BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15472
(247 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|380016777|ref|XP_003692349.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1-like [Apis
florea]
Length = 1621
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/125 (72%), Positives = 104/125 (83%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S RCFFDKELY TGHGGHCLDC+ +RDG NCE+CR+N+YQ+ DN+C ACNCN
Sbjct: 344 CNCNGYSERCFFDKELYKLTGHGGHCLDCRANRDGANCERCRENFYQRPEDNYCVACNCN 403
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS +LQCNSEG+CQCKPGVTGDKCD C N+Y+FG GC SCECN AGS+ NTPNCD
Sbjct: 404 EIGSRSLQCNSEGKCQCKPGVTGDKCDHCAANYYNFGSYGCNSCECNTAGSLTNTPNCDP 463
Query: 121 VKGQC 125
+ G C
Sbjct: 464 ISGVC 468
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 61/75 (81%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNSEG+CQCKPGVTGDKCD C N+Y+FG GC SCECN AGS+ NTPNCD +
Sbjct: 406 GSRSLQCNSEGKCQCKPGVTGDKCDHCAANYYNFGSYGCNSCECNTAGSLTNTPNCDPIS 465
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 466 GVCTCKENVEGKRCR 480
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 105/246 (42%), Gaps = 51/246 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNL--QCNSE-GRC-QCKPG 80
C +C R GP CE C D Y+ C C+CN LN CN E G C +C
Sbjct: 798 CSECPLGRTGPRCETCSDGYFGNPEKGIACRPCDCNNNIDLNAVRNCNHETGECLKCVNN 857
Query: 81 VTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVK----NTPNCDSVKGQCESAQLS 131
G C+ C +Y D E GCK C+C P G+++ C+ + G C + +
Sbjct: 858 TAGFHCEECLSGYYGDALSDRKEDGCKLCQCYPPGTIELNDGRVAPCEQLTGHC-TCKSH 916
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS 180
GR N D +C+ Y + G GS N CN
Sbjct: 917 VIGR-----------NCD----------KCEEGYYHILSGEGCTPCNCDTEGSYNRTCNP 955
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C+C+PG+TG CD C Y F GCK C+C+ GS CD+ GQC C N
Sbjct: 956 VTGQCECRPGITGQHCDACVPYQYGFSREGCKPCDCDSIGS--QDLQCDA-SGQCLCLPN 1012
Query: 240 VEGAQC 245
VEG +C
Sbjct: 1013 VEGRRC 1018
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 77/191 (40%), Gaps = 65/191 (34%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ G NC+KC + YY CT CNC+ GS N CN G+C+C+PG+T
Sbjct: 909 GHCT-CKSHVIGRNCDKCEEGYYHILSGEGCTPCNCDTEGSYNRTCNPVTGQCECRPGIT 967
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD C Y F GCK C+ CDS+
Sbjct: 968 GQHCDACVPYQYGFSREGCKPCD------------CDSI--------------------- 994
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
GS +LQC++ G+C C P V G +CDRC N
Sbjct: 995 -----------------------------GSQDLQCDASGQCLCLPNVEGRRCDRCKENK 1025
Query: 203 YDFGEAGCKSC 213
++ + GC C
Sbjct: 1026 HN-RQNGCVDC 1035
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YNRT G C +C+ G +C+ C Y S + C C+C+ IGS +LQC++ G+
Sbjct: 949 YNRTCNPVTGQC-ECRPGITGQHCDACVPYQYGFSREG-CKPCDCDSIGSQDLQCDASGQ 1006
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
C C P V G +CDRC N ++ + GC C
Sbjct: 1007 CLCLPNVEGRRCDRCKENKHN-RQNGCVDC 1035
>gi|383858273|ref|XP_003704626.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1-like
[Megachile rotundata]
Length = 1652
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/125 (71%), Positives = 105/125 (84%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S+RC+FDKELY TGHGGHCLDC+ +RDG NCE+CR+NYYQ+ D++C ACNCN
Sbjct: 346 CNCNGYSDRCYFDKELYKATGHGGHCLDCRANRDGANCERCRENYYQRPEDSYCVACNCN 405
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS NLQCNSEG+CQCKPGVTGDKCDRC N+++FG GC CECN AGS+ NTPNCD
Sbjct: 406 EIGSRNLQCNSEGKCQCKPGVTGDKCDRCAANYFNFGSYGCTPCECNVAGSLTNTPNCDP 465
Query: 121 VKGQC 125
+ G C
Sbjct: 466 ISGIC 470
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 61/75 (81%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS NLQCNSEG+CQCKPGVTGDKCDRC N+++FG GC CECN AGS+ NTPNCD +
Sbjct: 408 GSRNLQCNSEGKCQCKPGVTGDKCDRCAANYFNFGSYGCTPCECNVAGSLTNTPNCDPIS 467
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 468 GICICKENVEGKRCR 482
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 106/246 (43%), Gaps = 51/246 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNL--QCNSE-GRC-QCKPG 80
C +C R GP CE C D Y+ + C C+CN LN CN E G C +C
Sbjct: 800 CSECPSGRTGPRCETCSDGYFGNPEEGIACRPCDCNNNIDLNAVRNCNHETGECLKCVNN 859
Query: 81 VTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVK----NTPNCDSVKGQCESAQLS 131
G C+ C +Y D E GCK C+C P G+V+ C+ + G C + +
Sbjct: 860 TAGFHCEECLPGYYGDALSDRKEDGCKLCQCYPPGTVELDDGRVAPCEQLTGHC-TCKPH 918
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS 180
GR N D +C+ Y + G GS N CN
Sbjct: 919 VTGR-----------NCD----------KCEDGYYHILSGEGCTPCNCDSEGSYNRTCNP 957
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C+C+PGVTG CD C Y F GCK C+C+ GS CD+ GQC C N
Sbjct: 958 VTGQCECRPGVTGQHCDACVPYQYGFSREGCKPCDCDSIGS--QDLQCDA-SGQCPCLPN 1014
Query: 240 VEGAQC 245
VEG +C
Sbjct: 1015 VEGRRC 1020
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 77/191 (40%), Gaps = 65/191 (34%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ G NC+KC D YY CT CNC+ GS N CN G+C+C+PGVT
Sbjct: 911 GHCT-CKPHVTGRNCDKCEDGYYHILSGEGCTPCNCDSEGSYNRTCNPVTGQCECRPGVT 969
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD C Y F GCK C +CDS+
Sbjct: 970 GQHCDACVPYQYGFSREGCKPC------------DCDSI--------------------- 996
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
GS +LQC++ G+C C P V G +CDRC N
Sbjct: 997 -----------------------------GSQDLQCDASGQCPCLPNVEGRRCDRCKENK 1027
Query: 203 YDFGEAGCKSC 213
++ + GC C
Sbjct: 1028 HN-RQNGCVDC 1037
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YNRT G C +C+ G +C+ C Y S + C C+C+ IGS +LQC++ G+
Sbjct: 951 YNRTCNPVTGQC-ECRPGVTGQHCDACVPYQYGFSREG-CKPCDCDSIGSQDLQCDASGQ 1008
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
C C P V G +CDRC N ++ + GC C
Sbjct: 1009 CPCLPNVEGRRCDRCKENKHN-RQNGCVDC 1037
>gi|328776171|ref|XP_003249128.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1 [Apis
mellifera]
Length = 1611
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/125 (71%), Positives = 103/125 (82%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S RCFFDKELY TGHGGHCLDC+ +RDG NCE+CR+N+YQ+ DN+C ACNCN
Sbjct: 308 CNCNGYSERCFFDKELYKVTGHGGHCLDCRANRDGANCERCRENFYQRPEDNYCVACNCN 367
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS +LQCNSEG+CQCKPGVTGDKCD C N+Y+FG GC SCECN AGS+ N PNCD
Sbjct: 368 EIGSRSLQCNSEGKCQCKPGVTGDKCDHCAANYYNFGSYGCSSCECNAAGSLTNIPNCDP 427
Query: 121 VKGQC 125
+ G C
Sbjct: 428 ISGIC 432
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNSEG+CQCKPGVTGDKCD C N+Y+FG GC SCECN AGS+ N PNCD +
Sbjct: 370 GSRSLQCNSEGKCQCKPGVTGDKCDHCAANYYNFGSYGCSSCECNAAGSLTNIPNCDPIS 429
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 430 GICTCKENVEGKRCR 444
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 106/246 (43%), Gaps = 51/246 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNL--QCNSE-GRC-QCKPG 80
C +C R GP CE C D Y+ D C C+CN LN CN E G C +C
Sbjct: 762 CSECPLGRTGPRCETCSDGYFGNPEKDIACRPCDCNNNIDLNAVRNCNHETGECLKCVNN 821
Query: 81 VTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVK----NTPNCDSVKGQCESAQLS 131
G C+ C +Y D E GCK C+C P G+V+ C+ + G C + +
Sbjct: 822 TAGFHCEECLPGYYGDALSDRKEDGCKLCQCYPPGTVELNDGRVAPCEQLTGHC-TCKSH 880
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS 180
GR N D +C+ Y + G GS N CN
Sbjct: 881 VIGR-----------NCD----------KCEEGYYHILSGEGCTPCNCDAEGSYNRTCNP 919
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C+C+PG+TG CD C Y F GCK C+C+ GS CD+ GQC C N
Sbjct: 920 VTGQCECRPGITGQHCDACVPYQYGFSREGCKPCDCDSIGS--QDLQCDA-NGQCPCLPN 976
Query: 240 VEGAQC 245
VEG +C
Sbjct: 977 VEGRRC 982
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 77/191 (40%), Gaps = 65/191 (34%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ G NC+KC + YY CT CNC+ GS N CN G+C+C+PG+T
Sbjct: 873 GHCT-CKSHVIGRNCDKCEEGYYHILSGEGCTPCNCDAEGSYNRTCNPVTGQCECRPGIT 931
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD C Y F GCK C+ CDS+
Sbjct: 932 GQHCDACVPYQYGFSREGCKPCD------------CDSI--------------------- 958
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
GS +LQC++ G+C C P V G +CDRC N
Sbjct: 959 -----------------------------GSQDLQCDANGQCPCLPNVEGRRCDRCKENK 989
Query: 203 YDFGEAGCKSC 213
++ + GC C
Sbjct: 990 HN-RQNGCVDC 999
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 111/261 (42%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
CNCN ++ C G C+ C+ + G NCE C+ YY K + C C
Sbjct: 694 CNCNNHADIC---------EAETGQCI-CEHNTAGSNCELCKRGYYGHPLKGTPDDCKPC 743
Query: 58 NCNPIGS-LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVK 113
C G + L N + C +C G TG +C+ C ++ E C+ C+CN +
Sbjct: 744 PCPDNGPCILLGNNPDPICSECPLGRTGPRCETCSDGYFGNPEKDIACRPCDCNNNIDLN 803
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR--CKR-DTYPLG- 169
NC+ G+C ++ G H E + G+ + D + CK YP G
Sbjct: 804 AVRNCNHETGECLKCVNNTAG-FHCEECLPGY-----YGDALSDRKEDGCKLCQCYPPGT 857
Query: 170 ---HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNT 224
+ G + G C CK V G CD+C+ +Y GE GC C C+ GS T
Sbjct: 858 VELNDGRVAPCEQLTGHCTCKSHVIGRNCDKCEEGYYHILSGE-GCTPCNCDAEGSYNRT 916
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
C+ V GQCEC+ + G C
Sbjct: 917 --CNPVTGQCECRPGITGQHC 935
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YNRT G C +C+ G +C+ C Y S + C C+C+ IGS +LQC++ G+
Sbjct: 913 YNRTCNPVTGQC-ECRPGITGQHCDACVPYQYGFSREG-CKPCDCDSIGSQDLQCDANGQ 970
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
C C P V G +CDRC N ++ + GC C
Sbjct: 971 CPCLPNVEGRRCDRCKENKHN-RQNGCVDC 999
>gi|322798888|gb|EFZ20399.1| hypothetical protein SINV_07587 [Solenopsis invicta]
Length = 1523
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 89/125 (71%), Positives = 103/125 (82%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S+RC+FDKELY +GHGGHCLDC+ +RDG NCE+CR+NYYQ+ DN+C ACNCN
Sbjct: 246 CNCNGYSDRCYFDKELYKTSGHGGHCLDCRANRDGANCERCRENYYQRPEDNYCIACNCN 305
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS +LQCNSEG+CQCKPGVTGDKCDRC N Y+FG GC SCECN AGS N PNCD
Sbjct: 306 EIGSRSLQCNSEGKCQCKPGVTGDKCDRCAANFYNFGSQGCTSCECNLAGSADNVPNCDP 365
Query: 121 VKGQC 125
+ G C
Sbjct: 366 ITGVC 370
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 59/75 (78%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNSEG+CQCKPGVTGDKCDRC N Y+FG GC SCECN AGS N PNCD +
Sbjct: 308 GSRSLQCNSEGKCQCKPGVTGDKCDRCAANFYNFGSQGCTSCECNLAGSADNVPNCDPIT 367
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 368 GVCACKENVEGKRCR 382
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 106/246 (43%), Gaps = 51/246 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNL--QCNSE-GRC-QCKPG 80
C +C R GP CE C D YY C +C+CN LN CN E G C +C
Sbjct: 700 CSECPIGRTGPRCETCSDGYYGNPERGLACRSCDCNNNIDLNAVRNCNHETGECLKCVNN 759
Query: 81 VTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVK----NTPNCDSVKGQCESAQLS 131
G C+ C +Y D E GCK C+C P G+++ CD + G C + +
Sbjct: 760 TAGFHCEECLAGYYGDALSDRKEDGCKLCQCYPPGTLELDDGRVAPCDQLTGHC-ACKPH 818
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS 180
GR N D +C+ Y + G GS N C+
Sbjct: 819 VIGR-----------NCD----------KCEEGYYHIMSGEGCTPCNCDLEGSYNRTCDP 857
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+CQC+ GVTG CD C+ Y F GCK C+C+ GS CD+ GQC C N
Sbjct: 858 ITGQCQCRLGVTGQHCDACEPYQYGFSREGCKPCDCDSIGS--QDLQCDA-NGQCLCLTN 914
Query: 240 VEGAQC 245
VEG +C
Sbjct: 915 VEGRRC 920
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ G NC+KC + YY CT CNC+ GS N C+ G+CQC+ GVT
Sbjct: 811 GHCA-CKPHVIGRNCDKCEEGYYHIMSGEGCTPCNCDLEGSYNRTCDPITGQCQCRLGVT 869
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD C+ Y F GCK C+C+ GS
Sbjct: 870 GQHCDACEPYQYGFSREGCKPCDCDSIGS 898
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 114/263 (43%), Gaps = 39/263 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
CNCNG ++ C G C+ CQ + G NCE C YY K + C C
Sbjct: 632 CNCNGHADIC---------EAETGQCI-CQHNTAGSNCELCSRGYYGYPLKGTPDDCKPC 681
Query: 58 NCNPIGS-LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVK 113
C G + L N + C +C G TG +C+ C +Y E G C+SC+CN +
Sbjct: 682 PCPDNGPCILLGNNPDPICSECPIGRTGPRCETCSDGYYGNPERGLACRSCDCNNNIDLN 741
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR--CKR-DTYPLGH 170
NC+ G+C ++ G H E + G+ + D + CK YP
Sbjct: 742 AVRNCNHETGECLKCVNNTAG-FHCEECLAGYY-----GDALSDRKEDGCKLCQCYP--- 792
Query: 171 GGSLNLQ------CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVK 222
G+L L C+ G C CKP V G CD+C+ +Y GC C C+ GS
Sbjct: 793 PGTLELDDGRVAPCDQLTGHCACKPHVIGRNCDKCEEGYYHIMSGEGCTPCNCDLEGSYN 852
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD + GQC+C+ V G C
Sbjct: 853 RT--CDPITGQCQCRLGVTGQHC 873
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YNRT G C C+ G +C+ C Y S + C C+C+ IGS +LQC++ G+
Sbjct: 851 YNRTCDPITGQC-QCRLGVTGQHCDACEPYQYGFSREG-CKPCDCDSIGSQDLQCDANGQ 908
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
C C V G +CDRC N ++ + GC C
Sbjct: 909 CLCLTNVEGRRCDRCKENKHN-RQHGCIDC 937
>gi|332017935|gb|EGI58584.1| Laminin subunit gamma-1 [Acromyrmex echinatior]
Length = 1497
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/125 (70%), Positives = 104/125 (83%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S+RC+FDKELY TGHGGHCLDC+ +RDG NCE+CR+NYYQ+ DN+C ACNCN
Sbjct: 242 CNCNGYSDRCYFDKELYKLTGHGGHCLDCRANRDGANCERCRENYYQRPEDNYCVACNCN 301
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS +LQCNSEG+CQCKPGVTGDKC+RC N Y+FG GC SCEC+ AGS N PNCD+
Sbjct: 302 EIGSRSLQCNSEGKCQCKPGVTGDKCNRCAANFYNFGSQGCTSCECSLAGSANNVPNCDT 361
Query: 121 VKGQC 125
+ G C
Sbjct: 362 ITGVC 366
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNSEG+CQCKPGVTGDKC+RC N Y+FG GC SCEC+ AGS N PNCD++
Sbjct: 304 GSRSLQCNSEGKCQCKPGVTGDKCNRCAANFYNFGSQGCTSCECSLAGSANNVPNCDTIT 363
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 364 GVCVCKENVEGKRCR 378
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 107/246 (43%), Gaps = 51/246 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNL--QCNSE-GRC-QCKPG 80
C +C R GP CE C D YY C +C+CN LN CN E G C +C
Sbjct: 696 CSECPIGRTGPRCETCSDGYYGNPEKGLACRSCDCNNNIDLNAVRNCNHETGECLKCVNN 755
Query: 81 VTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVK----NTPNCDSVKGQCESAQLS 131
G C+ C +Y D E GCK C+C P G+++ CD + G C + +
Sbjct: 756 TAGFHCEECLAGYYGDALSDRKEDGCKLCQCYPPGTLELDDGRVAPCDQLTGHC-ACKPH 814
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS 180
GR N D +C+ Y + G GS N C+
Sbjct: 815 VIGR-----------NCD----------KCEEGYYHIASGEGCIPCNCDLEGSYNRTCDP 853
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+CQC+ GVTG +CD C+ Y F GCK C+C+ GS CD+ GQC C N
Sbjct: 854 ITGQCQCRLGVTGQRCDACEPYQYGFSREGCKPCDCDSIGS--QDLQCDA-NGQCPCLTN 910
Query: 240 VEGAQC 245
VEG +C
Sbjct: 911 VEGRRC 916
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ G NC+KC + YY + C CNC+ GS N C+ G+CQC+ GVT
Sbjct: 807 GHCA-CKPHVIGRNCDKCEEGYYHIASGEGCIPCNCDLEGSYNRTCDPITGQCQCRLGVT 865
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G +CD C+ Y F GCK C+C+ GS
Sbjct: 866 GQRCDACEPYQYGFSREGCKPCDCDSIGS 894
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YNRT G C C+ G C+ C Y S + C C+C+ IGS +LQC++ G+
Sbjct: 847 YNRTCDPITGQC-QCRLGVTGQRCDACEPYQYGFSREG-CKPCDCDSIGSQDLQCDANGQ 904
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
C C V G +CDRC N ++ + GC C
Sbjct: 905 CPCLTNVEGRRCDRCKENKHN-RQHGCVDC 933
>gi|340716933|ref|XP_003396945.1| PREDICTED: laminin subunit gamma-1-like isoform 1 [Bombus
terrestris]
Length = 1335
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/125 (69%), Positives = 101/125 (80%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S RCFFDKELY +GHGGHCLDC+ +RDG NCE CR+N+YQ+ D++C ACNCN
Sbjct: 58 CNCNGYSERCFFDKELYKASGHGGHCLDCRANRDGANCEHCRENFYQRPEDSYCVACNCN 117
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS +LQCNSEG+CQCKPGVTGDKCDRC N+Y+FG GC SCECN AGS+ N P CD
Sbjct: 118 EIGSRSLQCNSEGKCQCKPGVTGDKCDRCAANYYNFGSYGCTSCECNAAGSLANAPTCDP 177
Query: 121 VKGQC 125
G C
Sbjct: 178 TNGVC 182
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 59/75 (78%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNSEG+CQCKPGVTGDKCDRC N+Y+FG GC SCECN AGS+ N P CD
Sbjct: 120 GSRSLQCNSEGKCQCKPGVTGDKCDRCAANYYNFGSYGCTSCECNAAGSLANAPTCDPTN 179
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 180 GVCICKENVEGKRCR 194
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 106/246 (43%), Gaps = 51/246 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNL--QCNSE-GRC-QCKPG 80
C +C R GP CE C D Y+ C C+CN LN CN E G C +C
Sbjct: 512 CSECPLGRTGPRCETCSDGYFGNPEKGIACRPCDCNNNIDLNAVRNCNHETGECLKCVNN 571
Query: 81 VTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVK----NTPNCDSVKGQCESAQLS 131
G C+ C +Y D E GCK C+C P G+V+ C+ + G C + +
Sbjct: 572 TAGFHCEECLSGYYGDALSDRKEDGCKLCQCFPPGTVELSDGRVAPCEQLTGHC-TCKPH 630
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS 180
GR N D +C+ Y + G GS N CN+
Sbjct: 631 VTGR-----------NCD----------KCEEGYYHILSGEGCTPCNCDAEGSYNRTCNA 669
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C+C+PG+TG CD C Y F GCK C+C+ GS CD+ GQC C N
Sbjct: 670 VTGQCECRPGITGQHCDACVSYQYGFSREGCKPCDCDNIGS--QDLQCDA-SGQCPCFPN 726
Query: 240 VEGAQC 245
VEG +C
Sbjct: 727 VEGRRC 732
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ G NC+KC + YY CT CNC+ GS N CN+ G+C+C+PG+T
Sbjct: 623 GHC-TCKPHVTGRNCDKCEEGYYHILSGEGCTPCNCDAEGSYNRTCNAVTGQCECRPGIT 681
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD C Y F GCK C+C+ GS
Sbjct: 682 GQHCDACVSYQYGFSREGCKPCDCDNIGS 710
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQ-------CNSE 72
G CL C + G +CE+C YY + ++ C C C P G++ L
Sbjct: 563 GECLKCVNNTAGFHCEECLSGYYGDALSDRKEDGCKLCQCFPPGTVELSDGRVAPCEQLT 622
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQ 129
G C CKP VTG CD+C+ +Y GE GC C C+ GS T C++V GQCE
Sbjct: 623 GHCTCKPHVTGRNCDKCEEGYYHILSGE-GCTPCNCDAEGSYNRT--CNAVTGQCECRPG 679
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG 189
++ + H + V + F G + C D GS +LQC++ G+C C P
Sbjct: 680 ITGQ---HCDACVSYQYGFSREG-----CKPCDCDNI-----GSQDLQCDASGQCPCFPN 726
Query: 190 VTGDKCDRCDVNHYD 204
V G +CDRC N ++
Sbjct: 727 VEGRRCDRCKENKHN 741
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YNRT G C +C+ G +C+ C Y S + C C+C+ IGS +LQC++ G+
Sbjct: 663 YNRTCNAVTGQC-ECRPGITGQHCDACVSYQYGFSREG-CKPCDCDNIGSQDLQCDASGQ 720
Query: 75 CQCKPGVTGDKCDRCDVNHYD 95
C C P V G +CDRC N ++
Sbjct: 721 CPCFPNVEGRRCDRCKENKHN 741
>gi|340716935|ref|XP_003396946.1| PREDICTED: laminin subunit gamma-1-like isoform 2 [Bombus
terrestris]
Length = 1620
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/125 (69%), Positives = 101/125 (80%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S RCFFDKELY +GHGGHCLDC+ +RDG NCE CR+N+YQ+ D++C ACNCN
Sbjct: 343 CNCNGYSERCFFDKELYKASGHGGHCLDCRANRDGANCEHCRENFYQRPEDSYCVACNCN 402
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS +LQCNSEG+CQCKPGVTGDKCDRC N+Y+FG GC SCECN AGS+ N P CD
Sbjct: 403 EIGSRSLQCNSEGKCQCKPGVTGDKCDRCAANYYNFGSYGCTSCECNAAGSLANAPTCDP 462
Query: 121 VKGQC 125
G C
Sbjct: 463 TNGVC 467
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 59/75 (78%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNSEG+CQCKPGVTGDKCDRC N+Y+FG GC SCECN AGS+ N P CD
Sbjct: 405 GSRSLQCNSEGKCQCKPGVTGDKCDRCAANYYNFGSYGCTSCECNAAGSLANAPTCDPTN 464
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 465 GVCICKENVEGKRCR 479
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 106/246 (43%), Gaps = 51/246 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNL--QCNSE-GRC-QCKPG 80
C +C R GP CE C D Y+ C C+CN LN CN E G C +C
Sbjct: 797 CSECPLGRTGPRCETCSDGYFGNPEKGIACRPCDCNNNIDLNAVRNCNHETGECLKCVNN 856
Query: 81 VTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVK----NTPNCDSVKGQCESAQLS 131
G C+ C +Y D E GCK C+C P G+V+ C+ + G C + +
Sbjct: 857 TAGFHCEECLSGYYGDALSDRKEDGCKLCQCFPPGTVELSDGRVAPCEQLTGHC-TCKPH 915
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS 180
GR N D +C+ Y + G GS N CN+
Sbjct: 916 VTGR-----------NCD----------KCEEGYYHILSGEGCTPCNCDAEGSYNRTCNA 954
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C+C+PG+TG CD C Y F GCK C+C+ GS CD+ GQC C N
Sbjct: 955 VTGQCECRPGITGQHCDACVSYQYGFSREGCKPCDCDNIGS--QDLQCDA-SGQCPCFPN 1011
Query: 240 VEGAQC 245
VEG +C
Sbjct: 1012 VEGRRC 1017
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ G NC+KC + YY CT CNC+ GS N CN+ G+C+C+PG+T
Sbjct: 908 GHCT-CKPHVTGRNCDKCEEGYYHILSGEGCTPCNCDAEGSYNRTCNAVTGQCECRPGIT 966
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD C Y F GCK C+C+ GS
Sbjct: 967 GQHCDACVSYQYGFSREGCKPCDCDNIGS 995
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQ-------CNSE 72
G CL C + G +CE+C YY + ++ C C C P G++ L
Sbjct: 848 GECLKCVNNTAGFHCEECLSGYYGDALSDRKEDGCKLCQCFPPGTVELSDGRVAPCEQLT 907
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQ 129
G C CKP VTG CD+C+ +Y GE GC C C+ GS T C++V GQCE
Sbjct: 908 GHCTCKPHVTGRNCDKCEEGYYHILSGE-GCTPCNCDAEGSYNRT--CNAVTGQCECRPG 964
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG 189
++ + H + V + F G + C D GS +LQC++ G+C C P
Sbjct: 965 ITGQ---HCDACVSYQYGFSREG-----CKPCDCDNI-----GSQDLQCDASGQCPCFPN 1011
Query: 190 VTGDKCDRCDVNHYD 204
V G +CDRC N ++
Sbjct: 1012 VEGRRCDRCKENKHN 1026
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YNRT G C +C+ G +C+ C Y S + C C+C+ IGS +LQC++ G+
Sbjct: 948 YNRTCNAVTGQC-ECRPGITGQHCDACVSYQYGFSREG-CKPCDCDNIGSQDLQCDASGQ 1005
Query: 75 CQCKPGVTGDKCDRCDVNHYD 95
C C P V G +CDRC N ++
Sbjct: 1006 CPCFPNVEGRRCDRCKENKHN 1026
>gi|350426806|ref|XP_003494547.1| PREDICTED: laminin subunit gamma-1-like [Bombus impatiens]
Length = 1620
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/125 (69%), Positives = 101/125 (80%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S RCFFDKELY +GHGGHCLDC+ +RDG NCE CR+N+YQ+ D++C ACNCN
Sbjct: 343 CNCNGYSERCFFDKELYKASGHGGHCLDCRANRDGANCEHCRENFYQRPEDSYCVACNCN 402
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS +LQCNSEG+CQCKPGVTGDKCDRC N+Y+FG GC SCECN AGS+ N P CD
Sbjct: 403 EIGSRSLQCNSEGKCQCKPGVTGDKCDRCAANYYNFGSYGCTSCECNAAGSLANAPTCDP 462
Query: 121 VKGQC 125
G C
Sbjct: 463 TNGVC 467
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 59/75 (78%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNSEG+CQCKPGVTGDKCDRC N+Y+FG GC SCECN AGS+ N P CD
Sbjct: 405 GSRSLQCNSEGKCQCKPGVTGDKCDRCAANYYNFGSYGCTSCECNAAGSLANAPTCDPTN 464
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 465 GVCICKENVEGKRCR 479
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 106/246 (43%), Gaps = 51/246 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNL--QCNSE-GRC-QCKPG 80
C +C R GP CE C D Y+ C C+CN LN CN E G C +C
Sbjct: 797 CSECPLGRTGPRCETCSDGYFGNPEKGIACRPCDCNNNIDLNAVRNCNHETGECLKCVNN 856
Query: 81 VTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVK----NTPNCDSVKGQCESAQLS 131
G C+ C +Y D E GCK C+C P G+V+ C+ + G C + +
Sbjct: 857 TAGFHCEECLSGYYGDALSDRKEDGCKLCQCFPPGTVELSDGRVAPCEQLTGHC-TCKPH 915
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS 180
GR N D +C+ Y + G GS N CN+
Sbjct: 916 VTGR-----------NCD----------KCEEGYYHILSGEGCTPCNCDAEGSYNRTCNA 954
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C+C+PG+TG CD C Y F GCK C+C+ GS CD+ GQC C N
Sbjct: 955 VTGQCECRPGITGQHCDACVSYQYGFSREGCKPCDCDNIGS--QDLQCDA-SGQCPCFPN 1011
Query: 240 VEGAQC 245
VEG +C
Sbjct: 1012 VEGRRC 1017
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ G NC+KC + YY CT CNC+ GS N CN+ G+C+C+PG+T
Sbjct: 908 GHCT-CKPHVTGRNCDKCEEGYYHILSGEGCTPCNCDAEGSYNRTCNAVTGQCECRPGIT 966
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD C Y F GCK C+C+ GS
Sbjct: 967 GQHCDACVSYQYGFSREGCKPCDCDNIGS 995
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQ-------CNSE 72
G CL C + G +CE+C YY + ++ C C C P G++ L
Sbjct: 848 GECLKCVNNTAGFHCEECLSGYYGDALSDRKEDGCKLCQCFPPGTVELSDGRVAPCEQLT 907
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQ 129
G C CKP VTG CD+C+ +Y GE GC C C+ GS T C++V GQCE
Sbjct: 908 GHCTCKPHVTGRNCDKCEEGYYHILSGE-GCTPCNCDAEGSYNRT--CNAVTGQCECRPG 964
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG 189
++ + H + V + F G + C D GS +LQC++ G+C C P
Sbjct: 965 ITGQ---HCDACVSYQYGFSREG-----CKPCDCDNI-----GSQDLQCDASGQCPCFPN 1011
Query: 190 VTGDKCDRCDVNHYD 204
V G +CDRC N ++
Sbjct: 1012 VEGRRCDRCKENKHN 1026
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YNRT G C +C+ G +C+ C Y S + C C+C+ IGS +LQC++ G+
Sbjct: 948 YNRTCNAVTGQC-ECRPGITGQHCDACVSYQYGFSREG-CKPCDCDNIGSQDLQCDASGQ 1005
Query: 75 CQCKPGVTGDKCDRCDVNHYD 95
C C P V G +CDRC N ++
Sbjct: 1006 CPCFPNVEGRRCDRCKENKHN 1026
>gi|340716937|ref|XP_003396947.1| PREDICTED: laminin subunit gamma-1-like isoform 3 [Bombus
terrestris]
Length = 1497
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/125 (69%), Positives = 101/125 (80%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S RCFFDKELY +GHGGHCLDC+ +RDG NCE CR+N+YQ+ D++C ACNCN
Sbjct: 235 CNCNGYSERCFFDKELYKASGHGGHCLDCRANRDGANCEHCRENFYQRPEDSYCVACNCN 294
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS +LQCNSEG+CQCKPGVTGDKCDRC N+Y+FG GC SCECN AGS+ N P CD
Sbjct: 295 EIGSRSLQCNSEGKCQCKPGVTGDKCDRCAANYYNFGSYGCTSCECNAAGSLANAPTCDP 354
Query: 121 VKGQC 125
G C
Sbjct: 355 TNGVC 359
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 59/75 (78%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNSEG+CQCKPGVTGDKCDRC N+Y+FG GC SCECN AGS+ N P CD
Sbjct: 297 GSRSLQCNSEGKCQCKPGVTGDKCDRCAANYYNFGSYGCTSCECNAAGSLANAPTCDPTN 356
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 357 GVCICKENVEGKRCR 371
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 106/246 (43%), Gaps = 51/246 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNL--QCNSE-GRC-QCKPG 80
C +C R GP CE C D Y+ C C+CN LN CN E G C +C
Sbjct: 689 CSECPLGRTGPRCETCSDGYFGNPEKGIACRPCDCNNNIDLNAVRNCNHETGECLKCVNN 748
Query: 81 VTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVK----NTPNCDSVKGQCESAQLS 131
G C+ C +Y D E GCK C+C P G+V+ C+ + G C + +
Sbjct: 749 TAGFHCEECLSGYYGDALSDRKEDGCKLCQCFPPGTVELSDGRVAPCEQLTGHC-TCKPH 807
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS 180
GR N D +C+ Y + G GS N CN+
Sbjct: 808 VTGR-----------NCD----------KCEEGYYHILSGEGCTPCNCDAEGSYNRTCNA 846
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C+C+PG+TG CD C Y F GCK C+C+ GS CD+ GQC C N
Sbjct: 847 VTGQCECRPGITGQHCDACVSYQYGFSREGCKPCDCDNIGS--QDLQCDA-SGQCPCFPN 903
Query: 240 VEGAQC 245
VEG +C
Sbjct: 904 VEGRRC 909
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ G NC+KC + YY CT CNC+ GS N CN+ G+C+C+PG+T
Sbjct: 800 GHCT-CKPHVTGRNCDKCEEGYYHILSGEGCTPCNCDAEGSYNRTCNAVTGQCECRPGIT 858
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD C Y F GCK C+C+ GS
Sbjct: 859 GQHCDACVSYQYGFSREGCKPCDCDNIGS 887
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQ-------CNSE 72
G CL C + G +CE+C YY + ++ C C C P G++ L
Sbjct: 740 GECLKCVNNTAGFHCEECLSGYYGDALSDRKEDGCKLCQCFPPGTVELSDGRVAPCEQLT 799
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQ 129
G C CKP VTG CD+C+ +Y GE GC C C+ GS T C++V GQCE
Sbjct: 800 GHCTCKPHVTGRNCDKCEEGYYHILSGE-GCTPCNCDAEGSYNRT--CNAVTGQCECRPG 856
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG 189
++ + H + V + F G + C D GS +LQC++ G+C C P
Sbjct: 857 ITGQ---HCDACVSYQYGFSREG-----CKPCDCDNI-----GSQDLQCDASGQCPCFPN 903
Query: 190 VTGDKCDRCDVNHYD 204
V G +CDRC N ++
Sbjct: 904 VEGRRCDRCKENKHN 918
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YNRT G C +C+ G +C+ C Y S + C C+C+ IGS +LQC++ G+
Sbjct: 840 YNRTCNAVTGQC-ECRPGITGQHCDACVSYQYGFSREG-CKPCDCDNIGSQDLQCDASGQ 897
Query: 75 CQCKPGVTGDKCDRCDVNHYD 95
C C P V G +CDRC N ++
Sbjct: 898 CPCFPNVEGRRCDRCKENKHN 918
>gi|307203704|gb|EFN82670.1| Laminin subunit gamma-1 [Harpegnathos saltator]
Length = 1646
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/125 (70%), Positives = 103/125 (82%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S+RC+FDKELY GHGGHCLDCQ +RDG NCE+CR+NYYQ+ DN+C AC+CN
Sbjct: 341 CNCNGYSDRCYFDKELYKLAGHGGHCLDCQANRDGANCERCRENYYQRPDDNYCIACHCN 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS +LQCNSEG+CQCKPGVTGDKCDRC N Y+FG GC SCEC+ AGS N+P+CD
Sbjct: 401 EIGSRSLQCNSEGKCQCKPGVTGDKCDRCAPNFYNFGSLGCTSCECSFAGSEGNSPSCDP 460
Query: 121 VKGQC 125
V G C
Sbjct: 461 VTGVC 465
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNSEG+CQCKPGVTGDKCDRC N Y+FG GC SCEC+ AGS N+P+CD V
Sbjct: 403 GSRSLQCNSEGKCQCKPGVTGDKCDRCAPNFYNFGSLGCTSCECSFAGSEGNSPSCDPVT 462
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 463 GVCVCKENVEGKRCR 477
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 106/246 (43%), Gaps = 51/246 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNL--QCNSE-GRC-QCKPG 80
C +C R GP CE C D YY C C+CN LN CN E G C +C
Sbjct: 795 CSECPIGRTGPRCETCSDGYYGNPERGLACRPCDCNNNIDLNAVRNCNHETGECLKCVNN 854
Query: 81 VTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVK----NTPNCDSVKGQCESAQLS 131
G CD C +Y D E GCK C+C P G+V+ CD + G C + + +
Sbjct: 855 TAGFHCDECLPGYYGDALSDRKEDGCKLCQCYPPGTVELDDGRVMPCDQLTGHC-TCKPN 913
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS 180
GR N D RC+ Y + G GS N C+
Sbjct: 914 VVGR-----------NCD----------RCEEGYYHIMSGEGCTPCNCDLEGSYNRTCDP 952
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+CQC+ GVTG CD C+ Y F GCK C+C+ GS CD+ GQC C N
Sbjct: 953 ITGQCQCRLGVTGQHCDACEPYQYGFSREGCKPCDCDSIGS--QDLQCDA-SGQCPCLTN 1009
Query: 240 VEGAQC 245
VEG +C
Sbjct: 1010 VEGRRC 1015
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ + G NC++C + YY CT CNC+ GS N C+ G+CQC+ GVT
Sbjct: 906 GHCT-CKPNVVGRNCDRCEEGYYHIMSGEGCTPCNCDLEGSYNRTCDPITGQCQCRLGVT 964
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD C+ Y F GCK C+C+ GS
Sbjct: 965 GQHCDACEPYQYGFSREGCKPCDCDSIGS 993
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YNRT G C C+ G +C+ C Y S + C C+C+ IGS +LQC++ G+
Sbjct: 946 YNRTCDPITGQC-QCRLGVTGQHCDACEPYQYGFSREG-CKPCDCDSIGSQDLQCDASGQ 1003
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
C C V G +CDRC N ++ + GC C
Sbjct: 1004 CPCLTNVEGRRCDRCKENKHN-RQNGCVDC 1032
>gi|307174744|gb|EFN65099.1| Laminin subunit gamma-1 [Camponotus floridanus]
Length = 1497
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 103/125 (82%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S+RC+FDKELY GHGGHCLDC+ +RDG NCE+CR+N+YQ+ D++C ACNC+
Sbjct: 237 CNCNGYSDRCYFDKELYKAMGHGGHCLDCRANRDGANCERCRENFYQRLEDDYCVACNCD 296
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS +LQCNS+G+CQCKPGVTGDKCDRC N Y+FG GC SCEC+ AGS N PNCDS
Sbjct: 297 EIGSRSLQCNSKGKCQCKPGVTGDKCDRCAANFYNFGSLGCTSCECSLAGSADNVPNCDS 356
Query: 121 VKGQC 125
+ G C
Sbjct: 357 ISGVC 361
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNS+G+CQCKPGVTGDKCDRC N Y+FG GC SCEC+ AGS N PNCDS+
Sbjct: 299 GSRSLQCNSKGKCQCKPGVTGDKCDRCAANFYNFGSLGCTSCECSLAGSADNVPNCDSIS 358
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 359 GVCVCKENVEGKRCR 373
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 106/246 (43%), Gaps = 51/246 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNL--QCNSE-GRC-QCKPG 80
C +C R GP CE C D YY C C+CN LN CN E G C +C
Sbjct: 691 CSECPIGRTGPRCETCSDGYYGNPERGLACRPCDCNNNIDLNAVRNCNHETGECLKCVNN 750
Query: 81 VTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVK----NTPNCDSVKGQCESAQLS 131
G C+ C +Y D E GCK C+C P G+ + CD + G C + +
Sbjct: 751 TAGFHCEECLSGYYGDALSDRREDGCKLCQCYPPGTSELDDGRVVPCDQLTGHC-ACKPH 809
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS 180
GR N D +C+ Y + G GS N C+
Sbjct: 810 VVGR-----------NCD----------KCEEGYYHIMSGEGCTVCNCDLEGSYNRTCDP 848
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+CQC+PGVTG CD C+ Y F GCKSC+C+ GS CD+ GQC C N
Sbjct: 849 ITGQCQCRPGVTGQHCDACEPYQYGFSREGCKSCDCDSIGS--QDLQCDA-NGQCPCLTN 905
Query: 240 VEGAQC 245
VEG +C
Sbjct: 906 VEGRRC 911
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ G NC+KC + YY CT CNC+ GS N C+ G+CQC+PGVT
Sbjct: 802 GHCA-CKPHVVGRNCDKCEEGYYHIMSGEGCTVCNCDLEGSYNRTCDPITGQCQCRPGVT 860
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD C+ Y F GCKSC+C+ GS
Sbjct: 861 GQHCDACEPYQYGFSREGCKSCDCDSIGS 889
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 110/260 (42%), Gaps = 33/260 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
CNCNG ++ C G C+ CQ + G NCE C YY K + C C
Sbjct: 623 CNCNGHADIC---------EAETGQCI-CQHNTAGSNCELCSRGYYGYPLKGTPDDCKPC 672
Query: 58 NCNPIGS-LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVK 113
C G + L N + C +C G TG +C+ C +Y E G C+ C+CN +
Sbjct: 673 PCPDNGPCILLGNNPDPICSECPIGRTGPRCETCSDGYYGNPERGLACRPCDCNNNIDLN 732
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR--CKR-DTYPLGH 170
NC+ G+C ++ G H E + G+ + D R CK YP G
Sbjct: 733 AVRNCNHETGECLKCVNNTAG-FHCEECLSGYY-----GDALSDRREDGCKLCQCYPPGT 786
Query: 171 G----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 225
G + G C CKP V G CD+C+ +Y GC C C+ GS T
Sbjct: 787 SELDDGRVVPCDQLTGHCACKPHVVGRNCDKCEEGYYHIMSGEGCTVCNCDLEGSYNRT- 845
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD + GQC+C+ V G C
Sbjct: 846 -CDPITGQCQCRPGVTGQHC 864
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YNRT G C C+ G +C+ C Y S + C +C+C+ IGS +LQC++ G+
Sbjct: 842 YNRTCDPITGQC-QCRPGVTGQHCDACEPYQYGFSREG-CKSCDCDSIGSQDLQCDANGQ 899
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
C C V G +CDRC N ++ + GC C
Sbjct: 900 CPCLTNVEGRRCDRCKENKHN-RQHGCIDC 928
>gi|270004765|gb|EFA01213.1| hypothetical protein TcasGA2_TC010540 [Tribolium castaneum]
Length = 1635
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/125 (68%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNGFSNRC++D+ELY TGHGGHCLDC +RDGPNCE+CR+NYY + D +C AC CN
Sbjct: 358 CNCNGFSNRCYYDEELYRLTGHGGHCLDCTANRDGPNCERCRENYYMRE-DGYCIACECN 416
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS +LQCN+EG+CQCKPGVTGDKCDRC VN+Y+F GCKSC C+ AGSV N PNCD
Sbjct: 417 EKGSRSLQCNAEGKCQCKPGVTGDKCDRCAVNYYEFSATGCKSCGCSEAGSVNNEPNCDP 476
Query: 121 VKGQC 125
G C
Sbjct: 477 YTGVC 481
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EG+CQCKPGVTGDKCDRC VN+Y+F GCKSC C+ AGSV N PNCD
Sbjct: 419 GSRSLQCNAEGKCQCKPGVTGDKCDRCAVNYYEFSATGCKSCGCSEAGSVNNEPNCDPYT 478
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 479 GVCYCKENVEGRRCR 493
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 107/249 (42%), Gaps = 56/249 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C +C G C+ C D Y+ F CT C+CN LN+ N G C
Sbjct: 811 CTECPVGHTGHKCDSCSDGYFGDPTGRFGPRQPCTQCDCN----LNIDPNGIGNCNTTTG 866
Query: 76 ---QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN--TPNCDSVKGQCE 126
+C G KC+ C +Y + C+ CECNPAG+ N + CD + G C
Sbjct: 867 ECLKCIHNTGGPKCEVCLPGYYGNALALPKGDCQPCECNPAGTESNGGSIECDRITGSC- 925
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNLQ 177
H V R N D + ++LR G G GS N
Sbjct: 926 ----------HCRPHVIGR-NCDQCEDGYFNLRS--------GEGCHSCNCDPIGSYNQT 966
Query: 178 CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
CN G+C C+PG+TG +CD C+ Y F GCK CEC+ GS + CD GQC C
Sbjct: 967 CNVYTGQCFCRPGITGLRCDHCEPFKYGFSSEGCKECECDKIGSRDH--QCDP-SGQCPC 1023
Query: 237 KDNVEGAQC 245
DNVEG +C
Sbjct: 1024 LDNVEGRRC 1032
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 95/202 (47%), Gaps = 30/202 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNFCTACNCNPIGSLN----LQCNS-EG 73
G CL C + GP CE C YY + GD C C CNP G+ + ++C+ G
Sbjct: 866 GECLKCIHNTGGPKCEVCLPGYYGNALALPKGD--CQPCECNPAGTESNGGSIECDRITG 923
Query: 74 RCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C C+P V G CD+C+ +++ GE GC SC C+P GS T C+ GQC
Sbjct: 924 SCHCRPHVIGRNCDQCEDGYFNLRSGE-GCHSCNCDPIGSYNQT--CNVYTGQC-----F 975
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT 191
R + T LR + F G + C+ D GS + QC+ G+C C V
Sbjct: 976 CRPGI-TGLRCDHCEPFK-YGFSSEGCKECECDKI-----GSRDHQCDPSGQCPCLDNVE 1028
Query: 192 GDKCDRCDVNHYDFGEAGCKSC 213
G +CDRC N YD + GC C
Sbjct: 1029 GRRCDRCKENKYD-RQRGCIDC 1049
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YN+T + G C C+ G C+ C Y S + C C C+ IGS + QC+ G+
Sbjct: 963 YNQTCNVYTGQCF-CRPGITGLRCDHCEPFKYGFSSEG-CKECECDKIGSRDHQCDPSGQ 1020
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
C C V G +CDRC N YD + GC C
Sbjct: 1021 CPCLDNVEGRRCDRCKENKYD-RQRGCIDC 1049
>gi|91092436|ref|XP_968632.1| PREDICTED: similar to laminin gamma 1 chain [Tribolium castaneum]
Length = 1615
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/125 (68%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNGFSNRC++D+ELY TGHGGHCLDC +RDGPNCE+CR+NYY + D +C AC CN
Sbjct: 338 CNCNGFSNRCYYDEELYRLTGHGGHCLDCTANRDGPNCERCRENYYMRE-DGYCIACECN 396
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS +LQCN+EG+CQCKPGVTGDKCDRC VN+Y+F GCKSC C+ AGSV N PNCD
Sbjct: 397 EKGSRSLQCNAEGKCQCKPGVTGDKCDRCAVNYYEFSATGCKSCGCSEAGSVNNEPNCDP 456
Query: 121 VKGQC 125
G C
Sbjct: 457 YTGVC 461
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EG+CQCKPGVTGDKCDRC VN+Y+F GCKSC C+ AGSV N PNCD
Sbjct: 399 GSRSLQCNAEGKCQCKPGVTGDKCDRCAVNYYEFSATGCKSCGCSEAGSVNNEPNCDPYT 458
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +CR
Sbjct: 459 GVCYCKENVEGRRCR 473
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 106/249 (42%), Gaps = 56/249 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRCQCKPG 80
C +C G C+ C D Y+ F CT C+CN LN+ N G C G
Sbjct: 791 CTECPVGHTGHKCDSCSDGYFGDPTGRFGPRQPCTQCDCN----LNIDPNGIGNCNTTTG 846
Query: 81 --------VTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN--TPNCDSVKGQCE 126
G KC+ C +Y + C+ CECNPAG+ N + CD + G C
Sbjct: 847 ECLKCIHNTGGPKCEVCLPGYYGNALALPKGDCQPCECNPAGTESNGGSIECDRITGSC- 905
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNLQ 177
H V R N D + ++LR G G GS N
Sbjct: 906 ----------HCRPHVIGR-NCDQCEDGYFNLRS--------GEGCHSCNCDPIGSYNQT 946
Query: 178 CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
CN G+C C+PG+TG +CD C+ Y F GCK CEC+ GS + CD GQC C
Sbjct: 947 CNVYTGQCFCRPGITGLRCDHCEPFKYGFSSEGCKECECDKIGSRDH--QCDP-SGQCPC 1003
Query: 237 KDNVEGAQC 245
DNVEG +C
Sbjct: 1004 LDNVEGRRC 1012
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 95/202 (47%), Gaps = 30/202 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNFCTACNCNPIGSLN----LQCNS-EG 73
G CL C + GP CE C YY + GD C C CNP G+ + ++C+ G
Sbjct: 846 GECLKCIHNTGGPKCEVCLPGYYGNALALPKGD--CQPCECNPAGTESNGGSIECDRITG 903
Query: 74 RCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C C+P V G CD+C+ +++ GE GC SC C+P GS T C+ GQC
Sbjct: 904 SCHCRPHVIGRNCDQCEDGYFNLRSGE-GCHSCNCDPIGSYNQT--CNVYTGQC-----F 955
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT 191
R + T LR + F G + C+ D GS + QC+ G+C C V
Sbjct: 956 CRPGI-TGLRCDHCEPFK-YGFSSEGCKECECDKI-----GSRDHQCDPSGQCPCLDNVE 1008
Query: 192 GDKCDRCDVNHYDFGEAGCKSC 213
G +CDRC N YD + GC C
Sbjct: 1009 GRRCDRCKENKYD-RQRGCIDC 1029
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YN+T + G C C+ G C+ C Y S + C C C+ IGS + QC+ G+
Sbjct: 943 YNQTCNVYTGQCF-CRPGITGLRCDHCEPFKYGFSSEG-CKECECDKIGSRDHQCDPSGQ 1000
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
C C V G +CDRC N YD + GC C
Sbjct: 1001 CPCLDNVEGRRCDRCKENKYD-RQRGCIDC 1029
>gi|156547421|ref|XP_001604560.1| PREDICTED: laminin subunit gamma-1-like [Nasonia vitripennis]
Length = 1617
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 99/125 (79%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S+ C+FDKELY TGHGGHC DC+ +RDG NCE CR+NYY + D +C ACNCN
Sbjct: 338 CNCNGYSDTCYFDKELYRLTGHGGHCTDCRDNRDGANCEHCRENYYARPEDGYCIACNCN 397
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS +LQCN+EG+CQCKPGVTGDKCDRC N +DF GC SCECN AGS+ NTP+CD
Sbjct: 398 EIGSRSLQCNAEGKCQCKPGVTGDKCDRCAANFFDFSNYGCTSCECNEAGSLYNTPSCDP 457
Query: 121 VKGQC 125
V G C
Sbjct: 458 VTGIC 462
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EG+CQCKPGVTGDKCDRC N +DF GC SCECN AGS+ NTP+CD V
Sbjct: 400 GSRSLQCNAEGKCQCKPGVTGDKCDRCAANFFDFSNYGCTSCECNEAGSLYNTPSCDPVT 459
Query: 232 GQCECKDNVEGAQCR 246
G C CKDNVEG +CR
Sbjct: 460 GICTCKDNVEGKRCR 474
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ G NC++C D YY G C ACNC+ GS N C++ G+C C+PGVT
Sbjct: 903 GHCF-CKSHVIGRNCDQCEDGYYHIRGGEGCIACNCDLEGSYNRTCDAITGQCSCRPGVT 961
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G +CD C Y F GC++CEC+ GS
Sbjct: 962 GQRCDACLPYQYGFSRDGCRACECDKIGS 990
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 104/245 (42%), Gaps = 49/245 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNL--QCNSE-GRC-QCKPG 80
C +C R GP CE C D Y+ C C CN LN CN E G C +C
Sbjct: 792 CSECPVGRTGPRCEICSDGYFGNPERGIPCRPCECNNNIDLNAVRNCNQETGECLKCVNN 851
Query: 81 VTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVKN----TPNCDSVKGQCE-SAQL 130
G C+ C +Y D + GCK C+C P G+ + CD + G C + +
Sbjct: 852 TAGAHCEECLPGYYGDALSDQKDDGCKLCQCYPPGTQERADGGVAPCDQLTGHCFCKSHV 911
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNLQCNS- 180
R N D + + +R G G GS N C++
Sbjct: 912 IGR-------------NCDQCEDGYYHIRG--------GEGCIACNCDLEGSYNRTCDAI 950
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C C+PGVTG +CD C Y F GC++CEC+ GS + CD+ GQC C NV
Sbjct: 951 TGQCSCRPGVTGQRCDACLPYQYGFSRDGCRACECDKIGS--HDMQCDA-NGQCPCLPNV 1007
Query: 241 EGAQC 245
EG C
Sbjct: 1008 EGRTC 1012
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 89/202 (44%), Gaps = 27/202 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLN------LQCNS-E 72
G CL C + G +CE+C YY D+ C C C P G+ C+
Sbjct: 843 GECLKCVNNTAGAHCEECLPGYYGDALSDQKDDGCKLCQCYPPGTQERADGGVAPCDQLT 902
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G C CK V G CD+C+ +Y G GC +C C+ GS T CD++ GQC
Sbjct: 903 GHCFCKSHVIGRNCDQCEDGYYHIRGGEGCIACNCDLEGSYNRT--CDAITGQCSCRPGV 960
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT 191
+ R L Q F G R C+ D GS ++QC++ G+C C P V
Sbjct: 961 TGQRCDACLPYQY--GFSRDG-----CRACECDKI-----GSHDMQCDANGQCPCLPNVE 1008
Query: 192 GDKCDRCDVNHYDFGEAGCKSC 213
G C+RC N Y+ + GC C
Sbjct: 1009 GRTCNRCKENKYN-RQYGCIDC 1029
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 112/260 (43%), Gaps = 33/260 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
CNCNG ++ C G C+ CQ + G NCE C +Y K + C C
Sbjct: 724 CNCNGHADIC---------EAETGQCI-CQHNTAGSNCEHCARGFYGHSLKGTPDDCQPC 773
Query: 58 NCNPIGS-LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVK 113
C G + L N + C +C G TG +C+ C ++ E G C+ CECN +
Sbjct: 774 PCPDNGPCILLGNNPDPICSECPVGRTGPRCEICSDGYFGNPERGIPCRPCECNNNIDLN 833
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR--CKR-DTYPLG- 169
NC+ G+C ++ G H E + G+ + D + CK YP G
Sbjct: 834 AVRNCNQETGECLKCVNNTAG-AHCEECLPGY-----YGDALSDQKDDGCKLCQCYPPGT 887
Query: 170 ---HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G + G C CK V G CD+C+ +Y G GC +C C+ GS T
Sbjct: 888 QERADGGVAPCDQLTGHCFCKSHVIGRNCDQCEDGYYHIRGGEGCIACNCDLEGSYNRT- 946
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD++ GQC C+ V G +C
Sbjct: 947 -CDAITGQCSCRPGVTGQRC 965
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YNRT G C C+ G C+ C Y S D C AC C+ IGS ++QC++ G+
Sbjct: 943 YNRTCDAITGQC-SCRPGVTGQRCDACLPYQYGFSRDG-CRACECDKIGSHDMQCDANGQ 1000
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
C C P V G C+RC N Y+ + GC C
Sbjct: 1001 CPCLPNVEGRTCNRCKENKYN-RQYGCIDC 1029
>gi|328717117|ref|XP_003246126.1| PREDICTED: laminin subunit gamma-1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1319
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 84/125 (67%), Positives = 99/125 (79%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN FS+RCFFDKELY+RTGHGGHCLDC G+RDG NCE+CR+NYYQ+ GD C+ C CN
Sbjct: 34 CNCNEFSHRCFFDKELYDRTGHGGHCLDCAGNRDGANCERCRENYYQRKGDTHCSPCECN 93
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
+GS +LQCNSEG+CQC+ GV GDKCDRC NH+DFG GCK C C AGS+ N P C++
Sbjct: 94 DVGSRSLQCNSEGKCQCRAGVAGDKCDRCAENHFDFGPTGCKPCGCIVAGSLDNEPRCEA 153
Query: 121 VKGQC 125
G C
Sbjct: 154 ENGNC 158
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 55/74 (74%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNSEG+CQC+ GV GDKCDRC NH+DFG GCK C C AGS+ N P C++
Sbjct: 96 GSRSLQCNSEGKCQCRAGVAGDKCDRCAENHFDFGPTGCKPCGCIVAGSLDNEPRCEAEN 155
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG QC
Sbjct: 156 GNCICKENVEGIQC 169
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 106/208 (50%), Gaps = 31/208 (14%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLN-----L 67
NRT G CL C + GP C++C Y+ + GD C C+C +G+ L
Sbjct: 539 NRTT--GDCLKCIYNTGGPQCDQCLPGYFGDALAPEKGD--CKPCDCFHLGTTETGFGPL 594
Query: 68 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQC 125
C+ G+CQCKP VTG CD+C+V H++ GC+SC+C+P GSV NT CD+ GQC
Sbjct: 595 ACDQLTGQCQCKPHVTGVNCDQCEVGHFNIASGEGCQSCDCDPVGSVNNT--CDTNTGQC 652
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQ 185
+ G + ++ G I + C DT G+++LQC++ G+C
Sbjct: 653 ----ICRPGITGKKCDACEPYHY---GFSIEGCKSCACDTI-----GAVSLQCDANGQCP 700
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
C V G +CD+C N YD + GC C
Sbjct: 701 CLENVEGRRCDQCKENKYD-RQRGCVDC 727
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
CNC+G ++ C D G C+ CQ + G NC++C YY + C C
Sbjct: 421 CNCHGHASICDADT---------GRCI-CQHNTAGENCDRCAKGYYGNAMQGTALDCKLC 470
Query: 58 NCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAG 110
C GS L C +C G G +CD C ++ G+ G CKSC+CN
Sbjct: 471 PCPNQGSCVLIGEDTVICLECPKGYGGPRCDICSDGYFGDPTGKTGPISICKSCDCNSNV 530
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKRDTYPL 168
NC+ G C ++ G Q + D D + C D + L
Sbjct: 531 DPNGIGNCNRTTGDCLKCIYNTGGPQCD----QCLPGYFGDALAPEKGDCKPC--DCFHL 584
Query: 169 G--HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G G L C+ G+CQCKP VTG CD+C+V H++ GC+SC+C+P GSV NT
Sbjct: 585 GTTETGFGPLACDQLTGQCQCKPHVTGVNCDQCEVGHFNIASGEGCQSCDCDPVGSVNNT 644
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD+ GQC C+ + G +C
Sbjct: 645 --CDTNTGQCICRPGITGKKC 663
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 116/254 (45%), Gaps = 65/254 (25%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQ----KSGD-NFCTACNCNPIGSLNLQCNSEGRC----- 75
CL+C GP C+ C D Y+ K+G + C +C+CN N+ N G C
Sbjct: 488 CLECPKGYGGPRCDICSDGYFGDPTGKTGPISICKSCDCNS----NVDPNGIGNCNRTTG 543
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNPAGSVKN---TPNCDSVKG 123
+C G +CD+C + FG+A CK C+C G+ + CD + G
Sbjct: 544 DCLKCIYNTGGPQCDQCLPGY--FGDALAPEKGDCKPCDCFHLGTTETGFGPLACDQLTG 601
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------G 172
QC+ + H + N D +C+ + + G G
Sbjct: 602 QCQC-------KPHV-----TGVNCD----------QCEVGHFNIASGEGCQSCDCDPVG 639
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S+N C++ G+C C+PG+TG KCD C+ HY F GCKSC C+ G+V + CD+
Sbjct: 640 SVNNTCDTNTGQCICRPGITGKKCDACEPYHYGFSIEGCKSCACDTIGAV--SLQCDA-N 696
Query: 232 GQCECKDNVEGAQC 245
GQC C +NVEG +C
Sbjct: 697 GQCPCLENVEGRRC 710
>gi|328717115|ref|XP_001944333.2| PREDICTED: laminin subunit gamma-1-like isoform 3 [Acyrthosiphon
pisum]
Length = 1631
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/125 (67%), Positives = 99/125 (79%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN FS+RCFFDKELY+RTGHGGHCLDC G+RDG NCE+CR+NYYQ+ GD C+ C CN
Sbjct: 346 CNCNEFSHRCFFDKELYDRTGHGGHCLDCAGNRDGANCERCRENYYQRKGDTHCSPCECN 405
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
+GS +LQCNSEG+CQC+ GV GDKCDRC NH+DFG GCK C C AGS+ N P C++
Sbjct: 406 DVGSRSLQCNSEGKCQCRAGVAGDKCDRCAENHFDFGPTGCKPCGCIVAGSLDNEPRCEA 465
Query: 121 VKGQC 125
G C
Sbjct: 466 ENGNC 470
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 55/74 (74%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNSEG+CQC+ GV GDKCDRC NH+DFG GCK C C AGS+ N P C++
Sbjct: 408 GSRSLQCNSEGKCQCRAGVAGDKCDRCAENHFDFGPTGCKPCGCIVAGSLDNEPRCEAEN 467
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG QC
Sbjct: 468 GNCICKENVEGIQC 481
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 106/208 (50%), Gaps = 31/208 (14%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLN-----L 67
NRT G CL C + GP C++C Y+ + GD C C+C +G+ L
Sbjct: 851 NRTT--GDCLKCIYNTGGPQCDQCLPGYFGDALAPEKGD--CKPCDCFHLGTTETGFGPL 906
Query: 68 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQC 125
C+ G+CQCKP VTG CD+C+V H++ GC+SC+C+P GSV NT CD+ GQC
Sbjct: 907 ACDQLTGQCQCKPHVTGVNCDQCEVGHFNIASGEGCQSCDCDPVGSVNNT--CDTNTGQC 964
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQ 185
+ G + ++ G I + C DT G+++LQC++ G+C
Sbjct: 965 ----ICRPGITGKKCDACEPYHY---GFSIEGCKSCACDTI-----GAVSLQCDANGQCP 1012
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
C V G +CD+C N YD + GC C
Sbjct: 1013 CLENVEGRRCDQCKENKYD-RQRGCVDC 1039
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
CNC+G ++ C D G C+ CQ + G NC++C YY + C C
Sbjct: 733 CNCHGHASICDADT---------GRCI-CQHNTAGENCDRCAKGYYGNAMQGTALDCKLC 782
Query: 58 NCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAG 110
C GS L C +C G G +CD C ++ G+ G CKSC+CN
Sbjct: 783 PCPNQGSCVLIGEDTVICLECPKGYGGPRCDICSDGYFGDPTGKTGPISICKSCDCNSNV 842
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKRDTYPL 168
NC+ G C ++ G Q + D D + C D + L
Sbjct: 843 DPNGIGNCNRTTGDCLKCIYNTGGPQCD----QCLPGYFGDALAPEKGDCKPC--DCFHL 896
Query: 169 G--HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G G L C+ G+CQCKP VTG CD+C+V H++ GC+SC+C+P GSV NT
Sbjct: 897 GTTETGFGPLACDQLTGQCQCKPHVTGVNCDQCEVGHFNIASGEGCQSCDCDPVGSVNNT 956
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD+ GQC C+ + G +C
Sbjct: 957 --CDTNTGQCICRPGITGKKC 975
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 116/254 (45%), Gaps = 65/254 (25%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQ----KSGD-NFCTACNCNPIGSLNLQCNSEGRC----- 75
CL+C GP C+ C D Y+ K+G + C +C+CN N+ N G C
Sbjct: 800 CLECPKGYGGPRCDICSDGYFGDPTGKTGPISICKSCDCNS----NVDPNGIGNCNRTTG 855
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNPAGSVKN---TPNCDSVKG 123
+C G +CD+C + FG+A CK C+C G+ + CD + G
Sbjct: 856 DCLKCIYNTGGPQCDQCLPGY--FGDALAPEKGDCKPCDCFHLGTTETGFGPLACDQLTG 913
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------G 172
QC+ + H + N D +C+ + + G G
Sbjct: 914 QCQC-------KPHV-----TGVNCD----------QCEVGHFNIASGEGCQSCDCDPVG 951
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S+N C++ G+C C+PG+TG KCD C+ HY F GCKSC C+ G+V + CD+
Sbjct: 952 SVNNTCDTNTGQCICRPGITGKKCDACEPYHYGFSIEGCKSCACDTIGAV--SLQCDA-N 1008
Query: 232 GQCECKDNVEGAQC 245
GQC C +NVEG +C
Sbjct: 1009 GQCPCLENVEGRRC 1022
>gi|357622601|gb|EHJ74027.1| putative laminin A chain [Danaus plexippus]
Length = 1635
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNGFSN+C+FDK+LY TGHGGHC+DC +RDGPNCE+C++NY+Q D C CNCN
Sbjct: 338 CNCNGFSNKCYFDKDLYENTGHGGHCMDCSENRDGPNCERCKENYFQSMQD-ICMPCNCN 396
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GS +LQCN+EG+CQCKPGVTGDKCD C NHY+F GCK C CN +GS NTP CD
Sbjct: 397 PTGSRSLQCNAEGKCQCKPGVTGDKCDICAPNHYEFTNQGCKPCGCNESGSFDNTPQCDP 456
Query: 121 VKGQC 125
+ G+C
Sbjct: 457 ITGRC 461
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 57/75 (76%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EG+CQCKPGVTGDKCD C NHY+F GCK C CN +GS NTP CD +
Sbjct: 399 GSRSLQCNAEGKCQCKPGVTGDKCDICAPNHYEFTNQGCKPCGCNESGSFDNTPQCDPIT 458
Query: 232 GQCECKDNVEGAQCR 246
G+C CK NVEG QCR
Sbjct: 459 GRCFCKQNVEGKQCR 473
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 108/253 (42%), Gaps = 62/253 (24%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C DC GP CE C D ++ F C C CN N+ N+ G C
Sbjct: 792 CTDCPSGYAGPRCEVCADGHFGDPTGQFGNSQECVECQCNG----NVDPNAVGNCNRTTG 847
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-------GCKSCECNPAGSVKNT---PNCDSVK 122
+C G+ CD+C + FG+A CK C+C+ AG++ + P CD +
Sbjct: 848 ECLKCIYNTAGEHCDKCLSGY--FGDALDQKKKGDCKPCQCHEAGTLVSAEGPPQCDGLT 905
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG---------GS 173
G C S G KN D + +D+ G G GS
Sbjct: 906 GFC-SCMPHVIG-----------KNCDQCEDGYFDISS--------GEGCRACDCNLEGS 945
Query: 174 LNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
N CNS G+C CKPG+ G CDRC HY F GC +C+C+ GS CD + G
Sbjct: 946 YNGTCNSVTGQCYCKPGIDGIHCDRCLAYHYGFSSDGCNNCDCDEWGSTNY--QCDML-G 1002
Query: 233 QCECKDNVEGAQC 245
QC C+ NVEG +C
Sbjct: 1003 QCSCQQNVEGRRC 1015
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKP 79
G G C C G NC++C D Y+ S C AC+CN GS N CNS G+C CKP
Sbjct: 903 GLTGFC-SCMPHVIGKNCDQCEDGYFDISSGEGCRACDCNLEGSYNGTCNSVTGQCYCKP 961
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
G+ G CDRC HY F GC +C+C+ GS CD + GQC S Q + GR
Sbjct: 962 GIDGIHCDRCLAYHYGFSSDGCNNCDCDEWGSTNY--QCDML-GQC-SCQQNVEGR 1013
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 90/197 (45%), Gaps = 31/197 (15%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYY------QKSGDNFCTACNCNPIGSLNL---- 67
NRT G CL C + G +C+KC Y+ +K GD C C C+ G+L
Sbjct: 843 NRTT--GECLKCIYNTAGEHCDKCLSGYFGDALDQKKKGD--CKPCQCHEAGTLVSAEGP 898
Query: 68 -QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
QC+ G C C P V G CD+C+ ++D GC++C+CN GS T C+SV GQ
Sbjct: 899 PQCDGLTGFCSCMPHVIGKNCDQCEDGYFDISSGEGCRACDCNLEGSYNGT--CNSVTGQ 956
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC 184
C +H + + F G C D + GS N QC+ G+C
Sbjct: 957 CYCK--PGIDGIHCDRCLAYHYGFSSDG-----CNNCDCDEW-----GSTNYQCDMLGQC 1004
Query: 185 QCKPGVTGDKCDRCDVN 201
C+ V G +CDRC N
Sbjct: 1005 SCQQNVEGRRCDRCMEN 1021
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 108/263 (41%), Gaps = 37/263 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC-TACNC 59
C+CNG ++ C G C+ C+ + G NCE C +Y G+ T +C
Sbjct: 725 CDCNGHAHIC---------DTATGFCI-CKHNTTGSNCELCAKGFY---GNAIAGTPDDC 771
Query: 60 NP------IGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-----DFGEAG-CKSCECN 107
P G + L S C G G +C+ C H+ FG + C C+CN
Sbjct: 772 KPCPCPKDSGCIQLMDQSIVCTDCPSGYAGPRCEVCADGHFGDPTGQFGNSQECVECQCN 831
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
NC+ G+C ++ G H + + + D + C+
Sbjct: 832 GNVDPNAVGNCNRTTGECLKCIYNTAGE-HCDKCLSGYFGDALDQKKKGDCKPCQCHEAG 890
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVK 222
T G QC+ G C C P V G CD+C+ ++D GC++C+CN GS
Sbjct: 891 TLVSAEGPP---QCDGLTGFCSCMPHVIGKNCDQCEDGYFDISSGEGCRACDCNLEGSYN 947
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T C+SV GQC CK ++G C
Sbjct: 948 GT--CNSVTGQCYCKPGIDGIHC 968
>gi|242020772|ref|XP_002430825.1| laminin A chain, putative [Pediculus humanus corporis]
gi|212516028|gb|EEB18087.1| laminin A chain, putative [Pediculus humanus corporis]
Length = 1616
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+SNRC+FDKELY +TGHGGHC+DC G RDGPNCE+C++NY+Q+ G + C ACNCN
Sbjct: 332 CNCNGYSNRCYFDKELYEQTGHGGHCIDCVGFRDGPNCERCKENYFQQEGGH-CVACNCN 390
