72/85 (84%)
Query: 90 QTRPKRKKIDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFI 149
Q+ K++++DP++ QQ+YD IRN KKEDG++LCD FIR+PK+RQEPSY++VV NPID +
Sbjct: 38 QSARKKRRLDPTELCQQLYDSIRNIKKEDGSMLCDTFIRVPKRRQEPSYYDVVVNPIDLL 97
Query: 150 KIQQKLKTDEYDDLSDFQADIELLV 174
K+QQKLKTD YDDL D AD+ELL+
Sbjct: 98 KVQQKLKTDSYDDLDDLMADLELLI 122
Score = 276 (102.2 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 68/208 (32%), Positives = 108/208 (51%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ NPID I+ ++TD Y + D +D L+ N + + + S + DA ++E +
Sbjct: 552 IIQNPIDMNTIEHNIRTDRYAAVEDVVSDYRLMFSNCRQYNEEGSNIYEDAN-ILE--RA 608
Query: 234 TRNKLLN-PQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDAD 292
KL P EG K+S S+ +++ TE + + V +
Sbjct: 609 LNEKLKEFPGLTEG---KKSQQ--KYSKVGRKLKTAVITE----RLWQFYETVKEYQEPK 659
Query: 293 S-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNA 351
R L +F LPSK YP+YYD+I PID+ IA++++ G Y +L D+ D +LM +NA
Sbjct: 660 GKRQLSLIFTKLPSKSEYPDYYDIIREPIDMDRIAQKLKQGAYDTLDDLAADFLLMLENA 719
Query: 352 CTFNEPGSQIYKDAKALKKLVQTKKMEI 379
C +NEP SQIYKDA L++L K ++
Sbjct: 720 CKYNEPDSQIYKDALVLQQLTLQLKQQL 747
Score = 247 (92.0 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 76/272 (27%), Positives = 129/272 (47%)
Query: 128 RIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQK 187
++P +R P Y E++ PI +I KLK +Y ++SD AD+ L++ N +
Sbjct: 369 KLPVRRFHPEYFELIKRPISMSQIHTKLKKGDYANISDLTADLYLML-DNAKKAFPTSHR 427
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQEL-MELFH-STRNKLLNPQSHE 245
D L A LV+ ++ + + + DA+E+ E+F ST+ + P
Sbjct: 428 THKDALKMLKLMNAK---LVE--ESLEEGSDLDDEDAEEMDTEVFTVSTQPEKRKPGRPR 482
Query: 246 GTSQKRSMDFMMASETEDSRDSSICTEDE-QNQCEDLFNAVMTSTDADSRPLHEVFQLLP 304
S S + + + + I + + + ++ + + RP+ E+F P
Sbjct: 483 INSNSNSNASHTPNNSNSPKSNRIAINAAIKKKILSIQKYLVDYSLGNRRPI-EMFMEKP 541
Query: 305 SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKD 364
+K YP+YYD+I PID+ TI I+ +YA++ D+ D LM N +NE GS IY+D
Sbjct: 542 PRKIYPDYYDIIQNPIDMNTIEHNIRTDRYAAVEDVVSDYRLMFSNCRQYNEEGSNIYED 601
Query: 365 AKALKKLVQTKKMEIEQGKFTPAGKSERIRSK 396
A L++ + K E G T KS++ SK
Sbjct: 602 ANILERALNEKLKEFP-G-LTEGKKSQQKYSK 631
Score = 246 (91.7 bits), Expect = 5.3e-51, Sum P(3) = 5.3e-51
Identities = 48/112 (42%), Positives = 68/112 (60%)
Query: 454 GVTAASLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIAS 513
G T + L+ ++ +P R + +FQ LPS+ YPDYY+VI P+D+ +IA+
Sbjct: 186 GATDDEYNQYEELFASVMTATDPVGDRLMHRMFQLLPSKKIYPDYYDVIEHPIDLRLIAT 245
Query: 514 KLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHL 565
K++ N Y L EM D +QM NAC +NEP S IYKDA SL+RI Q ++ L
Sbjct: 246 KIQMNAYSSLAEMERDLLQMTKNACLFNEPGSQIYKDAKSLKRIFTQRRIEL 297
Score = 215 (80.7 bits), Expect = 6.8e-90, Sum P(3) = 6.8e-90
Identities = 64/222 (28%), Positives = 108/222 (48%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
V+ +PID I K++ + Y L++ + D+ + KNA F + SQ ++DA+ L +F
Sbjct: 233 VIEHPIDLRLIATKIQMNAYSSLAEMERDLLQMTKNACLFNEPGSQIYKDAKSLKRIFTQ 292
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMAS-----ETEDSRDSSICTEDEQNQC----EDLFNA 284
R +L + +G KR A+ E DS D ++ + + L+NA
Sbjct: 293 RRIEL---EMGKGKLAKRVKSLSSAAIAALKEEVDSSDDEETSKKGEGPMWALFDHLYNA 349
Query: 285 VMTSTD--ADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEK 342
TS PL LP ++ +PEY+++I PI + I +++ G YA++ D+
Sbjct: 350 PGTSEHPGVTGPPLGNSLWKLPVRRFHPEYFELIKRPISMSQIHTKLKKGDYANISDLTA 409
Query: 343 DLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKME--IEQG 382
DL LM NA + +KDA + KL+ K +E +E+G
Sbjct: 410 DLYLMLDNAKKAFPTSHRTHKDALKMLKLMNAKLVEESLEEG 451
Score = 177 (67.4 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 52/188 (27%), Positives = 91/188 (48%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LY++I+ + + G L F R+P R P YY+V+ P+D+ + KL+ + Y+ LD+
Sbjct: 55 LYDSIRNI-KKEDGSMLCDTFIRVPKRRQEPSYYDVVVNPIDLLKVQQKLKTDSYDDLDD 113
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQELLTS 585
++AD + NA + P S ++DA+SL + + + + E + P A + +
Sbjct: 114 LMADLELLIGNAKAFYIPGSSEHQDAVSLWQHIHSQRQRIMEANGLAEEEPRA-RRMSRQ 172
Query: 586 LFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPM-LMFMELPSAK 644
+ + + G+ D++ + L +M D G + M MF LPS K
Sbjct: 173 VRRMTSSTEPGGDGA-----TDDE--YNQYEELFASVMTATDPVGDRLMHRMFQLLPSKK 225
Query: 645 IYPEYYKV 652
IYP+YY V
Sbjct: 226 IYPDYYDV 233
Score = 171 (65.3 bits), Expect = 4.3e-70, Sum P(2) = 4.3e-70
Identities = 39/113 (34%), Positives = 64/113 (56%)
Query: 480 RQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACK 539
R+ +F P R YPDYY++I+ P+DM I +R ++Y ++++V+D+ MF N +
Sbjct: 531 RRPIEMFMEKPPRKIYPDYYDIIQNPIDMNTIEHNIRTDRYAAVEDVVSDYRLMFSNCRQ 590
Query: 540 YNEPDSHIYKDALSLQRIVLQTKMH----LREDEDSVPDVPAAVQELLTSLFT 588
YNE S+IY+DA L+R L K+ L E + S ++L T++ T
Sbjct: 591 YNEEGSNIYEDANILER-ALNEKLKEFPGLTEGKKSQQKYSKVGRKLKTAVIT 642
Score = 160 (61.4 bits), Expect = 8.0e-77, Sum P(3) = 8.0e-77
Identities = 42/125 (33%), Positives = 68/125 (54%)
Query: 466 LYNTIKETCEPK-TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLD 524
LYN + P TG L + +LP R +P+Y+E+I++P+ M I +KL+ Y ++
Sbjct: 346 LYNAPGTSEHPGVTGPPLGNSLWKLPVRRFHPEYFELIKRPISMSQIHTKLKKGDYANIS 405
Query: 525 EMVADFIQMFDNACKYNEPDSH-IYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQELL 583
++ AD M DNA K P SH +KDAL + +++ + +E S D A +E+
Sbjct: 406 DLTADLYLMLDNA-KKAFPTSHRTHKDALKMLKLMNAKLVEESLEEGSDLDDEDA-EEMD 463
Query: 584 TSLFT 588
T +FT
Sbjct: 464 TEVFT 468
Score = 158 (60.7 bits), Expect = 2.8e-53, Sum P(2) = 2.8e-53
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 273 DEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDG 332
D C+ L++++ D L + F +P +++ P YYDV+ PIDL + ++++
Sbjct: 47 DPTELCQQLYDSIRNIKKEDGSMLCDTFIRVPKRRQEPSYYDVVVNPIDLLKVQQKLKTD 106
Query: 333 KYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSER 392
Y L D+ DL L+ NA F PGS ++DA +L + + +++ I + A + R
Sbjct: 107 SYDDLDDLMADLELLIGNAKAFYIPGSSEHQDAVSLWQHIHSQRQRIMEANGL-AEEEPR 165
Query: 393 IR--SKRIR 399
R S+++R
Sbjct: 166 ARRMSRQVR 174
Score = 133 (51.9 bits), Expect = 0.00011, P = 0.00011
Identities = 41/154 (26%), Positives = 72/154 (46%)
Query: 101 SDAMQQIYDVIRNFKKEDGAL-LCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDE 159
++ + Q Y+ ++ +++ G L F ++P K + P Y++++ PID +I QKLK
Sbjct: 642 TERLWQFYETVKEYQEPKGKRQLSLIFTKLPSKSEYPDYYDIIREPIDMDRIAQKLKQGA 701
Query: 160 YDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQ 219
YD L D AD LL++ N + + ++ Y D Q L + +T +R+S
Sbjct: 702 YDTLDDLAADF-LLMLENACKYNEPDSQI----YKDALVLQQLTLQLKQQLRT--ERDSL 754
Query: 220 EHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSM 253
+ ELF + + N Q EG S+
Sbjct: 755 PDVPLA-VQELFLTLFTTIYNHQDEEGRCYSDSL 787
Score = 101 (40.6 bits), Expect = 8.0e-77, Sum P(3) = 8.0e-77
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 608 NKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKV 652
N +K+++ ++ K L+DY R+P+ MFME P KIYP+YY +
Sbjct: 509 NAAIKKKILSIQKYLVDY-SLGNRRPIEMFMEKPPRKIYPDYYDI 552
Score = 91 (37.1 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 126 FIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
F+ P ++ P Y++++ NPID I+ ++TD Y + D +D L+
Sbjct: 537 FMEKPPRKIYPDYYDIIQNPIDMNTIEHNIRTDRYAAVEDVVSDYRLM 584
Score = 81 (33.6 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 126 FIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADI 170
F +P K+ P Y++V+ +PID I K++ + Y L++ + D+
Sbjct: 218 FQLLPSKKIYPDYYDVIEHPIDLRLIATKIQMNAYSSLAEMERDL 262
Score = 78 (32.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 38/200 (19%), Positives = 78/200 (39%)
Query: 181 FIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLN 240
F K+ K + +Y D+ D++ + + K ++ + A L+ L ++ + +
Sbjct: 668 FTKLPSKSEYPDYYDIIREPIDMDRIAQKLKQG-AYDTLDDLAADFLLMLENACKYNEPD 726
Query: 241 PQSHEGTSQKRSMDFMMASETEDSRDSSICTE-DEQNQCEDLFNAVMTSTDADSRPLHEV 299
Q ++ + + + + RDS Q LF + D + R +
Sbjct: 727 SQIYKDALVLQQLTLQLKQQLRTERDSLPDVPLAVQELFLTLFTTIYNHQDEEGRCYSDS 786
Query: 300 FQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGS 359
LP E V + +DL + RR+ G Y L ++D+ + A + S
Sbjct: 787 LAELPEYDEIGEGPKVRGISLDL--VKRRLDKGAYKRLDVYQEDIFACLERARKLSRTDS 844
Query: 360 QIYKDAKALKKLVQTKKMEI 379
I++D+ L+ K+ E+
Sbjct: 845 DIFQDSIELQTYFIRKRDEL 864
Score = 41 (19.5 bits), Expect = 2.1e-56, Sum P(2) = 2.1e-56
Identities = 36/170 (21%), Positives = 72/170 (42%)
Query: 477 KTGRQLSH--IFQRLPSRHDYPDYYEVIRKPVDMEMIASKL-RYNQYEHLDEMVADFIQM 533
K GR+L I +RL ++ Y+ + + +I +KL ++Y +++ + I M
Sbjct: 631 KVGRKLKTAVITERLWQFYETVKEYQEPKGKRQLSLIFTKLPSKSEYPDYYDIIREPIDM 690
Query: 534 FDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQELLTSLFTSVYNH 593
A K + D + ++L+ E + + +Q+L L
Sbjct: 691 DRIAQKLKQGAYDTLDDLAADFLLMLENACKYNEPDSQIYKDALVLQQLTLQL------- 743
Query: 594 QKQCLGSFHVLNVDNKPLK-RRLY-TLCKCLMDYRDQDGRQPMLMFMELP 641
KQ L + ++ + PL + L+ TL + +++D++GR ELP
Sbjct: 744 -KQQLRTERD-SLPDVPLAVQELFLTLFTTIYNHQDEEGRCYSDSLAELP 791
Score = 41 (19.5 bits), Expect = 5.6e-41, Sum P(2) = 5.6e-41
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 429 PNSPLWQVYDAIRNAKTQ 446
P Q+YD+IRN K +
Sbjct: 48 PTELCQQLYDSIRNIKKE 65
Score = 37 (18.1 bits), Expect = 5.6e-56, Sum P(2) = 5.6e-56
Identities = 5/14 (35%), Positives = 11/14 (78%)
Query: 639 ELPSAKIYPEYYKV 652
+LP + +PEY+++
Sbjct: 369 KLPVRRFHPEYFEL 382
>RGD|1565549 [details] [associations]
symbol:Pbrm1 "polybromo 1" species:10116 "Rattus norvegicus"
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0001890 "placenta
development" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0007507 "heart development"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] InterPro:IPR009071 InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
Pfam:PF00505 RGD:1565549 GO:GO:0008285 GO:GO:0007507 GO:GO:0000776
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001890 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
OrthoDB:EOG41NTK5 GeneTree:ENSGT00390000003017 IPI:IPI00766567
Ensembl:ENSRNOT00000016581 UCSC:RGD:1565549 NextBio:655693
ArrayExpress:D3ZT52 Uniprot:D3ZT52
Length = 1704
Score = 640 (230.4 bits), Expect = 1.0e-81, Sum P(2) = 1.0e-81
Identities = 170/509 (33%), Positives = 267/509 (52%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV+ PID +KIQQKLK +EYDD++ AD +LL NAK +YK +S E++ A +L +L+
Sbjct: 87 VVSQPIDLMKIQQKLKMEEYDDINLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLR 146
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
TRN+ + Q E + D + + + + E L A++ +T+
Sbjct: 147 TRNEFV--QKGEADDEDDDED---GQDNQGTMADGSSPGYLKEILEQLLEAIVVATNPSG 201
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KNA T
Sbjct: 202 RLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKT 261
Query: 354 FNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAALXX 413
+NEPGSQ++KDA ++KK+ KK EIE + T KS S RIR +L+A A L
Sbjct: 262 YNEPGSQVFKDANSIKKIFYMKKAEIEHHEMT---KS----SLRIRTATNLAA--ARLTG 312
Query: 414 XXXXXXXXXXXXXXXPNSPLWQVYDAIRNAKTQGVIFFF-FG--------VTAASLQK-- 462
P S ++ A++ + + +G + AA ++
Sbjct: 313 PSHNKSSLDEERN--PTSKCYRNKRAVQGGRLSAITMALQYGSESEEDAALAAARYEEGE 370
Query: 463 ---------MRI------LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVD 507
M + LY+T++ +C G+ ++ F LPS+ YPDYY+ I+ P+
Sbjct: 371 SEAESITSFMDVSNPFHQLYDTVR-SCRNNQGQLIAEPFFHLPSKKKYPDYYQQIKMPIS 429
Query: 508 MEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLRE 567
++ I +KL+ +YE LD + D MF+NA +YN P+S IYK L LQ+++ K L
Sbjct: 430 LQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELAR 489
Query: 568 DEDSVPDVPAAVQELLTSLFTSVYN---HQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMD 624
+D + D + + + ++ H + LG L+ K+R+ L +++
Sbjct: 490 RDD-IEDGDSMISSATSDTGSAKRKRNTHDSEMLG-LRRLSSKKNIRKQRMKILFNVVLE 547
Query: 625 YRDQ-DGRQPMLMFMELPSAKIYPEYYKV 652
R+ GR+ +FM PS K YP+YYK+
Sbjct: 548 AREPGSGRRLCDLFMVKPSKKDYPDYYKI 576
Score = 362 (132.5 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 71/135 (52%), Positives = 96/135 (71%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
QK+ +Y +K + K GR+LS IF RLPSR + PDYY I+KP+DME I S + N+Y
Sbjct: 675 QKLNEVYEAVKNYTD-KRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKY 733
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VPDVPAAV 579
+ +D MV DF+ MF+NAC YNEP+S IYKDAL L +++L+T+ L DEDS VP+V +
Sbjct: 734 QDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLI 793
Query: 580 QELLTSLFTSVYNHQ 594
QEL+ +LF SV +HQ
Sbjct: 794 QELIHNLFVSVMSHQ 808
Score = 279 (103.3 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 71/214 (33%), Positives = 116/214 (54%)
Query: 178 PIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
PI +I+ KLK EY+ L + D+ L+ +NAK + NS ++ +L ++ + + +
Sbjct: 427 PISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKE 486
Query: 238 LLNPQSHE-GTSQKRSM--DFMMASETEDSRDSSIC----TEDEQN----QCEDLFNAVM 286
L E G S S D A ++ DS + ++N + + LFN V+
Sbjct: 487 LARRDDIEDGDSMISSATSDTGSAKRKRNTHDSEMLGLRRLSSKKNIRKQRMKILFNVVL 546
Query: 287 TSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
+ + S R L ++F + PSKK YP+YY +I P+DL+ I I++ KYA M +D+
Sbjct: 547 EAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMMEDMK 606
Query: 346 LMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
LM +NA +NE GSQ+Y DA L+KL++ K+ E+
Sbjct: 607 LMFRNARHYNEEGSQVYNDAHILEKLLKDKRKEL 640
Score = 269 (99.8 bits), Expect = 3.4e-42, Sum P(3) = 3.4e-42
Identities = 64/215 (29%), Positives = 106/215 (49%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+ ++ D+Y D++L+ +NA+ + + SQ + DA L +L
Sbjct: 576 IILEPMDLKIIEHNIRNDKYAGEEGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKD 635
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
R K L P + + S + S T +Q + +++ AV TD
Sbjct: 636 KR-KELGPLPDDDDMASPKLKLSRKSGVSPKK-SKYMTPMQQ-KLNEVYEAVKNYTDKRG 692
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R L +F LPS+ P+YY I P+D+ I + KY + M +D ++M NACT
Sbjct: 693 RRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACT 752
Query: 354 FNEPGSQIYKDAKALKK-LVQTKK-MEIEQGKFTP 386
+NEP S IYKDA L K L++T++ +E ++ P
Sbjct: 753 YNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVP 787
Score = 256 (95.2 bits), Expect = 3.8e-36, Sum P(2) = 3.8e-36
Identities = 62/191 (32%), Positives = 108/191 (56%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
Q+M+IL+N + E EP +GR+L +F PS+ DYPDYY++I +P+D+++I +R ++Y
Sbjct: 536 QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKY 595
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVP-AAV 579
+ M+ D MF NA YNE S +Y DA L+++ L+ K R++ +PD A
Sbjct: 596 AGEEGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKL-LKDK---RKELGPLPDDDDMAS 651
Query: 580 QELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFME 639
+L S + V + + + P++++L + + + +Y D+ GR+ +F+
Sbjct: 652 PKLKLSRKSGVSPKKSKYM----------TPMQQKLNEVYEAVKNYTDKRGRRLSAIFLR 701
Query: 640 LPSAKIYPEYY 650
LPS P+YY
Sbjct: 702 LPSRSELPDYY 712
Score = 225 (84.3 bits), Expect = 1.0e-81, Sum P(2) = 1.0e-81
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+DP ++Y+ IR++K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK
Sbjct: 44 VDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKM 103
Query: 158 DEYDDLSDFQADIELL 173
+EYDD++ AD +LL
Sbjct: 104 EEYDDINLLTADFQLL 119
Score = 210 (79.0 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 60/188 (31%), Positives = 94/188 (50%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNTI++ + + GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++
Sbjct: 53 LYNTIRDY-KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDINL 111
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMH-LREDEDSVPDVPAAVQELLT 584
+ ADF +F+NA Y +PDS YK A L + L+T+ +++ E D Q+
Sbjct: 112 LTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQD--- 168
Query: 585 SLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAK 644
N GS LK L L + ++ + GR +F +LPS
Sbjct: 169 -------NQGTMADGS------SPGYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKV 215
Query: 645 IYPEYYKV 652
YP+YY +
Sbjct: 216 QYPDYYAI 223
Score = 156 (60.0 bits), Expect = 6.9e-41, Sum P(2) = 6.9e-41
Identities = 37/120 (30%), Positives = 64/120 (53%)
Query: 265 RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRT 324
R SS+ T D C +L+N + D R L E+F P ++ P+YY+V+ PIDL
Sbjct: 37 RLSSLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMK 96
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL-VQTKKMEIEQGK 383
I ++++ +Y + + D L+ NA + +P S YK A L L ++T+ +++G+
Sbjct: 97 IQQKLKMEEYDDINLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGE 156
Score = 154 (59.3 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ Q+YD +R+ + G L+ +PF +P K++ P Y++ + PI +I+ KLK
Sbjct: 380 MDVSNPFHQLYDTVRSCRNNQGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKN 439
Query: 158 DEYDDLSDFQADIELL 173
EY+ L + D+ L+
Sbjct: 440 QEYETLDHLECDLNLM 455
Score = 115 (45.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 20/83 (24%), Positives = 44/83 (53%)
Query: 93 PKRKK-IDP-SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIK 150
PK+ K + P + ++Y+ ++N+ + G L F+R+P + + P Y+ + P+D K
Sbjct: 664 PKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEK 723
Query: 151 IQQKLKTDEYDDLSDFQADIELL 173
I+ + ++Y D+ D ++
Sbjct: 724 IRSHMMANKYQDIDSMVEDFVMM 746
Score = 103 (41.3 bits), Expect = 7.2e-60, Sum P(3) = 7.2e-60
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
+ ++Q+ + I G L+ + F ++P K Q P Y+ ++ PID I Q+++ Y
Sbjct: 184 EILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYK 243
Query: 162 DLSDFQADIELL 173
+ DI+LL
Sbjct: 244 SIHAMAKDIDLL 255
Score = 99 (39.9 bits), Expect = 6.7e-35, Sum P(2) = 6.7e-35
Identities = 21/83 (25%), Positives = 42/83 (50%)
Query: 92 RPKRKKIDPSDAMQQIYDVIRNFKKE-DGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIK 150
R KK M+ +++V+ ++ G LCD F+ P K+ P Y++++ P+D
Sbjct: 526 RLSSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKI 585
Query: 151 IQQKLKTDEYDDLSDFQADIELL 173
I+ ++ D+Y D++L+
Sbjct: 586 IEHNIRNDKYAGEEGMMEDMKLM 608
Score = 92 (37.4 bits), Expect = 2.5e-43, Sum P(3) = 2.5e-43
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
R P+ ++I + N+Y LD ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 832 RPPLTFDIIRKNVESNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIRIR 891
Query: 563 MHL 565
L
Sbjct: 892 DEL 894
Score = 84 (34.6 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 173 LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFH 232
L + P+D KI+ + ++Y D+ D ++ NA T+ + S ++DA L ++
Sbjct: 713 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLL 772
Query: 233 STRNKLLNPQ-SH 244
TR L + SH
Sbjct: 773 ETRRDLEGDEDSH 785
Score = 69 (29.3 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 38/190 (20%), Positives = 76/190 (40%)
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGT 247
L+ +L D+ I+ + K + +++D ++E F N E
Sbjct: 700 LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL 759
Query: 248 SQKRSMDF-MMASET----EDSRDSSI--CTEDEQNQCEDLFNAVMTSTDADSRPLHEVF 300
K ++ + ET E DS + T Q +LF +VM+ D + R +
Sbjct: 760 IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL 819
Query: 301 QLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
+P+ P + + D+ I + ++ +Y L ++ + + + A N S+
Sbjct: 820 AEIPAVD--PNFPSRPPLTFDI--IRKNVESNRYRRLDLFQEHMFEVLERARRMNRTDSE 875
Query: 361 IYKDAKALKK 370
IY+DA L++
Sbjct: 876 IYEDAVELQQ 885
Score = 44 (20.5 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 25/101 (24%), Positives = 44/101 (43%)
Query: 483 SHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNE 542
S+ ++RL ++ +EV+ + M S++ YE E+ FI++ D CK E
Sbjct: 846 SNRYRRLDLFQEH--MFEVLERARRMNRTDSEI----YEDAVELQQFFIRIRDELCKNGE 899
Query: 543 PDSHIYKDALSLQRIVLQTKMHLRED--EDSVPDVPAAVQE 581
+ ALS T HL D ++ +P ++E
Sbjct: 900 I---LLSPALSY------TTKHLHNDVEKEKKEKLPKEIEE 931
Score = 39 (18.8 bits), Expect = 8.1e-38, Sum P(3) = 8.1e-38
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 602 HVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPS 642
HV NV ++ ++ L +M ++D +GR E+P+
Sbjct: 785 HVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPA 824
Score = 38 (18.4 bits), Expect = 4.1e-17, Sum P(3) = 4.1e-17
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIEQGK 383
T +EP YK L L +T M GK
Sbjct: 1217 TEHEPTKMFYKKEVFLSNLEETCPMSCILGK 1247
>UNIPROTKB|E2RRR3 [details] [associations]
symbol:PBRM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 Pfam:PF00505
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00390000003017 EMBL:AAEX03012193
EMBL:AAEX03012194 EMBL:AAEX03012195 Ensembl:ENSCAFT00000014499
Uniprot:E2RRR3
Length = 1635
Score = 626 (225.4 bits), Expect = 3.5e-80, Sum P(2) = 3.5e-80
Identities = 166/495 (33%), Positives = 254/495 (51%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV+ PID +KIQQKLK +EYDD++ AD +LL NAK +YK +S E++ A +L +L+
Sbjct: 87 VVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLR 146
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
TRN+ + + + TE S S + + E L A++ +T+
Sbjct: 147 TRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPSYL-----KEILEQLLEAIVVATNPSG 201
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KNA T
Sbjct: 202 RLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKT 261
Query: 354 FNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSK----RIRGGQ----SLS 405
+NEPGSQ++KDA ++KK+ KK EIE + T + R S R+ G SL
Sbjct: 262 YNEPGSQVFKDANSIKKIFYMKKAEIEHHEMTKSSLRMRTPSNLAAARLTGPSHSKGSLG 321
Query: 406 AITAALXXXXXXXXXXXXXXXXXPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQK-MR 464
L ++ +A + A S+ M
Sbjct: 322 EERNPTSKYYRNKRTVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMD 381
Query: 465 I------LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYN 518
+ LY+T++ +C G+ ++ F LPS+ YPDYY+ I+ P+ ++ I +KL+
Sbjct: 382 VSNPFYQLYDTVR-SCRNNQGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQ 440
Query: 519 QYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAA 578
+YE LD + D MF+NA +YN P+S IYK L LQ+++ K L +D + D +
Sbjct: 441 EYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDD-IEDGDSM 499
Query: 579 VQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQ-DGRQPMLMF 637
+ TS S K+ N+ K+R+ L +++ R+ GR+ +F
Sbjct: 500 ISSA-TSDAGSAKRKSKK--------NIR----KQRMKILFNVVLEAREPGSGRRLCDLF 546
Query: 638 MELPSAKIYPEYYKV 652
M PS K YP+YYK+
Sbjct: 547 MVKPSKKDYPDYYKI 561
Score = 362 (132.5 bits), Expect = 2.4e-73, Sum P(3) = 2.4e-73
Identities = 71/135 (52%), Positives = 96/135 (71%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
QK+ +Y +K + K GR+LS IF RLPSR + PDYY I+KP+DME I S + N+Y
Sbjct: 660 QKLNEVYEAVKNYTD-KRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKY 718
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VPDVPAAV 579
+ +D MV DF+ MF+NAC YNEP+S IYKDAL L +++L+T+ L DEDS VP+V +
Sbjct: 719 QDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLI 778
Query: 580 QELLTSLFTSVYNHQ 594
QEL+ +LF SV +HQ
Sbjct: 779 QELIHNLFVSVMSHQ 793
Score = 286 (105.7 bits), Expect = 2.4e-73, Sum P(3) = 2.4e-73
Identities = 68/205 (33%), Positives = 115/205 (56%)
Query: 178 PIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
PI +I+ KLK EY+ L + D+ L+ +NAK + NS ++ +L ++ + + +
Sbjct: 427 PISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKE 486
Query: 238 LLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE--QNQCEDLFNAVMTSTDADS-R 294
L E D M++S T D+ + ++ + + + LFN V+ + + S R
Sbjct: 487 LARRDDIEDG------DSMISSATSDAGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR 540
Query: 295 PLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTF 354
L ++F + PSKK YP+YY +I P+DL+ I I++ KYA M +D+ LM +NA +
Sbjct: 541 RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY 600
Query: 355 NEPGSQIYKDAKALKKLVQTKKMEI 379
NE GSQ+Y DA L+KL++ K+ E+
Sbjct: 601 NEEGSQVYNDAHILEKLLKDKRKEL 625
Score = 264 (98.0 bits), Expect = 2.8e-41, Sum P(3) = 2.8e-41
Identities = 64/215 (29%), Positives = 106/215 (49%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+ ++ D+Y D++L+ +NA+ + + SQ + DA L +L
Sbjct: 561 IILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKD 620
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
R K L P + + S + S T +Q + +++ AV TD
Sbjct: 621 KR-KELGPLPDDDDVASPKLKLSRKSGISPKK-SKYMTPMQQ-KLNEVYEAVKNYTDKRG 677
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R L +F LPS+ P+YY I P+D+ I + KY + M +D ++M NACT
Sbjct: 678 RRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACT 737
Query: 354 FNEPGSQIYKDAKALKK-LVQTKK-MEIEQGKFTP 386
+NEP S IYKDA L K L++T++ +E ++ P
Sbjct: 738 YNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVP 772
Score = 258 (95.9 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 62/190 (32%), Positives = 107/190 (56%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
Q+M+IL+N + E EP +GR+L +F PS+ DYPDYY++I +P+D+++I +R ++Y
Sbjct: 521 QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKY 580
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQ 580
+ M+ D MF NA YNE S +Y DA L+++ L+ K R++ +PD
Sbjct: 581 AGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKL-LKDK---RKELGPLPDDDDVAS 636
Query: 581 ELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMEL 640
L S + +K S ++ P++++L + + + +Y D+ GR+ +F+ L
Sbjct: 637 PKLKLSRKSGISPKK----SKYMT-----PMQQKLNEVYEAVKNYTDKRGRRLSAIFLRL 687
Query: 641 PSAKIYPEYY 650
PS P+YY
Sbjct: 688 PSRSELPDYY 697
Score = 224 (83.9 bits), Expect = 3.5e-80, Sum P(2) = 3.5e-80
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+DP ++Y+ IR++K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK
Sbjct: 44 VDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKM 103
Query: 158 DEYDDLSDFQADIELL 173
+EYDD++ AD +LL
Sbjct: 104 EEYDDVNLLTADFQLL 119
Score = 209 (78.6 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 60/188 (31%), Positives = 94/188 (50%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNTI++ + + GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++
Sbjct: 53 LYNTIRDY-KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNL 111
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMH-LREDEDSVPDVPAAVQELLT 584
+ ADF +F+NA Y +PDS YK A L + L+T+ +++ E D Q+
Sbjct: 112 LTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQD--- 168
Query: 585 SLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAK 644
N GS LK L L + ++ + GR +F +LPS
Sbjct: 169 -------NQGTVTEGS------SPSYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKV 215
Query: 645 IYPEYYKV 652
YP+YY +
Sbjct: 216 QYPDYYAI 223
Score = 168 (64.2 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 53/185 (28%), Positives = 91/185 (49%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ Q+YD +R+ + G L+ +PF +P K++ P Y++ + PI +I+ KLK
Sbjct: 380 MDVSNPFYQLYDTVRSCRNNQGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKN 439
Query: 158 DEYDDLSDFQADIELLV-------VTNPIDF---IKIQQKL--KTDEY---DDLSDFQAD 202
EY+ L + D+ L+ V N + +K+QQ + K E DD+ D +
Sbjct: 440 QEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSM 499
Query: 203 IELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMD-FMMASET 261
I +A + KR S+++ Q + LF N +L ++ E S +R D FM+
Sbjct: 500 ISSATSDAGSA-KRKSKKNIRKQRMKILF----NVVL--EAREPGSGRRLCDLFMVKPSK 552
Query: 262 EDSRD 266
+D D
Sbjct: 553 KDYPD 557
Score = 152 (58.6 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 36/120 (30%), Positives = 64/120 (53%)
Query: 265 RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRT 324
R S++ T D C +L+N + D R L E+F P ++ P+YY+V+ PIDL
Sbjct: 37 RLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMK 96
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL-VQTKKMEIEQGK 383
I ++++ +Y + + D L+ NA + +P S YK A L L ++T+ +++G+
Sbjct: 97 IQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGE 156
Score = 115 (45.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 20/83 (24%), Positives = 44/83 (53%)
Query: 93 PKRKK-IDP-SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIK 150
PK+ K + P + ++Y+ ++N+ + G L F+R+P + + P Y+ + P+D K
Sbjct: 649 PKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEK 708
Query: 151 IQQKLKTDEYDDLSDFQADIELL 173
I+ + ++Y D+ D ++
Sbjct: 709 IRSHMMANKYQDIDSMVEDFVMM 731
Score = 103 (41.3 bits), Expect = 1.1e-60, Sum P(3) = 1.1e-60
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
+ ++Q+ + I G L+ + F ++P K Q P Y+ ++ PID I Q+++ Y
Sbjct: 184 EILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYK 243
Query: 162 DLSDFQADIELL 173
+ DI+LL
Sbjct: 244 SIHAMAKDIDLL 255
Score = 99 (39.9 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 94 KRKKIDPSDAMQQIYDVIRNFKKE-DGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQ 152
K KK M+ +++V+ ++ G LCD F+ P K+ P Y++++ P+D I+
Sbjct: 513 KSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIE 572
Query: 153 QKLKTDEYDDLSDFQADIELL 173
++ D+Y D++L+
Sbjct: 573 HNIRNDKYAGEEGMIEDMKLM 593
Score = 89 (36.4 bits), Expect = 8.8e-44, Sum P(3) = 8.8e-44
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++I + N+Y LD ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 817 KPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIR 876
Query: 563 MHL 565
L
Sbjct: 877 DEL 879
Score = 84 (34.6 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 173 LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFH 232
L + P+D KI+ + ++Y D+ D ++ NA T+ + S ++DA L ++
Sbjct: 698 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLL 757
Query: 233 STRNKLLNPQ-SH 244
TR L + SH
Sbjct: 758 ETRRDLEGDEDSH 770
Score = 72 (30.4 bits), Expect = 9.6e-16, Sum P(3) = 9.6e-16
Identities = 38/190 (20%), Positives = 78/190 (41%)
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGT 247
L+ +L D+ I+ + K + +++D ++E F N E
Sbjct: 685 LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL 744
Query: 248 SQKRSMDF-MMASET----EDSRDSSI--CTEDEQNQCEDLFNAVMTSTDADSRPLHEVF 300
K ++ + ET E DS + T Q +LF +VM+ D + R +
Sbjct: 745 IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL 804
Query: 301 QLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
+P+ P + + + D+ I + +++ +Y L ++ + + + A N S+
Sbjct: 805 AEIPAVD--PNFPNKPPLTFDI--IRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSE 860
Query: 361 IYKDAKALKK 370
IY+DA L++
Sbjct: 861 IYEDAVELQQ 870
Score = 43 (20.2 bits), Expect = 5.4e-39, Sum P(3) = 5.4e-39
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 462 KMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYE 521
K + ++ I++ E R+L +FQ H +EV+ + M S++ YE
Sbjct: 817 KPPLTFDIIRKNVENNRYRRLD-LFQE----H----MFEVLERARRMNRTDSEI----YE 863
Query: 522 HLDEMVADFIQMFDNACKYNE 542
E+ FI++ D CK E
Sbjct: 864 DAVELQQFFIKIRDELCKNGE 884
Score = 39 (18.8 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 602 HVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPS 642
HV NV ++ ++ L +M ++D +GR E+P+
Sbjct: 770 HVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPA 809
Score = 37 (18.1 bits), Expect = 5.7e-17, Sum P(3) = 5.7e-17
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIEQGK 383
T +EP YK L L +T M GK
Sbjct: 1203 TEHEPTKMFYKKEVFLSNLEETCPMTCILGK 1233
>UNIPROTKB|E2RRL7 [details] [associations]
symbol:PBRM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 Pfam:PF00505
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 OMA:WLKVGDC GeneTree:ENSGT00390000003017
EMBL:AAEX03012193 EMBL:AAEX03012194 EMBL:AAEX03012195
Ensembl:ENSCAFT00000014524 Uniprot:E2RRL7
Length = 1689
Score = 626 (225.4 bits), Expect = 4.0e-80, Sum P(2) = 4.0e-80
Identities = 166/495 (33%), Positives = 254/495 (51%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV+ PID +KIQQKLK +EYDD++ AD +LL NAK +YK +S E++ A +L +L+
Sbjct: 87 VVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLR 146
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
TRN+ + + + TE S S + + E L A++ +T+
Sbjct: 147 TRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPSYL-----KEILEQLLEAIVVATNPSG 201
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KNA T
Sbjct: 202 RLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKT 261
Query: 354 FNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSK----RIRGGQ----SLS 405
+NEPGSQ++KDA ++KK+ KK EIE + T + R S R+ G SL
Sbjct: 262 YNEPGSQVFKDANSIKKIFYMKKAEIEHHEMTKSSLRMRTPSNLAAARLTGPSHSKGSLG 321
Query: 406 AITAALXXXXXXXXXXXXXXXXXPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQK-MR 464
L ++ +A + A S+ M
Sbjct: 322 EERNPTSKYYRNKRTVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMD 381
Query: 465 I------LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYN 518
+ LY+T++ +C G+ ++ F LPS+ YPDYY+ I+ P+ ++ I +KL+
Sbjct: 382 VSNPFYQLYDTVR-SCRNNQGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQ 440
Query: 519 QYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAA 578
+YE LD + D MF+NA +YN P+S IYK L LQ+++ K L +D + D +
Sbjct: 441 EYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDD-IEDGDSM 499
Query: 579 VQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQ-DGRQPMLMF 637
+ TS S K+ N+ K+R+ L +++ R+ GR+ +F
Sbjct: 500 ISSA-TSDAGSAKRKSKK--------NIR----KQRMKILFNVVLEAREPGSGRRLCDLF 546
Query: 638 MELPSAKIYPEYYKV 652
M PS K YP+YYK+
Sbjct: 547 MVKPSKKDYPDYYKI 561
Score = 362 (132.5 bits), Expect = 2.7e-73, Sum P(3) = 2.7e-73
Identities = 71/135 (52%), Positives = 96/135 (71%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
QK+ +Y +K + K GR+LS IF RLPSR + PDYY I+KP+DME I S + N+Y
Sbjct: 660 QKLNEVYEAVKNYTD-KRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKY 718
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VPDVPAAV 579
+ +D MV DF+ MF+NAC YNEP+S IYKDAL L +++L+T+ L DEDS VP+V +
Sbjct: 719 QDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLI 778
Query: 580 QELLTSLFTSVYNHQ 594
QEL+ +LF SV +HQ
Sbjct: 779 QELIHNLFVSVMSHQ 793
Score = 286 (105.7 bits), Expect = 2.7e-73, Sum P(3) = 2.7e-73
Identities = 68/205 (33%), Positives = 115/205 (56%)
Query: 178 PIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
PI +I+ KLK EY+ L + D+ L+ +NAK + NS ++ +L ++ + + +
Sbjct: 427 PISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKE 486
Query: 238 LLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE--QNQCEDLFNAVMTSTDADS-R 294
L E D M++S T D+ + ++ + + + LFN V+ + + S R
Sbjct: 487 LARRDDIEDG------DSMISSATSDAGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR 540
Query: 295 PLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTF 354
L ++F + PSKK YP+YY +I P+DL+ I I++ KYA M +D+ LM +NA +
Sbjct: 541 RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY 600
Query: 355 NEPGSQIYKDAKALKKLVQTKKMEI 379
NE GSQ+Y DA L+KL++ K+ E+
Sbjct: 601 NEEGSQVYNDAHILEKLLKDKRKEL 625
Score = 264 (98.0 bits), Expect = 3.1e-41, Sum P(3) = 3.1e-41
Identities = 64/215 (29%), Positives = 106/215 (49%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+ ++ D+Y D++L+ +NA+ + + SQ + DA L +L
Sbjct: 561 IILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKD 620
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
R K L P + + S + S T +Q + +++ AV TD
Sbjct: 621 KR-KELGPLPDDDDVASPKLKLSRKSGISPKK-SKYMTPMQQ-KLNEVYEAVKNYTDKRG 677
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R L +F LPS+ P+YY I P+D+ I + KY + M +D ++M NACT
Sbjct: 678 RRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACT 737
Query: 354 FNEPGSQIYKDAKALKK-LVQTKK-MEIEQGKFTP 386
+NEP S IYKDA L K L++T++ +E ++ P
Sbjct: 738 YNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVP 772
Score = 258 (95.9 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 62/190 (32%), Positives = 107/190 (56%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
Q+M+IL+N + E EP +GR+L +F PS+ DYPDYY++I +P+D+++I +R ++Y
Sbjct: 521 QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKY 580
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQ 580
+ M+ D MF NA YNE S +Y DA L+++ L+ K R++ +PD
Sbjct: 581 AGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKL-LKDK---RKELGPLPDDDDVAS 636
Query: 581 ELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMEL 640
L S + +K S ++ P++++L + + + +Y D+ GR+ +F+ L
Sbjct: 637 PKLKLSRKSGISPKK----SKYMT-----PMQQKLNEVYEAVKNYTDKRGRRLSAIFLRL 687
Query: 641 PSAKIYPEYY 650
PS P+YY
Sbjct: 688 PSRSELPDYY 697
Score = 224 (83.9 bits), Expect = 4.0e-80, Sum P(2) = 4.0e-80
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+DP ++Y+ IR++K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK
Sbjct: 44 VDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKM 103
Query: 158 DEYDDLSDFQADIELL 173
+EYDD++ AD +LL
Sbjct: 104 EEYDDVNLLTADFQLL 119
Score = 209 (78.6 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 60/188 (31%), Positives = 94/188 (50%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNTI++ + + GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++
Sbjct: 53 LYNTIRDY-KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNL 111
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMH-LREDEDSVPDVPAAVQELLT 584
+ ADF +F+NA Y +PDS YK A L + L+T+ +++ E D Q+
Sbjct: 112 LTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQD--- 168
Query: 585 SLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAK 644
N GS LK L L + ++ + GR +F +LPS
Sbjct: 169 -------NQGTVTEGS------SPSYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKV 215
Query: 645 IYPEYYKV 652
YP+YY +
Sbjct: 216 QYPDYYAI 223
Score = 168 (64.2 bits), Expect = 3.7e-42, Sum P(2) = 3.7e-42
Identities = 53/185 (28%), Positives = 91/185 (49%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ Q+YD +R+ + G L+ +PF +P K++ P Y++ + PI +I+ KLK
Sbjct: 380 MDVSNPFYQLYDTVRSCRNNQGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKN 439
Query: 158 DEYDDLSDFQADIELLV-------VTNPIDF---IKIQQKL--KTDEY---DDLSDFQAD 202
EY+ L + D+ L+ V N + +K+QQ + K E DD+ D +
Sbjct: 440 QEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSM 499
Query: 203 IELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMD-FMMASET 261
I +A + KR S+++ Q + LF N +L ++ E S +R D FM+
Sbjct: 500 ISSATSDAGSA-KRKSKKNIRKQRMKILF----NVVL--EAREPGSGRRLCDLFMVKPSK 552
Query: 262 EDSRD 266
+D D
Sbjct: 553 KDYPD 557
Score = 152 (58.6 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 36/120 (30%), Positives = 64/120 (53%)
Query: 265 RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRT 324
R S++ T D C +L+N + D R L E+F P ++ P+YY+V+ PIDL
Sbjct: 37 RLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMK 96
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL-VQTKKMEIEQGK 383
I ++++ +Y + + D L+ NA + +P S YK A L L ++T+ +++G+
Sbjct: 97 IQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGE 156
Score = 115 (45.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/83 (24%), Positives = 44/83 (53%)
Query: 93 PKRKK-IDP-SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIK 150
PK+ K + P + ++Y+ ++N+ + G L F+R+P + + P Y+ + P+D K
Sbjct: 649 PKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEK 708
Query: 151 IQQKLKTDEYDDLSDFQADIELL 173
I+ + ++Y D+ D ++
Sbjct: 709 IRSHMMANKYQDIDSMVEDFVMM 731
Score = 103 (41.3 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
+ ++Q+ + I G L+ + F ++P K Q P Y+ ++ PID I Q+++ Y
Sbjct: 184 EILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYK 243
Query: 162 DLSDFQADIELL 173
+ DI+LL
Sbjct: 244 SIHAMAKDIDLL 255
Score = 99 (39.9 bits), Expect = 6.5e-35, Sum P(2) = 6.5e-35
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 94 KRKKIDPSDAMQQIYDVIRNFKKE-DGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQ 152
K KK M+ +++V+ ++ G LCD F+ P K+ P Y++++ P+D I+
Sbjct: 513 KSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIE 572
Query: 153 QKLKTDEYDDLSDFQADIELL 173
++ D+Y D++L+
Sbjct: 573 HNIRNDKYAGEEGMIEDMKLM 593
Score = 89 (36.4 bits), Expect = 1.0e-43, Sum P(3) = 1.0e-43
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++I + N+Y LD ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 817 KPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIR 876
Query: 563 MHL 565
L
Sbjct: 877 DEL 879
Score = 84 (34.6 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 173 LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFH 232
L + P+D KI+ + ++Y D+ D ++ NA T+ + S ++DA L ++
Sbjct: 698 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLL 757
Query: 233 STRNKLLNPQ-SH 244
TR L + SH
Sbjct: 758 ETRRDLEGDEDSH 770
Score = 72 (30.4 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 38/190 (20%), Positives = 78/190 (41%)
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGT 247
L+ +L D+ I+ + K + +++D ++E F N E
Sbjct: 685 LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL 744
Query: 248 SQKRSMDF-MMASET----EDSRDSSI--CTEDEQNQCEDLFNAVMTSTDADSRPLHEVF 300
K ++ + ET E DS + T Q +LF +VM+ D + R +
Sbjct: 745 IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL 804
Query: 301 QLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
+P+ P + + + D+ I + +++ +Y L ++ + + + A N S+
Sbjct: 805 AEIPAVD--PNFPNKPPLTFDI--IRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSE 860
Query: 361 IYKDAKALKK 370
IY+DA L++
Sbjct: 861 IYEDAVELQQ 870
Score = 43 (20.2 bits), Expect = 6.2e-39, Sum P(3) = 6.2e-39
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 462 KMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYE 521
K + ++ I++ E R+L +FQ H +EV+ + M S++ YE
Sbjct: 817 KPPLTFDIIRKNVENNRYRRLD-LFQE----H----MFEVLERARRMNRTDSEI----YE 863
Query: 522 HLDEMVADFIQMFDNACKYNE 542
E+ FI++ D CK E
Sbjct: 864 DAVELQQFFIKIRDELCKNGE 884
Score = 39 (18.8 bits), Expect = 1.6e-38, Sum P(3) = 1.6e-38
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 602 HVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPS 642
HV NV ++ ++ L +M ++D +GR E+P+
Sbjct: 770 HVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPA 809
Score = 37 (18.1 bits), Expect = 6.4e-17, Sum P(3) = 6.4e-17
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIEQGK 383
T +EP YK L L +T M GK
Sbjct: 1202 TEHEPTKMFYKKEVFLSNLEETCPMTCILGK 1232
>UNIPROTKB|H0Y5B5 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
GO:GO:0003677 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 EMBL:AC104446 HGNC:HGNC:30064 ChiTaRS:PBRM1
EMBL:AC112215 ProteinModelPortal:H0Y5B5 Ensembl:ENST00000446103
Bgee:H0Y5B5 Uniprot:H0Y5B5
Length = 1085
Score = 638 (229.6 bits), Expect = 4.0e-80, Sum P(2) = 4.0e-80
Identities = 163/498 (32%), Positives = 256/498 (51%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV+ PID +KIQQKLK +EYDD++ AD +LL NAK++YK +S E++ A +L +L+
Sbjct: 31 VVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLR 90
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
TRN+ + + + TE S + + + E L A++ +T+
Sbjct: 91 TRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPAYL-----KEILEQLLEAIVVATNPSG 145
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KNA T
Sbjct: 146 RLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKT 205
Query: 354 FNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSK----RIRGGQ----SLS 405
+NEPGSQ++KDA ++KK+ KK EIE + + R S R+ G SL
Sbjct: 206 YNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLG 265
Query: 406 AITAALXXXXXXXXXXXXXXXXXPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQK-MR 464
L ++ +A + A S+ M
Sbjct: 266 EERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMD 325
Query: 465 I------LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYN 518
+ LY+T++ +C G+ ++ F LPS+ YPDYY+ I+ P+ ++ I +KL+
Sbjct: 326 VSNPFYQLYDTVR-SCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQ 384
Query: 519 QYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAA 578
+YE LD + D MF+NA +YN P+S IYK L LQ+++ K L +D + D +
Sbjct: 385 EYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDD-IEDGDSM 443
Query: 579 VQELLTSLFTSVYN---HQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQ-DGRQPM 634
+ + ++ H + LG L+ K+R+ L +++ R+ GR+
Sbjct: 444 ISSATSDTGSAKRKRNTHDSEMLG-LRRLSSKKNIRKQRMKILFNVVLEAREPGSGRRLC 502
Query: 635 LMFMELPSAKIYPEYYKV 652
+FM PS K YP+YYK+
Sbjct: 503 DLFMVKPSKKDYPDYYKI 520
Score = 362 (132.5 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 71/135 (52%), Positives = 96/135 (71%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
QK+ +Y +K + K GR+LS IF RLPSR + PDYY I+KP+DME I S + N+Y
Sbjct: 619 QKLNEVYEAVKNYTD-KRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKY 677
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VPDVPAAV 579
+ +D MV DF+ MF+NAC YNEP+S IYKDAL L +++L+T+ L DEDS VP+V +
Sbjct: 678 QDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLI 737
Query: 580 QELLTSLFTSVYNHQ 594
QEL+ +LF SV +HQ
Sbjct: 738 QELIHNLFVSVMSHQ 752
Score = 278 (102.9 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 71/214 (33%), Positives = 116/214 (54%)
Query: 178 PIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
PI +I+ KLK EY+ L + D+ L+ +NAK + NS ++ +L ++ + + +
Sbjct: 371 PISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKE 430
Query: 238 LLNPQSHE-GTSQKRSM--DFMMASETEDSRDSSIC----TEDEQN----QCEDLFNAVM 286
L E G S S D A ++ DS + ++N + + LFN V+
Sbjct: 431 LARRDDIEDGDSMISSATSDTGSAKRKRNTHDSEMLGLRRLSSKKNIRKQRMKILFNVVL 490
Query: 287 TSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
+ + S R L ++F + PSKK YP+YY +I P+DL+ I I++ KYA M +D+
Sbjct: 491 EAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMK 550
Query: 346 LMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
LM +NA +NE GSQ+Y DA L+KL++ K+ E+
Sbjct: 551 LMFRNARHYNEEGSQVYNDAHILEKLLKEKRKEL 584
Score = 265 (98.3 bits), Expect = 1.0e-39, Sum P(3) = 1.0e-39
Identities = 64/215 (29%), Positives = 106/215 (49%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+ ++ D+Y D++L+ +NA+ + + SQ + DA L +L
Sbjct: 520 IILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKE 579
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
R K L P + + S + S T +Q + +++ AV TD
Sbjct: 580 KR-KELGPLPDDDDMASPKLKLSRKSGISPKK-SKYMTPMQQ-KLNEVYEAVKNYTDKRG 636
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R L +F LPS+ P+YY I P+D+ I + KY + M +D ++M NACT
Sbjct: 637 RRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACT 696
Query: 354 FNEPGSQIYKDAKALKK-LVQTKK-MEIEQGKFTP 386
+NEP S IYKDA L K L++T++ +E ++ P
Sbjct: 697 YNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVP 731
Score = 258 (95.9 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 59/190 (31%), Positives = 105/190 (55%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
Q+M+IL+N + E EP +GR+L +F PS+ DYPDYY++I +P+D+++I +R ++Y
Sbjct: 480 QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKY 539
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQ 580
+ M+ D MF NA YNE S +Y DA L++++ + + L D D A
Sbjct: 540 AGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPD---DDDMASP 596
Query: 581 ELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMEL 640
+L S + + + + + P++++L + + + +Y D+ GR+ +F+ L
Sbjct: 597 KLKLSRKSGISPKKSKYM----------TPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRL 646
Query: 641 PSAKIYPEYY 650
PS P+YY
Sbjct: 647 PSRSELPDYY 656
Score = 201 (75.8 bits), Expect = 4.0e-80, Sum P(2) = 4.0e-80
Identities = 37/63 (58%), Positives = 49/63 (77%)
Query: 111 IRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADI 170
IR++K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK +EYDD++ AD
Sbjct: 1 IRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADF 60
Query: 171 ELL 173
+LL
Sbjct: 61 QLL 63
Score = 191 (72.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 55/175 (31%), Positives = 85/175 (48%)
Query: 479 GRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNAC 538
GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++ + ADF +F+NA
Sbjct: 9 GRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAK 68
Query: 539 KYNEPDSHIYKDALSLQRIVLQTKMH-LREDEDSVPDVPAAVQELLTSLFTSVYNHQKQC 597
Y +PDS YK A L + L+T+ +++ E D Q+ N
Sbjct: 69 SYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQD----------NQGTVT 118
Query: 598 LGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKV 652
GS LK L L + ++ + GR +F +LPS YP+YY +
Sbjct: 119 EGSSPAY------LKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAI 167
Score = 152 (58.6 bits), Expect = 4.4e-41, Sum P(2) = 4.4e-41
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ Q+YD +R+ + G L+ +PF +P K++ P Y++ + PI +I+ KLK
Sbjct: 324 MDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKN 383
Query: 158 DEYDDLSDFQADIELL 173
EY+ L + D+ L+
Sbjct: 384 QEYETLDHLECDLNLM 399
Score = 125 (49.1 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 29/95 (30%), Positives = 53/95 (55%)
Query: 290 DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
D R L E+F P ++ P+YY+V+ PIDL I ++++ +Y + + D L+
Sbjct: 6 DEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFN 65
Query: 350 NACTFNEPGSQIYKDAKALKKL-VQTKKMEIEQGK 383
NA ++ +P S YK A L L ++T+ +++G+
Sbjct: 66 NAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGE 100
Score = 115 (45.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 20/83 (24%), Positives = 44/83 (53%)
Query: 93 PKRKK-IDP-SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIK 150
PK+ K + P + ++Y+ ++N+ + G L F+R+P + + P Y+ + P+D K
Sbjct: 608 PKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEK 667
Query: 151 IQQKLKTDEYDDLSDFQADIELL 173
I+ + ++Y D+ D ++
Sbjct: 668 IRSHMMANKYQDIDSMVEDFVMM 690
Score = 103 (41.3 bits), Expect = 1.1e-60, Sum P(3) = 1.1e-60
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
+ ++Q+ + I G L+ + F ++P K Q P Y+ ++ PID I Q+++ Y
Sbjct: 128 EILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYK 187
Query: 162 DLSDFQADIELL 173
+ DI+LL
Sbjct: 188 SIHAMAKDIDLL 199
Score = 96 (38.9 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 21/83 (25%), Positives = 42/83 (50%)
Query: 92 RPKRKKIDPSDAMQQIYDVIRNFKKE-DGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIK 150
R KK M+ +++V+ ++ G LCD F+ P K+ P Y++++ P+D
Sbjct: 470 RLSSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKI 529
Query: 151 IQQKLKTDEYDDLSDFQADIELL 173
I+ ++ D+Y D++L+
Sbjct: 530 IEHNIRNDKYAGEEGMIEDMKLM 552
Score = 89 (36.4 bits), Expect = 3.3e-41, Sum P(3) = 3.3e-41
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++I + N+Y LD ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 776 KPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIR 835
Query: 563 MHL 565
L
Sbjct: 836 DEL 838
Score = 84 (34.6 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 173 LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFH 232
L + P+D KI+ + ++Y D+ D ++ NA T+ + S ++DA L ++
Sbjct: 657 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLL 716
Query: 233 STRNKLLNPQ-SH 244
TR L + SH
Sbjct: 717 ETRRDLEGDEDSH 729
Score = 72 (30.4 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 38/190 (20%), Positives = 78/190 (41%)
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGT 247
L+ +L D+ I+ + K + +++D ++E F N E
Sbjct: 644 LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL 703
Query: 248 SQKRSMDF-MMASET----EDSRDSSI--CTEDEQNQCEDLFNAVMTSTDADSRPLHEVF 300
K ++ + ET E DS + T Q +LF +VM+ D + R +
Sbjct: 704 IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL 763
Query: 301 QLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
+P+ P + + + D+ I + +++ +Y L ++ + + + A N S+
Sbjct: 764 AEIPAVD--PNFPNKPPLTFDI--IRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSE 819
Query: 361 IYKDAKALKK 370
IY+DA L++
Sbjct: 820 IYEDAVELQQ 829
Score = 43 (20.2 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 462 KMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYE 521
K + ++ I++ E R+L +FQ H +EV+ + M S++ YE
Sbjct: 776 KPPLTFDIIRKNVENNRYRRLD-LFQE----H----MFEVLERARRMNRTDSEI----YE 822
Query: 522 HLDEMVADFIQMFDNACKYNE 542
E+ FI++ D CK E
Sbjct: 823 DAVELQQFFIKIRDELCKNGE 843
Score = 39 (18.8 bits), Expect = 5.2e-36, Sum P(3) = 5.2e-36
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 602 HVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPS 642
HV NV ++ ++ L +M ++D +GR E+P+
Sbjct: 729 HVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPA 768
>UNIPROTKB|E7EVG2 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 Pfam:PF00505 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC104446
HGNC:HGNC:30064 ChiTaRS:PBRM1 EMBL:AC112215 IPI:IPI00916875
ProteinModelPortal:E7EVG2 SMR:E7EVG2 Ensembl:ENST00000423351
UCSC:uc003dez.1 ArrayExpress:E7EVG2 Bgee:E7EVG2 Uniprot:E7EVG2
Length = 1461
Score = 621 (223.7 bits), Expect = 7.3e-80, Sum P(2) = 7.3e-80
Identities = 164/495 (33%), Positives = 254/495 (51%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV+ PID +KIQQKLK +EYDD++ AD +LL NAK++YK +S E++ A +L +L+
Sbjct: 87 VVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLR 146
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
TRN+ + + + TE S + + + E L A++ +T+
Sbjct: 147 TRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPAYL-----KEILEQLLEAIVVATNPSG 201
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KNA T
Sbjct: 202 RLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKT 261
Query: 354 FNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSK----RIRGGQ----SLS 405
+NEPGSQ++KDA ++KK+ KK EIE + + R S R+ G SL
Sbjct: 262 YNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLG 321
Query: 406 AITAALXXXXXXXXXXXXXXXXXPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQK-MR 464
L ++ +A + A S+ M
Sbjct: 322 EERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMD 381
Query: 465 I------LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYN 518
+ LY+T++ +C G+ ++ F LPS+ YPDYY+ I+ P+ ++ I +KL+
Sbjct: 382 VSNPFYQLYDTVR-SCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQ 440
Query: 519 QYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAA 578
+YE LD + D MF+NA +YN P+S IYK L LQ+++ K L +D + D +
Sbjct: 441 EYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDD-IEDGDSM 499
Query: 579 VQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQ-DGRQPMLMF 637
+ TS S K+ N+ K+R+ L +++ R+ GR+ +F
Sbjct: 500 ISSA-TSDTGSAKRKSKK--------NIR----KQRMKILFNVVLEAREPGSGRRLCDLF 546
Query: 638 MELPSAKIYPEYYKV 652
M PS K YP+YYK+
Sbjct: 547 MVKPSKKDYPDYYKI 561
Score = 362 (132.5 bits), Expect = 1.4e-73, Sum P(3) = 1.4e-73
Identities = 71/135 (52%), Positives = 96/135 (71%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
QK+ +Y +K + K GR+LS IF RLPSR + PDYY I+KP+DME I S + N+Y
Sbjct: 660 QKLNEVYEAVKNYTD-KRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKY 718
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VPDVPAAV 579
+ +D MV DF+ MF+NAC YNEP+S IYKDAL L +++L+T+ L DEDS VP+V +
Sbjct: 719 QDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLI 778
Query: 580 QELLTSLFTSVYNHQ 594
QEL+ +LF SV +HQ
Sbjct: 779 QELIHNLFVSVMSHQ 793
Score = 286 (105.7 bits), Expect = 1.4e-73, Sum P(3) = 1.4e-73
Identities = 68/205 (33%), Positives = 115/205 (56%)
Query: 178 PIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
PI +I+ KLK EY+ L + D+ L+ +NAK + NS ++ +L ++ + + +
Sbjct: 427 PISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKE 486
Query: 238 LLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE--QNQCEDLFNAVMTSTDADS-R 294
L E D M++S T D+ + ++ + + + LFN V+ + + S R
Sbjct: 487 LARRDDIEDG------DSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR 540
Query: 295 PLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTF 354
L ++F + PSKK YP+YY +I P+DL+ I I++ KYA M +D+ LM +NA +
Sbjct: 541 RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY 600
Query: 355 NEPGSQIYKDAKALKKLVQTKKMEI 379
NE GSQ+Y DA L+KL++ K+ E+
Sbjct: 601 NEEGSQVYNDAHILEKLLKEKRKEL 625
Score = 265 (98.3 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 64/215 (29%), Positives = 106/215 (49%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+ ++ D+Y D++L+ +NA+ + + SQ + DA L +L
Sbjct: 561 IILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKE 620
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
R K L P + + S + S T +Q + +++ AV TD
Sbjct: 621 KR-KELGPLPDDDDMASPKLKLSRKSGISPKK-SKYMTPMQQ-KLNEVYEAVKNYTDKRG 677
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R L +F LPS+ P+YY I P+D+ I + KY + M +D ++M NACT
Sbjct: 678 RRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACT 737
Query: 354 FNEPGSQIYKDAKALKK-LVQTKK-MEIEQGKFTP 386
+NEP S IYKDA L K L++T++ +E ++ P
Sbjct: 738 YNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVP 772
Score = 258 (95.9 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 59/190 (31%), Positives = 105/190 (55%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
Q+M+IL+N + E EP +GR+L +F PS+ DYPDYY++I +P+D+++I +R ++Y
Sbjct: 521 QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKY 580
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQ 580
+ M+ D MF NA YNE S +Y DA L++++ + + L D D A
Sbjct: 581 AGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPD---DDDMASP 637
Query: 581 ELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMEL 640
+L S + + + + + P++++L + + + +Y D+ GR+ +F+ L
Sbjct: 638 KLKLSRKSGISPKKSKYM----------TPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRL 687
Query: 641 PSAKIYPEYY 650
PS P+YY
Sbjct: 688 PSRSELPDYY 697
Score = 224 (83.9 bits), Expect = 7.3e-80, Sum P(2) = 7.3e-80
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+DP ++Y+ IR++K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK
Sbjct: 44 VDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKM 103
Query: 158 DEYDDLSDFQADIELL 173
+EYDD++ AD +LL
Sbjct: 104 EEYDDVNLLTADFQLL 119
Score = 210 (79.0 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 60/188 (31%), Positives = 94/188 (50%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNTI++ + + GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++
Sbjct: 53 LYNTIRDY-KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNL 111
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMH-LREDEDSVPDVPAAVQELLT 584
+ ADF +F+NA Y +PDS YK A L + L+T+ +++ E D Q+
Sbjct: 112 LTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQD--- 168
Query: 585 SLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAK 644
N GS LK L L + ++ + GR +F +LPS
Sbjct: 169 -------NQGTVTEGSSPAY------LKEILEQLLEAIVVATNPSGRLISELFQKLPSKV 215
Query: 645 IYPEYYKV 652
YP+YY +
Sbjct: 216 QYPDYYAI 223
Score = 163 (62.4 bits), Expect = 8.2e-42, Sum P(2) = 8.2e-42
Identities = 52/185 (28%), Positives = 90/185 (48%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ Q+YD +R+ + G L+ +PF +P K++ P Y++ + PI +I+ KLK
Sbjct: 380 MDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKN 439
Query: 158 DEYDDLSDFQADIELLV-------VTNPIDF---IKIQQKL--KTDEY---DDLSDFQAD 202
EY+ L + D+ L+ V N + +K+QQ + K E DD+ D +
Sbjct: 440 QEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSM 499
Query: 203 IELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMD-FMMASET 261
I + + KR S+++ Q + LF N +L ++ E S +R D FM+
Sbjct: 500 ISSATSDTGSA-KRKSKKNIRKQRMKILF----NVVL--EAREPGSGRRLCDLFMVKPSK 552
Query: 262 EDSRD 266
+D D
Sbjct: 553 KDYPD 557
Score = 153 (58.9 bits), Expect = 9.2e-41, Sum P(2) = 9.2e-41
Identities = 36/120 (30%), Positives = 65/120 (54%)
Query: 265 RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRT 324
R S++ T D C +L+N + D R L E+F P ++ P+YY+V+ PIDL
Sbjct: 37 RLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMK 96
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL-VQTKKMEIEQGK 383
I ++++ +Y + + D L+ NA ++ +P S YK A L L ++T+ +++G+
Sbjct: 97 IQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGE 156
Score = 115 (45.5 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 20/83 (24%), Positives = 44/83 (53%)
Query: 93 PKRKK-IDP-SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIK 150
PK+ K + P + ++Y+ ++N+ + G L F+R+P + + P Y+ + P+D K
Sbjct: 649 PKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEK 708
Query: 151 IQQKLKTDEYDDLSDFQADIELL 173
I+ + ++Y D+ D ++
Sbjct: 709 IRSHMMANKYQDIDSMVEDFVMM 731
Score = 103 (41.3 bits), Expect = 6.9e-61, Sum P(3) = 6.9e-61
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
+ ++Q+ + I G L+ + F ++P K Q P Y+ ++ PID I Q+++ Y
Sbjct: 184 EILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYK 243
Query: 162 DLSDFQADIELL 173
+ DI+LL
Sbjct: 244 SIHAMAKDIDLL 255
Score = 99 (39.9 bits), Expect = 4.3e-35, Sum P(2) = 4.3e-35
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 94 KRKKIDPSDAMQQIYDVIRNFKKE-DGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQ 152
K KK M+ +++V+ ++ G LCD F+ P K+ P Y++++ P+D I+
Sbjct: 513 KSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIE 572
Query: 153 QKLKTDEYDDLSDFQADIELL 173
++ D+Y D++L+
Sbjct: 573 HNIRNDKYAGEEGMIEDMKLM 593
Score = 89 (36.4 bits), Expect = 5.7e-44, Sum P(3) = 5.7e-44
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++I + N+Y LD ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 817 KPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIR 876
Query: 563 MHL 565
L
Sbjct: 877 DEL 879
Score = 84 (34.6 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 173 LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFH 232
L + P+D KI+ + ++Y D+ D ++ NA T+ + S ++DA L ++
Sbjct: 698 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLL 757
Query: 233 STRNKLLNPQ-SH 244
TR L + SH
Sbjct: 758 ETRRDLEGDEDSH 770
Score = 72 (30.4 bits), Expect = 6.4e-16, Sum P(3) = 6.4e-16
Identities = 38/190 (20%), Positives = 78/190 (41%)
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGT 247
L+ +L D+ I+ + K + +++D ++E F N E
Sbjct: 685 LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL 744
Query: 248 SQKRSMDF-MMASET----EDSRDSSI--CTEDEQNQCEDLFNAVMTSTDADSRPLHEVF 300
K ++ + ET E DS + T Q +LF +VM+ D + R +
Sbjct: 745 IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL 804
Query: 301 QLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
+P+ P + + + D+ I + +++ +Y L ++ + + + A N S+
Sbjct: 805 AEIPAVD--PNFPNKPPLTFDI--IRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSE 860
Query: 361 IYKDAKALKK 370
IY+DA L++
Sbjct: 861 IYEDAVELQQ 870
Score = 43 (20.2 bits), Expect = 3.5e-39, Sum P(3) = 3.5e-39
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 462 KMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYE 521
K + ++ I++ E R+L +FQ H +EV+ + M S++ YE
Sbjct: 817 KPPLTFDIIRKNVENNRYRRLD-LFQE----H----MFEVLERARRMNRTDSEI----YE 863
Query: 522 HLDEMVADFIQMFDNACKYNE 542
E+ FI++ D CK E
Sbjct: 864 DAVELQQFFIKIRDELCKNGE 884
Score = 39 (18.8 bits), Expect = 9.1e-39, Sum P(3) = 9.1e-39
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 602 HVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPS 642
HV NV ++ ++ L +M ++D +GR E+P+
Sbjct: 770 HVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPA 809
Score = 37 (18.1 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIEQGK 383
T +EP YK L L +T M GK
Sbjct: 1201 TEHEPTKMFYKKEVFLSNLEETCPMTCILGK 1231
>MGI|MGI:1923998 [details] [associations]
symbol:Pbrm1 "polybromo 1" species:10090 "Mus musculus"
[GO:0000776 "kinetochore" evidence=IDA] [GO:0001890 "placenta
development" evidence=IMP] [GO:0001974 "blood vessel remodeling"
evidence=TAS] [GO:0003007 "heart morphogenesis" evidence=TAS]
[GO:0003349 "epicardium-derived cardiac endothelial cell
differentiation" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007507 "heart development"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0060948 "cardiac vascular smooth
muscle cell development" evidence=TAS] [GO:0060979 "vasculogenesis
involved in coronary vascular morphogenesis" evidence=TAS]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 MGI:MGI:1923998
Pfam:PF00505 GO:GO:0005634 GO:GO:0045893 GO:GO:0008285
GO:GO:0000776 GO:GO:0003677 GO:GO:0003007 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001974 GO:GO:0001890
GO:GO:0060979 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 GO:GO:0060948 EMBL:AC154446
HOVERGEN:HBG079860 OrthoDB:EOG41NTK5 ChiTaRS:PBRM1 EMBL:AC154727
EMBL:BC023452 EMBL:BC029037 EMBL:BC055456 EMBL:BC055708
EMBL:BF451491 EMBL:CN530699 EMBL:AK009582 EMBL:AK030781
EMBL:AK030252 EMBL:AK166588 IPI:IPI00856358 IPI:IPI01023209
UniGene:Mm.27913 PDB:2YQD PDBsum:2YQD ProteinModelPortal:Q8BSQ9
SMR:Q8BSQ9 DIP:DIP-48885N IntAct:Q8BSQ9 STRING:Q8BSQ9
PhosphoSite:Q8BSQ9 PaxDb:Q8BSQ9 PRIDE:Q8BSQ9
Ensembl:ENSMUST00000112094 Ensembl:ENSMUST00000112095
GeneTree:ENSGT00390000003017 EvolutionaryTrace:Q8BSQ9 Bgee:Q8BSQ9
Genevestigator:Q8BSQ9 GO:GO:0003349 Uniprot:Q8BSQ9
Length = 1634
Score = 621 (223.7 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 174/507 (34%), Positives = 264/507 (52%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV+ PID +KIQQKLK +EYDD++ AD +LL NAK +YK +S E++ A +L +L+
Sbjct: 87 VVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLR 146
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASET-EDSRDSSICTEDEQNQCEDLFNAVMTSTDAD 292
TRN+ + Q E + D T D E E L A++ +T+
Sbjct: 147 TRNEFV--QKGEADDEDDDEDGQDNQGTLADGSSPGYLKEI----LEQLLEAIVVATNPS 200
Query: 293 SRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNAC 352
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KNA
Sbjct: 201 GRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAK 260
