BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15469
(297 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditis elegans GN=lam-2 PE=1
SV=3
Length = 1633
Score = 339 bits (869), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/300 (56%), Positives = 208/300 (69%), Gaps = 12/300 (4%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYED----THPV 59
RC+P F NAAF+ V+ TNTCG + +PT+FCVQSG + C+ C + +HP
Sbjct: 50 RCVPDFVNAAFNLEVQVTNTCGTK----RPTKFCVQSGHTGQRSVCETCDDRHEGFSHPA 105
Query: 60 RYLTD--LSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
+YLTD + N TWWQS TM +G Q+P N+TL GK+FD+TYVRL F SPRPESF IY
Sbjct: 106 KYLTDFNVGNNETWWQSDTMQEGQQYPTTTNLTLVLGKSFDITYVRLKFISPRPESFTIY 165
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
KKT+ +S W P+QFYS SC+ TYGL D + T CT E+SD+SP+TGG + F+
Sbjct: 166 KKTHTDSEWEPWQFYSGSCRATYGLSDRAPILPGNEAT-AQCTKEFSDISPITGGNIAFS 224
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQ++VTA+ IRI+L+R+NTF DE+F DP VLRSY+YAI+D +VG
Sbjct: 225 TLEGRPSAHAFEESEVLQKWVTASAIRISLNRMNTFGDEVFKDPQVLRSYYYAISDFAVG 284
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SDDANEC 296
RCKCNGHASEC DG R VCRCEHNT G DCNEC PFYND PWR S +ANEC
Sbjct: 285 GRCKCNGHASECVGSSSVDGENRLVCRCEHNTQGADCNECLPFYNDRPWRSGTSVEANEC 344
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 239 RCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDANEC 296
+C C+ H++ C S C CEHNTAG C CA Y + +D +C
Sbjct: 735 KCDCHNHSNSCEAESGS-------CICEHNTAGDTCERCARGYYGDALQGTEEDCQKC 785
>sp|P15215|LAMC1_DROME Laminin subunit gamma-1 OS=Drosophila melanogaster GN=LanB2 PE=2
SV=2
Length = 1639
Score = 336 bits (861), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/297 (54%), Positives = 206/297 (69%), Gaps = 8/297 (2%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLT 63
+C+P F NAA+ +ESTNTCG QN FC+Q+ N C++C + H +LT
Sbjct: 66 KCLPEFINAAYQLQIESTNTCGEQN----DNHFCIQTMNQNHKN-CEFCKYNDHNPSFLT 120
Query: 64 DLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTY 121
DL + + TWWQS TM++G+Q PN VN+TL GK++D+TYVR+LF SPRPESF IYK+T
Sbjct: 121 DLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDITYVRILFRSPRPESFTIYKRTS 180
Query: 122 ENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEG 181
E+ W P+QFYSA+C++TY LPD + + + + CTSEYSD+SPL G + F+TLEG
Sbjct: 181 ESGPWIPYQFYSATCRDTYSLPDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFSTLEG 240
Query: 182 RYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCK 241
R F + LQE+VTAT+IRITLDRLNTF DELF D VL+SYFYAI+DI+VGARCK
Sbjct: 241 RPSGINFERSGELQEWVTATDIRITLDRLNTFGDELFGDSQVLKSYFYAISDIAVGARCK 300
Query: 242 CNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SDDANECR 297
CNGHAS+C G VC C HNT GPDC+ C P YND W+R+ S + NEC+
Sbjct: 301 CNGHASKCVPSTGMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECK 357
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAP-FYNDA 284
C C+GHA C D T R C C+HNT G +C++CA FY +A
Sbjct: 744 CDCHGHADIC------DSETGR-CICQHNTHGDNCDQCAKGFYGNA 782
>sp|A0JP86|LAMC1_XENTR Laminin subunit gamma-1 OS=Xenopus tropicalis GN=lamc1 PE=2 SV=1
Length = 1592
Score = 314 bits (805), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/300 (52%), Positives = 205/300 (68%), Gaps = 16/300 (5%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYC----YEDTHPV 59
RC+P F NAAF+A+V +TNTCG P +CVQ+G +C C + H
Sbjct: 32 RCMPEFVNAAFNATVVATNTCGTP-----PEEYCVQTGVTGVTKSCHICDSGQFHLQHGA 86
Query: 60 RYLTDLSNTT--TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
YLTD +N TWWQS TM G+Q+P+ +N+TL GK FD+TYVRL F + RPESFA+Y
Sbjct: 87 EYLTDYNNQAEITWWQSQTMLAGIQYPSTINLTLHLGKAFDITYVRLKFHTSRPESFALY 146
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K+T+E+ W P+Q+YS SC++TY + + + + + CT E+SD+SPLTGG V F+
Sbjct: 147 KRTHEDGPWIPYQYYSGSCEKTYQKFNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFS 206
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQE+VTAT+IR+TL+RLNTF DE+F DP VL+SY+YAI+D +VG
Sbjct: 207 TLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFSDPKVLKSYYYAISDFAVG 266
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDA-NEC 296
RCKCNGHASEC VR + VC C+HNT G DC +C PFYND PWRR++ D+ NEC
Sbjct: 267 GRCKCNGHASEC--VRNE--FEKIVCNCKHNTFGSDCEKCLPFYNDRPWRRSTADSPNEC 322
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAP-FYNDAPWRRASD 291
C CNGH+ C VC C+HNTAGP C C+ +Y D+ ASD
Sbjct: 707 CTCNGHSDTCD-------PESGVCDCQHNTAGPHCERCSEGYYGDSTTGSASD 752
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 240 CKCNGHASEC---PYVRQSDGSTRRVCRCEHNTAGPDCNECAPFY 281
C CNG + EC P + +S G C NT GP+C C Y
Sbjct: 325 CNCNGRSQECYFDPELYRSTGHGGHCTGCADNTDGPNCERCRENY 369
>sp|Q1LVF0|LAMC1_DANRE Laminin subunit gamma-1 OS=Danio rerio GN=lamc1 PE=2 SV=2
Length = 1593
Score = 312 bits (800), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/300 (52%), Positives = 202/300 (67%), Gaps = 16/300 (5%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDT----HPV 59
RC+P F NAAF+A+V +TNTCG P FCVQ+G +C C H
Sbjct: 33 RCMPEFVNAAFNATVVATNTCG-----SPPEEFCVQTGVTGVTKSCHICNAADPRLHHGA 87
Query: 60 RYLTDLSNTT--TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
YLTD + TWWQS TM G+Q+PN +N+TL GK+FD+TYVRL F + RPESFAIY
Sbjct: 88 VYLTDYNQPVQPTWWQSQTMLAGIQYPNSINLTLHLGKSFDITYVRLKFHTSRPESFAIY 147
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K++ E+ WTP+Q+YS SC++TY + + + + + CT E+SD+SPL GG V F+
Sbjct: 148 KRSSEDGPWTPYQYYSGSCEKTYSKNNRGFIRTGEDEQQALCTDEFSDISPLYGGNVAFS 207
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQ++VTAT+IR+TL+RLNTF DE+F DP VL+SY+YAI+D +VG
Sbjct: 208 TLEGRPSAYNFDNSPVLQDWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVG 267
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SDDANEC 296
RCKCNGHASEC S + VC C+HNT G DCN C PFYND PWRRA +++ NEC
Sbjct: 268 GRCKCNGHASECVKNEYS----KLVCNCKHNTEGADCNVCKPFYNDRPWRRATAENPNEC 323
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Query: 239 RCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAP-FYNDAPWRRASD 291
RC CNGH+ C D T +C C+HNTAG C C FY D+ +SD
Sbjct: 707 RCNCNGHSDTC------DPETG-MCNCQHNTAGLSCERCKDGFYGDSTVGSSSD 753
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 240 CKCNGHASEC---PYVRQSDGSTRRVCRCEHNTAGPDCNEC-APFYNDAPWRR 288
C CNG ++EC P + ++ G C NT GP C C A +Y +A +R
Sbjct: 326 CNCNGKSAECYFDPELYRATGHGGHCRNCADNTDGPKCERCLANYYREASGQR 378
>sp|P11047|LAMC1_HUMAN Laminin subunit gamma-1 OS=Homo sapiens GN=LAMC1 PE=1 SV=3
Length = 1609
Score = 309 bits (791), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 200/300 (66%), Gaps = 16/300 (5%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDT----HPV 59
RC+P F NAAF+ +V +TNTCG P +CVQ+G +C C H
Sbjct: 49 RCMPEFVNAAFNVTVVATNTCGTP-----PEEYCVQTGVTGVTKSCHLCDAGQPHLQHGA 103
Query: 60 RYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
+LTD +N TTWWQS TM GVQ+P+ +N+TL GK FD+TYVRL F + RPESFAIY
Sbjct: 104 AFLTDYNNQADTTWWQSQTMLAGVQYPSSINLTLHLGKAFDITYVRLKFHTSRPESFAIY 163
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K+T E+ W P+Q+YS SC+ TY + + + + CT E+SD+SPLTGG V F+
Sbjct: 164 KRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFS 223
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQE+VTAT+IR+TL+RLNTF DE+F DP VL+SY+YAI+D +VG
Sbjct: 224 TLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVG 283
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SDDANEC 296
RCKCNGHASEC + + VC C+HNT G DC +C PF+ND PWRRA ++ A+EC
Sbjct: 284 GRCKCNGHASEC----MKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASEC 339
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAP-FYNDAPWRRASD 291
C CNGH+ C D T VC C NTAGP C +C+ +Y D+ +SD
Sbjct: 724 CACNGHSETC------DPETG-VCNCRDNTAGPHCEKCSDGYYGDSTAGTSSD 769
>sp|Q9R0B6|LAMC3_MOUSE Laminin subunit gamma-3 OS=Mus musculus GN=Lamc3 PE=2 SV=2
Length = 1581
Score = 306 bits (785), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 154/302 (50%), Positives = 200/302 (66%), Gaps = 18/302 (5%)
Query: 3 NRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVR-- 60
RC+P FENAAF E+++TCG P FC G C C +D P R
Sbjct: 42 QRCLPEFENAAFGRRAEASHTCGRP-----PEDFCPHVGAPGAGLQCQRC-DDADPGRRH 95
Query: 61 ---YLTDLS--NTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFA 115
YLTD + +TWWQS +M GVQ+P VN+TL GK +++TYVRL F + RPESFA
Sbjct: 96 DASYLTDFHSPDDSTWWQSPSMAFGVQYPTSVNLTLSLGKAYEITYVRLKFHTSRPESFA 155
Query: 116 IYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVP 175
IYK+TY + W P+Q+YSASCQ+TYG P+ + + + + FCTSE+SD+SPL GG V
Sbjct: 156 IYKRTYASGPWEPYQYYSASCQKTYGRPEGHYLRPGEDERVAFCTSEFSDISPLNGGNVA 215
Query: 176 FATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADIS 235
F+TLEGR A F + LQE+VT+T+I I+LDRLNTF D++F DP VL+SY+YA++D S
Sbjct: 216 FSTLEGRPSAYNFEESPVLQEWVTSTDILISLDRLNTFGDDIFKDPRVLQSYYYAVSDFS 275
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SDDAN 294
