Query psy15469
Match_columns 297
No_of_seqs 189 out of 929
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 21:51:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15469.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15469hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aqt_A Laminin subunit gamma-1 100.0 2.2E-91 7.6E-96 671.4 22.8 288 1-297 15-309 (375)
2 2y38_A Laminin subunit alpha-5 100.0 1.4E-87 4.9E-92 648.4 22.2 288 2-297 8-323 (403)
3 3tbd_A Netrin-G2, laminet-2; l 100.0 1.5E-85 5.3E-90 619.2 18.4 276 3-296 20-327 (338)
4 3zyj_B Netrin-G1; cell adhesio 100.0 3.8E-84 1.3E-88 626.8 20.4 277 2-297 47-355 (426)
5 4aqs_A Laminin subunit beta-1; 100.0 5.2E-80 1.8E-84 615.7 22.9 280 2-296 15-315 (525)
6 4a3z_A GH89_CBM32, alpha-N-ace 98.5 2.7E-07 9.3E-12 78.2 8.9 85 7-129 24-109 (161)
7 2y38_A Laminin subunit alpha-5 98.5 1.8E-08 6.3E-13 97.1 1.3 62 235-297 320-393 (403)
8 3lei_A Platelet aggregation fa 97.9 5.2E-05 1.8E-09 63.0 8.8 87 8-128 8-101 (153)
9 4gwi_A Lectinolysin, platelet 97.7 6E-05 2.1E-09 63.1 7.1 88 8-128 8-101 (153)
10 3eyp_A Putative alpha-L-fucosi 97.6 0.0001 3.5E-09 72.4 8.4 83 10-129 325-410 (469)
11 4a42_A GH89_CBM32-4, alpha-N-a 97.6 0.00011 3.8E-09 60.9 7.1 63 58-129 42-104 (149)
12 4a4a_A Alpha-N-acetylglucosami 97.6 0.00015 5.3E-09 76.1 8.6 84 7-130 22-105 (914)
13 4aqt_A Laminin subunit gamma-1 97.5 1.4E-05 4.8E-10 76.4 -0.3 51 235-285 306-359 (375)
14 3f2z_A Uncharacterized protein 97.5 0.00047 1.6E-08 57.0 9.2 70 57-130 28-101 (159)
15 2yc2_A IFT25, intraflagellar t 97.4 0.00029 9.9E-09 57.9 7.2 64 56-129 26-90 (139)
16 2jda_A Yecbm32; hypothetical p 97.4 0.00032 1.1E-08 56.5 7.3 63 57-130 24-88 (145)
17 4a41_A GH89_CBM32-5, alpha-N-a 97.4 0.00028 9.7E-09 59.0 7.1 68 57-129 45-116 (161)
18 1klo_A Laminin; glycoprotein; 97.4 3.2E-05 1.1E-09 65.3 0.6 45 240-288 1-46 (162)
19 3hnm_A Putative chitobiase; PS 97.3 0.00046 1.6E-08 58.9 6.9 69 57-130 39-115 (172)
20 3ggl_A Putative chitobiase; X- 97.2 0.0012 4.1E-08 55.3 8.8 70 57-130 38-111 (169)
21 1tvg_A LOC51668 protein; cell 97.2 0.0007 2.4E-08 56.7 7.1 63 56-129 34-98 (153)
22 2j1a_A Hyaluronidase, CBM32; p 97.2 0.00056 1.9E-08 55.0 6.2 68 57-128 26-97 (150)
23 1k12_A Lectin; beta barrel, pr 97.0 0.0022 7.4E-08 53.5 8.3 86 7-119 6-95 (158)
24 2j1v_A Fucolectin-related prot 96.9 0.0023 7.8E-08 53.1 7.7 87 3-121 9-99 (151)
25 1klo_A Laminin; glycoprotein; 96.7 0.00044 1.5E-08 58.2 1.8 46 235-287 51-102 (162)
26 3cqo_A FBP32; F-lectin, fucole 96.7 0.0027 9.4E-08 57.8 6.7 61 57-119 169-232 (293)
27 2j22_A Fucolectin-related prot 96.3 0.0075 2.6E-07 49.8 6.7 67 9-107 12-78 (148)
28 3cqo_A FBP32; F-lectin, fucole 96.3 0.0051 1.7E-07 56.0 6.0 69 8-107 2-71 (293)
29 1w8o_A Bacterial sialidase; 3D 95.6 0.03 1E-06 55.4 8.4 71 56-129 477-552 (601)
30 2v72_A CBM32, EXO-alpha-sialid 95.2 0.037 1.3E-06 43.8 6.4 64 57-125 27-94 (143)
31 3ues_A Alpha-1,3/4-fucosidase; 94.8 0.038 1.3E-06 54.2 6.2 66 57-130 368-436 (478)
32 2v5d_A O-GLCNACASE NAGJ; famil 94.5 0.045 1.5E-06 56.4 6.3 70 57-130 613-686 (737)
33 1k3i_A Galactose oxidase precu 94.4 0.063 2.2E-06 53.6 7.0 70 57-129 42-117 (656)
34 3bn6_A Lactadherin; anticoagul 94.4 0.046 1.6E-06 45.2 4.9 67 57-130 33-105 (158)
35 2w1s_A Hyaluronoglucosaminidas 93.2 0.25 8.6E-06 42.3 7.6 65 60-131 41-115 (192)
36 1jhj_A APC10; beta sandwich, j 93.1 0.11 3.9E-06 44.1 5.2 64 57-129 39-107 (171)
37 1czt_A Protein (coagulation fa 92.6 0.13 4.4E-06 42.6 4.8 67 57-130 32-104 (160)
38 4aqs_A Laminin subunit beta-1; 91.5 0.039 1.3E-06 54.3 0.3 53 237-289 315-372 (525)
39 2qqi_A Neuropilin-1; VEGF rece 91.1 0.57 1.9E-05 42.9 7.8 69 57-130 189-262 (318)
40 1gqp_A DOC1/APC10; cell cycle, 90.0 0.43 1.5E-05 42.1 5.6 54 57-118 70-128 (221)
41 2zxq_A Endo-alpha-N-acetylgala 89.2 0.071 2.4E-06 57.8 0.0 70 57-129 1244-1320(1376)
42 2cho_A Glucosaminidase, hexosa 88.7 0.15 5.1E-06 52.4 1.9 67 58-129 604-671 (716)
43 2wuh_A Discoidin domain recept 88.5 0.64 2.2E-05 39.2 5.5 58 69-130 57-121 (178)
44 2qqi_A Neuropilin-1; VEGF rece 88.5 0.5 1.7E-05 43.3 5.2 66 57-130 33-105 (318)
45 4deq_A Neuropilin-1, vascular 87.9 0.52 1.8E-05 41.3 4.7 66 57-130 32-104 (218)
46 2qqj_A Neuropilin-2; VEGF rece 87.5 0.59 2E-05 42.9 5.0 66 57-130 34-106 (325)
47 2qqm_A Neuropilin-1; VEGF rece 86.0 1.4 4.7E-05 42.1 6.9 69 57-130 321-394 (450)
48 2vm9_A Discoidin-2, discoidin 86.0 1.2 4.1E-05 39.8 6.1 55 69-130 49-106 (257)
49 2qqk_A Neuropilin-2; VEGF rece 81.7 2.2 7.6E-05 42.1 6.5 69 57-130 438-517 (579)
50 2qqj_A Neuropilin-2; VEGF rece 81.3 2.5 8.5E-05 38.6 6.3 70 57-131 190-270 (325)
51 2qqm_A Neuropilin-1; VEGF rece 79.9 1.6 5.3E-05 41.8 4.5 66 57-130 165-237 (450)
52 2qqo_A Neuropilin-2; VEGF rece 79.3 3.1 0.00011 39.8 6.5 69 57-130 319-398 (460)
53 3hny_M Coagulation factor VIII 77.3 1.6 5.5E-05 35.8 3.3 55 69-130 47-106 (159)
54 1sdd_B Coagulation factor V; c 76.2 2.8 9.7E-05 42.0 5.4 71 57-130 355-431 (647)
55 2yfu_A Carbohydrate binding fa 75.5 4.5 0.00016 33.4 5.6 65 58-130 24-94 (155)
56 3gdb_A Endo-D, putative unchar 63.0 1.5 5.2E-05 46.0 0.0 84 7-128 797-894 (937)
57 3zyj_B Netrin-G1; cell adhesio 62.9 1.8 6.2E-05 41.7 0.5 16 236-251 353-368 (426)
58 1sdd_B Coagulation factor V; c 61.0 7.2 0.00025 39.0 4.5 56 68-130 531-591 (647)
59 2e26_A Reelin, reeler protein; 59.8 8.5 0.00029 39.4 4.8 131 87-276 422-565 (725)
60 2r7e_B Coagulation factor VIII 54.7 7.5 0.00026 40.1 3.5 65 57-130 484-554 (770)
61 2qqk_A Neuropilin-2; VEGF rece 54.4 13 0.00043 36.6 5.0 55 69-130 293-354 (579)
62 4ag4_A Epithelial discoidin do 50.3 18 0.00063 33.7 5.1 44 86-130 59-108 (351)
63 2qqo_A Neuropilin-2; VEGF rece 49.9 12 0.0004 35.7 3.8 42 88-130 187-235 (460)
64 2ydt_A EXO-1,5-alpha-L-arabino 47.3 15 0.00051 34.3 4.0 21 111-131 54-74 (367)
65 4gz9_A Neuropilin-1, A5 protei 40.8 61 0.0021 31.8 7.5 43 87-130 465-512 (577)
66 2r7e_B Coagulation factor VIII 40.1 15 0.00052 37.8 3.1 55 69-130 654-713 (770)
67 3a72_A EXO-arabinanase; arabin 39.9 24 0.00084 32.6 4.2 21 112-132 50-70 (355)
68 2ydt_A EXO-1,5-alpha-L-arabino 37.4 26 0.00088 32.6 3.9 23 111-133 118-140 (367)
69 3e50_C Protransforming growth 31.7 22 0.00077 23.6 1.8 26 248-276 20-45 (50)
70 3a72_A EXO-arabinanase; arabin 29.2 25 0.00086 32.5 2.3 22 112-133 114-135 (355)
71 2wn3_A Discoidin-1 subunit A; 27.2 71 0.0024 28.0 4.9 53 69-130 48-105 (254)
72 3ecq_A Protein SPR0328, endo-a 27.0 13 0.00046 40.5 0.0 43 57-104 1470-1512(1531)
73 2rnl_A Amphiregulin; AR, color 26.7 29 0.00099 23.0 1.7 26 248-276 24-49 (50)
74 2gy5_A Angiopoietin-1 receptor 25.3 22 0.00075 33.8 1.2 24 260-283 262-286 (423)
75 2gy5_A Angiopoietin-1 receptor 23.4 22 0.00074 33.9 0.7 25 260-284 215-240 (423)
76 3u7u_G Neuregulin 1; signaling 22.3 26 0.00089 23.6 0.8 19 258-276 31-49 (55)
77 1edm_B Factor IX; epidermal gr 22.3 58 0.002 19.4 2.4 18 259-276 22-39 (39)
78 4gz9_A Neuropilin-1, A5 protei 22.1 88 0.003 30.7 4.9 55 69-130 294-355 (577)
79 1k36_A Epiregulin; EGF-like fo 21.9 47 0.0016 21.2 1.9 18 259-276 26-43 (46)
80 1iox_A Betacellulin; EGF-like 20.5 35 0.0012 22.4 1.1 26 248-276 20-45 (50)
81 1a3p_A Epidermal growth factor 20.2 45 0.0015 20.9 1.6 19 258-276 23-41 (45)
No 1
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=100.00 E-value=2.2e-91 Score=671.38 Aligned_cols=288 Identities=53% Similarity=1.023 Sum_probs=267.9
Q ss_pred CCCcCCCCccccccCCeeEEeccccCCCCCCCCCcceeecCCccCCcccccccCCC----CCCceeccCCCC--ceeEec
Q psy15469 1 MDNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDT----HPVRYLTDLSNT--TTWWQS 74 (297)
Q Consensus 1 ~~~~c~P~~~n~a~~~~~~a~sTCG~~~~~~~~e~yC~~~~~~~~~~~C~~Cd~~~----Hp~~~~~D~~~~--~twWQS 74 (297)
+||+|+|+|+|||+||+|+||||||+ +||+||++++..+..++|++||+++ ||+++|+|+++. .|||||
T Consensus 15 ~p~~C~P~~~N~a~~~~i~assTCG~-----~pe~yC~~~~~~~~~~~C~~Cda~~p~~~Hp~~~~~D~~~~~~~TwWQS 89 (375)
T 4aqt_A 15 RPQRCMPEFVNAAFNVTVVATNTCGT-----PPEEYCVQTGVTGVTKSCHLCDAGQQHLQHGAAFLTDYNNQADTTWWQS 89 (375)
T ss_dssp CBCCCCCCCEETTTTCCCEESCCTTS-----SCEEEECCC----CCCCEEEECSSSTTTCCCGGGGSSCCCSSSCCCEEC
T ss_pred CcCccCCchhhhccCCeeeEecCCCC-----CCcCeEEecCCcccCCcCCccCCCChhhhCCHhheeccCCCCCCceEEC
Confidence 58999999999999999999999996 8999999998776678899999984 999999997643 899999
Q ss_pred cccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCCCCCcEEEEEecCCCCCCeechhhHhhhhhhcCCCCCCCCCCCCCC
Q psy15469 75 TTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSD 154 (297)
Q Consensus 75 ~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sprP~sm~ieks~d~G~tW~p~qyfa~~C~~~f~~~~~~~~~~~~~~ 154 (297)
+++++|.++|++|||||||+++|||+||+|+|+++||++|+||||+|+|+||+||||||.||.+.|+|++++.+....++
T Consensus 90 ~~~~~~~~~~~~VtitLdL~~~f~~t~v~i~F~~~rP~~m~Iers~d~G~tw~p~qyfa~~C~~~f~~~~~~~~~~~~~~ 169 (375)
T 4aqt_A 90 QTMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDE 169 (375)
T ss_dssp CCGGGTCSSSCCEEEEEEEEEEEEEEEEEEEESSSCCSEEEEEEESSSSSCCEEEEEEETTHHHHHSCCTTCCCCTTSCT
T ss_pred CCccccCCCCcceEEEEcCCCeEEEEEEEEEecCCCCCcEEEEEecCCCCCccceeeeecchhHhcCCCCCCCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998877655578
Q ss_pred CceeeecCCCCCCCCCCCceeEEecCCCCCcCCCCCcHhhHhhhhcceeEEEEeecccCcccccCCccccceeeeeeece
Q psy15469 155 TRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADI 234 (297)
Q Consensus 155 ~~v~Ct~~ys~~~p~~~g~V~f~~l~~rp~~~~~~~s~~lqd~~tat~iRi~l~~~~~~~~~~~~~~~~~~~~yYai~~i 234 (297)
++||||++||++.|+++|+|+|++|+|||++.+|++|++||||++||||||+|+|+++++++++.++.++++|||||+||
T Consensus 170 ~~viCt~~ys~~~p~~~g~v~~~~l~~rp~~~~~~~s~~lq~~~~at~iRi~l~~~~~~~~~~~~~~~~~~~yyYai~di 249 (375)
T 4aqt_A 170 QQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNEPKVLKSYYYAISDF 249 (375)
T ss_dssp TCCEEESTTCSCCSSSCEEEEEETTTTCTTGGGGGGCHHHHHHTEEEEEEEEEEECCCCSGGGSCCHHHHTTCCCEEEEE
T ss_pred CeeEeCCcCCCCcCCcCCeEEEEeccCCCCcccCCcCHHHhhhhhheeeeeeecccccCcccccccccccccceeeeccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccCCCCCCCCCCcccCCCCcceEecCCCCCCCCCCCcCCccCCCCCCCCCC-CCCCCCC
Q psy15469 235 SVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANECR 297 (297)
Q Consensus 235 ~v~g~C~CnGHA~~C~~~~~~~~~~~~~C~C~HnT~G~~Ce~C~p~y~~~Pw~~a~-~~~n~C~ 297 (297)
.|+|+|.||||++.|... ....+.|.|+|||+|.+|++|+++|++.||++|+ ..++.|+
T Consensus 250 ~v~g~C~Cngh~s~c~~~----~~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~ 309 (375)
T 4aqt_A 250 AVGGRCKCNGHASECVKN----EFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECL 309 (375)
T ss_dssp EEEEEECCTTSCSCEEEC----TTSCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCC
T ss_pred ccCceecCCCCCcccCCC----CCCCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCC
Confidence 999999999999999743 3456788999999999999999999999999999 8888874
No 2
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.4e-87 Score=648.39 Aligned_cols=288 Identities=38% Similarity=0.758 Sum_probs=236.7
Q ss_pred CCcCCCCccccccCCeeEEeccccCCCCC------CCCCcceeecCCcc---------CCcccccccCCC----CCCcee
Q psy15469 2 DNRCIPPFENAAFSASVESTNTCGYQNGV------PQPTRFCVQSGTHV---------TANTCDYCYEDT----HPVRYL 62 (297)
Q Consensus 2 ~~~c~P~~~n~a~~~~~~a~sTCG~~~~~------~~~e~yC~~~~~~~---------~~~~C~~Cd~~~----Hp~~~~ 62 (297)
.+.|+|+|+|||+|++|+|+||||+ ++. |.+|+||++.+... ..++|++||+++ ||+++|
T Consensus 8 ~~~c~P~~~Nla~~~~i~assTCG~-~~~~~~~~~p~~e~yC~~~~~~~~~~~~~~~~~~~~C~~Cda~~p~~~Hp~~~~ 86 (403)
T 2y38_A 8 GFSLHPPYFNLAEGARITASATCGE-EAPTRSVSRPTEDLYCKLVGGPVAGGDPAQTIQGQYCDICTAANSNKAHPVSNA 86 (403)