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAALX 412
T+NEPGSQ++KDA ++KK+ KK EIE + T KS S RIR +L+A A L
Sbjct: 261 TYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMT---KS----SLRIRTASNLAA--ARLT 311
Query: 413 XXXXXXXXXXXXXXXXPNSPLWQVYDAIRNAKTQGVIFFF-FG--------VTAASLQK- 462
P S ++ A++ + + +G + AA ++
Sbjct: 312 GPSHNKSSLGEERN--PTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAALAAARYEEG 369
Query: 463 ----------MRI------LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPV 506
M + LY+T++ +C G+ ++ F LPS+ YPDYY+ I+ P+
Sbjct: 370 ESEAESITSFMDVSNPFHQLYDTVR-SCRNHQGQLIAEPFFHLPSKKKYPDYYQQIKMPI 428
Query: 507 DMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLR 566
++ I +KL+ +YE LD + D MF+NA +YN P+S IYK L LQ+++ K L
Sbjct: 429 SLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELA 488
Query: 567 EDEDSVPDVPAAVQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYR 626
+D + D + + TS S K+ N+ K+R+ L +++ R
Sbjct: 489 RRDD-IEDGDSMISSA-TSDTGSAKRKSKK--------NIR----KQRMKILFNVVLEAR 534
Query: 627 DQ-DGRQPMLMFMELPSAKIYPEYYKV 652
+ GR+ +FM PS K YP+YYK+
Sbjct: 535 EPGSGRRLCDLFMVKPSKKDYPDYYKI 561
Score = 362 (132.5 bits), Expect = 1.9e-73, Sum P(3) = 1.9e-73
Identities = 71/135 (52%), Positives = 96/135 (71%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
QK+ +Y +K + K GR+LS IF RLPSR + PDYY I+KP+DME I S + N+Y
Sbjct: 660 QKLNEVYEAVKNYTD-KRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKY 718
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VPDVPAAV 579
+ +D MV DF+ MF+NAC YNEP+S IYKDAL L +++L+T+ L DEDS VP+V +
Sbjct: 719 QDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLI 778
Query: 580 QELLTSLFTSVYNHQ 594
QEL+ +LF SV +HQ
Sbjct: 779 QELIHNLFVSVMSHQ 793
Score = 287 (106.1 bits), Expect = 1.9e-73, Sum P(3) = 1.9e-73
Identities = 68/205 (33%), Positives = 115/205 (56%)
Query: 178 PIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
PI +I+ KLK EY+ L + D+ L+ +NAK + NS ++ +L ++ + + +
Sbjct: 427 PISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKE 486
Query: 238 LLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE--QNQCEDLFNAVMTSTDADS-R 294
L E D M++S T D+ + ++ + + + LFN V+ + + S R
Sbjct: 487 LARRDDIEDG------DSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR 540
Query: 295 PLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTF 354
L ++F + PSKK YP+YY +I P+DL+ I I++ KYA M +D+ LM +NA +
Sbjct: 541 RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMMEDMKLMFRNARHY 600
Query: 355 NEPGSQIYKDAKALKKLVQTKKMEI 379
NE GSQ+Y DA L+KL++ K+ E+
Sbjct: 601 NEEGSQVYNDAHILEKLLKDKRKEL 625
Score = 269 (99.8 bits), Expect = 7.5e-42, Sum P(3) = 7.5e-42
Identities = 64/215 (29%), Positives = 106/215 (49%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+ ++ D+Y D++L+ +NA+ + + SQ + DA L +L
Sbjct: 561 IILEPMDLKIIEHNIRNDKYAGEEGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKD 620
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
R K L P + + S + S T +Q + +++ AV TD
Sbjct: 621 KR-KELGPLPDDDDMASPKLKLSRKSGVSPKK-SKYMTPMQQ-KLNEVYEAVKNYTDKRG 677
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R L +F LPS+ P+YY I P+D+ I + KY + M +D ++M NACT
Sbjct: 678 RRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACT 737
Query: 354 FNEPGSQIYKDAKALKK-LVQTKK-MEIEQGKFTP 386
+NEP S IYKDA L K L++T++ +E ++ P
Sbjct: 738 YNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVP 772
Score = 256 (95.2 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 62/191 (32%), Positives = 108/191 (56%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
Q+M+IL+N + E EP +GR+L +F PS+ DYPDYY++I +P+D+++I +R ++Y
Sbjct: 521 QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKY 580
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVP-AAV 579
+ M+ D MF NA YNE S +Y DA L+++ L+ K R++ +PD A
Sbjct: 581 AGEEGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKL-LKDK---RKELGPLPDDDDMAS 636
Query: 580 QELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFME 639
+L S + V + + + P++++L + + + +Y D+ GR+ +F+
Sbjct: 637 PKLKLSRKSGVSPKKSKYM----------TPMQQKLNEVYEAVKNYTDKRGRRLSAIFLR 686
Query: 640 LPSAKIYPEYY 650
LPS P+YY
Sbjct: 687 LPSRSELPDYY 697
Score = 224 (83.9 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+DP ++Y+ IR++K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK
Sbjct: 44 VDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKM 103
Query: 158 DEYDDLSDFQADIELL 173
+EYDD++ AD +LL
Sbjct: 104 EEYDDVNLLTADFQLL 119
Score = 207 (77.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 60/188 (31%), Positives = 94/188 (50%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNTI++ + + GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++
Sbjct: 53 LYNTIRDY-KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNL 111
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMH-LREDEDSVPDVPAAVQELLT 584
+ ADF +F+NA Y +PDS YK A L + L+T+ +++ E D Q+
Sbjct: 112 LTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQD--- 168
Query: 585 SLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAK 644
N GS LK L L + ++ + GR +F +LPS
Sbjct: 169 -------NQGTLADGS------SPGYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKV 215
Query: 645 IYPEYYKV 652
YP+YY +
Sbjct: 216 QYPDYYAI 223
Score = 165 (63.1 bits), Expect = 7.0e-42, Sum P(2) = 7.0e-42
Identities = 52/185 (28%), Positives = 90/185 (48%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ Q+YD +R+ + G L+ +PF +P K++ P Y++ + PI +I+ KLK
Sbjct: 380 MDVSNPFHQLYDTVRSCRNHQGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKN 439
Query: 158 DEYDDLSDFQADIELLV-------VTNPIDF---IKIQQKL--KTDEY---DDLSDFQAD 202
EY+ L + D+ L+ V N + +K+QQ + K E DD+ D +
Sbjct: 440 QEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSM 499
Query: 203 IELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMD-FMMASET 261
I + + KR S+++ Q + LF N +L ++ E S +R D FM+
Sbjct: 500 ISSATSDTGSA-KRKSKKNIRKQRMKILF----NVVL--EAREPGSGRRLCDLFMVKPSK 552
Query: 262 EDSRD 266
+D D
Sbjct: 553 KDYPD 557
Score = 152 (58.6 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 36/120 (30%), Positives = 64/120 (53%)
Query: 265 RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRT 324
R S++ T D C +L+N + D R L E+F P ++ P+YY+V+ PIDL
Sbjct: 37 RLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMK 96
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL-VQTKKMEIEQGK 383
I ++++ +Y + + D L+ NA + +P S YK A L L ++T+ +++G+
Sbjct: 97 IQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGE 156
Score = 115 (45.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 20/83 (24%), Positives = 44/83 (53%)
Query: 93 PKRKK-IDP-SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIK 150
PK+ K + P + ++Y+ ++N+ + G L F+R+P + + P Y+ + P+D K
Sbjct: 649 PKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEK 708
Query: 151 IQQKLKTDEYDDLSDFQADIELL 173
I+ + ++Y D+ D ++
Sbjct: 709 IRSHMMANKYQDIDSMVEDFVMM 731
Score = 103 (41.3 bits), Expect = 8.8e-61, Sum P(3) = 8.8e-61
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
+ ++Q+ + I G L+ + F ++P K Q P Y+ ++ PID I Q+++ Y
Sbjct: 184 EILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYK 243
Query: 162 DLSDFQADIELL 173
+ DI+LL
Sbjct: 244 SIHAMAKDIDLL 255
Score = 102 (41.0 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 94 KRKKIDPSDAMQQIYDVIRNFKKE-DGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQ 152
K KK M+ +++V+ ++ G LCD F+ P K+ P Y++++ P+D I+
Sbjct: 513 KSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIE 572
Query: 153 QKLKTDEYDDLSDFQADIELL 173
++ D+Y D++L+
Sbjct: 573 HNIRNDKYAGEEGMMEDMKLM 593
Score = 89 (36.4 bits), Expect = 6.7e-44, Sum P(3) = 6.7e-44
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++I + N+Y LD ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 817 KPPLTFDIIRKNVESNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIRIR 876
Query: 563 MHL 565
L
Sbjct: 877 DEL 879
Score = 84 (34.6 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 173 LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFH 232
L + P+D KI+ + ++Y D+ D ++ NA T+ + S ++DA L ++
Sbjct: 698 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLL 757
Query: 233 STRNKLLNPQ-SH 244
TR L + SH
Sbjct: 758 ETRRDLEGDEDSH 770
Score = 66 (28.3 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 38/190 (20%), Positives = 76/190 (40%)
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGT 247
L+ +L D+ I+ + K + +++D ++E F N E
Sbjct: 685 LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL 744
Query: 248 SQKRSMDF-MMASET----EDSRDSSI--CTEDEQNQCEDLFNAVMTSTDADSRPLHEVF 300
K ++ + ET E DS + T Q +LF +VM+ D + R +
Sbjct: 745 IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL 804
Query: 301 QLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
+P+ P + + D+ I + ++ +Y L ++ + + + A N S+
Sbjct: 805 AEIPAVD--PNSPNKPPLTFDI--IRKNVESNRYRRLDLFQEHMFEVLERARRMNRTDSE 860
Query: 361 IYKDAKALKK 370
IY+DA L++
Sbjct: 861 IYEDAVELQQ 870
Score = 39 (18.8 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 602 HVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPS 642
HV NV ++ ++ L +M ++D +GR E+P+
Sbjct: 770 HVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPA 809
Score = 38 (18.4 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIEQGK 383
T +EP YK L L +T M GK
Sbjct: 1202 TEHEPTKMFYKKEVFLSNLEETCPMSCILGK 1232
>UNIPROTKB|Q86U86 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0001890 "placenta
development" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0003682 "chromatin binding" evidence=NAS] [GO:0007067 "mitosis"
evidence=TAS] [GO:0000228 "nuclear chromosome" evidence=NAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 Pfam:PF00505
GO:GO:0008285 GO:GO:0007507 GO:GO:0000776 GO:GO:0007067
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001890 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 GO:GO:0000228
MIM:144700 CTD:55193 HOVERGEN:HBG079860 KO:K11757 EMBL:AF197569
EMBL:AF225870 EMBL:AF225871 EMBL:AF225872 EMBL:AF177387
EMBL:AY281068 EMBL:BC115009 EMBL:BC115010 EMBL:BC115011
EMBL:BC129934 EMBL:BC129935 EMBL:AK056541 IPI:IPI00023097
IPI:IPI00301041 IPI:IPI00334894 IPI:IPI00384176 IPI:IPI00398781
IPI:IPI00640304 IPI:IPI00873041 IPI:IPI00909142 IPI:IPI00910435
RefSeq:NP_060783.3 UniGene:Hs.189920 UniGene:Hs.476320 PDB:2KTB
PDB:3G0J PDB:3HMF PDB:3IU5 PDB:3IU6 PDB:3K2J PDB:3LJW PDB:3MB4
PDB:3TLP PDBsum:2KTB PDBsum:3G0J PDBsum:3HMF PDBsum:3IU5
PDBsum:3IU6 PDBsum:3K2J PDBsum:3LJW PDBsum:3MB4 PDBsum:3TLP
ProteinModelPortal:Q86U86 SMR:Q86U86 DIP:DIP-33045N IntAct:Q86U86
MINT:MINT-1195749 STRING:Q86U86 PhosphoSite:Q86U86 DMDM:73921624
PaxDb:Q86U86 PRIDE:Q86U86 Ensembl:ENST00000296302
Ensembl:ENST00000337303 Ensembl:ENST00000356770
Ensembl:ENST00000394830 Ensembl:ENST00000409057
Ensembl:ENST00000409114 Ensembl:ENST00000409767
Ensembl:ENST00000410007 Ensembl:ENST00000412587 GeneID:55193
KEGG:hsa:55193 UCSC:uc003deq.2 UCSC:uc003der.2 UCSC:uc003des.2
UCSC:uc003det.2 UCSC:uc003deu.2 UCSC:uc003dew.2 UCSC:uc003dey.2
UCSC:uc010hmk.1 GeneCards:GC03M052579 H-InvDB:HIX0003364
HGNC:HGNC:30064 HPA:HPA015629 MIM:606083 neXtProt:NX_Q86U86
PharmGKB:PA162398846 InParanoid:Q86U86 OMA:WLKVGDC PhylomeDB:Q86U86
ChEMBL:CHEMBL1795184 ChiTaRS:PBRM1 EvolutionaryTrace:Q86U86
GenomeRNAi:55193 NextBio:59051 ArrayExpress:Q86U86 Bgee:Q86U86
Genevestigator:Q86U86 GermOnline:ENSG00000163939 Uniprot:Q86U86
Length = 1689
Score = 621 (223.7 bits), Expect = 1.4e-79, Sum P(2) = 1.4e-79
Identities = 164/495 (33%), Positives = 254/495 (51%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV+ PID +KIQQKLK +EYDD++ AD +LL NAK++YK +S E++ A +L +L+
Sbjct: 87 VVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLR 146
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
TRN+ + + + TE S + + + E L A++ +T+
Sbjct: 147 TRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPAYL-----KEILEQLLEAIVVATNPSG 201
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KNA T
Sbjct: 202 RLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKT 261
Query: 354 FNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSK----RIRGGQ----SLS 405
+NEPGSQ++KDA ++KK+ KK EIE + + R S R+ G SL
Sbjct: 262 YNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLG 321
Query: 406 AITAALXXXXXXXXXXXXXXXXXPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQK-MR 464
L ++ +A + A S+ M
Sbjct: 322 EERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMD 381
Query: 465 I------LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYN 518
+ LY+T++ +C G+ ++ F LPS+ YPDYY+ I+ P+ ++ I +KL+
Sbjct: 382 VSNPFYQLYDTVR-SCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQ 440
Query: 519 QYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAA 578
+YE LD + D MF+NA +YN P+S IYK L LQ+++ K L +D + D +
Sbjct: 441 EYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDD-IEDGDSM 499
Query: 579 VQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQ-DGRQPMLMF 637
+ TS S K+ N+ K+R+ L +++ R+ GR+ +F
Sbjct: 500 ISSA-TSDTGSAKRKSKK--------NIR----KQRMKILFNVVLEAREPGSGRRLCDLF 546
Query: 638 MELPSAKIYPEYYKV 652
M PS K YP+YYK+
Sbjct: 547 MVKPSKKDYPDYYKI 561
Score = 362 (132.5 bits), Expect = 2.7e-73, Sum P(3) = 2.7e-73
Identities = 71/135 (52%), Positives = 96/135 (71%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
QK+ +Y +K + K GR+LS IF RLPSR + PDYY I+KP+DME I S + N+Y
Sbjct: 660 QKLNEVYEAVKNYTD-KRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKY 718
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VPDVPAAV 579
+ +D MV DF+ MF+NAC YNEP+S IYKDAL L +++L+T+ L DEDS VP+V +
Sbjct: 719 QDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLI 778
Query: 580 QELLTSLFTSVYNHQ 594
QEL+ +LF SV +HQ
Sbjct: 779 QELIHNLFVSVMSHQ 793
Score = 286 (105.7 bits), Expect = 2.7e-73, Sum P(3) = 2.7e-73
Identities = 68/205 (33%), Positives = 115/205 (56%)
Query: 178 PIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
PI +I+ KLK EY+ L + D+ L+ +NAK + NS ++ +L ++ + + +
Sbjct: 427 PISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKE 486
Query: 238 LLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE--QNQCEDLFNAVMTSTDADS-R 294
L E D M++S T D+ + ++ + + + LFN V+ + + S R
Sbjct: 487 LARRDDIEDG------DSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR 540
Query: 295 PLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTF 354
L ++F + PSKK YP+YY +I P+DL+ I I++ KYA M +D+ LM +NA +
Sbjct: 541 RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY 600
Query: 355 NEPGSQIYKDAKALKKLVQTKKMEI 379
NE GSQ+Y DA L+KL++ K+ E+
Sbjct: 601 NEEGSQVYNDAHILEKLLKEKRKEL 625
Score = 265 (98.3 bits), Expect = 2.4e-41, Sum P(3) = 2.4e-41
Identities = 64/215 (29%), Positives = 106/215 (49%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+ ++ D+Y D++L+ +NA+ + + SQ + DA L +L
Sbjct: 561 IILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKE 620
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
R K L P + + S + S T +Q + +++ AV TD
Sbjct: 621 KR-KELGPLPDDDDMASPKLKLSRKSGISPKK-SKYMTPMQQ-KLNEVYEAVKNYTDKRG 677
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R L +F LPS+ P+YY I P+D+ I + KY + M +D ++M NACT
Sbjct: 678 RRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACT 737
Query: 354 FNEPGSQIYKDAKALKK-LVQTKK-MEIEQGKFTP 386
+NEP S IYKDA L K L++T++ +E ++ P
Sbjct: 738 YNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVP 772
Score = 258 (95.9 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 59/190 (31%), Positives = 105/190 (55%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
Q+M+IL+N + E EP +GR+L +F PS+ DYPDYY++I +P+D+++I +R ++Y
Sbjct: 521 QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKY 580
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQ 580
+ M+ D MF NA YNE S +Y DA L++++ + + L D D A
Sbjct: 581 AGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPD---DDDMASP 637
Query: 581 ELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMEL 640
+L S + + + + + P++++L + + + +Y D+ GR+ +F+ L
Sbjct: 638 KLKLSRKSGISPKKSKYM----------TPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRL 687
Query: 641 PSAKIYPEYY 650
PS P+YY
Sbjct: 688 PSRSELPDYY 697
Score = 224 (83.9 bits), Expect = 1.4e-79, Sum P(2) = 1.4e-79
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+DP ++Y+ IR++K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK
Sbjct: 44 VDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKM 103
Query: 158 DEYDDLSDFQADIELL 173
+EYDD++ AD +LL
Sbjct: 104 EEYDDVNLLTADFQLL 119
Score = 210 (79.0 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 60/188 (31%), Positives = 94/188 (50%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNTI++ + + GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++
Sbjct: 53 LYNTIRDY-KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNL 111
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMH-LREDEDSVPDVPAAVQELLT 584
+ ADF +F+NA Y +PDS YK A L + L+T+ +++ E D Q+
Sbjct: 112 LTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQD--- 168
Query: 585 SLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAK 644
N GS LK L L + ++ + GR +F +LPS
Sbjct: 169 -------NQGTVTEGSSPAY------LKEILEQLLEAIVVATNPSGRLISELFQKLPSKV 215
Query: 645 IYPEYYKV 652
YP+YY +
Sbjct: 216 QYPDYYAI 223
Score = 163 (62.4 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 52/185 (28%), Positives = 90/185 (48%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ Q+YD +R+ + G L+ +PF +P K++ P Y++ + PI +I+ KLK
Sbjct: 380 MDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKN 439
Query: 158 DEYDDLSDFQADIELLV-------VTNPIDF---IKIQQKL--KTDEY---DDLSDFQAD 202
EY+ L + D+ L+ V N + +K+QQ + K E DD+ D +
Sbjct: 440 QEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSM 499
Query: 203 IELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMD-FMMASET 261
I + + KR S+++ Q + LF N +L ++ E S +R D FM+
Sbjct: 500 ISSATSDTGSA-KRKSKKNIRKQRMKILF----NVVL--EAREPGSGRRLCDLFMVKPSK 552
Query: 262 EDSRD 266
+D D
Sbjct: 553 KDYPD 557
Score = 153 (58.9 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 36/120 (30%), Positives = 65/120 (54%)
Query: 265 RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRT 324
R S++ T D C +L+N + D R L E+F P ++ P+YY+V+ PIDL
Sbjct: 37 RLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMK 96
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL-VQTKKMEIEQGK 383
I ++++ +Y + + D L+ NA ++ +P S YK A L L ++T+ +++G+
Sbjct: 97 IQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGE 156
Score = 115 (45.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/83 (24%), Positives = 44/83 (53%)
Query: 93 PKRKK-IDP-SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIK 150
PK+ K + P + ++Y+ ++N+ + G L F+R+P + + P Y+ + P+D K
Sbjct: 649 PKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEK 708
Query: 151 IQQKLKTDEYDDLSDFQADIELL 173
I+ + ++Y D+ D ++
Sbjct: 709 IRSHMMANKYQDIDSMVEDFVMM 731
Score = 103 (41.3 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
+ ++Q+ + I G L+ + F ++P K Q P Y+ ++ PID I Q+++ Y
Sbjct: 184 EILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYK 243
Query: 162 DLSDFQADIELL 173
+ DI+LL
Sbjct: 244 SIHAMAKDIDLL 255
Score = 99 (39.9 bits), Expect = 6.5e-35, Sum P(2) = 6.5e-35
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 94 KRKKIDPSDAMQQIYDVIRNFKKE-DGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQ 152
K KK M+ +++V+ ++ G LCD F+ P K+ P Y++++ P+D I+
Sbjct: 513 KSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIE 572
Query: 153 QKLKTDEYDDLSDFQADIELL 173
++ D+Y D++L+
Sbjct: 573 HNIRNDKYAGEEGMIEDMKLM 593
Score = 89 (36.4 bits), Expect = 1.0e-43, Sum P(3) = 1.0e-43
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++I + N+Y LD ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 817 KPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIR 876
Query: 563 MHL 565
L
Sbjct: 877 DEL 879
Score = 84 (34.6 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 173 LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFH 232
L + P+D KI+ + ++Y D+ D ++ NA T+ + S ++DA L ++
Sbjct: 698 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLL 757
Query: 233 STRNKLLNPQ-SH 244
TR L + SH
Sbjct: 758 ETRRDLEGDEDSH 770
Score = 72 (30.4 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 38/190 (20%), Positives = 78/190 (41%)
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGT 247
L+ +L D+ I+ + K + +++D ++E F N E
Sbjct: 685 LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL 744
Query: 248 SQKRSMDF-MMASET----EDSRDSSI--CTEDEQNQCEDLFNAVMTSTDADSRPLHEVF 300
K ++ + ET E DS + T Q +LF +VM+ D + R +
Sbjct: 745 IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL 804
Query: 301 QLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
+P+ P + + + D+ I + +++ +Y L ++ + + + A N S+
Sbjct: 805 AEIPAVD--PNFPNKPPLTFDI--IRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSE 860
Query: 361 IYKDAKALKK 370
IY+DA L++
Sbjct: 861 IYEDAVELQQ 870
Score = 43 (20.2 bits), Expect = 6.2e-39, Sum P(3) = 6.2e-39
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 462 KMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYE 521
K + ++ I++ E R+L +FQ H +EV+ + M S++ YE
Sbjct: 817 KPPLTFDIIRKNVENNRYRRLD-LFQE----H----MFEVLERARRMNRTDSEI----YE 863
Query: 522 HLDEMVADFIQMFDNACKYNE 542
E+ FI++ D CK E
Sbjct: 864 DAVELQQFFIKIRDELCKNGE 884
Score = 39 (18.8 bits), Expect = 1.6e-38, Sum P(3) = 1.6e-38
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 602 HVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPS 642
HV NV ++ ++ L +M ++D +GR E+P+
Sbjct: 770 HVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPA 809
Score = 37 (18.1 bits), Expect = 6.4e-17, Sum P(3) = 6.4e-17
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIEQGK 383
T +EP YK L L +T M GK
Sbjct: 1202 TEHEPTKMFYKKEVFLSNLEETCPMTCILGK 1232
>UNIPROTKB|E1BNH8 [details] [associations]
symbol:E1BNH8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001890 "placenta
development" evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 Pfam:PF00505 GO:GO:0008285 GO:GO:0007507
GO:GO:0000776 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001890
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 OMA:WLKVGDC GeneTree:ENSGT00390000003017
EMBL:DAAA02054367 IPI:IPI00699896 Ensembl:ENSBTAT00000019672
Uniprot:E1BNH8
Length = 1664
Score = 619 (223.0 bits), Expect = 2.1e-79, Sum P(2) = 2.1e-79
Identities = 164/495 (33%), Positives = 254/495 (51%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV+ PID +KIQQKLK +EYDD++ AD +LL NAK +YK +S E++ A +L +L+
Sbjct: 87 VVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLR 146
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
TRN+ + + + TE S + + E L A++ +T+
Sbjct: 147 TRNEFVQKGEADDEDDDEDGQDSQGAVTEGSSPGYL-----KEILEQLLEAIVVATNPSG 201
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KNA T
Sbjct: 202 RLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKT 261
Query: 354 FNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAG----KSERIRSKRIRGGQ----SLS 405
+NEPGSQ++KDA ++KK+ KK EIE + T + S + + R+ G SL
Sbjct: 262 YNEPGSQVFKDANSIKKIFYMKKAEIEH-EMTKSSLRMRTSSNLAATRLTGPSHSKGSLG 320
Query: 406 AITAALXXXXXXXXXXXXXXXXXPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQK-MR 464
L ++ +A + A S+ M
Sbjct: 321 EERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMD 380
Query: 465 I------LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYN 518
+ LY+T++ +C G+ ++ F LPS+ YPDYY+ I+ P+ ++ I +KL+
Sbjct: 381 VSNPFYQLYDTVR-SCRNNQGQLIAEPFFHLPSKKKYPDYYQQIKTPISLQQIRTKLKNQ 439
Query: 519 QYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAA 578
+YE LD + D MF+NA +YN P+S IYK L LQ+++ K L +D + D +
Sbjct: 440 EYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDD-IEDGDSM 498
Query: 579 VQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQ-DGRQPMLMF 637
+ TS S K+ N+ K+R+ L +++ R+ GR+ +F
Sbjct: 499 ISSA-TSDTGSAKRKSKK--------NIR----KQRMKILFNVVLEAREPGSGRRLCDLF 545
Query: 638 MELPSAKIYPEYYKV 652
M PS K YP+YYK+
Sbjct: 546 MVKPSKKDYPDYYKI 560
Score = 288 (106.4 bits), Expect = 3.7e-62, Sum P(3) = 3.7e-62
Identities = 68/208 (32%), Positives = 116/208 (55%)
Query: 175 VTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHST 234
+ PI +I+ KLK EY+ L + D+ L+ +NAK + NS ++ +L ++ +
Sbjct: 423 IKTPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAK 482
Query: 235 RNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE--QNQCEDLFNAVMTSTDAD 292
+ +L E D M++S T D+ + ++ + + + LFN V+ + +
Sbjct: 483 KKELARRDDIEDG------DSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPG 536
Query: 293 S-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNA 351
S R L ++F + PSKK YP+YY +I P+DL+ I I++ KYA M +D+ LM +NA
Sbjct: 537 SGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNA 596
Query: 352 CTFNEPGSQIYKDAKALKKLVQTKKMEI 379
+NE GSQ+Y DA L+KL++ K+ E+
Sbjct: 597 RHYNEEGSQVYNDAHILEKLLKDKRKEL 624
Score = 263 (97.6 bits), Expect = 3.7e-62, Sum P(3) = 3.7e-62
Identities = 54/126 (42%), Positives = 82/126 (65%)
Query: 471 KETCEPKTGRQLSHIFQRLPSRHD-YPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVAD 529
K PK + ++ + Q+L ++ +Y + + +DME I S + N+Y+ +D MV D
Sbjct: 643 KSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLDMEKIRSHMMANKYQDIDSMVED 702
Query: 530 FIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VPDVPAAVQELLTSLFT 588
F+ MF+NAC YNEP+S IYKDAL L +++L+T+ L DEDS VP+V +QEL+ +LF
Sbjct: 703 FVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFV 762
Query: 589 SVYNHQ 594
SV +HQ
Sbjct: 763 SVMSHQ 768
Score = 224 (83.9 bits), Expect = 2.1e-79, Sum P(2) = 2.1e-79
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+DP ++Y+ IR++K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK
Sbjct: 44 VDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKM 103
Query: 158 DEYDDLSDFQADIELL 173
+EYDD++ AD +LL
Sbjct: 104 EEYDDVNLLTADFQLL 119
Score = 221 (82.9 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 43/113 (38%), Positives = 71/113 (62%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
Q+M+IL+N + E EP +GR+L +F PS+ DYPDYY++I +P+D+++I +R ++Y
Sbjct: 520 QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKY 579
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLR---EDED 570
+ M+ D MF NA YNE S +Y DA L++++ + L +D+D
Sbjct: 580 AGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELGPLPDDDD 632
Score = 208 (78.3 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 61/192 (31%), Positives = 95/192 (49%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNTI++ + + GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++
Sbjct: 53 LYNTIRDY-KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNL 111
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHL-----REDEDSVPDVPAAVQ 580
+ ADF +F+NA Y +PDS YK A L + L+T+ +DED D + Q
Sbjct: 112 LTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDS-Q 170
Query: 581 ELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMEL 640
+T + Y LK L L + ++ + GR +F +L
Sbjct: 171 GAVTEGSSPGY-------------------LKEILEQLLEAIVVATNPSGRLISELFQKL 211
Query: 641 PSAKIYPEYYKV 652
PS YP+YY +
Sbjct: 212 PSKVQYPDYYAI 223
Score = 166 (63.5 bits), Expect = 9.4e-31, Sum P(2) = 9.4e-31
Identities = 52/185 (28%), Positives = 90/185 (48%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ Q+YD +R+ + G L+ +PF +P K++ P Y++ + PI +I+ KLK
Sbjct: 379 MDVSNPFYQLYDTVRSCRNNQGQLIAEPFFHLPSKKKYPDYYQQIKTPISLQQIRTKLKN 438
Query: 158 DEYDDLSDFQADIELLV-------VTNPIDF---IKIQQKL--KTDEY---DDLSDFQAD 202
EY+ L + D+ L+ V N + +K+QQ + K E DD+ D +
Sbjct: 439 QEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSM 498
Query: 203 IELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMD-FMMASET 261
I + + KR S+++ Q + LF N +L ++ E S +R D FM+
Sbjct: 499 ISSATSDTGSA-KRKSKKNIRKQRMKILF----NVVL--EAREPGSGRRLCDLFMVKPSK 551
Query: 262 EDSRD 266
+D D
Sbjct: 552 KDYPD 556
Score = 155 (59.6 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 37/120 (30%), Positives = 64/120 (53%)
Query: 265 RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRT 324
R SS+ T D C +L+N + D R L E+F P ++ P+YY+V+ PIDL
Sbjct: 37 RLSSLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMK 96
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL-VQTKKMEIEQGK 383
I ++++ +Y + + D L+ NA + +P S YK A L L ++T+ +++G+
Sbjct: 97 IQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGE 156
Score = 127 (49.8 bits), Expect = 7.4e-32, Sum P(4) = 7.4e-32
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 320 IDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKK-LVQTKK-M 377
+D+ I + KY + M +D ++M NACT+NEP S IYKDA L K L++T++ +
Sbjct: 679 LDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDL 738
Query: 378 EIEQGKFTP 386
E ++ P
Sbjct: 739 EGDEDSHVP 747
Score = 103 (41.3 bits), Expect = 1.6e-49, Sum P(3) = 1.6e-49
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
+ ++Q+ + I G L+ + F ++P K Q P Y+ ++ PID I Q+++ Y
Sbjct: 184 EILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYK 243
Query: 162 DLSDFQADIELL 173
+ DI+LL
Sbjct: 244 SIHAMAKDIDLL 255
Score = 99 (39.9 bits), Expect = 9.6e-24, Sum P(2) = 9.6e-24
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 94 KRKKIDPSDAMQQIYDVIRNFKKE-DGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQ 152
K KK M+ +++V+ ++ G LCD F+ P K+ P Y++++ P+D I+
Sbjct: 512 KSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIE 571
Query: 153 QKLKTDEYDDLSDFQADIELL 173
++ D+Y D++L+
Sbjct: 572 HNIRNDKYAGEEGMIEDMKLM 592
Score = 94 (38.1 bits), Expect = 7.4e-32, Sum P(4) = 7.4e-32
Identities = 32/142 (22%), Positives = 60/142 (42%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+ ++ D+Y D++L+ +NA+ + + SQ + DA L +L
Sbjct: 560 IILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKD 619
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
R K L P + + S + S T +Q + +++ AV TD
Sbjct: 620 KR-KELGPLPDDDDMASPKLKLSRKSGISPKK-SKYMTPMQQ-KLNEVYEAVKNYTDKRG 676
Query: 294 RPLHEVFQLLPSKKRYPEYYDV 315
R L + + S +Y D+
Sbjct: 677 RRLD--MEKIRSHMMANKYQDI 696
Score = 89 (36.4 bits), Expect = 5.6e-44, Sum P(3) = 5.6e-44
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++I + N+Y LD ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 792 KPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIR 851
Query: 563 MHL 565
L
Sbjct: 852 DEL 854
Score = 72 (30.4 bits), Expect = 4.8e-21, Sum P(3) = 4.8e-21
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 179 IDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKL 238
+D KI+ + ++Y D+ D ++ NA T+ + S ++DA L ++ TR L
Sbjct: 679 LDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDL 738
Query: 239 LNPQ-SH 244
+ SH
Sbjct: 739 EGDEDSH 745
Score = 71 (30.1 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 25/109 (22%), Positives = 52/109 (47%)
Query: 262 EDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPID 321
EDS ++ T Q +LF +VM+ D + R + +P+ P + + + D
Sbjct: 742 EDSHVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVD--PSFPNKPPLTFD 798
Query: 322 LRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKK 370
+ I + +++ +Y L ++ + + + A N S+IY+DA L++
Sbjct: 799 I--IRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQ 845
Score = 39 (18.8 bits), Expect = 8.9e-39, Sum P(3) = 8.9e-39
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 602 HVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPS 642
HV NV ++ ++ L +M ++D +GR E+P+
Sbjct: 745 HVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPA 784
Score = 37 (18.1 bits), Expect = 5.8e-18, Sum P(3) = 5.8e-18
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIEQGK 383
T +EP YK L L +T M GK
Sbjct: 1177 TEHEPTKMFYKKEVFLSNLEETCPMTCILGK 1207
>ZFIN|ZDB-GENE-010501-3 [details] [associations]
symbol:pbrm1l "polybromo 1, like" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR009071 InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
Pfam:PF00505 ZFIN:ZDB-GENE-010501-3 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00390000003017 EMBL:BX546446 EMBL:BX649498
IPI:IPI00993768 Ensembl:ENSDART00000131203 Uniprot:E7EZ71
Length = 1648
Score = 629 (226.5 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 159/429 (37%), Positives = 235/429 (54%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
+V+ PID +KIQQKL+ +EY D+ F AD LL+ N K +Y+ +S EHR A +L+ +F S
Sbjct: 86 IVSQPIDMMKIQQKLRAEEYQDVEQFSADFHLLINNTKAYYQADSAEHRAASKLLNVFLS 145
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQC------EDLFNAVMT 287
+N+LL Q +G ++ D E+ED+ +++ E+E+ E L A+ +
Sbjct: 146 AKNELL--QGGDG--EEAEDD----EESEDAENTNASMEEERPPSYLKAILEQLLEAIAS 197
Query: 288 STDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILM 347
TD+ R + E+FQ LPSK YP+YY VI PIDLR +A++IQ G Y S+ M KD+ L+
Sbjct: 198 CTDSSGRLVSELFQKLPSKLHYPDYYAVIKEPIDLRAVAQKIQGGHYKSISAMAKDIDLL 257
Query: 348 TKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIR-----------SK 396
KNA T+NEPGSQ++KDA +KK+ +K+EIEQ + P S RIR ++
Sbjct: 258 VKNAKTYNEPGSQVFKDANTIKKVFAQRKIEIEQAE--PTKTSLRIRQFFFSLKCFARNR 315
Query: 397 RIRGGQSLSAITAALXXXXXXXXXXXXXXXXXPNSPLWQVYDAIRNAKTQGVIFFFFGVT 456
R G LSAIT AL YD +T+ G++
Sbjct: 316 RSAQGDRLSAITMALQAGSESDEDSILTGTVR--------YDT---GETEADC----GLS 360
Query: 457 AASLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLR 516
A + +LY ++ + G LS F +LPSR +YPDYY I+ P+ ++ I K++
Sbjct: 361 AGD--PILLLYQAVRGARSVQ-GLLLSEPFLQLPSRREYPDYYHQIKNPISLQQIREKMK 417
Query: 517 YNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVP 576
YE ++++ AD MF+NA +YN P+S IYK A LQ I+ Q K D+D DV
Sbjct: 418 NGDYEAVEQIEADLSVMFENARRYNMPNSTIYKRAQRLQLIMQQQKKREFRDDDE-GDVS 476
Query: 577 AAVQELLTS 585
A ++ +S
Sbjct: 477 TANSDVGSS 485
Score = 292 (107.8 bits), Expect = 8.5e-62, Sum P(3) = 8.5e-62
Identities = 59/140 (42%), Positives = 88/140 (62%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
QK+ LY ++ + + GR+LS +F RLPSR + PDYY I++P+DME I S + +Y
Sbjct: 638 QKLSELYEAVRNFTDNR-GRRLSTVFLRLPSRSELPDYYAAIKRPIDMERIRSYMVQGRY 696
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVP------D 574
+ +D + DFI MF+NAC YNEP+S IY+DAL L R L+ + + E+E+
Sbjct: 697 QDVDSLAEDFILMFNNACTYNEPESLIYRDALLLHRAFLEARRRIEEEENGDEGGLGGLS 756
Query: 575 VPAAVQELLTSLFTSVYNHQ 594
V + V+EL+ +LF S+ HQ
Sbjct: 757 VASLVRELIRNLFVSMMGHQ 776
Score = 282 (104.3 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 62/208 (29%), Positives = 103/208 (49%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ +P+D I+ ++T+ Y++ D++L+ +NA+ + + SQ + DA ++E
Sbjct: 537 IIQDPMDMRTIENNIRTERYNNEDALMEDMKLMFRNARHYNEEGSQVYNDAN-VLEKMVK 595
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
+ K L P E + + + + I T Q + +L+ AV TD
Sbjct: 596 DKQKELGPAPEEDDVGSPKLKLRRSGVAVSPKKARIQTTPLQQKLSELYEAVRNFTDNRG 655
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R L VF LPS+ P+YY I PID+ I + G+Y + + +D ILM NACT
Sbjct: 656 RRLSTVFLRLPSRSELPDYYAAIKRPIDMERIRSYMVQGRYQDVDSLAEDFILMFNNACT 715
Query: 354 FNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
+NEP S IY+DA L + + IE+
Sbjct: 716 YNEPESLIYRDALLLHRAFLEARRRIEE 743
Score = 274 (101.5 bits), Expect = 8.5e-62, Sum P(3) = 8.5e-62
Identities = 69/236 (29%), Positives = 128/236 (54%)
Query: 175 VTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHST 234
+ NPI +I++K+K +Y+ + +AD+ ++ +NA+ + NS ++ AQ L +
Sbjct: 403 IKNPISLQQIREKMKNGDYEAVEQIEADLSVMFENARRYNMPNSTIYKRAQRLQLIMQQQ 462
Query: 235 RNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTST--DAD 292
+ + EG + D + S + S S ++N+ + L+ AV+T
Sbjct: 463 KKREFRDDD-EGDVSTANSD--VGSSKKKSHKKSA----KKNRMKMLY-AVLTDAREPGS 514
Query: 293 SRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNAC 352
R L ++F + P KK YP+YY +I P+D+RTI I+ +Y + + +D+ LM +NA
Sbjct: 515 GRRLCDLFMVKPLKKDYPDYYKIIQDPMDMRTIENNIRTERYNNEDALMEDMKLMFRNAR 574
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAIT 408
+NE GSQ+Y DA L+K+V+ K+ E+ G PA + + + S +++ +S A++
Sbjct: 575 HYNEEGSQVYNDANVLEKMVKDKQKEL--G---PAPEEDDVGSPKLKLRRSGVAVS 625
Score = 252 (93.8 bits), Expect = 4.3e-37, Sum P(2) = 4.3e-37
Identities = 62/196 (31%), Positives = 103/196 (52%)
Query: 457 AASLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLR 516
+A +M++LY + + EP +GR+L +F P + DYPDYY++I+ P+DM I + +R
Sbjct: 493 SAKKNRMKMLYAVLTDAREPGSGRRLCDLFMVKPLKKDYPDYYKIIQDPMDMRTIENNIR 552
Query: 517 YNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHL--REDEDSVPD 574
+Y + D ++ D MF NA YNE S +Y DA L+++V + L +ED D
Sbjct: 553 TERYNNEDALMEDMKLMFRNARHYNEEGSQVYNDANVLEKMVKDKQKELGPAPEED---D 609
Query: 575 VPAAVQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPM 634
V + +L S V K+ + PL+++L L + + ++ D GR+
Sbjct: 610 VGSPKLKLRRS---GVAVSPKKA-------RIQTTPLQQKLSELYEAVRNFTDNRGRRLS 659
Query: 635 LMFMELPSAKIYPEYY 650
+F+ LPS P+YY
Sbjct: 660 TVFLRLPSRSELPDYY 675
Score = 238 (88.8 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 73/287 (25%), Positives = 136/287 (47%)
Query: 104 MQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDL 163
++Q+ + I + G L+ + F ++P K P Y+ V+ PID + QK++ Y +
Sbjct: 188 LEQLLEAIASCTDSSGRLVSELFQKLPSKLHYPDYYAVIKEPIDLRAVAQKIQGGHYKSI 247
Query: 164 SDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRD 223
S DI+LLV K + + + D + I+ + K ++ ++ +
Sbjct: 248 SAMAKDIDLLVKN-----AKTYNEPGSQVFKDANT----IKKVFAQRKIEIEQ-AEPTKT 297
Query: 224 AQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSIC------TEDEQNQ 277
+ + + F S + N +S +G + ++ + + +E DS + T + +
Sbjct: 298 SLRIRQFFFSLKCFARNRRSAQG-DRLSAITMALQAGSESDEDSILTGTVRYDTGETEAD 356
Query: 278 CE----D----LFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRI 329
C D L+ AV + L E F LPS++ YP+YY I PI L+ I ++
Sbjct: 357 CGLSAGDPILLLYQAVRGARSVQGLLLSEPFLQLPSRREYPDYYHQIKNPISLQQIREKM 416
Query: 330 QDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKK 376
++G Y ++ +E DL +M +NA +N P S IYK A+ L+ ++Q +K
Sbjct: 417 KNGDYEAVEQIEADLSVMFENARRYNMPNSTIYKRAQRLQLIMQQQK 463
Score = 237 (88.5 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 64/175 (36%), Positives = 91/175 (52%)
Query: 479 GRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNAC 538
G LS F +LPSR +YPDYY I+ P+ ++ I K++ YE ++++ AD MF+NA
Sbjct: 380 GLLLSEPFLQLPSRREYPDYYHQIKNPISLQQIREKMKNGDYEAVEQIEADLSVMFENAR 439
Query: 539 KYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQELLTSLFTSVYNHQKQCL 598
+YN P+S IYK A LQ I+ Q K D+D DV A ++ +S S H+K
Sbjct: 440 RYNMPNSTIYKRAQRLQLIMQQQKKREFRDDDE-GDVSTANSDVGSSKKKS---HKKSAK 495
Query: 599 GSFHVLNVDNKPLKRRLYTLCKCLMDYRDQ-DGRQPMLMFMELPSAKIYPEYYKV 652
K R+ L L D R+ GR+ +FM P K YP+YYK+
Sbjct: 496 -------------KNRMKMLYAVLTDAREPGSGRRLCDLFMVKPLKKDYPDYYKI 537
Score = 211 (79.3 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 56/187 (29%), Positives = 89/187 (47%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNT+++ + + GRQ+ +F R P R + PDYYE++ +P+DM I KLR +Y+ +++
Sbjct: 52 LYNTVRDYKDDQ-GRQICELFVRAPKRRNQPDYYEIVSQPIDMMKIQQKLRAEEYQDVEQ 110
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQELLTS 585
ADF + +N Y + DS ++ A L + L K L + D E +
Sbjct: 111 FSADFHLLINNTKAYYQADSAEHRAASKLLNVFLSAKNELLQGGDGEEAEDDEESEDAEN 170
Query: 586 LFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKI 645
S+ + S+ LK L L + + D GR +F +LPS
Sbjct: 171 TNASMEEERPP---SY---------LKAILEQLLEAIASCTDSSGRLVSELFQKLPSKLH 218
Query: 646 YPEYYKV 652
YP+YY V
Sbjct: 219 YPDYYAV 225
Score = 205 (77.2 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 32/77 (41%), Positives = 53/77 (68%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D ++Y+ +R++K + G +C+ F+R PK+R +P Y+E+V+ PID +KIQQKL+
Sbjct: 43 VDQIAVCHELYNTVRDYKDDQGRQICELFVRAPKRRNQPDYYEIVSQPIDMMKIQQKLRA 102
Query: 158 DEYDDLSDFQADIELLV 174
+EY D+ F AD LL+
Sbjct: 103 EEYQDVEQFSADFHLLI 119
Score = 143 (55.4 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 36/151 (23%), Positives = 68/151 (45%)
Query: 233 STRNKLLNPQSH-EGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDA 291
S R + +P S G + S + R S+ + D+ C +L+N V D
Sbjct: 3 SKRRRATSPSSSASGGDFDDASSSTPVSGWKRRRASNAPSVDQIAVCHELYNTVRDYKDD 62
Query: 292 DSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNA 351
R + E+F P ++ P+YY+++ PID+ I ++++ +Y + D L+ N
Sbjct: 63 QGRQICELFVRAPKRRNQPDYYEIVSQPIDMMKIQQKLRAEEYQDVEQFSADFHLLINNT 122
Query: 352 CTFNEPGSQIYKDAKALKKLVQTKKMEIEQG 382
+ + S ++ A L + + K E+ QG
Sbjct: 123 KAYYQADSAEHRAASKLLNVFLSAKNELLQG 153
Score = 140 (54.3 bits), Expect = 8.3e-30, Sum P(3) = 8.3e-30
Identities = 21/76 (27%), Positives = 45/76 (59%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+ D + +Y +R + G LL +PF+++P +R+ P Y+ + NPI +I++K+K
Sbjct: 359 LSAGDPILLLYQAVRGARSVQGLLLSEPFLQLPSRREYPDYYHQIKNPISLQQIREKMKN 418
Query: 158 DEYDDLSDFQADIELL 173
+Y+ + +AD+ ++
Sbjct: 419 GDYEAVEQIEADLSVM 434
Score = 118 (46.6 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 93 PKRKKIDPSDAMQ---QIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFI 149
PK+ +I + Q ++Y+ +RNF G L F+R+P + + P Y+ + PID
Sbjct: 626 PKKARIQTTPLQQKLSELYEAVRNFTDNRGRRLSTVFLRLPSRSELPDYYAAIKRPIDME 685
Query: 150 KIQQKLKTDEYDDLSDFQADIELL 173
+I+ + Y D+ D L+
Sbjct: 686 RIRSYMVQGRYQDVDSLAEDFILM 709
Score = 113 (44.8 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 21/83 (25%), Positives = 46/83 (55%)
Query: 92 RPKRKKIDPSDAMQQIYDVIRNFKKE-DGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIK 150
+ KK + M+ +Y V+ + ++ G LCD F+ P K+ P Y++++ +P+D
Sbjct: 487 KKSHKKSAKKNRMKMLYAVLTDAREPGSGRRLCDLFMVKPLKKDYPDYYKIIQDPMDMRT 546
Query: 151 IQQKLKTDEYDDLSDFQADIELL 173
I+ ++T+ Y++ D++L+
Sbjct: 547 IENNIRTERYNNEDALMEDMKLM 569
Score = 67 (28.6 bits), Expect = 9.2e-14, Sum P(3) = 9.2e-14
Identities = 26/111 (23%), Positives = 50/111 (45%)
Query: 280 DLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGD 339
+LF ++M D + R + +P+ P D D P+ L I + G+Y L
Sbjct: 767 NLFVSMMGHQDDEGRCYSDSLAEVPAID--PANPD--DPPLTLEIIRNNVDSGRYRRLDV 822
Query: 340 MEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI-EQGKF--TPA 387
++ + + + A N S+I++D+ L+ + E+ + G+ TPA
Sbjct: 823 FQEHVFEVLEKARRLNRTDSEIFEDSVELQHFFVKIRDELCKNGEILLTPA 873
Score = 43 (20.2 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPD 544
RKP+ + + S L + E L+ AD + D+ ++ D
Sbjct: 1269 RKPIVPQKVPSPLLDKKIEELEAKFADMEDLDDDMDDLDDDD 1310
>UNIPROTKB|F1NLL8 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 Pfam:PF00505 GO:GO:0008285 GO:GO:0000776
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 IPI:IPI00571677 OMA:WLKVGDC
GeneTree:ENSGT00390000003017 EMBL:AADN02052994
Ensembl:ENSGALT00000002415 Uniprot:F1NLL8
Length = 1630
Score = 647 (232.8 bits), Expect = 4.6e-62, P = 4.6e-62
Identities = 179/511 (35%), Positives = 270/511 (52%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV+ PID +KIQQKLK +EYDD++ AD +LL NAK +YK +S E++ A +L EL+
Sbjct: 88 VVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLR 147
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
T+N+ + +G +++ D E DS++ S + E L AV +T+
Sbjct: 148 TKNEFVQ----KGDAEEEDED----EEGHDSQELS-SPGYLKEILEQLLEAVAVATNPSG 198
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KNA T
Sbjct: 199 RLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKT 258
Query: 354 FNEPGSQIYKDAKALKKLVQTKKMEIEQGKF--------TPA-------------GKS-- 390
+NEPGSQ++KDA A+KK+ KK EIE + TP+ GK
Sbjct: 259 YNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRLRTPSNLTASKLTGPSSQGKGSV 318
Query: 391 --ER------IRSKRIRGGQSLSAITAALXXXXXXXXXXXXXXXXXPNSPLWQVYDAIRN 442
ER R+KR G LSAIT AL Y+
Sbjct: 319 GDERNSSNKYFRNKRSAQGDRLSAITMALQYGSESDEDAALAAAAR--------YEGESE 370
Query: 443 AKTQGVIFFFFGVTAASLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVI 502
A++ I F + Q LY+T++ +C G+ +S F +LPS+ YPDYY+ I
Sbjct: 371 AES---ITSFMDTSNPLYQ----LYDTVR-SCRNNQGQLISEPFFQLPSKKKYPDYYQQI 422
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++ I +KL+ ++YE LD++ AD MF+NA +YN P+S IYK L +Q+++ K
Sbjct: 423 KTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKK 482
Query: 563 MHLREDEDSVPDVPAAVQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCL 622
L +D + D + + + +S +K N+ K+R+ L +
Sbjct: 483 KELARRDD-IEDGDSMISSATSDTGSSKRKSKK---------NMR----KQRMKILYNAV 528
Query: 623 MDYRDQD-GRQPMLMFMELPSAKIYPEYYKV 652
++ R+ GR+ +FM PS K YP+YYK+
Sbjct: 529 LEARESGTGRRLCDLFMVKPSKKDYPDYYKI 559
Score = 364 (133.2 bits), Expect = 1.0e-60, Sum P(3) = 1.0e-60
Identities = 71/135 (52%), Positives = 96/135 (71%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
QK+ +Y +K + K GR+LS IF RLPSR + PDYY I+KPVDME I S + N+Y
Sbjct: 658 QKLNEVYEAVKNYTD-KRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKY 716
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VPDVPAAV 579
+ +D MV DF+ MF+NAC YNEP+S IYKDAL L +++L+T+ + DEDS VP+V +
Sbjct: 717 QDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLLI 776
Query: 580 QELLTSLFTSVYNHQ 594
QEL+ +LF SV +HQ
Sbjct: 777 QELIHNLFVSVMSHQ 791
Score = 284 (105.0 bits), Expect = 1.0e-60, Sum P(3) = 1.0e-60
Identities = 66/208 (31%), Positives = 117/208 (56%)
Query: 175 VTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHST 234
+ PI +I+ KLK EY+ L +AD+ L+ +NAK + NS ++ ++ ++ +
Sbjct: 422 IKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAK 481
Query: 235 RNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE--QNQCEDLFNAVMTSTDAD 292
+ +L E D M++S T D+ S ++ + + + L+NAV+ + ++
Sbjct: 482 KKELARRDDIEDG------DSMISSATSDTGSSKRKSKKNMRKQRMKILYNAVLEARESG 535
Query: 293 S-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNA 351
+ R L ++F + PSKK YP+YY +I P+DL+ I I++ KY M D+ LM +NA
Sbjct: 536 TGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNA 595
Query: 352 CTFNEPGSQIYKDAKALKKLVQTKKMEI 379
+NE GSQ+Y DA L+K+++ K+ E+
Sbjct: 596 RHYNEEGSQVYNDAHMLEKILKEKRKEL 623
Score = 269 (99.8 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 62/208 (29%), Positives = 104/208 (50%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+ ++ D+Y D++L+ +NA+ + + SQ + DA L ++
Sbjct: 559 IILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKE 618
Query: 234 TRNKLLN-PQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDAD 292
R +L P+ + S K ++ ++ S S Q + +++ AV TD
Sbjct: 619 KRKELGPLPEDDDVASPK----LKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKR 674
Query: 293 SRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNAC 352
R L +F LPS+ P+YY I P+D+ I + KY + M +D ++M NAC
Sbjct: 675 GRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNAC 734
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIE 380
T+NEP S IYKDA L K++ + EIE
Sbjct: 735 TYNEPESLIYKDALVLHKVLLETRREIE 762
Score = 264 (98.0 bits), Expect = 8.3e-38, Sum P(2) = 8.3e-38
Identities = 64/191 (33%), Positives = 106/191 (55%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
Q+M+ILYN + E E TGR+L +F PS+ DYPDYY++I +P+D++MI +R ++Y
Sbjct: 519 QRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKY 578
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLRE-DEDSVPDVPAAV 579
+ M+ D MF NA YNE S +Y DA L++I+ + + L ED DV A
Sbjct: 579 VGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDD--DV--AS 634
Query: 580 QELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFME 639
+L S + + + + + P++++L + + + +Y D+ GR+ +F+
Sbjct: 635 PKLKLSRKSGISPKKSKYM----------TPMQQKLNEVYEAVKNYTDKRGRRLSAIFLR 684
Query: 640 LPSAKIYPEYY 650
LPS P+YY
Sbjct: 685 LPSRSELPDYY 695
Score = 232 (86.7 bits), Expect = 3.6e-49, Sum P(2) = 3.6e-49
Identities = 60/173 (34%), Positives = 84/173 (48%)
Query: 60 MG-KRRRAXXXXXXXXXXXXXXXXXXXXXXMQTRPKRK-----KIDPSDAMQQIYDVIRN 113
MG KRRRA +R +R+ +DP ++Y+ IR+
Sbjct: 1 MGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRD 60
Query: 114 FKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
+K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK +EYDD++ AD +LL
Sbjct: 61 YKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLL 120
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQE 226
N K K + EY EL ++ F ++ E D E
Sbjct: 121 F-NNA----KAYYKPDSPEYKAACKLW---ELYLRTKNEFVQKGDAEEEDEDE 165
Score = 207 (77.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 42/106 (39%), Positives = 65/106 (61%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNTI++ + + GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++
Sbjct: 54 LYNTIRDY-KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNV 112
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
+ ADF +F+NA Y +PDS YK A L + L+TK + D+
Sbjct: 113 LTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDA 158
Score = 171 (65.3 bits), Expect = 9.4e-43, Sum P(2) = 9.4e-43
Identities = 50/184 (27%), Positives = 91/184 (49%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ + Q+YD +R+ + G L+ +PF ++P K++ P Y++ + PI +I+ KLK
Sbjct: 378 MDTSNPLYQLYDTVRSCRNNQGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKN 437
Query: 158 DEYDDLSDFQADIELLV-------VTNPIDF---IKIQQKL--KTDEY---DDLSDFQAD 202
EY+ L +AD+ L+ V N + +K+QQ + K E DD+ D +
Sbjct: 438 HEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSM 497
Query: 203 IELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETE 262
I + + KR S+++ Q + L+ N +L + GT ++ FM+ +
Sbjct: 498 ISSATSDTGSS-KRKSKKNMRKQRMKILY----NAVLEARE-SGTGRRLCDLFMVKPSKK 551
Query: 263 DSRD 266
D D
Sbjct: 552 DYPD 555
Score = 157 (60.3 bits), Expect = 2.8e-41, Sum P(2) = 2.8e-41
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 265 RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRT 324
R S++ T D C +L+N + D R L E+F P ++ P+YY+V+ PIDL
Sbjct: 38 RLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMK 97
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL-VQTKKMEIEQG 382
I ++++ +Y + + D L+ NA + +P S YK A L +L ++TK +++G
Sbjct: 98 IQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKG 156
Score = 117 (46.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 20/83 (24%), Positives = 44/83 (53%)
Query: 93 PKRKK-IDP-SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIK 150
PK+ K + P + ++Y+ ++N+ + G L F+R+P + + P Y+ + P+D K
Sbjct: 647 PKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEK 706
Query: 151 IQQKLKTDEYDDLSDFQADIELL 173
I+ + ++Y D+ D ++
Sbjct: 707 IRSHMMANKYQDIDSMVEDFVMM 729
Score = 103 (41.3 bits), Expect = 1.0e-60, Sum P(3) = 1.0e-60
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
+ ++Q+ + + G L+ + F ++P K Q P Y+ ++ PID I Q+++ Y
Sbjct: 181 EILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYK 240
Query: 162 DLSDFQADIELL 173
+ DI+LL
Sbjct: 241 SIHAMAKDIDLL 252
Score = 99 (39.9 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 91 TRPKRKKIDPSDAMQQIYDVIRNFKKED-GALLCDPFIRIPKKRQEPSYHEVVTNPIDFI 149
++ K KK M+ +Y+ + ++ G LCD F+ P K+ P Y++++ P+D
Sbjct: 508 SKRKSKKNMRKQRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLK 567
Query: 150 KIQQKLKTDEY 160
I+ ++ D+Y
Sbjct: 568 MIEHNIRNDKY 578
Score = 91 (37.1 bits), Expect = 3.5e-31, Sum P(3) = 3.5e-31
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++I + N+Y LD + ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 815 KPPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIR 874
Query: 563 MHL 565
L
Sbjct: 875 DEL 877
Score = 84 (34.6 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 173 LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFH 232
+ + P+D KI+ + ++Y D+ D ++ NA T+ + S ++DA L ++
Sbjct: 696 ITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLL 755
Query: 233 STRNKLLNPQ-SH 244
TR ++ + SH
Sbjct: 756 ETRREIEGDEDSH 768
Score = 79 (32.9 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 38/190 (20%), Positives = 80/190 (42%)
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGT 247
L+ +L D+ I+ V K + +++D ++E F N E
Sbjct: 683 LRLPSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL 742
Query: 248 SQKRSM---DFMMAS--ETEDSRDSSI--CTEDEQNQCEDLFNAVMTSTDADSRPLHEVF 300
K ++ ++ + E E DS + T Q +LF +VM+ D + R +
Sbjct: 743 IYKDALVLHKVLLETRREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL 802
Query: 301 QLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
+P+ P + + + D+ I + +++ +Y L ++++ + + A N S+
Sbjct: 803 AEIPAVD--PNFPNKPPLTFDI--IRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSE 858
Query: 361 IYKDAKALKK 370
IY+DA L++
Sbjct: 859 IYEDAVELQQ 868
Score = 40 (19.1 bits), Expect = 6.6e-26, Sum P(3) = 6.6e-26
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 533 MFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVP 573
+F N K E + H D L ++ ++ +HL +D++ VP
Sbjct: 1098 VFANTDKAEE-EKH--SDTLDDSKVG-ESILHLEKDKEDVP 1134
Score = 39 (18.8 bits), Expect = 8.4e-26, Sum P(3) = 8.4e-26
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 602 HVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPS 642
HV NV ++ ++ L +M ++D +GR E+P+
Sbjct: 768 HVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPA 807
Score = 38 (18.4 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIEQGK 383
T +EP YK L L +T M GK
Sbjct: 1201 TEHEPTKMFYKKEVFLSNLEETCPMSCILGK 1231
>UNIPROTKB|Q90941 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0016568 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 EMBL:X90849
IPI:IPI00571677 PIR:JC5056 RefSeq:NP_990496.1 UniGene:Gga.3045
PDB:1W4S PDBsum:1W4S ProteinModelPortal:Q90941 SMR:Q90941
STRING:Q90941 PRIDE:Q90941 GeneID:396074 KEGG:gga:396074 CTD:55193
HOGENOM:HOG000045795 HOVERGEN:HBG079860 InParanoid:Q90941 KO:K11757
OrthoDB:EOG41NTK5 EvolutionaryTrace:Q90941 NextBio:20816133
Uniprot:Q90941
Length = 1633
Score = 647 (232.8 bits), Expect = 4.6e-62, P = 4.6e-62
Identities = 179/511 (35%), Positives = 270/511 (52%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV+ PID +KIQQKLK +EYDD++ AD +LL NAK +YK +S E++ A +L EL+
Sbjct: 88 VVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLR 147
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
T+N+ + +G +++ D E DS++ S + E L AV +T+
Sbjct: 148 TKNEFVQ----KGDAEEEDED----EEGHDSQELS-SPGYLKEILEQLLEAVAVATNPSG 198
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
R + E+FQ LPSK +YP+YY +I PIDL+TIA+RIQ+G Y S+ M KD+ L+ KNA T
Sbjct: 199 RLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKT 258
Query: 354 FNEPGSQIYKDAKALKKLVQTKKMEIEQGKF--------TPA-------------GKS-- 390
+NEPGSQ++KDA A+KK+ KK EIE + TP+ GK
Sbjct: 259 YNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRLRTPSNLTASKLTGPSSQGKGSV 318
Query: 391 --ER------IRSKRIRGGQSLSAITAALXXXXXXXXXXXXXXXXXPNSPLWQVYDAIRN 442
ER R+KR G LSAIT AL Y+
Sbjct: 319 GDERNSSNKYFRNKRSAQGDRLSAITMALQYGSESDEDAALAAAAR--------YEGESE 370
Query: 443 AKTQGVIFFFFGVTAASLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVI 502
A++ I F + Q LY+T++ +C G+ +S F +LPS+ YPDYY+ I
Sbjct: 371 AES---ITSFMDTSNPLYQ----LYDTVR-SCRNNQGQLISEPFFQLPSKKKYPDYYQQI 422
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++ I +KL+ ++YE LD++ AD MF+NA +YN P+S IYK L +Q+++ K
Sbjct: 423 KTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKK 482
Query: 563 MHLREDEDSVPDVPAAVQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCL 622
L +D + D + + + +S +K N+ K+R+ L +
Sbjct: 483 KELARRDD-IEDGDSMISSATSDTGSSKRKSKK---------NMR----KQRMKILYNAV 528
Query: 623 MDYRDQD-GRQPMLMFMELPSAKIYPEYYKV 652
++ R+ GR+ +FM PS K YP+YYK+
Sbjct: 529 LEARESGTGRRLCDLFMVKPSKKDYPDYYKI 559
Score = 364 (133.2 bits), Expect = 1.0e-60, Sum P(3) = 1.0e-60
Identities = 71/135 (52%), Positives = 96/135 (71%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
QK+ +Y +K + K GR+LS IF RLPSR + PDYY I+KPVDME I S + N+Y
Sbjct: 658 QKLNEVYEAVKNYTD-KRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKY 716
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS-VPDVPAAV 579
+ +D MV DF+ MF+NAC YNEP+S IYKDAL L +++L+T+ + DEDS VP+V +
Sbjct: 717 QDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLLI 776
Query: 580 QELLTSLFTSVYNHQ 594
QEL+ +LF SV +HQ
Sbjct: 777 QELIHNLFVSVMSHQ 791
Score = 284 (105.0 bits), Expect = 1.0e-60, Sum P(3) = 1.0e-60
Identities = 66/208 (31%), Positives = 117/208 (56%)
Query: 175 VTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHST 234
+ PI +I+ KLK EY+ L +AD+ L+ +NAK + NS ++ ++ ++ +
Sbjct: 422 IKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAK 481
Query: 235 RNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE--QNQCEDLFNAVMTSTDAD 292
+ +L E D M++S T D+ S ++ + + + L+NAV+ + ++
Sbjct: 482 KKELARRDDIEDG------DSMISSATSDTGSSKRKSKKNMRKQRMKILYNAVLEARESG 535
Query: 293 S-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNA 351
+ R L ++F + PSKK YP+YY +I P+DL+ I I++ KY M D+ LM +NA
Sbjct: 536 TGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNA 595
Query: 352 CTFNEPGSQIYKDAKALKKLVQTKKMEI 379
+NE GSQ+Y DA L+K+++ K+ E+
Sbjct: 596 RHYNEEGSQVYNDAHMLEKILKEKRKEL 623
Score = 269 (99.8 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 62/208 (29%), Positives = 104/208 (50%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+ ++ D+Y D++L+ +NA+ + + SQ + DA L ++
Sbjct: 559 IILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKE 618
Query: 234 TRNKLLN-PQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDAD 292
R +L P+ + S K ++ ++ S S Q + +++ AV TD
Sbjct: 619 KRKELGPLPEDDDVASPK----LKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKR 674
Query: 293 SRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNAC 352
R L +F LPS+ P+YY I P+D+ I + KY + M +D ++M NAC
Sbjct: 675 GRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNAC 734
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIE 380
T+NEP S IYKDA L K++ + EIE
Sbjct: 735 TYNEPESLIYKDALVLHKVLLETRREIE 762
Score = 264 (98.0 bits), Expect = 8.4e-38, Sum P(2) = 8.4e-38
Identities = 64/191 (33%), Positives = 106/191 (55%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
Q+M+ILYN + E E TGR+L +F PS+ DYPDYY++I +P+D++MI +R ++Y
Sbjct: 519 QRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKY 578
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLRE-DEDSVPDVPAAV 579
+ M+ D MF NA YNE S +Y DA L++I+ + + L ED DV A
Sbjct: 579 VGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDD--DV--AS 634
Query: 580 QELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFME 639
+L S + + + + + P++++L + + + +Y D+ GR+ +F+
Sbjct: 635 PKLKLSRKSGISPKKSKYM----------TPMQQKLNEVYEAVKNYTDKRGRRLSAIFLR 684
Query: 640 LPSAKIYPEYY 650
LPS P+YY
Sbjct: 685 LPSRSELPDYY 695
Score = 232 (86.7 bits), Expect = 3.7e-49, Sum P(2) = 3.7e-49
Identities = 60/173 (34%), Positives = 84/173 (48%)
Query: 60 MG-KRRRAXXXXXXXXXXXXXXXXXXXXXXMQTRPKRK-----KIDPSDAMQQIYDVIRN 113
MG KRRRA +R +R+ +DP ++Y+ IR+
Sbjct: 1 MGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRD 60
Query: 114 FKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
+K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK +EYDD++ AD +LL
Sbjct: 61 YKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLL 120
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQE 226
N K K + EY EL ++ F ++ E D E
Sbjct: 121 F-NNA----KAYYKPDSPEYKAACKLW---ELYLRTKNEFVQKGDAEEEDEDE 165
Score = 207 (77.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 42/106 (39%), Positives = 65/106 (61%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNTI++ + + GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++
Sbjct: 54 LYNTIRDY-KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNV 112
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
+ ADF +F+NA Y +PDS YK A L + L+TK + D+
Sbjct: 113 LTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDA 158
Score = 171 (65.3 bits), Expect = 9.5e-43, Sum P(2) = 9.5e-43
Identities = 50/184 (27%), Positives = 91/184 (49%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+D S+ + Q+YD +R+ + G L+ +PF ++P K++ P Y++ + PI +I+ KLK
Sbjct: 378 MDTSNPLYQLYDTVRSCRNNQGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKN 437
Query: 158 DEYDDLSDFQADIELLV-------VTNPIDF---IKIQQKL--KTDEY---DDLSDFQAD 202
EY+ L +AD+ L+ V N + +K+QQ + K E DD+ D +
Sbjct: 438 HEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSM 497
Query: 203 IELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETE 262
I + + KR S+++ Q + L+ N +L + GT ++ FM+ +
Sbjct: 498 ISSATSDTGSS-KRKSKKNMRKQRMKILY----NAVLEARE-SGTGRRLCDLFMVKPSKK 551
Query: 263 DSRD 266
D D
Sbjct: 552 DYPD 555
Score = 157 (60.3 bits), Expect = 2.8e-41, Sum P(2) = 2.8e-41
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 265 RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRT 324
R S++ T D C +L+N + D R L E+F P ++ P+YY+V+ PIDL
Sbjct: 38 RLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMK 97
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL-VQTKKMEIEQG 382
I ++++ +Y + + D L+ NA + +P S YK A L +L ++TK +++G
Sbjct: 98 IQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKG 156
Score = 117 (46.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 20/83 (24%), Positives = 44/83 (53%)
Query: 93 PKRKK-IDP-SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIK 150
PK+ K + P + ++Y+ ++N+ + G L F+R+P + + P Y+ + P+D K
Sbjct: 647 PKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEK 706
Query: 151 IQQKLKTDEYDDLSDFQADIELL 173
I+ + ++Y D+ D ++
Sbjct: 707 IRSHMMANKYQDIDSMVEDFVMM 729
Score = 103 (41.3 bits), Expect = 1.0e-60, Sum P(3) = 1.0e-60
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
+ ++Q+ + + G L+ + F ++P K Q P Y+ ++ PID I Q+++ Y
Sbjct: 181 EILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYK 240
Query: 162 DLSDFQADIELL 173
+ DI+LL
Sbjct: 241 SIHAMAKDIDLL 252
Score = 99 (39.9 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 91 TRPKRKKIDPSDAMQQIYDVIRNFKKED-GALLCDPFIRIPKKRQEPSYHEVVTNPIDFI 149
++ K KK M+ +Y+ + ++ G LCD F+ P K+ P Y++++ P+D
Sbjct: 508 SKRKSKKNMRKQRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLK 567
Query: 150 KIQQKLKTDEY 160
I+ ++ D+Y
Sbjct: 568 MIEHNIRNDKY 578
Score = 91 (37.1 bits), Expect = 3.5e-31, Sum P(3) = 3.5e-31
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 503 RKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ P+ ++I + N+Y LD + ++ + A + N DS IY+DA+ LQ+ ++ +
Sbjct: 815 KPPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIR 874
Query: 563 MHL 565
L
Sbjct: 875 DEL 877
Score = 84 (34.6 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 173 LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFH 232
+ + P+D KI+ + ++Y D+ D ++ NA T+ + S ++DA L ++
Sbjct: 696 ITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLL 755
Query: 233 STRNKLLNPQ-SH 244
TR ++ + SH
Sbjct: 756 ETRREIEGDEDSH 768
Score = 79 (32.9 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 38/190 (20%), Positives = 80/190 (42%)
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGT 247
L+ +L D+ I+ V K + +++D ++E F N E
Sbjct: 683 LRLPSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL 742
Query: 248 SQKRSM---DFMMAS--ETEDSRDSSI--CTEDEQNQCEDLFNAVMTSTDADSRPLHEVF 300
K ++ ++ + E E DS + T Q +LF +VM+ D + R +
Sbjct: 743 IYKDALVLHKVLLETRREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL 802
Query: 301 QLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
+P+ P + + + D+ I + +++ +Y L ++++ + + A N S+
Sbjct: 803 AEIPAVD--PNFPNKPPLTFDI--IRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSE 858
Query: 361 IYKDAKALKK 370
IY+DA L++
Sbjct: 859 IYEDAVELQQ 868
Score = 40 (19.1 bits), Expect = 6.6e-26, Sum P(3) = 6.6e-26
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 533 MFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVP 573
+F N K E + H D L ++ ++ +HL +D++ VP
Sbjct: 1098 VFANTDKAEE-EKH--SDTLDDSKVG-ESILHLEKDKEDVP 1134
Score = 39 (18.8 bits), Expect = 8.4e-26, Sum P(3) = 8.4e-26
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 602 HVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPS 642
HV NV ++ ++ L +M ++D +GR E+P+
Sbjct: 768 HVPNV-TLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPA 807
Score = 38 (18.4 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEIEQGK 383
T +EP YK L L +T M GK
Sbjct: 1201 TEHEPTKMFYKKEVFLSNLEETCPMSCILGK 1231
>WB|WBGene00007042 [details] [associations]
symbol:pbrm-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS00028 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00355 SMART:SM00439 Pfam:PF00505 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003677
GO:GO:0008270 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0040035 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:Z72517
HSSP:Q03330 EMBL:Z72503 KO:K11757 GeneTree:ENSGT00390000003017
PIR:T19481 RefSeq:NP_001021008.1 ProteinModelPortal:G5EEY5
SMR:G5EEY5 PRIDE:G5EEY5 EnsemblMetazoa:C26C6.1a GeneID:172504
KEGG:cel:CELE_C26C6.1 CTD:172504 WormBase:C26C6.1a OMA:IQNPIDM
NextBio:875801 Uniprot:G5EEY5
Length = 1883
Score = 334 (122.6 bits), Expect = 2.1e-51, Sum P(2) = 2.1e-51
Identities = 91/279 (32%), Positives = 140/279 (50%)
Query: 175 VTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHST 234
V PID IQ KLK EY F D + +KN T+YK S+EH+D ++ ELF +
Sbjct: 85 VKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIKNNLTYYKDESEEHKDMMKIQELFEAA 144
Query: 235 RNKLLNPQ---SHEGTSQKRSMDFMMASETE------DSRDSSICTEDEQNQCEDLFNAV 285
K+ + + E ++ + E E SRDS+ D C DL AV