VG RCKCNGHASEC + + + + CRC+HNT G DC C PF+ D PW R ++DAN
Sbjct: 276 VGGRCKCNGHASEC----EPNAAGQLACRCQHNTTGVDCERCLPFFQDRPWARGTAEDAN 331
Query: 295 EC 296
EC
Sbjct: 332 EC 333
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 240 CKCNGHASECPYVRQ---SDGSTRRVCRCEHNTAGPDCNECAPFY 281
C C+GH+ EC + R+ S G RC +T GP C C Y
Sbjct: 336 CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNY 380
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAP-FYNDAPWRRASDDANEC 296
C CN H + P +C C H+T GP C C P FY +A RA DD C
Sbjct: 719 CTCNQHGTCDPNTG--------ICLCGHHTEGPSCERCMPGFYGNAFSGRA-DDCQPC 767
>sp|P02468|LAMC1_MOUSE Laminin subunit gamma-1 OS=Mus musculus GN=Lamc1 PE=1 SV=2
Length = 1607
Score = 305 bits (782), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/296 (51%), Positives = 197/296 (66%), Gaps = 15/296 (5%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYC----YEDTHPV 59
RC+P F NAAF+ +V +TNTCG P +CVQ+G +C C H
Sbjct: 47 RCMPEFVNAAFNVTVVATNTCGTP-----PEEYCVQTGVTGVTKSCHLCDAGQQHLQHGA 101
Query: 60 RYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
+LTD +N TTWWQS TM GVQ+PN +N+TL GK FD+TYVRL F + RPESFAIY
Sbjct: 102 AFLTDYNNQADTTWWQSQTMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIY 161
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K+T E+ W P+Q+YS SC+ TY + + + + CT E+SD+SPLTGG V F+
Sbjct: 162 KRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFS 221
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQE+VTAT+IR+TL+RLNTF DE+F +P VL+SY+YAI+D +VG
Sbjct: 222 TLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNEPKVLKSYYYAISDFAVG 281
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDA 293
RCKCNGHASEC + + +C C+HNT G DC +C PF+ND PWRRA+ ++
Sbjct: 282 GRCKCNGHASECV----KNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAES 333
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECA-PFYNDAPWRRASD 291
C CNGH+ C D T VC C NTAGP C +C+ +Y D+ +SD
Sbjct: 722 CTCNGHSETC------DPETG-VCDCRDNTAGPHCEKCSDGYYGDSTLGTSSD 767
>sp|Q9Y6N6|LAMC3_HUMAN Laminin subunit gamma-3 OS=Homo sapiens GN=LAMC3 PE=1 SV=3
Length = 1575
Score = 301 bits (772), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/301 (49%), Positives = 196/301 (65%), Gaps = 16/301 (5%)
Query: 3 NRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYC----YEDTHP 58
RC+P FENAAF ++++TCG P FC G C C + H
Sbjct: 33 QRCLPVFENAAFGRLAQASHTCGSP-----PEDFCPHVGAAGAGAHCQRCDAADPQRHHN 87
Query: 59 VRYLTDL--SNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
YLTD + +TWWQS +M GVQ+P VNITL+ GK +++TYVRL F + RPESFAI
Sbjct: 88 ASYLTDFHSQDESTWWQSPSMAFGVQYPTSVNITLRLGKAYEITYVRLKFHTSRPESFAI 147
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK++ + W P+QFYSASCQ+TYG P+ + + + FCTSE+SD+SPL+GG V F
Sbjct: 148 YKRSRADGPWEPYQFYSASCQKTYGRPEGQYLRPGEDERVAFCTSEFSDISPLSGGNVAF 207
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISV 236
+TLEGR A F + LQE+VT+TE+ I+LDRLNTF D++F DP VL+SY+YA++D SV
Sbjct: 208 STLEGRPSAYNFEESPGLQEWVTSTELLISLDRLNTFGDDIFKDPKVLQSYYYAVSDFSV 267
Query: 237 GARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SDDANE 295
G RCKCNGHASEC D + + CRC+HNT G DC C PF+ D PW R ++ A+E
Sbjct: 268 GGRCKCNGHASEC----GPDVAGQLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAAHE 323
Query: 296 C 296
C
Sbjct: 324 C 324
Score = 34.7 bits (78), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDANEC 296
C CN H + P +C C H+T GP C C P + P+ +DD C
Sbjct: 707 CTCNQHGTCDPNTG--------ICVCSHHTEGPSCERCLPGFYGNPFAGQADDCQPC 755
Score = 32.0 bits (71), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEH---NTAGPDCNEC 277
C C+G + EC + R+ ST RC H +TAGP C C
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERC 367
>sp|Q90922|NET1_CHICK Netrin-1 OS=Gallus gallus GN=NTN1 PE=1 SV=1
Length = 606
Score = 246 bits (629), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/305 (44%), Positives = 186/305 (60%), Gaps = 22/305 (7%)
Query: 1 MDNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS-GTHVTANTCDYCY----ED 55
+ RCIP F N+AF V+ ++TCG P+R+CV + +C C +
Sbjct: 49 LPRRCIPDFVNSAFGKEVKVSSTCG-----KPPSRYCVVTEKGEEQVRSCHLCNASDPKR 103
Query: 56 THPVRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPES 113
HP +LTDL+N T WQS + VQ+P+ V +TL GK F+VTYV L F SPRPES
Sbjct: 104 AHPPSFLTDLNNPHNLTCWQSDSY---VQYPHNVTLTLSLGKKFEVTYVSLQFCSPRPES 160
Query: 114 FAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGA 173
AIYK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG
Sbjct: 161 MAIYKSMDYGKTWVPFQFYSTQCRKMYNKP-SRAAITKQNEQEAICTDSHTDVRPLSGGL 219
Query: 174 VPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIA 232
+ F+TL+GR A F + LQ++VTAT+I++T RL+TF DE D + R SYFYA++
Sbjct: 220 IAFSTLDGRPTAHDFDNSPVLQDWVTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVS 279
Query: 233 DISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SD 291
D+ VG RCKCNGHAS C VR D + VC C+HNTAGP+C+ C PF+ D PW+RA +
Sbjct: 280 DLQVGGRCKCNGHASRC--VRDRDDNL--VCDCKHNTAGPECDRCKPFHYDRPWQRATAR 335
Query: 292 DANEC 296
+ANEC
Sbjct: 336 EANEC 340
>sp|O95631|NET1_HUMAN Netrin-1 OS=Homo sapiens GN=NTN1 PE=1 SV=2
Length = 604
Score = 244 bits (622), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 138/302 (45%), Positives = 180/302 (59%), Gaps = 22/302 (7%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCY----EDTHP 58
RCIP F NAAF V ++TCG P R+CV S +C C + HP
Sbjct: 50 RCIPDFVNAAFGKDVRVSSTCGRP-----PARYCVVSERGEERLRSCHLCNASDPKKAHP 104
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+LTDL+N T WQS +Q+P+ V +TL GK F+VTYV L F SPRPES AI
Sbjct: 105 PAFLTDLNNPHNLTCWQSENY---LQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 161
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG + F
Sbjct: 162 YKSMDYGRTWVPFQFYSTQCRKMYNRP-HRAPITKQNEQEAVCTDSHTDMRPLSGGLIAF 220
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+IR+ RL+TF DE D + R SYFYA++D+
Sbjct: 221 STLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQ 280
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SDDAN 294
VG RCKCNGHA+ C VR D S VC C HNTAGP+C+ C PF+ D PW+RA + +AN
Sbjct: 281 VGGRCKCNGHAARC--VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQRATAREAN 336
Query: 295 EC 296
EC
Sbjct: 337 EC 338
>sp|Q2HXW4|NET1_PIG Netrin-1 OS=Sus scrofa GN=NTN1 PE=2 SV=1
Length = 600
Score = 244 bits (622), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 138/302 (45%), Positives = 180/302 (59%), Gaps = 22/302 (7%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCY----EDTHP 58
RCIP F NAAF V ++TCG P R+CV S +C C + HP
Sbjct: 50 RCIPDFVNAAFGKDVRVSSTCGRP-----PARYCVVSERGEERLRSCHLCNASDPKKAHP 104
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+LTDL+N T WQS +Q+P+ V +TL GK F+VTYV L F SPRPES AI
Sbjct: 105 PAFLTDLNNPHNLTCWQSENY---LQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 161
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG + F
Sbjct: 162 YKSMDYGRTWVPFQFYSTQCRKMYNRP-HRAPITKQNEQEAVCTDSHTDMRPLSGGLIAF 220
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+IR+ RL+TF DE D + R SYFYA++D+
Sbjct: 221 STLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQ 280
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SDDAN 294
VG RCKCNGHA+ C VR D S VC C HNTAGP+C+ C PF+ D PW+RA + +AN
Sbjct: 281 VGGRCKCNGHAARC--VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQRATAREAN 336
Query: 295 EC 296
EC
Sbjct: 337 EC 338
>sp|O09118|NET1_MOUSE Netrin-1 OS=Mus musculus GN=Ntn1 PE=1 SV=3
Length = 604
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/302 (45%), Positives = 180/302 (59%), Gaps = 22/302 (7%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCY----EDTHP 58
RCIP F NAAF V ++TCG P R+CV S +C C + HP
Sbjct: 50 RCIPDFVNAAFGKDVRVSSTCGRP-----PARYCVVSERGEERLRSCHLCNSSDPKKAHP 104
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+LTDL+N T WQS +Q+P+ V +TL GK F+VTYV L F SPRPES AI
Sbjct: 105 PAFLTDLNNPHNLTCWQSENY---LQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 161
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG + F
Sbjct: 162 YKSMDYGRTWVPFQFYSTQCRKMYNRP-HRAPITKQNEQEAVCTDSHTDMRPLSGGLIAF 220
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+IR+ RL+TF DE D + R SY+YA++D+
Sbjct: 221 STLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYYYAVSDLQ 280
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SDDAN 294
VG RCKCNGHA+ C VR D S VC C HNTAGP+C+ C PF+ D PW+RA + +AN
Sbjct: 281 VGGRCKCNGHAARC--VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQRATAREAN 336
Query: 295 EC 296
EC
Sbjct: 337 EC 338
>sp|Q924Z9|NET1_RAT Netrin-1 OS=Rattus norvegicus GN=Ntn1 PE=1 SV=1
Length = 604
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/302 (45%), Positives = 180/302 (59%), Gaps = 22/302 (7%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCY----EDTHP 58
