Query psy1547
Match_columns 216
No_of_seqs 129 out of 1754
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 21:52:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1547.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1547hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ad9_A Lactb2, beta-lactamase- 100.0 7.4E-39 2.5E-43 254.1 23.0 204 1-207 2-206 (289)
2 2zo4_A Metallo-beta-lactamase 100.0 5.8E-34 2E-38 228.5 19.9 192 9-207 2-239 (317)
3 3l6n_A Metallo-beta-lactamase; 100.0 6.8E-33 2.3E-37 211.2 13.5 193 7-209 6-208 (219)
4 1m2x_A Class B carbapenemase B 100.0 1.3E-32 4.5E-37 210.3 13.8 189 7-205 3-200 (223)
5 4eyb_A Beta-lactamase NDM-1; m 100.0 3.9E-33 1.3E-37 219.1 8.5 192 8-206 51-255 (270)
6 3q6v_A Beta-lactamase; metallo 100.0 1.8E-32 6.3E-37 210.5 11.9 198 1-212 1-222 (233)
7 4hl2_A Beta-lactamase NDM-1; s 100.0 2.6E-33 8.8E-38 216.9 7.1 193 7-206 23-228 (243)
8 1mqo_A Beta-lactamase II; alph 100.0 2.7E-32 9.2E-37 209.1 11.8 192 7-208 17-217 (227)
9 3iog_A Beta-lactamase; hydrola 100.0 3.1E-32 1.1E-36 208.5 12.0 191 7-211 4-214 (227)
10 3hnn_A Putative diflavin flavo 100.0 4.6E-32 1.6E-36 212.1 13.0 193 7-207 10-237 (262)
11 1a7t_A Metallo-beta-lactamase; 100.0 2.9E-32 1E-36 209.6 10.3 191 7-207 12-212 (232)
12 1k07_A FEZ-1 beta-lactamase; m 100.0 1.1E-31 3.8E-36 210.0 13.4 189 7-209 9-223 (263)
13 3m8t_A 'BLR6230 protein; subcl 100.0 1.3E-31 4.3E-36 212.7 13.9 189 7-209 39-250 (294)
14 1jjt_A IMP-1 metallo beta-lact 100.0 4.5E-32 1.5E-36 208.0 10.5 191 7-208 8-204 (228)
15 2vw8_A PA1000, PQSE; quinolone 100.0 2E-31 7E-36 212.6 13.8 193 4-207 5-229 (303)
16 2fhx_A SPM-1; metallo-beta-lac 100.0 2.4E-31 8.2E-36 206.0 13.5 190 7-207 11-227 (246)
17 2y8b_A Metallo-B-lactamase; hy 100.0 2.9E-31 1E-35 207.9 10.6 191 7-206 44-244 (265)
18 1xm8_A Glyoxalase II; structur 100.0 3E-30 1E-34 200.8 15.6 158 31-206 12-174 (254)
19 2xf4_A Hydroxyacylglutathione 100.0 2.9E-30 9.8E-35 195.5 15.0 172 29-208 11-199 (210)
20 1sml_A Protein (penicillinase) 100.0 5.2E-30 1.8E-34 201.1 15.6 193 7-213 22-237 (269)
21 2zwr_A Metallo-beta-lactamase 100.0 7.5E-30 2.6E-34 192.9 14.7 167 29-207 11-190 (207)
22 4ax1_B Metallo-beta-lactamase 100.0 1.3E-29 4.6E-34 201.7 15.0 186 7-206 42-255 (303)
23 4efz_A Metallo-beta-lactamase 100.0 3.3E-29 1.1E-33 199.3 15.4 174 29-205 15-220 (298)
24 2qed_A Hydroxyacylglutathione 100.0 3E-29 1E-33 195.5 14.2 156 30-206 18-177 (258)
25 2gcu_A Putative hydroxyacylglu 100.0 1.2E-28 4.2E-33 190.8 16.9 157 30-204 14-186 (245)
26 1qh5_A Glyoxalase II, protein 100.0 4.9E-29 1.7E-33 194.5 14.2 157 30-206 11-178 (260)
27 2p97_A Hypothetical protein; p 100.0 1E-28 3.4E-33 185.9 15.2 175 8-207 2-187 (201)
28 2cfu_A SDSA1; SDS-hydrolase, l 100.0 4.9E-29 1.7E-33 216.6 15.1 193 5-208 104-351 (658)
29 2ohh_A Type A flavoprotein FPR 100.0 5.4E-29 1.9E-33 205.8 14.4 198 7-207 4-239 (404)
30 2p18_A Glyoxalase II; metallop 100.0 3E-28 1E-32 194.6 15.5 165 30-206 39-231 (311)
31 3tp9_A Beta-lactamase and rhod 100.0 6.1E-28 2.1E-32 203.4 18.1 166 29-205 14-203 (474)
32 1e5d_A Rubredoxin\:oxygen oxid 100.0 1.5E-28 5E-33 203.1 13.9 192 7-207 2-232 (402)
33 2q9u_A A-type flavoprotein; fl 100.0 2.2E-28 7.4E-33 202.9 14.6 193 7-207 9-236 (414)
34 4dik_A Flavoprotein; TM0755, e 100.0 1.3E-28 4.6E-33 202.8 12.7 192 6-207 16-246 (410)
35 3r2u_A Metallo-beta-lactamase 100.0 1.4E-27 4.7E-32 200.6 19.1 164 29-204 35-222 (466)
36 1ycg_A Nitric oxide reductase; 100.0 3.7E-28 1.3E-32 200.4 14.5 193 7-207 2-233 (398)
37 3adr_A Putative uncharacterize 100.0 8.4E-27 2.9E-31 181.9 18.1 181 12-207 3-213 (261)
38 2yhe_A SEC-alkyl sulfatase; hy 99.9 1.7E-29 5.9E-34 218.6 0.0 194 5-209 114-363 (668)
39 1ztc_A Hypothetical protein TM 99.9 3.7E-27 1.3E-31 179.9 6.0 178 12-208 20-218 (221)
40 3dha_A N-acyl homoserine lacto 99.9 2.2E-26 7.5E-31 178.9 8.3 171 29-207 37-245 (254)
41 3aj3_A MLR6805 protein, 4-pyri 99.9 2.4E-25 8.1E-30 174.9 9.7 171 29-208 33-259 (274)
42 2r2d_A AGR_PTI_140P, Zn-depend 99.9 2.3E-24 8E-29 169.4 12.6 169 30-205 42-263 (276)
43 1p9e_A Methyl parathion hydrol 99.9 1.2E-25 4E-30 181.3 2.4 181 30-215 96-322 (331)
44 3esh_A Protein similar to meta 99.9 3.7E-25 1.3E-29 174.4 5.2 172 30-206 47-256 (280)
45 1zkp_A Hypothetical protein BA 99.8 2.8E-20 9.6E-25 145.5 12.2 182 15-205 27-239 (268)
46 3zq4_A Ribonuclease J 1, RNAse 99.8 9.6E-20 3.3E-24 155.6 5.4 141 28-171 19-169 (555)
47 3g1p_A Protein PHNP; C-P lyase 99.7 1.7E-17 5.9E-22 129.0 11.3 129 28-169 36-167 (258)
48 3bk2_A RNAse J, metal dependen 99.7 5.3E-18 1.8E-22 145.3 9.0 142 29-170 28-183 (562)
49 3iek_A Ribonuclease TTHA0252; 99.7 1.6E-18 5.4E-23 144.2 5.1 169 30-202 13-224 (431)
50 2ycb_A Beta-CAsp RNAse, cleava 99.7 3.8E-17 1.3E-21 141.9 10.1 170 30-202 192-417 (636)
51 2az4_A Hypothetical protein EF 99.7 1.2E-16 4E-21 133.0 11.4 135 30-170 19-193 (429)
52 3kl7_A Putative metal-dependen 99.7 9.1E-17 3.1E-21 123.3 9.9 155 30-210 36-217 (235)
53 2xr1_A Cleavage and polyadenyl 99.7 2.1E-17 7.1E-22 143.5 6.1 132 30-167 196-356 (640)
54 3md7_A Beta-lactamase-like; ss 99.7 2.7E-16 9.1E-21 124.6 11.8 163 31-205 63-266 (293)
55 2i7x_A Protein CFT2; polyadeny 99.7 7.5E-17 2.6E-21 141.2 9.3 139 29-168 13-181 (717)
56 2i7t_A Cleavage and polyadenyl 99.7 3.5E-17 1.2E-21 137.3 4.6 137 30-169 24-182 (459)
57 2bib_A CBPE, teichoic acid pho 99.7 1.6E-15 5.5E-20 129.8 14.1 161 30-202 17-230 (547)
58 2cbn_A Ribonuclease Z; phospho 99.6 2.4E-15 8.1E-20 119.6 12.4 125 27-157 16-152 (306)
59 1y44_A Ribonuclease Z; zinc-de 99.6 3.5E-15 1.2E-19 119.4 12.1 122 27-157 15-150 (320)
60 2e7y_A TRNAse Z; tRNA maturati 99.6 1.8E-15 6.1E-20 118.7 9.3 115 31-157 12-146 (280)
61 3af5_A Putative uncharacterize 99.6 5.5E-16 1.9E-20 134.9 6.0 136 30-168 201-369 (651)
62 2wyl_A L-ascorbate-6-phosphate 99.5 2.1E-14 7.2E-19 116.8 10.4 169 30-205 44-285 (360)
63 2p4z_A Metal-dependent hydrola 99.5 1E-13 3.5E-18 109.1 13.8 172 29-207 31-261 (284)
64 3zwf_A Zinc phosphodiesterase 99.5 7.7E-14 2.6E-18 113.7 12.6 79 24-107 12-98 (368)
65 3jxp_A Coenzyme PQQ synthesis 99.5 4.5E-14 1.5E-18 113.0 9.0 133 29-168 39-203 (321)
66 3bv6_A Metal-dependent hydrola 99.5 1E-13 3.5E-18 113.4 11.1 172 30-205 68-310 (379)
67 3rpc_A Possible metal-dependen 99.5 1.8E-13 6.2E-18 106.6 9.7 162 30-205 11-230 (264)
68 1vjn_A Zn-dependent hydrolase 99.4 7.6E-13 2.6E-17 100.4 9.3 133 29-205 18-177 (220)
69 4b87_A DNA cross-LINK repair 1 99.4 3.9E-13 1.3E-17 109.3 4.7 112 36-170 32-146 (367)
70 3h3e_A Uncharacterized protein 99.4 1.1E-11 3.6E-16 96.3 12.5 158 29-205 30-240 (267)
71 3zdk_A 5' exonuclease apollo; 99.2 1.3E-11 4.3E-16 99.2 4.5 91 69-168 24-123 (336)
72 3h3e_A Uncharacterized protein 62.2 38 0.0013 25.7 7.8 14 6-19 121-134 (267)
73 1ii7_A MRE11 nuclease; RAD50, 45.1 21 0.00073 27.7 4.0 46 159-205 42-89 (333)
74 3s5j_B Ribose-phosphate pyroph 30.5 54 0.0019 25.7 4.1 41 39-80 213-253 (326)
75 1dku_A Protein (phosphoribosyl 30.2 48 0.0016 25.8 3.7 41 40-81 218-258 (317)
76 3dah_A Ribose-phosphate pyroph 30.1 54 0.0018 25.6 4.0 40 39-79 216-255 (319)
77 3lrt_A Ribose-phosphate pyroph 30.0 57 0.002 25.0 4.1 32 44-80 212-243 (286)
78 2ji4_A Phosphoribosyl pyrophos 28.8 60 0.002 26.0 4.1 24 56-79 288-311 (379)
79 1uf3_A Hypothetical protein TT 28.0 82 0.0028 22.2 4.6 42 159-205 34-77 (228)
80 3av0_A DNA double-strand break 27.9 41 0.0014 26.8 3.0 46 159-205 62-109 (386)
81 1u9y_A RPPK;, ribose-phosphate 25.1 57 0.002 24.9 3.3 41 39-80 205-245 (284)
82 3i0p_A Malate dehydrogenase; a 24.5 1.7E+02 0.0058 23.3 6.0 56 33-92 74-133 (365)
83 2q8u_A Exonuclease, putative; 23.6 52 0.0018 25.5 2.9 47 159-205 63-110 (336)
84 2ixd_A LMBE-related protein; h 22.7 53 0.0018 24.4 2.6 44 46-92 76-123 (242)
85 1z2i_A Malate dehydrogenase; s 22.5 2E+02 0.0067 22.9 6.0 56 33-92 76-135 (358)
86 2x06_A L-sulfolactate dehydrog 22.3 1.9E+02 0.0067 22.7 5.9 57 33-93 67-127 (344)
87 1nxu_A Hypothetical oxidoreduc 22.0 1.7E+02 0.0059 22.9 5.5 56 33-92 67-126 (333)
88 4h8a_A Ureidoglycolate dehydro 21.1 1.9E+02 0.0064 22.8 5.5 56 33-92 69-128 (339)
89 2p10_A MLL9387 protein; putati 20.8 23 0.00078 27.2 0.2 34 179-212 211-244 (286)
No 1
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.4e-39 Score=254.06 Aligned_cols=204 Identities=54% Similarity=0.899 Sum_probs=175.9
Q ss_pred CCCCCCCccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCc
Q psy1547 1 MSAKIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHN 80 (216)
Q Consensus 1 m~~~~~~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~ 80 (216)
|+++++.+.+|+++||+|.+.+|.++..+++|||+|+++++++|||||.....+..+.+.+.+...+.+|++|++||.|+
T Consensus 2 m~~~~~~~~~v~~~v~~v~g~~p~p~~~~~~n~~li~~~~~~ilID~G~~~~~~~~~~l~~~l~~~~~~i~~Ii~TH~H~ 81 (289)
T 4ad9_A 2 MAAVLQRVERLSNRVVRVLGCNPGPMTLQGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHR 81 (289)
T ss_dssp CCCCCCSEEECSSSEEEEECSCCBTTTBTCCEEEEECSSSSEEEECCCSTTCHHHHHHHHHHHHHTTCCEEEEECSCSSH
T ss_pred CcccCcchhccCCCeEEEeCCCCCCCcCCceEEEEEecCCceEEEeCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCCC
Confidence 77789999999999999999999999999999999999999999999976555566777888887788999999999999
Q ss_pred cccCChHHHHhhcCCC-cceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCC
Q psy1547 81 DHVGGLKDIFEHINPD-SATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEE 159 (216)
Q Consensus 81 DH~gg~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~ 159 (216)
||+||+..+.++++.. .++++.++.......... ........+++|+++.+|+.+++++++|||++|++++++++.
T Consensus 82 DH~gg~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~gg~~~~~~~~pGHt~~~~~~~~~~~ 158 (289)
T 4ad9_A 82 DHSGGIGDICKSINNDTTYCIKKLPRNPQREEIIG---NGEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLEEE 158 (289)
T ss_dssp HHHTTHHHHHHHSCCSSCCCEEECCCSSCCCCCBT---TTTBCEEECCTTCEEEETTEEEEEEECCSSSTTCEEEEETTT
T ss_pred cccccHHHHHHhhccCCCceEEecCCCcchhhhcc---CCCCceEEcCCCCEEEeCCeEEEEEECCCCCCCCEEEEEcCC
Confidence 9999999999987432 267777654432211111 123457889999999999999999999999999999999999
Q ss_pred cEEEEcceecCCCccccccHHHHHHHHHHHHcCCCCeEEcCCCccccC
Q psy1547 160 NVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPDIIYPAHGPVVEV 207 (216)
Q Consensus 160 ~vl~~GD~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~v~pgHg~~~~~ 207 (216)
++||+||+++......+.+..+|+++++++.++++++++||||+++.+
T Consensus 159 ~~lftGD~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~v~pgHg~~~~~ 206 (289)
T 4ad9_A 159 NAIFSGDCILGEGTTVFEDLYDYMNSLKELLKIKADIIYPGHGPVIHN 206 (289)
T ss_dssp TEEEEETSSCSSSCCCCSCHHHHHHHHHHHHHHTCSEEEESSSSCBSC
T ss_pred CEEEEecccCCCCCcCcCCHHHHHHHHHHHHcCCCCEEEeCCCChhcC
Confidence 999999998888777888999999999999999999999999999876
No 2
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=5.8e-34 Score=228.55 Aligned_cols=192 Identities=26% Similarity=0.333 Sum_probs=149.6
Q ss_pred cccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCC---CccEEEecccCccccCC
Q psy1547 9 SQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESI---SLEHIVLSHWHNDHVGG 85 (216)
Q Consensus 9 ~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~---~i~~v~~TH~H~DH~gg 85 (216)
++|++|||++....| .+...+|||+|+++++++|||||.+.. ...+.+.+.+.+.+. +|++|++||.|+||+||
T Consensus 2 ~~v~~~v~~i~~~~p--~~~~~~n~~li~~~~~~ilID~G~~~~-~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg 78 (317)
T 2zo4_A 2 KALLPGLYLLPVPIP--YPLKTVNLYLLQGAGEVALVDTALGTR-AARGALELHLAELGLCFQDVKTILLTHHHPDHYGL 78 (317)
T ss_dssp -CCBTTEEEEEEECS--STTCEEEEEEEEETTEEEEECCCCSSH-HHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTT
T ss_pred eeccCCeEEEEecCC--CCCCcEEEEEEEcCCceEEEECCCCCH-HHHHHHHHHHHHcCCChhhcCEEEEcCCCCccccc
Confidence 689999999986544 344579999999999999999998752 223445555655553 69999999999999999
Q ss_pred hHHHHhhcCCCcceEeccCCCCccccc------------------ccC-----------------CCCCCCceeecCCCC
Q psy1547 86 LKDIFEHINPDSATIWKFKGTEKDEAQ------------------ATD-----------------FVPENKTVQTLTDGQ 130 (216)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~-----------------~~~~~~~~~~~~~~~ 130 (216)
+..+.++ . +++++++........ .+. ..........+++|+
T Consensus 79 ~~~l~~~-~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 154 (317)
T 2zo4_A 79 SGFFEGL-G---ARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGE 154 (317)
T ss_dssp HHHHHHT-T---CEEEEEGGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTC
T ss_pred HHHHHhC-C---CEEEEcHHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCC
Confidence 9999876 3 688877654332110 000 011123567889999
Q ss_pred eEEECCeeEEEEeCCCCCCCceEEEECCCcEEEEcceecCCCcc--------ccccHHHHHHHHHHHHcCCCCeEEcCCC
Q psy1547 131 LLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTT--------VFSDLISYIESLRRIRSLKPDIIYPAHG 202 (216)
Q Consensus 131 ~~~~g~~~i~~~~~pgHt~~~~~~~~~~~~vl~~GD~~~~~~~~--------~~~~~~~~~~~l~~l~~~~~~~v~pgHg 202 (216)
++.+|+.+++++++||||+|++++++++.++||+||+++....+ ...+..+|++|++++.++++++++||||
T Consensus 155 ~l~~gg~~~~~i~tpGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~v~pgHg 234 (317)
T 2zo4_A 155 ALEVAGKRLRVLWTPGHADGHAAFYLEEEGVLLAGDALLEKVSPNVGLWAYTRENPLKDFLRSLDRLADLGARVAYAGHF 234 (317)
T ss_dssp EEEETTEEEEEEECCSSSTTCEEEEETTTTEEEEETSCCSSSCCCCCCCTTSCSCHHHHHHHHHHHHHTSCCSEEEESSS
T ss_pred EEEeCCceEEEEECCCCCcccEEEEeCCCCEEEECCEecCCCCCCCcccCCCCCchHHHHHHHHHHHhcCCCCEEECCCC
Confidence 99999999999999999999999999999999999998765322 1257889999999999999999999999
Q ss_pred ccccC
Q psy1547 203 PVVEV 207 (216)
Q Consensus 203 ~~~~~ 207 (216)
.++.+
T Consensus 235 ~~~~~ 239 (317)
T 2zo4_A 235 GPIAD 239 (317)
T ss_dssp SCBSC
T ss_pred CccCC
Confidence 99876
No 3
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=100.00 E-value=6.8e-33 Score=211.19 Aligned_cols=193 Identities=16% Similarity=0.205 Sum_probs=149.5
Q ss_pred Cccc-cccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhh-CCCCccEEEecccCccccC
Q psy1547 7 NVSQ-LSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNK-ESISLEHIVLSHWHNDHVG 84 (216)
Q Consensus 7 ~~~~-v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~-~~~~i~~v~~TH~H~DH~g 84 (216)
++++ |++++|.+.+..+.......+|||+|+++++.+|||||.... ..+.+.+.+.. .+.+|++|++||.|+||++
T Consensus 6 ~~~~~l~~~v~~~~~~~~~~~~~~~~n~~li~~~~~~iLiD~G~~~~--~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~g 83 (219)
T 3l6n_A 6 VIEPPIKNNLHIYKTFGVFGGKEYSANSMYLVTKKGVVLFDVPWEKV--QYQSLMDTIKKRHNLPVVAVFATHSHDDRAG 83 (219)
T ss_dssp EECCCBTTTEEEEEEEEEETTEEEEEEEEEEEETTEEEEESCCSSGG--GHHHHHHHHHHHHSCCEEEEECSSSSTTTTC
T ss_pred ceEeeecCCEEEEEeccccCCccccceEEEEEeCCEEEEEeCCCChH--HHHHHHHHHHHhcCCceeEEEecCCCccccc
Confidence 6788 999999998653322223357999999999999999997632 23445555554 3568999999999999999
Q ss_pred ChHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEe-CCCCCCCceEEEECCCcEEE
Q psy1547 85 GLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIH-TPGHTTDHIVLKLEEENVVF 163 (216)
Q Consensus 85 g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~-~pgHt~~~~~~~~~~~~vl~ 163 (216)
|+..+.+ + .+++++++.......... ...+...+++++.+.+|+.++++++ +|||++|++++++++.+++|
T Consensus 84 g~~~l~~-~---~~~v~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~~~~~~lf 155 (219)
T 3l6n_A 84 DLSFFNN-K---GIKTYATAKTNEFLKKDG----KATSTEIIKTGKPYRIGGEEFVVDFLGEGHTADNVVVWFPKYNVLD 155 (219)
T ss_dssp CTHHHHH-T---TCEEEECHHHHHHHHHTT----CCCCSEECCTTSEEEETTEEEEEECCCCSSSSSCCEEEETTTTEEE
T ss_pred CHHHHHh-C---CCEEEEcHHHHHHHHhcC----CCCCcEecCCCCEEEECCEEEEEEeCCCCCCCCCEEEEECCCCEEE
Confidence 9999986 3 378888765543322211 1234678899999999999999999 79999999999999999999
Q ss_pred EcceecCCCcc-----ccccHHHHHHHHHHHHcC--CCCeEEcCCCccccCcc
Q psy1547 164 SGDTILGEGTT-----VFSDLISYIESLRRIRSL--KPDIIYPAHGPVVEVGL 209 (216)
Q Consensus 164 ~GD~~~~~~~~-----~~~~~~~~~~~l~~l~~~--~~~~v~pgHg~~~~~~~ 209 (216)
+||+++....+ ...+..+|+++++++.++ +.++++||||++.....
T Consensus 156 ~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~~~~ 208 (219)
T 3l6n_A 156 GGCLVKSNSATDLGYIKEANVEQWPKTINKLKAKYSKATLIIPGHDEWKGGGH 208 (219)
T ss_dssp EETTSCCTTCSSCCCCTTCCTTTHHHHHHHHHHHCTTCSEEEESBSCCTTSCH
T ss_pred ECCeeeccccccccccCccCHHHHHHHHHHHHHhCCCCCEEECCCCCCCCHHH
Confidence 99988754332 236789999999999885 56799999999876543
No 4
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=100.00 E-value=1.3e-32 Score=210.29 Aligned_cols=189 Identities=19% Similarity=0.219 Sum_probs=144.9
Q ss_pred CccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhC-CCCccEEEecccCccccCC
Q psy1547 7 NVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKE-SISLEHIVLSHWHNDHVGG 85 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~-~~~i~~v~~TH~H~DH~gg 85 (216)
++++|+++||++.+..+.+....+.|||+|+++++.+|||||.+.. ..+.+.+.+.+. +.+|++|++||.|+||++|
T Consensus 3 ~~~~i~~~v~~i~~~~~~~~~~~~~n~~li~~~~~~iLiD~G~~~~--~~~~~~~~l~~~~g~~i~~vi~TH~H~DH~gg 80 (223)
T 1m2x_A 3 KIEKLKDNLYVYTTYNTFNGTKYAANAVYLVTDKGVVVIDCPWGED--KFKSFTDEIYKKHGKKVIMNIATHSHDDRAGG 80 (223)
T ss_dssp EEEEEETTEEEEEEEEEETTEEEEEEEEEEEETTEEEEESCCSSGG--GHHHHHHHHHHHHCCCEEEEECSSSSTTTTTT
T ss_pred eEEEeeCCEEEEEEeccCCCCcccccEEEEEeCCEEEEEeCCCChh--HHHHHHHHHHHHhCCCeEEEEeccCCccccCc
Confidence 4678999999997543322222358999999999999999998632 123444455544 6789999999999999999
Q ss_pred hHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEe-CCCCCCCceEEEECCCcEEEE
Q psy1547 86 LKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIH-TPGHTTDHIVLKLEEENVVFS 164 (216)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~-~pgHt~~~~~~~~~~~~vl~~ 164 (216)
+..+.+ . .+++++++........... ..+...+++++.+.+|+.++++++ +|||++|++++++++.++||+
T Consensus 81 ~~~~~~-~---~~~v~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~~~~~~~~~~~~~lf~ 152 (223)
T 1m2x_A 81 LEYFGK-I---GAKTYSTKMTDSILAKENK----PRAQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWFPKEKVLVG 152 (223)
T ss_dssp HHHHHH-T---TCEEEEEHHHHHHHHHTTC----CCCSEEESSCEEEEETTEEEEEECCCSSSSSSCCEEEETTTTEEEE
T ss_pred hhhHhh-C---CCeEEEcHHHHHHHHhcCc----cCCceecCCCceEEECCEEEEEEecCCCCCCCCEEEEECCCCEEEE
Confidence 999987 2 3788887654432221111 123467889999999999999996 999999999999998999999
Q ss_pred cceecCCCc-----cccccHHHHHHHHHHHHcC--CCCeEEcCCCccc
Q psy1547 165 GDTILGEGT-----TVFSDLISYIESLRRIRSL--KPDIIYPAHGPVV 205 (216)
Q Consensus 165 GD~~~~~~~-----~~~~~~~~~~~~l~~l~~~--~~~~v~pgHg~~~ 205 (216)
||+++.... ....+..+|+++++++.++ +.+.++||||.+.
T Consensus 153 GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~i~pgHg~~~ 200 (223)
T 1m2x_A 153 GCIIKSADSKDLGYIGEAYVNDWTQSVHNIQQKFSGAQYVVAGHDDWK 200 (223)
T ss_dssp ETTSCCTTCSSCCCCTTCCHHHHHHHHHHHHHHTTTCSEEEESBSCCC
T ss_pred ecccccCcccccccCCCCCHHHHHHHHHHHHHhCCCCCEEEeCCCCcC
Confidence 997765422 1226899999999999987 6789999999988
No 5
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.98 E-value=3.9e-33 Score=219.07 Aligned_cols=192 Identities=17% Similarity=0.216 Sum_probs=137.5
Q ss_pred ccccccceEEeccCC-CCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhh-CCCCccEEEecccCccccCC
Q psy1547 8 VSQLSSRVIRVLGMN-PGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNK-ESISLEHIVLSHWHNDHVGG 85 (216)
Q Consensus 8 ~~~v~~~v~~v~~~~-~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~-~~~~i~~v~~TH~H~DH~gg 85 (216)
+++|++|||...+.. ..+++..++|||+|.++++++|||||.+ .+..+.+.+.+.+ .+++|++|++||.|+||+||
T Consensus 51 ~~~~~~~v~~~~~~~~~~~~G~~~~N~ylv~~~~~~ilIDtg~~--~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg 128 (270)
T 4eyb_A 51 FRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDGGRVLVVDTAWT--DDQTAQILNWIKQEINLPVALAVVTHAHQDKMGG 128 (270)
T ss_dssp EEEEETTEEEEEEEEEETTTEEEEEEEEEEEETTEEEEESCCSS--HHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTT
T ss_pred EEEecCCeEEEEeecccCCCCccceEEEEEEECCEEEEEeCCCC--HHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCc
Confidence 678999999875431 2233333589999999999999999976 3334555555544 46789999999999999999
Q ss_pred hHHHHhhcCCCcceEeccCCCCcccccccCCCCC----CCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCCcE
Q psy1547 86 LKDIFEHINPDSATIWKFKGTEKDEAQATDFVPE----NKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENV 161 (216)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~~v 161 (216)
+.+|+++ .+++++++.........+..... ......++++..+..|+.. .++.+||||+|++++++++.++
T Consensus 129 ~~~l~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~pgHT~g~~~~~~~~~~v 203 (270)
T 4eyb_A 129 MDALHAA----GIATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLK-VFYPGPGHTSDNITVGIDGTDI 203 (270)
T ss_dssp HHHHHHT----TCEEEEEHHHHHHGGGGTCCCCSEEECBCTTSBBCGGGSTTCTTEE-EECCCSSSSSSCCEEEETTSSE
T ss_pred HHHHHHC----CCeEEECHHHHHHHHhcCccccccccCCCCceeecCceeeecCcee-EEecccccCCCCEEEEecCCcE
Confidence 9999876 37888876443322221111111 1222344455555555533 3456699999999999999999
Q ss_pred EEEcceecCCCccc-----cccHHHHHHHHHHHHcC--CCCeEEcCCCcccc
Q psy1547 162 VFSGDTILGEGTTV-----FSDLISYIESLRRIRSL--KPDIIYPAHGPVVE 206 (216)
Q Consensus 162 l~~GD~~~~~~~~~-----~~~~~~~~~~l~~l~~~--~~~~v~pgHg~~~~ 206 (216)
||+||+++....+. ..+..+|+++|+++++. +.++++||||++..
T Consensus 204 LfsGD~l~~~~~~~~~~~~~~~~~~~~~Sl~~l~~~~~d~~~v~PGHG~p~~ 255 (270)
T 4eyb_A 204 AFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPKASMIVMSHSAPDS 255 (270)
T ss_dssp EECTTTCCCTTCSCCCCCTTCCTTTHHHHHHHHHHHSTTCCEEECSSSCCBC
T ss_pred EEEeCeecCCCCCCcCCCCCCCHHHHHHHHHHHHhhCCCCcEEEcCCCCCCC
Confidence 99999988665433 25788999999999875 45699999999864
No 6
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.98 E-value=1.8e-32 Score=210.55 Aligned_cols=198 Identities=18% Similarity=0.228 Sum_probs=145.0
Q ss_pred CCCCCCCccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhh-CCCCccEEEecccC
Q psy1547 1 MSAKIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNK-ESISLEHIVLSHWH 79 (216)
Q Consensus 1 m~~~~~~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~-~~~~i~~v~~TH~H 79 (216)
|+.+...+++|++++|.+.+.. ..+.|||+|+++++++|||||.+. ...+.+.+.+.. .+.+|++|++||.|
T Consensus 1 ~~~~~~~~~~l~~~v~~i~~~~-----~~~~n~~li~~~~~~iLiD~G~~~--~~~~~~~~~l~~~~~~~i~~ii~TH~H 73 (233)
T 3q6v_A 1 MSEKNLTLTHFKGPLYIVEDKE-----YVQENSMVYIGTDGITIIGATWTP--ETAETLYKEIRKVSPLPINEVINTNYH 73 (233)
T ss_dssp ----CEEEEEEETTEEEEEECS-----SSCEEEEEEECSSCEEEESCCSSH--HHHHHHHHHHHHHCCCCEEEEECSSSS
T ss_pred CCCCcceeEEecCCEEEEeCCC-----cCCCcEEEEEeCCeEEEEECCCCH--HHHHHHHHHHHHhcCCCcEEEEECCCC
Confidence 4555567889999999997531 236899999999999999999863 223444455544 25689999999999
Q ss_pred ccccCChHHHHhhcCCCcceEeccCCCCcccccc-----------cCC---CCCCCceeecCCCCeEEECCeeEEEEeC-
Q psy1547 80 NDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQA-----------TDF---VPENKTVQTLTDGQLLKVEGATLRVIHT- 144 (216)
Q Consensus 80 ~DH~gg~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----------~~~---~~~~~~~~~~~~~~~~~~g~~~i~~~~~- 144 (216)
+||+||+..|.+ . .+++++++......... ... .....+...++++..+.. .+++++++
T Consensus 74 ~DH~gg~~~~~~-~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~v~~~~ 147 (233)
T 3q6v_A 74 TDRAGGNAYWKT-L---GAKIVATQMTYDLQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVFPGDFNLQN--GSIRAMYLG 147 (233)
T ss_dssp HHHHTTHHHHHH-T---TCEEEEEHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCSEEESSCEEETT--TTEEEECCC
T ss_pred hhhhChHHHHhh-C---CCEEEEcHHHHHHHHhhhHHHHHHHhccccccccccccCCCEEeCCCeEEcC--ceEEEEECC
Confidence 999999999984 2 27888876443221110 001 111233456666655543 36889999
Q ss_pred CCCCCCceEEEECCCcEEEEcceecCCCcccc--ccHHHHHHHHHHHHcC------CCCeEEcCCCccccCccccc
Q psy1547 145 PGHTTDHIVLKLEEENVVFSGDTILGEGTTVF--SDLISYIESLRRIRSL------KPDIIYPAHGPVVEVGLSFS 212 (216)
Q Consensus 145 pgHt~~~~~~~~~~~~vl~~GD~~~~~~~~~~--~~~~~~~~~l~~l~~~------~~~~v~pgHg~~~~~~~~~~ 212 (216)
||||+|++++++++.++|| ||.++....+.+ .+..+|.+++++++++ ++++++||||.++.+.+.+.