Sbjct: 145 TAKVKSGEYLDDAEDEEGDEDVEETVQEEEEPEESGTSSRDSTPMDLDHFMLC-DLLGAV 203
Query: 286 MTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
+ +TD R L F++L S++ +P YY+ I PIDL+TIA+ + KY+++ +++ DL
Sbjct: 204 LEATDNTGRLLCPPFRVLQSREDFPLYYEKIAKPIDLKTIAQNGVNKKYSTMKELKDDLF 263
Query: 346 LMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLS 405
L+ KNA F+ GS I+KDA+ LK +V+ K +E+ P R ++ R+ +
Sbjct: 264 LLFKNAQQFSGNGSDIFKDAEQLKTVVKEKIARLEEKGVHPM---RRAKATRL-----VD 315
Query: 406 AITAALXXXXXXXXXXXXXXXXXPNS-PLWQVYDAIRNA 443
A+ A+ NS P+W++Y IRNA
Sbjct: 316 ALLTAVAVNENFSEDSEEDEETETNSEPMWKLYWTIRNA 354
Score = 288 (106.4 bits), Expect = 2.1e-51, Sum P(2) = 2.1e-51
Identities = 58/136 (42%), Positives = 90/136 (66%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
QKM L+ ++K+ E T R L+ F RLPS+ ++P YY+VI+KP+DM I KL QY
Sbjct: 712 QKMWRLFKSMKDVREEGTNRPLAVNFMRLPSKEEFPAYYDVIKKPMDMMRIKHKLENRQY 771
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQ 580
L ++V+DF+ M NACK+NE DS IYK+A+SLQ+ +L+ K L +D+ P V ++
Sbjct: 772 VTLLDVVSDFMLMLSNACKFNETDSDIYKEAVSLQKALLEMKRELDTGDDA-PRVQVELR 830
Query: 581 ELLTSLFTSVYNHQKQ 596
+ TS+F S+++ + +
Sbjct: 831 TIFTSIFASLFSKKDE 846
Score = 282 (104.3 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 74/290 (25%), Positives = 138/290 (47%)
Query: 104 MQQIYDVIRNFK--KEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
MQ +++VI +++ G FI++P +Q P Y++++ NPID I+ ++ +Y
Sbjct: 536 MQGLWNVIHSYRVASNPGHWPAGAFIQLPSAKQYPEYYQIIQNPIDMKTIRMRIDGHQYP 595
Query: 162 DLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEH 221
+ D ++ +N DF + + + D E + +N S H
Sbjct: 596 QVDAMINDCRVMF-SNARDFNEPRSMIHMDAIQLEKAVLRAYEGM-RNTSLGSSIPSTPH 653
Query: 222 RDAQELMELFH--STRNKLLN--PQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQ 277
+ LM+ + ++++ ++ G+ + S + D+ + E+ +
Sbjct: 654 SSSSNLMKAMKLKTPKSEVRGRGKKNFSGSDDEESARINIQQHQRSMEDAIMQLPIEEQK 713
Query: 278 CEDLFNAVM-TSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
LF ++ + +RPL F LPSK+ +P YYDVI P+D+ I ++++ +Y +
Sbjct: 714 MWRLFKSMKDVREEGTNRPLAVNFMRLPSKEEFPAYYDVIKKPMDMMRIKHKLENRQYVT 773
Query: 337 LGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTP 386
L D+ D +LM NAC FNE S IYK+A +L+K + K E++ G P
Sbjct: 774 LLDVVSDFMLMLSNACKFNETDSDIYKEAVSLQKALLEMKRELDTGDDAP 823
Score = 207 (77.9 bits), Expect = 2.1e-29, Sum P(3) = 2.1e-29
Identities = 65/226 (28%), Positives = 107/226 (47%)
Query: 175 VTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHST 234
+ PID I Q +Y + + + D+ LL KNA+ F S +DA++L +
Sbjct: 234 IAKPIDLKTIAQNGVNKKYSTMKELKDDLFLLFKNAQQFSGNGSDIFKDAEQLKTVVKEK 293
Query: 235 RNKLLNPQSHEGTSQK--RSMDFMMASETEDSRDSSICTEDEQNQC--EDLFNAVMTSTD 290
+L H K R +D ++ + + S EDE+ + E ++ T +
Sbjct: 294 IARLEEKGVHPMRRAKATRLVDALLTAVAVNENFSEDSEEDEETETNSEPMWKLYWTIRN 353
Query: 291 A----DSR-PLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
A D L + F LPSK+ YP+YYD I P+ + I +R+++GKY L + DL+
Sbjct: 354 AVHEKDRNVTLADNFLELPSKESYPDYYDEIKNPVSIFMINKRLKNGKY-DLKSLVADLM 412
Query: 346 LMTKNACTFNEPGSQIYKDAKALKKL-VQTKKMEI---EQGKFTPA 387
M NA +N S++Y A+ LK L + T K + + ++ PA
Sbjct: 413 QMYSNAFDYNLESSEVYISAEKLKALTISTCKQLVPSFDVSQYEPA 458
Score = 186 (70.5 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 55/188 (29%), Positives = 95/188 (50%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
L + E + TGR L F+ L SR D+P YYE I KP+D++ IA +Y + E
Sbjct: 199 LLGAVLEATD-NTGRLLCPPFRVLQSREDFPLYYEKIAKPIDLKTIAQNGVNKKYSTMKE 257
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQELLTS 585
+ D +F NA +++ S I+KDA L+ +V + K+ E++ P A L+ +
Sbjct: 258 LKDDLFLLFKNAQQFSGNGSDIFKDAEQLKTVVKE-KIARLEEKGVHPMRRAKATRLVDA 316
Query: 586 LFTSVYNHQKQCLGSFH--VLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPML-MFMELPS 642
L T+V ++ S +++P+ + +T+ + ++D + F+ELPS
Sbjct: 317 LLTAVAVNENFSEDSEEDEETETNSEPMWKLYWTIRNAV---HEKDRNVTLADNFLELPS 373
Query: 643 AKIYPEYY 650
+ YP+YY
Sbjct: 374 KESYPDYY 381
Score = 185 (70.2 bits), Expect = 8.7e-44, Sum P(3) = 8.7e-44
Identities = 41/117 (35%), Positives = 64/117 (54%)
Query: 463 MRILYNTIKE-TCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYE 521
M+ L+N I G + F +LPS YP+YY++I+ P+DM+ I ++ +QY
Sbjct: 536 MQGLWNVIHSYRVASNPGHWPAGAFIQLPSAKQYPEYYQIIQNPIDMKTIRMRIDGHQYP 595
Query: 522 HLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDE--DSVPDVP 576
+D M+ D MF NA +NEP S I+ DA+ L++ VL+ +R S+P P
Sbjct: 596 QVDAMINDCRVMFSNARDFNEPRSMIHMDAIQLEKAVLRAYEGMRNTSLGSSIPSTP 652
Score = 174 (66.3 bits), Expect = 1.2e-42, Sum P(3) = 1.2e-42
Identities = 44/126 (34%), Positives = 63/126 (50%)
Query: 456 TAASLQKMRILYNTIKETCEPKTGR-QLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASK 514
T + + M LY TI+ K L+ F LPS+ YPDYY+ I+ PV + MI +
Sbjct: 337 TETNSEPMWKLYWTIRNAVHEKDRNVTLADNFLELPSKESYPDYYDEIKNPVSIFMINKR 396
Query: 515 LRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPD 574
L+ +Y+ L +VAD +QM+ NA YN S +Y A L+ + + T L D
Sbjct: 397 LKNGKYD-LKSLVADLMQMYSNAFDYNLESSEVYISAEKLKALTISTCKQLVPSFDVSQY 455
Query: 575 VPAAVQ 580
PA Q
Sbjct: 456 EPAPAQ 461
Score = 142 (55.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 48/177 (27%), Positives = 81/177 (45%)
Query: 486 FQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDS 545
F RLP R P+YYE +++P+D+ I KL+ +Y D+ DF+ N Y + +S
Sbjct: 69 FLRLPPRRFEPEYYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIKNNLTYYKDES 128
Query: 546 HIYKDALSLQRIV------LQTKMHL--REDEDSVPDVPAAVQELLTSLFTSVYNHQKQC 597
+KD + +Q + +++ +L EDE+ DV VQE + +
Sbjct: 129 EEHKDMMKIQELFEAATAKVKSGEYLDDAEDEEGDEDVEETVQE----------EEEPEE 178
Query: 598 LGSFHVLNVDNKPLKRRLYTLCKCL---MDYRDQDGRQPMLMFMELPSAKIYPEYYK 651
G+ + D+ P+ + LC L ++ D GR F L S + +P YY+
Sbjct: 179 SGTS---SRDSTPMDLDHFMLCDLLGAVLEATDNTGRLLCPPFRVLQSREDFPLYYE 232
Score = 130 (50.8 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 25/103 (24%), Positives = 54/103 (52%)
Query: 289 TDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMT 348
+ A + + E F LP ++ PEYY+ + PID+ TI +++ +Y + D ++
Sbjct: 58 SSAGNNSVFESFLRLPPRRFEPEYYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFI 117
Query: 349 KNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSE 391
KN T+ + S+ +KD +++L + +++ G++ + E
Sbjct: 118 KNNLTYYKDESEEHKDMMKIQELFEAATAKVKSGEYLDDAEDE 160
Score = 127 (49.8 bits), Expect = 5.2e-21, Sum P(3) = 5.2e-21
Identities = 47/192 (24%), Positives = 74/192 (38%)
Query: 62 KRRRAXXXXXXXXXXXXXXXXXXXXXXMQTRPKRKKIDPSDAMQQIYDVIRNFKKEDGA- 120
KR+RA M K K+ + IR + G
Sbjct: 4 KRKRAAEPDPEKDVASTSTASKKRKGRMTIAEKEKREFEMAKGNYVMAQIRKHRSSAGNN 63
Query: 121 LLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPID 180
+ + F+R+P +R EP Y+E V PID IQ KLK EY F D ++ + N +
Sbjct: 64 SVFESFLRLPPRRFEPEYYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDF-MMFIKNNLT 122
Query: 181 FIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLN 240
+ K + ++E+ D+ Q E K+ + E + E +E T +
Sbjct: 123 YYKDE----SEEHKDMMKIQELFEAATAKVKSGEYLDDAEDEEGDEDVE---ETVQEEEE 175
Query: 241 PQSHEGTSQKRS 252
P+ GTS + S
Sbjct: 176 PEE-SGTSSRDS 186
Score = 123 (48.4 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 101 SDAMQQIYDVIRN--FKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTD 158
S+ M ++Y IRN +K+ L D F+ +P K P Y++ + NP+ I ++LK
Sbjct: 341 SEPMWKLYWTIRNAVHEKDRNVTLADNFLELPSKESYPDYYDEIKNPVSIFMINKRLKNG 400
Query: 159 EYDDLSDFQADIELLVVTNPIDF 181
+YD L AD+ + + +N D+
Sbjct: 401 KYD-LKSLVADL-MQMYSNAFDY 421
Score = 92 (37.4 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 119 GALLCDPFIRIPKKRQE-PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVT- 176
G LLC PF R+ + R++ P Y+E + PID I Q +Y + + + D+ LL
Sbjct: 211 GRLLCPPF-RVLQSREDFPLYYEKIAKPIDLKTIAQNGVNKKYSTMKELKDDLFLLFKNA 269
Query: 177 -----NPIDFIKIQQKLKT 190
N D K ++LKT
Sbjct: 270 QQFSGNGSDIFKDAEQLKT 288
Score = 77 (32.2 bits), Expect = 8.7e-44, Sum P(3) = 8.7e-44
Identities = 17/65 (26%), Positives = 36/65 (55%)
Query: 589 SVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLM-FMELPSAKIYP 647
++ HQ+ + L ++ +++++ L K + D R++ +P+ + FM LPS + +P
Sbjct: 692 NIQQHQRSMEDAIMQLPIE----EQKMWRLFKSMKDVREEGTNRPLAVNFMRLPSKEEFP 747
Query: 648 EYYKV 652
YY V
Sbjct: 748 AYYDV 752
Score = 75 (31.5 bits), Expect = 2.0e-42, Sum P(3) = 2.0e-42
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 612 KRRLYTLCKCLMDYR--DQDGRQPMLMFMELPSAKIYPEYYKV 652
K + L + YR G P F++LPSAK YPEYY++
Sbjct: 533 KAMMQGLWNVIHSYRVASNPGHWPAGAFIQLPSAKQYPEYYQI 575
Score = 72 (30.4 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 505 PVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
P ++ I + +Y LD++ DF +F+ A + ++ S +Y+ A +LQ+
Sbjct: 873 PFTLDQIKMNIDKCRYRRLDKLQKDFFDLFERARELSKAGSSMYEAACTLQK 924
Score = 59 (25.8 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 319 PIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKK 370
P L I I +Y L ++KD + + A ++ GS +Y+ A L+K
Sbjct: 873 PFTLDQIKMNIDKCRYRRLDKLQKDFFDLFERARELSKAGSSMYEAACTLQK 924
Score = 39 (18.8 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 559 LQTKMHLREDEDSVPDVPAAVQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRL--- 615
+ + H R ED++ +P Q++ LF S+ + +++ +N P K
Sbjct: 691 INIQQHQRSMEDAIMQLPIEEQKMWR-LFKSMKDVREEGTNRPLAVNFMRLPSKEEFPAY 749
Query: 616 YTLCKCLMD 624
Y + K MD
Sbjct: 750 YDVIKKPMD 758
Score = 38 (18.4 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 503 RKPVDMEMIASKLRYNQ----YEHLDEMVAD 529
++P+ M+ S L + +HLDEM+ D
Sbjct: 1366 KQPIKMDKELSPLLKGEGVMPLDHLDEMMDD 1396
>UNIPROTKB|C9JPI5 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0000776 "kinetochore" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0007507 GO:GO:0000776
GO:GO:0003682 GO:GO:0001890 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 EMBL:AC104446 HGNC:HGNC:30064
ChiTaRS:PBRM1 EMBL:AC112215 IPI:IPI00917348
ProteinModelPortal:C9JPI5 SMR:C9JPI5 STRING:C9JPI5
Ensembl:ENST00000431678 ArrayExpress:C9JPI5 Bgee:C9JPI5
Uniprot:C9JPI5
Length = 230
Score = 259 (96.2 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 57/149 (38%), Positives = 87/149 (58%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV+ PID +KIQQKLK +EYDD++ AD +LL NAK++YK +S E++ A +L +L+
Sbjct: 87 VVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLR 146
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADS 293
TRN+ + + + TE S + + + E L A++ +T+
Sbjct: 147 TRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPAYL-----KEILEQLLEAIVVATNPSG 201
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDL 322
R + E+FQ LPSK +YP+YY +I PIDL
Sbjct: 202 RLISELFQKLPSKVQYPDYYAIIKEPIDL 230
Score = 224 (83.9 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+DP ++Y+ IR++K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK
Sbjct: 44 VDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKM 103
Query: 158 DEYDDLSDFQADIELL 173
+EYDD++ AD +LL
Sbjct: 104 EEYDDVNLLTADFQLL 119
Score = 210 (79.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 60/188 (31%), Positives = 94/188 (50%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNTI++ + + GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++
Sbjct: 53 LYNTIRDY-KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNL 111
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMH-LREDEDSVPDVPAAVQELLT 584
+ ADF +F+NA Y +PDS YK A L + L+T+ +++ E D Q+
Sbjct: 112 LTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQD--- 168
Query: 585 SLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAK 644
N GS LK L L + ++ + GR +F +LPS
Sbjct: 169 -------NQGTVTEGSSPAY------LKEILEQLLEAIVVATNPSGRLISELFQKLPSKV 215
Query: 645 IYPEYYKV 652
YP+YY +
Sbjct: 216 QYPDYYAI 223
Score = 153 (58.9 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 36/120 (30%), Positives = 65/120 (54%)
Query: 265 RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRT 324
R S++ T D C +L+N + D R L E+F P ++ P+YY+V+ PIDL
Sbjct: 37 RLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMK 96
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL-VQTKKMEIEQGK 383
I ++++ +Y + + D L+ NA ++ +P S YK A L L ++T+ +++G+
Sbjct: 97 IQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGE 156
Score = 108 (43.1 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 454 GVTAASLQK-MRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDM 508
G + A L++ + L I P +GR +S +FQ+LPS+ YPDYY +I++P+D+
Sbjct: 176 GSSPAYLKEILEQLLEAIVVATNP-SGRLISELFQKLPSKVQYPDYYAIIKEPIDL 230
>POMBASE|SPBC1734.15 [details] [associations]
symbol:rsc4 "RSC complex subunit Rsc4" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEP]
[GO:0000790 "nuclear chromatin" evidence=IC] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IC] [GO:0016586 "RSC complex"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEP] InterPro:IPR001487
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
PomBase:SPBC1734.15 GO:GO:0005829 EMBL:CU329671 GO:GO:0045944
GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000122
GO:GO:0000790 GO:GO:0016586 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 KO:K11759 GO:GO:1900388 EMBL:X86764
PIR:S58680 RefSeq:NP_595432.1 ProteinModelPortal:Q09948
DIP:DIP-48391N STRING:Q09948 EnsemblFungi:SPBC1734.15.1
GeneID:2539999 KEGG:spo:SPBC1734.15 OrthoDB:EOG4GBBGR
NextBio:20801142 Uniprot:Q09948
Length = 542
Score = 262 (97.3 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 73/239 (30%), Positives = 121/239 (50%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ PI + ++ K KT +Y + DF DI L+V NA+T+ S + E L +
Sbjct: 52 IIQKPICYKMMRNKAKTGKYLSMGDFYDDIRLMVSNAQTYNMPGSLVY----ECSVLIAN 107
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTE-DEQNQCEDLFNAVMTSTDAD 292
T N L +S +GT + + M +S E+ + + E D +++ +A+ D
Sbjct: 108 TANSL---ESKDGTLNEEENEEMESSINEEHKPGT--NEIDVPKVIQNILDALHEEKDEQ 162
Query: 293 SRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNAC 352
R L ++F LPSK+ YP+YY++I P+ ++ + +R + G+Y +L KDL M NA
Sbjct: 163 GRFLIDIFIDLPSKRLYPDYYEIIKSPMTIKMLEKRFKKGEYTTLESFVKDLNQMFINAK 222
Query: 353 TFNEPGSQIYKDAKALKKLVQTKKMEI-EQGK-FTPAGKSERIRSKRIRGGQSLSAITA 409
T+N PGS +Y+DA+ L +L + EQ K +PA S+SA T+
Sbjct: 223 TYNAPGSFVYEDAEKLSQLSSSLISSFSEQPKEHSPATSKHEPEETPASPTPSVSASTS 281
Score = 181 (68.8 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 31/90 (34%), Positives = 56/90 (62%)
Query: 274 EQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGK 333
++ + +++ A++ D + P ++F+ LPSK+ +P+YY +I PI + + + + GK
Sbjct: 11 DKTKFDEVLEALVGLKDNEGNPFDDIFEELPSKRYFPDYYQIIQKPICYKMMRNKAKTGK 70
Query: 334 YASLGDMEKDLILMTKNACTFNEPGSQIYK 363
Y S+GD D+ LM NA T+N PGS +Y+
Sbjct: 71 YLSMGDFYDDIRLMVSNAQTYNMPGSLVYE 100
Score = 179 (68.1 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 464 RILYNTIKETCEPKT--GRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYE 521
+++ N + E K GR L IF LPS+ YPDYYE+I+ P+ ++M+ + + +Y
Sbjct: 146 KVIQNILDALHEEKDEQGRFLIDIFIDLPSKRLYPDYYEIIKSPMTIKMLEKRFKKGEYT 205
Query: 522 HLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRI 557
L+ V D QMF NA YN P S +Y+DA L ++
Sbjct: 206 TLESFVKDLNQMFINAKTYNAPGSFVYEDAEKLSQL 241
Score = 139 (54.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 47/207 (22%), Positives = 82/207 (39%)
Query: 92 RPKRKKIDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKI 151
+P +ID +Q I D + K E G L D FI +P KR P Y+E++ +P+ +
Sbjct: 136 KPGTNEIDVPKVIQNILDALHEEKDEQGRFLIDIFIDLPSKRLYPDYYEIIKSPMTIKML 195
Query: 152 QQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAK 211
+++ K EY L F D+ + + K + Y+D L+ +
Sbjct: 196 EKRFKKGEYTTLESFVKDLNQMFIN-----AKTYNAPGSFVYEDAEKLSQLSSSLISS-- 248
Query: 212 TFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICT 271
+ +EH A E + + P TS++RS + T D +
Sbjct: 249 --FSEQPKEHSPATSKHEPEETPASP--TPSVSASTSRERSTSVAPSFITSDQAATPDVL 304
Query: 272 EDEQNQCEDLFNAVMTSTDADSRPLHE 298
+ E+ E F+ ++ D P+ E
Sbjct: 305 KSEEAHVES-FSK---ESEKDQTPIPE 327
Score = 138 (53.6 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 29/105 (27%), Positives = 58/105 (55%)
Query: 479 GRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNAC 538
G IF+ LPS+ +PDYY++I+KP+ +M+ +K + +Y + + D M NA
Sbjct: 30 GNPFDDIFEELPSKRYFPDYYQIIQKPICYKMMRNKAKTGKYLSMGDFYDDIRLMVSNAQ 89
Query: 539 KYNEPDSHIYKDALSLQRIV--LQTKMHLREDEDSVPDVPAAVQE 581
YN P S +Y+ ++ + L++K +E++ ++ +++ E
Sbjct: 90 TYNMPGSLVYECSVLIANTANSLESKDGTLNEEEN-EEMESSINE 133
Score = 110 (43.8 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 106 QIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSD 165
++ + + K +G D F +P KR P Y++++ PI + ++ K KT +Y + D
Sbjct: 17 EVLEALVGLKDNEGNPFDDIFEELPSKRYFPDYYQIIQKPICYKMMRNKAKTGKYLSMGD 76
Query: 166 FQADIELLV 174
F DI L+V
Sbjct: 77 FYDDIRLMV 85
Score = 78 (32.5 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 15/55 (27%), Positives = 34/55 (61%)
Query: 604 LNVDNKP------LKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKV 652
+N ++KP + + + + L + +D+ GR + +F++LPS ++YP+YY++
Sbjct: 131 INEEHKPGTNEIDVPKVIQNILDALHEEKDEQGRFLIDIFIDLPSKRLYPDYYEI 185
>ASPGD|ASPL0000036706 [details] [associations]
symbol:AN3448 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016586 "RSC complex"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:1900388 "regulation of
vesicle-mediated transport by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0042173 "regulation of sporulation resulting in formation of a
cellular spore" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439
Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038
SMART:SM00297 SMART:SM00439 GO:GO:0003677 EMBL:BN001306
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 EMBL:AACD01000058 KO:K11756 OrthoDB:EOG4D5673
RefSeq:XP_661052.1 ProteinModelPortal:Q5B7N2 STRING:Q5B7N2
EnsemblFungi:CADANIAT00009586 GeneID:2874256 KEGG:ani:AN3448.2
HOGENOM:HOG000193462 OMA:TWASCLP Uniprot:Q5B7N2
Length = 884
Score = 181 (68.8 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 46/160 (28%), Positives = 88/160 (55%)
Query: 462 KMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYE 521
+++ + I++ P ++ H F+RLP + YPDYY I++P+ +++I K + +Y
Sbjct: 238 RIKAVLKGIRKLKGPGNQLKVRH-FERLPDKGVYPDYYVEIKEPIAIDLIKRKSKRKKYN 296
Query: 522 HLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQE 581
+D + D MF+NA YN+P+S IYKDA+ LQ ++ + L + E PD +++
Sbjct: 297 SVDHFMKDMDLMFNNAKAYNQPESQIYKDAVDLQ---MEAR-RLADLEKKKPDSDYLMED 352
Query: 582 LLTSLFTSVYNHQKQC--LGSF-HVLNVDN--KPLKRRLY 616
L + H+ + +G + H+ N ++ KP+ ++Y
Sbjct: 353 GRLPLPDGIL-HKGELWKVGDWVHIQNPNDVTKPIVAQIY 391
Score = 165 (63.1 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 35/125 (28%), Positives = 64/125 (51%)
Query: 267 SSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIA 326
+S TE++ D+ A+ +AD +F +K+ P+YYD+I P+ L +
Sbjct: 31 TSTVTEEQWKHMMDVVLAIYEVREADGHDPSRLFHRSVNKRNVPDYYDIIKEPMALSILK 90
Query: 327 RRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTP 386
++I +Y S+ + +D L+ NA T+N P SQ Y+D+ +K T+ ++ Q
Sbjct: 91 QKINKREYKSVSEFVRDCALIPHNAQTYNRPNSQAYEDSLVIKDAFVTELQKLVQAGIIT 150
Query: 387 AGKSE 391
A ++E
Sbjct: 151 AEEAE 155
Score = 145 (56.1 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 300 FQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGS 359
F+ LP K YP+YY I PI + I R+ + KY S+ KD+ LM NA +N+P S
Sbjct: 261 FERLPDKGVYPDYYVEIKEPIAIDLIKRKSKRKKYNSVDHFMKDMDLMFNNAKAYNQPES 320
Query: 360 QIYKDAKALKKLVQTKKM-EIEQGK 383
QIYKDA L+ ++ +++ ++E+ K
Sbjct: 321 QIYKDAVDLQ--MEARRLADLEKKK 343
Score = 143 (55.4 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 36/127 (28%), Positives = 63/127 (49%)
Query: 429 PNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQKMRILYNTIKETCEPKTGRQLSHIFQR 488
P P+ + D + K GV VT + M + I E E G S +F R
Sbjct: 14 PEEPVQSIED---DGKQNGVTST---VTEEQWKHMMDVVLAIYEVREAD-GHDPSRLFHR 66
Query: 489 LPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIY 548
++ + PDYY++I++P+ + ++ K+ +Y+ + E V D + NA YN P+S Y
Sbjct: 67 SVNKRNVPDYYDIIKEPMALSILKQKINKREYKSVSEFVRDCALIPHNAQTYNRPNSQAY 126
Query: 549 KDALSLQ 555
+D+L ++
Sbjct: 127 EDSLVIK 133
Score = 99 (39.9 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+ ++QK+ EY +S+F D L+ NA+T+ + NSQ + D+ + + F +
Sbjct: 79 IIKEPMALSILKQKINKREYKSVSEFVRDCALIPHNAQTYNRPNSQAYEDSLVIKDAFVT 138
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCED 280
KL+ Q+ T+++ + + D EDE ++ +D
Sbjct: 139 ELQKLV--QAGIITAEEAELPDLGEIPEPDPLPEEDDDEDEDDEDDD 183
Score = 85 (35.0 bits), Expect = 6.7e-12, Sum P(3) = 6.7e-12
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
D + IY+V R D + L F R KR P Y++++ P+ ++QK+ EY
Sbjct: 44 DVVLAIYEV-READGHDPSRL---FHRSVNKRNVPDYYDIIKEPMALSILKQKINKREYK 99
Query: 162 DLSDFQADIELL 173
+S+F D L+
Sbjct: 100 SVSEFVRDCALI 111
Score = 61 (26.5 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 14/72 (19%), Positives = 31/72 (43%)
Query: 505 PVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMH 564
P+D E+ + RYN+ +H + + + + + + +Y +++I K
Sbjct: 462 PLDKEIYVCEARYNEEKHKLNKIKTWASCLPDEVREKDYEMDLYDVPRRIKKIPSPIKHL 521
Query: 565 LREDEDSVPDVP 576
L+ D D+P
Sbjct: 522 LKSDAKETDDLP 533
Score = 55 (24.4 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 606 VDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYY 650
VD P++ R+ + K + + + + F LP +YP+YY
Sbjct: 231 VDT-PMEARIKAVLKGIRKLKGPGNQLKVRHFERLPDKGVYPDYY 274
>UNIPROTKB|C9JQF1 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0000776 "kinetochore" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0007507 GO:GO:0000776
GO:GO:0003682 GO:GO:0001890 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 EMBL:AC104446 HGNC:HGNC:30064
ChiTaRS:PBRM1 EMBL:AC112215 HOGENOM:HOG000207828 IPI:IPI00917316
ProteinModelPortal:C9JQF1 SMR:C9JQF1 STRING:C9JQF1
Ensembl:ENST00000420148 ArrayExpress:C9JQF1 Bgee:C9JQF1
Uniprot:C9JQF1
Length = 152
Score = 224 (83.9 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+DP ++Y+ IR++K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK
Sbjct: 44 VDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKM 103
Query: 158 DEYDDLSDFQADIELL 173
+EYDD++ AD +LL
Sbjct: 104 EEYDDVNLLTADFQLL 119
Score = 201 (75.8 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 40/97 (41%), Positives = 62/97 (63%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNTI++ + + GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++
Sbjct: 53 LYNTIRDY-KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNL 111
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTK 562
+ ADF +F+NA Y +PDS YK A L + L+T+
Sbjct: 112 LTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTR 148
Score = 169 (64.5 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 33/66 (50%), Positives = 49/66 (74%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV+ PID +KIQQKLK +EYDD++ AD +LL NAK++YK +S E++ A +L +L+
Sbjct: 87 VVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLR 146
Query: 234 TRNKLL 239
TRN+ +
Sbjct: 147 TRNEFV 152
Score = 145 (56.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 265 RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRT 324
R S++ T D C +L+N + D R L E+F P ++ P+YY+V+ PIDL
Sbjct: 37 RLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMK 96
Query: 325 IARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
I ++++ +Y + + D L+ NA ++ +P S YK A
Sbjct: 97 IQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAA 137
>UNIPROTKB|C9J053 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0000776 "kinetochore" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0007507 GO:GO:0000776
GO:GO:0003682 GO:GO:0001890 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AC104446 OrthoDB:EOG41NTK5 HGNC:HGNC:30064 ChiTaRS:PBRM1
EMBL:AC112215 IPI:IPI00917875 ProteinModelPortal:C9J053 SMR:C9J053
STRING:C9J053 Ensembl:ENST00000449505 HOGENOM:HOG000207828
ArrayExpress:C9J053 Bgee:C9J053 Uniprot:C9J053
Length = 118
Score = 220 (82.5 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 39/75 (52%), Positives = 55/75 (73%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+DP ++Y+ IR++K E G LLC+ FIR PK+R +P Y+EVV+ PID +KIQQKLK
Sbjct: 44 VDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKM 103
Query: 158 DEYDDLSDFQADIEL 172
+EYDD++ AD +L
Sbjct: 104 EEYDDVNLLTADFQL 118
Score = 146 (56.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LYNTI++ + + GR L +F R P R + PDYYEV+ +P+D+ I KL+ +Y+ ++
Sbjct: 53 LYNTIRDY-KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNL 111
Query: 526 MVADF 530
+ ADF
Sbjct: 112 LTADF 116
Score = 115 (45.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 265 RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRT 324
R S++ T D C +L+N + D R L E+F P ++ P+YY+V+ PIDL
Sbjct: 37 RLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMK 96
Query: 325 IARRIQDGKYASLGDMEKDLIL 346
I ++++ +Y + + D L
Sbjct: 97 IQQKLKMEEYDDVNLLTADFQL 118
Score = 98 (39.6 bits), Expect = 0.00042, P = 0.00042
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIEL 205
VV+ PID +KIQQKLK +EYDD++ AD +L
Sbjct: 87 VVSQPIDLMKIQQKLKMEEYDDVNLLTADFQL 118
>UNIPROTKB|B1ALG2 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0008285 GO:GO:0071564
GO:GO:0071565 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 ChiTaRS:SMARCA2 EMBL:AL359076 EMBL:AL138755
UniGene:Hs.298990 HGNC:HGNC:11098 GO:GO:0035887 IPI:IPI00103451
SMR:B1ALG2 Ensembl:ENST00000382186 HOGENOM:HOG000049057
HOVERGEN:HBG062263 Uniprot:B1ALG2
Length = 254
Score = 217 (81.4 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 42/90 (46%), Positives = 63/90 (70%)
Query: 290 DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
++ R L EVF LPS+K PEYY++I P+D + I RI++ KY SLGD+EKD++L+
Sbjct: 81 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 140
Query: 350 NACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 141 NAQTFNLEGSQIYEDSIVLQSVFKSARQKI 170
Score = 194 (73.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 36/94 (38%), Positives = 61/94 (64%)
Query: 478 TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
+GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y L ++ D + + NA
Sbjct: 83 SGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNA 142
Query: 538 CKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
+N S IY+D++ LQ + + + ++E+S
Sbjct: 143 QTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES 176
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 30/107 (28%), Positives = 55/107 (51%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+DF KI+++++ +Y L D + D+ LL NA+TF SQ + D+ L +F S
Sbjct: 106 LIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKS 165
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCED 280
R K+ + E S + + E +S S+ + + N+ +D
Sbjct: 166 ARQKIAKEEESEDESNEEEEE--EDEEESESEAKSVKVKIKLNKKDD 210
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/166 (24%), Positives = 82/166 (49%)
Query: 119 GALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNP 178
G L + FI++P +++ P Y+E++ P+DF KI+++++ +Y L D + D+ +L+ N
Sbjct: 84 GRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDV-MLLCHNA 142
Query: 179 IDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMEL-FHSTRNK 237
F ++ D S F++ + + K ++ + N +E + +E E S + K
Sbjct: 143 QTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVK 202
Query: 238 L-LNPQSHEGTSQ---KRSMDFMMASETEDSRDSSICTEDEQNQCE 279
+ LN + +G + K+ + A DS +DE+ Q E
Sbjct: 203 IKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDFDSDE-EQDEREQSE 247
>UNIPROTKB|F6XDY1 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0008285 GO:GO:0071564
GO:GO:0071565 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 ChiTaRS:SMARCA2 EMBL:AL359076 EMBL:AL138755
HGNC:HGNC:11098 GO:GO:0035887 IPI:IPI00643691
ProteinModelPortal:F6XDY1 SMR:F6XDY1 Ensembl:ENST00000452193
ArrayExpress:F6XDY1 Bgee:F6XDY1 Uniprot:F6XDY1
Length = 171
Score = 217 (81.4 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 42/90 (46%), Positives = 63/90 (70%)
Query: 290 DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
++ R L EVF LPS+K PEYY++I P+D + I RI++ KY SLGD+EKD++L+
Sbjct: 81 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 140
Query: 350 NACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 141 NAQTFNLEGSQIYEDSIVLQSVFKSARQKI 170
Score = 181 (68.8 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 34/80 (42%), Positives = 54/80 (67%)
Query: 478 TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
+GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y L ++ D + + NA
Sbjct: 83 SGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNA 142
Query: 538 CKYNEPDSHIYKDALSLQRI 557
+N S IY+D++ LQ +
Sbjct: 143 QTFNLEGSQIYEDSIVLQSV 162
Score = 123 (48.4 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+DF KI+++++ +Y L D + D+ LL NA+TF SQ + D+ L +F S
Sbjct: 106 LIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKS 165
Query: 234 TRNKL 238
R K+
Sbjct: 166 ARQKI 170
Score = 121 (47.7 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 19/55 (34%), Positives = 37/55 (67%)
Query: 119 GALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
G L + FI++P +++ P Y+E++ P+DF KI+++++ +Y L D + D+ LL
Sbjct: 84 GRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLL 138
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 229 (85.7 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 45/103 (43%), Positives = 68/103 (66%)
Query: 277 QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
Q + + V+ D+ R L EVF LPS+K PEYY++I P+D + I RI++ KY S
Sbjct: 1360 QMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRS 1419
Query: 337 LGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
LGD+EKD++L+ NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 1420 LGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1462
Score = 196 (74.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 38/111 (34%), Positives = 69/111 (62%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
++M + +T+ + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1359 KQMNAIIDTVINY-KDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1417
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L ++ D + + NA +N S IY+D++ LQ + + + ++E+S
Sbjct: 1418 RSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES 1468
Score = 173 (66.0 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 49/197 (24%), Positives = 95/197 (48%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPI 146
RP +K+ P+ M I D + N+K G L + FI++P +++ P Y+E++ P+
Sbjct: 1344 RPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPV 1403
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 206
DF KI+++++ +Y L D + D+ +L+ N F ++ D S F++ + +
Sbjct: 1404 DFKKIKERIRNHKYRSLGDLEKDV-MLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1462
Query: 207 VKNAKTFYKRNSQEHRDAQELMEL-FHSTRNKL-LNPQSHEGTSQKRSMDFMMASETED- 263
K ++ + N E D +E E S + K+ LN + + + + ++ +
Sbjct: 1463 AKEEESEDESNDDEDEDDEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPV 1522
Query: 264 -SRDSSICTEDEQNQCE 279
S D S +DE +Q E
Sbjct: 1523 VSDDDSDEDQDENDQSE 1539
Score = 41 (19.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 354 FNEPGSQIY 362
FNEPGSQ +
Sbjct: 1086 FNEPGSQYF 1094
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 229 (85.7 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 45/103 (43%), Positives = 68/103 (66%)
Query: 277 QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
Q + + V+ D+ R L EVF LPS+K PEYY++I P+D + I RI++ KY S
Sbjct: 1368 QMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRS 1427
Query: 337 LGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
LGD+EKD++L+ NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 1428 LGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1470
Score = 196 (74.1 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 38/111 (34%), Positives = 69/111 (62%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
++M + +T+ + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1367 KQMNAIIDTVINY-KDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1425
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L ++ D + + NA +N S IY+D++ LQ + + + ++E+S
Sbjct: 1426 RSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES 1476
Score = 169 (64.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 50/198 (25%), Positives = 95/198 (47%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPI 146
RP +K+ P+ M I D + N+K G L + FI++P +++ P Y+E++ P+
Sbjct: 1352 RPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPV 1411
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 206
DF KI+++++ +Y L D + D+ +L+ N F ++ D S F++ + +
Sbjct: 1412 DFKKIKERIRNHKYRSLGDLEKDV-MLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1470
Query: 207 VKNAKTFYKRNSQEHRDAQELMEL-FHSTRNKL-LNPQSHEGTSQ---KRSMDFMMASET 261
K ++ + N +E + +E E S + K+ LN + +G + K+ + A
Sbjct: 1471 AKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPV 1530
Query: 262 EDSRDSSICTEDEQNQCE 279
DS +DE Q E
Sbjct: 1531 VSDFDSDE-EQDENEQSE 1547
Score = 45 (20.9 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T N+ + Q ++A+ +KL + +K+E E+
Sbjct: 382 MRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQER 424
Score = 41 (19.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 354 FNEPGSQIY 362
FNEPGSQ +
Sbjct: 1094 FNEPGSQYF 1102
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 229 (85.7 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 45/103 (43%), Positives = 68/103 (66%)
Query: 277 QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
Q + + V+ D+ R L EVF LPS+K PEYY++I P+D + I RI++ KY S
Sbjct: 1370 QMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRS 1429
Query: 337 LGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
LGD+EKD++L+ NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 1430 LGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1472
Score = 196 (74.1 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 38/111 (34%), Positives = 69/111 (62%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
++M + +T+ + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1369 KQMNAIIDTVINY-KDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1427
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L ++ D + + NA +N S IY+D++ LQ + + + ++E+S
Sbjct: 1428 RSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES 1478
Score = 169 (64.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 50/198 (25%), Positives = 95/198 (47%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPI 146
RP +K+ P+ M I D + N+K G L + FI++P +++ P Y+E++ P+
Sbjct: 1354 RPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPV 1413
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 206
DF KI+++++ +Y L D + D+ +L+ N F ++ D S F++ + +
Sbjct: 1414 DFKKIKERIRNHKYRSLGDLEKDV-MLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1472
Query: 207 VKNAKTFYKRNSQEHRDAQELMEL-FHSTRNKL-LNPQSHEGTSQ---KRSMDFMMASET 261
K ++ + N +E + +E E S + K+ LN + +G + K+ + A
Sbjct: 1473 AKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPV 1532
Query: 262 EDSRDSSICTEDEQNQCE 279
DS +DE Q E
Sbjct: 1533 VSDFDSDE-EQDENEQSE 1549
Score = 45 (20.9 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T N+ + Q ++A+ +KL + +K+E E+
Sbjct: 384 MRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQER 426
Score = 41 (19.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 354 FNEPGSQIY 362
FNEPGSQ +
Sbjct: 1096 FNEPGSQYF 1104
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 229 (85.7 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 45/103 (43%), Positives = 68/103 (66%)
Query: 277 QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
Q + + V+ D+ R L EVF LPS+K PEYY++I P+D + I RI++ KY S
Sbjct: 1370 QMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRS 1429
Query: 337 LGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
LGD+EKD++L+ NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 1430 LGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1472
Score = 196 (74.1 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 38/111 (34%), Positives = 69/111 (62%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
++M + +T+ + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1369 KQMNAIIDTVINY-KDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1427
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L ++ D + + NA +N S IY+D++ LQ + + + ++E+S
Sbjct: 1428 RSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES 1478
Score = 169 (64.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 50/198 (25%), Positives = 95/198 (47%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPI 146
RP +K+ P+ M I D + N+K G L + FI++P +++ P Y+E++ P+
Sbjct: 1354 RPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPV 1413
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 206
DF KI+++++ +Y L D + D+ +L+ N F ++ D S F++ + +
Sbjct: 1414 DFKKIKERIRNHKYRSLGDLEKDV-MLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1472
Query: 207 VKNAKTFYKRNSQEHRDAQELMEL-FHSTRNKL-LNPQSHEGTSQ---KRSMDFMMASET 261
K ++ + N +E + +E E S + K+ LN + +G + K+ + A
Sbjct: 1473 AKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPV 1532
Query: 262 EDSRDSSICTEDEQNQCE 279
DS +DE Q E
Sbjct: 1533 VSDFDSDE-EQDENEQSE 1549
Score = 45 (20.9 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T N+ + Q ++A+ +KL + +K+E E+
Sbjct: 383 MRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQER 425
Score = 41 (19.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 354 FNEPGSQIY 362
FNEPGSQ +
Sbjct: 1096 FNEPGSQYF 1104
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 227 (85.0 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 45/103 (43%), Positives = 68/103 (66%)
Query: 277 QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
Q + + V+ D+ R L EVF LPS+K PEYY++I P+D + I RI++ KY S
Sbjct: 1391 QMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRS 1450
Query: 337 LGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
LGD+EKD++L+ NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 1451 LGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1493
Score = 200 (75.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 39/111 (35%), Positives = 69/111 (62%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
++M + +T+ + +GRQLS +F +LPSR D P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1390 KQMNAIIDTVINY-KDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKY 1448
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L ++ D + + NA +N S IY+D++ LQ + + + ++E+S
Sbjct: 1449 RSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES 1499
Score = 170 (64.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 43/162 (26%), Positives = 82/162 (50%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPI 146
RP +K+ P+ M I D + N+K G L + FI++P ++ P Y+E++ P+
Sbjct: 1375 RPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPV 1434
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 206
DF KI+++++ +Y L D + D+ +L+ N F ++ D S F++ + +
Sbjct: 1435 DFKKIKERIRNHKYRSLGDLEKDV-MLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1493
Query: 207 VKNAKTFYKRNSQEHRDAQELMEL-FHSTRNKL-LNPQSHEG 246
K ++ + N +E D +E E S + K+ LN + +G
Sbjct: 1494 AKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKG 1535
Score = 140 (54.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 48/177 (27%), Positives = 82/177 (46%)
Query: 89 MQTRPKRKKIDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKK--RQEPSYHEVVTNPI 146
++ R +R+ +D D +++ DV KK G + P K +Q + + V N
Sbjct: 1348 LKKRKRRRNVD-KDPVKE--DV-EKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYK 1403
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 206
D Q + D EL + P+DF KI+++++ +Y L D + D+ LL
Sbjct: 1404 DSSGRQLSEVFIQLPSRKDLPEYYEL--IRKPVDFKKIKERIRNHKYRSLGDLEKDVMLL 1461
Query: 207 VKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQ-SHEGTSQKRSMDFMMASETE 262
NA+TF SQ + D+ L +F S R K+ + S E ++++ D SE+E
Sbjct: 1462 CHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESE 1518
Score = 45 (20.9 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T N+ + Q ++A+ +KL + +K+E E+
Sbjct: 405 MRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQER 447
Score = 41 (19.5 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 354 FNEPGSQIY 362
FNEPGSQ +
Sbjct: 1117 FNEPGSQYF 1125
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 223 (83.6 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 50/126 (39%), Positives = 77/126 (61%)
Query: 281 LFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGD 339
+ +AV+ D+ S R L EVF LPS+K PEYY++I P+D + I RI++ KY SL D
Sbjct: 684 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 743
Query: 340 MEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIR 399
+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+ + +SE
Sbjct: 744 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEE 803
Query: 400 GGQSLS 405
G +S S
Sbjct: 804 GSESES 809
Score = 206 (77.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 38/111 (34%), Positives = 71/111 (63%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 679 KKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 738
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L+++ D + + NA +N S IY+D++ LQ + + + +++DS
Sbjct: 739 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 789
Score = 145 (56.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 46/200 (23%), Positives = 96/200 (48%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFK-KEDGALLCDPFIRIPKKRQEPSYHEVVTNP 145
RP +K+ P+ M++I D + +K G L + FI++P +++ P Y+E++ P
Sbjct: 664 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKP 723
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIEL 205
+DF KI+++++ +Y L+D + D+ +L+ N F ++ L Y+D Q+
Sbjct: 724 VDFKKIKERIRNHKYRSLNDLEKDV-MLLCQNAQTF-NLEGSLI---YEDSIVLQSVFTS 778
Query: 206 LVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSR 265
+ + + +E + +E E + ++ + + G +K + D + SR
Sbjct: 779 VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEK-AQDRLKGGRRRPSR 837
Query: 266 DSS---ICTED--EQNQCED 280
S + ++D E+ Q ED
Sbjct: 838 GSRAKPVVSDDDSEEEQEED 857
Score = 43 (20.2 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 353 TFNEPGSQIY 362
TFNEPGS+ +
Sbjct: 393 TFNEPGSEYF 402
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 223 (83.6 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 51/124 (41%), Positives = 74/124 (59%)
Query: 283 NAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEK 342
+AV+ D + R L EVF LPS+K PEYY++I P+D R I RI+ KY SL D+EK
Sbjct: 1449 DAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHKYRSLNDLEK 1508
Query: 343 DLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGK-SERIRSKRIRGG 401
D++L+ +NA TFN GS IY+D+ L+ + + + +IE+ + G SE G
Sbjct: 1509 DVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEEESEGDDSEEEEDDVDEGS 1568
Query: 402 QSLS 405
+S S
Sbjct: 1569 ESES 1572
Score = 193 (73.0 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 38/97 (39%), Positives = 62/97 (63%)
Query: 479 GRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNAC 538
GRQLS +F +LPSR + P+YYE+IRKPVD I ++R ++Y L+++ D + + NA
Sbjct: 1459 GRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQ 1518
Query: 539 KYNEPDSHIYKDALSLQRIVLQTKMHL-REDEDSVPD 574
+N S IY+D++ LQ + + + +E+E+S D
Sbjct: 1519 TFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEEESEGD 1555
Score = 147 (56.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 26/87 (29%), Positives = 54/87 (62%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPI 146
RP +K+ P+ M++ D + +K +G L + FI++P +++ P Y+E++ P+
Sbjct: 1427 RPPAEKLSPNPPSLTKKMKKTVDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKPV 1486
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELL 173
DF KI++++++ +Y L+D + D+ LL
Sbjct: 1487 DFRKIKERIRSHKYRSLNDLEKDVMLL 1513
Score = 129 (50.5 bits), Expect = 0.00029, P = 0.00029
Identities = 31/98 (31%), Positives = 55/98 (56%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+DF KI++++++ +Y L+D + D+ LL +NA+TF S + D+ L +F S
Sbjct: 1481 LIRKPVDFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTS 1540
Query: 234 TRNKLLNPQSH-EGT-SQKRSMDFMMASETEDSRDSSI 269
R K+ + EG S++ D SE+E SR +
Sbjct: 1541 VRQKIEKEEEESEGDDSEEEEDDVDEGSESE-SRSVKV 1577
Score = 47 (21.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T NA + Q ++A+ +KL + +K+E E+
Sbjct: 442 MRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 484
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 228 (85.3 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 49/125 (39%), Positives = 76/125 (60%)
Query: 281 LFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
+ +AV+ D+ R L EVF LPS+K PEYY++I P+D + I RI++ KY SL D+
Sbjct: 1432 IVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDL 1491
Query: 341 EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRG 400
EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+ + +SE G
Sbjct: 1492 EKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEG 1551
Query: 401 GQSLS 405
+S S
Sbjct: 1552 SESES 1556
Score = 199 (75.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 38/111 (34%), Positives = 71/111 (63%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1427 KKMKKIVDAVIKY-KDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1485
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L+++ D + + NA +N S IY+D++ LQ + + + +++DS
Sbjct: 1486 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1536
Score = 153 (58.9 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 46/199 (23%), Positives = 96/199 (48%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPI 146
RP +K+ P+ M++I D + +K G L + FI++P +++ P Y+E++ P+
Sbjct: 1412 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPV 1471
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 206
DF KI+++++ +Y L+D + D+ +L+ N F ++ L Y+D Q+ +
Sbjct: 1472 DFKKIKERIRNHKYRSLNDLEKDV-MLLCQNAQTF-NLEGSLI---YEDSIVLQSVFTSV 1526
Query: 207 VKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRD 266
+ + +E + +E E + ++ + + G +K + D + SR
Sbjct: 1527 RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEK-AQDRLKGGRRRPSRG 1585
Query: 267 SS---ICTED--EQNQCED 280
S + ++D E+ Q ED
Sbjct: 1586 SRAKPVVSDDDSEEEQEED 1604
Score = 130 (50.8 bits), Expect = 0.00022, P = 0.00022
Identities = 40/154 (25%), Positives = 69/154 (44%)
Query: 131 KKRQEPSYHEVVTNPIDFIKIQQKL--KTDEYDDLSDFQAD---IELL----------VV 175
KKR P ++ NP + K +K+ +Y D S Q I+L ++
Sbjct: 1408 KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELI 1467
Query: 176 TNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTR 235
P+DF KI+++++ +Y L+D + D+ LL +NA+TF S + D+ L +F S R
Sbjct: 1468 RKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVR 1527
Query: 236 NKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSI 269
K+ EG + + +SR +
Sbjct: 1528 QKIEKEDDSEGEESEEEEEGEEEGSESESRSVKV 1561
Score = 47 (21.6 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T NA + Q ++A+ +KL + +K+E E+
Sbjct: 424 MRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Score = 43 (20.2 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 353 TFNEPGSQIY 362
TFNEPGS+ +
Sbjct: 1141 TFNEPGSEYF 1150
Score = 40 (19.1 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 99 DPSDAMQQIYDV-IRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+P D Q+ D+ ++ E G +L PK Q ++ E+ NP + + +
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGT--DAPKAGQLEAWLEM--NPGYEVAPRSDSEE 659
Query: 158 DEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAK 211
++ + + + + P ++ ++K+ + DD+S+ D +++NAK
Sbjct: 660 SGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSE--VDARHIIENAK 711
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 228 (85.3 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 49/125 (39%), Positives = 76/125 (60%)
Query: 281 LFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
+ +AV+ D+ R L EVF LPS+K PEYY++I P+D + I RI++ KY SL D+
Sbjct: 1432 IVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDL 1491
Query: 341 EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRG 400
EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+ + +SE G
Sbjct: 1492 EKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEG 1551
Query: 401 GQSLS 405
+S S
Sbjct: 1552 SESES 1556
Score = 199 (75.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 38/111 (34%), Positives = 71/111 (63%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1427 KKMKKIVDAVIKY-KDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1485
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L+++ D + + NA +N S IY+D++ LQ + + + +++DS
Sbjct: 1486 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1536
Score = 152 (58.6 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 27/87 (31%), Positives = 53/87 (60%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPI 146
RP +K+ P+ M++I D + +K G L + FI++P +++ P Y+E++ P+
Sbjct: 1412 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPV 1471
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELL 173
DF KI+++++ +Y L+D + D+ LL
Sbjct: 1472 DFKKIKERIRNHKYRSLNDLEKDVMLL 1498
Score = 130 (50.8 bits), Expect = 0.00022, P = 0.00022
Identities = 40/154 (25%), Positives = 69/154 (44%)
Query: 131 KKRQEPSYHEVVTNPIDFIKIQQKL--KTDEYDDLSDFQAD---IELL----------VV 175
KKR P ++ NP + K +K+ +Y D S Q I+L ++
Sbjct: 1408 KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELI 1467
Query: 176 TNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTR 235
P+DF KI+++++ +Y L+D + D+ LL +NA+TF S + D+ L +F S R
Sbjct: 1468 RKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVR 1527
Query: 236 NKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSI 269
K+ EG + + +SR +
Sbjct: 1528 QKIEKEDDSEGEESEEEEEGEEEGSESESRSVKV 1561
Score = 47 (21.6 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T NA + Q ++A+ +KL + +K+E E+
Sbjct: 424 MRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Score = 43 (20.2 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 353 TFNEPGSQIY 362
TFNEPGS+ +
Sbjct: 1141 TFNEPGSEYF 1150
Score = 40 (19.1 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 99 DPSDAMQQIYDV-IRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+P D Q+ D+ ++ E G +L PK Q ++ E+ NP + + +
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGT--DAPKAGQLEAWLEM--NPGYEVAPRSDSEE 659
Query: 158 DEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAK 211
++ + + + + P ++ ++K+ + DD+S+ D +++NAK
Sbjct: 660 SGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSE--VDARHIIENAK 711
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 217 (81.4 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 42/90 (46%), Positives = 63/90 (70%)
Query: 290 DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
++ R L EVF LPS+K PEYY++I P+D + I RI++ KY SLGD+EKD++L+
Sbjct: 1401 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1460
Query: 350 NACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 1461 NAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1490
Score = 194 (73.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/94 (38%), Positives = 61/94 (64%)
Query: 478 TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
+GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y L ++ D + + NA
Sbjct: 1403 SGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNA 1462
Query: 538 CKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
+N S IY+D++ LQ + + + ++E+S
Sbjct: 1463 QTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES 1496
Score = 136 (52.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 41/166 (24%), Positives = 81/166 (48%)
Query: 119 GALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNP 178
G L + FI++P +++ P Y+E++ P+DF KI+++++ +Y L D + D+ +L+ N
Sbjct: 1404 GRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDV-MLLCHNA 1462
Query: 179 IDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMEL-FHSTRNK 237
F ++ D S F++ + + K ++ + N +E + +E E S + K
Sbjct: 1463 QTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVK 1522
Query: 238 L-LNPQSHEGTSQ---KRSMDFMMASETEDSRDSSICTEDEQNQCE 279
+ LN + +G + K+ + A DS +DE Q E
Sbjct: 1523 IKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDE-EQDENEQSE 1567
Score = 132 (51.5 bits), Expect = 0.00013, P = 0.00013
Identities = 29/107 (27%), Positives = 55/107 (51%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+DF KI+++++ +Y L D + D+ LL NA+TF SQ + D+ L +F S
Sbjct: 1426 LIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKS 1485
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCED 280
R K+ + E S + + E +S S+ + + N+ ++
Sbjct: 1486 ARQKIAKEEESEDESNEEEEE--EDEEESESEAKSVKVKIKLNKKDE 1530
Score = 45 (20.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T N+ + Q ++A+ +KL + +K+E E+
Sbjct: 384 MRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQER 426
Score = 41 (19.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 354 FNEPGSQIY 362
FNEPGSQ +
Sbjct: 1096 FNEPGSQYF 1104
>SGD|S000003288 [details] [associations]
symbol:RSC1 "Component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016586 "RSC
complex" evidence=IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IC;ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IC;ISS] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IPI] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030435 "sporulation resulting in formation of a
cellular spore" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0042173 "regulation of sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] InterPro:IPR001025 InterPro:IPR001487
InterPro:IPR027180 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
SGD:S000003288 GO:GO:0006355 EMBL:BK006941 GO:GO:0003677
GO:GO:0030435 GO:GO:0006368 GO:GO:0006337 GO:GO:0016586
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 GO:GO:0006303 EMBL:DQ115391
GO:GO:0042173 GeneTree:ENSGT00390000003017 KO:K11756
OrthoDB:EOG4D5673 EMBL:Z72841 PIR:S64350 RefSeq:NP_011570.1
ProteinModelPortal:P53236 SMR:P53236 DIP:DIP-984N IntAct:P53236
MINT:MINT-493686 STRING:P53236 PaxDb:P53236 EnsemblFungi:YGR056W
GeneID:852947 KEGG:sce:YGR056W CYGD:YGR056w HOGENOM:HOG000247903
OMA:YNESDKV NextBio:972696 Genevestigator:P53236 GermOnline:YGR056W
PANTHER:PTHR16062:SF3 Uniprot:P53236
Length = 928
Score = 145 (56.1 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 33/94 (35%), Positives = 50/94 (53%)
Query: 282 FNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDME 341
++AV D + ++ +F +LP KK YP+YY +I PI L T+ +R+ Y S D
Sbjct: 17 YDAVFHLKDENGIEIYPIFNVLPPKKEYPDYYIIIRNPISLNTLKKRLPH--YTSPQDFV 74
Query: 342 KDLILMTKNACTFNEPGSQIYKDAKALKKLVQTK 375
D + NA T+N S IYK A L+ ++ K
Sbjct: 75 NDFAQIPWNAMTYNAKDSVIYKYAILLESFIKGK 108
Score = 145 (56.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 35/106 (33%), Positives = 57/106 (53%)
Query: 460 LQKM-RILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYN 518
LQK+ + Y+ + + + G ++ IF LP + +YPDYY +IR P+ + + +L +
Sbjct: 9 LQKLLKTQYDAVFHL-KDENGIEIYPIFNVLPPKKEYPDYYIIIRNPISLNTLKKRLPH- 66
Query: 519 QYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMH 564
Y + V DF Q+ NA YN DS IYK A+ L+ + +H
Sbjct: 67 -YTSPQDFVNDFAQIPWNAMTYNAKDSVIYKYAILLESFIKGKIVH 111
Score = 121 (47.7 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 477 KTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDN 536
+ + L+ F++LP R++ P YY VI P+ + I K++ +Y + DF M N
Sbjct: 254 QNNKTLTLCFEKLPDRNEEPTYYSVITDPICLMDIRKKVKSRKYRNFHTFEEDFQLMLTN 313
Query: 537 -ACKYNEPDSHIYKDALSLQRIVLQTKMHL-REDEDSVPDVPAAVQELLTSLFTSVYNHQ 594
Y++ S+I + L + ++ L + DED +P+ EL L N +
Sbjct: 314 FKLYYSQDQSNIIRAQLLEKNFNRLVRIELSKPDEDYLPE-----GELRYPLDDVEINDE 368
Query: 595 KQCLGSFHVL---NVDNKPLKRRLYTL 618
K +G + +L N NKP+ +++ L
Sbjct: 369 KYQIGDWVLLHNPNDINKPIVGQIFRL 395
Score = 103 (41.3 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 279 EDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLG 338
+++ + D +++ L F+ LP + P YY VI PI L I ++++ KY +
Sbjct: 242 KNILKMMRREVDQNNKTLTLCFEKLPDRNEEPTYYSVITDPICLMDIRKKVKSRKYRNFH 301
Query: 339 DMEKDLILMTKN-ACTFNEPGSQIYKDAKALKK 370
E+D LM N +++ S I + A+ L+K
Sbjct: 302 TFEEDFQLMLTNFKLYYSQDQSNIIR-AQLLEK 333
Score = 90 (36.7 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
V+T+PI + I++K+K+ +Y + F+ D +L++ N K +Y ++ AQ L + F+
Sbjct: 278 VITDPICLMDIRKKVKSRKYRNFHTFEEDFQLMLTNFKLYYSQDQSNIIRAQLLEKNFNR 337
Query: 234 -TRNKLLNP 241
R +L P
Sbjct: 338 LVRIELSKP 346
Score = 86 (35.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 108 YDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLK--TDEYDDLSD 165
YD + + K E+G + F +P K++ P Y+ ++ NPI ++++L T D ++D
Sbjct: 17 YDAVFHLKDENGIEIYPIFNVLPPKKEYPDYYIIIRNPISLNTLKKRLPHYTSPQDFVND 76
Query: 166 F 166
F
Sbjct: 77 F 77
Score = 54 (24.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 173 LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFH 232
+++ NPI ++++L Y DF D + NA T+ ++S ++ A L+E F
Sbjct: 49 IIIRNPISLNTLKKRLP--HYTSPQDFVNDFAQIPWNAMTYNAKDSVIYKYAI-LLESF- 104
Query: 233 STRNKLL-NPQSH 244
+ K++ N + H
Sbjct: 105 -IKGKIVHNIRKH 116
Score = 52 (23.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 610 PLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKV 652
P R+ + K + DQ+ + L F +LP P YY V
Sbjct: 236 PYVLRIKNILKMMRREVDQNNKTLTLCFEKLPDRNEEPTYYSV 278
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 536 NACKYNEPDSHIYK-DALSLQRIVLQT 561
NAC Y P+ +++ D L + V++T
Sbjct: 406 NACWYFRPEQTVHRVDRLFYKNEVMKT 432
Score = 39 (18.8 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 500 EVIRKPVDMEMIASKLRYNQYEHLDEMVA----DFIQ-MFDNACKYNEPDS 545
+++R P++ +K R YE ++E V DF + M N +N P S
Sbjct: 798 DLVRVPLNRWFCKNKRRKLDYEDIEEDVMEPPNDFSEDMIANI--FNPPPS 846
Score = 38 (18.4 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 320 IDLRTIARRIQDGKYASLGDMEKD 343
+DL TIA DGK + +D
Sbjct: 866 MDLSTIASGDNDGKECDTAEESED 889
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 217 (81.4 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 42/90 (46%), Positives = 63/90 (70%)
Query: 290 DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
++ R L EVF LPS+K PEYY++I P+D + I RI++ KY SLGD+EKD++L+
Sbjct: 1417 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1476
Query: 350 NACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 1477 NAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1506
Score = 194 (73.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/94 (38%), Positives = 61/94 (64%)
Query: 478 TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
+GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y L ++ D + + NA
Sbjct: 1419 SGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNA 1478
Query: 538 CKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
+N S IY+D++ LQ + + + ++E+S
Sbjct: 1479 QTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES 1512
Score = 136 (52.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 30/107 (28%), Positives = 55/107 (51%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+DF KI+++++ +Y L D + D+ LL NA+TF SQ + D+ L +F S
Sbjct: 1442 LIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKS 1501
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCED 280
R K+ + E S + + E +S S+ + + N+ +D
Sbjct: 1502 ARQKIAKEEESEDESNEEEEE--EDEEESESEAKSVKVKIKLNKKDD 1546
Score = 136 (52.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 41/166 (24%), Positives = 82/166 (49%)
Query: 119 GALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNP 178
G L + FI++P +++ P Y+E++ P+DF KI+++++ +Y L D + D+ +L+ N
Sbjct: 1420 GRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDV-MLLCHNA 1478
Query: 179 IDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMEL-FHSTRNK 237
F ++ D S F++ + + K ++ + N +E + +E E S + K
Sbjct: 1479 QTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVK 1538
Query: 238 L-LNPQSHEGTSQ---KRSMDFMMASETEDSRDSSICTEDEQNQCE 279
+ LN + +G + K+ + A DS +DE+ Q E
Sbjct: 1539 IKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDFDSDE-EQDEREQSE 1583
Score = 45 (20.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T N+ + Q ++A+ +KL + +K+E E+
Sbjct: 400 MRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQER 442
Score = 41 (19.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 354 FNEPGSQIY 362
FNEPGSQ +
Sbjct: 1112 FNEPGSQYF 1120
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 217 (81.4 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 42/90 (46%), Positives = 63/90 (70%)
Query: 290 DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
++ R L EVF LPS+K PEYY++I P+D + I RI++ KY SLGD+EKD++L+
Sbjct: 1424 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1483
Query: 350 NACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 1484 NAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1513
Score = 194 (73.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/94 (38%), Positives = 61/94 (64%)
Query: 478 TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
+GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y L ++ D + + NA
Sbjct: 1426 SGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNA 1485
Query: 538 CKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
+N S IY+D++ LQ + + + ++E+S
Sbjct: 1486 QTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES 1519
Score = 137 (53.3 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 42/166 (25%), Positives = 82/166 (49%)
Query: 119 GALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNP 178
G L + FI++P +++ P Y+E++ P+DF KI+++++ +Y L D + D+ +L+ N
Sbjct: 1427 GRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDV-MLLCHNA 1485
Query: 179 IDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMEL-FHSTRNK 237
F ++ D S F++ + + K ++ + N +E + +E E S + K
Sbjct: 1486 QTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEEDEEESEAEAKSVKVK 1545
Query: 238 L-LNPQSHEG--TSQ-KRSMDFMMASETEDSRDSSICTEDEQNQCE 279
+ LN + +G T + K+ + A DS +DE Q E
Sbjct: 1546 IKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDE-EQDENEQSE 1590
Score = 45 (20.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T N+ + Q ++A+ +KL + +K+E E+
Sbjct: 407 MRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQER 449
Score = 41 (19.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 354 FNEPGSQIY 362
FNEPGSQ +
Sbjct: 1119 FNEPGSQYF 1127
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 217 (81.4 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 42/90 (46%), Positives = 63/90 (70%)
Query: 290 DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
++ R L EVF LPS+K PEYY++I P+D + I RI++ KY SLGD+EKD++L+
Sbjct: 1424 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1483
Query: 350 NACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
NA TFN GSQIY+D+ L+ + ++ + +I
Sbjct: 1484 NAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1513
Score = 194 (73.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/94 (38%), Positives = 61/94 (64%)
Query: 478 TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
+GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y L ++ D + + NA
Sbjct: 1426 SGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNA 1485
Query: 538 CKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
+N S IY+D++ LQ + + + ++E+S
Sbjct: 1486 QTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES 1519
Score = 137 (53.3 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 42/166 (25%), Positives = 82/166 (49%)
Query: 119 GALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNP 178
G L + FI++P +++ P Y+E++ P+DF KI+++++ +Y L D + D+ +L+ N
Sbjct: 1427 GRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDV-MLLCHNA 1485
Query: 179 IDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMEL-FHSTRNK 237
F ++ D S F++ + + K ++ + N +E + +E E S + K
Sbjct: 1486 QTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEEDEEESEAEAKSVKVK 1545
Query: 238 L-LNPQSHEG--TSQ-KRSMDFMMASETEDSRDSSICTEDEQNQCE 279
+ LN + +G T + K+ + A DS +DE Q E
Sbjct: 1546 IKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDE-EQDENEQSE 1590
Score = 45 (20.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T N+ + Q ++A+ +KL + +K+E E+
Sbjct: 407 MRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQER 449
Score = 41 (19.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 354 FNEPGSQIY 362
FNEPGSQ +
Sbjct: 1119 FNEPGSQYF 1127
>SGD|S000004349 [details] [associations]
symbol:RSC2 "Component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016586 "RSC
complex" evidence=IEA;IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IDA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IPI] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030435 "sporulation resulting in formation of a cellular
spore" evidence=IEA] [GO:0006276 "plasmid maintenance"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IDA] [GO:0015616 "DNA translocase