RCIP F NAAF V ++TCG P R+CV S +C C + HP
Sbjct: 50 RCIPDFVNAAFGKDVRVSSTCGRP-----PARYCVVSERGEERLRSCHLCNSSDPKKAHP 104
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+LTDL+N T WQS +Q+P+ V +TL GK F+VTYV L F SPRPES AI
Sbjct: 105 PAFLTDLNNPHNLTCWQSENY---LQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 161
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG + F
Sbjct: 162 YKSMDYGRTWVPFQFYSTQCRKMYNRP-HRAPITKQNEQEAVCTDSHTDMRPLSGGLIAF 220
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+IR+ RL+TF DE D + R SY+YA++D+
Sbjct: 221 STLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYYYAVSDLQ 280
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SDDAN 294
VG RCKCNGHA+ C VR D S VC C HNTAGP+C+ C PF+ D PW+RA + +AN
Sbjct: 281 VGGRCKCNGHAARC--VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQRATAREAN 336
Query: 295 EC 296
EC
Sbjct: 337 EC 338
>sp|Q90923|NET3_CHICK Netrin-3 (Fragment) OS=Gallus gallus GN=NTN3 PE=2 SV=1
Length = 581
Score = 218 bits (554), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 169/302 (55%), Gaps = 33/302 (10%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLT 63
RCIP F NAAF V++++TCG PTR C S HP YLT
Sbjct: 38 RCIPEFVNAAFGKEVQASSTCGKP-----PTRHCDASDP-----------RRAHPPAYLT 81
Query: 64 DLSNTT--TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTY 121
DL+ T W+S T++ P+ V +TL GK F+V YV L F SPRPES AI+K
Sbjct: 82 DLNTAANMTCWRSETLH---HLPHNVTLTLSLGKKFEVVYVSLQFCSPRPESTAIFKSMD 138
Query: 122 ENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEG 181
+W P+Q+YS+ C++ YG P + ++ CT +DL PLTGG + F+TL+G
Sbjct: 139 YGKTWVPYQYYSSQCRKIYGKP-SKATVTKQNEQEALCTDGLTDLYPLTGGLIAFSTLDG 197
Query: 182 RYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP------SVLRSYFYAIADIS 235
R A+ F + LQ++VTAT+IR+ R + F + + + Y+Y++ ++
Sbjct: 198 RPSAQDFDSSPVLQDWVTATDIRVVFSRPHLFRELGGREAGEEDGGAGATPYYYSVGELQ 257
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDAN 294
VG RCKCNGHAS C D + VC C+HNT GP+C+ C PF+ D PW+RAS +AN
Sbjct: 258 VGGRCKCNGHASRC----VKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRASAREAN 313
Query: 295 EC 296
EC
Sbjct: 314 EC 315
>sp|P34710|UNC6_CAEEL Netrin unc-6 OS=Caenorhabditis elegans GN=unc-6 PE=1 SV=1
Length = 612
Score = 191 bits (485), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 172/316 (54%), Gaps = 40/316 (12%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFC-VQSG-THVTANTCDYC----YEDTH 57
RC+P F NAAF V +++TCG +P ++C V+ G + CD C + +H
Sbjct: 46 RCVPEFINAAFGKPVIASDTCGTN----RPDKYCTVKEGPDGIIREQCDTCDARNHFQSH 101
Query: 58 PVRYLTDLS---NTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESF 114
P LTDL+ N T W + ++ P V++TL GK F++TYV + F S P+S
Sbjct: 102 PASLLTDLNSIGNMTCWVSTPSLS-----PQNVSLTLSLGKKFELTYVSMHFCSRLPDSM 156
Query: 115 AIYKKTYENSSWTPFQFYSASCQETYGL-PDDNSGKANDSDTRVFCTSEYSDLSPLTGGA 173
A+YK +WTPFQFYS+ C+ +G PD + K+N+ + CT+ S + G
Sbjct: 157 ALYKSADFGKTWTPFQFYSSECRRIFGRDPDVSITKSNEQE--AVCTA--SHIMGPGGNR 212
Query: 174 VPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF------------LDP 221
V F LE R A+ F + LQ++VTAT+I++ RL+ EL+ D
Sbjct: 213 VAFPFLENRPSAQNFENSPVLQDWVTATDIKVVFSRLSPDQAELYGLSNDVNSYGNETDD 272
Query: 222 SVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFY 281
V + YFY++ +++VG RCKCNGHAS C + D R C C+HNTAG +C C PF+
Sbjct: 273 EVKQRYFYSMGELAVGGRCKCNGHASRCIF----DKMGRYTCDCKHNTAGTECEMCKPFH 328
Query: 282 NDAPWRRA-SDDANEC 296
D PW RA ++ AN C
Sbjct: 329 YDRPWGRATANSANSC 344
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 240 CKCNGHASECPY----VRQSDGSTRRVC-RCEHNTAGPDCNECAPFY 281
C CN HA C + R S + VC C HNTAG +C+ C P +
Sbjct: 347 CNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGF 393
>sp|Q61789|LAMA3_MOUSE Laminin subunit alpha-3 OS=Mus musculus GN=Lama3 PE=1 SV=3
Length = 3333
Score = 181 bits (460), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 169/322 (52%), Gaps = 36/322 (11%)
Query: 1 MDNRCI-PPFENAAFSASVESTNTCGYQN---GVPQPTRFCV--------QSGTHVTANT 48
M +R + PP+ N A +A + +T TCG ++ P+P FC SG +
Sbjct: 39 MSSRSLHPPYFNLAQAARIWATATCGERDPEVSRPRPELFCKLVGGPAAQGSGHTIQGQF 98
Query: 49 CDYC-YEDT---HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRL 104
CDYC ED+ HP + D + WWQS + G Q+ NQVN+TL G+ F V Y+ +
Sbjct: 99 CDYCNSEDSRKAHPASHAID--GSERWWQSPPLSSGTQY-NQVNLTLDLGQLFHVAYILI 155
Query: 105 LFW-SPRPESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCT 160
F SPRP+ + + + S+++P+Q+++ S C E +G + A D ++ C
Sbjct: 156 KFANSPRPDLWILERSVDFGSTYSPWQYFAHSRRDCVEQFG---QEANMAITQDDQMLCV 212
Query: 161 SEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF-- 218
+EYS + PL G + + + GR AK F+++ L+EF AT IR+ R NT L
Sbjct: 213 TEYSRIVPLENGEIVVSLINGRPGAKKFAFSDTLREFTKATNIRLRFLRTNTLLGHLISK 272
Query: 219 --LDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCN 275
DP+V R Y+Y+I DISVG RC CNGHA C +D ++ C C+H+T G CN
Sbjct: 273 AERDPTVTRRYYYSIKDISVGGRCVCNGHAEAC----SADNPEKQFRCECQHHTCGDTCN 328
Query: 276 ECAPFYNDAPWRRASDDA-NEC 296
C YN W+ A + NEC
Sbjct: 329 RCCAGYNQRRWQPAGQEQHNEC 350
Score = 35.0 bits (79), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 226 SYFYAIADISVG--ARCKCNGHASECPYVRQSDGSTRRVC-RCEHNTAGPDCNEC-APFY 281
Y++ + VG C CNGH++ C DGS +C C+HNTAG C C A Y
Sbjct: 1671 GYYWDNKSLPVGRCVPCNCNGHSNRC-----QDGSG--ICINCQHNTAGEHCERCQAGHY 1723
Query: 282 NDA 284
+A
Sbjct: 1724 GNA 1726
Score = 34.7 bits (78), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 12/54 (22%)
Query: 240 CKCNGHASEC---PYVRQSDGSTRR--------VC-RCEHNTAGPDCNECAPFY 281
C C+GHA +C P V S VC C+HNTAG +C +CA Y
Sbjct: 353 CNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGY 406
>sp|Q24567|NETA_DROME Netrin-A OS=Drosophila melanogaster GN=NetA PE=2 SV=2
Length = 726
Score = 177 bits (449), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 165/335 (49%), Gaps = 59/335 (17%)
Query: 5 CIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYE-DTHPVRYLT 63
CIP F NAA+ A V +++TCG R+C + +TCD + P R LT
Sbjct: 50 CIPDFVNAAYDAPVVASSTCGSSGA----QRYCEYQDHERSCHTCDMTDPLRSFPARSLT 105
Query: 64 DL--SNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLF--WSPRPESFAIYKK 119
DL SN T W+S + + V +TL GK F++TYV L +PRP+S IYK
Sbjct: 106 DLNNSNNVTCWRSEPVTGSG---DNVTLTLSLGKKFELTYVILQLCPHAPRPDSMVIYKS 162
Query: 120 TYENSSWTPFQFYSASCQETYGLPDDNS-GKANDSDTRVFCTSEYSDLSPLTGGAVPFAT 178
T SW PFQF+S+ C+ +G P S G+ N+ + R SD++ + F+T
Sbjct: 163 TDHGLSWQPFQFFSSQCRRLFGRPARQSTGRHNEHEARC------SDVTRPLVSRIAFST 216
Query: 179 LEGRYRAKTFSYNLNLQEFVTATEIRITLDRL---------------------------- 210
LEGR ++ + LQ++VTAT+IR+ RL
Sbjct: 217 LEGRPSSRDLDSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATDLASGKYSVPL 276
Query: 211 ------NTFYDELFLDPSVLRS-YFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVC 263
N L D + S YAI+D SVG RCKCNGHAS+C +D S + C
Sbjct: 277 ANGPAGNNIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKC----STDASGQLNC 332
Query: 264 RCEHNTAGPDCNECAPFYNDAPWRRA-SDDANECR 297
C HNTAG DC C PF+ D PW RA + +ANEC+
Sbjct: 333 ECSHNTAGRDCERCKPFHFDRPWARATAKEANECK 367
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 240 CKCNGHASECPY----VRQSDGSTRRVCR-CEHNTAGPDCNECAP-FYNDA 284
C CN HA +C + R S G + VC+ C H+T G +C++C FY DA
Sbjct: 369 CNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDA 419
>sp|Q61001|LAMA5_MOUSE Laminin subunit alpha-5 OS=Mus musculus GN=Lama5 PE=1 SV=4
Length = 3718
Score = 177 bits (449), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 162/318 (50%), Gaps = 34/318 (10%)
Query: 7 PPFENAAFSASVESTNTCGYQ---NGVPQPTR--FCVQSGTHVTANT---------CDYC 52
PP+ N A A + ++ TCG + V +PT +C G V CD C
Sbjct: 52 PPYFNLAEGARITASATCGEEAPTRSVSRPTEDLYCKLVGGPVAGGDPNQTIQGQYCDIC 111
Query: 53 ----YEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW- 107
HPV D T WWQS + G+++ N+VN+TL G+ F V YV + F
Sbjct: 112 TAANSNKAHPVSNAID--GTERWWQSPPLSRGLEY-NEVNVTLDLGQVFHVAYVLIKFAN 168
Query: 108 SPRPESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYS 164
SPRP+ + + + T ++ P+QF+++S C E +G P D D V CT+EYS
Sbjct: 169 SPRPDLWVLERSTDFGHTYQPWQFFASSKRDCLERFG-PRTLERITQDDD--VICTTEYS 225
Query: 165 DLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDEL----FLD 220
+ PL G + + + GR A FSY+ L++F AT IR+ R NT L D
Sbjct: 226 RIVPLENGEIVVSLVNGRPGALNFSYSPLLRDFTKATNIRLRFLRTNTLLGHLMGKALRD 285
Query: 221 PSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPF 280
P+V R Y+Y+I DIS+G RC C+GHA C D R C C+HNT G C+ C P
Sbjct: 286 PTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPLD-PFRLQCACQHNTCGGSCDRCCPG 344
Query: 281 YNDAPWRRA-SDDANECR 297
+N PW+ A +D ANEC+
Sbjct: 345 FNQQPWKPATTDSANECQ 362
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 240 CKCNGHASEC---PYVRQSDGSTRR--------VCR-CEHNTAGPDCNECAPFYNDAPWR 287
C C+GHA +C P V + + S + VC C+H+T G +C C P + AP