T Consensus 148 pGHt~g~~~~~~~~~~~lf-gD~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~~~~~~~i~pgHg~~~~~~~~i~ 222 (233)
T 3q6v_A 148 EAHTKDGIFVYFPAERVLY-GNCILKENLGNMSFANRTEYPKTLEKLKGLIEQGELKVDSIIAGHDTPIHDVGLID 222 (233)
T ss_dssp CSSSSSCCEEEETTTTEEE-CTTTSCSSCCCCTTCCTTHHHHHHHHHHHHHHTTSSCCSEEECSSSSSEECTHHHH
T ss_pred CCCCcCcEEEEeccCCEEE-CceeccccCCCCCcCCHHHHHHHHHHHHHhhhcccCCCeEEECCCCCccCCHHHHH
Confidence 9999999999999999999 998876644433 6789999999999998 89999999999998877654
No 7
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.98 E-value=2.6e-33 Score=216.88 Aligned_cols=193 Identities=18% Similarity=0.238 Sum_probs=144.5
Q ss_pred CccccccceEEeccCCCCcc-CCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhC-CCCccEEEecccCccccC
Q psy1547 7 NVSQLSSRVIRVLGMNPGPM-TLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKE-SISLEHIVLSHWHNDHVG 84 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~~-~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~-~~~i~~v~~TH~H~DH~g 84 (216)
++++|++++|++.+..+.+. +..++|||+|+++++.+|||||.. ....+.+.+.+.+. +.+|++|++||.|+||++
T Consensus 23 ~~~~i~~~v~~~~~~~~~~~~g~~~~n~~li~~~~~~iLID~G~~--~~~~~~l~~~l~~~~~~~i~~vi~TH~H~DH~g 100 (243)
T 4hl2_A 23 VFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDGGRVLVVDTAWT--DDQTAQILNWIKQEINLPVALAVVTHAHQDKMG 100 (243)
T ss_dssp EEEEEETTEEEEEEEEEETTTEEEEEEEEEEEETTEEEEESCCSS--HHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHT
T ss_pred EEEEeCCceEEEeeecccCCCCcccceEEEEEECCcEEEEECCCC--CccHHHHHHHHHHhhCCCeeEEEECCCCccccC
Confidence 46789999999976433222 234689999999999999999965 22345566666665 778999999999999999
Q ss_pred ChHHHHhhcCCCcceEeccCCCCcccccccCCCCC----CCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCCc
Q psy1547 85 GLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPE----NKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEEN 160 (216)
Q Consensus 85 g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~~ 160 (216)
|+..+.+. .+++++++............... ......+++++.+.+|+.++ ++++|||++|++++++++.+
T Consensus 101 g~~~l~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v-~~~~pGHt~g~~~~~~~~~~ 175 (243)
T 4hl2_A 101 GMDALHAA----GIATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLKV-FYPGPGHTSDNITVGIDGTD 175 (243)
T ss_dssp THHHHHHT----TCEEEEEHHHHHHGGGTTCCCCSEEECBCTTSBBCGGGSTTCTTEEE-ECCCSSSSTTCCEEEETTTT
T ss_pred CHHHHHhC----CCeEEECHHHHHHHhcccccccccccccccceEecCCCeEEECCEEE-EeCCCCCCcCCEEEEEcCCC
Confidence 99999875 37888876443322111111100 12244577889999999888 67899999999999999999
Q ss_pred EEEEcceecC---CC--ccccccHHHHHHHHHHHHc-C-CCCeEEcCCCcccc
Q psy1547 161 VVFSGDTILG---EG--TTVFSDLISYIESLRRIRS-L-KPDIIYPAHGPVVE 206 (216)
Q Consensus 161 vl~~GD~~~~---~~--~~~~~~~~~~~~~l~~l~~-~-~~~~v~pgHg~~~~ 206 (216)
+||+||+++. .. .....+..+|++++++++. + +.++++||||++..
T Consensus 176 ~lf~GD~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~~l~~~~~v~pgHg~~~~ 228 (243)
T 4hl2_A 176 IAFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPKASMIVMSHSAPDS 228 (243)
T ss_dssp EEECTTTCCCTTCSCCCCCTTCCTTTHHHHHHHHHHHSTTCCEEECSSSCCBC
T ss_pred EEEEcceeeeccCCCcCCCCCCCHHHHHHHHHHHHhhCCCceEEEeCCCCcCc
Confidence 9999999883 22 1224678999999999986 4 56699999999976
No 8
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.98 E-value=2.7e-32 Score=209.11 Aligned_cols=192 Identities=20% Similarity=0.274 Sum_probs=143.1
Q ss_pred CccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhC-CCCccEEEecccCccccCC
Q psy1547 7 NVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKE-SISLEHIVLSHWHNDHVGG 85 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~-~~~i~~v~~TH~H~DH~gg 85 (216)
++++|+++||.+.+..+........|||+|+++++.+|||||.... ..+.+.+.+.+. +.+|++|++||.|+||++|
T Consensus 17 ~~~~i~~~v~~~~~~~~~~~~~~~~n~~li~~~~~~iliD~G~~~~--~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg 94 (227)
T 1mqo_A 17 SISQLNKNVWVHTELGSFNGEAVPSNGLVLNTSKGLVLVDSSWDDK--LTKELIEMVEKKFQKRVTDVIITHAHADRIGG 94 (227)
T ss_dssp EEEEEETTEEEEEEEEEETTEEEEEEEEEEEETTEEEEESCCSSHH--HHHHHHHHHHHHHTSCEEEEECCCCSHHHHTT
T ss_pred EEEEecCCeEEEEeeecccCceecceEEEEEeCCeEEEEECCCChH--HHHHHHHHHHHhcCCCceEEEeCCCCchhccc
Confidence 4678999999986532111112247999999999999999998732 123344444443 5689999999999999999
Q ss_pred hHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEE-eCCCCCCCceEEEECCCcEEEE
Q psy1547 86 LKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVI-HTPGHTTDHIVLKLEEENVVFS 164 (216)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~-~~pgHt~~~~~~~~~~~~vl~~ 164 (216)
+..+.++ . +++++++.........+ .. .+...++.++.+.+|+.+++++ ++|||++|++++++++.++||+
T Consensus 95 ~~~l~~~-~---~~v~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~g~~~i~~~~~~pgHt~g~~~~~~~~~~~lf~ 166 (227)
T 1mqo_A 95 IKTLKER-G---IKAHSTALTAELAKKNG--YE--EPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLPQYNILVG 166 (227)
T ss_dssp HHHHHHH-T---CEEECBHHHHHHHHHTT--CC--CCCCCBCSEEEEEETTEEEEEECCCCSSSSSCCEEEETTTTEEEE
T ss_pred hHHHhhC-C---cEEEeccchHHHHHhcC--CC--CCccccCCCCeeeECCEEEEEEecCCCCCCCCEEEEECCCCEEEE
Confidence 9999876 2 67887764433221111 11 2345677888999999999988 5899999999999999999999
Q ss_pred cceecCCCcc-----ccccHHHHHHHHHHHHcC--CCCeEEcCCCccccCc
Q psy1547 165 GDTILGEGTT-----VFSDLISYIESLRRIRSL--KPDIIYPAHGPVVEVG 208 (216)
Q Consensus 165 GD~~~~~~~~-----~~~~~~~~~~~l~~l~~~--~~~~v~pgHg~~~~~~ 208 (216)
||+++....+ ...+..+|++++++++++ +++.++||||++.+..
T Consensus 167 GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~~~ 217 (227)
T 1mqo_A 167 GCLVKSTSAKDLGNVADAYVNEWSTSIENVLKRYRNINAVVPGHGEVGDKG 217 (227)
T ss_dssp ETTSCCTTCCSCCCCTTCCHHHHHHHHHHHHHHCCSCSEEEESSSCCBCTH
T ss_pred eeeeeccCccccCcCCCCCHHHHHHHHHHHHHhcCCCCEEEcCCCCcccch
Confidence 9987753221 235788999999999886 7789999999998763
No 9
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.98 E-value=3.1e-32 Score=208.50 Aligned_cols=191 Identities=18% Similarity=0.240 Sum_probs=142.4
Q ss_pred CccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhC-CCCccEEEecccCccccCC
Q psy1547 7 NVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKE-SISLEHIVLSHWHNDHVGG 85 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~-~~~i~~v~~TH~H~DH~gg 85 (216)
++++|++++|.+.+.. ..+.|||+|+++++++|||||.+ ....+.+.+.+.+. +.+|++|++||.|+||+||
T Consensus 4 ~~~~l~~~v~~~~~~~-----~~~~n~~li~~~~~~iLiD~G~~--~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg 76 (227)
T 3iog_A 4 SLTQVSGPVYVVEDNY-----YVQENSMVYFGAKGVTVVGATWT--PDTARELHKLIKRVSRKPVLEVINTNYHTDRAGG 76 (227)
T ss_dssp EEEEEETTEEEEEECS-----SSCEEEEEEECSSCEEEESCCSS--HHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTT
T ss_pred ccEEecCCEEEEECCC-----cccCcEEEEEeCCeEEEEECCCC--hHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcCh
Confidence 6789999999997431 23689999999999999999975 22345566666653 4589999999999999999
Q ss_pred hHHHHhhcCCCcceEeccCCCCccccc----------cc-CCC---CCCCceeecCCCCeEEECCeeEEEEeC-CCCCCC
Q psy1547 86 LKDIFEHINPDSATIWKFKGTEKDEAQ----------AT-DFV---PENKTVQTLTDGQLLKVEGATLRVIHT-PGHTTD 150 (216)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~----------~~-~~~---~~~~~~~~~~~~~~~~~g~~~i~~~~~-pgHt~~ 150 (216)
+..+.+ . .+++++++........ .+ ... ....+...+ ++ .+.+++.+++++++ ||||+|
T Consensus 77 ~~~l~~-~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~l~~~~~~~~~~~pGHt~g 150 (227)
T 3iog_A 77 NAYWKS-I---GAKVVSTRQTRDLMKSDWAEIVAFTRKGLPEYPDLPLVLPNVVH-DG-DFTLQEGKVRAFYAGPAHTPD 150 (227)
T ss_dssp HHHHHH-T---TCEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSCCCCCCCCSEEE-SS-CEEETTTTEEEECCCCSSSSS
T ss_pred HHHHhh-C---CCeEEECHHHHHHHHHhhHHHHHHhhcCCCCCCCccccCCCEee-cC-eEEEcCcEEEEEecCCCCCCC
Confidence 999976 2 2788877644322110 00 000 111222333 33 48888888999997 999999
Q ss_pred ceEEEECCCcEEEEcceecCCCccc--cccHHHHHHHHHHHH--cCCCCeEEcCCCccccCcccc
Q psy1547 151 HIVLKLEEENVVFSGDTILGEGTTV--FSDLISYIESLRRIR--SLKPDIIYPAHGPVVEVGLSF 211 (216)
Q Consensus 151 ~~~~~~~~~~vl~~GD~~~~~~~~~--~~~~~~~~~~l~~l~--~~~~~~v~pgHg~~~~~~~~~ 211 (216)
+++++++++++|| ||.++....+. ..+..+|++++++++ .+++++++||||.++.+.+.+
T Consensus 151 ~~~~~~~~~~~lf-gd~l~~~~~~~~~~~~~~~~~~sl~~l~~~~l~~~~i~pgHg~~~~~~~~i 214 (227)
T 3iog_A 151 GIFVYFPDEQVLY-GGCILKEKLGNLSFADVKAYPQTLERLKAMKLPIKTVIGGHDSPLHGPELI 214 (227)
T ss_dssp CCEEEETTTTEEE-CGGGSCSSCCCCTTCCTTHHHHHHHHHHHTCCCCSEEECSSSCCEECTHHH
T ss_pred cEEEEecCCCEEE-cccccccCCCCcCcCCHHHHHHHHHHHHhccCCCCEEEeCCCCCcCCHHHH
Confidence 9999999999999 88777654333 368899999999999 678899999999998876544
No 10
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.98 E-value=4.6e-32 Score=212.13 Aligned_cols=193 Identities=14% Similarity=0.222 Sum_probs=144.1
Q ss_pred CccccccceEEeccCCCCc------c---CCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhC--CCCccEEEe
Q psy1547 7 NVSQLSSRVIRVLGMNPGP------M---TLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKE--SISLEHIVL 75 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~------~---~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~--~~~i~~v~~ 75 (216)
++.+|++|||+|.+..+.. . ....+|||+|.+ ++.+|||||... ..+.+.+.+.+. ..+|++|++
T Consensus 10 ~~~~i~~~vy~v~~~~~~~~~f~~~~~~~~g~~~N~yli~~-~~~iLID~G~~~---~~~~~~~~l~~~~~~~~i~~Iil 85 (262)
T 3hnn_A 10 QVLPIATNTKVLRARSWSRLRFEIEYALERGTTSNSYVIEG-DKTAIIDPPVES---FMKIYLEALQQTVNLKKLDYVIL 85 (262)
T ss_dssp EEEEEETTEEEEEEEESSCSSSSGGGTTCCCEEEEEEEEES-SSEEEECCCCHH---HHHHHHHHHHHHSCGGGEEEEEC
T ss_pred eeEeecCCeEEEEEeeCCccceeeeeccCCCcEEEEEEEEC-CCEEEEECCCcc---hHHHHHHHHHHhCChhhCCEEEE
Confidence 4678999999997654321 0 112468999998 789999999752 123333333331 357999999
Q ss_pred cccCccccCChHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEEC-CeeEEEEeCCC-CCCCceE
Q psy1547 76 SHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVE-GATLRVIHTPG-HTTDHIV 153 (216)
Q Consensus 76 TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~i~~~~~pg-Ht~~~~~ 153 (216)
||.|+||+||+..+.++++. +++++++........... ....+...+++|+++.+| +.+++++++|| |++|+++
T Consensus 86 TH~H~DH~gg~~~l~~~~~~--~~v~~~~~~~~~l~~~~~--~~~~~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~g~~~ 161 (262)
T 3hnn_A 86 GHFSPNRIPTFKALLELAPQ--ITFVCSLPAAGDLRAAFP--DDNLNILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLC 161 (262)
T ss_dssp SSCCGGGHHHHHHHHHHCTT--CEEEECHHHHHHHHHHSS--SSCCEEEECCSSCEEECSTTCEEEEEECCCSSCTTCEE
T ss_pred CCCCcchhchHHHHHHHCCC--CEEEECHHHHHHHHHHhC--CCCCceEEeCCCCEEEcCCCcEEEEEECCCCCCCCeeE
Confidence 99999999999999998763 788887654432211111 113467889999999998 89999999999 9999999
Q ss_pred EEECCCcEEEEcceecCCCcc--c-------------------c-ccHHHHHHHHHHHHcCCCCeEEcCCCccccC
Q psy1547 154 LKLEEENVVFSGDTILGEGTT--V-------------------F-SDLISYIESLRRIRSLKPDIIYPAHGPVVEV 207 (216)
Q Consensus 154 ~~~~~~~vl~~GD~~~~~~~~--~-------------------~-~~~~~~~~~l~~l~~~~~~~v~pgHg~~~~~ 207 (216)
++.++.++||+||++...... . . .+..+++++++++.++++++++||||+++++
T Consensus 162 ~~~~~~~~lfsGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~L~~~~i~PgHG~~~~~ 237 (262)
T 3hnn_A 162 TYDVQTQILYTDKIFGAHICGDDVFDDNWESFKEDQRYYFNCLMAPHAIHVEAALEKISDLQVRLYAVGHGPLVRT 237 (262)
T ss_dssp EEETTTTEEEEETTTCCCCCCSCCEESCGGGTHHHHHHHHHHHTGGGHHHHHHHHHHHTTSCCSEEEESSSSEEST
T ss_pred EEeCCCCEEEEeecCccccCchhcccccHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhCCCCCEEECCCCccccC
Confidence 999999999999984321110 0 0 2257889999999999999999999999875
No 11
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.97 E-value=2.9e-32 Score=209.57 Aligned_cols=191 Identities=21% Similarity=0.323 Sum_probs=144.9
Q ss_pred CccccccceEEeccCCCCcc-CCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhC-CCCccEEEecccCccccC
Q psy1547 7 NVSQLSSRVIRVLGMNPGPM-TLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKE-SISLEHIVLSHWHNDHVG 84 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~~-~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~-~~~i~~v~~TH~H~DH~g 84 (216)
++++|+++||++.+..+... +..+.|||+|+++++.+|||||.+. ...+.+.+.+.+. +.+|++|++||.|+||++
T Consensus 12 ~~~~i~~~v~~i~~~~~~~~~g~~~~n~~li~~~~~~iLiD~G~~~--~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~g 89 (232)
T 1a7t_A 12 SITQLSDKVYTYVSLAEIEGWGMVPSNGMIVINNHQAALLDTPIND--AQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIG 89 (232)
T ss_dssp EEEECSSSEEEEEEEEEETTTEEEEEEEEEEEETTEEEEESCCSSH--HHHHHHHHHHHHHHCCEEEEEECSSSSHHHHT
T ss_pred EEEEecCCeEEEEeccCCCCCccccceEEEEEeCCEEEEEeCCCCH--HHHHHHHHHHHHhcCCCeEEEEeCCCCccccC
Confidence 57789999999975432111 1224799999999999999999862 2234445555544 568999999999999999
Q ss_pred ChHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEe-CCCCCCCceEEEECCCcEEE
Q psy1547 85 GLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIH-TPGHTTDHIVLKLEEENVVF 163 (216)
Q Consensus 85 g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~-~pgHt~~~~~~~~~~~~vl~ 163 (216)
|+..+.+. .+++++++.........+ . ..+...+++++.+.+|+.++++++ +|||++|+++++++++++||
T Consensus 90 g~~~~~~~----~~~v~~~~~~~~~~~~~~--~--~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~~~~~~lf 161 (232)
T 1a7t_A 90 GLGYLQRK----GVQSYANQMTIDLAKEKG--L--PVPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLPTENILF 161 (232)
T ss_dssp THHHHHHT----TCEEEEEHHHHHHHHHHT--C--CCCSEEESSEEEEEETTEEEEEECCCCSSSTTCCEEEETTTTEEE
T ss_pred CHHHHHhC----CCeEEEcHHHHHHHHhcC--C--CCCceecCCCCEEEECCeEEEEEeCCCCCCCCCEEEEECCCCEEE
Confidence 99999872 378888765433222111 1 123567889999999999999997 99999999999999999999
Q ss_pred EcceecCC---Ccc--ccccHHHHHHHHHHHHcC--CCCeEEcCCCccccC
Q psy1547 164 SGDTILGE---GTT--VFSDLISYIESLRRIRSL--KPDIIYPAHGPVVEV 207 (216)
Q Consensus 164 ~GD~~~~~---~~~--~~~~~~~~~~~l~~l~~~--~~~~v~pgHg~~~~~ 207 (216)
+||+++.. ... ...+..+|++++++++++ +.+.++||||.+...
T Consensus 162 ~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~~ 212 (232)
T 1a7t_A 162 GGCMLKDNQTTSIGNISDADVTAWPKTLDKVKAKFPSARYVVPGHGNYGGT 212 (232)
T ss_dssp EETTSCCTTCCSCCCCTTCCTTTHHHHHHHHHHHCTTCSEEEESSSCCBCT
T ss_pred EcCcccccCCcccccCCCCCHHHHHHHHHHHHhhCCCCCEEECCCCCcccH
Confidence 99988742 111 226788999999999987 778999999998853
No 12
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.97 E-value=1.1e-31 Score=210.00 Aligned_cols=189 Identities=17% Similarity=0.255 Sum_probs=143.6
Q ss_pred CccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCC---CccEEEecccCcccc
Q psy1547 7 NVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESI---SLEHIVLSHWHNDHV 83 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~---~i~~v~~TH~H~DH~ 83 (216)
++.+|.+++|.+.. .+.|||+|+++++.+|||||.... .+.+.+.+.+.+. +|++|++||.|+||+
T Consensus 9 ~~~~i~~~v~~i~~--------~~~n~~li~~~~~~iLID~G~~~~---~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~ 77 (263)
T 1k07_A 9 PPFRIAGNLYYVGT--------DDLASYLIVTPRGNILINSDLEAN---VPMIKASIKKLGFKFSDTKILLISHAHFDHA 77 (263)
T ss_dssp CCEEEETTEEECCB--------SSBCCEEEEETTEEEEECCCCGGG---HHHHHHHHHHTTCCGGGEEEEECSSSSHHHH
T ss_pred CCeEEECCEEEECC--------CCeEEEEEEeCCceEEEECCCccc---HHHHHHHHHHcCCCHHHCcEEEeCCCCcccc
Confidence 56789999999953 258999999999999999998632 2445555555554 599999999999999
Q ss_pred CChHHHHhhcCCCcceEeccCCCCccccc-------ccC----CCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCce
Q psy1547 84 GGLKDIFEHINPDSATIWKFKGTEKDEAQ-------ATD----FVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHI 152 (216)
Q Consensus 84 gg~~~~~~~~~~~~~~i~~~~~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~ 152 (216)
+|+..+.+.+. +++++++........ ++. ..........+++++.+.+|+.+++++++||||+|++
T Consensus 78 gg~~~l~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~i~~pGHt~g~~ 154 (263)
T 1k07_A 78 AGSELIKQQTK---AKYMVMDEDVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELGGTVLTAHLTPGHTRGCT 154 (263)
T ss_dssp TTHHHHHHHHC---CEEEEEHHHHHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCE
T ss_pred ccHHHHHHhcC---CEEEEcHHHHHHHhcccccccccCccccccCCCCCcceEeCCCCEEEECCeEEEEEECCCCCCCcE
Confidence 99999988754 678876533221110 111 1112234678899999999999999999999999999
Q ss_pred EEEECC---C---cEEEEcceecCCCcc------ccccHHHHHHHHHHHHcCCCCeEEcCCCccccCcc
Q psy1547 153 VLKLEE---E---NVVFSGDTILGEGTT------VFSDLISYIESLRRIRSLKPDIIYPAHGPVVEVGL 209 (216)
Q Consensus 153 ~~~~~~---~---~vl~~GD~~~~~~~~------~~~~~~~~~~~l~~l~~~~~~~v~pgHg~~~~~~~ 209 (216)
+++++. + ++||+||+....... ...+..+|+++++++.++++++++||||.++...+
T Consensus 155 ~~~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~i~pgHg~~~~~~~ 223 (263)
T 1k07_A 155 TWTMKLKDHGKQYQAVIIGSIGVNPGYKLVDNITYPKIAEDYKHSIKVLESMRCDIFLGSHAGMFDLKN 223 (263)
T ss_dssp EEEEEEEETTEEEEEEEECCCCCCTTCCCSSCSSCTTHHHHHHHHHHHHHTBCCSEEEESBHHHHTHHH
T ss_pred EEEEecccCCceeEEEEECCcccCCCccccCCCcCcccHHHHHHHHHHHHccCCCEEEcCCCcccchHH
Confidence 999974 3 699999986522211 22567899999999999999999999999876443
No 13
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.97 E-value=1.3e-31 Score=212.71 Aligned_cols=189 Identities=20% Similarity=0.283 Sum_probs=146.0
Q ss_pred CccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCC---CccEEEecccCcccc
Q psy1547 7 NVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESI---SLEHIVLSHWHNDHV 83 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~---~i~~v~~TH~H~DH~ 83 (216)
++.++.+++|.+.. .+.|||+|+++++.+|||||.... .+.+.+.+.+.+. +|++|++||.|+||+
T Consensus 39 ~~~~i~~~v~~~~~--------~~~n~~li~~~~~~iLID~G~~~~---~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~ 107 (294)
T 3m8t_A 39 EPFQLIDNIYYVGT--------DGIAVYVIKTSQGLILMDTAMPQS---TGMIKDNIAKLGFKVADIKLILNTHAHLDHT 107 (294)
T ss_dssp CCEEEETTEEECCC--------SSSCCEEEEETTEEEEECCCCGGG---HHHHHHHHHHTTCCGGGEEEEECSCCCHHHH
T ss_pred CCEEEeCCEEEeCC--------CCeEEEEEEECCceEEEECCCchh---HHHHHHHHHHcCCCHHHCcEEEECCCCcccc
Confidence 46689999999842 358999999999999999998532 3445555555554 599999999999999
Q ss_pred CChHHHHhhcCCCcceEeccCCCCcccccc---------cCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEE
Q psy1547 84 GGLKDIFEHINPDSATIWKFKGTEKDEAQA---------TDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVL 154 (216)
Q Consensus 84 gg~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~ 154 (216)
+|+..+.+.+. ++++.++......... ............+++|+.+.+|+.+++++++|||++|++++
T Consensus 108 gg~~~l~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~ 184 (294)
T 3m8t_A 108 GGFAEIKKETG---AQLVAGERDKPLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSW 184 (294)
T ss_dssp TTHHHHHHHHC---CEEEEEGGGHHHHHHTCBTTBTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEE
T ss_pred ccHHHHhhccC---CEEEEChHHHHHHhcccccCccccccCCCCCCCCceEeCCCCEEEeCCEEEEEEeCCCCCccCEEE
Confidence 99999988754 6888876544322111 11122223457889999999999999999999999999999
Q ss_pred EEC--CC----cEEEEcceecCCCc-----cccccHHHHHHHHHHHHcCCCCeEEcCCCccccCcc
Q psy1547 155 KLE--EE----NVVFSGDTILGEGT-----TVFSDLISYIESLRRIRSLKPDIIYPAHGPVVEVGL 209 (216)
Q Consensus 155 ~~~--~~----~vl~~GD~~~~~~~-----~~~~~~~~~~~~l~~l~~~~~~~v~pgHg~~~~~~~ 209 (216)
+++ ++ ++||+||+++.+.. ....+..+|.++++++.++++++++||||.+++..+
T Consensus 185 ~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~v~pgHg~~~~~~~ 250 (294)
T 3m8t_A 185 EMTVKDGKEDREVLFFCSGTVALNRLVGQPTYAGIVDDYRATFAKAKAMKIDVLLGPHPEVYGMQA 250 (294)
T ss_dssp EEEEEETTEEEEEEECCCCCCTTCCCSSSCSSTTHHHHHHHHHHHHHHSCCSEEECSSGGGTTHHH
T ss_pred EEEccCCCccceEEEEcCccCCCCcCcCCCCCCchHHHHHHHHHHHHCCCCCEEEcCCCChhchHH
Confidence 986 33 69999998754321 122457899999999999999999999999987654
No 14
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.97 E-value=4.5e-32 Score=208.03 Aligned_cols=191 Identities=18% Similarity=0.253 Sum_probs=143.4
Q ss_pred CccccccceEEeccCCCCcc-CCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCC
Q psy1547 7 NVSQLSSRVIRVLGMNPGPM-TLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGG 85 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~~-~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg 85 (216)
++++|++++|++.+..+... ...+.|||+|+++++.+|||||... ...+.+.+.+.+.+.+|++|++||.|+||++|
T Consensus 8 ~~~~i~~~v~~~~~~~~~~g~~~~~~n~~li~~~~~~iliD~g~~~--~~~~~~~~~l~~~g~~i~~ii~TH~H~DH~gg 85 (228)
T 1jjt_A 8 KIEKLDEGVYVHTSFEEVNGWGVVPKHGLVVLVNAEAYLIDTPFTA--KDTEKLVTWFVERGYKIKGSISSHFHSDSTGG 85 (228)
T ss_dssp EEEEEETTEEEEEEEEECTTSCEEEEEEEEEEETTEEEEESCCSSH--HHHHHHHHHHHTTTCEEEEEECSSSSHHHHTT
T ss_pred eEEEecCCeEEEEeecccCCCccccceEEEEEECCcEEEEeCCCCh--hhHHHHHHHHHHcCCCeeEEEeCCCChhhhcc
Confidence 57789999999975322111 1235899999999999999999862 22355677777777789999999999999999
Q ss_pred hHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEE-eCCCCCCCceEEEECCCcEEEE
Q psy1547 86 LKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVI-HTPGHTTDHIVLKLEEENVVFS 164 (216)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~-~~pgHt~~~~~~~~~~~~vl~~ 164 (216)
+..+.+. .+++++++.............+ ...+ .++.+.+++.+++++ ++||||+|+++++++++++||+
T Consensus 86 ~~~l~~~----~~~v~~~~~~~~~~~~~~~~~~----~~~~-~g~~~~l~~~~i~~~~~~pGHt~g~~~~~~~~~~~lf~ 156 (228)
T 1jjt_A 86 IEWLNSR----SIPTYASELTNELLKKDGKVQA----TNSF-SGVNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFG 156 (228)
T ss_dssp HHHHHHT----TCCEEEEHHHHHHHHHTTCCCC----SEEE-CSSCCEEETTTEEEECCCCSSSTTCCEEEETTTTEEEE
T ss_pred HHHHHhC----CCEEEEChHHHHHHHhcCCcCc----cccc-cCcceEecCceEEEEecCCCCCCCcEEEEECCCcEEEE
Confidence 9999873 2678877644332211111111 1223 256677888899997 8999999999999999999999
Q ss_pred cceecCCCccc--cccHHHHHHHHHHHHcC--CCCeEEcCCCccccCc
Q psy1547 165 GDTILGEGTTV--FSDLISYIESLRRIRSL--KPDIIYPAHGPVVEVG 208 (216)
Q Consensus 165 GD~~~~~~~~~--~~~~~~~~~~l~~l~~~--~~~~v~pgHg~~~~~~ 208 (216)
||+++....+. ..+..+|++++++++++ +.++++||||++....