activity" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0007059 "chromosome segregation" evidence=IGI] [GO:0007062
"sister chromatid cohesion" evidence=IMP] InterPro:IPR001025
InterPro:IPR001487 InterPro:IPR027180 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 SGD:S000004349 GO:GO:0006355 GO:GO:0003677
EMBL:BK006945 GO:GO:0030435 GO:GO:0000724 GO:GO:0006368
GO:GO:0006276 GO:GO:0006337 GO:GO:0016586 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 EMBL:U19102 GO:GO:0006303 GO:GO:0007062
GO:GO:0042173 GeneTree:ENSGT00390000003017 KO:K11756
OrthoDB:EOG4D5673 HOGENOM:HOG000247903 PANTHER:PTHR16062:SF3
PIR:S51465 RefSeq:NP_013461.1 ProteinModelPortal:Q06488 SMR:Q06488
DIP:DIP-863N IntAct:Q06488 MINT:MINT-666605 STRING:Q06488
PaxDb:Q06488 PeptideAtlas:Q06488 EnsemblFungi:YLR357W GeneID:851071
KEGG:sce:YLR357W CYGD:YLR357w OMA:WFICEFR NextBio:967717
Genevestigator:Q06488 GermOnline:YLR357W Uniprot:Q06488
Length = 889
Score = 154 (59.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 39/110 (35%), Positives = 57/110 (51%)
Query: 458 ASLQKMRILYNTIKE------TCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMI 511
+S Q LY +++ T + +G ++S IF LP + DYPDYY VI+ PV +
Sbjct: 9 SSTQNSSALYKDLRKEYESLFTLKEDSGLEISPIFNVLPPKKDYPDYYAVIKNPVSFNTL 68
Query: 512 ASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQT 561
K R Y + + D +Q+ NA YN DS IYK AL L++ + T
Sbjct: 69 --KKRIPHYTDAQQFMNDVVQIPWNAKTYNTRDSGIYKYALVLEKYLKDT 116
Score = 141 (54.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 256 MMASETEDS--RDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYY 313
MM + +S ++SS +D + + E LF T + + +F +LP KK YP+YY
Sbjct: 1 MMPDDNSNSSTQNSSALYKDLRKEYESLF----TLKEDSGLEISPIFNVLPPKKDYPDYY 56
Query: 314 DVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQ 373
VI P+ T+ +RI Y D++ + NA T+N S IYK A L+K ++
Sbjct: 57 AVIKNPVSFNTLKKRIPH--YTDAQQFMNDVVQIPWNAKTYNTRDSGIYKYALVLEKYLK 114
Score = 123 (48.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 44/176 (25%), Positives = 82/176 (46%)
Query: 460 LQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQ 519
+Q+M+ + +K+ +G L+ +F+RLP RH +YY +I P+ ++ I K++ +
Sbjct: 278 IQRMKNVMKVLKKEVLD-SGIGLTDLFERLPDRHRDANYYIMIANPISLQDINKKVKTRR 336
Query: 520 YEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPD---VP 576
Y+ E DF M N + D +++ + I+ +T L E S PD +P
Sbjct: 337 YKTFQEFQNDFNLMLTNFRISHRGDP----ESIKISNILEKTFTSLARFELSKPDRSFIP 392
Query: 577 AAVQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTLCKCLMDYRDQDGRQ 632
EL L + N+ +G + +L N P K + + + ++ DG+Q
Sbjct: 393 EG--ELRYPLDEVIVNNISYHVGDWALLRNQNDPQKPIVGQIFRL---WKTPDGKQ 443
Score = 96 (38.9 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 38/158 (24%), Positives = 64/158 (40%)
Query: 236 NKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSR- 294
N+ P SH GT Q S T+ R + Q V+ DS
Sbjct: 239 NRSTTP-SHSGTPQPLGPRHRQVSRTQVKRGRPPIIDLPYIQRMKNVMKVLKKEVLDSGI 297
Query: 295 PLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTF 354
L ++F+ LP + R YY +I PI L+ I ++++ +Y + + + D LM N
Sbjct: 298 GLTDLFERLPDRHRDANYYIMIANPISLQDINKKVKTRRYKTFQEFQNDFNLMLTNFRIS 357
Query: 355 NEPGSQIYKDAKALKK-LVQTKKMEIEQG--KFTPAGK 389
+ + K + L+K + E+ + F P G+
Sbjct: 358 HRGDPESIKISNILEKTFTSLARFELSKPDRSFIPEGE 395
Score = 87 (35.7 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 116 KEDGALLCDPFIRI-PKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADI 170
KED L P + P K+ P Y+ V+ NP+ F +++++ Y D F D+
Sbjct: 32 KEDSGLEISPIFNVLPPKKDYPDYYAVIKNPVSFNTLKKRIP--HYTDAQQFMNDV 85
Score = 69 (29.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
V+ NP+ F +++++ Y D F D+ + NAKT+ R+S ++ A L +
Sbjct: 58 VIKNPVSFNTLKKRIP--HYTDAQQFMNDVVQIPWNAKTYNTRDSGIYKYALVLEKYLKD 115
Query: 234 T 234
T
Sbjct: 116 T 116
Score = 42 (19.8 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 536 NACKYNEPDSHIYK-DALSLQRIVLQT 561
NAC Y P+ +++ D L + V++T
Sbjct: 446 NACWYYRPEQTVHRVDRLFYKNEVMKT 472
Score = 40 (19.1 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 461 QKMRILYNTIKETCEPKTGR 480
+K ++ Y ++ET E TG+
Sbjct: 823 KKRKLEYEEVEETMEDVTGK 842
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 505 PVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDAL 552
P++ +K R +YE ++E + D + D EPD K++L
Sbjct: 814 PLNRWFTTNKKRKLEYEEVEETMED-VTGKDKDDDGLEPDVENEKESL 860
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 223 (83.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 50/126 (39%), Positives = 77/126 (61%)
Query: 281 LFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGD 339
+ +AV+ D+ S R L EVF LPS+K PEYY++I P+D + I RI++ KY SL D
Sbjct: 798 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 857
Query: 340 MEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIR 399
+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+ + +SE
Sbjct: 858 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEE 917
Query: 400 GGQSLS 405
G +S S
Sbjct: 918 GSESES 923
Score = 206 (77.6 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 38/111 (34%), Positives = 71/111 (63%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 793 KKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 852
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L+++ D + + NA +N S IY+D++ LQ + + + +++DS
Sbjct: 853 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 903
Score = 145 (56.1 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 46/200 (23%), Positives = 96/200 (48%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFK-KEDGALLCDPFIRIPKKRQEPSYHEVVTNP 145
RP +K+ P+ M++I D + +K G L + FI++P +++ P Y+E++ P
Sbjct: 778 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKP 837
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIEL 205
+DF KI+++++ +Y L+D + D+ +L+ N F ++ L Y+D Q+
Sbjct: 838 VDFKKIKERIRNHKYRSLNDLEKDV-MLLCQNAQTF-NLEGSLI---YEDSIVLQSVFTS 892
Query: 206 LVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSR 265
+ + + +E + +E E + ++ + + G +K + D + SR
Sbjct: 893 VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEK-AQDRLKGGRRRPSR 951
Query: 266 DSS---ICTED--EQNQCED 280
S + ++D E+ Q ED
Sbjct: 952 GSRAKPVVSDDDSEEEQEED 971
Score = 43 (20.2 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 353 TFNEPGSQIY 362
TFNEPGS+ +
Sbjct: 474 TFNEPGSEYF 483
Score = 38 (18.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 182 IKIQQKLKTDEYDDLSDFQADIELLVKNAK 211
++ ++K+ + DD+S+ D +++NAK
Sbjct: 17 VEEKKKIPDPDSDDVSE--VDARHIIENAK 44
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 223 (83.6 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 50/126 (39%), Positives = 77/126 (61%)
Query: 281 LFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGD 339
+ +AV+ D+ S R L EVF LPS+K PEYY++I P+D + I RI++ KY SL D
Sbjct: 1465 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1524
Query: 340 MEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIR 399
+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+ + +SE
Sbjct: 1525 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEE 1584
Query: 400 GGQSLS 405
G +S S
Sbjct: 1585 GSESES 1590
Score = 206 (77.6 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 38/111 (34%), Positives = 71/111 (63%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1460 KKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1519
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L+++ D + + NA +N S IY+D++ LQ + + + +++DS
Sbjct: 1520 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1570
Score = 145 (56.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 46/200 (23%), Positives = 96/200 (48%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFK-KEDGALLCDPFIRIPKKRQEPSYHEVVTNP 145
RP +K+ P+ M++I D + +K G L + FI++P +++ P Y+E++ P
Sbjct: 1445 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKP 1504
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIEL 205
+DF KI+++++ +Y L+D + D+ +L+ N F ++ L Y+D Q+
Sbjct: 1505 VDFKKIKERIRNHKYRSLNDLEKDV-MLLCQNAQTF-NLEGSLI---YEDSIVLQSVFTS 1559
Query: 206 LVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSR 265
+ + + +E + +E E + ++ + + G +K + D + SR
Sbjct: 1560 VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEK-AQDRLKGGRRRPSR 1618
Query: 266 DSS---ICTED--EQNQCED 280
S + ++D E+ Q ED
Sbjct: 1619 GSRAKPVVSDDDSEEEQEED 1638
Score = 47 (21.6 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T NA + Q ++A+ +KL + +K+E E+
Sbjct: 424 MRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Score = 43 (20.2 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 353 TFNEPGSQIY 362
TFNEPGS+ +
Sbjct: 1141 TFNEPGSEYF 1150
Score = 42 (19.8 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 99 DPSDAMQQIYDV-IRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+P D Q+ D+ ++ E G +L PK Q ++ E+ NP + + +
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGT--DAPKAGQLEAWLEM--NPGYEVAPRSDSEE 659
Query: 158 DEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAK 211
++ + + + + P ++ ++K+ + DD+S+ D +++NAK
Sbjct: 660 SGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSE--VDARHIIENAK 711
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 223 (83.6 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 50/126 (39%), Positives = 77/126 (61%)
Query: 281 LFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGD 339
+ +AV+ D+ S R L EVF LPS+K PEYY++I P+D + I RI++ KY SL D
Sbjct: 1497 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1556
Query: 340 MEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIR 399
+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+ + +SE
Sbjct: 1557 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEE 1616
Query: 400 GGQSLS 405
G +S S
Sbjct: 1617 GSESES 1622
Score = 206 (77.6 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 38/111 (34%), Positives = 71/111 (63%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1492 KKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1551
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L+++ D + + NA +N S IY+D++ LQ + + + +++DS
Sbjct: 1552 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1602
Score = 145 (56.1 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 46/200 (23%), Positives = 96/200 (48%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFK-KEDGALLCDPFIRIPKKRQEPSYHEVVTNP 145
RP +K+ P+ M++I D + +K G L + FI++P +++ P Y+E++ P
Sbjct: 1477 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKP 1536
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIEL 205
+DF KI+++++ +Y L+D + D+ +L+ N F ++ L Y+D Q+
Sbjct: 1537 VDFKKIKERIRNHKYRSLNDLEKDV-MLLCQNAQTF-NLEGSLI---YEDSIVLQSVFTS 1591
Query: 206 LVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSR 265
+ + + +E + +E E + ++ + + G +K + D + SR
Sbjct: 1592 VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEK-AQDRLKGGRRRPSR 1650
Query: 266 DSS---ICTED--EQNQCED 280
S + ++D E+ Q ED
Sbjct: 1651 GSRAKPVVSDDDSEEEQEED 1670
Score = 47 (21.6 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T NA + Q ++A+ +KL + +K+E E+
Sbjct: 424 MRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Score = 43 (20.2 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 353 TFNEPGSQIY 362
TFNEPGS+ +
Sbjct: 1141 TFNEPGSEYF 1150
Score = 42 (19.8 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 99 DPSDAMQQIYDV-IRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+P D Q+ D+ ++ E G +L PK Q ++ E+ NP + + +
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGT--DAPKAGQLEAWLEM--NPGYEVAPRSDSEE 659
Query: 158 DEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAK 211
++ + + + + P ++ ++K+ + DD+S+ D +++NAK
Sbjct: 660 SGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSE--VDARHIIENAK 711
>ZFIN|ZDB-GENE-030131-267 [details] [associations]
symbol:brd4 "bromodomain containing 4" species:7955
"Danio rerio" [GO:0000793 "condensed chromosome" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 ZFIN:ZDB-GENE-030131-267
GO:GO:0005634 GO:GO:0042393 GO:GO:0000793 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00700000104261 EMBL:AL954361 IPI:IPI00882849
Ensembl:ENSDART00000114343 Ensembl:ENSDART00000115117 OMA:NGQPKHF
Uniprot:F1R5H6
Length = 1444
Score = 138 (53.6 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 45/147 (30%), Positives = 71/147 (48%)
Query: 274 EQNQCEDLFNAVMTST--DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQD 331
+ NQ + L V+ S + P H + K P+YY +I P+D+ TI +R++
Sbjct: 44 QTNQLQYLLKVVLKSLWKHQFAWPFHAPVDAV--KLNLPDYYKIIKNPMDMGTIKKRLES 101
Query: 332 GKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKF---TPAG 388
Y S + +D M N +N+PG I A+AL+K+ TK E+ Q + T AG
Sbjct: 102 AFYTSAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKVFLTKISEMPQQEVEISTTAG 161
Query: 389 KSERIRSKR-----IRGGQSLSAITAA 410
K R R +R ++ G L +TA+
Sbjct: 162 KG-RGRGRRDPDMNMKVGPVLEPLTAS 187
Score = 129 (50.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 31/85 (36%), Positives = 41/85 (48%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ I KL QY E AD MF N KYN PD + A LQ
Sbjct: 399 DYHDIIKHPMDLSTIKDKLETRQYREAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQD 458
Query: 557 IVLQ--TKMHLREDEDSVPDVPAAV 579
+ KM E E+ + PA V
Sbjct: 459 VFEMRFAKMP-DEPEEMLAPAPAPV 482
Score = 59 (25.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 24/91 (26%), Positives = 44/91 (48%)
Query: 91 TRPKRKKIDPSDAMQQIYDVI-RNFKKEDGALLCDPFIRIPK---KRQEPSYHEVVTNPI 146
TRPKR+ ++ +Q + V+ ++ K A PF P K P Y++++ NP+
Sbjct: 39 TRPKRQ----TNQLQYLLKVVLKSLWKHQFAW---PF-HAPVDAVKLNLPDYYKIIKNPM 90
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELLVVTN 177
D I+++L++ Y + D + TN
Sbjct: 91 DMGTIKKRLESAFYTSAQECIQDFNTMF-TN 120
Score = 46 (21.3 bits), Expect = 0.00064, Sum P(2) = 0.00063
Identities = 12/58 (20%), Positives = 26/58 (44%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELF 231
++ NP+D I+++L++ Y + D + N + K A+ L ++F
Sbjct: 85 IIKNPMDMGTIKKRLESAFYTSAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKVF 142
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 213 (80.0 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 41/103 (39%), Positives = 65/103 (63%)
Query: 277 QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
Q + + V+ D R L EVF LPS+K PEYY++I P+D + I R++ KY S
Sbjct: 1388 QMNAIVDTVINYRDISGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERVRSHKYRS 1447
Query: 337 LGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
+ D+EKD++L+ NA T+N GSQIY+D+ L+ + ++ + +I
Sbjct: 1448 VSDLEKDVMLLCHNAQTYNLEGSQIYEDSIVLQSVFKSARQKI 1490
Score = 195 (73.7 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 38/98 (38%), Positives = 61/98 (62%)
Query: 478 TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
+GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y + ++ D + + NA
Sbjct: 1403 SGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERVRSHKYRSVSDLEKDVMLLCHNA 1462
Query: 538 CKYNEPDSHIYKDALSLQRIVLQTKMHL-REDEDSVPD 574
YN S IY+D++ LQ + + + RE+ D D
Sbjct: 1463 QTYNLEGSQIYEDSIVLQSVFKSARQKIAREESDDESD 1500
Score = 148 (57.2 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 26/87 (29%), Positives = 53/87 (60%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPI 146
RP +K+ P+ M I D + N++ G L + F+++P +++ P Y+E++ P+
Sbjct: 1372 RPPAEKLSPNPPKLTKQMNAIVDTVINYRDISGRQLSEVFVQLPSRKELPEYYELIRKPV 1431
Query: 147 DFIKIQQKLKTDEYDDLSDFQADIELL 173
DF KI++++++ +Y +SD + D+ LL
Sbjct: 1432 DFKKIKERVRSHKYRSVSDLEKDVMLL 1458
Score = 49 (22.3 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 16/74 (21%), Positives = 28/74 (37%)
Query: 220 EHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCE 279
E D +E++ S K+++P S E + A + D SS +
Sbjct: 645 EEEDDEEVVSRAESEEKKVIDPNSDEVSETAAKHIIESAKQDVDDEYSSQAGQTSSQSYY 704
Query: 280 DLFNAVMTSTDADS 293
+ +AV+ D S
Sbjct: 705 GVAHAVIERVDKQS 718
Score = 45 (20.9 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T N+ + Q ++A+ +KL + +K+E E+
Sbjct: 403 MRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQER 445
Score = 37 (18.1 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 181 FIKIQQKLKTDEYDDLSD 198
F +QK+ +E DD SD
Sbjct: 1483 FKSARQKIAREESDDESD 1500
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 223 (83.6 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 50/126 (39%), Positives = 77/126 (61%)
Query: 281 LFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGD 339
+ +AV+ D+ S R L EVF LPS+K PEYY++I P+D + I RI++ KY SL D
Sbjct: 1422 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1481
Query: 340 MEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIR 399
+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+ + +SE
Sbjct: 1482 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEE 1541
Query: 400 GGQSLS 405
G +S S
Sbjct: 1542 GSESES 1547
Score = 206 (77.6 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 38/111 (34%), Positives = 71/111 (63%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1417 KKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1476
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L+++ D + + NA +N S IY+D++ LQ + + + +++DS
Sbjct: 1477 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1527
Score = 145 (56.1 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 46/200 (23%), Positives = 96/200 (48%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFK-KEDGALLCDPFIRIPKKRQEPSYHEVVTNP 145
RP +K+ P+ M++I D + +K G L + FI++P +++ P Y+E++ P
Sbjct: 1402 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKP 1461
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIEL 205
+DF KI+++++ +Y L+D + D+ +L+ N F ++ L Y+D Q+
Sbjct: 1462 VDFKKIKERIRNHKYRSLNDLEKDV-MLLCQNAQTF-NLEGSLI---YEDSIVLQSVFTS 1516
Query: 206 LVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSR 265
+ + + +E + +E E + ++ + + G +K + D + SR
Sbjct: 1517 VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEK-AQDRLKGGRRRPSR 1575
Query: 266 DSS---ICTED--EQNQCED 280
S + ++D E+ Q ED
Sbjct: 1576 GSRAKPVVSDDDSEEEQEED 1595
Score = 47 (21.6 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T NA + Q ++A+ +KL + +K+E E+
Sbjct: 416 MRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 458
Score = 43 (20.2 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 353 TFNEPGSQIY 362
TFNEPGS+ +
Sbjct: 1132 TFNEPGSEYF 1141
Score = 40 (19.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 99 DPSDAMQQIYDV-IRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+P D Q+ D+ ++ E G +L PK Q ++ E+ NP + + +
Sbjct: 596 EPLDETSQMSDLPVKVIHVESGKILTGT--DAPKAGQLEAWLEM--NPGYEVAPRSDSEE 651
Query: 158 DEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAK 211
++ + + + + P ++ ++K+ + DD+S+ D +++NAK
Sbjct: 652 SGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSE--VDARHIIENAK 703
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 223 (83.6 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 50/126 (39%), Positives = 77/126 (61%)
Query: 281 LFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGD 339
+ +AV+ D+ S R L EVF LPS+K PEYY++I P+D + I RI++ KY SL D
Sbjct: 1424 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1483
Query: 340 MEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIR 399
+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+ + +SE
Sbjct: 1484 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEE 1543
Query: 400 GGQSLS 405
G +S S
Sbjct: 1544 GSESES 1549
Score = 206 (77.6 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 38/111 (34%), Positives = 71/111 (63%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1419 KKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1478
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L+++ D + + NA +N S IY+D++ LQ + + + +++DS
Sbjct: 1479 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1529
Score = 145 (56.1 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 46/200 (23%), Positives = 96/200 (48%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFK-KEDGALLCDPFIRIPKKRQEPSYHEVVTNP 145
RP +K+ P+ M++I D + +K G L + FI++P +++ P Y+E++ P
Sbjct: 1404 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKP 1463
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIEL 205
+DF KI+++++ +Y L+D + D+ +L+ N F ++ L Y+D Q+
Sbjct: 1464 VDFKKIKERIRNHKYRSLNDLEKDV-MLLCQNAQTF-NLEGSLI---YEDSIVLQSVFTS 1518
Query: 206 LVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSR 265
+ + + +E + +E E + ++ + + G +K + D + SR
Sbjct: 1519 VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEK-AQDRLKGGRRRPSR 1577
Query: 266 DSS---ICTED--EQNQCED 280
S + ++D E+ Q ED
Sbjct: 1578 GSRAKPVVSDDDSEEEQEED 1597
Score = 47 (21.6 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T NA + Q ++A+ +KL + +K+E E+
Sbjct: 416 MRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 458
Score = 43 (20.2 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 353 TFNEPGSQIY 362
TFNEPGS+ +
Sbjct: 1133 TFNEPGSEYF 1142
Score = 40 (19.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 99 DPSDAMQQIYDV-IRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+P D Q+ D+ ++ E G +L PK Q ++ E+ NP + + +
Sbjct: 596 EPLDETSQMSDLPVKVIHVESGKILTGT--DAPKAGQLEAWLEM--NPGYEVAPRSDSEE 651
Query: 158 DEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAK 211
++ + + + + P ++ ++K+ + DD+S+ D +++NAK
Sbjct: 652 SGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSE--VDARHIIENAK 703
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 223 (83.6 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 50/126 (39%), Positives = 77/126 (61%)
Query: 281 LFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGD 339
+ +AV+ D+ S R L EVF LPS+K PEYY++I P+D + I RI++ KY SL D
Sbjct: 1432 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1491
Query: 340 MEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIR 399
+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+ + +SE
Sbjct: 1492 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEE 1551
Query: 400 GGQSLS 405
G +S S
Sbjct: 1552 GSESES 1557
Score = 206 (77.6 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 38/111 (34%), Positives = 71/111 (63%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1427 KKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1486
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L+++ D + + NA +N S IY+D++ LQ + + + +++DS
Sbjct: 1487 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1537
Score = 144 (55.7 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 27/88 (30%), Positives = 53/88 (60%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFK-KEDGALLCDPFIRIPKKRQEPSYHEVVTNP 145
RP +K+ P+ M++I D + +K G L + FI++P +++ P Y+E++ P
Sbjct: 1412 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKP 1471
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELL 173
+DF KI+++++ +Y L+D + D+ LL
Sbjct: 1472 VDFKKIKERIRNHKYRSLNDLEKDVMLL 1499
Score = 127 (49.8 bits), Expect = 0.00046, P = 0.00046
Identities = 26/96 (27%), Positives = 48/96 (50%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+DF KI+++++ +Y L+D + D+ LL +NA+TF S + D+ L +F S
Sbjct: 1467 LIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTS 1526
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSI 269
R K+ EG + + +SR +
Sbjct: 1527 VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKV 1562
Score = 47 (21.6 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T NA + Q ++A+ +KL + +K+E E+
Sbjct: 424 MRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Score = 43 (20.2 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 353 TFNEPGSQIY 362
TFNEPGS+ +
Sbjct: 1141 TFNEPGSEYF 1150
Score = 40 (19.1 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 99 DPSDAMQQIYDV-IRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+P D Q+ D+ ++ E G +L PK Q ++ E+ NP + + +
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGT--DAPKAGQLEAWLEM--NPGYEVAPRSDSEE 659
Query: 158 DEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAK 211
++ + + + + P ++ ++K+ + DD+S+ D +++NAK
Sbjct: 660 SGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSE--VDARHIIENAK 711
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 223 (83.6 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 50/126 (39%), Positives = 77/126 (61%)
Query: 281 LFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGD 339
+ +AV+ D+ S R L EVF LPS+K PEYY++I P+D + I RI++ KY SL D
Sbjct: 1432 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1491
Query: 340 MEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIR 399
+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+ + +SE
Sbjct: 1492 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEE 1551
Query: 400 GGQSLS 405
G +S S
Sbjct: 1552 GSESES 1557
Score = 206 (77.6 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 38/111 (34%), Positives = 71/111 (63%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1427 KKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1486
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L+++ D + + NA +N S IY+D++ LQ + + + +++DS
Sbjct: 1487 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1537
Score = 149 (57.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 47/200 (23%), Positives = 97/200 (48%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFK-KEDGALLCDPFIRIPKKRQEPSYHEVVTNP 145
RP +K+ P+ M++I D + +K G L + FI++P +++ P Y+E++ P
Sbjct: 1412 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKP 1471
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIEL 205
+DF KI+++++ +Y L+D + D+ +L+ N F ++ L Y+D Q+
Sbjct: 1472 VDFKKIKERIRNHKYRSLNDLEKDV-MLLCQNAQTF-NLEGSLI---YEDSIVLQSVFTS 1526
Query: 206 LVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSR 265
+ + + +E + +E E + ++ + + G +K + D + S SR
Sbjct: 1527 VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEK-AQDRLKGSRRRPSR 1585
Query: 266 DSS---ICTED--EQNQCED 280
S + ++D E+ Q ED
Sbjct: 1586 GSRAKPVVSDDDSEEEQEED 1605
Score = 47 (21.6 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T NA + Q ++A+ +KL + +K+E E+
Sbjct: 424 MRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Score = 43 (20.2 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 353 TFNEPGSQIY 362
TFNEPGS+ +
Sbjct: 1141 TFNEPGSEYF 1150
Score = 40 (19.1 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 24/116 (20%), Positives = 54/116 (46%)
Query: 99 DPSDAMQQIYDV-IRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+P D Q+ D+ ++ E G +L PK Q ++ E+ NP ++ + +
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGT--DAPKAGQLEAWLEM--NP--GYEVAPRSDS 657
Query: 158 DEY-DDLSDFQADIELLVVTNPIDF-IKIQQKLKTDEYDDLSDFQADIELLVKNAK 211
+E + + + + E P + ++ ++K+ + DD+S+ D +++NAK
Sbjct: 658 EESGSEEEEEEEEEEQPQPAQPPNLPVEEKKKIPDPDSDDVSE--VDARHIIENAK 711
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 223 (83.6 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 50/126 (39%), Positives = 77/126 (61%)
Query: 281 LFNAVMTSTDADS-RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGD 339
+ +AV+ D+ S R L EVF LPS+K PEYY++I P+D + I RI++ KY SL D
Sbjct: 1436 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1495
Query: 340 MEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIR 399
+EKD++L+ +NA TFN GS IY+D+ L+ + + + +IE+ + +SE
Sbjct: 1496 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEE 1555
Query: 400 GGQSLS 405
G +S S
Sbjct: 1556 GSESES 1561
Score = 206 (77.6 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 38/111 (34%), Positives = 71/111 (63%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 1431 KKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1490
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L+++ D + + NA +N S IY+D++ LQ + + + +++DS
Sbjct: 1491 RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1541
Score = 144 (55.7 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 27/88 (30%), Positives = 53/88 (60%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFK-KEDGALLCDPFIRIPKKRQEPSYHEVVTNP 145
RP +K+ P+ M++I D + +K G L + FI++P +++ P Y+E++ P
Sbjct: 1416 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKP 1475
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELL 173
+DF KI+++++ +Y L+D + D+ LL
Sbjct: 1476 VDFKKIKERIRNHKYRSLNDLEKDVMLL 1503
Score = 127 (49.8 bits), Expect = 0.00047, P = 0.00047
Identities = 26/96 (27%), Positives = 48/96 (50%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+DF KI+++++ +Y L+D + D+ LL +NA+TF S + D+ L +F S
Sbjct: 1471 LIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTS 1530
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSI 269
R K+ EG + + +SR +
Sbjct: 1531 VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKV 1566
Score = 47 (21.6 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M +D L T NA + Q ++A+ +KL + +K+E E+
Sbjct: 424 MRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466
Score = 43 (20.2 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 353 TFNEPGSQIY 362
TFNEPGS+ +
Sbjct: 1141 TFNEPGSEYF 1150
Score = 40 (19.1 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 99 DPSDAMQQIYDV-IRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKT 157
+P D Q+ D+ ++ E G +L PK Q ++ E+ NP + + +
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGT--DAPKAGQLEAWLEM--NPGYEVAPRSDSEE 659
Query: 158 DEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAK 211
++ + + + + P ++ ++K+ + DD+S+ D +++NAK
Sbjct: 660 SGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSE--VDARHIIENAK 711
>CGD|CAL0006080 [details] [associations]
symbol:orf19.2964 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006276 "plasmid maintenance"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0015616 "DNA
translocase activity" evidence=IEA] InterPro:IPR001025
InterPro:IPR001487 InterPro:IPR027180 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 CGD:CAL0006080 EMBL:AACQ01000017 EMBL:AACQ01000015
GO:GO:0003677 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 KO:K11756 PANTHER:PTHR16062:SF3
RefSeq:XP_721191.1 RefSeq:XP_721463.1 ProteinModelPortal:Q5AI89
STRING:Q5AI89 GeneID:3636828 GeneID:3637116 KEGG:cal:CaO19.10481
KEGG:cal:CaO19.2964 Uniprot:Q5AI89
Length = 795
Score = 141 (54.7 bits), Expect = 5.8e-13, Sum P(3) = 5.8e-13
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 279 EDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLG 338
+ LFN + D + +H FQ LP + +YY V+ P+ L + R++++ KYA
Sbjct: 14 QSLFNGIYKIED-NGYLIHPTFQTLPLRSG-TDYYKVVQNPLSLHAVGRKLKNLKYADAQ 71
Query: 339 DMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKM-EIEQGKFTPAGKS 390
+ DL L++ NA +N S IY+ A+ LK+ + + +++ K P G S
Sbjct: 72 EFINDLALISWNARFYNHSKSVIYRQAQILKQYITDVVIPKLKNDKAVPNGHS 124
Score = 118 (46.6 bits), Expect = 5.8e-13, Sum P(3) = 5.8e-13
Identities = 30/113 (26%), Positives = 58/113 (51%)
Query: 462 KMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYE 521
+++++ K+ + G L+ F++LP + DYYE I P+ + I K+R +Y
Sbjct: 232 RIKLILKGFKKLRD-NNGHPLTKHFEKLPDIKTHGDYYERIAAPISLNEIRIKVRSRKYS 290
Query: 522 HLDEMVADFIQMFDNACKY--NEPDSHIYKDALSLQR---IVLQTKMHLREDE 569
++ + D MF NA Y N+P S + D+ ++ +V+QT++ + E
Sbjct: 291 SVELFINDLDLMFANAQLYYENDPYSEEFLDSQQFKKEAHLVIQTELSKSDKE 343
Score = 118 (46.6 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 290 DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
D + PL + F+ LP K + +YY+ I PI L I +++ KY+S+ DL LM
Sbjct: 245 DNNGHPLTKHFEKLPDIKTHGDYYERIAAPISLNEIRIKVRSRKYSSVELFINDLDLMFA 304
Query: 350 NACTF--NEPGSQIYKDAKALKK 370
NA + N+P S+ + D++ KK
Sbjct: 305 NAQLYYENDPYSEEFLDSQQFKK 327
Score = 95 (38.5 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 94 KRKKIDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQ 153
+R+K S +Q +++ I +K ED L P + R Y++VV NP+ + +
Sbjct: 3 EREKKKLSTKLQSLFNGI--YKIEDNGYLIHPTFQTLPLRSGTDYYKVVQNPLSLHAVGR 60
Query: 154 KLKTDEYDDLSDFQADIELL 173
KLK +Y D +F D+ L+
Sbjct: 61 KLKNLKYADAQEFINDLALI 80
Score = 79 (32.9 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 24/94 (25%), Positives = 44/94 (46%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
VV NP+ + +KLK +Y D +F D+ L+ NA+ + S +R AQ L + +
Sbjct: 48 VVQNPLSLHAVGRKLKNLKYADAQEFINDLALISWNARFYNHSKSVIYRQAQILKQ--YI 105
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDS 267
T + ++ + S+ + + D RD+
Sbjct: 106 TDVVIPKLKNDKAVPNGHSLIYPHIGDLPDDRDN 139
Score = 62 (26.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 608 NKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYK 651
+KP + R+ + K RD +G F +LP K + +YY+
Sbjct: 226 DKPFETRIKLILKGFKKLRDNNGHPLTKHFEKLPDIKTHGDYYE 269
Score = 41 (19.5 bits), Expect = 5.8e-13, Sum P(3) = 5.8e-13
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 607 DNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFME 639
+N + R+ T CL D +D QP++ E
Sbjct: 480 ENTHVFNRIRTWKACLPDEVREDPEQPLIPLKE 512
>POMBASE|SPBC4B4.03 [details] [associations]
symbol:rsc1 "RSC complex subunit Rsc1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEP]
[GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0016586 "RSC
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEP]
[GO:1900388 "regulation of vesicle-mediated transport by regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 PomBase:SPBC4B4.03 GO:GO:0003677 EMBL:CU329671
GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0016586 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
PIR:T40475 RefSeq:NP_596420.1 ProteinModelPortal:O74964
DIP:DIP-48389N STRING:O74964 EnsemblFungi:SPBC4B4.03.1
GeneID:2540749 KEGG:spo:SPBC4B4.03 KO:K11756 OMA:PANIRNE
OrthoDB:EOG4D5673 NextBio:20801870 GO:GO:1900388 Uniprot:O74964
Length = 803
Score = 184 (69.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 33/74 (44%), Positives = 51/74 (68%)
Query: 478 TGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
+GRQL F+RLP +P+YY+ I +P+ +E+I KL ++YE +++ V DF MFDNA
Sbjct: 229 SGRQLFAPFERLPDPRMFPEYYQAIEQPMALEVIQKKLSKHRYETIEQFVDDFNLMFDNA 288
Query: 538 CKYNEPDSHIYKDA 551
+N+P S +Y+DA
Sbjct: 289 KSFNDPSSQVYRDA 302
Score = 164 (62.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 33/94 (35%), Positives = 51/94 (54%)
Query: 290 DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
D R L F+ LP + +PEYY I+ P+ L I +++ +Y ++ D LM
Sbjct: 227 DGSGRQLFAPFERLPDPRMFPEYYQAIEQPMALEVIQKKLSKHRYETIEQFVDDFNLMFD 286
Query: 350 NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGK 383
NA +FN+P SQ+Y+DA LK + + +E GK
Sbjct: 287 NAKSFNDPSSQVYRDADFLKNYL-ADVLRLEAGK 319
Score = 68 (29.0 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 178 PIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELME 229
P IQ K+ +Y D S+F +D+ L N K Y+ +Q + Q L E
Sbjct: 58 PTTLKSIQSKIDEFQYHDFSEFVSDLAYLFINVKALYE-GTQTYSFVQALEE 108
Score = 50 (22.7 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 145 PIDFIKIQQKLKTDEYDDLSDFQADIELLVV 175
P IQ K+ +Y D S+F +D+ L +
Sbjct: 58 PTTLKSIQSKIDEFQYHDFSEFVSDLAYLFI 88
>UNIPROTKB|C9JJU3 [details] [associations]
symbol:BRDT "Bromodomain testis-specific protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0006338 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 HOGENOM:HOG000231200 EMBL:AC114486
HGNC:HGNC:1105 ChiTaRS:BRDT IPI:IPI00645771
ProteinModelPortal:C9JJU3 SMR:C9JJU3 STRING:C9JJU3
Ensembl:ENST00000426141 ArrayExpress:C9JJU3 Bgee:C9JJU3
Uniprot:C9JJU3
Length = 462
Score = 141 (54.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K + P+YY +I P+DL TI +R+++ YA + +D M N +N+PG I A
Sbjct: 60 KLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 366 KALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAA 410
+AL+KL K ++ Q + G ERI+ +G Q A+++A
Sbjct: 120 QALEKLFMQKLSQMPQEEQV-VGVKERIK----KGTQQNIAVSSA 159
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I+ P+D+ I +L Y E + DF MF N YN+P I A +L+
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 556 RIVLQTKMHLREDEDSV 572
++ +Q + ++E V
Sbjct: 124 KLFMQKLSQMPQEEQVV 140
Score = 105 (42.0 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+YY+V++ P+D+ I K+ +Y+ + AD MF N KYN PD + A LQ
Sbjct: 308 NYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQD 367
Query: 557 I 557
+
Sbjct: 368 V 368
Score = 63 (27.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/108 (21%), Positives = 43/108 (39%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ NP+D I+++L+ Y S+ D + N + K AQ L +LF
Sbjct: 69 IIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQ 128
Query: 234 TRNKLLNPQSHEGTSQ--KRSMDFMMASETEDSRDSSICTEDEQNQCE 279
+++ + G + K+ +A + + S TE Q E
Sbjct: 129 KLSQMPQEEQVVGVKERIKKGTQQNIAVSSAKEKSSPSATEKVFKQQE 176
Score = 61 (26.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 132 KRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
K Q P Y+ ++ NP+D I+++L+ Y S+ D +
Sbjct: 60 KLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTM 101
>RGD|1306678 [details] [associations]
symbol:Brdt "bromodomain, testis-specific" species:10116 "Rattus
norvegicus" [GO:0001207 "histone displacement" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007141
"male meiosis I" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=ISS] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0051039 "positive regulation of transcription
during meiosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine
binding" evidence=ISS] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 RGD:1306678
GO:GO:0005634 GO:GO:0030154 GO:GO:0008380 GO:GO:0006397
GO:GO:0007283 GO:GO:0006351 GO:GO:0006338 GO:GO:0043484
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0051039 PROSITE:PS51525 GO:GO:0007141
OMA:GVMKSSD OrthoDB:EOG4NVZJT GO:GO:0001207 IPI:IPI00363686
Ensembl:ENSRNOT00000002842 ArrayExpress:D4A7T3 Uniprot:D4A7T3
Length = 952
Score = 140 (54.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 35/106 (33%), Positives = 59/106 (55%)
Query: 305 SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKD 364
+K + P+YY +I+ P+DL TI +R+++ Y + D M N +N+PG I
Sbjct: 58 AKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVM 117
Query: 365 AKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAA 410
A+AL+KL K ++ Q + GK ER++ K I Q +A+++A
Sbjct: 118 AQALEKLFMQKLSQMPQEEQIVGGK-ERMK-KDI---QQKTAVSSA 158
Score = 135 (52.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I P+D+ I +L YE E V DF MF N YN+P I A +L+
Sbjct: 63 PDYYTIIETPMDLSTIKKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALE 122
Query: 556 RIVLQTKMHLREDEDSV 572
++ +Q + ++E V
Sbjct: 123 KLFMQKLSQMPQEEQIV 139
Score = 114 (45.2 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+YY++++ P+D+ I K+ +Y+ E AD MF N KYN PD + A LQ
Sbjct: 307 NYYDIVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQD 366
Query: 557 IVLQTKMHLREDEDSVPDVP 576
+ +MH + +PD P
Sbjct: 367 VF---EMHFAK----IPDEP 379
Score = 65 (27.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/95 (16%), Positives = 39/95 (41%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+++L+ Y+ S+ D + N + K AQ L +LF
Sbjct: 68 IIETPMDLSTIKKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFMQ 127
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSS 268
+++ + G ++ D + +++ +
Sbjct: 128 KLSQMPQEEQIVGGKERMKKDIQQKTAVSSAKEQT 162
Score = 57 (25.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 132 KRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
K + P Y+ ++ P+D I+++L+ Y+ S+ D +
Sbjct: 59 KLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGDFNTM 100
>UNIPROTKB|H9L005 [details] [associations]
symbol:LOC100859056 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000114 "regulation of transcription involved
in G1 phase of mitotic cell cycle" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043983 "histone
H4-K12 acetylation" evidence=IEA] [GO:0044154 "histone H3-K14
acetylation" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00700000104261 EMBL:AADN02044714 EMBL:AADN02044715
EMBL:AADN02044716 EMBL:AADN02044717 EMBL:AADN02044718
EMBL:AADN02078896 Ensembl:ENSGALT00000021705 Uniprot:H9L005
Length = 578
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY++I+ P+DM I +L N Y + E + DF MF N YN+P I A +L+
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 556 RIVLQTKMHLREDEDSV 572
++ LQ + ++E +
Sbjct: 155 KLFLQKISEMTQEETEI 171
Score = 128 (50.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY ++I+ P+D+ I SKL +Y E AD MF N KYN D + A LQ
Sbjct: 386 DYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQD 445
Query: 557 IVLQTKMHLREDEDSVPDVPAA 578
V + + DE P +PA+
Sbjct: 446 -VFEMRFAKMPDEPEEPVIPAS 466
Score = 121 (47.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+YY +I P+D+ TI +R+++ Y + + +D M N +N+PG I A
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 366 KALKKLVQTKKMEIEQ 381
+AL+KL K E+ Q
Sbjct: 151 EALEKLFLQKISEMTQ 166
Score = 54 (24.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/83 (20%), Positives = 40/83 (48%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEY----DDLSDFQADIELLVVTN-P-IDFIKIQQKLK 189
P Y++++ P+D I+++L+ + Y + + DF + N P D + + + L+
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 190 TDEYDDLSDF-QADIELLVKNAK 211
+S+ Q + E+++ K
Sbjct: 155 KLFLQKISEMTQEETEIVIAQTK 177
Score = 44 (20.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/58 (20%), Positives = 26/58 (44%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELF 231
++ P+D I+++L+ + Y + + D + N + K A+ L +LF
Sbjct: 100 IIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>POMBASE|SPCC1450.02 [details] [associations]
symbol:bdf1 "Swr1 complex bromodomain subunit Brf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IPI] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 PomBase:SPCC1450.02 GO:GO:0006355
EMBL:CU329672 GO:GO:0006351 GO:GO:0016568 GO:GO:0000812
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 PIR:T40984 RefSeq:NP_588301.2
ProteinModelPortal:Q9Y7N0 STRING:Q9Y7N0 EnsemblFungi:SPCC1450.02.1
GeneID:2538955 KEGG:spo:SPCC1450.02 KO:K11684 OMA:MDQLEDR
OrthoDB:EOG44TSHM NextBio:20800130 PROSITE:PS51525 Uniprot:Q9Y7N0
Length = 578
Score = 158 (60.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 75/307 (24%), Positives = 131/307 (42%)
Query: 90 QTRPKRKKIDPSDAM--QQIY--DVIRNFKKEDGALLCDPF-IRI-PKKRQEPSYHEVVT 143
+ P KKI S QQ Y ++R K+ + PF + + P K+ P Y +V
Sbjct: 72 EPEPTVKKIRGSGMPPPQQKYCLAIVRQLKRTKNSA---PFKVPVDPIKQNIPDYPTIVK 128
Query: 144 NPIDFIKIQQKLKTDEYDDLSDFQADIELLV--------VTNPIDFI-KIQQKLKTDEYD 194
NP+D I++KL + EY +F D+ L+ +P+ + K Q++ +
Sbjct: 129 NPMDLGTIEKKLTSYEYSVPQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLK 188
Query: 195 DLSDFQADIELLVKNAK-----TFYKRNSQEHRDAQELMELFHSTRNKLLNPQS-HEGTS 248
L D + VK +K T R + + + ST K +P EG
Sbjct: 189 QLPDAEQPAAAPVKKSKQKSASTAPPRTRRNSSVSSTSASVAASTAPKAASPAVLPEGKP 248
Query: 249 QKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKR 308
++R + M S++ E + Q E + P ++ P
Sbjct: 249 RRRKNNSQMRF------CSTVLKELYKRQYESF-----------AFPFYQPVD--PVACD 289
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
P+Y+DVI P+DL TI ++ +Y++L + E D++LM N T+N PG+ ++ + L
Sbjct: 290 CPDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQL 349
Query: 369 KKLVQTK 375
+ + + K
Sbjct: 350 ENVFKEK 356
Score = 142 (55.0 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 43/146 (29%), Positives = 71/146 (48%)
Query: 462 KMRILYNTIKETCEPKTGRQLSHIFQRL-PSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+MR +KE + + +Q + P D PDY++VI++P+D+ I SKL N+Y
Sbjct: 256 QMRFCSTVLKELYKRQYESFAFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEY 315
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQ 580
L+E +D + MF+N YN P + ++ L+ V + K R D V Q
Sbjct: 316 STLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLEN-VFKEKWEARPKFDDATLVKQ--Q 372
Query: 581 ELLT-SLFTSVYNHQKQCLGSFHVLN 605
E T +LF + +++ L S +N
Sbjct: 373 EAETDALFDN--GEEEEALMSEEEIN 396
Score = 103 (41.3 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 31/115 (26%), Positives = 59/115 (51%)
Query: 304 PSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYK 363
P K+ P+Y ++ P+DL TI +++ +Y+ + D+ LM N +N S +
Sbjct: 115 PIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQEFIDDMNLMFSNCFLYNGTESPVGS 174
Query: 364 DAKALKKLV--QTKKM-EIEQGKFTPAGKSERIRSK----RIRGGQSLSAITAAL 411
KAL+++ Q K++ + EQ P KS++ + R R S+S+ +A++
Sbjct: 175 MGKALQEVFERQLKQLPDAEQPAAAPVKKSKQKSASTAPPRTRRNSSVSSTSASV 229
Score = 40 (19.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/64 (20%), Positives = 30/64 (46%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
+ N + E C + QLS++ + L R + P + +D+ + ++ + Y ++ +
Sbjct: 444 MQNELAERCNYLSAEQLSNVAEIL--REEMPWLRDTDEIEIDVGNMKPEVFHRIYRYVCK 501
Query: 526 MVAD 529
AD
Sbjct: 502 PDAD 505
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 202 (76.2 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 40/97 (41%), Positives = 63/97 (64%)
Query: 275 QNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKY 334
+ Q + +AV+ D R L E F LPS++R P+YY++I P+D++ I +RI+D KY
Sbjct: 1427 KKQMHKIMSAVIKHNQ-DGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKY 1485
Query: 335 ASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL 371
A L ++EKD + + +NA +NE S IY D+ AL+K+
Sbjct: 1486 ADLNELEKDFMQLCQNAQIYNEEASLIYLDSIALQKV 1522
Score = 194 (73.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 41/111 (36%), Positives = 66/111 (59%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
Q +I+ IK + GR LS F +LPSR PDYYE+I++PVD++ I ++ +Y
Sbjct: 1429 QMHKIMSAVIKHN---QDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKY 1485
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
L+E+ DF+Q+ NA YNE S IY D+++LQ++ + + + D+
Sbjct: 1486 ADLNELEKDFMQLCQNAQIYNEEASLIYLDSIALQKVFVGARQRITAAADA 1536
Score = 128 (50.1 bits), Expect = 0.00037, P = 0.00037
Identities = 23/80 (28%), Positives = 51/80 (63%)
Query: 92 RPKRKKIDPSDAMQQIYDVIRNFKK--EDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFI 149
R +R+ +D + +Q++ ++ K +DG L +PF+++P +++ P Y+E++ P+D
Sbjct: 1416 RRRRQNLDKR-SKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIK 1474
Query: 150 KIQQKLKTDEYDDLSDFQAD 169
KI Q+++ +Y DL++ + D
Sbjct: 1475 KILQRIEDCKYADLNELEKD 1494
Score = 42 (19.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 342 KDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
+D L T N + Q ++A+A +KL + +K+E E+
Sbjct: 467 RDTTLETALNIKLYKRTKRQGLREARATEKLEKQQKLEAER 507
Score = 37 (18.1 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 9/39 (23%), Positives = 19/39 (48%)
Query: 360 QIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRI 398
Q+ K + K+L+Q KK + G++ + + R+
Sbjct: 616 QMKKKEEEGKRLIQFKKELLMSGEYIGIDEGSIVADMRV 654
>UNIPROTKB|H9L2H3 [details] [associations]
symbol:LOC100859056 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000114 "regulation of transcription involved
in G1 phase of mitotic cell cycle" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043983 "histone
H4-K12 acetylation" evidence=IEA] [GO:0044154 "histone H3-K14
acetylation" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00700000104261 EMBL:AADN02044714 EMBL:AADN02044715
EMBL:AADN02044716 EMBL:AADN02044717 EMBL:AADN02044718
EMBL:AADN02078896 Ensembl:ENSGALT00000035893 OMA:SCEDEDV
Uniprot:H9L2H3
Length = 859
Score = 137 (53.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY++I+ P+DM I +L N Y + E + DF MF N YN+P I A +L+
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 556 RIVLQTKMHLREDEDSV 572
++ LQ + ++E +
Sbjct: 155 KLFLQKISEMTQEETEI 171
Score = 128 (50.1 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY ++I+ P+D+ I SKL +Y E AD MF N KYN D + A LQ
Sbjct: 386 DYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQD 445
Query: 557 IVLQTKMHLREDEDSVPDVPAA 578
V + + DE P +PA+
Sbjct: 446 -VFEMRFAKMPDEPEEPVIPAS 466
Score = 121 (47.7 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+YY +I P+D+ TI +R+++ Y + + +D M N +N+PG I A
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 366 KALKKLVQTKKMEIEQ 381
+AL+KL K E+ Q
Sbjct: 151 EALEKLFLQKISEMTQ 166
Score = 54 (24.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 17/83 (20%), Positives = 40/83 (48%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEY----DDLSDFQADIELLVVTN-P-IDFIKIQQKLK 189
P Y++++ P+D I+++L+ + Y + + DF + N P D + + + L+
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 190 TDEYDDLSDF-QADIELLVKNAK 211
+S+ Q + E+++ K
Sbjct: 155 KLFLQKISEMTQEETEIVIAQTK 177
Score = 44 (20.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 12/58 (20%), Positives = 26/58 (44%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELF 231
++ P+D I+++L+ + Y + + D + N + K A+ L +LF
Sbjct: 100 IIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 209 (78.6 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 43/104 (41%), Positives = 65/104 (62%)
Query: 278 CEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASL 337
C +++ AV D + RPL+++F LPSKK YP+YY +I PI L I + I Y +L
Sbjct: 1070 CLEIYKAVNELEDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTL 1129
Query: 338 GDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
M+ DL+ M NA T+NE GS +Y+DA ++ ++TK E+E+
Sbjct: 1130 EAMKSDLMTMFNNARTYNEEGSFVYEDANKMQTAMETKIEELEE 1173
Score = 188 (71.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 40/127 (31%), Positives = 69/127 (54%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
+Y + E E GR L+ +F LPS+ YPDYY +I+ P+ ++ I + Y+ L+
Sbjct: 1073 IYKAVNEL-EDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEA 1131
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQELLTS 585
M +D + MF+NA YNE S +Y+DA +Q ++TK+ E++ ++ + E +
Sbjct: 1132 MKSDLMTMFNNARTYNEEGSFVYEDANKMQT-AMETKIEELEEDGTLATLRGMEAEATSQ 1190
Query: 586 LFTSVYN 592
L + N
Sbjct: 1191 LEDRIEN 1197
Score = 38 (18.4 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 17/81 (20%), Positives = 37/81 (45%)
Query: 197 SDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFM 256
+ ++ DI+ V A F +++ E R+A L L + + N + +G ++ +
Sbjct: 874 AQYKLDIDGKVIQAGKFDNKSTPEEREAF-LRSLLENENGEEENDE--KGELDDDELNEI 930
Query: 257 MASETEDSRDSSICTEDEQNQ 277
+A ++ R TED + +
Sbjct: 931 LARGDDELRLFKQMTEDLERE 951
>RGD|1307282 [details] [associations]
symbol:Brd4 "bromodomain containing 4" species:10116 "Rattus
norvegicus" [GO:0000114 "regulation of transcription involved in G1
phase of mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006468
"protein phosphorylation" evidence=ISO] [GO:0007059 "chromosome
segregation" evidence=ISO] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=ISO] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=ISO] [GO:0043388 "positive
regulation of DNA binding" evidence=ISO] [GO:0043983 "histone
H4-K12 acetylation" evidence=ISO] [GO:0044154 "histone H3-K14
acetylation" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 RGD:1307282 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
HOGENOM:HOG000231200 HOVERGEN:HBG004896 EMBL:BC100641
IPI:IPI00769116 UniGene:Rn.12110 STRING:Q497A6 UCSC:RGD:1307282
Genevestigator:Q497A6 Uniprot:Q497A6
Length = 566
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY++I+ P+DM I +L N Y + E + DF MF N YN+P I A +L+
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 556 RIVLQTKMHLREDEDSVPDVPA 577
++ LQ L +E + V A
Sbjct: 155 KLFLQKINELPTEETEIMIVQA 176
Score = 125 (49.1 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 30/79 (37%), Positives = 38/79 (48%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY ++I+ P+DM I SKL +Y E AD MF N KYN PD + A LQ
Sbjct: 390 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 449
Query: 557 IVLQTKMHLREDEDSVPDV 575
V + + DE P V
Sbjct: 450 -VFEMRFAKMPDEPEEPVV 467
Score = 117 (46.2 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+YY +I P+D+ TI +R+++ Y + + +D M N +N+PG I A
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 366 KALKKLVQTKKMEI 379
+AL+KL K E+
Sbjct: 151 EALEKLFLQKINEL 164
Score = 54 (24.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/117 (21%), Positives = 53/117 (45%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEY----DDLSDFQADIELLVVTN-PIDFIKIQ----Q 186
P Y++++ P+D I+++L+ + Y + + DF + N P D I + +
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 187 KLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQS 243
KL + ++L + E+++ AK R +E A+ + +T +PQ+
Sbjct: 155 KLFLQKINELPT--EETEIMIVQAKG-RGRGRKETGTAKPGVSTVPNTTQASTSPQT 208
>MGI|MGI:1891374 [details] [associations]
symbol:Brdt "bromodomain, testis-specific" species:10090
"Mus musculus" [GO:0001207 "histone displacement" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0042393 "histone binding" evidence=ISO;IDA] [GO:0043484
"regulation of RNA splicing" evidence=IMP] [GO:0051039 "positive
regulation of transcription during meiosis" evidence=IMP]
[GO:0070577 "histone acetyl-lysine binding" evidence=IMP]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 MGI:MGI:1891374 GO:GO:0005634 GO:GO:0030154
GO:GO:0008380 EMBL:CH466529 GO:GO:0006397 GO:GO:0007283
GO:GO:0006351 GO:GO:0006338 GO:GO:0043484 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0051039 PROSITE:PS51525 GO:GO:0007141
GeneTree:ENSGT00700000104261 HOGENOM:HOG000231200
HOVERGEN:HBG004896 CTD:676 KO:K11724 OMA:GVMKSSD OrthoDB:EOG4NVZJT
ChiTaRS:BRDT GO:GO:0001207 EMBL:AF358660 EMBL:AB208640
EMBL:AC126598 IPI:IPI00129480 IPI:IPI00760098 RefSeq:NP_001073342.1
RefSeq:NP_473395.2 UniGene:Mm.182836 PDB:2WP1 PDB:2WP2 PDBsum:2WP1
PDBsum:2WP2 ProteinModelPortal:Q91Y44 SMR:Q91Y44 DIP:DIP-48975N
IntAct:Q91Y44 PhosphoSite:Q91Y44 PRIDE:Q91Y44
Ensembl:ENSMUST00000031215 Ensembl:ENSMUST00000112677 GeneID:114642
KEGG:mmu:114642 UCSC:uc008ymb.1 UCSC:uc008ymc.1 InParanoid:Q91Y44
EvolutionaryTrace:Q91Y44 NextBio:368594 Bgee:Q91Y44 CleanEx:MM_BRDT
Genevestigator:Q91Y44 GermOnline:ENSMUSG00000029279 Uniprot:Q91Y44
Length = 956
Score = 133 (51.9 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 30/89 (33%), Positives = 48/89 (53%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K + P+YY +I P+DL TI +R+++ Y + +D M N +N+ G I A
Sbjct: 59 KLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMA 118
Query: 366 KALKKLVQTKKMEIEQGKFTPAGKSERIR 394
+AL+KL K ++ Q + GK ERI+
Sbjct: 119 QALEKLFMQKLSQMPQEEQVVGGK-ERIK 146
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I+ P+D+ I +L YE E + DF MF N YN+ I A +L+
Sbjct: 63 PDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALE 122
Query: 556 RIVLQTKMHLREDEDSV 572
++ +Q + ++E V
Sbjct: 123 KLFMQKLSQMPQEEQVV 139
Score = 114 (45.2 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+YY+V++ P+D+ I K+ +Y+ E AD MF N KYN PD + A +LQ
Sbjct: 307 NYYDVVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQD 366
Query: 557 IVLQTKMHLREDEDSVPDVP 576
+ ++H + +PD P
Sbjct: 367 VF---ELHFAK----IPDEP 379
Score = 58 (25.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 16/93 (17%), Positives = 37/93 (39%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+++L+ Y+ S+ D + N + K AQ L +LF
Sbjct: 68 IIKTPMDLNTIKKRLENKYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQ 127
Query: 234 TRNKLLNPQSHEGTSQKRSMDFMMASETEDSRD 266
+++ + G ++ D +++
Sbjct: 128 KLSQMPQEEQVVGGKERIKKDIQQKIAVSSAKE 160
>UNIPROTKB|Q58F21 [details] [associations]
symbol:BRDT "Bromodomain testis-specific protein"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001207 "histone
displacement" evidence=ISS] [GO:0007140 "male meiosis"
evidence=ISS] [GO:0007141 "male meiosis I" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0043484 "regulation
of RNA splicing" evidence=ISS] [GO:0051039 "positive regulation of
transcription during meiosis" evidence=ISS] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0042393 "histone binding" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0003713
"transcription coactivator activity" evidence=TAS]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 GO:GO:0030154 GO:GO:0008380
GO:GO:0006397 GO:GO:0007283 GO:GO:0006351 EMBL:CH471097
GO:GO:0006338 GO:GO:0003713 GO:GO:0043484 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0051039 PROSITE:PS51525 GO:GO:0007141
EMBL:AF019085 EMBL:AY338951 EMBL:AK303008 EMBL:AK302758
EMBL:AK316442 EMBL:AC114486 EMBL:BC005281 EMBL:BC017582
EMBL:BC047900 EMBL:BC062700 IPI:IPI00479548 IPI:IPI00759691
RefSeq:NP_001229734.1 RefSeq:NP_001229735.1 RefSeq:NP_001229736.1
RefSeq:NP_001229737.1 RefSeq:NP_001229739.1 RefSeq:NP_001717.2
RefSeq:NP_997072.1 UniGene:Hs.482520 PDB:2RFJ PDB:4FLP PDBsum:2RFJ
PDBsum:4FLP ProteinModelPortal:Q58F21 SMR:Q58F21 IntAct:Q58F21
STRING:Q58F21 PhosphoSite:Q58F21 DMDM:226694198 PRIDE:Q58F21
DNASU:676 Ensembl:ENST00000362005 Ensembl:ENST00000370389
Ensembl:ENST00000399546 Ensembl:ENST00000402388 GeneID:676
KEGG:hsa:676 UCSC:uc001dok.4 CTD:676 GeneCards:GC01P092414
HGNC:HGNC:1105 HPA:CAB012237 HPA:HPA015283 MIM:602144
neXtProt:NX_Q58F21 PharmGKB:PA25418 InParanoid:Q58F21 KO:K11724
OMA:GVMKSSD OrthoDB:EOG4NVZJT ChEMBL:CHEMBL1795185 ChiTaRS:BRDT
EvolutionaryTrace:Q58F21 GenomeRNAi:676 NextBio:2784
ArrayExpress:Q58F21 Bgee:Q58F21 CleanEx:HS_BRDT
Genevestigator:Q58F21 GermOnline:ENSG00000137948 GO:GO:0001207
Uniprot:Q58F21
Length = 947
Score = 141 (54.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K + P+YY +I P+DL TI +R+++ YA + +D M N +N+PG I A
Sbjct: 60 KLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 366 KALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAA 410
+AL+KL K ++ Q + G ERI+ +G Q A+++A
Sbjct: 120 QALEKLFMQKLSQMPQEEQV-VGVKERIK----KGTQQNIAVSSA 159
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I+ P+D+ I +L Y E + DF MF N YN+P I A +L+
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 556 RIVLQTKMHLREDEDSV 572
++ +Q + ++E V
Sbjct: 124 KLFMQKLSQMPQEEQVV 140
Score = 105 (42.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+YY+V++ P+D+ I K+ +Y+ + AD MF N KYN PD + A LQ
Sbjct: 308 NYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQD 367
Query: 557 I 557
+
Sbjct: 368 V 368
>UNIPROTKB|E1BCG9 [details] [associations]
symbol:Bt.104862 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042393 "histone binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0006338 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104261 OMA:GVMKSSD
EMBL:DAAA02007909 IPI:IPI00905420 Ensembl:ENSBTAT00000004850
Uniprot:E1BCG9
Length = 629
Score = 132 (51.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I+ P+D+ I +L + Y E + DF MF N YN+P I A +L+
Sbjct: 66 PDYYTIIKNPMDLNTIKKRLEHKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 125
Query: 556 RIVLQTKMHLREDEDSV------PDVPAAVQELLTS-LFTSVY 591
++ Q + ++E V P A+ +LLT + SV+
Sbjct: 126 KLFRQKLSQMPQEEQVVGVSIKGKQSPKALGKLLTQQVIPSVF 168
Score = 128 (50.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 32/102 (31%), Positives = 52/102 (50%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K + P+YY +I P+DL TI +R++ Y + +D M N +N+PG I A
Sbjct: 62 KLKLPDYYTIIKNPMDLNTIKKRLEHKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMA 121
Query: 366 KALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAI 407
+AL+KL + K ++ Q E++ I+G QS A+
Sbjct: 122 QALEKLFRQKLSQMPQ--------EEQVVGVSIKGKQSPKAL 155
Score = 114 (45.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+YY++++ P+D+ I +K+ +Y+ E AD MF N KYN PD + A LQ
Sbjct: 312 NYYDIVKTPMDLGTIKAKMDNQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQD 371
Query: 557 IVLQTKMHLREDEDSVPDVP 576
+ +MH + +PD P
Sbjct: 372 VF---EMHFAK----IPDEP 384
Score = 60 (26.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/77 (23%), Positives = 33/77 (42%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ NP+D I+++L+ Y S+ D + N + K AQ L +LF
Sbjct: 71 IIKNPMDLNTIKKRLEHKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFRQ 130
Query: 234 TRNKLLNPQSHEGTSQK 250
+++ + G S K
Sbjct: 131 KLSQMPQEEQVVGVSIK 147
Score = 54 (24.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 132 KRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL 173
K + P Y+ ++ NP+D I+++L+ Y S+ D +
Sbjct: 62 KLKLPDYYTIIKNPMDLNTIKKRLEHKYYVKASECIEDFNTM 103
>UNIPROTKB|H0YGM3 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC011442
EMBL:AC011485 EMBL:AC006127 HGNC:HGNC:11100 ChiTaRS:SMARCA4
PRIDE:H0YGM3 Ensembl:ENST00000538456 Bgee:H0YGM3 Uniprot:H0YGM3
Length = 427
Score = 189 (71.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 54/170 (31%), Positives = 86/170 (50%)
Query: 199 FQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQ--SHEGTSQKRSMDFM 256
FQ ++ + +KT + +E + S+R + + S T+ RS D
Sbjct: 257 FQRGLQFCTRASKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKD 316
Query: 257 MASETEDSRDSSICTEDEQN------QCEDLFNAVMTSTDADS-RPLHEVFQLLPSKKRY 309
S+ + R + N + + + +AV+ D+ S R L EVF LPS+K
Sbjct: 317 DESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKEL 376
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGS 359
PEYY++I P+D + I RI++ KY SL D+EKD++L+ +NA TFN GS
Sbjct: 377 PEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGS 426
Score = 164 (62.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 30/81 (37%), Positives = 54/81 (66%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+KM+ + + + + + +GRQLS +F +LPSR + P+YYE+IRKPVD + I ++R ++Y
Sbjct: 342 KKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 401
Query: 521 EHLDEMVADFIQMFDNACKYN 541
L+++ D + + NA +N
Sbjct: 402 RSLNDLEKDVMLLCQNAQTFN 422
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/88 (30%), Positives = 53/88 (60%)
Query: 92 RPKRKKIDPSDA-----MQQIYDVIRNFK-KEDGALLCDPFIRIPKKRQEPSYHEVVTNP 145
RP +K+ P+ M++I D + +K G L + FI++P +++ P Y+E++ P
Sbjct: 327 RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKP 386
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELL 173
+DF KI+++++ +Y L+D + D+ LL
Sbjct: 387 VDFKKIKERIRNHKYRSLNDLEKDVMLL 414
Score = 43 (20.2 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 353 TFNEPGSQIY 362
TFNEPGS+ +
Sbjct: 21 TFNEPGSEYF 30
>UNIPROTKB|Q4R8Y1 [details] [associations]
symbol:BRDT "Bromodomain testis-specific protein"
species:9541 "Macaca fascicularis" [GO:0001207 "histone
displacement" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0007140 "male
meiosis" evidence=ISS] [GO:0007141 "male meiosis I" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0051039 "positive regulation of transcription
during meiosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine
binding" evidence=ISS] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0030154 GO:GO:0008380 GO:GO:0006397 GO:GO:0007283
GO:GO:0006351 GO:GO:0006338 GO:GO:0043484 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577 InterPro:IPR018359
GO:GO:0051039 PROSITE:PS51525 GO:GO:0007141 HOVERGEN:HBG004896
GO:GO:0001207 EMBL:AB168316 EMBL:CM001276 ProteinModelPortal:Q4R8Y1
SMR:Q4R8Y1 PRIDE:Q4R8Y1 Uniprot:Q4R8Y1
Length = 947
Score = 138 (53.6 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 35/105 (33%), Positives = 56/105 (53%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K + P+YY +I P+DL TI +R+++ Y + +D M N +N+PG I A
Sbjct: 60 KLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 366 KALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAA 410
+AL+KL K ++ Q + GK ERI+ +G Q A+ +A
Sbjct: 120 QALEKLFVQKLSQMPQEEQVVGGK-ERIK----KGTQQNIAVFSA 159
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I+ P+D+ I +L Y E + DF MF N YN+P I A +L+
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 556 RIVLQTKMHLREDEDSV 572
++ +Q + ++E V
Sbjct: 124 KLFVQKLSQMPQEEQVV 140
Score = 104 (41.7 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+YY++++ P+D+ I K+ +Y+ + AD MF N KYN PD + A LQ
Sbjct: 308 NYYDIVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQD 367
Query: 557 I 557
+
Sbjct: 368 V 368
>ZFIN|ZDB-GENE-990415-248 [details] [associations]
symbol:brd2a "bromodomain-containing 2a"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 ZFIN:ZDB-GENE-990415-248 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
HOGENOM:HOG000231200 HOVERGEN:HBG004896 OrthoDB:EOG4NZTT4
EMBL:EU126946 IPI:IPI00608482 UniGene:Dr.75177
ProteinModelPortal:A8CYQ7 SMR:A8CYQ7 STRING:A8CYQ7 NextBio:20806843
ArrayExpress:A8CYQ7 Bgee:A8CYQ7 Uniprot:A8CYQ7
Length = 838
Score = 149 (57.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 33/86 (38%), Positives = 45/86 (52%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I++P+DM I +L N Y E + DF MF N YN+P I A SL+
Sbjct: 109 PDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLE 168
Query: 556 RIVLQTKMHLREDEDSVP-DVPAAVQ 580
+ LQ + E E+ +P VP Q
Sbjct: 169 KAFLQKVAQMPEVEEEIPAPVPRGKQ 194
Score = 126 (49.4 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 36/121 (29%), Positives = 62/121 (51%)
Query: 295 PLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTF 354
P HE +K P+YY++I P+D+ TI +R+++ Y S + +D M N +
Sbjct: 96 PFHEPVDA--AKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIY 153
Query: 355 NEPGSQIYKDAKALKK--LVQTKKM-EIEQGKFTPAGKSERIRSKRIRGGQSL--SAITA 409
N+P I A++L+K L + +M E+E+ P + ++ + K+ GQ L IT
Sbjct: 154 NKPTDDIVLMAQSLEKAFLQKVAQMPEVEEEIPAPVPRGKQSKPKK---GQKLFSGGITT 210
Query: 410 A 410
A
Sbjct: 211 A 211