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS + QCN EG+CQCKPGVTG+KCDRC+ N YDFG GCK C C GS++N P+CD
Sbjct: 391 EIGSRSRQCNKEGKCQCKPGVTGEKCDRCERNFYDFGPEGCKPCGCVVGGSLRNEPHCDP 450
Query: 121 VKGQC 125
G C
Sbjct: 451 STGTC 455
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS + QCN EG+CQCKPGVTG+KCDRC+ N YDFG GCK C C GS++N P+CD
Sbjct: 393 GSRSRQCNKEGKCQCKPGVTGEKCDRCERNFYDFGPEGCKPCGCVVGGSLRNEPHCDPST 452
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG +C+
Sbjct: 453 GTCLCKENVEGKRCQ 467
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 111/243 (45%), Gaps = 43/243 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG-SLNLQCNSEGRC--------Q 76
CL+C GP C+ C D Y+ F A C P + N+ N+ G C +
Sbjct: 786 CLECPLGYGGPRCDLCSDGYFGDPNGKFGEAQKCQPCDCNTNVDPNAVGNCNRTTGECLK 845
Query: 77 CKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCESAQ 129
C G +CD+C Y + CK C+C AG+++ P CD + GQC
Sbjct: 846 CIYNTGGPQCDQCLPGFYGDALAIPKGDCKMCQCYRAGTMETDGGPPLCDQLTGQC---- 901
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNLQCN-SEG 182
H + VQ N D + +++ C D P+G ++N C+ + G
Sbjct: 902 -------HCKPHVQG-VNCDVCEDGYFNIVSGEGCESCSCD--PIG---AINKTCDITTG 948
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+C C+ G+ G +CD C HY F E GCK C+C+ GS + CD+ GQC C +NVEG
Sbjct: 949 QCMCREGIVGKRCDMCAPYHYGFSEEGCKPCDCDLIGS--SDLQCDT-SGQCPCLENVEG 1005
Query: 243 AQC 245
+C
Sbjct: 1006 RRC 1008
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 97/213 (45%), Gaps = 39/213 (18%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN----- 66
NRT G CL C + GP C++C +Y GD C C C G++
Sbjct: 837 NRTT--GECLKCIYNTGGPQCDQCLPGFY---GDALAIPKGDCKMCQCYRAGTMETDGGP 891
Query: 67 -LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKG 123
L G+C CKP V G CD C+ +++ GE GC+SC C+P G++ T CD G
Sbjct: 892 PLCDQLTGQCHCKPHVQGVNCDVCEDGYFNIVSGE-GCESCSCDPIGAINKT--CDITTG 948
Query: 124 QCESAQLSSRGRVHT--ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE 181
QC + G V ++ F G + C D GS +LQC++
Sbjct: 949 QC----MCREGIVGKRCDMCAPYHYGFSEEG-----CKPCDCDLI-----GSSDLQCDTS 994
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G+C C V G +CDRC N YD + GC +CE
Sbjct: 995 GQCPCLENVEGRRCDRCKENKYD-RQRGCLNCE 1026
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 115/271 (42%), Gaps = 52/271 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG ++ C + G C+ CQ + +G NCE C +Y S + TA +C
Sbjct: 717 CNCNGHADSC---------EENTGRCI-CQHNTEGENCELCARGFYGNSLEG--TADDCK 764
Query: 61 P-------------IGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-----DFGEA-GC 101
P G N+ C +C G G +CD C ++ FGEA C
Sbjct: 765 PCPCPNKGACIQIGPGEDNIVC-----LECPLGYGGPRCDLCSDGYFGDPNGKFGEAQKC 819
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIWDLR 159
+ C+CN NC+ G+C ++ G Q F D D +
Sbjct: 820 QPCDCNTNVDPNAVGNCNRTTGECLKCIYNTGGPQCD----QCLPGFYGDALAIPKGDCK 875
Query: 160 RC---KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCE 214
C + T G L Q G+C CKP V G CD C+ +++ GE GC+SC
Sbjct: 876 MCQCYRAGTMETDGGPPLCDQLT--GQCHCKPHVQGVNCDVCEDGYFNIVSGE-GCESCS 932
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+P G++ T CD GQC C++ + G +C
Sbjct: 933 CDPIGAINKT--CDITTGQCMCREGIVGKRC 961
>gi|445068756|gb|AGE15318.1| LANB2 [Anopheles gambiae]
Length = 1624
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S +CFFD+ LYN TGHGGHC+DC +RDGPNCE+C++N++ + D +C C C+
Sbjct: 342 CNCNGYSTKCFFDRHLYNLTGHGGHCIDCGANRDGPNCERCKENFFMRE-DGYCINCGCD 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD
Sbjct: 401 PVGSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDP 460
Query: 121 VKGQC 125
V G C
Sbjct: 461 VTGVC 465
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD V
Sbjct: 403 GSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDPVT 462
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG CR
Sbjct: 463 GVCSCKENVEGRHCR 477
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C +C++ Y+ N C +CNC+PIGS N C++ G C CKPGV G KCD
Sbjct: 912 CKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNASCDTYSGDCFCKPGVVGKKCD 971
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C +Y F E GC +C+C+P+GS
Sbjct: 972 KCAPAYYGFSEDGCHACDCDPSGS 995
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 110/250 (44%), Gaps = 57/250 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
CL+C GP CE C D YY GD C C+CN N+ N+ G C
Sbjct: 795 CLECPVGYFGPRCELCSDGYY---GDPTGVYGSVRMCQPCDCNG----NVDPNAVGNCNR 847
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSV---KNTPNCDSVK 122
+C G CD+C H+ A C+ C C P G+ K CD++
Sbjct: 848 TTGECLKCIHNTAGPHCDQCLPGHFGDPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN 907
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNL 176
G C + + GR E + N W++ C D P+G S N
Sbjct: 908 GNCH-CKPNVIGRTCNECK-----------NGYWNIVSGNGCESCNCD--PIG---SYNA 950
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C++ G C CKPGV G KCD+C +Y F E GC +C+C+P+GS C+ GQC
Sbjct: 951 SCDTYSGDCFCKPGVVGKKCDKCAPAYYGFSEDGCHACDCDPSGS--KGSQCNQY-GQCP 1007
Query: 236 CKDNVEGAQC 245
C DNVEG +C
Sbjct: 1008 CNDNVEGRRC 1017
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 92/212 (43%), Gaps = 39/212 (18%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQ--- 68
NRT G CL C + GP+C++C ++ GD C C+C P G+ +
Sbjct: 846 NRTT--GECLKCIHNTAGPHCDQCLPGHF---GDPLAEPHGSCEECSCYPRGTEQTEKGI 900
Query: 69 --CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
C++ G C CKP V G C+ C +++ GC+SC C+P GS + CD+ G
Sbjct: 901 SICDAINGNCHCKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGD 958
Query: 125 CESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
C G V + + F G C D P G GS QCN
Sbjct: 959 C----FCKPGVVGKKCDKCAPAYYGFSEDG--------CHACDCDPSGSKGS---QCNQY 1003
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
G+C C V G +CDRC N YD + GC C
Sbjct: 1004 GQCPCNDNVEGRRCDRCKENKYDRHQ-GCLDC 1034
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTACNCNPIGS-LNLQCNSEGRCQCKP 79
G C+ CQ + G C++C YY + G + C C C G+ + + ++ +C
Sbjct: 742 GRCI-CQHNTAGDTCDQCAKGYYGNALGGTPYDCKRCPCPNNGACMQMAGDTVICLECPV 800
Query: 80 GVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G G +C+ C +Y +G C+ C+CN NC+ G+C ++
Sbjct: 801 GYFGPRCELCSDGYYGDPTGVYGSVRMCQPCDCNGNVDPNAVGNCNRTTGECLKCIHNTA 860
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
G H + + DP C R T G S+ N G C CKP V
Sbjct: 861 G-PHCDQCLPGHFG-DPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN--GNCHCKPNV 916
Query: 191 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C +++ GC+SC C+P GS + CD+ G C CK V G +C
Sbjct: 917 IGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGDCFCKPGVVGKKC 970
>gi|445068736|gb|AGE15308.1| LANB2 [Anopheles gambiae]
Length = 1624
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S +CFFD+ LYN TGHGGHC+DC +RDGPNCE+C++N++ + D +C C C+
Sbjct: 342 CNCNGYSTKCFFDRHLYNLTGHGGHCIDCGANRDGPNCERCKENFFMRE-DGYCINCGCD 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD
Sbjct: 401 PVGSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDP 460
Query: 121 VKGQC 125
V G C
Sbjct: 461 VTGVC 465
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD V
Sbjct: 403 GSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDPVT 462
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG CR
Sbjct: 463 GVCSCKENVEGRHCR 477
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C +C++ Y+ N C +CNC+PIGS N C++ G C CKPGV G KCD
Sbjct: 912 CKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNASCDTYSGDCFCKPGVVGKKCD 971
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C +Y F E GC +C+C+P+GS
Sbjct: 972 KCAPAYYGFSEDGCHACDCDPSGS 995
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 110/250 (44%), Gaps = 57/250 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
CL+C GP CE C D YY GD C C+CN N+ N+ G C
Sbjct: 795 CLECPVGYFGPRCELCSDGYY---GDPTGVYGSVRMCQPCDCNG----NVDPNAVGNCNR 847
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSV---KNTPNCDSVK 122
+C G CD+C H+ A C+ C C P G+ K CD++
Sbjct: 848 TTGECLKCIHNTAGPHCDQCLPGHFGDPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN 907
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNL 176
G C + + GR E + N W++ C D P+G S N
Sbjct: 908 GNCH-CKPNVIGRTCNECK-----------NGYWNIVSGNGCESCNCD--PIG---SYNA 950
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C++ G C CKPGV G KCD+C +Y F E GC +C+C+P+GS C+ GQC
Sbjct: 951 SCDTYSGDCFCKPGVVGKKCDKCAPAYYGFSEDGCHACDCDPSGS--KGSQCNQY-GQCP 1007
Query: 236 CKDNVEGAQC 245
C DNVEG +C
Sbjct: 1008 CNDNVEGRRC 1017
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 92/212 (43%), Gaps = 39/212 (18%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQ--- 68
NRT G CL C + GP+C++C ++ GD C C+C P G+ +
Sbjct: 846 NRTT--GECLKCIHNTAGPHCDQCLPGHF---GDPLAEPHGSCEECSCYPRGTEQTEKGI 900
Query: 69 --CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
C++ G C CKP V G C+ C +++ GC+SC C+P GS + CD+ G
Sbjct: 901 SICDAINGNCHCKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGD 958
Query: 125 CESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
C G V + + F G C D P G GS QCN
Sbjct: 959 C----FCKPGVVGKKCDKCAPAYYGFSEDG--------CHACDCDPSGSKGS---QCNQY 1003
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
G+C C V G +CDRC N YD + GC C
Sbjct: 1004 GQCPCNDNVEGRRCDRCKENKYDRHQ-GCLDC 1034
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTACNCNPIGS-LNLQCNSEGRCQCKP 79
G C+ CQ + G C++C YY + G + C C C G+ + + ++ +C
Sbjct: 742 GRCI-CQHNTAGDTCDQCAKGYYGNALGGTPYDCKRCPCPNNGACMQMAGDTVICLECPV 800
Query: 80 GVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G G +C+ C +Y +G C+ C+CN NC+ G+C ++
Sbjct: 801 GYFGPRCELCSDGYYGDPTGVYGSVRMCQPCDCNGNVDPNAVGNCNRTTGECLKCIHNTA 860
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
G H + + DP C R T G S+ N G C CKP V
Sbjct: 861 G-PHCDQCLPGHFG-DPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN--GNCHCKPNV 916
Query: 191 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C +++ GC+SC C+P GS + CD+ G C CK V G +C
Sbjct: 917 IGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGDCFCKPGVVGKKC 970
>gi|445068746|gb|AGE15313.1| LANB2 [Anopheles gambiae]
Length = 1624
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S +CFFD+ LYN TGHGGHC+DC +RDGPNCE+C++N++ + D +C C C+
Sbjct: 342 CNCNGYSTKCFFDRHLYNLTGHGGHCIDCGANRDGPNCERCKENFFMRE-DGYCINCGCD 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD
Sbjct: 401 PVGSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDP 460
Query: 121 VKGQC 125
V G C
Sbjct: 461 VTGVC 465
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD V
Sbjct: 403 GSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDPVT 462
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG CR
Sbjct: 463 GVCSCKENVEGRHCR 477
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C +C++ Y+ N C +CNC+PIGS N C++ G C CKPGV G KCD
Sbjct: 912 CKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNASCDTYSGDCFCKPGVVGKKCD 971
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C +Y F E GC +C+C+P+GS
Sbjct: 972 KCAPAYYGFSEDGCHACDCDPSGS 995
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 110/250 (44%), Gaps = 57/250 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
CL+C GP CE C D YY GD C C+CN N+ N+ G C
Sbjct: 795 CLECPVGYFGPRCELCSDGYY---GDPTGVYGSVRMCQPCDCNG----NVDPNAVGNCNR 847
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSV---KNTPNCDSVK 122
+C G CD+C H+ A C+ C C P G+ K CD++
Sbjct: 848 TTGECLKCIHNTAGPHCDQCLPGHFGDPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN 907
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNL 176
G C + + GR E + N W++ C D P+G S N
Sbjct: 908 GNCH-CKPNVIGRTCNECK-----------NGYWNIVSGNGCESCNCD--PIG---SYNA 950
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C++ G C CKPGV G KCD+C +Y F E GC +C+C+P+GS C+ GQC
Sbjct: 951 SCDTYSGDCFCKPGVVGKKCDKCAPAYYGFSEDGCHACDCDPSGS--KGSQCNQY-GQCP 1007
Query: 236 CKDNVEGAQC 245
C DNVEG +C
Sbjct: 1008 CNDNVEGRRC 1017
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 92/212 (43%), Gaps = 39/212 (18%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQ--- 68
NRT G CL C + GP+C++C ++ GD C C+C P G+ +
Sbjct: 846 NRTT--GECLKCIHNTAGPHCDQCLPGHF---GDPLAEPHGSCEECSCYPRGTEQTEKGI 900
Query: 69 --CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
C++ G C CKP V G C+ C +++ GC+SC C+P GS + CD+ G
Sbjct: 901 SICDAINGNCHCKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGD 958
Query: 125 CESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
C G V + + F G C D P G GS QCN
Sbjct: 959 C----FCKPGVVGKKCDKCAPAYYGFSEDG--------CHACDCDPSGSKGS---QCNQY 1003
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
G+C C V G +CDRC N YD + GC C
Sbjct: 1004 GQCPCNDNVEGRRCDRCKENKYDRHQ-GCLDC 1034
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTACNCNPIGS-LNLQCNSEGRCQCKP 79
G C+ CQ + G C++C YY + G + C C C G+ + + ++ +C
Sbjct: 742 GRCI-CQHNTAGDTCDQCAKGYYGNALGGTPYDCKRCPCPNNGACMQMAGDTVICLECPV 800
Query: 80 GVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G G +C+ C +Y +G C+ C+CN NC+ G+C ++
Sbjct: 801 GYFGPRCELCSDGYYGDPTGVYGSVRMCQPCDCNGNVDPNAVGNCNRTTGECLKCIHNTA 860
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
G H + + DP C R T G S+ N G C CKP V
Sbjct: 861 G-PHCDQCLPGHFG-DPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN--GNCHCKPNV 916
Query: 191 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C +++ GC+SC C+P GS + CD+ G C CK V G +C
Sbjct: 917 IGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGDCFCKPGVVGKKC 970
>gi|445068776|gb|AGE15328.1| LANB2 [Anopheles gambiae]
Length = 1624
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S +CFFD+ LYN TGHGGHC+DC +RDGPNCE+C++N++ + D +C C C+
Sbjct: 342 CNCNGYSTKCFFDRHLYNLTGHGGHCIDCGANRDGPNCERCKENFFMRE-DGYCINCGCD 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD
Sbjct: 401 PVGSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDP 460
Query: 121 VKGQC 125
V G C
Sbjct: 461 VTGVC 465
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD V
Sbjct: 403 GSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDPVT 462
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG CR
Sbjct: 463 GVCSCKENVEGRHCR 477
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C +C++ Y+ N C +CNC+PIGS N C++ G C CKPGV G KCD
Sbjct: 912 CKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNASCDTYSGDCFCKPGVVGKKCD 971
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C +Y F E GC +C+C+P+GS
Sbjct: 972 KCAPAYYGFSEDGCHACDCDPSGS 995
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 110/250 (44%), Gaps = 57/250 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
CL+C GP CE C D YY GD C C+CN N+ N+ G C
Sbjct: 795 CLECPVGYFGPRCELCSDGYY---GDPTGVYGSVRMCQPCDCNG----NVDPNAVGNCNR 847
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSV---KNTPNCDSVK 122
+C G CD+C H+ A C+ C C P G+ K CD++
Sbjct: 848 TTGECLKCIHNTAGPHCDQCLPGHFGDPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN 907
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNL 176
G C + + GR E + N W++ C D P+G S N
Sbjct: 908 GNCH-CKPNVIGRTCNECK-----------NGYWNIVSGNGCESCNCD--PIG---SYNA 950
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C++ G C CKPGV G KCD+C +Y F E GC +C+C+P+GS C+ GQC
Sbjct: 951 SCDTYSGDCFCKPGVVGKKCDKCAPAYYGFSEDGCHACDCDPSGS--KGSQCNQY-GQCP 1007
Query: 236 CKDNVEGAQC 245
C DNVEG +C
Sbjct: 1008 CNDNVEGRRC 1017
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 92/212 (43%), Gaps = 39/212 (18%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQ--- 68
NRT G CL C + GP+C++C ++ GD C C+C P G+ +
Sbjct: 846 NRTT--GECLKCIHNTAGPHCDQCLPGHF---GDPLAEPHGSCEECSCYPRGTEQTEKGI 900
Query: 69 --CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
C++ G C CKP V G C+ C +++ GC+SC C+P GS + CD+ G
Sbjct: 901 SICDAINGNCHCKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGD 958
Query: 125 CESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
C G V + + F G C D P G GS QCN
Sbjct: 959 C----FCKPGVVGKKCDKCAPAYYGFSEDG--------CHACDCDPSGSKGS---QCNQY 1003
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
G+C C V G +CDRC N YD + GC C
Sbjct: 1004 GQCPCNDNVEGRRCDRCKENKYDRHQ-GCLDC 1034
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTACNCNPIGS-LNLQCNSEGRCQCKP 79
G C+ CQ + G C++C YY + G + C C C G+ + + ++ +C
Sbjct: 742 GRCI-CQHNTAGDTCDQCAKGYYGNALGGTPYDCKRCPCPNNGACMQMAGDTVICLECPV 800
Query: 80 GVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G G +C+ C +Y +G C+ C+CN NC+ G+C ++
Sbjct: 801 GYFGPRCELCSDGYYGDPTGVYGSVRMCQPCDCNGNVDPNAVGNCNRTTGECLKCIHNTA 860
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
G H + + DP C R T G S+ N G C CKP V
Sbjct: 861 G-PHCDQCLPGHFG-DPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN--GNCHCKPNV 916
Query: 191 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C +++ GC+SC C+P GS + CD+ G C CK V G +C
Sbjct: 917 IGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGDCFCKPGVVGKKC 970
>gi|445068738|gb|AGE15309.1| LANB2 [Anopheles gambiae]
Length = 1623
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S +CFFD+ LYN TGHGGHC+DC +RDGPNCE+C++N++ + D +C C C+
Sbjct: 341 CNCNGYSTKCFFDRHLYNLTGHGGHCIDCGANRDGPNCERCKENFFMRE-DGYCINCGCD 399
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD
Sbjct: 400 PVGSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDP 459
Query: 121 VKGQC 125
V G C
Sbjct: 460 VTGVC 464
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD V
Sbjct: 402 GSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDPVT 461
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG CR
Sbjct: 462 GVCSCKENVEGRHCR 476
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C +C++ Y+ N C +CNC+PIGS N C++ G C CKPGV G KCD
Sbjct: 911 CKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNASCDTYSGDCFCKPGVVGKKCD 970
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C +Y F E GC +C+C+P+GS
Sbjct: 971 KCAPAYYGFSEDGCHACDCDPSGS 994
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 110/250 (44%), Gaps = 57/250 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
CL+C GP CE C D YY GD C C+CN N+ N+ G C
Sbjct: 794 CLECPVGYFGPRCELCSDGYY---GDPTGVYGSVRMCQPCDCNG----NVDPNAVGNCNR 846
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSV---KNTPNCDSVK 122
+C G CD+C H+ A C+ C C P G+ K CD++
Sbjct: 847 TTGECLKCIHNTAGPHCDQCLPGHFGDPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN 906
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNL 176
G C + + GR E + N W++ C D P+G S N
Sbjct: 907 GNCH-CKPNVIGRTCNECK-----------NGYWNIVSGNGCESCNCD--PIG---SYNA 949
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C++ G C CKPGV G KCD+C +Y F E GC +C+C+P+GS C+ GQC
Sbjct: 950 SCDTYSGDCFCKPGVVGKKCDKCAPAYYGFSEDGCHACDCDPSGS--KGSQCNQY-GQCP 1006
Query: 236 CKDNVEGAQC 245
C DNVEG +C
Sbjct: 1007 CNDNVEGRRC 1016
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 92/212 (43%), Gaps = 39/212 (18%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQ--- 68
NRT G CL C + GP+C++C ++ GD C C+C P G+ +
Sbjct: 845 NRTT--GECLKCIHNTAGPHCDQCLPGHF---GDPLAEPHGSCEECSCYPRGTEQTEKGI 899
Query: 69 --CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
C++ G C CKP V G C+ C +++ GC+SC C+P GS + CD+ G
Sbjct: 900 SICDAINGNCHCKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGD 957
Query: 125 CESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
C G V + + F G C D P G GS QCN
Sbjct: 958 C----FCKPGVVGKKCDKCAPAYYGFSEDG--------CHACDCDPSGSKGS---QCNQY 1002
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
G+C C V G +CDRC N YD + GC C
Sbjct: 1003 GQCPCNDNVEGRRCDRCKENKYDRHQ-GCLDC 1033
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTACNCNPIGS-LNLQCNSEGRCQCKP 79
G C+ CQ + G C++C YY + G + C C C G+ + + ++ +C
Sbjct: 741 GRCI-CQHNTAGDTCDQCAKGYYGNALGGTPYDCKRCPCPNNGACMQMAGDTVICLECPV 799
Query: 80 GVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G G +C+ C +Y +G C+ C+CN NC+ G+C ++
Sbjct: 800 GYFGPRCELCSDGYYGDPTGVYGSVRMCQPCDCNGNVDPNAVGNCNRTTGECLKCIHNTA 859
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
G H + + DP C R T G S+ N G C CKP V
Sbjct: 860 G-PHCDQCLPGHFG-DPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN--GNCHCKPNV 915
Query: 191 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C +++ GC+SC C+P GS + CD+ G C CK V G +C
Sbjct: 916 IGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGDCFCKPGVVGKKC 969
>gi|118777731|ref|XP_308240.3| AGAP007629-PA [Anopheles gambiae str. PEST]
gi|158285318|ref|XP_001687877.1| AGAP007629-PB [Anopheles gambiae str. PEST]
gi|116132043|gb|EAA04042.3| AGAP007629-PA [Anopheles gambiae str. PEST]
gi|157019934|gb|EDO64526.1| AGAP007629-PB [Anopheles gambiae str. PEST]
gi|445068732|gb|AGE15306.1| LANB2 [Anopheles gambiae]
gi|445068734|gb|AGE15307.1| LANB2 [Anopheles gambiae]
gi|445068740|gb|AGE15310.1| LANB2 [Anopheles gambiae]
gi|445068742|gb|AGE15311.1| LANB2 [Anopheles gambiae]
gi|445068744|gb|AGE15312.1| LANB2 [Anopheles gambiae]
gi|445068748|gb|AGE15314.1| LANB2 [Anopheles gambiae]
gi|445068750|gb|AGE15315.1| LANB2 [Anopheles gambiae]
gi|445068752|gb|AGE15316.1| LANB2 [Anopheles gambiae]
gi|445068754|gb|AGE15317.1| LANB2 [Anopheles gambiae]
gi|445068758|gb|AGE15319.1| LANB2 [Anopheles gambiae]
gi|445068760|gb|AGE15320.1| LANB2 [Anopheles gambiae]
gi|445068764|gb|AGE15322.1| LANB2 [Anopheles gambiae]
gi|445068766|gb|AGE15323.1| LANB2 [Anopheles gambiae]
gi|445068768|gb|AGE15324.1| LANB2 [Anopheles gambiae]
gi|445068770|gb|AGE15325.1| LANB2 [Anopheles gambiae]
gi|445068772|gb|AGE15326.1| LANB2 [Anopheles gambiae]
gi|445068774|gb|AGE15327.1| LANB2 [Anopheles gambiae]
gi|445068778|gb|AGE15329.1| LANB2 [Anopheles gambiae]
gi|445068780|gb|AGE15330.1| LANB2 [Anopheles gambiae]
Length = 1624
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S +CFFD+ LYN TGHGGHC+DC +RDGPNCE+C++N++ + D +C C C+
Sbjct: 342 CNCNGYSTKCFFDRHLYNLTGHGGHCIDCGANRDGPNCERCKENFFMRE-DGYCINCGCD 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD
Sbjct: 401 PVGSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDP 460
Query: 121 VKGQC 125
V G C
Sbjct: 461 VTGVC 465
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD V
Sbjct: 403 GSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDPVT 462
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG CR
Sbjct: 463 GVCSCKENVEGRHCR 477
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C +C++ Y+ N C +CNC+PIGS N C++ G C CKPGV G KCD
Sbjct: 912 CKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNASCDTYSGDCFCKPGVVGKKCD 971
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C +Y F E GC +C+C+P+GS
Sbjct: 972 KCAPAYYGFSEDGCHACDCDPSGS 995
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 110/250 (44%), Gaps = 57/250 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
CL+C GP CE C D YY GD C C+CN N+ N+ G C
Sbjct: 795 CLECPVGYFGPRCELCSDGYY---GDPTGVYGSVRMCQPCDCNG----NVDPNAVGNCNR 847
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSV---KNTPNCDSVK 122
+C G CD+C H+ A C+ C C P G+ K CD++
Sbjct: 848 TTGECLKCIHNTAGPHCDQCLPGHFGDPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN 907
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNL 176
G C + + GR E + N W++ C D P+G S N
Sbjct: 908 GNCH-CKPNVIGRTCNECK-----------NGYWNIVSGNGCESCNCD--PIG---SYNA 950
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C++ G C CKPGV G KCD+C +Y F E GC +C+C+P+GS C+ GQC
Sbjct: 951 SCDTYSGDCFCKPGVVGKKCDKCAPAYYGFSEDGCHACDCDPSGS--KGSQCNQY-GQCP 1007
Query: 236 CKDNVEGAQC 245
C DNVEG +C
Sbjct: 1008 CNDNVEGRRC 1017
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 92/212 (43%), Gaps = 39/212 (18%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQ--- 68
NRT G CL C + GP+C++C ++ GD C C+C P G+ +
Sbjct: 846 NRTT--GECLKCIHNTAGPHCDQCLPGHF---GDPLAEPHGSCEECSCYPRGTEQTEKGI 900
Query: 69 --CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
C++ G C CKP V G C+ C +++ GC+SC C+P GS + CD+ G
Sbjct: 901 SICDAINGNCHCKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGD 958
Query: 125 CESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
C G V + + F G C D P G GS QCN
Sbjct: 959 C----FCKPGVVGKKCDKCAPAYYGFSEDG--------CHACDCDPSGSKGS---QCNQY 1003
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
G+C C V G +CDRC N YD + GC C
Sbjct: 1004 GQCPCNDNVEGRRCDRCKENKYDRHQ-GCLDC 1034
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTACNCNPIGS-LNLQCNSEGRCQCKP 79
G C+ CQ + G C++C YY + G + C C C G+ + + ++ +C
Sbjct: 742 GRCI-CQHNTAGDTCDQCAKGYYGNALGGTPYDCKRCPCPNNGACMQMAGDTVICLECPV 800
Query: 80 GVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G G +C+ C +Y +G C+ C+CN NC+ G+C ++
Sbjct: 801 GYFGPRCELCSDGYYGDPTGVYGSVRMCQPCDCNGNVDPNAVGNCNRTTGECLKCIHNTA 860
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
G H + + DP C R T G S+ N G C CKP V
Sbjct: 861 G-PHCDQCLPGHFG-DPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN--GNCHCKPNV 916
Query: 191 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C +++ GC+SC C+P GS + CD+ G C CK V G +C
Sbjct: 917 IGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGDCFCKPGVVGKKC 970
>gi|6706335|emb|CAB66001.1| laminin gamma 1 precursor [Anopheles gambiae]
Length = 1623
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S +CFFD+ LYN TGHGGHC+DC +RDGPNCE+C++N++ + D +C C C+
Sbjct: 342 CNCNGYSTKCFFDRHLYNLTGHGGHCIDCGANRDGPNCERCKENFFMRE-DGYCINCGCD 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD
Sbjct: 401 PVGSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDP 460
Query: 121 VKGQC 125
V G C
Sbjct: 461 VTGVC 465
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD V
Sbjct: 403 GSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDPVT 462
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG CR
Sbjct: 463 GVCSCKENVEGRHCR 477
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C +C++ Y+ N C +CNC+PIGS N C++ G C CKPGV G KCD
Sbjct: 911 CKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNASCDTYSGDCFCKPGVVGKKCD 970
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C +Y F E GC +C+C+P+GS
Sbjct: 971 KCAPAYYGFSEDGCHACDCDPSGS 994
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 110/250 (44%), Gaps = 57/250 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
CL+C GP CE C D YY GD C C+CN N+ N+ G C
Sbjct: 794 CLECPVGYFGPRCELCSDGYY---GDPTGVYGSVRMCQPCDCNG----NVDPNAVGNCNR 846
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSV---KNTPNCDSVK 122
+C G CD+C H+ A C+ C C P G+ K CD++
Sbjct: 847 TTGECLKCIHNTAGPHCDQCLPGHFGDPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN 906
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNL 176
G C + + GR E + N W++ C D P+G S N
Sbjct: 907 GNCH-CKPNVIGRTCNECK-----------NGYWNIVSGNGCESCNCD--PIG---SYNA 949
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C++ G C CKPGV G KCD+C +Y F E GC +C+C+P+GS C+ GQC
Sbjct: 950 SCDTYSGDCFCKPGVVGKKCDKCAPAYYGFSEDGCHACDCDPSGS--KGSQCNQY-GQCP 1006
Query: 236 CKDNVEGAQC 245
C DNVEG +C
Sbjct: 1007 CNDNVEGRRC 1016
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 92/212 (43%), Gaps = 39/212 (18%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQ--- 68
NRT G CL C + GP+C++C ++ GD C C+C P G+ +
Sbjct: 845 NRTT--GECLKCIHNTAGPHCDQCLPGHF---GDPLAEPHGSCEECSCYPRGTEQTEKGI 899
Query: 69 --CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
C++ G C CKP V G C+ C +++ GC+SC C+P GS + CD+ G
Sbjct: 900 SICDAINGNCHCKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGD 957
Query: 125 CESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
C G V + + F G C D P G GS QCN
Sbjct: 958 C----FCKPGVVGKKCDKCAPAYYGFSEDG--------CHACDCDPSGSKGS---QCNQY 1002
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
G+C C V G +CDRC N YD + GC C
Sbjct: 1003 GQCPCNDNVEGRRCDRCKENKYDRHQ-GCLDC 1033
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTACNCNPIGS-LNLQCNSEGRCQCKP 79
G C+ CQ + G C++C YY + G + C C C G+ + + ++ +C
Sbjct: 741 GRCI-CQHNTAGDTCDQCAKGYYGNALGGTPYDCKRCPCPNNGACMQMAGDTVICLECPV 799
Query: 80 GVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G G +C+ C +Y +G C+ C+CN NC+ G+C ++
Sbjct: 800 GYFGPRCELCSDGYYGDPTGVYGSVRMCQPCDCNGNVDPNAVGNCNRTTGECLKCIHNTA 859
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
G H + + DP C R T G S+ N G C CKP V
Sbjct: 860 G-PHCDQCLPGHFG-DPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN--GNCHCKPNV 915
Query: 191 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C +++ GC+SC C+P GS + CD+ G C CK V G +C
Sbjct: 916 IGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGDCFCKPGVVGKKC 969
>gi|445068730|gb|AGE15305.1| LANB2 [Anopheles merus]
Length = 1623
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S +CFFD+ LYN TGHGGHC+DC +RDGPNCE+C++N++ + D +C C C+
Sbjct: 341 CNCNGYSTKCFFDRHLYNLTGHGGHCIDCGANRDGPNCERCKENFFMRE-DGYCINCGCD 399
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD
Sbjct: 400 PVGSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDP 459
Query: 121 VKGQC 125
V G C
Sbjct: 460 VTGVC 464
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD V
Sbjct: 402 GSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDPVT 461
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG CR
Sbjct: 462 GVCSCKENVEGRHCR 476
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C +C++ Y+ N C +CNC+PIGS N C++ G C CKPGV G KCD
Sbjct: 911 CKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNASCDTYSGDCFCKPGVVGKKCD 970
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C +Y F E GC +C+C+P+GS
Sbjct: 971 KCAPAYYGFSEDGCHACDCDPSGS 994
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 110/250 (44%), Gaps = 57/250 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
CL+C GP CE C D YY GD C C+CN N+ N+ G C
Sbjct: 794 CLECPVGYFGPRCELCSDGYY---GDPTGVYGSVRMCQPCDCNG----NVDPNAVGNCNR 846
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSV---KNTPNCDSVK 122
+C G CD+C H+ A C+ C C P G+ K CD++
Sbjct: 847 TTGECLKCIHNTAGPHCDQCLPGHFGDPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN 906
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNL 176
G C + + GR E + N W++ C D P+G S N
Sbjct: 907 GNCH-CKPNVIGRTCNECK-----------NGYWNIVSGNGCESCNCD--PIG---SYNA 949
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C++ G C CKPGV G KCD+C +Y F E GC +C+C+P+GS C+ GQC
Sbjct: 950 SCDTYSGDCFCKPGVVGKKCDKCAPAYYGFSEDGCHACDCDPSGS--KGSQCNQY-GQCP 1006
Query: 236 CKDNVEGAQC 245
C DNVEG +C
Sbjct: 1007 CNDNVEGRRC 1016
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 92/212 (43%), Gaps = 39/212 (18%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQ--- 68
NRT G CL C + GP+C++C ++ GD C C+C P G+ +
Sbjct: 845 NRTT--GECLKCIHNTAGPHCDQCLPGHF---GDPLAEPHGSCEECSCYPRGTEQTEKGI 899
Query: 69 --CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
C++ G C CKP V G C+ C +++ GC+SC C+P GS + CD+ G
Sbjct: 900 SICDAINGNCHCKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGD 957
Query: 125 CESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
C G V + + F G C D P G GS QCN
Sbjct: 958 C----FCKPGVVGKKCDKCAPAYYGFSEDG--------CHACDCDPSGSKGS---QCNQY 1002
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
G+C C V G +CDRC N YD + GC C
Sbjct: 1003 GQCPCNDNVEGRRCDRCKENKYDRHQ-GCLDC 1033
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTACNCNPIGS-LNLQCNSEGRCQCKP 79
G C+ CQ + G C++C YY + G + C C C G+ + + ++ +C
Sbjct: 741 GRCI-CQHNTAGDTCDQCAKGYYGNALGGTPYDCKRCPCPNNGACMQMAGDTVICLECPV 799
Query: 80 GVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G G +C+ C +Y +G C+ C+CN NC+ G+C ++
Sbjct: 800 GYFGPRCELCSDGYYGDPTGVYGSVRMCQPCDCNGNVDPNAVGNCNRTTGECLKCIHNTA 859
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
G H + + DP C R T G S+ N G C CKP V
Sbjct: 860 G-PHCDQCLPGHFG-DPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN--GNCHCKPNV 915
Query: 191 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C +++ GC+SC C+P GS + CD+ G C CK V G +C
Sbjct: 916 IGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGDCFCKPGVVGKKC 969
>gi|445068762|gb|AGE15321.1| LANB2 [Anopheles gambiae]
Length = 1624
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S +CFFD+ LYN TGHGGHC+DC +RDGPNCE+C++N++ + D +C C C+
Sbjct: 342 CNCNGYSTKCFFDRHLYNLTGHGGHCIDCGANRDGPNCERCKENFFIRE-DGYCINCGCD 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD
Sbjct: 401 PVGSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDP 460
Query: 121 VKGQC 125
V G C
Sbjct: 461 VTGVC 465
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EGRCQCKPGVTG+KCDRCD N+++FG GC+ C C+ GS+ NTP+CD V
Sbjct: 403 GSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNCDERGSLDNTPSCDPVT 462
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG CR
Sbjct: 463 GVCSCKENVEGRHCR 477
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C +C++ Y+ N C +CNC+PIGS N C++ G C CKPGV G KCD
Sbjct: 912 CKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNASCDTYSGDCFCKPGVVGKKCD 971
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C +Y F E GC +C+C+P+GS
Sbjct: 972 KCAPAYYGFSEDGCHACDCDPSGS 995
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 110/250 (44%), Gaps = 57/250 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
CL+C GP CE C D YY GD C C+CN N+ N+ G C
Sbjct: 795 CLECPVGYFGPRCELCSDGYY---GDPTGVYGSVRMCQPCDCNG----NVDPNAVGNCNR 847
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSV---KNTPNCDSVK 122
+C G CD+C H+ A C+ C C P G+ K CD++
Sbjct: 848 TTGECLKCIHNTAGPHCDQCLPGHFGDPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN 907
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNL 176
G C + + GR E + N W++ C D P+G S N
Sbjct: 908 GNCH-CKPNVIGRTCNECK-----------NGYWNIVSGNGCESCNCD--PIG---SYNA 950
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C++ G C CKPGV G KCD+C +Y F E GC +C+C+P+GS C+ GQC
Sbjct: 951 SCDTYSGDCFCKPGVVGKKCDKCAPAYYGFSEDGCHACDCDPSGS--KGSQCNQY-GQCP 1007
Query: 236 CKDNVEGAQC 245
C DNVEG +C
Sbjct: 1008 CNDNVEGRRC 1017
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 92/212 (43%), Gaps = 39/212 (18%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQ--- 68
NRT G CL C + GP+C++C ++ GD C C+C P G+ +
Sbjct: 846 NRTT--GECLKCIHNTAGPHCDQCLPGHF---GDPLAEPHGSCEECSCYPRGTEQTEKGI 900
Query: 69 --CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
C++ G C CKP V G C+ C +++ GC+SC C+P GS + CD+ G
Sbjct: 901 SICDAINGNCHCKPNVIGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGD 958
Query: 125 CESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
C G V + + F G C D P G GS QCN
Sbjct: 959 C----FCKPGVVGKKCDKCAPAYYGFSEDG--------CHACDCDPSGSKGS---QCNQY 1003
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
G+C C V G +CDRC N YD + GC C
Sbjct: 1004 GQCPCNDNVEGRRCDRCKENKYDRHQ-GCLDC 1034
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTACNCNPIGS-LNLQCNSEGRCQCKP 79
G C+ CQ + G C++C YY + G + C C C G+ + + ++ +C
Sbjct: 742 GRCI-CQHNTAGDTCDQCAKGYYGNALGGTPYDCKRCPCPNNGACMQMAGDTVICLECPV 800
Query: 80 GVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G G +C+ C +Y +G C+ C+CN NC+ G+C ++
Sbjct: 801 GYFGPRCELCSDGYYGDPTGVYGSVRMCQPCDCNGNVDPNAVGNCNRTTGECLKCIHNTA 860
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
G H + + DP C R T G S+ N G C CKP V
Sbjct: 861 G-PHCDQCLPGHFG-DPLAEPHGSCEECSCYPRGTEQTEKGISICDAIN--GNCHCKPNV 916
Query: 191 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C +++ GC+SC C+P GS + CD+ G C CK V G +C
Sbjct: 917 IGRTCNECKNGYWNIVSGNGCESCNCDPIGSYNAS--CDTYSGDCFCKPGVVGKKC 970
>gi|321466184|gb|EFX77181.1| hypothetical protein DAPPUDRAFT_321711 [Daphnia pulex]
Length = 1626
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNGFS+RC+FD+ L++ TGHGGHCLDC +RDGPNCE+CR+ +YQ+ DN+C CNC+
Sbjct: 346 CNCNGFSSRCYFDQALFDATGHGGHCLDCTANRDGPNCERCREQFYQRE-DNYCVPCNCD 404
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS +LQCN EG+C CKPGVTGDKCDRC+ N YDFG GC+ C CN AGS+ P CDS
Sbjct: 405 ETGSRSLQCNREGKCLCKPGVTGDKCDRCEENFYDFGPQGCRPCGCNVAGSLGGQPRCDS 464
Query: 121 VKGQC 125
G C
Sbjct: 465 ETGSC 469
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 55/74 (74%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN EG+C CKPGVTGDKCDRC+ N YDFG GC+ C CN AGS+ P CDS
Sbjct: 407 GSRSLQCNREGKCLCKPGVTGDKCDRCEENFYDFGPQGCRPCGCNVAGSLGGQPRCDSET 466
Query: 232 GQCECKDNVEGAQC 245
G C CKD+VEG +C
Sbjct: 467 GSCSCKDHVEGQRC 480
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 106/252 (42%), Gaps = 60/252 (23%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
CL+C GP CE C D Y+ F C C+CN N+ N+ G C
Sbjct: 799 CLECPVGYAGPRCELCSDGYFGDPEGRFGTRRPCQPCDCNG----NVDPNAVGNCNRTTG 854
Query: 76 ---QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK---NTPNCDSVKGQC 125
+C G +CD C + + C+ C+C G+++ T CD V GQC
Sbjct: 855 ECLKCIYNTAGYRCDSCLAGFFGDALALNKGDCRPCQCFRRGTLQLPSGTLQCDQVSGQC 914
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSL 174
E + GN + RC + L G G+L
Sbjct: 915 ECKP-------------------NVMGN---NCDRCLDGFFDLESGNGCQTCNCDPVGAL 952
Query: 175 NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
N CN G+C C+PGV G +CD C N + F GCK CEC+ GS+ + CD GQ
Sbjct: 953 NRTCNVRNGQCFCRPGVVGLRCDSCAPNQFGFSYDGCKPCECDTIGSL--SLQCDDPDGQ 1010
Query: 234 CECKDNVEGAQC 245
C C+DNVEG +C
Sbjct: 1011 CRCRDNVEGRRC 1022
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C +C+ + G NC++C D ++ N C CNC+P+G+LN CN G+C C+PGV
Sbjct: 912 GQC-ECKPNVMGNNCDRCLDGFFDLESGNGCQTCNCDPVGALNRTCNVRNGQCFCRPGVV 970
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +CD C N + F GCK CEC+ GS+ + CD GQC
Sbjct: 971 GLRCDSCAPNQFGFSYDGCKPCECDTIGSL--SLQCDDPDGQC 1011
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSL-----N 66
NRT G CL C + G C+ C ++ GD C C C G+L
Sbjct: 850 NRTT--GECLKCIYNTAGYRCDSCLAGFF---GDALALNKGDCRPCQCFRRGTLQLPSGT 904
Query: 67 LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
LQC+ G+C+CKP V G+ CDRC +D GC++C C+P G++ T C+ GQ
Sbjct: 905 LQCDQVSGQCECKPNVMGNNCDRCLDGFFDLESGNGCQTCNCDPVGALNRT--CNVRNGQ 962
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGR 183
C G V + F G + C+ DT GSL+LQC+ +G+
Sbjct: 963 C----FCRPGVVGLRCDSCAPNQF---GFSYDGCKPCECDTI-----GSLSLQCDDPDGQ 1010
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
C+C+ V G +CDRC N +D EAGCK C
Sbjct: 1011 CRCRDNVEGRRCDRCKENKHD-REAGCKDC 1039
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 115/266 (43%), Gaps = 40/266 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
CNCNG ++ C G C+ CQ + G NCE+C +Y + N C C
Sbjct: 732 CNCNGHADIC---------DAESGRCI-CQHNTAGDNCERCARGFYGNALQGSPNDCNPC 781
Query: 58 NCNPIGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVNHY-----DFG-EAGCKSCECNPA 109
C P G ++ E +C G G +C+ C ++ FG C+ C+CN
Sbjct: 782 PC-PNGGACIELADETVVCLECPVGYAGPRCELCSDGYFGDPEGRFGTRRPCQPCDCNGN 840
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS-RKNF--DPAGNRIWDLRRC---KR 163
NC+ G+C ++ G R S F D D R C +R
Sbjct: 841 VDPNAVGNCNRTTGECLKCIYNTAG-----YRCDSCLAGFFGDALALNKGDCRPCQCFRR 895
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
T L G LQC+ G+C+CKP V G+ CDRC +D GC++C C+P G++
Sbjct: 896 GTLQLPSG---TLQCDQVSGQCECKPNVMGNNCDRCLDGFFDLESGNGCQTCNCDPVGAL 952
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCRS 247
T C+ GQC C+ V G +C S
Sbjct: 953 NRT--CNVRNGQCFCRPGVVGLRCDS 976
>gi|170030896|ref|XP_001843323.1| laminin subunit gamma-1 [Culex quinquefasciatus]
gi|167868803|gb|EDS32186.1| laminin subunit gamma-1 [Culex quinquefasciatus]
Length = 1625
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S +CFFD++LYN TGHGGHC+DC +RDGPNCE+C++N++ + D +C C C+
Sbjct: 343 CNCNGYSTKCFFDRQLYNLTGHGGHCIDCGANRDGPNCERCKENFFMRE-DGYCINCACD 401
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCN+EG+CQCKPGVTGDKCDRC+ N Y+FG GC+ C C+ GS++N P+CD
Sbjct: 402 PVGSRSLQCNAEGKCQCKPGVTGDKCDRCENNFYNFGHHGCQPCNCDVRGSLENAPSCDP 461
Query: 121 VKGQC 125
V G C
Sbjct: 462 VNGIC 466
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 59/75 (78%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EG+CQCKPGVTGDKCDRC+ N Y+FG GC+ C C+ GS++N P+CD V
Sbjct: 404 GSRSLQCNAEGKCQCKPGVTGDKCDRCENNFYNFGHHGCQPCNCDVRGSLENAPSCDPVN 463
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NVEG CR
Sbjct: 464 GICSCKENVEGRHCR 478
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 107/250 (42%), Gaps = 57/250 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
CL+C GP CE C D Y+ C AC+CN N+ N+ G C
Sbjct: 796 CLECPVGYFGPRCELCSDGYFGDPTGVHGAIRMCQACDCNG----NVDPNAVGNCNRTTG 851
Query: 76 ---QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSV---KNTPNCDSVKGQC 125
+C G CD+C H+ C+ C C P G+ K CD G C
Sbjct: 852 ECLKCIHNTAGLHCDQCLPGHFGDPFALPHGNCEECSCYPRGTEQTDKGISICDPNNGNC 911
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNL 176
+ + + GR N + N W++ G+G GS N
Sbjct: 912 Q-CKPNVIGR-----------NCNECKNGYWNIIS--------GNGCENCNCDPTGSYNS 951
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C++ G C CKPG+ G KCD+C + HY F GCKSC+C+P+GS CD GQC
Sbjct: 952 SCDTYTGECYCKPGIIGKKCDQCALAHYGFSSEGCKSCDCDPSGS--KGSQCDQF-GQCP 1008
Query: 236 CKDNVEGAQC 245
C DNVEG +C
Sbjct: 1009 CNDNVEGRRC 1018
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGS------L 65
NRT G CL C + G +C++C ++ GD F C C+C P G+ +
Sbjct: 847 NRTT--GECLKCIHNTAGLHCDQCLPGHF---GDPFALPHGNCEECSCYPRGTEQTDKGI 901
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
++ + G CQCKP V G C+ C +++ GC++C C+P GS ++ CD+ G+
Sbjct: 902 SICDPNNGNCQCKPNVIGRNCNECKNGYWNIISGNGCENCNCDPTGSYNSS--CDTYTGE 959
Query: 125 CESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
C G + + + F G CK D P G GS QC+
Sbjct: 960 C----YCKPGIIGKKCDQCALAHYGFSSEG--------CKSCDCDPSGSKGS---QCDQF 1004
Query: 182 GRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G +CDRC N +D
Sbjct: 1005 GQCPCNDNVEGRRCDRCKENKFD 1027
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 27/239 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTACNCNPIGSLNLQCNSEGRC-QCKP 79
G C+ CQ + G C++C YY + G + C C C G+ + C +C
Sbjct: 743 GRCI-CQHNTAGDTCDQCAKGYYGNALGGTPYDCKRCPCPNNGACMQMADESVICLECPV 801
Query: 80 GVTGDKCDRCDVNHYDFGEAG--------CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G G +C+ C + FG+ C++C+CN NC+ G+C +
Sbjct: 802 GYFGPRCELCSDGY--FGDPTGVHGAIRMCQACDCNGNVDPNAVGNCNRTTGECLKCIHN 859
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHGGSLNLQCN-SEGRCQCK 187
+ G +H + + DP + C R T G S+ C+ + G CQCK
Sbjct: 860 TAG-LHCDQCLPGHFG-DPFALPHGNCEECSCYPRGTEQTDKGISI---CDPNNGNCQCK 914
Query: 188 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P V G C+ C +++ GC++C C+P GS ++ CD+ G+C CK + G +C
Sbjct: 915 PNVIGRNCNECKNGYWNIISGNGCENCNCDPTGSYNSS--CDTYTGECYCKPGIIGKKC 971
>gi|312373598|gb|EFR21309.1| hypothetical protein AND_17225 [Anopheles darlingi]
Length = 1682
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 99/126 (78%), Gaps = 1/126 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S +CFFD+ LYN TGHGGHC+DC +RDGPNCE+C++N++ + D +C C C+
Sbjct: 400 CNCNGYSTKCFFDRHLYNLTGHGGHCMDCGANRDGPNCERCKENFFMRD-DGYCINCACD 458
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCN+EGRCQCKPGVTG+KCDRCD N++ FG GC+ C C+ GS N P+CD
Sbjct: 459 PVGSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFSFGPHGCQPCNCDVRGSRDNAPSCDP 518
Query: 121 VKGQCE 126
V G C+
Sbjct: 519 VTGMCD 524
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 58/75 (77%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCN+EGRCQCKPGVTG+KCDRCD N++ FG GC+ C C+ GS N P+CD V
Sbjct: 461 GSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFSFGPHGCQPCNCDVRGSRDNAPSCDPVT 520
Query: 232 GQCECKDNVEGAQCR 246
G C+CK+NVEG CR
Sbjct: 521 GMCDCKENVEGRHCR 535
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 111/247 (44%), Gaps = 51/247 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
CL+C G CE C D YY C AC+CN N+ N+ G C
Sbjct: 853 CLECPVGYFGSRCELCSDGYYGDPTGVHGAVRVCQACDCNG----NVDQNAVGNCNRTTG 908
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSV---KNTPNCDSVKGQC 125
+C G CD+C H+ A C+ C C P G+ K CDS+ G C
Sbjct: 909 ECLKCIHNTAGPHCDQCLPGHFGDPLAEPHGNCEECSCYPHGTEQTEKGISICDSINGDC 968
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNLQCN 179
+ + GR+ E + N W++ C D P+G S N C+
Sbjct: 969 H-CKPNVVGRICNECK-----------NGYWNIVSGNGCESCNCD--PIG---SFNASCD 1011
Query: 180 S-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G C CKPGV G KCD+C HY F + GC++CEC+P+GS K T CD GQC C +
Sbjct: 1012 IFNGECFCKPGVVGKKCDKCAAAHYGFSDEGCRACECDPSGS-KGT-QCDQY-GQCPCNE 1068
Query: 239 NVEGAQC 245
NVEG +C
Sbjct: 1069 NVEGRRC 1075
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 94/211 (44%), Gaps = 37/211 (17%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQ--- 68
NRT G CL C + GP+C++C ++ GD C C+C P G+ +
Sbjct: 904 NRTT--GECLKCIHNTAGPHCDQCLPGHF---GDPLAEPHGNCEECSCYPHGTEQTEKGI 958
Query: 69 --CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
C+S G C CKP V G C+ C +++ GC+SC C+P GS +CD G+
Sbjct: 959 SICDSINGDCHCKPNVVGRICNECKNGYWNIVSGNGCESCNCDPIGSF--NASCDIFNGE 1016
Query: 125 CESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG 182
C G V + + F G R C+ D P G G+ QC+ G
Sbjct: 1017 C----FCKPGVVGKKCDKCAAAHYGFSDEG-----CRACECD--PSGSKGT---QCDQYG 1062
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
+C C V G +CDRC N YD + GC C
Sbjct: 1063 QCPCNENVEGRRCDRCKENKYDRHQ-GCLDC 1092
>gi|195589099|ref|XP_002084293.1| LanB2 [Drosophila simulans]
gi|194196302|gb|EDX09878.1| LanB2 [Drosophila simulans]
Length = 1575
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG +++CFFD L+NRTGHGGHCLDC+ +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 359 CNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRD-DGYCVNCACD 417
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 418 PVGSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDTGGSHQNTPACDT 477
Query: 121 VKGQC 125
G C
Sbjct: 478 ETGIC 482
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 57/74 (77%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 420 GSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDTGGSHQNTPACDTET 479
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 480 GICFCKENVEGRRC 493
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G +C +C+ Y+ N C C C+P+GS N C+ G+C C+PGV G +CD
Sbjct: 876 CKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCD 935
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C+ Y F GCK CEC+ +GS
Sbjct: 936 QCENYFYGFSSEGCKPCECDESGS 959
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 105/255 (41%), Gaps = 67/255 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
C +C G CE+C D ++ GD C +C+CN N+ N+ G C
Sbjct: 759 CTECPKGYFGSRCEQCSDGFF---GDPTGLLGEVQTCKSCDCNG----NVDPNAVGNCNR 811
Query: 76 ------QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVK 122
+C G+ CD+C H+ C C C AG+ ++ CD V
Sbjct: 812 TTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVT 871
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------- 171
GQC+ + + GR D C+ + + G
Sbjct: 872 GQCQ-CKPNVIGR---------------------DCGECQPGYFNIRSGNGCENCLCDPV 909
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS N C+ G+C C+PGV G +CD+C+ Y F GCK CEC+ +GS CD
Sbjct: 910 GSYNSTCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSEGCKPCECDESGS--KGFQCDQ- 966
Query: 231 KGQCECKDNVEGAQC 245
GQC C DNVEG +C
Sbjct: 967 NGQCPCNDNVEGRRC 981
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 42/205 (20%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN----- 66
NRT G CL C + G +C++C ++ GD C C+C G+
Sbjct: 810 NRTT--GECLKCIHNTAGEHCDQCLSGHF---GDPLALPHGRCDRCSCYEAGTEQDEQSI 864
Query: 67 LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
+C+ G+CQCKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 865 TRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--CDRYSGQ 922
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-----RRCKRDTYPLGHGGSLNLQCN 179
C H V ++ D N + + C+ D GS QC+
Sbjct: 923 C-----------HCRPGVMGQR-CDQCENYFYGFSSEGCKPCECD-----ESGSKGFQCD 965
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G +CDRC N YD
Sbjct: 966 QNGQCPCNDNVEGRRCDRCKENKYD 990
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 63/248 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL--DCQGDRDGPNCEKCRDNY----YQKSGD--- 51
C CNG +++C + HG L +C+ + DGP+C++C Y +++S
Sbjct: 299 CKCNGHASKCVPSTGM-----HGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEV 353
Query: 52 NFCTACNCNPIG-------SLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
N C ACNCN + +L + G C C+ G C+RC N Y + C +
Sbjct: 354 NECKACNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRDDGYCVN 413
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C C+P GS S Q +S G+ + V K RC
Sbjct: 414 CACDPVGS--------------RSLQCNSHGKCQCKPGVTGDK-----------CDRCDN 448
Query: 164 DTYPLG----------HGGSL--NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
+ Y G GGS C++E G C CK V G +C+ C ++ +
Sbjct: 449 NYYQFGPHGCQQCGCDTGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKTNR 508
Query: 209 -GCKSCEC 215
GC C C
Sbjct: 509 FGCTPCFC 516
>gi|17737557|ref|NP_524006.1| laminin B2 [Drosophila melanogaster]
gi|2506807|sp|P15215.2|LAMC1_DROME RecName: Full=Laminin subunit gamma-1; AltName: Full=Laminin B2
chain; Flags: Precursor
gi|157806|gb|AAA28665.1| laminin B2 chain [Drosophila melanogaster]
gi|7294908|gb|AAF50238.1| laminin B2 [Drosophila melanogaster]
gi|60678071|gb|AAX33542.1| LD15803p [Drosophila melanogaster]
Length = 1639
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG +++CFFD L+NRTGHGGHCLDC+ +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 359 CNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRD-DGYCVNCACD 417
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 418 PVGSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDT 477
Query: 121 VKGQC 125
G C
Sbjct: 478 ETGIC 482
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 57/74 (77%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 420 GSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDTET 479
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 480 GICFCKENVEGRRC 493
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G +C +C+ Y+ N C C C+P+GS N C+ G+C C+PGV G +CD
Sbjct: 928 CKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCD 987
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C+ Y F GCK CEC+ +GS
Sbjct: 988 QCENYFYGFSSEGCKPCECDESGS 1011
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 105/255 (41%), Gaps = 67/255 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
C +C G CE+C D ++ GD C +C+CN N+ N+ G C
Sbjct: 811 CTECPKGYFGSRCEQCSDGFF---GDPTGLLGEVQTCKSCDCNG----NVDPNAVGNCNR 863
Query: 76 ------QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVK 122
+C G+ CD+C H+ C C C AG+ ++ CD V
Sbjct: 864 TTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVT 923
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------- 171
GQC+ + + GR D C+ + + G
Sbjct: 924 GQCQ-CKPNVIGR---------------------DCGECQPGYFNIRSGNGCENCLCDPV 961
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS N C+ G+C C+PGV G +CD+C+ Y F GCK CEC+ +GS CD
Sbjct: 962 GSYNSTCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSEGCKPCECDESGS--KGFQCDQ- 1018
Query: 231 KGQCECKDNVEGAQC 245
GQC C DNVEG +C
Sbjct: 1019 NGQCPCNDNVEGRRC 1033
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 42/205 (20%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN----- 66
NRT G CL C + G +C++C ++ GD C C+C G+
Sbjct: 862 NRTT--GECLKCIHNTAGEHCDQCLSGHF---GDPLALPHGRCDRCSCYEAGTEQDEQSI 916
Query: 67 LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
+C+ G+CQCKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 917 TRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--CDRYSGQ 974
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-----RRCKRDTYPLGHGGSLNLQCN 179
C H V ++ D N + + C+ D GS QC+
Sbjct: 975 C-----------HCRPGVMGQR-CDQCENYFYGFSSEGCKPCECD-----ESGSKGFQCD 1017
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G +CDRC N YD
Sbjct: 1018 QNGQCPCNDNVEGRRCDRCKENKYD 1042
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 112/261 (42%), Gaps = 34/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C+C+G ++ C D E G C+ CQ + G NC++C +Y + N C C
Sbjct: 744 CDCHGHADIC--DSET-------GRCI-CQHNTHGDNCDQCAKGFYGNALGGTPNDCKRC 793
Query: 58 NCNPIGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPA 109
C P LQ N + +C G G +C++C + GE CKSC+CN
Sbjct: 794 PC-PNDGACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTGLLGEVQTCKSCDCNGN 852
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
NC+ G+C ++ G H + + S DP RC R Y
Sbjct: 853 VDPNAVGNCNRTTGECLKCIHNTAGE-HCD-QCLSGHFGDPLA---LPHGRCDRCSCYEA 907
Query: 169 GH---GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G S+ G+CQCKP V G C C +++ GC++C C+P GS +T
Sbjct: 908 GTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST 967
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQC C+ V G +C
Sbjct: 968 --CDRYSGQCHCRPGVMGQRC 986
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 91/236 (38%), Gaps = 41/236 (17%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE C Y G F C C+C+ + C+SE GRC C+ GD CD+C
Sbjct: 718 GQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADI---CDSETGRCICQHNTHGDNCDQC 774
Query: 90 DVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
Y G CK C C G+ + +C SR Q
Sbjct: 775 AKGFYGNALGGTPNDCKRCPCPNDGACLQINEDTVICTECPKGYFGSRCE-------QCS 827
Query: 146 KNF--DPAGNRIWDLRRCKR-----DTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKCD 196
F DP G + +++ CK + P G CN + G C +C G+ CD
Sbjct: 828 DGFFGDPTG-LLGEVQTCKSCDCNGNVDPNAVGN-----CNRTTGECLKCIHNTAGEHCD 881
Query: 197 RCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
+C H+ C C C AG+ ++ CD V GQC+CK NV G C
Sbjct: 882 QCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDC 937
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 63/248 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL--DCQGDRDGPNCEKCRDNY----YQKSGD--- 51
C CNG +++C + HG L +C+ + DGP+C++C Y +++S
Sbjct: 299 CKCNGHASKCVPSTGM-----HGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEV 353
Query: 52 NFCTACNCNPIG-------SLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
N C ACNCN + +L + G C C+ G C+RC N Y + C +
Sbjct: 354 NECKACNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRDDGYCVN 413
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C C+P GS S Q +S G+ + V K RC
Sbjct: 414 CACDPVGS--------------RSLQCNSHGKCQCKPGVTGDK-----------CDRCDN 448