Sbjct: 364 CNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAP-D 422
Query: 288 RASDDANECR 297
+ D + CR
Sbjct: 423 QPLDSPHVCR 432
>sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8
Length = 3695
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 161/318 (50%), Gaps = 34/318 (10%)
Query: 7 PPFENAAFSASVESTNTCGYQ---NGVPQPTR--FCVQSGTHVTANT---------CDYC 52
PP+ N A A + ++ TCG + G P+PT +C G V CD C
Sbjct: 47 PPYFNLAEGARIAASATCGEEAPARGSPRPTEDLYCKLVGGPVAGGDPNQTIRGQYCDIC 106
Query: 53 ----YEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW- 107
HP D T WWQS + G+++ N+VN+TL G+ F V YV + F
Sbjct: 107 TAANSNKAHPASNAID--GTERWWQSPPLSRGLEY-NEVNVTLDLGQVFHVAYVLIKFAN 163
Query: 108 SPRPESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYS 164
SPRP+ + + + ++ P+QF+++S C E +G + + D CT+EYS
Sbjct: 164 SPRPDLWVLERSMDFGRTYQPWQFFASSKRDCLERFG---PQTLERITRDDAAICTTEYS 220
Query: 165 DLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDEL----FLD 220
+ PL G + + + GR A FSY+ L+EF AT +R+ R NT L D
Sbjct: 221 RIVPLENGEIVVSLVNGRPGAMNFSYSPLLREFTKATNVRLRFLRTNTLLGHLMGKALRD 280
Query: 221 PSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPF 280
P+V R Y+Y+I DIS+G RC C+GHA C +D R C C+HNT G C+ C P
Sbjct: 281 PTVTRRYYYSIKDISIGGRCVCHGHADACDAKDPTD-PFRLQCTCQHNTCGGTCDRCCPG 339
Query: 281 YNDAPWRRA-SDDANECR 297
+N PW+ A ++ ANEC+
Sbjct: 340 FNQQPWKPATANSANECQ 357
>sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2
Length = 3333
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 163/314 (51%), Gaps = 33/314 (10%)
Query: 7 PPFENAAFSASVESTNTCGYQN---GVPQPTRFCV--------QSGTHVTANTCDYCYED 55
P + N A +A + +T TCG + G PQP +C SG + CDYC +
Sbjct: 49 PTYFNLAEAARIWATATCGERGPGEGRPQPELYCKLVGGPTAPGSGHTIQGQFCDYCNSE 108
Query: 56 ----THPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPR 110
HPV D + WWQS + G Q+ N+VN+TL G+ F V Y+ + F SPR
Sbjct: 109 DPRKAHPVTNAID--GSERWWQSPPLSSGTQY-NRVNLTLDLGQLFHVAYILIKFANSPR 165
Query: 111 PESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLS 167
P+ + + + S+++P+Q+++ S C + +G + N D D V C +EYS +
Sbjct: 166 PDLWVLERSVDFGSTYSPWQYFAHSKVDCLKEFGR-EANMAVTRDDD--VLCVTEYSRIV 222
Query: 168 PLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF----LDPSV 223
PL G V + + GR AK F+++ L+EF AT IR+ R NT L DP+V
Sbjct: 223 PLENGEVVVSLINGRPGAKNFTFSHTLREFTKATNIRLRFLRTNTLLGHLISKAQRDPTV 282
Query: 224 LRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYND 283
R Y+Y+I DIS+G +C CNGHA C + + R C C+H+T G C+ C YN
Sbjct: 283 TRRYYYSIKDISIGGQCVCNGHAEVC-NINNPEKLFR--CECQHHTCGETCDRCCTGYNQ 339
Query: 284 APWRRAS-DDANEC 296
WR A+ + ++EC
Sbjct: 340 RRWRPAAWEQSHEC 353
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 8/43 (18%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVC-RCEHNTAGPDCNECAPFY 281
C CNGH+++C DGS +C C+HNTAG C C Y
Sbjct: 1687 CNCNGHSNQC-----QDGSG--ICVNCQHNTAGEHCERCQEGY 1722
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 12/54 (22%)
Query: 240 CKCNGHASEC---PYVRQSDGSTRR--------VC-RCEHNTAGPDCNECAPFY 281
C C+GHAS C P V + S VC C+HNTAG +C +CA Y
Sbjct: 356 CNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGY 409
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTH----------VTANTCDYCY--- 53
PP+ N A + +T TCG P+ +C G + + CDYC
Sbjct: 26 PPYFNLATGRKIYATATCGQDTDGPE--LYCKLVGANTEHDHIDYSVIQGQVCDYCDPTV 83
Query: 54 -EDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRP 111
E HP D T WWQS + G+++ N+VN+T+ F + F V Y+ + SPRP
Sbjct: 84 PERNHPPENAID--GTEAWWQSPPLSRGMKF-NEVNLTINFEQEFHVAYLFIRMGNSPRP 140
Query: 112 ESFAIYKKTYENSSWTPFQFYS---ASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSP 168
+ + K T +WTP+Q +S A C+ +G ++ K D V CT+EYS + P
Sbjct: 141 GLWTLEKSTDYGKTWTPWQHFSDTPADCETYFG---KDTYKPITRDDDVICTTEYSKIVP 197
Query: 169 LTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF----LDPSVL 224
L G +P L R + + + LQE+ AT +RI L R L DP+V
Sbjct: 198 LENGEIPVMLLNERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDPTVT 257
Query: 225 RSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDA 284
R YFY+I DIS+G RC CNGHA C CRC+H+T G CNEC P +
Sbjct: 258 RRYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRILACRCQHHTCGIQCNECCPGFEQK 317
Query: 285 PWRR 288
WR+
Sbjct: 318 KWRQ 321
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 16/56 (28%)
Query: 240 CKCNGHASECPYVRQS-------------DGSTRRVCR-CEHNTAGPDCNECAPFY 281
C C+GH++EC Y + DG VC+ C+HNT G +CN+C P Y
Sbjct: 333 CNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGG--VCQNCQHNTVGINCNKCKPKY 386
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFY 281
C+CNGH+ C D +T +C+H T G C C Y
Sbjct: 1809 CECNGHSETC------DCATGICSKCQHGTEGDHCERCVSGY 1844
>sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens GN=LAMA1 PE=1 SV=2
Length = 3075
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 152/305 (49%), Gaps = 38/305 (12%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS----GTHVTANTCDYCYEDT------ 56
P N A +A + + TCG + P FC G V C C ++
Sbjct: 24 PAILNLASNAHISTNATCGEKG----PEMFCKLVEHVPGRPVRNPQCRICDGNSANPRER 79
Query: 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFA 115
HP+ + D T WWQS ++ +G ++ + V ITL + F V YV + +PRP ++
Sbjct: 80 HPISHAID--GTNNWWQSPSIQNGREY-HWVTITLDLRQVFQVAYVIIKAANAPRPGNW- 135
Query: 116 IYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
I +++ + ++++P+Q+Y+ S C Y + +D V CTS YS L PL G
Sbjct: 136 ILERSLDGTTFSPWQYYAVSDSECLSRYNITPRRGPPTYRADDEVICTSYYSRLVPLEHG 195
Query: 173 AVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF---------LDPSV 223
+ + + GR A S L EF +A IR+ L R+ T +L LDP V
Sbjct: 196 EIHTSLINGRPSADDLSPKL--LEFTSARYIRLRLQRIRTLNADLMTLSHREPKELDPIV 253
Query: 224 LRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYN 282
R Y+Y+I DISVG C C GHAS CP+ D +T+++ C+CEHNT G CN C P Y+
Sbjct: 254 TRRYYYSIKDISVGGMCICYGHASSCPW----DETTKKLQCQCEHNTCGESCNRCCPGYH 309
Query: 283 DAPWR 287
PWR
Sbjct: 310 QQPWR 314
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 226 SYFYAIADISVGARCK---CNGHASECPYVRQSDGSTRRVC-RCEHNTAGPDCNECAPFY 281
S +Y + I G C+ C+GHA+EC + VC C HNT G C +C P +
Sbjct: 725 SGYYRVDGILFGGICQPCECHGHAAEC--------NVHGVCIACAHNTTGVHCEQCLPGF 776
Query: 282 NDAPWRRASDDANEC 296
P R D C
Sbjct: 777 YGEPSRGTPGDCQPC 791
>sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus GN=Lama1 PE=1 SV=1
Length = 3084
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 150/314 (47%), Gaps = 37/314 (11%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS----GTHVTANTCDYCYEDT------ 56
P N A +A + + TCG + P FC G V C C ++
Sbjct: 31 PAILNLATNAHISANATCGEKG----PEMFCKLVEHVPGRPVRHAQCRVCDGNSTNPRER 86
Query: 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFA 115
HP+ + D T WWQS ++ +G ++ + V +TL + F V Y+ + +PRP ++
Sbjct: 87 HPISHAID--GTNNWWQSPSIQNGREY-HWVTVTLDLRQVFQVAYIIIKAANAPRPGNW- 142
Query: 116 IYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
I +++ + + P+Q+Y+ S C Y + +D V CTS YS L PL G
Sbjct: 143 ILERSVDGVKFKPWQYYAVSDTECLTRYKITPRRGPPTYRADNEVICTSYYSKLVPLEHG 202
Query: 173 AVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF---------LDPSV 223
+ + + GR A S L EF +A IR+ L R+ T +L LDP V
Sbjct: 203 EIHTSLINGRPSADDPSPQL--LEFTSARYIRLRLQRIRTLNADLMTLSHRDLRDLDPIV 260
Query: 224 LRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYND 283
R Y+Y+I DISVG C C GHAS CP+ + + + C+CEHNT G C+ C P Y+
Sbjct: 261 TRRYYYSIKDISVGGMCICYGHASSCPW---DEEAKQLQCQCEHNTCGESCDRCCPGYHQ 317
Query: 284 APWRRAS-DDANEC 296
PWR + NEC
Sbjct: 318 QPWRPGTISSGNEC 331
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
Query: 228 FYAIADISVGARCK---CNGHASECPYVRQSDGSTRRVCR-CEHNTAGPDCNECAPFYND 283
+Y + I G C+ C+GHASEC +C C HNT G C +C P +
Sbjct: 734 YYRVDGILFGGICQPCECHGHASEC--------DIHGICSVCTHNTTGDHCEQCLPGFYG 785
Query: 284 APWRRASDDANEC 296
P R D C
Sbjct: 786 TPSRGTPGDCQPC 798
>sp|Q9R1A3|NET3_MOUSE Netrin-3 OS=Mus musculus GN=Ntn3 PE=2 SV=1
Length = 580
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 136/296 (45%), Gaps = 31/296 (10%)
Query: 5 CIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLTD 64
CIP NAA V +++TCG R C S + H LT
Sbjct: 40 CIPGLVNAALGREVLASSTCGRSA-----NRVCDSSDP-----------QRAHSADLLTS 83
Query: 65 LSNTTT--WWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYE 122
T + W+S + Q P V +T+ GK F++ +V L F S P S A+ K
Sbjct: 84 APGTASPLCWRSDLLQ---QAPFNVTLTVPLGKAFELVFVSLRFCSAPPTSVALLKSQDH 140
Query: 123 NSSWTPFQFYSASCQETYG-LPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEG 181
SW P F+S+SC YG LP G + + + + P GG + F+ +G
Sbjct: 141 GRSWVPLGFFSSSCTLDYGRLPAPADGPSGPGPEALCFPAPQAQ--PDGGGLLAFSVQDG 198
Query: 182 RYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCK 241
+ + LQ++VTAT+IRI L R D D V Y Y+ ++ VG RCK
Sbjct: 199 SPQGLDLDNSPVLQDWVTATDIRIVLTRPAIQGDTR--DGGVTVPYSYSATELQVGGRCK 256