T ss_dssp CCCBCCCCEETTTTCEEEESSCC---------------------------------------------------CCGGGT
T ss_pred CCccCCcccccccCCeeEEEeCCCC-CCCCccccCCcccccceeccCCcccccccccccCCccCccCCCCccccCcHHHh
Confidence 5789999999999999999999998 611 22499999976421 236799999984 999999
Q ss_pred ccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe-CCCCCcEEEEEecCCCCCCeechhhHh---hhhh
Q psy15469 63 TDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFAIYKKTYENSSWTPFQFYSA---SCQE 138 (297)
Q Consensus 63 ~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~-sprP~sm~ieks~d~G~tW~p~qyfa~---~C~~ 138 (297)
+|. ..|||||+++.+|.++ ++|||||||+++|||+||+|+|. ||||++|+||||+|+|+||+||||||. ||.+
T Consensus 87 ~D~--~~twWQS~~~~~g~~~-~~V~itLdL~~~f~~t~v~l~F~~spRP~~m~ierS~D~G~tW~p~qyfa~~~~dC~~ 163 (403)
T 2y38_A 87 IDG--TERWWQSPPLSRGLEY-NEVNVTLDLGQVFHVAYVLIKFANSPRPDLWVLERSTDFGHTYQPWQFFASSKRDCLE 163 (403)
T ss_dssp TSS--SSCCEECCCSTTCSST-TCCEEEEEEEEEEEEEEEEEEECSSCCCSEEEEEEESSSSSSEEEEEEECSSHHHHHH
T ss_pred ccC--CceeeccCCccCCCcc-ccceeEEeCCCcEEEEEEEEEecCCCCCCeEEEEeccCCCCCccceecccCCccchhh
Confidence 994 4899999999988775 68999999999999999999995 999999999999999999999999996 9999
Q ss_pred hcCCCCCCCCCCCCCCCceeeecCCCCCCCCCCCceeEEecCCCCCcCCCCCcHhhHhhhhcceeEEEEeecccCccccc
Q psy15469 139 TYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF 218 (297)
Q Consensus 139 ~f~~~~~~~~~~~~~~~~v~Ct~~ys~~~p~~~g~V~f~~l~~rp~~~~~~~s~~lqd~~tat~iRi~l~~~~~~~~~~~ 218 (297)
+|||+++..+.+ +++|+||++||++.|+++|+|+|++|+|||++.+|++|++||||++||||||+|+|+++++++++
T Consensus 164 ~fg~~~~~~~~~---~~~viCt~~ys~~~P~~~g~v~f~~l~gRP~~~~~~~s~~lq~~~~aT~iRi~~~~~~t~~~~l~ 240 (403)
T 2y38_A 164 RFGPRTLERITQ---DDDVICTTEYSRIVPLENGEIVVSLVNGRPGALNFSYSPLLRDFTKATNIRLRFLRTNTLLGHLM 240 (403)
T ss_dssp HTCTTTTSCCCS---TTCCCEECSTTCSSSCSSCEEEEESSSSSGGGTTGGGCHHHHHHHEEEEEEEEEEECCCCTTCHH
T ss_pred hcCCCCCCCCCC---CCceeeeccCCCCcCCCCCeEEEEecCCCCCcccCCcCHHHHhhhccceEEEEEEecCccccccc
Confidence 999998877664 46899999999999999999999999999999999999999999999999999999999987643
Q ss_pred ----CCccccceeeeeeeceeecccccCCCCCCCCCCcccCCCCcceEecCCCCCCCCCCCcCCccCCCCCCCCCC-CCC
Q psy15469 219 ----LDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDA 293 (297)
Q Consensus 219 ----~~~~~~~~~yYai~~i~v~g~C~CnGHA~~C~~~~~~~~~~~~~C~C~HnT~G~~Ce~C~p~y~~~Pw~~a~-~~~ 293 (297)
.++.+.++|||||++|.++|+|+|||||++|.+... .....++|.|+|||+|.+||+|+|+|+++||++|+ +.+
T Consensus 241 ~~~~~~~~~~~~yyyai~~~~vgg~C~CnGHA~~C~~~~~-~~~~~g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~ 319 (403)
T 2y38_A 241 GKALRDPTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDP-LDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSA 319 (403)
T ss_dssp HHHHTCTTTGGGCCCEEEEEEEEEECCCTTBCSCEEESCT-TSTTCEEECCCTTEESSSCCEECTTCCSSCCCCCCSSCC
T ss_pred ccccccccccccceeecccCccccccccCCCccccCCCCC-CCccceEeECcCcCcCCCCCCCCccccCCcccccccCCC
Confidence 477888999999999999999999999999985421 12346889999999999999999999999999999 888
Q ss_pred CCCC
Q psy15469 294 NECR 297 (297)
Q Consensus 294 n~C~ 297 (297)
++|+
T Consensus 320 ~~C~ 323 (403)
T 2y38_A 320 NECQ 323 (403)
T ss_dssp CCCC
T ss_pred cccc
Confidence 8885
No 3
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=100.00 E-value=1.5e-85 Score=619.21 Aligned_cols=276 Identities=33% Similarity=0.600 Sum_probs=240.9
Q ss_pred CcCCCCccccccCCeeEE---eccccCCCCCCCCCcceeecCCccCCccc-ccccCCC----CCCceeccCC--CCceeE
Q psy15469 3 NRCIPPFENAAFSASVES---TNTCGYQNGVPQPTRFCVQSGTHVTANTC-DYCYEDT----HPVRYLTDLS--NTTTWW 72 (297)
Q Consensus 3 ~~c~P~~~n~a~~~~~~a---~sTCG~~~~~~~~e~yC~~~~~~~~~~~C-~~Cd~~~----Hp~~~~~D~~--~~~twW 72 (297)
++|.|+|+|||.|++|.+ ++|||. ++|+||++.+ ..+| ++||+++ ||+++|+|.+ ++.|||
T Consensus 20 ~~C~P~~~nla~~~~~~~~~~~sTCG~-----~pe~yC~~~~----~~~C~~~CDa~~p~~aHP~~~ltD~~~~~~~TwW 90 (338)
T 3tbd_A 20 YACQPKVMRLKDYVKVKVEPSGITCGD-----PPERFCSHEN----PYLCSNECDASNPDLAHPPRLMFDKEEEGLATYW 90 (338)
T ss_dssp CCBCCCCEEGGGGCEEEEESTTCBSCS-----SCEEECCSSC----CSSCCEEECTTSTTTCCCGGGGSSCCCTTCCCCE
T ss_pred cccCCCccchhcCeeEEeccCCCCcCc-----ChhhheecCC----cccccccccCCCccccCCHHHhccCCCCCCCcee
Confidence 589999999999999999 799996 8999999965 3467 6999983 9999999976 349999
Q ss_pred eccccCCCCCCCCeeeEEEecCceEEEE-EEEEEEeCCCCCcEEEEEecCCCCCCeechhhHhhhhhhcCCCCCCC--CC
Q psy15469 73 QSTTMYDGVQWPNQVNITLKFGKTFDVT-YVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNS--GK 149 (297)
Q Consensus 73 QS~~~~~g~~~~~~V~itLdL~~~f~v~-~v~l~F~sprP~sm~ieks~d~G~tW~p~qyfa~~C~~~f~~~~~~~--~~ 149 (297)
||+++.++. .|++|||||||+|+|||+ ||+|+|+||||++|+||||+|+|+||+||||||+||.+.|||+++.. +.
T Consensus 91 QS~~~~~~~-~p~~VnlTL~L~k~felt~~iil~F~spRP~sm~ierS~D~G~tW~P~QYfA~dC~~~Fg~~~~~~~~~~ 169 (338)
T 3tbd_A 91 QSITWSRYP-SPLEANITLSWNKTVELTDDVVMTFEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFGMSARRARDMS 169 (338)
T ss_dssp EBCCSTTTT-SCCCEEEEEEEEEEEEECSCEEEEESSCCCSEEEEEEESSTTSSCEEEEEEESSHHHHHSCCBCCGGGCC
T ss_pred ccCcccCCC-CCccceEEEcCCCeEEEEEEEEeecCCCCCCeEEEEeccCCCCCceeehhhhhhhHHhcCCCCccccCcc
Confidence 999998754 457899999999999999 89999999999999999999999999999999999999999988752 33
Q ss_pred CCCCCCceeeecCCCCCCC-CCCCceeEEecC-----CCCCcCCC-------CCcHhhHhhhhcceeEEEEeecccCccc
Q psy15469 150 ANDSDTRVFCTSEYSDLSP-LTGGAVPFATLE-----GRYRAKTF-------SYNLNLQEFVTATEIRITLDRLNTFYDE 216 (297)
Q Consensus 150 ~~~~~~~v~Ct~~ys~~~p-~~~g~V~f~~l~-----~rp~~~~~-------~~s~~lqd~~tat~iRi~l~~~~~~~~~ 216 (297)
.. ++++|+||++||++.| .++|+|+|+++. ..|++.++ ++|++||||++||||||+|+|+++.|+.
T Consensus 170 ~~-~~~eviCt~~yS~~~P~~~gg~v~f~v~~r~~~~~gP~~~~~~~~y~~~~~s~~Lqd~~taT~iRi~l~r~~~~~~~ 248 (338)
T 3tbd_A 170 SS-SAHRVLCTEEYSRWAGSKKEKHVRFEVRDRFAIFAGPDLRNMDNLYTRLESAKGLKEFFTLTDLRMRLLRPALGGTY 248 (338)
T ss_dssp GG-GTTCCCEECTTTTTTTSSCCCEEEECSHHHHHHHHTTTTCCHHHHHHHHHHSTTHHHHTEEEEEEEEEEECCCTTSC
T ss_pred CC-CCCccEECCCCCCCCCCCCCceEEEEecccccccCCCccccccccccccccCHHHHHhhhheeeeeEeeccccCccc
Confidence 22 6789999999999999 567899998753 12776653 4589999999999999999999877654
Q ss_pred ccCCccccceeeeeeeceeecccccCCCCCCCCCCcccCCCCcceEecCCCCCCCCCCCcCCccCCCCCCCCCC------
Q psy15469 217 LFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS------ 290 (297)
Q Consensus 217 ~~~~~~~~~~~yYai~~i~v~g~C~CnGHA~~C~~~~~~~~~~~~~C~C~HnT~G~~Ce~C~p~y~~~Pw~~a~------ 290 (297)
+ +..++++|||||+||.|+|+|+|||||++|.+.. +.++|.|+|||+|++||+|+|+|+++||+||+
T Consensus 249 ~--~~~~~~~yyYAI~di~v~G~C~CnGHA~~C~~~~-----g~~~C~C~HnT~G~~Ce~C~p~y~~~pw~pg~~~Plp~ 321 (338)
T 3tbd_A 249 V--QRENLYKYFYAISNIEVIGRCKCNLHANLCSMRE-----GSLQCECEHNTTGPDCGKCKKNFRTRSWRAGSYLPLPH 321 (338)
T ss_dssp C--CTTCGGGCCCEEEEEECEEEECCTTBCSCEEEET-----TEEEECCCTTEESTTSCEECTTCBSSCCCCCBCCSTTT
T ss_pred c--cccccceeEEEeecceeeccccccCCcCccCCCC-----CCceecCCCCCCCCCCcccCccccCCCCCCCCcCCCCC
Confidence 3 4456799999999999999999999999998642 46789999999999999999999999999998
Q ss_pred CCCCCC
Q psy15469 291 DDANEC 296 (297)
Q Consensus 291 ~~~n~C 296 (297)
+.+|.|
T Consensus 322 gs~n~~ 327 (338)
T 3tbd_A 322 GSPNAC 327 (338)
T ss_dssp CBCCCC
T ss_pred CChhhh
Confidence 356766
No 4
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=100.00 E-value=3.8e-84 Score=626.82 Aligned_cols=277 Identities=34% Similarity=0.641 Sum_probs=245.5
Q ss_pred CCcCCCCccccccCCeeEE---eccccCCCCCCCCCcceeecCCccCCccc-ccccCCC----CCCceeccCCC--Ccee
Q psy15469 2 DNRCIPPFENAAFSASVES---TNTCGYQNGVPQPTRFCVQSGTHVTANTC-DYCYEDT----HPVRYLTDLSN--TTTW 71 (297)
Q Consensus 2 ~~~c~P~~~n~a~~~~~~a---~sTCG~~~~~~~~e~yC~~~~~~~~~~~C-~~Cd~~~----Hp~~~~~D~~~--~~tw 71 (297)
+++|+|+|+|||+|++|.+ +||||. +||+||++.+ .++| ++||+++ ||+++|+|.++ +.||
T Consensus 47 ~~~C~P~~~n~a~~~~v~~~~assTCG~-----~pe~yC~~~~----~~~C~~~Cda~~p~~aHp~~~~tD~~~~~~~tw 117 (426)
T 3zyj_B 47 YMACQPESTDMTKYLKVKLDPPDITCGD-----PPETFCAMGN----PYMCNNECDASTPELAHPPELMFDFEGRHPSTF 117 (426)
T ss_dssp EBCCCCCCEEGGGTCEEEEESGGGBSCS-----SCEECCCSSC----TTCCCCEECSSSTTTCCCGGGGGSCC----CCC
T ss_pred CccCCCcHHhHhcCCeeeeeccCcccCC-----CccceeeccC----CCcccCcccCCCccccCCHHHeecCCCCCCCce
Confidence 4899999999999999985 999996 8999999854 4689 9999984 99999999864 4899
Q ss_pred EeccccCCCCCCCCeeeEEEecCceEEEE-EEEEEEeCCCCCcEEEEEecCCCCCCeechhhHhhhhhhcCCCCCCC--C
Q psy15469 72 WQSTTMYDGVQWPNQVNITLKFGKTFDVT-YVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNS--G 148 (297)
Q Consensus 72 WQS~~~~~g~~~~~~V~itLdL~~~f~v~-~v~l~F~sprP~sm~ieks~d~G~tW~p~qyfa~~C~~~f~~~~~~~--~ 148 (297)
|||+++.++ +.|++|||||||+++|||+ ||+|+|+||||++|+||||+|+|+||+||||||.||.++|||+++.. +
T Consensus 118 WQS~~~~~~-~~p~~V~itLdL~~~f~~t~~i~l~F~spRP~am~ierS~D~G~tW~p~qYfA~dC~~~Fg~~~~~~~~~ 196 (426)
T 3zyj_B 118 WQSATWKEY-PKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHMDPKSVKDL 196 (426)
T ss_dssp EEBCCCCSC-SSCCCEEEEEEEEEEEEECSCEEEEESSCCCSEEEEEEESSTTSSCEEEEEEESSHHHHTSCCCCCGGGC
T ss_pred ecCCcccCC-CCccceeEEEcCCCcEEEEEEEEeecCCCCCCeEEEEeccCCCCCceehHHHhhhhHHhcCCCccccccc
Confidence 999998865 3457899999999999999 79999999999999999999999999999999999999999988642 3
Q ss_pred CCCCCCCceeeecCCCCCCCCCCCceeEEe------cCCCCCcCCC-------CCcHhhHhhhhcceeEEEEeecccCcc
Q psy15469 149 KANDSDTRVFCTSEYSDLSPLTGGAVPFAT------LEGRYRAKTF-------SYNLNLQEFVTATEIRITLDRLNTFYD 215 (297)
Q Consensus 149 ~~~~~~~~v~Ct~~ys~~~p~~~g~V~f~~------l~~rp~~~~~-------~~s~~lqd~~tat~iRi~l~~~~~~~~ 215 (297)
.+. ++++|+||++||++.|+++|||+|++ ++| |++.++ ++|++||||++||||||+|+|+++++.
T Consensus 197 ~~~-~~~~viCt~~yS~~~P~~~GeV~f~~~~~f~~~~g-P~~~~~~~~y~~~~~S~~Lqd~~taT~iRi~l~r~~t~~~ 274 (426)
T 3zyj_B 197 SQH-TVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAG-PRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEI 274 (426)
T ss_dssp CSS-CSSCCCEECTTTCSSSTTTTEEEECSHHHHHHHHC-SSCCCHHHHHHHHHHCHHHHHHSEEEEEEEEEEECCCSSS
T ss_pred CCC-CCCcceeCCCCCCCCCCCCCEEEEEeccccccccC-CCcccccccccccccCHHHHhhhcceeEEEEEeccccCCc
Confidence 333 67899999999999999999999996 345 887763 679999999999999999999999774
Q ss_pred cccCCccccceeeeeeeceeecccccCCCCCCCCCCcccCCCCcceEecCCCCCCCCCCCcCCccCCCCCCCCCC-----
Q psy15469 216 ELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS----- 290 (297)
Q Consensus 216 ~~~~~~~~~~~~yYai~~i~v~g~C~CnGHA~~C~~~~~~~~~~~~~C~C~HnT~G~~Ce~C~p~y~~~Pw~~a~----- 290 (297)
+.|+.++++|||||+||.|+|+|+|||||+.|.+.. +.++|.|+|||+|++||+|+|+|+++||++|+
T Consensus 275 --~~~~~~~~~yyYAI~d~~v~g~C~CnGHas~C~~~~-----g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~ 347 (426)
T 3zyj_B 275 --FVDELHLARYFYAISDIKVRGRCKCNLHATVCVYDN-----SKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIP 347 (426)
T ss_dssp --SCCSSCGGGCCCEEEEEECEEEECCSSSCSCEEEET-----TEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSS
T ss_pred --cccccccceecceeecccccccCcCCCchhhcCCCC-----CCceeeCCCCCcCCCccccccccccCcccCCcccccC
Confidence 457788999999999999999999999999998542 45799999999999999999999999999874
Q ss_pred -CCCCCCC
Q psy15469 291 -DDANECR 297 (297)
Q Consensus 291 -~~~n~C~ 297 (297)
+.+++|+
T Consensus 348 ~g~~~~C~ 355 (426)
T 3zyj_B 348 KGAANACI 355 (426)
T ss_dssp SCBCCCCC
T ss_pred CCCCCccc
Confidence 4677774
No 5
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=100.00 E-value=5.2e-80 Score=615.71 Aligned_cols=280 Identities=29% Similarity=0.619 Sum_probs=248.2
Q ss_pred CCcCCCCccccccCC--eeEEeccccCCCCCCCCCcceeecCCccCCcccccccCCC------CCCceeccCC-------
Q psy15469 2 DNRCIPPFENAAFSA--SVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDT------HPVRYLTDLS------- 66 (297)
Q Consensus 2 ~~~c~P~~~n~a~~~--~~~a~sTCG~~~~~~~~e~yC~~~~~~~~~~~C~~Cd~~~------Hp~~~~~D~~------- 66 (297)
.+.|+|+|+|||+|| +|+|+||||+ + +||+||++++... ..+|++||+++ ||++||+|..
