Your job contains 1 sequence.
>psy15469
MDNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVR
YLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKT
YENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLE
GRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARC
KCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDANECR
The BLAST search returned 16 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15469
(297 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
WB|WBGene00016913 - symbol:lam-2 species:6239 "Caenorhabd... 891 3.6e-88 1
FB|FBgn0002528 - symbol:LanB2 "Laminin B2" species:7227 "... 879 7.1e-87 1
UNIPROTKB|F1MAA7 - symbol:Lamc1 "Protein Lamc1" species:1... 831 9.3e-82 1
ZFIN|ZDB-GENE-021226-3 - symbol:lamc1 "laminin, gamma 1" ... 827 2.4e-81 1
UNIPROTKB|F1S663 - symbol:LAMC1 "Uncharacterized protein"... 823 6.7e-81 1
UNIPROTKB|F1MD77 - symbol:LAMC1 "Uncharacterized protein"... 822 8.6e-81 1
UNIPROTKB|P11047 - symbol:LAMC1 "Laminin subunit gamma-1"... 818 2.3e-80 1
MGI|MGI:1344394 - symbol:Lamc3 "laminin gamma 3" species:... 808 2.6e-79 1
MGI|MGI:99914 - symbol:Lamc1 "laminin, gamma 1" species:1... 808 2.7e-79 1
UNIPROTKB|F1NK49 - symbol:LAMC1 "Uncharacterized protein"... 795 6.7e-78 1
UNIPROTKB|F1S0X0 - symbol:LAMC3 "Uncharacterized protein"... 793 1.0e-77 1
UNIPROTKB|F1N0T1 - symbol:Bt.54919 "Uncharacterized prote... 786 5.9e-77 1
UNIPROTKB|Q9Y6N6 - symbol:LAMC3 "Laminin subunit gamma-3"... 784 9.4e-77 1
RGD|1309399 - symbol:Lamc3 "laminin gamma 3" species:1011... 783 1.2e-76 1
UNIPROTKB|F1NCH8 - symbol:F1NCH8 "Uncharacterized protein... 770 2.2e-75 1
ZFIN|ZDB-GENE-990415-169 - symbol:ntn1a "netrin 1a" speci... 688 9.2e-68 1
ZFIN|ZDB-GENE-990415-168 - symbol:ntn1b "netrin 1b" speci... 677 1.3e-66 1
UNIPROTKB|Q90922 - symbol:NTN1 "Netrin-1" species:9031 "G... 672 4.5e-66 1
UNIPROTKB|F1N0C7 - symbol:NTN1 "Uncharacterized protein" ... 661 6.7e-65 1
UNIPROTKB|F1PSP7 - symbol:NTN1 "Uncharacterized protein" ... 661 6.7e-65 1
UNIPROTKB|O95631 - symbol:NTN1 "Netrin-1" species:9606 "H... 661 6.7e-65 1
UNIPROTKB|F1SS89 - symbol:NTN1 "Netrin-1" species:9823 "S... 661 6.7e-65 1
UNIPROTKB|Q2HXW4 - symbol:NTN1 "Netrin-1" species:9823 "S... 661 6.7e-65 1
UNIPROTKB|F1PHK9 - symbol:LAMC1 "Uncharacterized protein"... 671 1.0e-64 1
MGI|MGI:105088 - symbol:Ntn1 "netrin 1" species:10090 "Mu... 658 1.4e-64 1
RGD|619809 - symbol:Ntn1 "netrin 1" species:10116 "Rattus... 658 1.4e-64 1
UNIPROTKB|F1LPC8 - symbol:Ntn1 "Netrin-1" species:10116 "... 658 1.4e-64 1
UNIPROTKB|Q90923 - symbol:NTN3 "Netrin-3" species:9031 "G... 522 2.6e-59 2
ZFIN|ZDB-GENE-050310-2 - symbol:ntn2 "netrin 2" species:7... 597 4.0e-58 1
FB|FBgn0015774 - symbol:NetB "Netrin-B" species:7227 "Dro... 334 2.5e-51 3
WB|WBGene00006746 - symbol:unc-6 species:6239 "Caenorhabd... 519 7.4e-50 1
UNIPROTKB|P34710 - symbol:unc-6 "Netrin unc-6" species:62... 519 7.4e-50 1
FB|FBgn0015773 - symbol:NetA "Netrin-A" species:7227 "Dro... 317 2.8e-48 2
UNIPROTKB|F1NQ51 - symbol:LAMA3 "Uncharacterized protein"... 496 1.6e-45 1
MGI|MGI:99909 - symbol:Lama3 "laminin, alpha 3" species:1... 489 9.0e-45 1
UNIPROTKB|E2RPP1 - symbol:LAMA3 "Uncharacterized protein"... 484 3.1e-44 1
UNIPROTKB|F1MAN8 - symbol:Lama5 "Protein Lama5" species:1... 481 7.3e-44 1
FB|FBgn0002526 - symbol:LanA "Laminin A" species:7227 "Dr... 450 1.0e-43 2
MGI|MGI:105382 - symbol:Lama5 "laminin, alpha 5" species:... 477 1.9e-43 1
UNIPROTKB|Q16787 - symbol:LAMA3 "Laminin subunit alpha-3"... 469 1.2e-42 1
UNIPROTKB|O15230 - symbol:LAMA5 "Laminin subunit alpha-5"... 469 1.4e-42 1
ZFIN|ZDB-GENE-030131-9823 - symbol:lama5 "laminin, alpha ... 465 3.6e-42 1
UNIPROTKB|F1LU77 - symbol:F1LU77 "Uncharacterized protein... 456 2.7e-41 1
UNIPROTKB|F1MC13 - symbol:LAMA5 "Uncharacterized protein"... 452 8.5e-41 1
UNIPROTKB|F1MDD5 - symbol:Bt.12589 "Uncharacterized prote... 451 9.4e-41 1
UNIPROTKB|F1NZZ2 - symbol:LAMA5 "Uncharacterized protein"... 446 3.7e-40 1
UNIPROTKB|E2R3Q6 - symbol:NTN3 "Uncharacterized protein" ... 374 1.2e-37 2
UNIPROTKB|F1SUI0 - symbol:NTN3 "Uncharacterized protein" ... 373 1.7e-37 2
WB|WBGene00002248 - symbol:lam-3 species:6239 "Caenorhabd... 420 1.7e-37 1
UNIPROTKB|P25391 - symbol:LAMA1 "Laminin subunit alpha-1"... 408 5.6e-37 2
UNIPROTKB|F1LXY9 - symbol:Lama2 "Protein Lama2" species:1... 369 7.9e-37 2
RGD|619811 - symbol:Ntn3 "netrin 3" species:10116 "Rattus... 360 1.3e-36 2
MGI|MGI:1341188 - symbol:Ntn3 "netrin 3" species:10090 "M... 361 3.6e-36 2
UNIPROTKB|G3N0E7 - symbol:NTN3 "Uncharacterized protein" ... 358 1.0e-35 2
UNIPROTKB|G3V6X3 - symbol:Ntn3 "Netrin 2-like (Chicken)" ... 360 1.3e-35 2
MGI|MGI:99892 - symbol:Lama1 "laminin, alpha 1" species:1... 389 1.3e-35 2
UNIPROTKB|F1MEG3 - symbol:LAMA1 "Uncharacterized protein"... 390 2.1e-35 2
RGD|1307207 - symbol:Lama1 "laminin, alpha 1" species:101... 387 2.8e-35 2
RGD|1308889 - symbol:Lama2 "laminin, alpha 2" species:101... 369 2.0e-34 2
UNIPROTKB|F1P4C0 - symbol:NTN4 "Uncharacterized protein" ... 340 3.3e-34 2
UNIPROTKB|F1PEZ5 - symbol:LAMA2 "Uncharacterized protein"... 361 5.2e-34 2
UNIPROTKB|F1PVY5 - symbol:LAMA2 "Uncharacterized protein"... 361 5.3e-34 2
UNIPROTKB|F1PJ02 - symbol:LAMA1 "Uncharacterized protein"... 387 5.4e-34 1
UNIPROTKB|F1P420 - symbol:LAMA2 "Uncharacterized protein"... 364 6.3e-34 3
UNIPROTKB|F1N8P9 - symbol:LAMA1 "Uncharacterized protein"... 386 7.0e-34 1
UNIPROTKB|F1NM47 - symbol:LAMA1 "Uncharacterized protein"... 386 7.0e-34 1
UNIPROTKB|Q9Y2I2 - symbol:NTNG1 "Netrin-G1" species:9606 ... 368 8.9e-34 1
ZFIN|ZDB-GENE-060118-1 - symbol:lama1 "laminin, alpha 1" ... 385 9.0e-34 1
UNIPROTKB|O00634 - symbol:NTN3 "Netrin-3" species:9606 "H... 341 9.7e-34 2
MGI|MGI:1934028 - symbol:Ntng1 "netrin G1" species:10090 ... 367 1.2e-33 1
UNIPROTKB|A1A4H7 - symbol:MGC139448 "Uncharacterized prot... 366 1.2e-33 1
ZFIN|ZDB-GENE-060119-1 - symbol:lama2 "laminin, alpha 2" ... 367 1.8e-33 2
UNIPROTKB|P24043 - symbol:LAMA2 "Laminin subunit alpha-2"... 365 2.3e-33 2
UNIPROTKB|E1BWU4 - symbol:E1BWU4 "Uncharacterized protein... 362 4.8e-33 1
UNIPROTKB|F1S575 - symbol:NTNG2 "Uncharacterized protein"... 357 1.1e-32 1
UNIPROTKB|G3N1H6 - symbol:NTNG2 "Uncharacterized protein"... 341 2.2e-32 2
UNIPROTKB|F1MMT2 - symbol:LAMA2 "Uncharacterized protein"... 369 4.5e-32 1
MGI|MGI:99912 - symbol:Lama2 "laminin, alpha 2" species:1... 365 1.2e-31 1
RGD|1563465 - symbol:Ntng1 "netrin G1" species:10116 "Rat... 346 1.6e-31 1
UNIPROTKB|F1LWK9 - symbol:Ntng1 "Protein Ntng1" species:1... 346 1.6e-31 1
UNIPROTKB|F1LX88 - symbol:Ntng1 "Protein Ntng1" species:1... 346 1.6e-31 1
UNIPROTKB|F1LYF9 - symbol:Ntng1 "Protein Ntng1" species:1... 346 1.6e-31 1
UNIPROTKB|F1LYH8 - symbol:Ntng1 "Protein Ntng1" species:1... 346 1.6e-31 1
UNIPROTKB|F1LZW7 - symbol:Ntng1 "Protein Ntng1" species:1... 346 1.6e-31 1
WB|WBGene00001328 - symbol:epi-1 species:6239 "Caenorhabd... 359 6.5e-31 1
WB|WBGene00002247 - symbol:lam-1 species:6239 "Caenorhabd... 355 7.0e-31 1
UNIPROTKB|F1P486 - symbol:LOC416036 "Uncharacterized prot... 344 1.1e-30 1
UNIPROTKB|Q9HB63 - symbol:NTN4 "Netrin-4" species:9606 "H... 342 2.1e-30 1
MGI|MGI:1888978 - symbol:Ntn4 "netrin 4" species:10090 "M... 340 3.5e-30 1
UNIPROTKB|F1SQR3 - symbol:NTN4 "Uncharacterized protein" ... 338 5.7e-30 1
UNIPROTKB|Q96CW9 - symbol:NTNG2 "Netrin-G2" species:9606 ... 334 6.9e-30 1
UNIPROTKB|F1NI05 - symbol:LAMC1 "Uncharacterized protein"... 341 8.8e-30 1
RGD|1307089 - symbol:Ntng2 "netrin G2" species:10116 "Rat... 333 1.3e-29 1
UNIPROTKB|F1S0U7 - symbol:NTNG2 "Uncharacterized protein"... 315 1.5e-29 2
UNIPROTKB|F1MNT4 - symbol:LAMB1 "Uncharacterized protein"... 341 2.2e-29 1
UNIPROTKB|F1SAE9 - symbol:LAMB1 "Uncharacterized protein"... 341 2.2e-29 1
MGI|MGI:2159341 - symbol:Ntng2 "netrin G2" species:10090 ... 331 2.6e-29 1
UNIPROTKB|A4D0S4 - symbol:LAMB4 "Laminin subunit beta-4" ... 340 2.7e-29 1
UNIPROTKB|Q01635 - symbol:LAMB1 "Laminin subunit beta-1" ... 324 3.4e-29 1
ZFIN|ZDB-GENE-081030-4 - symbol:lamb2 "laminin, beta 2 (l... 339 3.5e-29 1
WARNING: Descriptions of 47 database sequences were not reported due to the
limiting value of parameter V = 100.
>WB|WBGene00016913 [details] [associations]
symbol:lam-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] GO:GO:0008340 GO:GO:0009792 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 EMBL:FO080795
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 PIR:T28811 RefSeq:NP_509204.3
IntAct:Q18823 MINT:MINT-118164 STRING:Q18823 PaxDb:Q18823
EnsemblMetazoa:C54D1.5.1 EnsemblMetazoa:C54D1.5.2 GeneID:180980
KEGG:cel:CELE_C54D1.5 UCSC:C54D1.5 CTD:180980 WormBase:C54D1.5
eggNOG:NOG235720 GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
InParanoid:Q18823 OMA:DRCKENK NextBio:911826 Uniprot:Q18823
Length = 1633
Score = 891 (318.7 bits), Expect = 3.6e-88, P = 3.6e-88
Identities = 170/301 (56%), Positives = 210/301 (69%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHV----TANTCDYCYED-THP 58
RC+P F NAAF+ V+ TNTCG + +PT+FCVQSG H TCD +E +HP
Sbjct: 50 RCVPDFVNAAFNLEVQVTNTCGTK----RPTKFCVQSG-HTGQRSVCETCDDRHEGFSHP 104
Query: 59 VRYLTDLS--NTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+YLTD + N TWWQS TM +G Q+P N+TL GK+FD+TYVRL F SPRPESF I
Sbjct: 105 AKYLTDFNVGNNETWWQSDTMQEGQQYPTTTNLTLVLGKSFDITYVRLKFISPRPESFTI 164
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YKKT+ +S W P+QFYS SC+ TYGL D + ++ CT E+SD+SP+TGG + F
Sbjct: 165 YKKTHTDSEWEPWQFYSGSCRATYGL-SDRAPILPGNEATAQCTKEFSDISPITGGNIAF 223
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISV 236
+TLEGR A F + LQ++VTA+ IRI+L+R+NTF DE+F DP VLRSY+YAI+D +V
Sbjct: 224 STLEGRPSAHAFEESEVLQKWVTASAIRISLNRMNTFGDEVFKDPQVLRSYYYAISDFAV 283
Query: 237 GARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANE 295
G RCKCNGHASEC DG R VCRCEHNT G DCNEC PFYND PWR + +ANE
Sbjct: 284 GGRCKCNGHASECVGSSSVDGENRLVCRCEHNTQGADCNECLPFYNDRPWRSGTSVEANE 343
Query: 296 C 296
C
Sbjct: 344 C 344
>FB|FBgn0002528 [details] [associations]
symbol:LanB2 "Laminin B2" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] EMBL:AE014296
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 OMA:DRCKENK KO:K05635 EMBL:M58417
EMBL:M25063 EMBL:BT021394 PIR:A31483 RefSeq:NP_524006.1
UniGene:Dm.2551 ProteinModelPortal:P15215 SMR:P15215 DIP:DIP-21994N
IntAct:P15215 MINT:MINT-810240 STRING:P15215 PaxDb:P15215
PRIDE:P15215 EnsemblMetazoa:FBtr0076382 GeneID:39118
KEGG:dme:Dmel_CG3322 CTD:39118 FlyBase:FBgn0002528
HOGENOM:HOG000264193 InParanoid:P15215 OrthoDB:EOG434TMX
PhylomeDB:P15215 GenomeRNAi:39118 NextBio:812009 Bgee:P15215
GermOnline:CG3322 Uniprot:P15215
Length = 1639
Score = 879 (314.5 bits), Expect = 7.1e-87, P = 7.1e-87
Identities = 163/298 (54%), Positives = 208/298 (69%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYC-YEDTHPVRYL 62
+C+P F NAA+ +ESTNTCG QN FC+Q+ N C++C Y D +P +L
Sbjct: 66 KCLPEFINAAYQLQIESTNTCGEQND----NHFCIQTMNQNHKN-CEFCKYNDHNP-SFL 119
Query: 63 TDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKT 120
TDL + + TWWQS TM++G+Q PN VN+TL GK++D+TYVR+LF SPRPESF IYK+T
Sbjct: 120 TDLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDITYVRILFRSPRPESFTIYKRT 179
Query: 121 YENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLE 180
E+ W P+QFYSA+C++TY LPD + + + + CTSEYSD+SPL G + F+TLE
Sbjct: 180 SESGPWIPYQFYSATCRDTYSLPDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFSTLE 239
Query: 181 GRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARC 240
GR F + LQE+VTAT+IRITLDRLNTF DELF D VL+SYFYAI+DI+VGARC
Sbjct: 240 GRPSGINFERSGELQEWVTATDIRITLDRLNTFGDELFGDSQVLKSYFYAISDIAVGARC 299
Query: 241 KCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA-SDDANECR 297
KCNGHAS+C G VC C HNT GPDC+ C P YND W+R+ S + NEC+
Sbjct: 300 KCNGHASKCVPSTGMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECK 357
>UNIPROTKB|F1MAA7 [details] [associations]
symbol:Lamc1 "Protein Lamc1" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0022617 "extracellular matrix disassembly" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0043259
"laminin-10 complex" evidence=IEA] RGD:621052 GO:GO:0016477
GO:GO:0006461 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 GO:GO:0031175 GO:GO:0031581 GO:GO:0022617
GO:GO:0005201 GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 CTD:3915 KO:K05635
OMA:EATDYPW IPI:IPI00363849 RefSeq:NP_446418.1 UniGene:Rn.7145
ProteinModelPortal:F1MAA7 Ensembl:ENSRNOT00000003605 GeneID:117036
KEGG:rno:117036 NextBio:619829 Uniprot:F1MAA7
Length = 1607
Score = 831 (297.6 bits), Expect = 9.3e-82, P = 9.3e-82
Identities = 159/300 (53%), Positives = 203/300 (67%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDT----HPV 59
RC+P F NAAF+ +V +TNTCG P P +CVQ+G +C C H
Sbjct: 47 RCMPEFVNAAFNVTVVATNTCG----TP-PEEYCVQTGVTGVTKSCHLCDAGQLHLQHGA 101
Query: 60 RYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
+LTD +N TTWWQS TM GVQ+PN +N+TL GK FD+TYVRL F + RPESFAIY
Sbjct: 102 AFLTDYNNQADTTWWQSQTMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIY 161
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K+T E+ W P+Q+YS SC+ TY + + + + CT E+SD+SPLTGG V F+
Sbjct: 162 KRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFS 221
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQE+VTAT+IR+TL+RLNTF DE+F DP VL+SY+YAI+D +VG
Sbjct: 222 TLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVG 281
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANEC 296
RCKCNGHASEC V+ G + VC C+HNT G DC +C PF+ND PWRRA+ + AN+C
Sbjct: 282 GRCKCNGHASEC--VKNEFG--KLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESANQC 337
>ZFIN|ZDB-GENE-021226-3 [details] [associations]
symbol:lamc1 "laminin, gamma 1" species:7955 "Danio
rerio" [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007634 "optokinetic behavior" evidence=IMP]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=IMP] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] ZFIN:ZDB-GENE-021226-3 GO:GO:0007155
PROSITE:PS00022 GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0050908 GO:GO:0031290 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0007634 eggNOG:NOG235720 GeneTree:ENSGT00690000102103
HOGENOM:HOG000019301 EMBL:AF468048 EMBL:BX681417 EMBL:BX571812
IPI:IPI00496826 RefSeq:NP_775384.1 UniGene:Dr.132970
ProteinModelPortal:Q1LVF0 SMR:Q1LVF0 STRING:Q1LVF0
Ensembl:ENSDART00000004277 GeneID:286832 KEGG:dre:286832 CTD:3915
HOVERGEN:HBG100808 InParanoid:Q8JHV8 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS NextBio:20806483 ArrayExpress:Q1LVF0 Bgee:Q1LVF0
Uniprot:Q1LVF0
Length = 1593
Score = 827 (296.2 bits), Expect = 2.4e-81, P = 2.4e-81
Identities = 159/300 (53%), Positives = 206/300 (68%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYE-DT---HPV 59
RC+P F NAAF+A+V +TNTCG P P FCVQ+G +C C D H
Sbjct: 33 RCMPEFVNAAFNATVVATNTCGS----P-PEEFCVQTGVTGVTKSCHICNAADPRLHHGA 87
Query: 60 RYLTDLSNTT--TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
YLTD + TWWQS TM G+Q+PN +N+TL GK+FD+TYVRL F + RPESFAIY
Sbjct: 88 VYLTDYNQPVQPTWWQSQTMLAGIQYPNSINLTLHLGKSFDITYVRLKFHTSRPESFAIY 147
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K++ E+ WTP+Q+YS SC++TY + + + + + CT E+SD+SPL GG V F+
Sbjct: 148 KRSSEDGPWTPYQYYSGSCEKTYSKNNRGFIRTGEDEQQALCTDEFSDISPLYGGNVAFS 207
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQ++VTAT+IR+TL+RLNTF DE+F DP VL+SY+YAI+D +VG
Sbjct: 208 TLEGRPSAYNFDNSPVLQDWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVG 267
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANEC 296
RCKCNGHASEC V+ ++ VC C+HNT G DCN C PFYND PWRRA+ ++ NEC
Sbjct: 268 GRCKCNGHASEC--VKNE--YSKLVCNCKHNTEGADCNVCKPFYNDRPWRRATAENPNEC 323
>UNIPROTKB|F1S663 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:CU914232 Ensembl:ENSSSCT00000016945
Uniprot:F1S663
Length = 1606
Score = 823 (294.8 bits), Expect = 6.7e-81, P = 6.7e-81
Identities = 158/300 (52%), Positives = 202/300 (67%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDT----HPV 59
RC+P F NAAF+ +V +TNTCG P P +CVQ+G +C C H
Sbjct: 48 RCMPEFVNAAFNVTVVATNTCG----TP-PEEYCVQTGVTGVTKSCHLCDAGQPHLQHGA 102
Query: 60 RYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
+LTD +N TTWWQS TM GVQ+PN +N+TL GK FD+TYVRL F + RPESFAIY
Sbjct: 103 AFLTDYNNQADTTWWQSQTMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIY 162
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K+T E+ W P+Q+YS SC+ TY + + + + CT E+SD+SPLTGG V F+
Sbjct: 163 KRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFS 222
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQE+VTAT+IR+TL+RLNTF DE+F DP VL+SY+YAI+D +VG
Sbjct: 223 TLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVG 282
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANEC 296
RCKCNGHASEC + D + VC C+HNT G DC +C PF+ND PWRRA+ + A+EC
Sbjct: 283 GRCKCNGHASEC-VKNEFD---KLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASEC 338
>UNIPROTKB|F1MD77 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:DAAA02043571 EMBL:DAAA02043567
EMBL:DAAA02043568 EMBL:DAAA02043569 EMBL:DAAA02043570
IPI:IPI01018593 UniGene:Bt.19081 Ensembl:ENSBTAT00000015881
Uniprot:F1MD77
Length = 1608
Score = 822 (294.4 bits), Expect = 8.6e-81, P = 8.6e-81
Identities = 158/301 (52%), Positives = 202/301 (67%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDT----HPV 59
RC+P F NAAF+ +V +TNTCG P P +CVQ+G +C C H
Sbjct: 48 RCMPEFVNAAFNVTVVATNTCG----TP-PEEYCVQTGVTGVTKSCHLCDAGQPHLQHGA 102
Query: 60 RYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
+LTD +N TTWWQS TM GVQ+PN +N+TL GK FD+TYVRL F + RPESFAIY
Sbjct: 103 AFLTDYNNQADTTWWQSQTMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIY 162
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K+T E+ W P+Q+YS SC+ TY + + + CT E+SD+SPLTGG V F+
Sbjct: 163 KRTREDGPWIPYQYYSGSCENTYSKATRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFS 222
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQE+VTAT+IR+TL+RLNTF DE+F DP VL+SY+YAI+D +VG
Sbjct: 223 TLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVG 282
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANEC 296
RCKCNGHASEC + D + VC C+HNT G DC +C PF+ND PWRRA+ + A+EC
Sbjct: 283 GRCKCNGHASEC-VKNEFD---KLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASEC 338
Query: 297 R 297
+
Sbjct: 339 Q 339
>UNIPROTKB|P11047 [details] [associations]
symbol:LAMC1 "Laminin subunit gamma-1" species:9606 "Homo
sapiens" [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=NAS;TAS] [GO:0005615
"extracellular space" evidence=NAS] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0007492 "endoderm development" evidence=TAS]
[GO:0016477 "cell migration" evidence=IMP] [GO:0022617
"extracellular matrix disassembly" evidence=IMP] [GO:0006461
"protein complex assembly" evidence=IDA] [GO:0031581 "hemidesmosome
assembly" evidence=IMP] [GO:0005201 "extracellular matrix
structural constituent" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IDA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11
complex" evidence=TAS] [GO:0043259 "laminin-10 complex"
evidence=TAS] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=IDA] Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0005615 GO:GO:0016477
GO:GO:0006461 GO:GO:0070062 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0007492
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0050679
GO:GO:0031581 DrugBank:DB00015 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0005606 GO:GO:0043259 GO:GO:0043260
CleanEx:HS_LAMB2 CTD:3915 HOVERGEN:HBG100808 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS EMBL:J03202 EMBL:M55210 EMBL:M55217 EMBL:M55201
EMBL:M55211 EMBL:M55212 EMBL:M55213 EMBL:M55214 EMBL:M55215
EMBL:M55216 EMBL:M55192 EMBL:M55193 EMBL:M55194 EMBL:M55195
EMBL:M55196 EMBL:M55197 EMBL:M55198 EMBL:M55199 EMBL:M55200
EMBL:M55202 EMBL:M55203 EMBL:M55204 EMBL:M55205 EMBL:M55206
EMBL:M55207 EMBL:M55208 EMBL:M55209 EMBL:AL354953 EMBL:AL450304
EMBL:X13939 EMBL:M27654 IPI:IPI00298281 PIR:S13548
RefSeq:NP_002284.3 UniGene:Hs.609663 ProteinModelPortal:P11047
SMR:P11047 IntAct:P11047 MINT:MINT-1184520 STRING:P11047
PhosphoSite:P11047 DMDM:224471885 PaxDb:P11047 PRIDE:P11047
Ensembl:ENST00000258341 GeneID:3915 KEGG:hsa:3915 UCSC:uc001gpy.4
GeneCards:GC01P182992 H-InvDB:HIX0001405 HGNC:HGNC:6492
HPA:CAB004486 HPA:HPA001908 HPA:HPA001909 MIM:150290
neXtProt:NX_P11047 PharmGKB:PA30280 InParanoid:P11047
PhylomeDB:P11047 ChiTaRS:LAMC1 GenomeRNAi:3915 NextBio:15381
Bgee:P11047 CleanEx:HS_LAMC1 Genevestigator:P11047
GermOnline:ENSG00000135862 Uniprot:P11047
Length = 1609
Score = 818 (293.0 bits), Expect = 2.3e-80, P = 2.3e-80
Identities = 157/300 (52%), Positives = 202/300 (67%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDT----HPV 59
RC+P F NAAF+ +V +TNTCG P P +CVQ+G +C C H
Sbjct: 49 RCMPEFVNAAFNVTVVATNTCG----TP-PEEYCVQTGVTGVTKSCHLCDAGQPHLQHGA 103
Query: 60 RYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
+LTD +N TTWWQS TM GVQ+P+ +N+TL GK FD+TYVRL F + RPESFAIY
Sbjct: 104 AFLTDYNNQADTTWWQSQTMLAGVQYPSSINLTLHLGKAFDITYVRLKFHTSRPESFAIY 163
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K+T E+ W P+Q+YS SC+ TY + + + + CT E+SD+SPLTGG V F+
Sbjct: 164 KRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFS 223
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQE+VTAT+IR+TL+RLNTF DE+F DP VL+SY+YAI+D +VG
Sbjct: 224 TLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVG 283
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANEC 296
RCKCNGHASEC + D + VC C+HNT G DC +C PF+ND PWRRA+ + A+EC
Sbjct: 284 GRCKCNGHASEC-MKNEFD---KLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASEC 339
>MGI|MGI:1344394 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
MGI:MGI:1344394 GO:GO:0007601 GO:GO:0007155 PROSITE:PS00022
GO:GO:0060041 PROSITE:PS01186 EMBL:CH466542 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
HOVERGEN:HBG100808 CTD:10319 KO:K06247 OrthoDB:EOG498TZW
EMBL:AF083372 EMBL:AL928893 EMBL:BX511243 EMBL:BC096366
EMBL:AF079520 IPI:IPI00756854 RefSeq:NP_035966.2 UniGene:Mm.302362
ProteinModelPortal:Q9R0B6 SMR:Q9R0B6 STRING:Q9R0B6 PaxDb:Q9R0B6
PRIDE:Q9R0B6 Ensembl:ENSMUST00000028187 GeneID:23928 KEGG:mmu:23928
OMA:QRGRRCE NextBio:303725 Bgee:Q9R0B6 CleanEx:MM_LAMC3
Genevestigator:Q9R0B6 GermOnline:ENSMUSG00000026840 Uniprot:Q9R0B6
Length = 1581
Score = 808 (289.5 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 155/301 (51%), Positives = 201/301 (66%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVR--- 60
RC+P FENAAF E+++TCG P P FC G C C +D P R
Sbjct: 43 RCLPEFENAAFGRRAEASHTCGR----P-PEDFCPHVGAPGAGLQCQRC-DDADPGRRHD 96
Query: 61 --YLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
YLTD + +TWWQS +M GVQ+P VN+TL GK +++TYVRL F + RPESFAI
Sbjct: 97 ASYLTDFHSPDDSTWWQSPSMAFGVQYPTSVNLTLSLGKAYEITYVRLKFHTSRPESFAI 156
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK+TY + W P+Q+YSASCQ+TYG P+ + + + + FCTSE+SD+SPL GG V F
Sbjct: 157 YKRTYASGPWEPYQYYSASCQKTYGRPEGHYLRPGEDERVAFCTSEFSDISPLNGGNVAF 216
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISV 236
+TLEGR A F + LQE+VT+T+I I+LDRLNTF D++F DP VL+SY+YA++D SV
Sbjct: 217 STLEGRPSAYNFEESPVLQEWVTSTDILISLDRLNTFGDDIFKDPRVLQSYYYAVSDFSV 276
Query: 237 GARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANE 295
G RCKCNGHASEC + + + + CRC+HNT G DC C PF+ D PW R + +DANE
Sbjct: 277 GGRCKCNGHASEC----EPNAAGQLACRCQHNTTGVDCERCLPFFQDRPWARGTAEDANE 332
Query: 296 C 296
C
Sbjct: 333 C 333
>MGI|MGI:99914 [details] [associations]
symbol:Lamc1 "laminin, gamma 1" species:10090 "Mus musculus"
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=ISO]
[GO:0006461 "protein complex assembly" evidence=ISO] [GO:0007155
"cell adhesion" evidence=ISO] [GO:0016477 "cell migration"
evidence=ISO] [GO:0022617 "extracellular matrix disassembly"
evidence=ISO] [GO:0031012 "extracellular matrix" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IPI] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:99914 GO:GO:0016477
GO:GO:0006461 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_127416 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0043259 HOVERGEN:HBG100808
OrthoDB:EOG49GKFS EMBL:X05211 EMBL:J03484 EMBL:J02930 EMBL:J03749
IPI:IPI00400016 PIR:A28469 PIR:S55783 UniGene:Mm.1249 PDB:1KLO
PDB:1NPE PDB:1TLE PDB:4AQT PDBsum:1KLO PDBsum:1NPE PDBsum:1TLE
PDBsum:4AQT ProteinModelPortal:P02468 SMR:P02468 MINT:MINT-1031545
STRING:P02468 PhosphoSite:P02468 PaxDb:P02468 PRIDE:P02468
UCSC:uc007czu.1 InParanoid:P02468 EvolutionaryTrace:P02468
CleanEx:MM_LAMC1 Genevestigator:P02468
GermOnline:ENSMUSG00000026478 Uniprot:P02468
Length = 1607
Score = 808 (289.5 bits), Expect = 2.7e-79, P = 2.7e-79
Identities = 158/299 (52%), Positives = 205/299 (68%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSG-THVT--ANTCDYCYEDT-HPV 59
RC+P F NAAF+ +V +TNTCG P P +CVQ+G T VT + CD + H
Sbjct: 47 RCMPEFVNAAFNVTVVATNTCG----TP-PEEYCVQTGVTGVTKSCHLCDAGQQHLQHGA 101
Query: 60 RYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
+LTD +N TTWWQS TM GVQ+PN +N+TL GK FD+TYVRL F + RPESFAIY
Sbjct: 102 AFLTDYNNQADTTWWQSQTMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIY 161
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K+T E+ W P+Q+YS SC+ TY + + + + CT E+SD+SPLTGG V F+
Sbjct: 162 KRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFS 221
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQE+VTAT+IR+TL+RLNTF DE+F +P VL+SY+YAI+D +VG
Sbjct: 222 TLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNEPKVLKSYYYAISDFAVG 281
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANE 295
RCKCNGHASEC + D + +C C+HNT G DC +C PF+ND PWRRA+ + A+E
Sbjct: 282 GRCKCNGHASEC-VKNEFD---KLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASE 336
>UNIPROTKB|F1NK49 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00596936
Ensembl:ENSGALT00000007355 ArrayExpress:F1NK49 Uniprot:F1NK49
Length = 1608
Score = 795 (284.9 bits), Expect = 6.7e-78, P = 6.7e-78
Identities = 158/299 (52%), Positives = 204/299 (68%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSG-THVTA-NTCDYCYEDT-HPVR 60
RC+P F NAAF+ +V +TNTCG P +CVQ+G T VT+ + CD H
Sbjct: 50 RCMPEFVNAAFN-TVVATNTCG----TPAE-EYCVQTGVTGVTSCHLCDASQPHLRHGAS 103
Query: 61 YLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYK 118
+LTD + +TWWQS +M GVQ P VN+TL GK FD+TYVRL F + RPESFAIYK
Sbjct: 104 FLTDYNRQADSTWWQSQSMLAGVQHPAAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYK 163
Query: 119 KTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFAT 178
+T E+ W P+Q+YS SC+ TY + + + + + CT E+SD+SPLTGG V F+T
Sbjct: 164 RTREDGPWVPYQYYSGSCESTYNKVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFST 223
Query: 179 LEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGA 238
LEGR A F + LQE+VTAT+IR++L+RLNTF DE+F DP VL+SY+YAI+D +VG
Sbjct: 224 LEGRPSAYNFDNSPVLQEWVTATDIRVSLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGG 283
Query: 239 RCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANEC 296
RCKCNGHASEC +R G + VC C+HNT G DC +C PF+ND PWRRA+ + ANEC
Sbjct: 284 RCKCNGHASEC--IRNELG--KLVCNCKHNTFGDDCEKCLPFFNDRPWRRATAESANEC 338
>UNIPROTKB|F1S0X0 [details] [associations]
symbol:LAMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:FP236754 EMBL:CU407178 Ensembl:ENSSSCT00000006279
Uniprot:F1S0X0
Length = 1583
Score = 793 (284.2 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 152/300 (50%), Positives = 196/300 (65%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCY----EDTHPV 59
RC+P FENAAF E+++TCG+ P P FC G C C E H
Sbjct: 40 RCLPVFENAAFGRLAEASHTCGH----P-PEDFCPHVGAQGAGAQCQRCDAADPERHHNA 94
Query: 60 RYLTDL--SNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
YLTD + +TWWQS +M GVQ+P VNITL+ GK +++TYVRL F + RPESFAIY
Sbjct: 95 SYLTDFHSQDDSTWWQSPSMAFGVQYPTSVNITLRLGKAYEITYVRLKFHTSRPESFAIY 154
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K++ W P+Q+YSASC++TYG + + + + FCTSE+SD+SPL+GG V F+
Sbjct: 155 KRSRAGGPWEPYQYYSASCRKTYGKAEGQYLRPGEDERAAFCTSEFSDISPLSGGNVAFS 214
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQE+VT+TE+ I+LDRLNTF D++F DP VL+SY+YA++D SVG
Sbjct: 215 TLEGRPSAYNFEESPVLQEWVTSTELLISLDRLNTFGDDIFKDPKVLQSYYYAVSDFSVG 274
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDA-NEC 296
RCKCNGHASEC D + CRC+HNT GPDC C PF+ D PW R + +A NEC
Sbjct: 275 GRCKCNGHASECG----PDEEGQLACRCQHNTTGPDCERCLPFFQDRPWARGTAEAANEC 330
>UNIPROTKB|F1N0T1 [details] [associations]
symbol:Bt.54919 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0014002 GO:GO:0000904
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:QRGRRCE EMBL:DAAA02032247
EMBL:DAAA02032248 EMBL:DAAA02032249 EMBL:DAAA02032250
EMBL:DAAA02032251 EMBL:DAAA02032252 EMBL:DAAA02032253
EMBL:DAAA02032254 IPI:IPI00698418 Ensembl:ENSBTAT00000023245
Uniprot:F1N0T1
Length = 1585
Score = 786 (281.7 bits), Expect = 5.9e-77, P = 5.9e-77
Identities = 153/301 (50%), Positives = 195/301 (64%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVR--- 60
RC+P FENAAF E+++TCG P P FC G C C + P R
Sbjct: 47 RCLPVFENAAFGRLAEASHTCGR----P-PEDFCPHVGAQGAGAPCQRC-DAADPARHHN 100
Query: 61 --YLTDL--SNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
YLTD + +TWWQS +M GVQ+P VNITL GK +++TYVRL F + RPESFAI
Sbjct: 101 ASYLTDFHSQDDSTWWQSPSMAFGVQYPTSVNITLNLGKAYEITYVRLKFHTSRPESFAI 160
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK++ W P+Q+YSASCQ+TYG P+ + + + FCTSE+SD+SPL+GG V F
Sbjct: 161 YKRSRAGGPWEPYQYYSASCQKTYGRPEGLFLRPGEDERVAFCTSEFSDISPLSGGNVAF 220
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISV 236
+TLEGR A F + LQE+VT+TE+ ++LDRLNTF D++F DP VL+SY+YA++D SV
Sbjct: 221 STLEGRPSAYNFEESPVLQEWVTSTELLVSLDRLNTFGDDIFKDPKVLQSYYYAVSDFSV 280
Query: 237 GARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDA-NE 295
G RCKCNGHASEC D R CRC+HNT G DC C PF+ D PW R + +A NE
Sbjct: 281 GGRCKCNGHASECG----PDEEGRLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAANE 336
Query: 296 C 296
C
Sbjct: 337 C 337
>UNIPROTKB|Q9Y6N6 [details] [associations]
symbol:LAMC3 "Laminin subunit gamma-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0000904
"cell morphogenesis involved in differentiation" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=TAS] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0016020 "membrane" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS]
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0016020
GO:GO:0005198 GO:GO:0007601 GO:GO:0005578 GO:GO:0007155
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 eggNOG:NOG235720 HOGENOM:HOG000019301
HOVERGEN:HBG100808 EMBL:AF041835 EMBL:AL583807 EMBL:AL355872
EMBL:AB208887 IPI:IPI00914899 RefSeq:NP_006050.3 UniGene:Hs.201805
ProteinModelPortal:Q9Y6N6 SMR:Q9Y6N6 IntAct:Q9Y6N6
MINT:MINT-7034525 STRING:Q9Y6N6 DMDM:308153586 PaxDb:Q9Y6N6
PRIDE:Q9Y6N6 DNASU:10319 Ensembl:ENST00000361069 GeneID:10319
KEGG:hsa:10319 UCSC:uc004caa.1 CTD:10319 GeneCards:GC09P133884
H-InvDB:HIX0008477 HGNC:HGNC:6494 MIM:604349 MIM:614115
neXtProt:NX_Q9Y6N6 Orphanet:280640 PharmGKB:PA30282 KO:K06247
OrthoDB:EOG498TZW ChiTaRS:LAMC3 GenomeRNAi:10319 NextBio:39119
ArrayExpress:Q9Y6N6 Bgee:Q9Y6N6 CleanEx:HS_LAMC3
Genevestigator:Q9Y6N6 GermOnline:ENSG00000050555 Uniprot:Q9Y6N6
Length = 1575
Score = 784 (281.0 bits), Expect = 9.4e-77, P = 9.4e-77
Identities = 151/300 (50%), Positives = 197/300 (65%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCY----EDTHPV 59
RC+P FENAAF ++++TCG P P FC G C C + H
Sbjct: 34 RCLPVFENAAFGRLAQASHTCGS----P-PEDFCPHVGAAGAGAHCQRCDAADPQRHHNA 88
Query: 60 RYLTDL--SNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
YLTD + +TWWQS +M GVQ+P VNITL+ GK +++TYVRL F + RPESFAIY
Sbjct: 89 SYLTDFHSQDESTWWQSPSMAFGVQYPTSVNITLRLGKAYEITYVRLKFHTSRPESFAIY 148
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K++ + W P+QFYSASCQ+TYG P+ + + + FCTSE+SD+SPL+GG V F+
Sbjct: 149 KRSRADGPWEPYQFYSASCQKTYGRPEGQYLRPGEDERVAFCTSEFSDISPLSGGNVAFS 208
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQE+VT+TE+ I+LDRLNTF D++F DP VL+SY+YA++D SVG
Sbjct: 209 TLEGRPSAYNFEESPGLQEWVTSTELLISLDRLNTFGDDIFKDPKVLQSYYYAVSDFSVG 268
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDA-NEC 296
RCKCNGHASEC D + + CRC+HNT G DC C PF+ D PW R + +A +EC
Sbjct: 269 GRCKCNGHASECG----PDVAGQLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAAHEC 324
>RGD|1309399 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0007601 "visual perception" evidence=ISO] [GO:0014002
"astrocyte development" evidence=ISO] [GO:0060041 "retina
development in camera-type eye" evidence=ISO] RGD:1309399
GO:GO:0007601 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 OrthoDB:EOG498TZW EMBL:AC105586 IPI:IPI00950417
Ensembl:ENSRNOT00000066978 UCSC:RGD:1309399 ArrayExpress:D3ZYW4
Uniprot:D3ZYW4
Length = 1580
Score = 783 (280.7 bits), Expect = 1.2e-76, P = 1.2e-76
Identities = 151/301 (50%), Positives = 197/301 (65%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVR--- 60
RC+P FENAAF E+++TCG P P FC G C C +D P R
Sbjct: 43 RCLPEFENAAFGRRAEASHTCGQ----P-PEDFCPHVGAPGAGPQCQRC-DDADPRRRHD 96
Query: 61 --YLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
YLTD + +TWWQS +M GVQ+P VN+TL GK +++TYVRL F + RPESFAI
Sbjct: 97 ASYLTDFHSPDDSTWWQSPSMAFGVQYPTSVNLTLHLGKAYEITYVRLKFHTSRPESFAI 156
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK+T+ W P+Q+YSASCQ+TYG P+ + + + + FCTSE+SD+SPL GG V F
Sbjct: 157 YKRTHTGGPWEPYQYYSASCQKTYGHPEGHYLRPGEDERVAFCTSEFSDISPLNGGNVAF 216
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISV 236
+TLEGR A F + LQE+VT+T++ I+LDRLNTF D++F DP VL+SY+YA++D SV
Sbjct: 217 STLEGRPSAYNFEESPVLQEWVTSTDLLISLDRLNTFGDDIFKDPRVLQSYYYAVSDFSV 276
Query: 237 GARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANE 295
G RCKCNGHAS C + + + C C+HNT G DC C PF+ D PW R + +DANE
Sbjct: 277 GGRCKCNGHASACG----PNEAGQLACHCQHNTTGVDCERCLPFFQDRPWARGTAEDANE 332
Query: 296 C 296
C
Sbjct: 333 C 333
>UNIPROTKB|F1NCH8 [details] [associations]
symbol:F1NCH8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA]
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:AADN02026542 EMBL:AADN02026543 IPI:IPI00589777
Ensembl:ENSGALT00000006123 Uniprot:F1NCH8
Length = 1444
Score = 770 (276.1 bits), Expect = 2.2e-75, P = 2.2e-75
Identities = 153/300 (51%), Positives = 195/300 (65%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYC-YEDT---HPV 59
RC+P FENAAF +NTCG P P +C+Q G + C C D H
Sbjct: 34 RCMPVFENAAFGRVPLVSNTCGS----P-PEDYCLQMGARDASQLCQRCDAADPLLHHNA 88
Query: 60 RYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
+LTD + +TWWQS +M G+Q PN VNITL GK++++TYVRL F + RPESFAIY
Sbjct: 89 SFLTDFHSQEESTWWQSQSMAFGIQHPNSVNITLHLGKSYEITYVRLKFHTSRPESFAIY 148
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFA 177
K++ + W PFQFYSASC++TY + +++ FCT E+SD+SPL+GG V F+
Sbjct: 149 KRSRADGPWVPFQFYSASCEKTYRKRQRQYLQPGENEQVAFCTDEFSDISPLSGGNVAFS 208
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
TLEGR A F + LQE+VT T++ I+L+RLNTF D++F DP VL+SY+YAI+D SVG
Sbjct: 209 TLEGRPSAYNFDGSPTLQEWVTVTDLLISLNRLNTFGDDIFKDPKVLQSYYYAISDFSVG 268
Query: 238 ARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDA-NEC 296
RCKCNGHASEC D + R VC CEHNTAG DC C PFY D PW R + +A NEC
Sbjct: 269 GRCKCNGHASECA----PDEAGRLVCVCEHNTAGTDCQHCQPFYQDRPWARGTAEAANEC 324
>ZFIN|ZDB-GENE-990415-169 [details] [associations]
symbol:ntn1a "netrin 1a" species:7955 "Danio rerio"
[GO:0033564 "anterior/posterior axon guidance" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0016525
"negative regulation of angiogenesis" evidence=IMP] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IGI]
InterPro:IPR001134 PROSITE:PS50189 ZFIN:ZDB-GENE-990415-169
GO:GO:0005576 GO:GO:0016358 GO:GO:0001569 GO:GO:0016525
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0048665
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 HOVERGEN:HBG006464 KO:K06843
HOGENOM:HOG000286017 OMA:NCHTCDA GO:GO:0033564 EMBL:BX255899
EMBL:AF002717 EMBL:CU638812 IPI:IPI00500311 RefSeq:NP_571104.1
UniGene:Dr.545 STRING:O42140 Ensembl:ENSDART00000027806
Ensembl:ENSDART00000148565 GeneID:30227 KEGG:dre:30227 CTD:30227
InParanoid:O42140 NextBio:20806684 Uniprot:O42140
Length = 603
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 143/303 (47%), Positives = 190/303 (62%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCV--QSGT--HVTANTCDYCY-EDTHP 58
RCIP F NAAF V +++TCG P+R+CV + G H +TCD + HP
Sbjct: 49 RCIPDFVNAAFGKEVRASSTCG-----KTPSRYCVVTEKGDERHRNCHTCDASDPKKNHP 103
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
YLTDL+N T WQS Y +Q+P V +TL GK F+VTYV L F SPRPES AI
Sbjct: 104 PAYLTDLNNPHNLTCWQSDN-Y--LQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 160
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNS-GKANDSDTRVFCTSEYSDLSPLTGGAVP 175
+K SW PFQ+YS C++ Y P + K N+ + CT ++D+ PL+GG +
Sbjct: 161 FKSMDYGKSWVPFQYYSTQCRKMYNKPSKATITKQNEQEA--ICTDSHTDMHPLSGGLIA 218
Query: 176 FATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADI 234
F+TL+GR A F + LQ++VTAT+I++T RL+TF DE D + R SYFYA++D+
Sbjct: 219 FSTLDGRPSAHDFDNSPVLQDWVTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVSDL 278
Query: 235 SVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DA 293