Score = 115 (45.5 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 29/85 (34%), Positives = 44/85 (51%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DYY++I P+D+ I K+ + +Y + AD MF N KYN PD + A LQ
Sbjct: 421 DYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQD 480
Query: 557 IVLQTKMHLREDE--DSVPDVPAAV 579
V + + DE +S+P PA++
Sbjct: 481 -VFEFRFAKMPDEPLESLP--PASL 502
Score = 57 (25.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTN 177
P Y+ ++ P+D I+++L+ + Y S+ D + TN
Sbjct: 109 PDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDFNTMF-TN 149
>UNIPROTKB|Q9H0E9 [details] [associations]
symbol:BRD8 "Bromodomain-containing protein 8" species:9606
"Homo sapiens" [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0043968 "histone H2A acetylation" evidence=IDA]
[GO:0043967 "histone H4 acetylation" evidence=IDA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IDA] [GO:0004887
"thyroid hormone receptor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007166 "cell surface receptor signaling pathway" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0005739 GO:GO:0007166
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0040008
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
EMBL:X87613 EMBL:AL136823 EMBL:AB209079 EMBL:AC109442 EMBL:AC113382
EMBL:BC008039 EMBL:BC008076 EMBL:AF016270 EMBL:X94234
IPI:IPI00016570 IPI:IPI00019226 IPI:IPI00148057 IPI:IPI00828194
PIR:S58225 PIR:S68142 RefSeq:NP_001157798.1 RefSeq:NP_006687.3
RefSeq:NP_631938.1 UniGene:Hs.519337 ProteinModelPortal:Q9H0E9
SMR:Q9H0E9 IntAct:Q9H0E9 STRING:Q9H0E9 PaxDb:Q9H0E9 PRIDE:Q9H0E9
Ensembl:ENST00000230901 Ensembl:ENST00000254900
Ensembl:ENST00000411594 GeneID:10902 KEGG:hsa:10902 UCSC:uc003lcf.1
UCSC:uc003lcg.3 UCSC:uc003lci.3 UCSC:uc021yea.1 CTD:10902
GeneCards:GC05M137475 HGNC:HGNC:19874 HPA:HPA001841 MIM:602848
neXtProt:NX_Q9H0E9 PharmGKB:PA134923194 HOGENOM:HOG000074125
HOVERGEN:HBG050732 InParanoid:Q9H0E9 KO:K11321 OrthoDB:EOG470THC
PhylomeDB:Q9H0E9 ChiTaRS:BRD8 GenomeRNAi:10902 NextBio:41403
PMAP-CutDB:Q9H0E9 ArrayExpress:Q9H0E9 Bgee:Q9H0E9 CleanEx:HS_BRD8
CleanEx:HS_SMAP2 Genevestigator:Q9H0E9 GermOnline:ENSG00000112983
GO:GO:0004887 Uniprot:Q9H0E9
Length = 1235
Score = 134 (52.2 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 39/163 (23%), Positives = 77/163 (47%)
Query: 244 HEGTSQKRSMDFMMASETEDSRDSSICTEDEQN-QCEDLFN-AVMTSTDADSRPLHEVFQ 301
H T Q ++ + S S+ S+C+ED++ Q + ++ A+M A + +
Sbjct: 674 HNATLQSHTLADSIPSSPASSQ-FSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVF 732
Query: 302 LLP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
L P + P Y+ ++ P+DL TI + I++G S + ++D++LM +NA +N
Sbjct: 733 LQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHD 792
Query: 361 IYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQS 403
+Y A +++ V + + + I +K +RG S
Sbjct: 793 VYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDS 835
Score = 116 (45.9 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 481 QLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKY 540
+ S F + S P Y +V+++P+D+ + L + + + + D + MF NA Y
Sbjct: 1123 RFSSPFLKPVSERQAPGYKDVVKRPMDLTSLKRNLSKGRIRTMAQFLRDLMLMFQNAVMY 1182
Query: 541 NEPDSHIYKDALSLQRIVLQ 560
N+ D H+Y A+ +++ VL+
Sbjct: 1183 NDSDHHVYHMAVEMRQEVLE 1202
Score = 106 (42.4 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 20/68 (29%), Positives = 40/68 (58%)
Query: 305 SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKD 364
S+++ P Y DV+ P+DL ++ R + G+ ++ +DL+LM +NA +N+ +Y
Sbjct: 1133 SERQAPGYKDVVKRPMDLTSLKRNLSKGRIRTMAQFLRDLMLMFQNAVMYNDSDHHVYHM 1192
Query: 365 AKALKKLV 372
A +++ V
Sbjct: 1193 AVEMRQEV 1200
Score = 85 (35.0 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 34/163 (20%), Positives = 68/163 (41%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL----VVTNPIDF--IKIQQKLK 189
P YH +V P+D I++ ++ ++FQ DI L+ V+ N D + +++
Sbjct: 742 PGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQ 801
Query: 190 TDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQ 249
D + + F A +L+++ +++ S RD+ + + +P
Sbjct: 802 RDVLEQIQQFLAT-QLIMQTSESGISAKSLRGRDSTRKQDASEKDSVPMGSPAFLLSLFM 860
Query: 250 KRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDAD 292
++ SE + DS + N C LF++ +S D D
Sbjct: 861 GHEWVWL-DSEQDHPNDSEL-----SNDCRSLFSSWDSSLDLD 897
Score = 40 (19.1 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 93 PKRKKIDPSDAMQQIYDVI 111
PKRK+ + + ++ + DVI
Sbjct: 78 PKRKRGEKGEVVETVEDVI 96
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 193 (73.0 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 57/269 (21%), Positives = 124/269 (46%)
Query: 134 QEPSYHEVVTNPIDFIKIQQKL-KTDEYDDLSDFQADIELLVVTNPI-DFIKIQ-QKLKT 190
Q+ +E+++ + + + +KL K D+ +E L+ N + DF K++
Sbjct: 1374 QDDELNELISRTDEELVLFKKLDKERAATDIYGKGKPLERLLTVNELPDFYKVEVDSFAV 1433
Query: 191 DEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQK 250
+L D + + +N+ ++ + E + + +++ G+S
Sbjct: 1434 QSSSELEDQYLERKRRRRNSISYTELTLDELNTVDDPSSTLMPRKRGRPRKKTNSGSSLS 1493
Query: 251 RSMDFMMASETEDSRDSSICTEDE--QNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKR 308
+ +S R ++ + + + C ++F + D R ++ +F P++K
Sbjct: 1494 TPLS-QESSLARSGRKNTPSYKQKALRRYCMEIFERLYNLQSEDGRFVNGLFLYPPNRKL 1552
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
YP+YY +I PI L I R I++ +Y +G++ D +LM NA T+NE S +Y+DAK +
Sbjct: 1553 YPDYYIIIKRPIALGKIKRNIKNDRYGDVGELIADFMLMFNNAYTYNEEHSIVYEDAKLM 1612
Query: 369 KKLVQTKKMEIEQGKFTPAGKSERIRSKR 397
+K ++ ++E+ A + E + ++
Sbjct: 1613 EKTLKEVIEDLEKNNSLHAYEEEALNEEQ 1641
Score = 161 (61.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 29/82 (35%), Positives = 54/82 (65%)
Query: 475 EPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMF 534
+ + GR ++ +F P+R YPDYY +I++P+ + I ++ ++Y + E++ADF+ MF
Sbjct: 1533 QSEDGRFVNGLFLYPPNRKLYPDYYIIIKRPIALGKIKRNIKNDRYGDVGELIADFMLMF 1592
Query: 535 DNACKYNEPDSHIYKDALSLQR 556
+NA YNE S +Y+DA +++
Sbjct: 1593 NNAYTYNEEHSIVYEDAKLMEK 1614
>SGD|S000001716 [details] [associations]
symbol:RSC4 "Component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016586 "RSC
complex" evidence=IDA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IDA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] [GO:0015616 "DNA translocase activity" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 SGD:S000001716 GO:GO:0000086 GO:GO:0006355
EMBL:BK006944 GO:GO:0006368 GO:GO:0006337 GO:GO:0016586
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359 EMBL:X65124
RefSeq:NP_012933.4 GeneID:853877 KEGG:sce:YKR008W KO:K11759
OrthoDB:EOG4GBBGR EMBL:Z28233 EMBL:AY693123 PIR:S34035
RefSeq:NP_012935.3 PDB:2R0S PDB:2R0V PDB:2R0Y PDB:2R10 PDBsum:2R0S
PDBsum:2R0V PDBsum:2R0Y PDBsum:2R10 ProteinModelPortal:Q02206
SMR:Q02206 DIP:DIP-6639N IntAct:Q02206 MINT:MINT-656919
STRING:Q02206 PaxDb:Q02206 PeptideAtlas:Q02206 EnsemblFungi:YKR008W
GeneID:853880 KEGG:sce:YKR010C CYGD:YKR008w HOGENOM:HOG000142075
OMA:LPSRKFH EvolutionaryTrace:Q02206 NextBio:975160
Genevestigator:Q02206 GermOnline:YKR008W Uniprot:Q02206
Length = 625
Score = 185 (70.2 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 64/231 (27%), Positives = 113/231 (48%)
Query: 148 FIKIQQKLKTDEYDDLSDFQADIELLVVT-NPIDFIKIQQKLKTDE-------YDD-LSD 198
FI + D+Y D+ F+ I+L +P + KIQQ + +E Y+D S+
Sbjct: 61 FISFTLDVLIDKYKDI--FKDFIKLPSRKFHPQYYYKIQQPMSINEIKSRDYEYEDGPSN 118
Query: 199 FQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLN-PQSHEGTSQKRSMDFMM 257
F D+ELL KN + + + +S +++ +++ L K N +++ S+ ++
Sbjct: 119 FLLDVELLTKNCQAYNEYDSLIVKNSMQVVMLIEFEVLKAKNLKRNYLINSEVKAKLLHY 178
Query: 258 ASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVID 317
++ D+ TE + NQ L A D L E F L K PEYY+++
Sbjct: 179 LNKLVDA------TEKKINQA--LLGASSPKNLDDKVKLSEPFMELVDKDELPEYYEIVH 230
Query: 318 VPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
P+ L + + ++ G+Y+ + D D++L+ +NA FN+P + IYKDA L
Sbjct: 231 SPMALSIVKQNLEIGQYSKIYDFIIDMLLVFQNAHIFNDPSALIYKDATTL 281
Score = 141 (54.7 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 481 QLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKY 540
+LS F L + + P+YYE++ P+ + ++ L QY + + + D + +F NA +
Sbjct: 208 KLSEPFMELVDKDELPEYYEIVHSPMALSIVKQNLEIGQYSKIYDFIIDMLLVFQNAHIF 267
Query: 541 NEPDSHIYKDALSL 554
N+P + IYKDA +L
Sbjct: 268 NDPSALIYKDATTL 281
Score = 95 (38.5 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 300 FQLLPSKKRYPEYYDVIDVPIDLRTIARR---IQDGKYASLGDMEKDLILMTKNACTFNE 356
F LPS+K +P+YY I P+ + I R +DG L D+E L+TKN +NE
Sbjct: 80 FIKLPSRKFHPQYYYKIQQPMSINEIKSRDYEYEDGPSNFLLDVE----LLTKNCQAYNE 135
Query: 357 PGSQIYKDAKALKKLVQTKKMEIEQGK 383
S I K++ + L++ + ++ + K
Sbjct: 136 YDSLIVKNSMQVVMLIEFEVLKAKNLK 162
Score = 90 (36.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 126 FIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDD-LSDFQADIELLVVT----NPID 180
FI++P ++ P Y+ + P+ +I K + EY+D S+F D+ELL N D
Sbjct: 80 FIKLPSRKFHPQYYYKIQQPMSINEI--KSRDYEYEDGPSNFLLDVELLTKNCQAYNEYD 137
Query: 181 FIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQ-EHRDAQELMELFHSTRNKLL 239
+ ++ ++ L +F+ L KN K Y NS+ + + L +L +T K+
Sbjct: 138 SLIVKNSMQVVM---LIEFEV---LKAKNLKRNYLINSEVKAKLLHYLNKLVDATEKKI- 190
Query: 240 NPQSHEGTSQKRSMD 254
N Q+ G S +++D
Sbjct: 191 N-QALLGASSPKNLD 204
>UNIPROTKB|E1BNS3 [details] [associations]
symbol:BRD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0044154 "histone H3-K14 acetylation" evidence=IEA]
[GO:0043983 "histone H4-K12 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0010971 "positive
regulation of G2/M transition of mitotic cell cycle" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000114 "regulation of transcription
involved in G1 phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005737 GO:GO:0007059 GO:GO:0010971
GO:GO:0003677 GO:GO:0006468 GO:GO:0000790 GO:GO:0000114
GO:GO:0000794 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0001833 GeneTree:ENSGT00700000104261
OMA:PVIRPPE GO:GO:0044154 GO:GO:0043983 GO:GO:0043388 GO:GO:0032968
EMBL:DAAA02019141 IPI:IPI00692227 Ensembl:ENSBTAT00000003242
Uniprot:E1BNS3
Length = 1367
Score = 136 (52.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY++I+ P+DM I +L N Y + E + DF MF N YN+P I A +L+
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 556 RIVLQTKMHLREDEDSVPDVPA 577
++ LQ L +E + V A
Sbjct: 155 KLFLQKINELPTEETEIVIVQA 176
Score = 126 (49.4 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 30/79 (37%), Positives = 38/79 (48%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY ++I+ P+DM I SKL +Y E AD MF N KYN PD + A LQ
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 557 IVLQTKMHLREDEDSVPDV 575
V + + DE P V
Sbjct: 449 -VFEMRFAKMPDEPEEPAV 466
Score = 117 (46.2 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+YY +I P+D+ TI +R+++ Y + + +D M N +N+PG I A
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 366 KALKKLVQTKKMEI 379
+AL+KL K E+
Sbjct: 151 EALEKLFLQKINEL 164
Score = 51 (23.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 19/85 (22%), Positives = 41/85 (48%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEY----DDLSDFQADIELLVVTN-PIDFIKIQ----Q 186
P Y++++ P+D I+++L+ + Y + + DF + N P D I + +
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 187 KLKTDEYDDLSDFQADIELLVKNAK 211
KL + ++L + E+++ AK
Sbjct: 155 KLFLQKINELPT--EETEIVIVQAK 177
Score = 48 (22.0 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+++L+ + Y + + D + N + K A+ L +LF
Sbjct: 100 IIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQ 159
Query: 234 TRNKL 238
N+L
Sbjct: 160 KINEL 164
>UNIPROTKB|I3L6E5 [details] [associations]
symbol:BRD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0044154 "histone H3-K14 acetylation" evidence=IEA]
[GO:0043983 "histone H4-K12 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0010971 "positive
regulation of G2/M transition of mitotic cell cycle" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000114 "regulation of transcription
involved in G1 phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005737 GO:GO:0007059 GO:GO:0010971
GO:GO:0003677 GO:GO:0006468 GO:GO:0000790 GO:GO:0000114
GO:GO:0000794 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0001833 GeneTree:ENSGT00700000104261
OMA:PVIRPPE GO:GO:0044154 GO:GO:0043983 GO:GO:0043388 GO:GO:0032968
EMBL:CU914413 EMBL:CU467692 Ensembl:ENSSSCT00000027972
Uniprot:I3L6E5
Length = 1372
Score = 136 (52.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY++I+ P+DM I +L N Y + E + DF MF N YN+P I A +L+
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 556 RIVLQTKMHLREDEDSVPDVPA 577
++ LQ L +E + V A
Sbjct: 155 KLFLQKINELPTEETEIMIVQA 176
Score = 125 (49.1 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 30/79 (37%), Positives = 38/79 (48%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY ++I+ P+DM I SKL +Y E AD MF N KYN PD + A LQ
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 557 IVLQTKMHLREDEDSVPDV 575
V + + DE P V
Sbjct: 449 -VFEMRFAKMPDEPEEPVV 466
Score = 118 (46.6 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 31/100 (31%), Positives = 52/100 (52%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+YY +I P+D+ TI +R+++ Y + + +D M N +N+PG I A
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 366 KALKKL-------VQTKKMEIE--QGKFTPAGKSERIRSK 396
+AL+KL + T++ EI Q K G+ E + +K
Sbjct: 151 EALEKLFLQKINELPTEETEIMIVQAKGRGRGRKEAVSAK 190
Score = 52 (23.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 19/85 (22%), Positives = 41/85 (48%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEY----DDLSDFQADIELLVVTN-PIDFIKIQ----Q 186
P Y++++ P+D I+++L+ + Y + + DF + N P D I + +
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 187 KLKTDEYDDLSDFQADIELLVKNAK 211
KL + ++L + E+++ AK
Sbjct: 155 KLFLQKINELPT--EETEIMIVQAK 177
Score = 48 (22.0 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+++L+ + Y + + D + N + K A+ L +LF
Sbjct: 100 IIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQ 159
Query: 234 TRNKL 238
N+L
Sbjct: 160 KINEL 164
>UNIPROTKB|O60885 [details] [associations]
symbol:BRD4 "Bromodomain-containing protein 4" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0001833 "inner
cell mass cell proliferation" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043983 "histone H4-K12 acetylation" evidence=IEA] [GO:0044154
"histone H3-K14 acetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000114 "regulation of transcription
involved in G1 phase of mitotic cell cycle" evidence=IMP]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0010971 "positive regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005737 GO:GO:0019048 GO:GO:0007059
GO:GO:0010971 GO:GO:0003677 GO:GO:0006468 GO:GO:0000790
GO:GO:0000114 GO:GO:0000794 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 PROSITE:PS51525
GO:GO:0001833 HOGENOM:HOG000231200 HOVERGEN:HBG004896 EMBL:AF386649
EMBL:Y12059 EMBL:AC004798 EMBL:AY166680 IPI:IPI00440727
IPI:IPI00440728 RefSeq:NP_055114.1 RefSeq:NP_490597.1
UniGene:Hs.187763 PDB:2I8N PDB:2LSP PDB:2NNU PDB:2OSS PDB:2OUO
PDB:2YEL PDB:2YEM PDB:3MXF PDB:3P5O PDB:3SVF PDB:3SVG PDB:3U5J
PDB:3U5K PDB:3U5L PDB:3UVW PDB:3UVX PDB:3UVY PDB:3UW9 PDB:3ZYU
PDB:4A9L PDB:4E96 PDB:4F3I PDB:4GPJ PDB:4HBV PDB:4HBW PDB:4HBX
PDB:4HBY PDBsum:2I8N PDBsum:2LSP PDBsum:2NNU PDBsum:2OSS
PDBsum:2OUO PDBsum:2YEL PDBsum:2YEM PDBsum:3MXF PDBsum:3P5O
PDBsum:3SVF PDBsum:3SVG PDBsum:3U5J PDBsum:3U5K PDBsum:3U5L
PDBsum:3UVW PDBsum:3UVX PDBsum:3UVY PDBsum:3UW9 PDBsum:3ZYU
PDBsum:4A9L PDBsum:4E96 PDBsum:4F3I PDBsum:4GPJ PDBsum:4HBV
PDBsum:4HBW PDBsum:4HBX PDBsum:4HBY ProteinModelPortal:O60885
SMR:O60885 DIP:DIP-39776N IntAct:O60885 MINT:MINT-1176376
STRING:O60885 PhosphoSite:O60885 PaxDb:O60885 PeptideAtlas:O60885
PRIDE:O60885 Ensembl:ENST00000263377 Ensembl:ENST00000371835
GeneID:23476 KEGG:hsa:23476 UCSC:uc002nar.3 UCSC:uc002nas.3
CTD:23476 GeneCards:GC19M015348 HGNC:HGNC:13575 HPA:HPA015055
MIM:608749 neXtProt:NX_O60885 PharmGKB:PA25416 InParanoid:O60885
KO:K11722 OMA:PVIRPPE OrthoDB:EOG45DWNS BindingDB:O60885
ChEMBL:CHEMBL1163125 ChiTaRS:BRD4 EvolutionaryTrace:O60885
GenomeRNAi:23476 NextBio:45817 PMAP-CutDB:O60885
ArrayExpress:O60885 Bgee:O60885 CleanEx:HS_BRD4
Genevestigator:O60885 GermOnline:ENSG00000141867 GO:GO:0044154
GO:GO:0043983 GO:GO:0043388 GO:GO:0032968 Uniprot:O60885
Length = 1362
Score = 136 (52.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY++I+ P+DM I +L N Y + E + DF MF N YN+P I A +L+
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 556 RIVLQTKMHLREDEDSVPDVPA 577
++ LQ L +E + V A
Sbjct: 155 KLFLQKINELPTEETEIMIVQA 176
Score = 125 (49.1 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 30/79 (37%), Positives = 38/79 (48%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY ++I+ P+DM I SKL +Y E AD MF N KYN PD + A LQ
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 557 IVLQTKMHLREDEDSVPDV 575
V + + DE P V
Sbjct: 449 -VFEMRFAKMPDEPEEPVV 466
Score = 117 (46.2 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+YY +I P+D+ TI +R+++ Y + + +D M N +N+PG I A
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 366 KALKKLVQTKKMEI 379
+AL+KL K E+
Sbjct: 151 EALEKLFLQKINEL 164
Score = 52 (23.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 19/85 (22%), Positives = 41/85 (48%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEY----DDLSDFQADIELLVVTN-PIDFIKIQ----Q 186
P Y++++ P+D I+++L+ + Y + + DF + N P D I + +
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 187 KLKTDEYDDLSDFQADIELLVKNAK 211
KL + ++L + E+++ AK
Sbjct: 155 KLFLQKINELPT--EETEIMIVQAK 177
Score = 48 (22.0 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ P+D I+++L+ + Y + + D + N + K A+ L +LF
Sbjct: 100 IIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQ 159
Query: 234 TRNKL 238
N+L
Sbjct: 160 KINEL 164
>MGI|MGI:1888520 [details] [associations]
symbol:Brd4 "bromodomain containing 4" species:10090 "Mus
musculus" [GO:0000114 "regulation of transcription involved in G1
phase of mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO;IDA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IPI] [GO:0007059 "chromosome segregation" evidence=IMP]
[GO:0010971 "positive regulation of G2/M transition of mitotic cell
cycle" evidence=ISO] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISO] [GO:0043388 "positive regulation of DNA binding"
evidence=IDA] [GO:0043983 "histone H4-K12 acetylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IMP] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 MGI:MGI:1888520 GO:GO:0007059
GO:GO:0003677 GO:GO:0006468 GO:GO:0000790 GO:GO:0000794
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 PROSITE:PS51525 GO:GO:0001833
GeneTree:ENSGT00700000104261 HOGENOM:HOG000231200
HOVERGEN:HBG004896 CTD:23476 KO:K11722 ChiTaRS:BRD4 GO:GO:0044154
GO:GO:0043983 GO:GO:0043388 EMBL:AF273217 EMBL:AF461395
EMBL:AF461396 IPI:IPI00652110 IPI:IPI00885355 RefSeq:NP_065254.3
RefSeq:NP_932762.2 UniGene:Mm.253518 PDB:2DWW PDB:2JNS PDB:3JVJ
PDB:3JVK PDB:3JVL PDB:3JVM PDB:3MUK PDB:3MUL PDBsum:2DWW
PDBsum:2JNS PDBsum:3JVJ PDBsum:3JVK PDBsum:3JVL PDBsum:3JVM
PDBsum:3MUK PDBsum:3MUL ProteinModelPortal:Q9ESU6 SMR:Q9ESU6
IntAct:Q9ESU6 MINT:MINT-1176459 STRING:Q9ESU6 PhosphoSite:Q9ESU6
PaxDb:Q9ESU6 PRIDE:Q9ESU6 Ensembl:ENSMUST00000114475 GeneID:57261
KEGG:mmu:57261 EvolutionaryTrace:Q9ESU6 NextBio:313577 Bgee:Q9ESU6
CleanEx:MM_BRD4 Genevestigator:Q9ESU6 GermOnline:ENSMUSG00000024002
Uniprot:Q9ESU6
Length = 1400
Score = 136 (52.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY++I+ P+DM I +L N Y + E + DF MF N YN+P I A +L+
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 556 RIVLQTKMHLREDEDSVPDVPA 577
++ LQ L +E + V A
Sbjct: 155 KLFLQKINELPTEETEIMIVQA 176
Score = 125 (49.1 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 30/79 (37%), Positives = 38/79 (48%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY ++I+ P+DM I SKL +Y E AD MF N KYN PD + A LQ
Sbjct: 390 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 449
Query: 557 IVLQTKMHLREDEDSVPDV 575
V + + DE P V
Sbjct: 450 -VFEMRFAKMPDEPEEPVV 467
Score = 117 (46.2 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+YY +I P+D+ TI +R+++ Y + + +D M N +N+PG I A
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 366 KALKKLVQTKKMEI 379
+AL+KL K E+
Sbjct: 151 EALEKLFLQKINEL 164
Score = 53 (23.7 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 25/117 (21%), Positives = 53/117 (45%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEY----DDLSDFQADIELLVVTN-PIDFIKIQ----Q 186
P Y++++ P+D I+++L+ + Y + + DF + N P D I + +
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 187 KLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQS 243
KL + ++L + E+++ AK R +E A+ + +T +PQ+
Sbjct: 155 KLFLQKINELPT--EETEIMIVQAKG-RGRGRKETGAAKPGVSTVPNTTQASTSPQT 208
>CGD|CAL0004406 [details] [associations]
symbol:orf19.2041 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0006337
"nucleosome disassembly" evidence=IEA] [GO:0015616 "DNA translocase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 CGD:CAL0004406 Gene3D:1.20.920.10
SUPFAM:SSF47370 eggNOG:COG5076 EMBL:AACQ01000031 EMBL:AACQ01000030
KO:K11759 RefSeq:XP_719490.1 RefSeq:XP_719615.1
ProteinModelPortal:Q5AD26 GeneID:3638772 GeneID:3638808
KEGG:cal:CaO19.2041 KEGG:cal:CaO19.9589 Uniprot:Q5AD26
Length = 636
Score = 150 (57.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 46/144 (31%), Positives = 68/144 (47%)
Query: 248 SQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNA----VMTSTDADSRPLHEVFQLL 303
SQ + + TE+S++ ++ T Q D F + V D D L F L
Sbjct: 8 SQSSAESSPVKKSTEESQNVAV-THSPQEYL-DFFTSTLDMVFNLRDGDEE-LAPPFIKL 64
Query: 304 PSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDME--KDLILMTKNACTFNEPGSQI 361
PSKK YP+YY +I PI L I +RI+ +Y+ E D L+ +NA T+N P S I
Sbjct: 65 PSKKFYPDYYHLIKQPISLNEIGKRIKT-RYSGTSSREFLNDFELLLENASTYNSPDSWI 123
Query: 362 YKDAKALKKLVQTKKMEIEQGKFT 385
+ A+ + V+ + E E T
Sbjct: 124 VESARKIVNFVEGQVEEFESTSST 147
Score = 130 (50.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 69/314 (21%), Positives = 127/314 (40%)
Query: 102 DAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYD 161
D D++ N + D L PFI++P K+ P Y+ ++ PI +I +++KT Y
Sbjct: 38 DFFTSTLDMVFNLRDGDEEL-APPFIKLPSKKFYPDYYHLIKQPISLNEIGKRIKT-RYS 95
Query: 162 DLS--DFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQ 219
S +F D ELL+ N + + ++ + +E + T N
Sbjct: 96 GTSSREFLNDFELLL-ENASTYNSPDSWIVESARKIVNFVEGQVEEFESTSST----NLS 150
Query: 220 EHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQ-C 278
++ A + + R KL + T + +F S + ++ + T + C
Sbjct: 151 TNKAADDTKK----PRIKLKLKSIKKQTETETGPEF--GSLVKVRKEEPLITFGRLAEFC 204
Query: 279 EDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS-- 336
++ N V+ + L F + Y +Y D + P+ TI ++ K S
Sbjct: 205 INILNDVINHKFPNQGVLSGPFLEEVDTEVYTDYLDYVTKPMSFNTILSNLEKKKLLSPK 264
Query: 337 ---LGDMEK--DLI-LMTKNACTFNEPGSQIYKDAKALKKLVQTK------KMEIEQGKF 384
L +++K D L+ NA +N SQIY+DA L++ + ++E E K
Sbjct: 265 FPLLDNLKKFHDTTTLIFSNAKAYNNEDSQIYQDAVILEEYFNEQYNKLKSRIESEADKL 324
Query: 385 TPAGKSERIRSKRI 398
P+ ++ RI
Sbjct: 325 HPSTPKLKLNLGRI 338
Score = 129 (50.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 31/107 (28%), Positives = 55/107 (51%)
Query: 455 VTAASLQKMRILYNTIKETCEPKTG-RQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIAS 513
VT + + + +T+ + G +L+ F +LPS+ YPDYY +I++P+ + I
Sbjct: 29 VTHSPQEYLDFFTSTLDMVFNLRDGDEELAPPFIKLPSKKFYPDYYHLIKQPISLNEIGK 88
Query: 514 KLRYNQYEHLD--EMVADFIQMFDNACKYNEPDSHIYKDALSLQRIV 558
+++ +Y E + DF + +NA YN PDS I + A + V
Sbjct: 89 RIK-TRYSGTSSREFLNDFELLLENASTYNSPDSWIVESARKIVNFV 134
Score = 81 (33.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 27/88 (30%), Positives = 40/88 (45%)
Query: 495 YPDYYEVIRKPVDMEMIAS-----KLRYNQYEHLDEMVA--DFIQM-FDNACKYNEPDSH 546
Y DY + + KP+ I S KL ++ LD + D + F NA YN DS
Sbjct: 235 YTDYLDYVTKPMSFNTILSNLEKKKLLSPKFPLLDNLKKFHDTTTLIFSNAKAYNNEDSQ 294
Query: 547 IYKDALSLQRIVLQTKMHLREDEDSVPD 574
IY+DA+ L+ + L+ +S D
Sbjct: 295 IYQDAVILEEYFNEQYNKLKSRIESEAD 322
>UNIPROTKB|F1MMU3 [details] [associations]
symbol:BRD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0006357 GO:GO:0003682
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104261 OMA:NNNKKPA
EMBL:DAAA02032357 EMBL:DAAA02032358 IPI:IPI00711116
UniGene:Bt.74262 Ensembl:ENSBTAT00000013992 Uniprot:F1MMU3
Length = 722
Score = 135 (52.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I+ P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 71 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 130
Query: 556 RIVLQTKMHLREDE-DSVPDVP 576
+I LQ + ++E + +P P
Sbjct: 131 KIFLQKVAQMPQEEVELLPPAP 152
Score = 118 (46.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 31/110 (28%), Positives = 56/110 (50%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+Y+ +I P+D+ TI +R+++ Y S + +D M N +N+P I A
Sbjct: 67 KLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMA 126
Query: 366 KALKKL-----VQTKKMEIEQGKFTPAGKSERIRS-KRIRGGQSLSAITA 409
+AL+K+ Q + E+E P GK + S + G Q ++A+++
Sbjct: 127 QALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPASGTQSAGSQQVAAVSS 176
Score = 116 (45.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ +Y AD MF N KYN PD + A LQ
Sbjct: 347 DYHDIIKHPMDLSTVKKKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQD 406
Query: 557 IVLQTKMHLREDEDSVPDVPA 577
+ + ++ P +PA
Sbjct: 407 VFEMRFAKMPDEPAEAPALPA 427
Score = 71 (30.1 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ NP+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 71 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 130
Query: 190 TDEYDDLSDF-QADIELL 206
++ Q ++ELL
Sbjct: 131 KIFLQKVAQMPQEEVELL 148
Score = 63 (27.2 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 22/103 (21%), Positives = 44/103 (42%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
++ NP+D I+++L+ + Y S+ D + N + K AQ L ++F
Sbjct: 76 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQ 135
Query: 234 TRNKL------LNPQSHEGTSQKRSMDFMMASETEDSRDSSIC 270
++ L P + +G +K + A + + SS+C
Sbjct: 136 KVAQMPQEEVELLPPAPKGKGRKPASGTQSAGSQQVAAVSSVC 178
>RGD|1308925 [details] [associations]
symbol:Brd3 "bromodomain containing 3" species:10116 "Rattus
norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 RGD:1308925 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 IPI:IPI01007604
Ensembl:ENSRNOT00000067299 UCSC:RGD:1308925 ArrayExpress:E9PTC5
Uniprot:E9PTC5
Length = 742
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I+ P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 71 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 130
Query: 556 RIVLQTKMHLREDE-DSVPDVP 576
+I LQ + ++E + +P P
Sbjct: 131 KIFLQKVAQMPQEEVELLPPAP 152
Score = 119 (46.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ +Y AD MF N KYN PD + A LQ
Sbjct: 347 DYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQD 406
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELLT 584
+ + ++ VP +PA +++
Sbjct: 407 VFEMRFAKMPDEPMEVPALPAPTAPIVS 434
Score = 115 (45.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+Y+ +I P+D+ TI +R+++ Y S + +D M N +N+P I A
Sbjct: 67 KLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMA 126
Query: 366 KALKKL-----VQTKKMEIEQGKFTPAGKSER-IRSKRIRGGQSLSAITA 409
+AL+K+ Q + E+E P GK + + G Q + A+++
Sbjct: 127 QALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQNAGAQQMGAVSS 176
Score = 71 (30.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ NP+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 71 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 130
Query: 190 TDEYDDLSDF-QADIELL 206
++ Q ++ELL
Sbjct: 131 KIFLQKVAQMPQEEVELL 148
Score = 57 (25.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELF 231
++ NP+D I+++L+ + Y S+ D + N + K AQ L ++F
Sbjct: 76 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 185 (70.2 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 40/139 (28%), Positives = 73/139 (52%)
Query: 240 NPQSHEGTSQKRSMDFMMASETEDSRDSSIC------TEDE-QNQCEDLFNAVMTSTDAD 292
N Q+ ++R E +DS D + T+ E + ++ + ++ + D
Sbjct: 1141 NNQAVAERKKQRKRKMAGLDENDDSMDDVVLQHKKKKTDPELAEKINEMLDVILEYKNED 1200
Query: 293 SRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNAC 352
+ +VFQ LP++K P+YY VI P+D I ++I+ G+Y + ++ D+ L+ NA
Sbjct: 1201 GELIADVFQTLPTRKELPDYYQVISKPMDFDRINKKIETGRYTVMEELNDDMNLLVNNAQ 1260
Query: 353 TFNEPGSQIYKDAKALKKL 371
T+NE GS+IY ++ + KL
Sbjct: 1261 TYNEEGSEIYVSSETIGKL 1279
Score = 168 (64.2 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 30/83 (36%), Positives = 54/83 (65%)
Query: 94 KRKKIDP--SDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKI 151
K+KK DP ++ + ++ DVI +K EDG L+ D F +P +++ P Y++V++ P+DF +I
Sbjct: 1174 KKKKTDPELAEKINEMLDVILEYKNEDGELIADVFQTLPTRKELPDYYQVISKPMDFDRI 1233
Query: 152 QQKLKTDEYDDLSDFQADIELLV 174
+K++T Y + + D+ LLV
Sbjct: 1234 NKKIETGRYTVMEELNDDMNLLV 1256
Score = 152 (58.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 31/97 (31%), Positives = 57/97 (58%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
+K+ + + I E + + G ++ +FQ LP+R + PDYY+VI KP+D + I K+ +Y
Sbjct: 1184 EKINEMLDVILEY-KNEDGELIADVFQTLPTRKELPDYYQVISKPMDFDRINKKIETGRY 1242
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRI 557
++E+ D + +NA YNE S IY + ++ ++
Sbjct: 1243 TVMEELNDDMNLLVNNAQTYNEEGSEIYVSSETIGKL 1279
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 42/180 (23%), Positives = 80/180 (44%)
Query: 124 DPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEY--DDLSDFQADIEL----LVVTN 177
D ++ KK+ +P E + +D I ++ K + E D EL V++
Sbjct: 1168 DVVLQHKKKKTDPELAEKINEMLDVI-LEYKNEDGELIADVFQTLPTRKELPDYYQVISK 1226
Query: 178 PIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
P+DF +I +K++T Y + + D+ LLV NA+T+ + S+ + ++ + +L+ +K
Sbjct: 1227 PMDFDRINKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYVSSETIGKLWKEQYDK 1286
Query: 238 LLNPQSH-EGTSQKRSMDFMMASETEDSRDSSICTED-EQNQCEDLFNAVMTSTDADSRP 295
+NP E +K+ S + S + D ++ Q +M T S P
Sbjct: 1287 FMNPPKPVEEPVKKKEPSTPSTSSSRPSTSGTPSVSDLQRTQQATAQQMLMLMTHMQSLP 1346
Score = 46 (21.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 340 MEKDLILMTK-NACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
+++D L T N + Q ++A+ +KL + +KME E+
Sbjct: 236 LKRDTTLETALNPYAYRRTKRQSLREARVTEKLEKQQKMEQER 278
Score = 41 (19.5 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 27/114 (23%), Positives = 48/114 (42%)
Query: 100 PSDAMQQIYDVIRNFK-KEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTD 158
P D ++ +D + +E+G + D ++R+E Y + + F+K + +
Sbjct: 1081 PDDILKLSFDYEEMERAREEGREVVDQTPNQRRRRREVDYSSDLLSDEQFMK-----QVE 1135
Query: 159 EYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKT 212
E +D ++ QA E K Q+K K D+ D D+ L K KT
Sbjct: 1136 EVEDENN-QAVAER----------KKQRKRKMAGLDENDDSMDDVVLQHKKKKT 1178
>UNIPROTKB|F1S033 [details] [associations]
symbol:BRD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0006357 GO:GO:0003682
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104261 CTD:8019 KO:K11721
OMA:NNNKKPA EMBL:CU627992 RefSeq:XP_003484360.1
Ensembl:ENSSSCT00000006321 GeneID:100152283 KEGG:ssc:100152283
Uniprot:F1S033
Length = 726
Score = 135 (52.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I+ P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 71 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 130
Query: 556 RIVLQTKMHLREDE-DSVPDVP 576
+I LQ + ++E + +P P
Sbjct: 131 KIFLQKVAQMPQEEVELLPPAP 152
Score = 116 (45.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 31/110 (28%), Positives = 56/110 (50%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+Y+ +I P+D+ TI +R+++ Y S + +D M N +N+P I A
Sbjct: 67 KLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMA 126
Query: 366 KALKKL-----VQTKKMEIEQGKFTPAGKSERIRS-KRIRGGQSLSAITA 409
+AL+K+ Q + E+E P GK + S + G Q ++A+++
Sbjct: 127 QALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPASGTQSAGTQQVAAVSS 176
Score = 115 (45.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ +Y AD MF N KYN PD + A LQ
Sbjct: 347 DYHDIIKHPMDLSTVKKKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQD 406
Query: 557 IVLQTKMHLREDEDSVPDVPA 577
+ + ++ P +PA
Sbjct: 407 VFEMRFAKMPDEPVEAPALPA 427
Score = 71 (30.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ NP+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 71 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 130
Query: 190 TDEYDDLSDF-QADIELL 206
++ Q ++ELL
Sbjct: 131 KIFLQKVAQMPQEEVELL 148
Score = 57 (25.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELF 231
++ NP+D I+++L+ + Y S+ D + N + K AQ L ++F
Sbjct: 76 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>ASPGD|ASPL0000050693 [details] [associations]
symbol:AN1984 species:162425 "Emericella nidulans"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0001047 "core promoter
binding" evidence=IEA] [GO:0001094 "TFIID-class transcription
factor binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IEA] [GO:0090054 "regulation of chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0031452 "negative
regulation of heterochromatin assembly" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0009301 "snRNA
transcription" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:1900051 "positive regulation of histone exchange"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 EMBL:BN001307
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 KO:K11684 OrthoDB:EOG44TSHM OMA:QETEIEL
EMBL:AACD01000030 RefSeq:XP_659588.1 ProteinModelPortal:Q5BBU6
STRING:Q5BBU6 EnsemblFungi:CADANIAT00008646 GeneID:2875085
KEGG:ani:AN1984.2 HOGENOM:HOG000190752 Uniprot:Q5BBU6
Length = 808
Score = 120 (47.3 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 32/100 (32%), Positives = 51/100 (51%)
Query: 304 PSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYK 363
P K P Y+DVI P+DL TI +++++ Y S + D LM +NA FN P +
Sbjct: 288 PVKMAIPTYFDVIKEPMDLGTIEQKLKNNVYTSPQSVFNDFELMVRNAHVFNGPDHIVSV 347
Query: 364 DAKAL-----KKLVQTKKM-EIEQGKFTPAGKSERIRSKR 397
+ K L K+++ K E+E+ K A S+ ++R
Sbjct: 348 EGKRLQATFEKQMLNLPKADEVEEKKPKKAASSKTSNARR 387
Score = 111 (44.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 490 PSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYK 549
P + P Y+ +I+KP+D+ ++SKL QYE+ E D Q+ N K+N IY
Sbjct: 485 PVALNIPTYHSIIKKPMDLSTVSSKLNTGQYENAKEFEMDIRQIMKNCFKFNLKGDPIYM 544
Query: 550 DALSLQRI 557
L+ +
Sbjct: 545 AGEKLEEV 552
Score = 108 (43.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 304 PSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYK 363
P P Y+ +I P+DL T++ ++ G+Y + + E D+ + KN FN G IY
Sbjct: 485 PVALNIPTYHSIIKKPMDLSTVSSKLNTGQYENAKEFEMDIRQIMKNCFKFNLKGDPIYM 544
Query: 364 DAKALKKLVQTK 375
+ L+++ K
Sbjct: 545 AGEKLEEVFNAK 556
Score = 88 (36.0 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHS 233
V+ P+D I+QKLK + Y D EL+V+NA F N +H + E L +
Sbjct: 299 VIKEPMDLGTIEQKLKNNVYTSPQSVFNDFELMVRNAHVF---NGPDHIVSVEGKRLQAT 355
Query: 234 TRNKLLN-PQSHEGTSQKRSMDFMMASETEDSR 265
++LN P++ E +K +S+T ++R
Sbjct: 356 FEKQMLNLPKADEVEEKKPKK--AASSKTSNAR 386
Score = 79 (32.9 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 130 PKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLV----VTN-PIDFIKI 184
P K P+Y +V+ P+D I+QKLK + Y D EL+V V N P + +
Sbjct: 288 PVKMAIPTYFDVIKEPMDLGTIEQKLKNNVYTSPQSVFNDFELMVRNAHVFNGPDHIVSV 347
Query: 185 QQK-LK-TDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRD 223
+ K L+ T E L+ +AD K K + S RD
Sbjct: 348 EGKRLQATFEKQMLNLPKADEVEEKKPKKAASSKTSNARRD 388
>MGI|MGI:1914632 [details] [associations]
symbol:Brd3 "bromodomain containing 3" species:10090 "Mus
musculus" [GO:0003682 "chromatin binding" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0070577
"histone acetyl-lysine binding" evidence=ISO] InterPro:IPR001487
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
MGI:MGI:1914632 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 PROSITE:PS51525
GeneTree:ENSGT00700000104261 HOGENOM:HOG000231200
HOVERGEN:HBG004896 CTD:8019 KO:K11721 OMA:NNNKKPA EMBL:AF269193
EMBL:BC031536 EMBL:AK037435 EMBL:AK076472 IPI:IPI00410791
IPI:IPI00410792 RefSeq:NP_001107045.1 RefSeq:NP_001107046.1
RefSeq:NP_075825.3 UniGene:Mm.28721 PDB:2L5E PDBsum:2L5E
ProteinModelPortal:Q8K2F0 SMR:Q8K2F0 STRING:Q8K2F0
PhosphoSite:Q8K2F0 PaxDb:Q8K2F0 PRIDE:Q8K2F0
Ensembl:ENSMUST00000028282 Ensembl:ENSMUST00000077737
Ensembl:ENSMUST00000113941 Ensembl:ENSMUST00000164296 GeneID:67382
KEGG:mmu:67382 EvolutionaryTrace:Q8K2F0 NextBio:324408 Bgee:Q8K2F0
CleanEx:MM_BRD3 Genevestigator:Q8K2F0 GermOnline:ENSMUSG00000026918
Uniprot:Q8K2F0
Length = 726
Score = 135 (52.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I+ P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 70 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 129
Query: 556 RIVLQTKMHLREDE-DSVPDVP 576
+I LQ + ++E + +P P
Sbjct: 130 KIFLQKVAQMPQEEVELLPPAP 151
Score = 115 (45.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 23/88 (26%), Positives = 41/88 (46%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ +Y AD MF N KYN PD + A LQ
Sbjct: 346 DYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQD 405
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELLT 584
+ + ++ P +PA +++
Sbjct: 406 VFEMRFAKMPDEPMEAPALPAPTAPIVS 433
Score = 115 (45.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 30/110 (27%), Positives = 55/110 (50%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+Y+ +I P+D+ TI +R+++ Y S + +D M N +N+P I A
Sbjct: 66 KLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMA 125
Query: 366 KALKKL-----VQTKKMEIEQGKFTPAGKSER-IRSKRIRGGQSLSAITA 409
+AL+K+ Q + E+E P GK + + G Q ++A+++
Sbjct: 126 QALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQNAGSQQVAAVSS 175
Score = 71 (30.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ NP+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 70 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 129
Query: 190 TDEYDDLSDF-QADIELL 206
++ Q ++ELL
Sbjct: 130 KIFLQKVAQMPQEEVELL 147
Score = 57 (25.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELF 231
++ NP+D I+++L+ + Y S+ D + N + K AQ L ++F
Sbjct: 75 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 132
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 182 (69.1 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 36/117 (30%), Positives = 65/117 (55%)
Query: 260 ETEDSRDSSICTEDEQNQCEDLFNAVMTSTD-ADSRPLHEVFQLLPSKKRYPEYYDVIDV 318
+ +D D+ T+ ++C + + + TD D L ++F LPS+K YP+YY +I
Sbjct: 1182 DVDDDDDNEPETDGFTSKCLSVIDEITALTDETDGHNLSDIFIKLPSRKLYPDYYSIIKK 1241
Query: 319 PIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTK 375
P+ + + +++ K+AS D +L M NA T+N+ GS ++ DA ++KL+ K
Sbjct: 1242 PVSINQVKKQLDQEKFASFEDFIAELKQMCLNAKTYNQEGSFVHTDATVIEKLLDEK 1298
Score = 160 (61.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 32/89 (35%), Positives = 53/89 (59%)
Query: 479 GRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNAC 538
G LS IF +LPSR YPDYY +I+KPV + + +L ++ ++ +A+ QM NA
Sbjct: 1216 GHNLSDIFIKLPSRKLYPDYYSIIKKPVSINQVKKQLDQEKFASFEDFIAELKQMCLNAK 1275
Query: 539 KYNEPDSHIYKDALSLQRIVLQTKMHLRE 567
YN+ S ++ DA ++++ L K+ +E
Sbjct: 1276 TYNQEGSFVHTDATVIEKL-LDEKLANQE 1303
>SGD|S000002228 [details] [associations]
symbol:BDF2 "Protein involved in transcription initiation"
species:4932 "Saccharomyces cerevisiae" [GO:0001047 "core promoter
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IC]
[GO:0031452 "negative regulation of heterochromatin assembly"
evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0001094
"TFIID-class transcription factor binding" evidence=IPI]
[GO:0042393 "histone binding" evidence=IDA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0030435 "sporulation
resulting in formation of a cellular spore" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 SGD:S000002228 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006281 EMBL:BK006938 GO:GO:0006351
GO:GO:0030435 GO:GO:0001047 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
KO:K11684 OrthoDB:EOG44TSHM PROSITE:PS51525
GeneTree:ENSGT00700000104285 HOGENOM:HOG000248774 GO:GO:0031452
EMBL:Z74119 PIR:S67605 RefSeq:NP_010213.1 ProteinModelPortal:Q07442
SMR:Q07442 DIP:DIP-1337N IntAct:Q07442 MINT:MINT-410894
STRING:Q07442 PaxDb:Q07442 EnsemblFungi:YDL070W GeneID:851488
KEGG:sce:YDL070W CYGD:YDL070w NextBio:968816 Genevestigator:Q07442
GermOnline:YDL070W Uniprot:Q07442
Length = 638
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 79/370 (21%), Positives = 150/370 (40%)
Query: 233 STRNKLLNPQSHEGTSQKRSMD---FMMASETEDSRDSSICTED-EQNQCEDLFNAVM-T 287
S ++ L+P S S S + ETE + ++ + E+ +Q + L +++ T
Sbjct: 90 SHAHQTLSPISISNASTPESFPEHPLGLERETEPALEAEMEAEELPPHQSKYLLSSIKAT 149
Query: 288 STDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILM 347
D+RP + P P Y++ + P+DL I ++Q Y S+ + D M
Sbjct: 150 KRLKDARPFLKPVD--PIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTM 207
Query: 348 TKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAG---KSERIRSKRIRGGQSL 404
N FN P S I AK ++K + KK+ + PA K+ R R K S
Sbjct: 208 VDNCLNFNGPESSISSMAKRIQKYFE-KKLSAMPPRVLPASALKKTSRNRKKN-EDMDSP 265
Query: 405 SAITAALXXXXXXXXXXXXXXXXXPNSPLWQVYDAIRNAKTQGVIFFFFGVTAASLQK-M 463
I ++ P ++ +K I+ + +LQK
Sbjct: 266 LVIRRSVSTTNDNIGESGNREGVSGGRPKRTIHPP--KSKDLFDIYENSKPKSKTLQKKF 323
Query: 464 RILYNTIKETCEPKTGRQLSHIFQRL-PSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEH 522
R +K K Q + P + P+Y++V++ P+D+ I++ L +Y+
Sbjct: 324 RTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKT 383
Query: 523 LDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVPDVPAAVQEL 582
+D+ V D +F N ++N + ++ L+ + H E++D + ++ +L
Sbjct: 384 IDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELF---NFHWLENQDILNEIETD-SDL 439
Query: 583 LTSLFTSVYN 592
++S Y+
Sbjct: 440 EEDNYSSSYS 449
Score = 158 (60.7 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 65/265 (24%), Positives = 113/265 (42%)
Query: 125 PFIRI--PKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDL----SDFQADIE-LLVVTN 177
PF++ P P Y V P+D I+ KL+ + Y + SDF+ ++ L
Sbjct: 157 PFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNG 216
Query: 178 PIDFIKIQQKLKTDEYDDLSDFQADIELLVKNA--KTFYKRNSQEHRDAQELMELFHSTR 235
P I K + +Y + +L +A KT R E D+ ++ ST
Sbjct: 217 PESSISSMAK-RIQKYFEKKLSAMPPRVLPASALKKTSRNRKKNEDMDSPLVIRRSVSTT 275
Query: 236 NKLLNPQSH-EGTS---QKRSMDFMMASET----EDSRDSSICTEDEQNQCEDLFNAVMT 287
N + + EG S KR++ + + E+S+ S + + C + +M+
Sbjct: 276 NDNIGESGNREGVSGGRPKRTIHPPKSKDLFDIYENSKPKSKTLQKKFRTCLKILKVLMS 335
Query: 288 STDADSR-PLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLIL 346
++D P + P P Y+DV+ P+DL TI+ + + KY ++ DL L
Sbjct: 336 KKNSDINFPFLQPVD--PIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNL 393
Query: 347 MTKNACTFNEPGSQIYKDAKALKKL 371
+ N FN G++++ K LK+L
Sbjct: 394 VFYNCFQFNPEGNEVHSMGKKLKEL 418
>UNIPROTKB|Q15059 [details] [associations]
symbol:BRD3 "Bromodomain-containing protein 3" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=NAS] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 EMBL:CH471090 GO:GO:0006357
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 PROSITE:PS51525 HOGENOM:HOG000231200
HOVERGEN:HBG004896 EMBL:D26362 EMBL:AY513270 EMBL:AL445931
EMBL:BC032124 EMBL:Z81330 IPI:IPI00014266 IPI:IPI00410716
RefSeq:NP_031397.1 UniGene:Hs.522472 UniGene:Hs.654869 PDB:2E7N
PDB:2NXB PDB:2OO1 PDB:2YW5 PDB:3S91 PDB:3S92 PDBsum:2E7N
PDBsum:2NXB PDBsum:2OO1 PDBsum:2YW5 PDBsum:3S91 PDBsum:3S92
ProteinModelPortal:Q15059 SMR:Q15059 IntAct:Q15059 STRING:Q15059
PhosphoSite:Q15059 DMDM:12643726 PaxDb:Q15059 PRIDE:Q15059
DNASU:8019 Ensembl:ENST00000303407 Ensembl:ENST00000357885
Ensembl:ENST00000371834 GeneID:8019 KEGG:hsa:8019 UCSC:uc004cew.3
UCSC:uc004cex.2 CTD:8019 GeneCards:GC09M136897 HGNC:HGNC:1104
HPA:HPA051830 MIM:601541 neXtProt:NX_Q15059 PharmGKB:PA25415
InParanoid:Q15059 KO:K11721 OMA:NNNKKPA OrthoDB:EOG476K03
BindingDB:Q15059 ChEMBL:CHEMBL1795186 EvolutionaryTrace:Q15059
GenomeRNAi:8019 NextBio:30578 ArrayExpress:Q15059 Bgee:Q15059
CleanEx:HS_BRD3 Genevestigator:Q15059 GermOnline:ENSG00000169925
Uniprot:Q15059
Length = 726
Score = 135 (52.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I+ P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 71 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 130
Query: 556 RIVLQTKMHLREDE-DSVPDVP 576
+I LQ + ++E + +P P
Sbjct: 131 KIFLQKVAQMPQEEVELLPPAP 152
Score = 114 (45.2 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 30/110 (27%), Positives = 55/110 (50%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+Y+ +I P+D+ TI +R+++ Y S + +D M N +N+P I A
Sbjct: 67 KLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMA 126
Query: 366 KALKKL-----VQTKKMEIEQGKFTPAGKSER-IRSKRIRGGQSLSAITA 409
+AL+K+ Q + E+E P GK + + G Q ++A+++
Sbjct: 127 QALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQSAGTQQVAAVSS 176
Score = 113 (44.8 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 23/88 (26%), Positives = 41/88 (46%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ +Y AD MF N KYN PD + A LQ
Sbjct: 347 DYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQD 406
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELLT 584
+ + ++ P +PA +++
Sbjct: 407 VFEMRFAKMPDEPVEAPALPAPAAPMVS 434
Score = 71 (30.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ NP+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 71 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 130
Query: 190 TDEYDDLSDF-QADIELL 206
++ Q ++ELL
Sbjct: 131 KIFLQKVAQMPQEEVELL 148
Score = 57 (25.1 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELF 231
++ NP+D I+++L+ + Y S+ D + N + K AQ L ++F
Sbjct: 76 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>ZFIN|ZDB-GENE-030131-5928 [details] [associations]
symbol:brdt "bromodomain, testis-specific"
species:7955 "Danio rerio" [GO:0001207 "histone displacement"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0007140
"male meiosis" evidence=ISS] [GO:0007141 "male meiosis I"
evidence=ISS] [GO:0051039 "positive regulation of transcription
during meiosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine
binding" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
ZFIN:ZDB-GENE-030131-5928 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104261
EMBL:BX927081 Ensembl:ENSDART00000151136 Ensembl:ENSDART00000151422
Uniprot:I3IS77
Length = 1093
Score = 128 (50.1 bits), Expect = 0.00023, P = 0.00023
Identities = 28/78 (35%), Positives = 40/78 (51%)
Query: 492 RHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDA 551
R + PDYY +I+ P+D+ I +L N Y E V DF MF N YN P I A
Sbjct: 62 RLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMA 121
Query: 552 LSLQRIVLQTKMHLREDE 569
L+++ L+ + E+E
Sbjct: 122 QVLEKLFLEKVAEMPEEE 139
Score = 114 (45.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+YY +I P+DL TI +R+++ Y + +D M N +N PG I A+ L+
Sbjct: 66 PDYYTIIKNPMDLTTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLE 125
Query: 370 KLVQTKKMEIEQGKF 384
KL K E+ + ++
Sbjct: 126 KLFLEKVAEMPEEEY 140
Score = 111 (44.1 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+E+I +P+DM I K+ +Y + AD MF N KYN P + A LQ
Sbjct: 308 DYHEIIHQPMDMSTIKKKMEAREYTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQD 367
Query: 557 I 557
+
Sbjct: 368 V 368
>UNIPROTKB|E1C8U8 [details] [associations]
symbol:BRD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0006357 GO:GO:0003682
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104261 CTD:8019 KO:K11721
OMA:NNNKKPA EMBL:AADN02026448 EMBL:AADN02026449 IPI:IPI00597724
RefSeq:XP_425330.2 UniGene:Gga.9809 PRIDE:E1C8U8
Ensembl:ENSGALT00000004226 GeneID:427757 KEGG:gga:427757
NextBio:20828931 Uniprot:E1C8U8
Length = 722
Score = 143 (55.4 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I+ P+DM I +L +N Y E + DF MF N YN+P I A +L+
Sbjct: 67 PDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 126
Query: 556 RIVLQTKMHLREDE-DSVPDVP 576
+I LQ + ++E + +P VP
Sbjct: 127 KIFLQKVAQMPQEEVELLPPVP 148
Score = 114 (45.2 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ +Y+ AD MF N KYN PD + A LQ
Sbjct: 343 DYHDIIKHPMDLSTVKKKMDSREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQD 402
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELLTSLFTSVYNHQK 595
+ + ++ P P +++ S ++ ++
Sbjct: 403 VFEMRFAKMPDEPAEAPPPPPPTAPVVSKSTESSHSSEE 441
Score = 106 (42.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K P+Y+ +I P+D+ TI +R++ Y S + +D M N +N+P I A
Sbjct: 63 KLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMA 122
Query: 366 KALKKL-----VQTKKMEIEQGKFTPAGKSER 392
+AL+K+ Q + E+E P GK +
Sbjct: 123 QALEKIFLQKVAQMPQEEVELLPPVPKGKGRK 154
Score = 70 (29.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 91 TRPKR--KKIDPSDAMQQIYDVIRNFKKEDGAL-LCDPFIRIPKKRQEPSYHEVVTNPID 147
T P + +K + MQ + V++ K A P I K P YH+++ NP+D
Sbjct: 23 TNPNKPGRKTNQLQYMQNV--VVKTLWKHQFAWPFYQPVDAI--KLNLPDYHKIIKNPMD 78
Query: 148 FIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLKTDEYDDLSDF-Q 200
I+++L+ + Y S+ D + + P D I + Q L+ ++ Q
Sbjct: 79 MGTIKKRLEHNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQ 138
Query: 201 ADIELL 206
++ELL
Sbjct: 139 EEVELL 144
Score = 55 (24.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELF 231
++ NP+D I+++L+ + Y S+ D + N + K AQ L ++F
Sbjct: 72 IIKNPMDMGTIKKRLEHNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>FB|FBgn0004656 [details] [associations]
symbol:fs(1)h "female sterile (1) homeotic" species:7227
"Drosophila melanogaster" [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=NAS] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0004672 "protein kinase activity"
evidence=NAS] [GO:0007362 "terminal region determination"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0016021
GO:GO:0045892 EMBL:AE014298 GO:GO:0007476 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
PROSITE:PS51525 GeneTree:ENSGT00700000104285 GO:GO:0007362
EMBL:M23221 EMBL:M23222 EMBL:BT015270 EMBL:M15762 EMBL:M15763
EMBL:M15764 PIR:A43742 RefSeq:NP_001162699.1 RefSeq:NP_511078.2
RefSeq:NP_727228.1 RefSeq:NP_996368.1 RefSeq:NP_996369.1
RefSeq:NP_996370.1 UniGene:Dm.7909 ProteinModelPortal:P13709
SMR:P13709 DIP:DIP-19376N IntAct:P13709 MINT:MINT-925900
STRING:P13709 PaxDb:P13709 EnsemblMetazoa:FBtr0071119 GeneID:31722
KEGG:dme:Dmel_CG2252 CTD:31722 FlyBase:FBgn0004656
HOGENOM:HOG000264002 InParanoid:P13709 OMA:RYEPPVE
OrthoDB:EOG40P2P2 PhylomeDB:P13709 ChiTaRS:fs(1)h GenomeRNAi:31722
NextBio:775009 Bgee:P13709 GermOnline:CG2252 Uniprot:P13709
Length = 2038
Score = 131 (51.2 bits), Expect = 0.00022, P = 0.00022
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I++P+DM I +L N Y E + DF MF+N YN+P + A +L+
Sbjct: 71 PDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLE 130
Query: 556 RIVLQTKMHLREDEDSVPDVPA 577
++ LQ + ++E + V A
Sbjct: 131 KVFLQKIESMPKEELELEPVTA 152
Score = 116 (45.9 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+KP+D+ + K+ +Y+ E AD +F N KYN PD H D +++ R
Sbjct: 516 DYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPD-H---DVVAMGR 571
Query: 557 IVLQTKMHLREDEDSVPDVPAA 578
LQ +R ++PD P A
Sbjct: 572 -KLQDVFEMRYA--NIPDEPVA 590
Score = 111 (44.1 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 301 QLLPSKK-RYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGS 359
Q + +KK P+Y+ +I P+D+ TI +R+++ Y S + +D M N +N+PG
Sbjct: 61 QPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGE 120
Query: 360 QIYKDAKALKKLVQTK-----KMEIEQGKFTPAGKSERIRS 395
+ A+ L+K+ K K E+E T G ++ R+
Sbjct: 121 DVVVMAQTLEKVFLQKIESMPKEELELEPVTAKGGKKKQRA 161
Score = 62 (26.9 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 131 KKRQEPSYHEVVTNPIDFIKIQQKLKTDEY----DDLSDFQADIELLVVTN-P-IDFIKI 184
KK P YH+++ P+D I+++L+ + Y + + DF V N P D + +
Sbjct: 66 KKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVM 125
Query: 185 QQKLK 189
Q L+
Sbjct: 126 AQTLE 130
>UNIPROTKB|C9JD82 [details] [associations]
symbol:BRDT "Bromodomain testis-specific protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0006338 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 HOGENOM:HOG000231200 EMBL:AC114486
HGNC:HGNC:1105 ChiTaRS:BRDT IPI:IPI00640477
ProteinModelPortal:C9JD82 SMR:C9JD82 STRING:C9JD82
Ensembl:ENST00000423434 ArrayExpress:C9JD82 Bgee:C9JD82
Uniprot:C9JD82
Length = 176
Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K + P+YY +I P+DL TI +R+++ YA + +D M N +N+PG I A
Sbjct: 60 KLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 366 KALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAA 410
+AL+KL K ++ Q + G ERI+ +G Q A+++A
Sbjct: 120 QALEKLFMQKLSQMPQEEQV-VGVKERIK----KGTQQNIAVSSA 159
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I+ P+D+ I +L Y E + DF MF N YN+P I A +L+
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 556 RIVLQTKMHLREDEDSV 572
++ +Q + ++E V
Sbjct: 124 KLFMQKLSQMPQEEQVV 140
>POMBASE|SPAC1952.05 [details] [associations]
symbol:gcn5 "SAGA complex histone acetyltransferase
catalytic subunit Gcn5" species:4896 "Schizosaccharomyces pombe"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IGI] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=EXP;IMP] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0010484 "H3
histone acetyltransferase activity" evidence=IDA] [GO:0043966
"histone H3 acetylation" evidence=IDA] [GO:0071276 "cellular
response to cadmium ion" evidence=IMP] [GO:0071585 "detoxification
of cadmium ion" evidence=IMP] InterPro:IPR000182 InterPro:IPR001487
Pfam:PF00439 Pfam:PF13508 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51186 SMART:SM00297 PomBase:SPAC1952.05 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0071276 GO:GO:0071585
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0000124
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0007131 GO:GO:0010484 HOGENOM:HOG000192257
KO:K06062 EMBL:AB162439 PIR:T37933 RefSeq:NP_594807.1
ProteinModelPortal:Q9UUK2 SMR:Q9UUK2 IntAct:Q9UUK2 STRING:Q9UUK2
EnsemblFungi:SPAC1952.05.1 GeneID:2542513 KEGG:spo:SPAC1952.05
OMA:SVWMGYI OrthoDB:EOG412QF2 NextBio:20803566 Uniprot:Q9UUK2
Length = 454
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 36/86 (41%), Positives = 52/86 (60%)
Query: 486 FQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDS 545
F + S+ D PDYYEVI P+D+ + +LR NQYE ++E + D +FDN YN+ ++
Sbjct: 368 FMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRDAKYIFDNCRSYNDSNT 427
Query: 546 HIYKDALSLQRIVLQTKMHLREDEDS 571
YK+A L++ Q K LRE E S
Sbjct: 428 TYYKNADRLEKF-FQKK--LRETEYS 450
Score = 136 (52.9 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 30/95 (31%), Positives = 52/95 (54%)
Query: 286 MTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
M T+ + P F SK+ P+YY+VI+ P+DL T+ R+++ +Y S+ + +D
Sbjct: 354 MLFTEMQNHPSSWPFMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRDAK 413
Query: 346 LMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIE 380
+ N ++N+ + YK+A L+K Q K E E
Sbjct: 414 YIFDNCRSYNDSNTTYYKNADRLEKFFQKKLRETE 448
>UNIPROTKB|B0V072 [details] [associations]
symbol:BRD2 "Bromodomain-containing protein 2" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0005737 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 HOVERGEN:HBG004896 OrthoDB:EOG4NZTT4
HGNC:HGNC:1103 ChiTaRS:BRD2 EMBL:CR759798 IPI:IPI00893552
SMR:B0V072 Ensembl:ENST00000416727 Ensembl:ENST00000424160
Uniprot:B0V072
Length = 613
Score = 133 (51.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I++P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 556 RIVLQTKMHL-REDEDSVPDVP 576
+I LQ + +E+++ V +P
Sbjct: 171 KIFLQKVASMPQEEQELVVTIP 192
Score = 113 (44.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ Y E AD MF N KYN PD + A LQ
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 444
Query: 557 I 557
+
Sbjct: 445 V 445
Score = 100 (40.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ +I P+D+ TI RR+++ Y + + +D M N +N+P I A+ L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 370 KLVQTKKMEIEQ 381
K+ K + Q
Sbjct: 171 KIFLQKVASMPQ 182
Score = 67 (28.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 21/91 (23%), Positives = 43/91 (47%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ P+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 190 TDEYDDLSDF-QADIELLVKNAKTFYKRNSQ 219
++ Q + EL+V K +K+ ++
Sbjct: 171 KIFLQKVASMPQEEQELVVTIPKNSHKKGAK 201
>UNIPROTKB|B0V073 [details] [associations]
symbol:BRD2 "Bromodomain-containing protein 2" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0005737 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 HOGENOM:HOG000231200 HOVERGEN:HBG004896
HGNC:HGNC:1103 ChiTaRS:BRD2 EMBL:CR759798 IPI:IPI00894424
SMR:B0V073 Ensembl:ENST00000425201 Uniprot:B0V073
Length = 648
Score = 133 (51.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I++P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 556 RIVLQTKMHL-REDEDSVPDVP 576
+I LQ + +E+++ V +P
Sbjct: 171 KIFLQKVASMPQEEQELVVTIP 192
Score = 113 (44.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ Y E AD MF N KYN PD + A LQ
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 444
Query: 557 I 557
+
Sbjct: 445 V 445
Score = 100 (40.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ +I P+D+ TI RR+++ Y + + +D M N +N+P I A+ L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 370 KLVQTKKMEIEQ 381
K+ K + Q
Sbjct: 171 KIFLQKVASMPQ 182
Score = 67 (28.6 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 21/91 (23%), Positives = 43/91 (47%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ P+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 190 TDEYDDLSDF-QADIELLVKNAKTFYKRNSQ 219
++ Q + EL+V K +K+ ++
Sbjct: 171 KIFLQKVASMPQEEQELVVTIPKNSHKKGAK 201
>POMBASE|SPAC631.02 [details] [associations]
symbol:nrc1 "bromodomain protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=ISM] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] InterPro:IPR001487
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
PomBase:SPAC631.02 EMBL:CU329670 GO:GO:0006338 GO:GO:0000790
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 OrthoDB:EOG44TSHM PROSITE:PS51525 EMBL:D89157
PIR:T42517 RefSeq:NP_593620.3 ProteinModelPortal:Q9HGP4
STRING:Q9HGP4 EnsemblFungi:SPAC631.02.1 GeneID:2543426
NextBio:20804439 Uniprot:Q9HGP4
Length = 727
Score = 167 (63.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 55/244 (22%), Positives = 104/244 (42%)
Query: 130 PKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLK 189
P K+ P Y ++ NPID +Q+K + Y F D+ L+ +N + + +
Sbjct: 260 PVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMF-SNCFLYNGTESPVG 318
Query: 190 TDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQ 249
+ + F+ ++ L T Y R + R + R + S G
Sbjct: 319 VMGKNLQATFERQLKQLPSAYVTSYSRPGRRPRSMTAPKGGARTRRQAAMYSNSSSGI-- 376
Query: 250 KRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRY 309
+ +M + +D+ + C Q+ ++L +A + P ++ P+
Sbjct: 377 RETMYDLKPHRRKDAAEMKFC----QSVLKELLKK---QHEAYAYPFYKPVN--PTACGC 427
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ VI P+DL T+ ++ +YAS+ E D++LM KN FN G+ ++ K L+
Sbjct: 428 PDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLE 487
Query: 370 KLVQ 373
+ Q
Sbjct: 488 SIFQ 491
Score = 116 (45.9 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 462 KMRILYNTIKETCEPKTGRQLSHIFQRL--PSRHDYPDYYEVIRKPVDMEMIASKLRYNQ 519
+M+ + +KE + K ++ F + P+ PDY++VI+ P+D+ + +KL +N+
Sbjct: 393 EMKFCQSVLKELLK-KQHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNE 451
Query: 520 YEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDS 571
Y + AD + MF N K+N + ++ L+ I Q + D DS
Sbjct: 452 YASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLESI-FQKLWANKPDFDS 502
Score = 91 (37.1 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 37/160 (23%), Positives = 63/160 (39%)
Query: 246 GTSQKRSM--DFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLL 303
G+S++ S D + E D T+++ + + D S P
Sbjct: 204 GSSKEHSSPHDETVKKEENDKDQYPPMTKEQHKYIHAMLRQLRRGRD--SIPFRAPVD-- 259
Query: 304 PSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYK 363
P K+ P+Y +I PIDL T+ ++ G Y+S D+ LM N +N S +
Sbjct: 260 PVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFLYNGTESPVGV 319
Query: 364 DAKALKKLVQTKKMEIEQGKFTPAGK-SERIRSKRI-RGG 401
K L+ + + ++ T + R RS +GG
Sbjct: 320 MGKNLQATFERQLKQLPSAYVTSYSRPGRRPRSMTAPKGG 359
Score = 44 (20.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 16/67 (23%), Positives = 29/67 (43%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHL-- 523
+ N + E C + QLSH+ + L R P +D+ + + Y Y ++
Sbjct: 584 MQNELAEQCNYLSADQLSHVAEIL--RAALPHLRNTDEIEIDVSAMPPDVFYKVYYYVCK 641
Query: 524 -DEMVAD 529
DE+ A+
Sbjct: 642 GDEIGAE 648
>MGI|MGI:99495 [details] [associations]
symbol:Brd2 "bromodomain containing 2" species:10090 "Mus
musculus" [GO:0003682 "chromatin binding" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 MGI:MGI:99495 GO:GO:0005634
GO:GO:0005737 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
EMBL:AF100956 PROSITE:PS51525 CTD:6046 GeneTree:ENSGT00700000104261
HOVERGEN:HBG004896 KO:K08871 OMA:PVSTAMP OrthoDB:EOG4NZTT4
ChiTaRS:BRD2 EMBL:AF045462 EMBL:AB010246 EMBL:AB010247
EMBL:AB010248 EMBL:AB212273 EMBL:D89801 EMBL:AL009226 EMBL:AK147918
EMBL:AK158970 EMBL:AK168525 EMBL:AK220444 EMBL:AF318183
IPI:IPI00622700 IPI:IPI00775910 RefSeq:NP_001191902.1
RefSeq:NP_034368.2 UniGene:Mm.3444 HSSP:P25440
ProteinModelPortal:Q7JJ13 SMR:Q7JJ13 STRING:Q7JJ13
PhosphoSite:Q7JJ13 PaxDb:Q7JJ13 PRIDE:Q7JJ13
Ensembl:ENSMUST00000025193 Ensembl:ENSMUST00000095347
Ensembl:ENSMUST00000114242 GeneID:14312 KEGG:mmu:14312
UCSC:uc008cbh.1 InParanoid:Q7JJ13 NextBio:285739 Bgee:Q7JJ13
CleanEx:MM_BRD2 Genevestigator:Q7JJ13 Uniprot:Q7JJ13
Length = 798
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I++P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 556 RIVLQTKMHL-REDEDSVPDVP 576
+I LQ + +E+++ V +P
Sbjct: 170 KIFLQKVASMPQEEQELVVTIP 191
Score = 114 (45.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 28/87 (32%), Positives = 39/87 (44%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ Y E AD MF N KYN PD + A LQ
Sbjct: 384 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 443
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELL 583
V + + DE P P V L
Sbjct: 444 -VFEFRYAKMPDEPLEPG-PLPVSTAL 468
Score = 100 (40.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ +I P+D+ TI RR+++ Y + + +D M N +N+P I A+ L+
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 370 KLVQTKKMEIEQ 381
K+ K + Q
Sbjct: 170 KIFLQKVASMPQ 181
Score = 67 (28.6 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 21/91 (23%), Positives = 43/91 (47%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ P+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 190 TDEYDDLSDF-QADIELLVKNAKTFYKRNSQ 219
++ Q + EL+V K +K+ ++
Sbjct: 170 KIFLQKVASMPQEEQELVVTIPKNSHKKGAK 200
>RGD|1303324 [details] [associations]
symbol:Brd2 "bromodomain containing 2" species:10116 "Rattus
norvegicus" [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO;ISS] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 RGD:1303324 GO:GO:0005634
GO:GO:0005737 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
PROSITE:PS51525 CTD:6046 GeneTree:ENSGT00700000104261
HOGENOM:HOG000231200 HOVERGEN:HBG004896 KO:K08871 OMA:PVSTAMP
HSSP:P25440 EMBL:BX883042 IPI:IPI00422052 RefSeq:NP_997660.1
RefSeq:XP_003751971.1 UniGene:Rn.98146 ProteinModelPortal:Q6MGA9
SMR:Q6MGA9 STRING:Q6MGA9 PhosphoSite:Q6MGA9 PRIDE:Q6MGA9
Ensembl:ENSRNOT00000000535 GeneID:100909544 GeneID:294276
KEGG:rno:100909544 KEGG:rno:294276 UCSC:RGD:1303324
InParanoid:Q6MGA9 NextBio:637874 ArrayExpress:Q6MGA9
Genevestigator:Q6MGA9 Uniprot:Q6MGA9
Length = 798
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I++P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 556 RIVLQTKMHL-REDEDSVPDVP 576
+I LQ + +E+++ V +P
Sbjct: 170 KIFLQKVASMPQEEQELVVTIP 191
Score = 114 (45.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 28/87 (32%), Positives = 39/87 (44%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ Y E AD MF N KYN PD + A LQ
Sbjct: 384 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 443
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELL 583
V + + DE P P V L
Sbjct: 444 -VFEFRYAKMPDEPLEPG-PLPVSTAL 468
Score = 100 (40.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ +I P+D+ TI RR+++ Y + + +D M N +N+P I A+ L+
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 370 KLVQTKKMEIEQ 381
K+ K + Q
Sbjct: 170 KIFLQKVASMPQ 181
Score = 67 (28.6 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 21/91 (23%), Positives = 43/91 (47%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ P+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 190 TDEYDDLSDF-QADIELLVKNAKTFYKRNSQ 219