Query: 164 DTYPLG----------HGGSL--NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE--- 207
+ Y G GGS C++E G C CK V G +C+ C ++ +
Sbjct: 449 NYYQFGPHGCQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNR 508
Query: 208 AGCKSCEC 215
GC C C
Sbjct: 509 FGCTPCFC 516
>gi|157804|gb|AAA28664.1| laminin B2 chain [Drosophila melanogaster]
Length = 1639
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG +++CFFD L+NRTGHGGHCLDC+ +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 359 CNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRD-DGYCVNCACD 417
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 418 PVGSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDT 477
Query: 121 VKGQC 125
G C
Sbjct: 478 ETGIC 482
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 57/74 (77%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 420 GSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDTET 479
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 480 GICFCKENVEGRRC 493
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G +C +C+ Y+ N C C C+P+GS N C+ G+C C+PGV G +CD
Sbjct: 928 CKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCD 987
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C+ Y F GCK CEC+ +GS
Sbjct: 988 QCENYFYGFSSEGCKPCECDESGS 1011
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 105/255 (41%), Gaps = 67/255 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
C +C G CE+C D ++ GD C +C+CN N+ N+ G C
Sbjct: 811 CTECPKGYFGSRCEQCSDGFF---GDPTGLLGEVQTCKSCDCNG----NVDPNAVGNCNR 863
Query: 76 ------QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVK 122
+C G+ CD+C H+ C C C AG+ ++ CD V
Sbjct: 864 TTGECLKCIHNTAGEHCDQCLSGHFGDPPALPHGRCDRCSCYEAGTEQDEQSITRCDQVT 923
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------- 171
GQC+ + + GR D C+ + + G
Sbjct: 924 GQCQ-CKPNVIGR---------------------DCGECQPGYFNIRSGNGCENCLCDPV 961
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS N C+ G+C C+PGV G +CD+C+ Y F GCK CEC+ +GS CD
Sbjct: 962 GSYNSTCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSEGCKPCECDESGS--KGFQCDQ- 1018
Query: 231 KGQCECKDNVEGAQC 245
GQC C DNVEG +C
Sbjct: 1019 NGQCPCNDNVEGRRC 1033
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 111/261 (42%), Gaps = 34/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C+C+G ++ C D E G C+ CQ + G NC++C +Y + N C C
Sbjct: 744 CDCHGHADIC--DSET-------GRCI-CQHNTHGDNCDQCAKGFYGNALGGTPNDCKRC 793
Query: 58 NCNPIGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPA 109
C P LQ N + +C G G +C++C + GE CKSC+CN
Sbjct: 794 PC-PNDGACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTGLLGEVQTCKSCDCNGN 852
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
NC+ G+C ++ G H + + PA RC R Y
Sbjct: 853 VDPNAVGNCNRTTGECLKCIHNTAGE-HCDQCLSGHFGDPPA----LPHGRCDRCSCYEA 907
Query: 169 GH---GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G S+ G+CQCKP V G C C +++ GC++C C+P GS +T
Sbjct: 908 GTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST 967
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQC C+ V G +C
Sbjct: 968 --CDRYSGQCHCRPGVMGQRC 986
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 42/205 (20%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD------NFCTACNCNPIGSLN----- 66
NRT G CL C + G +C++C ++ GD C C+C G+
Sbjct: 862 NRTT--GECLKCIHNTAGEHCDQCLSGHF---GDPPALPHGRCDRCSCYEAGTEQDEQSI 916
Query: 67 LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
+C+ G+CQCKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 917 TRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--CDRYSGQ 974
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-----RRCKRDTYPLGHGGSLNLQCN 179
C H V ++ D N + + C+ D GS QC+
Sbjct: 975 C-----------HCRPGVMGQR-CDQCENYFYGFSSEGCKPCECD-----ESGSKGFQCD 1017
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G +CDRC N YD
Sbjct: 1018 QNGQCPCNDNVEGRRCDRCKENKYD 1042
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 91/236 (38%), Gaps = 41/236 (17%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE C Y G F C C+C+ + C+SE GRC C+ GD CD+C
Sbjct: 718 GQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADI---CDSETGRCICQHNTHGDNCDQC 774
Query: 90 DVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
Y G CK C C G+ + +C SR Q
Sbjct: 775 AKGFYGNALGGTPNDCKRCPCPNDGACLQINEDTVICTECPKGYFGSRCE-------QCS 827
Query: 146 KNF--DPAGNRIWDLRRCKR-----DTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKCD 196
F DP G + +++ CK + P G CN + G C +C G+ CD
Sbjct: 828 DGFFGDPTG-LLGEVQTCKSCDCNGNVDPNAVGN-----CNRTTGECLKCIHNTAGEHCD 881
Query: 197 RCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
+C H+ C C C AG+ ++ CD V GQC+CK NV G C
Sbjct: 882 QCLSGHFGDPPALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDC 937
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 63/248 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL--DCQGDRDGPNCEKCRDNY----YQKSGD--- 51
C CNG +++C + HG L +C+ + DGP+C++C Y +++S
Sbjct: 299 CKCNGHASKCVPSTGM-----HGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEV 353
Query: 52 NFCTACNCNPIG-------SLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
N C ACNCN + +L + G C C+ G C+RC N Y + C +
Sbjct: 354 NECKACNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRDDGYCVN 413
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C C+P GS S Q +S G+ + V K RC
Sbjct: 414 CACDPVGS--------------RSLQCNSHGKCQCKPGVTGDK-----------CDRCDN 448
Query: 164 DTYPLG----------HGGSL--NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE--- 207
+ Y G GGS C++E G C CK V G +C+ C ++ +
Sbjct: 449 NYYQFGPHGCQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNR 508
Query: 208 AGCKSCEC 215
GC C C
Sbjct: 509 FGCTPCFC 516
>gi|195490762|ref|XP_002093277.1| laminin B2 [Drosophila yakuba]
gi|194179378|gb|EDW92989.1| laminin B2 [Drosophila yakuba]
Length = 1639
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG +++CFFD L+NRTGHGGHCLDC+ +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 359 CNCNGLADKCFFDAALFNRTGHGGHCLDCRENRDGPNCERCKENFYMRD-DGYCINCACD 417
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 418 PVGSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDIGGSQQNTPACDT 477
Query: 121 VKGQC 125
G C
Sbjct: 478 DTGIC 482
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 112/236 (47%), Gaps = 28/236 (11%)
Query: 27 LDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP-----IGSLNLQCNSEGRCQCKPGV 81
L+ GD + + + +Y S C CN + S + C+C+
Sbjct: 269 LNTFGDELFGDSQVLKSYFYAISDIAVGARCKCNGHASKCVASTGMHGERTLVCECRHNT 328
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC--ESAQLSSRGRVHTE 139
G CDRC + D S E N + NC+ + +C ++A + G H
Sbjct: 329 DGPDCDRCLPLYNDLKWKRSTSTEVNECKAC----NCNGLADKCFFDAALFNRTG--HGG 382
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------GSLNLQCNSEGRCQCKPG 189
+ R+N D + RCK + Y G GS +LQCNS G+CQCKPG
Sbjct: 383 HCLDCRENRDGP-----NCERCKENFYMRDDGYCINCACDPVGSRSLQCNSHGKCQCKPG 437
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+ G C CKDNVEG +C
Sbjct: 438 VTGDKCDRCDNNYYQFGPHGCQQCGCDIGGSQQNTPACDTDTGICFCKDNVEGRRC 493
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G +C +C+ Y+ N C C C+P+GS N C+ G+C C+PGV G +CD
Sbjct: 928 CKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCD 987
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C+ Y F GCK CEC+ +GS
Sbjct: 988 QCENFFYGFSSEGCKPCECDESGS 1011
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 105/252 (41%), Gaps = 61/252 (24%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKS----GD-NFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE+C D +Y GD C +C+CN N+ N+ G C
Sbjct: 811 CTECPKGYFGSRCEQCSDGFYGDPTGLLGDVQTCKSCDCNG----NVDPNAVGNCNRTTG 866
Query: 76 ---QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQC 125
+C G+ CD+C H+ C C C AG+ ++ CD V GQC
Sbjct: 867 ECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYDAGTEQDEQSITRCDQVTGQC 926
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSL 174
+ + + GR D C+ + + G GS
Sbjct: 927 Q-CKPNVIGR---------------------DCGECQPGYFNIRSGNGCENCLCDPVGSY 964
Query: 175 NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
N C+ G+C C+PGV G +CD+C+ Y F GCK CEC+ +GS CD GQ
Sbjct: 965 NSTCDRYSGQCHCRPGVMGQRCDQCENFFYGFSSEGCKPCECDESGS--KGFQCDQ-NGQ 1021
Query: 234 CECKDNVEGAQC 245
C C DNVEG +C
Sbjct: 1022 CPCNDNVEGRRC 1033
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 111/261 (42%), Gaps = 34/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C+C+G ++ C D E G C+ CQ + G NC++C +Y + N C C
Sbjct: 744 CDCHGHADIC--DSET-------GRCI-CQHNTHGDNCDQCAKGFYGNALGGTPNDCKRC 793
Query: 58 NCNPIGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPA 109
C P LQ N + +C G G +C++C Y G+ CKSC+CN
Sbjct: 794 PC-PNDGACLQINEDTVICTECPKGYFGSRCEQCSDGFYGDPTGLLGDVQTCKSCDCNGN 852
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR----DT 165
NC+ G+C ++ G H + + S DP RC R D
Sbjct: 853 VDPNAVGNCNRTTGECLKCIHNTAGE-HCD-QCLSGHFGDPLA---LPHGRCDRCSCYDA 907
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
S+ G+CQCKP V G C C +++ GC++C C+P GS +T
Sbjct: 908 GTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST 967
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQC C+ V G +C
Sbjct: 968 --CDRYSGQCHCRPGVMGQRC 986
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 42/205 (20%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN----- 66
NRT G CL C + G +C++C ++ GD C C+C G+
Sbjct: 862 NRTT--GECLKCIHNTAGEHCDQCLSGHF---GDPLALPHGRCDRCSCYDAGTEQDEQSI 916
Query: 67 LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
+C+ G+CQCKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 917 TRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--CDRYSGQ 974
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-----RRCKRDTYPLGHGGSLNLQCN 179
C H V ++ D N + + C+ D GS QC+
Sbjct: 975 C-----------HCRPGVMGQR-CDQCENFFYGFSSEGCKPCECD-----ESGSKGFQCD 1017
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G +CDRC N YD
Sbjct: 1018 QNGQCPCNDNVEGRRCDRCKENKYD 1042
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 91/236 (38%), Gaps = 41/236 (17%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE C Y G F C C+C+ + C+SE GRC C+ GD CD+C
Sbjct: 718 GQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADI---CDSETGRCICQHNTHGDNCDQC 774
Query: 90 DVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
Y G CK C C G+ + +C SR Q
Sbjct: 775 AKGFYGNALGGTPNDCKRCPCPNDGACLQINEDTVICTECPKGYFGSRCE-------QCS 827
Query: 146 KNF--DPAGNRIWDLRRCKR-----DTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKCD 196
F DP G + D++ CK + P G CN + G C +C G+ CD
Sbjct: 828 DGFYGDPTG-LLGDVQTCKSCDCNGNVDPNAVGN-----CNRTTGECLKCIHNTAGEHCD 881
Query: 197 RCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
+C H+ C C C AG+ ++ CD V GQC+CK NV G C
Sbjct: 882 QCLSGHFGDPLALPHGRCDRCSCYDAGTEQDEQSITRCDQVTGQCQCKPNVIGRDC 937
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 98/248 (39%), Gaps = 63/248 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL--DCQGDRDGPNCEKCRDNY----YQKSGD--- 51
C CNG +++C + HG L +C+ + DGP+C++C Y +++S
Sbjct: 299 CKCNGHASKCVASTGM-----HGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEV 353
Query: 52 NFCTACNCNPIG-------SLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
N C ACNCN + +L + G C C+ G C+RC N Y + C +
Sbjct: 354 NECKACNCNGLADKCFFDAALFNRTGHGGHCLDCRENRDGPNCERCKENFYMRDDGYCIN 413
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C C+P GS S Q +S G+ + V K RC
Sbjct: 414 CACDPVGS--------------RSLQCNSHGKCQCKPGVTGDK-----------CDRCDN 448
Query: 164 DTYPLG----------HGGSL--NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
+ Y G GGS C+++ G C CK V G +C+ C ++ +
Sbjct: 449 NYYQFGPHGCQQCGCDIGGSQQNTPACDTDTGICFCKDNVEGRRCNECKPGFFNLDKTNR 508
Query: 209 -GCKSCEC 215
GC C C
Sbjct: 509 FGCTPCFC 516
>gi|226113|prf||1410326A laminin B2
Length = 1296
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG +++CFFD L+NRTGHGGHCLDC+ +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 16 CNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRD-DFYCVNCACD 74
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 75 PVGSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDT 134
Query: 121 VKGQC 125
G C
Sbjct: 135 ETGIC 139
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 57/74 (77%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 77 GSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDTET 136
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 137 GICFCKENVEGRRC 150
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G +C +C+ Y+ N C C C+P+GS N C+ G+C C+PGV G +CD
Sbjct: 585 CKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCD 644
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C+ Y F GCK CEC+ +GS
Sbjct: 645 QCENYFYGFSSEGCKPCECDESGS 668
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 105/255 (41%), Gaps = 67/255 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
C +C G CE+C D ++ GD C +C+CN N+ N+ G C
Sbjct: 468 CTECPKGYFGSRCEQCSDGFF---GDPTGLLGEVQTCKSCDCNG----NVDPNAVGNCNR 520
Query: 76 ------QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVK 122
+C G+ CD+C H+ C C C AG+ ++ CD V
Sbjct: 521 TTGECLKCIHNTAGEHCDQCLSGHFGDPPALPHGRCDRCSCYEAGTEQDEQSITRCDQVT 580
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------- 171
GQC+ + + GR D C+ + + G
Sbjct: 581 GQCQ-CKPNVIGR---------------------DCGECQPGYFNIRSGNGCENCLCDPV 618
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS N C+ G+C C+PGV G +CD+C+ Y F GCK CEC+ +GS CD
Sbjct: 619 GSYNSTCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSEGCKPCECDESGS--KGFQCDQ- 675
Query: 231 KGQCECKDNVEGAQC 245
GQC C DNVEG +C
Sbjct: 676 NGQCPCNDNVEGRRC 690
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 109/261 (41%), Gaps = 34/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C+C+G ++ C G C+ CQ + G NC++C +Y + N C C
Sbjct: 401 CDCHGHADIC---------DSETGRCI-CQHNTHGDNCDQCAKGFYGNALGGTPNDCKRC 450
Query: 58 NCNPIGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPA 109
C P LQ N + +C G G +C++C + GE CKSC+CN
Sbjct: 451 PC-PNDGACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTGLLGEVQTCKSCDCNGN 509
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
NC+ G+C ++ G H + + PA RC R Y
Sbjct: 510 VDPNAVGNCNRTTGECLKCIHNTAGE-HCDQCLSGHFGDPPA----LPHGRCDRCSCYEA 564
Query: 169 G---HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G S+ G+CQCKP V G C C +++ GC++C C+P GS +T
Sbjct: 565 GTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST 624
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQC C+ V G +C
Sbjct: 625 --CDRYSGQCHCRPGVMGQRC 643
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 42/205 (20%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD------NFCTACNCNPIGSLN----- 66
NRT G CL C + G +C++C ++ GD C C+C G+
Sbjct: 519 NRTT--GECLKCIHNTAGEHCDQCLSGHF---GDPPALPHGRCDRCSCYEAGTEQDEQSI 573
Query: 67 LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
+C+ G+CQCKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 574 TRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--CDRYSGQ 631
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-----RRCKRDTYPLGHGGSLNLQCN 179
C H V ++ D N + + C+ D GS QC+
Sbjct: 632 C-----------HCRPGVMGQR-CDQCENYFYGFSSEGCKPCECD-----ESGSKGFQCD 674
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G +CDRC N YD
Sbjct: 675 QNGQCPCNDNVEGRRCDRCKENKYD 699
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 84/213 (39%), Gaps = 37/213 (17%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNP 108
C C+C+ + C+SE GRC C+ GD CD+C Y G CK C C
Sbjct: 398 CIPCDCHGHADI---CDSETGRCICQHNTHGDNCDQCAKGFYGNALGGTPNDCKRCPCPN 454
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKR--- 163
G+ + +C SR Q F DP G + +++ CK
Sbjct: 455 DGACLQINEDTVICTECPKGYFGSRCE-------QCSDGFFGDPTG-LLGEVQTCKSCDC 506
Query: 164 --DTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCEC 215
+ P G CN + G C +C G+ CD+C H+ C C C
Sbjct: 507 NGNVDPNAVGN-----CNRTTGECLKCIHNTAGEHCDQCLSGHFGDPPALPHGRCDRCSC 561
Query: 216 NPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
AG+ ++ CD V GQC+CK NV G C
Sbjct: 562 YEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDC 594
>gi|194868030|ref|XP_001972200.1| laminin B2 [Drosophila erecta]
gi|190653983|gb|EDV51226.1| laminin B2 [Drosophila erecta]
Length = 1639
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG +++CFFD L+NRTGHGGHCLDC+ +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 359 CNCNGLADKCFFDASLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRD-DGYCVNCACD 417
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 418 PVGSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHENTPACDT 477
Query: 121 VKGQC 125
G C
Sbjct: 478 DTGIC 482
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 57/74 (77%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 420 GSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHENTPACDTDT 479
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 480 GICFCKENVEGRRC 493
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G +C +C+ Y+ N C C C+P+GS N C+ G+C C+PGV G +CD
Sbjct: 928 CKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCD 987
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C+ Y F GCK CEC+ +GS
Sbjct: 988 QCENYFYGFSSEGCKPCECDESGS 1011
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 105/252 (41%), Gaps = 61/252 (24%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKS----GD-NFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE+C D ++ GD C +C+CN N+ N+ G C
Sbjct: 811 CTECPKGYFGSRCEQCSDGFFGDPTGLLGDAQTCKSCDCNG----NVDPNAVGNCNRTTG 866
Query: 76 ---QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQC 125
+C G+ CD+C H+ C C C AG+ ++ CD V GQC
Sbjct: 867 ECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYAAGTEQDEQSITRCDQVTGQC 926
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSL 174
+ + + GR D C+ + + G GS
Sbjct: 927 Q-CKPNVIGR---------------------DCGECQPGYFNIRSGNGCENCLCDPVGSY 964
Query: 175 NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
N C+ G+C C+PGV G +CD+C+ Y F GCK CEC+ +GS CD GQ
Sbjct: 965 NSTCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSEGCKPCECDESGS--KGFQCDQ-NGQ 1021
Query: 234 CECKDNVEGAQC 245
C C DNVEG +C
Sbjct: 1022 CPCNDNVEGRRC 1033
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 42/205 (20%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN----- 66
NRT G CL C + G +C++C ++ GD C C+C G+
Sbjct: 862 NRTT--GECLKCIHNTAGEHCDQCLSGHF---GDPLALPHGRCDRCSCYAAGTEQDEQSI 916
Query: 67 LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
+C+ G+CQCKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 917 TRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--CDRYSGQ 974
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-----RRCKRDTYPLGHGGSLNLQCN 179
C H V ++ D N + + C+ D GS QC+
Sbjct: 975 C-----------HCRPGVMGQR-CDQCENYFYGFSSEGCKPCECD-----ESGSKGFQCD 1017
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G +CDRC N YD
Sbjct: 1018 QNGQCPCNDNVEGRRCDRCKENKYD 1042
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 95/248 (38%), Gaps = 63/248 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL--DCQGDRDGPNCEKCRDNY----YQKSGD--- 51
C CNG +++C + HG L +C+ + DGP+C++C Y +++S
Sbjct: 299 CKCNGHASKCVPSTGM-----HGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEV 353
Query: 52 NFCTACNCNPIG-------SLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
N C ACNCN + SL + G C C+ G C+RC N Y + C +
Sbjct: 354 NECKACNCNGLADKCFFDASLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRDDGYCVN 413
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C C+P GS S Q +S G+ + V K RC
Sbjct: 414 CACDPVGS--------------RSLQCNSHGKCQCKPGVTGDK-----------CDRCDN 448
Query: 164 DTYPLGHGGSLNLQCNS-------------EGRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
+ Y G G C+S G C CK V G +C+ C ++ +
Sbjct: 449 NYYQFGPHGCQQCGCDSGGSHENTPACDTDTGICFCKENVEGRRCNECKPGFFNLDKTNR 508
Query: 209 -GCKSCEC 215
GC C C
Sbjct: 509 FGCTPCFC 516
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 90/236 (38%), Gaps = 41/236 (17%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE C Y G F C C+C+ + C+SE GRC C+ GD CD+C
Sbjct: 718 GQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADI---CDSETGRCICQHNTHGDNCDQC 774
Query: 90 DVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
Y G CK C C G+ + +C SR Q
Sbjct: 775 AKGFYGNALGGTPSDCKRCPCPNDGACLQINEDTVICTECPKGYFGSRCE-------QCS 827
Query: 146 KNF--DPAGNRIWDLRRCKR-----DTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKCD 196
F DP G + D + CK + P G CN + G C +C G+ CD
Sbjct: 828 DGFFGDPTG-LLGDAQTCKSCDCNGNVDPNAVGN-----CNRTTGECLKCIHNTAGEHCD 881
Query: 197 RCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
+C H+ C C C AG+ ++ CD V GQC+CK NV G C
Sbjct: 882 QCLSGHFGDPLALPHGRCDRCSCYAAGTEQDEQSITRCDQVTGQCQCKPNVIGRDC 937
>gi|194747760|ref|XP_001956319.1| GF25144 [Drosophila ananassae]
gi|190623601|gb|EDV39125.1| GF25144 [Drosophila ananassae]
Length = 1640
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG +++CFFD L+N TGHGGHCLDC+ +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 359 CNCNGLADKCFFDAHLFNLTGHGGHCLDCRENRDGPNCERCKENFYMRE-DGYCVNCACD 417
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GS +LQCNS+G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 418 PTGSRSLQCNSQGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQPCGCDSRGSHENTPACDA 477
Query: 121 VKGQC 125
V G C
Sbjct: 478 VTGIC 482
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNS+G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+V
Sbjct: 420 GSRSLQCNSQGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQPCGCDSRGSHENTPACDAVT 479
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 480 GICICKENVEGRRC 493
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ + G +C +C+ Y+ N C C C+P+GS N C+ G+C C+PGV G KCD
Sbjct: 929 CKPNVIGKDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRHTGQCHCRPGVVGKKCD 988
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C Y F GC CEC+ +GS
Sbjct: 989 QCANYFYGFSNEGCLPCECDESGS 1012
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 98/252 (38%), Gaps = 61/252 (24%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE+C D ++ C +C+CN N+ N+ G C
Sbjct: 812 CTECPVGYFGSRCEQCSDGFFGDPTGLLGAVQTCKSCDCNG----NVDPNAVGNCNRTTG 867
Query: 76 ---QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQC 125
+C G+ CD C H+ C C C AG+ ++ CD V GQC
Sbjct: 868 ECLKCIHNTAGEHCDLCLPGHFGDPLALPHGSCDRCSCYEAGTEQDEQSISRCDQVTGQC 927
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSL 174
Q + N D C+ + + G GS
Sbjct: 928 -----------------QCKPNVIGK-----DCGECQPGYFNIRSGNGCENCLCDPVGSY 965
Query: 175 NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
N C+ G+C C+PGV G KCD+C Y F GC CEC+ +GS CD GQ
Sbjct: 966 NSTCDRHTGQCHCRPGVVGKKCDQCANYFYGFSNEGCLPCECDESGS--KGFQCDQY-GQ 1022
Query: 234 CECKDNVEGAQC 245
C C DNVEG +C
Sbjct: 1023 CPCNDNVEGRRC 1034
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 85/205 (41%), Gaps = 42/205 (20%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIG------SL 65
NRT G CL C + G +C+ C ++ GD C C+C G S+
Sbjct: 863 NRTT--GECLKCIHNTAGEHCDLCLPGHF---GDPLALPHGSCDRCSCYEAGTEQDEQSI 917
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
+ G+CQCKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 918 SRCDQVTGQCQCKPNVIGKDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--CDRHTGQ 975
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR-----CKRDTYPLGHGGSLNLQCN 179
C H V +K D N + C+ D GS QC+
Sbjct: 976 C-----------HCRPGVVGKK-CDQCANYFYGFSNEGCLPCECD-----ESGSKGFQCD 1018
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G +CDRC N YD
Sbjct: 1019 QYGQCPCNDNVEGRRCDRCKENKYD 1043
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 32/260 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTAC 57
C+C+G ++ C D E G C+ CQ + G NC++C +Y + G + C C
Sbjct: 745 CDCHGHADIC--DSET-------GRCI-CQHNTHGDNCDQCAKGFYGNALGGTPYDCKRC 794
Query: 58 NCNPIGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPA 109
C G+ LQ N + +C G G +C++C + G G CKSC+CN
Sbjct: 795 PCPNEGAC-LQINGDTVICTECPVGYFGSRCEQCSDGFFGDPTGLLGAVQTCKSCDCNGN 853
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
NC+ G+C ++ G H +L + DP RC Y G
Sbjct: 854 VDPNAVGNCNRTTGECLKCIHNTAGE-HCDLCLPGHFG-DPLALPHGSCDRCS--CYEAG 909
Query: 170 H---GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 225
S++ G+CQCKP V G C C +++ GC++C C+P GS +T
Sbjct: 910 TEQDEQSISRCDQVTGQCQCKPNVIGKDCGECQPGYFNIRSGNGCENCLCDPVGSYNST- 968
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD GQC C+ V G +C
Sbjct: 969 -CDRHTGQCHCRPGVVGKKC 987
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 17 YNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
YN T H G C C+ G C++C + +Y S + C C C+ GS QC+ G+
Sbjct: 965 YNSTCDRHTGQC-HCRPGVVGKKCDQCANYFYGFSNEG-CLPCECDESGSKGFQCDQYGQ 1022
Query: 75 CQCKPGVTGDKCDRCDVNHYD 95
C C V G +CDRC N YD
Sbjct: 1023 CPCNDNVEGRRCDRCKENKYD 1043
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 93/246 (37%), Gaps = 59/246 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSGD---NF 53
C CNG +++C ++ G +C+ + DGP+C++C Y ++++ N
Sbjct: 299 CKCNGHASKCVASTGMH---GERNLVCECRHNTDGPDCDRCLPLYNDVKWKRATSTEVNE 355
Query: 54 CTACNCNPIGS--------LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
C ACNCN + NL + C+ G C+RC N Y + C +C
Sbjct: 356 CKACNCNGLADKCFFDAHLFNLTGHGGHCLDCRENRDGPNCERCKENFYMREDGYCVNCA 415
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+P GS S Q +S+G+ + V K RC +
Sbjct: 416 CDPTGS--------------RSLQCNSQGKCQCKPGVTGDK-----------CDRCDNNY 450
Query: 166 YPLGHGGSLNLQCNSEGR-------------CQCKPGVTGDKCDRCDVNHYDFGEA---G 209
Y G G C+S G C CK V G +C+ C ++ + G
Sbjct: 451 YQFGPHGCQPCGCDSRGSHENTPACDAVTGICICKENVEGRRCNECKPGFFNLDKINRFG 510
Query: 210 CKSCEC 215
C C C
Sbjct: 511 CTPCFC 516
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE C Y G F C C+C+ + C+SE GRC C+ GD CD+C
Sbjct: 719 GQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADI---CDSETGRCICQHNTHGDNCDQC 775
Query: 90 DVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQS 144
Y G CK C C G+ N D+V +C SR Q
Sbjct: 776 AKGFYGNALGGTPYDCKRCPCPNEGACLQI-NGDTVICTECPVGYFGSRCE-------QC 827
Query: 145 RKNF--DPAGNRIWDLRRCKR-----DTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKC 195
F DP G + ++ CK + P G CN + G C +C G+ C
Sbjct: 828 SDGFFGDPTG-LLGAVQTCKSCDCNGNVDPNAVGN-----CNRTTGECLKCIHNTAGEHC 881
Query: 196 DRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
D C H+ C C C AG+ ++ CD V GQC+CK NV G C
Sbjct: 882 DLCLPGHFGDPLALPHGSCDRCSCYEAGTEQDEQSISRCDQVTGQCQCKPNVIGKDC 938
>gi|195326389|ref|XP_002029911.1| LanB2 [Drosophila sechellia]
gi|194118854|gb|EDW40897.1| LanB2 [Drosophila sechellia]
Length = 1639
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG +++CFFD L+NRTGHGGHCLDC+ +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 359 CNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRD-DGYCVNCACD 417
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCNS+G+CQCKPGVTGD CDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 418 PVGSRSLQCNSQGKCQCKPGVTGDMCDRCDNNYYQFGPHGCQQCGCDTGGSHQNTPACDT 477
Query: 121 VKGQC 125
G C
Sbjct: 478 ETGIC 482
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 57/74 (77%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNS+G+CQCKPGVTGD CDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 420 GSRSLQCNSQGKCQCKPGVTGDMCDRCDNNYYQFGPHGCQQCGCDTGGSHQNTPACDTET 479
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 480 GICFCKENVEGRRC 493
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G +C +C+ Y+ N C C C+P+GS N C+ G+C C+PGV G +CD
Sbjct: 928 CKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCD 987
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C+ Y F GCK CEC+ +GS
Sbjct: 988 QCENYFYGFSSEGCKPCECDESGS 1011
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 105/255 (41%), Gaps = 67/255 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
C +C G CE+C D ++ GD C +C+CN N+ N+ G C
Sbjct: 811 CTECPKGYFGSRCEQCSDGFF---GDPTGLLGEVQTCKSCDCNG----NVDPNAVGNCNR 863
Query: 76 ------QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVK 122
+C G+ CD+C H+ C C C AG+ ++ CD V
Sbjct: 864 TTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVT 923
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------- 171
GQC+ + + GR D C+ + + G
Sbjct: 924 GQCQ-CKPNVIGR---------------------DCGECQPGYFNIRSGNGCENCLCDPV 961
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS N C+ G+C C+PGV G +CD+C+ Y F GCK CEC+ +GS CD
Sbjct: 962 GSYNSTCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSEGCKPCECDESGS--KGFQCDQ- 1018
Query: 231 KGQCECKDNVEGAQC 245
GQC C DNVEG +C
Sbjct: 1019 NGQCPCNDNVEGRRC 1033
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 42/205 (20%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN----- 66
NRT G CL C + G +C++C ++ GD C C+C G+
Sbjct: 862 NRTT--GECLKCIHNTAGEHCDQCLSGHF---GDPLALPHGRCDRCSCYEAGTEQDEQSI 916
Query: 67 LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
+C+ G+CQCKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 917 TRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--CDRYSGQ 974
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-----RRCKRDTYPLGHGGSLNLQCN 179
C H V ++ D N + + C+ D GS QC+
Sbjct: 975 C-----------HCRPGVMGQR-CDQCENYFYGFSSEGCKPCECD-----ESGSKGFQCD 1017
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G +CDRC N YD
Sbjct: 1018 QNGQCPCNDNVEGRRCDRCKENKYD 1042
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 112/261 (42%), Gaps = 34/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C+C+G ++ C D E G C+ CQ + G NC++C +Y + N C C
Sbjct: 744 CDCHGHADIC--DSET-------GRCI-CQHNTHGDNCDQCAKGFYGNALGGTPNDCKRC 793
Query: 58 NCNPIGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPA 109
C P LQ N + +C G G +C++C + GE CKSC+CN
Sbjct: 794 PC-PNDGACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTGLLGEVQTCKSCDCNGN 852
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
NC+ G+C ++ G H + + S DP RC R Y
Sbjct: 853 VDPNAVGNCNRTTGECLKCIHNTAGE-HCD-QCLSGHFGDPLA---LPHGRCDRCSCYEA 907
Query: 169 GH---GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G S+ G+CQCKP V G C C +++ GC++C C+P GS +T
Sbjct: 908 GTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST 967
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQC C+ V G +C
Sbjct: 968 --CDRYSGQCHCRPGVMGQRC 986
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 91/236 (38%), Gaps = 41/236 (17%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE C Y G F C C+C+ + C+SE GRC C+ GD CD+C
Sbjct: 718 GQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADI---CDSETGRCICQHNTHGDNCDQC 774
Query: 90 DVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
Y G CK C C G+ + +C SR Q
Sbjct: 775 AKGFYGNALGGTPNDCKRCPCPNDGACLQINEDTVICTECPKGYFGSRCE-------QCS 827
Query: 146 KNF--DPAGNRIWDLRRCKR-----DTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKCD 196
F DP G + +++ CK + P G CN + G C +C G+ CD
Sbjct: 828 DGFFGDPTG-LLGEVQTCKSCDCNGNVDPNAVGN-----CNRTTGECLKCIHNTAGEHCD 881
Query: 197 RCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
+C H+ C C C AG+ ++ CD V GQC+CK NV G C
Sbjct: 882 QCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDC 937
>gi|195376995|ref|XP_002047278.1| GJ12023 [Drosophila virilis]
gi|194154436|gb|EDW69620.1| GJ12023 [Drosophila virilis]
Length = 1641
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNGF+++C+FD L+N+TGHGGHCLDC+ +RDGPNCE+C++N+Y + + +C C C+
Sbjct: 360 CNCNGFADKCYFDANLFNQTGHGGHCLDCRDNRDGPNCERCKENFYMRD-NAYCINCGCD 418
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCNS+G+CQCKPGVTGDKCDRC N++ FG GC+ C C+P GS NTP CD+
Sbjct: 419 PVGSRSLQCNSQGKCQCKPGVTGDKCDRCANNYFQFGPHGCQPCGCDPRGSHDNTPACDA 478
Query: 121 VKGQC 125
G C
Sbjct: 479 ESGIC 483
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 57/74 (77%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNS+G+CQCKPGVTGDKCDRC N++ FG GC+ C C+P GS NTP CD+
Sbjct: 421 GSRSLQCNSQGKCQCKPGVTGDKCDRCANNYFQFGPHGCQPCGCDPRGSHDNTPACDAES 480
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 481 GICFCKENVEGRRC 494
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 104/255 (40%), Gaps = 67/255 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
C +C G CE+C D +Y GD C +C+CN N+ N+ G C
Sbjct: 813 CTECPVGYFGSRCEQCSDGFY---GDPTGLLGEVQTCKSCDCNG----NVDPNAVGNCNR 865
Query: 76 ------QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVK 122
+C G+ CD+C H+ C C C AG+ ++ CD V
Sbjct: 866 TSGECLKCIHNTAGEHCDQCLPGHFGDPLALPHGKCDRCSCYAAGTEQDEQSISRCDQVT 925
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------- 171
GQC+ + + GR D C+ + + G
Sbjct: 926 GQCQ-CKPNVIGR---------------------DCGECQPGYFNIRSGNGCENCLCDPV 963
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS N C+ G+C CKPGV G +CD+C + F GCK CEC+ +GS CD
Sbjct: 964 GSYNSTCDRYTGQCHCKPGVVGVRCDQCANYFFGFSVEGCKPCECDESGS--KGFQCDQ- 1020
Query: 231 KGQCECKDNVEGAQC 245
GQC C DNVEG +C
Sbjct: 1021 NGQCPCNDNVEGRRC 1035
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 86/200 (43%), Gaps = 32/200 (16%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIG------SL 65
NRT G CL C + G +C++C ++ GD C C+C G S+
Sbjct: 864 NRTS--GECLKCIHNTAGEHCDQCLPGHF---GDPLALPHGKCDRCSCYAAGTEQDEQSI 918
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
+ G+CQCKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 919 SRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--CDRYTGQ 976
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC 184
C G V + F G + + C+ D GS QC+ G+C
Sbjct: 977 CHCKP----GVVGVRCDQCANYFF---GFSVEGCKPCECD-----ESGSKGFQCDQNGQC 1024
Query: 185 QCKPGVTGDKCDRCDVNHYD 204
C V G +CDRC N YD
Sbjct: 1025 PCNDNVEGRRCDRCKENKYD 1044
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 101/248 (40%), Gaps = 63/248 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL--DCQGDRDGPNCEKCRDNY----YQKSGD--- 51
C CNG +++C + HG L +C+ + DGP+C++C Y ++++
Sbjct: 300 CKCNGHASKCVASTGM-----HGERTLVCECRHNTDGPDCDRCLPLYNDVKWKRATSTEV 354
Query: 52 NFCTACNCNPIG-------SLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
N C ACNCN +L Q G C C+ G C+RC N Y A C +
Sbjct: 355 NECKACNCNGFADKCYFDANLFNQTGHGGHCLDCRDNRDGPNCERCKENFYMRDNAYCIN 414
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C C+P GS S Q +S+G+ + V K RC
Sbjct: 415 CGCDPVGS--------------RSLQCNSQGKCQCKPGVTGDK-----------CDRCAN 449
Query: 164 DTYPLG-HG---------GSLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
+ + G HG GS + C++E G C CK V G +C+ C ++ ++
Sbjct: 450 NYFQFGPHGCQPCGCDPRGSHDNTPACDAESGICFCKENVEGRRCNECKPGFFNLDKSNR 509
Query: 209 -GCKSCEC 215
GC C C
Sbjct: 510 FGCTPCFC 517
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 94/237 (39%), Gaps = 43/237 (18%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE C Y G F C C+C+ + C+SE G C C+ GD CD+C
Sbjct: 720 GQFCESCAPRYRHSPARGGPFMPCIPCDCHGHADI---CDSETGSCICQHNTQGDNCDQC 776
Query: 90 DVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQS 144
+Y G CK C C G+ N D+V +C SR Q
Sbjct: 777 AKGYYGNALGGTPYDCKRCPCPNDGACLQI-NGDTVICTECPVGYFGSRCE-------QC 828
Query: 145 RKNF--DPAGNRIWDLRRCKR-----DTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKC 195
F DP G + +++ CK + P G CN + G C +C G+ C
Sbjct: 829 SDGFYGDPTG-LLGEVQTCKSCDCNGNVDPNAVGN-----CNRTSGECLKCIHNTAGEHC 882
Query: 196 DRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
D+C H+ C C C AG+ ++ CD V GQC+CK NV G C
Sbjct: 883 DQCLPGHFGDPLALPHGKCDRCSCYAAGTEQDEQSISRCDQVTGQCQCKPNVIGRDC 939
>gi|125978184|ref|XP_001353125.1| GA17375 [Drosophila pseudoobscura pseudoobscura]
gi|195173420|ref|XP_002027489.1| GL10310 [Drosophila persimilis]
gi|54641876|gb|EAL30626.1| GA17375 [Drosophila pseudoobscura pseudoobscura]
gi|194114390|gb|EDW36433.1| GL10310 [Drosophila persimilis]
Length = 1637
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG +++CFFD L+N+TGHGGHCLDC+ +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 356 CNCNGLADKCFFDAHLFNQTGHGGHCLDCRENRDGPNCERCKENFYMRE-DGYCVNCGCD 414
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS +LQCNS+G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 415 SIGSRSLQCNSQGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQPCGCDGRGSHENTPACDA 474
Query: 121 VKGQC 125
G C
Sbjct: 475 ESGIC 479
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 117/268 (43%), Gaps = 96/268 (35%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL--DCQGDRDGPNCEKCRDNY----YQKSGD--- 51
C CNG +++C + HG L +C+ + DGP+C++C Y ++++
Sbjct: 296 CKCNGHASKCVASTGM-----HGERTLVCECRHNTDGPDCDRCLPLYNDVKWKRATSTEV 350
Query: 52 NFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECN 107
N C ACNCN + D+C + + F + G C C N
Sbjct: 351 NECKACNCNGLA-----------------------DKCFFDAHLFNQTGHGGHCLDCREN 387
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
G PNC+ RCK + Y
Sbjct: 388 RDG-----PNCE----------------------------------------RCKENFYM 402
Query: 168 LGHG----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
G GS +LQCNS+G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+
Sbjct: 403 REDGYCVNCGCDSIGSRSLQCNSQGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQPCGCDG 462
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS +NTP CD+ G C CK+NVEG +C
Sbjct: 463 RGSHENTPACDAESGICFCKENVEGRRC 490
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 104/255 (40%), Gaps = 67/255 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
C +C G CE+C D ++ GD CT C+CN N+ N+ G C
Sbjct: 809 CTECPVGYFGSRCEQCSDGFF---GDPTGLLGTVQTCTGCDCNG----NVDPNAVGNCNR 861
Query: 76 ------QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVK 122
+C G+ CD+C H+ C C C AG+ ++ CD V
Sbjct: 862 TTGECLKCIHNTAGEHCDQCLPGHFGDPLSLPHGKCDRCSCYEAGTEQDEQSISRCDQVT 921
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------- 171
GQC+ + + GR D C+ + + G
Sbjct: 922 GQCQ-CKPNVIGR---------------------DCGECQPGYFNIRSGNGCENCLCDPV 959
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS N C+ G+C CKPGV G +CD+C Y F GCK CEC+ +GS CD
Sbjct: 960 GSFNSTCDRYSGQCHCKPGVVGLRCDQCANYFYGFSSEGCKPCECDESGS--KGFQCDQ- 1016
Query: 231 KGQCECKDNVEGAQC 245
GQC C DNVEG +C
Sbjct: 1017 SGQCPCNDNVEGRRC 1031
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 87/205 (42%), Gaps = 42/205 (20%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIG------SL 65
NRT G CL C + G +C++C ++ GD C C+C G S+
Sbjct: 860 NRTT--GECLKCIHNTAGEHCDQCLPGHF---GDPLSLPHGKCDRCSCYEAGTEQDEQSI 914
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
+ G+CQCKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 915 SRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSFNST--CDRYSGQ 972
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-----RRCKRDTYPLGHGGSLNLQCN 179
C H + V + D N + + C+ D GS QC+
Sbjct: 973 C-----------HCKPGVVGLR-CDQCANYFYGFSSEGCKPCECD-----ESGSKGFQCD 1015
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G +CDRC N YD
Sbjct: 1016 QSGQCPCNDNVEGRRCDRCKENKYD 1040
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 89/237 (37%), Gaps = 43/237 (18%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE C Y G F C C+C+ + C+SE GRC C+ GD CD+C
Sbjct: 716 GQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADI---CDSETGRCICQHNTFGDNCDQC 772
Query: 90 DVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
Y G CK C C G+ + +C SR Q
Sbjct: 773 AKGFYGVALGGTPYDCKRCPCPNDGACLQINGDTVICTECPVGYFGSRCE-------QCS 825
Query: 146 KNF--DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC--------QCKPGVTGDKC 195
F DP G + ++ C G + N+ N+ G C +C G+ C
Sbjct: 826 DGFFGDPTG-LLGTVQTCT------GCDCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHC 878
Query: 196 DRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
D+C H+ C C C AG+ ++ CD V GQC+CK NV G C
Sbjct: 879 DQCLPGHFGDPLSLPHGKCDRCSCYEAGTEQDEQSISRCDQVTGQCQCKPNVIGRDC 935
>gi|195428901|ref|XP_002062504.1| GK16620 [Drosophila willistoni]
gi|194158589|gb|EDW73490.1| GK16620 [Drosophila willistoni]
Length = 1645
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG +++C+FD L+N TGHGGHCLDC+ +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 364 CNCNGLADKCYFDSHLFNLTGHGGHCLDCRENRDGPNCERCKENFYMRE-DGYCINCACD 422
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS NTP CD+
Sbjct: 423 PVGSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQPCGCDGRGSQDNTPACDA 482
Query: 121 VKGQC 125
G C
Sbjct: 483 ESGIC 487
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 56/74 (75%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS NTP CD+
Sbjct: 425 GSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQPCGCDGRGSQDNTPACDAES 484
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 485 GICFCKENVEGRRC 498
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 105/255 (41%), Gaps = 67/255 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
C +C G CE+C D +Y GD C +C+CN N+ N+ G C
Sbjct: 817 CTECPVGYFGSRCEQCSDGFY---GDPTGLLGFVQTCKSCDCNG----NVDPNAVGNCNR 869
Query: 76 ------QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVK 122
+C G+ CD+C H+ C C C AG+ ++ CD V
Sbjct: 870 TTGECLKCIHNTAGEHCDQCLPGHFGDPLALPHGKCDRCSCYAAGTEQDEQSISKCDQVT 929
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------- 171
GQC+ + + GR D C+ + + G
Sbjct: 930 GQCQ-CKPNVIGR---------------------DCGECQPGYFNIRSGNGCENCLCDPV 967
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS N C+ G+C CKPGV G +CD+C Y F GCKSC+C+ +GS CD
Sbjct: 968 GSYNATCDRYSGQCHCKPGVVGLRCDQCANYFYGFSPEGCKSCDCDESGS--KGFQCDQ- 1024
Query: 231 KGQCECKDNVEGAQC 245
GQC C DNVEG +C
Sbjct: 1025 NGQCPCNDNVEGRRC 1039
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 87/204 (42%), Gaps = 40/204 (19%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGS-LNLQCN 70
NRT G CL C + G +C++C ++ GD C C+C G+ + Q
Sbjct: 868 NRTT--GECLKCIHNTAGEHCDQCLPGHF---GDPLALPHGKCDRCSCYAAGTEQDEQSI 922
Query: 71 SE-----GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
S+ G+CQCKP V G C C +++ GC++C C+P GS T CD GQ
Sbjct: 923 SKCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNAT--CDRYSGQ 980
Query: 125 CESAQLSSRGRVHTELR----VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
C G V LR F P G + C D GS QC+
Sbjct: 981 CHC----KPGVVG--LRCDQCANYFYGFSPEG-----CKSCDCD-----ESGSKGFQCDQ 1024
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G +CDRC N YD
Sbjct: 1025 NGQCPCNDNVEGRRCDRCKENKYD 1048
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 99/248 (39%), Gaps = 63/248 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL--DCQGDRDGPNCEKCRDNY----YQKSGD--- 51
C CNG +++C + HG L +C+ + DGP+C++C Y ++++
Sbjct: 304 CKCNGHASKCVASTGM-----HGERTLVCECRHNTDGPDCDRCLPLYNDVKWKRATSTEV 358
Query: 52 NFCTACNCNPIGS--------LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
N C ACNCN + NL + C+ G C+RC N Y + C +
Sbjct: 359 NECKACNCNGLADKCYFDSHLFNLTGHGGHCLDCRENRDGPNCERCKENFYMREDGYCIN 418
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C C+P GS S Q +S G+ + V K RC
Sbjct: 419 CACDPVGS--------------RSLQCNSHGKCQCKPGVTGDK-----------CDRCDN 453
Query: 164 DTYPLG-HG---------GSLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
+ Y G HG GS + C++E G C CK V G +C+ C ++ ++
Sbjct: 454 NYYQFGPHGCQPCGCDGRGSQDNTPACDAESGICFCKENVEGRRCNECKPGFFNLDKSNR 513
Query: 209 -GCKSCEC 215
GC C C
Sbjct: 514 FGCTPCFC 521
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 87/214 (40%), Gaps = 39/214 (18%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNP 108
C C+C+ + C+SE GRC C+ GD CD+C +Y G CK C C
Sbjct: 747 CIPCDCHGHADI---CDSETGRCICQHNTFGDNCDQCAKGYYGNALGGTPYDCKRCPCPN 803
Query: 109 AGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKR-- 163
G+ N D+V +C SR Q F DP G + ++ CK
Sbjct: 804 DGACLQI-NGDTVICTECPVGYFGSRCE-------QCSDGFYGDPTG-LLGFVQTCKSCD 854
Query: 164 ---DTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCE 214
+ P G CN + G C +C G+ CD+C H+ C C
Sbjct: 855 CNGNVDPNAVGN-----CNRTTGECLKCIHNTAGEHCDQCLPGHFGDPLALPHGKCDRCS 909
Query: 215 CNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
C AG+ ++ CD V GQC+CK NV G C
Sbjct: 910 CYAAGTEQDEQSISKCDQVTGQCQCKPNVIGRDC 943
>gi|241626256|ref|XP_002409634.1| laminin gamma-1 chain, putative [Ixodes scapularis]
gi|215503204|gb|EEC12698.1| laminin gamma-1 chain, putative [Ixodes scapularis]
Length = 1278
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S +C+FDKELY+RTGHGGHC++C + DGPNCE+CR+N+YQ+S D C AC C+
Sbjct: 1 CNCNGRSRKCYFDKELYDRTGHGGHCINCSDNTDGPNCERCRENFYQRS-DGRCVACGCD 59
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS LQCNS+G+C CKPGV G +CDRC N YDF E GC+ C C+ AGSV + P+CD+
Sbjct: 60 PLGSRVLQCNSKGQCPCKPGVEGQRCDRCAPNFYDFSEQGCRPCGCSMAGSVDSPPSCDA 119
Query: 121 VKGQC 125
G C
Sbjct: 120 ATGVC 124
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 53/74 (71%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS LQCNS+G+C CKPGV G +CDRC N YDF E GC+ C C+ AGSV + P+CD+
Sbjct: 62 GSRVLQCNSKGQCPCKPGVEGQRCDRCAPNFYDFSEQGCRPCGCSMAGSVDSPPSCDAAT 121
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 122 GVCRCKANVEGRQC 135
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTA-------CNCNPIGSLNLQCNS-EGRC 75
G CL C G +CEKC +Y GD +GS + QC+ G+C
Sbjct: 507 GECLKCIYKTAGFHCEKCLPGHY---GDALAVPKGDCKRNMQLLSLGSTSDQCDPVTGQC 563
Query: 76 QCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C+P V G +C +C ++ G GC+ C C+ GSV T CD GQC
Sbjct: 564 PCRPNVAGRECGQCREGTWNLEGGQGCEQCGCHLVGSVNRT--CDQRTGQCHCRPGVGGK 621
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R L F P G C D+ GS++LQC +G+C+C+P V G +
Sbjct: 622 RCDQCLPYHY--GFSPDG-----CLPCDCDSL-----GSVSLQCAPDGQCECRPNVEGRR 669
Query: 195 CDRCDVNHYDFGEAGCKSC 213
C+RC N Y+ EAGC C
Sbjct: 670 CERCKENKYN-REAGCVDC 687
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS+N C+ G+C C+PGV G +CD+C HY F GC C+C+ GSV + C +
Sbjct: 599 GSVNRTCDQRTGQCHCRPGVGGKRCDQCLPYHYGFSPDGCLPCDCDSLGSV--SLQC-AP 655
Query: 231 KGQCECKDNVEGAQC 245
GQCEC+ NVEG +C
Sbjct: 656 DGQCECRPNVEGRRC 670
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 106/244 (43%), Gaps = 41/244 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNCNPIGSLNLQCNSEGRC-QCKP 79
GHC+ CQ + G CE+C +Y + C C C G+ + + C +C
Sbjct: 399 GHCI-CQHNTAGEFCERCAPRFYGNALVGSPEDCQPCPCPDQGACAVLPDESVVCLECPQ 457
Query: 80 GVTGDKCDRCDVNHY-----DFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G +G +CD C H+ +G E C+ C+CN NC++ G+C +
Sbjct: 458 GYSGGRCDLCFDGHFGDPQGRYGAERPCQKCDCNDNVDPNAVANCNTTTGECLKCIYKTA 517
Query: 134 GRVHTE----------LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EG 182
G H E L V P G+ CKR+ L G + + QC+ G
Sbjct: 518 G-FHCEKCLPGHYGDALAV-------PKGD-------CKRNMQLLSLGSTSD-QCDPVTG 561
Query: 183 RCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
+C C+P V G +C +C ++ G GC+ C C+ GSV T CD GQC C+ V
Sbjct: 562 QCPCRPNVAGRECGQCREGTWNLEGGQGCEQCGCHLVGSVNRT--CDQRTGQCHCRPGVG 619
Query: 242 GAQC 245
G +C
Sbjct: 620 GKRC 623
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C G C+RC N Y + C +C C+P GS C+S KGQC CK VEG +C
Sbjct: 29 CSDNTDGPNCERCRENFYQRSDGRCVACGCDPLGS--RVLQCNS-KGQCPCKPGVEGQRC 85
>gi|157109051|ref|XP_001650503.1| laminin gamma 1 chain [Aedes aegypti]
gi|108879155|gb|EAT43380.1| AAEL005187-PA [Aedes aegypti]
Length = 1624
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG+S +CFFD++LYN TGHGGHC++C +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 342 CNCNGYSTKCFFDRQLYNLTGHGGHCIECGANRDGPNCERCKENFYMRE-DGYCINCGCD 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS +LQCN+EG+CQCKPGVTG+KCDRC+ N Y+FG GC+ C C+ GS NTP+CD
Sbjct: 401 STGSRSLQCNAEGKCQCKPGVTGEKCDRCENNFYNFGPHGCQPCNCDVRGSFDNTPSCDP 460
Query: 121 VKGQC 125
G C
Sbjct: 461 NTGIC 465
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 111/258 (43%), Gaps = 74/258 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG ++ C + +G G CQ DGP+CEKC Y N
Sbjct: 282 CKCNGHASECITST---SNSGQRGRVCKCQHYTDGPDCEKCLPFY------------NDA 326
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRC--DVNHYDFGEAGCKSCECNPAGSVKNTPNC 118
P G + S+ +CKP +C D Y+ G EC G+ ++ PNC
Sbjct: 327 PWG----RATSKNVHECKPCNCNGYSTKCFFDRQLYNLTGHGGHCIEC---GANRDGPNC 379
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG------- 171
+ RCK + Y G
Sbjct: 380 E----------------------------------------RCKENFYMREDGYCINCGC 399
Query: 172 ---GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
GS +LQCN+EG+CQCKPGVTG+KCDRC+ N Y+FG GC+ C C+ GS NTP+CD
Sbjct: 400 DSTGSRSLQCNAEGKCQCKPGVTGEKCDRCENNFYNFGPHGCQPCNCDVRGSFDNTPSCD 459
Query: 229 SVKGQCECKDNVEGAQCR 246
G C CK+NVEG CR
Sbjct: 460 PNTGICACKENVEGRHCR 477
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 106/250 (42%), Gaps = 57/250 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
CL+C GP CE C D YY C +C+CN N+ N+ G C
Sbjct: 795 CLECPVGYFGPRCELCSDGYYGDPTGVHGAIRMCQSCDCNG----NVDPNAVGNCNRTTG 850
Query: 76 ---QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSV---KNTPNCDSVKGQC 125
+C G CD+C H+ C+ C C P G+ K CD G C
Sbjct: 851 ECLKCIHNTAGVHCDQCLPGHFGDPLALPHGNCEQCSCYPRGTEQTDKGISICDPNNGNC 910
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNL 176
+ + + GR N + N W++ G+G GS N
Sbjct: 911 Q-CKPNVIGR-----------NCNECKNGYWNIIS--------GNGCENCNCDPTGSFNS 950
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
CN+ G C CKPGV G KCD+C V HY F GC SC+C+P+GS CD GQC
Sbjct: 951 SCNTYTGECYCKPGVVGKKCDKCAVTHYGFSLEGCNSCDCDPSGS--KGSQCDQY-GQCP 1007
Query: 236 CKDNVEGAQC 245
C DNVEG +C
Sbjct: 1008 CNDNVEGRRC 1017
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGS------L 65
NRT G CL C + G +C++C ++ GD C C+C P G+ +
Sbjct: 846 NRTT--GECLKCIHNTAGVHCDQCLPGHF---GDPLALPHGNCEQCSCYPRGTEQTDKGI 900
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
++ + G CQCKP V G C+ C +++ GC++C C+P GS ++ C++ G+
Sbjct: 901 SICDPNNGNCQCKPNVIGRNCNECKNGYWNIISGNGCENCNCDPTGSFNSS--CNTYTGE 958
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGR 183
C G V + + ++ + L C D P G GS QC+ G+
Sbjct: 959 C----YCKPGVVGKKCDKCAVTHYG------FSLEGCNSCDCDPSGSKGS---QCDQYGQ 1005
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
C C V G +CDRC N YD + GC C
Sbjct: 1006 CPCNDNVEGRRCDRCKENKYDRHQ-GCLDC 1034
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 23/237 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTACNCNPIGSLNLQCNSEGRC-QCKP 79
G C+ CQ + G C++C YY + G + C C C G+ + C +C
Sbjct: 742 GRCI-CQHNTAGDTCDQCAKGYYGNALGGTPYDCKRCPCPNNGACMQMADESVICLECPV 800
Query: 80 GVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G G +C+ C +Y G G C+SC+CN NC+ G+C ++
Sbjct: 801 GYFGPRCELCSDGYYGDPTGVHGAIRMCQSCDCNGNVDPNAVGNCNRTTGECLKCIHNTA 860
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHGGSLNLQCN-SEGRCQCKPG 189
G VH + + DP + +C R T G S+ C+ + G CQCKP
Sbjct: 861 G-VHCDQCLPGHFG-DPLALPHGNCEQCSCYPRGTEQTDKGISI---CDPNNGNCQCKPN 915
Query: 190 VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C+ C +++ GC++C C+P GS ++ C++ G+C CK V G +C
Sbjct: 916 VIGRNCNECKNGYWNIISGNGCENCNCDPTGSFNSS--CNTYTGECYCKPGVVGKKC 970
>gi|405963229|gb|EKC28820.1| Laminin subunit gamma-1 [Crassostrea gigas]
Length = 1645
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 96/125 (76%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN ++RC+FD++LY TG GGHC+DC+ + DGP+CE+C+DN+Y K D CT C+CN
Sbjct: 360 CECNNKADRCYFDEDLYQTTGRGGHCIDCRDNTDGPHCERCKDNHYLKPDDRRCTPCDCN 419
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GS NLQC++ GRCQCKPGV GDKCDRC+ N++DFG+AGC+ C CNP GS+ N C+
Sbjct: 420 PTGSENLQCDAGGRCQCKPGVAGDKCDRCENNYFDFGQAGCRPCGCNPIGSLDNFARCNP 479
Query: 121 VKGQC 125
V G C
Sbjct: 480 VDGTC 484
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 57/74 (77%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS NLQC++ GRCQCKPGV GDKCDRC+ N++DFG+AGC+ C CNP GS+ N C+ V
Sbjct: 422 GSENLQCDAGGRCQCKPGVAGDKCDRCENNYFDFGQAGCRPCGCNPIGSLDNFARCNPVD 481
Query: 232 GQCECKDNVEGAQC 245
G C CK+NV+G C
Sbjct: 482 GTCMCKENVDGRTC 495
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 96/211 (45%), Gaps = 49/211 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGS--LN-LQCNSE-G 73
G CL C + DG CEKC +YY GD CTACNC P G+ +N L C+ + G
Sbjct: 872 GECLKCIYNTDGFYCEKCLPDYY---GDALAMPKGNCTACNCYPPGTQPINGLSCDPKNG 928
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
+C C+ V G +CD C+ +++ GC+ C C+ GS+ N CD V GQC+
Sbjct: 929 QCTCQDHVVGLQCDTCEAGYWNINTGTGCEDCYCDVMGSLSNV--CDQVTGQCQCR---- 982
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSEG 182
G +C+ + Y + G S++LQC++ G
Sbjct: 983 ------------------PGVTGLKCDQCQPNHYGFSNTGCTACNCDPEGSVSLQCDTNG 1024
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
C C+ + G CDRC N Y+ AGC C
Sbjct: 1025 NCPCRTNIEGQHCDRCMENKYNI-TAGCIEC 1054
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G+CQC+PGVTG KCD+C NHY F GC +C C+P GSV + CD+
Sbjct: 966 GSLSNVCDQVTGQCQCRPGVTGLKCDQCQPNHYGFSNTGCTACNCDPEGSV--SLQCDT- 1022
Query: 231 KGQCECKDNVEGAQC 245
G C C+ N+EG C
Sbjct: 1023 NGNCPCRTNIEGQHC 1037
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 111/263 (42%), Gaps = 37/263 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTAC 57
C C G S+ C D G C+ CQ + +G CE+C YY K+G F C C
Sbjct: 747 CQCFGHSDSCDPD---------SGRCI-CQHNTEGDFCERCISGYYGNPKNGSEFDCKPC 796
Query: 58 NCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG---------CKSCECN 107
C G N + C CK G G+ CD C ++ + G C+ C CN
Sbjct: 797 PCPDGGPCAQLHNGDVVCTDCKEGHGGNLCDICLDGYHGNPKGGPGIHQDYQACQKCSCN 856
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN--FDPAGNRIWDLRRCKR-D 164
NCDS G+C ++ G + + P GN C +
Sbjct: 857 DNIDPNAIRNCDSKTGECLKCIYNTDGFYCEKCLPDYYGDALAMPKGN-------CTACN 909
Query: 165 TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVK 222
YP G L C+ + G+C C+ V G +CD C+ +++ GC+ C C+ GS+
Sbjct: 910 CYPPGTQPINGLSCDPKNGQCTCQDHVVGLQCDTCEAGYWNINTGTGCEDCYCDVMGSLS 969
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
N CD V GQC+C+ V G +C
Sbjct: 970 NV--CDQVTGQCQCRPGVTGLKC 990
>gi|195127057|ref|XP_002007985.1| GI13252 [Drosophila mojavensis]
gi|193919594|gb|EDW18461.1| GI13252 [Drosophila mojavensis]
Length = 1641
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN F+++C+FD L+N TGHGGHCLDC+ +RDGPNCE+C++N+Y + + +C C C+
Sbjct: 360 CNCNNFADKCYFDANLFNLTGHGGHCLDCRDNRDGPNCERCKENFYMRD-NAYCVNCACD 418