VG RCKCNGHAS C V+ DG+ VC C+HNTAGP+C+ C PF+ D PW+RA+ +A
Sbjct: 279 QVGGRCKCNGHASRC--VKDRDGNL--VCECKHNTAGPECDRCKPFHYDRPWQRATAREA 334
Query: 294 NEC 296
NEC
Sbjct: 335 NEC 337
>ZFIN|ZDB-GENE-990415-168 [details] [associations]
symbol:ntn1b "netrin 1b" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0016358
"dendrite development" evidence=IGI] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-990415-168 GO:GO:0005576
GO:GO:0016358 GO:GO:2001240 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 HSSP:P02468
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 EMBL:AF017420
IPI:IPI00512636 RefSeq:NP_571073.1 UniGene:Dr.75773
ProteinModelPortal:O42203 STRING:O42203 PRIDE:O42203 GeneID:30192
KEGG:dre:30192 CTD:30192 InParanoid:O42203 NextBio:20806657
ArrayExpress:O42203 Bgee:O42203 Uniprot:O42203
Length = 602
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 141/302 (46%), Positives = 188/302 (62%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFC--VQSGTHVT--ANTCDYCY-EDTHP 58
RCIP F N+AF V ++TCG P P+R C + G + N CD + THP
Sbjct: 49 RCIPDFVNSAFGKDVRVSSTCGS----P-PSRCCRVTEKGEERSRDCNICDATDPKKTHP 103
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
YLTDL+N T WQS Y VQ+P V +TL GK F+VTYV L F SPRPES AI
Sbjct: 104 PAYLTDLNNPHNLTCWQSEN-Y--VQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 160
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
+K +W PFQFYS C++ Y P + ++ CT ++D+ PLTGG + F
Sbjct: 161 FKSMDYGKTWVPFQFYSTQCKKMYNKPS-KAAITKQNEQEAICTDSHTDMQPLTGGLIAF 219
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+I++T +RL+TF DE D + R SYFYA++D+
Sbjct: 220 STLDGRPSAHDFDNSPVLQDWVTATDIKVTFNRLHTFGDENEDDSELARDSYFYAVSDLQ 279
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DAN 294
VG RCKCNGHAS+C V+ +G+ VC C+HNTAGP+C+ C PF+ D PW+RA+ +AN
Sbjct: 280 VGGRCKCNGHASKC--VKDREGNL--VCECKHNTAGPECDRCKPFHYDRPWQRATAREAN 335
Query: 295 EC 296
EC
Sbjct: 336 EC 337
>UNIPROTKB|Q90922 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071944 "cell
periphery" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005578 PROSITE:PS00022 GO:GO:0071944 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:L34549 IPI:IPI00570611 PIR:A54665
RefSeq:NP_990750.1 UniGene:Gga.794 ProteinModelPortal:Q90922
IntAct:Q90922 STRING:Q90922 GeneID:396389 KEGG:gga:396389
eggNOG:NOG237372 HOVERGEN:HBG006464 KO:K06843 NextBio:20816431
Uniprot:Q90922
Length = 606
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 140/306 (45%), Positives = 188/306 (61%)
Query: 1 MDNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCV--QSGTHVTANTCDYCYED--- 55
+ RCIP F N+AF V+ ++TCG P P+R+CV + G +C C
Sbjct: 49 LPRRCIPDFVNSAFGKEVKVSSTCGK----P-PSRYCVVTEKGEE-QVRSCHLCNASDPK 102
Query: 56 -THPVRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPE 112
HP +LTDL+N T WQS + Y VQ+P+ V +TL GK F+VTYV L F SPRPE
Sbjct: 103 RAHPPSFLTDLNNPHNLTCWQSDS-Y--VQYPHNVTLTLSLGKKFEVTYVSLQFCSPRPE 159
Query: 113 SFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
S AIYK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG
Sbjct: 160 SMAIYKSMDYGKTWVPFQFYSTQCRKMYNKPS-RAAITKQNEQEAICTDSHTDVRPLSGG 218
Query: 173 AVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAI 231
+ F+TL+GR A F + LQ++VTAT+I++T RL+TF DE D + R SYFYA+
Sbjct: 219 LIAFSTLDGRPTAHDFDNSPVLQDWVTATDIKVTFSRLHTFGDENEDDSELARDSYFYAV 278
Query: 232 ADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD 291
+D+ VG RCKCNGHAS C VR D + VC C+HNTAGP+C+ C PF+ D PW+RA+
Sbjct: 279 SDLQVGGRCKCNGHASRC--VRDRDDNL--VCDCKHNTAGPECDRCKPFHYDRPWQRATA 334
Query: 292 -DANEC 296
+ANEC
Sbjct: 335 REANEC 340
>UNIPROTKB|F1N0C7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0030517 "negative regulation of axon extension" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
GO:GO:0016337 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 CTD:9423 OMA:NCHTCDA
EMBL:DAAA02048825 EMBL:DAAA02048826 EMBL:DAAA02048827
EMBL:DAAA02048828 EMBL:DAAA02048829 EMBL:DAAA02048830
EMBL:DAAA02048831 IPI:IPI00704401 RefSeq:NP_001179495.1
UniGene:Bt.88333 Ensembl:ENSBTAT00000016103 GeneID:522767
KEGG:bta:522767 NextBio:20873588 Uniprot:F1N0C7
Length = 603
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 140/302 (46%), Positives = 182/302 (60%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCY----EDTHP 58
RCIP F NAAF V ++TCG P P R+CV S +C C + HP
Sbjct: 49 RCIPDFVNAAFGKDVRVSSTCGR----P-PARYCVVSERGEERLRSCHLCNASDPKKAHP 103
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+LTDL+N T WQS Y +Q+P+ V +TL GK F+VTYV L F SPRPES AI
Sbjct: 104 PAFLTDLNNPHNLTCWQSEN-Y--LQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 160
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG + F
Sbjct: 161 YKSMDYGRTWVPFQFYSTQCRKMYNRPH-RAPITKQNEQEAVCTDSHTDMRPLSGGLIAF 219
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+IR+ RL+TF DE D + R SYFYA++D+
Sbjct: 220 STLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQ 279
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DAN 294
VG RCKCNGHA+ C VR D S VC C HNTAGP+C+ C PF+ D PW+RA+ +AN
Sbjct: 280 VGGRCKCNGHAARC--VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQRATAREAN 335
Query: 295 EC 296
EC
Sbjct: 336 EC 337
>UNIPROTKB|F1PSP7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:NCHTCDA EMBL:AAEX03003649
EMBL:AAEX03003650 EMBL:AAEX03003651 EMBL:AAEX03003652
EMBL:AAEX03003653 Ensembl:ENSCAFT00000027581 Uniprot:F1PSP7
Length = 603
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 140/302 (46%), Positives = 182/302 (60%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCY----EDTHP 58
RCIP F NAAF V ++TCG P P R+CV S +C C + HP
Sbjct: 50 RCIPDFVNAAFGKDVRVSSTCGR----P-PARYCVVSERGEERLRSCHLCNASDPKKAHP 104
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+LTDL+N T WQS Y +Q+P+ V +TL GK F+VTYV L F SPRPES AI
Sbjct: 105 PAFLTDLNNPHNLTCWQSEN-Y--LQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 161
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG + F
Sbjct: 162 YKSMDYGRTWVPFQFYSTQCRKMYNRPH-RAPITKQNEQEAVCTDSHTDMRPLSGGLIAF 220
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+IR+ RL+TF DE D + R SYFYA++D+
Sbjct: 221 STLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQ 280
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DAN 294
VG RCKCNGHA+ C VR D S VC C HNTAGP+C+ C PF+ D PW+RA+ +AN
Sbjct: 281 VGGRCKCNGHAARC--VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQRATAREAN 336
Query: 295 EC 296
EC
Sbjct: 337 EC 338
>UNIPROTKB|O95631 [details] [associations]
symbol:NTN1 "Netrin-1" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0060603 "mammary
gland duct morphogenesis" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0006915 GO:GO:0007411 GO:GO:0001764
GO:GO:0005576 GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0030334 Reactome:REACT_111155 GO:GO:0016337 PROSITE:PS01186
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
KO:K06843 EMBL:U75586 EMBL:GU727649 EMBL:AC090610 EMBL:AC005695
IPI:IPI00006732 RefSeq:NP_004813.2 UniGene:Hs.660885
ProteinModelPortal:O95631 SMR:O95631 DIP:DIP-46273N IntAct:O95631
STRING:O95631 PhosphoSite:O95631 PaxDb:O95631 PRIDE:O95631
Ensembl:ENST00000173229 Ensembl:ENST00000538852
Ensembl:ENST00000546090 GeneID:9423 KEGG:hsa:9423 UCSC:uc002glw.4
CTD:9423 GeneCards:GC17P008865 H-InvDB:HIX0039241 HGNC:HGNC:8029
MIM:601614 neXtProt:NX_O95631 PharmGKB:PA31813 eggNOG:NOG244580
HOGENOM:HOG000286017 InParanoid:O95631 OMA:NCHTCDA
OrthoDB:EOG4H19V9 PhylomeDB:O95631 ChEMBL:CHEMBL1741307
GenomeRNAi:9423 NextBio:35298 ArrayExpress:O95631 Bgee:O95631
CleanEx:HS_NTN1 Genevestigator:O95631 GermOnline:ENSG00000065320
Uniprot:O95631
Length = 604
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 140/302 (46%), Positives = 182/302 (60%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCY----EDTHP 58
RCIP F NAAF V ++TCG P P R+CV S +C C + HP
Sbjct: 50 RCIPDFVNAAFGKDVRVSSTCGR----P-PARYCVVSERGEERLRSCHLCNASDPKKAHP 104
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+LTDL+N T WQS Y +Q+P+ V +TL GK F+VTYV L F SPRPES AI
Sbjct: 105 PAFLTDLNNPHNLTCWQSEN-Y--LQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 161
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG + F
Sbjct: 162 YKSMDYGRTWVPFQFYSTQCRKMYNRPH-RAPITKQNEQEAVCTDSHTDMRPLSGGLIAF 220
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+IR+ RL+TF DE D + R SYFYA++D+
Sbjct: 221 STLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQ 280
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DAN 294
VG RCKCNGHA+ C VR D S VC C HNTAGP+C+ C PF+ D PW+RA+ +AN
Sbjct: 281 VGGRCKCNGHAARC--VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQRATAREAN 336
Query: 295 EC 296
EC
Sbjct: 337 EC 338
>UNIPROTKB|F1SS89 [details] [associations]
symbol:NTN1 "Netrin-1" species:9823 "Sus scrofa"
[GO:0060603 "mammary gland duct morphogenesis" evidence=IEA]
[GO:0045773 "positive regulation of axon extension" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0030517
"negative regulation of axon extension" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0016337 "cell-cell
adhesion" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
GO:GO:0016337 GO:GO:0045773 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 GO:GO:0005604 GO:GO:0040023 GO:GO:0030517
GO:GO:0060603 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00690000102103 EMBL:CU656027
Ensembl:ENSSSCT00000019582 OMA:PTRATIS Uniprot:F1SS89
Length = 356
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 140/302 (46%), Positives = 182/302 (60%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCY----EDTHP 58
RCIP F NAAF V ++TCG P P R+CV S +C C + HP
Sbjct: 50 RCIPDFVNAAFGKDVRVSSTCGR----P-PARYCVVSERGEERLRSCHLCNASDPKKAHP 104
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+LTDL+N T WQS Y +Q+P+ V +TL GK F+VTYV L F SPRPES AI
Sbjct: 105 PAFLTDLNNPHNLTCWQSEN-Y--LQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 161
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG + F
Sbjct: 162 YKSMDYGRTWVPFQFYSTQCRKMYNRPH-RAPITKQNEQEAVCTDSHTDMRPLSGGLIAF 220
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+IR+ RL+TF DE D + R SYFYA++D+
Sbjct: 221 STLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQ 280
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DAN 294
VG RCKCNGHA+ C VR D S VC C HNTAGP+C+ C PF+ D PW+RA+ +AN
Sbjct: 281 VGGRCKCNGHAARC--VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQRATAREAN 336
Query: 295 EC 296
EC
Sbjct: 337 EC 338
>UNIPROTKB|Q2HXW4 [details] [associations]
symbol:NTN1 "Netrin-1" species:9823 "Sus scrofa"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0006915 GO:GO:0005578 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4H19V9 EMBL:DQ368597
RefSeq:NP_001038013.1 UniGene:Ssc.22870 ProteinModelPortal:Q2HXW4
STRING:Q2HXW4 GeneID:733599 KEGG:ssc:733599 CTD:180961
Uniprot:Q2HXW4
Length = 600
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 140/302 (46%), Positives = 182/302 (60%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCY----EDTHP 58
RCIP F NAAF V ++TCG P P R+CV S +C C + HP
Sbjct: 50 RCIPDFVNAAFGKDVRVSSTCGR----P-PARYCVVSERGEERLRSCHLCNASDPKKAHP 104
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+LTDL+N T WQS Y +Q+P+ V +TL GK F+VTYV L F SPRPES AI
Sbjct: 105 PAFLTDLNNPHNLTCWQSEN-Y--LQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 161
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG + F
Sbjct: 162 YKSMDYGRTWVPFQFYSTQCRKMYNRPH-RAPITKQNEQEAVCTDSHTDMRPLSGGLIAF 220
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+IR+ RL+TF DE D + R SYFYA++D+
Sbjct: 221 STLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQ 280
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DAN 294
VG RCKCNGHA+ C VR D S VC C HNTAGP+C+ C PF+ D PW+RA+ +AN
Sbjct: 281 VGGRCKCNGHAARC--VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQRATAREAN 336
Query: 295 EC 296
EC
Sbjct: 337 EC 338
>UNIPROTKB|F1PHK9 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043259 "laminin-10 complex" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] GO:GO:0016477 GO:GO:0006461
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AAEX03005149 EMBL:AAEX03005150 Ensembl:ENSCAFT00000020993
Uniprot:F1PHK9
Length = 1487
Score = 671 (241.3 bits), Expect = 1.0e-64, P = 1.0e-64
Identities = 124/221 (56%), Positives = 158/221 (71%)
Query: 77 MYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASC 136
M GVQ+PN +N+TL GK FD+TYVRL F + RPESFAIYK+T E W P+Q+YS SC
Sbjct: 1 MLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREGGPWIPYQYYSGSC 60
Query: 137 QETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQE 196
+ TY + + + + CT E+SD+SPLTGG V F+TLEGR A F + LQE
Sbjct: 61 ENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQE 120
Query: 197 FVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSD 256
+VTAT+IR+TL+RLNTF DE+F DP VL+SY+YAI+D +VG RCKCNGHASEC + D
Sbjct: 121 WVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASEC-VKNEFD 179
Query: 257 GSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANEC 296
+ VC C+HNT G DC +C PF+ND PWRRA+ + A+EC
Sbjct: 180 ---KLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASEC 217
>MGI|MGI:105088 [details] [associations]
symbol:Ntn1 "netrin 1" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;IMP] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IMP;IDA] [GO:0030517 "negative regulation of
axon extension" evidence=IDA] [GO:0030879 "mammary gland
development" evidence=IGI] [GO:0033564 "anterior/posterior axon
guidance" evidence=IMP] [GO:0040023 "establishment of nucleus
localization" evidence=IDA] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0045773 "positive regulation of axon extension"
evidence=IDA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IGI] [GO:0071944 "cell periphery" evidence=ISO]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:105088 GO:GO:0005737
GO:GO:0006915 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 GO:GO:0042472 GO:GO:0071944 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 EMBL:CH466601 GO:GO:0030517 Reactome:REACT_137402
SMART:SM00643 GO:GO:0060603 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00690000102103
HOVERGEN:HBG006464 KO:K06843 CTD:9423 eggNOG:NOG244580
HOGENOM:HOG000286017 OMA:NCHTCDA OrthoDB:EOG4H19V9 EMBL:U65418
EMBL:AF128865 EMBL:AL669842 EMBL:AL606831 EMBL:AL662894
EMBL:BC141294 EMBL:U23505 IPI:IPI00114257 RefSeq:NP_032770.2
UniGene:Mm.39095 ProteinModelPortal:O09118 SMR:O09118 IntAct:O09118
STRING:O09118 PhosphoSite:O09118 PRIDE:O09118
Ensembl:ENSMUST00000021284 Ensembl:ENSMUST00000108674 GeneID:18208
KEGG:mmu:18208 InParanoid:B1ARR0 NextBio:293590 Bgee:O09118
CleanEx:MM_NTN1 Genevestigator:O09118 GermOnline:ENSMUSG00000020902
Uniprot:O09118
Length = 604
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 139/302 (46%), Positives = 181/302 (59%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCYED----THP 58
RCIP F NAAF V ++TCG P P R+CV S +C C HP
Sbjct: 50 RCIPDFVNAAFGKDVRVSSTCGR----P-PARYCVVSERGEERLRSCHLCNSSDPKKAHP 104
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+LTDL+N T WQS Y +Q+P+ V +TL GK F+VTYV L F SPRPES AI
Sbjct: 105 PAFLTDLNNPHNLTCWQSEN-Y--LQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 161
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG + F
Sbjct: 162 YKSMDYGRTWVPFQFYSTQCRKMYNRPH-RAPITKQNEQEAVCTDSHTDMRPLSGGLIAF 220
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+IR+ RL+TF DE D + R SY+YA++D+
Sbjct: 221 STLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYYYAVSDLQ 280
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DAN 294
VG RCKCNGHA+ C VR D S VC C HNTAGP+C+ C PF+ D PW+RA+ +AN
Sbjct: 281 VGGRCKCNGHAARC--VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQRATAREAN 336
Query: 295 EC 296
EC
Sbjct: 337 EC 338
>RGD|619809 [details] [associations]
symbol:Ntn1 "netrin 1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=ISO] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007411 "axon guidance" evidence=ISO;NAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016337 "cell-cell adhesion" evidence=ISO]
[GO:0030334 "regulation of cell migration" evidence=ISO]
[GO:0030517 "negative regulation of axon extension" evidence=ISO]
[GO:0030879 "mammary gland development" evidence=ISO] [GO:0033564
"anterior/posterior axon guidance" evidence=ISO] [GO:0040023
"establishment of nucleus localization" evidence=ISO] [GO:0042472
"inner ear morphogenesis" evidence=ISO] [GO:0045773 "positive
regulation of axon extension" evidence=ISO] [GO:0060603 "mammary
gland duct morphogenesis" evidence=ISO] InterPro:IPR001134
PROSITE:PS50189 RGD:619809 GO:GO:0005737 GO:GO:0006915
GO:GO:0007411 GO:GO:0001764 GO:GO:0008284 GO:GO:0005578
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 HSSP:P02468 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOVERGEN:HBG006464 CTD:9423 eggNOG:NOG244580 HOGENOM:HOG000286017
OrthoDB:EOG4H19V9 EMBL:AY028417 IPI:IPI00205229 UniGene:Rn.41052
ProteinModelPortal:Q924Z9 IntAct:Q924Z9 STRING:Q924Z9 PRIDE:Q924Z9
UCSC:RGD:619809 InParanoid:Q924Z9 NextBio:618675
ArrayExpress:Q924Z9 Genevestigator:Q924Z9 Uniprot:Q924Z9
Length = 604
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 139/302 (46%), Positives = 181/302 (59%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCYED----THP 58
RCIP F NAAF V ++TCG P P R+CV S +C C HP
Sbjct: 50 RCIPDFVNAAFGKDVRVSSTCGR----P-PARYCVVSERGEERLRSCHLCNSSDPKKAHP 104
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+LTDL+N T WQS Y +Q+P+ V +TL GK F+VTYV L F SPRPES AI
Sbjct: 105 PAFLTDLNNPHNLTCWQSEN-Y--LQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 161
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG + F
Sbjct: 162 YKSMDYGRTWVPFQFYSTQCRKMYNRPH-RAPITKQNEQEAVCTDSHTDMRPLSGGLIAF 220
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+IR+ RL+TF DE D + R SY+YA++D+
Sbjct: 221 STLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYYYAVSDLQ 280
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DAN 294
VG RCKCNGHA+ C VR D S VC C HNTAGP+C+ C PF+ D PW+RA+ +AN
Sbjct: 281 VGGRCKCNGHAARC--VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQRATAREAN 336
Query: 295 EC 296
EC
Sbjct: 337 EC 338
>UNIPROTKB|F1LPC8 [details] [associations]
symbol:Ntn1 "Netrin-1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0040023 "establishment of nucleus
localization" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 RGD:619809
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0016337
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 OMA:NCHTCDA IPI:IPI00205229
RefSeq:NP_446183.2 Ensembl:ENSRNOT00000005255 GeneID:114523
KEGG:rno:114523 ArrayExpress:F1LPC8 Uniprot:F1LPC8
Length = 604
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 139/302 (46%), Positives = 181/302 (59%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCYED----THP 58
RCIP F NAAF V ++TCG P P R+CV S +C C HP
Sbjct: 50 RCIPDFVNAAFGKDVRVSSTCGR----P-PARYCVVSERGEERLRSCHLCNSSDPKKAHP 104
Query: 59 VRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAI 116
+LTDL+N T WQS Y +Q+P+ V +TL GK F+VTYV L F SPRPES AI
Sbjct: 105 PAFLTDLNNPHNLTCWQSEN-Y--LQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI 161
Query: 117 YKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
YK +W PFQFYS C++ Y P + ++ CT ++D+ PL+GG + F
Sbjct: 162 YKSMDYGRTWVPFQFYSTQCRKMYNRPH-RAPITKQNEQEAVCTDSHTDMRPLSGGLIAF 220
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLR-SYFYAIADIS 235
+TL+GR A F + LQ++VTAT+IR+ RL+TF DE D + R SY+YA++D+
Sbjct: 221 STLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYYYAVSDLQ 280
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DAN 294
VG RCKCNGHA+ C VR D S VC C HNTAGP+C+ C PF+ D PW+RA+ +AN
Sbjct: 281 VGGRCKCNGHAARC--VRDRDDSL--VCDCRHNTAGPECDRCKPFHYDRPWQRATAREAN 336
Query: 295 EC 296
EC
Sbjct: 337 EC 338
>UNIPROTKB|Q90923 [details] [associations]
symbol:NTN3 "Netrin-3" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007520 "myoblast fusion"
evidence=IDA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0006355 GO:GO:0005578 PROSITE:PS00022 GO:GO:0007520
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 EMBL:L34550 IPI:IPI00581364 PIR:B54665
UniGene:Gga.792 ProteinModelPortal:Q90923 STRING:Q90923
InParanoid:Q90923 OrthoDB:EOG4VHK67 Uniprot:Q90923
Length = 581
Score = 522 (188.8 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 108/250 (43%), Positives = 152/250 (60%)
Query: 57 HPVRYLTDLSNTT--TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESF 114
HP YLTDL+ T W+S T++ P+ V +TL GK F+V YV L F SPRPES
Sbjct: 75 HPPAYLTDLNTAANMTCWRSETLH---HLPHNVTLTLSLGKKFEVVYVSLQFCSPRPEST 131
Query: 115 AIYKKTYENSSWTPFQFYSASCQETYGLPDDNS-GKANDSDTRVFCTSEYSDLSPLTGGA 173
AI+K +W P+Q+YS+ C++ YG P + K N+ + CT +DL PLTGG
Sbjct: 132 AIFKSMDYGKTWVPYQYYSSQCRKIYGKPSKATVTKQNEQEA--LCTDGLTDLYPLTGGL 189
Query: 174 VPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYD----ELFLDPSVLRS--Y 227
+ F+TL+GR A+ F + LQ++VTAT+IR+ R + F + E + + Y
Sbjct: 190 IAFSTLDGRPSAQDFDSSPVLQDWVTATDIRVVFSRPHLFRELGGREAGEEDGGAGATPY 249
Query: 228 FYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWR 287
+Y++ ++ VG RCKCNGHAS C V+ D + VC C+HNT GP+C+ C PF+ D PW+
Sbjct: 250 YYSVGELQVGGRCKCNGHASRC--VK--DKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQ 305
Query: 288 RASD-DANEC 296
RAS +ANEC
Sbjct: 306 RASAREANEC 315
Score = 104 (41.7 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 30/77 (38%), Positives = 38/77 (49%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLT 63
RCIP F NAAF V++++TCG P PTR C S HP YLT
Sbjct: 38 RCIPEFVNAAFGKEVQASSTCGK----P-PTRHCDASDPR-----------RAHPPAYLT 81
Query: 64 DLSNTT--TWWQSTTMY 78
DL+ T W+S T++
Sbjct: 82 DLNTAANMTCWRSETLH 98
Score = 89 (36.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 240 CKCNGHASECPY----VRQSDGSTRRVC-RCEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
C CN HA C + + S + VC C HNTAG C+ C FY D ++ D
Sbjct: 318 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLS--KSITDR 375
Query: 294 NECR 297
C+
Sbjct: 376 KACK 379
>ZFIN|ZDB-GENE-050310-2 [details] [associations]
symbol:ntn2 "netrin 2" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-2 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 GeneTree:ENSGT00700000104042
OMA:RAHPASY EMBL:FP102170 EMBL:CU929347 EMBL:AY928518
IPI:IPI00628796 RefSeq:NP_001032492.1 UniGene:Dr.153063
Ensembl:ENSDART00000112318 GeneID:641469 KEGG:dre:641469 CTD:641469
NextBio:20901575 Uniprot:Q32SK9
Length = 600
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 129/312 (41%), Positives = 175/312 (56%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQP-TRFC--VQSGTHVTANTCDYCY----EDT 56
RCIP F NAAF V ++ CG +P +R C V+ TC C +
Sbjct: 35 RCIPEFINAAFGQEVSVSSVCG------RPVSRSCSLVERDDRPAVRTCQICDASDPRNA 88
Query: 57 HPVRYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESF 114
HP YLTDL++ T WQS + P V +TL GK F++TYV L F SPRPES
Sbjct: 89 HPASYLTDLNSAHNLTCWQSENLQSS---PLNVTLTLSLGKKFEITYVSLQFCSPRPESL 145
Query: 115 AIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
AIYK +WTP+QFYS+ C+ Y P+ + ++ CT ++DL PL+GG +
Sbjct: 146 AIYKSMDYGRTWTPYQFYSSQCRRMYNRPN-KAAITKQNEQEALCTDGHTDLYPLSGGLI 204
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDR--------LNTFYDELFLD-PSVLR 225
F+TL+GR K F + LQ++VT T+IR+ R ++ E L P L
Sbjct: 205 AFSTLDGRPSGKDFDSSPVLQDWVTVTDIRVVFSRPQHTRALPMSGRESEDALGAPGSLP 264
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAP 285
+Y+YA+ D VG RCKCNGHAS C VR+ DG + +C C+HNT GP+C+ C PF+ D P
Sbjct: 265 TYYYAVGDFQVGGRCKCNGHASRC--VREKDG--KLLCECKHNTEGPECDRCKPFHYDRP 320
Query: 286 WRRASD-DANEC 296
W+RA+ +ANEC
Sbjct: 321 WQRATGKEANEC 332
>FB|FBgn0015774 [details] [associations]
symbol:NetB "Netrin-B" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0016200
"synaptic target attraction" evidence=TAS] [GO:0007411 "axon
guidance" evidence=IGI;ISS;NAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISS] [GO:0070983 "dendrite guidance"
evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0008039 "synaptic target recognition"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 GO:GO:0007432 SMART:SM00643
GO:GO:0016200 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG244580 GeneTree:ENSGT00700000104042
GO:GO:2000289 EMBL:U60317 EMBL:U63737 RefSeq:NP_001162753.1
RefSeq:NP_001162754.1 RefSeq:NP_001162755.1 RefSeq:NP_001245668.1
RefSeq:NP_001245669.1 RefSeq:NP_511155.1 UniGene:Dm.3913
ProteinModelPortal:Q24568 SMR:Q24568 MINT:MINT-1334555
STRING:Q24568 PRIDE:Q24568 EnsemblMetazoa:FBtr0073940
EnsemblMetazoa:FBtr0302016 EnsemblMetazoa:FBtr0302017
EnsemblMetazoa:FBtr0302018 EnsemblMetazoa:FBtr0304874
EnsemblMetazoa:FBtr0304875 GeneID:32400 KEGG:dme:Dmel_CG10521
CTD:32400 FlyBase:FBgn0015774 InParanoid:Q24568 OMA:NECKMCQ
OrthoDB:EOG43R22P PhylomeDB:Q24568 GenomeRNAi:32400 NextBio:778273
Bgee:Q24568 GermOnline:CG10521 Uniprot:Q24568
Length = 793
Score = 334 (122.6 bits), Expect = 2.5e-51, Sum P(3) = 2.5e-51
Identities = 85/221 (38%), Positives = 122/221 (55%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFC--VQSGTHVTANTCDYCYEDTHPVRY 61
+C+P F NAA+ V++++ CG Q QP R+C ++ G A C C + +
Sbjct: 42 KCLPSFVNAAYGNPVQASSVCGAQ----QPERYCELLRDGN---AGECRSCEQQRYGPAA 94
Query: 62 LTDLSNTT--TWWQSTTM---YDGVQWP-NQVNITLKFGKTFDVTYVRLLFW--SPRPES 113
LTDL+N + T W+S + +D P + V +TL GK +++TY+ L F SPRP+S
Sbjct: 95 LTDLNNPSNVTCWRSGAVNVPHDPDSAPPDNVTLTLSLGKKYELTYISLSFCPRSPRPDS 154
Query: 114 FAIYKKTYENSSWTPFQFYSASCQETYGLPDDNS-GKANDSDTRVFCTSEYSDLSPLTGG 172
AI+K + +W PFQFYS+ CQ+ YG PD K N+ + R C + D TGG
Sbjct: 155 LAIFKSSDFGQTWQPFQFYSSQCQKFYGRPDRAKISKFNEQEAR--CINSQHD----TGG 208
Query: 173 AVP---FATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRL 210
A F TLEGR A +L LQ++VTAT+IR+ RL
Sbjct: 209 AAQRFAFNTLEGRPSANDLDSSLVLQDWVTATDIRVVFHRL 249
Score = 151 (58.2 bits), Expect = 2.5e-51, Sum P(3) = 2.5e-51
Identities = 25/45 (55%), Positives = 29/45 (64%)
Query: 254 QSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
Q C C+HNTAGP+C C PFY D PW RA+D DANEC+
Sbjct: 452 QMSAKLTMTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECK 496
Score = 105 (42.0 bits), Expect = 2.5e-51, Sum P(3) = 2.5e-51
Identities = 20/33 (60%), Positives = 23/33 (69%)
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGS 258
S YA++D +VG RCKCNGHASEC S GS
Sbjct: 391 SQHYAVSDFAVGGRCKCNGHASEC-VATVSSGS 422
Score = 88 (36.0 bits), Expect = 7.3e-36, Sum P(2) = 7.3e-36
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 240 CKCNGHASECPY----VRQSDGSTRRVC-RCEHNTAGPDCNECAP-FYNDA 284
C+CNGHA C + + S + VC C+H+T G C+ C +Y DA
Sbjct: 498 CQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDA 548
Score = 52 (23.4 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 13/43 (30%), Positives = 15/43 (34%)
Query: 239 RCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFY 281
RC C+ S G C C+ G CN CA Y
Sbjct: 560 RCDCHPVGSTGKTCNHLSGQ----CPCKEGVTGLTCNRCARGY 598
>WB|WBGene00006746 [details] [associations]
symbol:unc-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0008078 "mesodermal cell migration" evidence=IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0030334
"regulation of cell migration" evidence=IGI;IMP] [GO:0035262 "gonad
morphogenesis" evidence=IGI;IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] [GO:0005102
"receptor binding" evidence=ISS] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] Reactome:REACT_86739 InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0030424 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045
GO:GO:0030163 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759
GO:GO:0035262 SMART:SM00643 GO:GO:0033563 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 KO:K06843
eggNOG:NOG244580 HOGENOM:HOG000286017 CTD:180961
GeneTree:ENSGT00700000104042 EMBL:M80241 EMBL:FO080932 PIR:JH0799
RefSeq:NP_509165.1 ProteinModelPortal:P34710 SMR:P34710
DIP:DIP-24693N MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 120/315 (38%), Positives = 172/315 (54%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFC-VQSGTH-VTANTCDYC----YEDTH 57
RC+P F NAAF V +++TCG +P ++C V+ G + CD C + +H
Sbjct: 46 RCVPEFINAAFGKPVIASDTCGTN----RPDKYCTVKEGPDGIIREQCDTCDARNHFQSH 101
Query: 58 PVRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFA 115
P LTDL++ T W ST P V++TL GK F++TYV + F S P+S A
Sbjct: 102 PASLLTDLNSIGNMTCWVSTPSLS----PQNVSLTLSLGKKFELTYVSMHFCSRLPDSMA 157
Query: 116 IYKKTYENSSWTPFQFYSASCQETYGL-PDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+YK +WTPFQFYS+ C+ +G PD + K+N+ + CT+ + + P G V
Sbjct: 158 LYKSADFGKTWTPFQFYSSECRRIFGRDPDVSITKSNEQEA--VCTASHI-MGP-GGNRV 213
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF------------LDPS 222
F LE R A+ F + LQ++VTAT+I++ RL+ EL+ D
Sbjct: 214 AFPFLENRPSAQNFENSPVLQDWVTATDIKVVFSRLSPDQAELYGLSNDVNSYGNETDDE 273
Query: 223 VLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYN 282
V + YFY++ +++VG RCKCNGHAS C + D R C C+HNTAG +C C PF+
Sbjct: 274 VKQRYFYSMGELAVGGRCKCNGHASRCIF----DKMGRYTCDCKHNTAGTECEMCKPFHY 329
Query: 283 DAPWRRAS-DDANEC 296
D PW RA+ + AN C
Sbjct: 330 DRPWGRATANSANSC 344
>UNIPROTKB|P34710 [details] [associations]
symbol:unc-6 "Netrin unc-6" species:6239 "Caenorhabditis
elegans" [GO:0005576 "extracellular region" evidence=TAS]
Reactome:REACT_86739 InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005737 GO:GO:0030424 GO:GO:0005102 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045 GO:GO:0030163
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759 GO:GO:0035262
SMART:SM00643 GO:GO:0033563 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 CTD:180961 GeneTree:ENSGT00700000104042
EMBL:M80241 EMBL:FO080932 PIR:JH0799 RefSeq:NP_509165.1
ProteinModelPortal:P34710 SMR:P34710 DIP:DIP-24693N
MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 120/315 (38%), Positives = 172/315 (54%)
Query: 4 RCIPPFENAAFSASVESTNTCGYQNGVPQPTRFC-VQSGTH-VTANTCDYC----YEDTH 57
RC+P F NAAF V +++TCG +P ++C V+ G + CD C + +H
Sbjct: 46 RCVPEFINAAFGKPVIASDTCGTN----RPDKYCTVKEGPDGIIREQCDTCDARNHFQSH 101
Query: 58 PVRYLTDLSN--TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFA 115
P LTDL++ T W ST P V++TL GK F++TYV + F S P+S A
Sbjct: 102 PASLLTDLNSIGNMTCWVSTPSLS----PQNVSLTLSLGKKFELTYVSMHFCSRLPDSMA 157
Query: 116 IYKKTYENSSWTPFQFYSASCQETYGL-PDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+YK +WTPFQFYS+ C+ +G PD + K+N+ + CT+ + + P G V
Sbjct: 158 LYKSADFGKTWTPFQFYSSECRRIFGRDPDVSITKSNEQEA--VCTASHI-MGP-GGNRV 213
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF------------LDPS 222
F LE R A+ F + LQ++VTAT+I++ RL+ EL+ D
Sbjct: 214 AFPFLENRPSAQNFENSPVLQDWVTATDIKVVFSRLSPDQAELYGLSNDVNSYGNETDDE 273
Query: 223 VLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYN 282
V + YFY++ +++VG RCKCNGHAS C + D R C C+HNTAG +C C PF+
Sbjct: 274 VKQRYFYSMGELAVGGRCKCNGHASRCIF----DKMGRYTCDCKHNTAGTECEMCKPFHY 329
Query: 283 DAPWRRAS-DDANEC 296
D PW RA+ + AN C
Sbjct: 330 DRPWGRATANSANSC 344
>FB|FBgn0015773 [details] [associations]
symbol:NetA "Netrin-A" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0007411
"axon guidance" evidence=IGI;ISS;NAS] [GO:0070983 "dendrite
guidance" evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 eggNOG:NOG244580
GeneTree:ENSGT00700000104042 EMBL:U60316 EMBL:U63736 EMBL:AY089580
RefSeq:NP_001245667.1 RefSeq:NP_511154.3 UniGene:Dm.2915
ProteinModelPortal:Q24567 SMR:Q24567 IntAct:Q24567 MINT:MINT-285237
STRING:Q24567 EnsemblMetazoa:FBtr0073942 GeneID:32398
KEGG:dme:Dmel_CG18657 CTD:32398 FlyBase:FBgn0015773
InParanoid:Q24567 OMA:AIMAKVI OrthoDB:EOG470RZN PhylomeDB:Q24567
GenomeRNAi:32398 NextBio:778263 Bgee:Q24567 GermOnline:CG18657
GO:GO:2000289 Uniprot:Q24567
Length = 726
Score = 317 (116.6 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 82/213 (38%), Positives = 118/213 (55%)
Query: 5 CIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYE-DTHPVRYLT 63
CIP F NAA+ A V +++TCG +G R+C + +TCD + P R LT
Sbjct: 50 CIPDFVNAAYDAPVVASSTCG-SSGAQ---RYCEYQDHERSCHTCDMTDPLRSFPARSLT 105
Query: 64 DL--SNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYV--RLLFWSPRPESFAIYKK 119
DL SN T W+S + + V +TL GK F++TYV +L +PRP+S IYK
Sbjct: 106 DLNNSNNVTCWRSEPVTGS---GDNVTLTLSLGKKFELTYVILQLCPHAPRPDSMVIYKS 162
Query: 120 TYENSSWTPFQFYSASCQETYGLPDDNS-GKANDSDTRVFCTSEYSDLS-PLTGGAVPFA 177
T SW PFQF+S+ C+ +G P S G+ N+ + R C SD++ PL + F+
Sbjct: 163 TDHGLSWQPFQFFSSQCRRLFGRPARQSTGRHNEHEAR--C----SDVTRPLVS-RIAFS 215
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRL 210
TLEGR ++ + LQ++VTAT+IR+ RL
Sbjct: 216 TLEGRPSSRDLDSSPVLQDWVTATDIRVVFHRL 248
Score = 222 (83.2 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 40/70 (57%), Positives = 48/70 (68%)
Query: 229 YAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRR 288
YAI+D SVG RCKCNGHAS+C +D S + C C HNTAG DC C PF+ D PW R
Sbjct: 302 YAISDFSVGGRCKCNGHASKC----STDASGQLNCECSHNTAGRDCERCKPFHFDRPWAR 357
Query: 289 AS-DDANECR 297
A+ +ANEC+
Sbjct: 358 ATAKEANECK 367
Score = 103 (41.3 bits), Expect = 9.0e-36, Sum P(2) = 9.0e-36
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 240 CKCNGHASECPY----VRQSDGSTRRVCR-CEHNTAGPDCNECAP-FYNDA 284
C CN HA +C + R S G + VC+ C H+T G +C++C FY DA
Sbjct: 369 CNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDA 419
Score = 56 (24.8 bits), Expect = 7.6e-31, Sum P(2) = 7.6e-31
Identities = 18/60 (30%), Positives = 23/60 (38%)
Query: 228 FYAIADISVGARCKCNGHASECPYVRQSD---GSTRRVCRCEHNTAGPDCNECAPFYNDA 284
FY A + R C A +C + S ST C C+ G CN CA Y +
Sbjct: 415 FYRDATKPLTHRKVCK--ACDCHPIGSSGKICNSTSGQCPCKDGVTGLTCNRCARGYQQS 472
>UNIPROTKB|F1NQ51 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:AADN02021360
EMBL:AADN02021358 EMBL:AADN02021359 IPI:IPI00597868
Ensembl:ENSGALT00000024287 Uniprot:F1NQ51
Length = 3356
Score = 496 (179.7 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 110/311 (35%), Positives = 164/311 (52%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFC--------VQSGTHVTANTCDYCY----E 54
PP+ N A +A + +T TCG + G +P +C G + CDYC
Sbjct: 49 PPYFNLAETAGISATATCGEEEGGGRPELYCKLVGGPAAAPLGRAIQGQFCDYCNAGDPS 108
Query: 55 DTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPES 113
HP+ D T WWQS + G+++ N+VN+TL G+ F V Y+ + F SPRP+
Sbjct: 109 KAHPITNAID--GTERWWQSPPLSKGLKY-NEVNVTLDLGQLFHVAYILIKFANSPRPDL 165
Query: 114 FAIYKKTYENSSWTPFQFYS---ASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLT 170
+ + + ++TP+Q+++ A C E +G + N DSD V CT+EYS + PL
Sbjct: 166 WILERSVDFGRTYTPWQYFAHSKADCLERFG-KEANVPVRRDSD--VICTTEYSRIVPLE 222
Query: 171 GGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL----DPSVLRS 226
G + + + GR AK F+Y+ +L+EF AT IR+ R NT L DP+V R
Sbjct: 223 NGEIVVSLVNGRPGAKNFTYSPSLREFTKATNIRLHFLRTNTLLGHLISKAQRDPTVTRR 282
Query: 227 YFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPW 286
Y+Y+I DIS+G RC C+GHA C + ++ + C C+HNT G C+ C P YN W
Sbjct: 283 YYYSIKDISIGGRCVCHGHAEVCN-AKSAENQYQFHCECQHNTCGETCDRCCPGYNQKQW 341
Query: 287 RRAS-DDANEC 296
+ A+ + N C
Sbjct: 342 QPATAGNINIC 352
>MGI|MGI:99909 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005608 "laminin-3 complex" evidence=ISO] [GO:0005610
"laminin-5 complex" evidence=IDA] [GO:0005913 "cell-cell adherens
junction" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0030056
"hemidesmosome" evidence=ISO] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031581 "hemidesmosome assembly" evidence=ISO]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:99909 GO:GO:0030155 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOVERGEN:HBG052300 GO:GO:0005610 EMBL:AJ293592
EMBL:U88353 EMBL:X84014 EMBL:X84013 EMBL:L20478 IPI:IPI00125058
IPI:IPI00988354 UniGene:Mm.42012 ProteinModelPortal:Q61789
SMR:Q61789 STRING:Q61789 PhosphoSite:Q61789 PaxDb:Q61789
PRIDE:Q61789 UCSC:uc008ecf.2 UCSC:uc008ech.1 HOGENOM:HOG000048708
CleanEx:MM_LAMA3 Genevestigator:Q61789
GermOnline:ENSMUSG00000024421 Uniprot:Q61789
Length = 3333
Score = 489 (177.2 bits), Expect = 9.0e-45, P = 9.0e-45
Identities = 116/322 (36%), Positives = 169/322 (52%)
Query: 1 MDNRCI-PPFENAAFSASVESTNTCGYQN---GVPQPTRFC-------VQSGTH-VTANT 48
M +R + PP+ N A +A + +T TCG ++ P+P FC Q H +
Sbjct: 39 MSSRSLHPPYFNLAQAARIWATATCGERDPEVSRPRPELFCKLVGGPAAQGSGHTIQGQF 98
Query: 49 CDYCY-EDT---HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRL 104
CDYC ED+ HP + D S WWQS + G Q+ NQVN+TL G+ F V Y+ +
Sbjct: 99 CDYCNSEDSRKAHPASHAIDGSER--WWQSPPLSSGTQY-NQVNLTLDLGQLFHVAYILI 155
Query: 105 LFW-SPRPESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCT 160
F SPRP+ + + + S+++P+Q+++ S C E +G + A D ++ C
Sbjct: 156 KFANSPRPDLWILERSVDFGSTYSPWQYFAHSRRDCVEQFG---QEANMAITQDDQMLCV 212
Query: 161 SEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL- 219
+EYS + PL G + + + GR AK F+++ L+EF AT IR+ R NT L
Sbjct: 213 TEYSRIVPLENGEIVVSLINGRPGAKKFAFSDTLREFTKATNIRLRFLRTNTLLGHLISK 272
Query: 220 ---DPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCN 275
DP+V R Y+Y+I DISVG RC CNGHA C +D ++ C C+H+T G CN
Sbjct: 273 AERDPTVTRRYYYSIKDISVGGRCVCNGHAEAC----SADNPEKQFRCECQHHTCGDTCN 328
Query: 276 ECAPFYNDAPWRRASDDA-NEC 296
C YN W+ A + NEC
Sbjct: 329 RCCAGYNQRRWQPAGQEQHNEC 350