Query: 242 CNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANEC 296
CNGHAS C D VC C+H T GPDC+ C PFY D PW+RA+ +A+ C
Sbjct: 257 CNGHASRCLL----DTHGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHAC 308
>sp|O00634|NET3_HUMAN Netrin-3 OS=Homo sapiens GN=NTN3 PE=2 SV=1
Length = 580
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 131/289 (45%), Gaps = 30/289 (10%)
Query: 5 CIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLTD 64
C+P NAA V +++TCG TR C S H LT
Sbjct: 40 CVPGLVNAALGREVLASSTCGRPA-----TRACDASDP-----------RRAHSPALLTS 83
Query: 65 LSNTTT--WWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYE 122
T + W+S ++ + P V +T+ GK F++ +V L F S P S A+ K
Sbjct: 84 PGGTASPLCWRSESL---PRAPLNVTLTVPLGKAFELVFVSLRFCSAPPASVALLKSQDH 140
Query: 123 NSSWTPFQFYSASCQETYG-LPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEG 181
SW P F+S+ C YG LP +G A + + + P G + F+ +
Sbjct: 141 GRSWAPLGFFSSHCDLDYGRLPAPANGPAGPGPEALCFPAPLAQ--PDGSGLLAFSMQDS 198
Query: 182 RYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCK 241
+ LQ++VTAT++R+ L R +T D ++ V Y YA D+ VG RCK
Sbjct: 199 SPPGLDLDSSPVLQDWVTATDVRVVLTRPSTAGDPRDMEAVV--PYSYAATDLQVGGRCK 256
Query: 242 CNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
CNGHAS C D +C C H T GPDC C PFY D PW+RA+
Sbjct: 257 CNGHASRC----LLDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRAT 301
>sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus musculus GN=Lama2 PE=1 SV=1
Length = 3106
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 145/307 (47%), Gaps = 36/307 (11%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQ----SGTHVTANTCDYCYEDT------ 56
P N A +A + + TCG + P +C G V C C +++
Sbjct: 37 PAVLNLASNALITTNATCGEKG----PEMYCKLVEHVPGQPVRNPQCRICNQNSSNPYQR 92
Query: 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFA 115
HP+ D NT WWQS ++ +GV++ + V ITL + F + YV + SPRP ++
Sbjct: 93 HPITNAIDGKNT--WWQSPSIKNGVEY-HYVTITLDLQQVFQIAYVIVKAANSPRPGNW- 148
Query: 116 IYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
I +++ ++ + P+Q+++ + C Y + + D V CTS YS + PL G
Sbjct: 149 ILERSLDDVEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIHPLENG 208
Query: 173 AVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL---------DPSV 223
+ + + GR A S L EF +A IR+ R+ T +L + DP V
Sbjct: 209 EIHISLINGRPSADDPSPEL--LEFTSARYIRLRFQRIRTLNADLMMFAHKDPREIDPIV 266
Query: 224 LRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYND 283
R Y+Y++ DISVG C C GHA CP + + C CEHNT G C+ C P ++
Sbjct: 267 TRRYYYSVKDISVGGMCICYGHARACPL---DPATNKSRCECEHNTCGESCDRCCPGFHQ 323
Query: 284 APWRRAS 290
PWR +
Sbjct: 324 KPWRAGT 330
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDANEC 296
C+C HA C D T C+ +T GP CNEC P + P R + +D C
Sbjct: 753 CQCFAHAEAC------DDITGECLNCKDHTGGPYCNECLPGFYGDPTRGSPEDCQPC 803
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFY 281
C+CNGH+S+C D T C+H+TAG C CA Y
Sbjct: 1416 CQCNGHSSQC------DPETSVCQNCQHHTAGDFCERCALGY 1451
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 146/307 (47%), Gaps = 36/307 (11%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQ----SGTHVTANTCDYCYEDT------ 56
P N A +A + + TCG + P +C G V C C +++
Sbjct: 41 PAVLNLASNALITTNATCGEKG----PEMYCKLVEHVPGQPVRNPQCRICNQNSSNPNQR 96
Query: 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFA 115
HP+ D NT WWQS ++ +G+++ + V ITL + F + YV + SPRP ++
Sbjct: 97 HPITNAIDGKNT--WWQSPSIKNGIEY-HYVTITLDLQQVFQIAYVIVKAANSPRPGNW- 152
Query: 116 IYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
I +++ ++ + P+Q+++ + C Y + + D V CTS YS + PL G
Sbjct: 153 ILERSLDDVEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIHPLENG 212
Query: 173 AVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL---------DPSV 223
+ + + GR A S L EF +A IR+ R+ T +L + DP V
Sbjct: 213 EIHISLINGRPSADDPSPEL--LEFTSARYIRLRFQRIRTLNADLMMFAHKDPREIDPIV 270
Query: 224 LRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYND 283
R Y+Y++ DISVG C C GHA CP + + C CEHNT G C++C P ++
Sbjct: 271 TRRYYYSVKDISVGGMCICYGHARACPL---DPATNKSRCECEHNTCGDSCDQCCPGFHQ 327
Query: 284 APWRRAS 290
PWR +
Sbjct: 328 KPWRAGT 334
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDANEC 296
C+C GHA C D T C+ +T GP C++C P + P + S+D C
Sbjct: 757 CQCFGHAESC------DDVTGECLNCKDHTGGPYCDKCLPGFYGEPTKGTSEDCQPC 807
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFY 281
C+CNGH+S C D T C+H+TAG C CA Y
Sbjct: 1420 CQCNGHSSLC------DPETSICQNCQHHTAGDFCERCALGY 1455
>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis elegans GN=epi-1 PE=1
SV=1
Length = 3672
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 126/255 (49%), Gaps = 16/255 (6%)
Query: 49 CDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRL-LFW 107
C+ E++HP + D +N+ WW S + G+Q N+VNIT+ + F V YV + +
Sbjct: 104 CNAGNENSHPAANMVDGNNS--WWMSPPLSRGLQH-NEVNITIDLEQEFHVAYVWIQMAN 160
Query: 108 SPRPESFAIYKKTYENSSWTP---FQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYS 164
SPRP S+ + + T ++ P F +A C +G+ + +DS V C ++ +
Sbjct: 161 SPRPGSWVLERSTDHGKTYQPWFNFAENAAECMRRFGMESLSPISEDDS---VTCRTDMA 217
Query: 165 DLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF-----L 219
L PL + LE R ++ F+ + LQ F AT +R+ L T L
Sbjct: 218 SLQPLENAEMVIRILEHRPSSRQFATSEALQNFTRATNVRLRLLGTRTLQGHLMDMNEWR 277
Query: 220 DPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAP 279
DP+V R YFYAI +I +G RC CNGHA C + + +CRCEHNT G C C P
Sbjct: 278 DPTVTRRYFYAIKEIMIGGRCVCNGHAVTCD-ILEPQRPKSLLCRCEHNTCGDMCERCCP 336
Query: 280 FYNDAPWRRASDDAN 294
+ W+ A+ N
Sbjct: 337 GFVQKQWQAATAHNN 351
>sp|Q8R4G0|NTNG1_MOUSE Netrin-G1 OS=Mus musculus GN=Ntng1 PE=1 SV=2
Length = 539
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 128/275 (46%), Gaps = 25/275 (9%)
Query: 33 PTRFCVQSGTHVTANTCDYCY-EDTHPVRYLTDLS--NTTTWWQSTTMYDGVQWPNQVNI 89
P FC ++ N CD E HP + D + +T+WQS T + + P QVNI
Sbjct: 76 PESFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPK-PLQVNI 134
Query: 90 TLKFGKTFDVT-YVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGL-PDDNS 147
TL + KT ++T + + F S RP+ + K +W P+Q+Y+ C + + P
Sbjct: 135 TLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVK 194
Query: 148 GKANDSDTRVFCTSEYSDLSPLTGGAVPF------ATLEG-RYRAKTFSYNL-----NLQ 195
+ + + CT EYS + F A G R R Y L+
Sbjct: 195 DLSQHTVLEIICTEEYSTGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLR 254
Query: 196 EFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQS 255
+F T T++RI L L E+F+D L YFYAI+DI V RCKCN HA+ C Y
Sbjct: 255 DFFTVTDLRIRL--LRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLY---- 308
Query: 256 DGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
+++ C CEHNT GPDC +C Y PW S
Sbjct: 309 -DNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGS 342
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 231 IADISVGARCKCNGHASECPYVRQSDGSTRRVC-RCEHNTAGPDCNECAPFYNDAPWRRA 289
I IS C+C GH++ C Y+ D +C C+HNT G C C Y +R A
Sbjct: 355 IPSISSIGNCECFGHSNRCSYI---DLLNTVICVSCKHNTRGQHCELCRLGY----FRNA 407
Query: 290 S---DDANEC 296
S DD N C
Sbjct: 408 SAQLDDENVC 417
>sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens GN=LAMB4 PE=2 SV=1
Length = 1761
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 118/237 (49%), Gaps = 20/237 (8%)
Query: 71 WWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQ 130
WWQS D V+I L F +++ L F + RP + + + T +W F+
Sbjct: 104 WWQSENGLD------HVSIRLDLEALFRFSHLILTFKTFRPAAMLVERSTDYGHNWKVFK 157
Query: 131 FYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSY 190
+++ C ++ P+ SG+A + C S+YSD+ P TGG V L+ + + Y
Sbjct: 158 YFAKDCATSF--PNITSGQAQGVGD-IVCDSKYSDIEPSTGGEVVLKVLDPSFEIEN-PY 213
Query: 191 NLNLQEFVTATEIRITLDRLNTFYDELF--LDPSVLRSYFYAIADISVGARCKCNGHASE 248
+ +Q+ VT T +RI +L+T D L L Y+YA+ ++ V C CNGHASE
Sbjct: 214 SPYIQDLVTLTNLRINFTKLHTLGDALLGRRQNDSLDKYYYALYEMIVRGSCFCNGHASE 273
Query: 249 CPYVRQSDGST-------RRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
C +++ G C C+HNT GP+C C F+ DAPWR A+D N CR
Sbjct: 274 CRPMQKMRGDVFSPPGMVHGQCVCQHNTDGPNCERCKDFFQDAPWRPAADLQDNACR 330
Score = 38.5 bits (88), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 240 CKCNGHASECPY----VRQSDGSTRRVCR-CEHNTAGPDCNECAPFYNDAPWRRASD 291
C CN H+S C + S G + VC C+HNT G C+ C P + P + SD
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISD 388
>sp|Q9Y2I2|NTNG1_HUMAN Netrin-G1 OS=Homo sapiens GN=NTNG1 PE=1 SV=3
Length = 539
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 129/275 (46%), Gaps = 25/275 (9%)
Query: 33 PTRFCVQSGTHVTANTCDYCY-EDTHPVRYLTDLS--NTTTWWQSTTMYDGVQWPNQVNI 89
P FC ++ N CD E HP + D + +T+WQS T + + P QVNI
Sbjct: 76 PETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPK-PLQVNI 134
Query: 90 TLKFGKTFDVT-YVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGL-PDDNS 147