++ Q + EL+V K +K+ ++
Sbjct: 170 KIFLQKVASMPQEEQELVVTIPKNSHKKGAK 200
>UNIPROTKB|Q32S26 [details] [associations]
symbol:BRD2 "Bromodomain-containing protein 2" species:9913
"Bos taurus" [GO:0070577 "histone acetyl-lysine binding"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0005634 GO:GO:0005737
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359 PROSITE:PS51525
EMBL:AY957499 IPI:IPI00687961 RefSeq:NP_001039331.1
UniGene:Bt.33281 ProteinModelPortal:Q32S26 SMR:Q32S26 STRING:Q32S26
PRIDE:Q32S26 Ensembl:ENSBTAT00000014704 GeneID:505358
KEGG:bta:505358 CTD:6046 GeneTree:ENSGT00700000104261
HOGENOM:HOG000231200 HOVERGEN:HBG004896 InParanoid:Q32S26 KO:K08871
OMA:PVSTAMP OrthoDB:EOG4NZTT4 NextBio:20867105 Uniprot:Q32S26
Length = 803
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I++P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 556 RIVLQTKMHL-REDEDSVPDVP 576
+I LQ + +E+++ V +P
Sbjct: 171 KIFLQKVASMPQEEQELVVTIP 192
Score = 114 (45.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 28/87 (32%), Positives = 39/87 (44%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ Y E AD MF N KYN PD + A LQ
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 444
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELL 583
V + + DE P P V L
Sbjct: 445 -VFEFRYAKMPDEPLEPG-PLPVSTAL 469
Score = 100 (40.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ +I P+D+ TI RR+++ Y + + +D M N +N+P I A+ L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 370 KLVQTKKMEIEQ 381
K+ K + Q
Sbjct: 171 KIFLQKVASMPQ 182
Score = 67 (28.6 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 21/91 (23%), Positives = 43/91 (47%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ P+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 190 TDEYDDLSDF-QADIELLVKNAKTFYKRNSQ 219
++ Q + EL+V K +K+ ++
Sbjct: 171 KIFLQKVASMPQEEQELVVTIPKNSHKKGAK 201
>UNIPROTKB|Q5TJG6 [details] [associations]
symbol:BRD2 "Bromodomain-containing protein 2" species:9615
"Canis lupus familiaris" [GO:0070577 "histone acetyl-lysine
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0006334 "nucleosome
assembly" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0005737 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
PROSITE:PS51525 CTD:6046 GeneTree:ENSGT00700000104261
HOGENOM:HOG000231200 HOVERGEN:HBG004896 KO:K08871 OMA:PVSTAMP
OrthoDB:EOG4NZTT4 EMBL:AJ630365 RefSeq:NP_001041552.1
UniGene:Cfa.1287 ProteinModelPortal:Q5TJG6 SMR:Q5TJG6 PRIDE:Q5TJG6
Ensembl:ENSCAFT00000001379 Ensembl:ENSCAFT00000043351 GeneID:474868
KEGG:cfa:474868 InParanoid:Q5TJG6 NextBio:20850812 Uniprot:Q5TJG6
Length = 803
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I++P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 556 RIVLQTKMHL-REDEDSVPDVP 576
+I LQ + +E+++ V +P
Sbjct: 171 KIFLQKVASMPQEEQELVVTIP 192
Score = 114 (45.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 28/87 (32%), Positives = 39/87 (44%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ Y E AD MF N KYN PD + A LQ
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 444
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELL 583
V + + DE P P V L
Sbjct: 445 -VFEFRYAKMPDEPLEPG-PLPVSTAL 469
Score = 100 (40.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ +I P+D+ TI RR+++ Y + + +D M N +N+P I A+ L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 370 KLVQTKKMEIEQ 381
K+ K + Q
Sbjct: 171 KIFLQKVASMPQ 182
Score = 67 (28.6 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 21/91 (23%), Positives = 43/91 (47%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ P+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 190 TDEYDDLSDF-QADIELLVKNAKTFYKRNSQ 219
++ Q + EL+V K +K+ ++
Sbjct: 171 KIFLQKVASMPQEEQELVVTIPKNSHKKGAK 201
>UNIPROTKB|A5D9K6 [details] [associations]
symbol:BRD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0005634 GO:GO:0005737
GO:GO:0006357 GO:GO:0003682 GO:GO:0006334 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
CTD:6046 GeneTree:ENSGT00700000104261 HOGENOM:HOG000231200
HOVERGEN:HBG004896 KO:K08871 OMA:PVSTAMP OrthoDB:EOG4NZTT4
EMBL:CU618315 EMBL:BX324144 RefSeq:NP_001116557.1 UniGene:Ssc.20953
ProteinModelPortal:A5D9K6 SMR:A5D9K6 Ensembl:ENSSSCT00000001637
GeneID:100141307 KEGG:ssc:100141307 Uniprot:A5D9K6
Length = 803
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I++P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 556 RIVLQTKMHL-REDEDSVPDVP 576
+I LQ + +E+++ V +P
Sbjct: 171 KIFLQKVASMPQEEQELVVTIP 192
Score = 114 (45.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 28/87 (32%), Positives = 39/87 (44%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ Y E AD MF N KYN PD + A LQ
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 444
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELL 583
V + + DE P P V L
Sbjct: 445 -VFEFRYAKMPDEPLEPG-PLPVSTAL 469
Score = 100 (40.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ +I P+D+ TI RR+++ Y + + +D M N +N+P I A+ L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 370 KLVQTKKMEIEQ 381
K+ K + Q
Sbjct: 171 KIFLQKVASMPQ 182
Score = 67 (28.6 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 21/91 (23%), Positives = 43/91 (47%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ P+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 190 TDEYDDLSDF-QADIELLVKNAKTFYKRNSQ 219
++ Q + EL+V K +K+ ++
Sbjct: 171 KIFLQKVASMPQEEQELVVTIPKNSHKKGAK 201
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 171 (65.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 37/105 (35%), Positives = 59/105 (56%)
Query: 275 QNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKY 334
QNQ E++ ++ + R L E+F + P K+ YP+YY +I PI L I +R Y
Sbjct: 1514 QNQIENILGLIINYKNEHDRVLSELFLVKPPKRFYPDYYVLIKHPIALDVIKKRTASKSY 1573
Query: 335 ASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
+ + + +D+ LM NA +NE GS +Y+DA L++L K E+
Sbjct: 1574 SKIREFLEDIHLMFTNAKIYNEEGSIVYQDAAFLERLSMDKFKEL 1618
Score = 148 (57.2 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 33/94 (35%), Positives = 51/94 (54%)
Query: 480 RQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACK 539
R LS +F P + YPDYY +I+ P+ +++I + Y + E + D MF NA
Sbjct: 1533 RVLSELFLVKPPKRFYPDYYVLIKHPIALDVIKKRTASKSYSKIREFLEDIHLMFTNAKI 1592
Query: 540 YNEPDSHIYKDALSLQRIVL----QTKMHLREDE 569
YNE S +Y+DA L+R+ + + +L EDE
Sbjct: 1593 YNEEGSIVYQDAAFLERLSMDKFKELSANLSEDE 1626
Score = 48 (22.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 159 EYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNS 218
+Y D Q + E + +T ++ +K+QQ+ +Y Q + + ++
Sbjct: 23 QYGD--QVQLNPEFVKLTKFLNTLKMQQQRFQQQYQQQQQQQQQ-----QQQQQQQQQQQ 75
Query: 219 QEHRDAQELMELFHSTRNKLLNPQSHEG-TSQK 250
Q+ + Q+ L HS ++ LL Q+ +G T Q+
Sbjct: 76 QQQQQQQQQQSLNHSQQSPLL--QNAQGQTPQQ 106
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 16/81 (19%), Positives = 33/81 (40%)
Query: 244 HEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCED-LFNAVMTSTDADS---RPLHEV 299
++ T++++ E ED R T++E+ +D N ++ + + R + E
Sbjct: 1258 NKSTAEEQEAMLRALIEKEDERRQKGGTDEEEEDLDDDELNQIIARNENELVVFRKMDEE 1317
Query: 300 FQLLPSKKRYPE-YYDVIDVP 319
L YP Y ++P
Sbjct: 1318 RYLATKNAPYPSRLYTEEELP 1338
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 171 (65.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 37/105 (35%), Positives = 59/105 (56%)
Query: 275 QNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKY 334
QNQ E++ ++ + R L E+F + P K+ YP+YY +I PI L I +R Y
Sbjct: 1514 QNQIENILGLIINYKNEHDRVLSELFLVKPPKRFYPDYYVLIKHPIALDVIKKRTASKSY 1573
Query: 335 ASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
+ + + +D+ LM NA +NE GS +Y+DA L++L K E+
Sbjct: 1574 SKIREFLEDIHLMFTNAKIYNEEGSIVYQDAAFLERLSMDKFKEL 1618
Score = 148 (57.2 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 33/94 (35%), Positives = 51/94 (54%)
Query: 480 RQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACK 539
R LS +F P + YPDYY +I+ P+ +++I + Y + E + D MF NA
Sbjct: 1533 RVLSELFLVKPPKRFYPDYYVLIKHPIALDVIKKRTASKSYSKIREFLEDIHLMFTNAKI 1592
Query: 540 YNEPDSHIYKDALSLQRIVL----QTKMHLREDE 569
YNE S +Y+DA L+R+ + + +L EDE
Sbjct: 1593 YNEEGSIVYQDAAFLERLSMDKFKELSANLSEDE 1626
Score = 48 (22.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 159 EYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNS 218
+Y D Q + E + +T ++ +K+QQ+ +Y Q + + ++
Sbjct: 23 QYGD--QVQLNPEFVKLTKFLNTLKMQQQRFQQQYQQQQQQQQQ-----QQQQQQQQQQQ 75
Query: 219 QEHRDAQELMELFHSTRNKLLNPQSHEG-TSQK 250
Q+ + Q+ L HS ++ LL Q+ +G T Q+
Sbjct: 76 QQQQQQQQQQSLNHSQQSPLL--QNAQGQTPQQ 106
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 16/81 (19%), Positives = 33/81 (40%)
Query: 244 HEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCED-LFNAVMTSTDADS---RPLHEV 299
++ T++++ E ED R T++E+ +D N ++ + + R + E
Sbjct: 1258 NKSTAEEQEAMLRALIEKEDERRQKGGTDEEEEDLDDDELNQIIARNENELVVFRKMDEE 1317
Query: 300 FQLLPSKKRYPE-YYDVIDVP 319
L YP Y ++P
Sbjct: 1318 RYLATKNAPYPSRLYTEEELP 1338
>SGD|S000004391 [details] [associations]
symbol:BDF1 "Protein involved in transcription initiation at
TATA promoters" species:4932 "Saccharomyces cerevisiae" [GO:0000812
"Swr1 complex" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0031452
"negative regulation of heterochromatin assembly" evidence=IGI;IMP]
[GO:0090054 "regulation of chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0034401
"regulation of transcription by chromatin organization"
evidence=IMP] [GO:0001047 "core promoter binding" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0009301 "snRNA
transcription" evidence=IMP] [GO:0001094 "TFIID-class transcription
factor binding" evidence=IDA;IPI] [GO:1900051 "positive regulation
of histone exchange" evidence=IMP] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 SGD:S000004391
GO:GO:0006281 GO:GO:0003682 EMBL:BK006945 GO:GO:0030435
GO:GO:0006338 GO:GO:0000812 GO:GO:0001047 GO:GO:0001094
GO:GO:0034401 EMBL:U19729 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
KO:K11684 OrthoDB:EOG44TSHM PROSITE:PS51525 EMBL:Z18944 EMBL:U18116
EMBL:L13469 PIR:S55955 RefSeq:NP_013503.1 ProteinModelPortal:P35817
SMR:P35817 DIP:DIP-1624N IntAct:P35817 MINT:MINT-407031
STRING:P35817 PaxDb:P35817 PeptideAtlas:P35817 PRIDE:P35817
EnsemblFungi:YLR399C GeneID:851115 KEGG:sce:YLR399C CYGD:YLR399c
GeneTree:ENSGT00700000104285 HOGENOM:HOG000248774 OMA:QETEIEL
NextBio:967833 Genevestigator:P35817 GermOnline:YLR399C
GO:GO:0031452 GO:GO:1900051 GO:GO:0090054 GO:GO:0031938
GO:GO:0009301 Uniprot:P35817
Length = 686
Score = 163 (62.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 60/258 (23%), Positives = 108/258 (41%)
Query: 125 PFIRI--PKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFI 182
PF++ P K P Y + P+D I++KL Y+ D L+V N I F
Sbjct: 172 PFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMV-NNSIKFN 230
Query: 183 KIQQKLKTDEYDDLSDFQAD-IELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNP 241
+ + + F+ + + K+A + + AQE + +
Sbjct: 231 GPNAGISQMARNIQASFEKHMLNMPAKDAPPVIAKGRRS--SAQEDAPIV------IRRA 282
Query: 242 QSHEGTSQKRSMDFMMASET---EDSRDSSICTEDEQNQCEDLFNAVMTSTDAD-SRPLH 297
Q+H G KR++ + + E + S + C+ + +M A + P
Sbjct: 283 QTHNGRP-KRTIHPPKSKDIYPYESKKPKSKRLQQAMKFCQSVLKELMAKKHASYNYPFL 341
Query: 298 EVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEP 357
E P P Y+D + P+DL TIA+++ D +Y ++ D E+D+ L+ KN TFN
Sbjct: 342 EPVD--PVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPD 399
Query: 358 GSQIYKDAKALKKLVQTK 375
G+ + L+++ +K
Sbjct: 400 GTIVNMMGHRLEEVFNSK 417
>UNIPROTKB|P25440 [details] [associations]
symbol:BRD2 "Bromodomain-containing protein 2" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=IMP] [GO:0007283 "spermatogenesis" evidence=TAS]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 GO:GO:0005737 EMBL:CH471081
GO:GO:0007283 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
PROSITE:PS51525 CTD:6046 HOVERGEN:HBG004896 KO:K08871 OMA:PVSTAMP
OrthoDB:EOG4NZTT4 EMBL:X62083 EMBL:M80613 EMBL:X96670 EMBL:D42040
EMBL:BX648109 EMBL:AL645941 EMBL:AL662845 EMBL:AL805913
EMBL:AL935042 EMBL:BX005422 EMBL:BX908719 EMBL:CR936909 EMBL:Z96104
EMBL:BC063840 IPI:IPI00014414 IPI:IPI00440502 PIR:A56619
RefSeq:NP_001106653.1 RefSeq:NP_001186384.1 RefSeq:NP_001186385.1
RefSeq:NP_005095.1 UniGene:Hs.75243 PDB:1X0J PDB:2DVQ PDB:2DVR
PDB:2DVS PDB:2DVV PDB:2E3K PDB:2G4A PDB:2YDW PDB:2YEK PDB:3AQA
PDB:3ONI PDB:4A9E PDB:4A9F PDB:4A9H PDB:4A9I PDB:4A9J PDB:4A9M
PDB:4A9N PDB:4A9O PDB:4AKN PDB:4ALG PDB:4ALH PDBsum:1X0J
PDBsum:2DVQ PDBsum:2DVR PDBsum:2DVS PDBsum:2DVV PDBsum:2E3K
PDBsum:2G4A PDBsum:2YDW PDBsum:2YEK PDBsum:3AQA PDBsum:3ONI
PDBsum:4A9E PDBsum:4A9F PDBsum:4A9H PDBsum:4A9I PDBsum:4A9J
PDBsum:4A9M PDBsum:4A9N PDBsum:4A9O PDBsum:4AKN PDBsum:4ALG
PDBsum:4ALH ProteinModelPortal:P25440 SMR:P25440 IntAct:P25440
STRING:P25440 PhosphoSite:P25440 DMDM:12230989 PaxDb:P25440
PRIDE:P25440 DNASU:6046 Ensembl:ENST00000374825
Ensembl:ENST00000374831 Ensembl:ENST00000383108
Ensembl:ENST00000395287 Ensembl:ENST00000395289
Ensembl:ENST00000399527 Ensembl:ENST00000399528
Ensembl:ENST00000399529 Ensembl:ENST00000414731
Ensembl:ENST00000436979 Ensembl:ENST00000438194
Ensembl:ENST00000442863 Ensembl:ENST00000448067
Ensembl:ENST00000449085 Ensembl:ENST00000449118
Ensembl:ENST00000547286 Ensembl:ENST00000547895
Ensembl:ENST00000549126 Ensembl:ENST00000549236
Ensembl:ENST00000550142 Ensembl:ENST00000552513
Ensembl:ENST00000552587 GeneID:6046 KEGG:hsa:6046 UCSC:uc003ocn.4
GeneCards:GC06P032944 HGNC:HGNC:1103 HPA:HPA042816 MIM:601540
neXtProt:NX_P25440 PharmGKB:PA25414 PhylomeDB:P25440
BindingDB:P25440 ChEMBL:CHEMBL1293289 ChiTaRS:BRD2
EvolutionaryTrace:P25440 GenomeRNAi:6046 NextBio:23557
ArrayExpress:P25440 Bgee:P25440 CleanEx:HS_BRD2
Genevestigator:P25440 GermOnline:ENSG00000204256 Uniprot:P25440
Length = 801
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I++P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 556 RIVLQTKMHL-REDEDSVPDVP 576
+I LQ + +E+++ V +P
Sbjct: 171 KIFLQKVASMPQEEQELVVTIP 192
Score = 113 (44.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
DY+++I+ P+D+ + K+ Y E AD MF N KYN PD + A LQ
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 444
Query: 557 I 557
+
Sbjct: 445 V 445
Score = 100 (40.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ +I P+D+ TI RR+++ Y + + +D M N +N+P I A+ L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 370 KLVQTKKMEIEQ 381
K+ K + Q
Sbjct: 171 KIFLQKVASMPQ 182
Score = 67 (28.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 21/91 (23%), Positives = 43/91 (47%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-----VVTNPIDFIKIQ-QKLK 189
P YH+++ P+D I+++L+ + Y S+ D + + P D I + Q L+
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 190 TDEYDDLSDF-QADIELLVKNAKTFYKRNSQ 219
++ Q + EL+V K +K+ ++
Sbjct: 171 KIFLQKVASMPQEEQELVVTIPKNSHKKGAK 201
>UNIPROTKB|C9J1F7 [details] [associations]
symbol:BRDT "Bromodomain testis-specific protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0006338 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 EMBL:AC114486 HGNC:HGNC:1105 ChiTaRS:BRDT
IPI:IPI00878644 SMR:C9J1F7 STRING:C9J1F7 Ensembl:ENST00000427104
Ensembl:ENST00000448194 HOGENOM:HOG000213765 Uniprot:C9J1F7
Length = 155
Score = 137 (53.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K + P+YY +I P+DL TI +R+++ YA + +D M N +N+PG I A
Sbjct: 60 KLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 366 KALKKLVQTKKMEIEQGKFTPAGKSERIR 394
+AL+KL K ++ Q + G ERI+
Sbjct: 120 QALEKLFMQKLSQMPQEEQV-VGVKERIK 147
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I+ P+D+ I +L Y E + DF MF N YN+P I A +L+
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 556 RIVLQTKMHLREDEDSV 572
++ +Q + ++E V
Sbjct: 124 KLFMQKLSQMPQEEQVV 140
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 162 (62.1 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 35/98 (35%), Positives = 54/98 (55%)
Query: 475 EPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMF 534
E + GR+LS IF PS+ YPDYY +I+ PV + I + + Y L E + DF +F
Sbjct: 1565 ENEAGRKLSDIFLSKPSKALYPDYYMIIKYPVAFDNINTHIETLAYNSLKETLQDFHLIF 1624
Query: 535 DNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSV 572
NA YN S +Y+D+L L+++V + + D +
Sbjct: 1625 SNARIYNTEGSVVYEDSLELEKVVTKKYCEIMGDNSQL 1662
Score = 152 (58.6 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 272 EDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQD 331
E Q DL++ + + R L ++F PSK YP+YY +I P+ I I+
Sbjct: 1548 EKVAKQALDLYHFALNYENEAGRKLSDIFLSKPSKALYPDYYMIIKYPVAFDNINTHIET 1607
Query: 332 GKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
Y SL + +D L+ NA +N GS +Y+D+ L+K+V K EI
Sbjct: 1608 LAYNSLKETLQDFHLIFSNARIYNTEGSVVYEDSLELEKVVTKKYCEI 1655
Score = 54 (24.1 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 26/105 (24%), Positives = 48/105 (45%)
Query: 104 MQQIYDV-IRNFKKEDGALLCDPFIRIPKKRQE------PSYHEVVTNPIDFIKIQQKLK 156
+ Q D I + ++ A L D R K +Q+ S+ + + +D + + K+K
Sbjct: 671 LDQTKDTRITHLLRQTNAFL-DSLTRAVKDQQKYTKEMIDSHIKEASEEVDDLSMVPKMK 729
Query: 157 TDEYDDLSDFQADIELLVVTNPI-DFIKIQQKLKTDEYDDLSDFQ 200
+EYDD D ++++ V + I + IK Q + L D+Q
Sbjct: 730 DEEYDD-DDDNSNVDYYNVAHRIKEDIKKQPSILVG--GTLKDYQ 771
>UNIPROTKB|F7DRV9 [details] [associations]
symbol:brdt "Bromodomain testis-specific protein"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0001207 "histone
displacement" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] [GO:0007141 "male meiosis
I" evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0043484 "regulation of RNA splicing" evidence=ISS] [GO:0051039
"positive regulation of transcription during meiosis" evidence=ISS]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISS]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 GO:GO:0030154 GO:GO:0007283
GO:GO:0006351 GO:GO:0016568 GO:GO:0043484 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577 InterPro:IPR018359
GO:GO:0051039 PROSITE:PS51525 GO:GO:0007141
GeneTree:ENSGT00700000104261 GO:GO:0001207 EMBL:AAMC01026645
EMBL:AAMC01026646 EMBL:AAMC01026647 EMBL:AAMC01026648
Ensembl:ENSXETT00000049781 Uniprot:F7DRV9
Length = 933
Score = 129 (50.5 bits), Expect = 0.00015, P = 0.00015
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY++I+ P+D+ I +L YN Y + + DF MF N YN+P I + L+
Sbjct: 65 PDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVVMSQELE 124
Query: 556 RIVLQTKMHLREDE 569
++ ++ + +E
Sbjct: 125 KVFMEKIAEMPHEE 138
Score = 112 (44.5 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 305 SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKD 364
+K P+YY +I P+DL TI +R++ Y+ D +D M N +N+PG I
Sbjct: 60 AKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVVM 119
Query: 365 AKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITA 409
++ L+K+ K E+ + + R RI+ +SA+ A
Sbjct: 120 SQELEKVFMEKIAEMPHEEIELSVVGNRGVKSRIK----ISAVAA 160
Score = 110 (43.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 34/173 (19%), Positives = 78/173 (45%)
Query: 236 NKLLNPQSHEGTSQKRSMDFMMASE-TEDSRDSSICTEDEQNQCEDLFNAVMTSTDAD-S 293
NK+L+ +++ ++D + + + IC ++ C ++ N +M+ A+ +
Sbjct: 246 NKILSGTEKTRSAETSAVDLPDSQHHIHFIKSNQIC--EQLKHCNNILNEMMSKKHAEYA 303
Query: 294 RPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACT 353
P ++ ++P+ + D I P+DL TI ++++G Y D D+ LM N+
Sbjct: 304 WPFYKT--VIPTSLL--DCSDAIKHPMDLATIRDKMENGLYKDTQDFASDVRLMFMNSYK 359
Query: 354 FNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSA 406
+N P +++ A+ ++ + + +I ER ++ S S+
Sbjct: 360 YNPPDNEVVNMARKMQDVFEGMFAKIPDDPLATQSMVERYKTSTEESSSSSSS 412
Score = 98 (39.6 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 26/93 (27%), Positives = 43/93 (46%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
D + I+ P+D+ I K+ Y+ + +D MF N+ KYN PD+ + A +Q
Sbjct: 317 DCSDAIKHPMDLATIRDKMENGLYKDTQDFASDVRLMFMNSYKYNPPDNEVVNMARKMQD 376
Query: 557 IVLQTKMHLREDEDSVPDVPAAVQELLTSLFTS 589
+ M + +PD P A Q ++ TS
Sbjct: 377 VF--EGMFAK-----IPDDPLATQSMVERYKTS 402
Score = 67 (28.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 20/79 (25%), Positives = 41/79 (51%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEY----DDLSDFQADIELLVVTN-P-IDFIKIQQKLK 189
P Y++++ NP+D I+++L+ + Y D + DF + N P D + + Q+L+
Sbjct: 65 PDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVVMSQELE 124
Query: 190 TDEYDDLSDF-QADIELLV 207
+ +++ +IEL V
Sbjct: 125 KVFMEKIAEMPHEEIELSV 143
>UNIPROTKB|C9JDL5 [details] [associations]
symbol:BRDT "Bromodomain testis-specific protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0006338 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 HOGENOM:HOG000231200 EMBL:AC114486
HGNC:HGNC:1105 ChiTaRS:BRDT IPI:IPI00639955
ProteinModelPortal:C9JDL5 SMR:C9JDL5 STRING:C9JDL5
Ensembl:ENST00000440509 ArrayExpress:C9JDL5 Bgee:C9JDL5
Uniprot:C9JDL5
Length = 200
Score = 141 (54.7 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
K + P+YY +I P+DL TI +R+++ YA + +D M N +N+PG I A
Sbjct: 60 KLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 366 KALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQSLSAITAA 410
+AL+KL K ++ Q + G ERI+ +G Q A+++A
Sbjct: 120 QALEKLFMQKLSQMPQEEQV-VGVKERIK----KGTQQNIAVSSA 159
Score = 130 (50.8 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I+ P+D+ I +L Y E + DF MF N YN+P I A +L+
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 556 RIVLQTKMHLREDEDSV 572
++ +Q + ++E V
Sbjct: 124 KLFMQKLSQMPQEEQVV 140
>UNIPROTKB|P21675 [details] [associations]
symbol:TAF1 "Transcription initiation factor TFIID subunit
1" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0046777 "protein
autophosphorylation" evidence=IDA;TAS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0005669 "transcription factor
TFIID complex" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0006367 "transcription initiation from
RNA polymerase II promoter" evidence=TAS] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISS]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=ISS] [GO:0043565 "sequence-specific
DNA binding" evidence=ISS] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=ISS] [GO:0002039 "p53 binding" evidence=IPI] [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IC] [GO:0070577 "histone acetyl-lysine
binding" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0051123 "RNA polymerase II transcriptional preinitiation
complex assembly" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0018105 "peptidyl-serine
phosphorylation" evidence=IDA] [GO:0017025 "TBP-class protein
binding" evidence=IPI] [GO:0000080 "G1 phase of mitotic cell cycle"
evidence=IGI] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR001487
InterPro:IPR011177 Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503
PROSITE:PS50011 PROSITE:PS50014 SMART:SM00297 GO:GO:0005524
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032 GO:GO:0004674
GO:GO:0043565 GO:GO:0045944 GO:GO:0046777 GO:GO:0018105
GO:GO:0006974 PROSITE:PS50118 GO:GO:0003713 GO:GO:0018107
GO:GO:0006368 GO:GO:0032436 PDB:3AAD PDBsum:3AAD Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0071339
GO:GO:0070577 InterPro:IPR018359 GO:GO:0000080 GO:GO:0000117
Reactome:REACT_1788 GO:GO:0004402 GO:GO:0005669 GO:GO:0060261
GO:GO:0051123 KO:K03125 InterPro:IPR022591 Pfam:PF12157
Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
HOVERGEN:HBG050223 OrthoDB:EOG4K3KVC CTD:6872 EMBL:D90359
EMBL:X07024 EMBL:AY623109 EMBL:AB209316 EMBL:AJ549247 EMBL:AJ549248
EMBL:AJ549249 EMBL:AJ549250 EMBL:AJ555148 EMBL:AJ555149
EMBL:AM711894 IPI:IPI00009891 IPI:IPI00645793 IPI:IPI00828032
IPI:IPI00939191 PIR:A40262 RefSeq:NP_004597.2 RefSeq:NP_620278.1
UniGene:Hs.158560 PDB:1EQF PDB:3UV4 PDB:3UV5 PDBsum:1EQF
PDBsum:3UV4 PDBsum:3UV5 ProteinModelPortal:P21675 SMR:P21675
DIP:DIP-147N DIP:DIP-24198N IntAct:P21675 MINT:MINT-1211825
STRING:P21675 PhosphoSite:P21675 DMDM:115942 PaxDb:P21675
PRIDE:P21675 Ensembl:ENST00000276072 Ensembl:ENST00000373790
Ensembl:ENST00000449580 GeneID:6872 KEGG:hsa:6872 UCSC:uc004dzt.4
UCSC:uc004dzu.4 UCSC:uc004dzv.4 GeneCards:GC0XP070586
HGNC:HGNC:11535 HPA:CAB016283 HPA:HPA001075 MIM:313650 MIM:314250
neXtProt:NX_P21675 Orphanet:53351 PharmGKB:PA36310 OMA:DEFYYPK
EvolutionaryTrace:P21675 GenomeRNAi:6872 NextBio:26827
ArrayExpress:P21675 Bgee:P21675 Genevestigator:P21675
GermOnline:ENSG00000147133 Uniprot:P21675
Length = 1872
Score = 128 (50.1 bits), Expect = 0.00043, P = 0.00043
Identities = 63/263 (23%), Positives = 112/263 (42%)
Query: 127 IRIPKKRQEPSYHEVVTNPI--DFI----KIQQKLKTDEYDDLSDFQADI--ELLVVTNP 178
++ PK++ P V + D++ K + +TD LS I ++ + N
Sbjct: 1343 LKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNT 1402
Query: 179 IDF-IKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
F + K+ D Y ++ D++ L +N + + +E R+ EL+ +T N
Sbjct: 1403 YPFHTPVNAKVVKDYYKIITR-PMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYN- 1460
Query: 238 LLNPQSHEGTSQKRSMDFMMASETEDSRD---------SSICTEDEQNQCEDLFNAVMTS 288
P+ H T +SM + + ++ D + + +D+Q + + ++T
Sbjct: 1461 --GPK-HSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQ 1517
Query: 289 ---TDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
DS P H +KK P+YY VI P+DL TI + I KY S D+
Sbjct: 1518 KMMAVPDSWPFHHPV----NKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVN 1573
Query: 346 LMTKNACTFNEPGSQIYKDAKAL 368
L+ N+ +N P SQ K A+ +
Sbjct: 1574 LILANSVKYNGPESQYTKTAQEI 1596
Score = 115 (45.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY+VI P+D+E I + ++Y+ + + D + N+ KYN P+S K A +
Sbjct: 1538 PDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIV 1597
Query: 556 RIVLQTKM----HLRE-DEDSVPDVPAAVQEL-LTSL 586
+ QT HL + ++D AA++E L SL
Sbjct: 1598 NVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESL 1634
Score = 100 (40.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 283 NAVMTSTDADSRPLHEVFQL-LP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
++++ S D R L + P + K +YY +I P+DL+T+ ++ Y S +
Sbjct: 1386 SSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEF 1445
Query: 341 EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIE 380
+ L L+ KN+ T+N P + + ++++ L K E E
Sbjct: 1446 REHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1485
>UNIPROTKB|B1Q2X3 [details] [associations]
symbol:N-TAF1 "TAF1 RNA polymerase II, TATA box binding
protein (TBP)-associated factor, neuron specific isoform"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005669 "transcription factor TFIID complex" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR011177
Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006352 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0005669 EMBL:AL590762 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 HOGENOM:HOG000020066 HOVERGEN:HBG050223
UniGene:Hs.158560 HGNC:HGNC:11535 EMBL:AL590763 EMBL:AB300418
IPI:IPI00149098 SMR:B1Q2X3 STRING:B1Q2X3 Ensembl:ENST00000423759
Uniprot:B1Q2X3
Length = 1895
Score = 128 (50.1 bits), Expect = 0.00043, P = 0.00043
Identities = 63/263 (23%), Positives = 112/263 (42%)
Query: 127 IRIPKKRQEPSYHEVVTNPI--DFI----KIQQKLKTDEYDDLSDFQADI--ELLVVTNP 178
++ PK++ P V + D++ K + +TD LS I ++ + N
Sbjct: 1364 LKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNT 1423
Query: 179 IDF-IKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
F + K+ D Y ++ D++ L +N + + +E R+ EL+ +T N
Sbjct: 1424 YPFHTPVNAKVVKDYYKIITR-PMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYN- 1481
Query: 238 LLNPQSHEGTSQKRSMDFMMASETEDSRD---------SSICTEDEQNQCEDLFNAVMTS 288
P+ H T +SM + + ++ D + + +D+Q + + ++T
Sbjct: 1482 --GPK-HSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQ 1538
Query: 289 ---TDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
DS P H +KK P+YY VI P+DL TI + I KY S D+
Sbjct: 1539 KMMAVPDSWPFHHPV----NKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVN 1594
Query: 346 LMTKNACTFNEPGSQIYKDAKAL 368
L+ N+ +N P SQ K A+ +
Sbjct: 1595 LILANSVKYNGPESQYTKTAQEI 1617
Score = 115 (45.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY+VI P+D+E I + ++Y+ + + D + N+ KYN P+S K A +
Sbjct: 1559 PDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIV 1618
Query: 556 RIVLQTKM----HLRE-DEDSVPDVPAAVQEL-LTSL 586
+ QT HL + ++D AA++E L SL
Sbjct: 1619 NVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESL 1655
Score = 100 (40.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 283 NAVMTSTDADSRPLHEVFQL-LP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
++++ S D R L + P + K +YY +I P+DL+T+ ++ Y S +
Sbjct: 1407 SSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEF 1466
Query: 341 EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIE 380
+ L L+ KN+ T+N P + + ++++ L K E E
Sbjct: 1467 REHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1506
>UNIPROTKB|J9NZ21 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 OMA:DEFYYPK EMBL:AAEX03026487
Ensembl:ENSCAFT00000043925 Uniprot:J9NZ21
Length = 1926
Score = 115 (45.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY+VI P+D+E I + ++Y+ + + D + N+ KYN P+S K A +
Sbjct: 1559 PDYYKVIISPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIV 1618
Query: 556 RIVLQTKM----HLRE-DEDSVPDVPAAVQEL-LTSL 586
+ QT HL + ++D AA++E L SL
Sbjct: 1619 NVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESL 1655
Score = 100 (40.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 283 NAVMTSTDADSRPLHEVFQL-LP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
++++ S D R L + P + K +YY +I P+DL+T+ ++ Y S +
Sbjct: 1407 SSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEF 1466
Query: 341 EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIE 380
+ L L+ KN+ T+N P + + ++++ L K E E
Sbjct: 1467 REHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1506
>UNIPROTKB|Q8IZX4 [details] [associations]
symbol:TAF1L "Transcription initiation factor TFIID subunit
1-like" species:9606 "Homo sapiens" [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004402 "histone
acetyltransferase activity" evidence=ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007140 "male meiosis" evidence=IEP] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0070577 "histone acetyl-lysine
binding" evidence=IDA] [GO:0016573 "histone acetylation"
evidence=ISS] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0045893 GO:GO:0003677 GO:GO:0004674 GO:GO:0006352
GO:GO:0006357 GO:GO:0007140 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
GO:GO:0004402 GO:GO:0005669 KO:K03125 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 EMBL:AF390562 IPI:IPI00100867 RefSeq:NP_722516.1
UniGene:Hs.591086 PDB:3HMH PDBsum:3HMH ProteinModelPortal:Q8IZX4
SMR:Q8IZX4 IntAct:Q8IZX4 STRING:Q8IZX4 PhosphoSite:Q8IZX4
DMDM:57013082 PaxDb:Q8IZX4 PRIDE:Q8IZX4 Ensembl:ENST00000242310
GeneID:138474 KEGG:hsa:138474 UCSC:uc003zrg.1 CTD:138474
GeneCards:GC09M032619 H-InvDB:HIX0169078 HGNC:HGNC:18056 MIM:607798
neXtProt:NX_Q8IZX4 PharmGKB:PA134947802 HOGENOM:HOG000020066
HOVERGEN:HBG050223 InParanoid:Q8IZX4 OMA:VIREEPQ OrthoDB:EOG4K3KVC
PhylomeDB:Q8IZX4 EvolutionaryTrace:Q8IZX4 GenomeRNAi:138474
NextBio:83796 CleanEx:HS_TAF1L Genevestigator:Q8IZX4
GermOnline:ENSG00000122728 Uniprot:Q8IZX4
Length = 1826
Score = 132 (51.5 bits), Expect = 0.00015, P = 0.00015
Identities = 63/263 (23%), Positives = 112/263 (42%)
Query: 127 IRIPKKRQEPSYHEVVTNPI--DFIKIQQKL----KTDEYDDLSDFQADI--ELLVVTNP 178
++ PK++ P V + D++ I K +TD LS I ++ + N
Sbjct: 1362 LKFPKQQLPPKKKRRVGTTVHCDYLNIPHKSIHRRRTDPMVTLSSILESIINDMRDLPNT 1421
Query: 179 IDF-IKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
F + K+ D Y ++ D++ L +N + + +E R+ EL+ +T N
Sbjct: 1422 HPFHTPVNAKVVKDYYKIITR-PMDLQTLRENVRKCLYPSREEFREHLELIVKNSATYN- 1479
Query: 238 LLNPQSHEGTSQKRSMDFMMASETEDSRD---------SSICTEDEQNQCEDLFNAVMTS 288
P+ H T +SM + + ++ D + + +D+Q + + ++T
Sbjct: 1480 --GPK-HSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQ 1536
Query: 289 ---TDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
DS P H +KK P+YY +I P+DL TI + I KY S D+
Sbjct: 1537 KMMAVPDSWPFHHPV----NKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVN 1592
Query: 346 LMTKNACTFNEPGSQIYKDAKAL 368
L+ N+ +N P SQ K A+ +
Sbjct: 1593 LILANSVKYNGPESQYTKTAQEI 1615
Score = 116 (45.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 32/97 (32%), Positives = 50/97 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY++I PVD+E I + ++Y+ + + D + N+ KYN P+S K A +
Sbjct: 1557 PDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIV 1616
Query: 556 RIVLQT----KMHLRE-DEDSVPDVPAAVQEL-LTSL 586
I QT HL + ++D AA++E L SL
Sbjct: 1617 NICYQTITEYDEHLTQLEKDICTAKEAALEEAELESL 1653
Score = 98 (39.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 283 NAVMTSTDADSRPLHEV--FQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
++++ S D R L F + K +YY +I P+DL+T+ ++ Y S +
Sbjct: 1405 SSILESIINDMRDLPNTHPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKCLYPSREEF 1464
Query: 341 EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIE 380
+ L L+ KN+ T+N P + + ++++ L K E E
Sbjct: 1465 REHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1504
>WB|WBGene00007256 [details] [associations]
symbol:swsn-9 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] InterPro:IPR001487
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0009792 GO:GO:0040010 GO:GO:0002119 GO:GO:0010171
GO:GO:0000003 Gene3D:1.20.920.10 SUPFAM:SSF47370 KO:K11723
InterPro:IPR021900 Pfam:PF12024 GeneTree:ENSGT00530000063939
HSSP:Q03330 EMBL:Z71258 GeneID:172461 KEGG:cel:CELE_C01H6.7
UCSC:C01H6.7 CTD:172461 HOGENOM:HOG000280704 NextBio:875611
PIR:T18845 RefSeq:NP_492041.1 ProteinModelPortal:Q17581 SMR:Q17581
DIP:DIP-25642N IntAct:Q17581 MINT:MINT-1123143 STRING:Q17581
EnsemblMetazoa:C01H6.7a.1 EnsemblMetazoa:C01H6.7a.2
WormBase:C01H6.7a InParanoid:Q17581 OMA:YLRFLFH ArrayExpress:Q17581
Uniprot:Q17581
Length = 636
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 300 FQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGS 359
F + PS P+Y D+I P+DL+TI I+DGKYASL M++D L+ NA +N+P +
Sbjct: 174 FPVTPSMA--PDYRDIIKTPMDLQTIRENIEDGKYASLPAMKEDCELIVSNAFQYNQPNT 231
Query: 360 QIYKDAKALKKLV 372
Y AK L L+
Sbjct: 232 VFYLAAKRLSNLI 244
>UNIPROTKB|C9JCJ2 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0000776 "kinetochore" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] InterPro:IPR001487 GO:GO:0007507 GO:GO:0000776
GO:GO:0003682 GO:GO:0001890 Gene3D:1.20.920.10 EMBL:AC104446
HGNC:HGNC:30064 ChiTaRS:PBRM1 EMBL:AC112215 IPI:IPI00918010
ProteinModelPortal:C9JCJ2 SMR:C9JCJ2 STRING:C9JCJ2
Ensembl:ENST00000450271 ArrayExpress:C9JCJ2 Bgee:C9JCJ2
Uniprot:C9JCJ2
Length = 87
Score = 126 (49.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 98 IDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEV 141
+DP ++Y+ IR++K E G LLC+ FIR PK+R +P Y+EV
Sbjct: 44 VDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEV 87
>UNIPROTKB|Q8WWQ0 [details] [associations]
symbol:PHIP "PH-interacting protein" species:9606 "Homo
sapiens" [GO:0006606 "protein import into nucleus" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0033138 "positive regulation of
peptidyl-serine phosphorylation" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005158 "insulin receptor binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008286 "insulin
receptor signaling pathway" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0001932 "regulation of
protein phosphorylation" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0043568 "positive regulation of insulin-like growth factor
receptor signaling pathway" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007010 "cytoskeleton
organization" evidence=IMP] [GO:0022604 "regulation of cell
morphogenesis" evidence=IMP] [GO:0045840 "positive regulation of
mitosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005634 GO:GO:0008286
GO:GO:0045893 GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 EMBL:CH471051
eggNOG:COG2319 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0045840
GO:GO:0001932 GO:GO:0033138 GO:GO:0043568 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 HOVERGEN:HBG108248 GO:GO:0005158 EMBL:AL450327
EMBL:AJ303102 EMBL:AL356776 EMBL:BC008909 EMBL:BC021905
EMBL:BC081569 EMBL:BC137488 EMBL:AK057039 EMBL:AK075124
EMBL:AL161957 EMBL:AF310250 IPI:IPI00291916 RefSeq:NP_060404.3
UniGene:Hs.511817 UniGene:Hs.606356 PDB:3MB3 PDBsum:3MB3
ProteinModelPortal:Q8WWQ0 SMR:Q8WWQ0 IntAct:Q8WWQ0
MINT:MINT-1422606 STRING:Q8WWQ0 PhosphoSite:Q8WWQ0 DMDM:308153472
PaxDb:Q8WWQ0 PRIDE:Q8WWQ0 Ensembl:ENST00000275034 GeneID:55023
KEGG:hsa:55023 UCSC:uc011dyp.2 CTD:55023 GeneCards:GC06M079644
H-InvDB:HIX0032894 HGNC:HGNC:15673 MIM:612870 neXtProt:NX_Q8WWQ0
PharmGKB:PA33265 InParanoid:Q8WWQ0 KO:K11797 OMA:PGTIQVN
OrthoDB:EOG41ZF90 ChiTaRS:PHIP EvolutionaryTrace:Q8WWQ0
GenomeRNAi:55023 NextBio:58406 ArrayExpress:Q8WWQ0 Bgee:Q8WWQ0
CleanEx:HS_PHIP Genevestigator:Q8WWQ0 Uniprot:Q8WWQ0
Length = 1821
Score = 154 (59.3 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 54/213 (25%), Positives = 93/213 (43%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQ-------- 225
VV P D I+Q+L+ Y +S ++ + N +TF + S + A+
Sbjct: 1199 VVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLH 1258
Query: 226 --------ELMELFHSTRNKLLNPQSHE-------GTSQKRSMDFMMASETEDSRDSSIC 270
++ L++S + K+L+ E GTS ++ D + R S
Sbjct: 1259 FIKDQTCYNIIPLYNSMKKKVLSDSEDEEKDADVPGTSTRKRKDHQPRRRLRN-RAQSYD 1317
Query: 271 TEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQ 330
+ + QCE+L N + D S P + LL YP+Y D+ID P+D T+ ++
Sbjct: 1318 IQAWKKQCEELLNLIFQCED--SEPFRQPVDLL----EYPDYRDIIDTPMDFATVRETLE 1371
Query: 331 DGKYASLGDMEKDLILMTKNACTFN-EPGSQIY 362
G Y S ++ KD+ L+ N+ + S+IY
Sbjct: 1372 AGNYESPMELCKDVRLIFSNSKAYTPSKRSRIY 1404
Score = 111 (44.1 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 29/102 (28%), Positives = 46/102 (45%)
Query: 271 TEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQ 330
T +CE + + D + F + YP Y V+ P DL TI +R++
Sbjct: 1158 TNPRDEECERIVAGINQLMTLD---IASAFVAPVDLQAYPMYCTVVAYPTDLSTIKQRLE 1214
Query: 331 DGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLV 372
+ Y + + ++ + N TFNEPGS I K AK + L+
Sbjct: 1215 NRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLL 1256
Score = 83 (34.3 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPD-SHIYKDAL 552
+YPDY ++I P+D + L YE E+ D +F N+ Y S IY +L
Sbjct: 1349 EYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSL 1408
Query: 553 SL 554
L
Sbjct: 1409 RL 1410
Score = 38 (18.4 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 11/61 (18%), Positives = 26/61 (42%)
Query: 190 TDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQ 249
+D D SD+ AD + ++ K K +++ + + E + K + + + +
Sbjct: 846 SDYSSDYSDWTADAGINLQPPKKVPKNKTKKAESSSDEEEESEKQKQKQIKKEKKKVNEE 905
Query: 250 K 250
K
Sbjct: 906 K 906
>UNIPROTKB|Q60544 [details] [associations]
symbol:TAF1 "Transcription initiation factor TFIID subunit
1" species:10036 "Mesocricetus auratus" [GO:0000080 "G1 phase of
mitotic cell cycle" evidence=IMP] [GO:0004402 "histone
acetyltransferase activity" evidence=ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=ISS] [GO:0016573
"histone acetylation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50011 PROSITE:PS50014
SMART:SM00297 GO:GO:0005524 GO:GO:0003677 GO:GO:0004674
GO:GO:0045944 GO:GO:0006352 PROSITE:PS50118 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0071339 InterPro:IPR018359
GO:GO:0000080 GO:GO:0004402 GO:GO:0005669 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 HOVERGEN:HBG050223 EMBL:D26114 PIR:I48155
HSSP:P21675 ProteinModelPortal:Q60544 SMR:Q60544 PRIDE:Q60544
Uniprot:Q60544
Length = 1865
Score = 107 (42.7 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY+VI P+D+E I + ++Y+ + + D + N+ KYN +S K A +
Sbjct: 1533 PDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGSESQYTKTAQEIV 1592
Query: 556 RIVLQTKM----HLRE-DEDSVPDVPAAVQEL-LTSL 586
+ QT HL + ++D AA++E L SL
Sbjct: 1593 NVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESL 1629
Score = 100 (40.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 283 NAVMTSTDADSRPLHEVFQL-LP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
++++ S D R L + P + K +YY +I P+DL+T+ ++ Y S +
Sbjct: 1381 SSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEF 1440
Query: 341 EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIE 380
+ L L+ KN+ T+N P + + ++++ L K E E
Sbjct: 1441 REHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1480
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 163 (62.4 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 34/101 (33%), Positives = 59/101 (58%)
Query: 271 TEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQ 330
+E+EQ + +++A+ D + R ++F LPSK+ YP+YY I PID++TI RI
Sbjct: 2543 SENEQKYLQ-IWDAIRADQDEEGRKRSDIFVKLPSKRDYPDYYITIKEPIDMKTIKERIV 2601
Query: 331 DGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKL 371
K+++ + M NA +N+ GS++++DA L+ L
Sbjct: 2602 GAKFSNPLSFAASVNSMFYNAQIYNQSGSEVFEDAVYLQNL 2642
Score = 163 (62.4 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 34/97 (35%), Positives = 58/97 (59%)
Query: 461 QKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQY 520
QK +++ I+ + + GR+ S IF +LPS+ DYPDYY I++P+DM+ I ++ ++
Sbjct: 2547 QKYLQIWDAIRAD-QDEEGRKRSDIFVKLPSKRDYPDYYITIKEPIDMKTIKERIVGAKF 2605
Query: 521 EHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRI 557
+ A MF NA YN+ S +++DA+ LQ +
Sbjct: 2606 SNPLSFAASVNSMFYNAQIYNQSGSEVFEDAVYLQNL 2642
Score = 47 (21.6 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 215 KRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE 274
++ EH Q+ + H + + L PQ + + Q+ + +SE S + + E
Sbjct: 1017 QQQQPEHLQQQQQQQQEHLQQPENLQPQPQQQSQQQPEQ--VQSSEQTQSMQAQ--QQPE 1072
Query: 275 QNQ 277
QNQ
Sbjct: 1073 QNQ 1075
Score = 42 (19.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 240 NPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQ 277
N +S+ +K D M ET + ++ T+ + N+
Sbjct: 2181 NNKSNRSDRKKMLEDLMTQDETAEMEKQTVPTDSQINE 2218
Score = 41 (19.5 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 375 KKMEIEQGKFTPAGK 389
++MEI+Q K+ AGK
Sbjct: 2236 ERMEIDQKKWDEAGK 2250
Score = 39 (18.8 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 237 KLLNPQSHEGTSQKRSMDFMMASETEDSRD--SSICTEDEQNQCEDLFNAVMTSTDAD 292
K+ N + TS + D +M +++ D S E + N +D A T+ D D
Sbjct: 1573 KITNDNTTTTTSASSNTDVIMKNDSGQHTDKNSKEIQEKKDNDNKDQSKA--TTIDGD 1628
Score = 38 (18.4 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 11/78 (14%), Positives = 31/78 (39%)
Query: 185 QQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSH 244
QQ+ + ++ Q + + + F + +Q Q + + +N+ N +
Sbjct: 517 QQQQQQQQHQQQHQHQQNQQFQQPQHQHFNQNQNQNQNQNQNQNQNQNQNQNQNQNQNQN 576
Query: 245 EGTSQKRSMDFMMASETE 262
+ +Q ++ M A + +
Sbjct: 577 QNQNQNQNQQQMKAQQPQ 594
Score = 37 (18.1 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 10/63 (15%), Positives = 25/63 (39%)
Query: 215 KRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE 274
++ Q+ + Q + H + PQ H+ +Q ++ + +++ +
Sbjct: 514 QQQQQQQQQQQHQQQHQHQQNQQFQQPQ-HQHFNQNQNQNQNQNQNQNQNQNQNQNQNQN 572
Query: 275 QNQ 277
QNQ
Sbjct: 573 QNQ 575
>RGD|1564964 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10116 "Rattus norvegicus" [GO:0001932 "regulation of
protein phosphorylation" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006606 "protein import into nucleus"
evidence=IEA;ISO] [GO:0007010 "cytoskeleton organization"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA;ISO] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA;ISO] [GO:0010800 "positive
regulation of peptidyl-threonine phosphorylation" evidence=IEA;ISO]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA;ISO]
[GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IEA;ISO] [GO:0040008 "regulation of
growth" evidence=IEA;ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA;ISO] [GO:0043568 "positive
regulation of insulin-like growth factor receptor signaling
pathway" evidence=ISO] [GO:0045840 "positive regulation of mitosis"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA;ISO]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 RGD:1564964 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 GO:GO:0008284 GO:GO:0045944 GO:GO:0010800
GO:GO:0006606 GO:GO:0040008 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 IPI:IPI00911360
Ensembl:ENSRNOT00000011864 Uniprot:F1M3B3
Length = 1196
Score = 151 (58.2 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 53/213 (24%), Positives = 92/213 (43%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQ-------- 225
VV P D I+Q+L+ Y S ++ + N +TF + S + A+
Sbjct: 573 VVAYPTDLSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLH 632
Query: 226 --------ELMELFHSTRNKLLNPQSHE-------GTSQKRSMDFMMASETEDSRDSSIC 270
++ L++S + K+L+ E GTS ++ D + R S
Sbjct: 633 FIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADVPGTSTRKRKDHQPRRRLRN-RAQSYD 691
Query: 271 TEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQ 330
+ + QC++L N + D S P + LL YP+Y D+ID P+D T+ ++
Sbjct: 692 IQAWRKQCQELLNLIFQCED--SEPFRQPVDLL----EYPDYRDIIDTPMDFATVRETLE 745
Query: 331 DGKYASLGDMEKDLILMTKNACTFN-EPGSQIY 362
G Y S ++ KD+ L+ N+ + S+IY
Sbjct: 746 AGNYESPMELCKDVRLIFSNSKAYTPSKRSRIY 778
Score = 109 (43.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
YP Y V+ P DL TI +R+++ Y + ++ + N TFNEPGS I K AK +
Sbjct: 567 YPMYCTVVAYPTDLSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFV 626
Query: 369 KKLV 372
L+
Sbjct: 627 TDLL 630
Score = 83 (34.3 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPD-SHIYKDAL 552
+YPDY ++I P+D + L YE E+ D +F N+ Y S IY +L
Sbjct: 723 EYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSL 782
Query: 553 SL 554
L
Sbjct: 783 RL 784
Score = 40 (19.1 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 11/61 (18%), Positives = 27/61 (44%)
Query: 190 TDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQ 249
+D D SD+ AD + ++ K K +++ + + E + + K + + + +
Sbjct: 220 SDYSSDYSDWTADAGINLQPPKKVPKHKTKKQDSSSDEEEESENQKQKHIKKERKKANEE 279
Query: 250 K 250
K
Sbjct: 280 K 280
>UNIPROTKB|E2QSZ4 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
Ensembl:ENSCAFT00000027104 Uniprot:E2QSZ4
Length = 1872
Score = 106 (42.4 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNE-PDSHIYKDALSL 554
PDYY+VI P+D+E I + ++Y+ + + D + N+ KYN P+S K A +
Sbjct: 1538 PDYYKVIISPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNVGPESQYTKTAQEI 1597
Query: 555 QRIVLQTKM----HLRE-DEDSVPDVPAAVQEL-LTSL 586
+ QT HL + ++D AA++E L SL
Sbjct: 1598 VNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESL 1635
Score = 100 (40.3 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 283 NAVMTSTDADSRPLHEVFQL-LP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
++++ S D R L + P + K +YY +I P+DL+T+ ++ Y S +
Sbjct: 1386 SSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEF 1445
Query: 341 EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIE 380
+ L L+ KN+ T+N P + + ++++ L K E E
Sbjct: 1446 REHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1485
>UNIPROTKB|F6UPV2 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 Ensembl:ENSCAFT00000027104
EMBL:AAEX03026487 Uniprot:F6UPV2
Length = 1893
Score = 106 (42.4 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNE-PDSHIYKDALSL 554
PDYY+VI P+D+E I + ++Y+ + + D + N+ KYN P+S K A +
Sbjct: 1559 PDYYKVIISPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNVGPESQYTKTAQEI 1618
Query: 555 QRIVLQTKM----HLRE-DEDSVPDVPAAVQEL-LTSL 586
+ QT HL + ++D AA++E L SL
Sbjct: 1619 VNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESL 1656
Score = 100 (40.3 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 283 NAVMTSTDADSRPLHEVFQL-LP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
++++ S D R L + P + K +YY +I P+DL+T+ ++ Y S +
Sbjct: 1407 SSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEF 1466
Query: 341 EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIE 380
+ L L+ KN+ T+N P + + ++++ L K E E
Sbjct: 1467 REHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1506
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 158 (60.7 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 37/113 (32%), Positives = 60/113 (53%)
Query: 439 AIRNAKTQGVIFFFFGVTAASLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDY 498
A + KT+ F +++MR + + P+T IF++LPS+ DYPDY
Sbjct: 1238 AAKKTKTKSKSLGIFPTVEKLVEEMREQLDEVDS--HPRTS-----IFEKLPSKRDYPDY 1290
Query: 499 YEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDA 551
++VI KP+ +++I + Y+ L+E+ MF+NA YNE S +Y DA
Sbjct: 1291 FKVIEKPMAIDIILKNCKNGTYKTLEEVRQALQTMFENARFYNEEGSWVYVDA 1343
Score = 155 (59.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 290 DADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
+ DS P +F+ LPSK+ YP+Y+ VI+ P+ + I + ++G Y +L ++ + L M +
Sbjct: 1268 EVDSHPRTSIFEKLPSKRDYPDYFKVIEKPMAIDIILKNCKNGTYKTLEEVRQALQTMFE 1327
Query: 350 NACTFNEPGSQIYKDAKALKK 370
NA +NE GS +Y DA L +
Sbjct: 1328 NARFYNEEGSWVYVDADKLNE 1348
Score = 43 (20.2 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 102 DAMQQIY--DVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDE 159
D + +++ D+ +FKKED +P RI +K++ Y++ D + +Q L+ E
Sbjct: 1026 DELPKVFREDIEEHFKKEDS----EPLGRIRQKKRV--YYD------DGLTEEQFLEAVE 1073
Query: 160 YDDLS 164
D++S
Sbjct: 1074 DDNMS 1078
Score = 42 (19.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 129 IPKKRQEPSYH-EVVTNPIDFIKIQQ 153
+ K+++E + H + + + IDFIK +Q
Sbjct: 313 LEKRKKERNLHLQKINSIIDFIKERQ 338
Score = 38 (18.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 8/38 (21%), Positives = 22/38 (57%)
Query: 149 IKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQ 186
+++ ++L+ + + + ++ L + + IDFIK +Q
Sbjct: 301 VRLAEELERQQLLEKRKKERNLHLQKINSIIDFIKERQ 338
>CGD|CAL0003781 [details] [associations]
symbol:BDF1 species:5476 "Candida albicans" [GO:0000812 "Swr1
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0001094 "TFIID-class transcription factor
binding" evidence=IEA] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0090054 "regulation of chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0031452 "negative
regulation of heterochromatin assembly" evidence=IEA] [GO:0009301
"snRNA transcription" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:1900051 "positive regulation of histone exchange"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 CGD:CAL0003781
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 KO:K11684 EMBL:AACQ01000063 EMBL:AACQ01000062
RefSeq:XP_716816.1 RefSeq:XP_716876.1 ProteinModelPortal:Q5A4W8
STRING:Q5A4W8 GeneID:3641493 GeneID:3641592 KEGG:cal:CaO19.8593
KEGG:cal:CaO19.978 Uniprot:Q5A4W8
Length = 732
Score = 102 (41.0 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 36/117 (30%), Positives = 56/117 (47%)
Query: 275 QNQCEDLFNAVMT-STDADSRP-LHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDG 332
Q+Q + + N + + ++ P LH V + K P YY+ I P+DL TI R+I
Sbjct: 212 QHQAKFVLNTIKAVKRNREAVPFLHPVDTV---KLNVPFYYNYIPRPMDLSTIERKINLK 268
Query: 333 KYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIE-QGKFTPAG 388
Y + + D LM KN FN + I K A ++ Q +K+ ++ K PAG
Sbjct: 269 AYEDVSQVVDDFNLMVKNCKKFNGEAAGISKMATNIQ--AQFEKLMVKVPPKELPAG 323
Score = 101 (40.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQI 361
P Y +++ P+DL TI ++ + +Y + D EKD+ L+ KN FN G+ +
Sbjct: 423 PNYNEIVKQPMDLGTIQSKLANNEYENADDFEKDVRLVFKNCYLFNPEGTDV 474
Score = 95 (38.5 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYN 541
P+Y E++++P+D+ I SKL N+YE+ D+ D +F N +N
Sbjct: 423 PNYNEIVKQPMDLGTIQSKLANNEYENADDFEKDVRLVFKNCYLFN 468
Score = 83 (34.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 25/106 (23%), Positives = 44/106 (41%)
Query: 175 VTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHST 234
+ P+D I++K+ Y+D+S D L+VKN K F + + A + F
Sbjct: 252 IPRPMDLSTIERKINLKAYEDVSQVVDDFNLMVKNCKKFNGEAAGISKMATNIQAQFEKL 311
Query: 235 RNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCED 280
K+ + GT+ + + S T + R S+ +Q D
Sbjct: 312 MVKVPPKELPAGTNVAEATS-VATSPTTNKR-KSVAESSSSHQHRD 355
>RGD|1305902 [details] [associations]
symbol:Pcaf "p300/CBP-associated factor" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] InterPro:IPR001487
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
RGD:1305902 GO:GO:0005634 GO:GO:0008285 GO:GO:0000776 GO:GO:0032869
GO:GO:0045944 GO:GO:0003713 GO:GO:0031674 GO:GO:0005671
GO:GO:0045736 GO:GO:0016585 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 GO:GO:0004468 GO:GO:0043966 GO:GO:0004402
GO:GO:0004861 GO:GO:0018076 GO:GO:0031672 GO:GO:0042641
HOGENOM:HOG000007151 OrthoDB:EOG4F1X2G IPI:IPI00373730
EMBL:BC092639 UniGene:Rn.4126 ProteinModelPortal:Q568Z2 SMR:Q568Z2
STRING:Q568Z2 UCSC:RGD:1305902 HOVERGEN:HBG054496 InParanoid:Q568Z2
NextBio:648269 ArrayExpress:Q568Z2 Genevestigator:Q568Z2
Uniprot:Q568Z2
Length = 84
Score = 122 (48.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 492 RHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDA 551
R + P YYEVIR P+D++ ++ +LR Y +AD ++F N +YN P+S YK A
Sbjct: 6 RTEAPGYYEVIRFPMDLKTMSERLRNRYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCA 65
Query: 552 LSLQR 556
L++
Sbjct: 66 SVLEK 70
Score = 108 (43.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 304 PSKK-RYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIY 362
P K+ P YY+VI P+DL+T++ R+++ Y S DL + N +N P S+ Y
Sbjct: 3 PVKRTEAPGYYEVIRFPMDLKTMSERLRNRYYVSKKLFMADLQRVFTNCKEYNPPESEYY 62
Query: 363 KDAKALKKLVQTKKME 378
K A L+K +K E
Sbjct: 63 KCASVLEKFFFSKIKE 78
>UNIPROTKB|F1MTQ0 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:NDNGERS
GeneTree:ENSGT00700000104382 EMBL:DAAA02003179 IPI:IPI00685238
Ensembl:ENSBTAT00000018087 Uniprot:F1MTQ0
Length = 2322
Score = 164 (62.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 70/259 (27%), Positives = 112/259 (43%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELME-LFH 232
VV P D I+ +L Y LS ++ + NA+TF + S R A+++ + L
Sbjct: 1200 VVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKITDQLLK 1259
Query: 233 STRNK-LLNPQSHEGTSQKRSM--------DFMMASE----TEDSRDSSICTED--EQN- 276
+N+ +N TS+ D S D + SI T + E N
Sbjct: 1260 FIKNQDCINISELSNTSENDEQNAEDLDDSDLPKTSSGRRRVHDWKKRSIKTTNYVENNW 1319
Query: 277 --QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKY 334
QC++L N + D S P + L+ YP+Y D+ID P+D T+ ++ G Y
Sbjct: 1320 KKQCKELVNLIFQCED--SEPFRQPVDLV----EYPDYRDIIDTPMDFGTVRETLEAGNY 1373
Query: 335 ASLGDMEKDLILMTKNACTFN-EPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGK-SER 392
S + KD+ L+ NA + S+IY L L + K +I F K SE+
Sbjct: 1374 DSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKISSD-FKIGQKFSEK 1432
Query: 393 IR-SKRIRGGQSLSAITAA 410
+R S+R + Q+ + + A
Sbjct: 1433 LRRSQRFKRRQNCNRVNQA 1451
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLS 164
P Y VV P D I+ +L Y LS
Sbjct: 1195 PKYCTVVAYPTDLYTIRMRLVNRFYRRLS 1223
>UNIPROTKB|F1MF62 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045120 "pronucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] InterPro:IPR001487
InterPro:IPR011177 Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0006355 GO:GO:0003677
GO:GO:0006352 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0045120 GO:GO:0005669 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 GeneTree:ENSGT00390000012659 OMA:DEFYYPK
EMBL:DAAA02072840 IPI:IPI00715936 Ensembl:ENSBTAT00000061423
ArrayExpress:F1MF62 Uniprot:F1MF62
Length = 1882
Score = 104 (41.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 31/99 (31%), Positives = 50/99 (50%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNE--PDSHIYKDALS 553
PDYY+VI P+D+E I + ++Y+ + + D + N+ KYN P+S K A
Sbjct: 1547 PDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNVIGPESQYTKTAQE 1606
Query: 554 LQRIVLQTKM----HLRE-DEDSVPDVPAAVQEL-LTSL 586
+ + QT HL + ++D AA++E L SL
Sbjct: 1607 IVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESL 1645
Score = 100 (40.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 283 NAVMTSTDADSRPLHEVFQL-LP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
++++ S D R L + P + K +YY +I P+DL+T+ ++ Y S +
Sbjct: 1395 SSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEF 1454
Query: 341 EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIE 380
+ L L+ KN+ T+N P + + ++++ L K E E
Sbjct: 1455 REHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1494
>TAIR|locus:2151948 [details] [associations]
symbol:AT5G55040 "AT5G55040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
KO:K11723 HSSP:Q03330 EMBL:AY074282 EMBL:AY096621 IPI:IPI00526129
RefSeq:NP_001119438.1 RefSeq:NP_200315.2 UniGene:At.48079
ProteinModelPortal:Q8VY17 SMR:Q8VY17 PaxDb:Q8VY17 PRIDE:Q8VY17
EnsemblPlants:AT5G55040.1 EnsemblPlants:AT5G55040.2 GeneID:835595
KEGG:ath:AT5G55040 TAIR:At5g55040 HOGENOM:HOG000150641
InParanoid:Q8VY17 OMA:ARTIQEM PhylomeDB:Q8VY17
ProtClustDB:CLSN2708557 ArrayExpress:Q8VY17 Genevestigator:Q8VY17
Uniprot:Q8VY17
Length = 916
Score = 145 (56.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 43/206 (20%), Positives = 95/206 (46%)
Query: 191 DEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQK 250
DE DD ++ + + E+ K K N Q+ + +E E + + + H + ++
Sbjct: 104 DEEDDEAEEEEE-EVSEKRQVKKRKLNRQDEEEEEE-EEKDYDVEEEEEEEEGHADSEEE 161
Query: 251 RSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYP 310
+ S + + D S E D + + + ++ V+ + P
Sbjct: 162 DDKERKRRSASGNQCDHS----SETTPILDKKSLELILDKLQKKDIYGVYAEPVDPEELP 217
Query: 311 EYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKK 370
+Y+D+I+ P+D T+ +++ +G Y++L ++E D++L+ NA +N + YK A+ +++
Sbjct: 218 DYHDMIEHPMDFSTVRKKLANGSYSTLEELESDVLLICSNAMQYNSSDTVYYKQARTIQE 277
Query: 371 LVQTKKMEIEQGKFTPAGKSERIRSK 396
+ + +K E + K A K + K
Sbjct: 278 MGK-RKFEKARLKIKRAEKELKTDEK 302
Score = 119 (46.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALS 553
+ PDY+++I P+D + KL Y L+E+ +D + + NA +YN D+ YK A +
Sbjct: 215 ELPDYHDMIEHPMDFSTVRKKLANGSYSTLEELESDVLLICSNAMQYNSSDTVYYKQART 274
Query: 554 LQRI 557
+Q +
Sbjct: 275 IQEM 278
Score = 64 (27.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 31/146 (21%), Positives = 64/146 (43%)
Query: 183 KIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRN---KLL 239
K++Q LK ++ +D V++A Y+ +E +A+E E R + L
Sbjct: 70 KLKQVLKLNQSRARADPPVKSRARVRHASD-YEEEDEEDDEAEEEEEEVSEKRQVKKRKL 128
Query: 240 NPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTD--ADSRPL- 296
N Q E ++ D+ + E E+ + +E+E ++ +A D +++ P+
Sbjct: 129 NRQDEE-EEEEEEKDYDVEEE-EEEEEGHADSEEEDDKERKRRSASGNQCDHSSETTPIL 186
Query: 297 -HEVFQLLPSKKRYPEYYDVIDVPID 321
+ +L+ K + + Y V P+D
Sbjct: 187 DKKSLELILDKLQKKDIYGVYAEPVD 212
>MGI|MGI:1932404 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10090 "Mus musculus" [GO:0001932 "regulation of protein
phosphorylation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006606
"protein import into nucleus" evidence=IMP] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IGI;IMP] [GO:0008286
"insulin receptor signaling pathway" evidence=IDA] [GO:0010800
"positive regulation of peptidyl-threonine phosphorylation"
evidence=IDA] [GO:0022604 "regulation of cell morphogenesis"
evidence=ISO] [GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IDA] [GO:0040008 "regulation of growth"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0043568 "positive regulation of
insulin-like growth factor receptor signaling pathway"
evidence=IDA] [GO:0045840 "positive regulation of mitosis"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 MGI:MGI:1932404 GO:GO:0005634 GO:GO:0008286
GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0045944
GO:GO:0010800 GO:GO:0006606 GO:GO:0040008 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0045840 GO:GO:0033138 GO:GO:0043568
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 HOGENOM:HOG000095265 HSSP:P16649
HOVERGEN:HBG108248 OrthoDB:EOG41ZF90 EMBL:AJ303103 EMBL:AB049460
EMBL:BC049950 EMBL:AK162189 EMBL:AF310251 IPI:IPI00311490
UniGene:Mm.221688 ProteinModelPortal:Q8VDD9 SMR:Q8VDD9
IntAct:Q8VDD9 STRING:Q8VDD9 PhosphoSite:Q8VDD9 PaxDb:Q8VDD9
PRIDE:Q8VDD9 UCSC:uc009qvv.1 InParanoid:Q8VDD9 CleanEx:MM_PHIP
Genevestigator:Q8VDD9 Uniprot:Q8VDD9
Length = 1821
Score = 148 (57.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 53/213 (24%), Positives = 91/213 (42%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQ-------- 225
VV P D I+Q+L+ Y S ++ + N +TF + S + A+
Sbjct: 1199 VVAYPTDLSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLH 1258
Query: 226 --------ELMELFHSTRNKLLNPQSHE-------GTSQKRSMDFMMASETEDSRDSSIC 270
++ L++S + K+L+ E GTS ++ D + R S
Sbjct: 1259 FIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADVPGTSTRKRKDHQPRRRLRN-RAQSYD 1317
Query: 271 TEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQ 330
+ + QC++L N + D S P + LL YP+Y D+ID P+D T+ ++
Sbjct: 1318 IQAWKKQCQELLNLIFQCED--SEPFRQPVDLL----EYPDYRDIIDTPMDFATVRETLE 1371
Query: 331 DGKYASLGDMEKDLILMTKNACTFN-EPGSQIY 362
G Y S ++ KD+ L+ N + S+IY
Sbjct: 1372 AGNYESPMELCKDVRLIFSNFKAYTPSKRSRIY 1404
Score = 109 (43.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
YP Y V+ P DL TI +R+++ Y + ++ + N TFNEPGS I K AK +
Sbjct: 1193 YPMYCTVVAYPTDLSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFV 1252
Query: 369 KKLV 372
L+
Sbjct: 1253 TDLL 1256
Score = 80 (33.2 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPD-SHIYKDAL 552
+YPDY ++I P+D + L YE E+ D +F N Y S IY +L
Sbjct: 1349 EYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNFKAYTPSKRSRIYSMSL 1408
Query: 553 SL 554
L
Sbjct: 1409 RL 1410
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 11/61 (18%), Positives = 27/61 (44%)
Query: 190 TDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQ 249
+D D SD+ AD + ++ K K +++ + + E + + K + + + +
Sbjct: 846 SDYSSDYSDWTADAGINLQPPKKVPKHKTKKPESSSDEEEESENQKQKHIKKERKKANEE 905
Query: 250 K 250
K
Sbjct: 906 K 906
>DICTYBASE|DDB_G0293800 [details] [associations]
symbol:DDB_G0293800 "BRD family protein kinase
DDB_G0293800" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR001487 InterPro:IPR013069 Pfam:PF00023 Pfam:PF00439
Pfam:PF00651 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 SMART:SM00297
dictyBase:DDB_G0293800 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 PROSITE:PS51525 EMBL:AAFI02000220 HSSP:Q92793
RefSeq:XP_628948.1 ProteinModelPortal:Q54BA2
EnsemblProtists:DDB0220694 GeneID:8629425 KEGG:ddi:DDB_G0293800
InParanoid:Q54BA2 OMA:FIEWIYT Uniprot:Q54BA2
Length = 806
Score = 143 (55.4 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 43/153 (28%), Positives = 69/153 (45%)
Query: 233 STRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQ-----CEDLFNAVMT 287
ST + + S S+ S +S + S SS D N+ C+ L N +
Sbjct: 475 STTSSTPSKSSSSTPSKSTSTSSSSSSSSSSSSSSSSNYSDSMNEKNLTFCKGLINGMFK 534
Query: 288 STD--ADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
A RP+ P + P+Y+DVI P+DL TI ++ + Y+++ D D+
Sbjct: 535 KKTSLAFQRPVD------PLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADVR 588
Query: 346 LMTKNACTFNEPGSQIYKDAKALKKLVQTKKME 378
LM +NA T+N S ++K AK L K ++
Sbjct: 589 LMFENALTYNADSSPVWKHAKTLLNAFDQKFLQ 621
Score = 127 (49.8 bits), Expect = 0.00098, Sum P(3) = 0.00097
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 480 RQLSHIFQRL--PSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNA 537
++ S FQR P PDY++VI+ P+D+ I KL N Y + + AD MF+NA
Sbjct: 535 KKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADVRLMFENA 594
Query: 538 CKYNEPDSHIYKDALSL 554
YN S ++K A +L
Sbjct: 595 LTYNADSSPVWKHAKTL 611
Score = 43 (20.2 bits), Expect = 0.00098, Sum P(3) = 0.00097
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 215 KRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDE 274
K+ E+ +Q++ +LF+ +N+ G +K D M + ++S S T D+
Sbjct: 184 KKEKIENSISQDISKLFNINKNR-----EFSGVGKKEDDDNNMKIDKQESEQQS--TSDK 236
Score = 39 (18.8 bits), Expect = 0.00098, Sum P(3) = 0.00097
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 324 TIARRIQDGKYASLGDMEKD-LILMTKN------ACTFNEP--GSQIYKDAKALKKLV-Q 373
+I +++ ++LG++ +D LI M ++ TF+ S I + K+L + +
Sbjct: 355 SIIKKLPTSTRSNLGNLVRDCLITMVRSWNIFTMTKTFSTDINKSDIIEIIKSLAPFITE 414
Query: 374 TKKMEIEQGKFTPAGKSERIRSK 396
T EI+Q + A S +SK
Sbjct: 415 TPISEIKQTRTANANASNSNQSK 437
>UNIPROTKB|J3QQQ8 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC006534
EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581 ChiTaRS:BPTF
Ensembl:ENST00000581258 Uniprot:J3QQQ8
Length = 420
Score = 139 (54.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 467 YNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEM 526
Y +K +++ F +D PDYY VI++P+D+ + +++ YE L E
Sbjct: 317 YEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEF 376