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCNS+G+CQCKPGVTGDKCDRC N + FG GC+ C C+P GS NTP CD+
Sbjct: 419 PVGSRSLQCNSQGKCQCKPGVTGDKCDRCANNFFQFGPHGCQPCGCDPHGSHDNTPACDA 478
Query: 121 VKGQC 125
G C
Sbjct: 479 ETGIC 483
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 56/74 (75%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNS+G+CQCKPGVTGDKCDRC N + FG GC+ C C+P GS NTP CD+
Sbjct: 421 GSRSLQCNSQGKCQCKPGVTGDKCDRCANNFFQFGPHGCQPCGCDPHGSHDNTPACDAET 480
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 481 GICFCKENVEGRRC 494
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G +C +C+ Y+ N C C C+P+GS N C+ G+C CKPGV G +CD
Sbjct: 930 CKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYTGQCHCKPGVVGLRCD 989
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C+ + F GCK CEC+ +GS
Sbjct: 990 QCENFFFGFSVDGCKPCECDESGS 1013
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 105/255 (41%), Gaps = 67/255 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
C +C G CE+C D +Y GD C +C+CN N+ N+ G C
Sbjct: 813 CTECPVGYFGSRCEQCSDGFY---GDPTGLLGEVRTCKSCDCNG----NVDPNAVGNCNR 865
Query: 76 ------QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVK 122
+C G+ CD+C H+ C C C AG+ ++ CD V
Sbjct: 866 TTGECLKCIHNTAGENCDQCLPGHFGDPLALPHGKCDRCSCYAAGTEQDEQSISRCDQVT 925
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------- 171
GQC+ + + GR D C+ + + G
Sbjct: 926 GQCQ-CKPNVIGR---------------------DCGECQPGYFNIRSGNGCENCLCDPV 963
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS N C+ G+C CKPGV G +CD+C+ + F GCK CEC+ +GS CD
Sbjct: 964 GSYNSTCDRYTGQCHCKPGVVGLRCDQCENFFFGFSVDGCKPCECDESGS--KGFQCDQ- 1020
Query: 231 KGQCECKDNVEGAQC 245
GQC C DNVEG +C
Sbjct: 1021 NGQCPCNDNVEGRRC 1035
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 94/209 (44%), Gaps = 33/209 (15%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIG------SL 65
NRT G CL C + G NC++C ++ GD C C+C G S+
Sbjct: 864 NRTT--GECLKCIHNTAGENCDQCLPGHF---GDPLALPHGKCDRCSCYAAGTEQDEQSI 918
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
+ G+CQCKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 919 SRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--CDRYTGQ 976
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC 184
C G V LR +NF G + + C+ D GS QC+ G+C
Sbjct: 977 CHCKP----GVVG--LRCDQCENF-FFGFSVDGCKPCECD-----ESGSKGFQCDQNGQC 1024
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
C V G +CDRC N YD + GC +C
Sbjct: 1025 PCNDNVEGRRCDRCKENKYD-RQRGCVAC 1052
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 94/237 (39%), Gaps = 43/237 (18%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE C Y G F C C+C+ + C+SE G C C+ GD CD+C
Sbjct: 720 GQFCESCAPRYRHSPARGGPFMPCIPCDCHGHADI---CDSETGSCICQHNTQGDNCDQC 776
Query: 90 DVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQS 144
+Y G CK C C G+ N D+V +C SR Q
Sbjct: 777 AKGYYGNALGGTPTDCKRCPCPNDGACMQI-NGDTVICTECPVGYFGSRCE-------QC 828
Query: 145 RKNF--DPAGNRIWDLRRCKR-----DTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKC 195
F DP G + ++R CK + P G CN + G C +C G+ C
Sbjct: 829 SDGFYGDPTG-LLGEVRTCKSCDCNGNVDPNAVGN-----CNRTTGECLKCIHNTAGENC 882
Query: 196 DRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
D+C H+ C C C AG+ ++ CD V GQC+CK NV G C
Sbjct: 883 DQCLPGHFGDPLALPHGKCDRCSCYAAGTEQDEQSISRCDQVTGQCQCKPNVIGRDC 939
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 96/248 (38%), Gaps = 63/248 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL--DCQGDRDGPNCEKCRDNY----YQKSGD--- 51
C CNG +++C + HG L +C+ + DGP+C++C Y ++++
Sbjct: 300 CKCNGHASKCVASTGM-----HGERTLVCECRHNTDGPDCDRCLPLYNDVKWKRATSTEV 354
Query: 52 NFCTACNCNPIGS--------LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
N C ACNCN NL + C+ G C+RC N Y A C +
Sbjct: 355 NECKACNCNNFADKCYFDANLFNLTGHGGHCLDCRDNRDGPNCERCKENFYMRDNAYCVN 414
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C C+P GS S Q +S+G+ + V K RC
Sbjct: 415 CACDPVGS--------------RSLQCNSQGKCQCKPGVTGDK-----------CDRCAN 449
Query: 164 DTYPLG-----------HGGSLNL-QCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE--- 207
+ + G HG N C++E G C CK V G +C+ C ++ +
Sbjct: 450 NFFQFGPHGCQPCGCDPHGSHDNTPACDAETGICFCKENVEGRRCNECKPGFFNLDKNNR 509
Query: 208 AGCKSCEC 215
GC C C
Sbjct: 510 FGCTPCFC 517
>gi|195015387|ref|XP_001984192.1| GH16308 [Drosophila grimshawi]
gi|193897674|gb|EDV96540.1| GH16308 [Drosophila grimshawi]
Length = 1643
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNGF+++CFFD L+N+TGHGGHCLDC+ +RDG NCE+C++N+Y + + C CNC+
Sbjct: 362 CNCNGFADKCFFDANLFNQTGHGGHCLDCRDNRDGANCERCKENFYMRESAH-CENCNCD 420
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
+GS +LQCNS+G+CQCKPGVTGDKCDRC N++ FG GC+ C C+ GS NTP CD+
Sbjct: 421 AVGSRSLQCNSQGKCQCKPGVTGDKCDRCANNYFQFGAHGCQPCGCDARGSDDNTPACDA 480
Query: 121 VKGQC 125
G C
Sbjct: 481 ESGIC 485
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 116/262 (44%), Gaps = 84/262 (32%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL--DCQGDRDGPNCEKCRDNY----YQKSGD--- 51
C CNG +++C + HG L +C+ + DGP+C++C Y ++++
Sbjct: 302 CKCNGHASKCVASTGM-----HGERTLVCECRHNTDGPDCDRCLPLYNDVKWKRATSMDV 356
Query: 52 NFCTACNCNPIG-------SLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
N C ACNCN +L Q G C C+ G C+RC N Y A C++
Sbjct: 357 NECKACNCNGFADKCFFDANLFNQTGHGGHCLDCRDNRDGANCERCKENFYMRESAHCEN 416
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C NCD+V
Sbjct: 417 C------------NCDAV------------------------------------------ 422
Query: 164 DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
GS +LQCNS+G+CQCKPGVTGDKCDRC N++ FG GC+ C C+ GS N
Sbjct: 423 --------GSRSLQCNSQGKCQCKPGVTGDKCDRCANNYFQFGAHGCQPCGCDARGSDDN 474
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
TP CD+ G C CK+NVEG +C
Sbjct: 475 TPACDAESGICYCKENVEGRRC 496
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 101/252 (40%), Gaps = 61/252 (24%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE+C D +Y C +C+CN N+ N+ G C
Sbjct: 815 CTECPVGYFGSRCEQCSDGFYGDPTGLLGPVATCKSCDCNG----NVDTNAVGNCNRTTG 870
Query: 76 ---QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPN---CDSVKGQC 125
+C G CD+C H+ C C C AG+ ++ + CD V GQC
Sbjct: 871 ECLKCIHNTAGGHCDQCLPGHFGDPLALPHGKCDRCSCYAAGTEQDEQSILRCDQVTGQC 930
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSL 174
H + V R D C+ + + G GS
Sbjct: 931 -----------HCKPNVIGR-----------DCGECQPGYFNIRSGNGCENCLCDPVGSY 968
Query: 175 NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
N C+ G+C CKPGV G +CD+C + F GCK CEC+ +GS CD GQ
Sbjct: 969 NSTCDKYTGQCHCKPGVVGVRCDQCADYFFGFSSDGCKPCECDESGS--KGFQCDQ-SGQ 1025
Query: 234 CECKDNVEGAQC 245
C C DNVEG +C
Sbjct: 1026 CPCNDNVEGNRC 1037
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 112/258 (43%), Gaps = 28/258 (10%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTAC 57
C+C+G ++ C D E G C+ CQ + G NC++C YY + G + CT C
Sbjct: 748 CDCHGHADIC--DSET-------GSCI-CQHNTYGDNCDQCARGYYGNALGGTPYDCTRC 797
Query: 58 NCNPIGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVNHYD-----FGE-AGCKSCECNPA 109
C P +Q NS+ +C G G +C++C Y G A CKSC+CN
Sbjct: 798 PC-PNDGACMQINSDTVICTECPVGYFGSRCEQCSDGFYGDPTGLLGPVATCKSCDCNGN 856
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
NC+ G+C ++ G H + + DP RC
Sbjct: 857 VDTNAVGNCNRTTGECLKCIHNTAGG-HCDQCLPGHFG-DPLALPHGKCDRCSCYAAGTE 914
Query: 170 HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNC 227
L+C+ G+C CKP V G C C +++ GC++C C+P GS +T C
Sbjct: 915 QDEQSILRCDQVTGQCHCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--C 972
Query: 228 DSVKGQCECKDNVEGAQC 245
D GQC CK V G +C
Sbjct: 973 DKYTGQCHCKPGVVGVRC 990
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 89/205 (43%), Gaps = 42/205 (20%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN----- 66
NRT G CL C + G +C++C ++ GD C C+C G+
Sbjct: 866 NRTT--GECLKCIHNTAGGHCDQCLPGHF---GDPLALPHGKCDRCSCYAAGTEQDEQSI 920
Query: 67 LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
L+C+ G+C CKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 921 LRCDQVTGQCHCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--CDKYTGQ 978
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-----RRCKRDTYPLGHGGSLNLQCN 179
C H + V + D + + + C+ D GS QC+
Sbjct: 979 C-----------HCKPGVVGVR-CDQCADYFFGFSSDGCKPCECD-----ESGSKGFQCD 1021
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G++CDRC N YD
Sbjct: 1022 QSGQCPCNDNVEGNRCDRCKENKYD 1046
>gi|390339642|ref|XP_003725054.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1-like
[Strongylocentrotus purpuratus]
Length = 1497
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 94/125 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN ++RCFFD+ELYNRTG GGHC++C+ + G +CE+CRDNY++ S D C CNC+
Sbjct: 239 CNCNFHADRCFFDEELYNRTGSGGHCMECRDETSGVSCERCRDNYFRTSPDARCQPCNCD 298
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSLN QC+S GRCQCK GV GDKC++C N YDFGE GC+SCEC AGSV N P+C+
Sbjct: 299 QTGSLNQQCDSSGRCQCKVGVGGDKCNQCLPNFYDFGEGGCRSCECVRAGSVDNNPDCNQ 358
Query: 121 VKGQC 125
G C
Sbjct: 359 GTGLC 363
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 55/76 (72%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSLN QC+S GRCQCK GV GDKC++C N YDFGE GC+SCEC AGSV N P+C+
Sbjct: 301 GSLNQQCDSSGRCQCKVGVGGDKCNQCLPNFYDFGEGGCRSCECVRAGSVDNNPDCNQGT 360
Query: 232 GQCECKDNVEGAQCRS 247
G C CK +VEG C +
Sbjct: 361 GLCNCKLHVEGRDCET 376
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 86/209 (41%), Gaps = 47/209 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
G CL C D G CE C +Y G+ C ACNC GS + +C+ S G+C C
Sbjct: 749 GECLKCVFDTGGFYCENCLPGFYGNALGSPKGEQ-CQACNCYVSGSTSNECDQSNGQCSC 807
Query: 78 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
P VTG C C+ +++ GC+ C C GS + CD GQC
Sbjct: 808 MPFVTGRDCSECEAGYWNIDSGRGCEPCYCESTGSTSD--QCDIRSGQC----------- 854
Query: 137 HTELRVQSRKNFDPAGNRIWDLR--RCKRDTYPLG----------HGGSLNLQCNSEGRC 184
P + LR +C+ D Y GSL C +G C
Sbjct: 855 -------------PCKPGVDGLRCDQCQYDHYDYSVEGCTPCECNPQGSLYANCTDDGVC 901
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
C+PGV GDKCD C+ N Y+ GC C
Sbjct: 902 DCQPGVIGDKCDSCEENFYNIA-LGCIPC 929
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS + QC+ G+C CKPGV G +CD+C +HYD+ GC CECNP GS+ NC
Sbjct: 841 GSTSDQCDIRSGQCPCKPGVDGLRCDQCQYDHYDYSVEGCTPCECNPQGSLY--ANCTD- 897
Query: 231 KGQCECKDNVEGAQCRS 247
G C+C+ V G +C S
Sbjct: 898 DGVCDCQPGVIGDKCDS 914
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 106/270 (39%), Gaps = 56/270 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C D G C+ C + G +CE C+D +Y + + CT C
Sbjct: 627 CECNGHADYCDVDT---------GECI-CNHNTMGTSCELCQDGFYGNALEGTAYDCTRC 676
Query: 58 NCNPIGSLNLQCNSEGRC---QCKPGVTGDKCDRCDVNHY------DFGEAGCKSCECNP 108
C G N ++ G +C G G++CD C +Y C C CN
Sbjct: 677 PCP--GGTNCFVDNLGDVVCTECPSGYVGNRCDYCADGYYGDPTGIQGQRTACGQCYCNY 734
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA--GNRIWDLRRCKRDTY 166
+ NCD G+C + G +N P GN +
Sbjct: 735 NIDPNSVGNCDRFTGECLKCVFDTGGFYC--------ENCLPGFYGNALGS--------- 777
Query: 167 PLGH---------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCEC 215
P G GS + +C+ S G+C C P VTG C C+ +++ GC+ C C
Sbjct: 778 PKGEQCQACNCYVSGSTSNECDQSNGQCSCMPFVTGRDCSECEAGYWNIDSGRGCEPCYC 837
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS + CD GQC CK V+G +C
Sbjct: 838 ESTGSTSD--QCDIRSGQCPCKPGVDGLRC 865
>gi|341897007|gb|EGT52942.1| CBN-LAM-2 protein [Caenorhabditis brenneri]
Length = 1633
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ SNRC+FD++L+ TGHGGHC+DCQG+ G +CEKC N++++ G+NFC AC CN
Sbjct: 347 CNCSQLSNRCYFDQQLFEETGHGGHCIDCQGNTQGVHCEKCVANHWRRPGENFCVACGCN 406
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGSL+ QC+ EG+CQCKPGVTG CD+C YDF GCK+C C +GS+ N P CDS
Sbjct: 407 EIGSLSTQCDGEGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKNCGCEASGSLNNQPRCDS 466
Query: 121 VKGQCESAQLSSRGR 135
G C + +L+ GR
Sbjct: 467 STGSC-TCKLNVEGR 480
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC+ EG+CQCKPGVTG CD+C YDF GCK+C C +GS+ N P CDS
Sbjct: 409 GSLSTQCDGEGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKNCGCEASGSLNNQPRCDSST 468
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 469 GSCTCKLNVEGRQC 482
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C DC + G C++C YY + C CNC+P+GS C+ G+CQCKPGVT
Sbjct: 914 GQC-DCLPNVIGIQCDQCAHGYYNITSGLGCQECNCDPLGSEANTCDVVTGQCQCKPGVT 972
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +CD+C H+ F GC+ C+C GS + CD GQC
Sbjct: 973 GKRCDQCAPYHFGFSANGCQPCDCEYIGS--ESQQCDVNSGQC 1013
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKPGVTG +CD+C H+ F GC+ C+C GS + CD GQC CK+NVE
Sbjct: 963 GQCQCKPGVTGKRCDQCAPYHFGFSANGCQPCDCEYIGS--ESQQCDVNSGQCLCKENVE 1020
Query: 242 GAQC 245
G +C
Sbjct: 1021 GRRC 1024
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 59/118 (50%), Gaps = 20/118 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN-------LQCN 70
G C C + G NCEKC+ Y+ GD C +C C G+ L+CN
Sbjct: 854 GECKKCVFNTHGFNCEKCKPGYW---GDALIEPKGNCQSCGCFAAGTRRPNNDYTLLECN 910
Query: 71 SE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCE 126
E G+C C P V G +CD+C +Y+ GC+ C C+P GS NT CD V GQC+
Sbjct: 911 QEDGQCDCLPNVIGIQCDQCAHGYYNITSGLGCQECNCDPLGSEANT--CDVVTGQCQ 966
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ G C++C ++ S N C C+C IGS + QC+ + G+C CK V G +CD
Sbjct: 967 CKPGVTGKRCDQCAPYHFGFSA-NGCQPCDCEYIGSESQQCDVNSGQCLCKENVEGRRCD 1025
Query: 88 RCDVNHYDFGEAGCKSCE 105
+C N Y + GC C+
Sbjct: 1026 QCAENRYGITQ-GCLPCD 1042
>gi|268580031|ref|XP_002644998.1| C. briggsae CBR-LAM-2 protein [Caenorhabditis briggsae]
Length = 1633
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ SNRC+FD++L+ +TGHGGHC+DCQG+ G +CE+C N++++ G+N+C AC CN
Sbjct: 347 CNCSQLSNRCYFDQQLFEQTGHGGHCIDCQGNTQGVHCEQCVANHWRRPGENYCVACGCN 406
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGSL+ QC++EG+CQCKPGVTG CD+C +YDF GCK+C C +GS+ N P CDS
Sbjct: 407 EIGSLSTQCDNEGKCQCKPGVTGRFCDQCLDGYYDFSTNGCKNCGCEASGSLNNQPRCDS 466
Query: 121 VKGQCESAQLSSRGR 135
G C + +L+ GR
Sbjct: 467 TSGSC-TCKLNVEGR 480
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 53/74 (71%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC++EG+CQCKPGVTG CD+C +YDF GCK+C C +GS+ N P CDS
Sbjct: 409 GSLSTQCDNEGKCQCKPGVTGRFCDQCLDGYYDFSTNGCKNCGCEASGSLNNQPRCDSTS 468
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 469 GSCTCKLNVEGRQC 482
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 119/304 (39%), Gaps = 74/304 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------C 54
C+C+ SN C G C+ C+ + G CE+C YY GD C
Sbjct: 736 CDCHNHSNSC---------EAESGSCI-CEHNTAGDTCERCARGYY---GDALQGTSEDC 782
Query: 55 TACNCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGS 111
C C G L + + C +C G TG +CD C + + C C CN
Sbjct: 783 QKCPCPNDGPCILHADGDVICTECPNGYTGRRCDECSDGFFGNPKDDIECNECACNNNTD 842
Query: 112 VKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQSRKNFDP-----AGNR---- 154
+ NCD + G+C+ ++ G + ++ + N P AG R
Sbjct: 843 PNSIGNCDKITGECKKCVYNTHGFNCEKCKPGYWGDALIEPKGNCRPCGCFAAGTRRPNN 902
Query: 155 -------------------IWDLR--RCKRDTYPLGHG-----------GSLNLQCNS-E 181
+W ++ +C+ Y + G GS C+
Sbjct: 903 DYTLLECEQTDGQCECLPNVWGMQCDQCESGFYNITSGLGCQECGCDPLGSEGNTCDVVT 962
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CKPGV G CD+C H+ F GC+ C+C GS + CD GQC CK+NVE
Sbjct: 963 GQCLCKPGVIGQHCDQCAPYHFGFSANGCQPCDCEYIGS--ESQQCDVNNGQCLCKENVE 1020
Query: 242 GAQC 245
G +C
Sbjct: 1021 GRRC 1024
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 38/209 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN-------LQC- 69
G C C + G NCEKC+ Y+ GD C C C G+ L+C
Sbjct: 854 GECKKCVYNTHGFNCEKCKPGYW---GDALIEPKGNCRPCGCFAAGTRRPNNDYTLLECE 910
Query: 70 NSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
++G+C+C P V G +CD+C+ Y+ GC+ C C+P GS NT CD V GQC
Sbjct: 911 QTDGQCECLPNVWGMQCDQCESGFYNITSGLGCQECGCDPLGSEGNT--CDVVTGQC--- 965
Query: 129 QLSSRGRV--HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQ 185
L G + H + F G + D + GS + QC+ + G+C
Sbjct: 966 -LCKPGVIGQHCDQCAPYHFGFSANGCQPCDCE----------YIGSESQQCDVNNGQCL 1014
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
CK V G +CD+C N Y + GC C+
Sbjct: 1015 CKENVEGRRCDQCAENRYGITQ-GCLPCD 1042
>gi|308511423|ref|XP_003117894.1| CRE-LAM-2 protein [Caenorhabditis remanei]
gi|308238540|gb|EFO82492.1| CRE-LAM-2 protein [Caenorhabditis remanei]
Length = 1550
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ SNRC+FD++L+ TGHGGHC+DCQG+ G +CE+C N++++ G+N+C AC CN
Sbjct: 347 CNCSQLSNRCYFDQQLFEETGHGGHCIDCQGNTHGVHCEQCVANHWRRPGENYCVACGCN 406
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGSL+ QC+ EG+CQCKPGVTG CD+C +YDF GCK+C C +GS+ N P CDS
Sbjct: 407 EIGSLSTQCDKEGKCQCKPGVTGRFCDQCLDGYYDFSTNGCKNCGCEASGSLNNQPRCDS 466
Query: 121 VKGQCESAQLSSRGR 135
G C + +L+ GR
Sbjct: 467 TTGSC-TCKLNVEGR 480
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC+ EG+CQCKPGVTG CD+C +YDF GCK+C C +GS+ N P CDS
Sbjct: 409 GSLSTQCDKEGKCQCKPGVTGRFCDQCLDGYYDFSTNGCKNCGCEASGSLNNQPRCDSTT 468
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 469 GSCTCKLNVEGRQC 482
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
DC + G C++C +Y + C CNC+P+GS C+ G+C CK GVTG +C
Sbjct: 917 DCLPNVIGIQCDQCAHGFYNITSGLGCQECNCDPLGSEGNTCDVVTGQCTCKQGVTGQRC 976
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
D+C H+ F GC+ C+C GS + CD GQC
Sbjct: 977 DQCAPYHFGFSANGCQPCDCEYIGS--ESQQCDVNSGQC 1013
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK GVTG +CD+C H+ F GC+ C+C GS + CD GQC CK+NVE
Sbjct: 963 GQCTCKQGVTGQRCDQCAPYHFGFSANGCQPCDCEYIGS--ESQQCDVNSGQCLCKENVE 1020
Query: 242 GAQC 245
G +C
Sbjct: 1021 GRRC 1024
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 93/220 (42%), Gaps = 60/220 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN-------LQCN 70
G C C + G NCEKC+ Y+ GD C +C C G+ L+CN
Sbjct: 854 GECKKCVFNTHGFNCEKCKPGYW---GDALIEPKGNCQSCGCFAAGTRRPNNDYTLLECN 910
Query: 71 -SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
++G+C C P V G +CD+C Y+ GC+ C C+P GS NT CD V GQC
Sbjct: 911 QADGQCDCLPNVIGIQCDQCAHGFYNITSGLGCQECNCDPLGSEGNT--CDVVTGQCTCK 968
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLG------------HGGSLN 175
Q + +RC + Y G + GS +
Sbjct: 969 QGVTG-------------------------QRCDQCAPYHFGFSANGCQPCDCEYIGSES 1003
Query: 176 LQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
QC+ + G+C CK V G +CD+C N Y + GC C+
Sbjct: 1004 QQCDVNSGQCLCKENVEGRRCDQCAENRYGITQ-GCLPCD 1042
>gi|443688981|gb|ELT91503.1| hypothetical protein CAPTEDRAFT_172041 [Capitella teleta]
Length = 1601
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 95/126 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN FS+RCFFD+E+Y +TGHGGHCLDC+ + GP+CE+C+D+YY++ ++ C +C+CN
Sbjct: 309 CNCNHFSDRCFFDEEMYAQTGHGGHCLDCRDNTAGPHCERCKDDYYRRDVNDRCRSCDCN 368
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GS QC++ GRC+CKPGVTGDKCDRC N+++FG GC+ CEC GS N P C
Sbjct: 369 PTGSEVTQCDTTGRCRCKPGVTGDKCDRCMPNYFEFGPNGCRECECLVEGSRDNNPECLP 428
Query: 121 VKGQCE 126
G C+
Sbjct: 429 DTGTCQ 434
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 51/74 (68%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS QC++ GRC+CKPGVTGDKCDRC N+++FG GC+ CEC GS N P C
Sbjct: 371 GSEVTQCDTTGRCRCKPGVTGDKCDRCMPNYFEFGPNGCRECECLVEGSRDNNPECLPDT 430
Query: 232 GQCECKDNVEGAQC 245
G C+CK+NVEG C
Sbjct: 431 GTCQCKENVEGQNC 444
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 109/247 (44%), Gaps = 48/247 (19%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCN---SEGR 74
CL+C+ G C+ C D YY GD C+ C CN N N + G
Sbjct: 762 CLNCEEGTTGNRCDMCADGYY---GDPMGLHGPSRQCSKCTCNENIDPNAVANCNSTTGE 818
Query: 75 C-QCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECN-----PAGSVKNTPNCDSVKGQ 124
C +C G CDRC +Y F + CK+CEC P+G C++ GQ
Sbjct: 819 CLKCIYNTFGFYCDRCLPGYYGDPFVFPKGDCKACECYAPGNLPSGRPDGVLECNAATGQ 878
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNLQC 178
C+ +RV ++ D + W++ RC D H S +L
Sbjct: 879 CD-----------CHVRVTGQR-CDQCQDGYWNIASGTGCERCNCDLTG-AHNSSCDLH- 924
Query: 179 NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+G+C CK GV G +CD C NHY F GC +CEC+P GS N C+ GQC CKD
Sbjct: 925 --DGQCLCKDGVGGRQCDVCSQNHYGFSYDGCSTCECDPDGS--NGLQCEERSGQCPCKD 980
Query: 239 NVEGAQC 245
+VEG C
Sbjct: 981 SVEGRTC 987
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 112/260 (43%), Gaps = 30/260 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C+CNG S+ C + G C+ CQ + G +CE+C YY + C AC
Sbjct: 695 CDCNGHSDACDINT---------GRCI-CQHNTQGDHCEQCASGYYGYAMGGTPEDCQAC 744
Query: 58 NCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAG 110
C G + + C C+ G TG++CD C +Y G G C C CN
Sbjct: 745 PCPQQGECIQLLDGDVACLNCEEGTTGNRCDMCADGYYGDPMGLHGPSRQCSKCTCNENI 804
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYP 167
NC+S G+C ++ G R DP D + C+ P
Sbjct: 805 DPNAVANCNSTTGECLKCIYNTFGFYCD--RCLPGYYGDPFVFPKGDCKACECYAPGNLP 862
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
G + L+CN+ G+C C VTG +CD+C +++ GC+ C C+ G+ +
Sbjct: 863 SGRPDGV-LECNAATGQCDCHVRVTGQRCDQCQDGYWNIASGTGCERCNCDLTGA--HNS 919
Query: 226 NCDSVKGQCECKDNVEGAQC 245
+CD GQC CKD V G QC
Sbjct: 920 SCDLHDGQCLCKDGVGGRQC 939
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 90/216 (41%), Gaps = 54/216 (25%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN-------LQCN 70
G CL C + G C++C YY GD F C AC C G+L L+CN
Sbjct: 817 GECLKCIYNTFGFYCDRCLPGYY---GDPFVFPKGDCKACECYAPGNLPSGRPDGVLECN 873
Query: 71 SE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
+ G+C C VTG +CD+C +++ GC+ C C+ G+ + +CD GQC
Sbjct: 874 AATGQCDCHVRVTGQRCDQCQDGYWNIASGTGCERCNCDLTGA--HNSSCDLHDGQCLCK 931
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQC 178
D G R D+ C ++ Y + G S LQC
Sbjct: 932 --------------------DGVGGRQCDV--CSQNHYGFSYDGCSTCECDPDGSNGLQC 969
Query: 179 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
G+C CK V G CDRC N Y+ AGC C
Sbjct: 970 EERSGQCPCKDSVEGRTCDRCMENKYNIT-AGCVDC 1004
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
H G CL C+ G C+ C N+Y S D C+ C C+P GS LQC G+C CK
Sbjct: 924 HDGQCL-CKDGVGGRQCDVCSQNHYGFSYDG-CSTCECDPDGSNGLQCEERSGQCPCKDS 981
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSC 104
V G CDRC N Y+ AGC C
Sbjct: 982 VEGRTCDRCMENKYNIT-AGCVDC 1004
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 101/268 (37%), Gaps = 73/268 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHG---GHCLDCQGDRDGPNCEKCRDNY----YQKSGDN- 52
C CNG ++ C TG G C+ + DGPNCE+C Y +Q++ ++
Sbjct: 249 CRCNGHASECV------RSTGQGLEERQVCRCEHNTDGPNCERCLPFYNDSPWQRATNDD 302
Query: 53 --FCTACNCNPIG-------SLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY--DFGEAG 100
C CNCN + Q G C C+ G C+RC ++Y D +
Sbjct: 303 AHECQPCNCNHFSDRCFFDEEMYAQTGHGGHCLDCRDNTAGPHCERCKDDYYRRDVNDR- 361
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+SC+CNP GS E Q + GR + V K R
Sbjct: 362 CRSCDCNPTGS--------------EVTQCDTTGRCRCKPGVTGDK-----------CDR 396
Query: 161 CKRDTYPLGHGGSLNLQCNSEG-------------RCQCKPGVTGDKCDRCDVNHYDF-- 205
C + + G G +C EG CQCK V G CD+C +
Sbjct: 397 CMPNYFEFGPNGCRECECLVEGSRDNNPECLPDTGTCQCKENVEGQNCDQCKPGFFGMHL 456
Query: 206 -GEAGCKSCECNPAGSVKNTPNCDSVKG 232
GC SC C+ S+ C+S +G
Sbjct: 457 DDPLGCLSCFCHGHSSI-----CESARG 479
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 94/230 (40%), Gaps = 27/230 (11%)
Query: 35 GPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCD 90
G CE C +++++ D + C C+CN G + + GRC C+ GD C++C
Sbjct: 669 GQFCESCAPGFFRETEDGGPFSRCIPCDCN--GHSDACDINTGRCICQHNTQGDHCEQCA 726
Query: 91 VNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
+Y + G C++C C G + D CE +R + +
Sbjct: 727 SGYYGYAMGGTPEDCQACPCPQQGECIQLLDGDVACLNCEEGTTGNRCDMCADGYYG--- 783
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYD 204
DP G R+C + T + CNS G C +C G CDRC +Y
Sbjct: 784 --DPMGLH-GPSRQCSKCTCNENIDPNAVANCNSTTGECLKCIYNTFGFYCDRCLPGYYG 840
Query: 205 ----FGEAGCKSCECN-----PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F + CK+CEC P+G C++ GQC+C V G +C
Sbjct: 841 DPFVFPKGDCKACECYAPGNLPSGRPDGVLECNAATGQCDCHVRVTGQRC 890
>gi|427796483|gb|JAA63693.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 1583
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S +C+FD+EL+ RTGHGGHC++C + DGPNCE+CR+NYYQ S D C C C+
Sbjct: 308 CNCNGRSRKCYFDQELFERTGHGGHCVNCSDNTDGPNCERCRENYYQNS-DGRCVPCGCD 366
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS LQCNS+G+C CKPGV G +CDRC N YDF E GC+ C C+ AGSV + P+C+
Sbjct: 367 PVGSRMLQCNSKGQCPCKPGVDGQRCDRCAPNFYDFSEQGCRLCGCSQAGSVDSPPSCNP 426
Query: 121 VKGQC 125
G C
Sbjct: 427 DTGVC 431
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS LQCNS+G+C CKPGV G +CDRC N YDF E GC+ C C+ AGSV + P+C+
Sbjct: 369 GSRMLQCNSKGQCPCKPGVDGQRCDRCAPNFYDFSEQGCRLCGCSQAGSVDSPPSCNPDT 428
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 429 GVCRCKANVEGRQC 442
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 111/245 (45%), Gaps = 51/245 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCN---SEGRC-Q 76
CL+C G C+ C D +Y NF C C CN N N + G C +
Sbjct: 761 CLECPQGYSGRRCDLCFDGHYGDPQGNFGPKVPCKKCECNDNIDPNAVANCNTTTGECLK 820
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C TG C+RC H FG+A CK C+C+ GS++++ CD GQC
Sbjct: 821 CVYNTTGFNCERCLPGH--FGDALSVPKGDCKPCDCHRLGSLEDS-ECDPRTGQC----- 872
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNLQCNSE 181
+ + V Q R+ + W+L+ G G GS N C+
Sbjct: 873 ACKANVAGRQCGQCREGY-------WNLQS--------GDGCEACNCNLVGSYNRTCDQR 917
Query: 182 -GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C C+PGVTG +CD+C HY F GC C+C+ GSV + C + GQCEC+ NV
Sbjct: 918 TGHCHCRPGVTGKQCDQCLPYHYGFSPDGCVPCDCDSQGSV--SLQC-APDGQCECRPNV 974
Query: 241 EGAQC 245
EG +C
Sbjct: 975 EGRRC 979
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN 58
CNCN + YNRT GHC C+ G C++C +Y S D C C+
Sbjct: 902 CNCNLVGS--------YNRTCDQRTGHC-HCRPGVTGKQCDQCLPYHYGFSPDG-CVPCD 951
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
C+ GS++LQC +G+C+C+P V G +C+RC N Y+ EAGC C
Sbjct: 952 CDSQGSVSLQCAPDGQCECRPNVEGRRCERCKENKYN-KEAGCVDC 996
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 86/208 (41%), Gaps = 31/208 (14%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNP 108
C CNCN L C + G C C+ G+ C+RC +Y AG C+ C C
Sbjct: 691 CVPCNCN---GHALICEPDTGHCICQHNTAGEFCERCAPRYYGNALAGTPDDCQPCPCPD 747
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR----D 164
G+ P+ V +C R + + DP GN CK+ D
Sbjct: 748 QGACAVLPDESVVCLECPQGYSGRRCDLCFDGHYG-----DPQGN-FGPKVPCKKCECND 801
Query: 165 TYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNP 217
+ N + G C +C TG C+RC H FG+A CK C+C+
Sbjct: 802 NIDPNAVANCN---TTTGECLKCVYNTTGFNCERCLPGH--FGDALSVPKGDCKPCDCHR 856
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS++++ CD GQC CK NV G QC
Sbjct: 857 LGSLEDS-ECDPRTGQCACKANVAGRQC 883
>gi|443709164|gb|ELU03955.1| hypothetical protein CAPTEDRAFT_62597, partial [Capitella teleta]
Length = 564
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 95/126 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN FS+RCFFD+E+Y +TGHGGHCLDC+ + GP+CE+C+D+YY++ ++ C +C+CN
Sbjct: 62 CNCNHFSDRCFFDEEMYAQTGHGGHCLDCRDNTAGPHCERCKDDYYRRDVNDRCRSCDCN 121
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GS QC++ GRC+CKPGVTGDKCDRC N+++FG GC+ CEC GS N P C
Sbjct: 122 PTGSEVTQCDTTGRCRCKPGVTGDKCDRCMPNYFEFGPNGCRECECLVEGSRDNNPECLP 181
Query: 121 VKGQCE 126
G C+
Sbjct: 182 DTGTCQ 187
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 51/74 (68%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS QC++ GRC+CKPGVTGDKCDRC N+++FG GC+ CEC GS N P C
Sbjct: 124 GSEVTQCDTTGRCRCKPGVTGDKCDRCMPNYFEFGPNGCRECECLVEGSRDNNPECLPDT 183
Query: 232 GQCECKDNVEGAQC 245
G C+CK+NVEG C
Sbjct: 184 GTCQCKENVEGQNC 197
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 101/268 (37%), Gaps = 73/268 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGG---HCLDCQGDRDGPNCEKCRDNY----YQKSGDN- 52
C CNG ++ C TG G C+ + DGPNCE+C Y +Q++ ++
Sbjct: 2 CRCNGHASECV------RSTGQGLEERQVCRCEHNTDGPNCERCLPFYNDSPWQRATNDD 55
Query: 53 --FCTACNCNPIG-------SLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY--DFGEAG 100
C CNCN + Q G C C+ G C+RC ++Y D +
Sbjct: 56 AHECQPCNCNHFSDRCFFDEEMYAQTGHGGHCLDCRDNTAGPHCERCKDDYYRRDVNDR- 114
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+SC+CNP GS E Q + GR + V K R
Sbjct: 115 CRSCDCNPTGS--------------EVTQCDTTGRCRCKPGVTGDK-----------CDR 149
Query: 161 CKRDTYPLGHGGSLNLQCNSEGR-------------CQCKPGVTGDKCDRCDVNHYDF-- 205
C + + G G +C EG CQCK V G CD+C +
Sbjct: 150 CMPNYFEFGPNGCRECECLVEGSRDNNPECLPDTGTCQCKENVEGQNCDQCKPGFFGMHL 209
Query: 206 -GEAGCKSCECNPAGSVKNTPNCDSVKG 232
GC SC C+ S+ C+S +G
Sbjct: 210 DDPLGCLSCFCHGHSSI-----CESARG 232
>gi|147899718|ref|NP_001090659.1| laminin subunit gamma-1 precursor [Xenopus (Silurana) tropicalis]
gi|224493162|sp|A0JP86.1|LAMC1_XENTR RecName: Full=Laminin subunit gamma-1; Flags: Precursor
gi|117558099|gb|AAI27298.1| lamc1 protein [Xenopus (Silurana) tropicalis]
Length = 1592
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 87/125 (69%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S C+FD ELY TGHGGHC C + DGPNCE+CR+NYY++ + C AC CN
Sbjct: 325 CNCNGRSQECYFDPELYRSTGHGGHCTGCADNTDGPNCERCRENYYRQDNNEPCHACQCN 384
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC++ GRC CKPGV G+KCDRC + EAGC+ C CNPAGS T C+
Sbjct: 385 PVGSLSTQCDNYGRCSCKPGVMGEKCDRCQPGFHSLTEAGCRPCACNPAGS---TDECNV 441
Query: 121 VKGQC 125
G+C
Sbjct: 442 ETGRC 446
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC++ GRC CKPGV G+KCDRC + EAGC+ C CNPAGS T C+
Sbjct: 387 GSLSTQCDNYGRCSCKPGVMGEKCDRCQPGFHSLTEAGCRPCACNPAGS---TDECNVET 443
Query: 232 GQCECKDNVEGAQC 245
G+C CKDNVEG C
Sbjct: 444 GRCSCKDNVEGFNC 457
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 108/241 (44%), Gaps = 41/241 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ + C C C S N+ N+ G C
Sbjct: 775 CTNCPLGTTGKRCELCDDGYFGDPLGENGAPRPCRICEC----SNNIDPNAVGNCDRLTG 830
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCE- 126
+C G CDRC Y A C++C CNP G+VK C+ V GQCE
Sbjct: 831 ECLKCIYNTGGFYCDRCRDGFYGNPLAQNPDLKCRACSCNPYGTVKGQSGCNQVTGQCEC 890
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRC 184
++ R E P + R C+R D + LG S + QC+ G+C
Sbjct: 891 LPHVTERDCSACE----------PGFYNLLSGRGCERCDCHSLG---STSGQCDVRTGQC 937
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+C PG++G +C +C+ NH+ FG GCK C+C+P GS + C G+CECK G +
Sbjct: 938 ECHPGISGQQCQQCEPNHFGFGPEGCKPCDCDPEGS--GSLQCKE-DGRCECKSGFVGTR 994
Query: 245 C 245
C
Sbjct: 995 C 995
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 97/207 (46%), Gaps = 39/207 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++CRD +Y ++ D C AC+CNP G++ Q CN G+C+
Sbjct: 830 GECLKCIYNTGGFYCDRCRDGFYGNPLAQNPDLKCRACSCNPYGTVKGQSGCNQVTGQCE 889
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VT C C+ Y+ GC+ C+C+ GS CD GQCE
Sbjct: 890 CLPHVTERDCSACEPGFYNLLSGRGCERCDCHSLGSTSG--QCDVRTGQCE--------- 938
Query: 136 VHTELRVQS-------RKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCK 187
H + Q F P G CK D P G G +LQC +GRC+CK
Sbjct: 939 CHPGISGQQCQQCEPNHFGFGPEG--------CKPCDCDPEGSG---SLQCKEDGRCECK 987
Query: 188 PGVTGDKCDRCDVNH-YDFGEAGCKSC 213
G G +CD+C+ N+ Y+ GC+ C
Sbjct: 988 SGFVGTRCDQCEENYFYNRSGPGCQEC 1014
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 112/260 (43%), Gaps = 31/260 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S+ C D E G C DCQ + GP+CE+C + YY S + C C
Sbjct: 707 CTCNGHSDTC--DPE-------SGVC-DCQHNTAGPHCERCSEGYYGDSTTGSASDCQPC 756
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ GE G C+ CEC+
Sbjct: 757 PC-PGGSSCAVVPRTKEVVCTNCPLGTTGKRCELCDDGYFGDPLGENGAPRPCRICECSN 815
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NCD + G+C ++ G R N A N R C + Y
Sbjct: 816 NIDPNAVGNCDRLTGECLKCIYNTGGFYCDRCRDGFYGN-PLAQNPDLKCRACSCNPYGT 874
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPN 226
G S CN G+C+C P VT C C+ Y+ GC+ C+C+ GS
Sbjct: 875 VKGQS---GCNQVTGQCECLPHVTERDCSACEPGFYNLLSGRGCERCDCHSLGSTSG--Q 929
Query: 227 CDSVKGQCECKDNVEGAQCR 246
CD GQCEC + G QC+
Sbjct: 930 CDVRTGQCECHPGISGQQCQ 949
>gi|260828973|ref|XP_002609437.1| hypothetical protein BRAFLDRAFT_226629 [Branchiostoma floridae]
gi|229294793|gb|EEN65447.1| hypothetical protein BRAFLDRAFT_226629 [Branchiostoma floridae]
Length = 1572
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 86/126 (68%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN ++ C FD +LY RTGHGG C+ C+ + GPNCE+C + YY+ + C CNCN
Sbjct: 310 CNCNNLADSCEFDSDLYRRTGHGGRCIGCRQNTAGPNCERCLEYYYRAQQSDPCQPCNCN 369
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS+ QC+ GRCQCKPGV GDKCDRC H+ EAGC+ C C+ AG+V N CD
Sbjct: 370 PLGSIQQQCDPLGRCQCKPGVGGDKCDRCQDGHFGLSEAGCRQCSCDSAGTVNNAGACDQ 429
Query: 121 VKGQCE 126
V GQC+
Sbjct: 430 VTGQCQ 435
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS+ QC+ GRCQCKPGV GDKCDRC H+ EAGC+ C C+ AG+V N CD V
Sbjct: 372 GSIQQQCDPLGRCQCKPGVGGDKCDRCQDGHFGLSEAGCRQCSCDSAGTVNNAGACDQVT 431
Query: 232 GQCECKDNVEGAQC 245
GQC+CK NVEG +C
Sbjct: 432 GQCQCKQNVEGPRC 445
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNH 93
G C++C D Y+ + + C C+C+ GSL+ C + G+CQCKPGV G +C++C NH
Sbjct: 882 GLQCDRCVDGYWNINSGSGCEVCDCDTTGSLDTSCELNSGQCQCKPGVGGRRCEKCLANH 941
Query: 94 YDFGEAGCKSCECNPAGSV 112
Y F +GC +C+C+P GS+
Sbjct: 942 YGFSTSGCTACDCDPRGSL 960
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 103/251 (41%), Gaps = 63/251 (25%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPG 80
C C G CE+C D YY Q C C C S N+ N+ G C G
Sbjct: 763 CTSCTEGYIGDRCERCMDGYYGDPIGQYGQPRPCQRCIC----SGNIDENAVGNCNSITG 818
Query: 81 --------VTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
TG C+RC +Y F + CK C C G+ + CD GQC
Sbjct: 819 ECLKCVYFTTGTACERCLPGYYGDATSFPKPPCKPCNCYQFGT-QAGGECDQNTGQC--- 874
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLR--RCKRDTYPLGHG-----------GSLN 175
P + + L+ RC + + G GSL+
Sbjct: 875 ---------------------PCLSNVVGLQCDRCVDGYWNINSGSGCEVCDCDTTGSLD 913
Query: 176 LQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
C + G+CQCKPGV G +C++C NHY F +GC +C+C+P GS+ + CD G C
Sbjct: 914 TSCELNSGQCQCKPGVGGRRCEKCLANHYGFSTSGCTACDCDPRGSL--SLQCDEF-GSC 970
Query: 235 ECKDNVEGAQC 245
C++ V G +C
Sbjct: 971 PCREGVVGDKC 981
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
G CEKC N+Y S CTAC+C+P GSL+LQC+ G C C+ GV GDKCD C N+Y
Sbjct: 931 GRRCEKCLANHYGFSTSG-CTACDCDPRGSLSLQCDEFGSCPCREGVVGDKCDACKENYY 989
Query: 95 DFGEAGCKSC 104
D GC C
Sbjct: 990 DVAR-GCIEC 998
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-----GR 74
G CL C G CE+C YY +F C CNC G+ Q E G+
Sbjct: 818 GECLKCVYFTTGTACERCLPGYY-GDATSFPKPPCKPCNCYQFGT---QAGGECDQNTGQ 873
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C V G +CDRC +++ +GC+ C+C+ GS+ + C+ GQC+
Sbjct: 874 CPCLSNVVGLQCDRCVDGYWNINSGSGCEVCDCDTTGSLDTS--CELNSGQCQCK--PGV 929
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
G E + + F +G C D P G SL+LQC+ G C C+ GV G
Sbjct: 930 GGRRCEKCLANHYGFSTSG--------CTACDCDPRG---SLSLQCDEFGSCPCREGVVG 978
Query: 193 DKCDRCDVNHYDFGEAGCKSC 213
DKCD C N+YD GC C
Sbjct: 979 DKCDACKENYYDVAR-GCIEC 998
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 97/249 (38%), Gaps = 63/249 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDC--QGDRDGPNCEKCRDNYYQK-------SGD 51
C CNG + C E TG GG L C + + G +C++C + + S
Sbjct: 249 CKCNGHAASC----EANVNTGGGGARLICVCEHNTAGVDCDRCLPMFNDRPWGRATASDS 304
Query: 52 NFCTACNCNPIGS-------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG-CK 102
+ C ACNCN + L + GRC C+ G C+RC +Y ++ C+
Sbjct: 305 HECQACNCNNLADSCEFDSDLYRRTGHGGRCIGCRQNTAGPNCERCLEYYYRAQQSDPCQ 364
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
C CNP GS++ CD + GR + V K RC+
Sbjct: 365 PCNCNPLGSIQQ--QCDPL------------GRCQCKPGVGGDK-----------CDRCQ 399
Query: 163 RDTYPLGHGGSLNLQCNSEG-------------RCQCKPGVTGDKCDRCDVNHYDFGE-- 207
+ L G C+S G +CQCK V G +CDRC +++
Sbjct: 400 DGHFGLSEAGCRQCSCDSAGTVNNAGACDQVTGQCQCKQNVEGPRCDRCKPGYFNLDSTN 459
Query: 208 -AGCKSCEC 215
+GC SC C
Sbjct: 460 PSGCISCFC 468
>gi|411147409|ref|NP_001258644.1| laminin subunit gamma-1 precursor [Sus scrofa]
Length = 1608
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 89/125 (71%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DGPNCE+CR+NY++ C+ C+C+
Sbjct: 341 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGPNCERCRENYFRLGNREACSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC ++ EAGC+ C CNP+GS T C+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGS---TDECNV 457
Query: 121 VKGQC 125
G+C
Sbjct: 458 ETGRC 462
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 113/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 791 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 846
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C+CNP G+VK +C+ V GQCE
Sbjct: 847 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQCEC 906
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + CKR + + LG S N QC+ G+
Sbjct: 907 LP-----------HVTGRDCGACDPGFYNLQSGQGCKRCECHALG---STNGQCDVHTGQ 952
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P G++ D G+CEC++ G
Sbjct: 953 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGALSLQCKDD---GRCECREGFVGN 1009
Query: 244 QC 245
+C
Sbjct: 1010 RC 1011
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGH-----------GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC ++ EA
Sbjct: 380 RCRENYFRLGNREACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEA 439
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP+GS T C+ G+C CKDNVEG C
Sbjct: 440 GCRPCSCNPSGS---TDECNVETGRCVCKDNVEGFNC 473
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 103/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q CN G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GCK CEC+ GS CD GQCE Q G+
Sbjct: 906 CLPHVTGRDCGACDPGFYNLQSGQGCKRCECHALGSTNG--QCDVHTGQCE-CQPGITGQ 962
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P G+L+LQC +GRC+C+ G G++
Sbjct: 963 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGALSLQCKDDGRCECREGFVGNR 1010
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1011 CDQCEENYFYNRSWPGCQEC 1030
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 112/260 (43%), Gaps = 33/260 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 723 CTCNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTVGTSSDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
NC+ + G+C ++ G R + +P D +CK D P
Sbjct: 832 NIDPNAVGNCNRLTGECLKCIYNTAGFYCD--RCKDGFFGNPLAPNPAD--KCKACDCNP 887
Query: 168 LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 225
G + CN G+C+C P VTG C CD Y+ GCK CEC+ GS
Sbjct: 888 YGTVKQQS-SCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCKRCECHALGSTNG-- 944
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 945 QCDVHTGQCECQPGITGQHC 964
>gi|345802893|ref|XP_537156.3| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1 isoform 1
[Canis lupus familiaris]
Length = 1592
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 84/112 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQG+ DG NCE+CR+N+++ C+ C+C+
Sbjct: 325 CDCNGRSQECYFDPELYRSTGHGGHCTNCQGNTDGANCERCRENFFRLVSHEACSPCHCS 384
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV G+KCDRC ++ EAGC+ C CNPAGS+
Sbjct: 385 PVGSLSTQCDSYGRCSCKPGVMGEKCDRCQPGYHSLTEAGCRPCSCNPAGSI 436
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 110/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 775 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 830
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A C++C CNP G+VK +C+ V GQCE
Sbjct: 831 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACACNPYGTVKQQSSCNPVTGQCEC 890
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 891 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 936
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+ C+VNH+ FG GCK C+C+P GSV D G+CECK G
Sbjct: 937 CECQPGITGQHCEHCEVNHFGFGPEGCKPCDCHPEGSVSLQCKDD---GRCECKQGFVGN 993
Query: 244 QC 245
+C
Sbjct: 994 RC 995
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC+S GRC CKPGV G+KCDRC ++ EAGC+ C CNPAGS+ C+
Sbjct: 387 GSLSTQCDSYGRCSCKPGVMGEKCDRCQPGYHSLTEAGCRPCSCNPAGSID---ECNVET 443
Query: 232 GQCECKDNVEGAQC 245
G+C CKDNVEG C
Sbjct: 444 GRCVCKDNVEGFNC 457
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 103/201 (51%), Gaps = 27/201 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC CNP G++ Q CN G+C+
Sbjct: 830 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACACNPYGTVKQQSSCNPVTGQCE 889
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRG 134
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE ++ +
Sbjct: 890 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCECQPGITGQH 947
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
H E+ + F P G CK D +P GS++LQC +GRC+CK G G+
Sbjct: 948 CEHCEV---NHFGFGPEG--------CKPCDCHP---EGSVSLQCKDDGRCECKQGFVGN 993
Query: 194 KCDRCDVNH-YDFGEAGCKSC 213
+CD+C+ N+ Y+ GC+ C
Sbjct: 994 RCDQCEENYFYNRSWPGCQEC 1014
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 112/261 (42%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C DC+ + GP+CEKC D YY S + C C
Sbjct: 707 CTCNGHSETC--DPET-------GVC-DCRDNTAGPHCEKCSDGYYGDSTTGSSSDCQPC 756
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 757 PC-PGGSSCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 815
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ + G+C ++ G + N A N R C + Y
Sbjct: 816 NIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGN-PLAPNPADKCRACACNPY-- 872
Query: 169 GHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G++ Q CN G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 873 ---GTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG- 928
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 929 -QCDIRTGQCECQPGITGQHC 948
>gi|301777001|ref|XP_002923925.1| PREDICTED: laminin subunit gamma-1-like [Ailuropoda melanoleuca]
Length = 1653
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 84/112 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S C+FD ELY TGHGGHC +CQG+ DG NCE+CR+N+++ + C+ C+C+
Sbjct: 386 CECNGQSQECYFDPELYRSTGHGGHCTNCQGNTDGANCERCRENFFRLGNNEACSPCHCS 445
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC ++ EAGC+ C CNP+GS+
Sbjct: 446 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSI 497
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC ++ EA
Sbjct: 425 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEA 484
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP+GS+ C+ G+C CKDNVEG C
Sbjct: 485 GCRPCSCNPSGSID---ECNVETGRCVCKDNVEGFNC 518
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 108/242 (44%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C C G CE C D Y+ G+N C C CN N+ N+ G C
Sbjct: 836 CTSCPTGTTGKRCELCDDGYFGDPLGENGPVRLCRLCQCND----NIDPNAVGNCNRLTG 891
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C C+P G+ K C+ V GQCE
Sbjct: 892 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACACSPYGTAKQQSGCNPVTGQCEC 951
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S + QC+ G+
Sbjct: 952 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STSGQCDIRTGQ 997
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PGVTG C+RC+VNH+ FG GCK C+C+ GS+ D G+CECK G
Sbjct: 998 CECQPGVTGQHCERCEVNHFGFGPEGCKPCDCHSEGSLSLQCKDD---GRCECKQGFVGN 1054
Query: 244 QC 245
+C
Sbjct: 1055 RC 1056
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 100/199 (50%), Gaps = 23/199 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC C+P G+ Q CN G+C+
Sbjct: 891 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACACSPYGTAKQQSGCNPVTGQCE 950
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 951 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTSG--QCDIRTGQCE-CQPGVTGQ 1007
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D C + GSL+LQC +GRC+CK G G++C
Sbjct: 1008 -HCERCEVNHFGFGPEGCKPCD---CHSE-------GSLSLQCKDDGRCECKQGFVGNRC 1056
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 1057 DQCEENYFYNRSWPGCQEC 1075
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 111/260 (42%), Gaps = 33/260 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG S C D E G C DC+ + GP+CE+C D YY + C C
Sbjct: 768 CTCNGHSETC--DPET-------GVC-DCRDNTAGPHCERCGDGYYGDSTSGSSSDCQPC 817
Query: 58 NCNPIGS--LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ GE G C+ C+CN
Sbjct: 818 PC-PGGSSCAVVPKTQEVVCTSCPTGTTGKRCELCDDGYFGDPLGENGPVRLCRLCQCND 876
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
NC+ + G+C ++ G R + +P D +CK P
Sbjct: 877 NIDPNAVGNCNRLTGECLKCIYNTAGFYCD--RCKDGFFGNPLAPNPAD--KCKACACSP 932
Query: 168 LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 225
G + CN G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 933 YGTAKQQS-GCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTSG-- 989
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ V G C
Sbjct: 990 QCDIRTGQCECQPGVTGQHC 1009
>gi|27545305|ref|NP_775384.1| laminin subunit gamma-1 precursor [Danio rerio]
gi|21538977|gb|AAM61766.1|AF468048_1 laminin gamma 1 [Danio rerio]
Length = 1593
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S C+FD ELY TGHGGHC +C + DGP CE+C NYY+++ C +C CN
Sbjct: 326 CNCNGKSAECYFDPELYRATGHGGHCRNCADNTDGPKCERCLANYYREASGQRCLSCGCN 385
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC++ GRC CKPGV GDKCDRC ++ EAGC+ C CNPAGS T CD
Sbjct: 386 PVGSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHSLSEAGCRPCSCNPAGS---TQECDV 442
Query: 121 VKGQCE 126
G+C+
Sbjct: 443 QTGRCQ 448
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC++ GRC CKPGV GDKCDRC ++ EAGC+ C CNPAGS T CD
Sbjct: 388 GSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHSLSEAGCRPCSCNPAGS---TQECDVQT 444
Query: 232 GQCECKDNVEGAQC 245
G+C+CK+NV+G C
Sbjct: 445 GRCQCKENVDGFNC 458
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 77/179 (43%), Gaps = 64/179 (35%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYD 95
+C C +Y C CNCNPIGS N QC+ G+C+C+PGVTG C+RC+VN +
Sbjct: 899 DCGACELGFYNLQSGKGCERCNCNPIGSTNGQCDIVSGQCECQPGVTGQHCERCEVNFFG 958
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
F +GCK C+C+P GS ESAQ
Sbjct: 959 FSSSGCKPCDCDPEGS--------------ESAQ-------------------------- 978
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH-YDFGEAGCKSC 213
CK D GRC C+PG G +CD C+ N+ Y+ GC+ C
Sbjct: 979 -----CKED-----------------GRCHCRPGFVGSRCDMCEENYFYNRSTPGCQQC 1015
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 105/250 (42%), Gaps = 59/250 (23%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D ++ +K C AC+CN N++ N+ G C
Sbjct: 776 CTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNN----NIEPNAVGNCNRESG 831
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC Y A CK C+C+P G+V C V GQC
Sbjct: 832 ECLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQTACSQVTGQCPC 891
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNL 176
NR D C+ Y L G GS N
Sbjct: 892 --------------------LPHVINR--DCGACELGFYNLQSGKGCERCNCNPIGSTNG 929
Query: 177 QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
QC+ G+C+C+PGVTG C+RC+VN + F +GCK C+C+P GS + C G+C
Sbjct: 930 QCDIVSGQCECQPGVTGQHCERCEVNFFGFSSSGCKPCDCDPEGS--ESAQCKE-DGRCH 986
Query: 236 CKDNVEGAQC 245
C+ G++C
Sbjct: 987 CRPGFVGSRC 996
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 113/261 (43%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
CNCNG S+ C D E G C +CQ + G +CE+C+D +Y S + C AC
Sbjct: 708 CNCNGHSDTC--DPET-------GMC-NCQHNTAGLSCERCKDGFYGDSTVGSSSDCKAC 757
Query: 58 NCNPIG---SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P G ++ + N C G TG +C+ CD + GE G C++C CN
Sbjct: 758 PC-PAGATCAVVPKTNEVVCTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNN 816
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ G+C ++ G V + Q A N + CK Y
Sbjct: 817 NIEPNAVGNCNRESGECLKCIYNTAG-VFCDRCKQGFYGDARAANVADKCKPCKCSPY-- 873
Query: 169 GHGGSLNLQC---NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G+++ Q G+C C P V C C++ Y+ GC+ C CNP GS
Sbjct: 874 ---GTVDRQTACSQVTGQCPCLPHVINRDCGACELGFYNLQSGKGCERCNCNPIGSTNG- 929
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD V GQCEC+ V G C
Sbjct: 930 -QCDIVSGQCECQPGVTGQHC 949
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C +CQ G +CE+C N++ S C C+C+P GS + QC +GRC C+PG G
Sbjct: 936 GQC-ECQPGVTGQHCERCEVNFFGFSSSG-CKPCDCDPEGSESAQCKEDGRCHCRPGFVG 993
Query: 84 DKCDRCDVNH-YDFGEAGCKSC 104
+CD C+ N+ Y+ GC+ C
Sbjct: 994 SRCDMCEENYFYNRSTPGCQQC 1015
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 89/249 (35%), Gaps = 68/249 (27%)
Query: 35 GPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDR 88
G +CE+C D +++S C CNCN C+ E G C C+ G C+R
Sbjct: 682 GQHCEQC-DQGFRRSRPELRRFSTCERCNCNGHSD---TCDPETGMCNCQHNTAGLSCER 737
Query: 89 CDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
C Y G CK+C C + P + V C + + G
Sbjct: 738 CKDGFYGDSTVGSSSDCKACPCPAGATCAVVPKTNEV--VCTNCPTGTTG---------- 785
Query: 145 RKNFDPAGNRIWDLRRCKR--DTY---PLGHGGSL----------NLQCNSEGRC----- 184
+RC+ D + PLG G + N++ N+ G C
Sbjct: 786 --------------KRCELCDDGFFGDPLGEKGPVRACRACSCNNNIEPNAVGNCNRESG 831
Query: 185 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCEC 236
+C G CDRC Y A CK C+C+P G+V C V GQC C
Sbjct: 832 ECLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQTACSQVTGQCPC 891
Query: 237 KDNVEGAQC 245
+V C
Sbjct: 892 LPHVINRDC 900
>gi|224493177|sp|Q1LVF0.2|LAMC1_DANRE RecName: Full=Laminin subunit gamma-1; Flags: Precursor
Length = 1593
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S C+FD ELY TGHGGHC +C + DGP CE+C NYY+++ C +C CN
Sbjct: 326 CNCNGKSAECYFDPELYRATGHGGHCRNCADNTDGPKCERCLANYYREASGQRCLSCGCN 385
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC++ GRC CKPGV GDKCDRC ++ EAGC+ C CNPAGS T CD
Sbjct: 386 PVGSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHSLSEAGCRPCSCNPAGS---TQECDV 442
Query: 121 VKGQCE 126
G+C+
Sbjct: 443 QTGRCQ 448
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC++ GRC CKPGV GDKCDRC ++ EAGC+ C CNPAGS T CD
Sbjct: 388 GSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHSLSEAGCRPCSCNPAGS---TQECDVQT 444
Query: 232 GQCECKDNVEGAQC 245
G+C+CK+NV+G C
Sbjct: 445 GRCQCKENVDGFNC 458
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 77/179 (43%), Gaps = 64/179 (35%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYD 95
+C C +Y C CNCNPIGS N QC+ G+C+C+PGVTG C+RC+VN +
Sbjct: 899 DCGACELGFYNLQSGKGCERCNCNPIGSTNGQCDIVSGQCECQPGVTGQHCERCEVNFFG 958
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
F +GCK C+C+P GS ESAQ
Sbjct: 959 FSSSGCKPCDCDPEGS--------------ESAQ-------------------------- 978
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH-YDFGEAGCKSC 213
CK D GRC C+PG G +CD C+ N+ Y+ GC+ C
Sbjct: 979 -----CKED-----------------GRCHCRPGFVGSRCDMCEENYFYNRSTPGCQQC 1015
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 104/250 (41%), Gaps = 59/250 (23%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D ++ +K C AC+CN N+ N+ G C
Sbjct: 776 CTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNN----NIDPNAVGNCNRESG 831
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC Y A CK C+C+P G+V C V GQC
Sbjct: 832 ECLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQTACSQVTGQCPC 891
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNL 176
NR D C+ Y L G GS N
Sbjct: 892 --------------------LPHVINR--DCGACELGFYNLQSGKGCERCNCNPIGSTNG 929
Query: 177 QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
QC+ G+C+C+PGVTG C+RC+VN + F +GCK C+C+P GS + C G+C
Sbjct: 930 QCDIVSGQCECQPGVTGQHCERCEVNFFGFSSSGCKPCDCDPEGS--ESAQCKE-DGRCH 986
Query: 236 CKDNVEGAQC 245
C+ G++C
Sbjct: 987 CRPGFVGSRC 996
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 113/261 (43%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
CNCNG S+ C D E G C +CQ + G +CE+C+D +Y S + C AC
Sbjct: 708 CNCNGHSDTC--DPET-------GMC-NCQHNTAGLSCERCKDGFYGDSTVGSSSDCKAC 757
Query: 58 NCNPIG---SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P G ++ + N C G TG +C+ CD + GE G C++C CN
Sbjct: 758 PC-PAGATCAVVPKTNEVVCTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNN 816
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ G+C ++ G V + Q A N + CK Y
Sbjct: 817 NIDPNAVGNCNRESGECLKCIYNTAG-VFCDRCKQGFYGDARAANVADKCKPCKCSPY-- 873
Query: 169 GHGGSLNLQC---NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G+++ Q G+C C P V C C++ Y+ GC+ C CNP GS
Sbjct: 874 ---GTVDRQTACSQVTGQCPCLPHVINRDCGACELGFYNLQSGKGCERCNCNPIGSTNG- 929
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD V GQCEC+ V G C
Sbjct: 930 -QCDIVSGQCECQPGVTGQHC 949
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C +CQ G +CE+C N++ S C C+C+P GS + QC +GRC C+PG G
Sbjct: 936 GQC-ECQPGVTGQHCERCEVNFFGFSSSG-CKPCDCDPEGSESAQCKEDGRCHCRPGFVG 993
Query: 84 DKCDRCDVNH-YDFGEAGCKSC 104
+CD C+ N+ Y+ GC+ C
Sbjct: 994 SRCDMCEENYFYNRSTPGCQQC 1015
>gi|281337825|gb|EFB13409.1| hypothetical protein PANDA_013144 [Ailuropoda melanoleuca]
Length = 1580
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 84/112 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S C+FD ELY TGHGGHC +CQG+ DG NCE+CR+N+++ + C+ C+C+
Sbjct: 313 CECNGQSQECYFDPELYRSTGHGGHCTNCQGNTDGANCERCRENFFRLGNNEACSPCHCS 372
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC ++ EAGC+ C CNP+GS+
Sbjct: 373 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSI 424
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC ++ EA
Sbjct: 352 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEA 411
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP+GS+ C+ G+C CKDNVEG C
Sbjct: 412 GCRPCSCNPSGSID---ECNVETGRCVCKDNVEGFNC 445
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 108/242 (44%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C C G CE C D Y+ G+N C C CN N+ N+ G C
Sbjct: 763 CTSCPTGTTGKRCELCDDGYFGDPLGENGPVRLCRLCQCND----NIDPNAVGNCNRLTG 818
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C C+P G+ K C+ V GQCE
Sbjct: 819 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACACSPYGTAKQQSGCNPVTGQCEC 878
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S + QC+ G+
Sbjct: 879 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STSGQCDIRTGQ 924
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PGVTG C+RC+VNH+ FG GCK C+C+ GS+ D G+CECK G