T Consensus 157 GD~~~~~~~~~~~~~d~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~~~ 204 (228)
T 1jjt_A 157 GCFIKPYGLGNLGDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDAS 204 (228)
T ss_dssp ETTCCTTCCCCCTTCCTTTHHHHHHHHHHHTTTCSEEEESSSCCBCTH
T ss_pred eccccccccCccCccCHHHHHHHHHHHHhhcCCCCEEEcCCCCcCCHH
Confidence 99887544333 26788999999999987 7889999999988653
No 15
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.97 E-value=2e-31 Score=212.57 Aligned_cols=193 Identities=22% Similarity=0.334 Sum_probs=144.6
Q ss_pred CCCCccccccceEEeccCCCCccCCCCceEEEE-ecCCceEEEecCCCCC-hhHHHHHHHHHhhCCCCccEEEecccCcc
Q psy1547 4 KIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYIL-GTGSRRLLLDTGEPDH-MEYIENLKQVLNKESISLEHIVLSHWHND 81 (216)
Q Consensus 4 ~~~~~~~v~~~v~~v~~~~~~~~~~~~~n~~li-~~~~~~iliD~g~~~~-~~~~~~~~~~l~~~~~~i~~v~~TH~H~D 81 (216)
...++++|+++||.+. . ...|||+| .++++++|||||.... +...+.+.+.+. .+.+|++|++||.|+|
T Consensus 5 ~~~~~~~v~~~v~~ig-~-------~~~n~~li~~~~~~~iLID~G~~~~~~~~~~~l~~~~~-~~~~i~~Ii~TH~H~D 75 (303)
T 2vw8_A 5 RLSAPGQLDDDLCLLG-D-------VQVPVFLLRLGEASWALVEGGISRDAELVWADLCRWVA-DPSQVHYWLITHKHYD 75 (303)
T ss_dssp EECSSEEEETTEEEES-C-------TTSCEEEEEEETTEEEEECCCCGGGHHHHHHHHHHHCS-CGGGEEEEECCCCSTT
T ss_pred ccCCceeecCCeEEec-C-------CCceEEEEEeCCCceEEEECCCCCcHHHHHHHHHHHhc-CcccceEEEeccCCcc
Confidence 3457889999999992 2 35899999 5888999999998642 222333333321 2458999999999999
Q ss_pred ccCChHHHHhhcCCCcceEeccCCCCcccc-----------------cccCCCC----CCCceeecCCCCeEEECC-eeE
Q psy1547 82 HVGGLKDIFEHINPDSATIWKFKGTEKDEA-----------------QATDFVP----ENKTVQTLTDGQLLKVEG-ATL 139 (216)
Q Consensus 82 H~gg~~~~~~~~~~~~~~i~~~~~~~~~~~-----------------~~~~~~~----~~~~~~~~~~~~~~~~g~-~~i 139 (216)
|+||+..+.++++. +++++++....... .+..... ...+...+++|+.+.+|+ .++
T Consensus 76 H~gg~~~l~~~~~~--a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~g~~l 153 (303)
T 2vw8_A 76 HCGLLPYLCPRLPN--VQVLASERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRL 153 (303)
T ss_dssp TTTTHHHHGGGCTT--CEEEEEHHHHHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEE
T ss_pred ccCCHHHHHHhCCC--CeEEECHHHHHHHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecCCCeEE
Confidence 99999999988753 67777653321110 0000000 012346788999999987 999
Q ss_pred EEEeCCCCCCCceEEEECCCcEEEEcceecC--C--C--cc-ccccHHHHHHHHHHHHcCCCC-eEEcCCCccccC
Q psy1547 140 RVIHTPGHTTDHIVLKLEEENVVFSGDTILG--E--G--TT-VFSDLISYIESLRRIRSLKPD-IIYPAHGPVVEV 207 (216)
Q Consensus 140 ~~~~~pgHt~~~~~~~~~~~~vl~~GD~~~~--~--~--~~-~~~~~~~~~~~l~~l~~~~~~-~v~pgHg~~~~~ 207 (216)
+++++|||++|++++++++.++||+||++.. . . .+ ...+..+|+++++++.+++++ +++||||.+..+
T Consensus 154 ~~i~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~v~pgHg~~~~~ 229 (303)
T 2vw8_A 154 QVIEAHGHSDDHVVFYDVRRRRLFCGDALGEFDEAEGVWRPLVFDDMEAYLESLERLQRLPTLLQLIPGHGGLLRG 229 (303)
T ss_dssp EEEECTTSSTTCEEEEETTTTEEEEETTTCEECTTTCSEECCCSSCHHHHHHHHHHHHTSSCCSEEEESSSCEEEH
T ss_pred EEEECCCCCcccEEEEECCCCEEEEcCccCcccCcccccCCCCCCCHHHHHHHHHHHhcCCCCeEEECCCCCccCc
Confidence 9999999999999999999999999998632 1 1 11 247899999999999999999 999999999876
No 16
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.97 E-value=2.4e-31 Score=206.04 Aligned_cols=190 Identities=17% Similarity=0.258 Sum_probs=140.9
Q ss_pred CccccccceEEeccCCCCccCCCCceEEEEecC-CceEEEecCCCCChhHHHHHHHHHhhC-CCCccEEEecccCccccC
Q psy1547 7 NVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTG-SRRLLLDTGEPDHMEYIENLKQVLNKE-SISLEHIVLSHWHNDHVG 84 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~-~~~iliD~g~~~~~~~~~~~~~~l~~~-~~~i~~v~~TH~H~DH~g 84 (216)
++++|+++||++.+..+ .+.|||+|+.+ ++++|||||... ...+.+.+.+.+. +.+..+|++||.|+||+|
T Consensus 11 ~~~~i~~~v~~i~~~~~-----~~~n~~li~~~~~~~iLiD~G~~~--~~~~~l~~~l~~~~~~~~~~vi~TH~H~DH~g 83 (246)
T 2fhx_A 11 TATKIDSDVFVVTDRDF-----YSSNVLVAKMLDGTVVIVSSPFEN--LGTQTLMDWVAKTMKPKKVVAINTHFHLDGTG 83 (246)
T ss_dssp EEEEEETTEEEEEETTT-----TTEEEEEEECTTSEEEEESCCSSH--HHHHHHHHHHHHHHCCSEEEEECCSSSHHHHT
T ss_pred eEEEecCCEEEEECcCC-----CCCCEEEEEeCCCeEEEEeCCCCH--HHHHHHHHHHHHhcCCCcEEEEeCCCCccccC
Confidence 56789999999986432 35899999865 579999999862 2223344444332 333448999999999999
Q ss_pred ChHHHHhhcCCCcceEeccCCCCccccc------------cc----------CCCCCCCceeecCCCCeEEECCeeEEEE
Q psy1547 85 GLKDIFEHINPDSATIWKFKGTEKDEAQ------------AT----------DFVPENKTVQTLTDGQLLKVEGATLRVI 142 (216)
Q Consensus 85 g~~~~~~~~~~~~~~i~~~~~~~~~~~~------------~~----------~~~~~~~~~~~~~~~~~~~~g~~~i~~~ 142 (216)
|+..+.+ +. +++++++........ +. ...........+++|+++.+|+.+++++
T Consensus 84 g~~~l~~-~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~~~ 159 (246)
T 2fhx_A 84 GNEIYKK-MG---AETWSSDLTKQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVS 159 (246)
T ss_dssp THHHHHH-TT---CEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEETTEEEEEE
T ss_pred hHHHHhh-cC---CEEEEcHHHHHHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCCCEEEECCEEEEEE
Confidence 9999976 32 688877644322100 00 0011122344688999999999999999
Q ss_pred e-CCCCCCCceEEEECCCcEEEEcceecCCCcccc--ccHHHHHHHHHHHHcCCCCeEEcCCCccccC
Q psy1547 143 H-TPGHTTDHIVLKLEEENVVFSGDTILGEGTTVF--SDLISYIESLRRIRSLKPDIIYPAHGPVVEV 207 (216)
Q Consensus 143 ~-~pgHt~~~~~~~~~~~~vl~~GD~~~~~~~~~~--~~~~~~~~~l~~l~~~~~~~v~pgHg~~~~~ 207 (216)
+ +||||+|+++++++++++||+||+++....+.+ .+..+|+++++++.+++++.++||||.++..
T Consensus 160 ~~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~i~pgHg~~~~~ 227 (246)
T 2fhx_A 160 FPGPAHSPDNVVVYFPKKKLLFGGCMIKPKELGYLGDANVKAWPDSARRLKKFDAKIVIPGHGEWGGP 227 (246)
T ss_dssp CCCCSSSTTCCEEEETTTTEEEEETTCCSSCCCCCTTCCTTTHHHHHHHGGGSCCSEEEESBSCCBST
T ss_pred eCCCCCCCCCEEEEEcCCCEEEECCEeccCCCCCCCCCCHHHHHHHHHHHHhCCCCEEECCCCCcCCH
Confidence 5 999999999999999999999999876544333 5789999999999999999999999998764
No 17
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.97 E-value=2.9e-31 Score=207.90 Aligned_cols=191 Identities=18% Similarity=0.302 Sum_probs=139.0
Q ss_pred CccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhC-CCCccEEEecccCccccCC
Q psy1547 7 NVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKE-SISLEHIVLSHWHNDHVGG 85 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~-~~~i~~v~~TH~H~DH~gg 85 (216)
++++|++|+|.+.+..+.+....+.|||+|+++++.+|||||.+. ...+.+.+.+.+. +.+|++|++||.|+||+||
T Consensus 44 ~~~~l~dgv~~~~~~~~~~~~~~~~n~~li~~~~~~iLID~G~~~--~~~~~l~~~l~~~~g~~i~~VilTH~H~DH~gg 121 (265)
T 2y8b_A 44 RLYKIGDGVWSHIATQKLGDTVYSSNGLIVRDADELLLIDTAWGA--KNTVALLAEIEKQIGLPVTRSISTHFHDDRVGG 121 (265)
T ss_dssp EEEEEETTEEEEEEEEEETTEEEEEEEEEEEETTEEEEESCCSSH--HHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTT
T ss_pred eEEEecCCeEEEeccccCCCCcccceEEEEEECCeEEEEeCCCCH--HHHHHHHHHHHHhcCCCeEEEEeCCCChhhcCC
Confidence 466899999998653221112345899999999999999999862 2234555566655 6789999999999999999
Q ss_pred hHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCce-eecCCCCeEEECCeeEEE-EeCCCCCCCceEEEECCCcEEE
Q psy1547 86 LKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTV-QTLTDGQLLKVEGATLRV-IHTPGHTTDHIVLKLEEENVVF 163 (216)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~i~~-~~~pgHt~~~~~~~~~~~~vl~ 163 (216)
+..+.+. .+++++++.............. ...+ ...++++.+.+|+ +++ +++||||+|+++++++++++||
T Consensus 122 ~~~~~~~----~a~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~--~~v~~~~pGHt~g~~~~~~~~~~~lf 194 (265)
T 2y8b_A 122 VDVLRAA----GVATYTSPLTRQLAEAAGNEVP-AHSLKALSSSGDVVRFGP--VEVFYPGAAHSGDNLVVYVPAVRVLF 194 (265)
T ss_dssp HHHHHHT----TCEEEECHHHHHHHHHTTCCCC-SEECSSCSSTTEEEEETT--EEEEECCSSSSTTCCEEEETTTTEEE
T ss_pred HHHHhhC----CCeEEECHHHHHHHHhcccccc-cccccccCCCCcEEeecC--EEEEecCCCCCCCCEEEEecCCCEEE
Confidence 9998763 3788887654332211111110 0011 1136778888887 555 7899999999999999899999
Q ss_pred EcceecCCCc-----cccccHHHHHHHHHHHHcC--CCCeEEcCCCcccc
Q psy1547 164 SGDTILGEGT-----TVFSDLISYIESLRRIRSL--KPDIIYPAHGPVVE 206 (216)
Q Consensus 164 ~GD~~~~~~~-----~~~~~~~~~~~~l~~l~~~--~~~~v~pgHg~~~~ 206 (216)
+||+++.... ....+..+|.++++++.++ +.+.++||||.+..
T Consensus 195 ~GD~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~ 244 (265)
T 2y8b_A 195 GGCAVHEASRESAGNVADANLAEWPATIKRIQQRYPEAEVVIPGHGLPGG 244 (265)
T ss_dssp EETTSCCTTCCSCCCCTTCCTTTHHHHHHHHHHHCTTCSEEEESSSCCBC
T ss_pred EccccccCCCcccCcCCcCCHHHHHHHHHHHHhhCCCCCEEECCCCCCCC
Confidence 9998876421 1225789999999999987 67799999999885
No 18
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.97 E-value=3e-30 Score=200.78 Aligned_cols=158 Identities=27% Similarity=0.397 Sum_probs=129.4
Q ss_pred ceEEEEecC--CceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCCCc
Q psy1547 31 TNTYILGTG--SRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEK 108 (216)
Q Consensus 31 ~n~~li~~~--~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~ 108 (216)
.|||+|.++ +.++|||||.. +.+.+.+.+.+.+|++|++||.|+||++|+..+.++++ ++++.++....
T Consensus 12 n~~yli~~~~~~~~~lID~g~~------~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~---~~v~~~~~~~~ 82 (254)
T 1xm8_A 12 NYAYILHDEDTGTVGVVDPSEA------EPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRYG---AKVIGSAMDKD 82 (254)
T ss_dssp EEEEEEECTTTCCEEEECCSSH------HHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHHC---CEEEEEGGGGG
T ss_pred eEEEEEEECCCCEEEEEeCCCH------HHHHHHHHHcCCCccEEEECCCCCcccccHHHHHHHcC---CeEEEchhhhh
Confidence 459999875 57999999842 33455555557789999999999999999999999875 68888765432
Q ss_pred ccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCCcEEEEcceecCCCc--cccccHHHHHHHH
Q psy1547 109 DEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGT--TVFSDLISYIESL 186 (216)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~~vl~~GD~~~~~~~--~~~~~~~~~~~~l 186 (216)
.. + .....+++|+.+.+|+.+++++++||||+|++++++++.+++|+||+++.... .+..+..+|.+|+
T Consensus 83 ~~-------~--~~~~~~~~g~~~~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~l~~~~~g~~~~~~~~~~~~Sl 153 (254)
T 1xm8_A 83 RI-------P--GIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSLSCGKLFEGTPKQMLASL 153 (254)
T ss_dssp GS-------T--TEEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEGGGTEEEEETTEETTEECCCSSSCHHHHHHHH
T ss_pred cC-------C--CCceeeCCCCEEEECCEEEEEEECCCCCCCcEEEEECCCCEEEEcCccccCCCCCCCCCCHHHHHHHH
Confidence 21 1 14567899999999999999999999999999999998899999999886432 2336899999999
Q ss_pred HHHHcCCCC-eEEcCCCcccc
Q psy1547 187 RRIRSLKPD-IIYPAHGPVVE 206 (216)
Q Consensus 187 ~~l~~~~~~-~v~pgHg~~~~ 206 (216)
+++.+++.+ .++||||++.+
T Consensus 154 ~~l~~l~~~~~v~pgHg~~~~ 174 (254)
T 1xm8_A 154 QKITSLPDDTSIYCGHEYTLS 174 (254)
T ss_dssp HHHHTSCTTCEEEESBCCHHH
T ss_pred HHHHccCCCcEEEeCCcchhc
Confidence 999999887 89999998764
No 19
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.97 E-value=2.9e-30 Score=195.49 Aligned_cols=172 Identities=28% Similarity=0.424 Sum_probs=133.3
Q ss_pred CCceEEEEe--cCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCC
Q psy1547 29 QGTNTYILG--TGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGT 106 (216)
Q Consensus 29 ~~~n~~li~--~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~ 106 (216)
.+.|||+|+ .+++.+|||||.. .+.+.+.+.+.+.++++|++||.|+||++|+..+.++++ +++++++..
T Consensus 11 ~~~n~~li~~~~~~~~iLiD~G~~-----~~~l~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~~---~~v~~~~~~ 82 (210)
T 2xf4_A 11 FSQNCSLIWCEQTRLAALVDPGGD-----AEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHYG---VPVIGPEKE 82 (210)
T ss_dssp TTEEEEEEECTTTCEEEEECCCSC-----HHHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHHHT---CCEECCCGG
T ss_pred cccEEEEEEecCCCcEEEEcCCCC-----HHHHHHHHHHcCCceeEEEECCCChhhhcCHHHHHHHcC---CcEEEecch
Confidence 358999998 4678999999954 244555566556679999999999999999999998875 678877654
Q ss_pred Cccccc--------ccC-CCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCCcEEEEcceecCCCcc---
Q psy1547 107 EKDEAQ--------ATD-FVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTT--- 174 (216)
Q Consensus 107 ~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~~vl~~GD~~~~~~~~--- 174 (216)
...... ++. ......+...+++|+.+.+|+.+++++++|||++|++++++++.+++|+||+++.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~ 162 (210)
T 2xf4_A 83 DEFWLQGLPAQSRMFGLDECQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFDEQSQLLISGDVIFKGGVGRSD 162 (210)
T ss_dssp GHHHHHTHHHHHHHTTCCCCCCCCCSBCCCTTCEEEETTEEEEEEECCSSSTTCEEEEETTTTEEEEETSEETTEECCCC
T ss_pred HHHHhccchhhhhhcCCcccCCCCCceEECCCCEEEECCeEEEEEECCCCCCCcEEEEeCCCCEEEECCEeccCCcCCCC
Confidence 322111 111 01111345678899999999999999999999999999999999999999998764321
Q ss_pred -ccccHHHHHHHH-HHHHcCCCC-eEEcCCCccccCc
Q psy1547 175 -VFSDLISYIESL-RRIRSLKPD-IIYPAHGPVVEVG 208 (216)
Q Consensus 175 -~~~~~~~~~~~l-~~l~~~~~~-~v~pgHg~~~~~~ 208 (216)
...+..+|++++ +++.+++.+ +++||||++.+..
T Consensus 163 ~~~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~~~~~ 199 (210)
T 2xf4_A 163 FPRGDHTQLIDAIKRKLLPLGDDVTFIPGHGPLSTLG 199 (210)
T ss_dssp STTCCHHHHHHHHHHHTGGGCTTCEEEESSSCCEEHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCeEEECCCCCcccHH
Confidence 236889999999 789999887 8999999987644
No 20
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.97 E-value=5.2e-30 Score=201.14 Aligned_cols=193 Identities=19% Similarity=0.270 Sum_probs=143.2
Q ss_pred CccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCC---CccEEEecccCcccc
Q psy1547 7 NVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESI---SLEHIVLSHWHNDHV 83 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~---~i~~v~~TH~H~DH~ 83 (216)
.+.+|.+++|.+.. .+.|||+|+++++.+|||||.... .+.+.+.+.+.+. +|++|++||.|.||+
T Consensus 22 ~~~~v~~~v~~ig~--------~~~~~~li~~~~~~iLID~G~~~~---~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~ 90 (269)
T 1sml_A 22 APLQIADHTWQIGT--------EDLTALLVQTPDGAVLLDGGMPQM---ASHLLDNMKARGVTPRDLRLILLSHAHADHA 90 (269)
T ss_dssp CCEEEETTEEECSB--------TTBCCEEEEETTEEEEECCBSGGG---HHHHHHHHHHTTCCGGGEEEEECSCCSHHHH
T ss_pred CceeEeCCEEEecC--------CCcEEEEEEeCCceEEEECCCCcc---HHHHHHHHHHcCCChHHCcEEEeCCCCcccc
Confidence 46789999999932 257899999999999999997532 3445556665554 599999999999999
Q ss_pred CChHHHHhhcCCCcceEeccCCCCcccc-------cccC--CCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEE
Q psy1547 84 GGLKDIFEHINPDSATIWKFKGTEKDEA-------QATD--FVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVL 154 (216)
Q Consensus 84 gg~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~ 154 (216)
+|+..+.+.+. ++++.++....... .+.. ..........+++|+.+.+|+.+++++++|||++|++++
T Consensus 91 gg~~~l~~~~~---~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~g~~~~ 167 (269)
T 1sml_A 91 GPVAELKRRTG---AKVAANAESAVLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVGGIVFTAHFMAGHTPGSTAW 167 (269)
T ss_dssp TTHHHHHHHSS---CEEEECHHHHHHHHTTTCSBTTTBTSSCCCCCCCSEECCTTCEEEETTEEEEEEECCSSSTTCEEE
T ss_pred CCHHHHHHhcC---CeEEECHHHHHHHhcCCccccccccccCCCCCCCCeEeCCCCEEEECCEEEEEEECCCCCcccEEE
Confidence 99999988764 67877653322110 0110 111122456788999999999999999999999999999
Q ss_pred EECC---Cc--EEEEcceecCCCcccc------ccHHHHHHHHHHHHcCCCCeEEcCCCccccCcccccc
Q psy1547 155 KLEE---EN--VVFSGDTILGEGTTVF------SDLISYIESLRRIRSLKPDIIYPAHGPVVEVGLSFSL 213 (216)
Q Consensus 155 ~~~~---~~--vl~~GD~~~~~~~~~~------~~~~~~~~~l~~l~~~~~~~v~pgHg~~~~~~~~~~~ 213 (216)
+++. ++ .++.||+++....... .+..+|.++++++.++++++++|+|+.+.+.....+.
T Consensus 168 ~~~~~~~~~~~~l~~gD~l~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~l~~~H~~~~~~~~~~~~ 237 (269)
T 1sml_A 168 TWTDTRNGKPVRIAYADSLSAPGYQLQGNPRYPHLIEDYRRSFATVRALPCDVLLTPHPGASNWDYAAGA 237 (269)
T ss_dssp EEEEEETTEEEEEEECCCCCCTTCCCSSCTTCTTHHHHHHHHHHHHHTSCCSEEECSSGGGGTCCGGGGG
T ss_pred EEecccCCceeEEEEeccccCCCcccccCCCCCcCHHHHHHHHHHHHcCCCCEEEeCCCCccchhhhhcc
Confidence 9863 22 6777999875433221 2368899999999999999999999998765554443
No 21
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.97 E-value=7.5e-30 Score=192.86 Aligned_cols=167 Identities=28% Similarity=0.430 Sum_probs=128.8
Q ss_pred CCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCCCc
Q psy1547 29 QGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEK 108 (216)
Q Consensus 29 ~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~ 108 (216)
.+.|||+|+++++.+|||||.. . +.+.+.+.+.+.+|++|++||.|+||++|+..+.+++. +++++++....
T Consensus 11 ~~~n~~li~~~~~~iliD~G~~--~---~~l~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~~~---~~v~~~~~~~~ 82 (207)
T 2zwr_A 11 LQENAYLVETGEGPVLIDPGDE--P---EKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEALD---LPVYLHPLDLP 82 (207)
T ss_dssp TTEEEEEEEETTEEEEECCCSC--H---HHHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHHHHC---CCEEECGGGHH
T ss_pred cccEEEEEEeCCcEEEEeCCCC--H---HHHHHHHHHcCCcccEEEECCCChHHHccHHHHHHHhC---CcEEECHHHHH
Confidence 3689999999999999999964 2 34555555556679999999999999999999988764 68888765543
Q ss_pred cccc-------ccCCCCC-CCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCCcEEEEcceecCCCcc----cc
Q psy1547 109 DEAQ-------ATDFVPE-NKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTT----VF 176 (216)
Q Consensus 109 ~~~~-------~~~~~~~-~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~~vl~~GD~~~~~~~~----~~ 176 (216)
.... ++..... ..+...+++|+.+. .++++++|||++|++++++++++++|+||+++..... ..
T Consensus 83 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~i~----~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~ 158 (207)
T 2zwr_A 83 LYEGADLAARAWGLAIPKPPLPVRPLEEGMRLF----GFQVLHLPGHSPGHVAFYDPEGAQVFSGDLLFRGSVGRYDLPG 158 (207)
T ss_dssp HHHTHHHHHHHTTCCCCCCCSCCEECCTTCEET----TEEEEECCSSSTTCEEEEETTTTEEEEETSEETTEECCSSSTT
T ss_pred HHhCchhhhhhcCCCCCcCCCCceEeCCCCEEE----EEEEEeCCCCCCCcEEEEECCCCEEEEecccCCCCcCCCCCCC
Confidence 2211 1111111 11456778888765 6999999999999999999999999999998764221 22
Q ss_pred ccHHHHHHHHHHHHcCCCC-eEEcCCCccccC
Q psy1547 177 SDLISYIESLRRIRSLKPD-IIYPAHGPVVEV 207 (216)
Q Consensus 177 ~~~~~~~~~l~~l~~~~~~-~v~pgHg~~~~~ 207 (216)
.+..+|+++++++.+++.+ .++||||++...
T Consensus 159 ~~~~~~~~sl~~l~~l~~~~~i~pgHg~~~~~ 190 (207)
T 2zwr_A 159 ADPKALFASLKRLLSLPPETRVHPGHGPGTTL 190 (207)
T ss_dssp CCHHHHHHHHHHHTTSCTTCEEEESBSCCEEH
T ss_pred CCHHHHHHHHHHHhcCCCCCEEECCCCCCCcH
Confidence 6889999999999999888 799999998753
No 22
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.97 E-value=1.3e-29 Score=201.70 Aligned_cols=186 Identities=18% Similarity=0.258 Sum_probs=140.9
Q ss_pred CccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCC---CccEEEecccCcccc
Q psy1547 7 NVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESI---SLEHIVLSHWHNDHV 83 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~---~i~~v~~TH~H~DH~ 83 (216)
.+.++.+++|++.. .+.|||+|+++++.+|||||..... +.+.+.+.+.+. +|++|++||.|.||+
T Consensus 42 ~~~~i~~~~~~vg~--------~~~~~~li~~~~~~iLiD~G~~~~~---~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~ 110 (303)
T 4ax1_B 42 MPLKVYGNTWYVGT--------CGISALLVTSDAGHILVDAATPQAG---PQILANIRALGFRPEDVRAIVFSHEHFDHA 110 (303)
T ss_dssp CCEEEETTEEECSB--------SSSCCEEECCTTCEEEECCBSTTCH---HHHHHHHHHTTCCGGGEEEEECSCSSHHHH
T ss_pred CCeEEECCceEeCC--------CCceEEEEEeCCcEEEEECCCcccH---HHHHHHHHHcCCCHHHCcEEEcCCCCcccc
Confidence 34578899999842 2589999999999999999975433 445555555544 499999999999999
Q ss_pred CChHHHHhhcCCCcceEeccCCCCcccccc-----------cCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCce
Q psy1547 84 GGLKDIFEHINPDSATIWKFKGTEKDEAQA-----------TDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHI 152 (216)
Q Consensus 84 gg~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~ 152 (216)
+|+..+.+++. ++++.++......... ........+...+++|+++.+|+.+++++++|||++|++
T Consensus 111 gg~~~l~~~~~---~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~g~~ 187 (303)
T 4ax1_B 111 GSLAELQKATG---APVYARAPAIDTLKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHTPGGT 187 (303)
T ss_dssp TTHHHHHHHHC---CCEEEEHHHHHHHHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEETTEEEEEEECCSSSTTCE
T ss_pred CCHHHHHhhcC---CEEEEcHHHHHHHhccccCccccccccccCcCCCCCcEEeCCCCEEEECCeEEEEEeCCCCCccce
Confidence 99999998764 6777765332211110 111223356788999999999999999999999999999
Q ss_pred EEEECCC-----cEEEEcceecCCCccc---------cccHHHHHHHHHHHHcCCCCeEEcCCCcccc
Q psy1547 153 VLKLEEE-----NVVFSGDTILGEGTTV---------FSDLISYIESLRRIRSLKPDIIYPAHGPVVE 206 (216)
Q Consensus 153 ~~~~~~~-----~vl~~GD~~~~~~~~~---------~~~~~~~~~~l~~l~~~~~~~v~pgHg~~~~ 206 (216)
++++++. +.++.||+++...... ..+..+|+++++++..+++++++|+|+.+..
T Consensus 188 ~~~~~~~~~~~~~~~l~gD~l~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~vv~~Hg~~~~ 255 (303)
T 4ax1_B 188 SWTWRSCEGDDCRQMVYADSLTAISDDVFRYSDDAAHPGYLAAFRNTLARVAALDCDILVTPHPSASG 255 (303)
T ss_dssp EEEEEEEETTEEEEEEECCCCCCCCCSSCCTTCGGGSTTHHHHHHHHHHHHHTSCCSEEECSSGGGGT
T ss_pred EEEEEecCCCceeEEEEeCCccccCcCcccCCCCCCCccHHHHHHHHHHHHhcCCCCEEEcCCcchhh
Confidence 9999752 3456699887543221 1457899999999999999999999998865
No 23
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=3.3e-29 Score=199.35 Aligned_cols=174 Identities=21% Similarity=0.251 Sum_probs=134.7
Q ss_pred CCceEEEEec--CCceEEEecCCCCC-------hhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcce
Q psy1547 29 QGTNTYILGT--GSRRLLLDTGEPDH-------MEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSAT 99 (216)
Q Consensus 29 ~~~n~~li~~--~~~~iliD~g~~~~-------~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~ 99 (216)
.++|||+|.+ +++++|||||.... ....+.+.+.+.+.+.+|++|++||.|+||++|+..+.+++. ++
T Consensus 15 ~~~~~yli~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~---a~ 91 (298)
T 4efz_A 15 TCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPYLKTRVG---GE 91 (298)
T ss_dssp TCBEEEEEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCEEEEEECSSCCSSSBCCHHHHHHHHC---CE
T ss_pred cccEEEEEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCcceEEEECCCchhhhhhHHHHHHHhC---Cc
Confidence 3689999976 56799999997421 023456777777778889999999999999999999999875 68
Q ss_pred EeccCCCCccccc----ccCC----CCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCCc--------EEE
Q psy1547 100 IWKFKGTEKDEAQ----ATDF----VPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEEN--------VVF 163 (216)
Q Consensus 100 i~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~~--------vl~ 163 (216)
++.++........ ++.. .........+++|+++.+|+.+++++++||||+|++++++++.+ ++|
T Consensus 92 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~vi~tPGHT~g~~~~~~~~~~~~~~~~~~~lf 171 (298)
T 4efz_A 92 IAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAHAAHDARDAAAF 171 (298)
T ss_dssp EEEETTHHHHHHHHHHHTTCCTTSCSSSTTSSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEETTCCGGGCBCEEE
T ss_pred EEEChhHHHHHHHHHHhcCCcccccccccCCCEEeCCCCEEEECCEEEEEEECCCCCcccEEEEECCCcccccCCceEEE
Confidence 8877653221111 1100 11112357899999999999999999999999999999998655 999
Q ss_pred EcceecCCC----ccc--cccHHHHHHHHHHHHcCCCC-eEEcCCCccc
Q psy1547 164 SGDTILGEG----TTV--FSDLISYIESLRRIRSLKPD-IIYPAHGPVV 205 (216)
Q Consensus 164 ~GD~~~~~~----~~~--~~~~~~~~~~l~~l~~~~~~-~v~pgHg~~~ 205 (216)
+||+++.+. ... ..+..+|.+||+++.+++.+ +|+||||...
T Consensus 172 tGD~l~~~~~g~~r~d~~~~d~~~~~~Sl~kl~~L~~~~~v~pgHg~~~ 220 (298)
T 4efz_A 172 VGDTLFMPDYGTARCDFPGGDARSLYRSIRKVLSLPPATRLYMCHDYQP 220 (298)
T ss_dssp CCSSBCCTTTCBCCCCSTTCCHHHHHHHHHHHTTSCTTCEEECSBCSCC
T ss_pred EcCccccCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCEEEECCCCCCc
Confidence 999988642 221 26899999999999999999 8999999654
No 24
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.96 E-value=3e-29 Score=195.54 Aligned_cols=156 Identities=28% Similarity=0.481 Sum_probs=127.1
Q ss_pred CceEEEEec-CCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCCCc
Q psy1547 30 GTNTYILGT-GSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEK 108 (216)
Q Consensus 30 ~~n~~li~~-~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~ 108 (216)
..|||+|.+ +++.+|||||.. +.+.+.+.+.+.+|++|++||.|+||++|+..+.++++. ++++.++....
T Consensus 18 ~n~~yli~~~~~~~vlID~G~~------~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~--~~v~~~~~~~~ 89 (258)
T 2qed_A 18 DNYIWVLTNDEGRCVIVDPGEA------APVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHFPQ--MTVYGPAETQD 89 (258)
T ss_dssp TEEEEEEECTTSEEEEECCSCH------HHHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHCTT--CEEEECGGGGG
T ss_pred ceEEEEEEECCCcEEEEeCCCc------HHHHHHHHHcCCCCCEEEeCCCCccccCCHHHHHHHCCC--CEEEecccccC
Confidence 456999987 678999999953 334555555566899999999999999999999998753 67887754321
Q ss_pred ccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCCcEEEEcceecCCCc--cccccHHHHHHHH
Q psy1547 109 DEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGT--TVFSDLISYIESL 186 (216)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~~vl~~GD~~~~~~~--~~~~~~~~~~~~l 186 (216)
......+++|+++.+|+.+++++++||||+|+++++ +.+++|+||+++.... .+..+..+|++++
T Consensus 90 -----------~~~~~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~--~~~~lftGD~l~~~~~g~~~~~~~~~~~~sl 156 (258)
T 2qed_A 90 -----------KGATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYF--SRPYLFCGDTLFSGGCGRLFEGTPSQMYQSL 156 (258)
T ss_dssp -----------GTCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEE--ETTEEEEETTEETTEECCCSSSCHHHHHHHH
T ss_pred -----------CCCcEEeCCCCEEEECCcEEEEEECCCCCCCCeEEE--cCCEEEECCCCCCCCcCCCCCCCHHHHHHHH
Confidence 024567899999999999999999999999999999 6899999999886432 2236899999999
Q ss_pred HHHHcCCCC-eEEcCCCcccc
Q psy1547 187 RRIRSLKPD-IIYPAHGPVVE 206 (216)
Q Consensus 187 ~~l~~~~~~-~v~pgHg~~~~ 206 (216)
+++.+++.+ +++||||++.+
T Consensus 157 ~~l~~l~~~~~v~pgHg~~~~ 177 (258)
T 2qed_A 157 MKINSLPDDTLICCAHEYTLA 177 (258)
T ss_dssp HHHHTSCTTCEEEESBCCHHH
T ss_pred HHHHcCCCCeEEECCCcchhh
Confidence 999999998 79999998654
No 25
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.96 E-value=1.2e-28 Score=190.75 Aligned_cols=157 Identities=26% Similarity=0.332 Sum_probs=128.3
Q ss_pred CceEEEEecC----CceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCC
Q psy1547 30 GTNTYILGTG----SRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKG 105 (216)
Q Consensus 30 ~~n~~li~~~----~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~ 105 (216)
++|||+|.++ ++++|||||... .+.+.+.+.+.+.+|++|++||.|+||++|+..+.++++. ++++.++.
T Consensus 14 ~~~~yli~~~~~~~~~~ilID~g~~~----~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~--~~v~~~~~ 87 (245)
T 2gcu_A 14 STFTYLLADVSHPDKPALLIDPVDKT----VDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPG--VKSVISKA 87 (245)
T ss_dssp TEEEEEEEETTSTTCEEEEESCBGGG----HHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHHSTT--CEEEEEGG
T ss_pred ceEEEEEEcCCCCCCcEEEEeCCCch----HHHHHHHHHHCCCeeeEEEeCCCChhhhhhHHHHHHhCCC--CeEEeccc
Confidence 5889999874 689999999742 2455566666677899999999999999999999886543 67887654
Q ss_pred CCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCC------cEEEEcceecCCCccc----
Q psy1547 106 TEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEE------NVVFSGDTILGEGTTV---- 175 (216)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~------~vl~~GD~~~~~~~~~---- 175 (216)
... .....+++|+.+.+|+.+++++++||||+|++++++++. +++|+||+++......
T Consensus 88 ~~~------------~~~~~~~~g~~~~~g~~~i~v~~tpGHt~g~~~~~~~~~~~~~~~~~lftGD~~~~~~~~~~d~~ 155 (245)
T 2gcu_A 88 SGS------------KADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQ 155 (245)
T ss_dssp GCC------------CCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEECCSTTSCSSCEEEEETTSBTTBCCCCSST
T ss_pred ccc------------cCCEEcCCCCEEEECCEEEEEEECCCCCCCCEEEEECCccccccccEEEECCccccCCccCCCCC
Confidence 321 234678999999999999999999999999999999865 8999999987643322
Q ss_pred cccHHHHHHHH-HHHHcCCCC-eEEcCCCcc
Q psy1547 176 FSDLISYIESL-RRIRSLKPD-IIYPAHGPV 204 (216)
Q Consensus 176 ~~~~~~~~~~l-~~l~~~~~~-~v~pgHg~~ 204 (216)
..+..+|.+|| +++.+++++ +++||||..