>UNIPROTKB|E2RPP1 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 CTD:3909 KO:K06240 OMA:DSCQGCS EMBL:AAEX03005452
RefSeq:XP_537297.2 Ensembl:ENSCAFT00000028869 GeneID:480173
KEGG:cfa:480173 Uniprot:E2RPP1
Length = 3337
Score = 484 (175.4 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 116/316 (36%), Positives = 166/316 (52%)
Query: 7 PPFENAAFSASVESTNTCGYQN--GV---PQPTRFCVQ--------SGTHVTANTCDYCY 53
PP+ N A +A + +T TCG + G P+P +C SG + CDYC
Sbjct: 47 PPYFNLAEAARIWATATCGEREPGGARPRPRPELYCKLVGGPTAPGSGHTIQGQFCDYCN 106
Query: 54 -ED---THPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-S 108
ED HPV D S + WWQS + G Q+ N+VN+TL G+ F V Y+ + F S
Sbjct: 107 SEDPRKAHPVTNAIDGSES--WWQSPPLSSGTQY-NKVNVTLDLGQLFHVAYLIIKFANS 163
Query: 109 PRPESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSD 165
PRP+ + + + S+++P+Q+++ S C E +G + A D V CT+EYS
Sbjct: 164 PRPDLWVLERSVDFGSTYSPWQYFAHSKVDCLEQFG---QKANMAITQDDDVLCTTEYSR 220
Query: 166 LSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL----DP 221
+ PL G V + + GR AK F+++ L+EF AT IR+ R NT L DP
Sbjct: 221 IVPLENGEVVVSLINGRPGAKNFTFSHTLREFTKATNIRLCFLRTNTLLGHLISKAQRDP 280
Query: 222 SVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFY 281
+V R Y+Y+I DIS+G RC CNGHA EC ++ C C+H+T G C+ C Y
Sbjct: 281 TVTRRYYYSIKDISIGGRCVCNGHAQEC---NANNPEKLFQCECQHHTCGKTCDRCCAGY 337
Query: 282 NDAPWRRAS-DDANEC 296
N WR A+ + +NEC
Sbjct: 338 NQRRWRPATWEQSNEC 353
>UNIPROTKB|F1MAN8 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 IPI:IPI00190577
Ensembl:ENSRNOT00000008981 ArrayExpress:F1MAN8 Uniprot:F1MAN8
Length = 3719
Score = 481 (174.4 bits), Expect = 7.3e-44, P = 7.3e-44
Identities = 116/318 (36%), Positives = 162/318 (50%)
Query: 7 PPFENAAFSASVESTNTCGYQ---NGVPQPTR--FCVQSGTHVTANT---------CDYC 52
PP+ N A A + ++ TCG + +PT +C G V CD C
Sbjct: 51 PPYFNLAEGARITASATCGEEAPTRSASRPTEDLYCKLVGGPVAGGDPNQTIQGQYCDIC 110
Query: 53 Y----EDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW- 107
HPV D T WWQS + G ++ N+VN+TL G+ F V YV + F
Sbjct: 111 IAANSNKAHPVSNAID--GTERWWQSPPLSRGPEY-NEVNVTLDLGQVFHVAYVLIKFAN 167
Query: 108 SPRPESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYS 164
SPRP+ + + + T ++ P+QF+++S C E +G P D D V CT+EYS
Sbjct: 168 SPRPDLWVLERSTDFGHTYQPWQFFASSKRDCLERFG-PRTLERITQDDD--VICTTEYS 224
Query: 165 DLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF----LD 220
+ PL G + + + GR A+ FSY+ L++F AT IR+ R NT L D
Sbjct: 225 RIVPLENGEIVVSLVNGRPGARNFSYSPVLRDFTKATNIRLRFLRTNTLLGHLMGKALRD 284
Query: 221 PSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPF 280
P+V R Y+Y+I DIS+G RC C+GHA C SD R C C+HNT G C+ C P
Sbjct: 285 PTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPSD-PFRLQCACQHNTCGGSCDRCCPG 343
Query: 281 YNDAPWRRAS-DDANECR 297
+N PW+ A+ D ANEC+
Sbjct: 344 FNQQPWKPATTDSANECQ 361
>FB|FBgn0002526 [details] [associations]
symbol:LanA "Laminin A" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007422 "peripheral nervous system development" evidence=NAS]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0035001 "dorsal trunk
growth, open tracheal system" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016321
"female meiosis chromosome segregation" evidence=IMP] [GO:0007498
"mesoderm development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0001964 "startle
response" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IMP] [GO:0048854 "brain
morphogenesis" evidence=IMP] [GO:0002121 "inter-male aggressive
behavior" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0035011 "melanotic encapsulation
of foreign target" evidence=IMP] [GO:0036062 "presynaptic
periactive zone" evidence=IDA] [GO:0045886 "negative regulation of
synaptic growth at neuromuscular junction" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0007507 EMBL:AE014296 GO:GO:0030155
GO:GO:0007498 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 GO:GO:0002121
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007476 GO:GO:0016321 GO:GO:0048854
Pfam:PF02210 GO:GO:0031987 GO:GO:0001964 GO:GO:0045995
GO:GO:0035011 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0035001 GO:GO:0005606 KO:K06240 EMBL:M96388 EMBL:L07288
EMBL:M75882 PIR:S28399 RefSeq:NP_476617.1 UniGene:Dm.865
ProteinModelPortal:Q00174 SMR:Q00174 MINT:MINT-754541 STRING:Q00174
PaxDb:Q00174 PRIDE:Q00174 GeneID:38723 KEGG:dme:Dmel_CG10236
CTD:38723 FlyBase:FBgn0002526 InParanoid:Q00174 OrthoDB:EOG4KKWHR
ChiTaRS:LanA GenomeRNAi:38723 NextBio:810058 Bgee:Q00174
GermOnline:CG10236 Uniprot:Q00174
Length = 3712
Score = 450 (163.5 bits), Expect = 1.0e-43, Sum P(2) = 1.0e-43
Identities = 110/303 (36%), Positives = 148/303 (48%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGT---H-----VTANTCDYCY----E 54
PP+ N A + +T TCG P+ V + T H + CDYC E
Sbjct: 26 PPYFNLATGRKIYATATCGQDTDGPELYCKLVGANTEHDHIDYSVIQGQVCDYCDPTVPE 85
Query: 55 DTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPES 113
HP D T WWQS + G+++ N+VN+T+ F + F V Y+ + SPRP
Sbjct: 86 RNHPPENAID--GTEAWWQSPPLSRGMKF-NEVNLTINFEQEFHVAYLFIRMGNSPRPGL 142
Query: 114 FAIYKKTYENSSWTPFQFYS---ASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLT 170
+ + K T +WTP+Q +S A C ETY D D D V CT+EYS + PL
Sbjct: 143 WTLEKSTDYGKTWTPWQHFSDTPADC-ETYFGKDTYKPITRDDD--VICTTEYSKIVPLE 199
Query: 171 GGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL----DPSVLRS 226
G +P L R + + + LQE+ AT +RI L R L DP+V R
Sbjct: 200 NGEIPVMLLNERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDPTVTRR 259
Query: 227 YFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYNDAP 285
YFY+I DIS+G RC CNGHA C V+ R + CRC+H+T G CNEC P +
Sbjct: 260 YFYSIKDISIGGRCMCNGHADTCD-VKDPKSPVRILACRCQHHTCGIQCNECCPGFEQKK 318
Query: 286 WRR 288
WR+
Sbjct: 319 WRQ 321
Score = 65 (27.9 bits), Expect = 1.0e-43, Sum P(2) = 1.0e-43
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 262 VCRCEHNTAGPDCNECAPFY 281
+C+C+ G CNEC P Y
Sbjct: 699 LCKCKERVTGRICNECKPLY 718
Score = 55 (24.4 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 263 CRCEHNTAGPDCNECAP-FYND 283
C C +G C +CAP +Y D
Sbjct: 1776 CSCPPGYSGHSCEDCAPGYYRD 1797
Score = 54 (24.1 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 262 VCRCEHNTAGPDCNECAP 279
VC C N G C+ C P
Sbjct: 1986 VCTCHENVIGDRCDRCKP 2003
Score = 50 (22.7 bits), Expect = 3.8e-42, Sum P(2) = 3.8e-42
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAP 285
C C +N AG C C Y P
Sbjct: 605 CNCLNNFAGKQCTLCTAGYYSYP 627
Score = 47 (21.6 bits), Expect = 7.8e-42, Sum P(2) = 7.8e-42
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAP 285
C C N G C+ C+ Y + P
Sbjct: 1487 CECRQNIEGRACDVCSNGYFNFP 1509
>MGI|MGI:105382 [details] [associations]
symbol:Lama5 "laminin, alpha 5" species:10090 "Mus musculus"
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IMP] [GO:0001738 "morphogenesis of a polarized epithelium"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005178 "integrin
binding" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
[GO:0005604 "basement membrane" evidence=ISO;IDA] [GO:0005605
"basal lamina" evidence=IDA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=ISO] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
[GO:0016477 "cell migration" evidence=ISO] [GO:0030155 "regulation
of cell adhesion" evidence=IEA] [GO:0030324 "lung development"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0043259 "laminin-10 complex"
evidence=ISO;IPI] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IMP] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:105382 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0005178 PROSITE:PS01186 GO:GO:0007229 GO:GO:0042475
EMBL:AL663027 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738 GO:GO:0034446
GO:GO:0090002 GO:GO:0016331 GO:GO:0001658 GO:GO:0060445
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OMA:LRHTTGP OrthoDB:EOG4VHK5G ChiTaRS:LAMA5 GO:GO:0043259
EMBL:AJ293593 EMBL:U37501 IPI:IPI00116913 PIR:T10053
RefSeq:NP_001074640.1 UniGene:Mm.4339 PDB:2Y38 PDBsum:2Y38
ProteinModelPortal:Q61001 SMR:Q61001 STRING:Q61001
PhosphoSite:Q61001 PaxDb:Q61001 PRIDE:Q61001
Ensembl:ENSMUST00000015791 GeneID:16776 KEGG:mmu:16776
InParanoid:A2ABW7 EvolutionaryTrace:Q61001 NextBio:290620
Bgee:Q61001 CleanEx:MM_LAMA5 Genevestigator:Q61001
GermOnline:ENSMUSG00000015647 Uniprot:Q61001
Length = 3718
Score = 477 (173.0 bits), Expect = 1.9e-43, P = 1.9e-43
Identities = 116/318 (36%), Positives = 162/318 (50%)
Query: 7 PPFENAAFSASVESTNTCGYQ---NGVPQPTR--FCVQSGTHVTANT---------CDYC 52
PP+ N A A + ++ TCG + V +PT +C G V CD C
Sbjct: 52 PPYFNLAEGARITASATCGEEAPTRSVSRPTEDLYCKLVGGPVAGGDPNQTIQGQYCDIC 111
Query: 53 Y----EDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW- 107
HPV D T WWQS + G+++ N+VN+TL G+ F V YV + F
Sbjct: 112 TAANSNKAHPVSNAID--GTERWWQSPPLSRGLEY-NEVNVTLDLGQVFHVAYVLIKFAN 168
Query: 108 SPRPESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYS 164
SPRP+ + + + T ++ P+QF+++S C E +G P D D V CT+EYS
Sbjct: 169 SPRPDLWVLERSTDFGHTYQPWQFFASSKRDCLERFG-PRTLERITQDDD--VICTTEYS 225
Query: 165 DLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF----LD 220
+ PL G + + + GR A FSY+ L++F AT IR+ R NT L D
Sbjct: 226 RIVPLENGEIVVSLVNGRPGALNFSYSPLLRDFTKATNIRLRFLRTNTLLGHLMGKALRD 285
Query: 221 PSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPF 280
P+V R Y+Y+I DIS+G RC C+GHA C D R C C+HNT G C+ C P
Sbjct: 286 PTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPLD-PFRLQCACQHNTCGGSCDRCCPG 344
Query: 281 YNDAPWRRAS-DDANECR 297
+N PW+ A+ D ANEC+
Sbjct: 345 FNQQPWKPATTDSANECQ 362
>UNIPROTKB|Q16787 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008544 "epidermis
development" evidence=TAS] [GO:0005198 "structural molecule
activity" evidence=NAS] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0031581 "hemidesmosome assembly" evidence=TAS] [GO:0034329
"cell junction assembly" evidence=TAS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0030155 GO:GO:0005198
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
Reactome:REACT_111155 Pathway_Interaction_DB:syndecan_4_pathway
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0008544 GO:GO:0005604 DrugBank:DB00009 DrugBank:DB00029
DrugBank:DB00031 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0031581 DrugBank:DB00015 GO:GO:0045995 Orphanet:79402
eggNOG:NOG292643 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:L34155 EMBL:AY327115 EMBL:AY327116 EMBL:AB107369 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 EMBL:X85107 EMBL:X85108 EMBL:X84900
IPI:IPI00377045 IPI:IPI00743994 IPI:IPI00790908 PIR:A55347
RefSeq:NP_000218.2 RefSeq:NP_001121189.1 RefSeq:NP_937762.1
UniGene:Hs.436367 ProteinModelPortal:Q16787 SMR:Q16787
IntAct:Q16787 MINT:MINT-1431248 STRING:Q16787 PhosphoSite:Q16787
DMDM:215274012 PaxDb:Q16787 PRIDE:Q16787 DNASU:3909
Ensembl:ENST00000313654 Ensembl:ENST00000399516 GeneID:3909
KEGG:hsa:3909 UCSC:uc002kuq.3 CTD:3909 GeneCards:GC18P021269
HGNC:HGNC:6483 HPA:CAB010757 HPA:HPA009309 MIM:226700 MIM:245660
MIM:600805 neXtProt:NX_Q16787 Orphanet:79404 Orphanet:2407
PharmGKB:PA30272 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
OMA:DSCQGCS OrthoDB:EOG4FBHS0 ChiTaRS:LAMA3 GenomeRNAi:3909
NextBio:15345 PMAP-CutDB:Q6VU68 ArrayExpress:Q16787 Bgee:Q16787
CleanEx:HS_LAMA3 Genevestigator:Q16787 GermOnline:ENSG00000053747
GO:GO:0005610 Uniprot:Q16787
Length = 3333
Score = 469 (170.2 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 113/314 (35%), Positives = 164/314 (52%)
Query: 7 PPFENAAFSASVESTNTCGYQN---GVPQPTRFCVQ--------SGTHVTANTCDYCY-E 54
P + N A +A + +T TCG + G PQP +C SG + CDYC E
Sbjct: 49 PTYFNLAEAARIWATATCGERGPGEGRPQPELYCKLVGGPTAPGSGHTIQGQFCDYCNSE 108
Query: 55 D---THPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPR 110
D HPV D S WWQS + G Q+ N+VN+TL G+ F V Y+ + F SPR
Sbjct: 109 DPRKAHPVTNAIDGSER--WWQSPPLSSGTQY-NRVNLTLDLGQLFHVAYILIKFANSPR 165
Query: 111 PESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLS 167
P+ + + + S+++P+Q+++ S C + +G + N D D V C +EYS +
Sbjct: 166 PDLWVLERSVDFGSTYSPWQYFAHSKVDCLKEFGR-EANMAVTRDDD--VLCVTEYSRIV 222
Query: 168 PLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL----DPSV 223
PL G V + + GR AK F+++ L+EF AT IR+ R NT L DP+V
Sbjct: 223 PLENGEVVVSLINGRPGAKNFTFSHTLREFTKATNIRLRFLRTNTLLGHLISKAQRDPTV 282
Query: 224 LRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYND 283
R Y+Y+I DIS+G +C CNGHA C + + R C C+H+T G C+ C YN
Sbjct: 283 TRRYYYSIKDISIGGQCVCNGHAEVCN-INNPEKLFR--CECQHHTCGETCDRCCTGYNQ 339
Query: 284 APWRRAS-DDANEC 296
WR A+ + ++EC
Sbjct: 340 RRWRPAAWEQSHEC 353
>UNIPROTKB|O15230 [details] [associations]
symbol:LAMA5 "Laminin subunit alpha-5" species:9606 "Homo
sapiens" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0090002 "establishment of protein
localization to plasma membrane" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IC] [GO:0016477 "cell
migration" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=NAS] [GO:0008283 "cell proliferation" evidence=NAS]
[GO:0005605 "basal lamina" evidence=NAS] [GO:0048041 "focal
adhesion assembly" evidence=NAS] [GO:0009790 "embryo development"
evidence=NAS] [GO:0045446 "endothelial cell differentiation"
evidence=NAS] [GO:0008037 "cell recognition" evidence=NAS]
[GO:0001525 "angiogenesis" evidence=NAS] [GO:0005178 "integrin
binding" evidence=IDA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=NAS] [GO:0043259 "laminin-10 complex" evidence=IDA;TAS]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0043260 "laminin-11 complex" evidence=TAS]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IDA] InterPro:IPR001368 InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0007010
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0005198
GO:GO:0030324 GO:GO:0008283 GO:GO:0001755 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009790 GO:GO:0030334 GO:GO:0001942
GO:GO:0007517 GO:GO:0048041 GO:GO:0005178 PROSITE:PS01186
GO:GO:0007229 GO:GO:0042475 EMBL:AL354836 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384
GO:GO:0001738 GO:GO:0034446 GO:GO:0090002
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0016331
GO:GO:0001658 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
Pathway_Interaction_DB:syndecan_1_pathway GO:GO:0060445
Pfam:PF02210 GO:GO:0008037 DrugBank:DB00015 GO:GO:0045995
GO:GO:0045446 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
EMBL:AF443072 EMBL:AB067494 EMBL:AB011105 EMBL:Z95636
IPI:IPI00783665 RefSeq:NP_005551.3 UniGene:Hs.473256
ProteinModelPortal:O15230 SMR:O15230 IntAct:O15230
MINT:MINT-1183475 STRING:O15230 PhosphoSite:O15230 PaxDb:O15230
PRIDE:O15230 DNASU:3911 Ensembl:ENST00000252999 GeneID:3911
KEGG:hsa:3911 UCSC:uc002ycq.3 CTD:3911 GeneCards:GC20M060883
H-InvDB:HIX0015978 HGNC:HGNC:6485 MIM:601033 neXtProt:NX_O15230
PharmGKB:PA30274 InParanoid:O15230 OMA:LRHTTGP OrthoDB:EOG4VHK5G
ChiTaRS:LAMA5 GenomeRNAi:3911 NextBio:15363 ArrayExpress:O15230
Bgee:O15230 CleanEx:HS_LAMA5 Genevestigator:O15230
GermOnline:ENSG00000130702 GO:GO:0043259 GO:GO:0043260
Uniprot:O15230
Length = 3695
Score = 469 (170.2 bits), Expect = 1.4e-42, P = 1.4e-42
Identities = 113/318 (35%), Positives = 162/318 (50%)
Query: 7 PPFENAAFSASVESTNTCGYQ---NGVPQPTR--FCVQSGTHVTANT---------CDYC 52
PP+ N A A + ++ TCG + G P+PT +C G V CD C
Sbjct: 47 PPYFNLAEGARIAASATCGEEAPARGSPRPTEDLYCKLVGGPVAGGDPNQTIRGQYCDIC 106
Query: 53 Y----EDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW- 107
HP D T WWQS + G+++ N+VN+TL G+ F V YV + F
Sbjct: 107 TAANSNKAHPASNAID--GTERWWQSPPLSRGLEY-NEVNVTLDLGQVFHVAYVLIKFAN 163
Query: 108 SPRPESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYS 164
SPRP+ + + + ++ P+QF+++S C E +G P D D + CT+EYS
Sbjct: 164 SPRPDLWVLERSMDFGRTYQPWQFFASSKRDCLERFG-PQTLERITRD-DAAI-CTTEYS 220
Query: 165 DLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF----LD 220
+ PL G + + + GR A FSY+ L+EF AT +R+ R NT L D
Sbjct: 221 RIVPLENGEIVVSLVNGRPGAMNFSYSPLLREFTKATNVRLRFLRTNTLLGHLMGKALRD 280
Query: 221 PSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPF 280
P+V R Y+Y+I DIS+G RC C+GHA C +D R C C+HNT G C+ C P
Sbjct: 281 PTVTRRYYYSIKDISIGGRCVCHGHADACDAKDPTD-PFRLQCTCQHNTCGGTCDRCCPG 339
Query: 281 YNDAPWRRAS-DDANECR 297
+N PW+ A+ + ANEC+
Sbjct: 340 FNQQPWKPATANSANECQ 357
>ZFIN|ZDB-GENE-030131-9823 [details] [associations]
symbol:lama5 "laminin, alpha 5" species:7955
"Danio rerio" [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0033333 "fin development" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0035141 "medial fin morphogenesis"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0035138 "pectoral fin morphogenesis" evidence=IMP] [GO:0033334
"fin morphogenesis" evidence=IMP] InterPro:IPR000742
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
PROSITE:PS50026 ZFIN:ZDB-GENE-030131-9823 GO:GO:0008104
GO:GO:0030155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016337 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
eggNOG:COG0419 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OrthoDB:EOG4VHK5G GO:GO:0035138 EMBL:DQ232730 IPI:IPI00734953
RefSeq:NP_001034260.1 UniGene:Dr.12091 ProteinModelPortal:Q2Q1W5
STRING:Q2Q1W5 PRIDE:Q2Q1W5 GeneID:321243 KEGG:dre:321243
NextBio:20807298 ArrayExpress:Q2Q1W5 Bgee:Q2Q1W5 GO:GO:0035141
Uniprot:Q2Q1W5
Length = 3664
Score = 465 (168.7 bits), Expect = 3.6e-42, P = 3.6e-42
Identities = 113/312 (36%), Positives = 159/312 (50%)
Query: 7 PPFENAAFSASVESTNTCGY-QNGVPQPTRFCVQSGTHVTANT--------CDYCY-EDT 56
PP+ N A + +T TCG +N P +C G V+ + CD C +DT
Sbjct: 44 PPYFNLAEGTKITATATCGVDENEQPIQDLYCKLVGGPVSGDPSQTIQGQYCDICSSQDT 103
Query: 57 ---HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPE 112
HP+ D T WWQS + + NQVN+TL G+ F V YV + F SPRP+
Sbjct: 104 NRAHPISNAID--GTERWWQSPPLSRSAKH-NQVNVTLDLGQLFHVAYVLIKFANSPRPD 160
Query: 113 SFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPL 169
+ + + ++ P+QF+++S C E +G + + D V CT+EYS + PL
Sbjct: 161 LWVLERSIDFGKTYQPWQFFASSKRDCIERFG---QRTIERIYHDDDVICTTEYSRIVPL 217
Query: 170 TGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF----LDPSVLR 225
G + + + GR A FSY+ L+EF AT IR+ R NT L DP+V R
Sbjct: 218 ENGEIVVSLVNGRPGAMNFSYSPVLREFTKATNIRLRFLRTNTLLGHLMGKTLRDPTVTR 277
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAP 285
Y+Y+I DIS+G RC CNGHA C +D + C C+HNT G C+ C P +N P
Sbjct: 278 KYYYSIKDISIGGRCVCNGHAEACNAQDPND-PYKLQCDCQHNTCGTSCDGCCPGFNQFP 336
Query: 286 WRRASD-DANEC 296
W+ A+ ANEC
Sbjct: 337 WKPATTYSANEC 348
>UNIPROTKB|F1LU77 [details] [associations]
symbol:F1LU77 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 GO:GO:0005610 IPI:IPI00768265
Ensembl:ENSRNOT00000015750 ArrayExpress:F1LU77 Uniprot:F1LU77
Length = 3149
Score = 456 (165.6 bits), Expect = 2.7e-41, P = 2.7e-41
Identities = 100/262 (38%), Positives = 145/262 (55%)
Query: 49 CDYCY-EDT---HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRL 104
CDYC ED+ HP + D S WWQS + G Q+ N+VN+TL G+ F V Y+ +
Sbjct: 5 CDYCNSEDSRKAHPAIHAIDGSER--WWQSPPLSSGTQY-NKVNLTLDLGQLFHVAYILI 61
Query: 105 LFW-SPRPESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCT 160
F SPRP+ + + + ++++P+Q+++ S C + +G + A D +V C
Sbjct: 62 KFANSPRPDLWVLERSVDFGNTYSPWQYFAHSRGDCLQQFG---QEANMAVTRDDQVLCV 118
Query: 161 SEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL- 219
+EYS + PL G + + + GR AK F+++ L+EF AT IR+ R NT L
Sbjct: 119 TEYSRIVPLENGEIVVSLINGRPGAKHFAFSDTLREFTKATNIRLRFLRTNTLLGHLISK 178
Query: 220 ---DPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCN 275
DP+V R Y+Y+I DISVG RC CNGHA C +D ++ C+C+H+T G CN
Sbjct: 179 AERDPTVTRRYYYSIKDISVGGRCVCNGHAEAC----SADNPEKQFRCKCQHHTCGDTCN 234
Query: 276 ECAPFYNDAPWRRASDDA-NEC 296
C YN PWR A+ D NEC
Sbjct: 235 RCCAGYNQRPWRPAAQDQHNEC 256
>UNIPROTKB|F1MC13 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090002 "establishment of protein localization to
plasma membrane" evidence=IEA] [GO:0060445 "branching involved in
salivary gland morphogenesis" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005178 "integrin binding" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0045995 "regulation
of embryonic development" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 EMBL:DAAA02036259 EMBL:DAAA02036256
EMBL:DAAA02036257 EMBL:DAAA02036258 IPI:IPI00717460
Ensembl:ENSBTAT00000003981 Uniprot:F1MC13
Length = 3656
Score = 452 (164.2 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 100/262 (38%), Positives = 144/262 (54%)
Query: 49 CDYCYEDT----HPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRL 104
CD C + HPV D T WWQS + G+++ N+VN+TL G+ F V YV +
Sbjct: 85 CDICTAASSNRAHPVSNAID--GTERWWQSPPLSRGLEY-NEVNVTLDLGQVFHVAYVLI 141
Query: 105 LFW-SPRPESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCT 160
F SPRP+ + + + T ++ P+Q++++S C E +GL + + D V C+
Sbjct: 142 KFANSPRPDLWVLERSTDFGHTYQPWQYFASSKRDCLERFGL---RTLERITQDDDVICS 198
Query: 161 SEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF-- 218
+EYS + PL G + + + GR A FSY+ L++F AT IR+ R NT L
Sbjct: 199 TEYSRIVPLENGEIVVSLVNGRPGAMNFSYSPLLRDFTKATNIRLRFLRTNTLLGHLMGK 258
Query: 219 --LDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNE 276
DP+V R Y+Y+I DIS+G RC C+GHA C +D R C C+HNT G C+
Sbjct: 259 ALRDPTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPTD-PFRLQCACQHNTCGGSCDR 317
Query: 277 CAPFYNDAPWRRAS-DDANECR 297
C P +N PWR A+ D ANEC+
Sbjct: 318 CCPGFNQQPWRPATTDSANECQ 339
Score = 259 (96.2 bits), Expect = 7.6e-26, Sum P(2) = 7.6e-26
Identities = 68/228 (29%), Positives = 114/228 (50%)
Query: 7 PPFENAAFSASVESTNTCGYQ---NGVPQPTR--FCVQSGTHVTANT---------CDYC 52
PP+ N A A + ++ TCG + G P+PT +C G V CD C
Sbjct: 29 PPYFNLAEGARIAASATCGEEAPARGAPRPTEDLYCKLVGGPVAGGDPNQTIQGQYCDIC 88
Query: 53 YE-DTHPVRYLTD-LSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SP 109
++ +++ + T WWQS + G+++ N+VN+TL G+ F V YV + F SP
Sbjct: 89 TAASSNRAHPVSNAIDGTERWWQSPPLSRGLEY-NEVNVTLDLGQVFHVAYVLIKFANSP 147
Query: 110 RPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPL 169
RP+ + + + T ++ P+Q++++S ++ + + D V C++EYS + PL
Sbjct: 148 RPDLWVLERSTDFGHTYQPWQYFASSKRDCLERFGLRTLERITQDDDVICSTEYSRIVPL 207
Query: 170 TGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDEL 217
G + + + GR A FSY+ L++F AT IR+ R NT L
Sbjct: 208 ENGEIVVSLVNGRPGAMNFSYSPLLRDFTKATNIRLRFLRTNTLLGHL 255
Score = 86 (35.3 bits), Expect = 7.6e-26, Sum P(2) = 7.6e-26
Identities = 22/70 (31%), Positives = 33/70 (47%)
Query: 240 CKCNGHASEC---PYVRQSDGSTRR--------VC-RCEHNTAGPDCNECAPFYNDAPWR 287
C C GHA +C P V + + S + VC C+H+T G +C +C P + +P
Sbjct: 341 CNCYGHAHDCYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSP-D 399
Query: 288 RASDDANECR 297
D + CR
Sbjct: 400 HPLDSPHACR 409
Score = 79 (32.9 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 21/61 (34%), Positives = 26/61 (42%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCR-CEHNTAGPDCNECAP-FYNDA--PWRRASDDANE 295
C C+G+ D T CR C +T GP C CAP FY +A P D +
Sbjct: 1930 CDCSGNGDPNMLFSDCDPLTG-TCRGCLRHTTGPRCESCAPGFYGNALLPGNCTRCDCSP 1988
Query: 296 C 296
C
Sbjct: 1989 C 1989
Score = 78 (32.5 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 22/64 (34%), Positives = 24/64 (37%)
Query: 237 GAR-CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAP---WRRASDD 292
G R C C G A+E G C C T GP C ECAP + P RR
Sbjct: 2027 GCRPCAC-GPAAESSECHPQSGQ----CHCRPGTGGPQCRECAPGHWGLPEQGCRRCQCQ 2081
Query: 293 ANEC 296
C
Sbjct: 2082 GGHC 2085
Score = 74 (31.1 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVC-RCEHNTAGPDCNEC 277
C+C+GH+ C GS VC C+HNT G C C
Sbjct: 1824 CQCHGHSDRC-----LPGSG--VCIGCQHNTEGDHCERC 1855
Score = 73 (30.8 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 236 VGAR-CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD 291
VG C C+G + D + + C+C N AG C+ CAP ++ P R D
Sbjct: 1488 VGCEECNCSGPGVQELMDPTCDADSGQ-CKCRPNVAGRRCDTCAPGFHGFPSCRPCD 1543
Score = 65 (27.9 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 258 STRRVCRCEHNTAGPDCNECAP-FYND 283
S +C C N G C ECAP +Y D
Sbjct: 1786 SNVELCMCPANYLGDSCQECAPGYYRD 1812
Score = 62 (26.9 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAP 285
C C+ S V Q G+ +CRC AG C EC+P ++ P
Sbjct: 615 CACDPRGS----VDQLCGAGG-LCRCCSGYAGSTCQECSPGFHGFP 655
Score = 60 (26.2 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 18/56 (32%), Positives = 22/56 (39%)
Query: 237 GAR-CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD 291
GAR C C+ + P G C C + G DC+ CA Y P R D
Sbjct: 1399 GARPCGCHEVGAMSPTCEPFGGQ----CPCRAHVIGRDCSRCATGYWGFPSCRPCD 1450
Score = 56 (24.8 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 263 CRCEHNTAGPDCNECAP-FYNDAP 285
C C + GP C+ C P F+ +P
Sbjct: 727 CTCRAHVEGPSCDRCKPGFWGLSP 750
Score = 56 (24.8 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNEC 277
C C+ A P D T + C C+ N GP C++C
Sbjct: 1542 CDCH-EAGSAPGT--CDPLTGQ-CYCKENVQGPRCDQC 1575
Score = 56 (24.8 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 17/65 (26%), Positives = 24/65 (36%)
Query: 221 PSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPF 280
P RS + + RC C ++ + T R C C N G C+ CA
Sbjct: 392 PGFYRSPDHPLDSPHACRRCNCESDFTD----GTCEDLTGR-CYCRPNFTGARCDACAEG 446
Query: 281 YNDAP 285
+ D P
Sbjct: 447 FTDFP 451
Score = 54 (24.1 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 260 RRVCRCEHNTAGPDCNECAP-FYND 283
R C C+ AG C CAP F+ +
Sbjct: 1895 RTQCLCKPGYAGASCERCAPGFFGN 1919
Score = 53 (23.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 256 DGSTRRVCRCEHNTAGPDCNECAPFYNDAP 285
D + R +CR E N GP C+ C Y+ P
Sbjct: 583 DDAGRCLCRPEFN--GPHCDRCRLGYHGYP 610
Score = 52 (23.4 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAP-FY 281
C C+ ++ R+ D C C+ N G C CAP FY
Sbjct: 477 CDCSAAGTQGNACRK-DPQVGH-CVCKPNFQGTHCELCAPGFY 517
Score = 50 (22.7 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAP 285
C C G C+ CAP Y P
Sbjct: 543 CTCRTGFEGAACDRCAPGYFHFP 565
Score = 47 (21.6 bits), Expect = 9.0e-22, Sum P(2) = 9.0e-22
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 237 GAR-CKCN-GHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECA 278
G R C+C+ G A + QS C C NT G C+E A
Sbjct: 808 GCRSCRCDVGGA-----LGQSCELRTGACMCRPNTQGSTCSEPA 846
Score = 46 (21.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 8/17 (47%), Positives = 8/17 (47%)
Query: 263 CRCEHNTAGPDCNECAP 279
C C T PDC C P
Sbjct: 1463 CICPPRTIPPDCLVCQP 1479
Score = 43 (20.2 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 13/40 (32%), Positives = 15/40 (37%)
Query: 239 RCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECA 278
RC+C G C D T R C C G C C+
Sbjct: 2077 RCQCQG--GHC------DLHTGR-CTCPPGLGGERCETCS 2107
Score = 42 (19.8 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 263 CRCEHNTAGPDCNECAP-FYN 282
C C G C+ C P YN
Sbjct: 679 CSCRPRVTGLRCDMCVPGAYN 699
Score = 39 (18.8 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 239 RCKCN-----GHASECPYVRQSDGSTRRVCRCEHNTAGPDCNEC 277
RC C+ G A++C + +G C C+ + G C C
Sbjct: 758 RCNCDPRGTLGGAAQC---QLGNGQ----CFCKPHVCGQTCAAC 794
>UNIPROTKB|F1MDD5 [details] [associations]
symbol:Bt.12589 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:DAAA02056591
EMBL:DAAA02056592 EMBL:DAAA02056593 EMBL:DAAA02056594
EMBL:DAAA02056595 EMBL:DAAA02056596 EMBL:DAAA02056597
EMBL:DAAA02056598 EMBL:DAAA02056599 EMBL:DAAA02056600
EMBL:DAAA02056601 EMBL:DAAA02056602 IPI:IPI00686590
Ensembl:ENSBTAT00000060991 ArrayExpress:F1MDD5 Uniprot:F1MDD5
Length = 3242
Score = 451 (163.8 bits), Expect = 9.4e-41, P = 9.4e-41
Identities = 104/261 (39%), Positives = 142/261 (54%)
Query: 49 CDYCY-ED---THPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRL 104
CDYC ED HPV D S WWQS + G+Q+ N+VN+TL G+ F V YV +
Sbjct: 5 CDYCNSEDPRKAHPVTNAIDGSER--WWQSPPLSSGMQY-NKVNVTLDLGQLFQVAYVLI 61
Query: 105 LFW-SPRPESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCT 160
F SPRP+ + + + S+++P+Q+++ S C E +G + N D D V CT
Sbjct: 62 KFANSPRPDLWVLERSVDFGSTYSPWQYFAHSKVDCLEQFG-QEANRAITRDDD--VLCT 118
Query: 161 SEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL- 219
+EYS + PL G V + + GR AK F+++ L+EF AT IR+ R NT L
Sbjct: 119 TEYSRIVPLENGEVVVSLINGRPGAKNFTFSHALREFTKATNIRLRFLRTNTLLGHLISK 178
Query: 220 ---DPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNE 276
DP+V R Y+Y+I DIS+G RC CNGHA C + R C C+HNT G C+
Sbjct: 179 AQRDPTVTRRYYYSIKDISIGGRCVCNGHAEVCN-ANNPEKLFR--CECQHNTCGDTCDR 235
Query: 277 CAPFYNDAPWRRASD-DANEC 296
C YN WR A+ +NEC
Sbjct: 236 CCMGYNQRRWRPATGKQSNEC 256
>UNIPROTKB|F1NZZ2 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0007229 "integrin-mediated signaling pathway" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IEA] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007229 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0090002 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:LRHTTGP GO:GO:0043259 EMBL:AADN02019242
EMBL:AADN02019240 EMBL:AADN02019241 IPI:IPI00578246
Ensembl:ENSGALT00000008535 Uniprot:F1NZZ2
Length = 3668
Score = 446 (162.1 bits), Expect = 3.7e-40, P = 3.7e-40
Identities = 101/263 (38%), Positives = 141/263 (53%)
Query: 49 CDYCYE----DTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRL 104
CD C HP+ D T WWQS + G+++ NQVN+TL G+ F V YV +
Sbjct: 85 CDICSSANSNKAHPITNAID--GTERWWQSPPLSRGLEF-NQVNVTLDLGQLFHVAYVLI 141
Query: 105 LFW-SPRPESFAIYKKTYENSSWTPFQFYSAS---CQETYGLPD-DNSGKANDSDTRVFC 159
F SPRP+ + + + T ++ P+Q++++S C E +GL D K D C
Sbjct: 142 KFANSPRPDLWVLERSTDFGLTYEPWQYFASSKRDCIEKFGLQTVDRITK----DDHAIC 197
Query: 160 TSEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF- 218
T+EYS + PL G + + + GR A FSY+ L+ F AT IR+ + NT L
Sbjct: 198 TTEYSRIVPLENGEIVVSLVNGRPGAMNFSYSPLLRNFTKATNIRLRFLQTNTLLGHLMG 257
Query: 219 ---LDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCN 275
DP+V R Y+Y+I DIS+G RC C+GHA C SD R C C+HNT G C+
Sbjct: 258 KALRDPTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPSD-PYRLQCDCQHNTCGGSCD 316
Query: 276 ECAPFYNDAPWRRAS-DDANECR 297
C P +N PW+ A+ D ANEC+
Sbjct: 317 RCCPGFNQFPWKPATADSANECQ 339
Score = 247 (92.0 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 65/228 (28%), Positives = 109/228 (47%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTR------FCVQSGT--------HVTANTCDYC 52
PP+ N A + ++ TCG + V +R +C G + CD C
Sbjct: 29 PPYFNLAEGTRISASATCGEETAVTSGSRRAVEDLYCKLGGPLAGGDPNQTIQGQYCDIC 88
Query: 53 YE-DTHPVRYLTD-LSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SP 109
+++ +T+ + T WWQS + G+++ NQVN+TL G+ F V YV + F SP
Sbjct: 89 SSANSNKAHPITNAIDGTERWWQSPPLSRGLEF-NQVNVTLDLGQLFHVAYVLIKFANSP 147
Query: 110 RPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPL 169
RP+ + + + T ++ P+Q++++S ++ + D CT+EYS + PL
Sbjct: 148 RPDLWVLERSTDFGLTYEPWQYFASSKRDCIEKFGLQTVDRITKDDHAICTTEYSRIVPL 207
Query: 170 TGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDEL 217
G + + + GR A FSY+ L+ F AT IR+ + NT L
Sbjct: 208 ENGEIVVSLVNGRPGAMNFSYSPLLRNFTKATNIRLRFLQTNTLLGHL 255
Score = 92 (37.4 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 22/58 (37%), Positives = 28/58 (48%)
Query: 240 CKCNGHASEC---PYVRQSDGSTRR--------VC-RCEHNTAGPDCNECAPFYNDAP 285
C CNGHA +C P V + S R VC C+H+T G +C C P Y +P
Sbjct: 341 CNCNGHAYDCYYDPEVDRHKASKSREDKFEGGGVCIDCQHHTTGVNCERCIPGYYRSP 398
Score = 86 (35.3 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 20/58 (34%), Positives = 26/58 (44%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAP-FYNDAPWRRASDDANEC 296
C C+G+ D T C H+TAG C CAP FY DA A+ + +C
Sbjct: 1947 CDCSGNTDPNMLFSSCDSLTGTCMGCMHHTAGVRCEVCAPGFYGDAV---AAKNCTQC 2001
Score = 86 (35.3 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVC-RCEHNTAGPDCNECAPFYNDAPWRRASDDANEC 296
C CNGH+ +C GS +C C+HNT G C +C Y + R +D + +C
Sbjct: 1841 CHCNGHSDQC-----LPGSG--ICLNCQHNTEGDHCEQCKDGYVGS---RNADGSLQC 1888
Score = 68 (29.0 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 257 GSTRRVCRCEHNTAGPDCNECAPFYNDAP 285
GS+ + C C+ AGP+C CAP Y P
Sbjct: 1910 GSSTQ-CLCKPGYAGPNCERCAPGYYGNP 1937
Score = 67 (28.6 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNE 276
C+C+ S P + G+ CRC NT GP C +
Sbjct: 810 CRCDVGGSLGPSCEERSGA----CRCRQNTRGPTCTQ 842
Score = 67 (28.6 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 20/65 (30%), Positives = 26/65 (40%)
Query: 221 PSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPF 280
P RS + I + RC C ++ + T R C C+ N G CN CA
Sbjct: 392 PGYYRSPDHPIDSPYICYRCNCKSDFTD----GTCEDLTGR-CYCKPNYTGEHCNACAEG 446
Query: 281 YNDAP 285
Y D P
Sbjct: 447 YLDFP 451
Score = 66 (28.3 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 239 RCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNEC 277
RC C+ +E V D T + C C+ N GP C++C
Sbjct: 1557 RCDCHPDGTE---VSVCDPVTGQ-CHCKENVEGPRCDQC 1591
Score = 63 (27.2 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 258 STRRVCRCEHNTAGPDCNECAP-FYND 283
S +C C N G C ECAP +Y D
Sbjct: 1803 SNVELCFCPANYLGDSCQECAPGYYRD 1829
Score = 62 (26.9 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAPWRRASD 291
C+C+ N G C+ CAP Y P R D
Sbjct: 1531 CKCKPNVIGRRCDLCAPGYYHYPSCRRCD 1559
Score = 61 (26.5 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAP 285
C+C+G Y D T + C C G C+ CAP Y + P
Sbjct: 524 CQCSGPGQ---YDGTCDSETGQ-CLCRTGFEGQLCDRCAPGYFNYP 565
Score = 60 (26.2 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 22/58 (37%), Positives = 25/58 (43%)
Query: 237 GARCK-CN-GHAS--ECPYVRQSDG--------STRRVCRCEHNTAGPDCNECA-PFY 281
G RC+ C+ GH S C Y D S CRC N G CN+CA FY
Sbjct: 596 GPRCEQCSSGHHSYPHC-YACSCDSRGAVDNNCSPAGQCRCHVNFTGHTCNQCALGFY 652
Score = 59 (25.8 bits), Expect = 9.1e-22, Sum P(2) = 9.1e-22
Identities = 11/34 (32%), Positives = 13/34 (38%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAPWRRASDDANEC 296
C C GP C+ C P Y W D+ C
Sbjct: 725 CACRAYVEGPACDRCKPLY----WNLTPDNPYGC 754
Score = 59 (25.8 bits), Expect = 9.1e-22, Sum P(2) = 9.1e-22
Identities = 23/77 (29%), Positives = 34/77 (44%)
Query: 220 DPSVLRSYFYAIADISVGAR-CKCN---GHASEC-PYVRQSDGSTRRVCRCEHNTAGPDC 274
D ++ S FY + GA+ C+C+ S+C P+ Q C C+ N G +C
Sbjct: 1403 DSAISLSLFY-----NNGAQPCQCHEAGARGSQCEPFGGQ--------CPCKSNVIGREC 1449
Query: 275 NECAPFYNDAPWRRASD 291
+ CA Y P R D
Sbjct: 1450 SRCATGYWGFPNCRPCD 1466
Score = 57 (25.1 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 240 CKCN--GHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFY 281
CKC G S +Q +G C C+ NT G C+ C Y
Sbjct: 757 CKCETKGTISGIAECQQGNGQ----CFCKPNTCGQFCSACKDGY 796
Score = 56 (24.8 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 17/56 (30%), Positives = 21/56 (37%)
Query: 228 FYAIADISVGARCKCNGHA--SECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFY 281
+Y S RC C+ A S C G C C +G C +CAP Y
Sbjct: 2036 YYGFEGCSGCRRCDCDVGAMGSSC---HAQTGQ----CHCLPGVSGSRCQQCAPGY 2084
Score = 54 (24.1 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 256 DGSTRRVCRCEHNTAGPDCNECAPFYNDAP 285
D S R C C+ AGP C +C+ ++ P
Sbjct: 583 DSSGR--CFCKAEFAGPRCEQCSSGHHSYP 610
Score = 50 (22.7 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 262 VCRCEHNTAGPDCNECAP 279
+C C+ N G C++C P
Sbjct: 497 MCVCKPNFQGTHCDQCTP 514
Score = 49 (22.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 11/40 (27%), Positives = 14/40 (35%)
Query: 240 CKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAP 279
C+C+ S Q G C C G C+ C P
Sbjct: 660 CQCSREGSLHSTCNQETGQ----CSCRPKVTGLRCDSCVP 695
Score = 45 (20.9 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 15/51 (29%), Positives = 19/51 (37%)
Query: 236 VGARC-KCNGHASECPYVRQSDGSTRRV------CRCEHNTAGPDCNECAP 279
+G C +C P R D TR C C +T P+C C P
Sbjct: 1445 IGRECSRCATGYWGFPNCRPCDCGTRLCDEVTGQCICPPHTLKPECVVCEP 1495
Score = 43 (20.2 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 239 RCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFY 281
+C+C G C D T C C + G C+ C Y
Sbjct: 2094 KCECRG--GSC------DPRTGE-CTCSNGLTGKQCDVCMHNY 2127
Score = 39 (18.8 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 263 CRCEHNTAGPDCNECAPFY 281
C C+ G C+ C Y
Sbjct: 2018 CFCKAGVTGQHCDHCEEGY 2036
Score = 37 (18.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 6/17 (35%), Positives = 7/17 (41%)
Query: 261 RVCRCEHNTAGPDCNEC 277
R C C + P EC
Sbjct: 2093 RKCECRGGSCDPRTGEC 2109
>UNIPROTKB|E2R3Q6 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005794 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
CTD:4917 KO:K06844 OMA:TASPLCW GeneTree:ENSGT00700000104042
EMBL:AAEX03004613 RefSeq:XP_537003.3 Ensembl:ENSCAFT00000030773
GeneID:479878 KEGG:cfa:479878 NextBio:20854992 Uniprot:E2R3Q6
Length = 577
Score = 374 (136.7 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 84/243 (34%), Positives = 119/243 (48%)
Query: 57 HPVRYLTDLSNTTT--WWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESF 114
HP LT +TT W+S + Q P+ V +T+ GK F++ +V L F S P S
Sbjct: 76 HPAALLTSAGSTTNPVCWRSEAL---TQAPHNVTLTVPLGKAFELVFVSLRFCSAPPASV 132
Query: 115 AIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
A+ K SW P F+S+ C+ YG P + C E + P GG +
Sbjct: 133 ALLKSQDHGRSWAPLGFFSSRCRLDYGRPPAPADGPAGPGPEALCFPE-PQVQPDGGGLL 191
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADI 234
F+ +G + LQ++VTAT+I++ L R D D Y Y+ ++
Sbjct: 192 AFSVQDGSPPGLDLDSSPVLQDWVTATDIQVVLTRPAVLGDSR--DSIATGPYSYSATEL 249
Query: 235 SVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DA 293