Sbjct: 925 CECQPGVTGQHCERCEVNHFGFGPEGCKPCDCHSEGSLSLQCKDD---GRCECKQGFVGN 981
Query: 244 QC 245
+C
Sbjct: 982 RC 983
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 100/199 (50%), Gaps = 23/199 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC C+P G+ Q CN G+C+
Sbjct: 818 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACACSPYGTAKQQSGCNPVTGQCE 877
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 878 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTSG--QCDIRTGQCE-CQPGVTGQ 934
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D C + GSL+LQC +GRC+CK G G++C
Sbjct: 935 -HCERCEVNHFGFGPEGCKPCD---CHSE-------GSLSLQCKDDGRCECKQGFVGNRC 983
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 984 DQCEENYFYNRSWPGCQEC 1002
>gi|319996723|ref|NP_001188452.1| laminin gamma-1 precursor [Oryzias latipes]
gi|300793580|dbj|BAJ11755.1| laminin gamma-1 [Oryzias latipes]
Length = 1595
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S C+FD ELY TGHGGHC +C + DGPNCE+C DNYY+ N C C+C+
Sbjct: 328 CNCNGKSAECYFDPELYRATGHGGHCRNCADNTDGPNCERCLDNYYRDQSGNRCQPCSCS 387
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
PIGSL+ QC+ G C CKPGVTG+KCDRC ++ EAGC+ C C+PAGS T CD
Sbjct: 388 PIGSLSPQCDRGGVCACKPGVTGEKCDRCLPGYHSLTEAGCRQCSCSPAGS---TQECDV 444
Query: 121 VKGQC 125
GQC
Sbjct: 445 ATGQC 449
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC+ G C CKPGVTG+KCDRC ++ EAGC+ C C+PAGS T CD
Sbjct: 390 GSLSPQCDRGGVCACKPGVTGEKCDRCLPGYHSLTEAGCRQCSCSPAGS---TQECDVAT 446
Query: 232 GQCECKDNVEGAQC 245
GQC CK+NVEG C
Sbjct: 447 GQCRCKENVEGFSC 460
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN----FCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C D +G C++C++ +Y + C +C+C+P G++ Q + G+C+
Sbjct: 833 GECLKCVNDTEGFFCDRCKEGFYGNALSTGPGKRCKSCSCSPFGTVGQQTSCSEVTGQCE 892
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V C C H++ GC+ C CNP GS CD V GQCE Q G
Sbjct: 893 CLPNVAERDCSACQPGHFNLQSGKGCERCNCNPIGSTNG--QCDIVTGQCE-CQPGVSG- 948
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+H + + F +G + D C + GS + QC +GRCQC+PG G +C
Sbjct: 949 LHCDRCEVNFFGFSSSGCKPCD---CDSE-------GSSSGQCKDDGRCQCRPGFVGARC 998
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D C+ N+ Y+ GC+ C
Sbjct: 999 DMCEENYFYNRSVPGCQQC 1017
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 106/238 (44%), Gaps = 35/238 (14%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNL--QCNSE-GRC-Q 76
C +C G CE C D ++ Q C C C+ LN CN E G C +
Sbjct: 778 CTNCPTGTTGKRCELCDDGHFGDPLGQNGPVRSCHKCMCSGNIDLNAVGNCNRETGECLK 837
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C G CDRC Y + CKSC C+P G+V +C V GQCE
Sbjct: 838 CVNDTEGFFCDRCKEGFYGNALSTGPGKRCKSCSCSPFGTVGQQTSCSEVTGQCECLP-- 895
Query: 132 SRGRVHTELRVQSR--KNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCK 187
V R P + + C+R + P+G S N QC+ G+C+C+
Sbjct: 896 ---------NVAERDCSACQPGHFNLQSGKGCERCNCNPIG---STNGQCDIVTGQCECQ 943
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
PGV+G CDRC+VN + F +GCK C+C+ GS D G+C+C+ GA+C
Sbjct: 944 PGVSGLHCDRCEVNFFGFSSSGCKPCDCDSEGSSSGQCKDD---GRCQCRPGFVGARC 998
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 105/259 (40%), Gaps = 31/259 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C+CNG S+ C G C DCQ + G +CE+C+D +Y + N C C
Sbjct: 710 CSCNGHSDAC---------NPVTGAC-DCQDNTAGLSCERCKDGFYGDATQGSPNDCQPC 759
Query: 58 NCNPIGSL--NLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P G+ + E C C G TG +C+ CD H+ G+ G C C C+
Sbjct: 760 PC-PGGATCAIVPSTREVVCTNCPTGTTGKRCELCDDGHFGDPLGQNGPVRSCHKCMCSG 818
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
+ NC+ G+C + G + N G +RCK P
Sbjct: 819 NIDLNAVGNCNRETGECLKCVNDTEGFFCDRCKEGFYGNALSTGPG----KRCKSCSCSP 874
Query: 168 LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPN 226
G G G+C+C P V C C H++ GC+ C CNP GS
Sbjct: 875 FGTVGQQTSCSEVTGQCECLPNVAERDCSACQPGHFNLQSGKGCERCNCNPIGSTNG--Q 932
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD V GQCEC+ V G C
Sbjct: 933 CDIVTGQCECQPGVSGLHC 951
>gi|392926425|ref|NP_509204.3| Protein LAM-2 [Caenorhabditis elegans]
gi|347595792|sp|Q18823.3|LAM2_CAEEL RecName: Full=Laminin-like protein lam-2; Flags: Precursor
gi|351058990|emb|CCD66855.1| Protein LAM-2 [Caenorhabditis elegans]
Length = 1633
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 88/116 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ SNRC+FD++L+ TGHGGHC+DCQG+ G +CE+C N++++ G+N+C AC CN
Sbjct: 347 CNCSQLSNRCYFDQQLFEETGHGGHCIDCQGNTQGVHCEQCIANHWRRPGENYCVACGCN 406
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
IGSL+ QC++EG+CQCKPGVTG CD+C YDF GCK+C C +GS+ N P
Sbjct: 407 EIGSLSTQCDNEGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKNCGCETSGSLNNQP 462
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC++EG+CQCKPGVTG CD+C YDF GCK+C C +GS+ N P CDS
Sbjct: 409 GSLSTQCDNEGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKNCGCETSGSLNNQPRCDSSS 468
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 469 GSCSCKLNVEGRQC 482
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C DC + G C++C +Y + C CNC+P+GS C+ + G+CQCKPGVT
Sbjct: 914 GQC-DCLPNVIGIQCDQCAHGFYNITSGLGCQECNCDPLGSEGNTCDVNTGQCQCKPGVT 972
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +CDRC H+ F GC+ C+C GS CD GQC
Sbjct: 973 GQRCDRCADYHFGFSANGCQPCDCEYIGS--ENQQCDVNSGQC 1013
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKPGVTG +CDRC H+ F GC+ C+C GS CD GQC CK+NVE
Sbjct: 963 GQCQCKPGVTGQRCDRCADYHFGFSANGCQPCDCEYIGS--ENQQCDVNSGQCLCKENVE 1020
Query: 242 GAQC 245
G +C
Sbjct: 1021 GRRC 1024
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 90/220 (40%), Gaps = 60/220 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN-------LQCN 70
G C C + G NCE C+ Y+ GD C +C C G+ L+CN
Sbjct: 854 GECKKCIFNTHGFNCENCKPGYW---GDALIEPKGNCQSCGCFAAGTRRPNNDYTLLECN 910
Query: 71 SE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
+ G+C C P V G +CD+C Y+ GC+ C C+P GS NT CD GQC+
Sbjct: 911 QQDGQCDCLPNVIGIQCDQCAHGFYNITSGLGCQECNCDPLGSEGNT--CDVNTGQCQCK 968
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLG------------HGGSLN 175
+ +RC R Y G + GS N
Sbjct: 969 PGVTG-------------------------QRCDRCADYHFGFSANGCQPCDCEYIGSEN 1003
Query: 176 LQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
QC+ + G+C CK V G +CD+C N Y + GC C+
Sbjct: 1004 QQCDVNSGQCLCKENVEGRRCDQCAENRYGITQ-GCLPCD 1042
>gi|327277417|ref|XP_003223461.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1-like
[Anolis carolinensis]
Length = 1602
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S C+FD ELY TGHGGHC C G+ DGPNC++CR+N+Y+ + C CNCN
Sbjct: 336 CNCNGRSQECYFDPELYRSTGHGGHCTGCFGNTDGPNCQRCRENFYRLGSEEVCLPCNCN 395
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC++ GRC CK GV GDKCDRC + EAGC+ C C+PAGS T C+
Sbjct: 396 PVGSLSTQCDNYGRCSCKAGVMGDKCDRCQPGFHSLTEAGCRRCSCDPAGS---TDECNM 452
Query: 121 VKGQC 125
G+C
Sbjct: 453 ETGRC 457
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 113/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N FC C C S N+ N+ G C
Sbjct: 785 CTNCPAGTTGKRCELCDDGYFGDPLGTNGPARFCRLCQC----SDNIDPNAVGNCNRLTG 840
Query: 76 ---QCKPGVTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC Y E CK+C CNP G++ +C V GQCE
Sbjct: 841 ECLKCIYNTAGFYCDRCKDGFYGNPLAQNPEDKCKACNCNPYGTMNVQTSCSQVTGQCEC 900
Query: 128 AQLSSRGRVHTELRVQSR--KNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R + +P + R C+R D +PLG S N C+ + G+
Sbjct: 901 LP-----------HVTERDCSSCEPGFYNLQSGRGCERCDCHPLG---STNGHCDIQTGQ 946
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG +C+RC+ NH+ FG GCK C+C+P GS + C G+CECK+ G
Sbjct: 947 CECQPGITGQRCERCEANHFGFGREGCKPCDCDPEGS--RSLQCKD-DGRCECKEGFVGN 1003
Query: 244 QC 245
+C
Sbjct: 1004 RC 1005
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 43/209 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C + G C++C+D +Y ++ ++ C ACNCNP G++N+Q + G+C+
Sbjct: 840 GECLKCIYNTAGFYCDRCKDGFYGNPLAQNPEDKCKACNCNPYGTMNVQTSCSQVTGQCE 899
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VT C C+ Y+ GC+ C+C+P GS +CD GQCE + R
Sbjct: 900 CLPHVTERDCSSCEPGFYNLQSGRGCERCDCHPLGSTNG--HCDIQTGQCECQPGITGQR 957
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSEGRCQ 185
RC+ + + G G S +LQC +GRC+
Sbjct: 958 CE----------------------RCEANHFGFGREGCKPCDCDPEGSRSLQCKDDGRCE 995
Query: 186 CKPGVTGDKCDRCDVNH-YDFGEAGCKSC 213
CK G G++CD+C+ N+ Y+ GC+ C
Sbjct: 996 CKEGFVGNRCDQCEENYFYNRSWPGCQEC 1024
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 57/98 (58%), Gaps = 14/98 (14%)
Query: 159 RRCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
+RC+ + Y LG GSL+ QC++ GRC CK GV GDKCDRC + E
Sbjct: 374 QRCRENFYRLGSEEVCLPCNCNPVGSLSTQCDNYGRCSCKAGVMGDKCDRCQPGFHSLTE 433
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AGC+ C C+PAGS T C+ G+C CKD+VEG C
Sbjct: 434 AGCRRCSCDPAGS---TDECNMETGRCTCKDSVEGFNC 468
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 92/251 (36%), Gaps = 68/251 (27%)
Query: 35 GPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE+C D Y +++ + C C CN + CN E G C C+ G C++C
Sbjct: 691 GQFCEQCADGYRRETPSLGPYSPCVPCFCN---GHSETCNPETGACNCRDNTAGPHCEKC 747
Query: 90 DVNHYDFGEAG----CKSCECNPAGSV-KNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
+Y G C+ C C P GS P V C + + G+
Sbjct: 748 SDGYYGDATTGTSSDCQPCPC-PGGSTCAIVPKTKEVV--CTNCPAGTTGK--------- 795
Query: 145 RKNFDPAGNRIWDLRRCKR--DTY---PLGHGG----------SLNLQCNSEGRC----- 184
RC+ D Y PLG G S N+ N+ G C
Sbjct: 796 ---------------RCELCDDGYFGDPLGTNGPARFCRLCQCSDNIDPNAVGNCNRLTG 840
Query: 185 ---QCKPGVTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+C G CDRC Y E CK+C CNP G++ +C V GQCEC
Sbjct: 841 ECLKCIYNTAGFYCDRCKDGFYGNPLAQNPEDKCKACNCNPYGTMNVQTSCSQVTGQCEC 900
Query: 237 KDNVEGAQCRS 247
+V C S
Sbjct: 901 LPHVTERDCSS 911
>gi|46250390|gb|AAH68426.1| Lamc1 protein [Danio rerio]
Length = 1021
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S C+FD ELY TGHGGHC +C + DGP CE+C NYY+++ C +C CN
Sbjct: 135 CNCNGKSAECYFDPELYRATGHGGHCRNCADNTDGPKCERCLANYYREASGQRCLSCGCN 194
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC++ GRC CKPGV GDKCDRC ++ EAGC+ C CNPAGS T CD
Sbjct: 195 PVGSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHSLSEAGCRPCSCNPAGS---TQECDV 251
Query: 121 VKGQCE 126
G+C+
Sbjct: 252 QTGRCQ 257
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC++ GRC CKPGV GDKCDRC ++ EAGC+ C CNPAGS T CD
Sbjct: 197 GSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHSLSEAGCRPCSCNPAGS---TQECDVQT 253
Query: 232 GQCECKDNVEGAQC 245
G+C+CK+NV+G C
Sbjct: 254 GRCQCKENVDGFNC 267
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 77/179 (43%), Gaps = 64/179 (35%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYD 95
+C C +Y C CNCNPIGS N QC+ G+C+C+PGVTG C+RC+VN +
Sbjct: 708 DCGACELGFYNLQSGKGCERCNCNPIGSTNGQCDIVSGQCECQPGVTGQHCERCEVNFFG 767
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
F +GCK C+C+P GS ESAQ
Sbjct: 768 FSSSGCKPCDCDPEGS--------------ESAQ-------------------------- 787
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH-YDFGEAGCKSC 213
CK D GRC C+PG G +CD C+ N+ Y+ GC+ C
Sbjct: 788 -----CKED-----------------GRCHCRPGFVGSRCDMCEENYFYNRSTPGCQQC 824
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 111/244 (45%), Gaps = 47/244 (19%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D ++ +K C AC+CN N+ N+ G C
Sbjct: 585 CTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNN----NIDPNAVGNCNRESG 640
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCE- 126
+C G CDRC Y A CK C+C+P G+V C V GQC
Sbjct: 641 ECLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQTACSQVTGQCPC 700
Query: 127 SAQLSSRGRVHTEL---RVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SE 181
+ +R EL +QS K C+R + P+G S N QC+
Sbjct: 701 LPHVINRDCGACELGFYNLQSGKG-------------CERCNCNPIG---STNGQCDIVS 744
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+PGVTG C+RC+VN + F +GCK C+C+P GS + C G+C C+
Sbjct: 745 GQCECQPGVTGQHCERCEVNFFGFSSSGCKPCDCDPEGS--ESAQCKE-DGRCHCRPGFV 801
Query: 242 GAQC 245
G++C
Sbjct: 802 GSRC 805
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 113/261 (43%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
CNCNG S+ C D E G C +CQ + G +CE+C+D +Y S + C AC
Sbjct: 517 CNCNGHSDTC--DPET-------GMC-NCQHNTAGLSCERCKDGFYGDSTVGSSSDCKAC 566
Query: 58 NCNPIG---SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P G ++ + N C G TG +C+ CD + GE G C++C CN
Sbjct: 567 PC-PAGATCAVVPKTNEVVCTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNN 625
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ G+C ++ G V + Q A N + CK Y
Sbjct: 626 NIDPNAVGNCNRESGECLKCIYNTAG-VFCDRCKQGFYGDARAANVADKCKPCKCSPY-- 682
Query: 169 GHGGSLNLQC---NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G+++ Q G+C C P V C C++ Y+ GC+ C CNP GS
Sbjct: 683 ---GTVDRQTACSQVTGQCPCLPHVINRDCGACELGFYNLQSGKGCERCNCNPIGSTNG- 738
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD V GQCEC+ V G C
Sbjct: 739 -QCDIVSGQCECQPGVTGQHC 758
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G +CE+C N++ S C C+C+P GS + QC +GRC C+PG G +CD
Sbjct: 748 ECQPGVTGQHCERCEVNFFGFSSSG-CKPCDCDPEGSESAQCKEDGRCHCRPGFVGSRCD 806
Query: 88 RCDVNH-YDFGEAGCKSC 104
C+ N+ Y+ GC+ C
Sbjct: 807 MCEENYFYNRSTPGCQQC 824
>gi|410986032|ref|XP_003999316.1| PREDICTED: laminin subunit gamma-1 [Felis catus]
Length = 1515
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 84/112 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQG+ DG CE+CR+N+++ + C+ C+C+
Sbjct: 248 CDCNGRSQECYFDPELYRSTGHGGHCTNCQGNTDGAKCERCRENFFRLGNNEACSPCHCS 307
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC ++ EAGC+ C CNP+GS+
Sbjct: 308 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSI 359
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 112/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 698 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 753
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C+C+P G+VK C+ V GQCE
Sbjct: 754 ECLKCIYNTAGFYCDRCKDGFFGNALAPNPADKCKACDCHPYGTVKQQRGCNPVTGQCEC 813
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 814 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRSGQ 859
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 860 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 916
Query: 244 QC 245
+C
Sbjct: 917 RC 918
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC ++ EA
Sbjct: 287 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEA 346
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP+GS+ C+ G+C CKDNVEG C
Sbjct: 347 GCRPCSCNPSGSID---ECNVETGRCVCKDNVEGFNC 380
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 103/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+C+P G++ Q CN G+C+
Sbjct: 753 GECLKCIYNTAGFYCDRCKDGFFGNALAPNPADKCKACDCHPYGTVKQQRGCNPVTGQCE 812
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 813 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRSGQCE-CQPGITGQ 869
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 870 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 917
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 918 CDQCEENYFYNRSRPGCQEC 937
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 116/267 (43%), Gaps = 47/267 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 630 CTCNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCGDGYYGDSTAGTSSDCQPC 679
Query: 58 NCNPIGSLNLQCNSEGRCQ------CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCE 105
C P GS C + Q C G TG +C+ CD ++ G G C+ C+
Sbjct: 680 PC-PGGS---SCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQ 735
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW--DLRRCKR 163
CN NC+ + G+C ++ G + + F GN + +CK
Sbjct: 736 CNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCD----RCKDGF--FGNALAPNPADKCKA 789
Query: 164 -DTYPLGHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPA 218
D +P G++ Q CN G+C+C P VTG C CD Y+ GC+ C+C+
Sbjct: 790 CDCHPY---GTVKQQRGCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHAL 846
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS CD GQCEC+ + G C
Sbjct: 847 GSTNG--QCDIRSGQCECQPGITGQHC 871
>gi|348543037|ref|XP_003458990.1| PREDICTED: laminin subunit gamma-1-like [Oreochromis niloticus]
Length = 1596
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S C+FD ELY TGHGGHC +C + DGPNCE+C DNYY+ G + C C CN
Sbjct: 328 CECNGKSAECYFDAELYRATGHGGHCRNCADNTDGPNCERCLDNYYRDPGASRCLPCLCN 387
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS++ QC+ G C CKPGVTG+KCDRC H+ EAGC+ C C+P+GS T CD
Sbjct: 388 PVGSVSPQCDDRGMCACKPGVTGEKCDRCQPGHHSLTEAGCRQCSCSPSGS---TQECDV 444
Query: 121 VKGQC 125
GQC
Sbjct: 445 NTGQC 449
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS++ QC+ G C CKPGVTG+KCDRC H+ EAGC+ C C+P+GS T CD
Sbjct: 390 GSVSPQCDDRGMCACKPGVTGEKCDRCQPGHHSLTEAGCRQCSCSPSGS---TQECDVNT 446
Query: 232 GQCECKDNVEGAQC 245
GQC CKDNVEG C
Sbjct: 447 GQCRCKDNVEGFSC 460
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTG 83
CL +RD C C ++ N C CNCNPIGS N QC+ G+C+C+PGV G
Sbjct: 893 ECLPNVAERD---CSACIPGFFNLQSGNGCERCNCNPIGSTNGQCDIITGQCECQPGVAG 949
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
+C+RC+ N + F +GCK C+C+P GS+
Sbjct: 950 LRCERCETNFFGFSVSGCKPCDCDPEGSM 978
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ---CNSEGRCQ 76
G CL C + DG C++C++ +Y + C C C+P+G+ N Q G+C+
Sbjct: 834 GECLKCIYNTDGFFCDRCKEGFYGNALAPEPADKCKPCACSPLGTRNQQNSCSQGTGQCE 893
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V C C ++ GC+ C CNP GS CD + GQCE Q G
Sbjct: 894 CLPNVAERDCSACIPGFFNLQSGNGCERCNCNPIGSTNG--QCDIITGQCE-CQPGVAG- 949
Query: 136 VHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
LR + NF G + + C D GS+ QC +GRC+C+PG G +
Sbjct: 950 ----LRCERCETNF--FGFSVSGCKPCDCDPE-----GSMLGQCKEDGRCECRPGFVGAR 998
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD C+ N+ Y+ GC+ C
Sbjct: 999 CDMCEENYFYNRSVPGCQQC 1018
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 108/248 (43%), Gaps = 54/248 (21%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF---------CTACNCNPIGSLNLQCNSEGRC- 75
C +C G CE C D ++ GD C +C C S N+ N+ G C
Sbjct: 778 CTNCPTGTTGKRCELCDDGFF---GDPLGQNGGVVRTCRSCKC----SGNIDPNAVGNCN 830
Query: 76 -------QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 123
+C G CDRC Y A CK C C+P G+ +C G
Sbjct: 831 RENGECLKCIYNTDGFFCDRCKEGFYGNALAPEPADKCKPCACSPLGTRNQQNSCSQGTG 890
Query: 124 QCE----SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQC 178
QCE A+ + +QS GN C+R + P+G S N QC
Sbjct: 891 QCECLPNVAERDCSACIPGFFNLQS-------GNG------CERCNCNPIG---STNGQC 934
Query: 179 NS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+ G+C+C+PGV G +C+RC+ N + F +GCK C+C+P GS+ D G+CEC+
Sbjct: 935 DIITGQCECQPGVAGLRCERCETNFFGFSVSGCKPCDCDPEGSMLGQCKED---GRCECR 991
Query: 238 DNVEGAQC 245
GA+C
Sbjct: 992 PGFVGARC 999
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 106/278 (38%), Gaps = 68/278 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNFCT 55
CNCN S C + G C DCQ + G +CE+C+D +Y SGD C
Sbjct: 710 CNCNDHSETC---------DPNTGAC-DCQDNTAGLSCERCQDGFYGDATQGTSGD--CQ 757
Query: 56 ACNCNPIGSLNLQCNS-EGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG-----CKSCEC 106
C C P + + + E C C G TG +C+ CD + G+ G C+SC+C
Sbjct: 758 PCPCPPGATCAVVPRTREVVCTNCPTGTTGKRCELCDDGFFGDPLGQNGGVVRTCRSCKC 817
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ NC+ G+C ++ G + RCK Y
Sbjct: 818 SGNIDPNAVGNCNRENGECLKCIYNTDG---------------------FFCDRCKEGFY 856
Query: 167 ------------------PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
PLG N G+C+C P V C C ++
Sbjct: 857 GNALAPEPADKCKPCACSPLGTRNQQNSCSQGTGQCECLPNVAERDCSACIPGFFNLQSG 916
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP GS CD + GQCEC+ V G +C
Sbjct: 917 NGCERCNCNPIGSTNG--QCDIITGQCECQPGVAGLRC 952
>gi|156371064|ref|XP_001628586.1| predicted protein [Nematostella vectensis]
gi|156215566|gb|EDO36523.1| predicted protein [Nematostella vectensis]
Length = 1586
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 91/125 (72%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG + C FD+ LY +TGHGG C +C+ + DGPNCE+C++N+Y+K+ C AC CN
Sbjct: 324 CNCNGLAESCVFDEALYRQTGHGGRCQNCKQNTDGPNCERCKENFYRKTSLEPCVACGCN 383
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS++LQCNSEG+C+CKPGVTG KCD+C N++ F + GC+ C+C G+ C+
Sbjct: 384 PVGSVSLQCNSEGQCRCKPGVTGIKCDKCQANYFGFSQTGCRPCQCFGPGTDPAKTQCNE 443
Query: 121 VKGQC 125
KG+C
Sbjct: 444 -KGEC 447
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS++LQCNSEG+C+CKPGVTG KCD+C N++ F + GC+ C+C G+ C+ K
Sbjct: 386 GSVSLQCNSEGQCRCKPGVTGIKCDKCQANYFGFSQTGCRPCQCFGPGTDPAKTQCNE-K 444
Query: 232 GQCECKDNVEGAQC 245
G+C CK +V GA+C
Sbjct: 445 GECTCKRHVVGAKC 458
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 94/216 (43%), Gaps = 51/216 (23%)
Query: 24 GHCLDC-QGDRDGP--NCEKCRDNYYQKSG---DNFCTACNC------NPIG---SLNLQ 68
G CL C R+GP CE C YY + C AC C +P G +L
Sbjct: 825 GDCLKCIHNTRNGPISQCELCAIGYYGNATHYPKPQCKACECYVQGTVSPPGHDPTLPFP 884
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCES 127
C+ +GRC C P V+GDKCD C +++ GC+ C C+ GS NT C GQC
Sbjct: 885 CDDKGRCTCLPNVSGDKCDTCRPEYWNVASGKGCEPCNCDTTGSWNNT--CSVTTGQC-- 940
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH----------GGSLNLQ 177
H + V R+ +C D Y GSLN+
Sbjct: 941 ---------HCKPGVTGRR-----------CDQCSIDHYAFSELGCLACNCNLQGSLNVT 980
Query: 178 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
C+ +G CQC+PGV G KCD C N ++ AGC +C
Sbjct: 981 CDEQGVCQCRPGVLGIKCDSCQENFHNL-TAGCIAC 1015
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 119/277 (42%), Gaps = 68/277 (24%)
Query: 6 FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCN 60
F RC + G C DC G C+ C+D YY ++ C CNC
Sbjct: 757 FGTRCI-------QIGANVVCTDCPEGHVGNLCDMCQDGYYGDPMGKRGAPTTCQKCNC- 808
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGD--------------KCDRCDVNHY----DFGEAGCK 102
S N+ N+ G C +TGD +C+ C + +Y + + CK
Sbjct: 809 ---SGNIDPNAIGSCD---RLTGDCLKCIHNTRNGPISQCELCAIGYYGNATHYPKPQCK 862
Query: 103 SCECNPAGSVKNTPNCDSV-------KGQCESAQLSSRGRVHT----ELRVQSRKNFDPA 151
+CEC G+V + P D KG+C S + T V S K +P
Sbjct: 863 ACECYVQGTV-SPPGHDPTLPFPCDDKGRCTCLPNVSGDKCDTCRPEYWNVASGKGCEP- 920
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
C DT GS N C+ + G+C CKPGVTG +CD+C ++HY F E GC
Sbjct: 921 ---------CNCDT-----TGSWNNTCSVTTGQCHCKPGVTGRRCDQCSIDHYAFSELGC 966
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+C CN GS+ T CD +G C+C+ V G +C S
Sbjct: 967 LACNCNLQGSLNVT--CDE-QGVCQCRPGVLGIKCDS 1000
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 92/246 (37%), Gaps = 59/246 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG ++ C +E G CQ D +G +CE+C+ Y + N
Sbjct: 264 CKCNGHASEC---EETRLWDGQTRLQCKCQHDTEGVDCERCKPLYNDRPWARASSRNANE 320
Query: 54 CTACNCNPIG-------SLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEAGCKSC 104
C CNCN + +L Q GRCQ CK G C+RC N Y C +C
Sbjct: 321 CVRCNCNGLAESCVFDEALYRQTGHGGRCQNCKQNTDGPNCERCKENFYRKTSLEPCVAC 380
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
CNP GSV + C+S +GQC P I +C+ +
Sbjct: 381 GCNPVGSV--SLQCNS-EGQCRC---------------------KPGVTGI-KCDKCQAN 415
Query: 165 TYPLGHGG------------SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 209
+ G QCN +G C CK V G KC C ++ + G
Sbjct: 416 YFGFSQTGCRPCQCFGPGTDPAKTQCNEKGECTCKRHVVGAKCTLCRSGYFGLEASNPHG 475
Query: 210 CKSCEC 215
CK C C
Sbjct: 476 CKQCFC 481
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 12/114 (10%)
Query: 4 NGFSNRCFFDKELY-----NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTA 56
G + FF+ +Y N+ C C + G NCE+C+D Y +++G D +
Sbjct: 643 TGMLDGMFFESAVYDPTSPNQVNWVEQC-SCPKEYKGNNCEQCKDGYTRQAGSTDRYAQC 701
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG----CKSCEC 106
C G + G+C CK TG +CD+C +Y G CK C C
Sbjct: 702 VPCQCYGHSDTCDPVTGKCNCKHNTTGIRCDKCIDGYYGNPTQGTPDDCKKCPC 755
>gi|224172798|ref|XP_002190844.1| PREDICTED: laminin subunit gamma-1, partial [Taeniopygia guttata]
Length = 1306
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC C G+ DGP CE+CRD++Y+ + D C C+CN
Sbjct: 101 CDCNGRSQECYFDPELYRATGHGGHCTACAGNTDGPRCERCRDSFYRLASDQGCLPCSCN 160
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S G+C CKPGV GDKCDRC + EAGC+ C CN AGS T C+
Sbjct: 161 PVGSLSTQCDSYGQCSCKPGVMGDKCDRCQPGFHSLSEAGCRPCSCNAAGS---TGECNV 217
Query: 121 VKGQC 125
G+C
Sbjct: 218 ETGRC 222
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 112/244 (45%), Gaps = 47/244 (19%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C CQ G CE C D Y+ GD C C CN N+ N+ G C
Sbjct: 489 CTSCQAGTTGKRCELCDDAYF---GDPLGRNGAVRPCRLCQCNN----NIDPNAVGNCDR 541
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C G CDRC + A C++C CNP G+V + C+ V GQ
Sbjct: 542 QTGECLKCIYNTAGFYCDRCKDGFFGNPLASDPADKCRACHCNPYGTVNHQTICNQVTGQ 601
Query: 125 CE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE- 181
CE + ++ R E P + R C+R + + LG S + QC+
Sbjct: 602 CECLSHVTGRDCSACE----------PGFFNLQSGRGCERCNCHALG---STSGQCDIRT 648
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+PGVTG +CD C+ NH+ FG GCK C+C+P GS + C G CECK+
Sbjct: 649 GQCECQPGVTGQQCDSCESNHFGFGSEGCKPCDCDPEGS--RSLQCRE-NGHCECKEGFV 705
Query: 242 GAQC 245
G++C
Sbjct: 706 GSRC 709
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC+S G+C CKPGV GDKCDRC + EAGC+ C CN AGS T C+
Sbjct: 163 GSLSTQCDSYGQCSCKPGVMGDKCDRCQPGFHSLSEAGCRPCSCNAAGS---TGECNVET 219
Query: 232 GQCECKDNVEGAQC 245
G+C CKDNVEG C
Sbjct: 220 GRCACKDNVEGFHC 233
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 89/209 (42%), Gaps = 43/209 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + C AC+CNP G++N Q CN G+C+
Sbjct: 544 GECLKCIYNTAGFYCDRCKDGFFGNPLASDPADKCRACHCNPYGTVNHQTICNQVTGQCE 603
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C VTG C C+ ++ GC+ C C+ GS CD GQCE
Sbjct: 604 CLSHVTGRDCSACEPGFFNLQSGRGCERCNCHALGSTSG--QCDIRTGQCECQ------- 654
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSEGRCQ 185
G C+ + + G G S +LQC G C+
Sbjct: 655 ---------------PGVTGQQCDSCESNHFGFGSEGCKPCDCDPEGSRSLQCRENGHCE 699
Query: 186 CKPGVTGDKCDRCDVNH-YDFGEAGCKSC 213
CK G G +C++C+ N+ Y+ GC+ C
Sbjct: 700 CKEGFVGSRCNQCEENYFYNRSWPGCQEC 728
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 114/271 (42%), Gaps = 51/271 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC-TACNC 59
C CNG S C D E G C +C+ + G +CEKC D YY GD TA +C
Sbjct: 421 CACNGHSETC--DPET-------GMC-NCRDNTAGTHCEKCSDGYY---GDATAGTASDC 467
Query: 60 NP------------IGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGEAG----C 101
P + + C S C+ G TG +C+ CD ++ G G C
Sbjct: 468 QPCPCPGTSSCAIVPRTKEVVCTS-----CQAGTTGKRCELCDDAYFGDPLGRNGAVRPC 522
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RR 160
+ C+CN NCD G+C ++ G R + +P + D R
Sbjct: 523 RLCQCNNNIDPNAVGNCDRQTGECLKCIYNTAGFYCD--RCKDGFFGNPLASDPADKCRA 580
Query: 161 CKRDTYPLGHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECN 216
C + Y G++N Q CN G+C+C VTG C C+ ++ GC+ C C+
Sbjct: 581 CHCNPY-----GTVNHQTICNQVTGQCECLSHVTGRDCSACEPGFFNLQSGRGCERCNCH 635
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
GS CD GQCEC+ V G QC S
Sbjct: 636 ALGSTSG--QCDIRTGQCECQPGVTGQQCDS 664
>gi|417413889|gb|JAA53254.1| Putative netrin axonal chemotropic factor, partial [Desmodus
rotundus]
Length = 1563
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 88/125 (70%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG + C+FD ELY TGHGGHC +CQ + DGPNCE+CR+N+++ C+ C+C+
Sbjct: 296 CNCNGRAQECYFDPELYRSTGHGGHCTNCQDNTDGPNCERCRENFFRLGSTEACSPCHCS 355
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS T C+
Sbjct: 356 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCACDPSGS---TDECNI 412
Query: 121 VKGQC 125
G+C
Sbjct: 413 ETGRC 417
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 110/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ + C C CN N+ N+ G C
Sbjct: 746 CTNCPTGTTGKRCELCDDGYFGDPLGRHGPVRLCRLCQCND----NIDPNAVGNCNRLTG 801
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A C++C CNP G+ + C V GQCE
Sbjct: 802 ECLKCIHNTAGFYCDRCQDGFFGNPRAPNPADKCRACNCNPYGTTRQQGTCSPVTGQCEC 861
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 862 LP-----------HVTGRDCGECDPGFYHLHSGKGCERCDCHALG---STNGQCDIRTGQ 907
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ + C G+CEC++ G+
Sbjct: 908 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSL--SLQCKD-NGRCECREGFVGS 964
Query: 244 QC 245
+C
Sbjct: 965 RC 966
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 57/97 (58%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 335 RCRENFFRLGSTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 394
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS T C+ G+C CKDNVEG C
Sbjct: 395 GCRPCACDPSGS---TDECNIETGRCVCKDNVEGFNC 428
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 97/200 (48%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ---CNSEGRCQ 76
G CL C + G C++C+D ++ + + C ACNCNP G+ Q G+C+
Sbjct: 801 GECLKCIHNTAGFYCDRCQDGFFGNPRAPNPADKCRACNCNPYGTTRQQGTCSPVTGQCE 860
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y GC+ C+C+ GS CD GQCE Q G+
Sbjct: 861 CLPHVTGRDCGECDPGFYHLHSGKGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 917
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC GRC+C+ G G +
Sbjct: 918 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDNGRCECREGFVGSR 965
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 966 CDQCEENYFYNRSWPGCQEC 985
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 107/259 (41%), Gaps = 31/259 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C C+ + GP+CEKC D YY S + C C
Sbjct: 678 CTCNGHSETC--DPET-------GVC-HCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 727
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 728 PC-PGGSSCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGDPLGRHGPVRLCRLCQCND 786
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
NC+ + G+C ++ G R Q +P D +C+ + P
Sbjct: 787 NIDPNAVGNCNRLTGECLKCIHNTAGFYCD--RCQDGFFGNPRAPNPAD--KCRACNCNP 842
Query: 168 LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPN 226
G G+C+C P VTG C CD Y GC+ C+C+ GS
Sbjct: 843 YGTTRQQGTCSPVTGQCECLPHVTGRDCGECDPGFYHLHSGKGCERCDCHALGSTNG--Q 900
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 901 CDIRTGQCECQPGITGQHC 919
>gi|395530958|ref|XP_003767551.1| PREDICTED: laminin subunit gamma-1, partial [Sarcophilus harrisii]
Length = 1535
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 87/125 (69%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S C+FD ELY TGHGGHC +CQ + DG NCE+CR+N+Y+ + C C+C+
Sbjct: 285 CNCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGANCERCRENFYRLGNEEACLPCHCS 344
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC++ GRC CKPGV GDKCD+C + EAGC+ C CNPAGS T C+
Sbjct: 345 PVGSLSTQCDNYGRCSCKPGVMGDKCDQCQPGFHSLTEAGCRPCSCNPAGS---TDECNV 401
Query: 121 VKGQC 125
G+C
Sbjct: 402 ETGRC 406
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + Y LG+ GSL+ QC++ GRC CKPGV GDKCD+C + EA
Sbjct: 324 RCRENFYRLGNEEACLPCHCSPVGSLSTQCDNYGRCSCKPGVMGDKCDQCQPGFHSLTEA 383
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNPAGS T C+ G+C CKDNVEG C
Sbjct: 384 GCRPCSCNPAGS---TDECNVETGRCVCKDNVEGFSC 417
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 111/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G+N C C C S N+ N+ G C
Sbjct: 735 CTNCPTGTTGKRCELCDDGYFGDPLGENGPTRLCRLCQC----SDNIDPNAVGNCNRLTG 790
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+V C+ V GQCE
Sbjct: 791 ECLKCIYNTAGFYCDRCRDGFFGNPLAPNPADKCKACSCNPYGTVNQQTTCNQVTGQCEC 850
Query: 128 AQLSSRGRVHTELRVQSR--KNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R + + LG S N QC+ G+
Sbjct: 851 LP-----------HVTERDCSICDPGFYNLQSGQGCERCNCHALG---STNGQCDIRTGQ 896
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG +C++C+ NH+ FG GCK C+C+P GS+ D G+CECK+ G
Sbjct: 897 CECQPGITGQRCEQCEPNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECKEGFVGN 953
Query: 244 QC 245
+C
Sbjct: 954 RC 955
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 100/203 (49%), Gaps = 31/203 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++CRD ++ + + C AC+CNP G++N Q CN G+C+
Sbjct: 790 GECLKCIYNTAGFYCDRCRDGFFGNPLAPNPADKCKACSCNPYGTVNQQTTCNQVTGQCE 849
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VT C CD Y+ GC+ C C+ GS CD GQCE + R
Sbjct: 850 CLPHVTERDCSICDPGFYNLQSGQGCERCNCHALGSTNG--QCDIRTGQCECQPGITGQR 907
Query: 136 VHTELRVQSRKN---FDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVT 191
Q N F P G CK D +P GSL+LQC +GRC+CK G
Sbjct: 908 CE-----QCEPNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECKEGFV 951
Query: 192 GDKCDRCDVNH-YDFGEAGCKSC 213
G++CD+C+ N+ Y+ GC+ C
Sbjct: 952 GNRCDQCEENYFYNRSWPGCQEC 974
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 113/261 (43%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 667 CTCNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCVDGYYGDSTAGTSSDCQPC 716
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ GE G C+ C+C+
Sbjct: 717 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGENGPTRLCRLCQCSD 775
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ + G+C ++ G R N A N + C + Y
Sbjct: 776 NIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCRDGFFGN-PLAPNPADKCKACSCNPY-- 832
Query: 169 GHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G++N Q CN G+C+C P VT C CD Y+ GC+ C C+ GS
Sbjct: 833 ---GTVNQQTTCNQVTGQCECLPHVTERDCSICDPGFYNLQSGQGCERCNCHALGSTNG- 888
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G +C
Sbjct: 889 -QCDIRTGQCECQPGITGQRC 908
>gi|291222160|ref|XP_002731086.1| PREDICTED: laminin B2-like [Saccoglossus kowalevskii]
Length = 1629
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 87/125 (69%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG SNRC+F+++L+ RTGHGG+C++C+ + GPNCE+CRD+YY+ S +FC C+CN
Sbjct: 353 CDCNGLSNRCYFNEDLFERTGHGGYCVECRLNTAGPNCERCRDDYYRTSPTDFCQPCHCN 412
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS+ QC+ GRC CKPGVTG+KC C + YDF GC+ C C GS+ N P C
Sbjct: 413 ATGSVTTQCDETGRCICKPGVTGEKCVHCMPDFYDFSVTGCRPCACTIGGSLNNDPRCRP 472
Query: 121 VKGQC 125
G C
Sbjct: 473 DTGIC 477
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C DCQ G NC +CR Y+ C CNCN +GSLN +C S G C C+PGVT
Sbjct: 915 GQC-DCQPYVRGRNCSECRPGYWNIDSGTGCIECNCNYMGSLNGECEISTGNCICQPGVT 973
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G+KCDRC ++Y F + GC +C C+P GS+ + CD GQC
Sbjct: 974 GEKCDRCLPHYYGFSQDGCSACNCDPQGSL--SLQCDDF-GQC 1013
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 44/74 (59%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS+ QC+ GRC CKPGVTG+KC C + YDF GC+ C C GS+ N P C
Sbjct: 415 GSVTTQCDETGRCICKPGVTGEKCVHCMPDFYDFSVTGCRPCACTIGGSLNNDPRCRPDT 474
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG C
Sbjct: 475 GICTCKVNVEGLNC 488
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 105/236 (44%), Gaps = 34/236 (14%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGR----CQ 76
C +C G CE C D YY +F C C CN N N +G +
Sbjct: 807 CTNCDSGYTGTRCEMCADGYYGDPLGDFGSPQPCRECLCNGNIDSNAVANCDGLTGECLK 866
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C G C C +Y G+A CK C+C GS C V GQC+ Q
Sbjct: 867 CIYNTAGYYCQDCLPGYY--GDAISEPKGQCKPCDCYLPGS--RGAACHPVDGQCD-CQP 921
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPG 189
RGR +E R N D I C + GSLN +C S G C C+PG
Sbjct: 922 YVRGRNCSECR-PGYWNIDSGTGCI----ECN-----CNYMGSLNGECEISTGNCICQPG 971
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG+KCDRC ++Y F + GC +C C+P GS+ + CD GQC CKD V G +C
Sbjct: 972 VTGEKCDRCLPHYYGFSQDGCSACNCDPQGSL--SLQCDDF-GQCLCKDGVIGEKC 1024
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G+C+ CQ G C++C +YY S D C+ACNC+P GSL+LQC+ G+C CK GV G
Sbjct: 964 GNCI-CQPGVTGEKCDRCLPHYYGFSQDG-CSACNCDPQGSLSLQCDDFGQCLCKDGVIG 1021
Query: 84 DKCDRCDVNHYDFGEAGCKSC 104
+KCD C N Y+ GC +C
Sbjct: 1022 EKCDMCSENRYNLA-LGCIAC 1041
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 108/260 (41%), Gaps = 37/260 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG S+ C G CL C+ + G NCE+C+ YY ++ ++ CT C
Sbjct: 740 CECNGHSSACDV---------LTGACL-CEHNTQGDNCEQCKSGYYGNARQGTEDDCTKC 789
Query: 58 NCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY-----DFGEAG-CKSCECNPAG 110
C G + E C C G TG +C+ C +Y DFG C+ C CN
Sbjct: 790 PCPNNGECLQIPDGEVVCTNCDSGYTGTRCEMCADGYYGDPLGDFGSPQPCRECLCNGNI 849
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKR-DTYP 167
NCD + G+C ++ G + +P G +CK D Y
Sbjct: 850 DSNAVANCDGLTGECLKCIYNTAGYYCQDCLPGYYGDAISEPKG-------QCKPCDCYL 902
Query: 168 LGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
G G+ C+ +G+C C+P V G C C +++ GC C CN GS+
Sbjct: 903 PGSRGA---ACHPVDGQCDCQPYVRGRNCSECRPGYWNIDSGTGCIECNCNYMGSLNG-- 957
Query: 226 NCDSVKGQCECKDNVEGAQC 245
C+ G C C+ V G +C
Sbjct: 958 ECEISTGNCICQPGVTGEKC 977
>gi|426240008|ref|XP_004013907.1| PREDICTED: laminin subunit gamma-1 [Ovis aries]
Length = 1608
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 82/112 (73%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S CFFD ELY TGHGGHC +CQ + DG CE+CR+N+++ C+ C+C+
Sbjct: 341 CDCNGRSQECFFDPELYRSTGHGGHCTNCQDNTDGAKCERCRENFFRLGNREACSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC ++ EAGC+ C CNP+GS+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSI 452
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 113/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 791 CTNCPTGTTGKRCELCDDGYFGDPLGSNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 846
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C+CNP G+VK +C+ V GQCE
Sbjct: 847 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQCEC 906
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 907 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIHSGQ 952
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 953 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 1009
Query: 244 QC 245
+C
Sbjct: 1010 RC 1011
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGH-----------GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC ++ EA
Sbjct: 380 RCRENFFRLGNREACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEA 439
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP+GS+ C+ G+C CKDNVEG C
Sbjct: 440 GCRPCSCNPSGSID---ECNVETGRCVCKDNVEGFNC 473
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q CN G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 906 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIHSGQCE-CQPGITGQ 962
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 963 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1010
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1011 CDQCEENYFYNRSWPGCQEC 1030
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 114/260 (43%), Gaps = 33/260 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY +G +F C C
Sbjct: 723 CTCNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSFDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGDPLGSNGPVRLCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
NC+ + G+C ++ G R + +P D +CK D P
Sbjct: 832 NIDPNAVGNCNRLTGECLKCIYNTAGFYCD--RCKDGFFGNPLAPNPAD--KCKACDCNP 887
Query: 168 LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 225
G + CN G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 888 YGTVKQQS-SCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG-- 944
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 945 QCDIHSGQCECQPGITGQHC 964
>gi|344278230|ref|XP_003410899.1| PREDICTED: laminin subunit gamma-1 [Loxodonta africana]
Length = 1608
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 82/112 (73%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C FD ELY TGHGGHC +CQ + DG NCE+CR+N+++ + C+ C+C+
Sbjct: 341 CDCNGRSQECSFDSELYRSTGHGGHCTNCQDNTDGANCERCRENFFRLGSNEVCSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C CNP+GS+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCNPSGSI 452
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 113/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 791 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCDRLTG 846
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+V+ +C+ V GQCE
Sbjct: 847 ECLKCIYNTAGFYCDRCKDGFFGNPLAPSPADKCKACACNPYGTVRQQSSCNPVTGQCEC 906
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R +P + + CKR D + LG S N QC+ G+
Sbjct: 907 LP-----------HVTGRDCGACEPGFYNLQSGQGCKRCDCHALG---STNGQCDIHNGQ 952
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG +C+RC+VNH+ FG GCK C+C+P GS+ D G+CECK+ G
Sbjct: 953 CECQPGITGQRCERCEVNHFGFGREGCKPCDCHPEGSLSLQCKDD---GRCECKEGFVGN 1009
Query: 244 QC 245
+C
Sbjct: 1010 RC 1011
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 57/97 (58%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 380 RCRENFFRLGSNEVCSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 439
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP+GS+ C+ G+C CKDNVEG C
Sbjct: 440 GCRPCSCNPSGSID---ECNVETGRCVCKDNVEGFSC 473
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 96/209 (45%), Gaps = 43/209 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ S + C AC CNP G++ Q CN G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPSPADKCKACACNPYGTVRQQSSCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C C+ Y+ GCK C+C+ GS CD GQCE + R
Sbjct: 906 CLPHVTGRDCGACEPGFYNLQSGQGCKRCDCHALGSTNG--QCDIHNGQCECQPGITGQR 963
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSEGRCQ 185
RC+ + + G G SL+LQC +GRC+
Sbjct: 964 CE----------------------RCEVNHFGFGREGCKPCDCHPEGSLSLQCKDDGRCE 1001
Query: 186 CKPGVTGDKCDRCDVNH-YDFGEAGCKSC 213
CK G G++CD+C+ N+ Y+ GC+ C
Sbjct: 1002 CKEGFVGNRCDQCEENYFYNRSWPGCQEC 1030
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 111/276 (40%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C C+ + GP+CEKC D YY S + C C
Sbjct: 723 CTCNGHSETC--DPET-------GVC-RCRDNTAGPHCEKCGDGYYGDSTMGTSSDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NCD + G+C ++ G + RCK +
Sbjct: 832 NIDPNAVGNCDRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 870
Query: 167 PLGHG-------------GSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q CN G+C+C P VTG C C+ Y+ G
Sbjct: 871 PLAPSPADKCKACACNPYGTVRQQSSCNPVTGQCECLPHVTGRDCGACEPGFYNLQSGQG 930
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CK C+C+ GS CD GQCEC+ + G +C
Sbjct: 931 CKRCDCHALGSTNG--QCDIHNGQCECQPGITGQRC 964
>gi|296478938|tpg|DAA21053.1| TPA: laminin B2-like [Bos taurus]
Length = 1608
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 82/112 (73%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG CE+CR+N+++ C+ C+C+
Sbjct: 341 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAKCERCRENFFRLGNREACSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC ++ EAGC+ C CNP+GS+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSI 452
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGH-----------GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC ++ EA
Sbjct: 380 RCRENFFRLGNREACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEA 439
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP+GS+ C+ G+C CKDNVEG C
Sbjct: 440 GCRPCSCNPSGSID---ECNIETGRCVCKDNVEGFNC 473
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 112/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D ++ G N C C CN N+ N+ G C
Sbjct: 791 CTNCPTGTTGRRCELCDDGHFGDPLGSNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 846
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A C++C+CNP G+VK +C+ V GQCE
Sbjct: 847 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACDCNPYGTVKQQSSCNPVTGQCEC 906
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 907 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDVHSGQ 952
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+ C+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 953 CECQPGITGQHCEHCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 1009
Query: 244 QC 245
+C
Sbjct: 1010 RC 1011
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 27/201 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q CN G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACDCNPYGTVKQQSSCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRG 134
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE ++ +
Sbjct: 906 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDVHSGQCECQPGITGQH 963
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
H E+ + F P G CK D +P GSL+LQC +GRC+C+ G G+
Sbjct: 964 CEHCEV---NHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGN 1009
Query: 194 KCDRCDVNH-YDFGEAGCKSC 213
+CD+C+ N+ Y+ GC+ C
Sbjct: 1010 RCDQCEENYFYNRSWPGCQEC 1030
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 113/261 (43%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTAC 57
C CNG S C D E G C +C+ + GPNCEKC D YY +G + C C
Sbjct: 723 CTCNGHSETC--DPE-------SGVC-NCRDNTAGPNCEKCSDGYYGDSTAGTSLDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD H+ G G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPKTQEVVCTNCPTGTTGRRCELCDDGHFGDPLGSNGPVRLCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ + G+C ++ G + N A N R C + Y
Sbjct: 832 NIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGN-PLAPNPADKCRACDCNPY-- 888
Query: 169 GHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G++ Q CN G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 889 ---GTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG- 944
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 945 -QCDVHSGQCECQPGITGQHC 964
>gi|332205887|ref|NP_001193746.1| laminin subunit gamma-1 precursor [Bos taurus]
Length = 1608
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 82/112 (73%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG CE+CR+N+++ C+ C+C+
Sbjct: 341 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAKCERCRENFFRLGNREACSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC ++ EAGC+ C CNP+GS+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSI 452
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGH-----------GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC ++ EA
Sbjct: 380 RCRENFFRLGNREACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEA 439
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP+GS+ C+ G+C CKDNVEG C
Sbjct: 440 GCRPCSCNPSGSID---ECNIETGRCVCKDNVEGFNC 473
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 112/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D ++ G N C C CN N+ N+ G C
Sbjct: 791 CTNCPTGTTGRRCELCDDGHFGDPLGSNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 846
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C+CNP G+VK +C+ V GQCE
Sbjct: 847 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQCEC 906
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 907 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDVHSGQ 952
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+ C+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 953 CECQPGITGQHCEHCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 1009
Query: 244 QC 245
+C
Sbjct: 1010 RC 1011
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 27/201 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q CN G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRG 134
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE ++ +
Sbjct: 906 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDVHSGQCECQPGITGQH 963
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
H E+ + F P G CK D +P GSL+LQC +GRC+C+ G G+
Sbjct: 964 CEHCEV---NHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGN 1009
Query: 194 KCDRCDVNH-YDFGEAGCKSC 213
+CD+C+ N+ Y+ GC+ C
Sbjct: 1010 RCDQCEENYFYNRSWPGCQEC 1030
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 113/260 (43%), Gaps = 33/260 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTAC 57
C CNG S C D E G C +C+ + GPNCEKC D YY +G + C C
Sbjct: 723 CTCNGHSETC--DPE-------SGVC-NCRDNTAGPNCEKCSDGYYGDSTAGTSLDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD H+ G G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPKTQEVVCTNCPTGTTGRRCELCDDGHFGDPLGSNGPVRLCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
NC+ + G+C ++ G R + +P D +CK D P
Sbjct: 832 NIDPNAVGNCNRLTGECLKCIYNTAGFYCD--RCKDGFFGNPLAPNPAD--KCKACDCNP 887
Query: 168 LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 225
G + CN G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 888 YGTVKQQS-SCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG-- 944
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 945 QCDVHSGQCECQPGITGQHC 964
>gi|403266353|ref|XP_003925353.1| PREDICTED: laminin subunit gamma-1 [Saimiri boliviensis
boliviensis]
Length = 1608
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 84/112 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 341 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+SC C+P+GS+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCRPGFHSLTEAGCRSCSCDPSGSI 452
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 114/242 (47%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 791 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 846
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+VK +C+ V GQCE
Sbjct: 847 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTVKQQSSCNPVTGQCEC 906
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D +PLG S N QC+ G+
Sbjct: 907 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHPLG---STNGQCDIHTGQ 952
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G+
Sbjct: 953 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGS 1009
Query: 244 QC 245
+C
Sbjct: 1010 RC 1011
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 103/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCNP G++ Q CN G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTVKQQSSCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+P GS CD GQCE Q G+
Sbjct: 906 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHPLGSTNG--QCDIHTGQCE-CQPGITGQ 962
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G +
Sbjct: 963 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGSR 1010
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1011 CDQCEENYFYNRSWPGCQEC 1030
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 380 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCRPGFHSLTEA 439
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+SC C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 440 GCRSCSCDPSGSID---ECNIETGRCVCKDNVEGFNC 473
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 113/276 (40%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C+CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 723 CSCNGHSEAC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 832 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 870
Query: 167 PLGHG-------------GSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q CN G+C+C P VTG C CD Y+ G
Sbjct: 871 PLAPNPADKCKACNCNPYGTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQG 930
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+P GS CD GQCEC+ + G C
Sbjct: 931 CERCDCHPLGSTNG--QCDIHTGQCECQPGITGQHC 964
>gi|440908229|gb|ELR58273.1| Laminin subunit gamma-1, partial [Bos grunniens mutus]
Length = 1565
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 82/112 (73%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG CE+CR+N+++ C+ C+C+
Sbjct: 299 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAKCERCRENFFRLGNREACSPCHCS 358
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC ++ EAGC+ C CNP+GS+
Sbjct: 359 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSI 410
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGH-----------GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC ++ EA
Sbjct: 338 RCRENFFRLGNREACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEA 397
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP+GS+ C+ G+C CKDNVEG C
Sbjct: 398 GCRPCSCNPSGSID---ECNIETGRCVCKDNVEGFNC 431
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 111/242 (45%), Gaps = 44/242 (18%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 749 CTNCPTGTTGKRCELCDDGYFGDPLGSNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 804
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C+CNP G+VK +C+ V GQCE
Sbjct: 805 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQCEC 864
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 865 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIHSGQ 910
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+ C+VNH+ FG GCK C+C+P G + C G+CEC++ G
Sbjct: 911 CECQPGITGQHCEHCEVNHFGFGPEGCKPCDCHPEGI---SLQCKD-DGRCECREGFVGN 966
Query: 244 QC 245
+C
Sbjct: 967 RC 968
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 103/201 (51%), Gaps = 28/201 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q CN G+C+
Sbjct: 804 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQCE 863
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRG 134
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE ++ +
Sbjct: 864 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIHSGQCECQPGITGQH 921
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
H E+ + F P G CK D +P G ++LQC +GRC+C+ G G+
Sbjct: 922 CEHCEV---NHFGFGPEG--------CKPCDCHPEG----ISLQCKDDGRCECREGFVGN 966
Query: 194 KCDRCDVNH-YDFGEAGCKSC 213
+CD+C+ N+ Y+ GC+ C
Sbjct: 967 RCDQCEENYFYNRSWPGCQEC 987
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 113/260 (43%), Gaps = 33/260 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTAC 57
C CNG S C D E G C +C+ + GPNCEKC D YY +G + C C
Sbjct: 681 CTCNGHSETC--DPE-------SGVC-NCRDNTAGPNCEKCSDGYYGDSTAGTSLDCQPC 730
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 731 PC-PGGSSCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGDPLGSNGPVRLCRLCQCND 789
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
NC+ + G+C ++ G R + +P D +CK D P
Sbjct: 790 NIDPNAVGNCNRLTGECLKCIYNTAGFYCD--RCKDGFFGNPLAPNPAD--KCKACDCNP 845
Query: 168 LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 225
G + CN G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 846 YGTVKQQS-SCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG-- 902
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 903 QCDIHSGQCECQPGITGQHC 922