T Consensus 15 ~~~c~p~~~n~~~~~~~~~~~~~tCG~-~---~~e~~c~~~~~~~-~~~c~~Cd~~~p~~~~~hp~~~~~~~~~~~~~~~ 89 (525)
T 4aqs_A 15 EGSCYPATGDLLIGRAQKLSVTSTCGL-H---KPEPYCIVSHLQE-DKKCFICDSRDPYHETLNPDSHLIENVVTTFAPN 89 (525)
T ss_dssp GSCBCCCCEESSTTCGGGEECSCCTTS-S---SCEEEEEECSSSS-CEEEEEECCSSCCBTTTBTTCCCGGGSSCC----
T ss_pred CCCcCCCchhhhcCCCCcEEEecCCCC-C---CCcceeccCCCCC-CCcCCcCcCCCCcccccCChhhccccccccccCC
Confidence 368999999999997 5999999998 7 9999999987653 56799999983 9999999842
Q ss_pred CCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCCCCCcEEEEEecCCCCCCeechhhHhhhhhhcCCCCCC
Q psy15469 67 NTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDN 146 (297)
Q Consensus 67 ~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sprP~sm~ieks~d~G~tW~p~qyfa~~C~~~f~~~~~~ 146 (297)
...|||||+++. ++|||||||+|+|||+||+|+|+||||++||||||+|+|+||+||||||+||+++|+|++..
T Consensus 90 ~~~~wwqs~~~~------~~v~itl~l~~~~~~~~v~~~f~s~rP~~~~ieks~d~g~tw~p~qy~a~~C~~~f~~~~~~ 163 (525)
T 4aqs_A 90 RLKIWWQSENGV------ENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKAWGVYRYFAYDCESSFPGISTG 163 (525)
T ss_dssp -CCCCEECCTTC------CCCEEEEEEEEEEEEEEEEEEESSCCCSEEEEEEESSTTSSCEEEEEEESSTTTTSSSSCCS
T ss_pred CCcccccCCCCC------cCeEEEEcCCCeEEEEEEEEEEECCCCCeEEEEEecCCCCCCcceeeehhhhhhhcCCCCCC
Confidence 238999999753 47999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCceeeecCCCCCCCCCCCceeEEecCCCCCcCCCCCcHhhHhhhhcceeEEEEeecccCcccccC-Cccccc
Q psy15469 147 SGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL-DPSVLR 225 (297)
Q Consensus 147 ~~~~~~~~~~v~Ct~~ys~~~p~~~g~V~f~~l~~rp~~~~~~~s~~lqd~~tat~iRi~l~~~~~~~~~~~~-~~~~~~ 225 (297)
++.. .++||||++||++.|+++|+|+|++|++||++. +++|++||||++||||||+|+|+++++++++. ++.+++
T Consensus 164 ~~~~---~~~v~Ct~~~s~~~p~~~g~v~~~~~~~~~~~~-~~~s~~l~~~~~~t~iri~~~~~~~~~~~~~~~~~~~~~ 239 (525)
T 4aqs_A 164 PMKK---VDDIICDSRYSDIEPSTEGEVIFRALDPAFKIE-DPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIRE 239 (525)
T ss_dssp CCSS---TTCCCEECTTCCSCSTTTCEEEEESSCSSSCCS-CTTSHHHHHHHEEEEEEEEEEECCCTTCCCTTCCHHHHT
T ss_pred CCCC---CCcceecccCCCCCCCCCCeEEEEecCCCcccC-CCCChhhhhhhhhhhhhhheecccccccccccccccccc
Confidence 7664 468999999999999999999999999999875 57899999999999999999999999988764 456788
Q ss_pred eeeeeeeceeecccccCCCCCCCCCCcccC----CCCcceEecCCCCCCCCCCCcCCccCCCCCCCCCC-CCCCCC
Q psy15469 226 SYFYAIADISVGARCKCNGHASECPYVRQS----DGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANEC 296 (297)
Q Consensus 226 ~~yYai~~i~v~g~C~CnGHA~~C~~~~~~----~~~~~~~C~C~HnT~G~~Ce~C~p~y~~~Pw~~a~-~~~n~C 296 (297)
+|||||+||.|+|+|.|||||..|.+..+. .+...+.|.|+|+|+|.+||+|.++|++.||.+++ ...+.|
T Consensus 240 ~~~Yai~di~v~grC~CnGHa~~C~p~~g~~~~~~g~~~g~C~C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~ 315 (525)
T 4aqs_A 240 KYYYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNAC 315 (525)
T ss_dssp TCCCEEEEEEEEEECCCTTBCSCEECC------CCSCCCCEECCCTTEESSSSCEECTTCCSSCCCCCBTTBCCCC
T ss_pred cccEEEEeeEECeEeccCCccccCCCcCCcccCCCCCcCccccCcCCCcCCCCcCCCCccCCCccCCCcccCCCcc
Confidence 999999999999999999999999865421 34456789999999999999999999999999988 555443
No 6
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A*
Probab=98.53 E-value=2.7e-07 Score=78.22 Aligned_cols=85 Identities=19% Similarity=0.200 Sum_probs=66.9
Q ss_pred CCccccccCCeeEEeccccCCCCCCCCCcceeecCCccCCcccccccCCCCCCceeccCCCCceeEeccccCCCCCCCCe
Q psy15469 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQ 86 (297)
Q Consensus 7 P~~~n~a~~~~~~a~sTCG~~~~~~~~e~yC~~~~~~~~~~~C~~Cd~~~Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~ 86 (297)
|...|||.|++++|+|+-+. +++++++|.+ ..|+|.|.... ..
T Consensus 24 ~~~~NLA~~k~ataSs~~~~------------------------------~~a~~AvDGn-~~T~W~s~~~~------~~ 66 (161)
T 4a3z_A 24 ANYVNIAENKNVSGSNSQSG------------------------------NPLSNITDGD-LSSLWISDNGA------MP 66 (161)
T ss_dssp --CCBTTTTCCEEESCBCTT------------------------------CCGGGGSSSC-TTCCEEBGGGC------SS
T ss_pred CCcccccCCCceEEeCCcCC------------------------------CChhhcCcCC-CCCeEEcCCCC------CC
Confidence 56689999999999877542 4688899974 68999997532 14
Q ss_pred eeEEEecCceEEEEEEEEEEeCC-CCCcEEEEEecCCCCCCeec
Q psy15469 87 VNITLKFGKTFDVTYVRLLFWSP-RPESFAIYKKTYENSSWTPF 129 (297)
Q Consensus 87 V~itLdL~~~f~v~~v~l~F~sp-rP~sm~ieks~d~G~tW~p~ 129 (297)
--|+|||++.+.|..|.|.|... +...+.||-| ++|.+|+..
T Consensus 67 ~Wi~VDLg~~~~v~~v~i~~~~~~~~~~y~IevS-~Dg~~W~~v 109 (161)
T 4a3z_A 67 ANATIDLEGNNFVDFLELHFEKEGFRFQFKVEVE-DESGNRETV 109 (161)
T ss_dssp EEEEEEEEEEEEEEEEEEECSSTTCCEEEEEEEE-CTTCCEEEE
T ss_pred eEEEEECCCcEEEeEEEEEECCCCceEEEEEEEE-cCCCCEEEE
Confidence 68999999999999999999653 6778999887 568899864
No 7
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=98.51 E-value=1.8e-08 Score=97.10 Aligned_cols=62 Identities=34% Similarity=0.739 Sum_probs=48.0
Q ss_pred eecccccCCCCCCCCCCcccC-----------CCCcceEe-cCCCCCCCCCCCcCCccCCCCCCCCCCCCCCCCC
Q psy15469 235 SVGARCKCNGHASECPYVRQS-----------DGSTRRVC-RCEHNTAGPDCNECAPFYNDAPWRRASDDANECR 297 (297)
Q Consensus 235 ~v~g~C~CnGHA~~C~~~~~~-----------~~~~~~~C-~C~HnT~G~~Ce~C~p~y~~~Pw~~a~~~~n~C~ 297 (297)
..+..|.||||+..|.++... ...+.|+| .|+|||+|.+||+|+++|++.|++++ ..+++|+
T Consensus 320 ~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC~~GYyg~p~~~~-~~~~~C~ 393 (403)
T 2y38_A 320 NECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQPL-DSPHVCR 393 (403)
T ss_dssp CCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSCEECTTCEECTTSCT-TSTTSEE
T ss_pred ccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCcCcCCCCCcCCCCccCCCCCCC-CCCCccc
Confidence 457789999999999643210 01357899 59999999999999999999999876 4555553
No 8
>3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A*
Probab=97.87 E-value=5.2e-05 Score=63.00 Aligned_cols=87 Identities=15% Similarity=0.108 Sum_probs=63.1
Q ss_pred CccccccCCeeEEeccccCCCCCCCCCcceeecCCccCCcccccccCCCCCCceeccCCCCceeEeccccCC-CCCCCCe
Q psy15469 8 PFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYD-GVQWPNQ 86 (297)
Q Consensus 8 ~~~n~a~~~~~~a~sTCG~~~~~~~~e~yC~~~~~~~~~~~C~~Cd~~~Hp~~~~~D~~~~~twWQS~~~~~-g~~~~~~ 86 (297)
.-.|||+|+++++||+-+. +++++++|.+ ..|.|.+..-.. ..+ .+
T Consensus 8 ~~~NlA~~k~ataSS~~~~------------------------------~~a~~AvDG~-~~t~W~~~~ct~t~~~--~~ 54 (153)
T 3lei_A 8 ETENIARGKQASQSSTAYG------------------------------GAATRAVDGN-VDSDYGHHSVTHTNFE--DN 54 (153)
T ss_dssp CSCCTTTTCEEEESCCCTT------------------------------CCGGGGGSSC-CCCCGGGTCSCCCCSB--TT
T ss_pred CCcccCCCCCeeECCCcCC------------------------------CCccccccCC-CCCccccCccccCCCC--CC
Confidence 4579999999999988753 3677889974 588898632211 011 23
Q ss_pred eeEEEecCceEEEEEEEEEEeCC------CCCcEEEEEecCCCCCCee
Q psy15469 87 VNITLKFGKTFDVTYVRLLFWSP------RPESFAIYKKTYENSSWTP 128 (297)
Q Consensus 87 V~itLdL~~~f~v~~v~l~F~sp------rP~sm~ieks~d~G~tW~p 128 (297)
--|+|||++.+.|..|+| +... |-..+-|+-+.++|.+|..
T Consensus 55 ~W~~VDLg~~~~v~~V~i-~~~~d~~~~~r~~~~~I~vs~~dg~~w~~ 101 (153)
T 3lei_A 55 AWWQVDLGKTENVGKVKL-YNRGDGNVANRLSNFDVVLLNEAKQEVAR 101 (153)
T ss_dssp CEEEEEEEEEEEEEEEEE-EECCSTTCGGGSCSEEEEEECTTCCEEEE
T ss_pred CeEEEECCCceEEeEEEE-EeCCCCcccccceeEEEEEECCCCCcccc
Confidence 579999999999999999 6422 4456778778778888864
No 9
>4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A*
Probab=97.73 E-value=6e-05 Score=63.08 Aligned_cols=88 Identities=15% Similarity=0.100 Sum_probs=63.2
Q ss_pred CccccccCCeeEEeccccCCCCCCCCCcceeecCCccCCcccccccCCCCCCceeccCCCCceeEeccccCC-CCCCCCe
Q psy15469 8 PFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYD-GVQWPNQ 86 (297)
Q Consensus 8 ~~~n~a~~~~~~a~sTCG~~~~~~~~e~yC~~~~~~~~~~~C~~Cd~~~Hp~~~~~D~~~~~twWQS~~~~~-g~~~~~~ 86 (297)
+-.|||+|+++++||+-.. +++++++|.+ ..|.|.+..-.. ... .+
T Consensus 8 ~~~NlA~~k~ataSS~~~~------------------------------~~a~~AvDG~-~~t~w~~~sct~t~~~--~~ 54 (153)
T 4gwi_A 8 ETENIARGKQASQSSTAHG------------------------------GAATRAVDGN-VDSDYGHHSVTHTNFE--DN 54 (153)
T ss_dssp CSCCTTTTCEEEESCCCTT------------------------------CCGGGGGSSC-CCCCGGGTCCCCCCSB--TT
T ss_pred CccccCCCCceEEcCCCCC------------------------------CCcceeEcCC-CCCcccccccccCCCC--CC
Confidence 3469999999999887542 3678889974 588898642211 111 24
Q ss_pred eeEEEecCceEEEEEEEEEEe-----CCCCCcEEEEEecCCCCCCee
Q psy15469 87 VNITLKFGKTFDVTYVRLLFW-----SPRPESFAIYKKTYENSSWTP 128 (297)
Q Consensus 87 V~itLdL~~~f~v~~v~l~F~-----sprP~sm~ieks~d~G~tW~p 128 (297)
--|+|||++.+.|..|+|.-. ..|-..+-|+-++.+|.+|..
T Consensus 55 ~W~~VDLg~~~~v~~V~i~nr~d~~~~~r~~~~~I~v~s~dg~~w~~ 101 (153)
T 4gwi_A 55 AWWQVDLGKTENVGKVKLYNRGDGNVANRLSNFDVVLLNEAKQEVAR 101 (153)
T ss_dssp CEEEEEEEEEEEEEEEEEEECCSTTCGGGSCSEEEEEECTTSCEEEE
T ss_pred CEEEEECCCCEEEEEEEEEcccCCchhhcccceEEEEECCCCCeeee
Confidence 579999999999999999742 346666777666667888865
No 10
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=97.65 E-value=0.0001 Score=72.40 Aligned_cols=83 Identities=16% Similarity=0.226 Sum_probs=67.5
Q ss_pred cccccCCeeEEeccccCCCCCCCCCcceeecCCccCCcccccccCCCCCCceeccCCCCceeEeccccCCCCCCCCeeeE
Q psy15469 10 ENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNI 89 (297)
Q Consensus 10 ~n~a~~~~~~a~sTCG~~~~~~~~e~yC~~~~~~~~~~~C~~Cd~~~Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~i 89 (297)
.|||.|++++|||+-|. . +.+++++|.+ ..|+|.+.... ....|
T Consensus 325 ~NLA~~~~vtASS~~~~--------~---------------------~~~~~a~Dgd-~~TyW~a~~~~------~~~wl 368 (469)
T 3eyp_A 325 TNLLRGAKVKATNVRGA--------K---------------------YSPEKMLDNE-KNTYFAGKDGE------VKADI 368 (469)
T ss_dssp CCTTTTCEEEESSCCCG--------G---------------------GCGGGGGSCC-SSCCEECCTTC------CCEEE
T ss_pred cchhcCCceEEeeccCC--------C---------------------CChhhcccCC-CCceEeCCCCC------CCcEE
Confidence 59999999999998772 1 4788999964 69999998542 13589
Q ss_pred EEecCceEEEEEEEEEEe---CCCCCcEEEEEecCCCCCCeec
Q psy15469 90 TLKFGKTFDVTYVRLLFW---SPRPESFAIYKKTYENSSWTPF 129 (297)
Q Consensus 90 tLdL~~~f~v~~v~l~F~---sprP~sm~ieks~d~G~tW~p~ 129 (297)
+|||++...|..|+|+-. +.|=.+..||-| ++|++|++.
T Consensus 369 ~vDLg~~~~vn~V~lqe~i~~gqrv~~y~Ve~s-~DG~~W~~v 410 (469)
T 3eyp_A 369 IFTLPKTIEFDCLMIEEVIELGHRTTKWSVEYT-VDGKNWITI 410 (469)
T ss_dssp EEEEEEEEEEEEEEEEECGGGCSCEEEEEEEEE-SSSSCCEEC
T ss_pred EEECCCCcEEeEEEEeecccCCCCeEEEEEEEE-cCCCceEEE
Confidence 999999999999999975 567788999886 469899984
No 11
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens}
Probab=97.62 E-value=0.00011 Score=60.90 Aligned_cols=63 Identities=17% Similarity=0.356 Sum_probs=49.8
Q ss_pred CCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCCCCCcEEEEEecCCCCCCeec
Q psy15469 58 PVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPF 129 (297)
Q Consensus 58 p~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sprP~sm~ieks~d~G~tW~p~ 129 (297)
++++++|.+ ..|+|.+... . .--++|||++.+.|..|.|++....+..+.|+-| ++|.+|+.+
T Consensus 42 ~a~~aiDGn-~~T~W~s~~~----~---~p~~~VDLg~~~~V~~v~i~~~r~~v~~y~I~~S-~DG~~W~~~ 104 (149)
T 4a42_A 42 EANNLRDGN-ENTLWVPGQE----E---EKSVTFDLSKEKDISAIDIVSKGNSPLKYSIEIS-NDGTEWTKI 104 (149)
T ss_dssp GGGGGGSSC-TTSCBCCCSC----S---SEEEEEEEEEEEECCEEEEEECSSSCCCEEEEEE-SSSSSCEEE
T ss_pred ChHhcEeCC-CCCEEEcCCC----C---CCeEEEECCCcEEEEEEEEEcCCCCcEEEEEEEE-cCCCeEeEe
Confidence 567889974 6889987632 1 1245999999999999999886666888999886 568999875
No 12
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A
Probab=97.55 E-value=0.00015 Score=76.08 Aligned_cols=84 Identities=12% Similarity=0.225 Sum_probs=65.7
Q ss_pred CCccccccCCeeEEeccccCCCCCCCCCcceeecCCccCCcccccccCCCCCCceeccCCCCceeEeccccCCCCCCCCe
Q psy15469 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQ 86 (297)
Q Consensus 7 P~~~n~a~~~~~~a~sTCG~~~~~~~~e~yC~~~~~~~~~~~C~~Cd~~~Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~ 86 (297)
+.-.|||.|++++|||+-+. |++++++|.+ ..|+|.|. .. .
T Consensus 22 ~~~~NLA~gk~vTASS~~~g------------------------------~~p~nAvDGn-~~T~WsS~--~~------~ 62 (914)
T 4a4a_A 22 ASGVEITEGVTVTAKGNTEG------------------------------NTADLAIDGD-LSTYWESS--ND------Y 62 (914)
T ss_dssp --CCBCCSSCEEEESCCCTT------------------------------CCGGGGSSSC-TTCCEECC--SS------C
T ss_pred CccccccCCCceEEeccCCC------------------------------CcHHHeECCC-CCCeEecC--CC------C
Confidence 34579999999999887532 5788899964 68999998 11 3
Q ss_pred eeEEEecCceEEEEEEEEEEeCCCCCcEEEEEecCCCCCCeech
Q psy15469 87 VNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 87 V~itLdL~~~f~v~~v~l~F~sprP~sm~ieks~d~G~tW~p~q 130 (297)
..|+|||++.+.|+.|.|+-...+..+..|+-| ++|++|+++.