T Consensus 156 ~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~ 186 (245)
T 2gcu_A 156 EGSSDQLYESVHSQIFTLPKDTLIYPAHDYK 186 (245)
T ss_dssp TCCHHHHHHHHHHHTTTSCTTCEEEESBCSS
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 26789999999 899999988 899999984
No 26
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.96 E-value=4.9e-29 Score=194.50 Aligned_cols=157 Identities=21% Similarity=0.343 Sum_probs=126.6
Q ss_pred CceEEEEecC--CceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCCC
Q psy1547 30 GTNTYILGTG--SRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTE 107 (216)
Q Consensus 30 ~~n~~li~~~--~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~ 107 (216)
..|||+|..+ ++.+|||||.. +.+.+.+.+.+.+|++|++||.|+||++|+..+.++++. ++++.++...
T Consensus 11 ~n~~yli~~~~~~~~vlID~G~~------~~i~~~l~~~g~~i~~IllTH~H~DH~gg~~~l~~~~~~--~~v~~~~~~~ 82 (260)
T 1qh5_A 11 DNYMYLVIDDETKEAAIVDPVQP------QKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESG--LKVYGGDDRI 82 (260)
T ss_dssp TEEEEEEEETTTTEEEEESCSSH------HHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHSTT--CEEEESCTTS
T ss_pred ceEEEEEEECCCCEEEEEcCCCH------HHHHHHHHHcCCCccEEEeCCCCccccCCHHHHHHHCCC--CEEEECcccC
Confidence 3559999874 68999999942 345555665577899999999999999999999998753 6888875321
Q ss_pred cccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEE-----CCCcEEEEcceecCCCcc--ccccHH
Q psy1547 108 KDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKL-----EEENVVFSGDTILGEGTT--VFSDLI 180 (216)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~-----~~~~vl~~GD~~~~~~~~--~~~~~~ 180 (216)
. .....+.+|+.+.+|+.+++++++||||+|++++++ ++.+++|+||+++..... ...+..
T Consensus 83 ~------------~~~~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~~~~~~~~~~~~lftGD~l~~~~~g~~~~~~~~ 150 (260)
T 1qh5_A 83 G------------ALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGKFYEGTAD 150 (260)
T ss_dssp T------------TCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEECSSSSSCCEEEEETTEETTEECCCTTCCHH
T ss_pred C------------CCCEEeCCCCEEEECCEEEEEEECCCCCCCCEEEEEeccCCCCCCEEEEcCccccCCcCCCCCCCHH
Confidence 1 235678899999999999999999999999999999 678999999998865332 236889
Q ss_pred HHHHHHH-HHHcCCCC-eEEcCCCcccc
Q psy1547 181 SYIESLR-RIRSLKPD-IIYPAHGPVVE 206 (216)
Q Consensus 181 ~~~~~l~-~l~~~~~~-~v~pgHg~~~~ 206 (216)
++.+|++ ++.+++.+ .++||||+..+
T Consensus 151 ~~~~Sl~~~l~~l~~~~~v~pgHg~~~~ 178 (260)
T 1qh5_A 151 EMCKALLEVLGRLPPDTRVYCGHEYTIN 178 (260)
T ss_dssp HHHHHHHTTTTTSCTTCEEEESBCCHHH
T ss_pred HHHHHHHHHHHcCCCCeEEEcCCCchhc
Confidence 9999994 68889888 69999997643
No 27
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.96 E-value=1e-28 Score=185.90 Aligned_cols=175 Identities=21% Similarity=0.208 Sum_probs=134.8
Q ss_pred ccccc-cceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCCh
Q psy1547 8 VSQLS-SRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGL 86 (216)
Q Consensus 8 ~~~v~-~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~ 86 (216)
+++|. +++|.+....+. ...+.|||+|+++++.+|||||... . .+.+.+.+.+ +|++|++||. ||++|+
T Consensus 2 ~~~i~~~~v~~~~~~~~~--~~~~~n~~li~~~~~~iliD~g~~~-~----~~~~~l~~~g-~i~~ii~TH~--DH~gg~ 71 (201)
T 2p97_A 2 MKSLHRPDLYSWSTFNPA--RNIDFNGFAWIRPEGNILIDPVALS-N----HDWKHLESLG-GVVWIVLTNS--DHVRSA 71 (201)
T ss_dssp CEECSSTTEEEEEEEETT--TTEEEEEEEECCTTCCEEESCCCCC-H----HHHHHHHHTT-CCSEEECSSG--GGCTTH
T ss_pred cccccCCCEEeeecccCC--CCcceeEEEEEeCCeeEEEECCCCc-H----HHHHHHHhcC-CCCEEEECCc--hhhhhH
Confidence 57889 999999753322 2346899999998899999999532 2 2344555555 8999999999 999999
Q ss_pred HHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCC-CCCCCceEEEECCCcEEEEc
Q psy1547 87 KDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTP-GHTTDHIVLKLEEENVVFSG 165 (216)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p-gHt~~~~~~~~~~~~vl~~G 165 (216)
..+.++++ +++++++........ .....+++++.+.. .++++++| |||+|++++++++ ++||+|
T Consensus 72 ~~~~~~~~---a~v~~~~~~~~~~~~--------~~~~~~~~g~~~~~---~~~~~~~p~gHt~g~~~~~~~~-~~lf~G 136 (201)
T 2p97_A 72 KEIADQTY---TKIAGPVAEKENFPI--------YCDRWLSDGDELVP---GLKVMELQGSKTPGELALLLEE-TTLITG 136 (201)
T ss_dssp HHHHHHSC---CEEEEEGGGTTSCSS--------CCSEEECTTCBSST---TEEEEEECSSSSTTEEEEEETT-TEEEEC
T ss_pred HHHHHhcC---CEEEEcHhHhhhhcc--------cCceecCCCCEEcc---eEEEEECCCCCCCCcEEEEEcC-CEEEEC
Confidence 99999875 788887654432211 11456777776532 69999999 9999999999987 999999
Q ss_pred ceecCC--Cccc------cccHHHHHHHHHHHHc-CCCCeEEcCCCccccC
Q psy1547 166 DTILGE--GTTV------FSDLISYIESLRRIRS-LKPDIIYPAHGPVVEV 207 (216)
Q Consensus 166 D~~~~~--~~~~------~~~~~~~~~~l~~l~~-~~~~~v~pgHg~~~~~ 207 (216)
|+++.. .... ..+..+++++++++.+ ++++.++||||.++..
T Consensus 137 D~~~~~~~g~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~~v~pgHg~~~~~ 187 (201)
T 2p97_A 137 DLVRAYRAGGLEILPDEKLMNKQKVVASVRRLAALEKVEAVLVGDGWSVFR 187 (201)
T ss_dssp SSEEBSSTTSCEECCGGGCSCHHHHHHHHHHHHTCTTCCEEEESBBCCBCS
T ss_pred ccccccCCCccccCCccccCCHHHHHHHHHHHHhcCCCCEEEeCCCcceec
Confidence 998765 2211 2689999999999999 6889999999977644
No 28
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=99.96 E-value=4.9e-29 Score=216.61 Aligned_cols=193 Identities=14% Similarity=0.242 Sum_probs=142.7
Q ss_pred CCCccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhh-C-CCCccEEEecccCccc
Q psy1547 5 IPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNK-E-SISLEHIVLSHWHNDH 82 (216)
Q Consensus 5 ~~~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~-~-~~~i~~v~~TH~H~DH 82 (216)
...+.+|++|||.+.+. ...|||+|+++++++|||||... ...+.+.+.+.+ . +.+|++|++||.|+||
T Consensus 104 ~~~l~~V~~gVy~i~g~-------~~~N~ylI~~~~g~iLIDtG~~~--~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH 174 (658)
T 2cfu_A 104 KYGLFEVAEGIYQVRGF-------DLANITFIRGDSGWIVVDTLTTP--ATARAAYELVSRELGERPIRTVIYSHAHADH 174 (658)
T ss_dssp CCEEEEEETTEEEEESS-------SSSCEEEEECSSSEEEECCCSSH--HHHHHHHHHHHHHHCCCCEEEEECSBSCHHH
T ss_pred cCCcEEEeCCEEEEecC-------CCeEEEEEEECCEEEEEECCCCH--HHHHHHHHHHHhhCCCCCceEEEECCCChhh
Confidence 34678999999999753 24899999999999999999873 222333333332 2 4689999999999999
Q ss_pred cCChHHHHhh----cCCCcceEeccCCCCccc----------------ccccCCC---------------------CCCC
Q psy1547 83 VGGLKDIFEH----INPDSATIWKFKGTEKDE----------------AQATDFV---------------------PENK 121 (216)
Q Consensus 83 ~gg~~~~~~~----~~~~~~~i~~~~~~~~~~----------------~~~~~~~---------------------~~~~ 121 (216)
+||+..|.+. ++ .++|++++...... ..++... ....
T Consensus 175 ~GG~~~l~~~~~~~~~--~a~V~a~~~~~~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~ 252 (658)
T 2cfu_A 175 FGGVRGLVEPQQVASG--AVQIIAPAGFMEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLA 252 (658)
T ss_dssp HTTGGGTCCHHHHHTT--SSEEEEETTHHHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCC
T ss_pred hCCHHHHHhhhhccCC--CCEEEEchhHHHHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCC
Confidence 9999998763 23 27888876531100 0111100 0112
Q ss_pred ceeec-CCCCeEEECCeeEEEEeCCCC-CCCceEEEECCCcEEEEcceecCCCccc-------cccHHHHHHHHHHHHcC
Q psy1547 122 TVQTL-TDGQLLKVEGATLRVIHTPGH-TTDHIVLKLEEENVVFSGDTILGEGTTV-------FSDLISYIESLRRIRSL 192 (216)
Q Consensus 122 ~~~~~-~~~~~~~~g~~~i~~~~~pgH-t~~~~~~~~~~~~vl~~GD~~~~~~~~~-------~~~~~~~~~~l~~l~~~ 192 (216)
+...+ ++|+++.+||.+++++++||| |+|++++++++.++||+||+++...... ..+..+|.++|++++++
T Consensus 253 p~~~~~~dG~~l~lgg~~l~vi~tPGHhTpg~i~~~~p~~~vLftGD~v~~~~~~i~~~~g~~~~d~~~~~~sL~~l~~l 332 (658)
T 2cfu_A 253 PTRLIEGEGEDLVLDGVPFTFQNTPGTESPAEMNIWLPRQKALLMAENVVGTLHNLYTLRGAEVRDALGWSKYINQALHR 332 (658)
T ss_dssp CSEEECTTEEEEEETTEEEEEEECTTSSSSSBEEEEETTTTEEECTTTSCSSCCCSSCTTCCCCCCHHHHHHHHHHHHHH
T ss_pred CcEEEecCceEEEECCEEEEEEeCCCCCCCCcEEEEECCCCEEEEeccccccCCccccCCCcccCCHHHHHHHHHHHHHH
Confidence 34556 588999999999999999998 9999999999999999999887543211 24788999999988776
Q ss_pred ---CCCeEEcCCCccccCc
Q psy1547 193 ---KPDIIYPAHGPVVEVG 208 (216)
Q Consensus 193 ---~~~~v~pgHg~~~~~~ 208 (216)
++++++||||.++.+.
T Consensus 333 ~~l~~~~v~PGHg~p~~g~ 351 (658)
T 2cfu_A 333 FGRQAEVMFAVHNWPRWGN 351 (658)
T ss_dssp TGGGCSEEECSSSCCEESH
T ss_pred hCCCCcEEEeCCCCccCCH
Confidence 8889999999988663
No 29
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.96 E-value=5.4e-29 Score=205.82 Aligned_cols=198 Identities=19% Similarity=0.259 Sum_probs=142.6
Q ss_pred CccccccceEEeccCCCC--c----c-CCCCceEEEEecCCceEEEecCCCCChh-HHHHHHHHHhh-CCCCccEEEecc
Q psy1547 7 NVSQLSSRVIRVLGMNPG--P----M-TLQGTNTYILGTGSRRLLLDTGEPDHME-YIENLKQVLNK-ESISLEHIVLSH 77 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~--~----~-~~~~~n~~li~~~~~~iliD~g~~~~~~-~~~~~~~~l~~-~~~~i~~v~~TH 77 (216)
++++|+++||++....+. . . .....|||+|+++++.+|||||...... ..+.+.+.+.+ .+.+|++|++||
T Consensus 4 ~~~~i~~~v~~~~~~~~~~~~f~~~~~~g~~~n~~li~~~~~~iLiD~g~~~~~~~~~~~l~~~~~~~~~~~i~~ii~TH 83 (404)
T 2ohh_A 4 AAKRISDGVYWTGVLDWDLRNYHGYTLQGTTYNAYLVCGDEGVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNH 83 (404)
T ss_dssp CCEEEETTEEECCEEETTCCEETTEECSCEEECCEEEECSSCEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSC
T ss_pred eeEEeeCCeEEEEeccCCccccceecCCCCeEEEEEEEeCCcEEEEeCCCCccHHHHHHHHHHHhccCCccCCCEEEeCC
Confidence 577899999999643221 0 0 0113689999998889999999864332 23333332200 256899999999
Q ss_pred cCccccCChHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCC-CCCCCceEEEE
Q psy1547 78 WHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTP-GHTTDHIVLKL 156 (216)
Q Consensus 78 ~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p-gHt~~~~~~~~ 156 (216)
.|+||++|+..+.++++. +++++++.......... ..+...+...+++|+.+.+|+.+++++++| ||++|++++++
T Consensus 84 ~H~DH~gg~~~l~~~~p~--~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~g~~~i~~~~~p~gH~~~~~~~~~ 160 (404)
T 2ohh_A 84 VEKDHSGVLVELHRRFPE--APIYCTEVAVKGLLKHY-PSLREAEFMTVKTGDVLDLGGKTLTFLETPLLHWPDSMFTLL 160 (404)
T ss_dssp CSHHHHTTHHHHHHHSTT--CCEEECHHHHHHHHHHC-GGGGGSCEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEE
T ss_pred CCCcccchHHHHHHHCCC--CEEEECHHHHHHHHHHh-cccccCCceEcCCCCEEEECCEEEEEEeCCCCCCCCceEEEE
Confidence 999999999999998753 67887764432211110 001123567889999999999999999999 89999999999
Q ss_pred CCCcEEEEccee--cCCCccccc----------------------cHHHHHHHHHHHHcCCC----CeEEcCCCccccC
Q psy1547 157 EEENVVFSGDTI--LGEGTTVFS----------------------DLISYIESLRRIRSLKP----DIIYPAHGPVVEV 207 (216)
Q Consensus 157 ~~~~vl~~GD~~--~~~~~~~~~----------------------~~~~~~~~l~~l~~~~~----~~v~pgHg~~~~~ 207 (216)
++.++||+||++ +......+. ...+++++++++.++++ ++++||||.++.+
T Consensus 161 ~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~~~~~i~pgHg~~~~~ 239 (404)
T 2ohh_A 161 DEDGILFSNDAFGQHLCCPQRLDREIPEYILMDAARKFYANLITPLSKLVLKKFDEVKELGLLERIQMIAPSHGQIWTD 239 (404)
T ss_dssp ETTTEEECTTTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCGGGCSEEECSSSCBBSS
T ss_pred CCCcEEEecCccccCcCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccEEecCCCccccC
Confidence 999999999987 321111111 12466899999999999 8999999999874
No 30
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.96 E-value=3e-28 Score=194.60 Aligned_cols=165 Identities=18% Similarity=0.347 Sum_probs=126.0
Q ss_pred CceEEEEec--CCceEEEecCCCCChhHHHHHHHHHhhCC-----CCccEEEecccCccccCChHHHHhhcCCC----cc
Q psy1547 30 GTNTYILGT--GSRRLLLDTGEPDHMEYIENLKQVLNKES-----ISLEHIVLSHWHNDHVGGLKDIFEHINPD----SA 98 (216)
Q Consensus 30 ~~n~~li~~--~~~~iliD~g~~~~~~~~~~~~~~l~~~~-----~~i~~v~~TH~H~DH~gg~~~~~~~~~~~----~~ 98 (216)
..|||+|.+ +++.+|||||... ....+.+.+.+...+ .+|++|++||.|+||++|+..|.++++.. .+
T Consensus 39 ~n~~ylI~~~~~~~~ilID~G~~~-~~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~~~ 117 (311)
T 2p18_A 39 DNFSYLINDHTTHTLAAVDVNADY-KPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLKAELEAMNSTVPV 117 (311)
T ss_dssp TEEEEEEEETTTTEEEEESCCSCC-HHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHHHHHHSCC--CCC
T ss_pred CcEEEEEEeCCCCcEEEEeCCCCh-HHHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHHHHHhhhhcccCCCC
Confidence 356999998 5789999998543 223333333322225 68999999999999999999999987311 26
Q ss_pred eEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEE--CC---C-cEEEEcceecCCC
Q psy1547 99 TIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKL--EE---E-NVVFSGDTILGEG 172 (216)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~--~~---~-~vl~~GD~~~~~~ 172 (216)
+++.++... .+ .....+++|+.+.+|+.+++++++||||+|++++++ ++ . ++||+||+++...
T Consensus 118 ~v~~~~~~~---------~~--~~~~~l~~g~~l~lg~~~l~vi~tPGHT~g~i~~~~~~~~~~~~~~~lftGD~l~~~~ 186 (311)
T 2p18_A 118 VVVGGANDS---------IP--AVTKPVREGDRVQVGDLSVEVIDAPCHTRGHVLYKVQHPQHPNDGVALFTGDTMFIAG 186 (311)
T ss_dssp EEEEEGGGT---------CT--TCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECTTCGGGCEEEEEETTEETTE
T ss_pred EEEEechhc---------CC--CCceEeCCCCEEEECCeEEEEEECCCCCcccEEEEEecCCcCCcCCEEEEcCccccCC
Confidence 777765331 11 245678999999999999999999999999999999 45 6 8999999988653
Q ss_pred cc--ccccHHHHHHHHHHHHcC--------CCC-eEEcCCCcccc
Q psy1547 173 TT--VFSDLISYIESLRRIRSL--------KPD-IIYPAHGPVVE 206 (216)
Q Consensus 173 ~~--~~~~~~~~~~~l~~l~~~--------~~~-~v~pgHg~~~~ 206 (216)
.. +..+..+|+++++++.++ +.+ +++||||++.+
T Consensus 187 ~g~~~~~~~~~~~~Sl~kl~~l~~~~~~~~~~~~~v~pgHg~~~~ 231 (311)
T 2p18_A 187 IGAFFEGDEKDMCRAMEKVYHIHKGNDYALDKVTFIFPGHEYTSG 231 (311)
T ss_dssp ECCCTTSCHHHHHHHHHHHHTTTGGGTTGGGGGEEEEESBCCHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHhhhcccccCCCCeEEEeCCCchhh
Confidence 32 236899999999999999 676 79999997764
No 31
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.96 E-value=6.1e-28 Score=203.43 Aligned_cols=166 Identities=22% Similarity=0.327 Sum_probs=131.3
Q ss_pred CCceEEEE--ecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCC
Q psy1547 29 QGTNTYIL--GTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGT 106 (216)
Q Consensus 29 ~~~n~~li--~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~ 106 (216)
.++|||+| +.+++++|||||... +.+.+.+.+.+.+|++|++||.|.||++|+..+.+++. ++++.++..
T Consensus 14 ~~~n~yli~~~~~~~~ilID~g~~~-----~~~~~~l~~~~~~i~~Il~TH~H~DH~gg~~~l~~~~~---~~i~~~~~~ 85 (474)
T 3tp9_A 14 LAHASYLVGCQETGEACVIDPARDV-----EPYLLTAKREGLRIVAALETHIHADFVSGAREMADRAG---AAICVSDEG 85 (474)
T ss_dssp TTEEEEEEEETTTCEEEEESCCSCC-----HHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHHC---CEEEEECCS
T ss_pred ceeEEEEEEECCCCEEEEEcCCCCh-----HHHHHHHHHcCCeeEEEEcCcCchhhhCCHHHHHHHHC---CcEEEcCcc
Confidence 36899999 778899999999763 44555666667789999999999999999999999875 788887765
Q ss_pred CcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCC-------cEEEEcceecCCCccc--c-
Q psy1547 107 EKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEE-------NVVFSGDTILGEGTTV--F- 176 (216)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~-------~vl~~GD~~~~~~~~~--~- 176 (216)
...... ......+...+++|+.+.+|+.+++++++||||+|++++++++. +++|+||+++...... +
T Consensus 86 ~~~~~~---~~~~~~~~~~~~~g~~~~~g~~~i~~i~tPGHt~g~~~~~~~~~~~~~~~~~~lftGD~lf~~~~g~~dl~ 162 (474)
T 3tp9_A 86 PPEWKS---EYVKAYPHRLLKDGDELHFGNVRIVVMHTPGHTPEHVSYLLYDGKTSPDVPMALFSGDFVFVGDVGRPDLL 162 (474)
T ss_dssp CGGGCC---GGGGGSSEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEEETTTEEEEEEEEEEETSEETTEECCSCHH
T ss_pred hhhhcc---cccccccceECCCCCEEEECCEEEEEEECCCCCCCCEEEEEecCCCCCCCceEEEeCCccccCCCCCCCCC
Confidence 433211 11122345789999999999999999999999999999999743 6999999987654322 1
Q ss_pred -----------ccHHHHHHHHHHHHcCCCC-eEEcCCCccc
Q psy1547 177 -----------SDLISYIESLRRIRSLKPD-IIYPAHGPVV 205 (216)
Q Consensus 177 -----------~~~~~~~~~l~~l~~~~~~-~v~pgHg~~~ 205 (216)
.+..+++++|+++.+++.+ +|+||||...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~~v~PgHg~~s 203 (474)
T 3tp9_A 163 ERVAGESGSSEALARQMFRSLRKFEALPDHVQVLPAHGAGS 203 (474)
T ss_dssp HHHSCCTTHHHHHHHHHHHHHHHHHTSCTTCEEEESBCTTC
T ss_pred ccccCCCccchHHHHHHHHHHHHHhcCCCCcEEECCCCCCc
Confidence 1267899999999999988 5889999554
No 32
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.96 E-value=1.5e-28 Score=203.14 Aligned_cols=192 Identities=21% Similarity=0.291 Sum_probs=142.0
Q ss_pred CccccccceEEeccCCC----------CccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhC--CCCccEEE
Q psy1547 7 NVSQLSSRVIRVLGMNP----------GPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKE--SISLEHIV 74 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~----------~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~--~~~i~~v~ 74 (216)
.+++|.++||++..... .+. ....|||+|+ +++.+|||||.... .+.+.+.+.+. ..+|++|+
T Consensus 2 ~~~~i~~~v~~v~~~d~~~~~f~~~~~~~~-g~~~n~~li~-~~~~iliD~G~~~~---~~~~~~~l~~~~~~~~i~~ii 76 (402)
T 1e5d_A 2 QATKIIDGFHLVGAIDWNSRDFHGYTLSPM-GTTYNAYLVE-DEKTTLFDTVKAEY---KGELLCGIASVIDPKKIDYLV 76 (402)
T ss_dssp CCEEEETTEEEEEEEETTCCEETTTEECTT-CEEEEEEEEC-SSSCEEECCCCGGG---HHHHHHHHHTTSCGGGCCEEE
T ss_pred CceEeeCCeEEEEeccCCcccccCCCcCCC-CcceEEEEEE-CCCEEEEeCCCCcc---HHHHHHHHHHhCCcccCCEEE
Confidence 67899999999964311 111 1247899999 46799999998632 24445555544 45799999
Q ss_pred ecccCccccCChHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCC-CCCCCceE
Q psy1547 75 LSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTP-GHTTDHIV 153 (216)
Q Consensus 75 ~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p-gHt~~~~~ 153 (216)
+||.|+||++|+..+.++++. +++++++........... .+ ..+...+++|+.+.+|+.+++++++| ||++|+++
T Consensus 77 iTH~H~DH~gg~~~l~~~~~~--~~v~~~~~~~~~~~~~~~-~~-~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~ 152 (402)
T 1e5d_A 77 IQHLELDHAGALPALIEACQP--EKIFTSSLGQKAMESHFH-YK-DWPVQVVKHGETLSLGKRTVTFYETRMLHWPDSMV 152 (402)
T ss_dssp ECCCSHHHHTTHHHHHHHHCC--SEEEEEHHHHHHHHHHHC-CS-SCCEEEECTTCEEECSSCEEEEEECTTSSSTTCEE
T ss_pred eCCCCccccccHHHHHHHCCC--CEEEEChHHHHHHHHHhC-CC-CCceEEcCCCCEEEECCCEEEEEeCCCCCCCCcEE
Confidence 999999999999999998753 688887654332211100 11 24577899999999999999999999 99999999
Q ss_pred EEECCCcEEEEcceecCCCcc--cccc----------------------HHHHHHHHHHHHc--CCCCeEEcCCCccccC
Q psy1547 154 LKLEEENVVFSGDTILGEGTT--VFSD----------------------LISYIESLRRIRS--LKPDIIYPAHGPVVEV 207 (216)
Q Consensus 154 ~~~~~~~vl~~GD~~~~~~~~--~~~~----------------------~~~~~~~l~~l~~--~~~~~v~pgHg~~~~~ 207 (216)
+++++++++|+||++...... .+.+ ...+.++++++.+ +++++++||||.++++
T Consensus 153 ~~~~~~~~l~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~~i~p~Hg~~~~~ 232 (402)
T 1e5d_A 153 SWFADEKVLISNDIFGQNIAASERFSDQIPVHTLERAMREYYANIVNPYAPQTLKAIETLVGAGVAPEFICPDHGVIFRG 232 (402)
T ss_dssp EEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBEES
T ss_pred EEECCCCEEEecccccCccccccccccccchhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhCCCCcCEEecCCcceeec
Confidence 999999999999985432211 1211 2344688999999 8999999999999873
No 33
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.96 E-value=2.2e-28 Score=202.91 Aligned_cols=193 Identities=19% Similarity=0.149 Sum_probs=139.3
Q ss_pred CccccccceEEeccCCCC-------ccC-CCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhC--CCCccEEEec
Q psy1547 7 NVSQLSSRVIRVLGMNPG-------PMT-LQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKE--SISLEHIVLS 76 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~~-------~~~-~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~--~~~i~~v~~T 76 (216)
.+.+|+++||++....+. +.. ....|||+|++ ++.+|||||..... +.+.+.+.+. ..+|++|++|
T Consensus 9 ~~~~i~~~v~~v~~~~~~~~~f~~~~~~~g~~~n~~li~~-~~~iLID~G~~~~~---~~~~~~l~~~~~~~~i~~ii~T 84 (414)
T 2q9u_A 9 QDQEMIPGVYWVGIVDWMVRIFHGYHTDEGSSYNSYFIDD-ECPTVIDSVKYPFA---EEWLSRIAACCPLDKIKYVVMN 84 (414)
T ss_dssp CCCEEETTEEECCEEESSCCEETTEECTTCEEECCEEECS-SSCEEECCCCGGGH---HHHHHHHHHHSCGGGCCEEECS
T ss_pred eeEEeeCCeEEEEEeeCCccccccccCCCCcceeEEEEEC-CCEEEEeCCCcccH---HHHHHHHHHhcCcccCCEEEeC
Confidence 467899999998542111 011 11478999996 77999999985322 2233333322 3579999999
Q ss_pred ccCccccCChHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCC-CCCCCceEEE
Q psy1547 77 HWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTP-GHTTDHIVLK 155 (216)
Q Consensus 77 H~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p-gHt~~~~~~~ 155 (216)
|.|+||+||+..+.++++. +++++++........... ....+...+++|+.+.+|+.+++++++| ||++|+++++
T Consensus 85 H~H~DH~gg~~~l~~~~~~--~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~lg~~~~~~~~~p~gHt~~~~~~~ 160 (414)
T 2q9u_A 85 HAEGDHASSLKDHYHKFTN--ATFVCTKKCQEHLKILYG--MEKATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTY 160 (414)
T ss_dssp CCSGGGTTTHHHHGGGSTT--CEEEECHHHHHHHHHHHC--CTTCCEEECCTTCCEECSSCEEEEEECTTSSSTTCEEEE
T ss_pred CCCcchhcCHHHHHHHCCC--CEEEECHHHHHHHHHHhC--CCCCeeEEeCCCCEEEECCeEEEEEeCCCCCCCCceEEE
Confidence 9999999999999988753 788887654332211100 0123567889999999999999999999 9999999999
Q ss_pred ECCCcEEEEcceecCCCc--cccc----------------------cHHHHHHHHHHHHcCCCCeEEcCCCccccC
Q psy1547 156 LEEENVVFSGDTILGEGT--TVFS----------------------DLISYIESLRRIRSLKPDIIYPAHGPVVEV 207 (216)
Q Consensus 156 ~~~~~vl~~GD~~~~~~~--~~~~----------------------~~~~~~~~l~~l~~~~~~~v~pgHg~~~~~ 207 (216)
.++.++||+||++..... ..+. ...++.++++++.++++++++||||.++.+
T Consensus 161 ~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~i~pgHg~~~~~ 236 (414)
T 2q9u_A 161 CPEDKILFSNDGFGQHYATSRRWADECDVSHVMHLFKEYTANILGLFSAQMRKALEVASTVEIKYILSAHGVSWRG 236 (414)
T ss_dssp ETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCSEEEESSSCBEEH
T ss_pred ECCCeEEEEccccccccCcccccccccchhhHHHHHHHHHHHheehHHHHHHHHHHHHhCCCCCEEECCCcCeecC
Confidence 999999999996543211 1111 124567999999999999999999998864
No 34
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.96 E-value=1.3e-28 Score=202.80 Aligned_cols=192 Identities=19% Similarity=0.214 Sum_probs=138.3
Q ss_pred CCcccccc--ceEEeccCCCCcc------C-CCC--ceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhC--CCCccE
Q psy1547 6 PNVSQLSS--RVIRVLGMNPGPM------T-LQG--TNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKE--SISLEH 72 (216)
Q Consensus 6 ~~~~~v~~--~v~~v~~~~~~~~------~-~~~--~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~--~~~i~~ 72 (216)
-.++||.+ +||+|....+... + -+| .|||||.++++++|||||.... .+.+.+.+.+. +.+|++
T Consensus 16 ~~~~ki~d~p~iy~vg~~d~~~~~Fe~~~~~~~GtsyNsYLI~~~~~~vLIDtg~~~~---~~~~l~~l~~~i~~~~Idy 92 (410)
T 4dik_A 16 IWTERIFDDPEIYVLRIDDDRIRYFEAVWEIPEGISYNAYLVKLNGANVLIDGWKGNY---AKEFIDALSKIVDPKEITH 92 (410)
T ss_dssp EEEEEEETTTEEEEEEEEECSCCEETTTEECTTCEEEEEEEEECSSCEEEECCCCGGG---HHHHHHHHTTTSCGGGCCE
T ss_pred ceEEEEecCCCEEEEeeecCCCcceeeeeeCCCceEEEEEEEEECCeEEEEeCCCcch---HHHHHHHHHHhcCcccCCE
Confidence 34678887 5999853322110 0 112 5999999999999999996532 34444444442 347999
Q ss_pred EEecccCccccCChHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCC-CCCCc
Q psy1547 73 IVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPG-HTTDH 151 (216)
Q Consensus 73 v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pg-Ht~~~ 151 (216)
|++||.|+||+|++..+.+++++ .+++++++......... ........+++|+++++|+.+++++++|| |+|++
T Consensus 93 Ii~TH~h~DH~G~l~~l~~~~~~-~~~v~~s~~~~~~l~~~----~~~~~~~~v~dGd~l~lG~~~L~~i~tPg~H~p~~ 167 (410)
T 4dik_A 93 IIVNHTEPDASGSLPATLKTIGH-DVEIIASNFGKRLLEGF----YGIKDVTVVKDGEEREIGGKKFKFVMTPWLHWPDT 167 (410)
T ss_dssp EECSCCCHHHHTTHHHHHHHHCS-CCEEEECHHHHHHHHHH----HCCCCEEECCTTCEEEETTEEEEEEECTTSSSTTC
T ss_pred EEeCcCCcchhhhHHHHHHHcCC-CCEEEeCHHHHHHHHhh----cCccceeEecCCCEEeecceEEEEecCCCCCCCCC
Confidence 99999999999999999988753 26777766443322211 11235788999999999999999999999 99999
Q ss_pred eEEEECCCcEEEEcceecCCCccc--c-----------------------ccHHHHHHHHHHHHcCCCCeEEcCCCcccc
Q psy1547 152 IVLKLEEENVVFSGDTILGEGTTV--F-----------------------SDLISYIESLRRIRSLKPDIIYPAHGPVVE 206 (216)
Q Consensus 152 ~~~~~~~~~vl~~GD~~~~~~~~~--~-----------------------~~~~~~~~~l~~l~~~~~~~v~pgHg~~~~ 206 (216)
++++. +++||+||++....... . ....+++++|+++.++++++++|+||++++
T Consensus 168 ~~~y~--~~iLFsgD~fg~h~~~~~~~d~~~~~~e~~~~~~~~yy~~i~~p~~~~v~~~L~kl~~Ldi~~I~P~HGpi~r 245 (410)
T 4dik_A 168 MVTYL--DGILFSCDVGGGYLLPEILDDSNESVVERYLPHVTKYIVTVIGHYKNYILEGAEKLSSLKIKALLPGHGLIWK 245 (410)
T ss_dssp EEEEE--TTEEEEETTTCCSSCCSSSBTTCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHTSCCSEEEESSSCBBS
T ss_pred eeEEe--CCceEccccccccccCccccccchhhHHHHHHHHHHHHHhhccchHHHHHHHHHHHhCCCCCEEecCCcchhh
Confidence 99997 58999999653221110 0 012344678999999999999999999986
Q ss_pred C
Q psy1547 207 V 207 (216)
Q Consensus 207 ~ 207 (216)
+
T Consensus 246 ~ 246 (410)
T 4dik_A 246 K 246 (410)
T ss_dssp S
T ss_pred c
Confidence 4
No 35
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.96 E-value=1.4e-27 Score=200.60 Aligned_cols=164 Identities=23% Similarity=0.374 Sum_probs=130.0
Q ss_pred CCceEEEE--ecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCC
Q psy1547 29 QGTNTYIL--GTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGT 106 (216)
Q Consensus 29 ~~~n~~li--~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~ 106 (216)
.++|||+| +.+++++|||||... +.+.+.+.+.+.+|++|++||.|.||++|+..+.+++. ++++.++..