VG RCKCNGHAS C + + G +C C+H T GPDC C PFY D PW+RA+ +A
Sbjct: 250 QVGGRCKCNGHASRC--LLDTQGHL--ICDCQHGTEGPDCGRCKPFYCDRPWQRATAREA 305
Query: 294 NEC 296
+ C
Sbjct: 306 HAC 308
Score = 111 (44.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 28/64 (43%), Positives = 31/64 (48%)
Query: 240 CKCNGHASECPY----VRQSDGSTRRVC-RCEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
C CNGHA C + R S + VC C HNTAG C+ C FY D P R SD
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRD-PGRALSD-R 368
Query: 294 NECR 297
CR
Sbjct: 369 RACR 372
Score = 52 (23.4 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 5 CIPPFENAAFSASVESTNTCG 25
C+P NAA V +++TCG
Sbjct: 40 CVPGLVNAALGREVLASSTCG 60
>UNIPROTKB|F1SUI0 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
GeneTree:ENSGT00700000104042 OMA:RAHPASY EMBL:FP102361
RefSeq:XP_003354720.1 Ensembl:ENSSSCT00000008826 GeneID:100622906
KEGG:ssc:100622906 Uniprot:F1SUI0
Length = 580
Score = 373 (136.4 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 87/244 (35%), Positives = 121/244 (49%)
Query: 57 HPVRYLTDLSNTTT--WWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESF 114
HP LT T + W+S ++ Q P V +T+ GK F++ +V L F S P S
Sbjct: 76 HPAALLTSAGGTASPVCWRSDSL---TQVPLNVTLTVPLGKAFELVFVSLRFCSAPPTSV 132
Query: 115 AIYKKTYENSSWTPFQFYSASCQETYG-LPDDNSGKANDSDTRVFCTSEYSDLSPLTGGA 173
A+ K SW P F+S+ C YG LP G A C E P GG
Sbjct: 133 ALLKSQDHGRSWAPLGFFSSRCGLDYGRLPAPVDGPAGPGP-EALCFPE-PQAQPDGGGL 190
Query: 174 VPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIAD 233
+ F+ +G + LQ++VTAT+I++ L R D D + + SY Y+ +
Sbjct: 191 LAFSVQDGSPPGLDLDSSPVLQDWVTATDIQVVLTRPTVLGDTR--DAAAVVSYSYSATE 248
Query: 234 ISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-D 292
+ VG RCKCNGHAS+C + + G +C C H T GPDC C PFY D PW+RA+ +
Sbjct: 249 LQVGGRCKCNGHASKC--LLDTQGHL--ICDCRHGTEGPDCGRCKPFYCDRPWQRATARE 304
Query: 293 ANEC 296
A+ C
Sbjct: 305 AHAC 308
Score = 111 (44.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 28/64 (43%), Positives = 31/64 (48%)
Query: 240 CKCNGHASECPY----VRQSDGSTRRVC-RCEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
C CNGHA C + R S + VC C HNTAG C+ C FY D P R SD
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRD-PGRALSD-R 368
Query: 294 NECR 297
CR
Sbjct: 369 RACR 372
Score = 52 (23.4 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 5 CIPPFENAAFSASVESTNTCG 25
C+P NAA V +++TCG
Sbjct: 40 CVPGLVNAALGREVLASSTCG 60
>WB|WBGene00002248 [details] [associations]
symbol:lam-3 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0030155 GO:GO:0010171
GO:GO:0040011 GO:GO:0040018 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
HSSP:P02468 Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 KO:K05637 GO:GO:0005606 EMBL:Z81125
EMBL:AF074902 EMBL:AL008585 PIR:F87908 PIR:T23064 PIR:T43291
RefSeq:NP_492775.2 UniGene:Cel.19655 ProteinModelPortal:G5ECE3
SMR:G5ECE3 EnsemblMetazoa:T22A3.8 GeneID:172952
KEGG:cel:CELE_T22A3.8 CTD:172952 WormBase:T22A3.8 OMA:TAINEAH
NextBio:877661 Uniprot:G5ECE3
Length = 3102
Score = 420 (152.9 bits), Expect = 1.7e-37, P = 1.7e-37
Identities = 103/313 (32%), Positives = 156/313 (49%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANT----CDYCYEDT----HP 58
P N A ++ + +T+TCG Q + + T NT CD C + HP
Sbjct: 50 PNIFNLATNSLITATDTCG-QYTAEEYCKLVEHVLLRKTTNTQSPQCDICDANNVHKRHP 108
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFAIY 117
+ Y D T WWQS ++ +G+++ +VNIT+ + + V Y+ L SPRP ++ +
Sbjct: 109 IEYAID--GTRRWWQSPSLANGLRF-EKVNITIDLRQEYQVAYIILKMGNSPRPGTWVL- 164
Query: 118 KKTYENSSWTPFQFYS---ASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+K+ + + P+Q+Y+ A C +G+P + V CTSEYS ++PL G +
Sbjct: 165 EKSLDGEYYEPWQYYAMQDAECMRQFGIPATTGVPRFQKEDEVHCTSEYSKITPLENGEI 224
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF--------LDPSVLRS 226
+ + GR A+ S L LQ+F A +R+ L T +L LD SV
Sbjct: 225 HTSLVNGRPGAENTS--LELQKFTRARFVRLRLISPRTLNADLMIINKKSDSLDKSVTMR 282
Query: 227 YFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYNDAP 285
YFY+I+DIS+G +C C GHA CP SD T + C C HNT G CN C P +N P
Sbjct: 283 YFYSISDISIGGQCICYGHAESCP----SDPVTGQFKCECRHNTCGESCNRCCPLFNQLP 338
Query: 286 WRRASDD-ANECR 297
W+ ++ N C+
Sbjct: 339 WKPGTNSHPNVCQ 351
>UNIPROTKB|P25391 [details] [associations]
symbol:LAMA1 "Laminin subunit alpha-1" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] [GO:0005606 "laminin-1
complex" evidence=IDA;IPI] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=ISS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=TAS] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0030155
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005911
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
Pathway_Interaction_DB:syndecan_4_pathway PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 DrugBank:DB00015 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 EMBL:AP002409 EMBL:AP005062 EMBL:AP005210 EMBL:X58531
IPI:IPI00375294 PIR:S14458 RefSeq:NP_005550.2 UniGene:Hs.270364
ProteinModelPortal:P25391 SMR:P25391 DIP:DIP-29324N
MINT:MINT-6740485 STRING:P25391 PhosphoSite:P25391 PaxDb:P25391
PRIDE:P25391 Ensembl:ENST00000389658 GeneID:284217 KEGG:hsa:284217
UCSC:uc002knm.3 CTD:284217 GeneCards:GC18M006941 H-InvDB:HIX0014316
HGNC:HGNC:6481 HPA:CAB010179 MIM:150320 neXtProt:NX_P25391
PharmGKB:PA30270 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 InParanoid:P25391 KO:K05637 OMA:EPFYWRL
OrthoDB:EOG4K3KVB ChiTaRS:LAMA1 GenomeRNAi:284217 NextBio:94628
ArrayExpress:P25391 Bgee:P25391 CleanEx:HS_LAMA1
Genevestigator:P25391 GermOnline:ENSG00000101680 GO:GO:0005606
GO:GO:0005608 Uniprot:P25391
Length = 3075
Score = 408 (148.7 bits), Expect = 5.6e-37, Sum P(2) = 5.6e-37
Identities = 106/313 (33%), Positives = 156/313 (49%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCY------EDTHP 58
P N A +A + + TCG + G P+ V+ G V C C + HP
Sbjct: 24 PAILNLASNAHISTNATCG-EKG-PEMFCKLVEHVPGRPVRNPQCRICDGNSANPRERHP 81
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-PRPESFAIY 117
+ + D T WWQS ++ +G ++ + V ITL + F V YV + + PRP ++ I
Sbjct: 82 ISHAID--GTNNWWQSPSIQNGREY-HWVTITLDLRQVFQVAYVIIKAANAPRPGNW-IL 137
Query: 118 KKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+++ + ++++P+Q+Y+ S C Y + +D V CTS YS L PL G +
Sbjct: 138 ERSLDGTTFSPWQYYAVSDSECLSRYNITPRRGPPTYRADDEVICTSYYSRLVPLEHGEI 197
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF---------LDPSVLR 225
+ + GR A S L EF +A IR+ L R+ T +L LDP V R
Sbjct: 198 HTSLINGRPSADDLSPKL--LEFTSARYIRLRLQRIRTLNADLMTLSHREPKELDPIVTR 255
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYNDA 284
Y+Y+I DISVG C C GHAS CP+ D +T+++ C+CEHNT G CN C P Y+
Sbjct: 256 RYYYSIKDISVGGMCICYGHASSCPW----DETTKKLQCQCEHNTCGESCNRCCPGYHQQ 311
Query: 285 PWRRAS-DDANEC 296
PWR + N C
Sbjct: 312 PWRPGTVSSGNTC 324
Score = 41 (19.5 bits), Expect = 5.6e-37, Sum P(2) = 5.6e-37
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 274 CNECAPFYNDAPWRRASD 291
C+ CAP Y+ A R +D
Sbjct: 816 CDWCAPGYSGAWCERCAD 833
>UNIPROTKB|F1LXY9 [details] [associations]
symbol:Lama2 "Protein Lama2" species:10116 "Rattus
norvegicus" [GO:0005605 "basal lamina" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] RGD:1308889 GO:GO:0007411 GO:GO:0042383
GO:GO:0005605 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
IPI:IPI00781912 Ensembl:ENSRNOT00000061512 ArrayExpress:F1LXY9
Uniprot:F1LXY9
Length = 661
Score = 369 (135.0 bits), Expect = 7.9e-37, Sum P(2) = 7.9e-37
Identities = 97/301 (32%), Positives = 151/301 (50%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCYEDT-HPV-RY- 61
P N A +A + + TCG + G P+ V+ G V C C +++ HP R+
Sbjct: 3 PAVLNLASNALITTNATCG-EKG-PEMYCKLVEHVPGQPVRNPQCRICNQNSSHPYQRHP 60
Query: 62 LTD-LSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFAIYKK 119
+T+ + TWWQS ++ +GV++ + V ITL + F + YV + SPRP ++ I ++
Sbjct: 61 ITNAIDGKNTWWQSPSIKNGVEY-HYVTITLDLQQVFQIAYVIVKAANSPRPGNW-ILER 118
Query: 120 TYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
+ ++ + P+Q+++ + C Y + + D V CTS YS + PL G +
Sbjct: 119 SLDDEEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIHPLENGEIHI 178
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL---------DPSVLRSY 227
+ + GR A S L EF +A IR+ R+ T +L + DP V R Y
Sbjct: 179 SLINGRPSADDPSPEL--LEFTSARYIRLRFQRIRTLNADLMMFAHKDPREIDPIVTRRY 236
Query: 228 FYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYNDAPW 286
+Y++ DISVG C C GHA CP D +T + C CEHNT G C+ C P ++ PW
Sbjct: 237 YYSVKDISVGGMCICYGHARACPL----DPATNKSRCECEHNTCGESCDRCCPGFHQKPW 292
Query: 287 R 287
R
Sbjct: 293 R 293
Score = 56 (24.8 bits), Expect = 7.9e-37, Sum P(2) = 7.9e-37
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 263 CRCEHNTAGPDCNECA-PFYN 282
C C+ N G DC+ C F+N
Sbjct: 448 CSCKENVEGEDCSHCKFGFFN 468
>RGD|619811 [details] [associations]
symbol:Ntn3 "netrin 3" species:10116 "Rattus norvegicus"
[GO:0005102 "receptor binding" evidence=ISO] [GO:0005576
"extracellular region" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0007411 "axon guidance" evidence=NAS] RGD:619811
GO:GO:0007411 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
eggNOG:NOG244580 HOGENOM:HOG000286017 OrthoDB:EOG4VHK67
UniGene:Rn.95949 EMBL:AY028418 IPI:IPI00193993 UCSC:RGD:619811
InParanoid:Q924Z8 Genevestigator:Q924Z8 Uniprot:Q924Z8
Length = 333
Score = 360 (131.8 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 92/265 (34%), Positives = 125/265 (47%)
Query: 37 CVQSGTHVTANTCDYCY-EDTHPVRYLTDLSNTTT--WWQSTTMYDGVQWPNQVNITLKF 93
C + HV CD + H LT T + W+S + P V +T+
Sbjct: 59 CGRPSNHV----CDPSDPQRAHSADLLTSAPGTASPLCWRSDVLQRA---PFNVTLTVPL 111
Query: 94 GKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYG-LPDDNSGKAND 152
GK F++ +V L F S P S A+ K SW P F+S+SC YG LP G A
Sbjct: 112 GKAFELVFVSLRFCSAPPTSVALLKSQDHGRSWVPLGFFSSSCSLDYGRLPAPADGPAGP 171
Query: 153 SDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNT 212
C P GG + F+ +G + + LQ++VTAT+IRI L R
Sbjct: 172 GP-EALCFPA-PQAQPDGGGLLAFSAQDGSPQGLDLDNSPVLQDWVTATDIRIVLTRPAI 229
Query: 213 FYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGP 272
D D V Y Y+ ++ VG RCKCNGH+S C + + G VC C+H T GP
Sbjct: 230 QGDTR--DGGVTVPYSYSATELQVGGRCKCNGHSSRC--LMDTHGHL--VCDCQHGTEGP 283
Query: 273 DCNECAPFYNDAPWRRAS-DDANEC 296
DC+ C PFY D PW+RA+ +A+ C
Sbjct: 284 DCSRCKPFYCDRPWQRATGQEAHAC 308
Score = 50 (22.7 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 CIPPFENAAFSASVESTNTCGY-QNGVPQPT 34
C P NAA V +++TCG N V P+
Sbjct: 40 CTPGLVNAALGLEVLASSTCGRPSNHVCDPS 70
>MGI|MGI:1341188 [details] [associations]
symbol:Ntn3 "netrin 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IDA;IPI] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA] [GO:0007409 "axonogenesis"
evidence=TAS] [GO:0007520 "myoblast fusion" evidence=ISA]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:1341188 GO:GO:0005794
GO:GO:0005576 GO:GO:0006355 GO:GO:0005578 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 Reactome:REACT_127416
GO:GO:0007409 PROSITE:PS01186 GO:GO:0007520 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 CTD:4917 KO:K06844
OMA:TASPLCW EMBL:AF152418 EMBL:AK031199 EMBL:AF149094 EMBL:AF128866
IPI:IPI00471207 RefSeq:NP_035077.1 UniGene:Mm.259542
ProteinModelPortal:Q9R1A3 SMR:Q9R1A3 STRING:Q9R1A3
PhosphoSite:Q9R1A3 PRIDE:Q9R1A3 Ensembl:ENSMUST00000024931
GeneID:18209 KEGG:mmu:18209 GeneTree:ENSGT00700000104042
InParanoid:Q9R1A3 NextBio:293594 Bgee:Q9R1A3 Genevestigator:Q9R1A3
GermOnline:ENSMUSG00000036473 Uniprot:Q9R1A3
Length = 580
Score = 361 (132.1 bits), Expect = 3.6e-36, Sum P(2) = 3.6e-36
Identities = 92/258 (35%), Positives = 125/258 (48%)
Query: 45 TAN-TCDYCY-EDTHPVRYLTDLSNTTT--WWQSTTMYDGVQWPNQVNITLKFGKTFDVT 100
+AN CD + H LT T + W+S + Q P V +T+ GK F++
Sbjct: 62 SANRVCDSSDPQRAHSADLLTSAPGTASPLCWRSDLLQ---QAPFNVTLTVPLGKAFELV 118
Query: 101 YVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYG-LPDDNSGKANDSDTRVFC 159
+V L F S P S A+ K SW P F+S+SC YG LP G + C
Sbjct: 119 FVSLRFCSAPPTSVALLKSQDHGRSWVPLGFFSSSCTLDYGRLPAPADGPSGPGP-EALC 177
Query: 160 TSEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL 219
P GG + F+ +G + + LQ++VTAT+IRI L R D
Sbjct: 178 FPA-PQAQPDGGGLLAFSVQDGSPQGLDLDNSPVLQDWVTATDIRIVLTRPAIQGDTR-- 234
Query: 220 DPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAP 279
D V Y Y+ ++ VG RCKCNGHAS C + + G VC C+H T GPDC+ C P
Sbjct: 235 DGGVTVPYSYSATELQVGGRCKCNGHASRC--LLDTHGHL--VCDCQHGTEGPDCSRCKP 290
Query: 280 FYNDAPWRRAS-DDANEC 296
FY D PW+RA+ +A+ C
Sbjct: 291 FYCDRPWQRATGQEAHAC 308
Score = 109 (43.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 28/64 (43%), Positives = 31/64 (48%)
Query: 240 CKCNGHASECPY----VRQSDGSTRRVC-RCEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
C CNGHA C + R S + VC C HNTAG C+ C FY D P R SD
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRD-PGRVLSD-R 368
Query: 294 NECR 297
CR
Sbjct: 369 RACR 372
Score = 53 (23.7 bits), Expect = 3.6e-36, Sum P(2) = 3.6e-36
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 5 CIPPFENAAFSASVESTNTCG 25
CIP NAA V +++TCG
Sbjct: 40 CIPGLVNAALGREVLASSTCG 60
>UNIPROTKB|G3N0E7 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 CTD:4917 KO:K06844 OMA:TASPLCW
GeneTree:ENSGT00700000104042 EMBL:DAAA02057314
RefSeq:NP_001193834.1 UniGene:Bt.111865 Ensembl:ENSBTAT00000063051
GeneID:787961 KEGG:bta:787961 NextBio:20928798 Uniprot:G3N0E7
Length = 580
Score = 358 (131.1 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 85/244 (34%), Positives = 115/244 (47%)
Query: 57 HPVRYLTDLSNTTT--WWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESF 114
HP LT T + W+S ++ Q P+ V +T+ GK F++ +V L F S P S
Sbjct: 76 HPAALLTSAGGTASPVCWRSDSL---TQVPHNVTLTVPLGKAFELVFVSLRFCSAPPTSL 132
Query: 115 AIYKKTYENSSWTPFQFYSASCQETYG-LPDDNSGKANDSDTRVFCTSEYSDLSPLTGGA 173
A+ K SWTP F+S+ C YG LP G A C P GG
Sbjct: 133 ALLKSQDHGRSWTPLGFFSSHCGLDYGRLPAPADGPAGPGP-EALCFPA-PQAQPDGGGL 190
Query: 174 VPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIAD 233
+ F+ +G + LQ++VTAT+I++ L R D Y Y+ +
Sbjct: 191 LAFSVQDGSPPGLDLDSSPVLQDWVTATDIQVVLTRPAVLGDTR--GAMATAPYSYSATE 248
Query: 234 ISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-D 292
+ VG RCKCNGHAS C D C C H T GPDC+ C PFY D PW+RA+ +
Sbjct: 249 LQVGGRCKCNGHASRCLL----DPQGHLTCDCRHGTEGPDCSRCKPFYCDRPWQRATARE 304
Query: 293 ANEC 296
A+ C
Sbjct: 305 AHAC 308
Score = 111 (44.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 28/64 (43%), Positives = 31/64 (48%)
Query: 240 CKCNGHASECPY----VRQSDGSTRRVC-RCEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
C CNGHA C + R S + VC C HNTAG C+ C FY D P R SD
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRD-PGRALSD-R 368
Query: 294 NECR 297
CR
Sbjct: 369 RACR 372
Score = 52 (23.4 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 5 CIPPFENAAFSASVESTNTCG 25
C+P NAA V +++TCG
Sbjct: 40 CVPGLVNAALGREVLASSTCG 60
>UNIPROTKB|G3V6X3 [details] [associations]
symbol:Ntn3 "Netrin 2-like (Chicken)" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
RGD:619811 GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 EMBL:CH473948
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
OMA:TASPLCW GeneTree:ENSGT00700000104042 RefSeq:NP_446184.1
UniGene:Rn.95949 Ensembl:ENSRNOT00000009735 GeneID:114524
KEGG:rno:114524 NextBio:618679 Uniprot:G3V6X3
Length = 580
Score = 360 (131.8 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 92/265 (34%), Positives = 125/265 (47%)
Query: 37 CVQSGTHVTANTCDYCY-EDTHPVRYLTDLSNTTT--WWQSTTMYDGVQWPNQVNITLKF 93
C + HV CD + H LT T + W+S + P V +T+
Sbjct: 59 CGRPANHV----CDPSDPQRAHSADLLTSAPGTASPLCWRSDVLQRA---PFNVTLTVPL 111
Query: 94 GKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYG-LPDDNSGKAND 152
GK F++ +V L F S P S A+ K SW P F+S+SC YG LP G A
Sbjct: 112 GKAFELVFVSLRFCSAPPTSVALLKSQDHGRSWVPLGFFSSSCSLDYGRLPAPADGPAGP 171
Query: 153 SDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNT 212
C P GG + F+ +G + + LQ++VTAT+IRI L R
Sbjct: 172 GP-EALCFPA-PQAQPDGGGLLAFSVQDGSPQGLDLDNSPVLQDWVTATDIRIVLTRPAI 229
Query: 213 FYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGP 272
D D V Y Y+ ++ VG RCKCNGH+S C + + G VC C+H T GP
Sbjct: 230 QGDTR--DGGVTVPYSYSATELQVGGRCKCNGHSSRC--LMDTHGHL--VCDCQHGTEGP 283
Query: 273 DCNECAPFYNDAPWRRAS-DDANEC 296
DC+ C PFY D PW+RA+ +A+ C
Sbjct: 284 DCSRCKPFYCDRPWQRATGQEAHAC 308
Score = 109 (43.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 28/64 (43%), Positives = 31/64 (48%)
Query: 240 CKCNGHASECPY----VRQSDGSTRRVC-RCEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
C CNGHA C + R S + VC C HNTAG C+ C FY D P R SD
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRD-PGRVLSD-R 368
Query: 294 NECR 297
CR
Sbjct: 369 RACR 372
Score = 49 (22.3 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 CIPPFENAAFSASVESTNTCGYQ-NGVPQPT 34
C P NAA V +++TCG N V P+
Sbjct: 40 CTPGLVNAALGREVLASSTCGRPANHVCDPS 70
>MGI|MGI:99892 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005608
"laminin-3 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IDA] [GO:0009888 "tissue
development" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043256
"laminin complex" evidence=IDA] [GO:0045198 "establishment of
epithelial cell apical/basal polarity" evidence=IMP] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IMP] [GO:0061304 "retinal blood vessel
morphogenesis" evidence=IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99892 GO:GO:0030155 GO:GO:0007155
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 Reactome:REACT_127416 GO:GO:0007166
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 Pfam:PF02210 GO:GO:0045198 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
EMBL:J04064 EMBL:X07737 EMBL:X13459 EMBL:M36775 IPI:IPI00113726
PIR:A31771 RefSeq:NP_032506.2 UniGene:Mm.303386 PDB:2JD4
PDBsum:2JD4 ProteinModelPortal:P19137 SMR:P19137 MINT:MINT-2635122
STRING:P19137 PhosphoSite:P19137 PaxDb:P19137 PRIDE:P19137
GeneID:16772 KEGG:mmu:16772 UCSC:uc008dkh.1 InParanoid:P19137
EvolutionaryTrace:P19137 NextBio:290602 CleanEx:MM_LAMA1
Genevestigator:P19137 GermOnline:ENSMUSG00000032796 Uniprot:P19137
Length = 3084
Score = 389 (142.0 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 103/313 (32%), Positives = 152/313 (48%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCY------EDTHP 58
P N A +A + + TCG + G P+ V+ G V C C + HP
Sbjct: 31 PAILNLATNAHISANATCG-EKG-PEMFCKLVEHVPGRPVRHAQCRVCDGNSTNPRERHP 88
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-PRPESFAIY 117
+ + D T WWQS ++ +G ++ + V +TL + F V Y+ + + PRP ++ I
Sbjct: 89 ISHAID--GTNNWWQSPSIQNGREY-HWVTVTLDLRQVFQVAYIIIKAANAPRPGNW-IL 144
Query: 118 KKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+++ + + P+Q+Y+ S C Y + +D V CTS YS L PL G +
Sbjct: 145 ERSVDGVKFKPWQYYAVSDTECLTRYKITPRRGPPTYRADNEVICTSYYSKLVPLEHGEI 204
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF---------LDPSVLR 225
+ + GR A S L EF +A IR+ L R+ T +L LDP V R
Sbjct: 205 HTSLINGRPSADDPSPQL--LEFTSARYIRLRLQRIRTLNADLMTLSHRDLRDLDPIVTR 262
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYNDA 284
Y+Y+I DISVG C C GHAS CP+ D +++ C+CEHNT G C+ C P Y+
Sbjct: 263 RYYYSIKDISVGGMCICYGHASSCPW----DEEAKQLQCQCEHNTCGESCDRCCPGYHQQ 318
Query: 285 PWRRAS-DDANEC 296
PWR + NEC
Sbjct: 319 PWRPGTISSGNEC 331
Score = 47 (21.6 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 267 HNTAGPD--CNECAPFYNDAPWRRASD 291
H T G + C++CAP Y+ + R +D
Sbjct: 814 HLTDGEEVVCDQCAPGYSGSWCERCAD 840
>UNIPROTKB|F1MEG3 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007166 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GO:GO:0002011 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0061304 OMA:EPFYWRL
GO:GO:0005606 GO:GO:0005608 EMBL:DAAA02056788 EMBL:DAAA02056789
EMBL:DAAA02056790 EMBL:DAAA02056791 EMBL:DAAA02056792
IPI:IPI01000434 Ensembl:ENSBTAT00000024169 Uniprot:F1MEG3
Length = 3031
Score = 390 (142.3 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
Identities = 103/317 (32%), Positives = 152/317 (47%)
Query: 3 NRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYC-------Y 53
N P N A +A + + TCG + G P+ V+ G + C C
Sbjct: 20 NGLFPAILNLASNAHISTNATCG-EKG-PETYCKLVEHVPGRAMRNAQCRVCDGSSANPK 77
Query: 54 EDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-PRPE 112
+ HP+ D T WWQS ++ +G ++ + V ITL + F V YV + + PRP
Sbjct: 78 AERHPISNAID--GTNNWWQSPSIQNGREY-HWVTITLDLRQVFQVAYVIIKAANAPRPG 134
Query: 113 SFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPL 169
++ I +++ + ++P+Q+Y+ S C Y + +D V CTS YS L PL
Sbjct: 135 NW-ILERSVDGVKFSPWQYYAVSDTECLTHYNITPRRGPPTYRADDEVICTSYYSRLVPL 193
Query: 170 TGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF---------LD 220
G + + + GR + S L +F +A IR+ L R+ T +L LD
Sbjct: 194 EHGEIHTSLINGRPSSDDLSPKL--LDFTSARYIRLRLQRIRTLNADLMTLSHRDPKDLD 251
Query: 221 PSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPF 280
P V R Y+Y+I DISVG C C GHAS CP+ +G+ + C+CEHNT G CN C P
Sbjct: 252 PIVTRRYYYSIKDISVGGMCICYGHASSCPW---DEGTKKFQCQCEHNTCGDRCNRCCPG 308
Query: 281 YNDAPWRRAS-DDANEC 296
Y+ PWR + N C
Sbjct: 309 YHQQPWRPGTVSSGNTC 325
Score = 44 (20.5 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 268 NTAGPDCNECAP-FYN 282
N G C+ C P FYN
Sbjct: 431 NVEGSHCDRCKPGFYN 446
Score = 38 (18.4 bits), Expect = 8.9e-35, Sum P(2) = 8.9e-35
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 274 CNECAPFYNDAPW-RRASD 291
C++CAP Y W R +D
Sbjct: 771 CDQCAPGYM-GDWCERCAD 788
>RGD|1307207 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10116 "Rattus
norvegicus" [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO] [GO:0005606 "laminin-1 complex"
evidence=IEA;ISO] [GO:0005608 "laminin-3 complex" evidence=IEA;ISO]
[GO:0005615 "extracellular space" evidence=IEA;ISO] [GO:0005911
"cell-cell junction" evidence=IEA;ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009888 "tissue development" evidence=ISO] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IEA;ISO] [GO:0043208 "glycosphingolipid binding"
evidence=IEA;ISO] [GO:0043256 "laminin complex" evidence=ISO]
[GO:0045198 "establishment of epithelial cell apical/basal
polarity" evidence=IEA;ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA;ISO]
[GO:0060445 "branching involved in salivary gland morphogenesis"
evidence=IEA;ISO] [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA;ISO] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 RGD:1307207 GO:GO:0005615 GO:GO:0030155
GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0031175 GO:GO:0060441 GO:GO:0060445 Pfam:PF02210
GO:GO:0045198 GO:GO:0045995 GO:GO:0005201 GO:GO:0043208
GO:GO:0002011 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
GO:GO:0005608 EMBL:AB425340 IPI:IPI00363534 RefSeq:NP_001101707.2
UniGene:Rn.2807 Ensembl:ENSRNOT00000023226 GeneID:316758
KEGG:rno:316758 UCSC:RGD:1307207 NextBio:671215 Uniprot:D4A409
Length = 3083
Score = 387 (141.3 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 102/313 (32%), Positives = 154/313 (49%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCY------EDTHP 58
P N A +A + + TCG + G P+ V+ G V C C + HP
Sbjct: 31 PAILNLATNAHISANATCG-EKG-PEMFCKLVEHVPGRPVRHAQCRVCDGNSTNPRERHP 88
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-PRPESFAIY 117
+ + D T WWQS ++ +G ++ + V +TL + F V YV + + PRP ++ I
Sbjct: 89 ITHAID--GTNNWWQSPSIQNGREY-HWVTVTLDLRQVFQVAYVIIKAANAPRPGNW-IL 144
Query: 118 KKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+++ + + P+Q+Y+ S C Y + +D V CTS YS L PL G +
Sbjct: 145 ERSVDGVKFRPWQYYAVSDTECLTRYKITPRRGPPTYRADNEVICTSYYSKLVPLEHGEI 204
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF---------LDPSVLR 225
+ + GR A S L EF +A IR+ L R+ T +L LDP V R
Sbjct: 205 HTSLINGRPSADDPSPQL--LEFTSARYIRLRLQRIRTLNADLMTLSHRDLRDLDPIVTR 262
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYNDA 284
Y+Y+I DISVG C C+GHAS CP+ D +++ C+CEHNT G C+ C P ++
Sbjct: 263 RYYYSIKDISVGGMCICSGHASSCPW----DEEAKQLQCQCEHNTCGESCDRCCPGFHQQ 318
Query: 285 PWRRAS-DDANEC 296
PWR + +N+C
Sbjct: 319 PWRPGTISSSNQC 331
Score = 46 (21.3 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 274 CNECAPFYNDAPWRRASD 291
C++CAP Y+ A R +D
Sbjct: 823 CDQCAPGYSGAWCERCAD 840
>RGD|1308889 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005605 "basal lamina"
evidence=ISO;IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0022011 "myelination in peripheral
nervous system" evidence=IEP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEP] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=ISO] [GO:0042383
"sarcolemma" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:1308889 GO:GO:0007411 GO:GO:0030155 GO:GO:0043197
GO:GO:0030198 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 GO:GO:0022011 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 IPI:IPI00361301
PRIDE:F1M614 Ensembl:ENSRNOT00000014917 ArrayExpress:F1M614
Uniprot:F1M614
Length = 3085
Score = 369 (135.0 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 97/301 (32%), Positives = 151/301 (50%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCYEDT-HPV-RY- 61
P N A +A + + TCG + G P+ V+ G V C C +++ HP R+
Sbjct: 4 PAVLNLASNALITTNATCG-EKG-PEMYCKLVEHVPGQPVRNPQCRICNQNSSHPYQRHP 61
Query: 62 LTD-LSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFAIYKK 119
+T+ + TWWQS ++ +GV++ + V ITL + F + YV + SPRP ++ I ++
Sbjct: 62 ITNAIDGKNTWWQSPSIKNGVEY-HYVTITLDLQQVFQIAYVIVKAANSPRPGNW-ILER 119
Query: 120 TYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPF 176
+ ++ + P+Q+++ + C Y + + D V CTS YS + PL G +
Sbjct: 120 SLDDEEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIHPLENGEIHI 179
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL---------DPSVLRSY 227
+ + GR A S L EF +A IR+ R+ T +L + DP V R Y
Sbjct: 180 SLINGRPSADDPSPEL--LEFTSARYIRLRFQRIRTLNADLMMFAHKDPREIDPIVTRRY 237
Query: 228 FYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYNDAPW 286
+Y++ DISVG C C GHA CP D +T + C CEHNT G C+ C P ++ PW
Sbjct: 238 YYSVKDISVGGMCICYGHARACPL----DPATNKSRCECEHNTCGESCDRCCPGFHQKPW 293
Query: 287 R 287
R
Sbjct: 294 R 294
Score = 56 (24.8 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 263 CRCEHNTAGPDCNECA-PFYN 282
C C+ N G DC+ C F+N
Sbjct: 449 CSCKENVEGEDCSHCKFGFFN 469
Score = 48 (22.0 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 263 CRCEHNTAGPDCNECAP 279
C C+ N G C+ C P
Sbjct: 1097 CTCKVNVEGVHCDRCRP 1113
Score = 48 (22.0 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 11/36 (30%), Positives = 12/36 (33%)
Query: 261 RVCRCEHNTAGPDCNECAPFYNDAPWRRASDDANEC 296
R C G C CAP Y +P EC
Sbjct: 1456 RCTACPRGYEGQYCERCAPGYAGSP-SSPGGSCQEC 1490
Score = 47 (21.6 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 263 CRCEHNTAGPDCNECAP-FY 281
C C +G C CAP FY
Sbjct: 1343 CDCPPGYSGLSCETCAPGFY 1362
Score = 41 (19.5 bits), Expect = 7.3e-33, Sum P(2) = 7.3e-33
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 263 CRCEHNTAGPDCNEC 277
C C +G C+EC
Sbjct: 1042 CSCHPKFSGMKCSEC 1056
>UNIPROTKB|F1P4C0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 OMA:RSQDFGK GO:GO:0060668
EMBL:AADN02005946 EMBL:AADN02005947 EMBL:AADN02005948
EMBL:AADN02005949 EMBL:AADN02005950 IPI:IPI00573187
Ensembl:ENSGALT00000018613 ArrayExpress:F1P4C0 Uniprot:F1P4C0
Length = 603
Score = 340 (124.7 bits), Expect = 3.3e-34, Sum P(2) = 3.3e-34
Identities = 96/306 (31%), Positives = 136/306 (44%)
Query: 2 DNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCV--QSGT-HVTANTCDYCYED--- 55
+ C P N A ++ + CG P FC + T TC +C
Sbjct: 7 EKACNPRLGNLAHGRTLRTETACGSHAAEP----FCAYAEDATLRCKPPTCGHCSGAHAG 62
Query: 56 -THPVRYLTD--LSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPE 112
HP + D TWWQ+ D P Q I L TF T++ L+F SPRP
Sbjct: 63 LAHPPAAMADSPFRLPRTWWQAAG--DA---P-QETIQLDLEATFYFTHLILVFKSPRPA 116
Query: 113 SFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
+ + + +W +++++ +C T+GL DD + CTS YS P TGG
Sbjct: 117 AMVLERSQDFGKTWQAYKYFATNCSATFGLEDDVVRRGAP------CTSRYSSPFPCTGG 170
Query: 173 AVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITL-DRLNTFYDELFLDPSVLRSYFYAI 231
V + L + AK Y+ Q + T +R+ L +R + L +P L + +YA+
Sbjct: 171 EVIYRALSPPHAAKD-PYSTEAQAQLKVTNLRVRLLERQSCPCHPL--EPPALPAPYYAV 227
Query: 232 ADISVGARCKCNGHASECPYVR-----QSDGSTRRV---CRCEHNTAGPDCNECAPFYND 283
D V C CNGHA C VR ++ G+ V C C+HNTAGP C CAP YND
Sbjct: 228 YDFIVKGSCFCNGHADHCVPVRGFRPVRAAGAFHVVHGKCMCKHNTAGPHCQHCAPLYND 287
Query: 284 APWRRA 289
PW+ A
Sbjct: 288 RPWQAA 293
Score = 59 (25.8 bits), Expect = 3.3e-34, Sum P(2) = 3.3e-34
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 263 CRCEHNTAGPDCNECAPFY 281
C C+ AGP C+ C P Y
Sbjct: 394 CPCKPGVAGPRCDRCLPGY 412
>UNIPROTKB|F1PEZ5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AAEX03000448
EMBL:AAEX03000449 EMBL:AAEX03000450 EMBL:AAEX03000451
EMBL:AAEX03000452 EMBL:AAEX03000453 Ensembl:ENSCAFT00000036090
Uniprot:F1PEZ5
Length = 3085
Score = 361 (132.1 bits), Expect = 5.2e-34, Sum P(2) = 5.2e-34
Identities = 95/302 (31%), Positives = 147/302 (48%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCYEDT------HP 58
P N A +A + + TCG + G P+ V+ G V C C +++ HP
Sbjct: 4 PAVLNLASNALITTNATCG-EKG-PEMYCKLVEHVPGQPVRNPQCRICNQNSSNPYQRHP 61
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFAIY 117
+ D NT WWQS ++ +G+++ + V ITL + F + YV + SPRP ++ I
Sbjct: 62 ITNAIDGKNT--WWQSPSIKNGIEY-HYVTITLDLQQVFQIAYVIVKAANSPRPGNW-IL 117
Query: 118 KKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+++ + + P+Q+++ + C Y + + D V CTS YS + PL G +
Sbjct: 118 ERSLDGVDYRPWQYHAVTDTECLALYNIYPRTGPPSYAKDDEVICTSFYSKIHPLENGEI 177
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL---------DPSVLR 225
+ + GR A S L EF +A IR+ R+ T +L + DP V R
Sbjct: 178 HISLINGRPSADDPSPEL--LEFTSARYIRLRFQRIRTLNADLMMFAHKDPREIDPIVTR 235
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAP 285
Y+Y++ DISVG C C GHA CP ++ S C CEHNT G C++C P ++ P
Sbjct: 236 RYYYSVKDISVGGMCICYGHARACPLDPVTNKSR---CECEHNTCGDSCDQCCPGFHQKP 292
Query: 286 WR 287
WR
Sbjct: 293 WR 294
Score = 60 (26.2 bits), Expect = 5.2e-34, Sum P(2) = 5.2e-34
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 263 CRCEHNTAGPDCNEC-APFYN 282
C C+ N G DC C A F+N
Sbjct: 449 CNCKENVEGGDCGRCKAGFFN 469
Score = 47 (21.6 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAP 285
C C+ G C+ CA Y P
Sbjct: 405 CHCKPGFRGVSCDRCARGYTGYP 427
Score = 45 (20.9 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 263 CRCEHNTAGPDCNECAP-FY 281
C C +G C C P FY
Sbjct: 1343 CECPAGHSGLSCEACGPGFY 1362
Score = 44 (20.5 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 10/34 (29%), Positives = 11/34 (32%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAPWRRASDDANEC 296
C C +G C EC N W EC
Sbjct: 1042 CSCHPKFSGAKCTEC----NQGHWNYPHCSPCEC 1071
Score = 43 (20.2 bits), Expect = 3.1e-32, Sum P(2) = 3.1e-32
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 265 CEHNTAGPDCNECAPFYNDAP 285
C GP C+ CA Y P
Sbjct: 798 CPAGYTGPRCDRCAEGYFGQP 818
>UNIPROTKB|F1PVY5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:AAEX03000448 EMBL:AAEX03000449 EMBL:AAEX03000450
EMBL:AAEX03000451 EMBL:AAEX03000452 EMBL:AAEX03000453
Ensembl:ENSCAFT00000001697 Uniprot:F1PVY5
Length = 3109
Score = 361 (132.1 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 95/302 (31%), Positives = 147/302 (48%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCYEDT------HP 58
P N A +A + + TCG + G P+ V+ G V C C +++ HP
Sbjct: 9 PAVLNLASNALITTNATCG-EKG-PEMYCKLVEHVPGQPVRNPQCRICNQNSSNPYQRHP 66
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFAIY 117
+ D NT WWQS ++ +G+++ + V ITL + F + YV + SPRP ++ I
Sbjct: 67 ITNAIDGKNT--WWQSPSIKNGIEY-HYVTITLDLQQVFQIAYVIVKAANSPRPGNW-IL 122
Query: 118 KKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+++ + + P+Q+++ + C Y + + D V CTS YS + PL G +
Sbjct: 123 ERSLDGVDYRPWQYHAVTDTECLALYNIYPRTGPPSYAKDDEVICTSFYSKIHPLENGEI 182
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL---------DPSVLR 225
+ + GR A S L EF +A IR+ R+ T +L + DP V R
Sbjct: 183 HISLINGRPSADDPSPEL--LEFTSARYIRLRFQRIRTLNADLMMFAHKDPREIDPIVTR 240
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAP 285
Y+Y++ DISVG C C GHA CP ++ S C CEHNT G C++C P ++ P
Sbjct: 241 RYYYSVKDISVGGMCICYGHARACPLDPVTNKSR---CECEHNTCGDSCDQCCPGFHQKP 297
Query: 286 WR 287
WR
Sbjct: 298 WR 299
Score = 60 (26.2 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 263 CRCEHNTAGPDCNEC-APFYN 282
C C+ N G DC C A F+N
Sbjct: 454 CNCKENVEGGDCGRCKAGFFN 474
Score = 47 (21.6 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAP 285
C C+ G C+ CA Y P
Sbjct: 410 CHCKPGFRGVSCDRCARGYTGYP 432
Score = 45 (20.9 bits), Expect = 2.0e-32, Sum P(2) = 2.0e-32
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 263 CRCEHNTAGPDCNECAP-FY 281
C C +G C C P FY
Sbjct: 1366 CECPAGHSGLSCEACGPGFY 1385
Score = 44 (20.5 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 10/34 (29%), Positives = 11/34 (32%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAPWRRASDDANEC 296
C C +G C EC N W EC
Sbjct: 1065 CSCHPKFSGAKCTEC----NQGHWNYPHCSPCEC 1094
Score = 43 (20.2 bits), Expect = 3.2e-32, Sum P(2) = 3.2e-32
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 265 CEHNTAGPDCNECAPFYNDAP 285
C GP C+ CA Y P
Sbjct: 821 CPAGYTGPRCDRCAEGYFGQP 841
>UNIPROTKB|F1PJ02 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 OMA:EPFYWRL GO:GO:0005606
EMBL:AAEX03005489 EMBL:AAEX03005490 EMBL:AAEX03005491
Ensembl:ENSCAFT00000029520 Uniprot:F1PJ02
Length = 3034
Score = 387 (141.3 bits), Expect = 5.4e-34, P = 5.4e-34
Identities = 91/258 (35%), Positives = 137/258 (53%)
Query: 54 EDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-PRPE 112
++ HP+ D T WWQS ++ +G ++ + V ITL + F V YV + + PRP
Sbjct: 30 KERHPISNAID--GTNNWWQSPSIQNGREY-HWVTITLDLRQVFQVAYVIIKAANAPRPG 86
Query: 113 SFAIYKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPL 169
++ I +++ + ++++P+Q+Y+ S C Y + +D V CTS YS L PL
Sbjct: 87 NW-ILERSLDGTTFSPWQYYAVSDTECLTRYNITPRRGPPTYRADDEVICTSYYSRLVPL 145
Query: 170 TGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF---------LD 220
G + + + GR A S L EF +A IR+ L R+ T +L LD
Sbjct: 146 EHGEIHTSLINGRPSADDLSPKL--LEFTSARYIRLRLQRIRTLNADLMTLSHRDPIDLD 203
Query: 221 PSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAP 279
P V R Y+Y+I DIS+G C C GHAS CP+ D +T+++ C+CEHNT G C+ C P
Sbjct: 204 PIVTRRYYYSIKDISIGGMCICYGHASSCPW----DETTKKLQCQCEHNTCGESCSRCCP 259
Query: 280 FYNDAPWRRASDDA-NEC 296
Y+ PWR + A N C
Sbjct: 260 GYHQQPWRPGTVSAGNTC 277
>UNIPROTKB|F1P420 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0032224
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:NCNSFGS EMBL:AADN02049678 EMBL:AADN02049679 EMBL:AADN02049680
EMBL:AADN02049681 EMBL:AADN02049682 EMBL:AADN02049683
EMBL:AADN02049684 EMBL:AADN02049685 EMBL:AADN02049686
EMBL:AADN02049687 EMBL:AADN02049688 EMBL:AADN02049689
EMBL:AADN02049690 EMBL:AADN02049691 EMBL:AADN02049692
EMBL:AADN02049693 EMBL:AADN02049694 EMBL:AADN02049695
EMBL:AADN02049696 EMBL:AADN02049697 EMBL:AADN02049698
EMBL:AADN02049699 EMBL:AADN02049700 EMBL:AADN02049701
EMBL:AADN02049702 EMBL:AADN02049703 EMBL:AADN02049704
EMBL:AADN02049705 EMBL:AADN02049706 EMBL:AADN02049707
IPI:IPI00582275 Ensembl:ENSGALT00000022704 Uniprot:F1P420
Length = 3090
Score = 364 (133.2 bits), Expect = 6.3e-34, Sum P(3) = 6.3e-34
Identities = 96/301 (31%), Positives = 142/301 (47%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCV----QSGTHVTANTCDY---CYEDTHPV 59
P N A +A + + TCG + G + Q + CD HP+
Sbjct: 3 PAVLNLATNALITTNATCG-EKGREMYCKLVEHVPGQPARNPQCRICDQRSRVLHQRHPI 61
Query: 60 RYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFAIYK 118
D NT WWQS ++ +G+++ + V ITL + F + YV + SPRP ++ I +
Sbjct: 62 TNAIDGKNT--WWQSPSIQNGIEY-HYVTITLDLQQIFQIAYVIVKAANSPRPGNW-ILE 117
Query: 119 KTYENSSWTPFQFYS---ASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVP 175
++ + + P+Q+Y+ + C Y + + D V CTS YS + PL G +
Sbjct: 118 RSLDGVDYQPWQYYAITDSECLTRYNIHPRPGTPSYMKDDEVICTSYYSKIHPLENGEIH 177
Query: 176 FATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL---------DPSVLRS 226
+ + GR A S L EF +A IR+ R+ T +L + DP V R
Sbjct: 178 TSLINGRPSADDPSRTL--LEFTSARFIRLRFQRIRTLNADLMMFAHKDPTEIDPIVTRR 235
Query: 227 YFYAIADISVGARCKCNGHASECPYVRQSDGSTRR-VCRCEHNTAGPDCNECAPFYNDAP 285
Y+Y+I DISVG C C+GHA CP D T + VC+CEHNT G C+ C P +N P
Sbjct: 236 YYYSIKDISVGGMCICSGHAKACPL----DPVTNKSVCQCEHNTCGETCDRCCPGFNQKP 291
Query: 286 W 286
W
Sbjct: 292 W 292
Score = 47 (21.6 bits), Expect = 6.3e-34, Sum P(3) = 6.3e-34
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 262 VCRCEHNTAGPDCNEC-APFYN 282
+C C+ + G +C+ C + F+N
Sbjct: 447 LCVCKEHVEGENCDRCKSGFFN 468
Score = 45 (20.9 bits), Expect = 9.4e-33, Sum P(2) = 9.4e-33
Identities = 11/39 (28%), Positives = 13/39 (33%)
Query: 258 STRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDANEC 296
S R C G C C+P Y P + EC
Sbjct: 1455 SDYRCTACPPGYEGQYCERCSPGYTGNP-QTPGGSCQEC 1492
Score = 44 (20.5 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 263 CRCEHNTAGPDCNECAP-FY 281
C C +G C C+P FY
Sbjct: 1345 CDCPLGYSGLSCESCSPGFY 1364
Score = 43 (20.2 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAP 285
C C +G C EC Y + P
Sbjct: 1042 CFCRPEFSGDKCTECRSGYWNYP 1064
Score = 42 (19.8 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 263 CRCEHNTAGPDCNEC 277
C C+ N G C+ C