T Consensus 63 qWLqVDLG~~~~V~~V~l~~~~~~v~~Y~Ie~S-~DG~~Wt~v~ 105 (914)
T 4a4a_A 63 KWIEVDLGGIYELSKIEIFNKDEAVYKYNIYAS-EDGENFNKIA 105 (914)
T ss_dssp CEEEEEEEEEEEEEEEEEECSSSSCEEEEEEEE-SSSSCCEEEE
T ss_pred ceEEEECCCeEEEEEEEEEecCCceEEEEEEEE-cCCCCeEEEE
Confidence 589999999999999999754455678889876 5699999875
No 13
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=97.49 E-value=1.4e-05 Score=76.41 Aligned_cols=51 Identities=27% Similarity=0.634 Sum_probs=39.8
Q ss_pred eecccccCCCCCCCCCCcccC--CCCcceEe-cCCCCCCCCCCCcCCccCCCCC
Q psy15469 235 SVGARCKCNGHASECPYVRQS--DGSTRRVC-RCEHNTAGPDCNECAPFYNDAP 285 (297)
Q Consensus 235 ~v~g~C~CnGHA~~C~~~~~~--~~~~~~~C-~C~HnT~G~~Ce~C~p~y~~~P 285 (297)
..+..|.||+|+..|.++... .....|+| .|++||+|.+|++|+++|++.+
T Consensus 306 ~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n~~G~~Ce~C~~Gyyg~~ 359 (375)
T 4aqt_A 306 SECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLG 359 (375)
T ss_dssp CCCCCCCGGGSCSCEEECHHHHHHSSCCEEECSCTTTEESTTSCEECSSEECCT
T ss_pred CCCCCCcCcCCCCCcccccccCccCCCCCCCCCCCCCCcCCCCCCCCcCcccCc
Confidence 346679999999998653211 12346899 5999999999999999999865
No 14
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=97.48 E-value=0.00047 Score=57.05 Aligned_cols=70 Identities=14% Similarity=0.203 Sum_probs=54.1
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe----CCCCCcEEEEEecCCCCCCeech
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW----SPRPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~----sprP~sm~ieks~d~G~tW~p~q 130 (297)
+++++|+|.+ ..|+|.|.... ........|+|||++.+.|..|.+... ..+|..+.|+-| ++|.+|+.+.
T Consensus 28 g~~~~a~DG~-~~T~W~s~~~~--~~~~~p~~i~vDLg~~~~i~~v~~~~~~~~~~~~~~~~~I~~S-~Dg~~W~~v~ 101 (159)
T 3f2z_A 28 GHAKHLIDGN-IETFWHSRWQG--GSDPLPYEIIIDMNHRVKIAQIELLPRGRGSNNPIKVVRFEAS-EDGTNWESIG 101 (159)
T ss_dssp BSGGGGSSSC-TTCCEECCCTT--CCCCSCEEEEEEEEEEEEEEEEEEEECCTTCCCCCCEEEEEEE-SSSSSCEEEE
T ss_pred CcHHhcCCCC-CCCeEEcCCcC--CCCCCCEEEEEECCCceEEEEEEEEecCCCCCCCeeEEEEEEE-cCCCCeEEeE
Confidence 6899999975 58999986321 111235789999999999999999884 358999999886 5689999853
No 15
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=97.44 E-value=0.00029 Score=57.86 Aligned_cols=64 Identities=17% Similarity=0.270 Sum_probs=52.2
Q ss_pred CCCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCCCCCcEEEEEecCC-CCCCeec
Q psy15469 56 THPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYE-NSSWTPF 129 (297)
Q Consensus 56 ~Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sprP~sm~ieks~d~-G~tW~p~ 129 (297)
.||+++|.|.+ +.|+|.|.-+ . .-.|+|+|++...|..|.|++. ++....||.|.|. .+.|+.+
T Consensus 26 ~~~~~~~iDg~-~~T~W~s~g~----~---pq~i~I~~~~~~~is~~~i~~~--~~k~~~ie~s~~~~p~~w~~i 90 (139)
T 2yc2_A 26 RFPPENMLDGK-DNTFWVTTGM----F---PQEFVLRLESCIRVSKITTLSL--NVRKLAVEKCDQDKPDQFEKV 90 (139)
T ss_dssp TSCGGGGGSSC-TTCCEECCSS----S---CEEEEEEEEEEEEEEEEEEEEE--SEEEEEEEEECSSSCCCCEEE
T ss_pred CCChhheECCC-CCCEEeCCCC----C---CeEEEEECCCceEEEEEEEEec--CCcEEEEEEecCCCCCceEEE
Confidence 48999999975 7999999522 1 3589999999999999999986 5889999998653 2789885
No 16
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A
Probab=97.43 E-value=0.00032 Score=56.50 Aligned_cols=63 Identities=17% Similarity=0.415 Sum_probs=51.8
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeC--CCCCcEEEEEecCCCCCCeech
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS--PRPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~s--prP~sm~ieks~d~G~tW~p~q 130 (297)
|.+.+++|.+ ..|+|.+.. + ..|+|||++.+.|..|.|++.. .+|..+.|+-| ++|.+|+++.
T Consensus 24 ~~~~~a~Dg~-~~t~W~~~~--------~-~~l~vDLg~~~~v~~v~i~~~~~~~~~~~~~i~~S-~Dg~~w~~~~ 88 (145)
T 2jda_A 24 HVPANIADGD-VKTRWAASG--------E-SWVQLELDKEQSIENILIVPFKPTERKLKFSIFYS-NDGKNWQPLA 88 (145)
T ss_dssp BCGGGGGSSC-TTCCEEEES--------S-EEEEEEEEEEEEEEEEEEEESSTTTCCEEEEEEEE-SSSSSCEEEE
T ss_pred CCchhcccCC-CCCeECCCC--------C-eeEEEECCCceEEEEEEEEeccCCCceEEEEEEEe-CCCCceEEee
Confidence 6788999974 578999872 1 5899999999999999999953 48999999886 5688998864
No 17
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=97.43 E-value=0.00028 Score=58.96 Aligned_cols=68 Identities=12% Similarity=0.215 Sum_probs=53.2
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe----CCCCCcEEEEEecCCCCCCeec
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW----SPRPESFAIYKKTYENSSWTPF 129 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~----sprP~sm~ieks~d~G~tW~p~ 129 (297)
+++++++|.+ ..|+|.|.-...+ . ....|+|||++.+.|..|.++.. ..+|..+.|+-| ++|.+|+.+
T Consensus 45 ~~~~~a~DG~-~~T~W~s~~~~~~-~--~p~~i~iDLg~~~~I~~v~~~~r~~~~~~~~~~y~I~~S-~DG~~W~~v 116 (161)
T 4a41_A 45 GLAKFAIDGK-ENTIWHTKYNPVE-E--LPQSITLELGGSYEINKFTYLPRSGAKNGNITKYELHVS-EDGNNFRKI 116 (161)
T ss_dssp CCGGGGGSSC-TTCCEECCTTTTC-C--SCEEEEEEEEEEEEEEEEEEECCSSCCTTCEEEEEEEEE-SSSSCEEEE
T ss_pred CcHHHcCcCC-CCCeEEeCCCCCC-C--CCEEEEEEcCCCEEEeEEEEEecCCCCCCcEEEEEEEEE-CCCCceEEe
Confidence 7899999975 5899998632111 1 35799999999999999999874 247888999886 568999985
No 18
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.37 E-value=3.2e-05 Score=65.30 Aligned_cols=45 Identities=36% Similarity=0.770 Sum_probs=35.9
Q ss_pred ccCCCCCCCCCCcccCCCCcceEe-cCCCCCCCCCCCcCCccCCCCCCCC
Q psy15469 240 CKCNGHASECPYVRQSDGSTRRVC-RCEHNTAGPDCNECAPFYNDAPWRR 288 (297)
Q Consensus 240 C~CnGHA~~C~~~~~~~~~~~~~C-~C~HnT~G~~Ce~C~p~y~~~Pw~~ 288 (297)
|.|++| ..|.... ..+.++| .|+|+|+|++||+|+++|+++|+.+
T Consensus 1 C~C~~~-g~C~~~~---~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~ 46 (162)
T 1klo_A 1 CPCPGG-SSCAIVP---KTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGS 46 (162)
T ss_dssp CCSCTT-CCEEECS---SSCCEEECSCCTTEESTTSCEECTTEEEETTCT
T ss_pred CcCcCc-CcccccC---CCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccc
Confidence 667766 4676432 2356899 7999999999999999999999875
No 19
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron}
Probab=97.29 E-value=0.00046 Score=58.88 Aligned_cols=69 Identities=13% Similarity=0.129 Sum_probs=52.8
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe--------CCCCCcEEEEEecCCCCCCee
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW--------SPRPESFAIYKKTYENSSWTP 128 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~--------sprP~sm~ieks~d~G~tW~p 128 (297)
||+++|+|.+ +.|+|.|. +..+... +-.|||||++...|..+.+... ...|..+-|+-|.| |.+|+.
T Consensus 39 ~~~~~liDgn-~~T~Wht~-w~~~~~~--P~~itIDLg~~~~v~~~~~~~r~~~~~~~~~g~ik~~~I~~S~D-g~~W~~ 113 (172)
T 3hnm_A 39 WGVESLIDNN-PGTQWLCR-WDVKEPL--PYYFVFDMGKEYTLFRFGFANPVAPAAHVWAGTSKAGYVEASID-NENWVK 113 (172)
T ss_dssp CSGGGGSSSC-TTSCEECC-CSSCCCS--CEEEEEEEEEEEEEEEEEEECCCSSCTTSTTCCEEEEEEEEESS-SSCEEE
T ss_pred ccHHHcCCCC-CCCeEEec-CCCCCCC--CEEEEEECCCceEEeEEEEEecCCCCcccCCCCeEEEEEEEEeC-CCCeEE
Confidence 6899999974 58999883 1112223 4689999999999999999884 24788899999876 678986
Q ss_pred ch
Q psy15469 129 FQ 130 (297)
Q Consensus 129 ~q 130 (297)
..
T Consensus 114 v~ 115 (172)
T 3hnm_A 114 LK 115 (172)
T ss_dssp EE
T ss_pred eE
Confidence 54
No 20
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron}
Probab=97.23 E-value=0.0012 Score=55.32 Aligned_cols=70 Identities=21% Similarity=0.338 Sum_probs=53.5
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe----CCCCCcEEEEEecCCCCCCeech
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW----SPRPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~----sprP~sm~ieks~d~G~tW~p~q 130 (297)
.++++|+|.+ ..|+|.|.-. +...+....|+|||++.+.|..|.+... ..+|..+.|+-| ++|.+|+.+.
T Consensus 38 g~~~~a~DG~-~~T~W~s~~~--~~~~~~p~wi~vDLg~~~~i~~v~~~~r~~~~~~~~~~y~I~~S-~Dg~~W~~v~ 111 (169)
T 3ggl_A 38 GLAKCLIDGD-TETFWHAKWQ--GGSDPLPYDIVIDMKQNIQIAQVELLPRGRGSNNPIKVVEFAAS-EDNVNWTPIG 111 (169)
T ss_dssp BSGGGGGSSC-SSCCEECCCS--SCCCCSCEEEEEEEEEEEEEEEEEEEECCTTCCCCCCEEEEEEE-SSSSCCEEEE
T ss_pred CcHHhcCCCC-CCCceEccCc--CCCCCCCEEEEEECCCcEEEeEEEEEecCCCCCCCeeEEEEEEe-CCCCCcEEeE
Confidence 4789999975 5889988632 1111135789999999999999999874 358999999886 5689999853
No 21
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=97.22 E-value=0.0007 Score=56.73 Aligned_cols=63 Identities=19% Similarity=0.384 Sum_probs=51.2
Q ss_pred CCCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCCCCCcEEEEEecCCCC--CCeec
Q psy15469 56 THPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENS--SWTPF 129 (297)
Q Consensus 56 ~Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sprP~sm~ieks~d~G~--tW~p~ 129 (297)
.|++++|.|.+ ++|+|.|.-+ . .-.|+|||++...|.-|.|+|. ++..+.||.|. +|+ .|+..
T Consensus 34 ~~~~~~~iDgn-~~T~W~t~g~-----~--Pq~i~Idf~k~~~is~~~i~~~--~vk~~~ie~s~-d~~p~~w~~i 98 (153)
T 1tvg_A 34 KHPPENIIDGN-PETFWTTTGM-----F--PQEFIICFHKHVRIERLVIQSY--FVQTLKIEKST-SKEPVDFEQW 98 (153)
T ss_dssp TSCGGGGGSSC-TTCCEECCSC-----S--SEEEEEEEEEEEEEEEEEEEEE--SEEEEEEEEEC-SSSSCCCEEE
T ss_pred ccCHHHcCcCC-CCceEECCCC-----C--CcEEEEECCCceEEEEEEEEec--CCEEEEEEEEC-CCCCcceEEe
Confidence 48999999974 7999999521 1 3589999999999999999997 48889999875 465 78775
No 22
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Probab=97.20 E-value=0.00056 Score=54.99 Aligned_cols=68 Identities=15% Similarity=0.324 Sum_probs=51.9
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe----CCCCCcEEEEEecCCCCCCee
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW----SPRPESFAIYKKTYENSSWTP 128 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~----sprP~sm~ieks~d~G~tW~p 128 (297)
+++++++|.+ ..|+|.|.-.... ......|+|||++.+.|..|.|++. ..+|..+.|+-| ++|.+|+.
T Consensus 26 ~~~~~~~DG~-~~t~w~s~~~~~~--~~~~~~l~iDLg~~~~i~~v~~~~~~~~~~~~~~~~~i~~S-~Dg~~w~~ 97 (150)
T 2j1a_A 26 APASFASDGD-MNTFWHSKWSSPA--HEGPHHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVSVS-LDGENFTE 97 (150)
T ss_dssp BCGGGGSSSC-TTCCEECCCSSSC--CCSCCEEEEEEEEEEEEEEEEEECCSSCCTTEEEEEEEEEE-SSSSSEEE
T ss_pred CcHHhcCcCC-CCCcEEccccCCC--CCCCeEEEEECCCCeEEeEEEEeecCCCCCCCEEEEEEEEE-cCCCceEE
Confidence 6889999975 5789988632211 1135789999999999999999874 346788999887 46889986
No 23
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15
Probab=97.02 E-value=0.0022 Score=53.50 Aligned_cols=86 Identities=9% Similarity=-0.037 Sum_probs=57.9
Q ss_pred CCccccccCCeeEEeccccCCCCCCCCCcceeecCCccCCcccccccCCCCCCceeccCCCCceeEeccccCCCCCCCCe
Q psy15469 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQ 86 (297)
Q Consensus 7 P~~~n~a~~~~~~a~sTCG~~~~~~~~e~yC~~~~~~~~~~~C~~Cd~~~Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~ 86 (297)
|...|||+|+++++||+-+. ....| .++++++|.+ ..|+|.|..... .....+
T Consensus 6 ~~~~NlA~gk~a~aSS~~~~-----~~~~~--------------------~~a~~AvDGn-~~t~w~s~sc~~-T~~~~~ 58 (158)
T 1k12_A 6 YTQENVAVRGKATQSAQLRG-----EHAAN--------------------SEASNAIDGN-RDSNFYHGSCTH-SSGQAN 58 (158)
T ss_dssp EEEEEGGGGSEEEESCBCCS-----TTGGG--------------------CCGGGGGSSC-CCCCGGGSCSCC-BCSCSS
T ss_pred CCcccccCCCeeEECcccCC-----CCccc--------------------CCccccCcCC-CCCccccccEec-CCCCCC
Confidence 34579999999999999874 11111 1678899974 578898753221 001123
Q ss_pred eeEEEecCceEEEEEEEEEEe----CCCCCcEEEEEe
Q psy15469 87 VNITLKFGKTFDVTYVRLLFW----SPRPESFAIYKK 119 (297)
Q Consensus 87 V~itLdL~~~f~v~~v~l~F~----sprP~sm~ieks 119 (297)
--|+|||++.|.|..|+|... ..|-..+-|+-+
T Consensus 59 ~W~~VDLg~~~~V~~V~i~~r~d~~~~r~~~~~i~v~ 95 (158)
T 1k12_A 59 PWWRVDLLQVYTITSVTITNRGDCCGERISGAEINIG 95 (158)
T ss_dssp CEEEEEEEEEEEEEEEEEEECSSSCTTTTTTCEEEEE
T ss_pred CEEEEECCCceEEeEEEEEeCCCcCccccCCEEEEEE
Confidence 579999999999999999984 335445555443
No 24
>2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A*
Probab=96.94 E-value=0.0023 Score=53.10 Aligned_cols=87 Identities=11% Similarity=0.028 Sum_probs=59.8
Q ss_pred CcCCCCccccccCCeeEEeccccCCCCCCCCCcceeecCCccCCcccccccCCCCCCceeccCCCCceeEeccccCCCCC
Q psy15469 3 NRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQ 82 (297)
Q Consensus 3 ~~c~P~~~n~a~~~~~~a~sTCG~~~~~~~~e~yC~~~~~~~~~~~C~~Cd~~~Hp~~~~~D~~~~~twWQS~~~~~g~~ 82 (297)
..-.|.-.|||.|+++++||+-+. .+++.++|.+ ..|.|.|..-.. ..
T Consensus 9 ~~~~~~~~NlAlgk~at~SS~~~~------------------------------~~a~~AvDGn-~~t~w~~~sct~-t~ 56 (151)
T 2j1v_A 9 DKFNDGNLNIAYAKPTTQSSVDYN------------------------------GDPNRAVDGN-RNGNFNSGSVTH-TR 56 (151)
T ss_dssp -CEETTEECTTTTCCEEESCCCTT------------------------------CCGGGGGSSC-CCCCGGGTCCCC-CC
T ss_pred CCCCCCCccccCCCCeeECCCCCC------------------------------CCcCccEeCC-CcCccccccccc-CC
Confidence 334566789999999999988652 2567888975 467787643211 01
Q ss_pred CCCeeeEEEecCceEEEEEEEEEEe----CCCCCcEEEEEecC
Q psy15469 83 WPNQVNITLKFGKTFDVTYVRLLFW----SPRPESFAIYKKTY 121 (297)
Q Consensus 83 ~~~~V~itLdL~~~f~v~~v~l~F~----sprP~sm~ieks~d 121 (297)
...+--++|||++.|.|..|+|... ..|-..+-|+-+.+
T Consensus 57 ~~~~~W~~VDLg~~~~V~~V~i~~r~d~~~~r~~~~~I~v~~~ 99 (151)
T 2j1v_A 57 ADNPSWWEVDLKKMDKVGLVKIYNRTDAETQRLSNFDVILYDN 99 (151)
T ss_dssp SCTTCEEEEEEEEEEEEEEEEEEECCSSCGGGSCSEEEEEECT
T ss_pred CCCCCEEEEECCCCeEcCEEEEEcCCCccccccCCEEEEEECC
Confidence 1124589999999999999999985 34556677766543
No 25
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=96.74 E-value=0.00044 Score=58.21 Aligned_cols=46 Identities=28% Similarity=0.651 Sum_probs=37.4
Q ss_pred eecccccCCCCCC-----CCCCcccCCCCcceEe-cCCCCCCCCCCCcCCccCCCCCCC
Q psy15469 235 SVGARCKCNGHAS-----ECPYVRQSDGSTRRVC-RCEHNTAGPDCNECAPFYNDAPWR 287 (297)
Q Consensus 235 ~v~g~C~CnGHA~-----~C~~~~~~~~~~~~~C-~C~HnT~G~~Ce~C~p~y~~~Pw~ 287 (297)
..+..|.|++|++ .|.. ..++| .|+++|+|.+|++|+++|++.+-.