T Consensus 35 ~~~nsyli~~~~~~~~vlID~g~~~-----~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~---a~v~~~~~~ 106 (466)
T 3r2u_A 35 LSQASYLIGCQKTGEAMIIDPIRDL-----SSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKLN---ANIYVSGES 106 (466)
T ss_dssp TTEEEEEEEETTTCEEEEESCCSCC-----HHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHHC---CEEEEECCS
T ss_pred ccceEEEEEeCCCCEEEEEcCCCCH-----HHHHHHHHHCCCeeeEEEECCCChhhhccHHHHHHhhC---CeEEECcch
Confidence 46899999 467889999999653 34555566667789999999999999999999999875 788887754
Q ss_pred CcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCCc-------EEEEcceecCCCccc--c-
Q psy1547 107 EKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEEN-------VVFSGDTILGEGTTV--F- 176 (216)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~~-------vl~~GD~~~~~~~~~--~- 176 (216)
...... ... ......+++|+++.+|+.+++++++||||+|++++++++.+ ++|+||+++.+.... +
T Consensus 107 ~~~~~~---~~~-~~~~~~~~~g~~l~~g~~~l~vi~tPGHT~g~~~~~~~~~~~~~~~~~~lftGD~lf~~~~gr~dl~ 182 (466)
T 3r2u_A 107 DDTLGY---KNM-PNHTHFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAQVPMGLFSGDFIFVGDIGRPDLL 182 (466)
T ss_dssp CTTTSC---CSC-CTTCEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECGGGTCCSCCEEEEETTBCSSCBCCCCCC
T ss_pred hhhhcc---ccC-CCCCEEeCCCCEEEECCEEEEEEECCCCCCCCEEEEEcCCCccCCCceEEEECCcccCCCCCCcCcc
Confidence 332211 111 12678899999999999999999999999999999998654 999999988653221 1
Q ss_pred -----------ccHHHHHHHHHHHHcCCCC-eEEcCCCcc
Q psy1547 177 -----------SDLISYIESLRRIRSLKPD-IIYPAHGPV 204 (216)
Q Consensus 177 -----------~~~~~~~~~l~~l~~~~~~-~v~pgHg~~ 204 (216)
.+..++.+||+++.+++.+ +|+||||..
T Consensus 183 ~~~~~~~g~~~~~~~~~~~Sl~kl~~L~~~~~v~PgHg~~ 222 (466)
T 3r2u_A 183 EKAVKVEGSSEIGAKQMFKSIESIKDLPDYIQIWPGHGAG 222 (466)
T ss_dssp CGGGCCTTHHHHHHHHHHHHHHHHTTSCTTCEEEESBCTT
T ss_pred ccccccCCCchHHHHHHHHHHHHHhcCCCCeEEECCCCCC
Confidence 1378999999999999988 699999944
No 36
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.95 E-value=3.7e-28 Score=200.43 Aligned_cols=193 Identities=19% Similarity=0.190 Sum_probs=140.1
Q ss_pred CccccccceEEeccCCC---------CccC-CCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhC--CCCccEEE
Q psy1547 7 NVSQLSSRVIRVLGMNP---------GPMT-LQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKE--SISLEHIV 74 (216)
Q Consensus 7 ~~~~v~~~v~~v~~~~~---------~~~~-~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~--~~~i~~v~ 74 (216)
++++|+++||++..... .+.. ....|||+|++ ++.+|||||..... +.+.+.+.+. ..+|++|+
T Consensus 2 ~~~~i~~~v~~v~~~d~~~~~f~~~~~~~~~g~~~n~~li~~-~~~iliD~g~~~~~---~~~~~~l~~~~~~~~i~~ii 77 (398)
T 1ycg_A 2 QPVAITDGIYWVGAVDWNIRYFHGPAFSTHRGTTYNAYLIVD-DKTALVDTVYEPFK---EELIAKLKQIKDPVKLDYLV 77 (398)
T ss_dssp CCEEEETTEEECCEEESSCCEETTTTEECTTCEEECCEEECS-SSCEEECCCCGGGH---HHHHHHHHHHCSSCCCSEEE
T ss_pred CceEEeCCEEEEEeecCCcccccceeccCCCCeeEEEEEEEC-CCEEEEeCCCcccH---HHHHHHHHHhcCcccCCEEE
Confidence 46789999999953311 0111 12478999996 46999999986322 3333333332 56899999
Q ss_pred ecccCccccCChHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCC-CCCCCceE
Q psy1547 75 LSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTP-GHTTDHIV 153 (216)
Q Consensus 75 ~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p-gHt~~~~~ 153 (216)
+||.|+||++|+..+.++++. +++++++.......... .. ...+...+++|+.+.+|+.+++++++| ||++|+++
T Consensus 78 iTH~H~DH~gg~~~l~~~~~~--~~v~~~~~~~~~l~~~~-~~-~~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~ 153 (398)
T 1ycg_A 78 VNHTESDHAGAFPAIMELCPD--AHVLCTQRAFDSLKAHY-SH-IDFNYTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMF 153 (398)
T ss_dssp ESCCSHHHHTTHHHHHHHCTT--CEEEECHHHHHHHHHHT-CS-CCCEEEECCTTCEEECSSCEEEEEECTTSSSTTCEE
T ss_pred eCCCCcchhhhHHHHHHHCCC--CEEEEcHHHHHHHHHHh-CC-CCcceEEeCCCCEEeeCCcEEEEEeCCCCCCCCcEE
Confidence 999999999999999998753 68888765433221110 01 124577889999999999999999999 89999999
Q ss_pred EEECCCcEEEEcceecCCCcc--ccc----------------------cHHHHHHHHHHHHc--CCCCeEEcCCCccccC
Q psy1547 154 LKLEEENVVFSGDTILGEGTT--VFS----------------------DLISYIESLRRIRS--LKPDIIYPAHGPVVEV 207 (216)
Q Consensus 154 ~~~~~~~vl~~GD~~~~~~~~--~~~----------------------~~~~~~~~l~~l~~--~~~~~v~pgHg~~~~~ 207 (216)
+++++.+++|+||++...... .+. ....+.++++++.+ +++++++||||.++.+
T Consensus 154 ~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~l~~l~~~~l~~~~i~p~Hg~~~~~ 233 (398)
T 1ycg_A 154 TYVPEEALLLPNDAFGQHIATSVRFDDQVDAGLIMDEAAKYYANILMPFSNLITKKLDEIQKINLAIKTIAPSHGIIWRK 233 (398)
T ss_dssp EEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBBCS
T ss_pred EEECCCcEEEeccccccccCccccccccccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhCCCCccEEECCCchhhhC
Confidence 999999999999985432211 121 12344789999999 9999999999998863
No 37
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.95 E-value=8.4e-27 Score=181.88 Aligned_cols=181 Identities=23% Similarity=0.345 Sum_probs=136.4
Q ss_pred ccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHh
Q psy1547 12 SSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFE 91 (216)
Q Consensus 12 ~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~ 91 (216)
.+++|++....++. .+..|||+|.++++.+|||||....... + +. ..+|++|++||.|+||++|+..+.+
T Consensus 3 ~~~i~~i~~~~~g~--~~~~~~~li~~~~~~iLiD~G~~~~~~~---l----~~-~~~i~~vi~TH~H~DH~gg~~~l~~ 72 (261)
T 3adr_A 3 CRGLHSIPAGPVEF--PEIATVYVMCGEKLTVMIDAGVSNSIAD---F----SF-LDKLDYIVLTHLHIDHIGLLPELLQ 72 (261)
T ss_dssp CCEEEEEECSCTTC--GGGSEEEEEECSSCEEEECCCCTTCCCC---C----TT-CSCCCEEECSCCSGGGTTTHHHHHH
T ss_pred CCCeEEEeccCCCC--CCceEEEEEEcCCcEEEEeCCCCCChhh---c----CC-CCCCcEEEECCCCccccCCHHHHHH
Confidence 47888886432322 2458999998878899999998753211 1 22 4589999999999999999999998
Q ss_pred hcCCCcceEeccCCCCccccc---------------------ccCC-CC-CCCceeecCCCCeEEECCeeEEEEeCCCCC
Q psy1547 92 HINPDSATIWKFKGTEKDEAQ---------------------ATDF-VP-ENKTVQTLTDGQLLKVEGATLRVIHTPGHT 148 (216)
Q Consensus 92 ~~~~~~~~i~~~~~~~~~~~~---------------------~~~~-~~-~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt 148 (216)
++. +++++++........ +... .+ .......+++++.+.+|+.+++++++|||+
T Consensus 73 ~~~---~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt 149 (261)
T 3adr_A 73 VYK---AKVLVKSGFKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHA 149 (261)
T ss_dssp HSC---CEEEEETTCTHHHHSHHHHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECSSSEEEEEECTTSC
T ss_pred HhC---CeEEECHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEECCEEEEEEECCCCC
Confidence 863 788887765432110 1110 11 112456789999999999999999999999
Q ss_pred CCceEEEECCCcEEEEcceecCCC-------ccccccHHHHHHHHHHHHcCCCCeEEcCCCccccC
Q psy1547 149 TDHIVLKLEEENVVFSGDTILGEG-------TTVFSDLISYIESLRRIRSLKPDIIYPAHGPVVEV 207 (216)
Q Consensus 149 ~~~~~~~~~~~~vl~~GD~~~~~~-------~~~~~~~~~~~~~l~~l~~~~~~~v~pgHg~~~~~ 207 (216)
+|++++.+ ++++|+||+++... .....+..+|.++++++.+++++.++|+|+.+..+
T Consensus 150 ~~~~~~~~--~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~v~~~H~~~~~~ 213 (261)
T 3adr_A 150 RHHMSVLV--DDFLFTGDSAGAYFNGVVIPTTPPVIDYKMYMESLKRQIELKPKVVGFAHGGLVSP 213 (261)
T ss_dssp TTCEEEEE--TTEEEEETSSCEEETTEEECCCCSCCCHHHHHHHHHHHHHTCCSEEEETTTEEECT
T ss_pred CccEEEEE--CCEEEEcCcccccccccccCCCCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCccCC
Confidence 99999986 68999999875421 11236789999999999999999999999998874
No 38
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=99.91 E-value=1.7e-29 Score=218.63 Aligned_cols=194 Identities=18% Similarity=0.210 Sum_probs=141.3
Q ss_pred CCCccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhh--CCCCccEEEecccCccc
Q psy1547 5 IPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNK--ESISLEHIVLSHWHNDH 82 (216)
Q Consensus 5 ~~~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~--~~~~i~~v~~TH~H~DH 82 (216)
...+.+|++|||.+++. ...|||+|.++++++|||||..... .+.+.+.+.+ .+.+|++|++||.|+||
T Consensus 114 ~~~l~eV~~gVy~i~g~-------~~~N~~lI~~~~~~iLIDtG~~~~~--a~~~l~~i~~~~~~~~I~~IilTH~H~DH 184 (668)
T 2yhe_A 114 IAGLFEVMPKLYQVRGL-------DPANMTIIEGDSGLVLIDTLTTAET--ARAALDLYFQHRPKKPIVAVVYSHSHIDH 184 (668)
Confidence 45678999999999853 2489999999999999999986421 2233333332 14689999999999999
Q ss_pred cCChHHHHhh----cCCCcceEeccCCCCcc----------------cccccCCCC------------------C----C
Q psy1547 83 VGGLKDIFEH----INPDSATIWKFKGTEKD----------------EAQATDFVP------------------E----N 120 (216)
Q Consensus 83 ~gg~~~~~~~----~~~~~~~i~~~~~~~~~----------------~~~~~~~~~------------------~----~ 120 (216)
+||+..+.+. .+ .++|++++...+. ...++...+ . .
T Consensus 185 ~gG~~~l~~~~~~~~~--~a~I~a~~~~~e~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~~~~~~~~~~~ 262 (668)
T 2yhe_A 185 FGGARGIIDEADVKAG--KVKVFAPSGFMEHAVSENILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKTTATNATNTLV 262 (668)
Confidence 9999999863 11 2677776553110 000110000 0 0
Q ss_pred Ccee-ecCCCCeEEECCeeEEEEeCCC-CCCCceEEEECCCcEEEEcceecCCCccc-------cccHHHHHHHHHHHHc
Q psy1547 121 KTVQ-TLTDGQLLKVEGATLRVIHTPG-HTTDHIVLKLEEENVVFSGDTILGEGTTV-------FSDLISYIESLRRIRS 191 (216)
Q Consensus 121 ~~~~-~~~~~~~~~~g~~~i~~~~~pg-Ht~~~~~~~~~~~~vl~~GD~~~~~~~~~-------~~~~~~~~~~l~~l~~ 191 (216)
.+.. ..++|+++.+||.+++++++|| ||+|++++++++.++||+||+++...... ..|..+|+++|+++++
T Consensus 263 ~P~~~~~~dg~~l~lgg~~l~vi~tPG~Htpg~i~~~~p~~~vLftGD~~~~~~~ni~~~~g~~~~d~~~w~~SL~~l~~ 342 (668)
T 2yhe_A 263 APNVLIEKPYERHTVDGVELEFQLTLGSEAPSDMNIYLPQFKVLNTADNAPPAMHNLLTPRGAEVRDAKAWAGYIDASLE 342 (668)
Confidence 1222 2357889999999999999999 99999999999999999999987543211 1478899999999999
Q ss_pred C---CCCeEEcCCCccccCcc
Q psy1547 192 L---KPDIIYPAHGPVVEVGL 209 (216)
Q Consensus 192 ~---~~~~v~pgHg~~~~~~~ 209 (216)
+ ++++++||||.++.+.+
T Consensus 343 l~~~~~~~vvPGHg~p~~g~~ 363 (668)
T 2yhe_A 343 KYGDRTDVLIQQHNWPVWGGD 363 (668)
Confidence 8 78999999999887643
No 39
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.93 E-value=3.7e-27 Score=179.85 Aligned_cols=178 Identities=21% Similarity=0.284 Sum_probs=124.4
Q ss_pred ccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCC---CCccEEEecccCccccCChHH
Q psy1547 12 SSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKES---ISLEHIVLSHWHNDHVGGLKD 88 (216)
Q Consensus 12 ~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~---~~i~~v~~TH~H~DH~gg~~~ 88 (216)
..|.+.+.+. .....+|||+|+++++.+|||||..... +.+.+.+.+.+ .+|++|++||.|+||++|+..
T Consensus 20 ~~g~~~~p~~----~~~~~~n~~li~~~~~~iLID~G~~~~~---~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~ 92 (221)
T 1ztc_A 20 TGGNVFVPGR----LNAHFSTVVYLEHKDRRIIIDPGNLSSM---DELEEKFSELGISPDDITDVLFTHVHLDHIFNSVL 92 (221)
T ss_dssp CCBEEEETTT----EECCBCCEEEEEETTEEEEECCCCGGGH---HHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGG
T ss_pred ecceEEecCC----CCCCceEEEEEEeCCeEEEEECCCCcch---HHHHHHHHHcCCCHHHCcEEEEcCCccccCCchhh
Confidence 3555665432 2235689999999999999999985322 33444444433 378999999999999999988
Q ss_pred HHhhcCCCcceEeccCCCCcc-cccccCC-------CC-CCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECC-
Q psy1547 89 IFEHINPDSATIWKFKGTEKD-EAQATDF-------VP-ENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEE- 158 (216)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~-~~~~~~~-------~~-~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~- 158 (216)
+. .+++++++..... ...+... .+ ...+...+++++.+. ++ .++++++|||++|+++++++.
T Consensus 93 ~~------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-~~-~~~v~~~pGHt~g~~~~~~~~~ 164 (221)
T 1ztc_A 93 FE------NATFYVHEVYKTKNYLSFGTIVGRIYSKVISSWKNVVLLKGEESLF-DE-KVKVFHTPWHAREHLSFLLDTE 164 (221)
T ss_dssp CT------TCEEEEEGGGGGSCGGGGCHHHHHHHHHHHHTCCSEEEECSCCEET-TT-TEEEEECCSSSTTCEEEEEEET
T ss_pred CC------CCEEEEeHHHhhhhhhhhccchhhhhhhccccccceEEeCCCCEEE-CC-eEEEEEcCCCCcccEEEEEEcC
Confidence 75 2577776651110 0000000 00 013456788888775 43 799999999999999999974
Q ss_pred --CcEEEEcceecCCCccccccHHHHHHH------HHHHHcCCCCeEEcCCCccccCc
Q psy1547 159 --ENVVFSGDTILGEGTTVFSDLISYIES------LRRIRSLKPDIIYPAHGPVVEVG 208 (216)
Q Consensus 159 --~~vl~~GD~~~~~~~~~~~~~~~~~~~------l~~l~~~~~~~v~pgHg~~~~~~ 208 (216)
++++|+||+++.... ..+..+|+++ |++ .++ +++++||||++++..
T Consensus 165 ~~~~vlftGD~~~~~~~--~~d~~~~~~s~~~~~~l~~-~~l-~~~i~pgHg~~~~~~ 218 (221)
T 1ztc_A 165 NAGRVLITGDITPNRLS--YYDIIKGYGSVQVKNFLDR-VGR-IDLLVFPHDAPLKPE 218 (221)
T ss_dssp TTEEEEECGGGSCSHHH--HHHHHHTCSCHHHHHHHHH-HCC-CSEEECSSSCCBCCC
T ss_pred CCCeEEEEeCccccccc--CCCHHHHHhhhHhHHHHHh-ccC-CCEEEeCCCchHhhh
Confidence 389999998764332 5677788888 999 777 889999999988654
No 40
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.93 E-value=2.2e-26 Score=178.92 Aligned_cols=171 Identities=23% Similarity=0.295 Sum_probs=118.4
Q ss_pred CCceEEEEecCCceEEEecCCCCCh--------------------hHHHHHHHHHhhCCC---CccEEEecccCccccCC
Q psy1547 29 QGTNTYILGTGSRRLLLDTGEPDHM--------------------EYIENLKQVLNKESI---SLEHIVLSHWHNDHVGG 85 (216)
Q Consensus 29 ~~~n~~li~~~~~~iliD~g~~~~~--------------------~~~~~~~~~l~~~~~---~i~~v~~TH~H~DH~gg 85 (216)
.+.|||+|+++++.+|||||..... ...+.+.+.+.+.+. +|++|++||.|+||++|
T Consensus 37 ~~~~~~lI~~~~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~l~~~g~~~~~I~~VilTH~H~DH~gg 116 (254)
T 3dha_A 37 LPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHAGG 116 (254)
T ss_dssp EEEEEEEEEETTEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGGSHHHHHHHHTCCGGGCSEEECSCCSHHHHTT
T ss_pred EeeEEEEEECCCccEEEECCCChhhhcccccccccccccccccccCchhhHHHHHHHcCCCHHHCCEEEcCCChhhcCCC
Confidence 4589999999999999999986310 001233444444444 49999999999999999
Q ss_pred hHHHHhhcCCCcceEeccCCCCcccccc---cCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCC---
Q psy1547 86 LKDIFEHINPDSATIWKFKGTEKDEAQA---TDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEE--- 159 (216)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~--- 159 (216)
+..|.+ +++++++......... ............+.+++...+++ ++++++|||++|+++++++..
T Consensus 117 ~~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~pGHt~g~~~~~~~~~~~~ 188 (254)
T 3dha_A 117 NGAFTN------TPIIVQRTEYEAALHREEYMKECILPHLNYKIIEGDYEVVPG--VQLLYTPGHSPGHQSLFIETEQSG 188 (254)
T ss_dssp GGGCSS------SCEEEEHHHHHHHHHCTTSCGGGSCTTSCEEEECSSEEEETT--EEEEECCSSSTTCEEEEEEETTTE
T ss_pred hHHCCC------CEEEECHHHHHHhhccccccccccCcccceEEecCCccccCC--EEEEECCCCCCCCEEEEEEeCCCC
Confidence 987752 5777765432221100 00011111223444566666776 888999999999999999743
Q ss_pred cEEEEcceecCCC-----cc-ccccHHHHHHHHHHHHcCCCC---eEEcCCCccccC
Q psy1547 160 NVVFSGDTILGEG-----TT-VFSDLISYIESLRRIRSLKPD---IIYPAHGPVVEV 207 (216)
Q Consensus 160 ~vl~~GD~~~~~~-----~~-~~~~~~~~~~~l~~l~~~~~~---~v~pgHg~~~~~ 207 (216)
+++|+||+++... .. ...|..+++++++++.++..+ .++||||+....
T Consensus 189 ~vl~~GD~~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~~~v~pgHg~~~~~ 245 (254)
T 3dha_A 189 SVLLTIDASYTKENFEDEVPFAGFDPELALSSIKRLKEVVKKEKPIIFFGHDIEQEK 245 (254)
T ss_dssp EEEEEETTCSSHHHHHSCCCCSCSCHHHHHHHHHHHHHHHHHHCCEEEESSCHHHHT
T ss_pred EEEEEecccchhhhcccCCCcCcCCHHHHHHHHHHHHHHHHhcCCEEEeCCCHHHHH
Confidence 7999999987531 12 226899999999999988664 999999987764
No 41
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.92 E-value=2.4e-25 Score=174.92 Aligned_cols=171 Identities=20% Similarity=0.271 Sum_probs=117.8
Q ss_pred CCceEEEEecCCceEEEecCCCCChh------------HHHHHHHHHhhCCC---CccEEEecccCccccCChHHHHhhc
Q psy1547 29 QGTNTYILGTGSRRLLLDTGEPDHME------------YIENLKQVLNKESI---SLEHIVLSHWHNDHVGGLKDIFEHI 93 (216)
Q Consensus 29 ~~~n~~li~~~~~~iliD~g~~~~~~------------~~~~~~~~l~~~~~---~i~~v~~TH~H~DH~gg~~~~~~~~ 93 (216)
.+.|||+|+++++.+|||||.+.... ..+.+.+.+.+.+. +|++|++||.|+||++|+..|.+
T Consensus 33 ~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~~~-- 110 (274)
T 3aj3_A 33 FPVYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKYFPH-- 110 (274)
T ss_dssp EEEEEEEEEETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHTTCCGGGCCEEECSCCSGGGTTTGGGCTT--
T ss_pred eeEEEEEEEeCCccEEEECCCCcccccCccccCCcccCccccHHHHHHHcCCCHHHCCEEEecCcCcccCCchhhCCC--
Confidence 34799999999999999999873210 01234455555443 69999999999999999988722
Q ss_pred CCCcceEeccCCCCccccc--------c-cCC---------------C----CCCCceeecCCCCeEEECCeeEEEEeCC
Q psy1547 94 NPDSATIWKFKGTEKDEAQ--------A-TDF---------------V----PENKTVQTLTDGQLLKVEGATLRVIHTP 145 (216)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~--------~-~~~---------------~----~~~~~~~~~~~~~~~~~g~~~i~~~~~p 145 (216)
+++++++........ + ... . ....+...+++ .+.+++ +++++++|
T Consensus 111 ----a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~g-~~~v~~~p 183 (274)
T 3aj3_A 111 ----AKKICHRSEVPQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTFEGIDG--DVDLAR-GVKLISTP 183 (274)
T ss_dssp ----SEEEEETTHHHHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGGCCTTCCSTTSCEEEECS--SEEEET-TEEEEECT
T ss_pred ----CEEEECHHHHHHHhCcCCccccccChhhhccccccccccccccccccccCCCCceEcCC--ccccCC-EEEEEECC
Confidence 467665543221100 0 000 0 01223455553 356677 89999999
Q ss_pred CCCCCceEEEEC---CCcEEEEcceecCC------Ccc-ccccHHHHHHHHHHHHcCCCC---eEEcCCCccccCc
Q psy1547 146 GHTTDHIVLKLE---EENVVFSGDTILGE------GTT-VFSDLISYIESLRRIRSLKPD---IIYPAHGPVVEVG 208 (216)
Q Consensus 146 gHt~~~~~~~~~---~~~vl~~GD~~~~~------~~~-~~~~~~~~~~~l~~l~~~~~~---~v~pgHg~~~~~~ 208 (216)
|||+|+++++++ +++++|+||+++.. ..+ ...+..++.++++++.++..+ .++|||+.+..+.
T Consensus 184 GHt~g~~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~~~i~pgH~~~~~~~ 259 (274)
T 3aj3_A 184 GHSIGHYSLLVEFPRRKPILFTIDAAYTQKSLETLCQAAFHIDPVAGVNSMRKVKKLAEDHGAELMYSHDMDNFKT 259 (274)
T ss_dssp TSSTTCEEEEECCSSSCCEEEEETTCSSHHHHHHTCCCSCCSCHHHHHHHHHHHHHHHHHHTCEEEESSCHHHHTT
T ss_pred CCCceeeEEEEECCCCCEEEEEechhhhHHHhcCCCCCceecCHHHHHHHHHHHHHHHhcCCCEEEecCCHHHHHh
Confidence 999999999997 46899999976542 112 236789999999999887543 8999999886443
No 42
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.91 E-value=2.3e-24 Score=169.38 Aligned_cols=169 Identities=17% Similarity=0.262 Sum_probs=119.0
Q ss_pred CceEEEEecCCceEEEecCCCCChh-----H--------------HHHHHHHHhhCC---CCccEEEecccCccccCChH
Q psy1547 30 GTNTYILGTGSRRLLLDTGEPDHME-----Y--------------IENLKQVLNKES---ISLEHIVLSHWHNDHVGGLK 87 (216)
Q Consensus 30 ~~n~~li~~~~~~iliD~g~~~~~~-----~--------------~~~~~~~l~~~~---~~i~~v~~TH~H~DH~gg~~ 87 (216)
+.|||+|+++++.+|||||.+.... + .+.+.+.+.+.+ .+|++|++||.|+||++|+.
T Consensus 42 ~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~ 121 (276)
T 2r2d_A 42 PVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVE 121 (276)
T ss_dssp EEEEEEEECSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTGG
T ss_pred eeEEEEEECCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCChh
Confidence 4799999999999999999875320 0 022334444444 36999999999999999999
Q ss_pred HHHhhcCCCcceEeccCCCCcccccc------cCCC---------CCCCceeecC-CCCeEEECCeeEEEEeC-CCCCCC
Q psy1547 88 DIFEHINPDSATIWKFKGTEKDEAQA------TDFV---------PENKTVQTLT-DGQLLKVEGATLRVIHT-PGHTTD 150 (216)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~~~------~~~~---------~~~~~~~~~~-~~~~~~~g~~~i~~~~~-pgHt~~ 150 (216)
.| + .++++.++......... ...+ ....+...++ .++.+.+++ .++++++ |||++|
T Consensus 122 ~~----~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~-~~~v~~~~pgHt~g 194 (276)
T 2r2d_A 122 YF----G--KSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAP-GVNLLNFGTGHASG 194 (276)
T ss_dssp GC----S--SSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEET-TEEEEEEESSSSSS
T ss_pred hC----C--CCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEecC-CEEEEeCCCCCCce
Confidence 87 2 26777765332211000 0000 0123456676 478888874 3888999 999999
Q ss_pred ceEEEEC--C-CcEEEEcceecCCC--------ccccccHHHHHHHHHHHHcC---CCCeEEcCCCccc
Q psy1547 151 HIVLKLE--E-ENVVFSGDTILGEG--------TTVFSDLISYIESLRRIRSL---KPDIIYPAHGPVV 205 (216)
Q Consensus 151 ~~~~~~~--~-~~vl~~GD~~~~~~--------~~~~~~~~~~~~~l~~l~~~---~~~~v~pgHg~~~ 205 (216)
+++++++ + ++++|+||+++... .....|..++.++++++.++ ....++|||+++.
T Consensus 195 ~~~~~~~~~~~~~vl~~GD~~~~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~~~v~~~H~~~~ 263 (276)
T 2r2d_A 195 MLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQ 263 (276)
T ss_dssp EEEEEEECSSSCEEEEEETTSCCHHHHSSSCCCCSSCSCHHHHHHHHHHHHHHHHHTTCEEEESSCHHH
T ss_pred eEEEEEEcCCCceEEEEechhhhHHHhcccCCCCccccCHHHHHHHHHHHHHHHhcCCCEEEeCCCHHH
Confidence 9999997 4 78999999876431 11236789999999999887 4569999999875
No 43
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.91 E-value=1.2e-25 Score=181.29 Aligned_cols=181 Identities=22% Similarity=0.284 Sum_probs=121.2
Q ss_pred CceEEEEecCCceEEEecCCCCCh-hHHHHHHHHHhhCC---CCccEEEecccCccccCChHHH-HhhcCCCcceEeccC
Q psy1547 30 GTNTYILGTGSRRLLLDTGEPDHM-EYIENLKQVLNKES---ISLEHIVLSHWHNDHVGGLKDI-FEHINPDSATIWKFK 104 (216)
Q Consensus 30 ~~n~~li~~~~~~iliD~g~~~~~-~~~~~~~~~l~~~~---~~i~~v~~TH~H~DH~gg~~~~-~~~~~~~~~~i~~~~ 104 (216)
+.|||+|+++++.+|||||.+... .....+.+.+.+.+ .+|++|++||.|.||+||+..+ ...|+. ++++.++
T Consensus 96 ~~n~~LI~~~~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~~~fp~--a~v~~~~ 173 (331)
T 1p9e_A 96 SVTGYLVNTGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQLAFPN--AVVRADQ 173 (331)
T ss_dssp EEEEEEEECSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEESSTT--CEEECBH
T ss_pred EEEEEEEEECCEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccccccCCC--CEEEECH
Confidence 478999999999999999976310 00112333444434 3699999999999999999843 234442 6777765
Q ss_pred CCCccccccc--CCCC----------------C---CCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEEC--CCcE
Q psy1547 105 GTEKDEAQAT--DFVP----------------E---NKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLE--EENV 161 (216)
Q Consensus 105 ~~~~~~~~~~--~~~~----------------~---~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~--~~~v 161 (216)
.......... ...+ + ..+...+++++++..| ++++++||||+|+++++++ ++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~g---i~vi~tpGHtpG~~~~~i~~~~~~v 250 (331)
T 1p9e_A 174 KEADFWLSQTNLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLVPG---IKALASHGHTPGHTTYVVESQGQKL 250 (331)
T ss_dssp HHHHHHSCHHHHTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECSTT---EEEEECTTSSTTCEEEEEEETTEEE
T ss_pred HHHHHHhCchhhccCchhhhhHHHHHHHHHhhhhcccCceEEeCCCCEEccc---EEEEEcCCCChhCEEEEEEECCcEE
Confidence 4322110000 0000 0 1234566777666543 9999999999999999997 6789
Q ss_pred EEEcceecCC----Ccc-----ccccHHHHHHHHHHHHcC---CCCeEEcCCCcc------ccCccccccCC
Q psy1547 162 VFSGDTILGE----GTT-----VFSDLISYIESLRRIRSL---KPDIIYPAHGPV------VEVGLSFSLMP 215 (216)
Q Consensus 162 l~~GD~~~~~----~~~-----~~~~~~~~~~~l~~l~~~---~~~~v~pgHg~~------~~~~~~~~~~~ 215 (216)
+|+||+++.. ..+ +..|..+++++++++.+. +...++|+|++. ....+.|+|+|
T Consensus 251 lf~GD~~~~~~~~~~~p~~~~~~d~d~~~~~~s~~~ll~~~~~~~~~v~~~H~~~~~~g~v~~~~~~~~~~~ 322 (331)
T 1p9e_A 251 ALLGDLILVAAVQFDDPSVTTQLDSDSKSVAVERKKAFADAAKGGYLIAASHLSFPGIGHIRAEGKGYRFVP 322 (331)
T ss_dssp EECTTSCCCHHHHTTCTTCCBTTCSSHHHHHHHHHHHHHHHHHHTCEEECTTSSTTCEEEEEEETTEEEEEE
T ss_pred EEEECccCcchhcccCCCceecccCCHHHHHHHHHHHHHHHhcCCCEEEEECCCCCceEEEEEcCCeEEEEe
Confidence 9999987643 111 226899999999988764 345999999753 35566688876
No 44
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.91 E-value=3.7e-25 Score=174.45 Aligned_cols=172 Identities=15% Similarity=0.134 Sum_probs=115.5
Q ss_pred CceEEEEecCCceEEEecCCCCChh-----------HHHHHHHHHhhCC---CCccEEEecccCccccCChHHHHh--hc
Q psy1547 30 GTNTYILGTGSRRLLLDTGEPDHME-----------YIENLKQVLNKES---ISLEHIVLSHWHNDHVGGLKDIFE--HI 93 (216)
Q Consensus 30 ~~n~~li~~~~~~iliD~g~~~~~~-----------~~~~~~~~l~~~~---~~i~~v~~TH~H~DH~gg~~~~~~--~~ 93 (216)
++|||+|+++++.+|||||...... ..+.+.+.+.+.+ .+|++|++||.|.||+||+..+.+ .|
T Consensus 47 ~~n~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~~~f 126 (280)
T 3esh_A 47 PTHPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIF 126 (280)
T ss_dssp ECCCEEEECSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCCSS
T ss_pred eEEEEEEEECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccccccccCC
Confidence 5799999999999999999864210 0122444444444 368899999999999999999887 55
Q ss_pred CCCcceEeccCCCCccccc--------c-cCCC-CCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEEC--CCcE
Q psy1547 94 NPDSATIWKFKGTEKDEAQ--------A-TDFV-PENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLE--EENV 161 (216)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~--------~-~~~~-~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~--~~~v 161 (216)
+. ++++.++........ + .... +.......++++..+ .+ .++++++|||++|+++++++ ++++
T Consensus 127 p~--a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~-gi~~~~~pGHt~g~~~~~i~~~~~~v 201 (280)
T 3esh_A 127 EN--AIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEP--VP-GIKMQHSGGHSFGHTIITIESQGDKA 201 (280)
T ss_dssp TT--CEEEEEHHHHHHHHSCCTTGGGTSCGGGCCGGGGGEEEESSEECS--ST-TEEEEECCSSSTTCEEEEEEETTEEE
T ss_pred CC--CEEEECHHHHHHhhCcccccccchhhhhhhhhhheEEEeCCCCeE--cC-CEEEEEcCCCCcccEEEEEEECCcEE
Confidence 43 677776533221100 0 0000 001233444444333 22 48899999999999999995 5689
Q ss_pred EEEcceecCCCc-------cccccHHHHHHHHHHHHcC---CCCeEEcCCCcccc
Q psy1547 162 VFSGDTILGEGT-------TVFSDLISYIESLRRIRSL---KPDIIYPAHGPVVE 206 (216)
Q Consensus 162 l~~GD~~~~~~~-------~~~~~~~~~~~~l~~l~~~---~~~~v~pgHg~~~~ 206 (216)
+|+||+++.... .+..+..+..++++++.+. +..+++||||+...