Sbjct: 1097 CSCKVNVEGVHCDRC 1111
Score = 41 (19.5 bits), Expect = 2.6e-33, Sum P(3) = 2.6e-33
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 262 VCRCEHNTAGPDCNECAP 279
+C C AG C C P
Sbjct: 686 LCDCPPGYAGTSCEYCWP 703
Score = 37 (18.1 bits), Expect = 6.3e-34, Sum P(3) = 6.3e-34
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 283 DAPWRRASDDANECR 297
D W+R +DD+ R
Sbjct: 1273 DFTWKRYADDSRRSR 1287
>UNIPROTKB|F1N8P9 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00823129
Ensembl:ENSGALT00000023564 ArrayExpress:F1N8P9 Uniprot:F1N8P9
Length = 3060
Score = 386 (140.9 bits), Expect = 7.0e-34, P = 7.0e-34
Identities = 105/313 (33%), Positives = 153/313 (48%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCY------EDTHP 58
P N A +A + + TCG + G P+ V+ G + + C C ++ HP
Sbjct: 5 PAILNLASNAHISTNATCG-EKG-PEMFCKLVEHVPGRPLRNSQCRVCDRHSANPKEQHP 62
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-PRPESFAIY 117
+ D T WWQS ++ +G Q+ + V ITL + F V YV + + PRP ++ I
Sbjct: 63 ISSAID--GTNNWWQSPSIQNGRQY-HWVTITLDLRQVFQVAYVIIKSANAPRPGNW-IL 118
Query: 118 KKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+++ + + + P+Q+Y+ S C Y + D V CTS YS L PL G +
Sbjct: 119 ERSIDGTEFKPWQYYAISDTECLTRYNITPRVGPPTYKRDDEVICTSYYSRLVPLEHGEI 178
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF---------LDPSVLR 225
+ + GR A S L +F +A IR+ L R+ T +L LDP V R
Sbjct: 179 HTSLINGRPSADDPSQKL--LDFTSARYIRLRLQRIRTLNADLMTLSHHDPKELDPIVTR 236
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYNDA 284
Y+Y+I DISVG C C GHA CP D T+++ C+CEHNT G CN C P Y+
Sbjct: 237 RYYYSIKDISVGGMCICYGHARSCPL----DEITKKLQCQCEHNTCGESCNRCCPGYHQK 292
Query: 285 PWRRASDDA-NEC 296
PWR + A N+C
Sbjct: 293 PWRPGTISAGNKC 305
>UNIPROTKB|F1NM47 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005608 "laminin-3 complex" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
OMA:EPFYWRL GO:GO:0005606 GO:GO:0005608 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00587004
Ensembl:ENSGALT00000036890 ArrayExpress:F1NM47 Uniprot:F1NM47
Length = 3061
Score = 386 (140.9 bits), Expect = 7.0e-34, P = 7.0e-34
Identities = 105/313 (33%), Positives = 153/313 (48%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCY------EDTHP 58
P N A +A + + TCG + G P+ V+ G + + C C ++ HP
Sbjct: 5 PAILNLASNAHISTNATCG-EKG-PEMFCKLVEHVPGRPLRNSQCRVCDRHSANPKEQHP 62
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-PRPESFAIY 117
+ D T WWQS ++ +G Q+ + V ITL + F V YV + + PRP ++ I
Sbjct: 63 ISSAID--GTNNWWQSPSIQNGRQY-HWVTITLDLRQVFQVAYVIIKSANAPRPGNW-IL 118
Query: 118 KKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+++ + + + P+Q+Y+ S C Y + D V CTS YS L PL G +
Sbjct: 119 ERSIDGTEFKPWQYYAISDTECLTRYNITPRVGPPTYKRDDEVICTSYYSRLVPLEHGEI 178
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF---------LDPSVLR 225
+ + GR A S L +F +A IR+ L R+ T +L LDP V R
Sbjct: 179 HTSLINGRPSADDPSQKL--LDFTSARYIRLRLQRIRTLNADLMTLSHHDPKELDPIVTR 236
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYNDA 284
Y+Y+I DISVG C C GHA CP D T+++ C+CEHNT G CN C P Y+
Sbjct: 237 RYYYSIKDISVGGMCICYGHARSCPL----DEITKKLQCQCEHNTCGESCNRCCPGYHQK 292
Query: 285 PWRRASDDA-NEC 296
PWR + A N+C
Sbjct: 293 PWRPGTISAGNKC 305
>UNIPROTKB|Q9Y2I2 [details] [associations]
symbol:NTNG1 "Netrin-G1" species:9606 "Homo sapiens"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0046658 "anchored to plasma
membrane" evidence=ISS] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 Orphanet:3095 PDB:3ZYJ
PDBsum:3ZYJ EMBL:AB023193 EMBL:AY358365 EMBL:BX538348 EMBL:AL590427
EMBL:AL513187 EMBL:AC114491 EMBL:BC030220 IPI:IPI00412988
IPI:IPI00412989 IPI:IPI00477903 IPI:IPI00478407 IPI:IPI00478746
IPI:IPI00479203 RefSeq:NP_001106697.1 RefSeq:NP_001106699.1
RefSeq:NP_055732.2 UniGene:Hs.732535 ProteinModelPortal:Q9Y2I2
SMR:Q9Y2I2 STRING:Q9Y2I2 PhosphoSite:Q9Y2I2 DMDM:57015420
PRIDE:Q9Y2I2 DNASU:22854 Ensembl:ENST00000294649
Ensembl:ENST00000370065 Ensembl:ENST00000370066
Ensembl:ENST00000370067 Ensembl:ENST00000370068
Ensembl:ENST00000370071 Ensembl:ENST00000370073
Ensembl:ENST00000370074 Ensembl:ENST00000370076 GeneID:22854
KEGG:hsa:22854 UCSC:uc001dvc.4 UCSC:uc001dvd.1 UCSC:uc001dvf.4
UCSC:uc001dvh.4 CTD:22854 GeneCards:GC01P107682 HGNC:HGNC:23319
MIM:608818 neXtProt:NX_Q9Y2I2 PharmGKB:PA164742200 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 OMA:YCECFGH ChiTaRS:NTNG1
GenomeRNAi:22854 NextBio:43337 ArrayExpress:Q9Y2I2 Bgee:Q9Y2I2
CleanEx:HS_NTNG1 Genevestigator:Q9Y2I2 GermOnline:ENSG00000162631
Uniprot:Q9Y2I2
Length = 539
Score = 368 (134.6 bits), Expect = 8.9e-34, P = 8.9e-34
Identities = 97/280 (34%), Positives = 132/280 (47%)
Query: 29 GVPQPTRFCVQSGTHVTANTCDYCYED-THPVRYLTDLS--NTTTWWQSTTMYDGVQWPN 85
G P P FC ++ N CD + HP + D + +T+WQS T + + P
Sbjct: 73 GDP-PETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPK-PL 130
Query: 86 QVNITLKFGKTFDVT-YVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPD 144
QVNITL + KT ++T + + F S RP+ + K +W P+Q+Y+ C + + + D
Sbjct: 131 QVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHM-D 189
Query: 145 DNSGKANDSDT--RVFCTSEYSDLSPLTGGAVPF------ATLEG-RYRAKTFSYNL--- 192
S K T + CT EYS + F A G R R Y
Sbjct: 190 PKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDT 249
Query: 193 --NLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECP 250
L++F T T++RI L L E+F+D L YFYAI+DI V RCKCN HA+ C
Sbjct: 250 TKKLRDFFTVTDLRIRL--LRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATVCV 307
Query: 251 YVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
Y D S + C CEHNT GPDC +C Y PW S
Sbjct: 308 Y----DNS-KLTCECEHNTTGPDCGKCKKNYQGRPWSPGS 342
>ZFIN|ZDB-GENE-060118-1 [details] [associations]
symbol:lama1 "laminin, alpha 1" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0030903 "notochord development"
evidence=IMP] [GO:0048514 "blood vessel morphogenesis"
evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IGI;IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-060118-1 GO:GO:0001764 GO:GO:0030155 GO:GO:0048514
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043010 GO:GO:0030334
GO:GO:0008045 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031290 Pfam:PF02210
GO:GO:0045995 GO:GO:0030903 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0007634
CTD:284217 HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB
GO:GO:0005606 EMBL:DQ131910 IPI:IPI00492896 RefSeq:NP_001030158.1
UniGene:Dr.94156 ProteinModelPortal:Q45H72 SMR:Q45H72 STRING:Q45H72
GeneID:569971 KEGG:dre:569971 NextBio:20889926 Uniprot:Q45H72
Length = 3075
Score = 385 (140.6 bits), Expect = 9.0e-34, P = 9.0e-34
Identities = 103/313 (32%), Positives = 151/313 (48%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCY------EDTHP 58
P N A +A + + TCG + P+ V+ G + C C ++ HP
Sbjct: 31 PAILNLASNAEISTNATCGDPD--PEMFCKLVEHVPGRRIRNPQCRICDANSQNPKEQHP 88
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFAIY 117
+ D T WWQS ++ +G Q+ + V +TL + F V Y+ + SPRP ++ I
Sbjct: 89 ITNAID--GTNLWWQSPSIKNGRQF-HWVTVTLDLRQVFQVAYIIIKAANSPRPGNW-IL 144
Query: 118 KKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+++ + ++ P+QFY+ S C Y + D V CTS YS L PL G +
Sbjct: 145 ERSLDGVNFQPWQFYAISDTECLTRYNITPRIGPPTYKRDDEVICTSYYSRLVPLEHGEI 204
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF---------LDPSVLR 225
+ + GR A + L EF +A IR+ L R+ T +L +DP V R
Sbjct: 205 HTSLINGRPSADDLTPEL--LEFTSARFIRLRLQRIRTLNADLMTLSYRDPKDVDPIVTR 262
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYNDA 284
Y+Y+I DISVG C C GHA CP+ D T+++ C CEHNT G CNEC P Y+
Sbjct: 263 RYYYSIKDISVGGMCICYGHAQSCPW----DPVTKKLQCVCEHNTCGESCNECCPGYHQE 318
Query: 285 PWRRAS-DDANEC 296
PW+ + D N C
Sbjct: 319 PWQPGTLSDGNTC 331
>UNIPROTKB|O00634 [details] [associations]
symbol:NTN3 "Netrin-3" species:9606 "Homo sapiens"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0042692 "muscle cell
differentiation" evidence=TAS] [GO:0051149 "positive regulation of
muscle cell differentiation" evidence=TAS] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005794 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0005578 PROSITE:PS00022 GO:GO:0042692 GO:GO:0051149
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
eggNOG:NOG244580 HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 EMBL:U86759
EMBL:U86758 IPI:IPI00006193 RefSeq:NP_006172.1 UniGene:Hs.158336
ProteinModelPortal:O00634 SMR:O00634 STRING:O00634 PaxDb:O00634
PRIDE:O00634 Ensembl:ENST00000293973 GeneID:4917 KEGG:hsa:4917
UCSC:uc002cqj.3 CTD:4917 GeneCards:GC16P002521 HGNC:HGNC:8030
MIM:602349 neXtProt:NX_O00634 PharmGKB:PA164724231
InParanoid:O00634 KO:K06844 OMA:TASPLCW PhylomeDB:O00634
GenomeRNAi:4917 NextBio:18935 Bgee:O00634 CleanEx:HS_NTN3
Genevestigator:O00634 GermOnline:ENSG00000162068 Uniprot:O00634
Length = 580
Score = 341 (125.1 bits), Expect = 9.7e-34, Sum P(2) = 9.7e-34
Identities = 82/244 (33%), Positives = 120/244 (49%)
Query: 57 HPVRYLTDLSNTTT--WWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESF 114
H LT T + W+S ++ + P V +T+ GK F++ +V L F S P S
Sbjct: 76 HSPALLTSPGGTASPLCWRSESL---PRAPLNVTLTVPLGKAFELVFVSLRFCSAPPASV 132
Query: 115 AIYKKTYENSSWTPFQFYSASCQETYG-LPDDNSGKANDSDTRVFCTSEYSDLSPLTGGA 173
A+ K SW P F+S+ C YG LP +G A + + + P G
Sbjct: 133 ALLKSQDHGRSWAPLGFFSSHCDLDYGRLPAPANGPAGPGPEALCFPAPLAQ--PDGSGL 190
Query: 174 VPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIAD 233
+ F+ + + LQ++VTAT++R+ L R +T D ++ V Y YA D
Sbjct: 191 LAFSMQDSSPPGLDLDSSPVLQDWVTATDVRVVLTRPSTAGDPRDMEAVV--PYSYAATD 248
Query: 234 ISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-D 292
+ VG RCKCNGHAS C + + G +C C H T GPDC C PFY D PW+RA+ +
Sbjct: 249 LQVGGRCKCNGHASRC--LLDTQGHL--ICDCRHGTEGPDCGRCKPFYCDRPWQRATARE 304
Query: 293 ANEC 296
++ C
Sbjct: 305 SHAC 308
Score = 111 (44.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 28/64 (43%), Positives = 31/64 (48%)
Query: 240 CKCNGHASECPY----VRQSDGSTRRVC-RCEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
C CNGHA C + R S + VC C HNTAG C+ C FY D P R SD
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRD-PGRALSD-R 368
Query: 294 NECR 297
CR
Sbjct: 369 RACR 372
Score = 52 (23.4 bits), Expect = 9.7e-34, Sum P(2) = 9.7e-34
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 5 CIPPFENAAFSASVESTNTCG 25
C+P NAA V +++TCG
Sbjct: 40 CVPGLVNAALGREVLASSTCG 60
>MGI|MGI:1934028 [details] [associations]
symbol:Ntng1 "netrin G1" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 MGI:MGI:1934028 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:22854 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 EMBL:AB038662 EMBL:AB038663
EMBL:AB038664 EMBL:AB038665 EMBL:AB038666 EMBL:AB038667
EMBL:AF475069 EMBL:AF475070 EMBL:AF475071 EMBL:AF475072
EMBL:AF475073 EMBL:AF475074 EMBL:AF475075 EMBL:AF475076
EMBL:AF475077 EMBL:AF475078 EMBL:AK034465 EMBL:AK173075
EMBL:BC079881 IPI:IPI00323012 IPI:IPI00323015 IPI:IPI00323016
IPI:IPI00323017 IPI:IPI00354768 IPI:IPI00354771 IPI:IPI00354773
IPI:IPI00465860 IPI:IPI00469999 IPI:IPI00742371
RefSeq:NP_001156820.1 RefSeq:NP_001156821.1 RefSeq:NP_001156822.1
RefSeq:NP_001156823.1 RefSeq:NP_109624.1 RefSeq:NP_597995.1
UniGene:Mm.39262 ProteinModelPortal:Q8R4G0 SMR:Q8R4G0 STRING:Q8R4G0
PRIDE:Q8R4G0 Ensembl:ENSMUST00000072596 GeneID:80883 KEGG:mmu:80883
UCSC:uc008rai.2 UCSC:uc008raj.2 UCSC:uc008rak.2 UCSC:uc008ral.2
UCSC:uc008ram.2 UCSC:uc008rao.2 UCSC:uc008rap.1 UCSC:uc008raq.1
UCSC:uc008rar.2 InParanoid:Q8R4G0 NextBio:350195 Bgee:Q8R4G0
CleanEx:MM_NTNG1 Genevestigator:Q8R4G0
GermOnline:ENSMUSG00000059857 Uniprot:Q8R4G0
Length = 539
Score = 367 (134.2 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 97/280 (34%), Positives = 131/280 (46%)
Query: 29 GVPQPTRFCVQSGTHVTANTCDYCYED-THPVRYLTDLS--NTTTWWQSTTMYDGVQWPN 85
G P P FC ++ N CD + HP + D + +T+WQS T + + P
Sbjct: 73 GDP-PESFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPK-PL 130
Query: 86 QVNITLKFGKTFDVT-YVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPD 144
QVNITL + KT ++T + + F S RP+ + K +W P+Q+Y+ C + + D
Sbjct: 131 QVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHM-D 189
Query: 145 DNSGKANDSDT--RVFCTSEYSDLSPLTGGAVPF------ATLEG-RYRAKTFSYNL--- 192
S K T + CT EYS + F A G R R Y
Sbjct: 190 PKSVKDLSQHTVLEIICTEEYSTGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDT 249
Query: 193 --NLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECP 250
L++F T T++RI L L E+F+D L YFYAI+DI V RCKCN HA+ C
Sbjct: 250 TKKLRDFFTVTDLRIRL--LRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCL 307
Query: 251 YVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
Y D S + C CEHNT GPDC +C Y PW S
Sbjct: 308 Y----DNS-KLTCECEHNTTGPDCGKCKKNYQGRPWSPGS 342
>UNIPROTKB|A1A4H7 [details] [associations]
symbol:MGC139448 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0046658 "anchored to plasma membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:22854 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 EMBL:DAAA02007617 EMBL:DAAA02007618
EMBL:DAAA02007619 EMBL:DAAA02007620 EMBL:DAAA02007621
EMBL:DAAA02007622 EMBL:DAAA02007623 EMBL:DAAA02007624 EMBL:BC126499
IPI:IPI00829534 RefSeq:NP_001073838.1 UniGene:Bt.34180
Ensembl:ENSBTAT00000019313 GeneID:787473 KEGG:bta:787473
OMA:ELAHPPD NextBio:20928482 Uniprot:A1A4H7
Length = 461
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 96/280 (34%), Positives = 132/280 (47%)
Query: 29 GVPQPTRFCVQSGTHVTANTCDYCYED-THPVRYLTDLS--NTTTWWQSTTMYDGVQWPN 85
G P P FC ++ N CD + HP + D + +T+WQS T + + P
Sbjct: 73 GDP-PETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPK-PL 130
Query: 86 QVNITLKFGKTFDVT-YVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPD 144
QVNITL + KT ++T + + F S RP+ + K +W P+Q+Y+ C + + + D
Sbjct: 131 QVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHM-D 189
Query: 145 DNSGKANDSDT--RVFCTSEYSDLSPLTGGAVPF------ATLEG---RYRAKTFSY--- 190
S K T + CT EYS + F A G R A +
Sbjct: 190 PKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPWLRNMASLYGQLDT 249
Query: 191 NLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECP 250
L++F T T++RI L L E+F+D L YFYAI+DI V RCKCN HA+ C
Sbjct: 250 TKKLRDFFTVTDLRIRL--LRPAVGEIFVDELRLARYFYAISDIKVHGRCKCNLHATVCV 307
Query: 251 YVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
Y D S + C CEHNT GPDC +C Y PW S
Sbjct: 308 Y----DNS-KLTCECEHNTTGPDCGKCKKNYQGRPWSPGS 342
>ZFIN|ZDB-GENE-060119-1 [details] [associations]
symbol:lama2 "laminin, alpha 2" species:7955 "Danio
rerio" [GO:0030155 "regulation of cell adhesion" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0060538 "skeletal muscle organ
development" evidence=IMP] [GO:0016203 "muscle attachment"
evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-060119-1 GO:GO:0030155
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:JN786913 Uniprot:G8IHT9
Length = 3124
Score = 367 (134.2 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 100/303 (33%), Positives = 145/303 (47%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVT---ANTCD----YCYEDTH 57
P N A A +++ TCG + G P+ V+ G V TCD Y YE H
Sbjct: 26 PAVLNLASMAEIKTNATCG-ETG-PEMYCKLVEHVPGRPVKNPQCRTCDLNSDYDYE-RH 82
Query: 58 PVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFAI 116
P+ + D T WWQS ++ +G+ + V +TL + F + YV L SPRP ++ I
Sbjct: 83 PIEFAID--GTNRWWQSPSIMNGMDL-HHVTVTLDLQQVFQIAYVILKAANSPRPGNW-I 138
Query: 117 YKKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGA 173
+++ + ++ P+Q+Y+ + C Y + + D V CTS YS + PL G
Sbjct: 139 LERSLDGETFMPWQYYAITDTECITRYDIIPRTGPPSYTHDDEVICTSFYSKIHPLENGE 198
Query: 174 VPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELF---------LDPSVL 224
+ + + GR A S L F +A IR+ R+ T +L +DP V
Sbjct: 199 IHTSLINGRPSADDPSPTL--LNFTSARFIRLQFQRIRTLNADLMTLALHDPRDIDPIVT 256
Query: 225 RSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYND 283
R Y+Y+I DISVG C C GHA CP + T++ C CEHNT G C+ C P YN
Sbjct: 257 RRYYYSIKDISVGGMCICYGHAKACPL----NTHTKKFSCECEHNTCGESCDRCCPAYNQ 312
Query: 284 APW 286
PW
Sbjct: 313 KPW 315
Score = 49 (22.3 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 10/20 (50%), Positives = 10/20 (50%)
Query: 263 CRCEHNTAGPDCNECAP-FY 281
C C AG C ECA FY
Sbjct: 1357 CVCPQGYAGLSCEECAAGFY 1376
Score = 43 (20.2 bits), Expect = 7.5e-33, Sum P(2) = 7.5e-33
Identities = 6/15 (40%), Positives = 7/15 (46%)
Query: 263 CRCEHNTAGPDCNEC 277
C C+ N G C C
Sbjct: 1118 CSCKANVEGQKCERC 1132
Score = 42 (19.8 bits), Expect = 9.6e-33, Sum P(2) = 9.6e-33
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 262 VCRCEHNTAGPDCNECAPFY 281
VC+C G C CA Y
Sbjct: 708 VCQCPPGYDGTSCEMCALGY 727
Score = 40 (19.1 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAP 285
C C+ AG C+ C Y P
Sbjct: 427 CICKPGYAGERCDRCVFGYAGFP 449
>UNIPROTKB|P24043 [details] [associations]
symbol:LAMA2 "Laminin subunit alpha-2" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0030155 GO:GO:0005198
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
Pfam:PF02210 GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
HOGENOM:HOG000293201 HOVERGEN:HBG052298 KO:K05637 GO:GO:0005606
EMBL:Z26653 EMBL:U66796 EMBL:U66733 EMBL:U66734 EMBL:U66735
EMBL:U66736 EMBL:U66737 EMBL:U66738 EMBL:U66739 EMBL:U66740
EMBL:U66741 EMBL:U66742 EMBL:U66743 EMBL:U66745 EMBL:U66746
EMBL:U66747 EMBL:U66748 EMBL:U66749 EMBL:U66750 EMBL:U66751
EMBL:U66752 EMBL:U66753 EMBL:U66754 EMBL:U66755 EMBL:U66756
EMBL:U66757 EMBL:U66758 EMBL:U66759 EMBL:U66760 EMBL:U66761
EMBL:U66762 EMBL:U66763 EMBL:U66764 EMBL:U66765 EMBL:U66766
EMBL:U66768 EMBL:U66769 EMBL:U66770 EMBL:U66771 EMBL:U66772
EMBL:U66773 EMBL:U66774 EMBL:U66775 EMBL:U66776 EMBL:U66777
EMBL:U66778 EMBL:U66779 EMBL:U66780 EMBL:U66781 EMBL:U66782
EMBL:U66783 EMBL:U66784 EMBL:U66785 EMBL:U66786 EMBL:U66787
EMBL:U66788 EMBL:U66789 EMBL:U66790 EMBL:U66791 EMBL:U66792
EMBL:U66793 EMBL:U66794 EMBL:U66795 EMBL:AL583853 EMBL:AL356124
EMBL:AL445439 EMBL:AL513527 EMBL:AL590613 EMBL:AL669984
EMBL:AL589927 EMBL:M59832 IPI:IPI00873889 PIR:PX0082
RefSeq:NP_000417.2 RefSeq:NP_001073291.1 UniGene:Hs.200841
ProteinModelPortal:P24043 SMR:P24043 DIP:DIP-42562N IntAct:P24043
MINT:MINT-2635209 STRING:P24043 PhosphoSite:P24043 DMDM:215274259
PaxDb:P24043 PRIDE:P24043 DNASU:3908 Ensembl:ENST00000421865
GeneID:3908 KEGG:hsa:3908 UCSC:uc003qbn.3 CTD:3908
GeneCards:GC06P129246 HGNC:HGNC:6482 HPA:CAB040310 MIM:156225
MIM:607855 neXtProt:NX_P24043 Orphanet:258 PharmGKB:PA30271
eggNOG:COG0419 OMA:NCNSFGS OrthoDB:EOG4RFKRM PhylomeDB:P24043
GenomeRNAi:3908 NextBio:15339 ArrayExpress:P24043 Bgee:P24043
CleanEx:HS_LAMA2 Genevestigator:P24043 GermOnline:ENSG00000196569
Uniprot:P24043
Length = 3122
Score = 365 (133.5 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 96/303 (31%), Positives = 149/303 (49%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCYEDT------HP 58
P N A +A + + TCG + G P+ V+ G V C C +++ HP
Sbjct: 41 PAVLNLASNALITTNATCG-EKG-PEMYCKLVEHVPGQPVRNPQCRICNQNSSNPNQRHP 98
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFAIY 117
+ D NT WWQS ++ +G+++ + V ITL + F + YV + SPRP ++ I
Sbjct: 99 ITNAIDGKNT--WWQSPSIKNGIEY-HYVTITLDLQQVFQIAYVIVKAANSPRPGNW-IL 154
Query: 118 KKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+++ ++ + P+Q+++ + C Y + + D V CTS YS + PL G +
Sbjct: 155 ERSLDDVEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIHPLENGEI 214
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL---------DPSVLR 225
+ + GR A S L EF +A IR+ R+ T +L + DP V R
Sbjct: 215 HISLINGRPSADDPSPEL--LEFTSARYIRLRFQRIRTLNADLMMFAHKDPREIDPIVTR 272
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYNDA 284
Y+Y++ DISVG C C GHA CP D +T + C CEHNT G C++C P ++
Sbjct: 273 RYYYSVKDISVGGMCICYGHARACPL----DPATNKSRCECEHNTCGDSCDQCCPGFHQK 328
Query: 285 PWR 287
PWR
Sbjct: 329 PWR 331
Score = 50 (22.7 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 11/36 (30%), Positives = 12/36 (33%)
Query: 261 RVCRCEHNTAGPDCNECAPFYNDAPWRRASDDANEC 296
R C G C CAP Y +P EC
Sbjct: 1493 RCTACPRGYEGQYCERCAPGYTGSPGNPGGS-CQEC 1527
Score = 48 (22.0 bits), Expect = 3.7e-33, Sum P(2) = 3.7e-33
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAP 285
C C+ G C+ CA Y P
Sbjct: 442 CHCKTGFGGVSCDRCARGYTGYP 464
Score = 41 (19.5 bits), Expect = 2.0e-32, Sum P(2) = 2.0e-32
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 263 CRCEHNTAGPDCNECAP-FY 281
C C +G C C P FY
Sbjct: 1380 CDCPLGYSGLSCEACLPGFY 1399
>UNIPROTKB|E1BWU4 [details] [associations]
symbol:E1BWU4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:YCECFGH EMBL:AADN02033768 EMBL:AADN02033769 EMBL:AADN02033770
EMBL:AADN02033771 EMBL:AADN02033772 IPI:IPI00587584
ProteinModelPortal:E1BWU4 Ensembl:ENSGALT00000002932 Uniprot:E1BWU4
Length = 541
Score = 362 (132.5 bits), Expect = 4.8e-33, P = 4.8e-33
Identities = 96/283 (33%), Positives = 140/283 (49%)
Query: 29 GVPQPTRFCVQSGTHVTANTCDYCYED-THPVRYLTDLS--NTTTWWQSTTMYDGVQWPN 85
G P P FC ++ N CD ++ HP + DL + +T+WQSTT D + P
Sbjct: 73 GDP-PETFCAMGNPYMCNNECDASTQELAHPPELMFDLEGRHPSTFWQSTTWKDYPK-PL 130
Query: 86 QVNITLKFGKTFDVT-YVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPD 144
VNITL + KT ++T + + F S RP+ + K +W P+Q+Y+ C + + + D
Sbjct: 131 HVNITLSWNKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHM-D 189
Query: 145 DNSGKANDSDT--RVFCTSEYSDLSPLTGGAVPFATLEGRYR--AKTFSYNL-------- 192
S K T + CT EYS +T + ++ R+ A +N+
Sbjct: 190 PKSVKDLSQHTVLEIICTEEYST-GYMTNSKIIHFEIKDRFAFFAGPRLHNMASLYGQLD 248
Query: 193 ---NLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISV-GA-RCKCNGHAS 247
L++F T T++RI L R T E+++D L YFYAI+DI V G RCKCN HA+
Sbjct: 249 TTKKLRDFFTITDLRIRLLRPAT--GEIYVDEQHLARYFYAISDIRVYGRNRCKCNLHAT 306
Query: 248 ECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
C + + R +C CEHNT GPDC +C Y PW S
Sbjct: 307 GC-----KEENKRLLCECEHNTTGPDCGKCKKNYQGRPWSPGS 344
>UNIPROTKB|F1S575 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 OMA:YCECFGH
EMBL:CU179665 EMBL:CU407227 Ensembl:ENSSSCT00000007505
Uniprot:F1S575
Length = 469
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 93/273 (34%), Positives = 130/273 (47%)
Query: 37 CVQSGTHVTANTCDYCYED-THPVRYLTDLS--NTTTWWQSTTMYDGVQWPNQVNITLKF 93
C ++ N CD + HP + D + +T+WQS T + + P QVNITL +
Sbjct: 3 CAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPK-PLQVNITLSW 61
Query: 94 GKTFDVT-YVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKAND 152
KT ++T + + F S RP+ + K +W P+Q+Y+ C + + + D S K
Sbjct: 62 SKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHM-DPKSVKDLS 120
Query: 153 SDT--RVFCTSEYSDLSPLTGGAV-------PFATLEG---RYRAKTFSY---NLNLQEF 197
T + CT EYS +T + FA G R A + L++F
Sbjct: 121 QHTVLEIICTEEYST-GYMTNSKIIHFEIKDRFAFFAGPWLRNMASLYGQLDTTKKLRDF 179
Query: 198 VTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDG 257
T T++RI L L E+F+D L YFYAI+DI V RCKCN HA+ C Y D
Sbjct: 180 FTVTDLRIRL--LRPAVGEIFVDELHLARYFYAISDIKVHGRCKCNLHATVCVY----DN 233
Query: 258 STRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
S + C CEHNT GPDC +C Y PW S
Sbjct: 234 S-KLTCECEHNTTGPDCGKCKKNYQGRPWSPGS 265
>UNIPROTKB|G3N1H6 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:DAAA02032274 EMBL:DAAA02032272 EMBL:DAAA02032273
Ensembl:ENSBTAT00000064483 Uniprot:G3N1H6
Length = 595
Score = 341 (125.1 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 97/286 (33%), Positives = 133/286 (46%)
Query: 25 GYQNGVPQPTRFCVQSGTHVTANTCDYCYED-THPVRYLTDLSNT--TTWWQSTTMYDGV 81
G G P P RFC ++ +N CD D HP R + D + T+WQS T +
Sbjct: 58 GITCGDP-PERFCSHENPYLCSNECDASNPDLAHPPRLMFDREDEGLATYWQSVT-WSRY 115
Query: 82 QWPNQVNITLKFGKTFDVTY-VRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETY 140
P + NITL + K+ ++T V + F RP + K +W P+QFY+ C E +
Sbjct: 116 PSPLEANITLSWNKSVELTDDVVVTFEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAF 175
Query: 141 GLPDDNSGKANDSDT-RVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSY-------NL 192
G+P + + S RV CT EYS + E R R F+ NL
Sbjct: 176 GMPARRARDLSASGAHRVLCTEEYSRWAG--SKKEKHVRFEVRDRFAIFAGPDLRNMDNL 233
Query: 193 --------NLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNG 244
L+EF T T++R+ L L ++ L YFYAI++I V RCKCN
Sbjct: 234 YTRLESAKGLKEFFTLTDLRMRL--LRPALGGTYVQRENLYKYFYAISNIEVTGRCKCNL 291
Query: 245 HASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
HA+ C VR+ GS + C CEHNT GPDC +C + WR S
Sbjct: 292 HANLCS-VRE--GSLQ--CECEHNTTGPDCGKCKRSFRTRSWRAGS 332
Score = 40 (19.1 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 278 APFYNDAPWRRASDDA 293
AP + APW + S A
Sbjct: 361 APLWASAPWPQVSSSA 376
>UNIPROTKB|F1MMT2 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0030155 GO:GO:0007155 GO:GO:0042383
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:DAAA02026607 EMBL:DAAA02026593 EMBL:DAAA02026594
EMBL:DAAA02026595 EMBL:DAAA02026596 EMBL:DAAA02026597
EMBL:DAAA02026598 EMBL:DAAA02026599 EMBL:DAAA02026600
EMBL:DAAA02026601 EMBL:DAAA02026602 EMBL:DAAA02026603
EMBL:DAAA02026604 EMBL:DAAA02026605 EMBL:DAAA02026606
IPI:IPI00924129 Ensembl:ENSBTAT00000061257 Uniprot:F1MMT2
Length = 3085
Score = 369 (135.0 bits), Expect = 4.5e-32, P = 4.5e-32
Identities = 99/312 (31%), Positives = 152/312 (48%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCYEDT------HP 58
P N A SA + + TCG + G P+ V+ G V C C +++ HP
Sbjct: 4 PAVLNLASSALITTNATCG-EKG-PEMYCKLVEHVPGQPVRNPQCRICNQNSSNPYQRHP 61
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFAIY 117
+ D NT WWQS ++ +G+++ + V ITL + F + YV + SPRP ++ I
Sbjct: 62 ITNAIDGKNT--WWQSPSIKNGIEY-HYVTITLDLQQVFQIAYVIVKAANSPRPGNW-IL 117
Query: 118 KKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+++ +N + P+Q+++ + C Y + + D V CTS YS + PL G +
Sbjct: 118 ERSLDNVVYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIHPLENGEI 177
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL---------DPSVLR 225
+ + GR A S L EF +A IR+ R+ T +L + DP V R
Sbjct: 178 HISLINGRPSADDPSPEL--LEFTSARYIRLRFQRIRTLNADLMMFAHKDPREIDPIVTR 235
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAP 285
Y+Y++ DISVG C C GHA CP ++ S C CEHNT G C++C P ++ P
Sbjct: 236 RYYYSVKDISVGGMCICYGHARACPLDPVTNKSR---CECEHNTCGDSCDQCCPGFHQKP 292
Query: 286 WRRASD-DANEC 296
WR + +EC
Sbjct: 293 WRAGTFLTKSEC 304
>MGI|MGI:99912 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007411 "axon guidance" evidence=IGI]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0032224 "positive
regulation of synaptic transmission, cholinergic" evidence=IMP]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99912 GO:GO:0007411 GO:GO:0030155
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 HOGENOM:HOG000293201
HOVERGEN:HBG052298 GO:GO:0005606 eggNOG:COG0419 EMBL:U12147
EMBL:X69869 EMBL:S75315 IPI:IPI00309999 PIR:I49077
UniGene:Mm.256087 PDB:1DYK PDB:1OKQ PDB:1QU0 PDB:2WJS PDBsum:1DYK
PDBsum:1OKQ PDBsum:1QU0 PDBsum:2WJS ProteinModelPortal:Q60675
SMR:Q60675 STRING:Q60675 PhosphoSite:Q60675 PaxDb:Q60675
PRIDE:Q60675 UCSC:uc007esf.1 ChiTaRS:LAMA2 EvolutionaryTrace:Q60675
CleanEx:MM_LAMA2 Genevestigator:Q60675
GermOnline:ENSMUSG00000019899 Uniprot:Q60675
Length = 3106
Score = 365 (133.5 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 99/313 (31%), Positives = 152/313 (48%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS--GTHVTANTCDYCYEDT------HP 58
P N A +A + + TCG + G P+ V+ G V C C +++ HP
Sbjct: 37 PAVLNLASNALITTNATCG-EKG-PEMYCKLVEHVPGQPVRNPQCRICNQNSSNPYQRHP 94
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESFAIY 117
+ D NT WWQS ++ +GV++ + V ITL + F + YV + SPRP ++ I
Sbjct: 95 ITNAIDGKNT--WWQSPSIKNGVEY-HYVTITLDLQQVFQIAYVIVKAANSPRPGNW-IL 150
Query: 118 KKTYENSSWTPFQFYSAS---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAV 174
+++ ++ + P+Q+++ + C Y + + D V CTS YS + PL G +
Sbjct: 151 ERSLDDVEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIHPLENGEI 210
Query: 175 PFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL---------DPSVLR 225
+ + GR A S L EF +A IR+ R+ T +L + DP V R
Sbjct: 211 HISLINGRPSADDPSPEL--LEFTSARYIRLRFQRIRTLNADLMMFAHKDPREIDPIVTR 268
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV-CRCEHNTAGPDCNECAPFYNDA 284
Y+Y++ DISVG C C GHA CP D +T + C CEHNT G C+ C P ++
Sbjct: 269 RYYYSVKDISVGGMCICYGHARACPL----DPATNKSRCECEHNTCGESCDRCCPGFHQK 324
Query: 285 PWRRASD-DANEC 296
PWR + +EC
Sbjct: 325 PWRAGTFLTKSEC 337
>RGD|1563465 [details] [associations]
symbol:Ntng1 "netrin G1" species:10116 "Rattus norvegicus"
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0046658 "anchored to plasma
membrane" evidence=IEA;ISO] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 RGD:1563465 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 IPI:IPI00369129
Ensembl:ENSRNOT00000045113 UCSC:RGD:1563465 ArrayExpress:F1M3C7
Uniprot:F1M3C7
Length = 398
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 92/262 (35%), Positives = 124/262 (47%)
Query: 47 NTCDYCYED-THPVRYLTDLS--NTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVT-YV 102
N CD + HP + D + +T+WQS T + + P QVNITL + KT ++T +
Sbjct: 8 NECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPK-PLQVNITLSWSKTIELTDNI 66
Query: 103 RLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDT--RVFCT 160
+ F S RP+ + K +W P+Q+Y+ C + + D S K T + CT
Sbjct: 67 VITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHM-DPKSVKDLSQHTVLEIICT 125
Query: 161 SEYSDLSPLTGGAVPF------ATLEG-RYRAKTFSYNL-----NLQEFVTATEIRITLD 208
EYS + F A G R R Y L++F T T++RI L
Sbjct: 126 EEYSTGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRL- 184
Query: 209 RLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHN 268
L E+F+D L YFYAI+DI V RCKCN HA+ C Y D S + C CEHN
Sbjct: 185 -LRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATMCVY----DNS-KLTCECEHN 238
Query: 269 TAGPDCNECAPFYNDAPWRRAS 290
T GPDC +C Y PW S
Sbjct: 239 TTGPDCGKCKKNYQGRPWSPGS 260
>UNIPROTKB|F1LWK9 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
IPI:IPI00948119 Ensembl:ENSRNOT00000066218 ArrayExpress:F1LWK9
Uniprot:F1LWK9
Length = 457
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 92/262 (35%), Positives = 124/262 (47%)
Query: 47 NTCDYCYED-THPVRYLTDLS--NTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVT-YV 102
N CD + HP + D + +T+WQS T + + P QVNITL + KT ++T +
Sbjct: 8 NECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPK-PLQVNITLSWSKTIELTDNI 66
Query: 103 RLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDT--RVFCT 160
+ F S RP+ + K +W P+Q+Y+ C + + D S K T + CT
Sbjct: 67 VITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHM-DPKSVKDLSQHTVLEIICT 125
Query: 161 SEYSDLSPLTGGAVPF------ATLEG-RYRAKTFSYNL-----NLQEFVTATEIRITLD 208
EYS + F A G R R Y L++F T T++RI L
Sbjct: 126 EEYSTGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRL- 184
Query: 209 RLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHN 268
L E+F+D L YFYAI+DI V RCKCN HA+ C Y D S + C CEHN
Sbjct: 185 -LRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATMCVY----DNS-KLTCECEHN 238
Query: 269 TAGPDCNECAPFYNDAPWRRAS 290
T GPDC +C Y PW S
Sbjct: 239 TTGPDCGKCKKNYQGRPWSPGS 260
>UNIPROTKB|F1LX88 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 IPI:IPI00559428 ProteinModelPortal:F1LX88
Ensembl:ENSRNOT00000043455 ArrayExpress:F1LX88 Uniprot:F1LX88
Length = 401
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 92/262 (35%), Positives = 124/262 (47%)
Query: 47 NTCDYCYED-THPVRYLTDLS--NTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVT-YV 102
N CD + HP + D + +T+WQS T + + P QVNITL + KT ++T +
Sbjct: 8 NECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPK-PLQVNITLSWSKTIELTDNI 66
Query: 103 RLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDT--RVFCT 160
+ F S RP+ + K +W P+Q+Y+ C + + D S K T + CT
Sbjct: 67 VITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHM-DPKSVKDLSQHTVLEIICT 125
Query: 161 SEYSDLSPLTGGAVPF------ATLEG-RYRAKTFSYNL-----NLQEFVTATEIRITLD 208
EYS + F A G R R Y L++F T T++RI L
Sbjct: 126 EEYSTGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRL- 184
Query: 209 RLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHN 268
L E+F+D L YFYAI+DI V RCKCN HA+ C Y D S + C CEHN
Sbjct: 185 -LRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATMCVY----DNS-KLTCECEHN 238
Query: 269 TAGPDCNECAPFYNDAPWRRAS 290
T GPDC +C Y PW S
Sbjct: 239 TTGPDCGKCKKNYQGRPWSPGS 260
>UNIPROTKB|F1LYF9 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 IPI:IPI00565565 Ensembl:ENSRNOT00000050140
ArrayExpress:F1LYF9 Uniprot:F1LYF9
Length = 412
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 92/262 (35%), Positives = 124/262 (47%)
Query: 47 NTCDYCYED-THPVRYLTDLS--NTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVT-YV 102
N CD + HP + D + +T+WQS T + + P QVNITL + KT ++T +
Sbjct: 8 NECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPK-PLQVNITLSWSKTIELTDNI 66
Query: 103 RLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDT--RVFCT 160
+ F S RP+ + K +W P+Q+Y+ C + + D S K T + CT
Sbjct: 67 VITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHM-DPKSVKDLSQHTVLEIICT 125
Query: 161 SEYSDLSPLTGGAVPF------ATLEG-RYRAKTFSYNL-----NLQEFVTATEIRITLD 208
EYS + F A G R R Y L++F T T++RI L
Sbjct: 126 EEYSTGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRL- 184
Query: 209 RLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHN 268
L E+F+D L YFYAI+DI V RCKCN HA+ C Y D S + C CEHN
Sbjct: 185 -LRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATMCVY----DNS-KLTCECEHN 238
Query: 269 TAGPDCNECAPFYNDAPWRRAS 290
T GPDC +C Y PW S
Sbjct: 239 TTGPDCGKCKKNYQGRPWSPGS 260
>UNIPROTKB|F1LYH8 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
IPI:IPI00560761 Ensembl:ENSRNOT00000042019 ArrayExpress:F1LYH8
Uniprot:F1LYH8
Length = 378
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 92/262 (35%), Positives = 124/262 (47%)
Query: 47 NTCDYCYED-THPVRYLTDLS--NTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVT-YV 102
N CD + HP + D + +T+WQS T + + P QVNITL + KT ++T +
Sbjct: 8 NECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPK-PLQVNITLSWSKTIELTDNI 66
Query: 103 RLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDT--RVFCT 160
+ F S RP+ + K +W P+Q+Y+ C + + D S K T + CT
Sbjct: 67 VITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHM-DPKSVKDLSQHTVLEIICT 125
Query: 161 SEYSDLSPLTGGAVPF------ATLEG-RYRAKTFSYNL-----NLQEFVTATEIRITLD 208
EYS + F A G R R Y L++F T T++RI L
Sbjct: 126 EEYSTGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRL- 184
Query: 209 RLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHN 268
L E+F+D L YFYAI+DI V RCKCN HA+ C Y D S + C CEHN
Sbjct: 185 -LRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATMCVY----DNS-KLTCECEHN 238
Query: 269 TAGPDCNECAPFYNDAPWRRAS 290
T GPDC +C Y PW S
Sbjct: 239 TTGPDCGKCKKNYQGRPWSPGS 260
>UNIPROTKB|F1LZW7 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] RGD:1563465
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 IPI:IPI00564318
Ensembl:ENSRNOT00000051174 ArrayExpress:F1LZW7 Uniprot:F1LZW7
Length = 282
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 92/262 (35%), Positives = 124/262 (47%)
Query: 47 NTCDYCYED-THPVRYLTDLS--NTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVT-YV 102
N CD + HP + D + +T+WQS T + + P QVNITL + KT ++T +
Sbjct: 8 NECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPK-PLQVNITLSWSKTIELTDNI 66
Query: 103 RLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDT--RVFCT 160
+ F S RP+ + K +W P+Q+Y+ C + + D S K T + CT
Sbjct: 67 VITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHM-DPKSVKDLSQHTVLEIICT 125
Query: 161 SEYSDLSPLTGGAVPF------ATLEG-RYRAKTFSYNL-----NLQEFVTATEIRITLD 208
EYS + F A G R R Y L++F T T++RI L
Sbjct: 126 EEYSTGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRL- 184
Query: 209 RLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHN 268
L E+F+D L YFYAI+DI V RCKCN HA+ C Y D S + C CEHN
Sbjct: 185 -LRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATMCVY----DNS-KLTCECEHN 238
Query: 269 TAGPDCNECAPFYNDAPWRRAS 290
T GPDC +C Y PW S
Sbjct: 239 TTGPDCGKCKKNYQGRPWSPGS 260
>WB|WBGene00001328 [details] [associations]
symbol:epi-1 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007414 "axonal
defasciculation" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0009408 "response to heat" evidence=IMP]
[GO:0010950 "positive regulation of endopeptidase activity"
evidence=IMP] [GO:0051788 "response to misfolded protein"
evidence=IMP] InterPro:IPR010307 Pfam:PF06009 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0001764 GO:GO:0002119 GO:GO:0010171 GO:GO:0040017
GO:GO:0007155 GO:GO:0009408 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042127 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0040035 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0010950
GO:GO:0005604 GO:GO:0071711 GO:GO:0040027 Pfam:PF02210
GO:GO:0051788 EMBL:Z70286 UniGene:Cel.18380 GeneID:177956
KEGG:cel:CELE_K08C7.3 CTD:177956 GeneTree:ENSGT00700000104140
NextBio:899114 GO:GO:0007414 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 EMBL:AB001074
EMBL:AB016806 PIR:T37316 RefSeq:NP_001023281.1 HSSP:Q92956
ProteinModelPortal:G5EEV6 SMR:G5EEV6 PRIDE:G5EEV6
EnsemblMetazoa:K08C7.3a.1 EnsemblMetazoa:K08C7.3a.2
WormBase:K08C7.3a OMA:CHHALLD Uniprot:G5EEV6
Length = 3704
Score = 359 (131.4 bits), Expect = 6.5e-31, P = 6.5e-31