T Consensus 51 ~~C~~C~C~~~~~~~~~~~C~~-------~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~ 102 (162)
T 1klo_A 51 RLCRPCQCNDNIDPNAVGNCNR-------LTGECLKCIYNTAGFYCDRCKEGFFGNPLA 102 (162)
T ss_dssp EEEEECCSTTCBCTTCSCCBCT-------TTCCBCCBCTTEETTTTCEECTTEEECTTC
T ss_pred CCCeeCcCCCCCCcccCCcccC-------CCCcccCCCCCCcCCCcCcCchhhcCCccc
Confidence 4567899999974 4542 36789 599999999999999999988755
No 26
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=96.67 E-value=0.0027 Score=57.81 Aligned_cols=61 Identities=11% Similarity=0.022 Sum_probs=43.4
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe---CCCCCcEEEEEe
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW---SPRPESFAIYKK 119 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~---sprP~sm~ieks 119 (297)
+++++++|.+ ..|+|.+..... ......--|+|||++.+.|..|+|+.. ..|-..+.|+-|
T Consensus 169 ~~a~~AvDG~-~~t~W~~~~c~~-t~~~~~~W~~VDLg~~~~v~~V~i~~~d~~~~~~~~~~i~vs 232 (293)
T 3cqo_A 169 GIAYNAIDGN-QANNWEMASCTH-TKNTMDPWWRMDLSQTHRVFSVKVTNRDSFEKRINGAEIRIG 232 (293)
T ss_dssp CCGGGGGSSC-CCCSGGGTCCCC-CCSEESCEEEEEEEEEEEEEEEEEECCSSSGGGGTTEEEEEE
T ss_pred CCccccccCC-CCCccccCcccc-CCCCCCCEEEEECCCeEEEeEEEEEccCccccccCCeEEEEe
Confidence 4678889974 588898742111 010113579999999999999999997 556777888775
No 27
>2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae}
Probab=96.34 E-value=0.0075 Score=49.83 Aligned_cols=67 Identities=9% Similarity=0.009 Sum_probs=48.7
Q ss_pred ccccccCCeeEEeccccCCCCCCCCCcceeecCCccCCcccccccCCCCCCceeccCCCCceeEeccccCCCCCCCCeee
Q psy15469 9 FENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVN 88 (297)
Q Consensus 9 ~~n~a~~~~~~a~sTCG~~~~~~~~e~yC~~~~~~~~~~~C~~Cd~~~Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~ 88 (297)
..|||+|++..+||+-.. .+++.++|.+ ..|-|.|..-.. .....+--
T Consensus 12 ~~NlAlgk~a~~SS~~~~------------------------------~~a~~AvDG~-~~t~w~~~sct~-T~~~~~~W 59 (148)
T 2j22_A 12 LSNIALTKETRQSSTDYN------------------------------GFSRLAVDGN-KNGDYGHHSVTH-TKEDSPSW 59 (148)
T ss_dssp CEETTTTCEEEESCCCTT------------------------------CCGGGGGSSC-CCCCGGGTCCCC-CCSCTTCE
T ss_pred CccccCCCceeECCCCCC------------------------------CccCccEeCC-CCCcccccceec-cCCCCCCE
Confidence 579999999999988652 2567888975 467787743221 01112457
Q ss_pred EEEecCceEEEEEEEEEEe
Q psy15469 89 ITLKFGKTFDVTYVRLLFW 107 (297)
Q Consensus 89 itLdL~~~f~v~~v~l~F~ 107 (297)
++|||++.|.|..|+|...
T Consensus 60 w~VDLg~~~~V~~V~i~~r 78 (148)
T 2j22_A 60 WEIDLAQTEELEKLIIYNR 78 (148)
T ss_dssp EEEEEEEEEEEEEEEEEEC
T ss_pred EEEECCCCEEeeEEEEEec
Confidence 9999999999999999874
No 28
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=96.29 E-value=0.0051 Score=56.00 Aligned_cols=69 Identities=9% Similarity=0.024 Sum_probs=51.4
Q ss_pred CccccccCCeeEEeccccCCCCCCCCCcceeecCCccCCcccccccCCCCC-CceeccCCCCceeEeccccCCCCCCCCe
Q psy15469 8 PFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHP-VRYLTDLSNTTTWWQSTTMYDGVQWPNQ 86 (297)
Q Consensus 8 ~~~n~a~~~~~~a~sTCG~~~~~~~~e~yC~~~~~~~~~~~C~~Cd~~~Hp-~~~~~D~~~~~twWQS~~~~~g~~~~~~ 86 (297)
.-.|||+|+++.+||+-+. . ++ +++++|.+ ..|+|.|..... .....+
T Consensus 2 ~~~NlA~~k~a~aSS~~~~-~----------------------------~~~a~~AvDG~-~~t~W~s~~c~~-t~~~~~ 50 (293)
T 3cqo_A 2 NYKNVALRGKATQSARYLH-T----------------------------HGAAYNAIDGN-RNSDFEAGSCTH-TVEQTN 50 (293)
T ss_dssp CCEEGGGGSEEEESSBCSS-T----------------------------TCCGGGGGSSC-CCCCGGGSCSCC-BCSBSS
T ss_pred CCcccCCCCceeECcCCCC-C----------------------------CCCcCccccCC-CCCccCCCceec-CCCCCC
Confidence 3479999999999998873 1 24 78899974 588998864221 000123
Q ss_pred eeEEEecCceEEEEEEEEEEe
Q psy15469 87 VNITLKFGKTFDVTYVRLLFW 107 (297)
Q Consensus 87 V~itLdL~~~f~v~~v~l~F~ 107 (297)
--|+|||++.+.|..|+|.+.
T Consensus 51 ~W~~VDLg~~~~v~~V~i~~r 71 (293)
T 3cqo_A 51 PWWRVDLLEPYIVTSITITNR 71 (293)
T ss_dssp CEEEEEEEEEEEEEEEEEECC
T ss_pred CEEEEECCCceEEEEEEEEeC
Confidence 579999999999999999974
No 29
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=95.60 E-value=0.03 Score=55.42 Aligned_cols=71 Identities=15% Similarity=0.319 Sum_probs=53.5
Q ss_pred CCCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe----CCCCCcEEEEEecCCCCCCe-ec
Q psy15469 56 THPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW----SPRPESFAIYKKTYENSSWT-PF 129 (297)
Q Consensus 56 ~Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~----sprP~sm~ieks~d~G~tW~-p~ 129 (297)
.+++++++|.+ ..|+|.|.-.... ..+....|+|||++.+.|..|.|... ..++..+.|+-| ++|.+|+ |+
T Consensus 477 ~~~~~~a~DG~-~~T~w~s~~~~~~-~~~~~~~i~vDLg~~~~i~~v~~~~r~~~~~~~~~~y~i~~S-~Dg~~w~~~v 552 (601)
T 1w8o_A 477 DGRASNVIDGN-PSTFWHTEWSRAD-APGYPHRISLDLGGTHTISGLQYTRRQNSANEQVADYEIYTS-LNGTTWDGPV 552 (601)
T ss_dssp CCCGGGGGSSC-TTCCEECCCSSTT-CCCSCEEEEEEEEEEEEEEEEEEEECSSCSTTCBCEEEEEEE-SSSSSCEEEE
T ss_pred CCccceeeCCC-CCCcEecCCCCCC-CCCCCeEEEEECCCcEEEeEEEEecCCCCCCCceEEEEEEEE-CCCCccceee
Confidence 37899999975 5899988632110 01125789999999999999999873 248899999887 5688998 45
No 30
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens}
Probab=95.24 E-value=0.037 Score=43.79 Aligned_cols=64 Identities=13% Similarity=0.119 Sum_probs=47.6
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe----CCCCCcEEEEEecCCCCC
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW----SPRPESFAIYKKTYENSS 125 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~----sprP~sm~ieks~d~G~t 125 (297)
+|+..++|.+ ..|+|.+.-.. ... ....|+|||++.+.|+.|.++.. ..++..+.|+-|.| |.+
T Consensus 27 ~~~~~~~Dg~-~~t~w~~~w~~-~~~--~~~~l~vDLg~~~~i~~v~~~~~~~~~~~~~~~~~i~~S~D-g~~ 94 (143)
T 2v72_A 27 DPASSAIDGN-INTMWHTKWNG-SDA--LPQSLSVNLGKARKVSSIAITPRTSGNNGFITKYEIHAINN-GVE 94 (143)
T ss_dssp BCGGGGSSSC-TTCCEECCTTS-CSC--SCEEEEEEEEEEEEEEEEEEECCSSCCTTCEEEEEEEEEET-TEE
T ss_pred ChHHhccCCC-CCCceecCCCC-CCC--CCEEEEEECCCCeEEeEEEEEecccCCCCCEEEEEEEEEcC-CCc
Confidence 7889999975 47899876321 111 35789999999999999999984 34677888888754 543
No 31
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=94.75 E-value=0.038 Score=54.20 Aligned_cols=66 Identities=14% Similarity=0.130 Sum_probs=52.4
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe---CCCCCcEEEEEecCCCCCCeech
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW---SPRPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~---sprP~sm~ieks~d~G~tW~p~q 130 (297)
+.+.+++|.+ ..|||.++... ....|+|||++...|..|+|+.. +-|=.++.||-|. +|.+|+++.
T Consensus 368 ~~~~~a~Dgn-~~TyW~a~~~~------~~~~l~idLg~~~~~n~v~IqE~i~~gqRV~~y~Ve~~~-dgg~W~~va 436 (478)
T 3ues_A 368 AAAAHLVDGN-RDTFWRPDADD------AAPAITLTLPQPTTINAIVIEEAIEHGQRIEHLRVTGAL-PDGTERVLG 436 (478)
T ss_dssp GGGGGGSSSC-TTCCBCCCTTC------SSCEEEEEEEEEEEEEEEEEEECGGGCCCEEEEEEEEEC-TTSCEEEEE
T ss_pred cChhhcccCC-CCceEeCCCCC------CCeeEEEECCCCcEEEEEEEeecccCCCceEEEEEEEEe-CCCCEEEEE
Confidence 5778899964 69999998532 13589999999999999999974 6677889998864 467898754
No 32
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=94.54 E-value=0.045 Score=56.44 Aligned_cols=70 Identities=14% Similarity=0.323 Sum_probs=51.5
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeC----CCCCcEEEEEecCCCCCCeech
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS----PRPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~s----prP~sm~ieks~d~G~tW~p~q 130 (297)
+|+++++|.+ ..|+|.|.-...... ....|+|||++.+.|+.|.++... .++..+.|+-| ++|.+|+++.
T Consensus 613 ~~a~~aiDGn-~~T~W~S~w~~~~~~--~p~wl~VDLg~~~~V~~V~i~~r~~~~~g~v~~y~I~~S-~DG~~W~~v~ 686 (737)
T 2v5d_A 613 APASFASDGD-MNTFWHSKWSSPAHE--GPHHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVSVS-LDGENFTEVK 686 (737)
T ss_dssp BCGGGGGSSC-SSCCEECCCSSSCCC--CCCEEEEEEEEEEEEEEEEEECCSSCCTTEEEEEEEEEE-SSSSCCCCSE
T ss_pred CCHHHccCCC-CCCceeccccCCCCC--CCeEEEEECCCcEEEEEEEEEeccCCCCCceEEEEEEEE-cCCCceEEEE
Confidence 7999999974 689998863211111 246899999999999999999642 24567888886 5688998753
No 33
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.40 E-value=0.063 Score=53.62 Aligned_cols=70 Identities=16% Similarity=0.262 Sum_probs=52.4
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe-----CCCCCcEEEEEecCCCCCC-eec
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-----SPRPESFAIYKKTYENSSW-TPF 129 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~-----sprP~sm~ieks~d~G~tW-~p~ 129 (297)
+++++++|.+ ..|+|.|.....+.+ +....|+|||++.+.|..|.++.. ..++....|+-| ++|++| +..
T Consensus 42 ~~~~~~~Dg~-~~T~W~s~~~~~~~~-~~~~~l~vDLg~~~~i~~v~~~~~~~~~~~~~~~~y~i~~S-~Dg~~w~~~v 117 (656)
T 1k3i_A 42 NECNKAIDGN-KDTFWHTFYGANGDP-KPPHTYTIDMKTTQNVNGLSMLPRQDGNQNGWIGRHEVYLS-SDGTNWGSPV 117 (656)
T ss_dssp SCGGGGSSSC-TTCCEECCCGGGCCC-CSCEEEEEEEEEEEEEEEEEEECCCSSCCTTCBCEEEEEEE-SSSSCCCSCS
T ss_pred CcHHhcCCCC-CCCEEEeCCCCCCCC-CCCceEEecCCCcEEEEEEEEEecccCCCCCCeeEEEEEEE-CCCCCcceee
Confidence 7899999975 588898874311001 124789999999999999999984 237889999887 458899 643
No 34
>3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A
Probab=94.36 E-value=0.046 Score=45.18 Aligned_cols=67 Identities=13% Similarity=0.141 Sum_probs=45.9
Q ss_pred CCCceec-cCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCC-----CCCcEEEEEecCCCCCCeech
Q psy15469 57 HPVRYLT-DLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSP-----RPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 57 Hp~~~~~-D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sp-----rP~sm~ieks~d~G~tW~p~q 130 (297)
|+|.+.. |..+..+.|.+..... .--|+|||++...|+-|+++.... ...+..|+-| ++|.+|++|.
T Consensus 33 ~~p~~arL~~~~~~~~W~~~~~~~------~qwlqVDLg~~~~vt~v~tqg~~~~~~~~~v~~y~i~~S-~Dg~~W~~~~ 105 (158)
T 3bn6_A 33 WFPYYARLDNQGKFNAWTAQTNSA------SEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAYG-DDGVTWTEYK 105 (158)
T ss_dssp CCGGGCBTTCCSSSCSEECSSCCT------TCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEEE-SSSSSCEECC
T ss_pred cChhheEEcCCCCCCcccCCCCCC------CCEEEEeCCCceEEEEEEeeCCCCCCCCceEEEEEEEEE-CCCCceEEEE
Confidence 5566554 3222478898875321 247999999999999999986421 3345667665 5689999875
No 35
>2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase; HET: MSE BTB; 1.45A {Clostridium perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A*
Probab=93.19 E-value=0.25 Score=42.30 Aligned_cols=65 Identities=25% Similarity=0.290 Sum_probs=44.9
Q ss_pred ceeccCCCCceeEecc----ccCCCCCCCCeeeEEEecCceEEEEEE-EEEEe-----CCCCCcEEEEEecCCCCCCeec
Q psy15469 60 RYLTDLSNTTTWWQST----TMYDGVQWPNQVNITLKFGKTFDVTYV-RLLFW-----SPRPESFAIYKKTYENSSWTPF 129 (297)
Q Consensus 60 ~~~~D~~~~~twWQS~----~~~~g~~~~~~V~itLdL~~~f~v~~v-~l~F~-----sprP~sm~ieks~d~G~tW~p~ 129 (297)
..|+|.+.....|.+. .... .--|+|||++...|+-| +++.. .....+..|+-| ++|.+|++|
T Consensus 41 arL~dg~~~t~aW~a~~~~~~~~~------~qwLQVDLg~~~~VtgV~~tQG~~~~~~~~~vt~Y~l~yS-~DG~~W~~~ 113 (192)
T 2w1s_A 41 ANLLDGDDNTGVWYKTLNGDTSLA------GEFIGLDLGKEIKLDGIRFVIGKNGGGSSDKWNKFKLEYS-LDNESWTTI 113 (192)
T ss_dssp GGGSSSCTTCCEEEECHHHHCBCT------TCEEEEEEEEEEEEEEEEEEECCSSTTTTCCCSEEEEEEE-SSSSSCEEE
T ss_pred HheeCCCCCcCEEeCCcccccCCC------CceEEEECCCeEEEEEEEEEcCCCCCCCCCeEEEEEEEEE-cCCCCeEEE
Confidence 4567754224488762 2211 34899999999999999 77663 245677888776 568999987
Q ss_pred hh
Q psy15469 130 QF 131 (297)
Q Consensus 130 qy 131 (297)
.-
T Consensus 114 ~~ 115 (192)
T 2w1s_A 114 KE 115 (192)
T ss_dssp EE
T ss_pred ec
Confidence 63
No 36
>1jhj_A APC10; beta sandwich, jellyroll, cell cycle; 1.60A {Homo sapiens} SCOP: b.18.1.9
Probab=93.09 E-value=0.11 Score=44.08 Aligned_cols=64 Identities=23% Similarity=0.306 Sum_probs=47.4
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe-----CCCCCcEEEEEecCCCCCCeec
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-----SPRPESFAIYKKTYENSSWTPF 129 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~-----sprP~sm~ieks~d~G~tW~p~ 129 (297)
+.+..|.|. +.+|+|||. |.+ | =.|+|.+.+...|..|.|.+. |..|..+.|.- -+....|+.+
T Consensus 39 ~gv~~L~D~-~~~TyWqSd----g~q-p--H~I~i~f~k~v~i~~l~i~vd~~~DeSYtPs~I~v~a-G~~~~dL~ei 107 (171)
T 1jhj_A 39 FGVDQLRDD-NLETYWQSD----GSQ-P--HLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRV-GNNFHNLQEI 107 (171)
T ss_dssp BSTHHHHSS-CTTCCEECC----SSS-S--EEEEEEEEEEEEECEEEEEEEHHHHGGGSEEEEEEEE-ESSTTSCEEE
T ss_pred CChHHcCCC-CCCeeEccC----CCC-C--eEEEEEECCCceEEEEEEEECCCCCCCCCcEEEEEEE-eCCcccceeE
Confidence 368889995 469999997 333 3 477788889999998888773 88999988844 4444566655
No 37
>1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A
Probab=92.59 E-value=0.13 Score=42.58 Aligned_cols=67 Identities=12% Similarity=0.125 Sum_probs=44.1
Q ss_pred CCCceecc-CCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeC-----CCCCcEEEEEecCCCCCCeech
Q psy15469 57 HPVRYLTD-LSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-----PRPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 57 Hp~~~~~D-~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~s-----prP~sm~ieks~d~G~tW~p~q 130 (297)
|+|.+.-. ..+..+.|.+..... .--|+|||++...|+-|+++... ....+..|+-| ++|.+|++|.