TL + KT ++T + + F S RP+ + K +W P+Q+Y+ C + + + P
Sbjct: 135 TLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHMDPKSVK 194
Query: 148 GKANDSDTRVFCTSEYSDLSPLTGGAVPF------ATLEG-RYRAKTFSYNL-----NLQ 195
+ + + CT EYS + F A G R R Y L+
Sbjct: 195 DLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLR 254
Query: 196 EFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQS 255
+F T T++RI L L E+F+D L YFYAI+DI V RCKCN HA+ C Y
Sbjct: 255 DFFTVTDLRIRL--LRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATVCVY---- 308
Query: 256 DGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
+++ C CEHNT GPDC +C Y PW S
Sbjct: 309 -DNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGS 342
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 231 IADISVGARCKCNGHASECPYVRQSDGSTRRVC-RCEHNTAGPDCNECAPFYNDAPWRRA 289
I IS C+C GH++ C Y+ D +C C+HNT G C C Y +R A
Sbjct: 355 IPSISSIGNCECFGHSNRCSYI---DLLNTVICVSCKHNTRGQHCELCRLGY----FRNA 407
Query: 290 S---DDANEC 296
S DD N C
Sbjct: 408 SAQLDDENVC 417
>sp|Q24568|NETB_DROME Netrin-B OS=Drosophila melanogaster GN=NetB PE=1 SV=1
Length = 793
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 126/240 (52%), Gaps = 39/240 (16%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFC--VQSGTHVTANTCDYCYEDTHPVRY 61
+C+P F NAA+ V++++ CG Q QP R+C ++ G A C C + +
Sbjct: 42 KCLPSFVNAAYGNPVQASSVCGAQ----QPERYCELLRDGN---AGECRSCEQQRYGPAA 94
Query: 62 LTDLSN--TTTWWQSTTM---YD-GVQWPNQVNITLKFGKTFDVTYVRLLF--WSPRPES 113
LTDL+N T W+S + +D P+ V +TL GK +++TY+ L F SPRP+S
Sbjct: 95 LTDLNNPSNVTCWRSGAVNVPHDPDSAPPDNVTLTLSLGKKYELTYISLSFCPRSPRPDS 154
Query: 114 FAIYKKTYENSSWTPFQFYSASCQETYGLPDDNS-GKANDSDTRVFCTSEYSDLSPLTGG 172
AI+K + +W PFQFYS+ CQ+ YG PD K N+ + R C + D TGG
Sbjct: 155 LAIFKSSDFGQTWQPFQFYSSQCQKFYGRPDRAKISKFNEQEAR--CINSQHD----TGG 208
Query: 173 AV---PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRL------------NTFYDEL 217
A F TLEGR A +L LQ++VTAT+IR+ RL N F DE+
Sbjct: 209 AAQRFAFNTLEGRPSANDLDSSLVLQDWVTATDIRVVFHRLELPPQLLKVKNANAFSDEM 268
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 51/106 (48%), Gaps = 34/106 (32%)
Query: 226 SYFYAIADISVGARCKCNGHASEC----------PYVRQSDGSTR--------------- 260
S YA++D +VG RCKCNGHASEC Q DG
Sbjct: 391 SQHYAVSDFAVGGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANHFGRS 450
Query: 261 --------RVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
C C+HNTAGP+C C PFY D PW RA+D DANEC+
Sbjct: 451 TQMSAKLTMTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECK 496
>sp|Q5RB89|NET4_PONAB Netrin-4 OS=Pongo abelii GN=NTN4 PE=2 SV=1
Length = 628
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 137/319 (42%), Gaps = 42/319 (13%)
Query: 2 DNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRY 61
+ C P N A + + TCG QN + + CD C HP +
Sbjct: 31 EKACNPRMGNLALGRKLWADTTCG-QNATELYCFYSENTDLTCRQPKCDKC-NAAHP--H 86
Query: 62 LTDLSNTT---------TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPE 112
L L + TWWQS ++ I L F T++ ++F SPRP
Sbjct: 87 LAHLPSAMADSSFRFPRTWWQSAEDV------HREKIQLDLEAEFYFTHLIMMFKSPRPA 140
Query: 113 SFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
+ + + +W P+++++ +C T+GL DD K CTS+YS P TGG
Sbjct: 141 AMVLDRSQDFGKTWKPYKYFATNCSATFGLEDDVVKKG------AICTSKYSSPFPCTGG 194
Query: 173 AVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTF---YDELFLDPSVLRSYFY 229
V F L Y + Y+ +QE + T +R+ L + + ++L +P Y
Sbjct: 195 EVIFKALSPPYDTEN-PYSAKVQEQLKITNLRVQLLKRQSCPCQRNDLNDEPQHFT--HY 251
Query: 230 AIADISVGARCKCNGHASECPYVR-----QSDGSTRRV---CRCEHNTAGPDCNECAPFY 281
AI D V C CNGHA +C V ++ G+ V C C+HNTAG C CAP Y
Sbjct: 252 AIYDFIVKGSCFCNGHADQCIPVHGFRPVKAPGTFHMVHGKCMCKHNTAGSHCQHCAPLY 311
Query: 282 NDAPWRRASDDA---NECR 297
ND PW A NECR
Sbjct: 312 NDQPWEAADGKTGAPNECR 330
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 240 CKCNGHASECPY---VRQSDGS-TRRVCR-CEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
CKCNGHA C + V ++ G+ + VC C+HNT G C C P FY D RR
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDL--RRPFSAP 389
Query: 294 NECR 297
+ C+
Sbjct: 390 DACK 393
>sp|Q9JI33|NET4_MOUSE Netrin-4 OS=Mus musculus GN=Ntn4 PE=2 SV=2
Length = 628
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 135/314 (42%), Gaps = 32/314 (10%)
Query: 2 DNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYC----YEDTH 57
+ C P N A + + CG QN + + CD C H
Sbjct: 31 EKACNPRMGNLALGRKLRADTMCG-QNATELFCFYSENADLTCRQPKCDKCNAAHSHLAH 89
Query: 58 PVRYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFA 115
P + D S TWWQS ++ I L F T++ ++F SPRP +
Sbjct: 90 PPSAMADSSFRFPRTWWQSAEDV------HREKIQLDLEAEFYFTHLIMVFKSPRPAAMV 143
Query: 116 IYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVP 175
+ + +W P+++++ +C T+GL DD K CTS YS+ P TGG V
Sbjct: 144 LDRSQDFGKTWKPYKYFATNCSATFGLEDDVVKKG------AICTSRYSNPFPCTGGEVI 197
Query: 176 FATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF-LDPSVLRSYFYAIADI 234
F L Y + Y+ +QE + T +R+ L + + ++ L+ YA+ D
Sbjct: 198 FRALSPPYDIEN-PYSAKVQEQLKITNLRVRLLKRQSCPCQINDLNAKPHHFMHYAVYDF 256
Query: 235 SVGARCKCNGHASECPYVR-----QSDGSTRRV---CRCEHNTAGPDCNECAPFYNDAPW 286
V C CNGHA +C V ++ G+ V C C+HNTAG C CAP YND PW
Sbjct: 257 IVKGSCFCNGHADQCLPVEGFRPIKAPGAFHVVHGRCMCKHNTAGSHCQHCAPLYNDRPW 316
Query: 287 RRA---SDDANECR 297
A + NECR
Sbjct: 317 EAADGRTGAPNECR 330
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 240 CKCNGHASECPY---VRQSDGS-TRRVCR-CEHNTAGPDCNECAP-FYND 283
CKCNGHA C + V ++ G+ + VC C+HNT G C C P FY D
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRD 381
>sp|Q96CW9|NTNG2_HUMAN Netrin-G2 OS=Homo sapiens GN=NTNG2 PE=1 SV=2
Length = 530
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 126/278 (45%), Gaps = 30/278 (10%)
Query: 33 PTRFCVQSGTHVTANTCDYCYED-THPVRYLTDLS--NTTTWWQSTTMYDGVQWPNQVNI 89
P RFC ++ +N CD D HP R + D T+WQS T + P + NI
Sbjct: 65 PERFCSHENPYLCSNECDASNPDLAHPPRLMFDKEEEGLATYWQSIT-WSRYPSPLEANI 123
Query: 90 TLKFGKTFDVTY-VRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSG 148
TL + KT ++T V + F RP + K +W P+QFY+ C E +G+ +
Sbjct: 124 TLSWNKTVELTDDVVMTFEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFGMSARRAR 183
Query: 149 KANDSDT-RVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSY-------NL-------- 192
+ S RV CT EYS + E R R F+ NL
Sbjct: 184 DMSSSSAHRVLCTEEYSRWA--GSKKEKHVRFEVRDRFAIFAGPDLRNMDNLYTRLESAK 241
Query: 193 NLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYV 252
L+EF T T++R+ L L ++ L YFYAI++I V RCKCN HA+ C
Sbjct: 242 GLKEFFTLTDLRMRL--LRPALGGTYVQRENLYKYFYAISNIEVIGRCKCNLHANLC--- 296
Query: 253 RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
+GS + C CEHNT GPDC +C + WR S
Sbjct: 297 SMREGSLQ--CECEHNTTGPDCGKCKKNFRTRSWRAGS 332
>sp|Q9HB63|NET4_HUMAN Netrin-4 OS=Homo sapiens GN=NTN4 PE=2 SV=2
Length = 628
Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 138/316 (43%), Gaps = 36/316 (11%)
Query: 2 DNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYED-THPVR 60
+ C P N A + + TCG QN + + CD C H
Sbjct: 31 EKACNPRMGNLALGRKLWADTTCG-QNATELYCFYSENTDLTCRQPKCDKCNAAYPHLAH 89
Query: 61 YLTDLSNTT-----TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFA 115
+ +++++ TWWQS ++ I L F T++ ++F SPRP +
Sbjct: 90 LPSAMADSSFRFPRTWWQSAEDV------HREKIQLDLEAEFYFTHLIVMFKSPRPAAMV 143
Query: 116 IYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVP 175
+ + +W P+++++ +C T+GL DD K CTS+YS P TGG V
Sbjct: 144 LDRSQDFGKTWKPYKYFATNCSATFGLEDDVVKKG------AICTSKYSSPFPCTGGEVI 197
Query: 176 FATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTF---YDELFLDPSVLRSYFYAIA 232
F L Y + Y+ +QE + T +R+ L + + ++L +P YAI
Sbjct: 198 FKALSPPYDTEN-PYSAKVQEQLKITNLRVQLLKRQSCPCQRNDLNEEPQHFT--HYAIY 254
Query: 233 DISVGARCKCNGHASECPYVR-----QSDGSTRRV---CRCEHNTAGPDCNECAPFYNDA 284
D V C CNGHA +C V ++ G+ V C C+HNTAG C CAP YND
Sbjct: 255 DFIVKGSCFCNGHADQCIPVHGFRPVKAPGTFHMVHGKCMCKHNTAGSHCQHCAPLYNDR 314
Query: 285 PWRRASDDA---NECR 297
PW A NECR
Sbjct: 315 PWEAADGKTGAPNECR 330
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 240 CKCNGHASECPY---VRQSDGS-TRRVC-RCEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
CKCNGHA C + V ++ G+ + VC C+HNT G C C P FY D RR
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDL--RRPFSAP 389
Query: 294 NECR 297
+ C+
Sbjct: 390 DACK 393
>sp|Q01635|LAMB1_CHICK Laminin subunit beta-1 (Fragment) OS=Gallus gallus GN=LAMB1 PE=2
SV=1
Length = 303
Score = 120 bits (302), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 16/233 (6%)
Query: 71 WWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQ 130
WWQS +G++ V I L F T++ + F + RP + I + + +W ++
Sbjct: 43 WWQSE---NGLE---NVTIQLNLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWQVYR 96
Query: 131 FYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSY 190
+++ C+ ++ P ++G D + C S YSD+ P T G V + L+ +R + Y