Query: 527 VADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQ 560
VAD ++FDN YN DS Y+ A L+ +Q
Sbjct: 377 VADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQ 410
>UNIPROTKB|F1NXP9 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0010800 "positive regulation
of peptidyl-threonine phosphorylation" evidence=IEA] [GO:0022604
"regulation of cell morphogenesis" evidence=IEA] [GO:0033138
"positive regulation of peptidyl-serine phosphorylation"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
GO:GO:0005634 GO:GO:0008286 GO:GO:0007010 GO:GO:0043066
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
GO:GO:0045944 GO:GO:0010800 GO:GO:0006606 GO:GO:0040008
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:AADN02002461 EMBL:AADN02002458 EMBL:AADN02002459
EMBL:AADN02002460 IPI:IPI00574522 Ensembl:ENSGALT00000025610
Uniprot:F1NXP9
Length = 1818
Score = 146 (56.5 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 67/291 (23%), Positives = 119/291 (40%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDD 195
P Y VV P D I+Q+L++ Y LS ++ I+ +T
Sbjct: 1186 PMYCTVVAYPTDLSTIKQRLESRFYRRLSSLMWEVRY-----------IEHNTRT----- 1229
Query: 196 LSDFQADIELLVKNAK--TFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHE-------- 245
F +VK+AK T + + + +++ L+++ + K+L+ E
Sbjct: 1230 ---FNEPGSPIVKSAKFVTDLLLHFIKDQSCYDIILLYNAMKKKVLSDSDEEEEKDTNVP 1286
Query: 246 GTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPS 305
GTS ++ D + R S + + QC++L N + D S P + LL
Sbjct: 1287 GTSTRKRKDHQPKRRLRN-RAQSYDIQSWKKQCQELLNLIFQCED--SEPFRQPVDLL-- 1341
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFN-EPGSQIYKD 364
YP+Y D+ID P+D T+ ++ G Y S ++ KD+ L+ N+ + S+IY
Sbjct: 1342 --EYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSM 1399
Query: 365 AKALKKLVQTKKMEIEQG-----KFTPAGKSERIRSKRIRGGQSLSAITAA 410
+ L + I +F +R R KR R S++ ++
Sbjct: 1400 SLRLSAFFEEHISSILSDYKSALRFHKRNTIKRRRKKRSRSSSVSSSVASS 1450
Score = 112 (44.5 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
YP Y V+ P DL TI +R++ Y L + ++ + N TFNEPGS I K AK +
Sbjct: 1185 YPMYCTVVAYPTDLSTIKQRLESRFYRRLSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFV 1244
Query: 369 KKLV 372
L+
Sbjct: 1245 TDLL 1248
Score = 83 (34.3 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPD-SHIYKDAL 552
+YPDY ++I P+D + L YE E+ D +F N+ Y S IY +L
Sbjct: 1342 EYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSL 1401
Query: 553 SL 554
L
Sbjct: 1402 RL 1403
Score = 42 (19.8 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 157 TDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKR 216
+D D SD+ AD + + P KI KLKT + + S+ + E K K K+
Sbjct: 838 SDYSSDYSDWTADAGINL--QPPK--KIP-KLKTKKAESSSEDEEGPEKQKKQIKKERKK 892
Query: 217 NSQE 220
S+E
Sbjct: 893 GSEE 896
Score = 38 (18.4 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
Identities = 13/61 (21%), Positives = 28/61 (45%)
Query: 190 TDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQ 249
+D D SD+ AD + ++ K K +++ + E E + K + + +G+ +
Sbjct: 838 SDYSSDYSDWTADAGINLQPPKKIPKLKTKKAESSSEDEE-GPEKQKKQIKKERKKGSEE 896
Query: 250 K 250
K
Sbjct: 897 K 897
>DICTYBASE|DDB_G0274581 [details] [associations]
symbol:DDB_G0274581 "BRD group protein" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001487
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
dictyBase:DDB_G0274581 GO:GO:0005634 GO:GO:0003700
EMBL:AAFI02000012 Gene3D:1.20.920.10 SUPFAM:SSF47370 eggNOG:COG5076
KO:K11321 RefSeq:XP_643914.1 ProteinModelPortal:Q86IX6
EnsemblProtists:DDB0220686 GeneID:8619341 KEGG:ddi:DDB_G0274581
InParanoid:Q86IX6 OMA:AYIFRYP Uniprot:Q86IX6
Length = 571
Score = 140 (54.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 48/184 (26%), Positives = 86/184 (46%)
Query: 233 STRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCED--LFNAVMTSTD 290
S+ +KL Q T+ + ++++ T D + E+ Q L+ +++
Sbjct: 231 SSSSKLKRNQKQTPTTTTPAT--LISTNTNDDDEQKRREEEHQRASSKKILYTSMLKVWK 288
Query: 291 A-DSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTK 349
+S +F+ +K P+Y VI +DL T+ +++ D Y + + KD+IL+ K
Sbjct: 289 GLNSNRFAYIFRYPITKDEAPDYDSVIKHRMDLTTLKKKLDDQVYNTCSEFSKDVILIFK 348
Query: 350 NACTFNEPGSQIYKDAKALKKLVQTKKME----IEQGKFTPAGKSERIRSKRIRGGQSLS 405
NA +N+ S IY A ++KK+ + K+ME E+ + A S RS R LS
Sbjct: 349 NAMIYNQEDSDIYNMAASMKKIAE-KEMEPCFATEELLQSGAANSLGTRSNRSGSNTPLS 407
Query: 406 AITA 409
T+
Sbjct: 408 TSTS 411
Score = 128 (50.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 29/94 (30%), Positives = 50/94 (53%)
Query: 464 RILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHL 523
+ILY ++ + + + ++IF+ ++ + PDY VI+ +D+ + KL Y
Sbjct: 277 KILYTSMLKVWKGLNSNRFAYIFRYPITKDEAPDYDSVIKHRMDLTTLKKKLDDQVYNTC 336
Query: 524 DEMVADFIQMFDNACKYNEPDSHIYKDALSLQRI 557
E D I +F NA YN+ DS IY A S+++I
Sbjct: 337 SEFSKDVILIFKNAMIYNQEDSDIYNMAASMKKI 370
Score = 49 (22.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 25/132 (18%), Positives = 53/132 (40%)
Query: 146 IDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLS-DFQADIE 204
I + KIQ+ D +L + + + N ID Q K K + D + ++ ++E
Sbjct: 97 IFYDKIQENFGKDNIINLEILLRNKRIEKIKNQIDQYNKQLKEKEEIIDTIKQNYLNELE 156
Query: 205 LLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDS 264
L + + K +E +E + + K + +G + + + + T +
Sbjct: 157 LEKQLEQEREKEKEKEKEIEKEKEKEKDEEKEKEKEKEKGKGKDKAKDKEKTNTTTTTTT 216
Query: 265 RDSSICTEDEQN 276
++ TE E+N
Sbjct: 217 TITTPTTEKEKN 228
>UNIPROTKB|F1SNJ6 [details] [associations]
symbol:LOC100620590 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0042981 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0046777 GO:GO:0003682 GO:GO:0004672 GO:GO:0031647
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 EMBL:FP236752 Ensembl:ENSSSCT00000017986
Uniprot:F1SNJ6
Length = 301
Score = 134 (52.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 481 QLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLR--YNQYEHLDEMVADFIQMFDNAC 538
++S FQ P PDYY++I+ P+D+ I +L+ Y+ Y ++ VADF +F N
Sbjct: 170 EMSLAFQD-PVPLTVPDYYKIIKNPMDLSTIKKRLQEDYSMYTKPEDFVADFRLIFQNCA 228
Query: 539 KYNEPDSHIYKDALSLQ 555
++NEPDS + + L+
Sbjct: 229 EFNEPDSEVANAGIKLE 245
>UNIPROTKB|E9PE19 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC006534
EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581 ChiTaRS:BPTF
IPI:IPI00384109 PRIDE:E9PE19 Ensembl:ENST00000342579
UCSC:uc002jgh.3 ArrayExpress:E9PE19 Bgee:E9PE19 Uniprot:E9PE19
Length = 650
Score = 139 (54.0 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 467 YNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEM 526
Y +K +++ F +D PDYY VI++P+D+ + +++ YE L E
Sbjct: 537 YEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEF 596
Query: 527 VADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQ 560
VAD ++FDN YN DS Y+ A L+ +Q
Sbjct: 597 VADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQ 630
>UNIPROTKB|E1C671 [details] [associations]
symbol:E1C671 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0005634 GO:GO:0006338
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104261 EMBL:AADN02012862
IPI:IPI00588798 Ensembl:ENSGALT00000009708 OMA:ARKMEQE
Uniprot:E1C671
Length = 961
Score = 141 (54.7 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY +I+KP+D+ I +L +N Y E + DF MF N YN+P I A L+
Sbjct: 64 PDYYSIIKKPMDLSTIKKRLEHNYYTKSAECIDDFKTMFLNCYIYNKPGDDIVFMAQELE 123
Query: 556 RIVLQTKMHLREDEDSVPD 574
++ +Q + +E +PD
Sbjct: 124 KVFMQKIAQMPPEEILIPD 142
Score = 109 (43.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 32/121 (26%), Positives = 53/121 (43%)
Query: 274 EQNQCEDLFNAVMTSTDAD--SRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQD 331
+ NQ + L VM + S P H+ + P+YY +I P+DL TI +R++
Sbjct: 28 QTNQLQYLQRVVMKAMWRHNFSWPFHQPVDA--AALNLPDYYSIIKKPMDLSTIKKRLEH 85
Query: 332 GKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSE 391
Y + D M N +N+PG I A+ L+K+ K ++ + K +
Sbjct: 86 NYYTKSAECIDDFKTMFLNCYIYNKPGDDIVFMAQELEKVFMQKIAQMPPEEILIPDKGK 145
Query: 392 R 392
R
Sbjct: 146 R 146
Score = 80 (33.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/77 (31%), Positives = 34/77 (44%)
Query: 501 VIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQ 560
+ + P D+ I K+ +Y + E D MF N K N PD + A LQ V +
Sbjct: 323 ITKCPTDLGTIKKKMDNFEYRDIQEFATDVRLMFMNCYKRNSPDHEVVAMAKKLQD-VFE 381
Query: 561 TKMHLREDEDSVPDVPA 577
T H + +PD PA
Sbjct: 382 T--HFAK----IPDEPA 392
>TAIR|locus:3354973 [details] [associations]
symbol:HAG1 "histone acetyltransferase of the GNAT family
1" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008080 "N-acetyltransferase activity"
evidence=IEA] [GO:0000123 "histone acetyltransferase complex"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=ISS;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA;TAS] [GO:0009908 "flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0016573 "histone acetylation"
evidence=IDA] [GO:0010484 "H3 histone acetyltransferase activity"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0048522 "positive
regulation of cellular process" evidence=RCA] InterPro:IPR000182
InterPro:IPR001487 Pfam:PF00439 Pfam:PF00583 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51186 SMART:SM00297 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0006351
EMBL:AL138656 GO:GO:0009416 GO:GO:0009908 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
GO:GO:0010484 GO:GO:0000123 EMBL:AF037442 EMBL:AF031958
EMBL:AF338768 EMBL:AF338771 EMBL:BT008909 EMBL:BT002057
IPI:IPI00531535 PIR:T47620 RefSeq:NP_567002.1 UniGene:At.10490
HSSP:Q03330 ProteinModelPortal:Q9AR19 SMR:Q9AR19 IntAct:Q9AR19
STRING:Q9AR19 PaxDb:Q9AR19 PRIDE:Q9AR19 EnsemblPlants:AT3G54610.1
GeneID:824626 KEGG:ath:AT3G54610 TAIR:At3g54610
HOGENOM:HOG000192257 InParanoid:Q9AR19 KO:K06062 OMA:GYFVKQG
PhylomeDB:Q9AR19 ProtClustDB:CLSN2689164 Genevestigator:Q9AR19
GO:GO:0010015 Uniprot:Q9AR19
Length = 568
Score = 143 (55.4 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 486 FQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYE-HLDEMVADFIQMFDNACKYNEPD 544
F+ D PDYY++I+ P+D+++IA ++ QY LD VAD +MF+N YN PD
Sbjct: 480 FKEPVDSRDVPDYYDIIKDPIDLKVIAKRVESEQYYVTLDMFVADARRMFNNCRTYNSPD 539
Query: 545 SHIYKDALSLQ 555
+ YK A L+
Sbjct: 540 TIYYKCATRLE 550
Score = 40 (19.1 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 252 SMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDAD 292
S F +S + D+RD ++ + DE E + +A TD+D
Sbjct: 57 SSSFPPSSFSADTRDGALTSNDE---LESI-SARGADTDSD 93
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/109 (26%), Positives = 46/109 (42%)
Query: 159 EYDD--LSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQ---ADIELLVKNA--- 210
+YD L + + D +L T+ I+ Q+K + +LS+ Q IE L A
Sbjct: 359 DYDGGLLMECKIDPKL-PYTDLSSMIRQQRKAIDERIRELSNCQNVYPKIEFLKNEAGIP 417
Query: 211 -KTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMA 258
K + R+A + + TR KL N + T+QK+ M A
Sbjct: 418 RKIIKVEEIRGLREAGWTPDQWGHTRFKLFNGSADMVTNQKQLNALMRA 466
>CGD|CAL0001703 [details] [associations]
symbol:GCN5 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0000124 "SAGA
complex" evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0010484 "H3
histone acetyltransferase activity" evidence=IEA] [GO:0070577
"histone acetyl-lysine binding" evidence=IEA] InterPro:IPR000182
InterPro:IPR001487 Pfam:PF00439 Pfam:PF13508 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51186 SMART:SM00297 CGD:CAL0001703
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0035690
GO:GO:0008080 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 EMBL:AACQ01000183
EMBL:AACQ01000182 KO:K06062 RefSeq:XP_711778.1 RefSeq:XP_711796.1
ProteinModelPortal:Q59PZ5 SMR:Q59PZ5 STRING:Q59PZ5 GeneID:3646612
GeneID:3646626 KEGG:cal:CaO19.705 KEGG:cal:CaO19.8324
Uniprot:Q59PZ5
Length = 449
Score = 136 (52.9 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 282 FNAVMTS-TDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
+N ++T ++ + P F + +K+ P+YY VI+ PIDL TI +++++ Y D
Sbjct: 348 YNFMVTLFSEIQNHPSAWPFAVAVNKEEVPDYYRVIEHPIDLATIEQKLENNLYLKFTDF 407
Query: 341 EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTK 375
DL LM N +N + YK+A L+K + K
Sbjct: 408 VDDLKLMFNNCRAYNSETTTYYKNANKLEKFMNNK 442
>UNIPROTKB|Q59PZ5 [details] [associations]
symbol:GCN5 "Likely histone acetyltransferase Gcn5"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000182
InterPro:IPR001487 Pfam:PF00439 Pfam:PF13508 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51186 SMART:SM00297 CGD:CAL0001703
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0035690
GO:GO:0008080 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 EMBL:AACQ01000183
EMBL:AACQ01000182 KO:K06062 RefSeq:XP_711778.1 RefSeq:XP_711796.1
ProteinModelPortal:Q59PZ5 SMR:Q59PZ5 STRING:Q59PZ5 GeneID:3646612
GeneID:3646626 KEGG:cal:CaO19.705 KEGG:cal:CaO19.8324
Uniprot:Q59PZ5
Length = 449
Score = 136 (52.9 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 282 FNAVMTS-TDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
+N ++T ++ + P F + +K+ P+YY VI+ PIDL TI +++++ Y D
Sbjct: 348 YNFMVTLFSEIQNHPSAWPFAVAVNKEEVPDYYRVIEHPIDLATIEQKLENNLYLKFTDF 407
Query: 341 EKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTK 375
DL LM N +N + YK+A L+K + K
Sbjct: 408 VDDLKLMFNNCRAYNSETTTYYKNANKLEKFMNNK 442
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 150 (57.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 40/120 (33%), Positives = 65/120 (54%)
Query: 293 SRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNAC 352
+R + E F P K +YP+YY +I PI + I ++I +Y SL D D+ L+ +NA
Sbjct: 1263 TRSIIEPFMKPPPKSQYPDYYMIIQNPIAMDMIKKKINREEYQSLRDFRNDIGLLCQNAR 1322
Query: 353 TFNEPGSQIYKDAKALK-KLVQTKKMEIE-QGKFT----PAGKSERIRSKRIRGGQSLSA 406
T+NE GS +++DA ++ + V E+E +F PA ++ S + GG + SA
Sbjct: 1323 TYNEDGSILFQDANDIEARCVAELSKEVEAHPQFADFDGPANSNDNPVS--VAGGDTPSA 1380
Score = 132 (51.5 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 476 PKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFD 535
P T R + F + P + YPDYY +I+ P+ M+MI K+ +Y+ L + D +
Sbjct: 1261 PVT-RSIIEPFMKPPPKSQYPDYYMIIQNPIAMDMIKKKINREEYQSLRDFRNDIGLLCQ 1319
Query: 536 NACKYNEPDSHIYKDALSLQ 555
NA YNE S +++DA ++
Sbjct: 1320 NARTYNEDGSILFQDANDIE 1339
Score = 47 (21.6 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 304 PSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDL 344
P +KR + V + D R ++I + Y +L DME++L
Sbjct: 1210 PKRKRGRQAKPVETLSPDDRAALQQILNNVYQALMDMEQEL 1250
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 197 SDFQADIELLVKNAKTFYKRNSQEHRDA--QELMELFHST 234
+ F+ D++ V A F +++ E RDA + L+E T
Sbjct: 994 AQFKLDMDGKVIQAGKFDNKSTNEERDALLRTLLETAEGT 1033
Score = 41 (19.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 12/62 (19%), Positives = 26/62 (41%)
Query: 320 IDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYK--DAKALKKLVQTKKM 377
IDL + + Y + + +L + N +N S + D+ LK L++ + +
Sbjct: 253 IDLEQVREEREVALYNRINARKAELAALPANIAAWNSGQSDVATGDDSLKLKALIEYRML 312
Query: 378 EI 379
+
Sbjct: 313 NL 314
>UNIPROTKB|F1MPF7 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0033138 "positive
regulation of peptidyl-serine phosphorylation" evidence=IEA]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008284 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:DAAA02025391 IPI:IPI00686987 Ensembl:ENSBTAT00000034372
Uniprot:F1MPF7
Length = 1759
Score = 138 (53.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 58/238 (24%), Positives = 100/238 (42%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDD 195
P Y VV P D I+Q+L+ Y +S ++ I+ +T
Sbjct: 1131 PMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRY-----------IEHNTRT----- 1174
Query: 196 LSDFQADIELLVKNAK--TFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHE-------- 245
F +VK+AK T + + + ++ L++S + K+L+ E
Sbjct: 1175 ---FNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKEDADVP 1231
Query: 246 GTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPS 305
GTS ++ D + R S + + QC++L N + D S P + LL
Sbjct: 1232 GTSTRKRKDHQPRRRLRN-RAQSYDIQAWKKQCQELLNLIFQCED--SEPFRQPVDLL-- 1286
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFN-EPGSQIY 362
YP+Y D+ID P+D T+ ++ G Y S ++ KD+ L+ N+ + S+IY
Sbjct: 1287 --EYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIY 1342
Score = 110 (43.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
YP Y V+ P DL TI +R+++ Y + + ++ + N TFNEPGS I K AK +
Sbjct: 1130 YPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFV 1189
Query: 369 KKLV 372
L+
Sbjct: 1190 TDLL 1193
Score = 83 (34.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPD-SHIYKDAL 552
+YPDY ++I P+D + L YE E+ D +F N+ Y S IY +L
Sbjct: 1287 EYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSL 1346
Query: 553 SL 554
L
Sbjct: 1347 RL 1348
>UNIPROTKB|Q9NSI6 [details] [associations]
symbol:BRWD1 "Bromodomain and WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006357
GO:GO:0006351 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 EMBL:AJ238214 EMBL:AJ292465 EMBL:AJ292466
EMBL:AB080586 EMBL:AB080587 EMBL:AF064861 EMBL:AF129408
EMBL:BC064602 EMBL:AL163279 EMBL:AJ222636 EMBL:AK002177
IPI:IPI00250716 IPI:IPI00289944 IPI:IPI00746752
RefSeq:NP_001007247.1 RefSeq:NP_061836.2 RefSeq:NP_387505.1
UniGene:Hs.627139 UniGene:Hs.654740 PDB:3Q2E PDBsum:3Q2E
ProteinModelPortal:Q9NSI6 SMR:Q9NSI6 IntAct:Q9NSI6 STRING:Q9NSI6
DMDM:97535778 PaxDb:Q9NSI6 PRIDE:Q9NSI6 Ensembl:ENST00000333229
Ensembl:ENST00000341322 Ensembl:ENST00000342449
Ensembl:ENST00000380800 GeneID:54014 KEGG:hsa:54014 UCSC:uc002yxk.2
UCSC:uc021wjf.1 CTD:54014 GeneCards:GC21M040556 HGNC:HGNC:12760
HPA:HPA030945 neXtProt:NX_Q9NSI6 PharmGKB:PA134906879
HOVERGEN:HBG080933 InParanoid:Q9NSI6 KO:K11798 OMA:NDNGERS
OrthoDB:EOG470TGD PhylomeDB:Q9NSI6 ChiTaRS:BRWD1
EvolutionaryTrace:Q9NSI6 GenomeRNAi:54014 NextBio:56274
ArrayExpress:Q9NSI6 Bgee:Q9NSI6 CleanEx:HS_BRWD1
Genevestigator:Q9NSI6 GermOnline:ENSG00000185658 Uniprot:Q9NSI6
Length = 2320
Score = 152 (58.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 67/251 (26%), Positives = 105/251 (41%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELF-- 231
VV P D I+ +L Y LS ++ + NA+TF + S R A+++ +
Sbjct: 1200 VVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKITDQLLK 1259
Query: 232 -----HSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSR----DS--SICTED--EQN-- 276
H T L+ S +D +T R D SI + E N
Sbjct: 1260 FIKNQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRRRVHDGKKSIRATNYVESNWK 1319
Query: 277 -QCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYA 335
QC++L N + D S P + L+ YP+Y D+ID P+D T+ + G Y
Sbjct: 1320 KQCKELVNLIFQCED--SEPFRQPVDLV----EYPDYRDIIDTPMDFGTVRETLDAGNYD 1373
Query: 336 SLGDMEKDLILMTKNACTFN-EPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGK-SERI 393
S + KD+ L+ NA + S+IY L L + K +I F K +E++
Sbjct: 1374 SPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKISSD-FKIGQKFNEKL 1432
Query: 394 R-SKRIRGGQS 403
R S+R + Q+
Sbjct: 1433 RRSQRFKQRQN 1443
Score = 41 (19.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLS 164
P Y VV P D I+ +L Y LS
Sbjct: 1195 PKYCTVVAYPTDLYTIRMRLVNRFYRRLS 1223
>UNIPROTKB|F1LQ54 [details] [associations]
symbol:F1LQ54 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000182 InterPro:IPR001487
InterPro:IPR009464 Pfam:PF00439 Pfam:PF06466 Pfam:PF13508
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51186 SMART:SM00297
GO:GO:0008285 GO:GO:0000776 GO:GO:0032869 GO:GO:0045944
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0003713
GO:GO:0031674 GO:GO:0005671 GO:GO:0045736 GO:GO:0016585
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0004468
InterPro:IPR018359 GO:GO:0043966 GO:GO:0004402 GO:GO:0004861
GO:GO:0018076 GO:GO:0031672 GO:GO:0042641
GeneTree:ENSGT00660000095339 IPI:IPI00373730
Ensembl:ENSRNOT00000061882 ArrayExpress:F1LQ54 Uniprot:F1LQ54
Length = 688
Score = 142 (55.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LY+T+K + Q + F R + P YYEVIR P+D++ ++ +LR Y
Sbjct: 584 LYSTLKNILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLRNRYYVSKKL 643
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+AD ++F N +YN P+S YK A L++
Sbjct: 644 FMADLQRVFTNCKEYNPPESEYYKCASVLEK 674
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 361 IYKDAKALKKLVQTKKMEIEQ 381
I K + +KKL++ K+ +I +
Sbjct: 519 IKKQKEIIKKLIERKQAQIRK 539
>UNIPROTKB|Q6NVM8 [details] [associations]
symbol:brd9 "Bromodomain-containing protein 9" species:8364
"Xenopus (Silurana) tropicalis" [GO:0070577 "histone acetyl-lysine
binding" evidence=ISS] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
HOGENOM:HOG000070022 KO:K11723 InterPro:IPR021900 Pfam:PF12024
CTD:65980 HOVERGEN:HBG107536 OrthoDB:EOG4GQQ4R EMBL:BC067977
RefSeq:NP_998862.1 UniGene:Str.15268 ProteinModelPortal:Q6NVM8
SMR:Q6NVM8 GeneID:407874 KEGG:xtr:407874 Xenbase:XB-GENE-969470
InParanoid:Q6NVM8 Uniprot:Q6NVM8
Length = 596
Score = 133 (51.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 33/119 (27%), Positives = 56/119 (47%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
P Y+ +I+ P+D + K+ N+Y+ + E ADF M DNA YN P++ YK A L
Sbjct: 183 PGYFMIIKNPMDFSTMKEKISQNEYKSVTEFKADFKLMCDNAMTYNRPETVYYKLAKKLL 242
Query: 556 RI---VLQTKMHLREDEDSVPDVPAAVQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPL 611
++ + L DED+ + P + ++ + V +K F V+ D +
Sbjct: 243 HTGFKMMSKQAALLGDEDTTTEEPTP-EIIMPTAAEVVKKSKKPSKDMFRVMEEDQSSI 300
>UNIPROTKB|O15164 [details] [associations]
symbol:TRIM24 "Transcription intermediary factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0071391 "cellular response to estrogen stimulus" evidence=IDA]
[GO:0034056 "estrogen response element binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0002039 "p53 binding"
evidence=IPI] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0031647 "regulation of protein stability"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0005102 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0006366 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 EMBL:CH236950
EMBL:CH471070 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071391 MIM:188550 Orphanet:146
GO:GO:0034056 PDB:3O34 PDB:3O35 PDB:3O37 PDBsum:3O34 PDBsum:3O35
PDBsum:3O37 PDB:3O36 PDBsum:3O36 GO:GO:0070562 GO:GO:0005726
EMBL:AC013429 EMBL:AF009353 EMBL:AF119042 EMBL:AK075306
EMBL:AC008265 EMBL:BC028689 IPI:IPI00005184 IPI:IPI00184317
RefSeq:NP_003843.3 RefSeq:NP_056989.2 UniGene:Hs.490287 PDB:2YYN
PDB:3O33 PDBsum:2YYN PDBsum:3O33 ProteinModelPortal:O15164
SMR:O15164 DIP:DIP-52713N IntAct:O15164 STRING:O15164
PhosphoSite:O15164 PaxDb:O15164 PRIDE:O15164 DNASU:8805
Ensembl:ENST00000343526 Ensembl:ENST00000415680 GeneID:8805
KEGG:hsa:8805 UCSC:uc003vub.3 UCSC:uc003vuc.3 CTD:8805
GeneCards:GC07P138144 HGNC:HGNC:11812 HPA:HPA043495 MIM:603406
neXtProt:NX_O15164 PharmGKB:PA36519 HOGENOM:HOG000252971
HOVERGEN:HBG054599 InParanoid:O15164 KO:K08881 OMA:FWAQNIF
OrthoDB:EOG4P8FH9 PhylomeDB:O15164 ChiTaRS:TRIM24
EvolutionaryTrace:O15164 GenomeRNAi:8805 NextBio:33028
ArrayExpress:O15164 Bgee:O15164 CleanEx:HS_TRIM24
Genevestigator:O15164 GermOnline:ENSG00000122779 Uniprot:O15164
Length = 1050
Score = 135 (52.6 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 481 QLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLR--YNQYEHLDEMVADFIQMFDNAC 538
++S FQ P PDYY++I+ P+D+ I +L+ Y+ Y ++ VADF +F N
Sbjct: 919 EMSLAFQD-PVPLTVPDYYKIIKNPMDLSTIKKRLQEDYSMYSKPEDFVADFRLIFQNCA 977
Query: 539 KYNEPDSHIYKDALSLQ 555
++NEPDS + + L+
Sbjct: 978 EFNEPDSEVANAGIKLE 994
>UNIPROTKB|E1C6P5 [details] [associations]
symbol:BRD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR021900
Pfam:PF12024 GeneTree:ENSGT00530000063939 OMA:GSYSKKM
EMBL:AADN02027348 IPI:IPI00578157 Ensembl:ENSGALT00000020442
Uniprot:E1C6P5
Length = 605
Score = 132 (51.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 34/103 (33%), Positives = 52/103 (50%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
P Y +I+ P+D + K+ N+Y+ + E ADF M DNA YN PD+ YK A +
Sbjct: 180 PGYSMIIKHPMDFGTMKEKIAANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 239
Query: 556 R--IVLQTKMHLREDEDSVPDVPAAVQELLTSLFTSVYNHQKQ 596
+ +K L DED+V + P V E++ + +KQ
Sbjct: 240 HTGFKMMSKAALLGDEDTVVEEP--VPEVMPVQVETTKKSKKQ 280
>RGD|1309030 [details] [associations]
symbol:Brwd1 "bromodomain and WD repeat domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0007010 "cytoskeleton organization" evidence=IEA;ISO]
[GO:0008360 "regulation of cell shape" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 RGD:1309030 GO:GO:0005737 GO:GO:0007010 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 OMA:NDNGERS OrthoDB:EOG470TGD
GeneTree:ENSGT00700000104382 EMBL:AC112406 IPI:IPI00762963
Ensembl:ENSRNOT00000002231 UCSC:RGD:1309030 ArrayExpress:D4AAI9
Uniprot:D4AAI9
Length = 2303
Score = 151 (58.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 65/249 (26%), Positives = 103/249 (41%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELME-LFH 232
VV P D I+ +L Y LS ++ + NA+TF + S R A+++ + L
Sbjct: 1201 VVAYPTDLYTIRMRLVHRFYRRLSALIWEVRYIEHNARTFNEPESVIARSAKKITDQLLK 1260
Query: 233 STRNK-------LLNPQSHEGTSQKRSMDFMMASETED----------SRDSSICTEDEQ 275
+N+ L N +G S D + + SR SS D +
Sbjct: 1261 FIKNQDCTNILELCNTSDSDGDSADDLDDSDLPKTSSGRRRVHNWKRRSRGSSCIESDWR 1320
Query: 276 NQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYA 335
QC+ L ++ DS P + L+ YP+Y D+ID P+D T+ ++ G Y
Sbjct: 1321 RQCKALL--ILIFQCEDSEPFRQPVDLV----EYPDYRDIIDTPMDFGTVRETLEAGNYD 1374
Query: 336 SLGDMEKDLILMTKNACTFN-EPGSQIYKDAKALKKLVQTKKMEIE-QGKFTPAGKSERI 393
S + KD+ L+ NA + S+IY L L + K +I K K +
Sbjct: 1375 SPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKISFDFKIGQKFKEKLR 1434
Query: 394 RSKRIRGGQ 402
RS+R + Q
Sbjct: 1435 RSQRFKQRQ 1443
Score = 39 (18.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLS 164
P Y VV P D I+ +L Y LS
Sbjct: 1196 PKYCTVVAYPTDLYTIRMRLVHRFYRRLS 1224
>UNIPROTKB|J9P065 [details] [associations]
symbol:KAT2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA]
InterPro:IPR000182 InterPro:IPR001487 InterPro:IPR009464
Pfam:PF00439 Pfam:PF06466 Pfam:PF13508 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51186 SMART:SM00297 GO:GO:0005634
GO:GO:0006355 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0016573 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0004402 GeneTree:ENSGT00660000095339
EMBL:AAEX03013568 Ensembl:ENSCAFT00000043568 Uniprot:J9P065
Length = 583
Score = 138 (53.6 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LY+T+K + Q + F R + P YYEVIR P+D++ ++ +L+ Y
Sbjct: 479 LYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKKL 538
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+AD ++F N +YN P+S YK A L++
Sbjct: 539 FMADLQRVFTNCKEYNPPESEYYKCANILEK 569
Score = 38 (18.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 361 IYKDAKALKKLVQTKKMEIEQ 381
I K + +KKL++ K+ +I +
Sbjct: 414 IKKQKEIIKKLIERKQAQIRK 434
>WB|WBGene00009180 [details] [associations]
symbol:nurf-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 SMART:SM00384 GO:GO:0007275 GO:GO:0005634
GO:GO:0040010 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0000003 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 HSSP:Q8C9B9 EMBL:Z81515
PIR:T21430 PIR:T21432 PIR:T21433 PIR:T21435 RefSeq:NP_001022117.2
RefSeq:NP_001022118.2 RefSeq:NP_001022119.1 RefSeq:NP_001022120.1
RefSeq:NP_001022121.1 RefSeq:NP_001122607.1 RefSeq:NP_496994.3
RefSeq:NP_496995.3 DIP:DIP-25937N MINT:MINT-1051254 STRING:Q6BER5
PaxDb:Q6BER5 PRIDE:Q6BER5 GeneID:175098 KEGG:cel:CELE_F26H11.2
UCSC:F26H11.2a CTD:175098 WormBase:F26H11.2a WormBase:F26H11.2b
WormBase:F26H11.2c WormBase:F26H11.2d WormBase:F26H11.2e
WormBase:F26H11.2f WormBase:F26H11.2g WormBase:F26H11.2h
InParanoid:Q6BER5 OMA:RRIIRHK NextBio:886744 ArrayExpress:Q6BER5
Uniprot:Q6BER5
Length = 2194
Score = 154 (59.3 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 43/169 (25%), Positives = 82/169 (48%)
Query: 454 GVTAASLQKMRILYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIAS 513
G + S+Q R Y + E E ++S F+ +++PDY + I+KP+D+ I
Sbjct: 2023 GSSRVSVQLTRADYTHVFELLELLLEHRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITK 2082
Query: 514 KLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSVP 573
K+ +Y +L + V D QMF+NA YN + ++K A ++Q + + + +RE +
Sbjct: 2083 KVERTEYLYLSQFVNDVNQMFENAKTYNPKGNAVFKCAETMQEVFDKKLIDVREQMTARQ 2142
Query: 574 DV----PAAVQELLTSLFTSVYNHQKQCLGSFHVLNVDNKPLKRRLYTL 618
+ A Q+ ++S+ V + ++ + S + + PL L L
Sbjct: 2143 QMLLLATAQQQDPMSSIRKRVQSESQRTVDSLDIDSDQLLPLDANLMRL 2191
Score = 44 (20.5 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 167 QADIELLVVTNPIDFIKIQQKLKTDEYDDLS 197
Q +E + V +F+K QQ+LK + D L+
Sbjct: 749 QTRLERITVDQRENFMKEQQRLKKIDADALT 779
Score = 37 (18.1 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 356 EPGSQIYKDAKALKKLVQTKKMEIEQGKFTP 386
+PG + + +K T+KM ++ G+F P
Sbjct: 1443 QPGG-VKHNVILMKASDGTQKMVLKPGQFPP 1472
>ZFIN|ZDB-GENE-041111-120 [details] [associations]
symbol:brwd1 "bromodomain and WD repeat domain
containing 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 ZFIN:ZDB-GENE-041111-120 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR011047
SUPFAM:SSF50998 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 EMBL:BX088654
EMBL:CT573306 IPI:IPI00898300 Ensembl:ENSDART00000115034
Uniprot:E7F145
Length = 2008
Score = 132 (51.5 bits), Expect = 0.00017, P = 0.00017
Identities = 60/243 (24%), Positives = 107/243 (44%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQ-------E 226
V+ P D I+ +LK + Y LS D++ + +NAKTF + S+ + A+ +
Sbjct: 1031 VIAYPTDLNTIKLRLKHNFYRRLSALIWDVKHIEQNAKTFNEPRSKIAQSAKIITNVLIK 1090
Query: 227 LMELFHSTR-NKLLNPQSHEGTSQKRSMDFMMASETEDS---RDSSI---CTEDE-QNQC 278
+ H T ++ N + S MD + A T R S+ D ++ C
Sbjct: 1091 FISKLHCTDIMEIYNAVENMEYSDDEEMDDIDAPGTSAGQRLRQPSVEVVLDRDAWKDHC 1150
Query: 279 EDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLG 338
+ L + + D S P + + YP+Y ++ID P+DL T+ + +++ +Y +
Sbjct: 1151 KRLLDYMFECED--SEPFRDPVD----QSDYPDYTNIIDTPMDLGTVRQTLEEDRYENPI 1204
Query: 339 DMEKDLILMTKNACTFN-EPGSQIYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIR-SK 396
D+ KD+ L+ NA + S+IY L + +I T S ++R S+
Sbjct: 1205 DVCKDIRLIFANAKAYTPNKRSKIYSMTLRLSAFFEENIRKIISDYKTAIKSSLKLRRSQ 1264
Query: 397 RIR 399
R R
Sbjct: 1265 RCR 1267
Score = 107 (42.7 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 308 RYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKA 367
+YP Y VI P DL TI R++ Y L + D+ + +NA TFNEP S+I + AK
Sbjct: 1024 QYPTYCTVIAYPTDLNTIKLRLKHNFYRRLSALIWDVKHIEQNAKTFNEPRSKIAQSAKI 1083
Query: 368 LKKLV 372
+ ++
Sbjct: 1084 ITNVL 1088
Score = 87 (35.7 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 483 SHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNE 542
S F+ + DYPDY +I P+D+ + L ++YE+ ++ D +F NA Y
Sbjct: 1163 SEPFRDPVDQSDYPDYTNIIDTPMDLGTVRQTLEEDRYENPIDVCKDIRLIFANAKAYT- 1221
Query: 543 PD--SHIYKDALSL 554
P+ S IY L L
Sbjct: 1222 PNKRSKIYSMTLRL 1235
Score = 42 (19.8 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 162 DLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQADIE 204
D SD+ AD + V T+ + +++ + E +D D + + E
Sbjct: 686 DYSDWTADAGISVRTSDSSRRRTTRRISSSEEEDEEDDEEEEE 728
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 195 DLSDFQADIELLVKNAKTFYKRNSQEHRDAQE 226
D SD+ AD + V+ + + +R ++ ++E
Sbjct: 686 DYSDWTADAGISVRTSDSSRRRTTRRISSSEE 717
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 196 LSDFQADIELLVKNAKTFYKRNSQEHRDAQ 225
+S A+ E + +A F R +EH+D Q
Sbjct: 465 ISQQSAESEEVRHSALDFAIRQLREHQDRQ 494
>SGD|S000000285 [details] [associations]
symbol:SPT7 "Subunit of the SAGA transcriptional regulatory
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP;IDA] [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0016568 "chromatin modification"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000124 "SAGA complex"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001487 InterPro:IPR027119
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
SGD:S000000285 GO:GO:0005739 GO:GO:0006461 GO:GO:0006355
GO:GO:0005198 GO:GO:0016573 GO:GO:0006351 EMBL:BK006936
GO:GO:0000124 GO:GO:0046695 EMBL:X76294 GO:GO:0000747
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 OrthoDB:EOG4MSH6B PANTHER:PTHR22880:SF33
EMBL:L22537 EMBL:Z35950 EMBL:M87651 PIR:S41552 RefSeq:NP_009637.1
ProteinModelPortal:P35177 SMR:P35177 DIP:DIP-771N IntAct:P35177
MINT:MINT-616454 STRING:P35177 PaxDb:P35177 PeptideAtlas:P35177
EnsemblFungi:YBR081C GeneID:852373 KEGG:sce:YBR081C CYGD:YBR081c
GeneTree:ENSGT00530000069431 HOGENOM:HOG000246697 KO:K11359
OMA:PNITIRN NextBio:971161 Genevestigator:P35177 GermOnline:YBR081C
Uniprot:P35177
Length = 1332
Score = 117 (46.2 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 28/97 (28%), Positives = 50/97 (51%)
Query: 466 LYNTI-KETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLD 524
LY K E + + S F S+ + P+Y+++I+K +D+ + KL+ QY+
Sbjct: 445 LYEACEKVVLELRNYTEHSTPFLNKVSKREAPNYHQIIKKSMDLNTVLKKLKSFQYDSKQ 504
Query: 525 EMVADFIQMFDNACKYNEPDSHIYKD-ALSLQRIVLQ 560
E V D + ++ N YN SH + A+++Q+ LQ
Sbjct: 505 EFVDDIMLIWKNCLTYNSDPSHFLRGHAIAMQKKSLQ 541
Score = 68 (29.0 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 54/233 (23%), Positives = 91/233 (39%)
Query: 143 TNPIDFIKIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQAD 202
TN +K+ +KL + DL + +L+V+ + + KLK +Y + +
Sbjct: 13 TNAKALLKLTEKLFNKNFFDL--YLTSQQLVVLEYLLSISSEEDKLKAWDYF----LKGN 66
Query: 203 IELLVKNAKTFYKRNSQEHRDAQELMELFHS--TRNKLLNPQSHEGTSQKRSMDFMMASE 260
I L V+ K+F +EH A S ++ + ++ T+ S + + +E
Sbjct: 67 IALNVE--KSFPLTQEEEHHGAVSPAVDTRSDDVSSQTIKDNNNTNTNTSISNENHVENE 124
Query: 261 TEDSRDSSICTEDE-------QNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYY 313
ED D++I ED N EDLF + + L K RY +
Sbjct: 125 IEDKGDNAIANEDNFVNNDESDNVEEDLFKLDLEDLKQQISGTRFIGNL-SLKIRYVLWQ 183
Query: 314 DVID-VPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPG-SQIYKD 364
ID + D D +Y L EK+ + KN N+ G S+ +D
Sbjct: 184 CAIDYIYCDRNEFGDE-NDTEYTLLDVEEKEEEEIGKNEKPQNKEGISKFAED 235
>MGI|MGI:1890651 [details] [associations]
symbol:Brwd1 "bromodomain and WD repeat domain containing 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:1890651 GO:GO:0005634 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006357
GO:GO:0006351 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 CTD:54014 HOVERGEN:HBG080933 KO:K11798
ChiTaRS:BRWD1 EMBL:AJ292467 EMBL:AJ292468 EMBL:AC144797
EMBL:AC152502 IPI:IPI00121655 IPI:IPI01007673 RefSeq:NP_001096649.1
RefSeq:NP_660107.2 UniGene:Mm.240871 UniGene:Mm.482469
ProteinModelPortal:Q921C3 SMR:Q921C3 IntAct:Q921C3
PhosphoSite:Q921C3 PRIDE:Q921C3 Ensembl:ENSMUST00000023631
Ensembl:ENSMUST00000099502 Ensembl:ENSMUST00000113829 GeneID:93871
KEGG:mmu:93871 UCSC:uc008aci.2 UCSC:uc008ack.2
GeneTree:ENSGT00700000104382 HOGENOM:HOG000095265 InParanoid:Q921C3
NextBio:351749 Bgee:Q921C3 CleanEx:MM_BRWD1 Genevestigator:Q921C3
GermOnline:ENSMUSG00000022914 Uniprot:Q921C3
Length = 2304
Score = 147 (56.8 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 64/251 (25%), Positives = 104/251 (41%)
Query: 174 VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELME-LFH 232
VV P D I+ +L Y LS ++ + NA+TF + S R A+++ + L
Sbjct: 1201 VVAYPTDLYTIRMRLVNRFYRRLSALIWEVRYIEHNARTFNEPESVIARSAKKITDQLLK 1260
Query: 233 STRNK-------LLNPQSHEGTSQKRSMDFMMASETEDSRD----------SSICTE-DE 274
+N+ L N ++ +D +T R +S C E D
Sbjct: 1261 FIKNQDCTNISELCNTSDNDEDDSADDLDDSDLPKTSSGRRKVHNWKRRSRASGCIESDW 1320
Query: 275 QNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKY 334
+ QC+ L ++ DS P + L YP+Y D+ID P+D T+ ++ G Y
Sbjct: 1321 RRQCKALL--ILIFQCEDSEPFRQPVDL----DEYPDYRDIIDTPMDFGTVRETLEAGNY 1374
Query: 335 ASLGDMEKDLILMTKNACTFN-EPGSQIYKDAKALKKLVQTKKMEIE-QGKFTPAGKSER 392
S + KD+ L+ NA + S+IY L L + K +I K K +
Sbjct: 1375 DSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKISFDFKIGQKFKEKL 1434
Query: 393 IRSKRIRGGQS 403
RS+R + Q+
Sbjct: 1435 RRSQRFKQRQN 1445
Score = 41 (19.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 136 PSYHEVVTNPIDFIKIQQKLKTDEYDDLS 164
P Y VV P D I+ +L Y LS
Sbjct: 1196 PKYCTVVAYPTDLYTIRMRLVNRFYRRLS 1224
>UNIPROTKB|F1NS89 [details] [associations]
symbol:CLEC2D "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0005634 GO:GO:0005737
GO:GO:0006357 GO:GO:0003682 GO:GO:0006334 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00700000104261 EMBL:AADN02030117 EMBL:AADN02005827
EMBL:AADN02030118 EMBL:AADN02057230 EMBL:AADN02063216
EMBL:AADN02068885 IPI:IPI00597242 Ensembl:ENSGALT00000000212
ArrayExpress:F1NS89 Uniprot:F1NS89
Length = 783
Score = 131 (51.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+++I++P+DM I +L N Y E + DF MF N YN+P I A +L+
Sbjct: 101 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 160
Query: 556 RIVLQTKMHLREDEDSVPDVPAA 578
+I LQ + +E + VP A
Sbjct: 161 KIFLQKVAQMPPEEQEIV-VPVA 182
Score = 102 (41.0 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+Y+ +I P+D+ TI RR+++ Y + +D M N +N+P I A+ L+
Sbjct: 101 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 160
Query: 370 KLVQTKKMEI---EQGKFTPAGK-SERIRSKRIRG 400
K+ K ++ EQ P K S + + R G
Sbjct: 161 KIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAG 195
Score = 77 (32.2 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 26/78 (33%), Positives = 33/78 (42%)
Query: 514 KLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIV--LQTKMHLREDEDS 571
K+ Y E AD MF N KYN PD + A LQ + KM E +D+
Sbjct: 405 KMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMP-DEPQDA 463
Query: 572 VPDVPAAVQELLTSLFTS 589
P P+ LL +L S
Sbjct: 464 SP--PSVSAPLLGALSKS 479
>UNIPROTKB|G4N6S1 [details] [associations]
symbol:MGG_03677 "Histone acetyltransferase GCN5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000182 InterPro:IPR001487 Pfam:PF00439
Pfam:PF13508 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51186
SMART:SM00297 GO:GO:0000775 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0000124 GO:GO:0005671 GO:GO:0046695
GO:GO:0034401 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 EMBL:CM001234 GO:GO:0010484 GO:GO:0043966
GO:GO:0032968 KO:K06062 RefSeq:XP_003716207.1
ProteinModelPortal:G4N6S1 SMR:G4N6S1 EnsemblFungi:MGG_03677T0
GeneID:2677008 KEGG:mgr:MGG_03677 Uniprot:G4N6S1
Length = 400
Score = 127 (49.8 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 467 YNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEM 526
YN + Q + F ++ D DYYEVI++P+D+ + +KL +QY ++
Sbjct: 294 YNQLLHLLNDMQNHQSAWPFLVPVNKDDVADYYEVIKEPMDLSTMENKLEMDQYPTPEDF 353
Query: 527 VADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQ 560
+ D +FDN KYN + K A L++ + Q
Sbjct: 354 IRDAKLIFDNCRKYNNESTPYAKSANKLEKFMWQ 387
>FB|FBgn0020388 [details] [associations]
symbol:Gcn5 "Gcn5 ortholog" species:7227 "Drosophila
melanogaster" [GO:0004402 "histone acetyltransferase activity"
evidence=ISS;IDA;NAS] [GO:0000124 "SAGA complex" evidence=ISS;IDA]
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0043967 "histone H4
acetylation" evidence=IDA] [GO:0000123 "histone acetyltransferase
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0043966 "histone H3 acetylation" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010484 "H3 histone
acetyltransferase activity" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0010485 "H4 histone
acetyltransferase activity" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IDA] [GO:0007412 "axon target recognition"
evidence=IMP] InterPro:IPR000182 InterPro:IPR001487
InterPro:IPR009464 InterPro:IPR016376 Pfam:PF00439 Pfam:PF00583
Pfam:PF06466 PIRSF:PIRSF003048 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51186 SMART:SM00297 GO:GO:0006355 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0003682 GO:GO:0048813
GO:GO:0007517 GO:GO:0000124 GO:GO:0005700 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
GO:GO:0007412 GO:GO:0010484 GO:GO:0010485 HSSP:Q92831 EMBL:AF029776
ProteinModelPortal:O76216 SMR:O76216 IntAct:O76216
MINT:MINT-6178880 STRING:O76216 PaxDb:O76216 PRIDE:O76216
FlyBase:FBgn0020388 InParanoid:O76216 OrthoDB:EOG4X0K79
ArrayExpress:O76216 Bgee:O76216 Uniprot:O76216
Length = 813
Score = 131 (51.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 486 FQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDS 545
F R + + PDYY+ I+ P+D++ + +L+ Y+ +AD ++F N YN PD+
Sbjct: 729 FLRPVTAAEVPDYYDHIKYPMDLKTMGERLKKGYYQTRRLFMADMARIFSNCRFYNSPDT 788
Query: 546 HIYKDALSLQRIVLQTKM 563
Y+ A SL+R QTKM
Sbjct: 789 EYYRCANSLERY-FQTKM 805
>UNIPROTKB|I3LRW1 [details] [associations]
symbol:KAT2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045736 "negative
regulation of cyclin-dependent protein serine/threonine kinase
activity" evidence=IEA] [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0031674
"I band" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0018076
"N-terminal peptidyl-lysine acetylation" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0004861 "cyclin-dependent protein
serine/threonine kinase inhibitor activity" evidence=IEA]
[GO:0004468 "lysine N-acetyltransferase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] InterPro:IPR000182
InterPro:IPR001487 InterPro:IPR009464 Pfam:PF00439 Pfam:PF06466
Pfam:PF13508 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51186
SMART:SM00297 GO:GO:0008285 GO:GO:0000776 GO:GO:0032869
GO:GO:0045944 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0003713 GO:GO:0031674 GO:GO:0005671 GO:GO:0045736
GO:GO:0016585 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0004468 InterPro:IPR018359 GO:GO:0043966 GO:GO:0004402
GO:GO:0004861 GO:GO:0018076 GO:GO:0031672 GO:GO:0042641
GeneTree:ENSGT00660000095339 OMA:TISYNST EMBL:CU929971
Ensembl:ENSSSCT00000024917 Uniprot:I3LRW1
Length = 692
Score = 138 (53.6 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LY+T+K + Q + F R + P YYEVIR P+D++ ++ +L+ Y
Sbjct: 588 LYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKKL 647
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+AD ++F N +YN P+S YK A L++
Sbjct: 648 FMADLQRVFTNCKEYNPPESEYYKCANILEK 678
Score = 38 (18.4 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 361 IYKDAKALKKLVQTKKMEIEQ 381
I K + +KKL++ K+ +I +
Sbjct: 523 IKKQKEIIKKLIERKQAQIRK 543
>FB|FBgn0010355 [details] [associations]
symbol:Taf1 "TBP-associated factor 1" species:7227
"Drosophila melanogaster" [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005669 "transcription factor TFIID
complex" evidence=ISS;NAS;IDA;IPI] [GO:0005634 "nucleus"
evidence=NAS;IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0001129 "TBP-class protein binding RNA polymerase II
transcription factor activity involved in preinitiation complex
assembly" evidence=IPI] [GO:0006367 "transcription initiation from
RNA polymerase II promoter" evidence=ISS] [GO:0004672 "protein
kinase activity" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0006461 "protein complex assembly" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0051726 "regulation of cell cycle" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0035174 "histone serine kinase
activity" evidence=IDA] [GO:0000117 "regulation of transcription
involved in G2/M-phase of mitotic cell cycle" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046425 "regulation of
JAK-STAT cascade" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001487 InterPro:IPR001878
InterPro:IPR011177 InterPro:IPR017956 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50011 PROSITE:PS50014
SMART:SM00297 SMART:SM00343 SMART:SM00384 EMBL:AE014297
GO:GO:0005524 GO:GO:0022008 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0016573 GO:GO:0035174 EMBL:AE001572
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0000117 GO:GO:0046425 GO:GO:0005669
GO:GO:0060261 GO:GO:0001129 KO:K03125 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 EMBL:S61883 EMBL:BT004888 PIR:A47371
RefSeq:NP_476956.3 RefSeq:NP_996159.1 RefSeq:NP_996160.1
UniGene:Dm.7380 PDB:1TBA PDBsum:1TBA DisProt:DP00081
ProteinModelPortal:P51123 SMR:P51123 DIP:DIP-228N IntAct:P51123
MINT:MINT-788336 STRING:P51123 PaxDb:P51123
EnsemblMetazoa:FBtr0081685 GeneID:40813 KEGG:dme:Dmel_CG17603
CTD:6872 FlyBase:FBgn0010355 GeneTree:ENSGT00390000012659
InParanoid:P51123 OrthoDB:EOG4HHMH6 PhylomeDB:P51123
EvolutionaryTrace:P51123 GenomeRNAi:40813 NextBio:820715
Bgee:P51123 GermOnline:CG17603 Uniprot:P51123
Length = 2129
Score = 134 (52.2 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 41/137 (29%), Positives = 64/137 (46%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY V+ KP+D++ + +R +Y + + D Q+ DN+ YN P S Y L+ Q
Sbjct: 1505 PDYYRVVTKPMDLQTMREYIRQRRYTSREMFLEDLKQIVDNSLIYNGPQS-AY--TLAAQ 1561
Query: 556 RIVLQTKMHLREDEDSVPDVPAAVQELLTS--------LFTSVYNHQKQCLGSFHVLNVD 607
R+ L E ED + + A+ LL +F +++ KQ S+ L
Sbjct: 1562 RMFSSCFELLAEREDKLMRLEKAINPLLDDDDQVALSFIFDKLHSQIKQLPESWPFLKPV 1621
Query: 608 NKPLKRRLYTLCKCLMD 624
NK + YT+ K MD
Sbjct: 1622 NKKQVKDYYTVIKRPMD 1638
Score = 106 (42.4 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 44/165 (26%), Positives = 77/165 (46%)
Query: 227 LMELFHSTRNKLL--NPQSHEGTSQKR--SMDFMMASETEDSR---DSSICTE-DEQNQC 278
L +L N L+ PQS + +R S F + +E ED + +I D+ +Q
Sbjct: 1536 LEDLKQIVDNSLIYNGPQSAYTLAAQRMFSSCFELLAEREDKLMRLEKAINPLLDDDDQV 1595
Query: 279 EDLFNAVMTSTDADSRPLHEVFQLL-P-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYAS 336
F + + + L E + L P +KK+ +YY VI P+DL TI + I+ +Y S
Sbjct: 1596 ALSF--IFDKLHSQIKQLPESWPFLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYHS 1653
Query: 337 LGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
+ D+ L+ N +N ++ K +K + + QT+ +E +
Sbjct: 1654 RAEYLADIELIATNCEQYNGSDTRYTKFSKKILEYAQTQLIEFSE 1698
Score = 82 (33.9 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 95 RKKIDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQK 154
R++ DP + I ++I N + + PF+ ++ P Y+ VVT P+D +++
Sbjct: 1466 RRRTDPVVVLSSILEIIHNELRSMPDV--SPFLFPVSAKKVPDYYRVVTKPMDLQTMREY 1523
Query: 155 LKTDEYDDLSDFQADIELLV 174
++ Y F D++ +V
Sbjct: 1524 IRQRRYTSREMFLEDLKQIV 1543
Score = 60 (26.2 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 39/191 (20%), Positives = 73/191 (38%)
Query: 188 LKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGT 247
L TDE + + ++D+E L KN + + ++E EL R +LL E
Sbjct: 1127 LSTDEAESSASEESDLEELGKNLENMLSNKKTSTQLSREREEL---ERQELLRQLDEEHG 1183
Query: 248 SQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKK 307
S A +D + T ++ + T D + V + +
Sbjct: 1184 GPSGSGGAKGAKGKDDPGQQMLATNNQGR----ILRITRTFRGNDGKEYTRV----ETVR 1235
Query: 308 RYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKA 367
R P VID I +RT ++A+L + +K+ + K + ++ +
Sbjct: 1236 RQP----VIDAYIKIRTTKDEQFIKQFATLDEQQKEEMKREKRRIQEQLRRIKRNQERER 1291
Query: 368 LKKLVQTKKME 378
L +L Q +K++
Sbjct: 1292 LAQLAQNQKLQ 1302
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 98 IDPSDAMQQIYDVIR-NFKKEDGALLCDPFIRIPKKRQEPS--YHEVVTNPIDFIKIQQK 154
+ S+ M +D ++ K+EDGA+ K Q+ + Y ++ D + +
Sbjct: 94 VSASEGMSA-FDALKAGVKREDGAV----------KAQDDAIDYSDITELSEDCPRTPPE 142
Query: 155 LKTDEYDDLSD 165
+T YDDL D
Sbjct: 143 -ETSTYDDLED 152
>ZFIN|ZDB-GENE-050208-261 [details] [associations]
symbol:phip "pleckstrin homology domain interacting
protein" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017956 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 SMART:SM00384 ZFIN:ZDB-GENE-050208-261
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:CR759802 EMBL:CR735144 IPI:IPI00634562
Ensembl:ENSDART00000138106 Bgee:E9QJ97 Uniprot:E9QJ97
Length = 1805
Score = 128 (50.1 bits), Expect = 0.00041, P = 0.00041
Identities = 72/307 (23%), Positives = 123/307 (40%)
Query: 105 QQIYDVIRNFKKEDGALLCDPFIRIPKKRQE-PSYHEVVTNPIDFIKIQQKLKTDEYDDL 163
Q+ +IR + + PF +P Q P+Y VV D I+Q+L+ Y +
Sbjct: 1149 QECERIIRGINQLCTLDVAKPF-ELPVDLQAYPTYCTVVAYVTDLSTIRQRLENRFYRRM 1207
Query: 164 SDFQADIELL-----VVTNPIDFIKIQQKLKTDEYDDLSDFQADIELL-VKNA--KTFYK 215
S ++ + P FI K +D Q+ +++ + N+ KT +
Sbjct: 1208 SSLMWEVRYIEHNAQTFNEPGAFIVRTAKFVSDLMLQFIKDQSCTDIIPLYNSMKKTAFS 1267
Query: 216 RNSQ-EHRDAQELMEL-FHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTED 273
+S E D E E S RNK K+ + + ++ S D E
Sbjct: 1268 DSSDDEDEDEDEEHEAPCTSNRNK------------KQQQPMLRSLRSKPSSDPQAWKE- 1314
Query: 274 EQNQCEDLFNAVMTSTDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGK 333
+C +L + D S P + L YP+Y D++D P+D T+ R+ G+
Sbjct: 1315 ---RCRELLELIFQCED--SEPFRQPVDL----DEYPDYLDIVDTPMDFGTVLNRLLAGE 1365
Query: 334 YASLGDMEKDLILMTKNACTFN-EPGSQIYKDAKALKKLVQTKKMEI-EQGKFTPAGKSE 391
Y + D+ KD+ L+ N+ + S+IY + L L + I K + SE
Sbjct: 1366 YDTPMDLCKDVRLIFSNSKAYTPSKKSRIYSMSLRLSALFEEHISSILTDFKAAQSLHSE 1425
Query: 392 RIRSKRI 398
R+ +R+
Sbjct: 1426 RLTRQRL 1432
Score = 108 (43.1 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 275 QNQ-CEDLFNAVMTSTDAD-SRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDG 332
+NQ CE + + D ++P F+L + YP Y V+ DL TI +R+++
Sbjct: 1147 RNQECERIIRGINQLCTLDVAKP----FELPVDLQAYPTYCTVVAYVTDLSTIRQRLENR 1202
Query: 333 KYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLV 372
Y + + ++ + NA TFNEPG+ I + AK + L+
Sbjct: 1203 FYRRMSSLMWEVRYIEHNAQTFNEPGAFIVRTAKFVSDLM 1242
Score = 83 (34.3 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 30/137 (21%), Positives = 57/137 (41%)
Query: 483 SHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYN- 541
S F++ +YPDY +++ P+D + ++L +Y+ ++ D +F N+ Y
Sbjct: 1329 SEPFRQPVDLDEYPDYLDIVDTPMDFGTVLNRLLAGEYDTPMDLCKDVRLIFSNSKAYTP 1388
Query: 542 EPDSHIYKDALSLQRIVLQTKMHLRED---EDSVPDVPAAVQELLTSLFTSVYNHQKQCL 598
S IY +L L + + + D S+ Q L T T +++
Sbjct: 1389 SKKSRIYSMSLRLSALFEEHISSILTDFKAAQSLHSERLTRQRLHTDRLTRQSVKKRRRR 1448
Query: 599 GSFHVLNVDNKPLKRRL 615
S H + + KRR+
Sbjct: 1449 SSSHSSSASSPERKRRV 1465
Score = 41 (19.5 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 215 KRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSR 265
+ N +E + + M L S N++++ Q+ EG+S SM + E +D R
Sbjct: 610 RENCREEQLIPQ-MGLTSSGLNQVVSQQAAEGSSPLDSMIQRLQQE-QDQR 658
>UNIPROTKB|F1P124 [details] [associations]
symbol:KAT2B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0004468
"lysine N-acetyltransferase activity" evidence=IEA] [GO:0004861
"cyclin-dependent protein serine/threonine kinase inhibitor
activity" evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0018076 "N-terminal
peptidyl-lysine acetylation" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0031674 "I band" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=IEA] [GO:0042641 "actomyosin"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR000182 InterPro:IPR001487
InterPro:IPR009464 Pfam:PF00439 Pfam:PF06466 Pfam:PF13508
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51186 SMART:SM00297
GO:GO:0008285 GO:GO:0000776 GO:GO:0032869 GO:GO:0045944
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0003713
GO:GO:0031674 GO:GO:0005671 GO:GO:0045736 GO:GO:0016585
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0004468
InterPro:IPR018359 GO:GO:0043966 GO:GO:0004402 GO:GO:0004861
GO:GO:0018076 GO:GO:0031672 GO:GO:0042641
GeneTree:ENSGT00660000095339 OMA:TISYNST EMBL:AADN02001073
IPI:IPI00599058 Ensembl:ENSGALT00000018402 Uniprot:F1P124
Length = 731
Score = 138 (53.6 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LY+T+K + Q + F R + P YYEVIR P+D++ ++ +L+ Y
Sbjct: 627 LYSTLKTILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKKL 686
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKM 563
+AD ++F N +YN P+S YK A L++ TK+
Sbjct: 687 FMADLQRVFTNCREYNPPESEYYKCANILEKF-FYTKI 723
Score = 38 (18.4 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 429 PNSPLWQVYDAIRNAKT 445
PNSP+W + ++T
Sbjct: 259 PNSPIWDQDFMVSTSRT 275
Score = 38 (18.4 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 361 IYKDAKALKKLVQTKKMEIEQ 381
I K + +KKL++ K+ +I +
Sbjct: 562 IKKQKEIIKKLIERKQAQIRK 582
>UNIPROTKB|E1BSG1 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02010822
EMBL:AADN02010823 IPI:IPI00586943 Ensembl:ENSGALT00000025882
OMA:SRETNST Uniprot:E1BSG1
Length = 2293
Score = 107 (42.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKAL 368
YP+Y VI P DL TI R+ + Y + + ++ + NA TFNEPGS I + AK +
Sbjct: 1197 YPKYCTVIAYPTDLNTIRTRLANRFYRRISALVWEVRYIESNARTFNEPGSAIARAAKKI 1256
Score = 81 (33.6 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 31/100 (31%), Positives = 40/100 (40%)
Query: 468 NTIKETCEPKTGRQLSH-IFQ-------RLPSRHD-YPDYYEVIRKPVDMEMIASKLRYN 518
N E C K +L + IFQ R P D YPDY +I P+D + L
Sbjct: 1317 NGYDENCWKKQCMELVNLIFQCEDSEPFRQPVDLDQYPDYRHIIDTPMDFGTVKETLEAG 1376
Query: 519 QYEHLDEMVADFIQMFDNACKYN-EPDSHIYKDALSLQRI 557
Y+ E+ D +F NA Y S IY L L +
Sbjct: 1377 NYDTPMELCKDIRLIFSNAKSYTPNKKSKIYSMTLRLSAL 1416
>UNIPROTKB|F1PN31 [details] [associations]
symbol:KAT2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045736
"negative regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA] [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0031674
"I band" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0018076
"N-terminal peptidyl-lysine acetylation" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0004861 "cyclin-dependent protein
serine/threonine kinase inhibitor activity" evidence=IEA]
[GO:0004468 "lysine N-acetyltransferase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] InterPro:IPR000182
InterPro:IPR001487 InterPro:IPR009464 Pfam:PF00439 Pfam:PF06466
Pfam:PF13508 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51186
SMART:SM00297 GO:GO:0008285 GO:GO:0000776 GO:GO:0032869
GO:GO:0045944 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0003713 GO:GO:0031674 GO:GO:0005671 GO:GO:0045736
GO:GO:0016585 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0004468 InterPro:IPR018359 GO:GO:0043966 GO:GO:0004402
GO:GO:0004861 GO:GO:0018076 GO:GO:0031672 GO:GO:0042641
GeneTree:ENSGT00660000095339 OMA:TISYNST EMBL:AAEX03013568
Ensembl:ENSCAFT00000009358 Uniprot:F1PN31
Length = 740
Score = 138 (53.6 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LY+T+K + Q + F R + P YYEVIR P+D++ ++ +L+ Y
Sbjct: 636 LYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKKL 695
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+AD ++F N +YN P+S YK A L++
Sbjct: 696 FMADLQRVFTNCKEYNPPESEYYKCANILEK 726
Score = 38 (18.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 361 IYKDAKALKKLVQTKKMEIEQ 381
I K + +KKL++ K+ +I +
Sbjct: 571 IKKQKEIIKKLIERKQAQIRK 591
>UNIPROTKB|Q92831 [details] [associations]
symbol:KAT2B "Histone acetyltransferase KAT2B" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0031672 "A band"
evidence=IEA] [GO:0031674 "I band" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045736 "negative regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IPI] [GO:0016407 "acetyltransferase activity"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0008285
"negative regulation of cell proliferation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0018076
"N-terminal peptidyl-lysine acetylation" evidence=IDA] [GO:0000125
"PCAF complex" evidence=NAS] [GO:0004861 "cyclin-dependent protein
serine/threonine kinase inhibitor activity" evidence=ISS]
[GO:0004468 "lysine N-acetyltransferase activity" evidence=ISS;IDA]
[GO:0019901 "protein kinase binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006473 "protein acetylation"
evidence=TAS] [GO:0007050 "cell cycle arrest" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006360 "transcription
from RNA polymerase I promoter" evidence=TAS] [GO:0006361
"transcription initiation from RNA polymerase I promoter"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IDA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
[GO:0018394 "peptidyl-lysine acetylation" evidence=IDA] [GO:0010835
"regulation of protein ADP-ribosylation" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] Reactome:REACT_71 InterPro:IPR000182
InterPro:IPR001487 InterPro:IPR009464 InterPro:IPR016376
Pfam:PF00439 Pfam:PF06466 Pfam:PF13508 PIRSF:PIRSF003048
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51186 SMART:SM00297
Pathway_Interaction_DB:foxopathway Reactome:REACT_111102
GO:GO:0019048 GO:GO:0008285 GO:GO:0019901 GO:GO:0000776
GO:GO:0032869 GO:GO:0045944 GO:GO:0007219 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0007050 GO:GO:0006338
GO:GO:0003713 Pathway_Interaction_DB:hdac_classiii_pathway
GO:GO:0031674 GO:GO:0005671 GO:GO:0010835
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045736
GO:GO:0016585 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 GO:GO:0004468 InterPro:IPR018359 Reactome:REACT_1788
GO:GO:0043966 GO:GO:0004402 GO:GO:0004861 Reactome:REACT_2155
GO:GO:0018076 GO:GO:0006361 GO:GO:0031672 GO:GO:0042641 KO:K06062
PDB:2RNW PDB:2RNX PDBsum:2RNW PDBsum:2RNX HOGENOM:HOG000007151
OrthoDB:EOG4F1X2G EMBL:U57317 EMBL:BC060823 EMBL:BC070075
IPI:IPI00022055 PIR:S71788 RefSeq:NP_003875.3 UniGene:Hs.533055
PDB:1CM0 PDB:1JM4 PDB:1N72 PDB:1WUG PDB:1WUM PDB:1ZS5 PDB:3GG3
PDBsum:1CM0 PDBsum:1JM4 PDBsum:1N72 PDBsum:1WUG PDBsum:1WUM
PDBsum:1ZS5 PDBsum:3GG3 ProteinModelPortal:Q92831 SMR:Q92831
DIP:DIP-29778N IntAct:Q92831 MINT:MINT-150079 STRING:Q92831
PhosphoSite:Q92831 DMDM:83287776 REPRODUCTION-2DPAGE:Q92831
PaxDb:Q92831 PRIDE:Q92831 Ensembl:ENST00000263754 GeneID:8850
KEGG:hsa:8850 UCSC:uc003cbq.3 CTD:8850 GeneCards:GC03P020081
HGNC:HGNC:8638 HPA:CAB004526 MIM:602303 neXtProt:NX_Q92831
PharmGKB:PA162392705 InParanoid:Q92831 OMA:TISYNST PhylomeDB:Q92831
BindingDB:Q92831 ChEMBL:CHEMBL5500 ChiTaRS:KAT2B
EvolutionaryTrace:Q92831 GenomeRNAi:8850 NextBio:33221 Bgee:Q92831
CleanEx:HS_KAT2B Genevestigator:Q92831 GermOnline:ENSG00000114166
GO:GO:0000125 Uniprot:Q92831
Length = 832
Score = 138 (53.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LY+T+K + Q + F R + P YYEVIR P+D++ ++ +L+ Y
Sbjct: 728 LYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKKL 787
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+AD ++F N +YN P+S YK A L++
Sbjct: 788 FMADLQRVFTNCKEYNPPESEYYKCANILEK 818
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 361 IYKDAKALKKLVQTKKMEIEQ 381
I K + +KKL++ K+ +I +
Sbjct: 663 IKKQKEIIKKLIERKQAQIRK 683
>UNIPROTKB|D4AB82 [details] [associations]
symbol:Trim24 "Protein Trim24" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1560596
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0045893
GO:GO:0008285 GO:GO:0042981 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0046777 GO:GO:0003682 GO:GO:0004672
GO:GO:0031647 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056
GO:GO:0070562 GO:GO:0005726 OrthoDB:EOG4P8FH9 IPI:IPI00566577
Ensembl:ENSRNOT00000017848 ArrayExpress:D4AB82 Uniprot:D4AB82
Length = 1048
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 481 QLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLR--YNQYEHLDEMVADFIQMFDNAC 538
++S FQ P PDYY++I+ P+D+ I +L+ Y Y ++ VADF +F N
Sbjct: 918 EMSLAFQD-PVPLTVPDYYKIIKNPMDLSTIKKRLQEDYCMYTKPEDFVADFRLIFQNCA 976
Query: 539 KYNEPDSHIYKDALSLQ 555
++NEPDS + + L+
Sbjct: 977 EFNEPDSEVANAGIKLE 993
>MGI|MGI:109275 [details] [associations]
symbol:Trim24 "tripartite motif-containing 24" species:10090
"Mus musculus" [GO:0002039 "p53 binding" evidence=ISO;IPI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0003713 "transcription coactivator
activity" evidence=ISO;IDA] [GO:0004672 "protein kinase activity"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI;IMP] [GO:0010628
"positive regulation of gene expression" evidence=IGI;IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=ISO;IMP] [GO:0031647 "regulation of
protein stability" evidence=ISO;IMP] [GO:0034056 "estrogen response
element binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI]
[GO:0046777 "protein autophosphorylation" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IMP] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IMP] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISO] [GO:0071391 "cellular response
to estrogen stimulus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 UniPathway:UPA00143
MGI:MGI:109275 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0046777 GO:GO:0006351
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
GO:GO:0016922 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 CTD:8805 HOGENOM:HOG000252971 HOVERGEN:HBG054599
KO:K08881 OMA:FWAQNIF OrthoDB:EOG4P8FH9 ChiTaRS:TRIM24 EMBL:S78221
EMBL:S78219 EMBL:BC056959 IPI:IPI00131130 IPI:IPI00227778
PIR:S55259 RefSeq:NP_001258993.1 RefSeq:NP_659542.3
UniGene:Mm.41063 ProteinModelPortal:Q64127 SMR:Q64127
DIP:DIP-31476N IntAct:Q64127 STRING:Q64127 PhosphoSite:Q64127
PaxDb:Q64127 PRIDE:Q64127 Ensembl:ENSMUST00000031859
Ensembl:ENSMUST00000120428 GeneID:21848 KEGG:mmu:21848
UCSC:uc009bjk.1 UCSC:uc009bjl.1 GeneTree:ENSGT00530000062982
InParanoid:Q64127 NextBio:301326 Bgee:Q64127 CleanEx:MM_TRIM24
Genevestigator:Q64127 GermOnline:ENSMUSG00000029833 Uniprot:Q64127
Length = 1051
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 481 QLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLR--YNQYEHLDEMVADFIQMFDNAC 538
++S FQ P PDYY++I+ P+D+ I +L+ Y Y ++ VADF +F N
Sbjct: 920 EMSLAFQD-PVPLTVPDYYKIIKNPMDLSTIKKRLQEDYCMYTKPEDFVADFRLIFQNCA 978
Query: 539 KYNEPDSHIYKDALSLQ 555
++NEPDS + + L+
Sbjct: 979 EFNEPDSEVANAGIKLE 995
>UNIPROTKB|F1MP49 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:DAAA02011697 EMBL:DAAA02011696
IPI:IPI01000481 Ensembl:ENSBTAT00000003151 Uniprot:F1MP49
Length = 1053
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 481 QLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLR--YNQYEHLDEMVADFIQMFDNAC 538
++S FQ P PDYY++I+ P+D+ I +L+ Y Y ++ VADF +F N
Sbjct: 922 EMSLAFQD-PVPLTVPDYYKIIKNPMDLSTIKKRLQEDYCMYTKPEDFVADFRLIFQNCA 980
Query: 539 KYNEPDSHIYKDALSLQ 555
++NEPDS + + L+
Sbjct: 981 EFNEPDSEVANAGIKLE 997
>TAIR|locus:2082289 [details] [associations]
symbol:BET10 "AT3G01770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0006351 EMBL:AC009325 EMBL:AC010797
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
PROSITE:PS51525 HSSP:Q03330 HOGENOM:HOG000242557 EMBL:AY057662
EMBL:AY099729 EMBL:AY128906 IPI:IPI00548071 RefSeq:NP_566151.1
UniGene:At.18478 ProteinModelPortal:Q93ZB7 SMR:Q93ZB7 IntAct:Q93ZB7
STRING:Q93ZB7 PRIDE:Q93ZB7 EnsemblPlants:AT3G01770.1 GeneID:821083
KEGG:ath:AT3G01770 TAIR:At3g01770 InParanoid:Q93ZB7 OMA:NENTRFL
PhylomeDB:Q93ZB7 ProtClustDB:CLSN2687978 Genevestigator:Q93ZB7
Uniprot:Q93ZB7
Length = 620
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 40/144 (27%), Positives = 67/144 (46%)
Query: 250 KRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDA--DSRPLHEVFQLLPSKK 307
KR + F A++ E S++ QCE L +M+ + P+ V K
Sbjct: 109 KRVLPFT-ATKPEPVTTSTML---RMKQCESLLKRLMSQQHCWLFNTPVDVV------KL 158
Query: 308 RYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKA 367
P+Y+ +I P+DL T+ ++ G Y+S + D+ L +NA T+N + +Y+ A
Sbjct: 159 NIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADT 218
Query: 368 LKKLVQTKKMEIEQGKFTPAGKSE 391
L K + + IE K + KSE
Sbjct: 219 LSKFFEVRWKTIE--KKSSGTKSE 240
>UNIPROTKB|F1N3U7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 GO:GO:0045893 GO:GO:0007420 GO:GO:0009952
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0007492 GO:GO:0001892 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 OMA:DVIMEDF
GO:GO:0008094 GeneTree:ENSGT00660000095339 EMBL:DAAA02049354
IPI:IPI00698701 Ensembl:ENSBTAT00000019440 Uniprot:F1N3U7
Length = 2853
Score = 139 (54.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 467 YNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEM 526
Y +K +++ F +D PDYY VI++P+D+ + +++ YE L E
Sbjct: 2740 YEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEF 2799
Query: 527 VADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQ 560
VAD ++FDN YN DS Y+ A L+ +Q
Sbjct: 2800 VADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQ 2833
Score = 48 (22.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 44/223 (19%), Positives = 89/223 (39%)
Query: 93 PKRKKIDPSDAMQQIYDVIRNFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQ 152
PK+ K +P ++ D + K GA + I ++++ EV+ + D +
Sbjct: 888 PKKIKTEPDSEKGEVKD--SDAAK--GADQSEMDISKVTEKKDQDVKEVLDSDNDKSFKE 943
Query: 153 QKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQ--KLKTDEYDDLSDFQADIELLVKNA 210
+ ++ D DD+ ++ + ++ +D + + + L+T + + D LL +
Sbjct: 944 EPMEID--DDVKT-ESHLNCQE-SSQVDVVNVSEGFHLRTSYKKKIKSSKLD-GLLERRI 998
Query: 211 KTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSH-----EG---TSQKRSMDFMMASETE 262
K F Q H E M+L + P S E T K + ++ +
Sbjct: 999 KQFTLEEKQRH----EKMKLEGGIKGSGKTPTSSVKSLSESPVITKVKEGCQSDLLTQEQ 1054
Query: 263 DSRDSSICTEDEQNQCEDLFNAVMTSTDAD--SRPLHEVFQLL 303