T Consensus 32 ~~p~~aRL~~~~~~~~W~a~~~~~------~qwLqVDLg~~~~Vt~v~tqG~~~~~~~~~v~~y~l~yS-~Dg~~W~~~~ 104 (160)
T 1czt_A 32 WEPFRARLNAQGRVNAWQAKANNN------KQWLEIDLLKIKKITAIITQGCKSLSSEMYVKSYTIHYS-EQGVEWKPYR 104 (160)
T ss_dssp CCGGGCBTTCCSSSCSEECSSCST------TCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEEE-SSSSSCEECC
T ss_pred cCcccceecCCCCCCcccCCCCCC------CcEEEEeCCCcEEEEEEEEeCcCCCCcccEEEEEEEEEE-CCCCcEEEEE
Confidence 45544422 122356787764321 24799999999999999999842 13345667665 6789999874
No 38
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=91.50 E-value=0.039 Score=54.33 Aligned_cols=53 Identities=38% Similarity=0.910 Sum_probs=39.8
Q ss_pred cccccCCCCCCCCCCcccC----CCCcceEe-cCCCCCCCCCCCcCCccCCCCCCCCC
Q psy15469 237 GARCKCNGHASECPYVRQS----DGSTRRVC-RCEHNTAGPDCNECAPFYNDAPWRRA 289 (297)
Q Consensus 237 ~g~C~CnGHA~~C~~~~~~----~~~~~~~C-~C~HnT~G~~Ce~C~p~y~~~Pw~~a 289 (297)
...|.|++|+..|.+.... .....++| .|.+++.|.+|+.|.++|+..+-...
T Consensus 315 ~~~C~C~~~~~~C~~d~~~c~~~~~~~gg~C~~C~~g~~G~~Ce~C~~g~~~~~~~~~ 372 (525)
T 4aqs_A 315 CKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDI 372 (525)
T ss_dssp CCCCCCTTSCSEEEECHHHHHHTTSSCCEEEESCCTTEESTTSCEECTTEEECSSSCT
T ss_pred ccccccCCCCCCCCCCcccccccCccCCCcccCCCCCCCCCCcccccCcccccCCCCC
Confidence 4468999999999754211 22345677 79999999999999999988765543
No 39
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=91.11 E-value=0.57 Score=42.89 Aligned_cols=69 Identities=10% Similarity=0.041 Sum_probs=47.1
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeC-----CCCCcEEEEEecCCCCCCeech
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-----PRPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~s-----prP~sm~ieks~d~G~tW~p~q 130 (297)
|.+.+..|.+ ..+.|.+.+..... ..--|+|||++...|+-|+++... ....+..|+-| ++|.+|++|.
T Consensus 189 ~~p~~arl~~-~~~~W~~~~a~~~~---~~qwLqVDLg~~~~Vt~V~tqg~~~~~~~~~v~~Y~l~~S-~dg~~W~~~~ 262 (318)
T 2qqi_A 189 WMPENIRLVT-SRSGWALPPAPHSY---INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYS-NNGSDWKMIM 262 (318)
T ss_dssp CCGGGGBTTC-CCCSCSBCCCTTCC---SCCCEEEEEEEEEEEEEEEEEECCCTTCCCCCCCEEEEEE-SSSSSCEECB
T ss_pred cCchhhhhcc-cCCceeCcccccCC---cCcEEEEeCCCceEEEEEEEcCccCCCCCeEEEEEEEEEE-CCCCCEEEEE
Confidence 5666666643 35678754211110 134799999999999999999842 34567888776 5689999865
No 40
>1gqp_A DOC1/APC10; cell cycle, APC10/DOC1, APC/cyclosome, ubiquitination, E3 ubiquitin ligase, beta sandwich, jelly roll; 2.2A {Saccharomyces cerevisiae} SCOP: b.18.1.9
Probab=90.04 E-value=0.43 Score=42.08 Aligned_cols=54 Identities=33% Similarity=0.637 Sum_probs=37.9
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEE-----eCCCCCcEEEEE
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLF-----WSPRPESFAIYK 118 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F-----~sprP~sm~iek 118 (297)
+.+..|.|. +.+|+|||. |.| |. .|||.+.+...|..|.|-. .|..|..+.|.-
T Consensus 70 ~gV~~L~D~-s~~TyWQSD----G~q-PH--~ItI~f~k~v~I~~L~iyvD~~~DeSYtPs~I~V~a 128 (221)
T 1gqp_A 70 NPVDFALDD-NYDTFWQSD----GGQ-PH--QLDIMFSKRMDICVMAIFFSMIADESYAPSLVKVYA 128 (221)
T ss_dssp CCGGGGSSS-CTTCCEECC----SSS-SE--EEEEEEEEEEEECEEEEEEEHHHHGGGSEEEEEEEE
T ss_pred CCHHHhcCC-CccceeccC----CCC-Ce--EEEEEEcCCceEEEEEEEECCCCCCCCCCEEEEEEE
Confidence 367778885 469999994 444 43 5566667777777666655 388999998843
No 41
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=89.24 E-value=0.071 Score=57.82 Aligned_cols=70 Identities=13% Similarity=0.162 Sum_probs=0.0
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCe-eeEEEecCceEEEEEEEEEEeC------CCCCcEEEEEecCCCCCCeec
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQ-VNITLKFGKTFDVTYVRLLFWS------PRPESFAIYKKTYENSSWTPF 129 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~-V~itLdL~~~f~v~~v~l~F~s------prP~sm~ieks~d~G~tW~p~ 129 (297)
+++++++|.+ ..|+|.|.-. .. ..+.. ..|+|||++...|+.|.++-.. ..+...-|+=|.++|.+|+++
T Consensus 1244 g~A~nAIDGD-~~T~WHSaWs-~s-s~~~PgqWLqVDLGe~~tIsgf~YqpRqdg~~~NG~VksYkIeVS~dDG~nWttV 1320 (1376)
T 2zxq_A 1244 GPADLAQDGN-DSTHWHTSWS-EN-AVGNGTAWYQFNLNEPTTINGLRYLPRSGGMNANGKIKGYKITLTLADGTTKDVV 1320 (1376)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHcCcCC-CCCeEEeccc-cc-CCCCCceEEEEEcCCcEEEEEEEEecCccCCCCCCceEEEEEEEECCCCCeEEEE
Confidence 6889999974 6899988621 11 11112 5799999999999988876532 256678888887789999876
No 42
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=88.71 E-value=0.15 Score=52.43 Aligned_cols=67 Identities=3% Similarity=0.020 Sum_probs=29.9
Q ss_pred CCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCC-CCCcEEEEEecCCCCCCeec
Q psy15469 58 PVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSP-RPESFAIYKKTYENSSWTPF 129 (297)
Q Consensus 58 p~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sp-rP~sm~ieks~d~G~tW~p~ 129 (297)
++.+++|.+ ..|||.|..... .. ..-.|+|||++...|..|.+.+... ......||-| .+|++|++.
T Consensus 604 ~~~~a~Dgd-~~T~w~s~~~~~-~~--~g~wi~VdL~~~~~V~~I~i~~~~~~~~~~~~ve~S-~DGk~W~~v 671 (716)
T 2cho_A 604 NLPLQVKAN-RVLISPANEVVK-WA--AGNSVEIELDAIYPGENIQINFGKDAPCTWGRLEIS-TDAKEWKTV 671 (716)
T ss_dssp CCCEEEETT-EEEECC---------------CEEEEEEEEEEEEEEECC------------------------
T ss_pred CchheeCCC-cceEEECCCCcc-CC--CCCEEEEEcCCcEEEEEEEEecCCCCCCceEEEEEE-CCCCCccCC
Confidence 678999974 589999985310 01 1358999999999999999998422 1223556654 568999888
No 43
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A
Probab=88.55 E-value=0.64 Score=39.22 Aligned_cols=58 Identities=9% Similarity=0.115 Sum_probs=40.3
Q ss_pred ceeEeccccCCCCCCCC-eeeEEEecCceEEEEEEEEEEeC------CCCCcEEEEEecCCCCCCeech
Q psy15469 69 TTWWQSTTMYDGVQWPN-QVNITLKFGKTFDVTYVRLLFWS------PRPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 69 ~twWQS~~~~~g~~~~~-~V~itLdL~~~f~v~~v~l~F~s------prP~sm~ieks~d~G~tW~p~q 130 (297)
.+.|.+..... ... .--|+|||++...|+-|+++... .-..+..|+-| ++|.+|++|.
T Consensus 57 ~~aW~a~~~~~---~d~~~qWLQVDLg~~~~VtgV~tQG~~~~~~~~~~vt~Y~l~yS-~Dg~~W~~y~ 121 (178)
T 2wuh_A 57 DGAWCPEIPVE---PDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKINYS-RDGTRWISWR 121 (178)
T ss_dssp TSSBCCSSCBB---TTBCCCCEEEEEEEEEEEEEEEEECCCGGGTCCCCCSEEEEEEE-SSSSSCEECC
T ss_pred CCeecCCcCCC---CCCCCCEEEEecCCceEEeEEEEecccCCCCccceeEEEEEEEE-cCCCcEEEEe
Confidence 56786654210 001 24799999999999999999842 23466778775 5679999876
No 44
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=88.51 E-value=0.5 Score=43.28 Aligned_cols=66 Identities=12% Similarity=0.012 Sum_probs=46.0
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCC-------CCCcEEEEEecCCCCCCeec
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSP-------RPESFAIYKKTYENSSWTPF 129 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sp-------rP~sm~ieks~d~G~tW~p~ 129 (297)
|++.++.+.+ ..+.|.+..... .--|+|||++...|+-|+++.... .-.+..|+-| ++|.+|+.|
T Consensus 33 ~~p~~arl~~-~~~~W~~~~~~~------~qwlqVDLg~~~~v~~v~tqg~~~~~~~~~~~v~~y~i~~S-~Dg~~W~~~ 104 (318)
T 2qqi_A 33 WSAERSRLNY-PENGWTPGEDSY------REWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVS-SNGEDWITI 104 (318)
T ss_dssp GCGGGGBTTC-SSCCBCCSSCCT------TCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEE-SSSSSCEEC
T ss_pred CChhhhhhcC-CCCeEcCCCCCC------CceEEEccCCcEEEEeeeeeccccCCCCccEeEEEEEEEEe-cCCCeEEEE
Confidence 5666666642 367897764321 247999999999999999997422 2344667665 678999987
Q ss_pred h
Q psy15469 130 Q 130 (297)
Q Consensus 130 q 130 (297)
.
T Consensus 105 ~ 105 (318)
T 2qqi_A 105 K 105 (318)
T ss_dssp E
T ss_pred e
Confidence 4
No 45
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=87.87 E-value=0.52 Score=41.29 Aligned_cols=66 Identities=12% Similarity=0.041 Sum_probs=44.2
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCCC-------CCcEEEEEecCCCCCCeec
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPR-------PESFAIYKKTYENSSWTPF 129 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~spr-------P~sm~ieks~d~G~tW~p~ 129 (297)
|.|.+.-+.. ..+.|.+.... ..--|+|||++...|+-|+++-.... -.+..|+-| ++|.+|..|
T Consensus 32 ~~P~~ARLn~-~~~aW~a~~~d------~~qWLQVDLg~~~~VtgV~tQG~~~~~~~~~~~VtsY~l~yS-~DG~~W~~y 103 (218)
T 4deq_A 32 WSAERSRLNY-PENGWTPGEDS------YREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVS-SNGEDWITI 103 (218)
T ss_dssp GCGGGCBTTC-SSCCBCCSSCS------TTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEE-SSSSSCEEC
T ss_pred CChhHeEEcC-CCCeECCCCCC------CCCeEEEeCCCcEEEEEEEEEeccCCCCCccceEEEEEEEEE-eCCCceEEe
Confidence 5666655532 35789776432 13479999999999999999874221 123446555 678999987
Q ss_pred h
Q psy15469 130 Q 130 (297)
Q Consensus 130 q 130 (297)
.
T Consensus 104 ~ 104 (218)
T 4deq_A 104 K 104 (218)
T ss_dssp E
T ss_pred e
Confidence 5
No 46
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=87.48 E-value=0.59 Score=42.89 Aligned_cols=66 Identities=6% Similarity=0.026 Sum_probs=45.5
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCC-------CCCcEEEEEecCCCCCCeec
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSP-------RPESFAIYKKTYENSSWTPF 129 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sp-------rP~sm~ieks~d~G~tW~p~ 129 (297)
|.+.+..+.. ..+.|.+..... .--|+|||++...|+-|+++.... .-.+..|+-| ++|.+|..|
T Consensus 34 ~~p~~arl~~-~~~~W~~~~~~~------~qwlqvDLg~~~~vt~v~tqg~~~~~~~~~~~v~~y~l~~S-~dg~~W~~~ 105 (325)
T 2qqj_A 34 WTPQQSRLHG-DDNGWTPNLDSN------KEYLQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVS-TNGEDWMVY 105 (325)
T ss_dssp SCGGGCBTTC-SSCCBCCSSCST------TCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEE-SSSSSCEEC
T ss_pred cCccceeecC-CCCccccCcCCc------CccEEEeccceEEEEEEEeeCCcCCCCCcceeEEEEEEEEE-cCCcEeEEe
Confidence 5666666632 357787764321 247999999999999999998422 2234667665 668999987
Q ss_pred h
Q psy15469 130 Q 130 (297)
Q Consensus 130 q 130 (297)
.
T Consensus 106 ~ 106 (325)
T 2qqj_A 106 R 106 (325)
T ss_dssp E
T ss_pred e
Confidence 5
No 47
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=86.02 E-value=1.4 Score=42.15 Aligned_cols=69 Identities=10% Similarity=0.044 Sum_probs=45.3
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCC-----CCCcEEEEEecCCCCCCeech
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSP-----RPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sp-----rP~sm~ieks~d~G~tW~p~q 130 (297)
|.+.+..|.+ ..+.|.+.+..... ..--|+|||++...|+-|+++-... .-.+..|+-| ++|.+|++|.
T Consensus 321 ~~p~~arl~~-~~~~W~~~~~~~~~---~~qwLqVDLg~~~~vt~v~tqg~~~~~~~~~v~~Y~i~~S-~dg~~W~~~~ 394 (450)
T 2qqm_A 321 WMPENIRLVT-SRSGWALPPAPHSY---INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYS-NNGSDWKMIM 394 (450)
T ss_dssp CCGGGGBTTT-CSSCEEECCCSSCC---CSCCEEEEEEEEEEEEEEEEECCSCTTTCCCEEEEEEEEE-SSSSSCEECB
T ss_pred cCchhhhccc-cCCcccccccccCC---cCceEEEeCCCcEEEEEEEecCccCCCCcEEEEEEEEEEE-CCCCcEEEEE
Confidence 5666666543 36778754221110 1347999999999999999997432 2235667665 6789999865
No 48
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=85.98 E-value=1.2 Score=39.76 Aligned_cols=55 Identities=11% Similarity=0.172 Sum_probs=39.9
Q ss_pred ceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCC---CCCcEEEEEecCCCCCCeech
Q psy15469 69 TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSP---RPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 69 ~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sp---rP~sm~ieks~d~G~tW~p~q 130 (297)
.+.|.+..... .--|++||++...|+-|.++.... --.+..|+-| ++|.+|++|.
T Consensus 49 ~~~W~a~~~d~------~qwLqVDLg~~~~Vt~V~tQG~~~~~~~vt~Y~l~yS-~Dg~~W~~y~ 106 (257)
T 2vm9_A 49 SESWSSSVLDK------NQFIVAGSDSVKHFVAISTQGRGDHDQWVTSYKLRYT-LDNVNWVEYN 106 (257)
T ss_dssp CSSEECSSCST------TCCEEEEEEEEEEEEEEEEECCSSSSCEEEEEEEEEE-SSSSCEEEGG
T ss_pred CCeeeCCCCCC------CcEEeecCCCcEEEEEEEEeCCccCCceEEEEEEEEE-cCCCcEEEEc
Confidence 47787764321 347999999999999999998532 2345667665 5688999976
No 49
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=81.68 E-value=2.2 Score=42.11 Aligned_cols=69 Identities=12% Similarity=0.113 Sum_probs=45.6
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeC-----------CCCCcEEEEEecCCCCC
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-----------PRPESFAIYKKTYENSS 125 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~s-----------prP~sm~ieks~d~G~t 125 (297)
|.+.+..+. +..+.|.+...... ...--|+|||++...|+-|+++... .--.+..|+-| ++|.+
T Consensus 438 ~~p~~arl~-~~~~~W~~~~~~~~---~~~qwLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v~~Y~l~~S-~dg~~ 512 (579)
T 2qqk_A 438 WSPSAARLV-SSRSGWFPRIPQAQ---PGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYS-LNGKD 512 (579)
T ss_dssp CCGGGGBTT-TCSSCBCCSSTTCC---TTTCCEEEEEEEEEEEEEEEEECBC---------CCBCEEEEEEEEE-SSSSC
T ss_pred cCchhheec-ccCcCCcccccccC---CccceEEEecCCceEEEEEEeCCCCCCCCccccccceeeEEEEEEEE-cCCCc
Confidence 456655553 24678987621111 1134799999999999999999743 12244667665 67899
Q ss_pred Ceech
Q psy15469 126 WTPFQ 130 (297)
Q Consensus 126 W~p~q 130 (297)
|++|.