Sbjct: 97 YFAYDCESSF--PGISTGPMKKVDD-IICDSRYSDIEPSTEGEVIYRVLDPAFRIED-PY 152
Query: 191 NLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADISVGARCKCNGHASEC 249
+ +Q + T +R+ +L+T D L +R Y+YAI D+ V C C GHASEC
Sbjct: 153 SPRIQNLLKITNLRVKFTKLHTLGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASEC 212
Query: 250 P----YVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
+ + +G C C HNT G +C +C FY+D PWR A ++N C+
Sbjct: 213 APVEGFSEEVEGMVHGHCMCRHNTKGLNCEQCLDFYHDLPWRPAEGRNSNACK 265
>sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2
Length = 1786
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 140/295 (47%), Gaps = 32/295 (10%)
Query: 21 TNTCGYQNGVPQPTRFCVQSGTH-----VTANTCDYCYEDTHPVRYLTDLSNTT------ 69
T+TCG P+P +C+ S N+ D +E +P +L + TT
Sbjct: 53 TSTCGLHK--PEP--YCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPNRL 108
Query: 70 -TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTP 128
WWQS +GV+ V I L F T++ + F + RP + I + + +W
Sbjct: 109 KIWWQSE---NGVE---NVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGV 162
Query: 129 FQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTF 188
+++++ C+ ++ P ++G D + C S YSD+ P T G V F L+ ++ +
Sbjct: 163 YRYFAYDCEASF--PGISTGPMKKVDD-IICDSRYSDIEPSTEGEVIFRALDPAFKIED- 218
Query: 189 SYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADISVGARCKCNGHAS 247
Y+ +Q + T +RI +L+T D L +R Y+YA+ D+ V C C GHAS
Sbjct: 219 PYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHAS 278
Query: 248 ECPYV----RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
EC V + +G C C HNT G +C C FY+D PWR A ++N C+
Sbjct: 279 ECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACK 333
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 239 RCKCNGHASECPY---VRQSDGS-TRRVCR-CEHNTAGPDCNECAPFYNDAPWRRASD 291
+C CN H+ C + V + G+ + VC C+HNT G +C +C PFY P R D
Sbjct: 334 KCNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRD 391
>sp|P02469|LAMB1_MOUSE Laminin subunit beta-1 OS=Mus musculus GN=Lamb1 PE=1 SV=3
Length = 1786
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 141/297 (47%), Gaps = 36/297 (12%)
Query: 21 TNTCGYQNGVPQPTRFCVQSGTHVTANT-CDYC------YEDTHPVRYLTDLSNTT---- 69
T+TCG +P +C+ S H+ + C C +E +P +L + TT
Sbjct: 53 TSTCGLH----KPEPYCIVS--HLQEDKKCFICDSRDPYHETLNPDSHLIENVVTTFAPN 106
Query: 70 ---TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSW 126
WWQS +GV+ V I L F T++ + F + RP + I + + +W
Sbjct: 107 RLKIWWQSE---NGVE---NVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKAW 160
Query: 127 TPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAK 186
+++++ C+ ++ P ++G D + C S YSD+ P T G V F L+ ++ +
Sbjct: 161 GVYRYFAYDCESSF--PGISTGPMKKVDD-IICDSRYSDIEPSTEGEVIFRALDPAFKIE 217
Query: 187 TFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADISVGARCKCNGH 245
Y+ +Q + T +RI +L+T D L +R Y+YA+ D+ V C C GH
Sbjct: 218 D-PYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGH 276
Query: 246 ASECPYV----RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
ASEC V + +G C C HNT G +C C FY+D PWR A ++N C+
Sbjct: 277 ASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACK 333
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 239 RCKCNGHASECPY---VRQSDGS-TRRVC-RCEHNTAGPDCNECAPFYNDAPWRRASD 291
+C CN H+S C + V + G+ + VC C+HNT G +C +C PFY P R D
Sbjct: 334 KCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRD 391
>sp|Q8R4F1|NTNG2_MOUSE Netrin-G2 OS=Mus musculus GN=Ntng2 PE=1 SV=2
Length = 589
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 132/281 (46%), Gaps = 36/281 (12%)
Query: 33 PTRFCVQSGTHVTANTCDYCYED-THPVRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNI 89
P RFC ++ +N CD D HP R + D + T+WQS T + P + NI
Sbjct: 65 PERFCSHENPYLCSNECDASNPDLAHPPRLMFDREDEGLATYWQSVT-WSRYPSPLEANI 123
Query: 90 TLKFGKTFDVTY-VRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSG 148
TL + K+ ++T V + F RP + K +W P+QFY+ C E +G+ ++
Sbjct: 124 TLSWNKSVELTDDVVVTFEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFGM---SAR 180
Query: 149 KAND----SDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFS----YNLN------- 193
+A D S RV CT EYS + E R R F+ N++
Sbjct: 181 RARDMSPSSAHRVLCTEEYSRWA--GSKKEKHVRFEVRDRFAIFAGPDLRNMDNLYTRME 238
Query: 194 ----LQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASEC 249
L+EF T T++R+ L L ++ L YFYAI++I V RCKCN HA+ C
Sbjct: 239 SAKGLKEFFTFTDLRMRL--LRPALGGTYVQRENLYKYFYAISNIEVIGRCKCNLHANLC 296
Query: 250 PYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
VR+ GS + C CEHNT GPDC C + WR S
Sbjct: 297 -TVRE--GSLQ--CECEHNTTGPDCGRCKKNFRTRAWRAGS 332
>sp|P11046|LAMB1_DROME Laminin subunit beta-1 OS=Drosophila melanogaster GN=LanB1 PE=1
SV=4
Length = 1788
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 29 GVPQPTRFCVQSGTHVTANTCDYC---YEDTH---------PVRYLTD-LSNTTTWWQST 75
G+ P RFC+ S H+ C C E H + Y T +N TWWQS
Sbjct: 76 GLHSPERFCILS--HLQDKKCFLCDTREETKHDPYKNHRIGQIIYKTKPGTNIPTWWQSE 133
Query: 76 TMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSAS 135
+ I L F T++ + F + RP + I + +W +++++
Sbjct: 134 NGKE------NATIQLDLEAEFHFTHLIITFTTFRPAAMYIERSFDFGQTWHIYRYFAYD 187
Query: 136 CQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNL 194
C+E++ G+P ++ T V CTS YS++ P G V F L T Y ++
Sbjct: 188 CKESFPGVP-----TVLENITDVMCTSRYSNVEPSRNGEVIFRVLPPNINV-TDPYAEHV 241
Query: 195 QEFVTATEIRITLDRLNTFYDELFLDPSVL--RSYFYAIADISVGARCKCNGHASEC--- 249
Q + T +RI + +L+ D L LD + Y+Y I+++ V C C GHAS+C
Sbjct: 242 QNQLKMTNLRIQMTKLHKLGDNL-LDSRLENEEKYYYGISNMVVRGSCSCYGHASQCLPL 300
Query: 250 -PYVRQSD---GSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA 289
P Q+D G C C HNT G +C EC F+ND PW+ A
Sbjct: 301 DPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPA 344
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 239 RCKCNGHASECPY---VRQSDG-STRRVC-RCEHNTAGPDCNECAPFY 281
+C+CN HA C + V + G + VC C HNT G C EC P++
Sbjct: 354 KCECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYF 401
>sp|Q13751|LAMB3_HUMAN Laminin subunit beta-3 OS=Homo sapiens GN=LAMB3 PE=1 SV=1
Length = 1172
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 131/307 (42%), Gaps = 32/307 (10%)
Query: 5 CIPPFENAAFSAS--VESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCYED---THP 58
C PP + + + +++TCG + +P +C Q G + CD +H
Sbjct: 26 CYPPVGDLLVGRTRFLRASSTCG----LTKPETYCTQYGEWQMKCCKCDSRQPHNYYSHR 81
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYK 118
V + S WWQS N V++ L + F + V + F P P I +
Sbjct: 82 VENVASSSGPMRWWQSQNDV------NPVSLQLDLDRRFQLQEVMMEFQGPMPAGMLIER 135
Query: 119 KTYENSSWTPFQFYSASCQETYGLPDDNSGKAND-SDTRVFCTSEYSDLSPLTGGAVPFA 177
+ +W +Q+ +A C T+ P G+ D R + + + L GG V
Sbjct: 136 SSDFGKTWRVYQYLAADCTSTF--PRVRQGRPQSWQDVRCQSLPQRPN-ARLNGGKVQLN 192
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
++ + + +QE T +R+ RL + PS +YA++ + +
Sbjct: 193 LMD-LVSGIPATQSQKIQEVGEITNLRVNFTRLAPVPQRGYHPPSA----YYAVSQLRLQ 247
Query: 238 ARCKCNGHASEC-PYVRQSDG-----STRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-S 290
C C+GHA C P S G VC C+HNTAGP+C CAPFYN+ PWR A
Sbjct: 248 GSCFCHGHADRCAPKPGASAGPSTAVQVHDVCVCQHNTAGPNCERCAPFYNNRPWRPAEG 307
Query: 291 DDANECR 297
DA+EC+
Sbjct: 308 QDAHECQ 314
>sp|P15800|LAMB2_RAT Laminin subunit beta-2 OS=Rattus norvegicus GN=Lamb2 PE=2 SV=1
Length = 1801
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 19/230 (8%)
Query: 69 TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTP 128
T WWQS +GV V I L F T++ + F + RP + + + +W
Sbjct: 124 TAWWQSE---NGVPM---VTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWRV 177
Query: 129 FQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKT 187
++++S C + G+P + +D V C S YS++ P T G V + L+
Sbjct: 178 YRYFSYDCGADFPGIPLAPPRRWDD----VVCESRYSEIEPSTEGEVIYRVLDPAIPIPD 233
Query: 188 FSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNGH 245
Y+ +Q + T +R+ L RL+T D L LDP + Y+YA+ ++ + C C GH
Sbjct: 234 -PYSSRIQNLLKITNLRVNLTRLHTLGDNL-LDPRREIREKYYYALYELVIRGNCFCYGH 291
Query: 246 ASECPYVRQS----DGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD 291
AS+C + +G C C+HNT G +C +C FY D PW A D
Sbjct: 292 ASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQDLPWHPAED 341
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 239 RCKCNGHASECPY---VRQSDGS-TRRVC-RCEHNTAGPDCNECAPFYNDAPWRRASDDA 293
+C+CNGH+ C + V + G+ + VC C+HNTAG C C PF+ P + D A
Sbjct: 349 KCECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPA 408
>sp|Q61292|LAMB2_MOUSE Laminin subunit beta-2 OS=Mus musculus GN=Lamb2 PE=2 SV=2
Length = 1799
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 19/230 (8%)
Query: 69 TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTP 128
T WWQS +GV V I L F T++ + F + RP + + + +W
Sbjct: 124 TAWWQSE---NGVPM---VTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWHV 177