T Consensus 202 lftGD~~~~~~~~~~d~~~~~d~d~~~~~~s~~~ll~~~~~~~~~v~pgH~~~~~ 256 (280)
T 3esh_A 202 VHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYF 256 (280)
T ss_dssp EECGGGSCSGGGCSTTCCCTTCSCHHHHHHHHHHHHHHHHHTTCEEECSSCSSEE
T ss_pred EEEEccCCchhhcCCCccccccCCHHHHHHHHHHHHHHHHhCCCEEEEEccCCCc
Confidence 999999876532 1124778888888887664 44499999998764
No 45
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.83 E-value=2.8e-20 Score=145.54 Aligned_cols=182 Identities=18% Similarity=0.209 Sum_probs=122.7
Q ss_pred eEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhh--
Q psy1547 15 VIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEH-- 92 (216)
Q Consensus 15 v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~-- 92 (216)
+..+......+...++.||++|+.+++.+|||||.+. .+.+.+.+ ...+|++|++||.|.||++|+..+.+.
T Consensus 27 i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~G~~~----~~~l~~~~--~~~~i~~v~iTH~H~DH~~gl~~l~~~~~ 100 (268)
T 1zkp_A 27 MTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGV----LAQLQKYI--TPSDIDAVVLSHYHHDHVADIGVLQYARL 100 (268)
T ss_dssp EEEEECBSSSCCTTCCBSEEEEEETTEEEEECCCTTH----HHHHTTTC--CGGGCCEEECSCCCHHHHTTHHHHHHHHH
T ss_pred EEEEeCCCCcCCCCCCccEEEEEECCcEEEEECCHHH----HHHHHHhC--CcccCCEEEEecCCchhhCCHHHHHHHHH
Confidence 4444322333334456899999999999999999862 12222221 234799999999999999999988765
Q ss_pred c------CCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEEC--CCcEEEE
Q psy1547 93 I------NPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLE--EENVVFS 164 (216)
Q Consensus 93 ~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~--~~~vl~~ 164 (216)
+ ....++++.++.......... .........+++++.+.+|+.++++++++ |++++++++++ +.+++|+
T Consensus 101 ~~~~~~~~~~~~~i~~~~~~~~~l~~~~--~~~~~~~~~~~~g~~~~~g~~~v~~~~~~-H~~~~~~~~i~~~~~~i~~~ 177 (268)
T 1zkp_A 101 ITSATKGQLPELPIYGHTFDENGFHSLT--HEPHTKGIPYNPEETLQIGPFSISFLKTV-HPVTCFAMRITAGNDIVVYS 177 (268)
T ss_dssp HHHHHHCCCCCEEEEECSSSHHHHHTTC--BTTTEEEEECCTTSCEEETTEEEEEEECC-SSSCCEEEEEEETTEEEEEC
T ss_pred hcccccCCCCceEEEeCccHHHHHHhcc--cCCccceEEecCCCeEEECCEEEEEEECC-CCCCceEEEEEECCeEEEEe
Confidence 2 222378888776543322111 11224567888999999999999999998 99999999986 4689999
Q ss_pred cceecCCCccc-------------ccc-----H---HHHHHHHHHHHcCCCCeEEcCCCccc
Q psy1547 165 GDTILGEGTTV-------------FSD-----L---ISYIESLRRIRSLKPDIIYPAHGPVV 205 (216)
Q Consensus 165 GD~~~~~~~~~-------------~~~-----~---~~~~~~l~~l~~~~~~~v~pgHg~~~ 205 (216)
||+.+.+.... +.+ . ..+.++++.+++.+++.+++.|-.+.
T Consensus 178 GD~~~~~~~~~~~~~~d~li~e~~~~~~~~~~~~~H~~~~~a~~~~~~~~~~~lil~H~~~~ 239 (268)
T 1zkp_A 178 ADSSYIPEFIPFTKDADLFICECNMYAHQEAAKAGHMNSTEVASIAKDANVKELLLTHLPHT 239 (268)
T ss_dssp CSCCCCTTHHHHHTTCSEEEEECCBCTTSCCGGGTCCBHHHHHHHHHHTTCSEEEEESBCSS
T ss_pred CCCCCCHHHHHHHcCCCEEEEECCCCccccccCCCCCCHHHHHHHHHHcCCCEEEEECCCCC
Confidence 99876432100 000 0 01234455556678899999996664
No 46
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.78 E-value=9.6e-20 Score=155.57 Aligned_cols=141 Identities=17% Similarity=0.229 Sum_probs=104.0
Q ss_pred CCCceEEEEecCCceEEEecCCCCChhHHH------HHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEe
Q psy1547 28 LQGTNTYILGTGSRRLLLDTGEPDHMEYIE------NLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIW 101 (216)
Q Consensus 28 ~~~~n~~li~~~~~~iliD~g~~~~~~~~~------~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~ 101 (216)
..+.|||+++.+++.+|||||......... .-.+.+.....+|++||+||.|.||+||++++.+.+. +++|
T Consensus 19 eiG~n~~li~~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~l~~~~~---~pIy 95 (555)
T 3zq4_A 19 EIGKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLRQVN---IPVY 95 (555)
T ss_dssp SSSCCEEEEEETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHHHHTTCC---CCEE
T ss_pred ccCCEEEEEEECCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHHHHHhcC---ceEE
Confidence 346799999999999999999743211000 0023344445689999999999999999999998764 7888
Q ss_pred ccCCCCcccccc--cCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEE--CCCcEEEEcceecCC
Q psy1547 102 KFKGTEKDEAQA--TDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKL--EEENVVFSGDTILGE 171 (216)
Q Consensus 102 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~--~~~~vl~~GD~~~~~ 171 (216)
+++......... ............++.++.+.+|+.+++++++++|++|++++.+ ++++++|+||+.+..
T Consensus 96 ~t~~t~~ll~~~l~~~~~~~~~~~~~v~~g~~~~ig~~~v~~~~~~H~~pgs~~~~i~~~~~~il~tGD~~~~~ 169 (555)
T 3zq4_A 96 GGKLAIGLLRNKLEEHGLLRQTKLNIIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDF 169 (555)
T ss_dssp ECHHHHHHHHHHHHHHSTTTTCCEEECCTTCCEEETTEEEEEEEEBCSSSSEEEEEEEETTEEEEECCSCBCCS
T ss_pred ECHHHHHHHHHHHHHcCccCCCceEEeCCCCEEEECCEEEEEEeCCCCCcCcEEEEEEECCcEEEEeCCCCCCC
Confidence 876543322111 0111123467889999999999999999999988999998888 578999999987643
No 47
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.73 E-value=1.7e-17 Score=129.05 Aligned_cols=129 Identities=19% Similarity=0.207 Sum_probs=95.1
Q ss_pred CCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCCC
Q psy1547 28 LQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTE 107 (216)
Q Consensus 28 ~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~ 107 (216)
.+..+|++|+.+++.+|||+|.+. +.+.+. ..+|++|++||.|.||++|+..+..... ..++++.++...
T Consensus 36 ~r~~s~~li~~~~~~iLiD~G~~~-------~~~~~~--~~~id~IliTH~H~DHi~gl~~l~~~~~-~~~~v~~~~~~~ 105 (258)
T 3g1p_A 36 RRQPCSGVVKFNDAITLIDAGLHD-------LADRWS--PGSFQQFLLTHYHMDHVQGLFPLRWGVG-DPIPVYGPPDEQ 105 (258)
T ss_dssp CBCBSEEEEEETTEEEEECCCCTT-------HHHHCC--TTSSCEEECSCCCHHHHGGGTTTTTCSS-SCEEEEECCCSS
T ss_pred cccCceEEEEECCcEEEEECCchH-------HHhhcC--cccCCEEEEccCchhHhCCHHHHhccCC-CCeEEEeChhhh
Confidence 456789999999999999999542 222332 3479999999999999999988854432 237888877655
Q ss_pred cccccccCCCCCCCc-eeecCCCCeEEECCeeEEEEeCCCCCCCceEEEEC--CCcEEEEcceec
Q psy1547 108 KDEAQATDFVPENKT-VQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLE--EENVVFSGDTIL 169 (216)
Q Consensus 108 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~--~~~vl~~GD~~~ 169 (216)
...... ..+.... ...+++++.+.+|+.++++++++ |++++++|.++ +.+++|+||+.+
T Consensus 106 ~~~~~~--~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~~-H~~~~~g~~i~~~~~~i~~~GDt~~ 167 (258)
T 3g1p_A 106 GCDDLF--KHPGLLDFSHTVEPFVVFDLQGLQVTPLPLN-HSKLTFGYLLETAHSRVAWLSDTAG 167 (258)
T ss_dssp CSTTTT--TSCTTEEEEEECCTTCCEEETTEEEEEEECC-SSSCCEEEEEECSSCEEEEECSCSS
T ss_pred hHHHHh--cCCCccccccccCCCCeEEECCEEEEEEECC-CCCCceEEEEEeCCcEEEEECCCCC
Confidence 211111 1111122 25788999999999999999988 99999999996 357999999854
No 48
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.73 E-value=5.3e-18 Score=145.31 Aligned_cols=142 Identities=19% Similarity=0.181 Sum_probs=101.4
Q ss_pred CCceEEEEecCCceEEEecCCCCChhHH-H-----HHHHHHhhCCCCccEEEecccCccccCChHHHHhhcC--CCcceE
Q psy1547 29 QGTNTYILGTGSRRLLLDTGEPDHMEYI-E-----NLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHIN--PDSATI 100 (216)
Q Consensus 29 ~~~n~~li~~~~~~iliD~g~~~~~~~~-~-----~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~--~~~~~i 100 (216)
.+.||++++.+++.+|||||........ . ...+.+.....+|++||+||.|.||++|++++.+.++ ...+++
T Consensus 28 ig~n~~li~~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~~~~~~~~~pI 107 (562)
T 3bk2_A 28 IGKNITVFRFRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMIFGKESPVPI 107 (562)
T ss_dssp SSCCEEEEEETTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTHHHHHHHHHCSCCCSEE
T ss_pred cCCCEEEEEECCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCHHHHHHhhccccCCceE
Confidence 4689999999999999999964221100 0 0012233334579999999999999999999988762 012788
Q ss_pred eccCCCCcccccc--cCCCCC-CCceeecCCCCeEEECC-eeEEEEeCCCCCCCceEEEEC--CCcEEEEcceecC
Q psy1547 101 WKFKGTEKDEAQA--TDFVPE-NKTVQTLTDGQLLKVEG-ATLRVIHTPGHTTDHIVLKLE--EENVVFSGDTILG 170 (216)
Q Consensus 101 ~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~g~-~~i~~~~~pgHt~~~~~~~~~--~~~vl~~GD~~~~ 170 (216)
|+++......... ...... ......++.++.+.+|+ .+++++++++|++|++++.+. +++++|+||+.+.
T Consensus 108 y~~~~t~~~l~~~l~~~~~~~~~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~~gs~~~~i~~~~~~il~tGD~~~~ 183 (562)
T 3bk2_A 108 YGARLTLGLLRGKLEEFGLRPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVVIRTPIGTIVHTGDFKLD 183 (562)
T ss_dssp EEEHHHHHHHHHHHHHTTCCSTTSEEEEECTTCEEEETTTEEEEEEECCCSSSSCEEEEEEETTEEEEECCSCCCC
T ss_pred EeCHHHHHHHHHHHHHcCCCcCCceEEEECCCCEEEeCCCEEEEEEECCCCCcccEEEEEEECCeEEEEcCCCCCC
Confidence 8876543321110 001111 34677889999999998 999999999889999999874 6789999998653
No 49
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.73 E-value=1.6e-18 Score=144.20 Aligned_cols=169 Identities=21% Similarity=0.294 Sum_probs=112.9
Q ss_pred CceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCCCcc
Q psy1547 30 GTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKD 109 (216)
Q Consensus 30 ~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~~ 109 (216)
+.||++++.+++.+|||||...... .......+.....+|++|++||.|.||+||++.+.+... ..++|+++.....
T Consensus 13 g~s~~li~~~~~~iLID~G~~~~~~-~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~~~--~~~Iy~t~~t~~l 89 (431)
T 3iek_A 13 TGSAHLLLAGGRRVLLDCGMFQGKE-EARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFREGY--RGPVYATRATVLL 89 (431)
T ss_dssp SCCCEEEEETTEEEEECCCCCCGGG-GGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHTTC--CSCEEECHHHHHH
T ss_pred CCcEEEEEECCeEEEEeCCCCcchh-hccchhhcCCCcccCCEEEECCCChHHhccHHHHHHcCC--CCeEEEcHHHHHH
Confidence 4699999999999999999853221 101111111122379999999999999999999987633 2678877654332
Q ss_pred cccc-------c--CCCCCC------CceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEEC--CCcEEEEcceecCCC
Q psy1547 110 EAQA-------T--DFVPEN------KTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLE--EENVVFSGDTILGEG 172 (216)
Q Consensus 110 ~~~~-------~--~~~~~~------~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~--~~~vl~~GD~~~~~~ 172 (216)
.... . +.+... ..+..++.++.+.+++.++++++ +||++|++++.++ +.+++|+||+-....
T Consensus 90 ~~~~l~d~~~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~-agH~~Gs~~~~i~~~~~~ilfsGD~~~~~~ 168 (431)
T 3iek_A 90 MEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQ-AGHLPGSAFVVAQGEGRTLVYSGDLGNREK 168 (431)
T ss_dssp HHHHHHHHHHHCSSCSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEE-CCSSTTCEEEEEEETTEEEEECCCCCCTTS
T ss_pred HHHHHHHHHhhcccCCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEe-CCCCcCceEEEEEECCEEEEEeCCCCCCCC
Confidence 1110 0 000000 24678889999999999999988 4899999999985 567999999754321
Q ss_pred cc----------------------cccc----HHHHHHHHHHHHcCCCCeEEcCCC
Q psy1547 173 TT----------------------VFSD----LISYIESLRRIRSLKPDIIYPAHG 202 (216)
Q Consensus 173 ~~----------------------~~~~----~~~~~~~l~~l~~~~~~~v~pgHg 202 (216)
.. ...+ ..+..+.+++..+.+..+++|.+.
T Consensus 169 ~~l~~~~~~~~~D~LI~EsTy~~~~h~~~~~~~~~l~~~i~~~~~~gg~vlIp~fa 224 (431)
T 3iek_A 169 DVLPDPSLPPLADLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTFA 224 (431)
T ss_dssp SSSCCCCBCCCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred cccCCccccCCccEEEEEcccCCcCCCChHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 10 0011 234456666666677789999885
No 50
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.70 E-value=3.8e-17 Score=141.89 Aligned_cols=170 Identities=20% Similarity=0.199 Sum_probs=112.2
Q ss_pred CceEEEEecCCceEEEecCCCCChhHHHHHHHHHh---hCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCC
Q psy1547 30 GTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLN---KESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGT 106 (216)
Q Consensus 30 ~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~---~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~ 106 (216)
+.||++|+.+++.+|||||.......-......+. ....+|++|++||.|.||+||++++.+... .+++|+++..
T Consensus 192 g~s~~lI~~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~~~--~~~Iy~t~~t 269 (636)
T 2ycb_A 192 GRSCLYLQTPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHYGY--DGPVYCTAPT 269 (636)
T ss_dssp SCCEEEEECSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHTTC--CSCEEECHHH
T ss_pred CCCEEEEEECCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhcCC--CCeEEEcchH
Confidence 57999999999999999998753210011111121 234479999999999999999999987321 2688887654
Q ss_pred Ccccccc-------------cCCCCC------CCceeecCCCCeEEE-CCeeEEEEeCCCCCCCceEEEEC--CC--cEE
Q psy1547 107 EKDEAQA-------------TDFVPE------NKTVQTLTDGQLLKV-EGATLRVIHTPGHTTDHIVLKLE--EE--NVV 162 (216)
Q Consensus 107 ~~~~~~~-------------~~~~~~------~~~~~~~~~~~~~~~-g~~~i~~~~~pgHt~~~~~~~~~--~~--~vl 162 (216)
....... ...+.. ......++.++.+.+ ++.++++++ +||++|+++++++ ++ +++
T Consensus 270 ~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~-~gH~~Gs~~~~i~~~~~~~~il 348 (636)
T 2ycb_A 270 RDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHN-AGHILGSAMAHLHIGDGQHNMV 348 (636)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEE-CCSSTTCEEEEEEETTTTTCEE
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeC-CCCCCCcEEEEEEECCCeEEEE
Confidence 3221100 000000 013567888999999 899998864 8999999999986 56 899
Q ss_pred EEcceecCCC---------c--------------cc--ccc----HHHHHHHHHHHHcCCCCeEEcCCC
Q psy1547 163 FSGDTILGEG---------T--------------TV--FSD----LISYIESLRRIRSLKPDIIYPAHG 202 (216)
Q Consensus 163 ~~GD~~~~~~---------~--------------~~--~~~----~~~~~~~l~~l~~~~~~~v~pgHg 202 (216)
|+||+-.... . .. ..+ .+++.+.+++..+.+..+++|+|.
T Consensus 349 ftGD~~~~~~~ll~~~~~~~~~~D~LI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa 417 (636)
T 2ycb_A 349 YTGDFKYEQSRLLEAAANRFPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRRGGKILIPVFA 417 (636)
T ss_dssp ECCSCCSSCCSSSCCCCCCCSCCSEEEEECTTCSGGGCCCCHHHHHHHHHHHHHHHHHHTCCEEEECCT
T ss_pred EECCCCCCcccccCCcccCCCCCeEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEECC
Confidence 9999732110 0 00 111 234455666665568889999995
No 51
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.69 E-value=1.2e-16 Score=133.02 Aligned_cols=135 Identities=16% Similarity=0.245 Sum_probs=94.4
Q ss_pred CceEEEEecCCceEEEecCCCCCh------hHHHHHHHH--H------------------hhCCCCccEEEecccCcccc
Q psy1547 30 GTNTYILGTGSRRLLLDTGEPDHM------EYIENLKQV--L------------------NKESISLEHIVLSHWHNDHV 83 (216)
Q Consensus 30 ~~n~~li~~~~~~iliD~g~~~~~------~~~~~~~~~--l------------------~~~~~~i~~v~~TH~H~DH~ 83 (216)
+.||++|+.+++.+|||||..... +....+... + .....+|++||+||.|.||+
T Consensus 19 g~n~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~i~~v~lTH~H~DHi 98 (429)
T 2az4_A 19 GGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQHTAVFLSHAHLDHS 98 (429)
T ss_dssp SCCEEEEEETTEEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCCSEEEEECSCSCHHHH
T ss_pred CCeEEEEEECCeEEEEecCCCCCcccCCCcchhhhccCCcccCCchhhhcccccccchhhhhccccCCEEEECCchHHHh
Confidence 579999999999999999986421 111112110 0 12234799999999999999
Q ss_pred CChHHHHhhcCCCcceEeccCCCCcccccccC----CC-------CCCCceeecCCCCeEEECCeeEEEEeCCCC-CCCc
Q psy1547 84 GGLKDIFEHINPDSATIWKFKGTEKDEAQATD----FV-------PENKTVQTLTDGQLLKVEGATLRVIHTPGH-TTDH 151 (216)
Q Consensus 84 gg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~g~~~i~~~~~pgH-t~~~ 151 (216)
+|++.+.+. +++|+++........... .. .....+..++.++.+.+|+.++++++++ | ++|+
T Consensus 99 ggl~~l~~~-----~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~~-H~~~gs 172 (429)
T 2az4_A 99 RMINYLDPA-----VPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEISVEIVPVD-HDAYGA 172 (429)
T ss_dssp TTGGGBCTT-----SCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEETTEEEEEEECC-CSSTTC
T ss_pred CcHhHhcCC-----CCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEECCEEEEEEECC-CCChhh
Confidence 999998653 677876543322111100 00 1124567888999999999999999975 7 7999
Q ss_pred eEEEEC--CCcEEEEcceecC
Q psy1547 152 IVLKLE--EENVVFSGDTILG 170 (216)
Q Consensus 152 ~~~~~~--~~~vl~~GD~~~~ 170 (216)
+++.+. +++++|+||+.+.
T Consensus 173 ~~~~i~~~~~~i~~tGD~~~~ 193 (429)
T 2az4_A 173 SALLIRTPDHFITYTGDLRLH 193 (429)
T ss_dssp EEEEEEETTEEEEECCSCCSS
T ss_pred EEEEEEeCCcEEEECCCcccC
Confidence 999874 6789999997654
No 52
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.69 E-value=9.1e-17 Score=123.29 Aligned_cols=155 Identities=16% Similarity=0.110 Sum_probs=105.4
Q ss_pred CceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCCCcc
Q psy1547 30 GTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKD 109 (216)
Q Consensus 30 ~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~~ 109 (216)
+.+||+|+.++..+|||||..... +. ...++++|++||.|.||+ +...+.... ...++++.++.....
T Consensus 36 g~s~~li~~~~~~iliDpg~~~~~---------~~-~~~~id~VliTH~H~DH~-~~~~l~~~~-~~~~~v~~~~~~~~~ 103 (235)
T 3kl7_A 36 KHGSLMLTYDNHSIQVDPVSEYAD---------YT-TFPKADIILITHEHGDHL-DPKAIQAVE-KSDTEIIANENSQKK 103 (235)
T ss_dssp ETTEEEEEETTEEEEESCCTTTCC---------TT-SSCCCSEEEECCSSTTTC-CHHHHHHHC-CTTCEEEECHHHHHH
T ss_pred cceEEEEEECCEEEEECCCCCccc---------hh-hCCCCCEEEECCCccccC-CHHHHHHhh-cCCCEEEEcHHHHHH
Confidence 578999999999999999986421 11 123699999999999999 666665532 123788876544322
Q ss_pred cccccCCCCCCCceeecCCCC-eEEECCeeEEEEeCCCCCCC---------ceEEEEC--CCcEEEEcceecCCCccc--
Q psy1547 110 EAQATDFVPENKTVQTLTDGQ-LLKVEGATLRVIHTPGHTTD---------HIVLKLE--EENVVFSGDTILGEGTTV-- 175 (216)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~i~~~~~pgHt~~---------~~~~~~~--~~~vl~~GD~~~~~~~~~-- 175 (216)
. .+...++.|+ ++.+|+.+|+++++++.+++ .+++.+. +.+++|+||+.+.+....
T Consensus 104 l----------~~~~~l~~g~~~~~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g~~i~~~GDt~~~~~~~~l~ 173 (235)
T 3kl7_A 104 L----------GKGKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGDTEDIPEMKDLK 173 (235)
T ss_dssp H----------TCSEECCTTCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEEEECCSCCSCGGGGGCC
T ss_pred h----------cCcEEecCCCEEEEECCEEEEEEEeecCCCccccccCCCCceEEEEEeCCeEEEEECCCCchhhHHhhc
Confidence 2 1246788899 99999999999988733221 3666664 668999999876542111
Q ss_pred -------------cccHHHHHHHHHHHHcCCCCeEEcCCCccccCccc
Q psy1547 176 -------------FSDLISYIESLRRIRSLKPDIIYPAHGPVVEVGLS 210 (216)
Q Consensus 176 -------------~~~~~~~~~~l~~l~~~~~~~v~pgHg~~~~~~~~ 210 (216)
.-+.++..+ .+..++++.++|.|-.. .+.+.
T Consensus 174 ~~Dv~il~~~~~~h~~~~ea~~---~~~~l~~k~vip~H~~~-~~~~~ 217 (235)
T 3kl7_A 174 DIDIAFLPVNQPYTMTVSQAAK---AARMFSPKILYPYHYGD-TKIGE 217 (235)
T ss_dssp SCSEEEEECCTTTSCCHHHHHH---HHHHHCCSEEEEESCTT-CCTTH
T ss_pred CCCEEEECCCCCcccCHHHHHH---HHHHcCCCEEEEEcCCC-CCHHH
Confidence 123444444 44456789999999766 44443
No 53
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.68 E-value=2.1e-17 Score=143.50 Aligned_cols=132 Identities=22% Similarity=0.345 Sum_probs=92.8
Q ss_pred CceEEEEecCCceEEEecCCCCChhHHHHHHHHHh---h-CCCCccEEEecccCccccCChHHHHh-hcCCCcceEeccC
Q psy1547 30 GTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLN---K-ESISLEHIVLSHWHNDHVGGLKDIFE-HINPDSATIWKFK 104 (216)
Q Consensus 30 ~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~---~-~~~~i~~v~~TH~H~DH~gg~~~~~~-~~~~~~~~i~~~~ 104 (216)
+.||++|+.+++.+|||||...... ......+. . ...+|++|++||.|.||+||++++.+ .+. +++|+++
T Consensus 196 g~s~~LI~~~~~~ILID~G~~~~~~--~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~~~~---~~Iy~t~ 270 (640)
T 2xr1_A 196 GRSCFLLSTPESRILIDCGVNVGSD--ENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKYGYE---GPVYCTP 270 (640)
T ss_dssp BCCEEEEECSSCEEEECCCCBCSSC--SSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHTTCC---SCEEECH
T ss_pred CCcEEEEEECCeEEEEeCCCCcccc--ccccccccccccCCcccCcEEEECCCChhhhccHHHHHhcCCC---CeEEECH
Confidence 4799999999999999999874210 00111111 2 23479999999999999999999987 433 6888876
Q ss_pred CCCcccccc-----------cCCCCCC--------CceeecCCCCeEEE-CCeeEEEEeCCCCCCCceEEEEC--CC--c
Q psy1547 105 GTEKDEAQA-----------TDFVPEN--------KTVQTLTDGQLLKV-EGATLRVIHTPGHTTDHIVLKLE--EE--N 160 (216)
Q Consensus 105 ~~~~~~~~~-----------~~~~~~~--------~~~~~~~~~~~~~~-g~~~i~~~~~pgHt~~~~~~~~~--~~--~ 160 (216)
......... +....-. .....++.++.+.+ ++.++++++ +||++|+++++++ ++ +
T Consensus 271 ~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~-~GH~~Gs~~~~i~~~~~~~~ 349 (640)
T 2xr1_A 271 PTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHN-AGHILGSAISHFHIGDGLHN 349 (640)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEE-CSSSTTCEEEEEEETTTTEE
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEc-CCCCcCcEEEEEEECCceEE
Confidence 443211100 0000000 13567889999999 899998865 8999999999986 56 8
Q ss_pred EEEEcce
Q psy1547 161 VVFSGDT 167 (216)
Q Consensus 161 vl~~GD~ 167 (216)
++|+||+
T Consensus 350 ilftGD~ 356 (640)
T 2xr1_A 350 VVFTGDY 356 (640)
T ss_dssp EEECCSC
T ss_pred EEEECCC
Confidence 9999997
No 54
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.68 E-value=2.7e-16 Score=124.55 Aligned_cols=163 Identities=17% Similarity=0.203 Sum_probs=108.7
Q ss_pred ceEEEEec--CC---ceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcC--CCcceEecc
Q psy1547 31 TNTYILGT--GS---RRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHIN--PDSATIWKF 103 (216)
Q Consensus 31 ~n~~li~~--~~---~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~--~~~~~i~~~ 103 (216)
.+|++|+. ++ ..+|||||.+. ..++.+ ....+|++||+||.|.||++|+..+...+. ...+++|.+
T Consensus 63 ~~s~li~~~~~~g~~~~iLID~G~~~----~~~l~~---~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~ 135 (293)
T 3md7_A 63 RASLLVERYDAEGNNTVVVIDTGPDF----RMQMID---SGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYAN 135 (293)
T ss_dssp BCEEEEEEECTTCCEEEEEECCCTTH----HHHHHH---HTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEEC
T ss_pred ccEEEEEecCCCCceeEEEEECCccH----HHHHHh---cCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEEC
Confidence 47899983 44 69999999762 222222 223589999999999999999998876421 123788887
Q ss_pred CCCCccccc-----cc----CCCCCCCceeecCCCCeEEECC----eeEEEEeCCCCCCCceEEEECCCcEEEEcceecC
Q psy1547 104 KGTEKDEAQ-----AT----DFVPENKTVQTLTDGQLLKVEG----ATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILG 170 (216)
Q Consensus 104 ~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~g~----~~i~~~~~pgHt~~~~~~~~~~~~vl~~GD~~~~ 170 (216)
+........ +. ..++.......+++++.+.+|+ .+++++++++++.++++|.++ +++|+||+...
T Consensus 136 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~g~~~~~~~v~~~~~~H~~~~~~g~~i~--~~~y~gDt~~~ 213 (293)
T 3md7_A 136 RLTRNRLYDTFGYCFETPVGSSYPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIG--SVVYCTDVSAF 213 (293)
T ss_dssp HHHHHHHHHHCGGGTSCCTTCCCCCCEEEEECCTTCCEEECCTTCCEEEEEEEEEETTEEEEEEEET--TEEEECSCSBC
T ss_pred HHHHHHHHHhhhhhhccccccCCCCceEEEEcCCCCcEEECCCCCcEEEEEEEecCCCCCEEEEEEe--EEEEECCCCCC
Confidence 543322111 11 1122234577888999999999 999999988555799999995 99999998522
Q ss_pred -CCc--------------------cccccHHHHHHHHHHHHcCCCCeEEcCCCccc
Q psy1547 171 -EGT--------------------TVFSDLISYIESLRRIRSLKPDIIYPAHGPVV 205 (216)
Q Consensus 171 -~~~--------------------~~~~~~~~~~~~l~~l~~~~~~~v~pgHg~~~ 205 (216)
... ....+.+ ++++.+.+++++.+++.|=.+.
T Consensus 214 ~~~~~~~~~~~Dlli~e~~~~~~~~~H~~~~---~a~~~~~~~~~k~lvl~H~~~~ 266 (293)
T 3md7_A 214 PEQSLQYIKDADVLIIGALQYRPHPSHFSLG---EALEWIEKLSPKRAILTHMHVP 266 (293)
T ss_dssp CGGGHHHHTTCSEEEEECCCSSCBTTBCCHH---HHHHHHHHHCCSEEEEESBCTT
T ss_pred CHHHHHHhcCCCEEEEeCccCCCCCCCCCHH---HHHHHHHHcCCCEEEEECCCCC
Confidence 110 1112233 4555555668888888885543
No 55
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.68 E-value=7.5e-17 Score=141.16 Aligned_cols=139 Identities=15% Similarity=0.120 Sum_probs=95.4
Q ss_pred CCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCC---CcceEeccCC
Q psy1547 29 QGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINP---DSATIWKFKG 105 (216)
Q Consensus 29 ~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~---~~~~i~~~~~ 105 (216)
.+.|||+|+.++..+|||||..............+.....+|++||+||.|.||+||++++.+.|+. ..++||+++.