>gi|324499717|gb|ADY39887.1| Laminin-like protein lam-2 [Ascaris suum]
Length = 1663
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 92/135 (68%), Gaps = 1/135 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ SNRC++D EL+ RTG GGHC+DC G+ G +CE+C N +++ G+++C C CN
Sbjct: 365 CNCSRLSNRCYYDHELFERTGSGGHCVDCAGNTQGAHCEECAPNNWRRPGEHYCVPCRCN 424
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
+GSL++QC+ G+C CKPGV G CDRC Y+F + GCK C+C AGS N P C+S
Sbjct: 425 EVGSLSMQCDESGQCPCKPGVDGQFCDRCKNGFYEFSKTGCKDCQCEVAGSFNNEPRCNS 484
Query: 121 VKGQCESAQLSSRGR 135
G C + +L+ GR
Sbjct: 485 QSGDC-ACKLNVEGR 498
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 49/74 (66%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL++QC+ G+C CKPGV G CDRC Y+F + GCK C+C AGS N P C+S
Sbjct: 427 GSLSMQCDESGQCPCKPGVDGQFCDRCKNGFYEFSKTGCKDCQCEVAGSFNNEPRCNSQS 486
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 487 GDCACKLNVEGRQC 500
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 102/237 (43%), Gaps = 81/237 (34%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGS-------LNLQC-N 70
G C C + G NCEKCR Y+ + GD C AC C G+ L+C
Sbjct: 884 GECKKCIYNTMGFNCEKCRPGYWGDALLEPKGD--CKACRCFAPGTKRPSIDYTILECRQ 941
Query: 71 SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
S+G+C C+P V G +CD+C+ +++ GC+ C NCD++
Sbjct: 942 SDGQCDCQPHVIGPQCDQCEPGYFNLTSGTGCQEC------------NCDAL-------- 981
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKP 188
GS+N C+ + G+C+CKP
Sbjct: 982 ------------------------------------------GSVNSTCDVQTGQCRCKP 999
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GV+G +CD+C HY F GC C+C GS +P CD GQC C+D++EG +C
Sbjct: 1000 GVSGRRCDQCAPRHYGFSAEGCMPCDCEVIGS--ESPQCDVKTGQCLCRDHIEGRRC 1054
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 120/258 (46%), Gaps = 30/258 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
CNC+G S+ C G C+ CQ + G CE+C YY + D C+ C
Sbjct: 766 CNCHGHSDSC---------DAESGACI-CQHNTGGDTCERCARGYYGNALQETDQDCSPC 815
Query: 58 NCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKN 114
C G L + + C C G TG +CD C ++ +AG C+ CEC+ +
Sbjct: 816 PCPENGPCILHTDGDVICTDCPLGYTGRRCDVCADGYFGDPQAGKACEECECSGNIDPNS 875
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
NCDS G+C+ ++ G + R +P G D + C R P
Sbjct: 876 IGNCDSSSGECKKCIYNTMGFNCEKCRPGYWGDALLEPKG----DCKAC-RCFAPGTKRP 930
Query: 173 SLN---LQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNC 227
S++ L+C S+G+C C+P V G +CD+C+ +++ GC+ C C+ GSV +T C
Sbjct: 931 SIDYTILECRQSDGQCDCQPHVIGPQCDQCEPGYFNLTSGTGCQECNCDALGSVNST--C 988
Query: 228 DSVKGQCECKDNVEGAQC 245
D GQC CK V G +C
Sbjct: 989 DVQTGQCRCKPGVSGRRC 1006
>gi|444729326|gb|ELW69750.1| Laminin subunit gamma-1 [Tupaia chinensis]
Length = 1028
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 88/125 (70%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S CFFD ELY TGHGGHC +C+ + DG NCE+CR+N+++ + C+ C+C+
Sbjct: 324 CDCNGRSQECFFDPELYRSTGHGGHCTNCRDNTDGANCERCRENFFRLGNNEACSPCHCS 383
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C CNPAGS T C+
Sbjct: 384 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCNPAGS---TDECNI 440
Query: 121 VKGQC 125
G+C
Sbjct: 441 ETGRC 445
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 110/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ + C C C S N+ N+ G C
Sbjct: 726 CTNCPTGTSGKRCELCDDGYFGDPLGRNGPVRLCRLCQC----SDNIDPNAVGNCNRLTG 781
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C+CNP G+ NC+ V GQCE
Sbjct: 782 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTAGQQGNCNPVTGQCEC 841
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 842 LPY-----------VTGRDCGACDPGFYNLHSGKGCERCDCHALG---STNGQCDVRTGQ 887
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+V+H+ FG GCK C+C+P GS+ D G+CECK+ G
Sbjct: 888 CECQPGITGQHCERCEVHHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECKEGFVGN 944
Query: 244 QC 245
+C
Sbjct: 945 RC 946
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 95/194 (48%), Gaps = 34/194 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G+ Q N G+C+
Sbjct: 781 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTAGQQGNCNPVTGQCE 840
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE-----SAQL 130
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE + Q
Sbjct: 841 CLPYVTGRDCGACDPGFYNLHSGKGCERCDCHALGSTNG--QCDVRTGQCECQPGITGQH 898
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPG 189
R VH F P G CK D +P GSL+LQC +GRC+CK G
Sbjct: 899 CERCEVH-------HFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECKEG 940
Query: 190 VTGDKCDRCDVNHY 203
G++CD+C+ N++
Sbjct: 941 FVGNRCDQCEENYF 954
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 57/94 (60%), Gaps = 14/94 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 363 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 422
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
GC+ C CNPAGS T C+ G+C CKDNVEG
Sbjct: 423 GCRPCSCNPAGS---TDECNIETGRCVCKDNVEG 453
>gi|345325477|ref|XP_001516008.2| PREDICTED: laminin subunit gamma-1 [Ornithorhynchus anatinus]
Length = 1723
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S C+FD ELY GHGGHC +CQ + DG NCE+CR+N+Y+ + C C+C+
Sbjct: 456 CNCNGRSQECYFDPELYRSMGHGGHCTNCQDNTDGANCERCRENFYRLGSEEACLPCHCS 515
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC++ G C CKPGV GDKCDRC ++ EAGC+ C C+PAGS T C+
Sbjct: 516 PVGSLSTQCDNYGLCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCACDPAGS---TDECNI 572
Query: 121 VKGQC 125
G+C
Sbjct: 573 ETGRC 577
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 111/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ + C C C S N+ N+ G C
Sbjct: 906 CTNCPTGTTGKRCELCDDGYFGDPLGETGPVRLCRHCQC----SDNIDPNAVGNCNRLTG 961
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+V +C+ V GQCE
Sbjct: 962 ECLKCIYNTAGFYCDRCKDGFFGNPLAPDPADKCKACSCNPYGTVNQQTSCNQVTGQCEC 1021
Query: 128 AQLSSRGRVHTELRVQSR--KNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 1022 LP-----------HVTERDCSACDPGFFNLQSGQGCERCDCHALG---STNGQCDIRTGQ 1067
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C++C+V+H+ FG GCK C+C+P GS+ + C G+CECK+ G
Sbjct: 1068 CECQPGITGQHCEQCEVSHFGFGPEGCKPCDCDPEGSL--SLQCKD-NGRCECKEGFVGN 1124
Query: 244 QC 245
+C
Sbjct: 1125 RC 1126
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 57/97 (58%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + Y LG GSL+ QC++ G C CKPGV GDKCDRC ++ EA
Sbjct: 495 RCRENFYRLGSEEACLPCHCSPVGSLSTQCDNYGLCSCKPGVMGDKCDRCQPGYHSLTEA 554
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+PAGS T C+ G+C CKDNVEG C
Sbjct: 555 GCRPCACDPAGS---TDECNIETGRCVCKDNVEGFNC 588
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 100/200 (50%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + C AC+CNP G++N Q CN G+C+
Sbjct: 961 GECLKCIYNTAGFYCDRCKDGFFGNPLAPDPADKCKACSCNPYGTVNQQTSCNQVTGQCE 1020
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VT C CD ++ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 1021 CLPHVTERDCSACDPGFFNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 1077
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E S F P G CK D P GSL+LQC GRC+CK G G++
Sbjct: 1078 -HCEQCEVSHFGFGPEG--------CKPCDCDP---EGSLSLQCKDNGRCECKEGFVGNR 1125
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1126 CDQCEENYFYNRSWPGCQEC 1145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 111/276 (40%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTAC 57
C CNG S C G C +C+ + GP+CEKC D YY +G N C C
Sbjct: 838 CTCNGHSESC---------NPETGVC-NCRDNTAGPHCEKCSDGYYGDSTAGTNSDCQPC 887
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ GE G C+ C+C+
Sbjct: 888 PC-PEGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGETGPVRLCRHCQCSD 946
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 947 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 985
Query: 167 PLGHG-------------GSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++N Q CN G+C+C P VT C CD ++ G
Sbjct: 986 PLAPDPADKCKACSCNPYGTVNQQTSCNQVTGQCECLPHVTERDCSACDPGFFNLQSGQG 1045
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ GS CD GQCEC+ + G C
Sbjct: 1046 CERCDCHALGSTNG--QCDIRTGQCECQPGITGQHC 1079
>gi|296229572|ref|XP_002760329.1| PREDICTED: laminin subunit gamma-1 [Callithrix jacchus]
Length = 1608
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 89/125 (71%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 341 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+SC C+P+GS T C+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCRPGFHSLTEAGCRSCSCDPSGS---TDECNV 457
Query: 121 VKGQC 125
G+C
Sbjct: 458 ETGRC 462
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 113/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 791 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 846
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+VK +C+ V GQCE
Sbjct: 847 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTVKQQSSCNPVTGQCEC 906
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D +PLG S N QC+ G+
Sbjct: 907 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHPLG---STNGQCDIRTGQ 952
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 953 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 1009
Query: 244 QC 245
+C
Sbjct: 1010 RC 1011
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 104/200 (52%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCNP G++ Q CN G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTVKQQSSCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+P GS CD GQCE Q G+
Sbjct: 906 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHPLGSTNG--QCDIRTGQCE-CQPGITGQ 962
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 963 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1010
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1011 CDQCEENYFYNRSWPGCQEC 1030
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 380 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCRPGFHSLTEA 439
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+SC C+P+GS T C+ G+C CKDNVEG C
Sbjct: 440 GCRSCSCDPSGS---TDECNVETGRCVCKDNVEGFNC 473
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 112/276 (40%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 723 CTCNGHSEAC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 832 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 870
Query: 167 PLGHG-------------GSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q CN G+C+C P VTG C CD Y+ G
Sbjct: 871 PLAPNPADKCKACNCNPYGTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQG 930
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+P GS CD GQCEC+ + G C
Sbjct: 931 CERCDCHPLGSTNG--QCDIRTGQCECQPGITGQHC 964
>gi|363736407|ref|XP_001234659.2| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1 [Gallus
gallus]
Length = 1603
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 87/125 (69%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC+ C+ + DG +CE+CRD++Y+ + C C+CN
Sbjct: 336 CDCNGRSQECYFDPELYRSTGHGGHCMGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCN 395
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S G+C CKPGV G+KCDRC + EAGC+ C CNPAGS T C+
Sbjct: 396 PVGSLSTQCDSYGQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCNPAGS---TGECNM 452
Query: 121 VKGQC 125
G+C
Sbjct: 453 ETGRC 457
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 114/241 (47%), Gaps = 41/241 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C CQ G CE C D Y+ G+N C C CN N+ N+ G C
Sbjct: 786 CTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCND----NIDPNAVGNCNRQTG 841
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCE- 126
+C G CDRC + A C++C CNP G+V +C+ V GQCE
Sbjct: 842 ECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQCEC 901
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRC 184
+ ++ R E P + R C+R D + LG S N QC+ G+C
Sbjct: 902 LSHVTERDCSACE----------PGFFNLQSGRGCERCDCHALG---STNGQCDIWTGQC 948
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+C+PGVTG +CDRC+ NH+ FG GCK C+C+P GS C G+CECK+ G++
Sbjct: 949 ECQPGVTGQRCDRCEANHFGFGPEGCKPCDCDPEGS--RALQCRE-DGRCECKEGFVGSR 1005
Query: 245 C 245
C
Sbjct: 1006 C 1006
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 56/97 (57%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ Y LG GSL+ QC+S G+C CKPGV G+KCDRC + EA
Sbjct: 375 RCRDSFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQCSCKPGVMGEKCDRCQPGFHSLSEA 434
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNPAGS T C+ G+C CKDNVEG C
Sbjct: 435 GCRPCSCNPAGS---TGECNMETGRCTCKDNVEGFHC 468
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTG 83
CL +RD C C ++ C C+C+ +GS N QC+ G+C+C+PGVTG
Sbjct: 900 ECLSHVTERD---CSACEPGFFNLQSGRGCERCDCHALGSTNGQCDIWTGQCECQPGVTG 956
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGS 111
+CDRC+ NH+ FG GCK C+C+P GS
Sbjct: 957 QRCDRCEANHFGFGPEGCKPCDCDPEGS 984
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 96/205 (46%), Gaps = 35/205 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++N Q CN G+C+
Sbjct: 841 GECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQCE 900
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE-----SAQL 130
C VT C C+ ++ GC+ C+C+ GS CD GQCE + Q
Sbjct: 901 CLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNG--QCDIWTGQCECQPGVTGQR 958
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPG 189
R + F P G CK D P GS LQC +GRC+CK G
Sbjct: 959 CDRCEAN-------HFGFGPEG--------CKPCDCDP---EGSRALQCREDGRCECKEG 1000
Query: 190 VTGDKCDRCDVNH-YDFGEAGCKSC 213
G +CD+C+ N+ Y+ GC+ C
Sbjct: 1001 FVGSRCDQCEENYFYNRSWPGCQEC 1025
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 113/269 (42%), Gaps = 51/269 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC-TACNC 59
C CNG S C D E G C DC+ + G +CEKC D YY GD TA +C
Sbjct: 718 CTCNGHSETC--DPET-------GMC-DCRDNTAGSHCEKCSDGYY---GDATAGTALDC 764
Query: 60 NP------------IGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGEAG----C 101
P + + C S C+ G TG +C+ CD ++ GE G C
Sbjct: 765 QPCPCPGGSSCAVVPRTKEVVCTS-----CQTGTTGKRCELCDDAYFGDPLGENGAVRPC 819
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RR 160
+ C+CN NC+ G+C ++ G R + +P D R
Sbjct: 820 RLCQCNDNIDPNAVGNCNRQTGECLKCIYNTAGFYCD--RCKDGFFGNPLATNPADKCRA 877
Query: 161 CKRDTYPLGHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECN 216
C + Y G++N Q CN G+C+C VT C C+ ++ GC+ C+C+
Sbjct: 878 CHCNPY-----GTVNQQTSCNQVTGQCECLSHVTERDCSACEPGFFNLQSGRGCERCDCH 932
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS CD GQCEC+ V G +C
Sbjct: 933 ALGSTNG--QCDIWTGQCECQPGVTGQRC 959
>gi|426332996|ref|XP_004028074.1| PREDICTED: laminin subunit gamma-1 [Gorilla gorilla gorilla]
Length = 1609
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 84/112 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C++C+C+
Sbjct: 342 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSSCHCS 401
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 402 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 453
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 111/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C C S N+ N+ G C
Sbjct: 792 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQC----SDNIDPNAVGNCNRLTG 847
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+VK +C+ V GQCE
Sbjct: 848 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQSSCNPVTGQCEC 907
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R +P + + C+R D + LG S N QC+ G+
Sbjct: 908 LP-----------HVTGRDCGACEPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 953
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+ C+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 954 CECQPGITGQHCEHCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 1010
Query: 244 QC 245
+C
Sbjct: 1011 RC 1012
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 381 RCRENFFRLGNNEACSSCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 440
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 441 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 474
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 104/201 (51%), Gaps = 27/201 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q CN G+C+
Sbjct: 847 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQSSCNPVTGQCE 906
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRG 134
C P VTG C C+ Y+ GC+ C+C+ GS CD GQCE ++ +
Sbjct: 907 CLPHVTGRDCGACEPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCECQPGITGQH 964
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
H E+ + F P G CK D +P GSL+LQC +GRC+C+ G G+
Sbjct: 965 CEHCEV---NHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGN 1010
Query: 194 KCDRCDVNH-YDFGEAGCKSC 213
+CD+C+ N+ Y+ GC+ C
Sbjct: 1011 RCDQCEENYFYNRSWPGCQEC 1031
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 112/261 (42%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 724 CACNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 773
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+C+
Sbjct: 774 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSD 832
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ + G+C ++ G + N A N + C + Y
Sbjct: 833 NIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGN-PLAPNPADKCKACSCNPY-- 889
Query: 169 GHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G++ Q CN G+C+C P VTG C C+ Y+ GC+ C+C+ GS
Sbjct: 890 ---GTVKQQSSCNPVTGQCECLPHVTGRDCGACEPGFYNLQSGQGCERCDCHALGSTNG- 945
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 946 -QCDIRTGQCECQPGITGQHC 965
>gi|145309326|ref|NP_002284.3| laminin subunit gamma-1 precursor [Homo sapiens]
gi|224471885|sp|P11047.3|LAMC1_HUMAN RecName: Full=Laminin subunit gamma-1; AltName: Full=Laminin B2
chain; AltName: Full=Laminin-1 subunit gamma; AltName:
Full=Laminin-10 subunit gamma; AltName: Full=Laminin-11
subunit gamma; AltName: Full=Laminin-2 subunit gamma;
AltName: Full=Laminin-3 subunit gamma; AltName:
Full=Laminin-4 subunit gamma; AltName: Full=Laminin-6
subunit gamma; AltName: Full=Laminin-7 subunit gamma;
AltName: Full=Laminin-8 subunit gamma; AltName:
Full=Laminin-9 subunit gamma; AltName: Full=S-laminin
subunit gamma; Short=S-LAM gamma; Flags: Precursor
Length = 1609
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 84/112 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C++C+C+
Sbjct: 342 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSSCHCS 401
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 402 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 453
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 381 RCRENFFRLGNNEACSSCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 440
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 441 GCRPCSCDPSGSID---ECNIETGRCVCKDNVEGFNC 474
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 111/240 (46%), Gaps = 39/240 (16%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C C S N+ N+ G C
Sbjct: 792 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQC----SDNIDPNAVGNCNRLTG 847
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CN G++K +C+ V GQCE
Sbjct: 848 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCEC 907
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQ 185
+ Q DP + + C+R D + LG S N QC+ G+C+
Sbjct: 908 L---------PHVTGQDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQCE 955
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G +C
Sbjct: 956 CQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGNRC 1012
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCN G++ Q CN G+C+
Sbjct: 847 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCE 906
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 907 CLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 963
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 964 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1011
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1012 CDQCEENYFYNRSWPGCQEC 1031
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 112/261 (42%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 724 CACNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 773
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+C+
Sbjct: 774 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSD 832
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ + G+C ++ G + N A N + C + Y
Sbjct: 833 NIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGN-PLAPNPADKCKACNCNLY-- 889
Query: 169 GHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G++ Q CN G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 890 ---GTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNG- 945
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 946 -QCDIRTGQCECQPGITGQHC 965
>gi|186964|gb|AAA59492.1| laminin B2 chain [Homo sapiens]
Length = 1609
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 84/112 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C++C+C+
Sbjct: 342 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSSCHCS 401
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 402 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 453
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 112/240 (46%), Gaps = 39/240 (16%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C C S N+ N+ G C
Sbjct: 792 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQC----SDNIDPNAVGNCNRLTG 847
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G++K +C+ V GQCE
Sbjct: 848 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCEC 907
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQ 185
+ Q DP + + C+R D + LG S N QC+ G+C+
Sbjct: 908 L---------PHVTGQDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQCE 955
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G +C
Sbjct: 956 CQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGNRC 1012
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 103/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCNP G++ Q CN G+C+
Sbjct: 847 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCE 906
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 907 CLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 963
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 964 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1011
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1012 CDQCEENYFYNRSWPGCQEC 1031
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 381 RCRENFFRLGNNEACSSCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 440
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 441 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 474
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 111/276 (40%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 724 CACNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 773
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+C+
Sbjct: 774 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSD 832
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 833 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 871
Query: 167 PLGHG-------------GSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q CN G+C+C P VTG C CD Y+ G
Sbjct: 872 PLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQG 931
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ GS CD GQCEC+ + G C
Sbjct: 932 CERCDCHALGSTNG--QCDIRTGQCECQPGITGQHC 965
>gi|307107|gb|AAA59488.1| laminin B2 precursor [Homo sapiens]
gi|168277972|dbj|BAG10964.1| laminin subunit gamma-1 precursor [synthetic construct]
Length = 1609
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 84/112 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C++C+C+
Sbjct: 342 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSSCHCS 401
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 402 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 453
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 112/240 (46%), Gaps = 39/240 (16%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C C S N+ N+ G C
Sbjct: 792 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQC----SDNIDPNAVGNCNRLTG 847
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G++K +C+ V GQCE
Sbjct: 848 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCEC 907
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQ 185
+ Q DP + + C+R D + LG S N QC+ G+C+
Sbjct: 908 L---------PHVTGQDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQCE 955
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G +C
Sbjct: 956 CQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGNRC 1012
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 103/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCNP G++ Q CN G+C+
Sbjct: 847 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCE 906
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 907 CLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 963
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 964 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1011
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1012 CDQCEENYFYNRSWPGCQEC 1031
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 381 RCRENFFRLGNNEACSSCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 440
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 441 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 474
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 111/276 (40%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 724 CACNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 773
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+C+
Sbjct: 774 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSD 832
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 833 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 871
Query: 167 PLGHG-------------GSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q CN G+C+C P VTG C CD Y+ G
Sbjct: 872 PLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQG 931
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ GS CD GQCEC+ + G C
Sbjct: 932 CERCDCHALGSTNG--QCDIRTGQCECQPGITGQHC 965
>gi|402857881|ref|XP_003893466.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1 [Papio
anubis]
Length = 1770
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 83/112 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 545 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 604
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 605 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 656
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 112/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 953 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 1008
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+VK NC+ V GQCE
Sbjct: 1009 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQSNCNPVTGQCEC 1068
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 1069 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 1114
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 1115 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 1171
Query: 244 QC 245
+C
Sbjct: 1172 RC 1173
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q N G+C+
Sbjct: 1008 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQSNCNPVTGQCE 1067
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 1068 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 1124
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 1125 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1172
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1173 CDQCEENYFYNRSWPGCQEC 1192
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 584 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 643
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 644 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 677
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 110/276 (39%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 885 CTCNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 934
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 935 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 993
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 994 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 1032
Query: 167 PLGHG-------------GSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q N G+C+C P VTG C CD Y+ G
Sbjct: 1033 PLAPNPADKCKACSCNPYGTVKQQSNCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQG 1092
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ GS CD GQCEC+ + G C
Sbjct: 1093 CERCDCHALGSTNG--QCDIRTGQCECQPGITGQHC 1126
>gi|119611550|gb|EAW91144.1| laminin, gamma 1 (formerly LAMB2), isoform CRA_a [Homo sapiens]
gi|119611551|gb|EAW91145.1| laminin, gamma 1 (formerly LAMB2), isoform CRA_a [Homo sapiens]
Length = 1573
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 84/112 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C++C+C+
Sbjct: 306 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSSCHCS 365
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 366 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 417
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 345 RCRENFFRLGNNEACSSCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 404
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 405 GCRPCSCDPSGSID---ECNIETGRCVCKDNVEGFNC 438
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 111/240 (46%), Gaps = 39/240 (16%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C C S N+ N+ G C
Sbjct: 756 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQC----SDNIDPNAVGNCNRLTG 811
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CN G++K +C+ V GQCE
Sbjct: 812 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCEC 871
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQ 185
+ Q DP + + C+R D + LG S N QC+ G+C+
Sbjct: 872 L---------PHVTGQDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQCE 919
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G +C
Sbjct: 920 CQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGNRC 976
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCN G++ Q CN G+C+
Sbjct: 811 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCE 870
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 871 CLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 927
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 928 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 975
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 976 CDQCEENYFYNRSWPGCQEC 995
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 112/261 (42%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 688 CACNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 737
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+C+
Sbjct: 738 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSD 796
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ + G+C ++ G + N A N + C + Y
Sbjct: 797 NIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGN-PLAPNPADKCKACNCNLY-- 853
Query: 169 GHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G++ Q CN G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 854 ---GTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNG- 909
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 910 -QCDIRTGQCECQPGITGQHC 929
>gi|395729310|ref|XP_002809753.2| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1 [Pongo
abelii]
Length = 1804
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 83/112 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 537 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 596
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 597 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 648
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 112/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 987 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 1042
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+VK +C+ V GQCE
Sbjct: 1043 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTVKQQSSCNPVTGQCEC 1102
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 1103 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 1148
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 1149 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 1205
Query: 244 QC 245
+C
Sbjct: 1206 RC 1207
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCNP G++ Q CN G+C+
Sbjct: 1042 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTVKQQSSCNPVTGQCE 1101
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 1102 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 1158
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 1159 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1206
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD C+ N+ Y+ GC+ C
Sbjct: 1207 CDECEENYFYNRSWPGCQEC 1226
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 576 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 635
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 636 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 669
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 111/276 (40%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 919 CACNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 968
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 969 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 1027
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 1028 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 1066
Query: 167 PLGHG-------------GSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q CN G+C+C P VTG C CD Y+ G
Sbjct: 1067 PLAPNPADKCKACNCNPYGTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQG 1126
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ GS CD GQCEC+ + G C
Sbjct: 1127 CERCDCHALGSTNG--QCDIRTGQCECQPGITGQHC 1160
>gi|332230610|ref|XP_003264486.1| PREDICTED: laminin subunit gamma-1 [Nomascus leucogenys]
Length = 1608
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 83/112 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 341 CDCNGRSQECYFDSELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 452
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 113/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 791 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 846
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+VK +C+ V GQCE
Sbjct: 847 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTVKQQSSCNPVTGQCEC 906
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 907 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 952
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G+
Sbjct: 953 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGS 1009
Query: 244 QC 245
+C
Sbjct: 1010 RC 1011
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCNP G++ Q CN G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTVKQQSSCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 906 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 962
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G +
Sbjct: 963 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGSR 1010
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1011 CDQCEENYFYNRSWPGCQEC 1030
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 380 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 439
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 440 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 473
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 111/276 (40%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 723 CACNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 832 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 870
Query: 167 PLGHG-------------GSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q CN G+C+C P VTG C CD Y+ G
Sbjct: 871 PLAPNPADKCKACNCNPYGTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQG 930
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ GS CD GQCEC+ + G C
Sbjct: 931 CERCDCHALGSTNG--QCDIRTGQCECQPGITGQHC 964
>gi|397489314|ref|XP_003815675.1| PREDICTED: laminin subunit gamma-1 [Pan paniscus]
Length = 1609
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 83/112 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 342 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 401
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 402 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 453
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 112/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C C S N+ N+ G C
Sbjct: 792 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQC----SDNIDPNAVGNCNRLTG 847
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G++K +C+ V GQCE
Sbjct: 848 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCEC 907
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 908 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 953
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 954 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 1010
Query: 244 QC 245
+C
Sbjct: 1011 RC 1012
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 103/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCNP G++ Q CN G+C+
Sbjct: 847 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCE 906
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 907 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 963
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 964 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1011
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1012 CDQCEENYFYNRSWPGCQEC 1031
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 381 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 440
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 441 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 474
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 111/276 (40%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 724 CACNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 773
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+C+
Sbjct: 774 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSD 832
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 833 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 871
Query: 167 PLGHG-------------GSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q CN G+C+C P VTG C CD Y+ G
Sbjct: 872 PLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQG 931
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ GS CD GQCEC+ + G C
Sbjct: 932 CERCDCHALGSTNG--QCDIRTGQCECQPGITGQHC 965
>gi|114568344|ref|XP_001162648.1| PREDICTED: laminin subunit gamma-1 isoform 3 [Pan troglodytes]
Length = 1609
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 83/112 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 342 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 401
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 402 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 453
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 111/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C C S N+ N+ G C
Sbjct: 792 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQC----SDNIDPNAVGNCNRLTG 847
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G++K +C+ V GQCE
Sbjct: 848 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCEC 907
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 908 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 953
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G CEC++ G
Sbjct: 954 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GLCECREGFVGN 1010
Query: 244 QC 245
+C
Sbjct: 1011 RC 1012
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 381 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 440
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 441 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 474
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCNP G++ Q CN G+C+
Sbjct: 847 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCE 906
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 907 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 963
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +G C+C+ G G++
Sbjct: 964 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGLCECREGFVGNR 1011
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1012 CDQCEENYFYNRSWPGCQEC 1031
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 111/276 (40%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 724 CACNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 773
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+C+
Sbjct: 774 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSD 832
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 833 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 871
Query: 167 PLGHG-------------GSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q CN G+C+C P VTG C CD Y+ G
Sbjct: 872 PLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQG 931
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ GS CD GQCEC+ + G C
Sbjct: 932 CERCDCHALGSTNG--QCDIRTGQCECQPGITGQHC 965
>gi|387541724|gb|AFJ71489.1| laminin subunit gamma-1 precursor [Macaca mulatta]
Length = 1608
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 83/112 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 341 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 452
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 112/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 791 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 846
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+VK NC+ V GQCE
Sbjct: 847 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQSNCNPVTGQCEC 906
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 907 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 952
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 953 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 1009
Query: 244 QC 245
+C
Sbjct: 1010 RC 1011
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q N G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQSNCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 906 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 962
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 963 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1010
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1011 CDQCEENYFYNRSWPGCQEC 1030
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 380 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 439
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 440 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 473
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 110/276 (39%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 723 CTCNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 832 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 870
Query: 167 PLGHG-------------GSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q N G+C+C P VTG C CD Y+ G
Sbjct: 871 PLAPNPADKCKACSCNPYGTVKQQSNCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQG 930
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ GS CD GQCEC+ + G C
Sbjct: 931 CERCDCHALGSTNG--QCDIRTGQCECQPGITGQHC 964
>gi|395824899|ref|XP_003785688.1| PREDICTED: laminin subunit gamma-1 [Otolemur garnettii]
Length = 1608
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 83/112 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG NC++CR+N+++ + C+ C+C+
Sbjct: 341 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGANCDRCRENFFRLGNNEACSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C CNP+GS+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCNPSGSI 452
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 112/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 791 CTNCPTGTTGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND----NIDPNAVGNCNRLTG 846
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC Y A C++C CNP G+VK C+ V GQCE
Sbjct: 847 ECLKCIYNTAGFYCDRCKDGFYGNPLAPNPADKCRACSCNPYGTVKQQSRCNPVTGQCEC 906
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R + DP + + C+R D + LG S + QC+ G+
Sbjct: 907 LP-----------HVTGRDCGSCDPGFYNLQSGQGCERCDCHALG---STDGQCDIRTGQ 952
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 953 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKGD---GRCECREGFVGH 1009
Query: 244 QC 245
+C
Sbjct: 1010 RC 1011
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 380 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 439
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP+GS+ C+ G+C CKDNVEG C
Sbjct: 440 GCRPCSCNPSGSID---ECNVETGRCVCKDNVEGFNC 473
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D +Y + + C AC+CNP G++ Q CN G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFYGNPLAPNPADKCRACSCNPYGTVKQQSRCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 906 CLPHVTGRDCGSCDPGFYNLQSGQGCERCDCHALGSTDG--QCDIRTGQCE-CQPGITGQ 962
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G +
Sbjct: 963 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKGDGRCECREGFVGHR 1010
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1011 CDQCEENYFYNRSWPGCQEC 1030
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 95/258 (36%), Gaps = 74/258 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG---DNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 723 CVCNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCNDGYYGDSTVGTTSDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
C P GS + E C C G TG +C+ CD + FG+
Sbjct: 773 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGY--FGDP--------------- 814
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
L S G V Q N DP +G+ L
Sbjct: 815 ---------------LGSNGPVRLCRPCQCNDNIDPNA---------------VGNCNRL 844
Query: 175 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDS 229
+C +C G CDRC Y A C++C CNP G+VK C+
Sbjct: 845 TGEC-----LKCIYNTAGFYCDRCKDGFYGNPLAPNPADKCRACSCNPYGTVKQQSRCNP 899
Query: 230 VKGQCECKDNVEGAQCRS 247
V GQCEC +V G C S
Sbjct: 900 VTGQCECLPHVTGRDCGS 917
>gi|297281296|ref|XP_002808304.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1-like
[Macaca mulatta]
Length = 1608
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 83/112 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 341 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 452
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 111/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 791 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 846
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+VK NC+ V GQCE
Sbjct: 847 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQSNCNPVTGQCEC 906
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 907 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 952
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G CEC++ G
Sbjct: 953 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GHCECREGFVGN 1009
Query: 244 QC 245
+C
Sbjct: 1010 RC 1011
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 380 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 439
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 440 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 473
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q N G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQSNCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 906 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 962
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +G C+C+ G G++
Sbjct: 963 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGHCECREGFVGNR 1010
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1011 CDQCEENYFYNRSWPGCQEC 1030
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 111/261 (42%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 723 CTCNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ + G+C ++ G + N A N + C + Y
Sbjct: 832 NIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGN-PLAPNPADKCKACSCNPY-- 888
Query: 169 GHGGSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G++ Q N G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 889 ---GTVKQQSNCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG- 944
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 945 -QCDIRTGQCECQPGITGQHC 964
>gi|355746107|gb|EHH50732.1| hypothetical protein EGM_01602, partial [Macaca fascicularis]
Length = 1492
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 83/112 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 225 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 284
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 285 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 336
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 112/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 675 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 730
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+VK NC+ V GQCE
Sbjct: 731 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQSNCNPVTGQCEC 790
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R +P + + C+R D + LG S N QC+ G+
Sbjct: 791 LP-----------HVTGRDCGACNPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 836
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 837 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 893
Query: 244 QC 245
+C
Sbjct: 894 RC 895
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 264 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 323
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 324 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 357
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q N G+C+
Sbjct: 730 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQSNCNPVTGQCE 789
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C C+ Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 790 CLPHVTGRDCGACNPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 846
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 847 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 894
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 895 CDQCEENYFYNRSWPGCQEC 914
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 111/261 (42%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 607 CTCNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 656
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 657 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 715
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ + G+C ++ G + N A N + C + Y
Sbjct: 716 NIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGN-PLAPNPADKCKACSCNPY-- 772
Query: 169 GHGGSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G++ Q N G+C+C P VTG C C+ Y+ GC+ C+C+ GS
Sbjct: 773 ---GTVKQQSNCNPVTGQCECLPHVTGRDCGACNPGFYNLQSGQGCERCDCHALGSTNG- 828
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 829 -QCDIRTGQCECQPGITGQHC 848
>gi|355558957|gb|EHH15737.1| hypothetical protein EGK_01867, partial [Macaca mulatta]
Length = 1579
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 83/112 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 312 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 371
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 372 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 423
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 112/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 762 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 817
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+VK NC+ V GQCE
Sbjct: 818 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQSNCNPVTGQCEC 877
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 878 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 923
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 924 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 980
Query: 244 QC 245
+C
Sbjct: 981 RC 982
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q N G+C+
Sbjct: 817 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQSNCNPVTGQCE 876
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 877 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 933
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 934 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 981
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 982 CDQCEENYFYNRSWPGCQEC 1001
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 351 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 410
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 411 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 444
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 111/261 (42%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 694 CTCNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 743
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 744 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 802
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ + G+C ++ G + N A N + C + Y
Sbjct: 803 NIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGN-PLAPNPADKCKACSCNPY-- 859
Query: 169 GHGGSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G++ Q N G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 860 ---GTVKQQSNCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG- 915
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 916 -QCDIRTGQCECQPGITGQHC 935
>gi|339237515|ref|XP_003380312.1| putative laminin [Trichinella spiralis]
gi|316976875|gb|EFV60072.1| putative laminin [Trichinella spiralis]
Length = 1253
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 85/125 (68%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG SNRC+FD+ELY TG+GGHC++C G+ G +CE C +NY++ G C CNCN
Sbjct: 368 CDCNGLSNRCYFDEELYRMTGNGGHCINCAGNTRGAHCEACLENYWRAPGQQTCLPCNCN 427