Query: 129 FQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKT 187
++++S C + G+P + +D V C S YS++ P T G V + L+
Sbjct: 178 YRYFSYDCGADFPGIPLAPPRRWDD----VVCESRYSEIEPSTEGEVIYRVLDPAIPIPD 233
Query: 188 FSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNGH 245
Y+ +Q + T +R+ L RL+T D L LDP + Y+YA+ ++ + C C GH
Sbjct: 234 -PYSSRIQNLLKITNLRVNLTRLHTLGDNL-LDPRREIREKYYYALYELVIRGNCFCYGH 291
Query: 246 ASECPYVRQS----DGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD 291
AS+C + +G C C+HNT G +C +C FY D PW A D
Sbjct: 292 ASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQDLPWHPAED 341
Score = 35.4 bits (80), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 239 RCKCNGHASECPY---VRQSDGS-TRRVC-RCEHNTAGPDCNECAPFYNDAPWRRASDDA 293
+C+CNGH C + V + G+ + VC C+HNTAG C C PF+ P + D A
Sbjct: 349 KCECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPA 408
>sp|P55268|LAMB2_HUMAN Laminin subunit beta-2 OS=Homo sapiens GN=LAMB2 PE=1 SV=2
Length = 1798
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 112/237 (47%), Gaps = 20/237 (8%)
Query: 69 TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTP 128
WWQS +G+ V I L F T++ + F + RP + + + +W
Sbjct: 121 AAWWQSE---NGI---PAVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWHV 174
Query: 129 FQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKT 187
++++S C + G+P +D V C S YS++ P T G V + L+
Sbjct: 175 YRYFSYDCGADFPGVPLAPPRHWDD----VVCESRYSEIEPSTEGEVIYRVLDPAIPIPD 230
Query: 188 FSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNGH 245
Y+ +Q + T +R+ L RL+T D L LDP + Y+YA+ ++ V C C GH
Sbjct: 231 -PYSSRIQNLLKITNLRVNLTRLHTLGDNL-LDPRREIREKYYYALYELVVRGNCFCYGH 288
Query: 246 ASECPYVRQS----DGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDD-ANECR 297
ASEC + +G C C+HNT G +C +C FY D PWR A D ++ CR
Sbjct: 289 ASECAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYRDLPWRPAEDGHSHACR 345
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 239 RCKCNGHASECPY---VRQSDGS-TRRVC-RCEHNTAGPDCNECAPFYNDAPWRRASDDA 293
+C+C+GH C + V + G+ + VC C+HNTAG C C PF+ P + D A
Sbjct: 346 KCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPA 405
>sp|Q61087|LAMB3_MOUSE Laminin subunit beta-3 OS=Mus musculus GN=Lamb3 PE=2 SV=2
Length = 1168
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 29/304 (9%)
Query: 5 CIPPFENAAFSAS--VESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCYE---DTHP 58
C PP + + + +++TCG + +P +C Q G + CD ++H
Sbjct: 26 CYPPVGDLLIGRTQLLRASSTCG----LTKPETYCTQYGQWQMKCCKCDSRLPRNYNSHR 81
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYK 118
V + S WWQS + V++ L K + + + F P I +
Sbjct: 82 VENVASSSGPMRWWQSQNDV------SPVSLQLDLDKRMQLQDIMMDFKGLTPAGMLIER 135
Query: 119 KTYENSSWTPFQFYSASCQETYGLPDDNSGKAND-SDTRVFCTSEYSDLSPLTGGAVPFA 177
+ +W +Q+ + C T+ P + G+ + D R S+ + LTGG V
Sbjct: 136 SSDFGKTWRVYQYLATDCASTF--PQVHQGQPKNWQDVRCRPLSQRPN-GHLTGGKVQLN 192
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
++ A S + +QE T +R+ +L PS ++A++ + +
Sbjct: 193 LMD-LASAIPASQSKKIQELGDITNLRVNFTKLAPVPQRGSYPPSA----YFAVSQLRLQ 247
Query: 238 ARCKCNGHASEC---PYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SDDA 293
C C+GHA C P + VC C+HNTAGP+C+ CAPFYN+ PWR A D
Sbjct: 248 GSCFCHGHADRCAPNPGGSTTAVQVNNVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQDT 307
Query: 294 NECR 297
+EC+
Sbjct: 308 HECQ 311
>sp|Q8JHV6|LAMB4_DANRE Laminin subunit beta-4 OS=Danio rerio GN=lamb4 PE=2 SV=1
Length = 1827
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 114/237 (48%), Gaps = 20/237 (8%)
Query: 71 WWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQ 130
WWQS +GV ++V+I L F +++ L F S RP S + + +W F+
Sbjct: 106 WWQSE---NGV---HEVSIQLDLEAMFQFSHLILTFKSFRPASMLVERSKDFGRTWKVFR 159
Query: 131 FYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSY 190
+++ C ++ P + G A+ D V C S YS P T G V L+ + Y
Sbjct: 160 YFAEDCANSF--PGISEGPAHSIDDLV-CDSRYSGAEPSTEGEVVLKALDPSFDIHD-PY 215
Query: 191 NLNLQEFVTATEIRITLDRLNTFYDELFL--DPSVLRSYFYAIADISVGARCKCNGHASE 248
+ +Q +T T +R+ RL T D L + Y+YA+ ++ V C CNGHAS+
Sbjct: 216 DSTIQGLITLTNLRVNFTRLLTLGDTLLTRRKRNPQDKYYYALYEMVVRGSCFCNGHASQ 275
Query: 249 CPYVRQSDGST-------RRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
C V + G T C C+HNTAG +C C FY+DAPWR D++ C+
Sbjct: 276 CIPVDGARGDTFTEPGMVHGRCVCQHNTAGYNCERCQDFYHDAPWRPGGKADSDVCK 332
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 232 ADISVGARCKCNGHASECPY----VRQSDGSTRRVCR-CEHNTAGPDCNECAPFYNDAPW 286
AD V RC C+ H+ +C + + G + VC C +N GP C C PFY P
Sbjct: 326 ADSDVCKRCNCHSHSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQDPQ 385
Query: 287 RRASD 291
R D
Sbjct: 386 RSVDD 390
>sp|O75445|USH2A_HUMAN Usherin OS=Homo sapiens GN=USH2A PE=1 SV=3
Length = 5202
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 127/267 (47%), Gaps = 23/267 (8%)
Query: 31 PQPTRFCVQSGTHVTA-NTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNI 89
P R+C+ + TA N + HP+ ++ D ++ T W S + Q V I
Sbjct: 313 PLAQRYCIPNDAGDTADNRVSRLNPEAHPLSFVND-NDVGTSWVSNVFTNITQLNQGVTI 371
Query: 90 TLKF-GKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSG 148
++ + V Y+ + F+SP+P I +K + W +Q+++ +C +G+ ++
Sbjct: 372 SVDLENGQYQVFYIIIQFFSPQPTEIRIQRKKENSLDWEDWQYFARNCG-AFGMKNNGDL 430
Query: 149 KANDSDTRVFCTSEYSDLSPLTGGAVPFATLEG--RYRA--KTFSYNLNLQEFVTATEIR 204
+ DS V C + S+ +P + G V F+ L YR F +LQEFV AT+IR
Sbjct: 431 EKPDS---VNCL-QLSNFTPYSRGNVTFSILTPGPNYRPGYNNFYNTPSLQEFVKATQIR 486
Query: 205 ITLDRLNTFYDELFLDPSV--LRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV 262
F+ + + + LR +YA+ +I++ RC+C+GHA C Q R +
Sbjct: 487 FH------FHGQYYTTETAVNLRHRYYAVDEITISGRCQCHGHADNCDTTSQ---PYRCL 537
Query: 263 CRCEHNTAGPDCNECAPFYNDAPWRRA 289
C E T G C+ C P YND P+R+
Sbjct: 538 CSQESFTEGLHCDRCLPLYNDKPFRQG 564
>sp|Q8K3K1|USH2A_RAT Usherin OS=Rattus norvegicus GN=Ush2a PE=1 SV=1
Length = 1512
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 125/263 (47%), Gaps = 19/263 (7%)
Query: 31 PQPTRFCVQSGTHVT-ANTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNI 89
P ++C+ +G T + + HP+ ++ D + T W S D Q V I
Sbjct: 309 PSVQQYCIPNGVEDTLQHRVSRLNPEAHPLSFIND-DDVATSWISHVFTDITQLNQGVAI 367
Query: 90 TLKF-GKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSG 148
++ + V + + F SP+P + I +K + S W +Q+++ +C +G+ N+G
Sbjct: 368 SIDLENGQYQVFQITIRFSSPQPVAMRIQRKKADKSLWEDWQYFARNC-SVWGM--KNNG 424
Query: 149 KANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLN----LQEFVTATEIR 204
+ ++ V C ++ + P + G V F L + + Y+ LQEF+TAT+IR
Sbjct: 425 DLENPNS-VNCL-QFPEFIPFSHGNVTFDLLTSGQKHRPGDYDFYNSSLLQEFMTATQIR 482
Query: 205 ITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCR 264
+ L FY S R +YA+ +I++ RC+C+GHA C R+ R +C
Sbjct: 483 LYFRGL--FYPAWHTVDS--RHRYYAVDEITIIGRCQCHGHAETCDRTRRP---YRCLCS 535
Query: 265 CEHNTAGPDCNECAPFYNDAPWR 287
T GP C C+P YND P+R
Sbjct: 536 PHSFTEGPQCGRCSPLYNDKPFR 558
>sp|Q2QI47|USH2A_MOUSE Usherin OS=Mus musculus GN=Ush2A PE=1 SV=2
Length = 5193
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 31 PQPTRFCVQSGTHVTA-NTCDYCYEDTHPVRYLTDLSNTTTWWQS-----TTMYDGVQWP 84
P ++C+ +G T + + HP+ ++ D T+W T +Y+GV
Sbjct: 310 PSVQQYCIPNGAGDTPEHRMSRLNPEAHPLSFINDDDVATSWISHVFTNITQLYEGVA-- 367
Query: 85 NQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPD 144
++I L+ G+ + V V F S +P + I +K ++S W +Q+++ +C +G+ D
Sbjct: 368 --ISIDLENGQ-YQVLKVITQFSSLQPVAIRIQRKKADSSPWEDWQYFARNC-SVWGMKD 423
Query: 145 DNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKT----FSYNLNLQEFVTA 200
+ + +S V C + D P + G V F L + + F + LQEF+ A
Sbjct: 424 NEDLENPNS---VNCL-QLPDFIPFSHGNVTFDLLTSGQKHRPGYNDFYNSSVLQEFMRA 479
Query: 201 TEIRITLDRLNTFYDELFLDPSVL--RSYFYAIADISVGARCKCNGHASECPYVRQSDGS 258
T+IR+ F+ + + + R +YA+ +I V RC+C+GHA C R+
Sbjct: 480 TQIRLH------FHGQYYPAGHTVDWRHQYYAVDEIIVSGRCQCHGHAETCDRTRR---P 530
Query: 259 TRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDAN 294
R +C T GP C+ C+P YND P+ R+ D+ N
Sbjct: 531 YRCLCSPHSFTEGPQCDRCSPLYNDKPF-RSGDNVN 565
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 240 CKCNGHASEC-------PYVRQSDGSTRRVC-RCEHNTAGPDCNECAPFY 281
C+C+GHAS C P+ + + VC C+H+T G C C ++
Sbjct: 572 CQCHGHASSCHYDASVDPFPLEHNRGGGGVCDDCQHHTTGRHCESCQDYF 621
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,534,454
Number of Sequences: 539616
Number of extensions: 4727929
Number of successful extensions: 9100
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 8378
Number of HSP's gapped (non-prelim): 509
length of query: 297
length of database: 191,569,459
effective HSP length: 117
effective length of query: 180
effective length of database: 128,434,387
effective search space: 23118189660
effective search space used: 23118189660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)