S S+ +ED C ++++ TD D + L+ Q+L
Sbjct: 1055 SSNTSNNKSEDSTRGCSQSDSSILGITDPDHTANKLYSKDQML 1097
>FB|FBgn0000541 [details] [associations]
symbol:E(bx) "Enhancer of bithorax" species:7227 "Drosophila
melanogaster" [GO:0042766 "nucleosome mobilization"
evidence=IDA;TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016589 "NURF complex" evidence=NAS;IDA;TAS]
[GO:0006334 "nucleosome assembly" evidence=NAS] [GO:0030097
"hemopoiesis" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0035073
"pupariation" evidence=IMP] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=IPI] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IGI;IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 SMART:SM00384 GO:GO:0007095 EMBL:AE014296
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045747 GO:GO:0006351 GO:GO:0048813 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0030097
GO:GO:0046331 GO:GO:0035073 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0035076 GO:GO:0042766 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 KO:K11728 OMA:DVIMEDF
GeneTree:ENSGT00660000095339 EMBL:AF417921 EMBL:AY051776
EMBL:BT023142 EMBL:BT022131 RefSeq:NP_001163304.1
RefSeq:NP_728505.1 RefSeq:NP_728507.1 RefSeq:NP_995946.1
UniGene:Dm.1449 HSSP:Q80TJ7 ProteinModelPortal:Q9W0T1 SMR:Q9W0T1
IntAct:Q9W0T1 MINT:MINT-1583525 STRING:Q9W0T1 PaxDb:Q9W0T1
EnsemblMetazoa:FBtr0072521 EnsemblMetazoa:FBtr0301348
EnsemblMetazoa:FBtr0332104 GeneID:44811 KEGG:dme:Dmel_CG32346
CTD:44811 FlyBase:FBgn0000541 InParanoid:Q9W0T1 OrthoDB:EOG466T1P
PhylomeDB:Q9W0T1 ChiTaRS:E(bx) GenomeRNAi:44811 NextBio:837653
Bgee:Q9W0T1 GermOnline:CG32346 Uniprot:Q9W0T1
Length = 2669
Score = 145 (56.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDYY+VI++P+D++ + KL N Y L E + D ++FDN YN +S YK A +L+
Sbjct: 2591 PDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDMTKIFDNCRYYNPKESSFYKCAEALE 2650
Query: 556 RIVLQTKMHLRED 568
+Q + RE+
Sbjct: 2651 SYFVQKIKNFREN 2663
Score = 41 (19.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 20/72 (27%), Positives = 27/72 (37%)
Query: 259 SETEDS------RDSSICTEDEQNQCEDLFNAVMTS---TDADSRPLHEVFQLLPSKKRY 309
S T+DS +C+ E ED + S D D P + SKK Y
Sbjct: 1104 SNTQDSDKIDYIESMDVCSNVEIESTEDSIVTGLNSGNAEDVDMTPGWRRKRNQKSKKSY 1163
Query: 310 PEYYDVIDVPID 321
DV+D +D
Sbjct: 1164 IGTKDVLDQTLD 1175
>ZFIN|ZDB-GENE-050208-439 [details] [associations]
symbol:crebbpa "CREB binding protein a"
species:7955 "Danio rerio" [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000123 "histone
acetyltransferase complex" evidence=IEA] InterPro:IPR000197
InterPro:IPR000433 InterPro:IPR001487 InterPro:IPR003101
InterPro:IPR009110 InterPro:IPR014744 Pfam:PF00439 Pfam:PF00569
Pfam:PF02135 Pfam:PF02172 Pfam:PF09030 PRINTS:PR00503
PROSITE:PS01357 PROSITE:PS50014 PROSITE:PS50134 PROSITE:PS50135
PROSITE:PS50952 SMART:SM00291 SMART:SM00297 SMART:SM00551
ZFIN:ZDB-GENE-050208-439 GO:GO:0006355 GO:GO:0008270 GO:GO:0003713
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104285 GO:GO:0004402
Gene3D:1.20.1020.10 SUPFAM:SSF57933 Gene3D:1.10.246.20
InterPro:IPR010303 InterPro:IPR013178 Pfam:PF06001 Pfam:PF08214
SUPFAM:SSF47040 GO:GO:0000123 Gene3D:1.10.1630.10 SUPFAM:SSF69125
EMBL:AL953841 EMBL:AL929580 IPI:IPI00758795
Ensembl:ENSDART00000087250 ArrayExpress:F1R0I4 Bgee:F1R0I4
Uniprot:F1R0I4
Length = 2349
Score = 133 (51.9 bits), Expect = 0.00016, P = 0.00016
Identities = 48/197 (24%), Positives = 83/197 (42%)
Query: 189 KTDEYD-DLS-DFQADIELLVKNAKTFYKRNSQEHRDA-QELMELFHSTRNKLLNPQSHE 245
KT+E D D++ + E K+ QE +A QE ME T +K + ++
Sbjct: 898 KTEEQDYDMAVKTEPSTETEEDTGSLLVKKEEQEGSEAKQEPME----TEDKKTDLKTET 953
Query: 246 GTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTDADSRPLHEVFQLLPS 305
+ + +S SR E+ + ++ D +S P + P
Sbjct: 954 KEEDESKTNGTASSSPSQSRRKIFKPEELRQALMPTLESLYRQ-DPESLPFRQPVD--PI 1010
Query: 306 KKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDA 365
P+Y+D++ PIDL TI R++ G+Y D+ LM NA +N S++YK
Sbjct: 1011 LLGIPDYFDIVKNPIDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKYC 1070
Query: 366 KALKKLVQTKKMEIEQG 382
L ++ + + + QG
Sbjct: 1071 SKLAEVFEQEIDPVMQG 1087
>ZFIN|ZDB-GENE-060502-1 [details] [associations]
symbol:brd9 "bromodomain containing 9" species:7955
"Danio rerio" [GO:0070577 "histone acetyl-lysine binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 ZFIN:ZDB-GENE-060502-1 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 HOGENOM:HOG000070022
KO:K11723 InterPro:IPR021900 Pfam:PF12024 EMBL:BC049140
IPI:IPI00493069 RefSeq:NP_956569.1 UniGene:Dr.77449
ProteinModelPortal:Q7ZUF2 SMR:Q7ZUF2 PRIDE:Q7ZUF2 GeneID:393245
KEGG:dre:393245 CTD:65980 HOVERGEN:HBG107536 InParanoid:Q7ZUF2
OrthoDB:EOG4GQQ4R NextBio:20814308 ArrayExpress:Q7ZUF2
Uniprot:Q7ZUF2
Length = 631
Score = 123 (48.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
P Y +I+ P+D + K+ N+Y+ + E ADF M DNA YN P++ YK A L
Sbjct: 201 PGYSMIIKHPMDFSTMKDKIAANEYKTITEFKADFKLMCDNAMVYNRPETVYYKAAKKLL 260
Query: 556 RI---VLQTKMHLREDEDSVPDVPAAVQELL 583
++ + + D+D P+ P V E++
Sbjct: 261 HTGFKMMSKQAAILGDDDIAPEEP--VTEMM 289
Score = 49 (22.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/53 (22%), Positives = 28/53 (52%)
Query: 150 KIQQKLKTDEYDDLSDFQADIELLVVTNPIDFIKIQQKLKTDEYDDLSDFQAD 202
K ++K K + + A +E + P++ + ++K K D+++ S+ +AD
Sbjct: 89 KEEKKKKREREQSETASTAPVEPFTLPKPVEVVVEEKKRKRDKFE--SESEAD 139
>UNIPROTKB|F1MRA1 [details] [associations]
symbol:F1MRA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045736 "negative
regulation of cyclin-dependent protein serine/threonine kinase
activity" evidence=IEA] [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0031674
"I band" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0018076
"N-terminal peptidyl-lysine acetylation" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0004861 "cyclin-dependent protein
serine/threonine kinase inhibitor activity" evidence=IEA]
[GO:0004468 "lysine N-acetyltransferase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] InterPro:IPR000182
InterPro:IPR001487 InterPro:IPR009464 InterPro:IPR016376
Pfam:PF00439 Pfam:PF06466 Pfam:PF13508 PIRSF:PIRSF003048
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51186 SMART:SM00297
GO:GO:0008285 GO:GO:0000776 GO:GO:0032869 GO:GO:0045944
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0003713
GO:GO:0031674 GO:GO:0005671 GO:GO:0045736 GO:GO:0016585
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0004468
InterPro:IPR018359 GO:GO:0043966 GO:GO:0004402 GO:GO:0004861
GO:GO:0018076 GO:GO:0031672 GO:GO:0042641
GeneTree:ENSGT00660000095339 OMA:TISYNST EMBL:DAAA02001057
IPI:IPI00714425 Ensembl:ENSBTAT00000000994 ArrayExpress:F1MRA1
Uniprot:F1MRA1
Length = 836
Score = 136 (52.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LY+T++ + Q + F R + P YYEVIR P+D++ ++ +L+ Y
Sbjct: 732 LYSTLRSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKKL 791
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+AD ++F N +YN P+S YK A L++
Sbjct: 792 FMADLQRVFTNCKEYNPPESEYYKCASILEK 822
Score = 38 (18.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 361 IYKDAKALKKLVQTKKMEIEQ 381
I K + +KKL++ K+ +I +
Sbjct: 667 IKKQKEIIKKLIERKQAQIRK 687
>UNIPROTKB|Q12830 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016589
"NURF complex" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007420 "brain development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0005737
GO:GO:0045893 GO:GO:0007420 GO:GO:0009952 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0008134 GO:GO:0007492 GO:GO:0001892
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 EMBL:AB032251 EMBL:AC006534 EMBL:AC107377
EMBL:AC134407 EMBL:U05237 EMBL:AY282495 EMBL:BC067234
IPI:IPI00254408 IPI:IPI00376404 IPI:IPI00785110 PIR:G01252
RefSeq:NP_004450.3 RefSeq:NP_872579.2 UniGene:Hs.444200 PDB:2F6J
PDB:2F6N PDB:2FSA PDB:2FUI PDB:2FUU PDB:2RI7 PDB:3QZS PDB:3QZT
PDB:3QZV PDB:3UV2 PDBsum:2F6J PDBsum:2F6N PDBsum:2FSA PDBsum:2FUI
PDBsum:2FUU PDBsum:2RI7 PDBsum:3QZS PDBsum:3QZT PDBsum:3QZV
PDBsum:3UV2 ProteinModelPortal:Q12830 SMR:Q12830 IntAct:Q12830
STRING:Q12830 PhosphoSite:Q12830 DMDM:215274183 PaxDb:Q12830
PRIDE:Q12830 Ensembl:ENST00000306378 Ensembl:ENST00000321892
Ensembl:ENST00000335221 Ensembl:ENST00000571054
Ensembl:ENST00000573834 Ensembl:ENST00000576412 GeneID:2186
KEGG:hsa:2186 UCSC:uc002jge.3 UCSC:uc002jgf.3 CTD:2186
GeneCards:GC17P065821 HGNC:HGNC:3581 HPA:HPA029069 MIM:601819
neXtProt:NX_Q12830 PharmGKB:PA162377557 HOGENOM:HOG000231041
HOVERGEN:HBG080062 KO:K11728 OMA:DVIMEDF ChiTaRS:BPTF
EvolutionaryTrace:Q12830 GenomeRNAi:2186 NextBio:8831
ArrayExpress:Q12830 Bgee:Q12830 CleanEx:HS_BPTF
Genevestigator:Q12830 GermOnline:ENSG00000171634 Uniprot:Q12830
Length = 3046
Score = 139 (54.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 467 YNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEM 526
Y +K +++ F +D PDYY VI++P+D+ + +++ YE L E
Sbjct: 2933 YEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEF 2992
Query: 527 VADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQ 560
VAD ++FDN YN DS Y+ A L+ +Q
Sbjct: 2993 VADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQ 3026
Score = 47 (21.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 236 NKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCED 280
NK++ HE ++ D + E E+ D+ T+D ++ ED
Sbjct: 122 NKVVY-DDHESEEEEEEEDMVSEEEEEEDGDAEE-TQDSEDDEED 164
Score = 43 (20.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 18/93 (19%), Positives = 40/93 (43%)
Query: 191 DEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQK 250
+++++ + + LL + R+S E + + + +T P+S+ +Q
Sbjct: 1599 EDFNERNSSETKSHLLSSSDAEGNYRDSLETLPSTKESDSTQTTTPSASCPESNS-VNQV 1657
Query: 251 RSMDFMMASETEDSRDSSICTEDEQNQCEDLFN 283
M+ + SE + S I +E+E N D +
Sbjct: 1658 EDME-IETSEVKKVTSSPITSEEESNLSNDFID 1689
Score = 42 (19.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 258 ASETEDSRDSSICTEDEQNQCED 280
A ET+DS D EDE + +D
Sbjct: 152 AEETQDSEDDE---EDEMEEDDD 171
>UNIPROTKB|F8W820 [details] [associations]
symbol:BRD8 "Bromodomain-containing protein 8" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005739 GO:GO:0005634 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AC109442 EMBL:AC113382 HGNC:HGNC:19874
ChiTaRS:BRD8 EMBL:AC106752 IPI:IPI00878385
ProteinModelPortal:F8W820 SMR:F8W820 Ensembl:ENST00000455658
UCSC:uc011cyn.1 ArrayExpress:F8W820 Bgee:F8W820 Uniprot:F8W820
Length = 837
Score = 134 (52.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 39/163 (23%), Positives = 77/163 (47%)
Query: 244 HEGTSQKRSMDFMMASETEDSRDSSICTEDEQN-QCEDLFN-AVMTSTDADSRPLHEVFQ 301
H T Q ++ + S S+ S+C+ED++ Q + ++ A+M A + +
Sbjct: 633 HNATLQSHTLADSIPSSPASSQ-FSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVF 691
Query: 302 LLP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
L P + P Y+ ++ P+DL TI + I++G S + ++D++LM +NA +N
Sbjct: 692 LQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHD 751
Query: 361 IYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQS 403
+Y A +++ V + + + I +K +RG S
Sbjct: 752 VYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDS 794
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 93 PKRKKIDPSDAMQQIYDVI 111
PKRK+ + + ++ + DVI
Sbjct: 37 PKRKRGEKGEVVETVEDVI 55
>WB|WBGene00000366 [details] [associations]
symbol:cbp-1 species:6239 "Caenorhabditis elegans"
[GO:0004402 "histone acetyltransferase activity"
evidence=IEA;ISS;IDA] [GO:0003712 "transcription cofactor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040039 "inductive cell
migration" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0019915 "lipid storage"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0016573 "histone acetylation"
evidence=IDA] [GO:0018393 "internal peptidyl-lysine acetylation"
evidence=IMP;IDA] [GO:0004468 "lysine N-acetyltransferase activity"
evidence=IMP;IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] InterPro:IPR000197 InterPro:IPR000433
InterPro:IPR001487 InterPro:IPR003101 Pfam:PF00439 Pfam:PF00569
Pfam:PF02135 Pfam:PF02172 PRINTS:PR00503 PROSITE:PS01357
PROSITE:PS50014 PROSITE:PS50134 PROSITE:PS50135 PROSITE:PS50952
SMART:SM00291 SMART:SM00297 SMART:SM00551 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0005737 GO:GO:0006915
GO:GO:0046872 GO:GO:0018996 GO:GO:0008270 GO:GO:0045944
GO:GO:0048477 GO:GO:0007283 GO:GO:0019915 GO:GO:0040039
GO:GO:0003712 PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0004468 InterPro:IPR018359
GeneTree:ENSGT00700000104285 GO:GO:0004402 Gene3D:1.20.1020.10
SUPFAM:SSF57933 EMBL:Z29095 PIR:G88564 PIR:S60123
RefSeq:NP_001122711.2 RefSeq:NP_499160.2 RefSeq:NP_499161.2
ProteinModelPortal:P34545 STRING:P34545 PaxDb:P34545 PRIDE:P34545
GeneID:176380 KEGG:cel:CELE_R10E11.1 UCSC:R10E11.1c CTD:176380
WormBase:R10E11.1a WormBase:R10E11.1b WormBase:R10E11.1c
HOGENOM:HOG000019113 InParanoid:P34545 OMA:TRYESIQ NextBio:892328
ArrayExpress:P34545 Gene3D:1.10.246.20 InterPro:IPR010303
InterPro:IPR013178 Pfam:PF06001 Pfam:PF08214 SUPFAM:SSF47040
Uniprot:P34545
Length = 2017
Score = 131 (51.2 bits), Expect = 0.00022, P = 0.00022
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
PDY+E+I++P+D+E + KL QY++ + D M DNA YN +S +YK L L
Sbjct: 901 PDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAWLYNRKNSKVYKYGLKLS 960
Query: 556 RI 557
+
Sbjct: 961 EM 962
>RGD|1307003 [details] [associations]
symbol:Brd8 "bromodomain containing 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=ISO] [GO:0043967 "histone H4
acetylation" evidence=ISO] [GO:0043968 "histone H2A acetylation"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 RGD:1307003 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 CTD:10902 HOGENOM:HOG000074125 HOVERGEN:HBG050732
KO:K11321 IPI:IPI00358465 EMBL:AB180485 RefSeq:NP_001008509.1
UniGene:Rn.98723 ProteinModelPortal:Q5TLG7 STRING:Q5TLG7
PhosphoSite:Q5TLG7 GeneID:291691 KEGG:rno:291691 InParanoid:Q5TLG7
NextBio:633034 Genevestigator:Q5TLG7 Uniprot:Q5TLG7
Length = 957
Score = 135 (52.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 39/163 (23%), Positives = 77/163 (47%)
Query: 244 HEGTSQKRSMDFMMASETEDSRDSSICTEDEQN-QCEDLFN-AVMTSTDADSRPLHEVFQ 301
H T Q ++ + S S+ S+C+ED++ Q + ++ A+M A + +
Sbjct: 753 HNATLQSHTLGDSIPSSPASSQ-FSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVF 811
Query: 302 LLP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
L P + P Y+ ++ P+DL TI + I++G S + ++D++LM +NA +N
Sbjct: 812 LQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHD 871
Query: 361 IYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQS 403
+Y A +++ V + + + I +K +RG S
Sbjct: 872 VYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDS 914
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 93 PKRKKIDPSDAMQQIYDVI 111
PKRK+ + + ++ + DVI
Sbjct: 84 PKRKRGEKGEVVETVEDVI 102
>UNIPROTKB|E9PTN1 [details] [associations]
symbol:Brd8 "Protein Brd8" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0043967
"histone H4 acetylation" evidence=IEA] [GO:0043968 "histone H2A
acetylation" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 RGD:1307003
GO:GO:0005739 GO:GO:0035267 GO:GO:0043968 GO:GO:0043967
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00530000064262
OMA:NEISMII IPI:IPI00358465 Ensembl:ENSRNOT00000048752
ArrayExpress:E9PTN1 Uniprot:E9PTN1
Length = 957
Score = 135 (52.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 39/163 (23%), Positives = 77/163 (47%)
Query: 244 HEGTSQKRSMDFMMASETEDSRDSSICTEDEQN-QCEDLFN-AVMTSTDADSRPLHEVFQ 301
H T Q ++ + S S+ S+C+ED++ Q + ++ A+M A + +
Sbjct: 753 HNATLQSHTLGDSIPSSPASSQ-FSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVF 811
Query: 302 LLP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
L P + P Y+ ++ P+DL TI + I++G S + ++D++LM +NA +N
Sbjct: 812 LQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHD 871
Query: 361 IYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQS 403
+Y A +++ V + + + I +K +RG S
Sbjct: 872 VYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDS 914
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 93 PKRKKIDPSDAMQQIYDVI 111
PKRK+ + + ++ + DVI
Sbjct: 84 PKRKRGEKGEVVETVEDVI 102
>UNIPROTKB|B5MCW3 [details] [associations]
symbol:BRD8 "Bromodomain-containing protein 8" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005739 GO:GO:0005634 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AC109442 EMBL:AC113382 HGNC:HGNC:19874
HOGENOM:HOG000074125 HOVERGEN:HBG050732 ChiTaRS:BRD8 EMBL:AC106752
IPI:IPI00878385 ProteinModelPortal:B5MCW3 SMR:B5MCW3 STRING:B5MCW3
Ensembl:ENST00000402931 ArrayExpress:B5MCW3 Bgee:B5MCW3
Uniprot:B5MCW3
Length = 878
Score = 134 (52.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 39/163 (23%), Positives = 77/163 (47%)
Query: 244 HEGTSQKRSMDFMMASETEDSRDSSICTEDEQN-QCEDLFN-AVMTSTDADSRPLHEVFQ 301
H T Q ++ + S S+ S+C+ED++ Q + ++ A+M A + +
Sbjct: 674 HNATLQSHTLADSIPSSPASSQ-FSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVF 732
Query: 302 LLP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
L P + P Y+ ++ P+DL TI + I++G S + ++D++LM +NA +N
Sbjct: 733 LQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHD 792
Query: 361 IYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQS 403
+Y A +++ V + + + I +K +RG S
Sbjct: 793 VYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDS 835
Score = 40 (19.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 93 PKRKKIDPSDAMQQIYDVI 111
PKRK+ + + ++ + DVI
Sbjct: 78 PKRKRGEKGEVVETVEDVI 96
>MGI|MGI:1343094 [details] [associations]
symbol:Kat2b "K(lysine) acetyltransferase 2B" species:10090
"Mus musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=IDA] [GO:0000776 "kinetochore" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0004468
"lysine N-acetyltransferase activity" evidence=ISO;IDA] [GO:0004861
"cyclin-dependent protein serine/threonine kinase inhibitor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006473 "protein acetylation" evidence=TAS] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0008080 "N-acetyltransferase activity"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0010835 "regulation of protein
ADP-ribosylation" evidence=ISO] [GO:0016407 "acetyltransferase
activity" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016746 "transferase activity, transferring acyl groups"
evidence=IEA] [GO:0018076 "N-terminal peptidyl-lysine acetylation"
evidence=ISO] [GO:0018393 "internal peptidyl-lysine acetylation"
evidence=IMP] [GO:0018394 "peptidyl-lysine acetylation"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0031672 "A band" evidence=IDA] [GO:0031674 "I band"
evidence=IDA] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045736 "negative regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IGI]
InterPro:IPR000182 InterPro:IPR001487 InterPro:IPR009464
InterPro:IPR016376 Pfam:PF00439 Pfam:PF06466 Pfam:PF13508
PIRSF:PIRSF003048 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51186
SMART:SM00297 MGI:MGI:1343094 GO:GO:0008285 GO:GO:0000776
GO:GO:0032869 GO:GO:0045944 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0016573 GO:GO:0006351 GO:GO:0007049
GO:GO:0003713 GO:GO:0031674 GO:GO:0005671 GO:GO:0045736
GO:GO:0016585 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 GO:GO:0004468 InterPro:IPR018359 GO:GO:0043966
GO:GO:0004402 GO:GO:0004861 GO:GO:0000123 GO:GO:0018076
GO:GO:0031672 GO:GO:0042641 KO:K06062 GeneTree:ENSGT00660000095339
HSSP:Q92831 HOGENOM:HOG000007151 OrthoDB:EOG4F1X2G CTD:8850
OMA:TISYNST ChiTaRS:KAT2B EMBL:AF254442 EMBL:AK156290 EMBL:BC082581
EMBL:BC145896 IPI:IPI00471164 RefSeq:NP_064389.2 UniGene:Mm.255025
ProteinModelPortal:Q9JHD1 SMR:Q9JHD1 DIP:DIP-29281N
MINT:MINT-6166901 STRING:Q9JHD1 PRIDE:Q9JHD1
Ensembl:ENSMUST00000000724 GeneID:18519 KEGG:mmu:18519
InParanoid:Q9JHD1 NextBio:294272 Bgee:Q9JHD1 Genevestigator:Q9JHD1
Uniprot:Q9JHD1
Length = 813
Score = 135 (52.6 bits), Expect = 0.00026, Sum P(2) = 0.00025
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LY+T+K + + F R + P YYEVIR P+D++ ++ +LR Y
Sbjct: 709 LYSTLKNILQQVKNHPNAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLRNRYYVSKKL 768
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQR 556
+AD ++F N +YN P+S YK A L++
Sbjct: 769 FMADLQRVFTNCKEYNPPESEYYKCASILEK 799
Score = 38 (18.4 bits), Expect = 0.00026, Sum P(2) = 0.00025
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 361 IYKDAKALKKLVQTKKMEIEQ 381
I K + +KKL++ K+ +I +
Sbjct: 644 IKKQKEIIKKLIERKQAQIRK 664
>TAIR|locus:2014594 [details] [associations]
symbol:AT1G76380 "AT1G76380" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506
GO:GO:0003677 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 KO:K11723 EMBL:BT030372
IPI:IPI00529766 RefSeq:NP_974153.1 UniGene:At.34666
ProteinModelPortal:A4FVS4 SMR:A4FVS4 PaxDb:A4FVS4 PRIDE:A4FVS4
EnsemblPlants:AT1G76380.2 GeneID:843970 KEGG:ath:AT1G76380
TAIR:At1g76380 HOGENOM:HOG000253968 InParanoid:A4FVS4 OMA:ETSVRIN
PhylomeDB:A4FVS4 ProtClustDB:CLSN2679424 Genevestigator:A4FVS4
Uniprot:A4FVS4
Length = 580
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 20/64 (31%), Positives = 40/64 (62%)
Query: 310 PEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALK 369
P+YY++I P+D T+ ++++ G Y +L E+D+ L+ NA +N + Y+ A+A+
Sbjct: 176 PDYYEIIKNPMDFTTLRKKLESGAYTTLEQFEQDVFLICTNAMEYNSADTVYYRQARAML 235
Query: 370 KLVQ 373
+L +
Sbjct: 236 ELAK 239
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALS 553
+ PDYYE+I+ P+D + KL Y L++ D + NA +YN D+ Y+ A +
Sbjct: 174 ELPDYYEIIKNPMDFTTLRKKLESGAYTTLEQFEQDVFLICTNAMEYNSADTVYYRQARA 233
Query: 554 LQRIVLQTKMHLREDEDSVPDVPAAVQ 580
+ + + +LR++ D V + Q
Sbjct: 234 MLELAKKDFGNLRQESDGEEPVSLSQQ 260
>UNIPROTKB|F1RH79 [details] [associations]
symbol:BRD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005739
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 Gene3D:1.20.920.10
SUPFAM:SSF47370 CTD:10902 KO:K11321 GeneTree:ENSGT00530000064262
OMA:NEISMII EMBL:CU928408 EMBL:FP312853 RefSeq:XP_003124010.2
UniGene:Ssc.35024 Ensembl:ENSSSCT00000015653 GeneID:100518182
KEGG:ssc:100518182 Uniprot:F1RH79
Length = 951
Score = 134 (52.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 39/163 (23%), Positives = 77/163 (47%)
Query: 244 HEGTSQKRSMDFMMASETEDSRDSSICTEDEQN-QCEDLFN-AVMTSTDADSRPLHEVFQ 301
H T Q ++ + S S+ S+C+ED++ Q + ++ A+M A + +
Sbjct: 747 HNATLQSHTLADSIPSSPASSQ-FSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVF 805
Query: 302 LLP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
L P + P Y+ ++ P+DL TI + I++G S + ++D++LM +NA +N
Sbjct: 806 LQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHD 865
Query: 361 IYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQS 403
+Y A +++ V + + + I +K +RG S
Sbjct: 866 VYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDS 908
Score = 40 (19.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 93 PKRKKIDPSDAMQQIYDVI 111
PKRK+ + + ++ + DVI
Sbjct: 78 PKRKRGEKGEVVETVEDVI 96
>MGI|MGI:1925906 [details] [associations]
symbol:Brd8 "bromodomain containing 8" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=ISO] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=ISO] [GO:0043968
"histone H2A acetylation" evidence=ISO] InterPro:IPR001487
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
MGI:MGI:1925906 GO:GO:0005739 GO:GO:0006355 GO:GO:0006351
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0040008
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
CTD:10902 HOGENOM:HOG000074125 HOVERGEN:HBG050732 KO:K11321
OrthoDB:EOG470THC EMBL:AK032320 EMBL:AK161689 EMBL:BC023160
EMBL:BC025644 IPI:IPI00153722 IPI:IPI00653134 RefSeq:NP_084423.2
UniGene:Mm.411740 UniGene:Mm.45602 ProteinModelPortal:Q8R3B7
SMR:Q8R3B7 IntAct:Q8R3B7 STRING:Q8R3B7 PhosphoSite:Q8R3B7
PaxDb:Q8R3B7 PRIDE:Q8R3B7 Ensembl:ENSMUST00000003876
Ensembl:ENSMUST00000097626 GeneID:78656 KEGG:mmu:78656
UCSC:uc008ekv.1 UCSC:uc008ekx.1 GeneTree:ENSGT00530000064262
NextBio:349290 Bgee:Q8R3B7 CleanEx:MM_BRD8 Genevestigator:Q8R3B7
GermOnline:ENSMUSG00000003778 Uniprot:Q8R3B7
Length = 951
Score = 134 (52.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 39/163 (23%), Positives = 77/163 (47%)
Query: 244 HEGTSQKRSMDFMMASETEDSRDSSICTEDEQN-QCEDLFN-AVMTSTDADSRPLHEVFQ 301
H T Q ++ + S S+ S+C+ED++ Q + ++ A+M A + +
Sbjct: 747 HNATLQSHTLADSIPSSPASSQ-FSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVF 805
Query: 302 LLP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
L P + P Y+ ++ P+DL TI + I++G S + ++D++LM +NA +N
Sbjct: 806 LQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHD 865
Query: 361 IYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQS 403
+Y A +++ V + + + I +K +RG S
Sbjct: 866 VYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDS 908
Score = 40 (19.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 93 PKRKKIDPSDAMQQIYDVI 111
PKRK+ + + ++ + DVI
Sbjct: 78 PKRKRGEKGEVVETVEDVI 96
>RGD|1562050 [details] [associations]
symbol:Taf1 "TAF1 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0004402 "histone acetyltransferase activity"
evidence=ISO] [GO:0004674 "protein serine/threonine kinase
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=IEA;ISO]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0018105
"peptidyl-serine phosphorylation" evidence=ISO] [GO:0018107
"peptidyl-threonine phosphorylation" evidence=ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0042493 "response to drug"
evidence=IEP] [GO:0045120 "pronucleus" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046777 "protein autophosphorylation"
evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001487 InterPro:IPR011177
Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 RGD:1562050 GO:GO:0005634 GO:GO:0006355 GO:GO:0042493
GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0045120 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055 OrthoDB:EOG4K3KVC
IPI:IPI00951101 Ensembl:ENSRNOT00000066825 UCSC:RGD:1562050
ArrayExpress:D3ZM43 Uniprot:D3ZM43
Length = 1902
Score = 129 (50.5 bits), Expect = 0.00034, P = 0.00034
Identities = 64/276 (23%), Positives = 116/276 (42%)
Query: 127 IRIPKKRQEPSYHEVVTNPI--DFI----KIQQKLKTDEYDDLSDFQADI--ELLVVTNP 178
++ PK++ P V + D++ K + +TD LS I ++ + N
Sbjct: 1375 LKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNT 1434
Query: 179 IDF-IKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
F + K+ D Y ++ D++ L +N + + +E R+ EL+ +T N
Sbjct: 1435 YPFHTPVNAKVVKDYYKIITR-PMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYN- 1492
Query: 238 LLNPQSHEGTSQKRSMDFMMASETEDSRD---------SSICTEDEQNQCEDLFNAVMTS 288
P+ H T +SM + + ++ D + + +D+Q + + ++T
Sbjct: 1493 --GPK-HSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQ 1549
Query: 289 ---TDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
DS P H +KK P+YY VI P+DL TI + I KY S D+
Sbjct: 1550 KMMAVPDSWPFHHPV----NKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVN 1605
Query: 346 LMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
L+ N+ +N P SQ K A+ + + E ++
Sbjct: 1606 LILANSVKYNGPESQYTKTAQEIVNVCHQTLTEYDE 1641
>UNIPROTKB|G4MRL2 [details] [associations]
symbol:MGG_11716 "Histone acetyltransferase GCN5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000182
InterPro:IPR001487 Pfam:PF00439 Pfam:PF13508 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51186 SMART:SM00297 GO:GO:0000775
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0000124
GO:GO:0005671 GO:GO:0046695 GO:GO:0034401 EMBL:CM001231
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0010484 GO:GO:0043966 GO:GO:0032968
KO:K06062 RefSeq:XP_003710047.1 ProteinModelPortal:G4MRL2
SMR:G4MRL2 EnsemblFungi:MGG_11716T0 GeneID:5049510
KEGG:mgr:MGG_11716 Uniprot:G4MRL2
Length = 411
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 305 SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKD 364
+K P+YY VI P+DL TI R++ YA+ D+ +D+ L+ N +N P + +K
Sbjct: 328 NKDEIPDYYKVITSPMDLSTIEERLEQDLYATPKDLVEDVKLIVSNCRQYNNPTTIYHKC 387
Query: 365 AKALKKLVQTKKMEIEQ 381
A L+K + T E+ +
Sbjct: 388 ANKLEKYMWTLIKEVPE 404
>GENEDB_PFALCIPARUM|PF08_0034 [details] [associations]
symbol:gcn5 "histone acetyltransferase Gcn5,
putative" species:5833 "Plasmodium falciparum" [GO:0004402 "histone
acetyltransferase activity" evidence=ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] InterPro:IPR000182
InterPro:IPR001487 Pfam:PF00439 Pfam:PF00583 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51186 SMART:SM00297 GO:GO:0006355
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0004402 KO:K06062
EMBL:AL844507 GenomeReviews:AL844507_GR RefSeq:XP_001349291.2
ProteinModelPortal:Q8IB67 IntAct:Q8IB67 MINT:MINT-1577763
EnsemblProtists:PF08_0034:mRNA GeneID:2655485 KEGG:pfa:PF08_0034
EuPathDB:PlasmoDB:PF3D7_0823300 ProtClustDB:CLSZ2734131
Uniprot:Q8IB67
Length = 1465
Score = 117 (46.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 486 FQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDS 545
F + S + PDYY++I++P D+ + K R+ Y+ ++ + +MFDN YN P +
Sbjct: 1381 FLKPVSLSEAPDYYDIIKEPTDILTMRRKARHGDYKTKEDFGIELKRMFDNCRLYNAPTT 1440
Query: 546 HIYKDALSLQRIV 558
+K A LQ ++
Sbjct: 1441 IYFKYANELQTLI 1453
Score = 61 (26.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 42/195 (21%), Positives = 84/195 (43%)
Query: 113 NFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIEL 172
N K DG L F+ K + + E + N + I ++ LK D L DF +
Sbjct: 692 NLKNIDGLDLSTNFVN-GKYISKLNNDEKIYNVVHSI-VKDSLK----DCLVDFYNNANY 745
Query: 173 LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEH--RDAQELMEL 230
+ + +DF+ + +DL D + D + K + K++++EH ++ +M+
Sbjct: 746 -IFKDKLDFVCNSNTPTCNNINDLEDNKKDDGHVDKQNYSLEKKDNEEHTNNNSDPIMDG 804
Query: 231 FHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTD 290
K+ S+K+ D + + ++ + T++++NQ +D N T+T
Sbjct: 805 VELDVKKI---------SEKKE-DQIEKDKPKNDNTKNDNTKEDKNQNDD--NK--TNTS 850
Query: 291 ADSRPLHEVFQLLPS 305
P +EV ++ S
Sbjct: 851 IPKTPKNEVKNVITS 865
>UNIPROTKB|Q8IB67 [details] [associations]
symbol:gcn5 "Histone acetyltransferase GCN5, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004402 "histone
acetyltransferase activity" evidence=ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0016573 "histone
acetylation" evidence=ISS] InterPro:IPR000182 InterPro:IPR001487
Pfam:PF00439 Pfam:PF00583 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51186 SMART:SM00297 GO:GO:0006355 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0004402 KO:K06062 EMBL:AL844507
GenomeReviews:AL844507_GR RefSeq:XP_001349291.2
ProteinModelPortal:Q8IB67 IntAct:Q8IB67 MINT:MINT-1577763
EnsemblProtists:PF08_0034:mRNA GeneID:2655485 KEGG:pfa:PF08_0034
EuPathDB:PlasmoDB:PF3D7_0823300 ProtClustDB:CLSZ2734131
Uniprot:Q8IB67
Length = 1465
Score = 117 (46.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 486 FQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDS 545
F + S + PDYY++I++P D+ + K R+ Y+ ++ + +MFDN YN P +
Sbjct: 1381 FLKPVSLSEAPDYYDIIKEPTDILTMRRKARHGDYKTKEDFGIELKRMFDNCRLYNAPTT 1440
Query: 546 HIYKDALSLQRIV 558
+K A LQ ++
Sbjct: 1441 IYFKYANELQTLI 1453
Score = 61 (26.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 42/195 (21%), Positives = 84/195 (43%)
Query: 113 NFKKEDGALLCDPFIRIPKKRQEPSYHEVVTNPIDFIKIQQKLKTDEYDDLSDFQADIEL 172
N K DG L F+ K + + E + N + I ++ LK D L DF +
Sbjct: 692 NLKNIDGLDLSTNFVN-GKYISKLNNDEKIYNVVHSI-VKDSLK----DCLVDFYNNANY 745
Query: 173 LVVTNPIDFIKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEH--RDAQELMEL 230
+ + +DF+ + +DL D + D + K + K++++EH ++ +M+
Sbjct: 746 -IFKDKLDFVCNSNTPTCNNINDLEDNKKDDGHVDKQNYSLEKKDNEEHTNNNSDPIMDG 804
Query: 231 FHSTRNKLLNPQSHEGTSQKRSMDFMMASETEDSRDSSICTEDEQNQCEDLFNAVMTSTD 290
K+ S+K+ D + + ++ + T++++NQ +D N T+T
Sbjct: 805 VELDVKKI---------SEKKE-DQIEKDKPKNDNTKNDNTKEDKNQNDD--NK--TNTS 850
Query: 291 ADSRPLHEVFQLLPS 305
P +EV ++ S
Sbjct: 851 IPKTPKNEVKNVITS 865
>TAIR|locus:2030422 [details] [associations]
symbol:AT1G20670 "AT1G20670" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 EMBL:CP002684 GO:GO:0003677
EMBL:AC069251 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 KO:K11723 HSSP:Q92793 HOGENOM:HOG000253968
ProtClustDB:CLSN2679424 EMBL:BT046188 IPI:IPI00548126
RefSeq:NP_173490.1 UniGene:At.41698 ProteinModelPortal:Q9LM88
SMR:Q9LM88 PRIDE:Q9LM88 EnsemblPlants:AT1G20670.1 GeneID:838655
KEGG:ath:AT1G20670 TAIR:At1g20670 InParanoid:Q9LM88 OMA:SSIYELP
PhylomeDB:Q9LM88 Genevestigator:Q9LM88 Uniprot:Q9LM88
Length = 652
Score = 132 (51.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 26/88 (29%), Positives = 48/88 (54%)
Query: 494 DYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALS 553
+ PDY+E+I+ P+D + +KL Y L++ D + NA +YN D+ Y+ A +
Sbjct: 204 ELPDYFEIIKNPMDFSTLRNKLDSGAYSTLEQFERDVFLICTNAMEYNSADTVYYRQARA 263
Query: 554 LQRIVLQTKMHLREDEDSVPDVPAAVQE 581
+Q + + +LR+D D + P + Q+
Sbjct: 264 IQELAKKDFENLRQDSDD--EEPQSQQQ 289
Score = 37 (18.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 214 YKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTS 248
+ N+ ++ L H R+K NP S++G S
Sbjct: 51 HHHNNNNRSGSKNPNSLNH--RSKRRNPNSNDGDS 83
>UNIPROTKB|F1P5U7 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 EMBL:AADN02013226 IPI:IPI00580748
Ensembl:ENSGALT00000008777 ArrayExpress:F1P5U7 Uniprot:F1P5U7
Length = 1816
Score = 128 (50.1 bits), Expect = 0.00041, P = 0.00041
Identities = 63/276 (22%), Positives = 116/276 (42%)
Query: 127 IRIPKKRQEPSYHEVVTNPI--DFI----KIQQKLKTDEYDDLSDFQADI--ELLVVTNP 178
++ PK++ P V + D++ K + +TD LS I ++ + N
Sbjct: 1353 LKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILEGIINDMRDLPNT 1412
Query: 179 IDF-IKIQQKLKTDEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNK 237
F + K+ D Y ++ D++ L +N + + +E R+ EL+ +T N
Sbjct: 1413 YPFHTPVNPKVVKDYYKIITR-PMDLQTLRENVRKRQYPSREEFREHLELIVKNSATYN- 1470
Query: 238 LLNPQSHEGTSQKRSMDFMMASETEDSRD---------SSICTEDEQNQCEDLFNAVMTS 288
P+ H T +SM + + ++ D + + +D+Q + + ++T
Sbjct: 1471 --GPK-HSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQ 1527
Query: 289 ---TDADSRPLHEVFQLLPSKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLI 345
DS P H +KK P+YY VI P+DL TI + I KY + D+
Sbjct: 1528 KMMAVPDSWPFHHPV----NKKFVPDYYKVITNPMDLETICKNISKHKYQNRETFLDDVN 1583
Query: 346 LMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
L+ N+ +N P SQ K A+ + + E ++
Sbjct: 1584 LVLANSIKYNGPDSQYTKTAQEIVNICYQTLAEYDE 1619
>RGD|1597089 [details] [associations]
symbol:Baz1b "bromodomain adjacent to zinc finger domain, 1B"
species:10116 "Rattus norvegicus" [GO:0000793 "condensed
chromosome" evidence=ISO] [GO:0003007 "heart morphogenesis"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0004713 "protein tyrosine kinase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005721 "centromeric
heterochromatin" evidence=ISO] [GO:0006302 "double-strand break
repair" evidence=ISO] [GO:0006333 "chromatin assembly or
disassembly" evidence=ISO] [GO:0006337 "nucleosome disassembly"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0016572 "histone phosphorylation" evidence=ISO]
[GO:0032947 "protein complex scaffold" evidence=ISO] [GO:0034725
"DNA replication-dependent nucleosome disassembly" evidence=ISO]
[GO:0035173 "histone kinase activity" evidence=ISO] [GO:0042393
"histone binding" evidence=ISO] [GO:0042809 "vitamin D receptor
binding" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0048096 "chromatin-mediated
maintenance of transcription" evidence=ISO] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISO] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0071884 "vitamin D receptor activator activity"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 RGD:1597089 GO:GO:0003007 GO:GO:0003682 GO:GO:0004713
GO:GO:0043596 GO:GO:0006302 GO:GO:0005721 GO:GO:0000793
GO:GO:0048096 GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 OrthoDB:EOG4MKNFK GO:GO:0071778 GO:GO:0035173
GO:GO:0071884 GO:GO:0034725 UniGene:Rn.7043 EMBL:DQ294690
EMBL:DQ294691 IPI:IPI00370333 STRING:Q2V6G6 UCSC:RGD:1597089
HOGENOM:HOG000095180 InParanoid:Q2V6G6 Genevestigator:Q2V6G6
Uniprot:Q2V6G6
Length = 118
Score = 98 (39.6 bits), Expect = 0.00042, P = 0.00042
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 491 SRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHI 547
+R + DYY+VI P+D + + +K Y + E + D Q+F NA YN SH+
Sbjct: 4 TRDEAEDYYDVIDHPMDFQTMQNKCSCGNYRSVQEFLTDVKQVFANAELYNCRGSHV 60
>UNIPROTKB|E9PSF3 [details] [associations]
symbol:BRPF3 "Bromodomain and PHD finger-containing protein
3" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR019542 Pfam:PF10513 EMBL:Z84485
HGNC:HGNC:14256 ChiTaRS:BRPF3 IPI:IPI00974109
ProteinModelPortal:E9PSF3 SMR:E9PSF3 Ensembl:ENST00000449261
ArrayExpress:E9PSF3 Bgee:E9PSF3 Uniprot:E9PSF3
Length = 821
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 455 VTAASLQKMRILYNTI-KETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIAS 513
V A+++ + +N + + T + + +HIF + + PDY E I KP+D +
Sbjct: 582 VQQAAMELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRR 641
Query: 514 KLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSV 572
KL + Y L+E DF + N KYN D+ ++ A+ L+ + H R +++
Sbjct: 642 KLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENI 700
>UNIPROTKB|E7ETD6 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC006534 EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581
ChiTaRS:BPTF IPI:IPI00024532 ProteinModelPortal:E7ETD6
Ensembl:ENST00000424123 ArrayExpress:E7ETD6 Uniprot:E7ETD6
Length = 2764
Score = 139 (54.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 467 YNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEM 526
Y +K +++ F +D PDYY VI++P+D+ + +++ YE L E
Sbjct: 2651 YEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEF 2710
Query: 527 VADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQ 560
VAD ++FDN YN DS Y+ A L+ +Q
Sbjct: 2711 VADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQ 2744
Score = 43 (20.2 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 18/93 (19%), Positives = 40/93 (43%)
Query: 191 DEYDDLSDFQADIELLVKNAKTFYKRNSQEHRDAQELMELFHSTRNKLLNPQSHEGTSQK 250
+++++ + + LL + R+S E + + + +T P+S+ +Q
Sbjct: 1460 EDFNERNSSETKSHLLSSSDAEGNYRDSLETLPSTKESDSTQTTTPSASCPESNS-VNQV 1518
Query: 251 RSMDFMMASETEDSRDSSICTEDEQNQCEDLFN 283
M+ + SE + S I +E+E N D +
Sbjct: 1519 EDME-IETSEVKKVTSSPITSEEESNLSNDFID 1550
Score = 42 (19.8 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 258 ASETEDSRDSSICTEDEQNQCED 280
A ET+DS D EDE + +D
Sbjct: 13 AEETQDSEDDE---EDEMEEDDD 32
Score = 40 (19.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 14/75 (18%), Positives = 28/75 (37%)
Query: 215 KRNSQEHRDAQELMELFHSTRNKLLNPQSHE----GT-----SQKRSMDFMMASETEDSR 265
K N E+ D + + S + + P S + G+ + + MD +E +D
Sbjct: 926 KNNMDENMDESDKRKCSRSPKKIKIEPDSEKDEVKGSDAAKGADQNEMDISKITEKKDQD 985
Query: 266 DSSICTEDEQNQCED 280
+ D C++
Sbjct: 986 VKELLDSDSDKPCKE 1000
>UNIPROTKB|B7ZLN5 [details] [associations]
symbol:BRPF3 "Bromodomain and PHD finger-containing protein
3" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR000313 PROSITE:PS50812
HOVERGEN:HBG004895 InterPro:IPR019542 Pfam:PF10513 SMART:SM00293
EMBL:Z84485 UniGene:Hs.520096 HGNC:HGNC:14256 ChiTaRS:BRPF3
EMBL:BC143918 IPI:IPI00873538 SMR:B7ZLN5 STRING:B7ZLN5
Ensembl:ENST00000443324 Ensembl:ENST00000534694 UCSC:uc011dtk.2
Uniprot:B7ZLN5
Length = 871
Score = 124 (48.7 bits), Expect = 0.00047, P = 0.00047
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 455 VTAASLQKMRILYNTI-KETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIAS 513
V A+++ + +N + + T + + +HIF + + PDY E I KP+D +
Sbjct: 582 VQQAAMELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRR 641
Query: 514 KLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSV 572
KL + Y L+E DF + N KYN D+ ++ A+ L+ + H R +++
Sbjct: 642 KLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENI 700
>UNIPROTKB|E1BDQ2 [details] [associations]
symbol:E1BDQ2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005739
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 Gene3D:1.20.920.10
SUPFAM:SSF47370 GeneTree:ENSGT00530000064262 EMBL:DAAA02020392
IPI:IPI00705181 Ensembl:ENSBTAT00000011535 OMA:NEISMII
Uniprot:E1BDQ2
Length = 1169
Score = 134 (52.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 39/163 (23%), Positives = 77/163 (47%)
Query: 244 HEGTSQKRSMDFMMASETEDSRDSSICTEDEQN-QCEDLFN-AVMTSTDADSRPLHEVFQ 301
H T Q ++ + S S+ S+C+ED++ Q + ++ A+M A + +
Sbjct: 675 HNATLQSHTLADSIPSSPASSQ-FSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVF 733
Query: 302 LLP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
L P + P Y+ ++ P+DL TI + I++G S + ++D++LM +NA +N
Sbjct: 734 LQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHD 793
Query: 361 IYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQS 403
+Y A +++ V + + + I +K +RG S
Sbjct: 794 VYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDS 836
Score = 40 (19.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 93 PKRKKIDPSDAMQQIYDVI 111
PKRK+ + + ++ + DVI
Sbjct: 78 PKRKRGEKGEVVETVEDVI 96
>UNIPROTKB|F1N1C9 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00700000104382 OMA:MTGNNLP InterPro:IPR011044
SUPFAM:SSF50969 EMBL:DAAA02072255 IPI:IPI00686367
Ensembl:ENSBTAT00000021597 Uniprot:F1N1C9
Length = 1658
Score = 106 (42.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAK 366
YP Y V+ P DL TI RR+++ Y + + ++ + NA TFNEP S I K AK
Sbjct: 1031 YPLYCTVVAYPTDLNTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAK 1088
Score = 72 (30.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKY-NEPDSHIYKDALSLQ 555
DY++VI P+D + L Y E D Q+F N+ Y + S IY L L
Sbjct: 1217 DYHDVIDTPMDFSTVKETLETGNYGSPLEFYKDVRQIFSNSKAYTSNKKSRIYSMTLRLS 1276
Query: 556 RI 557
+
Sbjct: 1277 AL 1278
>UNIPROTKB|Q6GLP7 [details] [associations]
symbol:brd9 "Bromodomain-containing protein 9" species:8355
"Xenopus laevis" [GO:0070577 "histone acetyl-lysine binding"
evidence=ISS] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0006355 GO:GO:0006351
GO:GO:0016568 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 KO:K11723 InterPro:IPR021900
Pfam:PF12024 CTD:65980 HOVERGEN:HBG107536 EMBL:BC074412
RefSeq:NP_001086274.1 UniGene:Xl.13609 ProteinModelPortal:Q6GLP7
SMR:Q6GLP7 GeneID:444703 KEGG:xla:444703 Xenbase:XB-GENE-969476
Uniprot:Q6GLP7
Length = 527
Score = 121 (47.7 bits), Expect = 0.00051, P = 0.00051
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQ 555
P Y+ +I+ P+D + K+ ++Y+ + E ADF M DNA YN P++ YK A L
Sbjct: 113 PGYFMIIKNPMDFSTMKEKISQDEYKSVTEFKADFKLMCDNAMTYNRPETVYYKLAKKLL 172
Query: 556 R--IVLQTKMHLREDEDSVPDVPAAVQELLTSLFTSVYNHQKQ-CLGSFHVLNVDNKPL 611
+ +K L +E + + P + E++ V K+ F V+ D +
Sbjct: 173 HTGFKMMSKAALLGNEVTTTEEP--IPEIIMPTAAEVVKKSKKPSKDMFRVMEEDQSSI 229
>UNIPROTKB|Q17RB6 [details] [associations]
symbol:BRPF3 "BRPF3 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR000313 PROSITE:PS50812 HOGENOM:HOG000000705
HOVERGEN:HBG004895 InterPro:IPR019542 Pfam:PF10513 SMART:SM00293
EMBL:Z84485 UniGene:Hs.520096 HGNC:HGNC:14256 ChiTaRS:BRPF3
EMBL:BC117387 EMBL:BC143917 IPI:IPI00879985 SMR:Q17RB6
IntAct:Q17RB6 STRING:Q17RB6 Ensembl:ENST00000339717
Ensembl:ENST00000543502 UCSC:uc010jwb.3 Uniprot:Q17RB6
Length = 935
Score = 124 (48.7 bits), Expect = 0.00052, P = 0.00052
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 455 VTAASLQKMRILYNTI-KETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIAS 513
V A+++ + +N + + T + + +HIF + + PDY E I KP+D +
Sbjct: 582 VQQAAMELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRR 641
Query: 514 KLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSV 572
KL + Y L+E DF + N KYN D+ ++ A+ L+ + H R +++
Sbjct: 642 KLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENI 700
>UNIPROTKB|F1PQZ8 [details] [associations]
symbol:BRD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043968 "histone H2A acetylation"
evidence=IEA] [GO:0043967 "histone H4 acetylation" evidence=IEA]
[GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001487
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0005739 GO:GO:0035267 GO:GO:0043968 GO:GO:0043967
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00530000064262
EMBL:AAEX03007811 EMBL:AAEX03007812 Ensembl:ENSCAFT00000001853
Uniprot:F1PQZ8
Length = 1223
Score = 134 (52.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 39/163 (23%), Positives = 77/163 (47%)
Query: 244 HEGTSQKRSMDFMMASETEDSRDSSICTEDEQN-QCEDLFN-AVMTSTDADSRPLHEVFQ 301
H T Q ++ + S S+ S+C+ED++ Q + ++ A+M A + +
Sbjct: 747 HNATLQSHTLADSIPSSPASSQ-FSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVF 805
Query: 302 LLP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQ 360
L P + P Y+ ++ P+DL TI + I++G S + ++D++LM +NA +N
Sbjct: 806 LQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHD 865
Query: 361 IYKDAKALKKLVQTKKMEIEQGKFTPAGKSERIRSKRIRGGQS 403
+Y A +++ V + + + I +K +RG S
Sbjct: 866 VYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDS 908
Score = 40 (19.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 93 PKRKKIDPSDAMQQIYDVI 111
PKRK+ + + ++ + DVI
Sbjct: 78 PKRKRGEKGEVVETVEDVI 96
>ZFIN|ZDB-GENE-060503-207 [details] [associations]
symbol:kat2b "K(lysine) acetyltransferase 2B"
species:7955 "Danio rerio" [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA]
[GO:0008080 "N-acetyltransferase activity" evidence=IEA]
InterPro:IPR000182 InterPro:IPR001487 InterPro:IPR009464
InterPro:IPR016376 Pfam:PF00439 Pfam:PF06466 Pfam:PF13508
PIRSF:PIRSF003048 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51186
SMART:SM00297 ZFIN:ZDB-GENE-060503-207 GO:GO:0005634 GO:GO:0006355
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0004402 KO:K06062
GeneTree:ENSGT00660000095339 HOGENOM:HOG000007151 OrthoDB:EOG4F1X2G
HOVERGEN:HBG051710 CTD:8850 OMA:TISYNST EMBL:BX957344 EMBL:BX950869
IPI:IPI00503213 RefSeq:NP_001038499.1 UniGene:Dr.97337 SMR:Q1LUC3
Ensembl:ENSDART00000090757 GeneID:563942 KEGG:dre:563942
NextBio:20885147 Uniprot:Q1LUC3
Length = 796
Score = 126 (49.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 29/98 (29%), Positives = 51/98 (52%)
Query: 466 LYNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDE 525
LY+T+K + F +++ P YY+VIR P+D++ ++ +L+ Y
Sbjct: 692 LYSTLKNILTQVKSHPNAWPFMEPVKKNEAPGYYQVIRFPMDLKTMSERLKSRYYTTRKL 751
Query: 526 MVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKM 563
+AD ++F N +YN P+S YK A L++ TK+
Sbjct: 752 FMADMQRIFTNCREYNPPESEYYKCANLLEKF-FYTKI 788
Score = 44 (20.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 328 RIQDGKYAS-LGDMEKDLILMTK-NACT-FNEPGSQIYKDAKALKKLVQTKKMEIEQ 381
++ KY + D E ++ + N C + E I K + +KKL++ K+ +I +
Sbjct: 593 KVPKSKYVGYIKDYEGATLMGCELNPCIPYTEFSVIIKKQKEIIKKLIERKQAQIRK 649
>ZFIN|ZDB-GENE-040724-145 [details] [associations]
symbol:trim66 "tripartite motif containing 66"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 ZFIN:ZDB-GENE-040724-145
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GeneTree:ENSGT00530000062982 EMBL:BX323591
IPI:IPI00516161 Ensembl:ENSDART00000076510 Uniprot:F1QYE4
Length = 1119
Score = 131 (51.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 498 YYEVIRKPVDMEMIASKLRYNQYEHL---DEMVADFIQMFDNACKYNEPDSHIYKDALSL 554
YY++I+KP+D+ +I ++L N + H E VAD + MF N K+N PDS + + SL
Sbjct: 1008 YYQIIKKPMDLSVIRNRLGSNSHTHYCSPQEFVADVLLMFKNCAKFNYPDSEVAQAGHSL 1067
Query: 555 QRIVLQTKMHLREDEDSVPDVPAA-VQELLTSLFT 588
Q + + D S PD +EL ++ T
Sbjct: 1068 QSFFISKLREVFPDL-SCPDSDTEDYEELERAMMT 1101
Score = 42 (19.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 219 QEHRDAQELMELFHSTRNKLLNPQSHEGTSQKRSMDFMMAS----ETEDSRDSSICTEDE 274
QE + + + +++ +L P + E S D + A +TE +R++ + E E
Sbjct: 761 QEFCNINQESDALSVSKDAVLQPDAEEIHSDDSPSDLISAPGSDFQTESTREADV--ESE 818
Query: 275 QNQCEDLFNAVMTSTDADSRPLHE 298
Q +L V + +D S L E
Sbjct: 819 LPQESEL--QVESESDVISEQLPE 840
>UNIPROTKB|Q6RI45 [details] [associations]
symbol:BRWD3 "Bromodomain and WD repeat-containing protein
3" species:9606 "Homo sapiens" [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
EMBL:AY497046 EMBL:AY497047 EMBL:AY497048 EMBL:AY497049
EMBL:AY497050 EMBL:AY497051 EMBL:AY497052 EMBL:AY497053
EMBL:AY497054 EMBL:AY497055 EMBL:AY497056 EMBL:AY497057
EMBL:AY497058 EMBL:AY497059 EMBL:AY497060 EMBL:AL590031
EMBL:AL512504 EMBL:AL669934 EMBL:BC111490 EMBL:AK095887
IPI:IPI00167547 IPI:IPI00843754 IPI:IPI00844073 IPI:IPI00844236
IPI:IPI00844349 RefSeq:NP_694984.4 UniGene:Hs.147027
UniGene:Hs.613180 HSSP:P16649 ProteinModelPortal:Q6RI45
IntAct:Q6RI45 STRING:Q6RI45 PhosphoSite:Q6RI45 PaxDb:Q6RI45
PRIDE:Q6RI45 Ensembl:ENST00000373275 GeneID:254065 KEGG:hsa:254065
UCSC:uc004edo.3 CTD:254065 GeneCards:GC0XM079926 HGNC:HGNC:17342
HPA:HPA012802 MIM:300553 MIM:300659 neXtProt:NX_Q6RI45 Orphanet:323
PharmGKB:PA134900775 HOVERGEN:HBG108248 InParanoid:Q6RI45
OMA:MTGNNLP OrthoDB:EOG4X3H0H GenomeRNAi:254065 NextBio:92253
Bgee:Q6RI45 CleanEx:HS_BRWD3 Genevestigator:Q6RI45
InterPro:IPR011044 SUPFAM:SSF50969 Uniprot:Q6RI45
Length = 1802
Score = 106 (42.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAK 366
YP Y V+ P DL TI RR+++ Y + + ++ + NA TFNEP S I K AK
Sbjct: 1175 YPLYCTVVAYPTDLNTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAK 1232
Score = 72 (30.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 497 DYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKY-NEPDSHIYKDALSLQ 555
DY +VI PVD + L Y E D Q+F+N+ Y + S IY L L
Sbjct: 1361 DYQDVIDTPVDFSTVKETLEAGNYGSPLEFYKDVRQIFNNSKAYTSNKKSRIYSMMLRLS 1420
Query: 556 RI 557
+
Sbjct: 1421 AL 1422
>UNIPROTKB|F1LX76 [details] [associations]
symbol:F1LX76 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00361297 Ensembl:ENSRNOT00000020904 ArrayExpress:F1LX76
Uniprot:F1LX76
Length = 2894
Score = 140 (54.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 467 YNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEM 526
Y +K +++ F +D PDYY VI++P+D+ + +++ YE L E
Sbjct: 2781 YEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERIQKRYYEKLTEF 2840
Query: 527 VADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQ 560
VAD ++FDN YN DS Y+ A L+ +Q
Sbjct: 2841 VADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQ 2874
Score = 41 (19.5 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 247 TSQKRSMDFMM----ASETEDSRDSSICTEDEQNQCED 280
TS +R+++ ++ SE +D + + EDE+ + ED
Sbjct: 92 TSARRAVNKVVYDDHESEDDDEEEDMVSEEDEEEE-ED 128
>UNIPROTKB|I3LP77 [details] [associations]
symbol:I3LP77 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 OMA:DEFYYPK Ensembl:ENSSSCT00000032456
Uniprot:I3LP77
Length = 1549
Score = 90 (36.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 27/102 (26%), Positives = 51/102 (50%)
Query: 283 NAVMTSTDADSRPLHEVFQL-LP-SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDM 340
++++ S D R L + P + K +YY +I P+DL+T+ ++ Y S +
Sbjct: 1350 SSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEF 1409
Query: 341 EKDLILMTKNACTFNEPGSQIYKD--AKALKKLVQTKKMEIE 380
+ L L+ KN+ T+N+ G+ D ++++ L K E E
Sbjct: 1410 REHLELIVKNSATYND-GTHADTDXISQSMLDLCDEKLKEKE 1450
Score = 87 (35.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 496 PDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYN 541
PDYY+VI P+D+E I + ++Y+ + + D + N+ KYN
Sbjct: 1503 PDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYN 1548
>UNIPROTKB|E9PI60 [details] [associations]
symbol:BRPF3 "Bromodomain and PHD finger-containing protein
3" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR019542 Pfam:PF10513 EMBL:Z84485
HGNC:HGNC:14256 ChiTaRS:BRPF3 IPI:IPI00977223
ProteinModelPortal:E9PI60 SMR:E9PI60 Ensembl:ENST00000534400
ArrayExpress:E9PI60 Bgee:E9PI60 Uniprot:E9PI60
Length = 1106
Score = 124 (48.7 bits), Expect = 0.00063, P = 0.00063
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 455 VTAASLQKMRILYNTI-KETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIAS 513
V A+++ + +N + + T + + +HIF + + PDY E I KP+D +
Sbjct: 582 VQQAAMELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRR 641
Query: 514 KLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSV 572
KL + Y L+E DF + N KYN D+ ++ A+ L+ + H R +++
Sbjct: 642 KLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENI 700
>UNIPROTKB|F1M1V5 [details] [associations]
symbol:F1M1V5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00782357 Ensembl:ENSRNOT00000055099 ArrayExpress:F1M1V5
Uniprot:F1M1V5
Length = 2952
Score = 140 (54.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 467 YNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEM 526
Y +K +++ F +D PDYY VI++P+D+ + +++ YE L E
Sbjct: 2839 YEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERIQKRYYEKLTEF 2898
Query: 527 VADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQ 560
VAD ++FDN YN DS Y+ A L+ +Q
Sbjct: 2899 VADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQ 2932
Score = 41 (19.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 247 TSQKRSMDFMM----ASETEDSRDSSICTEDEQNQCED 280
TS +R+++ ++ SE +D + + EDE+ + ED
Sbjct: 92 TSARRAVNKVVYDDHESEDDDEEEDMVSEEDEEEE-ED 128
>UNIPROTKB|F1M1V4 [details] [associations]
symbol:F1M1V4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0007420 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0007492
GO:GO:0001892 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 GO:GO:0008094 IPI:IPI00949885
Ensembl:ENSRNOT00000055100 ArrayExpress:F1M1V4 Uniprot:F1M1V4
Length = 3013
Score = 140 (54.3 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 467 YNTIKETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEM 526
Y +K +++ F +D PDYY VI++P+D+ + +++ YE L E
Sbjct: 2900 YEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERIQKRYYEKLTEF 2959
Query: 527 VADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQ 560
VAD ++FDN YN DS Y+ A L+ +Q
Sbjct: 2960 VADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQ 2993
Score = 41 (19.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 247 TSQKRSMDFMM----ASETEDSRDSSICTEDEQNQCED 280
TS +R+++ ++ SE +D + + EDE+ + ED
Sbjct: 92 TSARRAVNKVVYDDHESEDDDEEEDMVSEEDEEEE-ED 128
>UNIPROTKB|Q9ULD4 [details] [associations]
symbol:BRPF3 "Bromodomain and PHD finger-containing protein
3" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0070776 "MOZ/MORF histone acetyltransferase
complex" evidence=IDA] [GO:0043966 "histone H3 acetylation"
evidence=IDA] [GO:0002576 "platelet degranulation" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_604
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0005829
GO:GO:0005576 GO:GO:0030168 EMBL:CH471081 GO:GO:0046872
GO:GO:0008270 GO:GO:0002576 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR000313 PROSITE:PS50812 HOGENOM:HOG000000705
HOVERGEN:HBG004895 GO:GO:0070776 GO:GO:0043966 InterPro:IPR019542
Pfam:PF10513 SMART:SM00293 EMBL:AB033112 EMBL:Z84485
IPI:IPI00008054 RefSeq:NP_056510.2 UniGene:Hs.520096 PDB:3PFS
PDBsum:3PFS ProteinModelPortal:Q9ULD4 SMR:Q9ULD4 IntAct:Q9ULD4
MINT:MINT-7241520 STRING:Q9ULD4 PhosphoSite:Q9ULD4 DMDM:71153496
PaxDb:Q9ULD4 PRIDE:Q9ULD4 Ensembl:ENST00000357641 GeneID:27154
KEGG:hsa:27154 UCSC:uc003olv.4 CTD:27154 GeneCards:GC06P036211
H-InvDB:HIX0005816 H-InvDB:HIX0200828 HGNC:HGNC:14256 HPA:HPA022787
neXtProt:NX_Q9ULD4 PharmGKB:PA25425 InParanoid:Q9ULD4 KO:K11350
OMA:SDNGINR OrthoDB:EOG45B1DQ PhylomeDB:Q9ULD4 ChiTaRS:BRPF3
GenomeRNAi:27154 NextBio:49923 ArrayExpress:Q9ULD4 Bgee:Q9ULD4
CleanEx:HS_BRPF3 Genevestigator:Q9ULD4 GermOnline:ENSG00000096070
Uniprot:Q9ULD4
Length = 1205
Score = 124 (48.7 bits), Expect = 0.00070, P = 0.00070
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 455 VTAASLQKMRILYNTI-KETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIAS 513
V A+++ + +N + + T + + +HIF + + PDY E I KP+D +
Sbjct: 582 VQQAAMELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRR 641
Query: 514 KLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSV 572
KL + Y L+E DF + N KYN D+ ++ A+ L+ + H R +++
Sbjct: 642 KLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENI 700
>TAIR|locus:2142305 [details] [associations]
symbol:AT5G46550 "AT5G46550" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351
EMBL:AB028605 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 EMBL:AK118168 IPI:IPI00546887 RefSeq:NP_199467.2
UniGene:At.29948 HSSP:Q92830 ProteinModelPortal:Q9LS28 SMR:Q9LS28
PaxDb:Q9LS28 PRIDE:Q9LS28 EnsemblPlants:AT5G46550.1 GeneID:834698
KEGG:ath:AT5G46550 TAIR:At5g46550 HOGENOM:HOG000084378
InParanoid:Q9LS28 OMA:GRIICIC PhylomeDB:Q9LS28
ProtClustDB:CLSN2918357 Genevestigator:Q9LS28 Uniprot:Q9LS28
Length = 494
Score = 119 (46.9 bits), Expect = 0.00077, P = 0.00077
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 490 PSRHDYPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYK 549
P + + PDY+ VI+KP+D+ + SKL N Y + DE AD F NA YN + ++
Sbjct: 95 PVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYNPLWNEVHT 154
Query: 550 DALSLQRI 557
A + I
Sbjct: 155 IAKEINEI 162
>SGD|S000003484 [details] [associations]
symbol:GCN5 "Acetyltransferase, modifies N-terminal lysines
on histones H2B and H3" species:4932 "Saccharomyces cerevisiae"
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0008080 "N-acetyltransferase activity"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IDA;IPI] [GO:0016746 "transferase activity, transferring
acyl groups" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA;IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0010484 "H3 histone acetyltransferase activity"
evidence=IGI;IMP;IDA] [GO:0016573 "histone acetylation"
evidence=IGI;IDA;IMP] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0046695
"SLIK (SAGA-like) complex" evidence=IDA] [GO:0000775 "chromosome,
centromeric region" evidence=IDA] InterPro:IPR000182
InterPro:IPR001487 Pfam:PF00439 Pfam:PF00583 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51186 SMART:SM00297 SGD:S000003484
GO:GO:0000775 EMBL:BK006941 EMBL:X99228 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0003713 GO:GO:0000124
GO:GO:0005671 GO:GO:0046695 GO:GO:0034401 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0010484 GO:GO:0032968 HOGENOM:HOG000192257
KO:K06062 OMA:SVWMGYI OrthoDB:EOG412QF2 EMBL:X68628 EMBL:Z73037
EMBL:AY693215 PIR:S28051 RefSeq:NP_011768.1 PDB:1E6I PDB:1YGH
PDBsum:1E6I PDBsum:1YGH ProteinModelPortal:Q03330 SMR:Q03330
DIP:DIP-710N IntAct:Q03330 MINT:MINT-403059 STRING:Q03330
PaxDb:Q03330 EnsemblFungi:YGR252W GeneID:853167 KEGG:sce:YGR252W
CYGD:YGR252w GeneTree:ENSGT00660000095339 SABIO-RK:Q03330
ChEMBL:CHEMBL4669 EvolutionaryTrace:Q03330 NextBio:973282
Genevestigator:Q03330 GermOnline:YGR252W Uniprot:Q03330
Length = 439
Score = 118 (46.6 bits), Expect = 0.00083, P = 0.00083
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 305 SKKRYPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKD 364
+K+ P+YYD I P+DL T+ +++ KY + D D L+ N +N + YK
Sbjct: 357 NKEEVPDYYDFIKEPMDLSTMEIKLESNKYQKMEDFIYDARLVFNNCRMYNGENTSYYKY 416
Query: 365 AKALKKLVQTKKMEIEQ 381
A L+K K EI +
Sbjct: 417 ANRLEKFFNNKVKEIPE 433
>UNIPROTKB|F8W0H2 [details] [associations]
symbol:BRDT "Bromodomain testis-specific protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0006338 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC114486
HGNC:HGNC:1105 ChiTaRS:BRDT IPI:IPI00878644
ProteinModelPortal:F8W0H2 SMR:F8W0H2 Ensembl:ENST00000552654
ArrayExpress:F8W0H2 Bgee:F8W0H2 Uniprot:F8W0H2
Length = 63
Score = 95 (38.5 bits), Expect = 0.00088, P = 0.00088
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 320 IDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAKALKKLVQTKKMEI 379
+DL TI +R+++ YA + +D M N +N+PG I A+AL+KL K ++
Sbjct: 1 MDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 60
Query: 380 EQ 381
Q
Sbjct: 61 PQ 62
>UNIPROTKB|E2RK73 [details] [associations]
symbol:BRPF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR000313 PROSITE:PS50812
InterPro:IPR019542 Pfam:PF10513 SMART:SM00293 CTD:27154 KO:K11350
GeneTree:ENSGT00690000101689 EMBL:AAEX03008281 RefSeq:XP_538883.3
Ensembl:ENSCAFT00000002149 GeneID:481762 KEGG:cfa:481762
NextBio:20856501 Uniprot:E2RK73
Length = 1207
Score = 123 (48.4 bits), Expect = 0.00090, P = 0.00090
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 455 VTAASLQKMRILYNTI-KETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIAS 513
+ A+++ + +N + + T + + +HIF + + PDY E I KP+D +
Sbjct: 583 IQQAAMELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRR 642
Query: 514 KLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSV 572
KL + Y L+E DF + N KYN D+ ++ A+ L+ + H R +++
Sbjct: 643 KLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENI 701
>UNIPROTKB|J9NVN9 [details] [associations]
symbol:BRPF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR000313 PROSITE:PS50812
InterPro:IPR019542 Pfam:PF10513 SMART:SM00293 OMA:SDNGINR
GeneTree:ENSGT00690000101689 EMBL:AAEX03008281
Ensembl:ENSCAFT00000047147 Uniprot:J9NVN9
Length = 1209
Score = 123 (48.4 bits), Expect = 0.00090, P = 0.00090
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 455 VTAASLQKMRILYNTI-KETCEPKTGRQLSHIFQRLPSRHDYPDYYEVIRKPVDMEMIAS 513
+ A+++ + +N + + T + + +HIF + + PDY E I KP+D +
Sbjct: 585 IQQAAMELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRR 644
Query: 514 KLRYNQYEHLDEMVADFIQMFDNACKYNEPDSHIYKDALSLQRIVLQTKMHLREDEDSV 572
KL + Y L+E DF + N KYN D+ ++ A+ L+ + H R +++
Sbjct: 645 KLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENI 703
>POMBASE|SPBC25H2.11c [details] [associations]
symbol:spt7 "SAGA complex bromodomain subunit Spt7"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=EXP] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=ISO] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IEA] InterPro:IPR001487 InterPro:IPR027119 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 PomBase:SPBC25H2.11c
EMBL:CU329671 GO:GO:0016573 GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0000790 GO:GO:0000124 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
HSSP:Q92831 PIR:T40006 RefSeq:NP_596356.2
EnsemblFungi:SPBC25H2.11c.1 GeneID:2540408 OrthoDB:EOG4MSH6B
NextBio:20801535 InterPro:IPR006565 PANTHER:PTHR22880:SF33
Pfam:PF07524 SMART:SM00576 Uniprot:P87152
Length = 992
Score = 122 (48.0 bits), Expect = 0.00092, P = 0.00092
Identities = 60/227 (26%), Positives = 99/227 (43%)
Query: 155 LKTDEYDDL--SDFQADIELLVVTNPIDFIKIQQKLKTDE--YDDLSDFQADIELLVKNA 210
LK+ + DD+ S F A IE + I F + L+ D +++ F+ + + N
Sbjct: 183 LKSVDIDDMDTSGFAA-IESNKALSNISFNYVYYTLENDSENINEVKKFEDEEDTSTPNT 241
Query: 211 KTFYKRNSQ-EHRDAQELMELFHSTRN--KLLNPQSHEGTSQK-RSMDFMMASETED-SR 265
+F +S + D L F S + K L Q EG K + D + D +
Sbjct: 242 SSFQNNSSSLDLSDNLSLNSKFGSLTSSFKYLL-QYLEGNRSKINATDADVKQLLSDVKK 300
Query: 266 DSSICTEDEQNQCEDLFNAV-MTSTDADSRPLHEV-FQLLPSKKRYPEYYDVIDVPIDLR 323
+ S D++ E+L+ A + S H + F SK+ P+YY VI P+DL
Sbjct: 301 NKSKWANDQRIGQEELYEAAEKVVLELRSYTEHSLAFLTKVSKRDAPDYYTVIKEPMDLG 360
Query: 324 TIARRIQDGKYASLGDMEKDLILMTKNACTFNE-PGSQIYKDAKALK 369
TI R +++ Y S + DL+L+ N +N P + A+ +K
Sbjct: 361 TILRNLKNLHYNSKKEFVHDLMLIWSNCFLYNSHPDHPLRVHAQFMK 407
>RGD|1559445 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10116 "Rattus norvegicus" [GO:0007010 "cytoskeleton
organization" evidence=ISO] [GO:0008360 "regulation of cell shape"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 RGD:1559445 GO:GO:0007010
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00700000104382
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969
IPI:IPI00361975 ProteinModelPortal:D3Z8C5
Ensembl:ENSRNOT00000050336 UCSC:RGD:1559445 Uniprot:D3Z8C5
Length = 1799
Score = 102 (41.0 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 309 YPEYYDVIDVPIDLRTIARRIQDGKYASLGDMEKDLILMTKNACTFNEPGSQIYKDAK 366
YP Y V+ P DL TI +R+++ Y + + ++ + NA TFNEP S I K AK
Sbjct: 1173 YPLYCTVVAYPTDLNTIKQRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAK 1230
Score = 74 (31.1 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 21/72 (29%), Positives = 30/72 (41%)
Query: 490 PSRHD---YPDYYEVIRKPVDMEMIASKLRYNQYEHLDEMVADFIQMFDNACKY-NEPDS 545
P R D DY +V+ P+D + L Y+ E D Q+F N+ Y + S
Sbjct: 1348 PDRQDPSLSEDYQDVVDTPMDFSTVKETLESGNYDSPLEFYKDVRQIFSNSKAYTSNKKS 1407
Query: 546 HIYKDALSLQRI 557
IY L L +
Sbjct: 1408 RIYSMTLRLSAL 1419
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 653 591 0.00084 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 201
No. of states in DFA: 610 (65 KB)
Total size of DFA: 315 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 55.99u 0.20s 56.19t Elapsed: 00:00:05
Total cpu time: 56.05u 0.20s 56.25t Elapsed: 00:00:05
Start: Thu Aug 15 12:27:49 2013 End: Thu Aug 15 12:27:54 2013
WARNINGS ISSUED: 1