T Consensus 13 v~~n~~LIe~~~~~ILID~G~~~~~~~~~~~l~~L~~~~~~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY~t~~ 92 (717)
T 2i7x_A 13 GTTVGSVVRFDNVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLP 92 (717)
T ss_dssp SSCCCEEEEETTEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHH
T ss_pred CCCCEEEEEECCeEEEEeCCCCcccchhhhHHHHHHhcCCCCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEEecch
Confidence 3689999999999999999987421111222233332233799999999999999999999876420 1268888754
Q ss_pred CCccccc--------ccC--CC----CC-------CCceeecCCCCeEEE----CCeeEEEEeCCCCCCCceEEEEC--C
Q psy1547 106 TEKDEAQ--------ATD--FV----PE-------NKTVQTLTDGQLLKV----EGATLRVIHTPGHTTDHIVLKLE--E 158 (216)
Q Consensus 106 ~~~~~~~--------~~~--~~----~~-------~~~~~~~~~~~~~~~----g~~~i~~~~~pgHt~~~~~~~~~--~ 158 (216)
+...... ... .+ .. ...+..++.++.+.+ ++.++++++ +||++|++++.+. +
T Consensus 93 t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~-aGHs~Gs~~~~I~~~~ 171 (717)
T 2i7x_A 93 VINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYN-AGVCPGGSIWCISTYS 171 (717)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEE-CSSSTTCEEEEEECSS
T ss_pred hHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEEC-CCCCCCcEEEEEEeCC
Confidence 3221100 000 00 00 013567888999999 888998875 8999999999885 6
Q ss_pred CcEEEEccee
Q psy1547 159 ENVVFSGDTI 168 (216)
Q Consensus 159 ~~vl~~GD~~ 168 (216)
++++|+||+-
T Consensus 172 ~~IvytGD~~ 181 (717)
T 2i7x_A 172 EKLVYAKRWN 181 (717)
T ss_dssp CEEEECSSCC
T ss_pred CEEEEECCCC
Confidence 7899999963
No 56
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.66 E-value=3.5e-17 Score=137.29 Aligned_cols=137 Identities=19% Similarity=0.325 Sum_probs=92.6
Q ss_pred CceEEEEecCCceEEEecCCCCChhHHHHHHHHHhh-CCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCCCc
Q psy1547 30 GTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNK-ESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEK 108 (216)
Q Consensus 30 ~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~-~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~ 108 (216)
+.||++|+.++..+|||||........+. ...+.. ...+|++|++||.|.||+||++.+..++.- ..++|+++.+..
T Consensus 24 g~s~~li~~~~~~iLID~G~~~~~~~~~~-~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~-~~~iy~t~~t~~ 101 (459)
T 2i7t_A 24 GRSCIILEFKGRKIMLDCGIHPGLEGMDA-LPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSF-KGRTFMTHATKA 101 (459)
T ss_dssp SSCEEEEEETTEEEEECCCCCTTSCGGGG-SCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSC-CSEEEEEHHHHH
T ss_pred CCCEEEEEECCeEEEEeCCCCcCcccccc-cCcccccCcccCcEEEECCCChhhhhhhHHHHHhcCC-CCCEEechHHHH
Confidence 57999999999999999998632100111 111111 123799999999999999999999876421 156776543321
Q ss_pred ccccc-------------cCCCCC------CCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEEC--CCcEEEEcce
Q psy1547 109 DEAQA-------------TDFVPE------NKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLE--EENVVFSGDT 167 (216)
Q Consensus 109 ~~~~~-------------~~~~~~------~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~--~~~vl~~GD~ 167 (216)
..... ...+.. ...+..++.++.+.+++.++++++ +||++|+++++++ +.+++|+||+
T Consensus 102 l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~-~GH~~Gs~~~~i~~~~~~il~sGD~ 180 (459)
T 2i7t_A 102 IYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYH-AGHVLGAAMFMIEIAGVKLLYTGDF 180 (459)
T ss_dssp HHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEE-CCSSTTCEEEEEEETTEEEEECCSC
T ss_pred HHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEEe-CCCccCcEEEEEEECCcEEEEeCCC
Confidence 10000 000000 124677888999999998888875 7999999999986 4689999997
Q ss_pred ec
Q psy1547 168 IL 169 (216)
Q Consensus 168 ~~ 169 (216)
..
T Consensus 181 ~~ 182 (459)
T 2i7t_A 181 SR 182 (459)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 57
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.65 E-value=1.6e-15 Score=129.78 Aligned_cols=161 Identities=14% Similarity=0.258 Sum_probs=103.8
Q ss_pred CceEEEEecCCceEEEecCCCCC--------------------hhHHHHHHHHHhhCCC-CccEEEecccCccccCChHH
Q psy1547 30 GTNTYILGTGSRRLLLDTGEPDH--------------------MEYIENLKQVLNKESI-SLEHIVLSHWHNDHVGGLKD 88 (216)
Q Consensus 30 ~~n~~li~~~~~~iliD~g~~~~--------------------~~~~~~~~~~l~~~~~-~i~~v~~TH~H~DH~gg~~~ 88 (216)
..+|++|+.+++.+|||+|.... ....+.+...|...+. +|++||+||.|.||++|+..
T Consensus 17 qg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vilTH~H~DHiggl~~ 96 (547)
T 2bib_A 17 GSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIGNVDE 96 (547)
T ss_dssp BCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEECCCSCHHHHTTHHH
T ss_pred CceEEEEEeCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEEcCCCccccCCHHH
Confidence 46899999999999999997521 0013455666666565 69999999999999999999
Q ss_pred HHhhcCCCcceEeccCCCCcccccccCC--------------CCCCCcee--ecCCCCeEEECCeeEEEEeCC-C-CC--
Q psy1547 89 IFEHINPDSATIWKFKGTEKDEAQATDF--------------VPENKTVQ--TLTDGQLLKVEGATLRVIHTP-G-HT-- 148 (216)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------------~~~~~~~~--~~~~~~~~~~g~~~i~~~~~p-g-Ht-- 148 (216)
+.++++. .+++.++............ .....+.. .+..++.+.+|+.++++++++ + |+
T Consensus 97 l~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~g~~~i~~l~~~~~~h~~~ 174 (547)
T 2bib_A 97 LLSTYPV--DRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQFGDMDIQLYNYENETDSSG 174 (547)
T ss_dssp HHHHSCB--SEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEETTEEEEEESCSCCBCTTS
T ss_pred HHHhCCc--cEEEECcccccccCChHHHHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEecCCeeEEEecCccccCccc
Confidence 9998763 2577665443221100000 00011222 356788999999999999752 2 42
Q ss_pred ---------CCceEEEEC--CCcEEEEcceecCCCccccccHHHHHHHHHHHHcCCCC-eEEcCCC
Q psy1547 149 ---------TDHIVLKLE--EENVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPD-IIYPAHG 202 (216)
Q Consensus 149 ---------~~~~~~~~~--~~~vl~~GD~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-~v~pgHg 202 (216)
.+++++.+. +.++||+||+-... ..++ .+... .+++| +++|.||
T Consensus 175 ~~~~~~~~n~~S~vl~i~~~~~~iLftGD~~~~~------~~e~---~l~~~-~~~~DvLkv~HHG 230 (547)
T 2bib_A 175 ELKKIWDDNSNSLISVVKVNGKKIYLGGDLDNVH------GAED---KYGPL-IGKVDLMKFNHHH 230 (547)
T ss_dssp CBCCBSSGGGGCCEEEEEETTEEEEECTTCCSTT------SHHH---HHHHH-HCCCSEEECTTTT
T ss_pred cccccCCCCCCcEEEEEEECCEEEEecCCccchh------hhhh---hhccc-ccceeEEEecccc
Confidence 457778775 67899999964321 1121 12222 25788 6678887
No 58
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.63 E-value=2.4e-15 Score=119.59 Aligned_cols=125 Identities=19% Similarity=0.236 Sum_probs=85.9
Q ss_pred CCCCceEEEEec----CCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhc--CC--Ccc
Q psy1547 27 TLQGTNTYILGT----GSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHI--NP--DSA 98 (216)
Q Consensus 27 ~~~~~n~~li~~----~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~--~~--~~~ 98 (216)
..++.||++|+. +++.+|||||.+. .+.+.+ ......+|++|++||.|.||++|+..+...+ .. ..+
T Consensus 16 ~~r~~~~~li~~~~~~~~~~iliD~G~~~----~~~l~~-~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~ 90 (306)
T 2cbn_A 16 RTRNVTAILLNLQHPTQSGLWLFDCGEGT----QHQLLH-TAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPL 90 (306)
T ss_dssp SSCCBCEEEEECCCSSCCCEEEECCCTTH----HHHHHT-SCCCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCE
T ss_pred CCCCCCEEEEEeecCCCCcEEEEECCHHH----HHHHHH-hCCCHHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCe
Confidence 345689999998 8889999999862 122211 1112347999999999999999999887642 11 237
Q ss_pred eEeccCCCCcccccc----cCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEEC
Q psy1547 99 TIWKFKGTEKDEAQA----TDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLE 157 (216)
Q Consensus 99 ~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~ 157 (216)
+++.++......... ..+.........+++++.+.+++.++++++++ |+.+++++.+.
T Consensus 91 ~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~-H~~~~~gy~i~ 152 (306)
T 2cbn_A 91 TIYGPQGIREFVETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLE-HPLECYGYRIE 152 (306)
T ss_dssp EEEESTTHHHHHHHHHHHTTCCCSSCEEEEECCSEEEEECSSEEEEEEECB-SSSCCEEEEEE
T ss_pred EEEcCccHHHHHHHHHHhhccCCCceEEEEEcCCCcEeecCCEEEEEEEcc-CCCCccEEEEE
Confidence 888876543322111 11111123567788899999999999999988 88888888763
No 59
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.62 E-value=3.5e-15 Score=119.38 Aligned_cols=122 Identities=18% Similarity=0.280 Sum_probs=83.9
Q ss_pred CCCCceEEEEec---CCceEEEecCCCCChhHHHHHHHHHhhC---CCCccEEEecccCccccCChHHHHhhc--CC--C
Q psy1547 27 TLQGTNTYILGT---GSRRLLLDTGEPDHMEYIENLKQVLNKE---SISLEHIVLSHWHNDHVGGLKDIFEHI--NP--D 96 (216)
Q Consensus 27 ~~~~~n~~li~~---~~~~iliD~g~~~~~~~~~~~~~~l~~~---~~~i~~v~~TH~H~DH~gg~~~~~~~~--~~--~ 96 (216)
..++.||++|+. ++..+|||||.+. . +.+... ..+|++|++||.|+||++|+..+...+ .. .
T Consensus 15 ~~r~~~~~li~~~~~~~~~iLiD~G~~~----~----~~l~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~ 86 (320)
T 1y44_A 15 KARNVTSVALKLLEERRSVWLFDCGEAT----Q----HQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGED 86 (320)
T ss_dssp SSCCBCEEEEEETTTTSEEEEECCCTTH----H----HHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCS
T ss_pred ccCCCCEEEEEEecCCCcEEEEECCHHH----H----HHHHHcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCC
Confidence 345689999998 8889999999862 1 122222 236899999999999999999887753 11 1
Q ss_pred cceEeccCCCCcccccc---c-CCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEEC
Q psy1547 97 SATIWKFKGTEKDEAQA---T-DFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLE 157 (216)
Q Consensus 97 ~~~i~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~ 157 (216)
.++++.++......... . .+.........+++++.+.+|+.+++.+++ +|++++++|.++
T Consensus 87 ~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~p~-~H~~~~~gy~i~ 150 (320)
T 1y44_A 87 ELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSV-IHGVEAFGYRVQ 150 (320)
T ss_dssp CEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEECCSEEEEECSSEEEEEEEC-BSSSSBEEEEEE
T ss_pred CEEEEeCHHHHHHHHHHHHhhccCCCCceEEEEcCCCceEecCCEEEEEEEc-cCCCCcceEEEe
Confidence 37888877543322111 0 011112356678889999999877777774 599999888764
No 60
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.61 E-value=1.8e-15 Score=118.72 Aligned_cols=115 Identities=17% Similarity=0.265 Sum_probs=79.5
Q ss_pred ceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHh----hcC--CCcceEeccC
Q psy1547 31 TNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFE----HIN--PDSATIWKFK 104 (216)
Q Consensus 31 ~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~----~~~--~~~~~i~~~~ 104 (216)
++++.+ ++..+|||||.+.. +.+.....++++|++||.|.||++|+..+.. .++ ...++++.++
T Consensus 12 ~~~~~i--~~~~iLiD~G~~~~--------~~l~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~ 81 (280)
T 2e7y_A 12 STWIYY--SPERILFDAGEGVS--------TTLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPE 81 (280)
T ss_dssp EEEEEE--GGGTEEEEECTTHH--------HHHGGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEET
T ss_pred eEEEEE--CCcEEEEECCcchH--------HHhccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECc
Confidence 445555 36789999997621 1234445579999999999999999998852 232 1237888877
Q ss_pred CCCcccccc-------cCCCCCCCceeecCCCCeEEEC-----CeeEEEEeCCCCCCC--ceEEEEC
Q psy1547 105 GTEKDEAQA-------TDFVPENKTVQTLTDGQLLKVE-----GATLRVIHTPGHTTD--HIVLKLE 157 (216)
Q Consensus 105 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g-----~~~i~~~~~pgHt~~--~~~~~~~ 157 (216)
... ..... ............+++|+.+.+| +.+++++++ +|+++ ++++.+.
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~-~H~~~~~~~g~~i~ 146 (280)
T 2e7y_A 82 GNR-AVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRT-KHVSSEVSFGYHIF 146 (280)
T ss_dssp TCH-HHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEEC-CSCSSSCCEEEEEE
T ss_pred cHH-HHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEEc-cCCCCCceEEEEEE
Confidence 654 22110 0011112356788999999998 889999997 89999 9999874
No 61
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.60 E-value=5.5e-16 Score=134.87 Aligned_cols=136 Identities=21% Similarity=0.235 Sum_probs=93.2
Q ss_pred CceEEEEecCCceEEEecCCCCChhH-HHHHHHH-----H--hhCCCCccEEEecccCccccCChHHHHhhc-CCCcceE
Q psy1547 30 GTNTYILGTGSRRLLLDTGEPDHMEY-IENLKQV-----L--NKESISLEHIVLSHWHNDHVGGLKDIFEHI-NPDSATI 100 (216)
Q Consensus 30 ~~n~~li~~~~~~iliD~g~~~~~~~-~~~~~~~-----l--~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~-~~~~~~i 100 (216)
+.||++|+.+++.+|||||....... -...... + ...+.+|++|++||.|.||+||++++.+.. . .+++
T Consensus 201 g~s~~LI~~~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~~~~~--~~pI 278 (651)
T 3af5_A 201 GRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFRYNLF--DGPI 278 (651)
T ss_dssp SCCEEEEEESSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHHTTCC--CSCE
T ss_pred CCcEEEEEECCcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHhhcCHHHHHhcCCC--CceE
Confidence 57999999999999999998743210 0111111 1 111157999999999999999999998742 1 2688
Q ss_pred eccCCCCcccccc----------cCCCCCC---------CceeecCCCCeEEE-CCeeEEEEeCCCCCCCceEEEEC--C
Q psy1547 101 WKFKGTEKDEAQA----------TDFVPEN---------KTVQTLTDGQLLKV-EGATLRVIHTPGHTTDHIVLKLE--E 158 (216)
Q Consensus 101 ~~~~~~~~~~~~~----------~~~~~~~---------~~~~~~~~~~~~~~-g~~~i~~~~~pgHt~~~~~~~~~--~ 158 (216)
|+++......... ....... .....++.++.+.+ ++.++++++ +||++|++++.++ +
T Consensus 279 y~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~~-~gH~~Gs~~~~i~~~~ 357 (651)
T 3af5_A 279 YTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHN-AGHILGSAIVHLHIGN 357 (651)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEE-CSSSTTCEEEEEEETT
T ss_pred EEcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEec-CCCCcCcEEEEEEECC
Confidence 8876443221100 0000000 13567889999999 999999855 8999999999986 5
Q ss_pred C--cEEEEccee
Q psy1547 159 E--NVVFSGDTI 168 (216)
Q Consensus 159 ~--~vl~~GD~~ 168 (216)
+ +++|+||+-
T Consensus 358 ~~~~ilftGD~~ 369 (651)
T 3af5_A 358 GLHNIAITGDFK 369 (651)
T ss_dssp TTTCEEECCSCC
T ss_pred CceEEEEeCCCC
Confidence 6 899999983
No 62
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.55 E-value=2.1e-14 Score=116.77 Aligned_cols=169 Identities=14% Similarity=0.189 Sum_probs=102.1
Q ss_pred CceEEEEecC-CceEEEe--cCCCCCh----hH--HHHHHHH----------------Hhh-CCCCccEEEecccCcccc
Q psy1547 30 GTNTYILGTG-SRRLLLD--TGEPDHM----EY--IENLKQV----------------LNK-ESISLEHIVLSHWHNDHV 83 (216)
Q Consensus 30 ~~n~~li~~~-~~~iliD--~g~~~~~----~~--~~~~~~~----------------l~~-~~~~i~~v~~TH~H~DH~ 83 (216)
+++|++|+.+ +..|||| +|.+... .. -.++.+. +.. ...++++|++||.|.||+
T Consensus 44 G~s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~~~~l~~id~VliTH~H~DHi 123 (360)
T 2wyl_A 44 GCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHI 123 (360)
T ss_dssp ETTEEEEECTTCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCCGGGCCCCSEEECSBSCTTTC
T ss_pred cccEEEEEeCCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCcccCCCccCHHHcCCCCEEEECCCchhcC
Confidence 5789999985 8899999 6654210 00 0001100 111 013699999999999999
Q ss_pred C--ChHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCC-----------CCCCC
Q psy1547 84 G--GLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTP-----------GHTTD 150 (216)
Q Consensus 84 g--g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p-----------gHt~~ 150 (216)
+ ++..+.++++ ..++++.+..........+ . .......++.|+.+.+++.+++++++. ||++|
T Consensus 124 g~~~l~~l~~~~~-~~~~v~~p~~~~~~l~~~g--~-~~~~~~~l~~g~~~~~g~~~v~~~~~~H~~~~~~~~~~~h~~g 199 (360)
T 2wyl_A 124 DVNVAAAVMQNCA-DDVPFIGPKTCVDLWIGWG--V-PKERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAG 199 (360)
T ss_dssp CHHHHHHHHHHSC-TTCCEEECHHHHHHHHHHT--C-CGGGEEECCTTCEEEETTEEEEEEECCCC--------------
T ss_pred CHHHHHHHHhcCC-CCCEEEEcHHHHHHHHHcC--C-ChheEEEcCCCCEEEECCEEEEEEeccCccccccccccccccc
Confidence 7 3556666543 1367777654322221111 1 123577889999999999999999873 34444
Q ss_pred ---------ceEEEEC--CCcEEEEcceecCCCccc-----------------------cccHHHHHHHHHHHHcCCCCe
Q psy1547 151 ---------HIVLKLE--EENVVFSGDTILGEGTTV-----------------------FSDLISYIESLRRIRSLKPDI 196 (216)
Q Consensus 151 ---------~~~~~~~--~~~vl~~GD~~~~~~~~~-----------------------~~~~~~~~~~l~~l~~~~~~~ 196 (216)
++++.++ +.+++|+||+.+...... ..+.+ ++++.+..++++.
T Consensus 200 ~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~g~~~~~~~~h~~~~---ea~~~~~~l~~k~ 276 (360)
T 2wyl_A 200 VLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSA---DMLRMGEALNAKV 276 (360)
T ss_dssp ----CCTTTBEEEEEEETTEEEEECTTCCCCTTHHHHHHHSCCCEEEEEBCCCCTTCCCSBCHH---HHHHHHHHHTCSE
T ss_pred ccccccCcccEEEEEEECCcEEEEeCCCCcCHHHHHHhhCCCCCEEEecCCCCcccccCCCCHH---HHHHHHHHhCCCE
Confidence 5777774 678999999865432100 01223 3455555668999
Q ss_pred EEcCCCccc
Q psy1547 197 IYPAHGPVV 205 (216)
Q Consensus 197 v~pgHg~~~ 205 (216)
+++.|...+
T Consensus 277 vi~~H~~~~ 285 (360)
T 2wyl_A 277 VIPFHHDIW 285 (360)
T ss_dssp EEEESTTTB
T ss_pred EEEEeeccc
Confidence 999997664
No 63
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.55 E-value=1e-13 Score=109.15 Aligned_cols=172 Identities=18% Similarity=0.284 Sum_probs=101.4
Q ss_pred CCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCCCc
Q psy1547 29 QGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEK 108 (216)
Q Consensus 29 ~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~ 108 (216)
...+|++|+.+++.+|||+|.+. ...+. .+.++....+|++|++||.|+||++|+..+.+.++. +++|.++....
T Consensus 31 ~~g~s~li~~~~~~iLiD~G~~~--~~~~~-l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~~~~--~~v~~~~~~~~ 105 (284)
T 2p4z_A 31 EHGLSLLLKKGNKEIVVDTGQSE--NFIKN-CGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERNPE--VKIYTHKEILN 105 (284)
T ss_dssp CSSCEEEEEETTEEEEECCCSST--HHHHH-HHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHCTT--CEEEEEGGGGS
T ss_pred CCEEEEEEEECCeEEEEeCCCCH--HHHHH-HHHcCCChhhCCEEEECCCCchhhccHHHHHHHcCC--CceecCHHHHH
Confidence 35789999999999999999862 11222 222222233699999999999999999999877643 67887765432
Q ss_pred ccccccC----CCCC---------CCceeecCCCCeEEECCeeEEEEeCCCC----------------------CCCceE
Q psy1547 109 DEAQATD----FVPE---------NKTVQTLTDGQLLKVEGATLRVIHTPGH----------------------TTDHIV 153 (216)
Q Consensus 109 ~~~~~~~----~~~~---------~~~~~~~~~~~~~~~g~~~i~~~~~pgH----------------------t~~~~~ 153 (216)
....... .+.. ..+...++.. ..+++.-+.+-++|++ .++..+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~i~~gi~~i~~~~~~h~~~~~~g~~~~~~~~~y~~D~~~de~~ 183 (284)
T 2p4z_A 106 KKYAMRKGGQFEEIGFDLSFYEKYKNNFVLIDKD--AEIEEGFYVITNTDITYDNEFTTKNFFVEKEGKRIPDKFLDEVF 183 (284)
T ss_dssp CEEEECSSSCEEECSCCHHHHHHHGGGEEEESSC--EEEETTEEEECSCCCCSCCHHHHTTEEEEETTEEEECCCTTCCE
T ss_pred HHhccCccccccccccccchhhhcCceEEEeCCC--eEEeCCEEEEeeeCCccccccCCCceEEEcCCCEecCCCCCceE
Confidence 1110000 0000 0123333322 3332211222244543 223345
Q ss_pred EEECCCc--EEEEcce-------e------cC---------CCccccccHHHHHHHHHHHHcCCCCeEEcCCCccccC
Q psy1547 154 LKLEEEN--VVFSGDT-------I------LG---------EGTTVFSDLISYIESLRRIRSLKPDIIYPAHGPVVEV 207 (216)
Q Consensus 154 ~~~~~~~--vl~~GD~-------~------~~---------~~~~~~~~~~~~~~~l~~l~~~~~~~v~pgHg~~~~~ 207 (216)
.++++.+ ++++|+. + ++ .......+...+.++++.+++.+++.++++|..+...
T Consensus 184 ~~~~~~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~igg~Hl~~~~~~~~~~a~~~~~~~~~~~l~l~H~~~~~~ 261 (284)
T 2p4z_A 184 VVVKEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKIEEYGVKKVLTGHCTGIDE 261 (284)
T ss_dssp EEEEETTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEECCCCTTCCHHHHHHHHHHHHHTTBCCEEECGGGCHHH
T ss_pred EEEEcCCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEEEcccCCCCCHHHHHHHHHHHHcCCCCEEEeeCcCcHHH
Confidence 5555555 7788864 1 11 1111224556788999999999999999999887643
No 64
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.54 E-value=7.7e-14 Score=113.69 Aligned_cols=79 Identities=23% Similarity=0.343 Sum_probs=55.8
Q ss_pred CccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcC--------C
Q psy1547 24 GPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHIN--------P 95 (216)
Q Consensus 24 ~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~--------~ 95 (216)
.+...++.||++|+.++..+|||||.+. ...+.+ ......+|++||+||.|.||++|+..+...+. .
T Consensus 12 ~p~~~r~~ss~ll~~~~~~iLiD~G~g~----~~~l~~-~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~ 86 (368)
T 3zwf_A 12 YPSPTRGASAVVLRCEGECWLFDCGEGT----QTQLMK-SQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSK 86 (368)
T ss_dssp SCCSSSCSSEEEEEETTEEEEECCCTTH----HHHHHH-SSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------
T ss_pred CCCCCCCccEEEEEECCeEEEEeCChhH----HHHHHH-cCCChHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCC
Confidence 3444567899999999999999999762 122222 11112379999999999999999998876531 1
Q ss_pred CcceEeccCCCC
Q psy1547 96 DSATIWKFKGTE 107 (216)
Q Consensus 96 ~~~~i~~~~~~~ 107 (216)
..+.+|.+....
T Consensus 87 ~~l~iygp~~~~ 98 (368)
T 3zwf_A 87 QPIEIYGPVGLR 98 (368)
T ss_dssp CCEEEEEETTHH
T ss_pred CCeEEEEcHHHH
Confidence 137888876543
No 65
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.51 E-value=4.5e-14 Score=112.98 Aligned_cols=133 Identities=13% Similarity=0.126 Sum_probs=91.6
Q ss_pred CCceEEEEecCCce-EEEecCCCCChhHHHHHHHHHh------hCCCCccEEEecccCccccCChHHHHhhcCCCcceEe
Q psy1547 29 QGTNTYILGTGSRR-LLLDTGEPDHMEYIENLKQVLN------KESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIW 101 (216)
Q Consensus 29 ~~~n~~li~~~~~~-iliD~g~~~~~~~~~~~~~~l~------~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~ 101 (216)
+..+|++|+.+++. +|||||.+. .+++.+... ....+|++||+||.|.||++|+..+.... .+++|
T Consensus 39 R~~ss~li~~~~~~~iLiD~G~~~----~~~l~~~~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~~~---~~~vy 111 (321)
T 3jxp_A 39 RTQSSIALSDDGVHWILCNASPDI----RAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGC---PHQVW 111 (321)
T ss_dssp BCBCEEEEESSSSSEEEECCCTTH----HHHHHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGGGC---CEEEE
T ss_pred ccceEEEEEeCCceEEEEeCCchH----HHHHHhcccccccccCCcccCCEEEECCCChhhhhhHHHHHhcC---CCeEE
Confidence 45779999988775 999999762 122222110 01347999999999999999999997643 38899
Q ss_pred ccCCCCccccc-c---c--CCCCCCCceeecCCCCeEEE---CCeeEEEEeCC-------CCCC-----CceEEEEC---
Q psy1547 102 KFKGTEKDEAQ-A---T--DFVPENKTVQTLTDGQLLKV---EGATLRVIHTP-------GHTT-----DHIVLKLE--- 157 (216)
Q Consensus 102 ~~~~~~~~~~~-~---~--~~~~~~~~~~~~~~~~~~~~---g~~~i~~~~~p-------gHt~-----~~~~~~~~--- 157 (216)
+++........ + . ...........++.++.+.+ ++.+|+.++++ -|.+ ..+.|.+.
T Consensus 112 ~~~~~~~~l~~~~~~f~~~~~~~~~i~~~~i~~g~~~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~ 191 (321)
T 3jxp_A 112 CTDMVHQDLTTGFPLFNMLSHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTR 191 (321)
T ss_dssp ECHHHHHHTTTTSCHHHHHTTTTTCEEEEECCSSSCEECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETT
T ss_pred ECHHHHHHHHhhCccccccccccCceeEEEcCCCCeEEeccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEecC
Confidence 87644332211 0 0 00011235677888999999 99999999886 3664 67888875
Q ss_pred -CCcEEEEccee
Q psy1547 158 -EENVVFSGDTI 168 (216)
Q Consensus 158 -~~~vl~~GD~~ 168 (216)
+.+++|+||+-
T Consensus 192 ~g~~i~y~~Dt~ 203 (321)
T 3jxp_A 192 TGGKLFYAPGLG 203 (321)
T ss_dssp TCCEEEEESSCC
T ss_pred CCcEEEEECCCC
Confidence 35799999974
No 66
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.50 E-value=1e-13 Score=113.41 Aligned_cols=172 Identities=16% Similarity=0.244 Sum_probs=105.0
Q ss_pred CceEEEEecC-CceEEEe--cCCCCCh------hHHHHHHHH----------------Hhh-CCCCccEEEecccCcccc
Q psy1547 30 GTNTYILGTG-SRRLLLD--TGEPDHM------EYIENLKQV----------------LNK-ESISLEHIVLSHWHNDHV 83 (216)
Q Consensus 30 ~~n~~li~~~-~~~iliD--~g~~~~~------~~~~~~~~~----------------l~~-~~~~i~~v~~TH~H~DH~ 83 (216)
+++|++|+.+ +..|||| +|.+... ..-.++.+. +.. ...++++|++||.|.||+
T Consensus 68 G~s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~~~~~~~iD~IliTH~H~DHi 147 (379)
T 3bv6_A 68 GCTGIWLKSAGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFAIKEIDAVLASHDHADHI 147 (379)
T ss_dssp ETTEEEEEETTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGGCCCCSEEECSBCSGGGC
T ss_pred cccEEEEEeCCCCEEEEccCCCCCccccccccccccchhheecCccccCccccCCCCccChHHCCCCCEEEECCCCcccC
Confidence 5789999985 8899999 5543210 000001111 111 023699999999999999
Q ss_pred C--ChHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCC----------CCC--C
Q psy1547 84 G--GLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTP----------GHT--T 149 (216)
Q Consensus 84 g--g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p----------gHt--~ 149 (216)
+ ++..+.++++ ..++++.+..........+ . ....+..++.|+.+.+++.+++++++. +|+ +
T Consensus 148 g~~~l~~l~~~~~-~~~~v~~~~~~~~~l~~~g--~-~~~~~~~l~~g~~~~~g~~~v~~~~~~H~~~~~~~p~~h~~~~ 223 (379)
T 3bv6_A 148 DVNVAAAVLQNCG-EHVKFIGPQACVDLWLGWG--V-PQERCIVAKVGDVLEIGDVKIRVLDSFDRTALVTLPKGVSSYD 223 (379)
T ss_dssp CHHHHHHHHHHSC-TTCEEEECHHHHHHHHHHT--C-CGGGEEECCTTCEEEETTEEEEEEECCCHHHHTCCCTTSCSSC
T ss_pred ChHHHHHHHhcCC-CCcEEEecHHHHHHHHHcC--C-ChhhEEEeCCCCEEEECCEEEEEEecccccccccccccccccc
Confidence 7 4566666553 1378887654332221111 1 123577889999999999999999873 222 2
Q ss_pred C---------ceEEEEC--CCcEEEEcceecCCCccc-------------ccc-------HHHHHHHHHHHHcCCCCeEE
Q psy1547 150 D---------HIVLKLE--EENVVFSGDTILGEGTTV-------------FSD-------LISYIESLRRIRSLKPDIIY 198 (216)
Q Consensus 150 ~---------~~~~~~~--~~~vl~~GD~~~~~~~~~-------------~~~-------~~~~~~~l~~l~~~~~~~v~ 198 (216)
| ++++.++ +.+++|+||+.+...... +.+ -....++++.+..++++.++
T Consensus 224 G~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~g~~~~~~~~h~~~~ea~~~~~~l~~k~vi 303 (379)
T 3bv6_A 224 KAILDGMDERAVNYLIETSGGSVYHSGDSHYSNYYAKHGNDYQIDVALLSYGENPRGVTDKMTSSDVLRAAESLDCQVVV 303 (379)
T ss_dssp GGGGGCHHHHBEEEEEEETTEEEEECTTCCCCTTHHHHHHHSCCSEEEEEBCCCCTTCCCSBCHHHHHHHHHHHTCSEEE
T ss_pred cccccccCCceEEEEEEeCCeEEEEeCCCCccHHHHHHhhcCCCCEEEecCCCCcccccccCCHHHHHHHHHHcCCCEEE
Confidence 2 5777774 678999999865432100 000 01223445555566899999
Q ss_pred cCCCccc
Q psy1547 199 PAHGPVV 205 (216)
Q Consensus 199 pgHg~~~ 205 (216)
|.|....
T Consensus 304 ~~H~~~~ 310 (379)
T 3bv6_A 304 PFHHDIW 310 (379)
T ss_dssp EESTTSB
T ss_pred EEeeccc
Confidence 9997665
No 67
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.47 E-value=1.8e-13 Score=106.64 Aligned_cols=162 Identities=18% Similarity=0.122 Sum_probs=99.7
Q ss_pred CceEEEEecCCceEEEecCCCCChh---HHH----HHH-------HHHhhCCCCccEEEecccCccccCChHHHHhhcCC
Q psy1547 30 GTNTYILGTGSRRLLLDTGEPDHME---YIE----NLK-------QVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINP 95 (216)
Q Consensus 30 ~~n~~li~~~~~~iliD~g~~~~~~---~~~----~~~-------~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~ 95 (216)
+.+|++|+.++..+||||+...... +.. ... -.+.....++++|++||.|.||+++...+..+.