Identities = 89/285 (31%), Positives = 141/285 (49%)
Query: 22 NTCGYQNGVPQPTRFCVQSGTHVTANTCDYCY---EDTHPVRYLTDLSNTTTWWQSTTMY 78
N+ YQ+ Q + ++ + C +C E++HP + D +N+ WW S +
Sbjct: 74 NSYSYQDDEQQKSWSQYENPMVRGGHGCGHCNAGNENSHPAANMVDGNNS--WWMSPPLS 131
Query: 79 DGVQWPNQVNITLKFGKTFDVTYVRL-LFWSPRPESFAIYKKTYENSSWTP-FQFY--SA 134
G+Q N+VNIT+ + F V YV + + SPRP S+ + + T ++ P F F +A
Sbjct: 132 RGLQH-NEVNITIDLEQEFHVAYVWIQMANSPRPGSWVLERSTDHGKTYQPWFNFAENAA 190
Query: 135 SCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSYNLNL 194
C +G+ ++ ++ D+ V C ++ + L PL + LE R ++ F+ + L
Sbjct: 191 ECMRRFGM--ESLSPISEDDS-VTCRTDMASLQPLENAEMVIRILEHRPSSRQFATSEAL 247
Query: 195 QEFVTATEIRITLDRLNTFYDEL-----FLDPSVLRSYFYAIADISVGARCKCNGHASEC 249
Q F AT +R+ L T L + DP+V R YFYAI +I +G RC CNGHA C
Sbjct: 248 QNFTRATNVRLRLLGTRTLQGHLMDMNEWRDPTVTRRYFYAIKEIMIGGRCVCNGHAVTC 307
Query: 250 PYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDAN 294
+ + +CRCEHNT G C C P + W+ A+ N
Sbjct: 308 D-ILEPQRPKSLLCRCEHNTCGDMCERCCPGFVQKQWQAATAHNN 351
>WB|WBGene00002247 [details] [associations]
symbol:lam-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0060465 "pharynx development" evidence=IMP]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] GO:GO:0009792 GO:GO:0002119
InterPro:IPR016140 SMART:SM00499 GO:GO:0010171 GO:GO:0040011
GO:GO:0040017 GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 GO:GO:0060465
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 EMBL:FO080652 RefSeq:NP_500734.3
PaxDb:O44565 EnsemblMetazoa:W03F8.5 GeneID:177292
KEGG:cel:CELE_W03F8.5 UCSC:W03F8.5 CTD:177292 WormBase:W03F8.5
NextBio:896146 Uniprot:O44565
Length = 1790
Score = 355 (130.0 bits), Expect = 7.0e-31, P = 7.0e-31
Identities = 97/321 (30%), Positives = 145/321 (45%)
Query: 2 DNRCIPPFENAAFS--ASVESTNTCGYQNGVPQPTRFCVQSGTHVTANT-CDYCYEDTH- 57
D C P N + +++T+TCG Q RFC+ S H+ T C YC T
Sbjct: 34 DRSCYPITGNLLIGRKSQLKATSTCGSQGR----QRFCIVS--HLEEQTKCFYCDSRTEW 87
Query: 58 -----PVRYLTDLSNTTTWW---QSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSP 109
P R + N T ++ Y V+I+ F T++ + F S
Sbjct: 88 KPQREPYRLSHRIENVVTEVMDDKNRNWYQSENGAQNVSISFDLEAEFHFTHLIMTFKSF 147
Query: 110 RPESFAIYKKTYENSSWTPFQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSP 168
RP + I + +W +++++ C ++ G+P+ K D V CTS+YSD++P
Sbjct: 148 RPAAMIIERSADFGKTWQVYRYFAYDCDSSFPGIPEGPPKKHTD----VICTSQYSDVAP 203
Query: 169 LTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLD--PSVLRS 226
TGG + + + + Y + + T +R +L+T D+L LD P +
Sbjct: 204 STGGEIVYKVISPHIVTEN-PYADEISTLLKITNLRFNFTKLHTLGDDL-LDYRPEIDEK 261
Query: 227 YFYAIADISVGARCKCNGHASEC----PYVRQSDGSTRRV-----CRCEHNTAGPDCNEC 277
Y+YAI +I V C C GHAS C P+V + R C C HNT G +C +C
Sbjct: 262 YYYAIYEIVVRGSCSCYGHASRCIPIDPHVSPNTVMERADIVHGRCECMHNTEGLNCEKC 321
Query: 278 APFYNDAPWRRA-SDDANECR 297
FYND PWR A D+ NECR
Sbjct: 322 KAFYNDLPWRPAIGDEKNECR 342
>UNIPROTKB|F1P486 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02014130
EMBL:AADN02014129 IPI:IPI00581824 Ensembl:ENSGALT00000010226
OMA:NCTATFG ArrayExpress:F1P486 Uniprot:F1P486
Length = 613
Score = 344 (126.2 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 97/316 (30%), Positives = 142/316 (44%)
Query: 5 CIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDY--CY-------ED 55
C PP N A + + TCG QN + QS H ++ C C ++
Sbjct: 7 CNPPVGNLATGRTPITLTTCG-QNSTELYCSYPDQSLLHPASHGCGQPRCTKCNANQPDN 65
Query: 56 THPVRYLTD--LSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPES 113
+H +TD +N +WWQS GV ++ I L F F +T+V +F SPRP +
Sbjct: 66 SHLPADMTDDFFANPVSWWQSA---QGV---HREEIRLDFETEFYLTHVIAVFKSPRPAA 119
Query: 114 FAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGA 173
+ + +W P++++S +C T+GL DD + + + CTS YSD P T G
Sbjct: 120 MVLERSQDYGQTWRPYKYFSVNCTATFGLQDDLTEEGS------MCTSRYSDAVPCTRGE 173
Query: 174 VPFATLEGRYRAKTFSYNLNLQEFVTATEIRITL-DRLNTFYDELFLDPSVLRSYFYAIA 232
V + L + + Y+ Q+ + T +R+ L R L L R YAI
Sbjct: 174 VIYRALTPSNKIED-PYSPEAQDLLKLTNLRLLLLKRQECPCRGLGLVEKPQRFAHYAIY 232
Query: 233 DISVGARCKCNGHASECPYVRQS-----DGSTRRV---CRCEHNTAGPDCNECAPFYNDA 284
D+ + C CNGHA EC ++ +V C C HNTAG C +CAP YND
Sbjct: 233 DLIIRGSCFCNGHAEECELANRTVPAKAQSRLHKVHGKCVCRHNTAGDHCEKCAPLYNDQ 292
Query: 285 PWRRASDDA---NECR 297
PW+ NEC+
Sbjct: 293 PWKPGDGKTGAPNECK 308
>UNIPROTKB|Q9HB63 [details] [associations]
symbol:NTN4 "Netrin-4" species:9606 "Homo sapiens"
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005886
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0016322 EMBL:CH471054
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AF278532 EMBL:AF297711 EMBL:AF119916 EMBL:AY330211
EMBL:AL137540 EMBL:BC013591 EMBL:BC136798 EMBL:BC136799
EMBL:AL833767 EMBL:AK024691 IPI:IPI00328091 IPI:IPI00385236
IPI:IPI00472613 PIR:T46383 RefSeq:NP_067052.2 UniGene:Hs.201034
ProteinModelPortal:Q9HB63 SMR:Q9HB63 DIP:DIP-46274N IntAct:Q9HB63
MINT:MINT-1463888 STRING:Q9HB63 PhosphoSite:Q9HB63 DMDM:76789662
PaxDb:Q9HB63 PRIDE:Q9HB63 Ensembl:ENST00000343702
Ensembl:ENST00000344911 Ensembl:ENST00000538383
Ensembl:ENST00000553059 GeneID:59277 KEGG:hsa:59277 UCSC:uc001tei.3
UCSC:uc009ztf.3 CTD:59277 GeneCards:GC12M095984 HGNC:HGNC:13658
HPA:HPA049832 MIM:610401 neXtProt:NX_Q9HB63 PharmGKB:PA31815
eggNOG:NOG329215 HOVERGEN:HBG082019 InParanoid:Q9HB63 KO:K06845
OMA:RSQDFGK PhylomeDB:Q9HB63 ChiTaRS:NTN4 GenomeRNAi:59277
NextBio:65162 ArrayExpress:Q9HB63 Bgee:Q9HB63 CleanEx:HS_NTN4
Genevestigator:Q9HB63 GermOnline:ENSG00000074527 GO:GO:0060668
Uniprot:Q9HB63
Length = 628
Score = 342 (125.4 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 101/317 (31%), Positives = 139/317 (43%)
Query: 2 DNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS-GTHVTANT--CDYC---YED 55
+ C P N A + + TCG QN +C S T +T CD C Y
Sbjct: 31 EKACNPRMGNLALGRKLWADTTCG-QNATEL---YCFYSENTDLTCRQPKCDKCNAAYPH 86
Query: 56 -THPVRYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPE 112
H + D S TWWQS + V ++ I L F T++ ++F SPRP
Sbjct: 87 LAHLPSAMADSSFRFPRTWWQSA---EDV---HREKIQLDLEAEFYFTHLIVMFKSPRPA 140
Query: 113 SFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
+ + + +W P+++++ +C T+GL DD K CTS+YS P TGG
Sbjct: 141 AMVLDRSQDFGKTWKPYKYFATNCSATFGLEDDVVKKG------AICTSKYSSPFPCTGG 194
Query: 173 AVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITL-DRLNTFYDELFLDPSVLRSYFYAI 231
V F L Y + Y+ +QE + T +R+ L R + L+ YAI
Sbjct: 195 EVIFKALSPPYDTEN-PYSAKVQEQLKITNLRVQLLKRQSCPCQRNDLNEEPQHFTHYAI 253
Query: 232 ADISVGARCKCNGHASECPYVR-----QSDGSTRRV---CRCEHNTAGPDCNECAPFYND 283
D V C CNGHA +C V ++ G+ V C C+HNTAG C CAP YND
Sbjct: 254 YDFIVKGSCFCNGHADQCIPVHGFRPVKAPGTFHMVHGKCMCKHNTAGSHCQHCAPLYND 313
Query: 284 APWRRASDDA---NECR 297
PW A NECR
Sbjct: 314 RPWEAADGKTGAPNECR 330
>MGI|MGI:1888978 [details] [associations]
symbol:Ntn4 "netrin 4" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0016322 "neuron
remodeling" evidence=IDA] [GO:0043237 "laminin-1 binding"
evidence=IDA] [GO:0060668 "regulation of branching involved in
salivary gland morphogenesis by extracellular matrix-epithelial
cell signaling" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
MGI:MGI:1888978 GO:GO:0016322 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 GO:GO:0043237 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:59277 eggNOG:NOG329215
HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK GO:GO:0060668
EMBL:AF268066 EMBL:AF281278 EMBL:AC124585 EMBL:AC151976
IPI:IPI00119840 RefSeq:NP_067295.2 UniGene:Mm.483868
ProteinModelPortal:Q9JI33 SMR:Q9JI33 STRING:Q9JI33
PhosphoSite:Q9JI33 PRIDE:Q9JI33 Ensembl:ENSMUST00000020204
GeneID:57764 KEGG:mmu:57764 HOGENOM:HOG000060085 InParanoid:Q9JI33
OrthoDB:EOG4M0F17 NextBio:313932 Bgee:Q9JI33 CleanEx:MM_NTN4
Genevestigator:Q9JI33 GermOnline:ENSMUSG00000020019 Uniprot:Q9JI33
Length = 628
Score = 340 (124.7 bits), Expect = 3.5e-30, P = 3.5e-30
Identities = 99/318 (31%), Positives = 141/318 (44%)
Query: 2 DNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS-GTHVTANT--CDYCYED--- 55
+ C P N A + + CG QN FC S +T CD C
Sbjct: 31 EKACNPRMGNLALGRKLRADTMCG-QNATEL---FCFYSENADLTCRQPKCDKCNAAHSH 86
Query: 56 -THPVRYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPE 112
HP + D S TWWQS + V ++ I L F T++ ++F SPRP
Sbjct: 87 LAHPPSAMADSSFRFPRTWWQSA---EDV---HREKIQLDLEAEFYFTHLIMVFKSPRPA 140
Query: 113 SFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
+ + + +W P+++++ +C T+GL DD K CTS YS+ P TGG
Sbjct: 141 AMVLDRSQDFGKTWKPYKYFATNCSATFGLEDDVVKKG------AICTSRYSNPFPCTGG 194
Query: 173 AVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYF--YA 230
V F L Y + Y+ +QE + T +R+ L + + ++ D + +F YA
Sbjct: 195 EVIFRALSPPYDIEN-PYSAKVQEQLKITNLRVRLLKRQSCPCQIN-DLNAKPHHFMHYA 252
Query: 231 IADISVGARCKCNGHASECPYVR-----QSDGSTRRV---CRCEHNTAGPDCNECAPFYN 282
+ D V C CNGHA +C V ++ G+ V C C+HNTAG C CAP YN
Sbjct: 253 VYDFIVKGSCFCNGHADQCLPVEGFRPIKAPGAFHVVHGRCMCKHNTAGSHCQHCAPLYN 312
Query: 283 DAPWRRASDDA---NECR 297
D PW A NECR
Sbjct: 313 DRPWEAADGRTGAPNECR 330
Score = 116 (45.9 bits), Expect = 0.00074, P = 0.00074
Identities = 27/64 (42%), Positives = 32/64 (50%)
Query: 240 CKCNGHASECPY-VRQSDGSTRR---VCR-CEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
CKCNGHA C + V + S R VC C+HNT G C C P FY D RR
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDL--RRPFSAP 389
Query: 294 NECR 297
+ C+
Sbjct: 390 DACK 393
>UNIPROTKB|F1SQR3 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060668 "regulation of branching involved in salivary
gland morphogenesis by extracellular matrix-epithelial cell
signaling" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 EMBL:CU442719 RefSeq:XP_003481795.1
Ensembl:ENSSSCT00000000980 GeneID:100516554 KEGG:ssc:100516554
Uniprot:F1SQR3
Length = 628
Score = 338 (124.0 bits), Expect = 5.7e-30, P = 5.7e-30
Identities = 98/318 (30%), Positives = 143/318 (44%)
Query: 2 DNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS-GTHVTANT--CDYCYE-DTH 57
+ C P N A + + TCG QN +C S T +T CD C H
Sbjct: 31 EKACNPQMGNLALGRKLWADTTCG-QNATEL---YCFYSENTDLTCQQPKCDKCNAAQPH 86
Query: 58 PVRYLTDLSNTT-----TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPE 112
+++++ TWWQS + V ++ I L F T++ ++F SPRP
Sbjct: 87 LAHLPAAMADSSFRFPRTWWQSA---EDV---HREKIQLDLEAEFYFTHLIMVFKSPRPA 140
Query: 113 SFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
+ + + +W P+++++ +C T+GL DD K CTS YS+ P TGG
Sbjct: 141 AMVLDRSQDFGKTWMPYKYFATNCSATFGLEDDVVKKG------AICTSRYSNPFPCTGG 194
Query: 173 AVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYF--YA 230
V F L Y + Y+ QE + T +R+ L + + + DP+ +F YA
Sbjct: 195 EVIFRALSPPYDVED-PYSAKAQEQLKITNLRVQLLKRQSCPCQRN-DPNAKPQHFTHYA 252
Query: 231 IADISVGARCKCNGHASECPYVR-----QSDGSTRRV---CRCEHNTAGPDCNECAPFYN 282
I D V C CNGHA +C V ++ G+ V C C+HNTAG C CAP YN
Sbjct: 253 IYDFIVKGSCFCNGHADQCVPVDGFKPVKAPGAFHVVHGKCMCKHNTAGTHCQHCAPLYN 312
Query: 283 DAPWRRA---SDDANECR 297
D PW A + ECR
Sbjct: 313 DRPWEAADGKTGSPKECR 330
Score = 116 (45.9 bits), Expect = 0.00074, P = 0.00074
Identities = 26/64 (40%), Positives = 34/64 (53%)
Query: 240 CKCNGHASECPY---VRQSDGS-TRRVCR-CEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
CKCNGHA C + V ++ G+ + VC C+HNT G C C P FY D RR
Sbjct: 332 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDL--RRPFSAP 389
Query: 294 NECR 297
+ C+
Sbjct: 390 DACK 393
>UNIPROTKB|Q96CW9 [details] [associations]
symbol:NTNG2 "Netrin-G2" species:9606 "Homo sapiens"
[GO:0046658 "anchored to plasma membrane" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR013111 Pfam:PF07974
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
PDB:3ZYI PDBsum:3ZYI eggNOG:NOG286598 HOVERGEN:HBG052676
EMBL:AB058760 EMBL:AY358165 EMBL:AL353631 EMBL:AL159997
EMBL:BC013770 IPI:IPI00432766 IPI:IPI00843936 RefSeq:NP_115925.2
UniGene:Hs.163642 PDB:3TBD PDB:3ZYG PDBsum:3TBD PDBsum:3ZYG
ProteinModelPortal:Q96CW9 SMR:Q96CW9 IntAct:Q96CW9 STRING:Q96CW9
PhosphoSite:Q96CW9 DMDM:34922606 PRIDE:Q96CW9
Ensembl:ENST00000372179 Ensembl:ENST00000393229 GeneID:84628
KEGG:hsa:84628 UCSC:uc004cbh.2 CTD:84628 GeneCards:GC09P135037
H-InvDB:HIX0008489 HGNC:HGNC:14288 neXtProt:NX_Q96CW9
PharmGKB:PA134962540 HOGENOM:HOG000231614 KO:K16359
OrthoDB:EOG47D9FR GenomeRNAi:84628 NextBio:74534
ArrayExpress:Q96CW9 Bgee:Q96CW9 CleanEx:HS_NTNG2
Genevestigator:Q96CW9 GermOnline:ENSG00000196358 Uniprot:Q96CW9
Length = 530
Score = 334 (122.6 bits), Expect = 6.9e-30, P = 6.9e-30
Identities = 95/286 (33%), Positives = 129/286 (45%)
Query: 25 GYQNGVPQPTRFCVQSGTHVTANTCDYCYED-THPVRYLTDLSNT--TTWWQSTTMYDGV 81
G G P P RFC ++ +N CD D HP R + D T+WQS T +
Sbjct: 58 GITCGDP-PERFCSHENPYLCSNECDASNPDLAHPPRLMFDKEEEGLATYWQSIT-WSRY 115
Query: 82 QWPNQVNITLKFGKTFDVTY-VRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETY 140
P + NITL + KT ++T V + F RP + K +W P+QFY+ C E +
Sbjct: 116 PSPLEANITLSWNKTVELTDDVVMTFEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAF 175
Query: 141 GLPDDNSGKANDSDT-RVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSY-------NL 192
G+ + + S RV CT EYS + E R R F+ NL
Sbjct: 176 GMSARRARDMSSSSAHRVLCTEEYSRWAG--SKKEKHVRFEVRDRFAIFAGPDLRNMDNL 233
Query: 193 --------NLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNG 244
L+EF T T++R+ L L ++ L YFYAI++I V RCKCN
Sbjct: 234 YTRLESAKGLKEFFTLTDLRMRL--LRPALGGTYVQRENLYKYFYAISNIEVIGRCKCNL 291
Query: 245 HASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
HA+ C +GS + C CEHNT GPDC +C + WR S
Sbjct: 292 HANLCS---MREGSLQ--CECEHNTTGPDCGKCKKNFRTRSWRAGS 332
>UNIPROTKB|F1NI05 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00822825
Ensembl:ENSGALT00000039414 ArrayExpress:F1NI05 Uniprot:F1NI05
Length = 1007
Score = 341 (125.1 bits), Expect = 8.8e-30, P = 8.8e-30
Identities = 61/98 (62%), Positives = 77/98 (78%)
Query: 200 ATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGST 259
AT+IR++L+RLNTF DE+F DP VL+SY+YAI+D +VG RCKCNGHASEC +R G
Sbjct: 1 ATDIRVSLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASEC--IRNELG-- 56
Query: 260 RRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-DDANEC 296
+ VC C+HNT G DC +C PF+ND PWRRA+ + ANEC
Sbjct: 57 KLVCNCKHNTFGDDCEKCLPFFNDRPWRRATAESANEC 94
>RGD|1307089 [details] [associations]
symbol:Ntng2 "netrin G2" species:10116 "Rattus norvegicus"
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0046658 "anchored to plasma
membrane" evidence=IEA;ISO] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 RGD:1307089 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 EMBL:CH474001
GeneTree:ENSGT00700000104042 CTD:84628 KO:K16359 IPI:IPI00561682
RefSeq:NP_001101295.1 UniGene:Rn.218540 Ensembl:ENSRNOT00000045919
GeneID:311836 KEGG:rno:311836 UCSC:RGD:1307089 NextBio:664255
Uniprot:D4A9F4
Length = 564
Score = 333 (122.3 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 96/286 (33%), Positives = 132/286 (46%)
Query: 25 GYQNGVPQPTRFCVQSGTHVTANTCDYCYED-THPVRYLTDLSNT--TTWWQSTTMYDGV 81
G G P P RFC ++ +N CD D HP R + D + T+WQS T +
Sbjct: 58 GITCGDP-PERFCSHENPYLCSNECDASNPDLAHPPRLMFDREDEGLATYWQSVT-WSRY 115
Query: 82 QWPNQVNITLKFGKTFDVTY-VRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETY 140
P + NITL + K+ ++T V + F RP + K +W P+QFY+ C E +
Sbjct: 116 PSPLEANITLSWNKSVELTDDVVMTFEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAF 175
Query: 141 GLPDDNSGKANDSDT-RVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSY-------NL 192
G+ + + S RV CT EYS + E R R F+ NL
Sbjct: 176 GMSARRARDMSPSSAHRVLCTEEYSRWAG--SKKEKHVRFEVRDRFAIFAGPDLRNMDNL 233
Query: 193 --------NLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNG 244
L+EF T T++R+ L L ++ L YFYAI++I V RCKCN
Sbjct: 234 YTRMESAKGLKEFFTFTDLRMRL--LRPALGGTYVQRENLYKYFYAISNIEVIGRCKCNL 291
Query: 245 HASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
HA+ C VR+ GS + C CEHNT GPDC +C + WR S
Sbjct: 292 HANLCT-VRE--GSLQ--CECEHNTTGPDCGKCKKNFRTRAWRAGS 332
>UNIPROTKB|F1S0U7 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:CU550727 ProteinModelPortal:F1S0U7
Ensembl:ENSSSCT00000006293 Uniprot:F1S0U7
Length = 532
Score = 315 (115.9 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 89/273 (32%), Positives = 128/273 (46%)
Query: 38 VQSGTHVTANTCDYCYED-THPVRYLTDLSNT--TTWWQSTTMYDGVQWPNQVNITLKFG 94
+Q ++ +N CD D HP R + D + T+WQS T + P + NITL +
Sbjct: 7 LQENPYLCSNECDASNPDLAHPPRLMFDREDEGLATYWQSVT-WSRYPSPLEANITLSWN 65
Query: 95 KTFDVTY-VRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDS 153
K+ ++T V + F RP + K +W P+QFY+ C E +G+P + + S
Sbjct: 66 KSVELTDDVVVTFEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFGMPARRARDLSAS 125
Query: 154 DT-RVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSY-------NL--------NLQEF 197
RV CT EYS + E R R F+ NL L++F
Sbjct: 126 GAHRVLCTEEYSRWAG--SKKEKHVRFEVRDRFAIFAGPELRNMDNLYTRLESAKGLKDF 183
Query: 198 VTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDG 257
T T++R+ L L ++ L YFYAI++I V RCKCN HA+ C VR+ G
Sbjct: 184 FTLTDLRMRL--LRPALGGTYVQRENLYKYFYAISNIEVTGRCKCNLHANLCS-VRE--G 238
Query: 258 STRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
S + C C+HNT GPDC +C + WR S
Sbjct: 239 SLQ--CECDHNTTGPDCGKCKRSFRTRSWRAGS 269
Score = 37 (18.1 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 278 APFYNDAPWRRASDDA 293
AP + APW + + A
Sbjct: 298 APLWASAPWPQVASSA 313
>UNIPROTKB|F1MNT4 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 EMBL:DAAA02010597 EMBL:DAAA02010596 IPI:IPI01017612
Ensembl:ENSBTAT00000015166 OMA:NTWQLAS Uniprot:F1MNT4
Length = 1798
Score = 341 (125.1 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 92/298 (30%), Positives = 145/298 (48%)
Query: 21 TNTCGYQNGVPQPTRFCVQSGTHVTANT-CDYC-----YEDT-HPVRYLTDLSNTT---- 69
T+TCG P+P +C+ S H+ + C C Y +T +P +L + TT
Sbjct: 65 TSTCGLHK--PEP--YCIVS--HLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPN 118
Query: 70 ---TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSW 126
WWQS +GV+ V I L F T++ + F + RP + I + + +W
Sbjct: 119 RLKIWWQSE---NGVE---NVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTW 172
Query: 127 TPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAK 186
+++++ C+ ++ P ++G D + C S YSD+ P T G V F L+ +R +
Sbjct: 173 GVYRYFAYDCESSF--PGISTGPMKKVDD-IICDSRYSDIEPSTEGEVIFRALDPAFRIE 229
Query: 187 TFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNG 244
Y+ +Q + T +RI +L+T D L LD + Y+YA+ D+ V C C G
Sbjct: 230 D-PYSPRIQNLLKITNLRIKFVKLHTLGDNL-LDSRMEIREKYYYAVYDMVVRGNCFCYG 287
Query: 245 HASECPYV----RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
HASEC V + +G C C HNT G +C +C FY+D PWR A ++N C+
Sbjct: 288 HASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACK 345
>UNIPROTKB|F1SAE9 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:NTWQLAS EMBL:CU929844
Ensembl:ENSSSCT00000016825 Uniprot:F1SAE9
Length = 1799
Score = 341 (125.1 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 93/299 (31%), Positives = 146/299 (48%)
Query: 21 TNTCGYQNGVPQPTRFCVQSGTHVTANT-CDYC-----YEDT-HPVRYLTDLSNTT---- 69
T+TCG P+P +C+ S H+ + C C Y +T +P +L + TT
Sbjct: 66 TSTCGLHK--PEP--YCIVS--HLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPN 119
Query: 70 ---TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSW 126
WWQS +GV+ V I L F T++ + F + RP + I + + +W
Sbjct: 120 RLKIWWQSE---NGVE---NVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGRTW 173
Query: 127 TPFQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRA 185
+++++ C+ ++ G+P K +D + C S YSD+ P T G V F L+ +R
Sbjct: 174 GVYRYFAYDCESSFPGIPTGPMKKVDD----IICDSRYSDIEPSTEGEVIFRALDPAFRI 229
Query: 186 KTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCN 243
+ Y+ +Q + T +RI +L+T D L LD + Y+YA+ D+ V C C
Sbjct: 230 ED-PYSPRIQNLLKITNLRIKFVKLHTLGDNL-LDSRMEIREKYYYAVYDMVVRGNCFCY 287
Query: 244 GHASEC-P---YVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
GHASEC P + + +G C C HNT G +C C FY+D PWR A ++N C+
Sbjct: 288 GHASECAPVDGFSEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACK 346
>MGI|MGI:2159341 [details] [associations]
symbol:Ntng2 "netrin G2" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 MGI:MGI:2159341 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186 EMBL:CH466542
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
eggNOG:NOG286598 HOVERGEN:HBG052676 CTD:84628 HOGENOM:HOG000231614
KO:K16359 OrthoDB:EOG47D9FR EMBL:AB052336 EMBL:AB052337
EMBL:AB052338 EMBL:AF475079 EMBL:AF475080 EMBL:AL772379
IPI:IPI00311068 IPI:IPI00311069 IPI:IPI00625609 RefSeq:NP_598007.1
RefSeq:NP_598008.1 UniGene:Mm.442448 ProteinModelPortal:Q8R4F1
SMR:Q8R4F1 STRING:Q8R4F1 PRIDE:Q8R4F1 Ensembl:ENSMUST00000048455
Ensembl:ENSMUST00000091153 Ensembl:ENSMUST00000102873 GeneID:171171
KEGG:mmu:171171 InParanoid:A2AKX0 OMA:QPRCDPA ChiTaRS:NTNG2
NextBio:370580 Bgee:Q8R4F1 CleanEx:MM_NTNG2 Genevestigator:Q8R4F1
GermOnline:ENSMUSG00000035513 Uniprot:Q8R4F1
Length = 589
Score = 331 (121.6 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 96/286 (33%), Positives = 131/286 (45%)
Query: 25 GYQNGVPQPTRFCVQSGTHVTANTCDYCYED-THPVRYLTDLSNT--TTWWQSTTMYDGV 81
G G P P RFC ++ +N CD D HP R + D + T+WQS T +
Sbjct: 58 GITCGDP-PERFCSHENPYLCSNECDASNPDLAHPPRLMFDREDEGLATYWQSVT-WSRY 115
Query: 82 QWPNQVNITLKFGKTFDVTY-VRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETY 140
P + NITL + K+ ++T V + F RP + K +W P+QFY+ C E +
Sbjct: 116 PSPLEANITLSWNKSVELTDDVVVTFEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAF 175
Query: 141 GLPDDNSGKANDSDT-RVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSY-------NL 192
G+ + + S RV CT EYS + E R R F+ NL
Sbjct: 176 GMSARRARDMSPSSAHRVLCTEEYSRWAG--SKKEKHVRFEVRDRFAIFAGPDLRNMDNL 233
Query: 193 --------NLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNG 244
L+EF T T++R+ L L ++ L YFYAI++I V RCKCN
Sbjct: 234 YTRMESAKGLKEFFTFTDLRMRL--LRPALGGTYVQRENLYKYFYAISNIEVIGRCKCNL 291
Query: 245 HASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
HA+ C VR+ GS + C CEHNT GPDC C + WR S
Sbjct: 292 HANLCT-VRE--GSLQ--CECEHNTTGPDCGRCKKNFRTRAWRAGS 332
>UNIPROTKB|A4D0S4 [details] [associations]
symbol:LAMB4 "Laminin subunit beta-4" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
EMBL:CH236947 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:22798 eggNOG:NOG303831 KO:K06245
EMBL:AF028816 EMBL:AC005048 EMBL:BC045172 EMBL:BC140804
EMBL:BC142619 EMBL:AK075165 IPI:IPI00295437 IPI:IPI00852842
IPI:IPI00927194 RefSeq:NP_031382.2 UniGene:Hs.62022
ProteinModelPortal:A4D0S4 SMR:A4D0S4 IntAct:A4D0S4 STRING:A4D0S4
PhosphoSite:A4D0S4 PaxDb:A4D0S4 PRIDE:A4D0S4
Ensembl:ENST00000205386 Ensembl:ENST00000388780
Ensembl:ENST00000388781 Ensembl:ENST00000422975 GeneID:22798
KEGG:hsa:22798 UCSC:uc003vey.2 GeneCards:GC07M107663 HGNC:HGNC:6491
HPA:HPA020242 HPA:HPA024247 neXtProt:NX_A4D0S4 PharmGKB:PA30279
OMA:CHPQGSK OrthoDB:EOG46DM1W ChiTaRS:LAMB4 GenomeRNAi:22798
NextBio:43142 ArrayExpress:A4D0S4 Bgee:A4D0S4 CleanEx:HS_LAMB4
Genevestigator:A4D0S4 Uniprot:A4D0S4
Length = 1761
Score = 340 (124.7 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 80/237 (33%), Positives = 119/237 (50%)
Query: 71 WWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQ 130
WWQS D V+I L F +++ L F + RP + + + T +W F+
Sbjct: 104 WWQSENGLD------HVSIRLDLEALFRFSHLILTFKTFRPAAMLVERSTDYGHNWKVFK 157
Query: 131 FYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSY 190
+++ C ++ P+ SG+A + C S+YSD+ P TGG V L+ + + Y
Sbjct: 158 YFAKDCATSF--PNITSGQAQGVGD-IVCDSKYSDIEPSTGGEVVLKVLDPSFEIEN-PY 213
Query: 191 NLNLQEFVTATEIRITLDRLNTFYDELF--LDPSVLRSYFYAIADISVGARCKCNGHASE 248
+ +Q+ VT T +RI +L+T D L L Y+YA+ ++ V C CNGHASE
Sbjct: 214 SPYIQDLVTLTNLRINFTKLHTLGDALLGRRQNDSLDKYYYALYEMIVRGSCFCNGHASE 273
Query: 249 C-PYVR-QSD-----GSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
C P + + D G C C+HNT GP+C C F+ DAPWR A+D N CR
Sbjct: 274 CRPMQKMRGDVFSPPGMVHGQCVCQHNTDGPNCERCKDFFQDAPWRPAADLQDNACR 330
>UNIPROTKB|Q01635 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9031 "Gallus
gallus" [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0031175 "neuron projection development"
evidence=ISS] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=ISS] [GO:0005201 "extracellular matrix
structural constituent" evidence=ISS] [GO:0005604 "basement
membrane" evidence=ISS] [GO:0005606 "laminin-1 complex"
evidence=ISS] [GO:0005607 "laminin-2 complex" evidence=ISS]
[GO:0005615 "extracellular space" evidence=ISS] [GO:0043257
"laminin-8 complex" evidence=ISS] [GO:0043259 "laminin-10 complex"
evidence=ISS] [GO:0007162 "negative regulation of cell adhesion"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] GO:GO:0048471 GO:GO:0005615 PROSITE:PS00022
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0005201 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259
EMBL:L00962 IPI:IPI00593712 PIR:B45067 UniGene:Gga.53713
STRING:Q01635 eggNOG:NOG241384 HOGENOM:HOG000007552
HOVERGEN:HBG082837 InParanoid:Q01635 OrthoDB:EOG44BB1B
GO:GO:0005607 GO:GO:0043257 Uniprot:Q01635
Length = 303
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 73/234 (31%), Positives = 119/234 (50%)
Query: 71 WWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQ 130
WWQS +G++ V I L F T++ + F + RP + I + + +W ++
Sbjct: 43 WWQSE---NGLE---NVTIQLNLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWQVYR 96
Query: 131 FYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSY 190
+++ C+ ++ P ++G D + C S YSD+ P T G V + L+ +R + Y
Sbjct: 97 YFAYDCESSF--PGISTGPMKKVDD-IICDSRYSDIEPSTEGEVIYRVLDPAFRIED-PY 152
Query: 191 NLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNGHASE 248
+ +Q + T +R+ +L+T D L LD + Y+YAI D+ V C C GHASE
Sbjct: 153 SPRIQNLLKITNLRVKFTKLHTLGDNL-LDSRMEIREKYYYAIYDMVVRGNCFCYGHASE 211
Query: 249 C-P---YVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
C P + + +G C C HNT G +C +C FY+D PWR A ++N C+
Sbjct: 212 CAPVEGFSEEVEGMVHGHCMCRHNTKGLNCEQCLDFYHDLPWRPAEGRNSNACK 265
>ZFIN|ZDB-GENE-081030-4 [details] [associations]
symbol:lamb2 "laminin, beta 2 (laminin S)"
species:7955 "Danio rerio" [GO:0016203 "muscle attachment"
evidence=IMP] [GO:0070831 "basement membrane assembly"
evidence=IMP] [GO:0061053 "somite development" evidence=IMP]
ZFIN:ZDB-GENE-081030-4 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 HOGENOM:HOG000007552
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:3913 KO:K06243 OrthoDB:EOG4KSPHW
EMBL:AL953864 IPI:IPI00499348 RefSeq:NP_001229974.1
UniGene:Dr.158661 UniGene:Dr.78258 Ensembl:ENSDART00000012166
Ensembl:ENSDART00000147326 GeneID:337767 KEGG:dre:337767
NextBio:20812405 Uniprot:B7ZDA6
Length = 1782
Score = 339 (124.4 bits), Expect = 3.5e-29, P = 3.5e-29
Identities = 93/304 (30%), Positives = 150/304 (49%)
Query: 16 ASVESTNTCGYQNGVPQPTRFCVQSGTHVTANT-CDYC-----YE-DTHPVRYLTDLSNT 68
A++++++TCG + P +C+ S H+ C C Y+ ++PV + + T
Sbjct: 44 ANLKASSTCGLRRREP----YCIVS--HLQEEKKCFQCDSRRPYDPQSNPVSHRIENVIT 97
Query: 69 T-------TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTY 121
T +WWQS +G + V + L F T++ + F + RP + I +
Sbjct: 98 TFKPHRKKSWWQSE---NG---KSDVYLQLDLEAEFHFTHLIMTFKTFRPAAMLIERSAD 151
Query: 122 ENSSWTPFQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLE 180
SW +++++ C+ + G+ D+ K +D V C S YSD+ P T G V F L+
Sbjct: 152 FGRSWQVYRYFANDCESIFPGISQDSLRKVDD----VICESRYSDIEPSTEGEVIFRVLD 207
Query: 181 GRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLD--PSVLRSYFYAIADISVGA 238
R + Y+ +Q + T +R+ L +L+T D L LD P + Y+YA+ ++ V
Sbjct: 208 PAIRIED-PYSPRIQNQLKITNLRLNLTKLHTLGDNL-LDSRPEIKEKYYYAMYELVVRG 265
Query: 239 RCKCNGHASEC-PY--VRQS-DGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DA 293
C C GHASEC P +R +G C C+HNT G +C +C FYND PWR A +
Sbjct: 266 NCFCYGHASECAPIEGIRDDIEGMVHGRCVCKHNTKGLNCEQCDDFYNDLPWRPAEGRNT 325
Query: 294 NECR 297
N C+
Sbjct: 326 NACK 329
>UNIPROTKB|E2QZY0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277 KO:K06845
OMA:RSQDFGK EMBL:AAEX03009952 EMBL:AAEX03009953 RefSeq:XP_532655.2
Ensembl:ENSCAFT00000010328 GeneID:475431 KEGG:cfa:475431
Uniprot:E2QZY0
Length = 628
Score = 330 (121.2 bits), Expect = 4.3e-29, P = 4.3e-29
Identities = 98/318 (30%), Positives = 143/318 (44%)
Query: 2 DNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS-GTHVTANT--CDYCYE-DTH 57
+ C P N A + + TCG QN +C S T +T CD C H
Sbjct: 31 EKACNPRMGNLALGRKLWADTTCG-QNATEL---YCSYSENTDLTCRQPKCDKCNAAQPH 86
Query: 58 PVRYLTDLSNTT-----TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPE 112
+++++ TWWQS + V ++ I L F T++ ++F SPRP
Sbjct: 87 LAHLPAAMADSSFRFPRTWWQSA---EDV---HREKIQLDLEAEFYFTHLIMVFKSPRPA 140
Query: 113 SFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
+ + + +W P+++++ +C T+GL DD K CTS YS P TGG
Sbjct: 141 AMVLDRSQDFGKTWKPYKYFATNCSTTFGLEDDVFKKG------AICTSRYSHPFPCTGG 194
Query: 173 AVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYF--YA 230
V F L Y A+ Y+ +QE + T +R+ L + + + D + +F YA
Sbjct: 195 EVIFRALSPPYDAEN-PYSAKVQEQLKITNLRVQLLKRQSCPCQRN-DLTAKPQHFTHYA 252
Query: 231 IADISVGARCKCNGHASECPYVR-----QSDGSTRRV---CRCEHNTAGPDCNECAPFYN 282
I D V C CNGHA +C V ++ G+ V C C+HNTAG C CAP YN
Sbjct: 253 IYDFIVKGSCFCNGHADQCIPVDGFRPVKAPGAFHVVHGKCMCKHNTAGTHCQHCAPLYN 312
Query: 283 DAPWRRA---SDDANECR 297
D PW A + ECR
Sbjct: 313 DRPWEAADGKTGSPKECR 330
Score = 116 (45.9 bits), Expect = 0.00074, P = 0.00074
Identities = 26/64 (40%), Positives = 34/64 (53%)
Query: 240 CKCNGHASECPY---VRQSDGS-TRRVCR-CEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
CKCNGHA C + V ++ G+ + VC C+HNT G C C P FY D RR
Sbjct: 332 CKCNGHADTCHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDL--RRPFSAP 389
Query: 294 NECR 297
+ C+
Sbjct: 390 DACK 393
>ZFIN|ZDB-GENE-021226-1 [details] [associations]
symbol:lamb1a "laminin, beta 1a" species:7955 "Danio
rerio" [GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
ZFIN:ZDB-GENE-021226-1 GO:GO:0048471 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007517 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 HSSP:P02468
GO:GO:0050908 GO:GO:0031290 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0007634 HOGENOM:HOG000007552
KO:K05636 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
EMBL:AF468049 IPI:IPI00485526 RefSeq:NP_775382.1 UniGene:Dr.76526
ProteinModelPortal:Q8JHV7 STRING:Q8JHV7 PRIDE:Q8JHV7 GeneID:286830
KEGG:dre:286830 CTD:286830 NextBio:20806481 Bgee:Q8JHV7
Uniprot:Q8JHV7
Length = 1785
Score = 336 (123.3 bits), Expect = 7.3e-29, P = 7.3e-29
Identities = 91/298 (30%), Positives = 140/298 (46%)
Query: 20 STNTCGYQNGVPQPTRFCVQSGTHVTAN--TCD--YCYEDT-HPV--RYLTDLSNT---- 68
+T+TCG P+P FC+ S CD Y +T H V + ++ T
Sbjct: 48 ATSTCGVHK--PEP--FCIVSHLQEEKKCFVCDSRQAYNETAHQVTSHSIENVVTTFAPN 103
Query: 69 --TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSW 126
TWWQS +G++ V I L F T++ + F + RP + I + ++W
Sbjct: 104 RLKTWWQSE---NGLE---NVTIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSADFGNTW 157
Query: 127 TPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAK 186
+++++ C+ ++ P + G D V C + YSD+ P T G V F L+ +R +
Sbjct: 158 QVYRYFAYDCESSF--PSVSHGPMTKVDD-VICDTRYSDIEPSTEGEVIFRVLDPAFRIE 214
Query: 187 TFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNG 244
Y+ +Q + T +R+ +L+T D L LD + Y+YAI D+ V C C G
Sbjct: 215 D-PYSPRIQNMLKITNLRVKFTKLHTLGDNL-LDSRIEIKEKYYYAIYDMVVRGNCFCYG 272
Query: 245 HASECPYVRQS----DGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
HASEC V + +G C C HNT G +C C FY+D PWR A + N C+
Sbjct: 273 HASECAPVDGTGEAVEGMVHGHCMCNHNTIGLNCERCQDFYHDLPWRPAEGRNTNACK 330
>UNIPROTKB|A7MB18 [details] [associations]
symbol:NTN4 "NTN4 protein" species:9913 "Bos taurus"
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=IEA] [GO:0043237 "laminin-1 binding" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277
eggNOG:NOG329215 HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 HOGENOM:HOG000060085 OrthoDB:EOG4M0F17
EMBL:DAAA02013606 EMBL:DAAA02013607 EMBL:BC151286 IPI:IPI00697984
RefSeq:NP_001095673.1 UniGene:Bt.26919 Ensembl:ENSBTAT00000004136
GeneID:537455 KEGG:bta:537455 InParanoid:A7MB18 NextBio:20877139
Uniprot:A7MB18
Length = 627
Score = 326 (119.8 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 100/317 (31%), Positives = 138/317 (43%)
Query: 2 DNRCIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQS-GTHVTANT--CDYCYED--- 55
+ C P N A + + TCG QN +C S T +T CD C
Sbjct: 31 EKACNPRMGNLALGRKLWTDTTCG-QNATEL---YCFYSENTDLTCQQPKCDKCNAAQPH 86
Query: 56 -THPVRYLTDLS--NTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPE 112
H + D S TWWQS + V ++ I L F T++ ++F SPRP
Sbjct: 87 LAHLPAAMADSSFRYPRTWWQSA---EDV---HREKIQLDLEAEFYFTHLIMVFKSPRPA 140
Query: 113 SFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
+ + + +W P+++++ +C T+GL DD K CTS YS+ P TGG
Sbjct: 141 AMVLDRSQDFGKTWKPYKYFATNCSATFGLEDDVVKKG------AICTSRYSNPFPCTGG 194
Query: 173 AVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITL-DRLNTFYDELFLDPSVLRSYFYAI 231
V F L + Y +QE + T +R+ L R + L+ YAI
Sbjct: 195 EVIFRALSPPNDMEN-PYGAKVQEQLKITNLRVQLLKRQSCPCQRNHLNAEPQHFTHYAI 253
Query: 232 ADISVGARCKCNGHASEC-PY--VR--QSDGSTRRV---CRCEHNTAGPDCNECAPFYND 283
D V C CNGHA +C P R ++ G+ V C C+HNTAG C CAP YND
Sbjct: 254 YDFIVKGSCFCNGHADQCIPIDGFRPVKAPGAFHVVHGKCICKHNTAGTHCQHCAPLYND 313
Query: 284 APWRRA---SDDANECR 297
PW A + NECR
Sbjct: 314 RPWEAADGKTGSPNECR 330
>MGI|MGI:96743 [details] [associations]
symbol:Lamb1 "laminin B1" species:10090 "Mus musculus"
[GO:0005178 "integrin binding" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=IDA]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005607
"laminin-2 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IDA] [GO:0007566
"embryo implantation" evidence=IMP] [GO:0007611 "learning or
memory" evidence=NAS] [GO:0016477 "cell migration" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0030335 "positive
regulation of cell migration" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0031175 "neuron projection
development" evidence=ISO;IDA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=ISO] [GO:0042476
"odontogenesis" evidence=ISO] [GO:0043208 "glycosphingolipid
binding" evidence=IDA] [GO:0043256 "laminin complex" evidence=IDA]
[GO:0043257 "laminin-8 complex" evidence=ISO] [GO:0043259
"laminin-10 complex" evidence=ISO;IPI] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:96743 GO:GO:0048471
GO:GO:0016477 GO:GO:0007155 PROSITE:PS00022 GO:GO:0007611
Reactome:REACT_127416 GO:GO:0005178 PROSITE:PS01186 GO:GO:0007162
GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0031175 GO:GO:0042476
GO:GO:0007566 InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384
OrthoDB:EOG44BB1B GO:GO:0005607 GO:GO:0043257
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 ChiTaRS:LAMB1 EMBL:M15525 EMBL:CR974423
EMBL:CT571245 EMBL:X05212 IPI:IPI00988644 PIR:A26413
UniGene:Mm.172674 PDB:4AQS PDBsum:4AQS ProteinModelPortal:P02469
SMR:P02469 MINT:MINT-1206337 STRING:P02469 PhosphoSite:P02469
PaxDb:P02469 PRIDE:P02469 Ensembl:ENSMUST00000169088
InParanoid:P02469 Bgee:P02469 CleanEx:MM_LAMB1-1
Genevestigator:P02469 GermOnline:ENSMUSG00000002900 Uniprot:P02469
Length = 1786
Score = 333 (122.3 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 91/298 (30%), Positives = 144/298 (48%)
Query: 21 TNTCGYQNGVPQPTRFCVQSGTHVTANT-CDYC-----YEDT-HPVRYLTDLSNTT---- 69
T+TCG P+P +C+ S H+ + C C Y +T +P +L + TT
Sbjct: 53 TSTCGLHK--PEP--YCIVS--HLQEDKKCFICDSRDPYHETLNPDSHLIENVVTTFAPN 106
Query: 70 ---TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSW 126
WWQS +GV+ V I L F T++ + F + RP + I + + +W
Sbjct: 107 RLKIWWQSE---NGVE---NVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKAW 160
Query: 127 TPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAK 186
+++++ C+ ++ P ++G D + C S YSD+ P T G V F L+ ++ +
Sbjct: 161 GVYRYFAYDCESSF--PGISTGPMKKVDD-IICDSRYSDIEPSTEGEVIFRALDPAFKIE 217
Query: 187 TFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNG 244
Y+ +Q + T +RI +L+T D L LD + Y+YA+ D+ V C C G
Sbjct: 218 D-PYSPRIQNLLKITNLRIKFVKLHTLGDNL-LDSRMEIREKYYYAVYDMVVRGNCFCYG 275
Query: 245 HASECPYV----RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
HASEC V + +G C C HNT G +C C FY+D PWR A ++N C+
Sbjct: 276 HASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACK 333
>UNIPROTKB|P07942 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9606 "Homo
sapiens" [GO:0005178 "integrin binding" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0043257
"laminin-8 complex" evidence=IDA;TAS] [GO:0005607 "laminin-2
complex" evidence=IDA;TAS] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0042476 "odontogenesis"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA;TAS]
[GO:0005198 "structural molecule activity" evidence=NAS]
[GO:0005606 "laminin-1 complex" evidence=IDA;TAS;IPI] [GO:0030335
"positive regulation of cell migration" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IDA] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=TAS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS] GO:GO:0048471
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0016477 GO:GO:0070062 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0042476 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
EMBL:CH236947 GO:GO:0050679 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 DrugBank:DB00015 GO:GO:0005201 GO:GO:0043208