T Consensus 513 W~~~~ 517 (579)
T 2qqk_A 513 WEYIQ 517 (579)
T ss_dssp CEECB
T ss_pred eeEEE
Confidence 99885
No 50
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=81.33 E-value=2.5 Score=38.60 Aligned_cols=70 Identities=11% Similarity=0.090 Sum_probs=45.1
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeC-----------CCCCcEEEEEecCCCCC
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-----------PRPESFAIYKKTYENSS 125 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~s-----------prP~sm~ieks~d~G~t 125 (297)
|.+.+..+. +..+.|.+...... ...--|+|||++...|+-|+++... .--.+..|+-| ++|.+
T Consensus 190 ~~p~~arL~-~~~~~W~~~~~~~~---~~~qwLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~vt~Y~l~yS-~dg~~ 264 (325)
T 2qqj_A 190 WSPSAARLV-SSRSGWFPRIPQAQ---PGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYS-LNGKD 264 (325)
T ss_dssp CCGGGGBTT-TCSSCBCCSSSSCC---TTTCCEEEEEEEEEEEEEEEEECBCCC----CCCCCBCEEEEEEEEE-SSSSS
T ss_pred cCcchhhhc-cCCCccccccccCC---CccceeEeccCCceeEEEEEecCCCCCCCccccCcceeEEEEEEEEE-eCCCC
Confidence 455555443 23577876521110 1134799999999999999999743 12245677765 56899
Q ss_pred Ceechh
Q psy15469 126 WTPFQF 131 (297)
Q Consensus 126 W~p~qy 131 (297)
|+.|.-
T Consensus 265 W~~~~~ 270 (325)
T 2qqj_A 265 WEYIQD 270 (325)
T ss_dssp CEECEE
T ss_pred eEEEec
Confidence 998763
No 51
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=79.91 E-value=1.6 Score=41.79 Aligned_cols=66 Identities=12% Similarity=0.027 Sum_probs=43.6
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCC-------CCCcEEEEEecCCCCCCeec
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSP-------RPESFAIYKKTYENSSWTPF 129 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sp-------rP~sm~ieks~d~G~tW~p~ 129 (297)
|.+.+..+. .+.+.|.+.... ..--|+|||++...|+-|+++.... .-.+..|+-|.| |.+|..|
T Consensus 165 ~~p~~arl~-~~~~~W~~~~~~------~~qwlqvDLg~~~~vt~v~tqg~~~~~~~~~~~v~~y~l~~S~d-g~~W~~~ 236 (450)
T 2qqm_A 165 WSAERSRLN-YPENGWTPGEDS------YREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSN-GEDWITI 236 (450)
T ss_dssp GCGGGGBTT-CSSCCBCCSSCS------TTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS-SSSEEEC
T ss_pred chhhccccc-cCCCCccCCCCC------CCceEEEcccceEEEEEEeccCCCCCCCCcceeEEEEEEEEeCC-CCceeEE
Confidence 444444443 235678665321 1246999999999999999997432 224466777755 8999987
Q ss_pred h
Q psy15469 130 Q 130 (297)
Q Consensus 130 q 130 (297)
.
T Consensus 237 ~ 237 (450)
T 2qqm_A 237 K 237 (450)
T ss_dssp B
T ss_pred e
Confidence 4
No 52
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=79.25 E-value=3.1 Score=39.81 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=44.6
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeC-----------CCCCcEEEEEecCCCCC
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-----------PRPESFAIYKKTYENSS 125 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~s-----------prP~sm~ieks~d~G~t 125 (297)
|.+.+..+. +..+.|.+....... ..--|+|||++...|+-|+++... .--.+..|+-| ++|.+
T Consensus 319 ~~p~~arl~-~~~~~W~~~~~~~~~---~~qwLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v~~Y~l~yS-~dg~~ 393 (460)
T 2qqo_A 319 WSPSAARLV-SSRSGWFPRIPQAQP---GEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYS-LNGKD 393 (460)
T ss_dssp CCGGGGBTT-TCSSCBCCSSSSCCT---TTCCEEEEEEEEEEEEEEEEECCCCC--CCCGGGCCCEEEEEEEEE-SSSSS
T ss_pred cCcchhhhc-cCCCCcccccccCCC---ccceEEEcCCCceEEEEEEecCCCCCCCccccccceeEEEEEEEEE-eCCCc
Confidence 455554443 235778775211111 134799999999999999999743 12235667765 66899
Q ss_pred Ceech
Q psy15469 126 WTPFQ 130 (297)
Q Consensus 126 W~p~q 130 (297)
|+.|+
T Consensus 394 W~~~~ 398 (460)
T 2qqo_A 394 WEYIQ 398 (460)
T ss_dssp CEECE
T ss_pred eEEEE
Confidence 99975
No 53
>3hny_M Coagulation factor VIII; blood clotting, acute phase, blood coagulation, calcium, DIS mutation, disulfide bond, glycoprotein, hemophilia; 1.07A {Homo sapiens} SCOP: b.18.1.2 PDB: 3hnb_M 3hob_M 1d7p_M 1iqd_C 1cfg_A 1fac_A
Probab=77.33 E-value=1.6 Score=35.84 Aligned_cols=55 Identities=22% Similarity=0.264 Sum_probs=37.6
Q ss_pred ceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeC-C----CCCcEEEEEecCCCCCCeech
Q psy15469 69 TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-P----RPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 69 ~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~s-p----rP~sm~ieks~d~G~tW~p~q 130 (297)
...|.+.... ..--|++||++...|+-|+++-.. . --.+..|+-| ++|.+|..|.
T Consensus 47 ~~aW~a~~~d------~~qwLqVDLg~~~~VtgV~tqG~~~~~~~~~v~~y~l~yS-~Dg~~W~~~~ 106 (159)
T 3hny_M 47 SNAWRPQVNN------PKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSS-QDGHQWTLFF 106 (159)
T ss_dssp SCSBCCSSCS------TTCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEEE-SSSSSCEECE
T ss_pred CCccCCCCCC------CCCeEEcccCCcEEEEEEEeecCCCCCccceEEEEEEEEE-ECCCcEEEEe
Confidence 4678766421 134799999999999999999632 1 1234556554 6689999874
No 54
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=76.21 E-value=2.8 Score=41.98 Aligned_cols=71 Identities=10% Similarity=0.103 Sum_probs=48.2
Q ss_pred CCCceeccCCCC-ceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCC-----CCCcEEEEEecCCCCCCeech
Q psy15469 57 HPVRYLTDLSNT-TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSP-----RPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 57 Hp~~~~~D~~~~-~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sp-----rP~sm~ieks~d~G~tW~p~q 130 (297)
|.+.++.+.+.. .+.|.+....... ...--|+|||++...|+-|+++.... .-.+..|+-| .+|.+|..|+
T Consensus 355 ~~p~~arl~~~~~~~~W~~~~~~~~~--~~~qwlqVDLg~~~~vt~v~tqg~~~~~~~~~v~~y~i~yS-~Dg~~W~~~~ 431 (647)
T 1sdd_B 355 WEPKLARLNNGGSYNAWIAEKLSTEF--NPEPWIQVDMQKEVLLTGIQTQGAKHYLKPYYTTEFCVAYS-LDRKNWRIFK 431 (647)
T ss_dssp CCGGGCBTTCCSSSCSEECSCCCCSS--CCCSCEEEEEEEEEEEEEEEEECEESSSSEEEEEEEEEEEE-SSSSSCEECC
T ss_pred cccceeeecCCCCcccccCCCCcccc--cccceEEeccCCeEEEEEEEEcCCCCCCCccEEEEEEEEEE-cCCCceEEec
Confidence 677777664432 4789887543210 11347999999999999999998431 3345667776 4688999875
No 55
>2yfu_A Carbohydrate binding family 6; sugar binding protein; 1.65A {Clostridium thermocellum} PDB: 2y8j_A* 2y9i_A* 2y9s_A 2yb7_A* 2y8m_A 2yfz_A* 2yg0_A*
Probab=75.53 E-value=4.5 Score=33.43 Aligned_cols=65 Identities=17% Similarity=0.119 Sum_probs=42.9
Q ss_pred CCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceE--EEEEEEEEEeC---CCCCcEEEEEecC-CCCCCeech
Q psy15469 58 PVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTF--DVTYVRLLFWS---PRPESFAIYKKTY-ENSSWTPFQ 130 (297)
Q Consensus 58 p~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f--~v~~v~l~F~s---prP~sm~ieks~d-~G~tW~p~q 130 (297)
....++|.+ ..|+|.++.. ..--|+|||++.. .|+-+...=.. .|+....||-|.| ++++|..+.
T Consensus 24 ~~~~~~DGn-~~T~f~~~~~-------~~~~i~iDLG~~~~~~l~~f~Y~Pr~~~~~~miGg~fegSnd~Df~~~~tL~ 94 (155)
T 2yfu_A 24 TIHKAFDGD-LNTFFDGPTA-------NGCWLGLDFGEGVRNVITQIKFCPRSGYEQRMIGGIFQGANKEDFSDAVTLF 94 (155)
T ss_dssp CGGGGGSSC-TTCCBCCSSS-------SSCEEEEECCTTCCEEEEEEEEECCTTCGGGGTTCEEEEESSTTCTTCEEEE
T ss_pred hhhheecCC-CCcEeEcCCC-------CCceEEEECCCCcceEEeeEEEecCcccccCCcEEEEEEECCCCCCCeEEEE
Confidence 356789974 7999987522 1357999999976 55555444322 2455678888865 568888543
No 56
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A
Probab=62.95 E-value=1.5 Score=46.05 Aligned_cols=84 Identities=18% Similarity=0.215 Sum_probs=0.0
Q ss_pred CCccccccCCeeEEecc--ccCCCCCCCCCcceeecCCccCCcccccccCCCCCCceeccCCCC--ceeEeccccCCCCC
Q psy15469 7 PPFENAAFSASVESTNT--CGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLTDLSNT--TTWWQSTTMYDGVQ 82 (297)
Q Consensus 7 P~~~n~a~~~~~~a~sT--CG~~~~~~~~e~yC~~~~~~~~~~~C~~Cd~~~Hp~~~~~D~~~~--~twWQS~~~~~g~~ 82 (297)
|.-.|||++++++|+|- |-. + -++..|+|+.-. .+=|-|..
T Consensus 797 ~~~~NLAl~k~ataSs~~~~~~-~----------------------------e~p~kaVDG~~~~~stKWcs~~------ 841 (937)
T 3gdb_A 797 PLAENIVPGATVIDSTFPKTEG-G----------------------------EGIEGMLNGTITSLSDKWSSAQ------ 841 (937)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccccccCCCceEEeccccccc-c----------------------------cCHHHhcCCcccCCCCccccCC------
Confidence 56679999999987663 311 0 156677776422 23354442
Q ss_pred CCCeeeEEEecCceEEEEEEEEEEeCCCCC----------cEEEEEecCCCCCCee
Q psy15469 83 WPNQVNITLKFGKTFDVTYVRLLFWSPRPE----------SFAIYKKTYENSSWTP 128 (297)
Q Consensus 83 ~~~~V~itLdL~~~f~v~~v~l~F~sprP~----------sm~ieks~d~G~tW~p 128 (297)
. .-.|+|||++.+.|...+|++.+---+ ..-|+-|.| |.+|+.
T Consensus 842 ~--~~wl~vDLg~~~tI~~~vv~hagaggE~~~~~~~NT~dF~Lq~s~d-~~~W~~ 894 (937)
T 3gdb_A 842 L--SGSVDIRLTKSRTVVRWVMDHAGAGGESVNDGLMNTKDFDLYYKDA-DGEWKL 894 (937)
T ss_dssp --------------------------------------------------------
T ss_pred C--CceEEEECCCcEEEeEEEEEecccCccccccccccccceEEEEecC-CCCeEE
Confidence 1 348999999999999999998633222 255666543 666764
No 57
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=62.86 E-value=1.8 Score=41.73 Aligned_cols=16 Identities=6% Similarity=-0.029 Sum_probs=5.0
Q ss_pred ecccccCCCCCCCCCC
Q psy15469 236 VGARCKCNGHASECPY 251 (297)
Q Consensus 236 v~g~C~CnGHA~~C~~ 251 (297)
.+..|.|++|+..|..
T Consensus 353 ~C~pC~Cn~~g~~CD~ 368 (426)
T 3zyj_B 353 ACIPSISSIGTNVCDN 368 (426)
T ss_dssp CCCCCCC---------
T ss_pred cccCCCCCCCcCcccc
Confidence 4557889999999974
No 58
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=61.01 E-value=7.2 Score=39.02 Aligned_cols=56 Identities=16% Similarity=0.274 Sum_probs=38.9
Q ss_pred CceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCC-----CCCcEEEEEecCCCCCCeech
Q psy15469 68 TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSP-----RPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 68 ~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sp-----rP~sm~ieks~d~G~tW~p~q 130 (297)
..+.|.+.... ..--|++||++...|+-|+++.... --.+..|+-| ++|.+|+.|.
T Consensus 531 ~~~~W~a~~~~------~~qwLqVDLg~~~~vt~v~tqg~~~~~~~~~v~~y~l~~S-~dg~~W~~~~ 591 (647)
T 1sdd_B 531 RVNAWQAKANN------NNQWLQIDLLKIKKITAIVTQGCKSLSSEMYVKSYTIHYS-DQGTDWKPYR 591 (647)
T ss_dssp SSCSEECSSCS------SCCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEECEEEE-SSSSCCEECC
T ss_pred CcccccCCCCC------CCcEEEEeCCCceEEEEEEeecCCCCCCCcceEEEEEEEE-CCCCcEEEEE
Confidence 35678765421 1347999999999999999987421 1234557665 5689999875
No 59
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=59.82 E-value=8.5 Score=39.43 Aligned_cols=131 Identities=18% Similarity=0.302 Sum_probs=0.0
Q ss_pred eeEEEecCceEEEEEEEEEEeCCCCC--cEEEEEecCCCCCCeechhhHhhhhhhcCCCCCCCCCCCCCCCceeeecCCC
Q psy15469 87 VNITLKFGKTFDVTYVRLLFWSPRPE--SFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYS 164 (297)
Q Consensus 87 V~itLdL~~~f~v~~v~l~F~sprP~--sm~ieks~d~G~tW~p~qyfa~~C~~~f~~~~~~~~~~~~~~~~v~Ct~~ys 164 (297)
|+..|++..-.-|.+-.+.=++..-+ .+.||-|.|+|.+|++.+= +| ....+-|.+
T Consensus 422 vT~~l~v~~~~fiQF~l~~gC~~~~~~~~V~leYS~d~G~sW~~l~~---~C----------------~p~~~~C~~--- 479 (725)
T 2e26_A 422 VTTDIAVNEDSFLQIDFAASCSVTDSCYAIELEYSVDLGLSWHPLVR---DC----------------LPTNVECSR--- 479 (725)
T ss_dssp EECCEEECTTCEEEEEEECCTTSCCCCCEEEEEEESSTTSSCEESSC---CB----------------CTTSSSBC----
T ss_pred EEEeEEecCCeEEEEEEecCCCCcCCcceEEEEEecCCCcceeeccc---cc----------------ccCcccccc---
Q ss_pred CCCCCCCCceeEEecCCCCCcCCCCCcHhhHhhhhcce----------eEEEEeecccCcccccCCccccceeeeeeece
Q psy15469 165 DLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATE----------IRITLDRLNTFYDELFLDPSVLRSYFYAIADI 234 (297)
Q Consensus 165 ~~~p~~~g~V~f~~l~~rp~~~~~~~s~~lqd~~tat~----------iRi~l~~~~~~~~~~~~~~~~~~~~yYai~~i 234 (297)
-.......+.....|.++|- .|+|+.+....- -..-|++.|.
T Consensus 480 ------------------~~~~~~~~s~~~~~w~RiT~~lp~~~~s~~trFRw~q~~~~~----------C~~gw~g~dc 531 (725)
T 2e26_A 480 ------------------YHLQRILVSDTFNKWTRITLPLPSYTRSQATRFRWHQPAPFD----------KQQTWAIDNV 531 (725)
T ss_dssp --------------------CCCCEETTTTSSCEEEEEECCGGGCEEEEEEEEEECSSCC----------TTCCEEEEEE
T ss_pred ------------------ccccceeecccCCCceEEEEeCcccccCCcceEEeccccCCc----------cCCCcccccc
Q ss_pred eecccccCC-CCCCCCCCcccCCCCcceEecCCCCCCCCCCCc
Q psy15469 235 SVGARCKCN-GHASECPYVRQSDGSTRRVCRCEHNTAGPDCNE 276 (297)
Q Consensus 235 ~v~g~C~Cn-GHA~~C~~~~~~~~~~~~~C~C~HnT~G~~Ce~ 276 (297)
.++..|... +-.-+|. .++|.|.....|..|+.
T Consensus 532 ~i~~~Cp~~C~ghG~C~---------~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 532 YIGDGCLDMCSGHGRCV---------QGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp EEESCSSGGGGGSEEEE---------TTEEEECTTEESTTSCE
T ss_pred cccCCCCcccCCCcEEC---------CCCEeeCCCccCCCcCc
No 60
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=54.72 E-value=7.5 Score=40.08 Aligned_cols=65 Identities=8% Similarity=0.108 Sum_probs=44.2
Q ss_pred CCCceeccCCC-CceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeC-----CCCCcEEEEEecCCCCCCeech
Q psy15469 57 HPVRYLTDLSN-TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-----PRPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 57 Hp~~~~~D~~~-~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~s-----prP~sm~ieks~d~G~tW~p~q 130 (297)
|.++++.+.+. ..++|.+. + ..--|++||++...|+-|.++... ..-.+..|+-| ++|.+|..|.