T Consensus 11 Gha~~li~~~g~~iLiDp~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~DH~~~~~~~~~~~-- 88 (264)
T 3rpc_A 11 RNATGKLTIKNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLDHWDDTAINSIPK-- 88 (264)
T ss_dssp ETTEEEEEETTEEEEESCCCCCTTCBCCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCGGGSCHHHHHHSCT--
T ss_pred eCcEEEEEECCEEEEeCcccCCCcCccCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCchhhCCCHHHHhhcc--
Confidence 5789999999999999997643100 000 000 000111125899999999999999998876642
Q ss_pred CcceEecc-CCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCC--------------ceEEEEC---
Q psy1547 96 DSATIWKF-KGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTD--------------HIVLKLE--- 157 (216)
Q Consensus 96 ~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~--------------~~~~~~~--- 157 (216)
.++++.+ ..........+ ......+ ++++.+|+.+|+++++. |+++ .++|.++
T Consensus 89 -~~~v~~~~~~~~~~l~~~g-----~~~~~~~--~~~~~~~~~~i~~~pa~-H~~~~~~~~p~~~~~~~~~~g~~i~~~~ 159 (264)
T 3rpc_A 89 -SLPIFVQNTADKELITSQG-----FIDVRII--FESLEFNGITLRKTGGS-HGTVEMYANPVLAPLAGDAMGVIFEAAD 159 (264)
T ss_dssp -TSCEEESSHHHHHHHHHTT-----CSCEEEC--SSEEEETTEEEEEECCC-SSCHHHHTSTTHHHHHCCCCEEEEECTT
T ss_pred -CCeEEEeCHHHHHHHHhcC-----CCeeEEe--cccEEECCEEEEEeccc-cCCccccccccccccccccEEEEEEeCC
Confidence 3778876 32222211111 1123333 57899999888887754 7764 3667665
Q ss_pred CCcEEEEcceecCCCc--------------------------cccccHHHHHHHHHHHHcCCCCeEEcCCCccc
Q psy1547 158 EENVVFSGDTILGEGT--------------------------TVFSDLISYIESLRRIRSLKPDIIYPAHGPVV 205 (216)
Q Consensus 158 ~~~vl~~GD~~~~~~~--------------------------~~~~~~~~~~~~l~~l~~~~~~~v~pgHg~~~ 205 (216)
+.+++|+||+.+.... ...-+.+ ++++.++.++++.++|.|-..+
T Consensus 160 ~~~i~~~GDt~~~~~~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~---ea~~~~~~l~~~~vi~~H~~~~ 230 (264)
T 3rpc_A 160 EPTVYLVGDTVWTSDVEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTK---DIGRMVVRKPEAKIIAVHMDTV 230 (264)
T ss_dssp SCCEEECCSCCSCHHHHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHH---HHHHHHHHCTTSEEEEESCSSS
T ss_pred ccEEEEECCcCchHHHHHHHHHhCCCEEEEecCccccccccCCcccCHH---HHHHHHHhCCcCeEEEEccccc
Confidence 4689999998653211 0112233 4444455678899999997653
No 68
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.41 E-value=7.6e-13 Score=100.37 Aligned_cols=133 Identities=18% Similarity=0.150 Sum_probs=84.2
Q ss_pred CCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCCCc
Q psy1547 29 QGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEK 108 (216)
Q Consensus 29 ~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~ 108 (216)
.+.+|++|+.++..+|||||.+.. .+.....++++|++||.|.||++ ...+. . ...++
T Consensus 18 ~~~~~~li~~~~~~iLiD~g~~~~---------~~~~~~~~id~VliTH~H~DH~~-~~~l~---~--~~~vi------- 75 (220)
T 1vjn_A 18 FGHACFALEMEGKTIVTDPFDESV---------GYPIPNVTADVVTESHQHFDHNA-HHLVK---G--NFRVI------- 75 (220)
T ss_dssp EETTEEEEEETTEEEEESCCC--------------CCCCCBCSEEECSSCC---CG-GGGCB---S--SCEEE-------
T ss_pred ccCCEEEEEECCEEEEEcCCCCcC---------CCCcCCCCcCEEEECCCCCCCCC-chHhc---C--CCEEE-------
Confidence 357899999999999999997621 12222357999999999999998 65443 1 12221
Q ss_pred ccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCC------Cc-eEEEEC--CCcEEEEcceecCCCc------
Q psy1547 109 DEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTT------DH-IVLKLE--EENVVFSGDTILGEGT------ 173 (216)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~------~~-~~~~~~--~~~vl~~GD~~~~~~~------ 173 (216)
..+..+.+++.+++++++. |++ |. +++.++ +.+++|+||+.+....
T Consensus 76 ------------------~~~g~~~~~~~~I~~~~~~-H~~~~g~~~g~~~g~~i~~~g~~i~~~GDt~~~~~~~~~~~~ 136 (220)
T 1vjn_A 76 ------------------DRPGAYTVNGVKIKGVETF-HDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLTPAQVEEI 136 (220)
T ss_dssp ------------------CSSEEEEETTEEEEEEEEE-EC-------CEEEEEEEEETTEEEEECTTCCSCCCHHHHHHH
T ss_pred ------------------cCCCeEEECCEEEEEEeee-cCCCCCccCCCcEEEEEEECCeEEEEeCCCCCcchHHHHHhh
Confidence 1122677888889988876 665 33 777775 5689999998654320
Q ss_pred ------------cccccHHHHHHHHHHHHcCCCCeEEcCCCccc
Q psy1547 174 ------------TVFSDLISYIESLRRIRSLKPDIIYPAHGPVV 205 (216)
Q Consensus 174 ------------~~~~~~~~~~~~l~~l~~~~~~~v~pgHg~~~ 205 (216)
....+.++..+.++ +++++.++|.|-...
T Consensus 137 ~~~Dvlil~~g~~~h~~~~~a~~~~~---~~~~k~vi~~H~~~~ 177 (220)
T 1vjn_A 137 GEIDVLLVPVGGTYTIGPKEAKEVAD---LLNAKVIIPMHYKTK 177 (220)
T ss_dssp CCCSEEEEECCSSSSCCHHHHHHHHH---HTTCSEEEEESCCCS
T ss_pred CCCCEEEEcCCCcCcCCHHHHHHHHH---hcCCCEEEEEecccc
Confidence 01124455444444 467899999996665
No 69
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.36 E-value=3.9e-13 Score=109.25 Aligned_cols=112 Identities=14% Similarity=0.188 Sum_probs=81.3
Q ss_pred EecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCCCcccccccC
Q psy1547 36 LGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATD 115 (216)
Q Consensus 36 i~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 115 (216)
+..++..++||+... ....+|++||+||.|.||++|+.. .+ .+++++++.+........
T Consensus 32 ~~~pG~~ilVD~f~~--------------~~~~~IdaI~lTH~H~DHiggl~~---~~---~~pIy~s~~t~~ll~~~l- 90 (367)
T 4b87_A 32 KKIPGTGFTVDAFQY--------------GVVEGCTAYFLTHFHSDHYAGLSK---HF---TFPVYCSEITGNLLKNKL- 90 (367)
T ss_dssp GBCTTSSEEESCCSS--------------SSCTTCCEEECCCCCHHHHTTCST---TC---CSCEEECHHHHHHHHHHS-
T ss_pred EEECCCeEEEeCCCc--------------CCccCCcEEEECcChHHHhCCccc---cc---CCcEEECHHHHHHHHHHh-
Confidence 345677899998532 113479999999999999999983 22 268888765543222111
Q ss_pred CCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEEC--CC-cEEEEcceecC
Q psy1547 116 FVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLE--EE-NVVFSGDTILG 170 (216)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~--~~-~vl~~GD~~~~ 170 (216)
. ........++.++.+.+|+.++++++ +||++|++++.++ ++ +++|+||+.+.
T Consensus 91 ~-~~~~~~~~l~~g~~~~ig~~~v~~~~-agH~~gs~~~~i~~~~g~~il~tGD~~~~ 146 (367)
T 4b87_A 91 H-VQEQYIHPLPLDTECIVNGVKVVLLD-ANHCPGAVMILFYLPNGTVILHTGDFRAD 146 (367)
T ss_dssp C-CCGGGEEECCBTSCEEETTEEEEEEE-CSSSTTCEEEEEECTTSCEEEECCSCCCC
T ss_pred c-cccceEEEeCCCCEEEECCEEEEEEe-CCCcCCcEEEEEEcCCCcEEEEecCcccC
Confidence 0 11235678889999999999999988 7899999999995 34 49999998643
No 70
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=99.36 E-value=1.1e-11 Score=96.30 Aligned_cols=158 Identities=19% Similarity=0.253 Sum_probs=92.2
Q ss_pred CCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCc-cEEEecccCccccCChHHHHhhcCCCcceEeccCCCC
Q psy1547 29 QGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISL-EHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTE 107 (216)
Q Consensus 29 ~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i-~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~ 107 (216)
...+|++|++ +|||||... .+.+.+.+.+.++ ++|++||.|+||+||+..+ + .++++.++...
T Consensus 30 ~~G~s~lie~----iLiD~G~~~------~l~~~l~~~gi~~~~~IvlTH~H~DH~ggl~~l----~--~~~v~~~~~~~ 93 (267)
T 3h3e_A 30 EHGFSVLVDS----VLFDTGKSD------VFLKNARKLGIDLPKDVLISHGHYDHAGGLLYL----S--GKRVWLRKEAL 93 (267)
T ss_dssp CSSCEEEETT----EEECCCSSS------HHHHHHHHTTCCCCSEEECSCSCHHHHGGGGGC----C--SCEEEEEGGGG
T ss_pred CcEeHHeeee----EEEECCCcH------HHHHHHHHCCcCcCCEEEECCCChhhhCCHHHh----c--CCEEEECHHHH
Confidence 3467999986 999999873 2445555555544 9999999999999999988 2 26888876544
Q ss_pred cccccccCCCCC--------CCceeecCCCCeEEECCeeEEEEeCC----------------C-----CCCCceEEEEC-
Q psy1547 108 KDEAQATDFVPE--------NKTVQTLTDGQLLKVEGATLRVIHTP----------------G-----HTTDHIVLKLE- 157 (216)
Q Consensus 108 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~i~~~~~p----------------g-----Ht~~~~~~~~~- 157 (216)
............ ..++..++....+ ..| +.++..| | ...+..++.++
T Consensus 94 ~~~~~~~~~ig~~~~~~~~~~~~~~~v~~~~eI-~pg--v~~~g~~r~~~~e~~~~~~~~~~g~~~~D~~~de~~Lvi~~ 170 (267)
T 3h3e_A 94 DQKYSGERYAGADWNEVLYYNTGKFVIERITEI-GKN--MFLLGPANLRGKVPTGDFFVERNGERRKDLFEDEQTLVVRT 170 (267)
T ss_dssp SEEEETTEECCCCHHHHHHHSEEEEECSSEEEE-ETT--EEEECSCCCTTCCCCSCEEEESSSCEEECCCTTCCEEEEEE
T ss_pred HhhhccccccCCCccHHHhcCCcEEEeCCCeEE-cCC--cEEeCCCCCcccccCCCceEEeCCccccCCCCCcEEEEEEc
Confidence 322111000000 0122222222111 112 2222111 1 11334455443
Q ss_pred -CCcEEEEccee-------------cC--------CCccccccHHHHHHHHHHHHcCCCCeEEcCCCccc
Q psy1547 158 -EENVVFSGDTI-------------LG--------EGTTVFSDLISYIESLRRIRSLKPDIIYPAHGPVV 205 (216)
Q Consensus 158 -~~~vl~~GD~~-------------~~--------~~~~~~~~~~~~~~~l~~l~~~~~~~v~pgHg~~~ 205 (216)
++-++++|..= ++ +....-++.++..++++.+++++++.++|+|..-.
T Consensus 171 ~~GlvvitGCsH~GI~Niv~~a~~~~g~~i~~viGGfHL~~~~~~~l~~tl~~l~~~~~~~i~~~HCTg~ 240 (267)
T 3h3e_A 171 KEGLVVITGCSHRGIDNILLDIAETFNERIKMVVGGFHLLKSSDDEIEKIVKAFNELGVETVVPCHCTGE 240 (267)
T ss_dssp TTEEEEEESCCTTCHHHHHHHHHTTCSSCEEEEEEECCCTTSCHHHHHHHHHHHHHTTCCEEEEETTSCH
T ss_pred CCcEEEEeCCCCcCHHHHHHHHHHHhCCCceEEEeccccCCCCHHHHHHHHHHHHhcCCCEEEEECCCCH
Confidence 34488899740 11 11122256788889999999999999999997654
No 71
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.18 E-value=1.3e-11 Score=99.18 Aligned_cols=91 Identities=20% Similarity=0.307 Sum_probs=65.9
Q ss_pred CccEEEecccCccccCChHHHHhhcCCCcceEeccCCCCcccccccCCCCCCCceeecCCCCeEEE-------CCeeEEE
Q psy1547 69 SLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKV-------EGATLRV 141 (216)
Q Consensus 69 ~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~i~~ 141 (216)
+|++||+||.|.||+||+.++. .+++|+++.+........... ......++.++.+.+ |+.++++
T Consensus 24 ~i~ai~lTH~H~DHiggl~~l~------~~pVy~s~~t~~ll~~~l~~~--~~~~~~~~~~~~~~i~~~~~~~g~~~v~~ 95 (336)
T 3zdk_A 24 TARLFFLSHMHSDHTVGLSSTW------ARPLYCSPITAHLLHRHLQVS--KQWIQALEVGESHVLPLDEIGQETMTVTL 95 (336)
T ss_dssp SSCEEECCCCCGGGSTTCSTTC------CSCEEECHHHHHHHHHHHCCC--TTTEEECCTTSEEEEESSSSSSCEEEEEE
T ss_pred CCCEEEECCChHHHHCchHHHc------CCCEEecHHHHHHHHHhhhhc--ccceEecCCCCeEEecCcccccCCEEEEE
Confidence 6999999999999999999863 268888765543322111110 123455666665544 7889999
Q ss_pred EeCCCCCCCceEEEEC--CCcEEEEccee
Q psy1547 142 IHTPGHTTDHIVLKLE--EENVVFSGDTI 168 (216)
Q Consensus 142 ~~~pgHt~~~~~~~~~--~~~vl~~GD~~ 168 (216)
+++ ||.+|++++.++ +++++|+||+-
T Consensus 96 ~~~-~H~~gs~~~~i~~~~~~i~~tGD~~ 123 (336)
T 3zdk_A 96 LDA-NHCPGSVMFLFEGYFGTILYTGDFR 123 (336)
T ss_dssp EEC-SSSTTCEEEEEEETTEEEEECCSCC
T ss_pred EEC-CCCcceEEEEEEeCCceEEEeCCCC
Confidence 996 799999999985 57899999974
No 72
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=62.24 E-value=38 Score=25.66 Aligned_cols=14 Identities=0% Similarity=0.180 Sum_probs=10.3
Q ss_pred CCccccccceEEec
Q psy1547 6 PNVSQLSSRVIRVL 19 (216)
Q Consensus 6 ~~~~~v~~~v~~v~ 19 (216)
.++.+|.+|+|.+.
T Consensus 121 ~~~~eI~pgv~~~g 134 (267)
T 3h3e_A 121 ERITEIGKNMFLLG 134 (267)
T ss_dssp SSEEEEETTEEEEC
T ss_pred CCCeEEcCCcEEeC
Confidence 34567889998884
No 73
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=45.08 E-value=21 Score=27.73 Aligned_cols=46 Identities=15% Similarity=0.106 Sum_probs=26.8
Q ss_pred CcEEEEcceecCCCccccccHHHHHHHHHHHHcCCCC--eEEcCCCccc
Q psy1547 159 ENVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPD--IIYPAHGPVV 205 (216)
Q Consensus 159 ~~vl~~GD~~~~~~~~~~~~~~~~~~~l~~l~~~~~~--~v~pgHg~~~ 205 (216)
+-++++||++-. ..+.......+.+.++++.+.+.. .+...|+...
T Consensus 42 D~vl~~GDl~d~-~~~~~~~~~~~~~~l~~l~~~~~~v~~v~GNHD~~~ 89 (333)
T 1ii7_A 42 DFILIAGDLFHS-SRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQ 89 (333)
T ss_dssp SEEEEESCSBSS-SSCCHHHHHHHHHHHHHHHTTTCCEEEECCTTTCCS
T ss_pred CEEEECCCcCCC-CCCCHHHHHHHHHHHHHHHHCCCcEEEeCCcCCCcc
Confidence 468899996433 222223345556677777765544 4445588754
No 74
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=30.51 E-value=54 Score=25.71 Aligned_cols=41 Identities=15% Similarity=0.002 Sum_probs=24.0
Q ss_pred CCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCc
Q psy1547 39 GSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHN 80 (216)
Q Consensus 39 ~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~ 80 (216)
++.+++||-.-.... .+....+.+.+.|..-.++++||.=.
T Consensus 213 gk~viIVDDii~TG~-Tl~~a~~~L~~~Ga~~v~~~~tH~v~ 253 (326)
T 3s5j_B 213 DRVAILVDDMADTCG-TICHAADKLLSAGATRVYAILTHGIF 253 (326)
T ss_dssp TSEEEEEEEEESSCH-HHHHHHHHHHHTTCSEEEEEEEEECC
T ss_pred CCEEEEEccccCCcH-HHHHHHHHHHHcCCCEEEEEEEeccc
Confidence 334555554332212 24556667777777667889999643
No 75
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=30.17 E-value=48 Score=25.84 Aligned_cols=41 Identities=12% Similarity=-0.062 Sum_probs=25.3
Q ss_pred CceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCcc
Q psy1547 40 SRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHND 81 (216)
Q Consensus 40 ~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~D 81 (216)
+.++|||-.-.... .+....+.+.+.|..-.++++||.=.+
T Consensus 218 k~VlLVDDiitTG~-Tl~~aa~~Lk~~Ga~~V~~~~tH~v~~ 258 (317)
T 1dku_A 218 KTAILIDDIIDTAG-TITLAANALVENGAKEVYACCTHPVLS 258 (317)
T ss_dssp CEEEEECSEESSCH-HHHHHHHHHHHTTCSEEEEECSEECCC
T ss_pred CEEEEEecccCCCH-HHHHHHHHHHHcCCcEEEEEEECcccC
Confidence 44555555433222 245566667777776778999997654
No 76
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=30.11 E-value=54 Score=25.63 Aligned_cols=40 Identities=15% Similarity=0.076 Sum_probs=24.2
Q ss_pred CCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccC
Q psy1547 39 GSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWH 79 (216)
Q Consensus 39 ~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H 79 (216)
++.+++||-.-.... .+....+.+.+.|....++++||.=
T Consensus 216 gk~viiVDDii~TG~-Tl~~a~~~L~~~Ga~~v~~~~tH~v 255 (319)
T 3dah_A 216 GRTCVIMDDMVDTAG-TLCKAAQVLKERGAKQVFAYATHPV 255 (319)
T ss_dssp CSEEEEEEEEESSCH-HHHHHHHHHHHTTCSCEEEEEEEEC
T ss_pred CCEEEEEecccCchH-HHHHHHHHHHHcCCCEEEEEEEeec
Confidence 344555554333212 2455666777777766799999974
No 77
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=30.00 E-value=57 Score=25.02 Aligned_cols=32 Identities=19% Similarity=0.174 Sum_probs=22.6
Q ss_pred EEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCc
Q psy1547 44 LLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHN 80 (216)
Q Consensus 44 liD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~ 80 (216)
++|+|.. +....+.+.+.|....++++||.=.
T Consensus 212 ii~TG~T-----l~~a~~~L~~~Ga~~v~~~~th~v~ 243 (286)
T 3lrt_A 212 IISTGGT-----IAKSSGLLREKGASKIYVSAVHGLF 243 (286)
T ss_dssp EESSCHH-----HHHHHHHHHHTTCSEEEEEEEEECC
T ss_pred cccccHH-----HHHHHHHHHhCCCCEEEEEEEEeec
Confidence 5566643 4566677777777788999999753
No 78
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=28.79 E-value=60 Score=26.05 Aligned_cols=24 Identities=8% Similarity=0.034 Sum_probs=17.1
Q ss_pred HHHHHHHHhhCCCCccEEEecccC
Q psy1547 56 IENLKQVLNKESISLEHIVLSHWH 79 (216)
Q Consensus 56 ~~~~~~~l~~~~~~i~~v~~TH~H 79 (216)
+....+.+.+.|....++++||.=
T Consensus 288 l~~a~~~L~~~Ga~~v~~~~tH~v 311 (379)
T 2ji4_A 288 FLAAAETLKERGAYKIFVMATHGL 311 (379)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEEEEeec
Confidence 455566677777766788999964
No 79
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=27.97 E-value=82 Score=22.19 Aligned_cols=42 Identities=10% Similarity=0.209 Sum_probs=24.8
Q ss_pred CcEEEEcceecCCCccccccHHHHHHHHHHHHcCCCC-eEEcC-CCccc
Q psy1547 159 ENVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPD-IIYPA-HGPVV 205 (216)
Q Consensus 159 ~~vl~~GD~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-~v~pg-Hg~~~ 205 (216)
+-++++||++... ...+++.+.++.+.+++.. .+++| |+...
T Consensus 34 D~vi~~GDl~~~~-----~~~~~~~~~~~~l~~~~~pv~~v~GNHD~~~ 77 (228)
T 1uf3_A 34 DAIALIGNLMPKA-----AKSRDYAAFFRILSEAHLPTAYVPGPQDAPI 77 (228)
T ss_dssp SEEEEESCSSCTT-----CCHHHHHHHHHHHGGGCSCEEEECCTTSCSH
T ss_pred CEEEECCCCCCCC-----CCHHHHHHHHHHHHhcCCcEEEECCCCCchh
Confidence 4688899964321 1345566677777766544 44444 76543
No 80
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=27.90 E-value=41 Score=26.81 Aligned_cols=46 Identities=15% Similarity=0.200 Sum_probs=25.3
Q ss_pred CcEEEEcceecCCCccccccHHHHHHHHHHHHcCCCC-eEEc-CCCccc
Q psy1547 159 ENVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPD-IIYP-AHGPVV 205 (216)
Q Consensus 159 ~~vl~~GD~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-~v~p-gHg~~~ 205 (216)
+-++++||+ +....+.......+.+.++++.+.+.. .+++ .|+...
T Consensus 62 D~VliaGDl-~d~~~p~~~~~~~~~~~l~~L~~~~~pv~~v~GNHD~~~ 109 (386)
T 3av0_A 62 DVVLHSGDL-FNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPR 109 (386)
T ss_dssp SEEEECSCS-BSSSSCCHHHHHHHHHHHHHHHHTTCEEEECCCGGGSCS
T ss_pred CEEEECCCC-CCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEcCCCCCCc
Confidence 458899995 433333222334456667777654444 4444 477654
No 81
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=25.11 E-value=57 Score=24.90 Aligned_cols=41 Identities=7% Similarity=-0.063 Sum_probs=24.7
Q ss_pred CCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCc
Q psy1547 39 GSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHN 80 (216)
Q Consensus 39 ~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~ 80 (216)
++.+++||-.-.... .+....+.+.+.|....++++||.=.
T Consensus 205 Gk~VlIVDDii~TG~-Tl~~aa~~Lk~~Ga~~V~~~~~h~v~ 245 (284)
T 1u9y_A 205 DRDVFIVDDIISTGG-TMATAVKLLKEQGAKKIIAACVHPVL 245 (284)
T ss_dssp TCCEEEEEEECSSSH-HHHHHHHHHHHTTCCSEEEEEEECCC
T ss_pred CCEEEEEecccCchH-HHHHHHHHHHHCCCcEEEEEEEeEec
Confidence 344556555433222 34556667777677667889999754
No 82
>3i0p_A Malate dehydrogenase; araerobic parasitic protozoan, amoebic dysentery, ssgcid, NI infectious disease, structural genomics; HET: NAD; 2.60A {Entamoeba histolytica}
Probab=24.50 E-value=1.7e+02 Score=23.30 Aligned_cols=56 Identities=14% Similarity=-0.003 Sum_probs=38.7
Q ss_pred EEEEecCCceEEEecCCCCChh----HHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhh
Q psy1547 33 TYILGTGSRRLLLDTGEPDHME----YIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEH 92 (216)
Q Consensus 33 ~~li~~~~~~iliD~g~~~~~~----~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~ 92 (216)
.-++.....+++||.......- ..+...+..++.| |-.|.+.|+| |+|-+.++...
T Consensus 74 p~v~~~~~a~~~vDg~~g~G~~~~~~am~~aiekAk~~G--ig~v~vrns~--H~G~~g~y~~~ 133 (365)
T 3i0p_A 74 PSIIRETSTTCVLDGNNGFGHVNGTIGMKMAIEKAKKYG--MGMVVVRNST--HFGIAGYYSLL 133 (365)
T ss_dssp CEEEEECSSEEEEECTTCCHHHHHHHHHHHHHHHHHHHS--EEEEEEEEEC--CCSCHHHHHHH
T ss_pred cEEEeecCcEEEEECCCCchHHHHHHHHHHHHHHHHHhC--EEEEEEecCC--CcchhHHHHHH
Confidence 4456777889999998776432 2344444444444 7788888876 99999988776
No 83
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=23.63 E-value=52 Score=25.46 Aligned_cols=47 Identities=13% Similarity=0.193 Sum_probs=20.0
Q ss_pred CcEEEEcceecCCCccccccHHHHHHHHHHHHcC-CCCeEEcCCCccc
Q psy1547 159 ENVVFSGDTILGEGTTVFSDLISYIESLRRIRSL-KPDIIYPAHGPVV 205 (216)
Q Consensus 159 ~~vl~~GD~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~v~pgHg~~~ 205 (216)
+-++++||.++....+.......+.+.++++.+. +.-.+...|+...
T Consensus 63 D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~~~pv~~i~GNHD~~~ 110 (336)
T 2q8u_A 63 DLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAPVVVLPGNHDWKG 110 (336)
T ss_dssp SEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHHSCEEECCC------
T ss_pred CEEEECCccccCCCCCCHHHHHHHHHHHHHHHhcCCEEEECCCCCccc
Confidence 4588999933432222222233455666666543 2224444476544
No 84
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=22.65 E-value=53 Score=24.39 Aligned_cols=44 Identities=27% Similarity=0.334 Sum_probs=25.5
Q ss_pred ecCCCCChhHHHHHHHHHhhCCCCccEEEecc----cCccccCChHHHHhh
Q psy1547 46 DTGEPDHMEYIENLKQVLNKESISLEHIVLSH----WHNDHVGGLKDIFEH 92 (216)
Q Consensus 46 D~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH----~H~DH~gg~~~~~~~ 92 (216)
|.+.....+..+.+.+.+.+.. .+ +++|| .|+||.........+
T Consensus 76 D~~~~~~~~~~~~l~~~ir~~~--Pd-vV~t~~~~d~H~DH~~~~~~v~~A 123 (242)
T 2ixd_A 76 DRGLYMKEEYIREIVKVIRTYK--PK-LVFAPYYEDRHPDHANCAKLVEEA 123 (242)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHC--CS-EEEEECSCSSSHHHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHHHHHcC--CC-EEEECCCCCCChhHHHHHHHHHHH
Confidence 4444444555666666666432 34 34577 689998766555444
No 85
>1z2i_A Malate dehydrogenase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; HET: NAD; 2.20A {Agrobacterium tumefaciens}
Probab=22.47 E-value=2e+02 Score=22.85 Aligned_cols=56 Identities=11% Similarity=0.039 Sum_probs=38.6
Q ss_pred EEEEecCCceEEEecCCCCChh----HHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhh
Q psy1547 33 TYILGTGSRRLLLDTGEPDHME----YIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEH 92 (216)
Q Consensus 33 ~~li~~~~~~iliD~g~~~~~~----~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~ 92 (216)
.-++.....+++||.......- ..+...+..++.| |-.|.+.++| |+|-+.++..+
T Consensus 76 p~v~~~~~a~~~vDg~~g~G~~~~~~am~~aiekAk~~G--i~~v~vrns~--H~G~~g~y~~~ 135 (358)
T 1z2i_A 76 ISRVSGFGAVETIDADHAHGARATYAAMENAMALAEKFG--IGAVAIRNSS--HFGPAGAYALE 135 (358)
T ss_dssp CEEEECCTTEEEEECSSCCHHHHHHHHHHHHHHHHHHHS--EEEEEEEEEC--CCSCTHHHHHH
T ss_pred eEEEEcCCcEEEEECCCCcHHHHHHHHHHHHHHHHHHcC--EEEEEEeCCC--CcchHHHHHHH
Confidence 4456777789999998776432 2344444444444 7788888876 99999988776
No 86
>2x06_A L-sulfolactate dehydrogenase; oxidoreductase, hyperthermostable, coenzyme M, methanogens, coenzyme M biosynthesis; HET: NAD; 2.50A {Methanocaldococcus jannaschii}
Probab=22.29 E-value=1.9e+02 Score=22.74 Aligned_cols=57 Identities=11% Similarity=-0.041 Sum_probs=38.6
Q ss_pred EEEEecCCceEEEecCCCCChh----HHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhc
Q psy1547 33 TYILGTGSRRLLLDTGEPDHME----YIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHI 93 (216)
Q Consensus 33 ~~li~~~~~~iliD~g~~~~~~----~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~ 93 (216)
.-++.....+++||...+...- ..+...+..++.| |-.|.+.++| |+|-+.++....
T Consensus 67 ~~i~~~~~a~~~vDg~~g~G~~~~~~a~~~ai~~Ak~~G--i~~v~v~ns~--H~G~~g~y~~~a 127 (344)
T 2x06_A 67 IKIVKESPATAVIDGDLGLGQVVGKKAMELAIKKAKNVG--VGVVATRNAN--HFGIAGYYSELA 127 (344)
T ss_dssp CEEEEECSSEEEEECTTBCHHHHHHHHHHHHHHHHHHHS--EEEEEEESCC--CCSCTHHHHHHH
T ss_pred eEEEeccCcEEEEECCCCccHHHHHHHHHHHHHHHHhcC--eEEEEeccCc--cccchHHHHHHH
Confidence 4456667789999998765332 2344444444444 7778888866 999999887764
No 87
>1nxu_A Hypothetical oxidoreductase YIAK; hypothetical protein, structural genomics, PSI, protein structure initiative; 1.80A {Escherichia coli} SCOP: c.122.1.1 PDB: 1s20_A*
Probab=21.95 E-value=1.7e+02 Score=22.92 Aligned_cols=56 Identities=5% Similarity=-0.130 Sum_probs=38.1
Q ss_pred EEEEecCCceEEEecCCCCChh----HHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhh
Q psy1547 33 TYILGTGSRRLLLDTGEPDHME----YIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEH 92 (216)
Q Consensus 33 ~~li~~~~~~iliD~g~~~~~~----~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~ 92 (216)
.-++......++||.......- ..+...+..++.| |-.|.+.|+| |+|-+.++..+
T Consensus 67 p~v~~~~~a~~~vDg~~g~G~~~~~~am~~aiekAk~~G--i~~v~vrns~--H~G~~g~y~~~ 126 (333)
T 1nxu_A 67 PKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAADHG--IGLVALRNAN--HWMRGGSYGWQ 126 (333)
T ss_dssp CEEEEEETTEEEEECTTCCHHHHHHHHHHHHHHHHHHHS--EEEEEEEEEC--CCSCTHHHHHH
T ss_pred cEEEEcCCcEEEEECCCCcHHHHHHHHHHHHHHHHHHcC--EEEEEEeCCC--CCCccHHHHHH
Confidence 3456667779999998776432 2344444444444 7788888877 89999977665
No 88
>4h8a_A Ureidoglycolate dehydrogenase; rossmann fold, oxidoreductase; HET: NAI; 1.64A {Escherichia coli} PDB: 4fju_A* 4fjs_A* 1xrh_A
Probab=21.14 E-value=1.9e+02 Score=22.79 Aligned_cols=56 Identities=13% Similarity=0.171 Sum_probs=38.1
Q ss_pred EEEEecCCceEEEecCCCCChh----HHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhh
Q psy1547 33 TYILGTGSRRLLLDTGEPDHME----YIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEH 92 (216)
Q Consensus 33 ~~li~~~~~~iliD~g~~~~~~----~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~ 92 (216)
.-++.....+.+||.......- ..+...+..++.| |-.|.+.++| |+|-+.++...
T Consensus 69 p~v~~~~~a~~~vDg~~g~G~~~~~~am~~aiekAk~~G--ig~v~vrns~--H~G~~g~y~~~ 128 (339)
T 4h8a_A 69 FRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNG--VAVVGISRMG--HSGAISYFVQQ 128 (339)
T ss_dssp CEEEEEETTEEEEECTTCCHHHHHHHHHHHHHHHHHHHS--EEEEEEEEEC--CCCCTHHHHHH
T ss_pred eEEEEccCcEEEEECCCCchHHHHHHHHHHHHHHHHHhC--EEEEEEecCC--CcchhHHHHHH
Confidence 3456667779999998776432 2344444444444 7778888877 99999988776
No 89
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=20.81 E-value=23 Score=27.24 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHcCCCCeEEcCCCccccCccccc
Q psy1547 179 LISYIESLRRIRSLKPDIIYPAHGPVVEVGLSFS 212 (216)
Q Consensus 179 ~~~~~~~l~~l~~~~~~~v~pgHg~~~~~~~~~~ 212 (216)
++...+..+...+.++|+++..||.+++.++..+
T Consensus 211 ~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~ 244 (286)
T 2p10_A 211 VSLINECIEAARTIRDDIIILSHGGPIANPEDAR 244 (286)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHH
Confidence 4455566677788899999999997777765543
Done!