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGS+N+QC+ G+C CKPGV G CDRC Y+F GC+ C C +GS+ N P+C S
Sbjct: 428 EIGSVNMQCDDSGQCICKPGVGGQHCDRCLPGFYEFSALGCRDCGCLESGSLDNQPSCRS 487
Query: 121 VKGQC 125
G C
Sbjct: 488 DTGDC 492
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 48/74 (64%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS+N+QC+ G+C CKPGV G CDRC Y+F GC+ C C +GS+ N P+C S
Sbjct: 430 GSVNMQCDDSGQCICKPGVGGQHCDRCLPGFYEFSALGCRDCGCLESGSLDNQPSCRSDT 489
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 490 GDCTCKRNVEGRQC 503
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 106/247 (42%), Gaps = 52/247 (21%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCNSEGRC--------Q 76
CLDC G CE C D Y+ + S CT C C S N+ NS G C +
Sbjct: 848 CLDCPNGYAGRRCEICSDGYFGEPSNGRNCTFCKC----SGNIDPNSVGNCDRTTGECKK 903
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C G +C++C Y G+A CK C+C G+ K + D ++ Q Q
Sbjct: 904 CIYNTHGFECEKCLPGFY--GDALLEPKGDCKPCDCYSFGTYKPRTDYDFLECQQNDGQC 961
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCN 179
V G R +C+ Y + G GSLN C+
Sbjct: 962 QCLNHV--------------TGRRC---DQCENGYYNISSGEGCQPCNCDPLGSLNTSCD 1004
Query: 180 -SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G+C CKPGV G +CD+C + H+ FG GC++C C GSV C GQC+C
Sbjct: 1005 INTGQCVCKPGVIGRRCDQCAMRHFGFGPKGCEACNCLVMGSVN--LQCSITTGQCQCHP 1062
Query: 239 NVEGAQC 245
N+EG QC
Sbjct: 1063 NIEGRQC 1069
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 98/205 (47%), Gaps = 32/205 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLN-------LQC-N 70
G C C + G CEKC +Y + GD C C+C G+ L+C
Sbjct: 899 GECKKCIYNTHGFECEKCLPGFYGDALLEPKGD--CKPCDCYSFGTYKPRTDYDFLECQQ 956
Query: 71 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
++G+CQC VTG +CD+C+ +Y+ GC+ C C+P GS+ + CD GQC +
Sbjct: 957 NDGQCQCLNHVTGRRCDQCENGYYNISSGEGCQPCNCDPLGSLNTS--CDINTGQC-VCK 1013
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKP 188
GR + ++ F P G + GS+NLQC+ + G+CQC P
Sbjct: 1014 PGVIGRRCDQCAMR-HFGFGPKGCEACNCLVM----------GSVNLQCSITTGQCQCHP 1062
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSC 213
+ G +CDRC N Y+ EAGC C
Sbjct: 1063 NIEGRQCDRCKENMYNL-EAGCLEC 1086
>gi|19571761|emb|CAD27803.1| lamC1 [Tetraodon nigroviridis]
Length = 1597
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S+ CFFD ELY TGHGGHC +C + DGPNCE+CR+N+++ C AC C+
Sbjct: 330 CSCNGKSSECFFDGELYRATGHGGHCRNCADNTDGPNCERCRENHHRDLNGERCLACGCS 389
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
+GS +LQC+S G C CKPGVTGDKCDRC + EAGC+ C C+P+GS T CD
Sbjct: 390 AVGSESLQCDSRGVCTCKPGVTGDKCDRCQPGFHSLTEAGCRPCACSPSGS---TQECDV 446
Query: 121 VKGQC 125
GQC
Sbjct: 447 NTGQC 451
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQC+S G C CKPGVTGDKCDRC + EAGC+ C C+P+GS T CD
Sbjct: 392 GSESLQCDSRGVCTCKPGVTGDKCDRCQPGFHSLTEAGCRPCACSPSGS---TQECDVNT 448
Query: 232 GQCECKDNVEGAQC 245
GQC CKDNVEG C
Sbjct: 449 GQCRCKDNVEGFSC 462
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 92/209 (44%), Gaps = 43/209 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C + +G C++C++ +Y + + C C+C+P+G++ Q + G+C
Sbjct: 835 GKCLKCIYNTEGSFCDRCKNGFYGNPLASNPADKCKPCSCSPLGTVGGQSSCSQVTGQCP 894
Query: 77 CKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V G C C ++ GC C+C+P GS CD + GQCE Q G
Sbjct: 895 CHPNVAGRDCGACQPGFFNLQSGTGCARCDCDPVGSTNG--QCDIITGQCE-CQPGVAG- 950
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSEGRCQ 185
LR Q RC+ D + G S QC +GRCQ
Sbjct: 951 ----LRCQ----------------RCELDFFGFSSSGCKPCDCDPEGSAAAQCQEDGRCQ 990
Query: 186 CKPGVTGDKCDRCDVN-HYDFGEAGCKSC 213
C+PG G +CD C+ N Y+ GC+ C
Sbjct: 991 CRPGFVGTRCDMCEENFFYNRSVPGCQQC 1019
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D ++ Q C AC C S N+ N+ G C
Sbjct: 780 CTNCPAGTTGKRCELCDDGFFGDPLGQSGPIRTCRACKC----SENIDPNAVGNCDRETG 835
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC Y A CK C C+P G+V +C V GQC
Sbjct: 836 KCLKCIYNTEGSFCDRCKNGFYGNPLASNPADKCKPCSCSPLGTVGGQSSCSQVTGQCP- 894
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRCQ 185
H + + P + C R D P+G S N QC+ G+C+
Sbjct: 895 --------CHPNVAGRDCGACQPGFFNLQSGTGCARCDCDPVG---STNGQCDIITGQCE 943
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PGV G +C RC+++ + F +GCK C+C+P GS D G+C+C+ G +C
Sbjct: 944 CQPGVAGLRCQRCELDFFGFSSSGCKPCDCDPEGSAAAQCQED---GRCQCRPGFVGTRC 1000
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S+ C D G C DCQ + G +CE+CRD +Y + TA +C+
Sbjct: 712 CSCNGHSDSCNPDT---------GAC-DCQDNTAGLSCERCRDGFYGDASGG--TAADCH 759
Query: 61 P-------IGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECN 107
P ++ L+ C G TG +C+ CD + G++G C++C+C+
Sbjct: 760 PCPCPAGATCAVVLRSKEVVCTNCPAGTTGKRCELCDDGFFGDPLGQSGPIRTCRACKCS 819
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTY 166
NCD G+C ++ G R ++ +P + D +CK
Sbjct: 820 ENIDPNAVGNCDRETGKCLKCIYNTEGSFCD--RCKNGFYGNPLASNPAD--KCKPCSCS 875
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
PLG G + G+C C P V G C C ++ GC C+C+P GS
Sbjct: 876 PLGTVGGQSSCSQVTGQCPCHPNVAGRDCGACQPGFFNLQSGTGCARCDCDPVGSTNG-- 933
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
CD + GQCEC+ V G +C+
Sbjct: 934 QCDIITGQCECQPGVAGLRCQ 954
>gi|14165136|gb|AAK55397.1|AF373841_1 laminin gamma 1 [Gallus gallus]
Length = 1007
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 87/125 (69%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC+ C+ + DG +CE+CRD++Y+ + C C+CN
Sbjct: 97 CDCNGRSQECYFDPELYRSTGHGGHCMGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCN 156
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S G+C CKPGV G+KCDRC + EAGC+ C CNPAGS T C+
Sbjct: 157 PVGSLSTQCDSYGQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCNPAGS---TGECNM 213
Query: 121 VKGQC 125
G+C
Sbjct: 214 ETGRC 218
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C CQ G CE C D Y+ + C C CN N+ N+ G C
Sbjct: 547 CTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCND----NIDPNAVGNCNRQTG 602
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCE- 126
+C G CDRC + A C +C CNP G+V +C+ V GQCE
Sbjct: 603 ECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCWACHCNPYGTVNQQTSCNQVTGQCEC 662
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRC 184
+ ++ R E P + R C+R D + LG S N QC+ G+C
Sbjct: 663 LSHVTERDCSACE----------PGFFNLQSGRGCERCDCHALG---STNGQCDIWTGQC 709
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+C+PGVTG +CDRC+ NH+ FG GCK C+C+P GS D G+CECK+ G++
Sbjct: 710 ECQPGVTGQRCDRCEANHFGFGPEGCKPCDCDPEGSRALQCRED---GRCECKEGFVGSR 766
Query: 245 C 245
C
Sbjct: 767 C 767
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC+S G+C CKPGV G+KCDRC + EAGC+ C CNPAGS T C+
Sbjct: 159 GSLSTQCDSYGQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCNPAGS---TGECNMET 215
Query: 232 GQCECKDNVEGAQC 245
G+C CKDNVEG C
Sbjct: 216 GRCTCKDNVEGFHC 229
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTG 83
CL +RD C C ++ C C+C+ +GS N QC+ G+C+C+PGVTG
Sbjct: 661 ECLSHVTERD---CSACEPGFFNLQSGRGCERCDCHALGSTNGQCDIWTGQCECQPGVTG 717
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGS 111
+CDRC+ NH+ FG GCK C+C+P GS
Sbjct: 718 QRCDRCEANHFGFGPEGCKPCDCDPEGS 745
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++N Q CN G+C+
Sbjct: 602 GECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCWACHCNPYGTVNQQTSCNQVTGQCE 661
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C VT C C+ ++ GC+ C+C+ GS CD GQCE + R
Sbjct: 662 CLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNG--QCDIWTGQCECQPGVTGQR 719
Query: 136 VHTELRVQSRK-NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R ++ F P G + D C + GS LQC +GRC+CK G G +
Sbjct: 720 CD---RCEANHFGFGPEGCKPCD---CDPE-------GSRALQCREDGRCECKEGFVGSR 766
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 767 CDQCEENYFYNRSWPGCQEC 786
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 115/264 (43%), Gaps = 41/264 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTAC 57
C CNG S C D E G C DC+ + G +CEKC D YY +G C C
Sbjct: 479 CTCNGHSETC--DPET-------GVC-DCRDNTAGSHCEKCSDGYYGDATAGTALDCQPC 528
Query: 58 NCNPIGS--LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C+ G TG +C+ CD ++ GE G C+ C+CN
Sbjct: 529 PC-PGGSSCAVVPRTKEVVCTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCND 587
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN---FDPAGNRIWDLRRCKRDT 165
NC+ G+C ++ G + N +PA ++ W C +
Sbjct: 588 NIDPNAVGNCNRQTGECLKCIYNTAGFYCDRCKDGFFGNPLATNPA-DKCW---ACHCNP 643
Query: 166 YPLGHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
Y G++N Q CN G+C+C VT C C+ ++ GC+ C+C+ GS
Sbjct: 644 Y-----GTVNQQTSCNQVTGQCECLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGST 698
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ V G +C
Sbjct: 699 NG--QCDIWTGQCECQPGVTGQRC 720
>gi|348578398|ref|XP_003474970.1| PREDICTED: laminin subunit gamma-1-like [Cavia porcellus]
Length = 1701
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 87/125 (69%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG NCE+CR+N+++ C+ C+C+
Sbjct: 434 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGANCERCRENFFRLGNKEACSPCHCS 493
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS T C+
Sbjct: 494 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGS---TDECNV 550
Query: 121 VKGQC 125
G+C
Sbjct: 551 ETGRC 555
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 113/241 (46%), Gaps = 41/241 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G+N C C CN N+ N+ G C
Sbjct: 884 CTNCPVGTTGKRCELCDDGYFGDPQGNNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 939
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCE- 126
+C G CDRC + A CK C CNP G+VK +C+ V GQCE
Sbjct: 940 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKDCSCNPYGTVKQQRDCNPVTGQCEC 999
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRC 184
+S R DP + R C+R D + LG S N QC+ G+C
Sbjct: 1000 LPHVSGRDCAVC----------DPGFYNLQSGRGCERCDCHALG---STNGQCDIRTGQC 1046
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G +
Sbjct: 1047 ECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGNR 1103
Query: 245 C 245
C
Sbjct: 1104 C 1104
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 473 RCRENFFRLGNKEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 532
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS T C+ G+C CKDNVEG C
Sbjct: 533 GCRPCSCDPSGS---TDECNVETGRCVCKDNVEGFNC 566
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C C+CNP G++ Q CN G+C+
Sbjct: 939 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKDCSCNPYGTVKQQRDCNPVTGQCE 998
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V+G C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 999 CLPHVSGRDCAVCDPGFYNLQSGRGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 1055
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 1056 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1103
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1104 CDQCEENYFYNRSWPGCQEC 1123
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 110/276 (39%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C DC+ + GP+CE+C D YY S + C C
Sbjct: 816 CTCNGHSETC--DPET-------GVC-DCRDNTAGPHCERCSDGYYGDSTVGASSDCQPC 865
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ + C+ C+CN
Sbjct: 866 PC-PGGSSCAVVPKTKEVVCTNCPVGTTGKRCELCDDGYFGDPQGNNGPVRLCRLCQCND 924
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 925 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 963
Query: 167 PLGHG-------------GSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q CN G+C+C P V+G C CD Y+ G
Sbjct: 964 PLAPNPADKCKDCSCNPYGTVKQQRDCNPVTGQCECLPHVSGRDCAVCDPGFYNLQSGRG 1023
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ GS CD GQCEC+ + G C
Sbjct: 1024 CERCDCHALGSTNG--QCDIRTGQCECQPGITGQHC 1057
>gi|126307081|ref|XP_001375119.1| PREDICTED: usherin [Monodelphis domestica]
Length = 5205
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 96/266 (36%), Positives = 131/266 (49%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-----S 49
C CN S C +DK + Y R G GG C +CQ + G NCE C+D +++ S
Sbjct: 575 CQCNNHSRSCHYDKTMDPFPAEYYRGG-GGVCDNCQHNTTGRNCELCKDYLFRQVGADPS 633
Query: 50 GDNFCTACNCNPIGSLN--LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
+ C C+C +G+ N L C+ G+C CK V+G +C++C Y+ E GC
Sbjct: 634 ARDICKPCDCYEVGTKNGSLLCDQIGGQCNCKRHVSGRQCNQCQDGFYNLQELAPDGCSP 693
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C CN +G+V C GQC+ +G V L+ R NF G +I LR +
Sbjct: 694 CNCNTSGTVDGDITCHQNSGQCKC-----KGNV-IGLKC-DRCNF---GFKI--LRSFNK 741
Query: 164 DTYPLGHG---GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
D H GS+N CN G+C+CK G +CD C N Y GCK C+CN G
Sbjct: 742 DGCEPCHCNLYGSVNKFCNPLSGQCKCKKDAKGLQCDACVENFYGLDIDGCKLCDCNTEG 801
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
++ T CD+ GQC CK NV G +C
Sbjct: 802 TLSGTV-CDAKTGQCTCKPNVGGRRC 826
Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/234 (33%), Positives = 121/234 (51%), Gaps = 26/234 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C C+ + G C++C D YYQ +N FC CNCN G++N L C+ S G+C CK
Sbjct: 813 GQC-TCKPNVGGRRCDECLDGYYQLRQNNSFFCLPCNCNKAGTVNDSLLCDKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GV G +C+ C+ + Y+ + GC+ CEC+ G++ + CD + GQC + +GR
Sbjct: 872 AGVRGLQCNHCEPHRYNLTISNLQGCQMCECDSLGTLADAV-CDQISGQCPCLP-NHQGR 929
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK-PGVTGD 193
+ + + GN+ L C T G+++ CNS G+C C+ + G
Sbjct: 930 QCNQCKPGF---YVSPGNKTGCL-PCSCHT-----AGAVHQVCNSLTGQCICQGASIIGQ 980
Query: 194 KCDRCDVNHYDFGE-AG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CD C +++ F AG C+ C C+ G++ + C V GQC CK V G +C
Sbjct: 981 RCDHCKDHYFGFDPLAGRCQPCNCHLPGALNGS--CHLVTGQCFCKQFVTGLKC 1032
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 24 GHCLDCQGDRD-GPNCEKCRDNYYQ-KSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
G C+ CQG G C+ C+D+Y+ C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCI-CQGASIIGQRCDHCKDHYFGFDPLAGRCQPCNCHLPGALNGSCHLVTGQCFCKQF 1026
Query: 81 VTGDKCDRC--DVNHYD----FGEAGCKSCECNPAGSVKNT 115
VTG KCD C +H D FG + S + P G V+++
Sbjct: 1027 VTGLKCDDCVPGASHLDIHNLFGCSKTPSQQPPPRGQVQSS 1067
>gi|354481424|ref|XP_003502901.1| PREDICTED: laminin subunit gamma-1 [Cricetulus griseus]
gi|344252604|gb|EGW08708.1| Laminin subunit gamma-1 [Cricetulus griseus]
Length = 1559
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG CE+CR+N+++ C+ C+C+
Sbjct: 292 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCS 351
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C CNP+GS T C+
Sbjct: 352 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCNPSGS---TDECNV 408
Query: 121 VKGQC 125
G+C
Sbjct: 409 ETGRC 413
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 331 RCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 390
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP+GS T C+ G+C CKDNVEG C
Sbjct: 391 GCRPCSCNPSGS---TDECNVETGRCVCKDNVEGFSC 424
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 742 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND----NIDPNAVGNCNRLTG 797
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCE- 126
+C G CDRC + A CK+C CNP G+V+ +C+ V GQCE
Sbjct: 798 ECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCEC 857
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRC 184
+S R E P + + C+R D + LG S N QC+ + G+C
Sbjct: 858 LPHVSGRDCGACE----------PGFYNLQSGQGCERCDCHALG---STNGQCDIQTGQC 904
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+C+PG+TG C+RC+ NH+ FG GCK C+C+ GS+ D G+CEC++ G +
Sbjct: 905 ECQPGITGQHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDD---GRCECREGFVGNR 961
Query: 245 C 245
C
Sbjct: 962 C 962
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 23/199 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C++ ++ + + C AC CNP G++ Q CN G+C+
Sbjct: 797 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCE 856
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V+G C C+ Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 857 CLPHVSGRDCGACEPGFYNLQSGQGCERCDCHALGSTNG--QCDIQTGQCE-CQPGITGQ 913
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D H GSL+LQC +GRC+C+ G G++C
Sbjct: 914 -HCERCETNHFGFGPEGCKPCDCH----------HEGSLSLQCKDDGRCECREGFVGNRC 962
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 963 DQCEENYFYNRSWPGCQEC 981
>gi|432089379|gb|ELK23330.1| Laminin subunit gamma-1 [Myotis davidii]
Length = 1561
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY T HGGHC +CQ + DG +CE+CR+N+++ C+ C+C+
Sbjct: 248 CDCNGRSRECYFDPELYRSTSHGGHCTNCQDNTDGAHCERCRENFFRLGNTEPCSPCHCS 307
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C CNPAGS T C+
Sbjct: 308 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCACNPAGS---TDECNV 364
Query: 121 VKGQC 125
G+C
Sbjct: 365 ETGRC 369
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 287 RCRENFFRLGNTEPCSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 346
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNPAGS T C+ G+C CKDNVEG C
Sbjct: 347 GCRPCACNPAGS---TDECNVETGRCVCKDNVEGFNC 380
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 110/245 (44%), Gaps = 49/245 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
C +C G CE C D Y+ GD C C CN N+ N+ G C
Sbjct: 698 CTNCPTGTTGKRCELCDDGYF---GDPQGTHGPVRLCRLCQCNA----NIDPNAVGNCNR 750
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQ 124
+C G CDRC + A CK+C+CNP G+ + C V GQ
Sbjct: 751 LTGECLKCIYNTAGFYCDRCKDGFFGNPLAPSPADKCKACDCNPYGTSRQQSGCSPVTGQ 810
Query: 125 CESAQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
CE V R +P + + C+R D + LG S N QC+
Sbjct: 811 CECLP-----------HVTGRDCGACEPGFYNLHSGQGCQRCDCHALG---STNGQCDIR 856
Query: 182 -GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++
Sbjct: 857 TGQCECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGF 913
Query: 241 EGAQC 245
G +C
Sbjct: 914 VGNRC 918
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 100/200 (50%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C + G C++C+D ++ S + C AC+CNP G+ Q G+C+
Sbjct: 753 GECLKCIYNTAGFYCDRCKDGFFGNPLAPSPADKCKACDCNPYGTSRQQSGCSPVTGQCE 812
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C C+ Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 813 CLPHVTGRDCGACEPGFYNLHSGQGCQRCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 869
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 870 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 917
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 918 CDQCEENYFYNRSWPGCQEC 937
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 109/259 (42%), Gaps = 31/259 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG S C D E G C +C+ + GPNCEKC D YY + C C
Sbjct: 630 CTCNGHSETC--DPET-------GVC-NCRDNTAGPNCEKCSDGYYGDPTAGTSSDCQPC 679
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 680 PC-PGGSSCAVVPTTQEVVCTNCPTGTTGKRCELCDDGYFGDPQGTHGPVRLCRLCQCNA 738
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
NC+ + G+C ++ G R + +P D +CK D P
Sbjct: 739 NIDPNAVGNCNRLTGECLKCIYNTAGFYCD--RCKDGFFGNPLAPSPAD--KCKACDCNP 794
Query: 168 LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPN 226
G + G+C+C P VTG C C+ Y+ GC+ C+C+ GS
Sbjct: 795 YGTSRQQSGCSPVTGQCECLPHVTGRDCGACEPGFYNLHSGQGCQRCDCHALGSTNG--Q 852
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 853 CDIRTGQCECQPGITGQHC 871
>gi|431915939|gb|ELK16193.1| Laminin subunit gamma-1 [Pteropus alecto]
Length = 1476
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 81/112 (72%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ C+ C+C+
Sbjct: 209 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGASCERCRENFFRLGNKEACSPCHCS 268
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCD C + EAGC+ C CNP+GS+
Sbjct: 269 PVGSLSTQCDSYGRCSCKPGVMGDKCDHCQPGFHSLTEAGCRPCSCNPSGSI 320
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 113/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 659 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND----NIDPNAVGNCNRLTG 714
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+++ NC+ V GQCE
Sbjct: 715 ECLKCIYNTAGFYCDRCKNGFFGNPLAPNPADKCKACNCNPYGTMQQQSNCNPVTGQCEC 774
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGR 183
V R + DP + + C+R D + LG S N QC+ G+
Sbjct: 775 LP-----------HVTGRDCGSCDPGFYNLQGGQGCERCDCHALG---STNGQCDIRSGQ 820
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GSV D G+CEC++ G
Sbjct: 821 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSVSLQCKDD---GRCECREGFVGN 877
Query: 244 QC 245
+C
Sbjct: 878 RC 879
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C + G C++C++ ++ + + C ACNCNP G++ Q N G+C+
Sbjct: 714 GECLKCIYNTAGFYCDRCKNGFFGNPLAPNPADKCKACNCNPYGTMQQQSNCNPVTGQCE 773
Query: 77 CKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ G GC+ C+C+ GS CD GQCE Q G+
Sbjct: 774 CLPHVTGRDCGSCDPGFYNLQGGQGCERCDCHALGSTNG--QCDIRSGQCE-CQPGITGQ 830
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GS++LQC +GRC+C+ G G++
Sbjct: 831 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSVSLQCKDDGRCECREGFVGNR 878
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CDRC+ N+ Y+ GC+ C
Sbjct: 879 CDRCEENYFYNRSWPGCQEC 898
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 57/97 (58%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCD C + EA
Sbjct: 248 RCRENFFRLGNKEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDHCQPGFHSLTEA 307
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP+GS+ C+ G+C CKDNVEG C
Sbjct: 308 GCRPCSCNPSGSID---ECNIETGRCVCKDNVEGFNC 341
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 110/276 (39%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG---DNFCTAC 57
C CNG S C D E G C +C+ + GP CE+C D YY S + C C
Sbjct: 591 CACNGHSETC--DPET-------GVC-NCRDNTAGPQCERCSDGYYGDSSLGTSSDCQPC 640
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 641 PC-PGGSSCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 699
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 700 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKNGFFGN 738
Query: 167 PLGHG-------------GSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDF-GEAG 209
PL G++ Q N G+C+C P VTG C CD Y+ G G
Sbjct: 739 PLAPNPADKCKACNCNPYGTMQQQSNCNPVTGQCECLPHVTGRDCGSCDPGFYNLQGGQG 798
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ GS CD GQCEC+ + G C
Sbjct: 799 CERCDCHALGSTNG--QCDIRSGQCECQPGITGQHC 832
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 23/104 (22%)
Query: 167 PLGHGGSLNL----QCNS-------------EGRC-QCKPGVTGDKCDRCDVNHYDFGEA 208
PLG G + L QCN G C +C G CDRC + A
Sbjct: 682 PLGRNGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKNGFFGNPLA 741
Query: 209 -----GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
CK+C CNP G+++ NC+ V GQCEC +V G C S
Sbjct: 742 PNPADKCKACNCNPYGTMQQQSNCNPVTGQCECLPHVTGRDCGS 785
>gi|326924732|ref|XP_003208579.1| PREDICTED: laminin subunit gamma-1-like [Meleagris gallopavo]
Length = 1571
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC C+ + DG +CE+CRD++Y+ + C C+CN
Sbjct: 304 CDCNGRSQECYFDPELYRSTGHGGHCSGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCN 363
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S G+C CKPGV G+KCDRC + EAGC+ C CNPAGS T C+
Sbjct: 364 PVGSLSTQCDSYGQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCNPAGS---TGECNM 420
Query: 121 VKGQC 125
G+C
Sbjct: 421 ETGRC 425
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 113/241 (46%), Gaps = 41/241 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C CQ G CE C D Y+ G+N C C CN N+ N+ G C
Sbjct: 754 CTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCND----NIDPNAVGNCNRQTG 809
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCE- 126
+C G CDRC + A C++C CNP G+V +C+ V GQCE
Sbjct: 810 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACHCNPYGTVNQQTSCNQVTGQCEC 869
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRC 184
+ ++ R E P + R C+R D + LG S N QC+ G+C
Sbjct: 870 LSHVTERDCSACE----------PGFFNLQSGRGCERCDCHALG---STNGQCDIWTGQC 916
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+C+PGVTG +CDRC+ NH+ FG GCK C+C+P GS C G+CECK+ G +
Sbjct: 917 ECQPGVTGQRCDRCEANHFGFGPEGCKPCDCDPEGS--RALQCRE-DGRCECKEGFVGNR 973
Query: 245 C 245
C
Sbjct: 974 C 974
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC+S G+C CKPGV G+KCDRC + EAGC+ C CNPAGS T C+
Sbjct: 366 GSLSTQCDSYGQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCNPAGS---TGECNMET 422
Query: 232 GQCECKDNVEGAQC 245
G+C CKDNVEG C
Sbjct: 423 GRCTCKDNVEGFHC 436
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTG 83
CL +RD C C ++ C C+C+ +GS N QC+ G+C+C+PGVTG
Sbjct: 868 ECLSHVTERD---CSACEPGFFNLQSGRGCERCDCHALGSTNGQCDIWTGQCECQPGVTG 924
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGS 111
+CDRC+ NH+ FG GCK C+C+P GS
Sbjct: 925 QRCDRCEANHFGFGPEGCKPCDCDPEGS 952
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 35/205 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++N Q CN G+C+
Sbjct: 809 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACHCNPYGTVNQQTSCNQVTGQCE 868
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE-----SAQL 130
C VT C C+ ++ GC+ C+C+ GS CD GQCE + Q
Sbjct: 869 CLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNG--QCDIWTGQCECQPGVTGQR 926
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPG 189
R + F P G CK D P GS LQC +GRC+CK G
Sbjct: 927 CDRCEAN-------HFGFGPEG--------CKPCDCDP---EGSRALQCREDGRCECKEG 968
Query: 190 VTGDKCDRCDVNH-YDFGEAGCKSC 213
G++CD+C+ N+ Y+ GC+ C
Sbjct: 969 FVGNRCDQCEENYFYNRSWPGCQEC 993
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 111/263 (42%), Gaps = 39/263 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC-TACNC 59
C+CNG S C D E G C DC+ + G CEKC D YY GD TA +C
Sbjct: 686 CSCNGHSETC--DPET-------GVC-DCRDNTAGSQCEKCSDGYY---GDATAGTALDC 732
Query: 60 NP---IGSLNLQCNSEGR----CQCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCEC 106
P G + R C+ G TG +C+ CD ++ GE G C+ C+C
Sbjct: 733 QPCPCPGGSSCAVVPRTREVVCTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQC 792
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
N NC+ G+C ++ G + N A N R C + Y
Sbjct: 793 NDNIDPNAVGNCNRQTGECLKCIYNTAGFYCDRCKDGFFGN-PLAPNPADKCRACHCNPY 851
Query: 167 PLGHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVK 222
G++N Q CN G+C+C VT C C+ ++ GC+ C+C+ GS
Sbjct: 852 -----GTVNQQTSCNQVTGQCECLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTN 906
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ V G +C
Sbjct: 907 G--QCDIWTGQCECQPGVTGQRC 927
>gi|170584498|ref|XP_001897036.1| Laminin-like protein C54D1.5 precursor [Brugia malayi]
gi|158595571|gb|EDP34114.1| Laminin-like protein C54D1.5 precursor, putative [Brugia malayi]
Length = 1634
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 86/125 (68%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ SNRC+FD+ L+ RTG GGHC+DC G+ G +CE+C +++ G+++C C CN
Sbjct: 362 CNCSHLSNRCYFDQALFERTGSGGHCIDCAGNTQGAHCEECAPFNWRRPGEHYCIPCQCN 421
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGSL++QC+ G+C CKPGV G CDRC +Y F +GCK+C C+ GS+ N P CDS
Sbjct: 422 EIGSLSMQCDDHGQCPCKPGVDGHFCDRCMSGYYGFSISGCKNCLCDKTGSLNNEPVCDS 481
Query: 121 VKGQC 125
G C
Sbjct: 482 ETGSC 486
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 50/74 (67%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL++QC+ G+C CKPGV G CDRC +Y F +GCK+C C+ GS+ N P CDS
Sbjct: 424 GSLSMQCDDHGQCPCKPGVDGHFCDRCMSGYYGFSISGCKNCLCDKTGSLNNEPVCDSET 483
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 484 GSCSCKLNVEGQQC 497
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C +CQ G C++C+ Y+ + + C CNC+ +GS+N C+ G+C CK GV
Sbjct: 915 GQC-NCQPHVIGSRCDQCQPGYFNLTSGSGCQECNCDVLGSVNSTCDVLTGQCLCKAGVM 973
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +CD+C+ HY FG GC+ C+C GS +P CD + GQC
Sbjct: 974 GRRCDQCEPQHYGFGLDGCQPCDCEVIGS--ESPQCDVITGQC 1014
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 112/247 (45%), Gaps = 52/247 (21%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGRC--------Q 76
C DC G C+ C D ++ G+ C C+C S N+ NS G C +
Sbjct: 804 CTDCPTGYTGRRCDVCADGFFGNPGEGKSCVECSC----SGNIDPNSIGNCDSLTGECKK 859
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C G C+ C ++ G+A CK+C C G+ ++ N D V +C
Sbjct: 860 CIYDTVGFNCEECKPGYW--GDALLEPKGDCKACNCFAPGTKRS--NVDYVLLECRQ--- 912
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCN 179
S G+ + + V G+R +C+ + L G GS+N C+
Sbjct: 913 -SDGQCNCQPHV--------IGSRC---DQCQPGYFNLTSGSGCQECNCDVLGSVNSTCD 960
Query: 180 S-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK GV G +CD+C+ HY FG GC+ C+C GS +P CD + GQC C+D
Sbjct: 961 VLTGQCLCKAGVMGRRCDQCEPQHYGFGLDGCQPCDCEVIGS--ESPQCDVITGQCLCRD 1018
Query: 239 NVEGAQC 245
++EG +C
Sbjct: 1019 HIEGRRC 1025
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 52/216 (24%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGS-------LNLQC-N 70
G C C D G NCE+C+ Y+ + GD C ACNC G+ + L+C
Sbjct: 855 GECKKCIYDTVGFNCEECKPGYWGDALLEPKGD--CKACNCFAPGTKRSNVDYVLLECRQ 912
Query: 71 SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
S+G+C C+P V G +CD+C +++ +GC+ C C+ GSV +T CD + GQC
Sbjct: 913 SDGQCNCQPHVIGSRCDQCQPGYFNLTSGSGCQECNCDVLGSVNST--CDVLTGQC---- 966
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCN 179
L G V R+ +C+ Y G G S + QC+
Sbjct: 967 LCKAG-------VMGRR-----------CDQCEPQHYGFGLDGCQPCDCEVIGSESPQCD 1008
Query: 180 S-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G+C C+ + G +CD C N Y+ +AGC C+
Sbjct: 1009 VITGQCLCRDHIEGRRCDHCIENRYNL-QAGCLPCD 1043
>gi|351701143|gb|EHB04062.1| Laminin subunit gamma-1 [Heterocephalus glaber]
Length = 1573
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG NCE+C +N+++ C+ C+C+
Sbjct: 306 CDCNGRSEECYFDPELYRSTGHGGHCTNCRDNTDGANCERCLENFFRFGNSEACSPCHCS 365
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C CNP+GS T C+
Sbjct: 366 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCHPGFHSLTEAGCRPCSCNPSGS---TDECNV 422
Query: 121 VKGQC 125
G+C
Sbjct: 423 ETGRC 427
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 110/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDN-----FCTACNCNPIGSLNLQCNSEGRC----- 75
C C G CE C D Y+ N C C CN N+ N+ G C
Sbjct: 756 CTTCPVGTTGKRCELCDDGYFGDPQGNSGPVRLCRPCQCND----NIDPNAVGNCNRLTG 811
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+VK +C+ V GQCE
Sbjct: 812 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQRSCNPVTGQCEC 871
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 872 LP-----------HVAGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRSGQ 917
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 918 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 974
Query: 244 QC 245
+C
Sbjct: 975 RC 976
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C CNP+GS T C+
Sbjct: 368 GSLSTQCDSYGRCSCKPGVMGDKCDRCHPGFHSLTEAGCRPCSCNPSGS---TDECNVET 424
Query: 232 GQCECKDNVEGAQC 245
G+C CKDNVEG C
Sbjct: 425 GRCVCKDNVEGFNC 438
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q CN G+C+
Sbjct: 811 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVKQQRSCNPVTGQCE 870
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V G C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 871 CLPHVAGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRSGQCE-CQPGITGQ 927
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 928 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 975
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 976 CDQCEENYFYNRSWPGCQEC 995
>gi|410267246|gb|JAA21589.1| laminin, gamma 1 (formerly LAMB2) [Pan troglodytes]
Length = 1609
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 82/112 (73%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 342 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 401
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDK DRC + EAGC+ C C+P+GS+
Sbjct: 402 PVGSLSTQCDSYGRCSCKPGVMGDKWDRCQPGFHSLTEAGCRPCSCDPSGSI 453
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 112/242 (46%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C C S N+ N+ G C
Sbjct: 792 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQC----SDNIDPNAVGNCNRLTG 847
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G++K +C+ V GQCE
Sbjct: 848 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCEC 907
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 908 LP-----------HVTGRDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 953
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G
Sbjct: 954 CECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGN 1010
Query: 244 QC 245
+C
Sbjct: 1011 RC 1012
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 103/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCNP G++ Q CN G+C+
Sbjct: 847 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCE 906
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 907 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 963
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 964 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1011
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1012 CDQCEENYFYNRSWPGCQEC 1031
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDK DRC + EA
Sbjct: 381 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKWDRCQPGFHSLTEA 440
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 441 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 474
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 111/276 (40%), Gaps = 65/276 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 724 CACNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 773
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+C+
Sbjct: 774 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSD 832
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-- 166
NC+ + G+C ++ G + RCK +
Sbjct: 833 NIDPNAVGNCNRLTGECLKCIYNTAG---------------------FYCDRCKDGFFGN 871
Query: 167 PLGHG-------------GSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
PL G++ Q CN G+C+C P VTG C CD Y+ G
Sbjct: 872 PLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQG 931
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ GS CD GQCEC+ + G C
Sbjct: 932 CERCDCHALGSTNG--QCDIRTGQCECQPGITGQHC 965
>gi|393912426|gb|EJD76731.1| CBR-LAM-2 protein [Loa loa]
Length = 1628
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 91/135 (67%), Gaps = 1/135 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ SNRC+FD+ L+ TG GGHC+DC G+ G +CE+C +++ G+++C C CN
Sbjct: 342 CNCSHLSNRCYFDQTLFEHTGSGGHCIDCAGNTQGAHCEECAPFNWRRPGEHYCIPCQCN 401
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGSL +QC+ G+C CKPGV G CDRC +Y+F +GCK+C C+ AGS+ N CDS
Sbjct: 402 EIGSLGMQCDEHGQCPCKPGVNGQFCDRCMSGYYEFSISGCKNCLCDKAGSLNNESVCDS 461
Query: 121 VKGQCESAQLSSRGR 135
G C S +L+ GR
Sbjct: 462 ETGSC-SCKLNVEGR 475
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 50/74 (67%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL +QC+ G+C CKPGV G CDRC +Y+F +GCK+C C+ AGS+ N CDS
Sbjct: 404 GSLGMQCDEHGQCPCKPGVNGQFCDRCMSGYYEFSISGCKNCLCDKAGSLNNESVCDSET 463
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 464 GSCSCKLNVEGRQC 477
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C +CQ G C++C+ Y+ + + C C+C+ +GS+N C+ G+C CKPGV
Sbjct: 909 GQC-NCQPHVIGIQCDQCQPGYFNLTSGSGCQECSCDVLGSVNSTCDVLTGQCLCKPGVM 967
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +CD+C+ +Y FG GC+ C+C GS +P CD + GQC
Sbjct: 968 GRRCDQCEPQYYGFGIDGCEPCDCEVIGS--ESPQCDVITGQC 1008
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 109/247 (44%), Gaps = 52/247 (21%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCNSEGRC--------Q 76
C DC G C+ C D ++ S C C C S N+ NS G C +
Sbjct: 798 CTDCPTGYTGRRCDVCADGFFGNPSEGKLCVECLC----SGNIDPNSIGNCDSLTGECKK 853
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C TG C+ C ++ G+A CK+C C G+ + PN D V +C+
Sbjct: 854 CIYDTTGFNCEECKPGYW--GDALLEPKGDCKACNCFAPGTKR--PNVDYVVLECQQNDG 909
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCN 179
+ H + +Q + C+ + L G GS+N C+
Sbjct: 910 QCNCQPHV-IGIQCDQ--------------CQPGYFNLTSGSGCQECSCDVLGSVNSTCD 954
Query: 180 S-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CKPGV G +CD+C+ +Y FG GC+ C+C GS +P CD + GQC C++
Sbjct: 955 VLTGQCLCKPGVMGRRCDQCEPQYYGFGIDGCEPCDCEVIGS--ESPQCDVITGQCLCRN 1012
Query: 239 NVEGAQC 245
++EG +C
Sbjct: 1013 HIEGRRC 1019
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 52/216 (24%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGS-------LNLQCNS 71
G C C D G NCE+C+ Y+ + GD C ACNC G+ + L+C
Sbjct: 849 GECKKCIYDTTGFNCEECKPGYWGDALLEPKGD--CKACNCFAPGTKRPNVDYVVLECQQ 906
Query: 72 -EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+G+C C+P V G +CD+C +++ +GC+ C C+ GSV +T CD + GQC
Sbjct: 907 NDGQCNCQPHVIGIQCDQCQPGYFNLTSGSGCQECSCDVLGSVNST--CDVLTGQC---- 960
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCN 179
L G V R+ +C+ Y G G S + QC+
Sbjct: 961 LCKPG-------VMGRR-----------CDQCEPQYYGFGIDGCEPCDCEVIGSESPQCD 1002
Query: 180 S-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G+C C+ + G +CD C N Y+ +AGC C+
Sbjct: 1003 VITGQCLCRNHIEGRRCDHCIENRYNL-QAGCLPCD 1037
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 115/263 (43%), Gaps = 40/263 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTA 56
C C+G S C G C+ C+ + G CE+C YY Q + D+ CT
Sbjct: 731 CECHGHSTSC---------APESGECI-CEHNTAGDTCERCTRGYYGNALQGTPDD-CTK 779
Query: 57 CNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV--K 113
C C G L + + C C G TG +CD C + G EC +G++
Sbjct: 780 CPCPEDGPCVLHTDGDIICTDCPTGYTGRRCDVCADGFFGNPSEGKLCVECLCSGNIDPN 839
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRC-------KRD 164
+ NCDS+ G+C+ + G E + +P G D + C KR
Sbjct: 840 SIGNCDSLTGECKKCIYDTTGFNCEECKPGYWGDALLEPKG----DCKACNCFAPGTKRP 895
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVK 222
+ L+C +G+C C+P V G +CD+C +++ +GC+ C C+ GSV
Sbjct: 896 NVDY-----VVLECQQNDGQCNCQPHVIGIQCDQCQPGYFNLTSGSGCQECSCDVLGSVN 950
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+T CD + GQC CK V G +C
Sbjct: 951 ST--CDVLTGQCLCKPGVMGRRC 971
>gi|149058392|gb|EDM09549.1| laminin, gamma 1 [Rattus norvegicus]
Length = 1543
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG CE+CR+N+++ C+ C+C+
Sbjct: 340 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCS 399
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS T C+
Sbjct: 400 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGS---TDECNV 456
Query: 121 VKGQC 125
G+C
Sbjct: 457 ETGRC 461
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 379 RCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 438
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS T C+ G+C CKDNVEG C
Sbjct: 439 GCRPCSCDPSGS---TDECNVETGRCVCKDNVEGFSC 472
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C++ ++ + + C AC CNP G++ Q CN G+CQ
Sbjct: 771 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQ 830
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V+G C CD Y+ GC+SC+C+ GS CD GQCE Q G+
Sbjct: 831 CLPHVSGRDCGACDPGFYNLQSGQGCESCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 887
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D H GSL+LQC +GRC+C+ G G++C
Sbjct: 888 -HCERCETNHFGFGPEGCKPCDCH----------HEGSLSLQCKDDGRCECREGFVGNRC 936
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 937 DQCEENYFYNRSWPGCQEC 955
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 110/243 (45%), Gaps = 45/243 (18%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 716 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND----NIDPNAVGNCNRLTG 771
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCE- 126
+C G CDRC + A CK+C CNP G+V+ +C+ V GQC+
Sbjct: 772 ECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQC 831
Query: 127 SAQLSSR--GRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-G 182
+S R G DP + + C+ D + LG S N QC+ G
Sbjct: 832 LPHVSGRDCGAC------------DPGFYNLQSGQGCESCDCHALG---STNGQCDIRTG 876
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+C+C+PG+TG C+RC+ NH+ FG GCK C+C+ GS+ D G+CEC++ G
Sbjct: 877 QCECQPGITGQHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDD---GRCECREGFVG 933
Query: 243 AQC 245
+C
Sbjct: 934 NRC 936
>gi|148707495|gb|EDL39442.1| laminin, gamma 1, isoform CRA_b [Mus musculus]
Length = 1624
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG CE+CR+N+++ C+ C+C+
Sbjct: 357 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCS 416
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS T C+
Sbjct: 417 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGS---TDECNV 473
Query: 121 VKGQC 125
G+C
Sbjct: 474 ETGRC 478
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 396 RCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 455
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS T C+ G+C CKDNVEG C
Sbjct: 456 GCRPCSCDPSGS---TDECNVETGRCVCKDNVEGFNC 489
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C++ ++ + + C AC CNP G++ Q CN G+CQ
Sbjct: 862 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQ 921
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V+G C CD +Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 922 CLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 978
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D H GSL+LQC +GRC+C+ G G++C
Sbjct: 979 -HCERCETNHFGFGPEGCKPCDCH----------HEGSLSLQCKEDGRCECREGFVGNRC 1027
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 1028 DQCEENYFYNRSWPGCQEC 1046
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 807 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND----NIDPNAVGNCNRLTG 862
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+V+ +C+ V GQC+
Sbjct: 863 ECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQC 922
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 923 LP-----------HVSGRDCGTCDPGYYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 968
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+ NH+ FG GCK C+C+ GS+ D G+CEC++ G
Sbjct: 969 CECQPGITGQHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKED---GRCECREGFVGN 1025
Query: 244 QC 245
+C
Sbjct: 1026 RC 1027
>gi|148707494|gb|EDL39441.1| laminin, gamma 1, isoform CRA_a [Mus musculus]
Length = 1492
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG CE+CR+N+++ C+ C+C+
Sbjct: 292 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCS 351
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS T C+
Sbjct: 352 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGS---TDECNV 408
Query: 121 VKGQC 125
G+C
Sbjct: 409 ETGRC 413
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 331 RCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 390
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS T C+ G+C CKDNVEG C
Sbjct: 391 GCRPCSCDPSGS---TDECNVETGRCVCKDNVEGFNC 424
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C++ ++ + + C AC CNP G++ Q CN G+CQ
Sbjct: 723 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQ 782
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V+G C CD +Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 783 CLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 839
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D H GSL+LQC +GRC+C+ G G++C
Sbjct: 840 -HCERCETNHFGFGPEGCKPCDCH----------HEGSLSLQCKEDGRCECREGFVGNRC 888
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 889 DQCEENYFYNRSWPGCQEC 907
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 668 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND----NIDPNAVGNCNRLTG 723
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+V+ +C+ V GQC+
Sbjct: 724 ECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQC 783
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 784 LP-----------HVSGRDCGTCDPGYYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 829
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+ NH+ FG GCK C+C+ GS+ D G+CEC++ G
Sbjct: 830 CECQPGITGQHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKED---GRCECREGFVGN 886
Query: 244 QC 245
+C
Sbjct: 887 RC 888
>gi|293691|gb|AAA39408.1| laminin B2 [Mus musculus]
Length = 1605
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG CE+CR+N+++ C+ C+C+
Sbjct: 340 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCS 399
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS T C+
Sbjct: 400 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGS---TDECNV 456
Query: 121 VKGQC 125
G+C
Sbjct: 457 ETGRC 461
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 379 RCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 438
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS T C+ G+C CKDNVEG C
Sbjct: 439 GCRPCSCDPSGS---TDECNVETGRCVCKDNVEGFNC 472
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 100/199 (50%), Gaps = 24/199 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C++ ++ + + C AC CN G++ Q CN G+CQ
Sbjct: 845 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACN-YGTVQQQSSCNPVTGQCQ 903
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V+G C CD +Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 904 CLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 960
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D H GSL+LQC +GRC+C+ G G++C
Sbjct: 961 -HCERCETNHFGFGPEGCKPCDCH----------HEGSLSLQCKDDGRCECREGFVGNRC 1009
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 1010 DQCEENYFYNRSWPGCQEC 1028
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 108/242 (44%), Gaps = 44/242 (18%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 790 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND----NIDPNAVGNCNRLTG 845
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CN G+V+ +C+ V GQC+
Sbjct: 846 ECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACN-YGTVQQQSSCNPVTGQCQC 904
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 905 LP-----------HVSGRDCGTCDPGYYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 950
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+ NH+ FG GCK C+C+ GS+ D G+CEC++ G
Sbjct: 951 CECQPGITGQHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDD---GRCECREGFVGN 1007
Query: 244 QC 245
+C
Sbjct: 1008 RC 1009
>gi|153791270|ref|NP_034813.2| laminin subunit gamma-1 precursor [Mus musculus]
gi|183396925|gb|AAI65945.1| Laminin, gamma 1 [synthetic construct]
Length = 1607
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG CE+CR+N+++ C+ C+C+
Sbjct: 340 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCS 399
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS T C+
Sbjct: 400 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGS---TDECNV 456
Query: 121 VKGQC 125
G+C
Sbjct: 457 ETGRC 461
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C++ ++ + + C AC CNP G++ Q CN G+CQ
Sbjct: 845 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQ 904
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V+G C CD +Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 905 CLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 961
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D H GSL+LQC +GRC+C+ G G++C
Sbjct: 962 -HCERCETNHFGFGPEGCKPCDCH----------HEGSLSLQCKEDGRCECREGFVGNRC 1010
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 1011 DQCEENYFYNRSWPGCQEC 1029
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 379 RCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 438
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS T C+ G+C CKDNVEG C
Sbjct: 439 GCRPCSCDPSGS---TDECNVETGRCVCKDNVEGFNC 472
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 790 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND----NIDPNAVGNCNRLTG 845
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+V+ +C+ V GQC+
Sbjct: 846 ECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQC 905
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 906 LP-----------HVSGRDCGTCDPGYYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 951
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+ NH+ FG GCK C+C+ GS+ D G+CEC++ G
Sbjct: 952 CECQPGITGQHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKED---GRCECREGFVGN 1008
Query: 244 QC 245
+C
Sbjct: 1009 RC 1010
>gi|281371490|ref|NP_446418.1| laminin, gamma 1 precursor [Rattus norvegicus]
Length = 1607
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG CE+CR+N+++ C+ C+C+
Sbjct: 340 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCS 399
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS T C+
Sbjct: 400 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGS---TDECNV 456
Query: 121 VKGQC 125
G+C
Sbjct: 457 ETGRC 461
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C++ ++ + + C AC CNP G++ Q CN G+CQ
Sbjct: 845 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQ 904
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V+G C CD Y+ GC+SC+C+ GS CD GQCE Q G+
Sbjct: 905 CLPHVSGRDCGACDPGFYNLQSGQGCESCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 961
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D H GSL+LQC +GRC+C+ G G++C
Sbjct: 962 -HCERCETNHFGFGPEGCKPCDCH----------HEGSLSLQCKDDGRCECREGFVGNRC 1010
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 1011 DQCEENYFYNRSWPGCQEC 1029
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 379 RCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 438
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS T C+ G+C CKDNVEG C
Sbjct: 439 GCRPCSCDPSGS---TDECNVETGRCVCKDNVEGFSC 472
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 110/243 (45%), Gaps = 45/243 (18%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 790 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND----NIDPNAVGNCNRLTG 845
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCE- 126
+C G CDRC + A CK+C CNP G+V+ +C+ V GQC+
Sbjct: 846 ECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQC 905
Query: 127 SAQLSSR--GRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-G 182
+S R G DP + + C+ D + LG S N QC+ G
Sbjct: 906 LPHVSGRDCGAC------------DPGFYNLQSGQGCESCDCHALG---STNGQCDIRTG 950
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+C+C+PG+TG C+RC+ NH+ FG GCK C+C+ GS+ D G+CEC++ G
Sbjct: 951 QCECQPGITGQHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDD---GRCECREGFVG 1007
Query: 243 AQC 245
+C
Sbjct: 1008 NRC 1010
>gi|380805819|gb|AFE74785.1| laminin subunit gamma-1 precursor, partial [Macaca mulatta]
Length = 361
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 83/112 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C+ C+C+
Sbjct: 196 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCS 255
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 256 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 307
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 235 RCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 294
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 295 GCRPCSCDPSGSID---ECNVETGRCVCKDNVEGFNC 328
>gi|312080980|ref|XP_003142832.1| LAM-2 [Loa loa]
Length = 947
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 91/135 (67%), Gaps = 1/135 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ SNRC+FD+ L+ TG GGHC+DC G+ G +CE+C +++ G+++C C CN
Sbjct: 363 CNCSHLSNRCYFDQTLFEHTGSGGHCIDCAGNTQGAHCEECAPFNWRRPGEHYCIPCQCN 422
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGSL +QC+ G+C CKPGV G CDRC +Y+F +GCK+C C+ AGS+ N CDS
Sbjct: 423 EIGSLGMQCDEHGQCPCKPGVNGQFCDRCMSGYYEFSISGCKNCLCDKAGSLNNESVCDS 482
Query: 121 VKGQCESAQLSSRGR 135
G C S +L+ GR
Sbjct: 483 ETGSC-SCKLNVEGR 496
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 50/74 (67%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL +QC+ G+C CKPGV G CDRC +Y+F +GCK+C C+ AGS+ N CDS
Sbjct: 425 GSLGMQCDEHGQCPCKPGVNGQFCDRCMSGYYEFSISGCKNCLCDKAGSLNNESVCDSET 484
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 485 GSCSCKLNVEGRQC 498
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGS-------LNLQCNS 71
G C C D G NCE+C+ Y+ + GD C ACNC G+ + L+C
Sbjct: 870 GECKKCIYDTTGFNCEECKPGYWGDALLEPKGD--CKACNCFAPGTKRPNVDYVVLECQQ 927
Query: 72 -EGRCQCKPGVTGDKCDRC 89
+G+C C+P V G +CD+C
Sbjct: 928 NDGQCNCQPHVIGIQCDQC 946
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 93/259 (35%), Gaps = 81/259 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTA 56
C C+G S C G C+ C+ + G CE+C YY Q + D+ CT
Sbjct: 752 CECHGHSTSC---------APESGECI-CEHNTAGDTCERCTRGYYGNALQGTPDD-CTK 800
Query: 57 CNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV--K 113
C C G L + + C C G TG +CD C + G EC +G++
Sbjct: 801 CPCPEDGPCVLHTDGDIICTDCPTGYTGRRCDVCADGFFGNPSEGKLCVECLCSGNIDPN 860
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
+ NCDS+ G+C ++C DT
Sbjct: 861 SIGNCDSLTGEC---------------------------------KKCIYDT-------- 879
Query: 174 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV--- 230
C +CKPG GD + CK+C C G+ + PN D V
Sbjct: 880 TGFNCE-----ECKPGYWGDALLE--------PKGDCKACNCFAPGTKR--PNVDYVVLE 924
Query: 231 ----KGQCECKDNVEGAQC 245
GQC C+ +V G QC
Sbjct: 925 CQQNDGQCNCQPHVIGIQC 943
>gi|291224195|ref|XP_002732092.1| PREDICTED: usherin-like [Saccoglossus kowalevskii]
Length = 5112
Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats.
Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 29/262 (11%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF- 53
C C G + C + + +NR G GG C +CQ + G C++C+ NYY++ G +
Sbjct: 561 CECYGHATSCSYIESEDPFPNDHNRGG-GGVCTNCQHNTAGNRCDQCKTNYYRELGKSLD 619
Query: 54 ----CTACNCNPIGSLNLQCNSE--GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C+AC+CN G ++ ++ G+C CK VTG +CD C +Y+ + GC SC
Sbjct: 620 AIDVCSACSCNIAGVVDGGDCAKVGGQCNCKLYVTGRQCDTCKTGYYNLQSSNVNGCSSC 679
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
C+PAGS+ + +C G C ++ ++ KN D N C D
Sbjct: 680 VCSPAGSI-GSGSCQQNTGDCVCK--TNVIGINCNQCNYGYKNLDI--NNPLGCDPCNCD 734
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
+ GS + C+ G+CQC+ G +C+ C N+Y GCK C+C+P+GS+
Sbjct: 735 PF-----GSTSQYCDPVSGQCQCQLTTMGLQCNSCKDNYYGLDSGGCKPCDCDPSGSLPG 789
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD V GQC CK NV+G +C
Sbjct: 790 I-TCDQVTGQCVCKANVQGTKC 810
Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats.