T Consensus 484 ~~p~~arL~~~~~~~aW~~~---~-----~~qwLQVDLg~~~~Vt~V~tQG~~~~~~~~~v~sY~I~yS-~DG~~W~~y~ 554 (770)
T 2r7e_B 484 WAPKLARLHYSGSINAWSTK---E-----PFSWIKVDLLAPMIIHGIKTQGARQKFSSLYISQFIIMYS-LDGKKWQTYR 554 (770)
T ss_dssp CCTTCCSSCCSTTCSSEECC---S-----SCCCEEEEEEEEEEECBCCCCCEECSSSEECCSEEEEEEE-SSSSSCBCCC
T ss_pred cchheEEECCCCCccccccC---C-----CCceEEecCCceEEEEEEEEcccCcCCcccceEEEEEEEe-cCCCccEEee
Confidence 56666554332 25788763 1 134799999999999999998632 23456778765 5689999875
No 61
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=54.38 E-value=13 Score=36.59 Aligned_cols=55 Identities=9% Similarity=0.134 Sum_probs=37.7
Q ss_pred ceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeCC-C------CCcEEEEEecCCCCCCeech
Q psy15469 69 TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSP-R------PESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 69 ~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~sp-r------P~sm~ieks~d~G~tW~p~q 130 (297)
...|.+..... .--|++||++...|+-|.++.... . -.+..|+-|. +|.+|..|+
T Consensus 293 ~~~W~~~~~~~------~qwlqVDLg~~~~vt~v~tqG~~~~~~~~~~~v~~y~l~~S~-dg~~W~~~~ 354 (579)
T 2qqk_A 293 DNGWTPNLDSN------KEYLQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVST-NGEDWMVYR 354 (579)
T ss_dssp SCCBCCSSCST------TCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEES-SSSSCEECE
T ss_pred CceecCCCCCC------CceEEeecceeEEEEEEEccCCccCCCCcccceEEEEEEEEC-CCCceeeee
Confidence 45676553211 235999999999999999997421 1 1345676665 599999875
No 62
>4ag4_A Epithelial discoidin domain-containing receptor 1; immune system-transferase complex; HET: NAG; 2.80A {Homo sapiens}
Probab=50.30 E-value=18 Score=33.70 Aligned_cols=44 Identities=9% Similarity=0.153 Sum_probs=32.7
Q ss_pred eeeEEEecCceEEEEEEEEEEeCC------CCCcEEEEEecCCCCCCeech
Q psy15469 86 QVNITLKFGKTFDVTYVRLLFWSP------RPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 86 ~V~itLdL~~~f~v~~v~l~F~sp------rP~sm~ieks~d~G~tW~p~q 130 (297)
.--|++||++...|+-|+++=... --.+..|+-| ++|.+|..|+
T Consensus 59 ~qWLQVDLg~~~~VtgV~TQGr~~~g~~~~wVtsY~l~yS-~DG~~W~~y~ 108 (351)
T 4ag4_A 59 EEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYS-RDGRRWMGWK 108 (351)
T ss_dssp CCCEEEEEEEEEEEEEEEEECBCGGGTCCBCCSEEEEEEE-SSSSCEEECC
T ss_pred CCEEEecCCCeEEEEEEEEecccCCCCccceEEEEEEEEE-eCCCcEEEEE
Confidence 347999999999999999986321 1245667665 5689999875
No 63
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=49.95 E-value=12 Score=35.75 Aligned_cols=42 Identities=10% Similarity=0.117 Sum_probs=31.7
Q ss_pred eEEEecCceEEEEEEEEEEeCC-C------CCcEEEEEecCCCCCCeech
Q psy15469 88 NITLKFGKTFDVTYVRLLFWSP-R------PESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 88 ~itLdL~~~f~v~~v~l~F~sp-r------P~sm~ieks~d~G~tW~p~q 130 (297)
-|+|||++...|+-|+++.... . -.+..|+-|. +|.+|..|+
T Consensus 187 wlqVDLg~~~~vt~v~tqG~~~~~~~~~~~v~~y~l~~S~-dg~~W~~~~ 235 (460)
T 2qqo_A 187 YLQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVST-NGEDWMVYR 235 (460)
T ss_dssp CEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEES-SSSSCEECE
T ss_pred eEeccCCceEEEEEEEeecCCCCCCCccceEEEEEEEEEc-CCCCeeEec
Confidence 5999999999999999997421 1 1345677665 589999875
No 64
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=47.29 E-value=15 Score=34.27 Aligned_cols=21 Identities=19% Similarity=0.281 Sum_probs=17.7
Q ss_pred CCcEEEEEecCCCCCCeechh
Q psy15469 111 PESFAIYKKTYENSSWTPFQF 131 (297)
Q Consensus 111 P~sm~ieks~d~G~tW~p~qy 131 (297)
...+.|+||.|.|+||+..+.
T Consensus 54 ~~~~~v~rS~DgG~TW~~~~~ 74 (367)
T 2ydt_A 54 NVWFPIVKSKDGGKTWKEISK 74 (367)
T ss_dssp CCCEEEEEESSTTSSCEEEEE
T ss_pred CeEEEEEEECCCCcCcCcCcc
Confidence 345789999999999999765
No 65
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=40.81 E-value=61 Score=31.81 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=31.4
Q ss_pred eeEEEecCceEEEEEEEEEEeCCC-----CCcEEEEEecCCCCCCeech
Q psy15469 87 VNITLKFGKTFDVTYVRLLFWSPR-----PESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 87 V~itLdL~~~f~v~~v~l~F~spr-----P~sm~ieks~d~G~tW~p~q 130 (297)
--|++||++...|+-|+++=...+ -.+..|.- +++|.+|++|+
T Consensus 465 qwLqVDLg~~~~VtgV~tQG~~~~~~~~~vtsY~l~y-S~Dg~~W~~~~ 512 (577)
T 4gz9_A 465 EWLQVDLGDEKIVRGVIIQGGKHRENKVFMRKFKIAY-SNNGSDWKTIM 512 (577)
T ss_dssp CCEEEEEEEEEEEEEEEEECEESSSCEECEEEEEEEE-ESSSSSCEECB
T ss_pred ceEEEECCCcEEEEEEEEeCCCCCCcceeEEEEEEEE-ECCCCCeEEEE
Confidence 469999999999999999853211 23445654 46789999885
No 66
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=40.15 E-value=15 Score=37.76 Aligned_cols=55 Identities=22% Similarity=0.271 Sum_probs=38.8
Q ss_pred ceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEeC-----CCCCcEEEEEecCCCCCCeech
Q psy15469 69 TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-----PRPESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 69 ~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~s-----prP~sm~ieks~d~G~tW~p~q 130 (297)
.+.|.+.... ..--|+|||++...|+-|+++-.. ..-.+..|+- +++|.+|..|.
T Consensus 654 ~~aW~a~~~d------~~qwLQVDLg~~~~VtgV~tQG~~~~~~~~~VtsY~l~y-S~DG~~W~~y~ 713 (770)
T 2r7e_B 654 SNAWRPQVNN------PKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISS-SQDGHQWTLFF 713 (770)
T ss_dssp TCSBCCSSCC------SSCCEEECCSSCCCBCCEEECCCCCTTCCCCCCEEEECC-BSSTTCBCCCB
T ss_pred CceEECCCCC------CCceEEEccccceEEEEEEEeCCcCcCcccceEEEEEEE-EcCCCcEEEEe
Confidence 5678665421 134799999999999999998642 2335566754 57789999875
No 67
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=39.94 E-value=24 Score=32.56 Aligned_cols=21 Identities=19% Similarity=0.460 Sum_probs=17.6
Q ss_pred CcEEEEEecCCCCCCeechhh
Q psy15469 112 ESFAIYKKTYENSSWTPFQFY 132 (297)
Q Consensus 112 ~sm~ieks~d~G~tW~p~qyf 132 (297)
..+.|+||.|.|+||+..+..
T Consensus 50 ~~~~v~rS~DgG~TW~~~~~v 70 (355)
T 3a72_A 50 VYFPIYRSKDHGKTWNEISRV 70 (355)
T ss_dssp CCEEEEEESSTTSCCEEEEEE
T ss_pred ceEEEEEEcCCCcCcCCCccc
Confidence 457899999999999997653
No 68
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=37.37 E-value=26 Score=32.63 Aligned_cols=23 Identities=9% Similarity=0.257 Sum_probs=18.5
Q ss_pred CCcEEEEEecCCCCCCeechhhH
Q psy15469 111 PESFAIYKKTYENSSWTPFQFYS 133 (297)
Q Consensus 111 P~sm~ieks~d~G~tW~p~qyfa 133 (297)
...+.|+||.|.|+||++..-.+
T Consensus 118 ~~~i~v~~S~D~G~TW~~~~~i~ 140 (367)
T 2ydt_A 118 ETLIEVYASRDKGYTWEFVSHVA 140 (367)
T ss_dssp CEEEEEEEESSSSSCCEEEEEEE
T ss_pred CCeEEEEEECCCCCCCcCCeecc
Confidence 34688999999999999986443
No 69
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=31.69 E-value=22 Score=23.60 Aligned_cols=26 Identities=19% Similarity=0.714 Sum_probs=19.0
Q ss_pred CCCCcccCCCCcceEecCCCCCCCCCCCc
Q psy15469 248 ECPYVRQSDGSTRRVCRCEHNTAGPDCNE 276 (297)
Q Consensus 248 ~C~~~~~~~~~~~~~C~C~HnT~G~~Ce~ 276 (297)
.|.+.. ......|.|..+..|..||.
T Consensus 20 ~C~~~~---~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 20 TCRFLV---QEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred EEeecc---CCCCeEEECCCCCcccCCCc
Confidence 565432 23456899999999999986
No 70
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=29.16 E-value=25 Score=32.48 Aligned_cols=22 Identities=9% Similarity=0.353 Sum_probs=18.0
Q ss_pred CcEEEEEecCCCCCCeechhhH
Q psy15469 112 ESFAIYKKTYENSSWTPFQFYS 133 (297)
Q Consensus 112 ~sm~ieks~d~G~tW~p~qyfa 133 (297)
..+.|++|.|.|+||++..-.+
T Consensus 114 ~~~~v~~S~D~G~TW~~~~~i~ 135 (355)
T 3a72_A 114 TDIVLYASQDDGMTWDFVSHIA 135 (355)
T ss_dssp EEEEEEEESSTTSCCEEEEEEE
T ss_pred ceEEEEEECCCCccCccCcccc
Confidence 3577999999999999987543
No 71
>2wn3_A Discoidin-1 subunit A; type-H lectin, cell adhesion, discoidin domain, lectin; HET: NGA GAL 1PG; 1.59A {Dictyostelium discoideum} PDB: 2w94_A* 2wn2_A* 2w95_A*
Probab=27.17 E-value=71 Score=28.02 Aligned_cols=53 Identities=21% Similarity=0.245 Sum_probs=35.1
Q ss_pred ceeEeccccCCCCCCCCeeeEEEecCc--eEEEEEEEEEEeCCCC---CcEEEEEecCCCCCCeech
Q psy15469 69 TTWWQSTTMYDGVQWPNQVNITLKFGK--TFDVTYVRLLFWSPRP---ESFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 69 ~twWQS~~~~~g~~~~~~V~itLdL~~--~f~v~~v~l~F~sprP---~sm~ieks~d~G~tW~p~q 130 (297)
...|....... .--| ||++ ...|+-|.++....-. .+..|+-| ++|.+|..|+
T Consensus 48 ~~aW~a~~~d~------~qwL--DLg~~~~~~VtgV~tQG~~~~~~~VtsY~l~yS-~dg~~W~~y~ 105 (254)
T 2wn3_A 48 SEAWCSSIVDT------NQYI--VAGCEVPRTFMCVALQGRGDADQWVTSYKIRYS-LDNVSWFEYR 105 (254)
T ss_dssp CSSEECSSCST------TCCE--EEEEEEEEEEEEEEEECCSSSSCEEEEEEEEEE-SSSSSCEEGG
T ss_pred CCeeeCCCCCc------hheE--EcCCCeEEEEEEEEEeCCCCCCCceEEEEEEEE-CCCCcEEEec
Confidence 56686654321 1234 9999 9999999999753211 24556555 5689999975
No 72
>3ecq_A Protein SPR0328, endo-alpha-N-acetylgalactosaminidase; distorted (beta/alpha)8 (TIM) barrel glycoside hydrolase DOM WALL; 2.90A {Streptococcus pneumoniae}
Probab=26.98 E-value=13 Score=40.52 Aligned_cols=43 Identities=14% Similarity=0.187 Sum_probs=0.0
Q ss_pred CCCceeccCCCCceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEE
Q psy15469 57 HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRL 104 (297)
Q Consensus 57 Hp~~~~~D~~~~~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l 104 (297)
.++.+++|.+ +.|+|.|.- .+...| -.|+|||++.+.|+.+..
T Consensus 1470 e~a~nAfDGn-~sT~WHT~w--s~~~~P--h~ItIDLge~~tVsGf~Y 1512 (1531)
T 3ecq_A 1470 EGLANAFDGN-LSSLWHTSW--GGGDVG--KPATMVLKEATEITGLRY 1512 (1531)
T ss_dssp ------------------------------------------------
T ss_pred ccHHhccCCC-CCCcEecCC--CCCCCC--eEEEEECCCceEEccEEE
Confidence 5889999974 699999852 222333 489999999999987643
No 73
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=26.70 E-value=29 Score=23.00 Aligned_cols=26 Identities=31% Similarity=0.848 Sum_probs=19.5
Q ss_pred CCCCcccCCCCcceEecCCCCCCCCCCCc
Q psy15469 248 ECPYVRQSDGSTRRVCRCEHNTAGPDCNE 276 (297)
Q Consensus 248 ~C~~~~~~~~~~~~~C~C~HnT~G~~Ce~ 276 (297)
.|.++. ......|.|..+..|..||.
T Consensus 24 ~C~~i~---~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 24 ECKYIE---HLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp EEEEET---TTTEEEEECCSSCCSSSCCC
T ss_pred EEEEec---CCCCeeEECCCCcccccccc
Confidence 666442 34467899999999999985
No 74
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=25.28 E-value=22 Score=33.82 Aligned_cols=24 Identities=33% Similarity=0.750 Sum_probs=21.7
Q ss_pred ceEecCCCCCCCCCCCc-CCccCCC
Q psy15469 260 RRVCRCEHNTAGPDCNE-CAPFYND 283 (297)
Q Consensus 260 ~~~C~C~HnT~G~~Ce~-C~p~y~~ 283 (297)
.+.|.|..+..|.+|+. |.++|++
T Consensus 262 ~~~C~C~~G~~G~~C~~~C~~G~~G 286 (423)
T 2gy5_A 262 PYGCSCATGWKGLQCNEACHPGFYG 286 (423)
T ss_dssp TTEEECCBTCBSGGGCBCCCTTBCS
T ss_pred CCeEEeCCCcccccccCccCCCCcC
Confidence 57899999999999997 9999986
No 75
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=23.42 E-value=22 Score=33.87 Aligned_cols=25 Identities=20% Similarity=0.485 Sum_probs=21.5
Q ss_pred ceEecCCCCCCCCCCCc-CCccCCCC
Q psy15469 260 RRVCRCEHNTAGPDCNE-CAPFYNDA 284 (297)
Q Consensus 260 ~~~C~C~HnT~G~~Ce~-C~p~y~~~ 284 (297)
.+.|.|..++.|.+|++ |.++|++.
T Consensus 215 ~g~C~C~~G~~G~~Ce~~C~~g~~g~ 240 (423)
T 2gy5_A 215 TGECICPPGFMGRTCEKACELHTFGR 240 (423)
T ss_dssp TCCEECCTTEESTTSCEECCTTEEST
T ss_pred CCcEeCCCCccCCCcccccCCCCCCC
Confidence 56899999999999997 98887654
No 76
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=22.26 E-value=26 Score=23.60 Aligned_cols=19 Identities=26% Similarity=0.894 Sum_probs=16.4
Q ss_pred CcceEecCCCCCCCCCCCc
Q psy15469 258 STRRVCRCEHNTAGPDCNE 276 (297)
Q Consensus 258 ~~~~~C~C~HnT~G~~Ce~ 276 (297)
.....|.|....+|.+||.
T Consensus 31 ~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 31 PSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp CCCEEEEECTTEESTTSCE
T ss_pred CCCEeEeCCCCCcCCCcCc
Confidence 4567899999999999985
No 77
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=22.25 E-value=58 Score=19.44 Aligned_cols=18 Identities=22% Similarity=0.619 Sum_probs=15.1
Q ss_pred cceEecCCCCCCCCCCCc
Q psy15469 259 TRRVCRCEHNTAGPDCNE 276 (297)
Q Consensus 259 ~~~~C~C~HnT~G~~Ce~ 276 (297)
+...|.|.....|.+|+.
T Consensus 22 ~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 22 NSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp TEEEEECCTTCCSTTSCC
T ss_pred CceEeECCCCCcCCccCC
Confidence 457899999999999873
No 78
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=22.13 E-value=88 Score=30.66 Aligned_cols=55 Identities=15% Similarity=0.141 Sum_probs=35.1
Q ss_pred ceeEeccccCCCCCCCCeeeEEEecCceEEEEEEEEEEe-CCCC--C----cEEEEEecCCCCCCeech
Q psy15469 69 TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRP--E----SFAIYKKTYENSSWTPFQ 130 (297)
Q Consensus 69 ~twWQS~~~~~g~~~~~~V~itLdL~~~f~v~~v~l~F~-sprP--~----sm~ieks~d~G~tW~p~q 130 (297)
...|...... ..--|++||++...|+-|+.+=. +... . +..|+-| ++|.+|..|+
T Consensus 294 ~~aW~~~~~~------~~qwlqVDl~~~~~it~v~tQG~~~~~~~~~~~v~~y~v~~s-~dg~~w~~y~ 355 (577)
T 4gz9_A 294 ENGWTPGEDS------YKEWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYRVDIS-SNGEDWISLK 355 (577)
T ss_dssp SCCBCCSSCC------TTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEE-SSSSSCEECB
T ss_pred CCcccCCCCC------CCeEEEEcCCCEEEEEEEEccCCCCCCCCcceeEEEEEEEEE-cCCCcEEEEe
Confidence 4557655321 13479999999999999998721 1111 1 2345444 6789999875
No 79
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=21.85 E-value=47 Score=21.23 Aligned_cols=18 Identities=33% Similarity=0.887 Sum_probs=15.5
Q ss_pred cceEecCCCCCCCCCCCc
Q psy15469 259 TRRVCRCEHNTAGPDCNE 276 (297)
Q Consensus 259 ~~~~C~C~HnT~G~~Ce~ 276 (297)
+...|.|....+|.+||.
T Consensus 26 ~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 26 SQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp TEEEEEECTTCSSTTSCC
T ss_pred CCEEEECCCCCccCCCCc
Confidence 457899999999999985
No 80
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=20.51 E-value=35 Score=22.43 Aligned_cols=26 Identities=23% Similarity=0.735 Sum_probs=19.4
Q ss_pred CCCCcccCCCCcceEecCCCCCCCCCCCc
Q psy15469 248 ECPYVRQSDGSTRRVCRCEHNTAGPDCNE 276 (297)
Q Consensus 248 ~C~~~~~~~~~~~~~C~C~HnT~G~~Ce~ 276 (297)
.|.+.. ......|.|..+..|..||.
T Consensus 20 ~C~~~~---~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 20 RCRFVV---AEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp CEEEET---TTTEEEECCCTTEETTTTCE
T ss_pred EEEeEc---CCCCeEEECCCCcccCCCCe
Confidence 565432 34466899999999999986
No 81
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=20.17 E-value=45 Score=20.89 Aligned_cols=19 Identities=21% Similarity=0.569 Sum_probs=15.6
Q ss_pred CcceEecCCCCCCCCCCCc
Q psy15469 258 STRRVCRCEHNTAGPDCNE 276 (297)
Q Consensus 258 ~~~~~C~C~HnT~G~~Ce~ 276 (297)
.+...|.|....+|.+|+.
T Consensus 23 ~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 23 LDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp TSSEEEECCTTEETTTTCE
T ss_pred CCCEEEEcCCCCcCCcCCc
Confidence 3467899999999999974
Done!