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384 HOGENOM:HOG000007552
GO:GO:0005607 GO:GO:0043257 KO:K05636 InterPro:IPR013015
PROSITE:PS51116 EMBL:M61951 EMBL:M58147 EMBL:M61917 EMBL:M61918
EMBL:M61921 EMBL:M61922 EMBL:M61923 EMBL:M61924 EMBL:M61925
EMBL:M61926 EMBL:M61927 EMBL:M61928 EMBL:M61929 EMBL:M61930
EMBL:M61931 EMBL:M61932 EMBL:M61933 EMBL:M61934 EMBL:M61935
EMBL:M61936 EMBL:M61938 EMBL:M61939 EMBL:M61940 EMBL:M61941
EMBL:M61942 EMBL:M61943 EMBL:M61944 EMBL:M61945 EMBL:M61946
EMBL:M61947 EMBL:M61948 EMBL:M61949 EMBL:M61950 EMBL:M55370
EMBL:M55378 EMBL:M55365 EMBL:M55371 EMBL:M55372 EMBL:M55373
EMBL:M55374 EMBL:M55375 EMBL:M55376 EMBL:M55344 EMBL:M55345
EMBL:M55346 EMBL:M55347 EMBL:M55348 EMBL:M55349 EMBL:M55350
EMBL:M55351 EMBL:M55352 EMBL:M55353 EMBL:M55355 EMBL:M55356
EMBL:M55357 EMBL:M55358 EMBL:M55359 EMBL:M55360 EMBL:M55361
EMBL:M55362 EMBL:M55363 EMBL:M55364 EMBL:M55366 EMBL:M55367
EMBL:M55368 EMBL:M55369 EMBL:M61916 EMBL:BC113455 EMBL:M20206
IPI:IPI00013976 PIR:S13547 RefSeq:NP_002282.2 UniGene:Hs.650585
ProteinModelPortal:P07942 SMR:P07942 IntAct:P07942
MINT:MINT-2860329 STRING:P07942 PhosphoSite:P07942 DMDM:126366
PaxDb:P07942 PRIDE:P07942 Ensembl:ENST00000222399 GeneID:3912
KEGG:hsa:3912 UCSC:uc003vev.2 CTD:3912 GeneCards:GC07M107564
H-InvDB:HIX0025323 HGNC:HGNC:6486 HPA:CAB004256 HPA:HPA004056
HPA:HPA004132 MIM:150240 neXtProt:NX_P07942 PharmGKB:PA30275
HOVERGEN:HBG052301 PhylomeDB:P07942 ChiTaRS:LAMB1 GenomeRNAi:3912
NextBio:15367 ArrayExpress:P07942 Bgee:P07942 CleanEx:HS_LAMB1
Genevestigator:P07942 GermOnline:ENSG00000091136 Uniprot:P07942
Length = 1786
Score = 332 (121.9 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 91/298 (30%), Positives = 144/298 (48%)
Query: 21 TNTCGYQNGVPQPTRFCVQSGTHVTANT-CDYC-----YEDT-HPVRYLTDLSNTT---- 69
T+TCG P+P +C+ S H+ + C C Y +T +P +L + TT
Sbjct: 53 TSTCGLHK--PEP--YCIVS--HLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPN 106
Query: 70 ---TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSW 126
WWQS +GV+ V I L F T++ + F + RP + I + + +W
Sbjct: 107 RLKIWWQSE---NGVE---NVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTW 160
Query: 127 TPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAK 186
+++++ C+ ++ P ++G D + C S YSD+ P T G V F L+ ++ +
Sbjct: 161 GVYRYFAYDCEASF--PGISTGPMKKVDD-IICDSRYSDIEPSTEGEVIFRALDPAFKIE 217
Query: 187 TFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNG 244
Y+ +Q + T +RI +L+T D L LD + Y+YA+ D+ V C C G
Sbjct: 218 D-PYSPRIQNLLKITNLRIKFVKLHTLGDNL-LDSRMEIREKYYYAVYDMVVRGNCFCYG 275
Query: 245 HASECPYV----RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
HASEC V + +G C C HNT G +C C FY+D PWR A ++N C+
Sbjct: 276 HASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACK 333
>RGD|1306311 [details] [associations]
symbol:Lamb1 "laminin, beta 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005178 "integrin
binding" evidence=ISO] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005605 "basal lamina" evidence=ISO] [GO:0005606 "laminin-1
complex" evidence=ISO] [GO:0005607 "laminin-2 complex"
evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007162 "negative regulation of cell adhesion" evidence=ISO]
[GO:0007566 "embryo implantation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016477 "cell migration"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030335 "positive regulation of cell migration" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0043208
"glycosphingolipid binding" evidence=ISO] [GO:0043256 "laminin
complex" evidence=ISO] [GO:0043257 "laminin-8 complex"
evidence=ISO] [GO:0043259 "laminin-10 complex" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0070062 "extracellular vesicular exosome" evidence=ISO]
RGD:1306311 GO:GO:0048471 GO:GO:0005615 GO:GO:0016477 GO:GO:0007162
GO:GO:0030335 GO:GO:0031012 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 OrthoDB:EOG44BB1B GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 IPI:IPI00365542
Ensembl:ENSRNOT00000008321 UCSC:RGD:1306311 ArrayExpress:D3ZQN7
Uniprot:D3ZQN7
Length = 1834
Score = 332 (121.9 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 90/298 (30%), Positives = 144/298 (48%)
Query: 21 TNTCGYQNGVPQPTRFCVQSGTHVTANT-CDYC-----YEDT-HPVRYLTDLSNTT---- 69
T+TCG P+P +C+ S H+ + C C Y +T +P +L + TT
Sbjct: 101 TSTCGLHK--PEP--YCIVS--HLQEDKKCFICDSRDPYHETLNPDSHLIENVVTTFAPN 154
Query: 70 ---TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSW 126
WWQS +GV+ V + L F T++ + F + RP + I + + +W
Sbjct: 155 RLKIWWQSE---NGVE---NVTVQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTW 208
Query: 127 TPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAK 186
+++++ C+ ++ P ++G D + C S YSD+ P T G V F L+ ++ +
Sbjct: 209 GVYRYFAYDCESSF--PGISTGPMKKVDD-IICDSRYSDIEPSTEGEVIFRALDPAFKIE 265
Query: 187 TFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNG 244
Y+ +Q + T +RI +L+T D L LD + Y+YA+ D+ V C C G
Sbjct: 266 D-PYSPRIQNLLKITNLRIKFVKLHTLGDNL-LDSRMEIREKYYYAVYDMVVRGNCFCYG 323
Query: 245 HASECPYV----RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
HASEC V + +G C C HNT G +C C FY+D PWR A ++N C+
Sbjct: 324 HASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACK 381
>FB|FBgn0261563 [details] [associations]
symbol:wb "wing blister" species:7227 "Drosophila
melanogaster" [GO:0005605 "basal lamina" evidence=ISS;NAS;IDA]
[GO:0005604 "basement membrane" evidence=ISS] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007502 "digestive tract mesoderm development" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0008406
EMBL:AE014134 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007476 Pfam:PF02210 HSSP:P00740 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GO:GO:0007502 GO:GO:0005606 FlyBase:FBgn0261563
ChiTaRS:wb RefSeq:NP_723870.1 ProteinModelPortal:Q8IP51 SMR:Q8IP51
STRING:Q8IP51 PRIDE:Q8IP51 EnsemblMetazoa:FBtr0302731 GeneID:43946
KEGG:dme:Dmel_CG42677 UCSC:CG15288-RB CTD:43946 InParanoid:Q8IP51
OMA:CNCNAYG GenomeRNAi:43946 NextBio:836431 ArrayExpress:Q8IP51
Bgee:Q8IP51 Uniprot:Q8IP51
Length = 3375
Score = 311 (114.5 bits), Expect = 7.9e-28, Sum P(2) = 7.9e-28
Identities = 89/306 (29%), Positives = 141/306 (46%)
Query: 7 PPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYCYEDTHPVRYLTDLS 66
PP N A + TCG QNG + +C Q G C+ D R + L
Sbjct: 155 PPLFNVVPRAQISVNATCG-QNGAEE---YCKQVGAK-PCGICNAHSSDRAKQRSIQSLI 209
Query: 67 NTTT-----------WWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFW-SPRPESF 114
++ + WWQS T+ G Q+ V I L +TF + V L SPRP S+
Sbjct: 210 SSGSGSGSGSGFEEGWWQSPTLQGGRQF-EYVTILLDLKQTFQIFSVWLKSANSPRPASW 268
Query: 115 AIYKKTYENSSWTPFQFYS---ASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTG 171
I +K+ + ++ P+Q++ A CQ + L N +DT + C++++S PL
Sbjct: 269 -ILEKSLDGINFEPWQYFGLSDADCQRRWNLSGQNGKYVFQNDTEIICSTQFSKPGPLEN 327
Query: 172 GAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDE-----LFLD-PSVLR 225
G + + L+ R A S L +F+T IRI L +++ ++ LD PS+ +
Sbjct: 328 GVLHASLLKNRPGATDQSPEL--MKFITTRYIRIRLQGMHSTANQDNSLDWLLDSPSLEK 385
Query: 226 SYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAP 285
FY+++ + V AR CNGHA+ +S C C+HNT G C +C P + D P
Sbjct: 386 HSFYSLSQLKVSARLDCNGHANRS---HESPDDPLMQCICQHNTCGAQCEQCCPLFQDRP 442
Query: 286 WRRASD 291
++ +
Sbjct: 443 YQMGGE 448
Score = 52 (23.4 bits), Expect = 7.9e-28, Sum P(2) = 7.9e-28
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAPWR-RASDDANECR 297
C C N G C++C P + W A + +CR
Sbjct: 1169 CACLANVTGRRCDKCRPGH----WNLTAGEGCRDCR 1200
Score = 41 (19.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 9/34 (26%), Positives = 11/34 (32%)
Query: 263 CRCEHNTAGPDCNECAPFYNDAPWRRASDDANEC 296
C C+ G C C Y P R + C
Sbjct: 1740 CVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPC 1773
>UNIPROTKB|E1C700 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005608
"laminin-3 complex" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA]
GO:GO:0050808 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005608 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:QPYCIVS EMBL:AADN02014165 EMBL:AADN02014166
EMBL:AADN02014167 EMBL:AADN02014168 EMBL:AADN02014169
EMBL:AADN02014170 IPI:IPI00820014 ProteinModelPortal:E1C700
Ensembl:ENSGALT00000036239 ArrayExpress:E1C700 Uniprot:E1C700
Length = 1773
Score = 323 (118.8 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 88/311 (28%), Positives = 147/311 (47%)
Query: 5 CIPPFENAAFSAS--VESTNTCGYQNGVPQPTRFCVQSGTHVTAN--TCDY---CYEDTH 57
C P N + + +++TCG Q P +C+ S + TCD ++H
Sbjct: 33 CYPATGNLLVGRARQLSASSTCGLQG----PQEYCIVSHLQDSEKCFTCDSRNPALRESH 88
Query: 58 PVR---YLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESF 114
+ YL + +WWQS +GV+ +V+I L F T++ + F + RP +
Sbjct: 89 RIENVIYLHGPHSERSWWQSE---NGVE---RVSIQLDLEGEFHFTHLIMKFKTFRPAAM 142
Query: 115 AIYKKTYENSSWTPFQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGA 173
+ + SW +++++ +C + + G+ SG + V C YS++ P + G
Sbjct: 143 LVERSADFGRSWKVYRYFAYNCSKLFPGIATHPSGHIGE----VLCEQRYSEIEPSSHGE 198
Query: 174 VPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAI 231
V F L+ Y+ ++QE + T +R+ L +L+T D L LD VL Y+YA+
Sbjct: 199 VIFKVLDPSIPVVD-PYSPDIQELLRVTNLRVNLTKLHTLGDNL-LDSRREVLHKYYYAV 256
Query: 232 ADISVGARCKCNGHASEC---PYVRQS-DGSTRRVCRCEHNTAGPDCNECAPFYNDAPWR 287
++ + C C+GHA+EC P S G C C+H+T G +C C FY++ PWR
Sbjct: 257 DELVMRGSCFCHGHAAECAPAPGAPPSVPGMIHGRCVCKHHTQGLNCERCEDFYHELPWR 316
Query: 288 RASDDA-NECR 297
A + N CR
Sbjct: 317 PAEGSSTNACR 327
>ZFIN|ZDB-GENE-021226-2 [details] [associations]
symbol:lamb4 "laminin, beta 4" species:7955 "Danio
rerio" [GO:0005576 "extracellular region" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] ZFIN:ZDB-GENE-021226-2 GO:GO:0007155 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 HSSP:P02468
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 EMBL:AF468050 IPI:IPI00485935 RefSeq:NP_775383.1
UniGene:Dr.120997 ProteinModelPortal:Q8JHV6 STRING:Q8JHV6
PRIDE:Q8JHV6 GeneID:286831 KEGG:dre:286831 CTD:22798
eggNOG:NOG303831 InParanoid:Q8JHV6 KO:K06245 OrthoDB:EOG41G346
NextBio:20806482 ArrayExpress:Q8JHV6 Uniprot:Q8JHV6
Length = 1827
Score = 314 (115.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 94/319 (29%), Positives = 143/319 (44%)
Query: 3 NRCIPPFENAAF--SASVESTNTCGYQNGVPQPTRFCVQSGTHVTAN--TCDYC--YEDT 56
N C P + +A + +++TCG +P +C+ TCD Y D
Sbjct: 28 NSCYPNLGDLMVGRAAQLAASSTCGLY----RPQNYCILGYLENERKCFTCDSRSPYNDY 83
Query: 57 H-PVRYLTDLSNTT-------TWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS 108
H P + + TT WWQS +GV ++V+I L F +++ L F S
Sbjct: 84 HNPSSHRIENIITTFQPERKMKWWQSE---NGV---HEVSIQLDLEAMFQFSHLILTFKS 137
Query: 109 PRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSP 168
RP S + + +W F++++ C ++ P + G A+ D V C S YS P
Sbjct: 138 FRPASMLVERSKDFGRTWKVFRYFAEDCANSF--PGISEGPAHSIDDLV-CDSRYSGAEP 194
Query: 169 LTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFL--DPSVLRS 226
T G V L+ + Y+ +Q +T T +R+ RL T D L +
Sbjct: 195 STEGEVVLKALDPSFDIHD-PYDSTIQGLITLTNLRVNFTRLLTLGDTLLTRRKRNPQDK 253
Query: 227 YFYAIADISVGARCKCNGHASECPYVRQSDGST-------RRVCRCEHNTAGPDCNECAP 279
Y+YA+ ++ V C CNGHAS+C V + G T C C+HNTAG +C C
Sbjct: 254 YYYALYEMVVRGSCFCNGHASQCIPVDGARGDTFTEPGMVHGRCVCQHNTAGYNCERCQD 313
Query: 280 FYNDAPWRRASD-DANECR 297
FY+DAPWR D++ C+
Sbjct: 314 FYHDAPWRPGGKADSDVCK 332
>FB|FBgn0261800 [details] [associations]
symbol:LanB1 "LanB1" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005604
"basement membrane" evidence=ISS;NAS;IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009888 "tissue development"
evidence=NAS] [GO:0009887 "organ morphogenesis" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016477
"cell migration" evidence=IMP] [GO:0070831 "basement membrane
assembly" evidence=IMP] [GO:0048513 "organ development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
GO:GO:0016477 GO:GO:0008406 EMBL:AE014134 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 EMBL:M95811 EMBL:M19525
EMBL:BT015222 EMBL:AY095001 PIR:A28783 RefSeq:NP_476618.1
RefSeq:NP_723319.1 ProteinModelPortal:P11046 SMR:P11046
IntAct:P11046 MINT:MINT-749338 STRING:P11046 PaxDb:P11046
PRIDE:P11046 EnsemblMetazoa:FBtr0079490 EnsemblMetazoa:FBtr0079491
GeneID:34068 KEGG:dme:Dmel_CG7123 CTD:34068 FlyBase:FBgn0261800
GeneTree:ENSGT00620000087753 InParanoid:P11046 KO:K05636
OMA:DQCAENH OrthoDB:EOG4ZPC92 PhylomeDB:P11046 ChiTaRS:LanB1
GenomeRNAi:34068 NextBio:786713 Bgee:P11046 GermOnline:CG7123
GO:GO:0070831 InterPro:IPR013015 PROSITE:PS51116 Uniprot:P11046
Length = 1788
Score = 311 (114.5 bits), Expect = 3.3e-26, P = 3.3e-26
Identities = 95/319 (29%), Positives = 145/319 (45%)
Query: 5 CIPPFENAAFSAS--VESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYC--YEDT-H-P 58
C P N + +++TCG + P RFC+ S H+ C C E+T H P
Sbjct: 54 CYPATGNLLIGRENRLTASSTCGLHS----PERFCILS--HLQDKKCFLCDTREETKHDP 107
Query: 59 VR--------YLTDL-SNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSP 109
+ Y T +N TWWQS +G + I L F T++ + F +
Sbjct: 108 YKNHRIGQIIYKTKPGTNIPTWWQSE---NGKE---NATIQLDLEAEFHFTHLIITFTTF 161
Query: 110 RPESFAIYKKTYENSSWTPFQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSP 168
RP + I + +W +++++ C+E++ G+P ++ T V CTS YS++ P
Sbjct: 162 RPAAMYIERSFDFGQTWHIYRYFAYDCKESFPGVPT-----VLENITDVMCTSRYSNVEP 216
Query: 169 LTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRS-- 226
G V F L T Y ++Q + T +RI + +L+ D L LD +
Sbjct: 217 SRNGEVIFRVLPPNINV-TDPYAEHVQNQLKMTNLRIQMTKLHKLGDNL-LDSRLENEEK 274
Query: 227 YFYAIADISVGARCKCNGHASEC----PYVRQSDGSTRRV---CRCEHNTAGPDCNECAP 279
Y+Y I+++ V C C GHAS+C P Q+D V C C HNT G +C EC
Sbjct: 275 YYYGISNMVVRGSCSCYGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECED 334
Query: 280 FYNDAPWRRA-SDDANECR 297
F+ND PW+ A N C+
Sbjct: 335 FFNDLPWKPAFGKKTNACK 353
>UNIPROTKB|P55268 [details] [associations]
symbol:LAMB2 "Laminin subunit beta-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0005605 "basal lamina" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11 complex"
evidence=TAS] Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
GO:GO:0007411 GO:GO:0005198 GO:GO:0007528 GO:GO:0007601
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0060041
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0014044
GO:GO:0014002 Orphanet:98915 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005608 GO:GO:0043260
eggNOG:NOG241384 HOGENOM:HOG000007552 InterPro:IPR013015
PROSITE:PS51116 HOVERGEN:HBG052301 EMBL:Z68155 EMBL:Z68156
EMBL:X79683 EMBL:S77512 IPI:IPI00296922 PIR:A55677 PIR:S53869
RefSeq:NP_002283.3 UniGene:Hs.439726 ProteinModelPortal:P55268
SMR:P55268 DIP:DIP-42106N IntAct:P55268 MINT:MINT-1197111
STRING:P55268 PhosphoSite:P55268 DMDM:156630892 PaxDb:P55268
PRIDE:P55268 DNASU:3913 Ensembl:ENST00000305544
Ensembl:ENST00000418109 GeneID:3913 KEGG:hsa:3913 UCSC:uc003cwe.3
CTD:3913 GeneCards:GC03M049133 HGNC:HGNC:6487 HPA:CAB000053
HPA:HPA001895 MIM:150325 MIM:609049 MIM:614199 neXtProt:NX_P55268
Orphanet:2670 PharmGKB:PA164741827 InParanoid:P55268 KO:K06243
OMA:QPYCIVS OrthoDB:EOG4KSPHW PhylomeDB:P55268 ChiTaRS:LAMB2
GenomeRNAi:3913 NextBio:15371 ArrayExpress:P55268 Bgee:P55268
CleanEx:HS_LAMB2 Genevestigator:P55268 GermOnline:ENSG00000172037
GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 Uniprot:P55268
Length = 1798
Score = 310 (114.2 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 90/298 (30%), Positives = 140/298 (46%)
Query: 20 STNTCGYQNGVPQPTRFCVQSGTHVTANT--CD----YCYED---THPVR-YLTDLS--N 67
+++TCG NG PQP +C+ S CD + D +H ++ +T +
Sbjct: 64 ASSTCGL-NG-PQP--YCIVSHLQDEKKCFLCDSRRPFSARDNPHSHRIQNVVTSFAPQR 119
Query: 68 TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWT 127
WWQS +G+ P V I L F T++ + F + RP + + + +W
Sbjct: 120 RAAWWQSE---NGI--P-AVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWH 173
Query: 128 PFQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAK 186
++++S C + G+P +D V C S YS++ P T G V + L+
Sbjct: 174 VYRYFSYDCGADFPGVPLAPPRHWDD----VVCESRYSEIEPSTEGEVIYRVLDPAIPIP 229
Query: 187 TFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNG 244
Y+ +Q + T +R+ L RL+T D L LDP + Y+YA+ ++ V C C G
Sbjct: 230 D-PYSSRIQNLLKITNLRVNLTRLHTLGDNL-LDPRREIREKYYYALYELVVRGNCFCYG 287
Query: 245 HASEC---PYV-RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDD-ANECR 297
HASEC P ++G C C+HNT G +C +C FY D PWR A D ++ CR
Sbjct: 288 HASECAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYRDLPWRPAEDGHSHACR 345
>RGD|2988 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005178 "integrin binding" evidence=ISO]
[GO:0005604 "basement membrane" evidence=IEA;ISO] [GO:0005605 "basal
lamina" evidence=ISO] [GO:0005608 "laminin-3 complex" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0007528 "neuromuscular junction development"
evidence=ISO] [GO:0007601 "visual perception" evidence=ISO]
[GO:0014002 "astrocyte development" evidence=ISO] [GO:0014044
"Schwann cell development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043256 "laminin complex"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO] [GO:0048677 "axon
extension involved in regeneration" evidence=ISO] [GO:0050808
"synapse organization" evidence=ISO] [GO:0060041 "retina development
in camera-type eye" evidence=ISO] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=ISO] [GO:0072274
"metanephric glomerular basement membrane development" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] RGD:2988
GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
CTD:3913 KO:K06243 EMBL:X16563 IPI:IPI00212868 PIR:S03539
RefSeq:NP_037106.1 UniGene:Rn.774 ProteinModelPortal:P15800
PhosphoSite:P15800 PRIDE:P15800 GeneID:25473 KEGG:rno:25473
NextBio:606781 Genevestigator:P15800 Uniprot:P15800
Length = 1801
Score = 308 (113.5 bits), Expect = 7.0e-26, P = 7.0e-26
Identities = 87/298 (29%), Positives = 139/298 (46%)
Query: 20 STNTCGYQNGVPQPTRFCVQSGTHVTANT--CD----YCYED---THPVR-YLTDLS--N 67
+++TCG + PQP +C+ S CD + D +H ++ +T +
Sbjct: 67 ASSTCGLHS--PQP--YCIVSHLQDEKKCFLCDSRRPFSARDNPNSHRIQNVVTSFAPQR 122
Query: 68 TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWT 127
T WWQS +GV P V I L F T++ + F + RP + + + +W
Sbjct: 123 RTAWWQSE---NGV--P-MVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWR 176
Query: 128 PFQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAK 186
++++S C + G+P + +D V C S YS++ P T G V + L+
Sbjct: 177 VYRYFSYDCGADFPGIPLAPPRRWDD----VVCESRYSEIEPSTEGEVIYRVLDPAIPIP 232
Query: 187 TFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNG 244
Y+ +Q + T +R+ L RL+T D L LDP + Y+YA+ ++ + C C G
Sbjct: 233 D-PYSSRIQNLLKITNLRVNLTRLHTLGDNL-LDPRREIREKYYYALYELVIRGNCFCYG 290
Query: 245 HASEC---PYV-RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDD-ANECR 297
HAS+C P ++G C C+HNT G +C +C FY D PW A D + CR
Sbjct: 291 HASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQDLPWHPAEDGHTHACR 348
>MGI|MGI:99916 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005178 "integrin binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005608 "laminin-3 complex" evidence=ISO;IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IGI] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0014044 "Schwann cell development" evidence=IDA] [GO:0031175
"neuron projection development" evidence=IDA] [GO:0043256 "laminin
complex" evidence=IDA] [GO:0045202 "synapse" evidence=IDA]
[GO:0048677 "axon extension involved in regeneration" evidence=IMP]
[GO:0050808 "synapse organization" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0072249
"metanephric glomerular visceral epithelial cell development"
evidence=IMP] [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IMP] MGI:MGI:99916 GO:GO:0007411
GO:GO:0007528 GO:GO:0007601 GO:GO:0007155 GO:GO:0045202
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
EMBL:CH466560 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
eggNOG:NOG241384 HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301 CTD:3913
KO:K06243 OMA:QPYCIVS OrthoDB:EOG4KSPHW ChiTaRS:LAMB2 GO:GO:0048677
GO:GO:0072274 GO:GO:0072249 EMBL:U43541 EMBL:U42624 EMBL:BC026051
EMBL:X75928 IPI:IPI00119065 PIR:I48749 RefSeq:NP_032509.2
UniGene:Mm.425599 ProteinModelPortal:Q61292 SMR:Q61292
STRING:Q61292 PhosphoSite:Q61292 PaxDb:Q61292 PRIDE:Q61292
Ensembl:ENSMUST00000065014 GeneID:16779 KEGG:mmu:16779
InParanoid:Q8R0Y0 NextBio:290628 Bgee:Q61292 CleanEx:MM_LAMB2
Genevestigator:Q61292 GermOnline:ENSMUSG00000052911 Uniprot:Q61292
Length = 1799
Score = 307 (113.1 bits), Expect = 9.0e-26, P = 9.0e-26
Identities = 87/298 (29%), Positives = 139/298 (46%)
Query: 20 STNTCGYQNGVPQPTRFCVQSGTHVTANT--CD----YCYED---THPVR-YLTDLS--N 67
+++TCG + PQP +C+ S CD + D +H ++ +T +
Sbjct: 67 ASSTCGLHS--PQP--YCIVSHLQDEKKCFLCDSRRPFSARDNPNSHRIQNVVTSFAPQR 122
Query: 68 TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWT 127
T WWQS +GV P V I L F T++ + F + RP + + + +W
Sbjct: 123 RTAWWQSE---NGV--P-MVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWH 176
Query: 128 PFQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAK 186
++++S C + G+P + +D V C S YS++ P T G V + L+
Sbjct: 177 VYRYFSYDCGADFPGIPLAPPRRWDD----VVCESRYSEIEPSTEGEVIYRVLDPAIPIP 232
Query: 187 TFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNG 244
Y+ +Q + T +R+ L RL+T D L LDP + Y+YA+ ++ + C C G
Sbjct: 233 D-PYSSRIQNLLKITNLRVNLTRLHTLGDNL-LDPRREIREKYYYALYELVIRGNCFCYG 290
Query: 245 HASEC---PYV-RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDD-ANECR 297
HAS+C P ++G C C+HNT G +C +C FY D PW A D + CR
Sbjct: 291 HASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQDLPWHPAEDGHTHACR 348
>UNIPROTKB|F1NJ23 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:NTWQLAS EMBL:AADN02036854 EMBL:AADN02036852 EMBL:AADN02036853
IPI:IPI00586930 Ensembl:ENSGALT00000012832 ArrayExpress:F1NJ23
Uniprot:F1NJ23
Length = 1782
Score = 306 (112.8 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 89/309 (28%), Positives = 148/309 (47%)
Query: 15 SASVESTNTCGYQNGVPQPTRFCVQSGTHVTANT-CDYC-----YEDT-HPVRYLTDLSN 67
+A + +++TCG + P+P +C+ S H+ + C C + DT +P + +
Sbjct: 39 AARLSASSTCGLRQ--PEP--YCIVS--HLQEDKKCFICDSEDPFHDTLNPDSHRIENVV 92
Query: 68 TT-------TWWQSTTMYDGVQ-WPNQVNI--TLKF--GKTFDVTYVRLLFWSPRPESFA 115
TT WWQS + + + N++ T KF KTF RP +
Sbjct: 93 TTFAPNRLKLWWQSENAFQIIHVFCNRLGSIHTEKFLAHKTF------------RPAAML 140
Query: 116 IYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVP 175
I + + +W +++++ C+ ++ P ++G D + C S YSD+ P T G V
Sbjct: 141 IERSSDFGKTWQVYRYFAYDCESSF--PGISTGPMKKVDD-IICDSRYSDIEPSTEGEVI 197
Query: 176 FATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIAD 233
+ L+ +R + Y+ +Q + T +R+ +L+T D L LD + Y+YAI D
Sbjct: 198 YRVLDPAFRIED-PYSPRIQNLLKITNLRVKFTKLHTLGDNL-LDSRMEIREKYYYAIYD 255
Query: 234 ISVGARCKCNGHASEC-P---YVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRA 289
+ V C C GHASEC P + + +G C C HNT G +C +C FY+D PWR A
Sbjct: 256 MVVRGNCFCYGHASECAPVEGFSEEVEGMVHGHCMCRHNTKGLNCEQCLDFYHDLPWRPA 315
Query: 290 SD-DANECR 297
++N C+
Sbjct: 316 EGRNSNACK 324
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 239 RCKCNGHASECPY---VRQSDGSTRR-VCR-CEHNTAGPDCNECAPFYNDAPWRRASD 291
+C CNGH+++C + V + G+T VC C+HNT G +C +C PFY P R D
Sbjct: 325 KCNCNGHSTQCHFDMAVYMATGNTSGGVCDDCQHNTVGRNCEQCKPFYFQHPERDLRD 382
>UNIPROTKB|O75445 [details] [associations]
symbol:USH2A "Usherin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0050953 "sensory perception of light stimulus"
evidence=IMP] [GO:0005518 "collagen binding" evidence=IDA]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0048496
"maintenance of organ identity" evidence=IMP] [GO:0045494
"photoreceptor cell maintenance" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0035315 "hair cell differentiation" evidence=ISS]
[GO:0060113 "inner ear receptor cell differentiation" evidence=ISS]
[GO:0017022 "myosin binding" evidence=ISS] [GO:0002142 "stereocilia
ankle link complex" evidence=ISS] [GO:0016324 "apical plasma
membrane" evidence=ISS] [GO:0032421 "stereocilium bundle"
evidence=ISS] [GO:0060171 "stereocilium membrane" evidence=ISS]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 Orphanet:791 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 GO:GO:0017022 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113
Pfam:PF02210 GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 EMBL:AL445650 Orphanet:231178
GO:GO:0002142 GO:GO:0048496 EMBL:AC092799 GO:GO:0060171
InterPro:IPR006558 SMART:SM00560 EMBL:AF055580 EMBL:AF091889
EMBL:AF091873 EMBL:AF091875 EMBL:AF091876 EMBL:AF091874
EMBL:AF091877 EMBL:AF091879 EMBL:AF091881 EMBL:AF091883
EMBL:AF091888 EMBL:AF091887 EMBL:AF091886 EMBL:AF091885
EMBL:AF091884 EMBL:AF091882 EMBL:AF091880 EMBL:AF091878
EMBL:AY481573 EMBL:AC138024 EMBL:AL358858 EMBL:AC093581
EMBL:AC119429 EMBL:AL139259 EMBL:AL358452 EMBL:AL513305
IPI:IPI00289540 IPI:IPI00410150 IPI:IPI00741527 RefSeq:NP_009054.5
RefSeq:NP_996816.2 UniGene:Hs.655974 ProteinModelPortal:O75445
STRING:O75445 PhosphoSite:O75445 PaxDb:O75445 PRIDE:O75445
Ensembl:ENST00000307340 Ensembl:ENST00000366942
Ensembl:ENST00000366943 GeneID:7399 KEGG:hsa:7399 UCSC:uc001hku.1
UCSC:uc001hkv.3 CTD:7399 GeneCards:GC01M215796 H-InvDB:HIX0028527
HGNC:HGNC:12601 MIM:276901 MIM:608400 MIM:613809 neXtProt:NX_O75445
PharmGKB:PA37228 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 GenomeRNAi:7399
NextBio:28962 Bgee:O75445 CleanEx:HS_USH2A Genevestigator:O75445
GermOnline:ENSG00000042781 InterPro:IPR026915
PANTHER:PTHR10574:SF53 Uniprot:O75445
Length = 5202
Score = 288 (106.4 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 81/268 (30%), Positives = 135/268 (50%)
Query: 31 PQPTRFCVQSGTHVTA-NTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQ--- 86
P R+C+ + TA N + HP+ ++ D T+W + ++ + NQ
Sbjct: 313 PLAQRYCIPNDAGDTADNRVSRLNPEAHPLSFVNDNDVGTSW--VSNVFTNITQLNQGVT 370
Query: 87 VNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDN 146
+++ L+ G+ + V Y+ + F+SP+P I +K + W +Q+++ +C +G+ N
Sbjct: 371 ISVDLENGQ-YQVFYIIIQFFSPQPTEIRIQRKKENSLDWEDWQYFARNCG-AFGMK--N 426
Query: 147 SGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLE-G-RYRA--KTFSYNL-NLQEFVTAT 201
+G D+ V C + S+ +P + G V F+ L G YR F YN +LQEFV AT
Sbjct: 427 NGDLEKPDS-VNCL-QLSNFTPYSRGNVTFSILTPGPNYRPGYNNF-YNTPSLQEFVKAT 483
Query: 202 EIRITLDRLNTFYDELFLDPSV-LRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTR 260
+IR +Y + +V LR +YA+ +I++ RC+C+GHA C Q R
Sbjct: 484 QIRFHFH--GQYYTT---ETAVNLRHRYYAVDEITISGRCQCHGHADNCDTTSQP---YR 535
Query: 261 RVCRCEHNTAGPDCNECAPFYNDAPWRR 288
+C E T G C+ C P YND P+R+
Sbjct: 536 CLCSQESFTEGLHCDRCLPLYNDKPFRQ 563
Score = 58 (25.5 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 263 CRCEHNTAGPDCNECAP-FYN 282
C C+ + +G CN+C FYN
Sbjct: 662 CNCKRHVSGRQCNQCQNGFYN 682
Score = 50 (22.7 bits), Expect = 8.6e-25, Sum P(2) = 8.6e-25
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 263 CRCEHNTAGPDCNECAPF-YN 282
C C+ G CN+C P YN
Sbjct: 868 CPCKLGVTGLRCNQCEPHRYN 888
>UNIPROTKB|Q13751 [details] [associations]
symbol:LAMB3 "Laminin subunit beta-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 EMBL:CH471100 GO:GO:0005198
GO:GO:0050873 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_111155 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
GO:GO:0031581 MIM:226650 Orphanet:79402 EMBL:AL031316
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AL023754 MIM:226700 Orphanet:79404 GO:GO:0005610 EMBL:L25541
EMBL:U17760 EMBL:U17745 EMBL:U17746 EMBL:U17747 EMBL:U17748
EMBL:U17749 EMBL:U17750 EMBL:U17751 EMBL:U17752 EMBL:U17753
EMBL:U17754 EMBL:U17755 EMBL:U17756 EMBL:U17757 EMBL:U17758
EMBL:U17759 EMBL:D37766 EMBL:AY035783 EMBL:BC075838 IPI:IPI00299404
PIR:A53612 RefSeq:NP_000219.2 RefSeq:NP_001017402.1
RefSeq:NP_001121113.1 UniGene:Hs.497636 ProteinModelPortal:Q13751
SMR:Q13751 MINT:MINT-4053402 STRING:Q13751 PhosphoSite:Q13751
DMDM:2497600 PaxDb:Q13751 PRIDE:Q13751 DNASU:3914
Ensembl:ENST00000356082 Ensembl:ENST00000367030
Ensembl:ENST00000391911 Ensembl:ENST00000455193 GeneID:3914
KEGG:hsa:3914 UCSC:uc001hhg.3 CTD:3914 GeneCards:GC01M209788
HGNC:HGNC:6490 HPA:HPA008069 MIM:150310 neXtProt:NX_Q13751
PharmGKB:PA30278 eggNOG:NOG289025 HOGENOM:HOG000113279
HOVERGEN:HBG052302 InParanoid:Q13751 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z PhylomeDB:Q13751 ChiTaRS:LAMB3 GenomeRNAi:3914
NextBio:15375 PMAP-CutDB:Q13751 ArrayExpress:Q13751 Bgee:Q13751
CleanEx:HS_LAMB3 Genevestigator:Q13751 GermOnline:ENSG00000196878
Uniprot:Q13751
Length = 1172
Score = 300 (110.7 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 90/309 (29%), Positives = 136/309 (44%)
Query: 5 CIPPFENAAFSAS--VESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCD----YCYEDTH 57
C PP + + + +++TCG + +P +C Q G + CD + Y +H
Sbjct: 26 CYPPVGDLLVGRTRFLRASSTCG----LTKPETYCTQYGEWQMKCCKCDSRQPHNYY-SH 80
Query: 58 PVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
V + S WWQS D N V++ L + F + V + F P P I
Sbjct: 81 RVENVASSSGPMRWWQSQN--D----VNPVSLQLDLDRRFQLQEVMMEFQGPMPAGMLIE 134
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKAND-SDTRVFCTS-EYSDLSPLTGGAVP 175
+ + +W +Q+ +A C T+ P G+ D R C S + L GG V
Sbjct: 135 RSSDFGKTWRVYQYLAADCTSTF--PRVRQGRPQSWQDVR--CQSLPQRPNARLNGGKVQ 190
Query: 176 FATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADIS 235
++ + + +QE T +R+ RL + PS +YA++ +
Sbjct: 191 LNLMD-LVSGIPATQSQKIQEVGEITNLRVNFTRLAPVPQRGYHPPSA----YYAVSQLR 245
Query: 236 VGARCKCNGHASEC-PYVRQSDG-ST----RRVCRCEHNTAGPDCNECAPFYNDAPWRRA 289
+ C C+GHA C P S G ST VC C+HNTAGP+C CAPFYN+ PWR A
Sbjct: 246 LQGSCFCHGHADRCAPKPGASAGPSTAVQVHDVCVCQHNTAGPNCERCAPFYNNRPWRPA 305
Query: 290 S-DDANECR 297
DA+EC+
Sbjct: 306 EGQDAHECQ 314
>UNIPROTKB|E2R4J1 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072274 "metanephric glomerular basement
membrane development" evidence=IEA] [GO:0072249 "metanephric
glomerular visceral epithelial cell development" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
[GO:0048677 "axon extension involved in regeneration" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0014044 "Schwann cell
development" evidence=IEA] [GO:0014002 "astrocyte development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005608 "laminin-3
complex" evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:AAEX03012231 ProteinModelPortal:E2R4J1
Ensembl:ENSCAFT00000018765 Uniprot:E2R4J1
Length = 1803
Score = 301 (111.0 bits), Expect = 3.9e-25, P = 3.9e-25
Identities = 87/298 (29%), Positives = 139/298 (46%)
Query: 20 STNTCGYQNGVPQPTRFCVQSGTHVTANT--CD----YCYED---THPVR-YLTDLS--N 67
+++TCG PQP +C+ S CD + D +H ++ +T +
Sbjct: 67 ASSTCGLHG--PQP--YCIVSHLQDEKKCFLCDSRRPFSARDNPNSHRIQNVVTSFAPQR 122
Query: 68 TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWT 127
WWQS +GV P V I L F T++ + F + RP + + + +W
Sbjct: 123 RAAWWQSE---NGV--P-VVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWH 176
Query: 128 PFQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAK 186
++++S C + G+P +D + C S YS++ P T G V + L+
Sbjct: 177 VYRYFSYDCGADFPGVPLAPPRHWDD----IVCESRYSEIEPSTEGEVIYRVLDPAIPIP 232
Query: 187 TFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNG 244
Y+ +Q + T +R+ L RL+T D L LDP + Y+YA+ ++ V C C G
Sbjct: 233 D-PYSPRIQNLLKITNLRVNLTRLHTLGDNL-LDPRREIREKYYYALYELVVRGNCFCYG 290
Query: 245 HASEC---PYV-RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDD-ANECR 297
HAS+C P ++G C C+HNT G +C +C FY+D PWR A D ++ CR
Sbjct: 291 HASQCAPAPGAPAHAEGMVHGACVCKHNTRGLNCEQCQDFYHDLPWRPAEDGHSHACR 348
>UNIPROTKB|F1N805 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
EMBL:AADN02014130 EMBL:AADN02014129 IPI:IPI00818986
ProteinModelPortal:F1N805 Ensembl:ENSGALT00000036243
ArrayExpress:F1N805 Uniprot:F1N805
Length = 560
Score = 186 (70.5 bits), Expect = 5.9e-25, Sum P(2) = 5.9e-25
Identities = 54/179 (30%), Positives = 83/179 (46%)
Query: 5 CIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDY--CY-------ED 55
C PP N A + + TCG QN + QS H ++ C C ++
Sbjct: 6 CNPPVGNLATGRTPITLTTCG-QNSTELYCSYPDQSLLHPASHGCGQPRCTKCNANQPDN 64
Query: 56 THPVRYLTD--LSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPES 113
+H +TD +N +WWQS GV ++ I L F F +T+V +F SPRP +
Sbjct: 65 SHLPADMTDDFFANPVSWWQSA---QGV---HREEIRLDFETEFYLTHVIAVFKSPRPAA 118
Query: 114 FAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
+ + +W P++++S +C T+GL DD + + + CTS YSD P T G
Sbjct: 119 MVLERSQDYGQTWRPYKYFSVNCTATFGLQDDLTEEGS------MCTSRYSDAVPCTRG 171
Score = 162 (62.1 bits), Expect = 5.9e-25, Sum P(2) = 5.9e-25
Identities = 34/80 (42%), Positives = 40/80 (50%)
Query: 229 YAIADISVGARCKCNGHASECPYV-RQSDGSTRRV-------CRCEHNTAGPDCNECAPF 280
YAI D+ + C CNGHA EC R + S V C C HNTAG C +CAP
Sbjct: 196 YAIYDLIIRGSCFCNGHAEECELANRTAYNSASYVKHQVHGKCVCRHNTAGDHCEKCAPL 255
Query: 281 YNDAPWRRASDDA---NECR 297
YND PW+ NEC+
Sbjct: 256 YNDQPWKPGDGKTGAPNECK 275
Score = 91 (37.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 239 RCKCNGHASECPY---VRQSDGS-TRRVC-RCEHNTAGPDCNECAP-FYND 283
+C+C+ HA C + V + G + VC C+HNT G C C P +Y D
Sbjct: 276 KCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRD 326
Score = 53 (23.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 263 CRCEHNTAGPDCNECAPFY 281
C C+ AGP+C+ C Y
Sbjct: 365 CYCKPGVAGPNCDRCLMGY 383
>UNIPROTKB|E1BDK6 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:DAAA02054428 IPI:IPI00904771 UniGene:Bt.7183
Ensembl:ENSBTAT00000057452 NextBio:20873039 ArrayExpress:E1BDK6
Uniprot:E1BDK6
Length = 1802
Score = 299 (110.3 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 86/298 (28%), Positives = 139/298 (46%)
Query: 20 STNTCGYQNGVPQPTRFCVQSGTHVTANT--CD----YCYED---THPVR-YLTDLS--N 67
+++TCG + PQP +C+ S CD + D +H ++ +T +
Sbjct: 68 ASSTCGLRG--PQP--YCIVSHLQDEKKCFLCDSRRPFSARDNPNSHRIQNVVTSFAPQR 123
Query: 68 TTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWT 127
WWQS +GV P V I L F T++ + F + RP + + + +W
Sbjct: 124 RAAWWQSE---NGV--P-MVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWR 177
Query: 128 PFQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAK 186
++++S C + G+P +D V C S YS++ P T G V + L+
Sbjct: 178 VYRYFSYDCAADFPGVPLAPPRHWDD----VVCESRYSEIEPSTEGEVIYRVLDPAIPIP 233
Query: 187 TFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYFYAIADISVGARCKCNG 244
Y+ +Q + T +R+ L RL+T D L LDP + Y+YA+ ++ V C C G
Sbjct: 234 D-PYSPRIQNLLKITNLRVNLTRLHTLGDNL-LDPRREIREKYYYALYELVVRGNCFCYG 291
Query: 245 HASEC---PYV-RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
HAS+C P ++G C C+HNT G +C +C FY+D PW A D ++ C+
Sbjct: 292 HASQCAPAPGAPAHAEGMVHGACVCKHNTRGLNCEQCQDFYHDLPWHPAEDRHSHACK 349
>UNIPROTKB|F1SPT5 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 EMBL:CU856115
Ensembl:ENSSSCT00000012455 ArrayExpress:F1SPT5 Uniprot:F1SPT5
Length = 1642
Score = 295 (108.9 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 89/314 (28%), Positives = 143/314 (45%)
Query: 5 CIPPFENAAFSAS-VESTNTCGYQNGVPQPTRFCVQSGTHVTANT--CD----YCYED-- 55
C P + A + +++TCG PQP +C+ S CD + D
Sbjct: 50 CYPATDLLVGRADRLTASSTCGLHG--PQP--YCIVSHLQDEKKCFLCDSRRPFSARDNP 105
Query: 56 -THPVR-YLTDLS--NTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRP 111
+H ++ +T + WWQS +GV P V I L F T++ + F + RP
Sbjct: 106 NSHRIQNVVTSFAPQRRAAWWQSE---NGV--P-VVTIQLDLEAEFHFTHLIMTFKTFRP 159
Query: 112 ESFAIYKKTYENSSWTPFQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSEYSDLSPLT 170
+ + + +W ++++S C + G+P +D V C S YS++ P T
Sbjct: 160 AAMLVERSADFGRTWHVYRYFSYDCGADFPGVPLAPPRHWDD----VVCESRYSEIEPST 215
Query: 171 GGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP--SVLRSYF 228
G V + L+ Y+ +Q + T +R+ L RL+T D L LDP + Y+
Sbjct: 216 EGEVIYRVLDPAIPIPD-PYSPRIQNLLKITNLRVNLTRLHTLGDNL-LDPRREIREKYY 273
Query: 229 YAIADISVGARCKCNGHASEC---PYV-RQSDGSTRRVCRCEHNTAGPDCNECAPFYNDA 284
YA+ ++ V C C GHAS+C P ++G C C+HNT G +C +C FY+D
Sbjct: 274 YALYELVVRGNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYHDL 333
Query: 285 PWRRASDD-ANECR 297
PW A D ++ C+
Sbjct: 334 PWHPAEDGHSHACK 347
>UNIPROTKB|F1PFM5 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050873 "brown fat cell differentiation"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005610 GeneTree:ENSGT00620000087753 OMA:RSQMEED
EMBL:AAEX03005067 EMBL:AAEX03005068 Ensembl:ENSCAFT00000018923
Uniprot:F1PFM5
Length = 1171
Score = 293 (108.2 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 83/308 (26%), Positives = 135/308 (43%)
Query: 5 CIPPFENAAFSAS--VESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCD----YCYEDTH 57
C PP + + + +++TCG + +P +C Q G + CD + Y ++H
Sbjct: 26 CYPPVGDLLIGRTRFLRASSTCG----LTKPETYCTQYGEWQMKCCKCDSRLPHSY-NSH 80
Query: 58 PVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
V + S WWQS D N V++ L + F + + + F P P I
Sbjct: 81 RVENVVSSSGPMRWWQSQN--D----VNPVSLQLDLDRRFQLQDILMDFKGPMPAGMLIE 134
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKAND-SDTRVFCTSEYSDLSPLTGGAVPF 176
+ + ++W +Q+ +A C + P G+ D R + + P GG V
Sbjct: 135 RSSDFGNTWQVYQYLAADCASAF--PRVRQGQPQSWQDVRCQSLPQRPNGRP-EGGKVQL 191
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISV 236
++ + + ++E T +R+ RL + PS +YA++ + +
Sbjct: 192 HIMDLASGIPA-TQSQKIRELGEITNLRVNFTRLAPVPQRGYHPPSA----YYAVSQLRL 246
Query: 237 GARCKCNGHASEC---PYVRQSDGST---RRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
RC C+GHA C P +T VC C+HNTAGP+C CAPFYN+ PWR A
Sbjct: 247 QGRCLCHGHADRCAPQPGAPAGPSTTVQVHDVCVCQHNTAGPNCERCAPFYNNQPWRPAD 306
Query: 291 D-DANECR 297
D D +EC+
Sbjct: 307 DQDPHECQ 314
>ZFIN|ZDB-GENE-060503-794 [details] [associations]
symbol:ush2a "Usher syndrome 2A (autosomal
recessive, mild)" species:7955 "Danio rerio" [GO:0042462 "eye
photoreceptor cell development" evidence=IGI] InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-060503-794
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0042462 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AL845481 EMBL:CT027582 EMBL:AL928842
EMBL:AL929128 IPI:IPI00882773 UniGene:Dr.118940 UniGene:Dr.158626
Ensembl:ENSDART00000086201 InParanoid:Q1MTD2 Uniprot:Q1MTD2
Length = 5236
Score = 300 (110.7 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 87/277 (31%), Positives = 136/277 (49%)
Query: 31 PQPTRFCVQSGTH-VTANTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQ--- 86
P R+C+ + + T N +D HP+ Y+ D TTW S ++ ++ ++
Sbjct: 325 PLVERYCIPNAANDTTHNKVLRLNQDAHPLDYINDNDIGTTWISS--IFPSIELLDKGIT 382
Query: 87 VNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDN 146
+ I L+ G+ + V YV L F + +PE+ I +KT +S W +QF + +C +G+ +DN
Sbjct: 383 ITIDLENGQ-YQVFYVILQFLNAQPEAVRIQRKTVGSSEWKDWQFLAKNCSY-FGM-EDN 439
Query: 147 SGKANDSDTRVFCTSEYSDLSPLTGGAVPFATL--EGRYRA--KTFSYNLNLQEFVTATE 202
A D V C SD+ P + G + F+ L E R F + LQEFV AT
Sbjct: 440 G--ALDRPDSVNCLQLPSDI-PYSRGNITFSMLTPEPNLRPGYNDFYNSAALQEFVRATH 496
Query: 203 IRITLDRLNTFYDELFLDPSV-LRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRR 261
+RI L ++ + D +V R +YA+ +I++ RC+C+GHA C S R
Sbjct: 497 VRIQLH--GQYHTQ---DATVPFRHRYYAVDEITISGRCECHGHADSCD---TSVSPYRC 548
Query: 262 VCRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
C E +T G +C C P +ND P+R A CR
Sbjct: 549 ACLPESHTHGANCERCIPLFNDKPFRPGDQIQAFNCR 585
>UNIPROTKB|F1NZ77 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002142 "stereocilia ankle link complex" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0016324
"apical plasma membrane" evidence=IEA] [GO:0017022 "myosin binding"
evidence=IEA] [GO:0035315 "hair cell differentiation" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0060171 "stereocilium membrane" evidence=IEA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016324
SUPFAM:SSF49265 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
Pfam:PF02210 GO:GO:0032421 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0002142
GeneTree:ENSGT00700000104042 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AADN02012097 EMBL:AADN02012098
EMBL:AADN02012099 EMBL:AADN02012100 EMBL:AADN02012101
EMBL:AADN02012102 EMBL:AADN02012103 IPI:IPI00599063
Ensembl:ENSGALT00000015728 ArrayExpress:F1NZ77 Uniprot:F1NZ77
Length = 5217
Score = 299 (110.3 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 83/275 (30%), Positives = 136/275 (49%)
Query: 31 PQPTRFCVQSGTHVTANTCDYCYE-DTHPVRYLTDLSNTTTWWQST-TMYDGVQWPNQVN 88
P R+C+ +G T N + + HP+ Y+ D TTW S G+ +
Sbjct: 312 PLIQRYCIPNGADDTTNDRVLRLDAEAHPLYYINDDDIGTTWISSVFANAAGLDHGVSIT 371
Query: 89 ITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSG 148
I L+ G+ + V Y+ L F+SP PE+ I +K ++ +W +Q+++ +C +G+ DN+G
Sbjct: 372 IDLQNGQ-YQVFYIILQFFSPHPEAIRIERKKRDDLNWEDWQYFAKNCS-IFGM--DNNG 427
Query: 149 KANDSDTRVFCTSEYSDLSPLTGGAVPFATL--EGRYRA--KTFSYNL-NLQEFVTATEI 203
D+ V C + +P + G + F+ L E +R F YN +LQEFV AT++
Sbjct: 428 SLEKPDS-VNCL-QLPSFTPYSYGNLTFSVLTPEPNHRPGYNDF-YNTPSLQEFVKATQV 484
Query: 204 RITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVC 263
RI + R +E +++ R +Y + +++V RC C+GHA C + R +C
Sbjct: 485 RIHM-RGQYHTNESWVN---FRHRYYGVNEVTVSGRCNCHGHADNCDTAMEP---YRCLC 537
Query: 264 RCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
E T G C+ C P YND P+R A C+
Sbjct: 538 IKESYTEGIQCDRCLPLYNDKPFRPGDQVHAYNCK 572
>RGD|628777 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10116 "Rattus norvegicus" [GO:0002142 "stereocilia ankle
link complex" evidence=ISO] [GO:0005518 "collagen binding"
evidence=ISO] [GO:0005578 "proteinaceous extracellular matrix"
evidence=NAS] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA;ISO] [GO:0016324 "apical plasma membrane"
evidence=ISO] [GO:0017022 "myosin binding" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=ISO] [GO:0045494
"photoreceptor cell maintenance" evidence=ISO] [GO:0048496
"maintenance of organ identity" evidence=ISO] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0050953 "sensory perception of light
stimulus" evidence=ISO] [GO:0060113 "inner ear receptor cell
differentiation" evidence=ISO] [GO:0060171 "stereocilium membrane"
evidence=ISO] [GO:0001917 "photoreceptor inner segment"
evidence=IDA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
RGD:628777 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007601
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0050896 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007605 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:7399
eggNOG:NOG245744 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AY077844 IPI:IPI00202312 RefSeq:NP_001231686.1
RefSeq:NP_742045.2 UniGene:Rn.200477 ProteinModelPortal:Q8K3K1
STRING:Q8K3K1 PhosphoSite:Q8K3K1 PRIDE:Q8K3K1 GeneID:289369
KEGG:rno:289369 UCSC:RGD:628777 NextBio:629723
Genevestigator:Q8K3K1 Uniprot:Q8K3K1
Length = 1512
Score = 288 (106.4 bits), Expect = 7.5e-24, P = 7.5e-24
Identities = 81/276 (29%), Positives = 137/276 (49%)
Query: 31 PQPTRFCVQSGTHVTA-NTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQ--- 86
P ++C+ +G T + + HP+ ++ D + T W S D Q NQ
Sbjct: 309 PSVQQYCIPNGVEDTLQHRVSRLNPEAHPLSFIND-DDVATSWISHVFTDITQL-NQGVA 366
Query: 87 VNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDN 146
++I L+ G+ + V + + F SP+P + I +K + S W +Q+++ +C +G+ N
Sbjct: 367 ISIDLENGQ-YQVFQITIRFSSPQPVAMRIQRKKADKSLWEDWQYFARNCS-VWGMK--N 422
Query: 147 SGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEG--RYRAKTFS-YNLNL-QEFVTATE 202
+G + ++ V C ++ + P + G V F L ++R + YN +L QEF+TAT+
Sbjct: 423 NGDLENPNS-VNCL-QFPEFIPFSHGNVTFDLLTSGQKHRPGDYDFYNSSLLQEFMTATQ 480
Query: 203 IRITLDRLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRV 262
IR+ L FY S R +YA+ +I++ RC+C+GHA C R+ R +
Sbjct: 481 IRLYFRGL--FYPAWHTVDS--RHRYYAVDEITIIGRCQCHGHAETCDRTRRP---YRCL 533
Query: 263 CRCEHNTAGPDCNECAPFYNDAPWRRASD-DANECR 297
C T GP C C+P YND P+R + A C+
Sbjct: 534 CSPHSFTEGPQCGRCSPLYNDKPFRSGNKVHAFNCK 569
>ZFIN|ZDB-GENE-050310-1 [details] [associations]
symbol:ntn4 "netrin 4" species:7955 "Danio rerio"
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-1 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG082019 EMBL:BC163582 IPI:IPI00864479
UniGene:Dr.84045 ProteinModelPortal:B3DJR9 HOGENOM:HOG000168430
Uniprot:B3DJR9
Length = 593
Score = 267 (99.0 bits), Expect = 7.7e-24, Sum P(2) = 7.7e-24
Identities = 87/313 (27%), Positives = 136/313 (43%)
Query: 3 NR-CIPPFENAAFSASVESTNTCGYQNGVPQPTRFCVQSGTHVTANTCDYC----YEDTH 57
NR C P N A +++ + CG + P +FC+ + C+ C + H
Sbjct: 30 NRVCNPRMGNLAVGRPIQTISQCGSTS----PEQFCMYRPDSCVLD-CEICDALVSQHAH 84
Query: 58 PVRYLTD--LSNTTTWWQST--TMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPES 113
+TD TWWQS T + +Q +V F T++ ++F SPRP
Sbjct: 85 SPSSMTDSPFKQPLTWWQSAPGTAIETLQLDLEVE--------FYFTHLIIIFMSPRPAV 136
Query: 114 FAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGA 173
AI + +W+ +S +C E L D G+ CT++YS P T G
Sbjct: 137 MAIDRSRDFGQTWSLLMLFSHNCSEVSSLED---GQR--------CTAKYSSAEPCTNGE 185
Query: 174 VPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIAD 233
V + L R Y+ + + + T +RI L + ++ + D + YAI+D
Sbjct: 186 VIYRALSPYERLDP--YSTDARSLLGVTNVRIRLLQPHSCPCPI-ADANAATPR-YAISD 241
Query: 234 ISVGARCKCNGHASEC-PYVRQSDGST--RRV----CRCEHNTAGPDCNECAPFYNDAPW 286
+ + C C+GHA +C P + + T + V C C H+TAG C C YND PW
Sbjct: 242 LILKGGCLCHGHADQCVPTGGKHNSKTFGKHVVHGKCSCRHHTAGDHCERCHRLYNDRPW 301
Query: 287 RRA---SDDANEC 296
R A + +AN+C
Sbjct: 302 RAADGLTGEANQC 314
Score = 37 (18.1 bits), Expect = 7.7e-24, Sum P(2) = 7.7e-24
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 276 ECAPFYNDAPWRRASDD 292
+C P+ D R SDD
Sbjct: 430 DCDPYTGDCMIRSESDD 446
>UNIPROTKB|F1P4B9 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02005946
EMBL:AADN02005947 EMBL:AADN02005948 EMBL:AADN02005949
EMBL:AADN02005950 IPI:IPI00810572 Ensembl:ENSGALT00000018614
ArrayExpress:F1P4B9 Uniprot:F1P4B9
Length = 551
Score = 182 (69.1 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 36/79 (45%), Positives = 45/79 (56%)
Query: 219 LDPSVLRSYFYAIADISVGARCKCNGHASECPYVR-----QSDGSTRRV---CRCEHNTA 270
L+P L + +YA+ D V C CNGHA C VR ++ G+ V C C+HNTA
Sbjct: 174 LEPPALPAPYYAVYDFIVKGSCFCNGHADHCVPVRGFRPVRAAGAFHVVHGKCMCKHNTA 233
Query: 271 GPDCNECAPFYNDAPWRRA 289
GP C CAP YND PW+ A
Sbjct: 234 GPHCQHCAPLYNDRPWQAA 252
Score = 154 (59.3 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 50/177 (28%), Positives = 72/177 (40%)
Query: 5 CIPPFENAAFSASVESTNTCGYQNGVPQPTRFCV--QSGT-HVTANTCDYCYED----TH 57
C P N A ++ + CG P FC + T TC +C H
Sbjct: 3 CNPRLGNLAHGRTLRTETACGSHAAEP----FCAYAEDATLRCKPPTCGHCSGAHAGLAH 58
Query: 58 PVRYLTD--LSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFA 115
P + D TWWQ+ D P Q I L TF T++ L+F SPRP +
Sbjct: 59 PPAAMADSPFRLPRTWWQAAG--DA---P-QETIQLDLEATFYFTHLILVFKSPRPAAMV 112
Query: 116 IYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGG 172
+ + +W +++++ +C T+GL DD + CTS YS P TGG
Sbjct: 113 LERSQDFGKTWQAYKYFATNCSATFGLEDDVVRRGAP------CTSRYSSPFPCTGG 163
Score = 108 (43.1 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 26/65 (40%), Positives = 30/65 (46%)
Query: 240 CKCNGHASECPYVRQ----SDGSTRRVC-RCEHNTAGPDCNECAP-FYNDA--PWRRASD 291
CKCNGHA C + S + VC C+HNT G C C P FY D P+ A D
Sbjct: 265 CKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFS-APD 323
Query: 292 DANEC 296
C
Sbjct: 324 ACKPC 328
Score = 59 (25.8 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 263 CRCEHNTAGPDCNECAPFY 281
C C+ AGP C+ C P Y
Sbjct: 353 CPCKPGVAGPRCDRCLPGY 371
>MGI|MGI:99915 [details] [associations]
symbol:Lamb3 "laminin, beta 3" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0005610 "laminin-5
complex" evidence=IDA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0050873
"brown fat cell differentiation" evidence=IDA] MGI:MGI:99915
GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:CH466555 GO:GO:0005610
GeneTree:ENSGT00620000087753 CTD:3914 eggNOG:NOG289025
HOGENOM:HOG000113279 HOVERGEN:HBG052302 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z ChiTaRS:LAMB3 EMBL:U43298 EMBL:AK155769
EMBL:BC008516 IPI:IPI00117093 RefSeq:NP_032510.2 UniGene:Mm.435441
ProteinModelPortal:Q61087 SMR:Q61087 STRING:Q61087
PhosphoSite:Q61087 PaxDb:Q61087 PRIDE:Q61087
Ensembl:ENSMUST00000016315 Ensembl:ENSMUST00000159955 GeneID:16780
KEGG:mmu:16780 InParanoid:Q91V90 NextBio:290632 Bgee:Q61087
CleanEx:MM_LAMB3 Genevestigator:Q61087
GermOnline:ENSMUSG00000026639 Uniprot:Q61087
Length = 1168
Score = 282 (104.3 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 85/306 (27%), Positives = 134/306 (43%)
Query: 5 CIPPFENAAFSAS--VESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCYE---DTHP 58
C PP + + + +++TCG + +P +C Q G + CD ++H
Sbjct: 26 CYPPVGDLLIGRTQLLRASSTCG----LTKPETYCTQYGQWQMKCCKCDSRLPRNYNSHR 81
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYK 118
V + S WWQS D + V++ L K + + + F P I +
Sbjct: 82 VENVASSSGPMRWWQSQN--D----VSPVSLQLDLDKRMQLQDIMMDFKGLTPAGMLIER 135
Query: 119 KTYENSSWTPFQFYSASCQETYGLPDDNSGKA-NDSDTRVFCTSEYSDLSPLTGGAVPFA 177
+ +W +Q+ + C T+ P + G+ N D R S+ + LTGG V
Sbjct: 136 SSDFGKTWRVYQYLATDCASTF--PQVHQGQPKNWQDVRCRPLSQRPN-GHLTGGKVQLN 192
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
++ A S + +QE T +R+ +L PS +YF A++ + +
Sbjct: 193 LMD-LASAIPASQSKKIQELGDITNLRVNFTKLAPVPQRGSYPPS---AYF-AVSQLRLQ 247
Query: 238 ARCKCNGHASECPYVRQSDGST-----RRVCRCEHNTAGPDCNECAPFYNDAPWRRAS-D 291
C C+GHA C GST VC C+HNTAGP+C+ CAPFYN+ PWR A
Sbjct: 248 GSCFCHGHADRC--APNPGGSTTAVQVNNVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQ 305
Query: 292 DANECR 297
D +EC+
Sbjct: 306 DTHECQ 311
>UNIPROTKB|F1LPI5 [details] [associations]
symbol:Lamb3 "Protein Lamb3" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0050873 "brown fat cell differentiation" evidence=IEA]
RGD:1562668 GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED IPI:IPI00363443 UniGene:Rn.49634
ProteinModelPortal:F1LPI5 Ensembl:ENSRNOT00000008440 NextBio:654049
ArrayExpress:F1LPI5 Uniprot:F1LPI5
Length = 1171
Score = 282 (104.3 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 86/307 (28%), Positives = 135/307 (43%)
Query: 5 CIPPFENAAFSAS--VESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCYE---DTHP 58
C PP + + + +++TCG + +P +C Q G + CD ++H
Sbjct: 26 CYPPVGDLLIGRTQLLRASSTCG----LTKPETYCTQYGQWQMKCCKCDSRLPRNYNSHR 81
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYK 118
V + S WWQS D + V++ L K + + + F P I +
Sbjct: 82 VENVVSSSGPMRWWQSQN--D----VSPVSLQLDLDKRMQLQDIMMDFKGLMPAGMLIER 135
Query: 119 KTYENSSWTPFQFYSASCQETYGLPDDNSGKA-NDSDTRVFCTSEYSDLSPLTGGAVPFA 177
+ +W +Q+ + C T+ P + G+ N D R S+ + LTGG V
Sbjct: 136 SSDFGKTWRVYQYLATDCASTF--PQVHQGQPKNWQDVRCRPLSQRPN-GHLTGGKVQLN 192
Query: 178 TLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISVG 237
++ A S + +QE T +R+ +L PS +YF A++ + +
Sbjct: 193 LMD-LASAIPASQSKKIQELGDITNLRVNFTKLAPVPQRGSYPPS---AYF-AVSQLRLQ 247
Query: 238 ARCKCNGHASEC-PYVRQSDGSTRRV-----CRCEHNTAGPDCNECAPFYNDAPWRRAS- 290
C C+GHA C P GST V C C+HNTAGP+C+ CAPFYN+ PWR A
Sbjct: 248 GSCFCHGHADRCAPNPGGPTGSTTAVQVNDVCVCQHNTAGPNCDRCAPFYNNRPWRPAEG 307
Query: 291 DDANECR 297
D +EC+
Sbjct: 308 QDIHECQ 314
>UNIPROTKB|F1MMK1 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005610 "laminin-5 complex" evidence=IEA] GO:GO:0050873
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005610
GeneTree:ENSGT00620000087753 OMA:RSQMEED EMBL:DAAA02043815
EMBL:DAAA02043816 IPI:IPI00712889 UniGene:Bt.16740
Ensembl:ENSBTAT00000022005 Uniprot:F1MMK1
Length = 1172
Score = 277 (102.6 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 84/308 (27%), Positives = 132/308 (42%)
Query: 5 CIPPFENAAFSAS--VESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCD----YCYEDTH 57
C PP + + + +++TCG + +P +C Q G + CD + Y ++H
Sbjct: 26 CYPPVGDLLIGRTRFLRASSTCG----LTKPETYCAQYGEWQMKCCKCDSRVAHNY-NSH 80
Query: 58 PVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
V + S T WWQS D + V + L + F + + + F P P I
Sbjct: 81 QVENVVSSSGPTRWWQSQN--D----VSPVFLQLDLDRKFQLQDIMMDFKGPVPAGLLIE 134
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKAND-SDTRVFCTSEYSDLSPLTGGAVPF 176
+ + +W +Q+ +A C + P G+ D R + + P GA
Sbjct: 135 RSSDFGKTWQVYQYLAADCGSAF--PWVRQGQPQGWQDARCQTLPQRPNGHP--NGAKVQ 190
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISV 236
L + + +QE T +R+ +L + PS +YA++ + +
Sbjct: 191 LNLMDLASGIPATQSQKIQELGEITNLRVNFTKLAPVPQRGYHPPSA----YYAVSQLRL 246
Query: 237 GARCKCNGHASEC-PYVRQ--SDGST---RRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
C C+GHA C P R S S VC C+HNTAGP+C CAPFYN+ PWR A
Sbjct: 247 HGSCLCHGHADRCAPSSRTPASPSSAVQVHEVCVCQHNTAGPNCERCAPFYNNRPWRPAE 306
Query: 291 D-DANECR 297
D D +EC+
Sbjct: 307 DQDPHECQ 314
>UNIPROTKB|F1NLU4 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IEA] GO:GO:0050873
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED EMBL:AADN02044975 IPI:IPI00592759
Ensembl:ENSGALT00000002051 Uniprot:F1NLU4
Length = 1165
Score = 274 (101.5 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 84/310 (27%), Positives = 135/310 (43%)
Query: 5 CIPPFENAAFSAS--VESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCDYCY---EDTHP 58
C PP + + +++TCG + +P +C G ++ CD + H
Sbjct: 23 CYPPGGDLLLGRGQHLTASSTCG----LTKPETYCTPHGEWNMRCCKCDSRLPHARNGHR 78
Query: 59 VRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYK 118
V + + WWQS + G++ V + L + F ++ + L F SP P + I +
Sbjct: 79 VANMLSSAGRARWWQSQS---GME---HVYLQLDLDEKFQLSSIVLDFRSPLPAAMLIER 132
Query: 119 KTYENSSWTPFQFYSASCQETYGLPDDNSGKAND-SDTRVFCTSEYSDLS-PLTGGAVPF 176
T +W +Q+ ++ C + P G D R C + P+ G V F
Sbjct: 133 STDFGKTWEVYQYLASDCAAAF--PHIPRGAPESWGDAR--CQPLQAQHGYPMHGSKVKF 188
Query: 177 ATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDPSVLRSYFYAIADISV 236
+ ++ T SY+ ++ + T +RI +L + PS FYA+ ++ V
Sbjct: 189 S-VQDLASTITTSYSQSVNKLGQFTNLRINFTQLPHIMHHNYRSPSS----FYAVTEMQV 243
Query: 237 GARCKCNGHASEC-----PYVRQSDGSTRRV---CRCEHNTAGPDCNECAPFYNDAPWRR 288
C CNGHA C P+ + S +V C C+HNTAGP+C CA YND PW
Sbjct: 244 LGSCFCNGHADRCIPSRDPHA-MDNCSLPQVHGRCECQHNTAGPNCGHCAALYNDRPWAP 302
Query: 289 ASD-DANECR 297
A D D +EC+
Sbjct: 303 AEDNDPHECQ 312
>UNIPROTKB|E1BP05 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060171 "stereocilium membrane" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0035315 "hair cell differentiation" evidence=IEA] [GO:0017022
"myosin binding" evidence=IEA] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0002142 "stereocilia ankle link complex"
evidence=IEA] InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0005604 GO:GO:0060113 Pfam:PF02210 GO:GO:0032421
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0002142 GO:GO:0048496 GeneTree:ENSGT00700000104042
InterPro:IPR006558 SMART:SM00560 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:DAAA02042466 EMBL:DAAA02042467
EMBL:DAAA02042468 EMBL:DAAA02042469 EMBL:DAAA02042470
EMBL:DAAA02042471 EMBL:DAAA02042472 EMBL:DAAA02042473
EMBL:DAAA02042474 EMBL:DAAA02042475 EMBL:DAAA02042476
EMBL:DAAA02042477 EMBL:DAAA02042478 EMBL:DAAA02042479
EMBL:DAAA02042480 EMBL:DAAA02042481 EMBL:DAAA02042482
EMBL:DAAA02042483 IPI:IPI00924139 Ensembl:ENSBTAT00000061112
Uniprot:E1BP05
Length = 5204
Score = 262 (97.3 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 76/271 (28%), Positives = 133/271 (49%)
Query: 35 RFCVQSGTH-VTANTCDYCYEDTHPVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKF 93
R+C+ + T N + HP+ ++ D +N T W S + Q V I++
Sbjct: 317 RYCIPNDAEDTTKNRVLRLNPEAHPLSFVND-NNVGTSWVSHVFTNMTQLSQGVTISIDL 375
Query: 94 GK-TFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPDDNSGKAND 152
+ V Y+ + F SP+P + I +K ++ W +Q+++ +C T+ + N+G +
Sbjct: 376 ENGQYQVFYIIIQFSSPQPTAVRIQRKKEDSLDWEDWQYFARNCS-TFRMK--NNGDLAN 432
Query: 153 SDTRVFCTSEYSDLSPLTGGAVPFATLE-GRYRAKTFS--YNL-NLQEFVTATEIRITLD 208
SD+ V C + + P + G V F+ L G + ++ YN +LQEFV AT++R+
Sbjct: 433 SDS-VNCL-QLPNFPPYSCGNVTFSVLTPGPNQRPGYNNFYNTPSLQEFVKATQVRLHFH 490
Query: 209 -RLNTFYDELFLDPSVLRSYFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEH 267
+ +T E + P R +Y + +I++ RC+C GHA+ C Q R +C E
Sbjct: 491 GQYHT--TETPVSP---RHRYYGVNEITITGRCQCYGHANHCDTTSQP---YRCLCSQES 542
Query: 268 NTAGPDCNECAPFYNDAPWRRASD-DANECR 297
T G C+ C P YN+ P+R++ A C+
Sbjct: 543 FTEGLHCDRCLPLYNNKPFRQSDHVHAFNCK 573
Score = 54 (24.1 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 22/59 (37%), Positives = 25/59 (42%)
Query: 7 PPFEN-AAFS-ASVESTN-TCGYQNGVPQPTRFCVQSGTHVTANTCDY--CYEDTHPVR 60
P EN AAF SV T TCG +P + FC S T C C +D P R
Sbjct: 38 PRLENVAAFKKVSVVPTQATCG----IPAQSTFCQSSATPEGLRVCPQRLCVQDC-PYR 91
>MGI|MGI:1341292 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10090 "Mus musculus" [GO:0001917 "photoreceptor inner
segment" evidence=ISO] [GO:0002141 "stereocilia ankle link"
evidence=NAS] [GO:0002142 "stereocilia ankle link complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005518 "collagen binding" evidence=ISO;IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0017022 "myosin binding" evidence=IPI]
[GO:0032391 "photoreceptor connecting cilium" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=IDA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045494 "photoreceptor cell maintenance"
evidence=ISO;IMP] [GO:0048496 "maintenance of organ identity"
evidence=ISO] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0050953 "sensory perception of light stimulus" evidence=ISO]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IMP]
[GO:0060171 "stereocilium membrane" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1341292 GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113 Pfam:PF02210
GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0002142 GO:GO:0048496 GO:GO:0060171
GeneTree:ENSGT00700000104042 CTD:7399 eggNOG:NOG245744
HOGENOM:HOG000124780 HOVERGEN:HBG094138 OMA:EIRIQAC
OrthoDB:EOG4B5P57 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AF151717 EMBL:DQ073638 EMBL:AC121799 EMBL:AC121892
EMBL:AC122122 EMBL:AC129312 EMBL:AC135863 EMBL:AC165230
IPI:IPI00720231 IPI:IPI00742431 IPI:IPI01007786 RefSeq:NP_067383.3
UniGene:Mm.331238 ProteinModelPortal:Q2QI47 STRING:Q2QI47
PhosphoSite:Q2QI47 PRIDE:Q2QI47 Ensembl:ENSMUST00000060479
GeneID:22283 KEGG:mmu:22283 UCSC:uc007eae.1 UCSC:uc007eaf.1
ChiTaRS:USH2A NextBio:302411 Bgee:Q2QI47 Genevestigator:Q2QI47
GermOnline:ENSMUSG00000026609 Uniprot:Q2QI47
Length = 5193
Score = 266 (98.7 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 79/276 (28%), Positives = 134/276 (48%)
Query: 31 PQPTRFCVQSGTHVTA-NTCDYCYEDTHPVRYLTDLSNTTTWWQS-----TTMYDGVQWP 84
P ++C+ +G T + + HP+ ++ D T+W T +Y+GV
Sbjct: 310 PSVQQYCIPNGAGDTPEHRMSRLNPEAHPLSFINDDDVATSWISHVFTNITQLYEGVA-- 367
Query: 85 NQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETYGLPD 144
++I L+ G+ + V V F S +P + I +K ++S W +Q+++ +C +G+ D
Sbjct: 368 --ISIDLENGQ-YQVLKVITQFSSLQPVAIRIQRKKADSSPWEDWQYFARNCS-VWGMKD 423
Query: 145 DNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATL-EGRYRAKTFS--YNLN-LQEFVTA 200
N N + V C + D P + G V F L G+ ++ YN + LQEF+ A
Sbjct: 424 -NEDLENPNS--VNCL-QLPDFIPFSHGNVTFDLLTSGQKHRPGYNDFYNSSVLQEFMRA 479
Query: 201 TEIRITLDRLNTFYDELFLDPSVL--RSYFYAIADISVGARCKCNGHASECPYVRQSDGS 258
T+IR+ F+ + + + R +YA+ +I V RC+C+GHA C R+
Sbjct: 480 TQIRLH------FHGQYYPAGHTVDWRHQYYAVDEIIVSGRCQCHGHAETCDRTRRP--- 530
Query: 259 TRRVCRCEHNTAGPDCNECAPFYNDAPWRRASDDAN 294
R +C T GP C+ C+P YND P+R + D+ N
Sbjct: 531 YRCLCSPHSFTEGPQCDRCSPLYNDKPFR-SGDNVN 565
>UNIPROTKB|F1NEW2 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI01017205 Ensembl:ENSGALT00000014992 OMA:THKKACK
Uniprot:F1NEW2
Length = 336
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 38/71 (53%), Positives = 51/71 (71%)
Query: 227 YFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPW 286
Y+Y++ ++ VG RCKCNGHAS C V+ D + VC C+HNT GP+C+ C PF+ D PW
Sbjct: 4 YYYSVGELQVGGRCKCNGHASRC--VK--DKEQKLVCDCKHNTEGPECDRCKPFHYDRPW 59
Query: 287 RRASD-DANEC 296
+RAS +ANEC
Sbjct: 60 QRASAREANEC 70
>UNIPROTKB|F1NK85 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI00819575 Ensembl:ENSGALT00000039263 Uniprot:F1NK85
Length = 330
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 38/71 (53%), Positives = 51/71 (71%)
Query: 227 YFYAIADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPW 286
Y+Y++ ++ VG RCKCNGHAS C V+ D + VC C+HNT GP+C+ C PF+ D PW
Sbjct: 1 YYYSVGELQVGGRCKCNGHASRC--VK--DKEQKLVCDCKHNTEGPECDRCKPFHYDRPW 56
Query: 287 RRASD-DANEC 296
+RAS +ANEC
Sbjct: 57 QRASAREANEC 67
>UNIPROTKB|Q91429 [details] [associations]
symbol:laminin alpha 1 chain "Laminin alpha 1 chain"
species:9031 "Gallus gallus" [GO:0002011 "morphogenesis of an
epithelial sheet" evidence=IEA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005606 "laminin-1
complex" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0007166 "cell
surface receptor signaling pathway" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] GO:GO:0005615
GO:GO:0005911 GO:GO:0007166 GO:GO:0005201 GO:GO:0043208
GeneTree:ENSGT00700000104140 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOGENOM:HOG000293201
OrthoDB:EOG4K3KVB GO:GO:0005606 GO:GO:0005608 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 EMBL:S80617 IPI:IPI00822472
UniGene:Gga.49380 STRING:Q91429 Ensembl:ENSGALT00000036889
InParanoid:Q91429 Uniprot:Q91429
Length = 174
Score = 184 (69.8 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 57/175 (32%), Positives = 87/175 (49%)
Query: 76 TMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWS-PRPESFAIYKKTYENSSWTPFQFYSA 134
++ +G Q+ + V ITL + F V YV + + PRP ++ I +++ + + + P+Q+Y+
Sbjct: 2 SIQNGRQY-HWVTITLDLRQVFQVAYVIIKSANAPRPGNW-ILERSIDGTEFKPWQYYAI 59
Query: 135 S---CQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEGRYRAKTFSYN 191
S C Y + D V CTS YS L PL G + + + GR A S
Sbjct: 60 SDTECLTRYNITPRVGPPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSQK 119
Query: 192 LNLQEFVTATEIRITLDRLNTFYDELF---------LDPSVLRSYFYAIADISVG 237
L +F +A IR+ L R+ T +L LDP V R Y+Y+I DISVG
Sbjct: 120 L--LDFTSARYIRLRLQRIRTLNADLMTLSHHDPKELDPIVTRRYYYSIKDISVG 172
>UNIPROTKB|F5H520 [details] [associations]
symbol:LAMB2 "Laminin subunit beta-2" species:9606 "Homo
sapiens" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005608
"laminin-3 complex" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005608 HGNC:HGNC:6487
ChiTaRS:LAMB2 GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:AC135506 IPI:IPI00743203 ProteinModelPortal:F5H520 SMR:F5H520
PRIDE:F5H520 Ensembl:ENST00000494831 ArrayExpress:F5H520
Bgee:F5H520 Uniprot:F5H520
Length = 151
Score = 175 (66.7 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 44/149 (29%), Positives = 72/149 (48%)
Query: 104 LLFWSPRPESFAIYKKTYENSSWTPFQFYSASCQETY-GLPDDNSGKANDSDTRVFCTSE 162
+ F + RP + + + +W ++++S C + G+P +D V C S
Sbjct: 1 MTFKTFRPAAMLVERSADFGRTWHVYRYFSYDCGADFPGVPLAPPRHWDD----VVCESR 56
Query: 163 YSDLSPLTGGAVPFATLEGRYRAKTFSYNLNLQEFVTATEIRITLDRLNTFYDELFLDP- 221
YS++ P T G V + L+ Y+ +Q + T +R+ L RL+T D L LDP
Sbjct: 57 YSEIEPSTEGEVIYRVLDPAIPIPD-PYSSRIQNLLKITNLRVNLTRLHTLGDNL-LDPR 114
Query: 222 -SVLRSYFYAIADISVGARCKCNGHASEC 249
+ Y+YA+ ++ V C C GHASEC
Sbjct: 115 REIREKYYYALYELVVRGNCFCYGHASEC 143
>UNIPROTKB|F8W0I7 [details] [associations]
symbol:NTN4 "Netrin-4" species:9606 "Homo sapiens"
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] GO:GO:0016322
GO:GO:0005604 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HGNC:HGNC:13658 ChiTaRS:NTN4 GO:GO:0060668
EMBL:AC008128 EMBL:AC090001 IPI:IPI01022535
ProteinModelPortal:F8W0I7 SMR:F8W0I7 Ensembl:ENST00000547980
ArrayExpress:F8W0I7 Bgee:F8W0I7 Uniprot:F8W0I7
Length = 176
Score = 167 (63.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 55/182 (30%), Positives = 79/182 (43%)
Query: 11 NAAFSASVESTNTCGYQNGVPQPTRFCVQS-GTHVTANT--CDYC---YED-THPVRYLT 63
N A + + TCG QN +C S T +T CD C Y H +
Sbjct: 3 NLALGRKLWADTTCG-QNATEL---YCFYSENTDLTCRQPKCDKCNAAYPHLAHLPSAMA 58
Query: 64 DLSNT--TTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTY 121
D S TWWQS + V ++ I L F T++ ++F SPRP + + +
Sbjct: 59 DSSFRFPRTWWQSA---EDV---HREKIQLDLEAEFYFTHLIVMFKSPRPAAMVLDRSQD 112
Query: 122 ENSSWTPFQFYSASCQETYGLPDDNSGKANDSDTRVFCTSEYSDLSPLTGGAVPFATLEG 181
+W P+++++ +C T+GL DD K CTS+YS P TGG V F L
Sbjct: 113 FGKTWKPYKYFATNCSATFGLEDDVVKKG------AICTSKYSSPFPCTGGEVIFKALSP 166
Query: 182 RY 183
Y
Sbjct: 167 PY 168
>UNIPROTKB|F1M1L0 [details] [associations]
symbol:RGD1565947 "Protein RGD1565947" species:10116
"Rattus norvegicus" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0016322
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
PROSITE:PS51117 GO:GO:0060668 IPI:IPI00948933
Ensembl:ENSRNOT00000064724 ArrayExpress:F1M1L0 Uniprot:F1M1L0
Length = 408
Score = 173 (66.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 48/136 (35%), Positives = 61/136 (44%)
Query: 174 VPFATLEGRYRAKTFSYNLNLQEFVTATEIRITL-DRLNTFYDELFLDPSVLRSYFYAIA 232
V F L Y + Y+ +QE + T +R+ L R + L+ YAI
Sbjct: 2 VIFRALSPPYDIEN-PYSAKVQEQLKITNLRVRLLKRQSCPCQRNDLNAKPHHFTHYAIY 60
Query: 233 DISVGARCKCNGHASECPYVR-----QSDGSTRRV---CRCEHNTAGPDCNECAPFYNDA 284
D V C CNGHA +C V ++ G+ V C C+HNTAG C CAP YND
Sbjct: 61 DFIVKGSCFCNGHADQCLPVEGFRPVKAPGAFHVVHGKCMCKHNTAGSHCQHCAPLYNDR 120
Query: 285 PWRRASDDA---NECR 297
PW A NECR
Sbjct: 121 PWEAADGRTGAPNECR 136
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 26/64 (40%), Positives = 34/64 (53%)
Query: 240 CKCNGHASECPY---VRQSDGS-TRRVCR-CEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
CKCNGHA C + V ++ G+ + VC C+HNT G C C P FY D RR
Sbjct: 138 CKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDL--RRPFSAP 195
Query: 294 NECR 297
+ C+
Sbjct: 196 DACK 199
>RGD|1565947 [details] [associations]
symbol:Ntn4 "netrin 4" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO] [GO:0016322 "neuron remodeling"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=ISO] InterPro:IPR001134 PROSITE:PS50189 RGD:1565947
GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 PROSITE:PS51117
GeneTree:ENSGT00700000104042 GO:GO:0060668 IPI:IPI00359984
Ensembl:ENSRNOT00000007412 ArrayExpress:F1M4Q9 Uniprot:F1M4Q9
Length = 436
Score = 173 (66.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 48/136 (35%), Positives = 61/136 (44%)
Query: 174 VPFATLEGRYRAKTFSYNLNLQEFVTATEIRITL-DRLNTFYDELFLDPSVLRSYFYAIA 232
V F L Y + Y+ +QE + T +R+ L R + L+ YAI
Sbjct: 2 VIFRALSPPYDIEN-PYSAKVQEQLKITNLRVRLLKRQSCPCQRNDLNAKPHHFTHYAIY 60
Query: 233 DISVGARCKCNGHASECPYVR-----QSDGSTRRV---CRCEHNTAGPDCNECAPFYNDA 284
D V C CNGHA +C V ++ G+ V C C+HNTAG C CAP YND
Sbjct: 61 DFIVKGSCFCNGHADQCLPVEGFRPVKAPGAFHVVHGKCMCKHNTAGSHCQHCAPLYNDR 120
Query: 285 PWRRASDDA---NECR 297
PW A NECR
Sbjct: 121 PWEAADGRTGAPNECR 136
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 26/64 (40%), Positives = 34/64 (53%)
Query: 240 CKCNGHASECPY---VRQSDGS-TRRVCR-CEHNTAGPDCNECAP-FYNDAPWRRASDDA 293
CKCNGHA C + V ++ G+ + VC C+HNT G C C P FY D RR
Sbjct: 138 CKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDL--RRPFSAP 195
Query: 294 NECR 297
+ C+
Sbjct: 196 DACK 199
>UNIPROTKB|G5E6L9 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 EMBL:DAAA02047467
Ensembl:ENSBTAT00000063836 Uniprot:G5E6L9
Length = 446
Score = 140 (54.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 26/60 (43%), Positives = 33/60 (55%)
Query: 231 IADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
+A V RC+C+GHA+ C D R CRC H+T GP C C P + D PWR A+
Sbjct: 168 LAAAGVRGRCQCHGHAARCA---ARDRPPR--CRCRHHTTGPGCESCQPSHRDWPWRPAT 222
Score = 43 (20.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 80 GVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSW 126
G + P ++TL G F ++ V L F +P P + + W
Sbjct: 76 GPRAPCNGSLTLGLGGPFLLSSVSLRFCTPGPPALVLSAAWATGGPW 122
>UNIPROTKB|F1MF28 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 CTD:126147 OMA:GGPFLLT
EMBL:DAAA02047467 IPI:IPI01001483 RefSeq:NP_001193801.1
UniGene:Bt.48155 Ensembl:ENSBTAT00000061223 GeneID:785970
KEGG:bta:785970 NextBio:20927619 Uniprot:F1MF28
Length = 489
Score = 140 (54.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 26/60 (43%), Positives = 33/60 (55%)
Query: 231 IADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
+A V RC+C+GHA+ C D R CRC H+T GP C C P + D PWR A+
Sbjct: 148 LAAAGVRGRCQCHGHAARCA---ARDRPPR--CRCRHHTTGPGCESCQPSHRDWPWRPAT 202
Score = 43 (20.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 80 GVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSW 126
G + P ++TL G F ++ V L F +P P + + W
Sbjct: 56 GPRAPCNGSLTLGLGGPFLLSSVSLRFCTPGPPALVLSAAWATGGPW 102
>MGI|MGI:2685330 [details] [associations]
symbol:Ntn5 "netrin 5" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:2685330 GO:GO:0005576
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 EMBL:AC167242 HOGENOM:HOG000286017
GeneTree:ENSGT00700000104042 CTD:126147 eggNOG:NOG327968
HOVERGEN:HBG096704 OMA:GGPFLLT OrthoDB:EOG402WS1 EMBL:AK142898
EMBL:BC150901 IPI:IPI00876295 IPI:IPI00923643 RefSeq:NP_001028528.2
UniGene:Mm.291240 ProteinModelPortal:Q3UQ22 SMR:Q3UQ22 PRIDE:Q3UQ22
Ensembl:ENSMUST00000107742 GeneID:243967 KEGG:mmu:243967
InParanoid:Q3UQ22 NextBio:386070 CleanEx:MM_GM484
Genevestigator:Q3UQ22 Uniprot:Q3UQ22
Length = 452
Score = 134 (52.2 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
V RC+C+GHA+ C Q CRC H+T GP C C P + D PWR A+
Sbjct: 169 VRGRCQCHGHAARCATRAQPPR-----CRCRHHTTGPGCESCRPSHRDWPWRPAT 218
Score = 43 (20.2 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 5 CIPPFENAAFSASVESTNTCGYQNGVPQP 33
C+PP A+ + TC P P
Sbjct: 47 CLPPVTQLVGKAAAPCSQTCALPAASPGP 75
Score = 38 (18.4 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 88 NITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSWTP 128
++TL +F +T V L F + P + + W P
Sbjct: 80 SLTLDLDGSFLLTSVTLRFCTAGPPALVLSAAWATGGPWRP 120
>UNIPROTKB|F1RIQ1 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:CU929759 Ensembl:ENSSSCT00000003491 Uniprot:F1RIQ1
Length = 489
Score = 137 (53.3 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 231 IADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
+A V RC+C+GHA+ C Q CRC H+T GP C C P + D PWR A+
Sbjct: 148 LAAAGVRGRCQCHGHAARCAARAQPPR-----CRCRHHTTGPGCESCRPSHRDWPWRPAT 202
Score = 44 (20.5 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 88 NITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSW 126
++TL G F +T V L F +P P + + W
Sbjct: 64 SMTLGLGGPFLLTSVSLRFCTPGPPALVLSAAWTSGGPW 102
>RGD|1565197 [details] [associations]
symbol:Ntn5 "netrin 5" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 RGD:1565197 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OrthoDB:EOG402WS1
IPI:IPI00367517 Ensembl:ENSRNOT00000028524 UCSC:RGD:1565197
Uniprot:D3ZT86
Length = 448
Score = 134 (52.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 236 VGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
V RC+C+GHA+ C Q CRC H+T GP C C P + D PWR A+
Sbjct: 169 VRGRCQCHGHAARCAARAQPPR-----CRCRHHTTGPGCESCRPSHRDWPWRPAT 218
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 5 CIPPFENAAFSASVESTNTCGYQNGVPQP 33
C+PP A+ + TC P P
Sbjct: 47 CLPPVTQLVGKAAAPCSQTCALPADSPDP 75
>UNIPROTKB|Q8WTR8 [details] [associations]
symbol:NTN5 "Netrin-5" species:9606 "Homo sapiens"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 PROSITE:PS00022 PROSITE:PS01186
EMBL:CH471177 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
HOGENOM:HOG000286017 EMBL:BC018654 EMBL:BC018697 EMBL:BC021210
EMBL:BC033207 IPI:IPI00102812 IPI:IPI00645833 RefSeq:NP_665806.1
UniGene:Hs.326217 ProteinModelPortal:Q8WTR8 SMR:Q8WTR8
DMDM:74730628 PaxDb:Q8WTR8 PRIDE:Q8WTR8 Ensembl:ENST00000270235
GeneID:126147 KEGG:hsa:126147 UCSC:uc002pkb.3 UCSC:uc002pkc.3
CTD:126147 GeneCards:GC19M049164 HGNC:HGNC:25208 neXtProt:NX_Q8WTR8
PharmGKB:PA164724232 eggNOG:NOG327968 HOVERGEN:HBG096704
InParanoid:Q8WTR8 OMA:GGPFLLT OrthoDB:EOG402WS1 GenomeRNAi:126147
NextBio:81704 Bgee:Q8WTR8 Genevestigator:Q8WTR8 Uniprot:Q8WTR8
Length = 489
Score = 127 (49.8 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 231 IADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
+A + RC+C+GHA+ C + R C C H+T GP C C P + D PWR A+
Sbjct: 148 LAAAGLRGRCQCHGHAARCA----ARARPPR-CHCRHHTTGPGCESCRPSHRDWPWRPAT 202
Score = 45 (20.9 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 88 NITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSW 126
++TL G F +T V L F +P P + + W
Sbjct: 64 SLTLALGGPFLLTSVSLRFCTPGPPALILSAAWASGGPW 102
>UNIPROTKB|Q5THA1 [details] [associations]
symbol:LAMB3 "Laminin subunit beta-3" species:9606 "Homo
sapiens" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IEA] GO:GO:0050873
EMBL:AL031316 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:AL023754 GO:GO:0005610 UniGene:Hs.497636
HGNC:HGNC:6490 ChiTaRS:LAMB3 HOVERGEN:HBG092822 IPI:IPI00478330
SMR:Q5THA1 STRING:Q5THA1 Ensembl:ENST00000415782
HOGENOM:HOG000168985 Uniprot:Q5THA1
Length = 188
Score = 115 (45.5 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 41/165 (24%), Positives = 67/165 (40%)
Query: 5 CIPPFENAAFSAS--VESTNTCGYQNGVPQPTRFCVQSGT-HVTANTCD----YCYEDTH 57
C PP + + + +++TCG + +P +C Q G + CD + Y +H
Sbjct: 26 CYPPVGDLLVGRTRFLRASSTCG----LTKPETYCTQYGEWQMKCCKCDSRQPHNYY-SH 80
Query: 58 PVRYLTDLSNTTTWWQSTTMYDGVQWPNQVNITLKFGKTFDVTYVRLLFWSPRPESFAIY 117
V + S WWQS D N V++ L + F + V + F P P I
Sbjct: 81 RVENVASSSGPMRWWQSQN--D----VNPVSLQLDLDRRFQLQEVMMEFQGPMPAGMLIE 134
Query: 118 KKTYENSSWTPFQFYSASCQETYGLPDDNSGKAND-SDTRVFCTS 161
+ + +W +Q+ +A C T+ P G+ D R C S
Sbjct: 135 RSSDFGKTWRVYQYLAADCTSTF--PRVRQGRPQSWQDVR--CQS 175
>UNIPROTKB|E2RRE4 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:AAEX03000816 Ensembl:ENSCAFT00000006331 Uniprot:E2RRE4
Length = 489
Score = 125 (49.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 231 IADISVGARCKCNGHASECPYVRQSDGSTRRVCRCEHNTAGPDCNECAPFYNDAPWRRAS 290
+A V RC+C+GHA+ C + R CRC H+T G C C P + D PWR A+
Sbjct: 148 LAAAGVRGRCQCHGHAARCA----ARARPPR-CRCRHHTTGLGCESCRPSHRDWPWRPAT 202
Score = 38 (18.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 88 NITLKFGKTFDVTYVRLLFWSPRPESFAIYKKTYENSSW 126
++TL G F +T V L F +P + + W
Sbjct: 64 SLTLALGGPFLLTSVSLRFCTPGSPALVLSAAWANGGPW 102
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.434 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 297 297 0.00093 115 3 11 22 0.38 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 147
No. of states in DFA: 620 (66 KB)
Total size of DFA: 260 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.31u 0.09s 23.40t Elapsed: 00:00:17
Total cpu time: 23.36u 0.09s 23.45t Elapsed: 00:00:17
Start: Thu Aug 15 12:35:08 2013 End: Thu Aug 15 12:35:25 2013
WARNINGS ISSUED: 1