Identities = 77/252 (30%), Positives = 112/252 (44%), Gaps = 52/252 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
G C+ C+ + G NC +C Y +N C CNC+P GS + C+ G+CQC+
Sbjct: 697 GDCV-CKTNVIGINCNQCNYGYKNLDINNPLGCDPCNCDPFGSTSQYCDPVSGQCQCQLT 755
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +C+ C N+Y GCK C+C+P+GS+ CD V GQC +
Sbjct: 756 TMGLQCNSCKDNYYGLDSGGCKPCDCDPSGSLPGI-TCDQVTGQCV-----------CKA 803
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPL---GHGGSLNLQCNSEG-------------RC 184
VQ K CK D + L G + CN++G +C
Sbjct: 804 NVQGTK-----------CNECKDDYHSLLSSNGDGCMPCGCNTDGTLAGSTVCDKSTAQC 852
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSV---KNTPN---CDSVKGQCE 235
CKP V G C++C N + + GC++C C+ +G++ + +P CD GQC
Sbjct: 853 PCKPLVQGMTCNQCQGNSWGLSVSNPDGCQACNCDASGTLFGDQVSPTDLVCDQNSGQCA 912
Query: 236 CKDNVEGAQCRS 247
C EG QC S
Sbjct: 913 CLTGREGRQCNS 924
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 112/269 (41%), Gaps = 43/269 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ F + + + G C CQ G C C+DNYY C C+C+
Sbjct: 731 CNCDPFGSTSQYCDPV------SGQC-QCQLTTMGLQCNSCKDNYYGLDSGG-CKPCDCD 782
Query: 61 PIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNT 115
P GSL + C+ G+C CK V G KC+ C +++ + GC C CN G++ +
Sbjct: 783 PSGSLPGITCDQVTGQCVCKANVQGTKCNECKDDYHSLLSSNGDGCMPCGCNTDGTLAGS 842
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--------RRCKRDTYP 167
CD QC L VQ GN W L + C D
Sbjct: 843 TVCDKSTAQCPCKPL-----------VQGMTCNQCQGNS-WGLSVSNPDGCQACNCDASG 890
Query: 168 LGHGGSL---NLQCN-SEGRCQCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSV 221
G + +L C+ + G+C C G G +C+ C +Y D GC C C+P ++
Sbjct: 891 TLFGDQVSPTDLVCDQNSGQCACLTGREGRQCNSCSSGYYLPDNNGRGCLLCACHPIATL 950
Query: 222 KNTPNCDSVKGQCECKDN---VEGAQCRS 247
T C S GQC CK N V G QC +
Sbjct: 951 PGT-TCSSTGGQCVCKGNGAGVSGRQCNT 978
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 79/244 (32%), Positives = 115/244 (47%), Gaps = 36/244 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACNCNPIGSL--NLQCN-SEGRCQCK 78
G C+ C+ + G C +C+D+Y+ S + C C CN G+L + C+ S +C CK
Sbjct: 797 GQCV-CKANVQGTKCNECKDDYHSLLSSNGDGCMPCGCNTDGTLAGSTVCDKSTAQCPCK 855
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSV---KNTPN---CDSVKGQCESAQ 129
P V G C++C N + + GC++C C+ +G++ + +P CD GQC
Sbjct: 856 PLVQGMTCNQCQGNSWGLSVSNPDGCQACNCDASGTLFGDQVSPTDLVCDQNSGQCACLT 915
Query: 130 LSSRGRVHTELRVQSRKNFDPAGN-RIWDLRRCKR-DTYPLGHGGSLNLQCNSEG-RCQC 186
GR + S + P N R L C T P C+S G +C C
Sbjct: 916 ----GREGRQCNSCSSGYYLPDNNGRGCLLCACHPIATLP-------GTTCSSTGGQCVC 964
Query: 187 K---PGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
K GV+G +C+ C +Y+F +A C SC CN AGSV CD G C+CK V
Sbjct: 965 KGNGAGVSGRQCNTCLTGYYNFNDATGTCTSCNCNIAGSVGT--GCDVNSGVCQCKQYVM 1022
Query: 242 GAQC 245
G +C
Sbjct: 1023 GVKC 1026
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 61/226 (26%), Positives = 89/226 (39%), Gaps = 26/226 (11%)
Query: 42 RDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQC--KPGVTGDKCDRCDVNHYD---- 95
R NY+ CNC+ GS + +C C G C+RC + D
Sbjct: 489 RHNYFGIEEITVSARCNCHGHGSTCDMSTNPYQCDCLADSYTEGTMCERCKPLYNDKPFR 548
Query: 96 FGEA----GCKSCEC-NPAGSVKNTPNCDSVK--------GQCESAQLSSRGRVHTELRV 142
+G+ CK CEC A S + D G C + Q ++ G + +
Sbjct: 549 YGDQVNAYNCKPCECYGHATSCSYIESEDPFPNDHNRGGGGVCTNCQHNTAGNRCDQCKT 608
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
+ + + I C + + GG G+C CK VTG +CD C +
Sbjct: 609 NYYRELGKSLDAIDVCSACSCNIAGVVDGGDC---AKVGGQCNCKLYVTGRQCDTCKTGY 665
Query: 203 YDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y+ + GC SC C+PAGS+ + +C G C CK NV G C
Sbjct: 666 YNLQSSNVNGCSSCVCSPAGSI-GSGSCQQNTGDCVCKTNVIGINC 710
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/188 (30%), Positives = 80/188 (42%), Gaps = 30/188 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSL--------NLQCN-SEGRCQC 77
C+ G C +C+ N + S N C ACNC+ G+L +L C+ + G+C C
Sbjct: 854 CKPLVQGMTCNQCQGNSWGLSVSNPDGCQACNCDASGTLFGDQVSPTDLVCDQNSGQCAC 913
Query: 78 KPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC----ESAQLS 131
G G +C+ C +Y D GC C C+P ++ T C S GQC A +S
Sbjct: 914 LTGREGRQCNSCSSGYYLPDNNGRGCLLCACHPIATLPGT-TCSSTGGQCVCKGNGAGVS 972
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
R + NF+ A C + GS+ C+ + G CQCK V
Sbjct: 973 GR---QCNTCLTGYYNFNDATG---TCTSCNCNI-----AGSVGTGCDVNSGVCQCKQYV 1021
Query: 191 TGDKCDRC 198
G KCD C
Sbjct: 1022 MGVKCDTC 1029
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 23 GGHCLDCQGDR---DGPNCEKCRDNYYQ-KSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
GG C+ C+G+ G C C YY CT+CNCN GS+ C+ + G CQC
Sbjct: 959 GGQCV-CKGNGAGVSGRQCNTCLTGYYNFNDATGTCTSCNCNIAGSVGTGCDVNSGVCQC 1017
Query: 78 KPGVTGDKCDRC 89
K V G KCD C
Sbjct: 1018 KQYVMGVKCDTC 1029
>gi|74188232|dbj|BAE25787.1| unnamed protein product [Mus musculus]
Length = 790
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG CE+CR+N+++ C+ C+C+
Sbjct: 340 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCS 399
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS T C+
Sbjct: 400 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGS---TDECNV 456
Query: 121 VKGQC 125
G+C
Sbjct: 457 ETGRC 461
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 379 RCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 438
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS T C+ G+C CKDNVEG C
Sbjct: 439 GCRPCSCDPSGS---TDECNVETGRCVCKDNVEGFNC 472
>gi|402594336|gb|EJW88262.1| laminin subunit gamma-1, partial [Wuchereria bancrofti]
Length = 1649
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 84/125 (67%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ SNRC+FD+ L+ RTG GGHC+DC G+ G +CE+C +++ G+++C C CN
Sbjct: 355 CNCSHLSNRCYFDQALFERTGSGGHCIDCAGNTQGAHCEECAPFNWRRPGEHYCIPCQCN 414
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGSL +QC+ G+C CKPGV G CD C +Y F +GCK+C C+ GS+ N P CDS
Sbjct: 415 EIGSLGMQCDDHGQCPCKPGVGGHFCDHCMSGYYGFSISGCKNCLCDKTGSLNNEPVCDS 474
Query: 121 VKGQC 125
G C
Sbjct: 475 ETGSC 479
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 48/74 (64%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL +QC+ G+C CKPGV G CD C +Y F +GCK+C C+ GS+ N P CDS
Sbjct: 417 GSLGMQCDDHGQCPCKPGVGGHFCDHCMSGYYGFSISGCKNCLCDKTGSLNNEPVCDSET 476
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 477 GSCSCKLNVEGQQC 490
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C +CQ G +C++C+ Y+ + + C CNC+ +GS+N C+ G+C CK GV
Sbjct: 930 GQC-NCQPHVIGSHCDQCQPGYFNLTSGSGCQECNCDVLGSVNSTCDVLTGQCLCKAGVM 988
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +CD+C+ HY FG GC+SC+C GS +P CD + GQC
Sbjct: 989 GRRCDQCEPQHYGFGIDGCQSCDCEVIGS--ESPQCDVITGQC 1029
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS+N C+ G+C CK GV G +CD+C+ HY FG GC+SC+C GS +P CD +
Sbjct: 968 GSVNSTCDVLTGQCLCKAGVMGRRCDQCEPQHYGFGIDGCQSCDCEVIGS--ESPQCDVI 1025
Query: 231 KGQCECKDNVEGAQC 245
GQC C+D++EG +C
Sbjct: 1026 TGQCLCRDHIEGRRC 1040
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 52/216 (24%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGS-------LNLQC-N 70
G C C D G NCE+C+ Y+ + GD C ACNC G+ + L+C
Sbjct: 870 GECKKCIYDTVGFNCEECKPGYWGDALLEPKGD--CKACNCFAPGTKRSNVDYVLLECRQ 927
Query: 71 SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
S+G+C C+P V G CD+C +++ +GC+ C C+ GSV +T CD + GQC
Sbjct: 928 SDGQCNCQPHVIGSHCDQCQPGYFNLTSGSGCQECNCDVLGSVNST--CDVLTGQC---- 981
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCN 179
L G V R+ +C+ Y G G S + QC+
Sbjct: 982 LCKAG-------VMGRR-----------CDQCEPQHYGFGIDGCQSCDCEVIGSESPQCD 1023
Query: 180 S-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G+C C+ + G +CD C N Y+ +AGC C+
Sbjct: 1024 VITGQCLCRDHIEGRRCDHCIENRYNL-QAGCLPCD 1058
>gi|410931179|ref|XP_003978973.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1-like
[Takifugu rubripes]
Length = 1329
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 83/125 (66%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C + DGPNCE+C DNY+ + C C C+
Sbjct: 70 CDCNGKSGECYFDGELYRATGHGGHCRNCADNTDGPNCERCLDNYHGALDGSGCLPCGCS 129
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
+GS +LQC++ G C CKPGVTGDKCDRC + +AGC+ C C+P+GS T CD
Sbjct: 130 AVGSESLQCDNRGVCTCKPGVTGDKCDRCQPGFHSLTQAGCRPCACSPSGS---TQECDV 186
Query: 121 VKGQC 125
GQC
Sbjct: 187 TTGQC 191
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQC++ G C CKPGVTGDKCDRC + +AGC+ C C+P+GS T CD
Sbjct: 132 GSESLQCDNRGVCTCKPGVTGDKCDRCQPGFHSLTQAGCRPCACSPSGS---TQECDVTT 188
Query: 232 GQCECKDNVEGAQC 245
GQC CKDNVEG C
Sbjct: 189 GQCRCKDNVEGFNC 202
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 93/209 (44%), Gaps = 43/209 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ---CNSEGRCQ 76
G CL C + DG C++C+D +Y S + C C+C+P+G++ Q G+C
Sbjct: 567 GECLKCIHNTDGFFCDRCKDGFYGNALASSPADKCKPCSCSPLGTVGGQSTCLQVTGQCP 626
Query: 77 CKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V G C C ++ +GC C C+P GS CD + GQCE Q G
Sbjct: 627 CHPNVAGRDCGACQPGFFNLQSGSGCARCNCDPIGSTNG--QCDIITGQCE-CQPGVTG- 682
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSEGRCQ 185
LR + RC+RD + G S+ QC +GRC+
Sbjct: 683 ----LRCE----------------RCERDFFGFSSSGCKPCDCDPEGSMLGQCKEDGRCE 722
Query: 186 CKPGVTGDKCDRCDVN-HYDFGEAGCKSC 213
C+PG G +CD C+ N Y+ GC+ C
Sbjct: 723 CRPGFVGTRCDMCEENFFYNRSAPGCQQC 751
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 104/243 (42%), Gaps = 40/243 (16%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC-- 75
G + QGD G CE C D ++ Q C AC C S N N+ G C
Sbjct: 510 GTTVVQSQGD-SGKRCELCDDGFFGDPLGQSGPGRTCRACKC----SDNFDPNAVGNCDR 564
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C G CDRC Y A CK C C+P G+V C V GQ
Sbjct: 565 ETGECLKCIHNTDGFFCDRCKDGFYGNALASSPADKCKPCSCSPLGTVGGQSTCLQVTGQ 624
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EG 182
C H + + P + C R + P+G S N QC+ G
Sbjct: 625 CP---------CHPNVAGRDCGACQPGFFNLQSGSGCARCNCDPIG---STNGQCDIITG 672
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+C+C+PGVTG +C+RC+ + + F +GCK C+C+P GS+ D G+CEC+ G
Sbjct: 673 QCECQPGVTGLRCERCERDFFGFSSSGCKPCDCDPEGSMLGQCKED---GRCECRPGFVG 729
Query: 243 AQC 245
+C
Sbjct: 730 TRC 732
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 109/267 (40%), Gaps = 39/267 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C+CNG S+ C D G C DCQ + G +CE+C+D +Y + C C
Sbjct: 436 CSCNGHSDTCGPDT---------GAC-DCQDNTAGLSCERCKDGFYGDASRGTPADCQPC 485
Query: 58 NCNPIG---SLNLQCNSEGRCQCKPGVT--------GDKCDRCDVNHY--DFGEAG---- 100
C P G ++ L+ C G T G +C+ CD + G++G
Sbjct: 486 PC-PAGATCAVILRSREVVCTNCPAGTTVVQSQGDSGKRCELCDDGFFGDPLGQSGPGRT 544
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C+C+ NCD G+C ++ G + + F +
Sbjct: 545 CRACKCSDNFDPNAVGNCDRETGECLKCIHNTDGFFCD----RCKDGFYGNALASSPADK 600
Query: 161 CKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPA 218
CK PLG G + G+C C P V G C C ++ +GC C C+P
Sbjct: 601 CKPCSCSPLGTVGGQSTCLQVTGQCPCHPNVAGRDCGACQPGFFNLQSGSGCARCNCDPI 660
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS CD + GQCEC+ V G +C
Sbjct: 661 GSTNG--QCDIITGQCECQPGVTGLRC 685
>gi|391346422|ref|XP_003747473.1| PREDICTED: laminin subunit gamma-1-like [Metaseiulus occidentalis]
Length = 1654
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 84/127 (66%), Gaps = 2/127 (1%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN 58
CNCNG S C FD +LY T GG C++C+ +R G +C++C++NYY+ + C CN
Sbjct: 359 CNCNGRSETCVFDPQLYEETNGQIGGRCVNCRDNRAGVHCKECKENYYESNSTGLCVPCN 418
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 118
C+P GS N QC ++G+C CKPGV G CDRC NHYDF + GCK CECN AGS + P C
Sbjct: 419 CDPRGSSNTQCLADGKCVCKPGVGGQYCDRCLPNHYDFTDDGCKPCECNTAGSRHSPPEC 478
Query: 119 DSVKGQC 125
D V G C
Sbjct: 479 DVVTGNC 485
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 51/74 (68%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS N QC ++G+C CKPGV G CDRC NHYDF + GCK CECN AGS + P CD V
Sbjct: 423 GSSNTQCLADGKCVCKPGVGGQYCDRCLPNHYDFTDDGCKPCECNTAGSRHSPPECDVVT 482
Query: 232 GQCECKDNVEGAQC 245
G C CKDNVEG C
Sbjct: 483 GNCICKDNVEGQHC 496
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
DC + +G C++CR+ Y+ + C +C CN IGS C+ G C C+ GV KC
Sbjct: 937 DCLLNVEGLQCDRCREGYWNLASGTGCESCACNTIGSKGSMCDVVTGVCSCQSGVQEPKC 996
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
D C HY F GCK+C+C+P GS + CD GQC
Sbjct: 997 DVCQPLHYGFSAEGCKTCDCDPTGS--SDMQCDVETGQC 1033
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 94/258 (36%), Gaps = 55/258 (21%)
Query: 19 RTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP--------IGSLNLQCN 70
R + C+DC G CE C + YY A C P S+N
Sbjct: 811 RPDNTVMCMDCPAGYKGMRCEGCDEGYYGDPRGLLGPATECAPCQCNGNVDRDSINYCNT 870
Query: 71 SEGRC-QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECN------PAGSVKNTPNCD 119
+ G+C +C GD C+ C + A CKSC C+ P S C+
Sbjct: 871 TNGKCTKCIYNTAGDHCEVCKAGFFGNALAEKKGDCKSCNCHVDGTRKPLNSTSKVLECE 930
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
G+C+ L+ G RC+ + L G
Sbjct: 931 MTTGKCDCL-LNVEG---------------------LQCDRCREGYWNLASGTGCESCAC 968
Query: 172 ---GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
GS C+ G C C+ GV KCD C HY F GCK+C+C+P GS + C
Sbjct: 969 NTIGSKGSMCDVVTGVCSCQSGVQEPKCDVCQPLHYGFSAEGCKTCDCDPTGS--SDMQC 1026
Query: 228 DSVKGQCECKDNVEGAQC 245
D GQC C+ N G C
Sbjct: 1027 DVETGQCTCRPNFVGRTC 1044
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 98/210 (46%), Gaps = 39/210 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCN------PIGSLN--LQCN 70
G C C + G +CE C+ ++ +K GD C +CNC+ P+ S + L+C
Sbjct: 873 GKCTKCIYNTAGDHCEVCKAGFFGNALAEKKGD--CKSCNCHVDGTRKPLNSTSKVLECE 930
Query: 71 -SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKG--QCE 126
+ G+C C V G +CDRC +++ GC+SC CN GS + CD V G C+
Sbjct: 931 MTTGKCDCLLNVEGLQCDRCREGYWNLASGTGCESCACNTIGSKGSM--CDVVTGVCSCQ 988
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRC 184
S + V L F G CK D P GS ++QC+ E G+C
Sbjct: 989 SGVQEPKCDVCQPLHY----GFSAEG--------CKTCDCDP---TGSSDMQCDVETGQC 1033
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
C+P G C++C N + +A CK+C+
Sbjct: 1034 TCRPNFVGRTCNKCVRNTF-LEQATCKACD 1062
>gi|126370|sp|P02468.2|LAMC1_MOUSE RecName: Full=Laminin subunit gamma-1; AltName: Full=Laminin B2
chain; AltName: Full=Laminin-1 subunit gamma; AltName:
Full=Laminin-10 subunit gamma; AltName: Full=Laminin-11
subunit gamma; AltName: Full=Laminin-2 subunit gamma;
AltName: Full=Laminin-3 subunit gamma; AltName:
Full=Laminin-4 subunit gamma; AltName: Full=Laminin-6
subunit gamma; AltName: Full=Laminin-7 subunit gamma;
AltName: Full=Laminin-8 subunit gamma; AltName:
Full=Laminin-9 subunit gamma; AltName: Full=S-laminin
subunit gamma; Short=S-LAM gamma; Flags: Precursor
gi|293688|gb|AAA39405.1| laminin B2 [Mus musculus]
Length = 1607
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG CE+CR+N+++ C+ C+C+
Sbjct: 340 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCS 399
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+ GS T C+
Sbjct: 400 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDLRGS---TDECNV 456
Query: 121 VKGQC 125
G+C
Sbjct: 457 ETGRC 461
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C++ ++ + + C AC CNP G++ Q CN G+CQ
Sbjct: 845 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQ 904
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V+G C CD +Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 905 CLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 961
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D H GSL+LQC +GRC+C+ G G++C
Sbjct: 962 -HCERCETNHFGFGPEGCKPCDCH----------HEGSLSLQCKDDGRCECREGFVGNRC 1010
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 1011 DQCEENYFYNRSWPGCQEC 1029
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 790 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND----NIDPNAVGNCNRLTG 845
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+V+ +C+ V GQC+
Sbjct: 846 ECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQC 905
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 906 LP-----------HVSGRDCGTCDPGYYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 951
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+ NH+ FG GCK C+C+ GS+ D G+CEC++ G
Sbjct: 952 CECQPGITGQHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDD---GRCECREGFVGN 1008
Query: 244 QC 245
+C
Sbjct: 1009 RC 1010
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 56/97 (57%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 379 RCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 438
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+ GS T C+ G+C CKDNVEG C
Sbjct: 439 GCRPCSCDLRGS---TDECNVETGRCVCKDNVEGFNC 472
>gi|224073548|ref|XP_002195417.1| PREDICTED: laminin subunit gamma-3 [Taeniopygia guttata]
Length = 1546
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S CF+D+EL+ RTGHGGHCL+C+ + GP+CE CR NYY+ C C+C+
Sbjct: 325 CNCSGRSEECFYDRELFRRTGHGGHCLNCRDNTAGPHCESCRQNYYRWEPQGTCQPCHCH 384
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL QC++ G C CK VTG KC+RC ++ E GC+ C C+PAGSV CD
Sbjct: 385 PAGSLQPQCDNSGTCVCKANVTGWKCERCKDGYHSLSEGGCRPCSCDPAGSVG---TCDP 441
Query: 121 VKGQC 125
G C
Sbjct: 442 TTGHC 446
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 88/189 (46%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G +CE+CR +Y S C C+CNP GS C+ G+C
Sbjct: 801 GRCLRCLYNTMGDHCERCRPGFYGDALAPSPAGKCAPCDCNPSGSDPRMEGCDPGTGQCH 860
Query: 77 CKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C +C +Y GCKSCEC+P GS ++ C + GQC S Q G+
Sbjct: 861 CLPHVTGRACGQCQPGYYGLEPTVGCKSCECHPTGSRES--GCHVLTGQC-SCQPGVTGK 917
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
+ + G + R C+ + PLG S+ QC+ C C PG G K
Sbjct: 918 KCDQCQ---------HGFFGFSARGCRACNCSPLG---SITPQCHENSTCLCHPGFVGYK 965
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 966 CDRCQANFF 974
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL QC++ G C CK VTG KC+RC ++ E GC+ C C+PAGSV CD
Sbjct: 386 AGSLQPQCDNSGTCVCKANVTGWKCERCKDGYHSLSEGGCRPCSCDPAGSVG---TCDPT 442
Query: 231 KGQCECKDNVEGAQC 245
G C CK+ VEG C
Sbjct: 443 TGHCTCKERVEGHSC 457
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 97/238 (40%), Gaps = 35/238 (14%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-Q 76
C C + G CE C D ++ Q+ + C C C+ LN N GRC +
Sbjct: 746 CTHCPPGQRGKRCELCDDGFFGDPLGQRGPVHPCEPCQCHGNVDLNAVGNCDPVSGRCLR 805
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C GD C+RC Y A C C+CNP+GS CD GQC
Sbjct: 806 CLYNTMGDHCERCRPGFYGDALAPSPAGKCAPCDCNPSGSDPRMEGCDPGTGQC------ 859
Query: 132 SRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCK 187
H V R P + CK + +P G S C+ G+C C+
Sbjct: 860 -----HCLPHVTGRACGQCQPGYYGLEPTVGCKSCECHPTG---SRESGCHVLTGQCSCQ 911
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
PGVTG KCD+C + F GC++C C+P GS+ TP C C C G +C
Sbjct: 912 PGVTGKKCDQCQHGFFGFSARGCRACNCSPLGSI--TPQCHE-NSTCLCHPGFVGYKC 966
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 87/249 (34%), Gaps = 62/249 (24%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNPA 109
C C CN G + G CQC G C+RC Y +G CK C C
Sbjct: 676 CVPCTCNQHGDCH---PLTGHCQCLHNTEGPFCERCSPGFYGNPFSGRSDDCKPCPCPGR 732
Query: 110 GSVKNTPNCDSVK-GQCESAQ----------------LSSRGRVHT--------ELRVQS 144
P+ V C Q L RG VH + + +
Sbjct: 733 SPCTEVPSTGEVVCTHCPPGQRGKRCELCDDGFFGDPLGQRGPVHPCEPCQCHGNVDLNA 792
Query: 145 RKNFDPAGNR----IWDL-----RRCKRDTY-----PLGHGGSLNLQCNSE--------- 181
N DP R +++ RC+ Y P G CN
Sbjct: 793 VGNCDPVSGRCLRCLYNTMGDHCERCRPGFYGDALAPSPAGKCAPCDCNPSGSDPRMEGC 852
Query: 182 ----GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C P VTG C +C +Y GCKSCEC+P GS ++ C + GQC C
Sbjct: 853 DPGTGQCHCLPHVTGRACGQCQPGYYGLEPTVGCKSCECHPTGSRES--GCHVLTGQCSC 910
Query: 237 KDNVEGAQC 245
+ V G +C
Sbjct: 911 QPGVTGKKC 919
>gi|449266455|gb|EMC77508.1| Laminin subunit gamma-1, partial [Columba livia]
Length = 997
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC C G+ G +CE+CRD++Y+ + C C+CN
Sbjct: 275 CDCNGRSQECYFDPELYRSTGHGGHCSGCSGNTAGAHCERCRDSFYRLGSEEECLPCSCN 334
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S G+C CKPGV G+KCDRC + EAGC+ C C+ AGS T C+
Sbjct: 335 PVGSLSTQCDSYGQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCDLAGS---TGECNV 391
Query: 121 VKGQC 125
G+C
Sbjct: 392 ETGRC 396
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC+S G+C CKPGV G+KCDRC + EAGC+ C C+ AGS T C+
Sbjct: 337 GSLSTQCDSYGQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCDLAGS---TGECNVET 393
Query: 232 GQCECKDNVEGAQC 245
G+C CKDNVEG C
Sbjct: 394 GRCACKDNVEGFHC 407
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 19/147 (12%)
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
++C CNP G+V +C+ V GQCE + ++ R E P + R
Sbjct: 789 RACRCNPYGTVNQQTSCNQVTGQCECLSHVTGRDCSACE----------PGFFNLQSGRG 838
Query: 161 CKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
C+R + + LG S N QC+ + G+C+C+PGV G +CDRC+VNH+ F GCK C+C+P
Sbjct: 839 CERCNCHALG---STNGQCDIQTGQCECQPGVAGQRCDRCEVNHFGFSSEGCKPCDCDPE 895
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS + C G+CECK+ G++C
Sbjct: 896 GS--RSLQCQE-NGRCECKEGFVGSRC 919
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C G +C C ++ C CNC+ +GS N QC+ + G+C+C+PGV G +C
Sbjct: 813 ECLSHVTGRDCSACEPGFFNLQSGRGCERCNCHALGSTNGQCDIQTGQCECQPGVAGQRC 872
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGS 111
DRC+VNH+ F GCK C+C+P GS
Sbjct: 873 DRCEVNHFGFSSEGCKPCDCDPEGS 897
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 78/171 (45%), Gaps = 35/171 (20%)
Query: 56 ACNCNPIGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGS 111
AC CNP G++N Q CN G+C+C VTG C C+ ++ GC+ C C+ GS
Sbjct: 790 ACRCNPYGTVNQQTSCNQVTGQCECLSHVTGRDCSACEPGFFNLQSGRGCERCNCHALGS 849
Query: 112 VKNTPNCDSVKGQCE-----SAQLSSRGRV-HTELRVQSRK--NFDPAGNRIWDLRRCKR 163
CD GQCE + Q R V H + K + DP G+R
Sbjct: 850 TNG--QCDIQTGQCECQPGVAGQRCDRCEVNHFGFSSEGCKPCDCDPEGSR--------- 898
Query: 164 DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH-YDFGEAGCKSC 213
+LQC GRC+CK G G +CD+C+ N+ Y+ GC+ C
Sbjct: 899 -----------SLQCQENGRCECKEGFVGSRCDQCEENYFYNRSWPGCQEC 938
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G C++C N++ S + C C+C+P GS +LQC GRC+CK G G +CD
Sbjct: 862 ECQPGVAGQRCDRCEVNHFGFSSEG-CKPCDCDPEGSRSLQCQENGRCECKEGFVGSRCD 920
Query: 88 RCDVNH-YDFGEAGCKSC 104
+C+ N+ Y+ GC+ C
Sbjct: 921 QCEENYFYNRSWPGCQEC 938
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 101/254 (39%), Gaps = 43/254 (16%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTG 83
C +G CE+C + +++ + C C CN + C E G C C+ G
Sbjct: 625 CPAGYEGQFCERCSSGFRRETPSLGPYSPCVPCACN---GHSETCEPETGVCNCRDNTAG 681
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHT 138
C++C +Y AG C+ C C S P V C++ + +
Sbjct: 682 SHCEKCSDGYYGDATAGTASDCQPCPCPGGSSCAVVPRTKEVVCTSCQAGTTVIKQNLLF 741
Query: 139 ELRVQSRKNFD--------------PAGNRIWDLRRCKR-DTYPLGHG--------GSLN 175
L+ +RK +D A +++ + +C + PL G++N
Sbjct: 742 CLQT-ARKPWDGWQSSCFPTDFMLGVAESKVQNTCKCLKCLKKPLAKHRACRCNPYGTVN 800
Query: 176 LQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVK 231
Q CN G+C+C VTG C C+ ++ GC+ C C+ GS CD
Sbjct: 801 QQTSCNQVTGQCECLSHVTGRDCSACEPGFFNLQSGRGCERCNCHALGSTNG--QCDIQT 858
Query: 232 GQCECKDNVEGAQC 245
GQCEC+ V G +C
Sbjct: 859 GQCECQPGVAGQRC 872
>gi|345306108|ref|XP_003428422.1| PREDICTED: laminin subunit gamma-3 [Ornithorhynchus anatinus]
Length = 1328
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S CF+D+EL+ TGHGGHC +C+ GP+CE+C++N+Y+ C C+C+
Sbjct: 329 CNCSGHSEECFYDRELFRSTGHGGHCRNCRAHTAGPHCERCQENFYRWDPQKPCQPCDCH 388
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC++ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 389 PAGSLLLQCDNSGTCVCKPSVTGWKCDRCLAGFHSLSEGGCRPCTCNPAGSLG---PCDP 445
Query: 121 VKGQC 125
G+C
Sbjct: 446 HNGRC 450
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 93/189 (49%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNFCTACNCNPIGSLNLQCN---SEGRC 75
G CL C + GP+CE+CR+ +Y + G N CTAC+CN +GS Q G+C
Sbjct: 817 GRCLRCLHNTSGPHCERCREGFYGSALSPAPGGN-CTACSCNQVGSARDQGECDPVSGQC 875
Query: 76 QCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VTG C C YD E GCKSCEC+P GS K +C V GQC G
Sbjct: 876 SCLPHVTGRDCSSCSPGFYDLRAEKGCKSCECHPVGSKKK--HCHPVTGQCPCLP----G 929
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
T Q R F G R C + PL GS+ QC+ G C CKPG G K
Sbjct: 930 ITGTACG-QCRPGF--FGFSAKGCRAC--NCSPL---GSITPQCHENGTCVCKPGFVGYK 981
Query: 195 CDRCDVNHY 203
C+RC VN +
Sbjct: 982 CERCQVNFF 990
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL LQC++ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 390 AGSLLLQCDNSGTCVCKPSVTGWKCDRCLAGFHSLSEGGCRPCTCNPAGSLG---PCDPH 446
Query: 231 KGQCECKDNVEGAQCRS 247
G+C CK+NVEG C S
Sbjct: 447 NGRCPCKENVEGHLCDS 463
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 102/243 (41%), Gaps = 45/243 (18%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQ----KSGDNF-CTACNCNPIGSLNLQCNSEGRCQ---- 76
C C ++ G CE C D ++ +SG C C C S N+ N+ G C+
Sbjct: 762 CTHCPQNQRGRRCELCDDGFFGDPLGRSGPPIPCRPCQC----SGNVDPNAVGNCEPLSG 817
Query: 77 ----CKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
C +G C+RC Y + C +C CN GS ++ CD V GQC
Sbjct: 818 RCLRCLHNTSGPHCERCREGFYGSALSPAPGGNCTACSCNQVGSARDQGECDPVSGQCSC 877
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR---CKR-DTYPLGHGGSLNLQCNS-EG 182
L + ++ +DLR CK + +P+G S C+ G
Sbjct: 878 ------------LPHVTGRDCSSCSPGFYDLRAEKGCKSCECHPVG---SKKKHCHPVTG 922
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+C C PG+TG C +C + F GC++C C+P GS+ TP C G C CK G
Sbjct: 923 QCPCLPGITGTACGQCRPGFFGFSAKGCRACNCSPLGSI--TPQCHE-NGTCVCKPGFVG 979
Query: 243 AQC 245
+C
Sbjct: 980 YKC 982
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 95/251 (37%), Gaps = 61/251 (24%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGRC---QCKP 79
CQ +GP+CE+C +Y G+ F C C C P S+ + G C
Sbjct: 712 CQHHTEGPSCERCVAGFY---GNPFGGHPDDCKPCPC-PGPSMCMAIPESGEVVCTHCPQ 767
Query: 80 GVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G +C+ CD + G +G C+ C+C+ NC+ + G+C ++
Sbjct: 768 NQRGRRCELCDDGFFGDPLGRSGPPIPCRPCQCSGNVDPNAVGNCEPLSGRCLRCLHNTS 827
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-----PLGHGGSLNLQCNS-------- 180
G H E RC+ Y P G CN
Sbjct: 828 G-PHCE--------------------RCREGFYGSALSPAPGGNCTACSCNQVGSARDQG 866
Query: 181 -----EGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
G+C C P VTG C C YD E GCKSCEC+P GS K +C V GQC
Sbjct: 867 ECDPVSGQCSCLPHVTGRDCSSCSPGFYDLRAEKGCKSCECHPVGSKKK--HCHPVTGQC 924
Query: 235 ECKDNVEGAQC 245
C + G C
Sbjct: 925 PCLPGITGTAC 935
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 90/250 (36%), Gaps = 67/250 (26%)
Query: 35 GPNCEKCRDNYYQK--SGDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE C Y ++ SG + C C CN GS C+ E G CQC+ G C+RC
Sbjct: 669 GQFCESCSPGYKREIPSGGPYASCIPCTCNQHGS----CDPESGICQCQHHTEGPSCERC 724
Query: 90 DVNHY--DFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
Y FG CK C C P V C + RGR
Sbjct: 725 VAGFYGNPFGGHPDDCKPCPCPGPSMCMAIPESGEVV--CTHCPQNQRGR---------- 772
Query: 146 KNFDPAGNRIWDLRRCKR--DTY---PLGHGG----------SLNLQCNSEGRCQ----- 185
RC+ D + PLG G S N+ N+ G C+
Sbjct: 773 --------------RCELCDDGFFGDPLGRSGPPIPCRPCQCSGNVDPNAVGNCEPLSGR 818
Query: 186 ---CKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECK 237
C +G C+RC Y + C +C CN GS ++ CD V GQC C
Sbjct: 819 CLRCLHNTSGPHCERCREGFYGSALSPAPGGNCTACSCNQVGSARDQGECDPVSGQCSCL 878
Query: 238 DNVEGAQCRS 247
+V G C S
Sbjct: 879 PHVTGRDCSS 888
>gi|47228397|emb|CAG05217.1| unnamed protein product [Tetraodon nigroviridis]
Length = 949
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 83/112 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S++C FD E Y TG GG CL C+ + DGP+CE+CR+N+Y+ S D C CNCN
Sbjct: 329 CNCSGRSDQCVFDAEQYRSTGSGGRCLSCRDNADGPHCERCRENHYRSSIDEPCLPCNCN 388
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
GS++LQC++EGRC C+ GVTG+KCD+C + G AGC+ CEC+P+GSV
Sbjct: 389 INGSVSLQCDAEGRCPCRAGVTGEKCDKCGPGFHSLGPAGCRPCECDPSGSV 440
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS++LQC++EGRC C+ GVTG+KCD+C + G AGC+ CEC+P+GSV +C
Sbjct: 391 GSVSLQCDAEGRCPCRAGVTGEKCDKCGPGFHSLGPAGCRPCECDPSGSVG---DCSPSD 447
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG C
Sbjct: 448 GGCHCKANVEGQSC 461
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 79/153 (51%), Gaps = 18/153 (11%)
Query: 55 TACNCNPIGS---LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAG 110
TAC+CNP+G+ +N G C+C VTG C C+V ++ GC+ C+CNP G
Sbjct: 790 TACSCNPVGTSGDVNECHPQTGHCRCLSHVTGRDCGSCEVGFFNLQPGVGCERCQCNPIG 849
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
S ++ C V GQC R V L R F +R R C D P+
Sbjct: 850 S--SSLACHPVTGQC-----VCRAGVEGRLCDSCRMGFFGFSSR--GCRACNCD--PM-- 896
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
GSL++QC++ G C+C+ G G CD+C++N++
Sbjct: 897 -GSLSMQCHNNGTCRCRQGFVGYNCDKCELNYF 928
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C G +C C ++ C C CNPIGS +L C+ G+C C+ GV
Sbjct: 811 GHC-RCLSHVTGRDCGSCEVGFFNLQPGVGCERCQCNPIGSSSLACHPVTGQCVCRAGVE 869
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
G CD C + + F GC++C C+P GS+
Sbjct: 870 GRLCDSCRMGFFGFSSRGCRACNCDPMGSLS 900
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ +G C+ CR ++ S C ACNC+P+GSL++QC++ G C+C+ G G
Sbjct: 860 GQCV-CRAGVEGRLCDSCRMGFFGFSSRG-CRACNCDPMGSLSMQCHNNGTCRCRQGFVG 917
Query: 84 DKCDRCDVNHY 94
CD+C++N++
Sbjct: 918 YNCDKCELNYF 928
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
P+G G +N G C+C VTG C C+V ++ GC+ C+CNP GS ++
Sbjct: 796 PVGTSGDVNECHPQTGHCRCLSHVTGRDCGSCEVGFFNLQPGVGCERCQCNPIGS--SSL 853
Query: 226 NCDSVKGQCECKDNVEGAQCRS 247
C V GQC C+ VEG C S
Sbjct: 854 ACHPVTGQCVCRAGVEGRLCDS 875
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS +L C+ G+C C+ GV G CD C + + F GC++C C+P GS+ C +
Sbjct: 849 GSSSLACHPVTGQCVCRAGVEGRLCDSCRMGFFGFSSRGCRACNCDPMGSLSM--QCHN- 905
Query: 231 KGQCECKDNVEGAQC 245
G C C+ G C
Sbjct: 906 NGTCRCRQGFVGYNC 920
>gi|126297894|ref|XP_001369858.1| PREDICTED: laminin subunit gamma-3 [Monodelphis domestica]
Length = 1585
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S CF+D ELY TGHGGHC +C+ GP+CE C++N+Y+ C C+C+
Sbjct: 329 CNCSGLSEECFYDWELYRSTGHGGHCQNCRDHTSGPHCEHCQENFYRWDQKQPCQPCDCH 388
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC++ G C+CKP VTG KCDRC + E GC+ C CN AGS+ CDS
Sbjct: 389 PAGSLSLQCDNSGTCECKPSVTGWKCDRCLPGFHSLNEGGCRPCTCNVAGSLG---TCDS 445
Query: 121 VKGQC 125
G+C
Sbjct: 446 RNGRC 450
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 92/188 (48%), Gaps = 22/188 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQ--CNSE-GRCQ 76
GHCL C + G +CE+C++ +Y + + CT C+C+P GS Q C+ + G+C
Sbjct: 838 GHCLRCLHNTTGAHCEQCQEGFYGSALAPHPADKCTPCSCDPKGSARDQGACDPQTGQCS 897
Query: 77 CKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C C YD E GC+SC+C+P GS +N C GQC L G
Sbjct: 898 CLPHVTGRDCSHCSPGFYDLQPERGCQSCKCHPVGSQEN--QCHPETGQCPC--LPGVGG 953
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
V + + NF G R C + PLG S+ QC+ C CKPG G KC
Sbjct: 954 VAC---TRCQPNF--FGFSAKGCRAC--NCSPLG---SVTTQCHENSTCICKPGFVGYKC 1003
Query: 196 DRCDVNHY 203
D C N +
Sbjct: 1004 DHCKENFF 1011
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC++ G C+CKP VTG KCDRC + E GC+ C CN AGS+ CDS
Sbjct: 390 AGSLSLQCDNSGTCECKPSVTGWKCDRCLPGFHSLNEGGCRPCTCNVAGSLG---TCDSR 446
Query: 231 KGQCECKDNVEGAQC 245
G+C CK VEG C
Sbjct: 447 NGRCPCKSKVEGYLC 461
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 97/244 (39%), Gaps = 47/244 (19%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C CN N+ N+ G C
Sbjct: 783 CTHCPKGQRGRLCEMCDDGFF---GDPLGTSGPPQPCQRCQCNE----NVDPNAVGNCDP 835
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C++C Y A C C C+P GS ++ CD GQ
Sbjct: 836 TTGHCLRCLHNTTGAHCEQCQEGFYGSALAPHPADKCTPCSCDPKGSARDQGACDPQTGQ 895
Query: 125 CE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE- 181
C ++ R H P + R C+ +P+G S QC+ E
Sbjct: 896 CSCLPHVTGRDCSHC----------SPGFYDLQPERGCQSCKCHPVG---SQENQCHPET 942
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C PGV G C RC N + F GC++C C+P GSV T C C CK
Sbjct: 943 GQCPCLPGVGGVACTRCQPNFFGFSAKGCRACNCSPLGSV--TTQCHE-NSTCICKPGFV 999
Query: 242 GAQC 245
G +C
Sbjct: 1000 GYKC 1003
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 95/245 (38%), Gaps = 63/245 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNYYQK-------SGDN 52
C CNG S+ C ++ GG + CQ + GP+CEKC Y + N
Sbjct: 273 CKCNGHSSECVLNE--------GGQLVCSCQHNTTGPDCEKCLPFYQDRPWARGTAEAAN 324
Query: 53 FCTACNCNPIGS-------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA-GCKS 103
C CNC+ + L G CQ C+ +G C+ C N Y + + C+
Sbjct: 325 ECLPCNCSGLSEECFYDWELYRSTGHGGHCQNCRDHTSGPHCEHCQENFYRWDQKQPCQP 384
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+C+PAGS+ + CD+ G CE + S G W RC
Sbjct: 385 CDCHPAGSL--SLQCDN-SGTCE-CKPSVTG---------------------WKCDRCLP 419
Query: 164 DTYPLGHGGSLNLQCNSEG----------RCQCKPGVTGDKCDRCDVNHYDF---GEAGC 210
+ L GG CN G RC CK V G CDRC ++ +GC
Sbjct: 420 GFHSLNEGGCRPCTCNVAGSLGTCDSRNGRCPCKSKVEGYLCDRCQPGTFNLKPQNPSGC 479
Query: 211 KSCEC 215
SC C
Sbjct: 480 TSCFC 484
>gi|410903774|ref|XP_003965368.1| PREDICTED: laminin subunit gamma-3-like [Takifugu rubripes]
Length = 1372
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 81/112 (72%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S++C FD E Y TG GG CL C+ DGP+CE+CR+N+Y+ S + C C CN
Sbjct: 303 CNCSGRSDQCVFDAEQYRSTGSGGRCLSCRDLTDGPHCERCRENHYRTSAEEPCLPCICN 362
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
GS++LQC++EG+C C+ GVTG+KCD+C + G AGC+ CEC+P+GSV
Sbjct: 363 INGSVSLQCDAEGKCACRTGVTGEKCDKCAAGFHSLGPAGCRPCECDPSGSV 414
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS++LQC++EG+C C+ GVTG+KCD+C + G AGC+ CEC+P+GSV +C
Sbjct: 365 GSVSLQCDAEGKCACRTGVTGEKCDKCAAGFHSLGPAGCRPCECDPSGSVG---DCSPSD 421
Query: 232 GQCECKDNVEGAQC 245
G C+CK NVEG C
Sbjct: 422 GGCDCKANVEGQSC 435
>gi|390342743|ref|XP_785198.3| PREDICTED: laminin subunit gamma-1-like [Strongylocentrotus
purpuratus]
Length = 418
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 76/102 (74%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN ++RCFFD+ELYNRTG GGHC++C+ D G +CE CRDNY++ S D C CNC+
Sbjct: 316 CNCNSHADRCFFDEELYNRTGSGGHCMECRNDTSGVSCEHCRDNYFRTSPDARCQPCNCD 375
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 102
GSLN QC+S GRCQCK GV G C++C N YDFGE GC+
Sbjct: 376 QTGSLNQQCDSSGRCQCKVGVGGKGCNQCLPNFYDFGEDGCR 417
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 30/40 (75%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
GSLN QC+S GRCQCK GV G C++C N YDFGE GC+
Sbjct: 378 GSLNQQCDSSGRCQCKVGVGGKGCNQCLPNFYDFGEDGCR 417
>gi|148676571|gb|EDL08518.1| laminin gamma 3, isoform CRA_a [Mus musculus]
Length = 1592
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+ELY TGHGGHC C+ GP+CE+C NYY+ S C C+C+
Sbjct: 336 CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDCH 395
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 396 PAGSLSLQCDNSGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCACNVAGSLG---TCDP 452
Query: 121 VKGQC 125
G C
Sbjct: 453 RSGNC 457
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQ-CNS-EGRC 75
H GHCL C + G +CE CR+ +Y + + C C+C+ GS++ + CN G+C
Sbjct: 839 HSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEKTCNPVTGQC 898
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V+G C RC YD GC+SC+C+P GS++N C GQC
Sbjct: 899 VCLPYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPC------- 949
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R + R G I R C+ PLG S QC+ C C+PG G K
Sbjct: 950 RPGVTGQACDRCQLGFFGFSIKGCRDCR--CSPLGAASS---QCHENSTCVCRPGFVGYK 1004
Query: 195 CDRCDVNHYDF-GEAGCKSC 213
CDRC N + G+ GC+ C
Sbjct: 1005 CDRCQDNFFLADGDTGCQEC 1024
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 397 AGSLSLQCDNSGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCACNVAGSLG---TCDPR 453
Query: 231 KGQCECKDNVEGAQC 245
G C CK+NVEG+ C
Sbjct: 454 SGNCPCKENVEGSLC 468
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 87/231 (37%), Gaps = 63/231 (27%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 786 CTHCPPGQRGRRCESCEDGFF---GDPLGLSGAPQPCRRCQC----SGNVDLNAVGNCDP 838
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C+ C Y A C C C+ GSV C+ V GQ
Sbjct: 839 HSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEK-TCNPVTGQ 897
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GS 173
C S GR D RC Y L G GS
Sbjct: 898 CVCLPYVS-GR---------------------DCSRCSPGFYDLQSGRGCQSCKCHPLGS 935
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
L +C+ + G+C C+PGVTG CDRC + + F GC+ C C+P G+ +
Sbjct: 936 LENKCHPKTGQCPCRPGVTGQACDRCQLGFFGFSIKGCRDCRCSPLGAASS 986
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGRC-- 75
G CL C +GP+CE+C +Y G+ F C C C P S G
Sbjct: 732 GICL-CGHHTEGPSCERCMPGFY---GNAFSGRADDCQPCPC-PGQSACATIPESGDVVC 786
Query: 76 -QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
C PG G +C+ C+ + G +G C+ C+C+ + NCD G C
Sbjct: 787 THCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVGNCDPHSGHCLRC 846
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
++ G H E R+ F + + +C + L G CN G+C C
Sbjct: 847 LYNTTG-AHCE---HCREGFYGSAVATRPVDKCAPCSCDL-RGSVSEKTCNPVTGQCVCL 901
Query: 188 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P V+G C RC YD GC+SC+C+P GS++N C GQC C+ V G C
Sbjct: 902 PYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPCRPGVTGQAC 958
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 182 GRCQ-CKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G CQ C+ TG C+RC+ N+Y + + C+ C+C+PAGS+ + CD+ G C CK
Sbjct: 359 GHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDCHPAGSL--SLQCDN-SGVCPCKPT 415
Query: 240 VEGAQC 245
V G +C
Sbjct: 416 VTGWKC 421
>gi|6453719|gb|AAF08983.1|AF083372_1 laminin 12 gamma 3 chain [Mus musculus]
Length = 1581
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+ELY TGHGGHC C+ GP+CE+C NYY+ S C C+C+
Sbjct: 336 CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDCH 395
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 396 PAGSLSLQCDNSGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCACNVAGSLG---TCDP 452
Query: 121 VKGQC 125
G C
Sbjct: 453 RSGNC 457
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQ-CNS-EGRC 75
H GHCL C + G +CE CR+ +Y + + C C+C+ GS++ + CN G+C
Sbjct: 839 HSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEKTCNPVTGQC 898
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V+G C RC YD GC+SC+C+P GS++N C GQC
Sbjct: 899 VCLPYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPC------- 949
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R + R G I R C+ PLG S QC+ C C+PG G K
Sbjct: 950 RPGVTGQACDRCQLGFFGFSIKGCRDCR--CSPLGAASS---QCHENSTCVCRPGFVGYK 1004
Query: 195 CDRCDVNHYDF-GEAGCKSC 213
CDRC N + G+ GC+ C
Sbjct: 1005 CDRCQDNFFLADGDTGCQEC 1024
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 397 AGSLSLQCDNSGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCACNVAGSLG---TCDPR 453
Query: 231 KGQCECKDNVEGAQC 245
G C CK+NVEG+ C
Sbjct: 454 SGNCPCKENVEGSLC 468
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 96/253 (37%), Gaps = 66/253 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 786 CTHCPPGQRGRRCESCEDGFF---GDPLGLSGAPQPCRRCQC----SGNVDLNAVGNCDP 838
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C+ C Y A C C C+ GSV C+ V GQ
Sbjct: 839 HSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEK-TCNPVTGQ 897
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GS 173
C S GR D RC Y L G GS
Sbjct: 898 CVCLPYVS-GR---------------------DCSRCSPGFYDLQSGRGCQSCKCHPLGS 935
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
L +C+ + G+C C+PGVTG CDRC + + F GC+ C C+P G+ + + +S
Sbjct: 936 LENKCHPKTGQCPCRPGVTGQACDRCQLGFFGFSIKGCRDCRCSPLGAASSQCHENST-- 993
Query: 233 QCECKDNVEGAQC 245
C C+ G +C
Sbjct: 994 -CVCRPGFVGYKC 1005
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGRC-- 75
G CL C +GP+CE+C +Y G+ F C C C P S G
Sbjct: 732 GICL-CGHHTEGPSCERCMPGFY---GNAFSGRADDCQPCPC-PGQSACATIPESGDVVC 786
Query: 76 -QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
C PG G +C+ C+ + G +G C+ C+C+ + NCD G C
Sbjct: 787 THCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVGNCDPHSGHCLRC 846
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
++ G H E R+ F + + +C + L G CN G+C C
Sbjct: 847 LYNTTG-AHCE---HCREGFYGSAVATRPVDKCAPCSCDL-RGSVSEKTCNPVTGQCVCL 901
Query: 188 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P V+G C RC YD GC+SC+C+P GS++N C GQC C+ V G C
Sbjct: 902 PYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPCRPGVTGQAC 958
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 182 GRCQ-CKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G CQ C+ TG C+RC+ N+Y + + C+ C+C+PAGS+ + CD+ G C CK
Sbjct: 359 GHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDCHPAGSL--SLQCDN-SGVCPCKPT 415
Query: 240 VEGAQC 245
V G +C
Sbjct: 416 VTGWKC 421
>gi|66392579|ref|NP_035966.2| laminin subunit gamma-3 precursor [Mus musculus]
gi|341940892|sp|Q9R0B6.2|LAMC3_MOUSE RecName: Full=Laminin subunit gamma-3; AltName: Full=Laminin-12
subunit gamma; AltName: Full=Laminin-14 subunit gamma;
AltName: Full=Laminin-15 subunit gamma; Flags: Precursor
gi|66272331|gb|AAH96366.1| Laminin gamma 3 [Mus musculus]
gi|148676572|gb|EDL08519.1| laminin gamma 3, isoform CRA_b [Mus musculus]
Length = 1581
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+ELY TGHGGHC C+ GP+CE+C NYY+ S C C+C+
Sbjct: 336 CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDCH 395
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 396 PAGSLSLQCDNSGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCACNVAGSLG---TCDP 452
Query: 121 VKGQC 125
G C
Sbjct: 453 RSGNC 457
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQ-CNS-EGRC 75
H GHCL C + G +CE CR+ +Y + + C C+C+ GS++ + CN G+C
Sbjct: 839 HSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEKTCNPVTGQC 898
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V+G C RC YD GC+SC+C+P GS++N C GQC
Sbjct: 899 VCLPYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPC------- 949
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R + R G I R C+ PLG S QC+ C C+PG G K
Sbjct: 950 RPGVTGQACDRCQLGFFGFSIKGCRDCR--CSPLGAASS---QCHENSTCVCRPGFVGYK 1004
Query: 195 CDRCDVNHYDF-GEAGCKSC 213
CDRC N + G+ GC+ C
Sbjct: 1005 CDRCQDNFFLADGDTGCQEC 1024
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 397 AGSLSLQCDNSGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCACNVAGSLG---TCDPR 453
Query: 231 KGQCECKDNVEGAQC 245
G C CK+NVEG+ C
Sbjct: 454 SGNCPCKENVEGSLC 468
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 96/253 (37%), Gaps = 66/253 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 786 CTHCPPGQRGRRCESCEDGFF---GDPLGLSGAPQPCRRCQC----SGNVDLNAVGNCDP 838
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C+ C Y A C C C+ GSV C+ V GQ
Sbjct: 839 HSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEK-TCNPVTGQ 897
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GS 173
C S GR D RC Y L G GS
Sbjct: 898 CVCLPYVS-GR---------------------DCSRCSPGFYDLQSGRGCQSCKCHPLGS 935
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
L +C+ + G+C C+PGVTG CDRC + + F GC+ C C+P G+ + + +S
Sbjct: 936 LENKCHPKTGQCPCRPGVTGQACDRCQLGFFGFSIKGCRDCRCSPLGAASSQCHENST-- 993
Query: 233 QCECKDNVEGAQC 245
C C+ G +C
Sbjct: 994 -CVCRPGFVGYKC 1005
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGRC-- 75
G CL C +GP+CE+C +Y G+ F C C C P S G
Sbjct: 732 GICL-CGHHTEGPSCERCMPGFY---GNAFSGRADDCQPCPC-PGQSACATIPESGDVVC 786
Query: 76 -QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
C PG G +C+ C+ + G +G C+ C+C+ + NCD G C
Sbjct: 787 THCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVGNCDPHSGHCLRC 846
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
++ G H E R+ F + + +C + L G CN G+C C
Sbjct: 847 LYNTTG-AHCE---HCREGFYGSAVATRPVDKCAPCSCDL-RGSVSEKTCNPVTGQCVCL 901
Query: 188 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P V+G C RC YD GC+SC+C+P GS++N C GQC C+ V G C
Sbjct: 902 PYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPCRPGVTGQAC 958
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 182 GRCQ-CKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G CQ C+ TG C+RC+ N+Y + + C+ C+C+PAGS+ + CD+ G C CK
Sbjct: 359 GHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDCHPAGSL--SLQCDN-SGVCPCKPT 415
Query: 240 VEGAQC 245
V G +C
Sbjct: 416 VTGWKC 421
>gi|338720346|ref|XP_001499447.3| PREDICTED: laminin subunit gamma-3, partial [Equus caballus]
Length = 1458
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG CL C+ GP+CE+C++N+Y+ C C+C+
Sbjct: 209 CNCSGHSEECTFDRELFRSTGHGGRCLRCRDHTAGPHCERCQENFYRWDRRTPCQPCDCH 268
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 269 PAGSLRLQCDDAGTCVCKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLG---TCDP 325
Query: 121 VKGQC 125
G+C
Sbjct: 326 RSGRC 330
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 270 AGSLRLQCDDAGTCVCKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLG---TCDPR 326
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 327 SGRCPCKENVEGNLC 341
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 88/189 (46%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRC 75
GHCL C + G +CE C+D YY + D C C+CNP GS++ Q C+ G+C
Sbjct: 712 GHCLRCLHNTTGAHCEHCQDGYYGSALAPRPADK-CMPCSCNPGGSVSEQRPCDPVTGQC 770
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VTG C C YD GC+SC+C+P GS ++ C GQC
Sbjct: 771 SCLPHVTGRDCGLCSPGFYDLQPGRGCQSCKCHPLGSQED--QCHPKTGQCPC------- 821
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R E + R G + R C+ PLG + QC+ C C+PG G K
Sbjct: 822 RPGVEGQACDRCQLGFFGFSVKGCRACR--CSPLGAASA---QCHENSTCVCRPGFVGYK 876
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 877 CDRCQDNFF 885
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 89/219 (40%), Gaps = 42/219 (19%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ C C C S N+ N+ G C
Sbjct: 657 CTHCPPGQRGRRCETCDDGFFGDPLGLSGAPQPCQQCQC----SGNIDPNTVGNCDPLSG 712
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C TG C+ C +Y A C C CNP GSV CD V GQC
Sbjct: 713 HCLRCLHNTTGAHCEHCQDGYYGSALAPRPADKCMPCSCNPGGSVSEQRPCDPVTGQCSC 772
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDL---RRCKR-DTYPLGHGGSLNLQCNSE-G 182
L + ++ +DL R C+ +PLG S QC+ + G
Sbjct: 773 ------------LPHVTGRDCGLCSPGFYDLQPGRGCQSCKCHPLG---SQEDQCHPKTG 817
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+C C+PGV G CDRC + + F GC++C C+P G+
Sbjct: 818 QCPCRPGVEGQACDRCQLGFFGFSVKGCRACRCSPLGAA 856
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 97/253 (38%), Gaps = 56/253 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGR--- 74
G CL C +GP+CE+C +Y G+ F C C C G E R
Sbjct: 603 GICL-CGHHTEGPSCERCLPGFY---GNPFTGRADDCQPCPCP--GQSACTTIPESREVV 656
Query: 75 -CQCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCES 127
C PG G +C+ CD + G +G C+ C+C+ NCD + G C
Sbjct: 657 CTHCPPGQRGRRCETCDDGFFGDPLGLSGAPQPCQQCQCSGNIDPNTVGNCDPLSGHCLR 716
Query: 128 AQLSSRGRVHTEL----RVQSRKNFDPA----------GNRIWDLRRCKRDTYPLGHGGS 173
++ G H E S PA G + + R C T
Sbjct: 717 CLHNTTG-AHCEHCQDGYYGSALAPRPADKCMPCSCNPGGSVSEQRPCDPVT-------- 767
Query: 174 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKG 232
G+C C P VTG C C YD GC+SC+C+P GS ++ C G
Sbjct: 768 --------GQCSCLPHVTGRDCGLCSPGFYDLQPGRGCQSCKCHPLGSQED--QCHPKTG 817
Query: 233 QCECKDNVEGAQC 245
QC C+ VEG C
Sbjct: 818 QCPCRPGVEGQAC 830
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 79/216 (36%), Gaps = 54/216 (25%)
Query: 29 CQGDRDGPNCEKCRDNYYQK-------SGDNFCTACNCNPIGS-------LNLQCNSEGR 74
CQ + G +CE+CR + + N C CNC+ L GR
Sbjct: 174 CQHNTTGTDCERCRPFFQDRPWARGTAEAANECLPCNCSGHSEECTFDRELFRSTGHGGR 233
Query: 75 C-QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C +C+ G C+RC N Y + C+ C+C+PAGS++ CD G C +
Sbjct: 234 CLRCRDHTAGPHCERCQENFYRWDRRTPCQPCDCHPAGSLRL--QCDDA-GTCVCKPTVT 290
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS----------EG 182
W RC + L GG CN G
Sbjct: 291 G----------------------WKCDRCLPGFHSLSEGGCRPCTCNPAGSLGTCDPRSG 328
Query: 183 RCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
RC CK V G+ CDRC ++ AGC SC C
Sbjct: 329 RCPCKENVEGNLCDRCRPGTFNLQPHNPAGCSSCFC 364
>gi|395506301|ref|XP_003757473.1| PREDICTED: laminin subunit gamma-3 [Sarcophilus harrisii]
Length = 1559
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S CF+D ELY TG GGHC +C+ GP+CE C++N+Y+ C C+C+
Sbjct: 306 CNCSGLSEECFYDWELYRSTGRGGHCRNCRDHTAGPHCEYCQENFYRWDQQQPCQPCDCH 365
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC++ G C+CKP VTG KCDRC + E GC++C CN AGS+ CDS
Sbjct: 366 PAGSLSLQCDNSGTCECKPSVTGWKCDRCLTGFHSLSEGGCRACACNGAGSLG---PCDS 422
Query: 121 VKGQC 125
G+C
Sbjct: 423 RNGRC 427
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC++ G C+CKP VTG KCDRC + E GC++C CN AGS+ CDS
Sbjct: 367 AGSLSLQCDNSGTCECKPSVTGWKCDRCLTGFHSLSEGGCRACACNGAGSLG---PCDSR 423
Query: 231 KGQCECKDNVEGAQC 245
G+C CKD VEG C
Sbjct: 424 NGRCPCKDKVEGYLC 438
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQ--CNSE-GRCQ 76
GHCL C + G +CE+C++ +Y + + CT C+CN GS Q C+ G+C
Sbjct: 812 GHCLRCLYNTTGAHCEQCQEGFYGSALAPHPLDKCTPCSCNSSGSTREQGACDPRTGQCS 871
Query: 77 CKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRG 134
C P VTG C C YD E GC+SC+C+P GS +N C V GQC +S
Sbjct: 872 CLPHVTGRDCSHCSPGFYDLQPERGCRSCKCHPVGSQEN--QCHPVTGQCPCLPGVSGVA 929
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H + D G R C + PL GS+ QC+ C CKPG G K
Sbjct: 930 CTHCQP--------DFFGFSAKGCRAC--NCSPL---GSVTTQCHENSTCVCKPGFVGYK 976
Query: 195 CDRCDVNHYDFGE-AGCKSC 213
CD C N + E + C+ C
Sbjct: 977 CDHCKENFFLTAEGSQCQEC 996
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 95/238 (39%), Gaps = 35/238 (14%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGRC---QCKP 79
C +GP CE+C +Y G+ F C C C P S G C
Sbjct: 707 CLHHTEGPYCERCTSGFY---GNPFLGHVDDCKPCPC-PGQSACTTIPESGEVVCTHCPK 762
Query: 80 GVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G G C+ CD + G +G C+ C+CN NC+ G C ++
Sbjct: 763 GQRGRLCEICDDGFFGDPLGRSGPRQPCQRCQCNGNVDPNAVGNCNPTTGHCLRCLYNTT 822
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG--HGGSLNLQ--CNSE-GRCQCKP 188
G H E Q ++ F + L +C P GS Q C+ G+C C P
Sbjct: 823 G-AHCE---QCQEGFYGSALAPHPLDKCT----PCSCNSSGSTREQGACDPRTGQCSCLP 874
Query: 189 GVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG C C YD E GC+SC+C+P GS +N C V GQC C V G C
Sbjct: 875 HVTGRDCSHCSPGFYDLQPERGCRSCKCHPVGSQEN--QCHPVTGQCPCLPGVSGVAC 930
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 97/243 (39%), Gaps = 45/243 (18%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C CN N+ N+ G C
Sbjct: 757 CTHCPKGQRGRLCEICDDGFF---GDPLGRSGPRQPCQRCQCNG----NVDPNAVGNCNP 809
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C++C Y A C C CN +GS + CD GQ
Sbjct: 810 TTGHCLRCLYNTTGAHCEQCQEGFYGSALAPHPLDKCTPCSCNSSGSTREQGACDPRTGQ 869
Query: 125 CE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EG 182
C ++ R H S +D R R CK +P+G S QC+ G
Sbjct: 870 CSCLPHVTGRDCSHC-----SPGFYDLQPER--GCRSCK--CHPVG---SQENQCHPVTG 917
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+C C PGV+G C C + + F GC++C C+P GSV T C C CK G
Sbjct: 918 QCPCLPGVSGVACTHCQPDFFGFSAKGCRACNCSPLGSV--TTQCHE-NSTCVCKPGFVG 974
Query: 243 AQC 245
+C
Sbjct: 975 YKC 977
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 93/245 (37%), Gaps = 63/245 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNYYQK-------SGDN 52
C CNG ++ C D+ GG + CQ + G +CE+C Y + N
Sbjct: 250 CKCNGHASECVLDE--------GGQLVCSCQHNTTGTDCERCLPFYQDRPWARGTAEAAN 301
Query: 53 FCTACNCNPIGS-------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDF-GEAGCKS 103
C CNC+ + L G C+ C+ G C+ C N Y + + C+
Sbjct: 302 ECLPCNCSGLSEECFYDWELYRSTGRGGHCRNCRDHTAGPHCEYCQENFYRWDQQQPCQP 361
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+C+PAGS+ + CD+ G CE + S G W RC
Sbjct: 362 CDCHPAGSL--SLQCDN-SGTCE-CKPSVTG---------------------WKCDRCLT 396
Query: 164 DTYPLGHGGSLNLQCNSEG----------RCQCKPGVTGDKCDRCDVNHYDF---GEAGC 210
+ L GG CN G RC CK V G CDRC ++ +GC
Sbjct: 397 GFHSLSEGGCRACACNGAGSLGPCDSRNGRCPCKDKVEGYLCDRCQPGTFNLQPHNPSGC 456
Query: 211 KSCEC 215
SC C
Sbjct: 457 TSCFC 461
>gi|296482091|tpg|DAA24206.1| TPA: laminin, gamma 3-like [Bos taurus]
Length = 1589
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ +GHGG CL C+ GP+CE+C++N+Y+ S C C+C+
Sbjct: 414 CNCSGHSEECTFDRELFRSSGHGGRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPCDCH 473
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC+ G C CKP V G KCDRC + E GC+ C CNP GS+ CD
Sbjct: 474 PAGSLRLQCDDLGTCVCKPTVMGWKCDRCLSGFHSLSEGGCRPCTCNPVGSLG---TCDP 530
Query: 121 VKGQC 125
G+C
Sbjct: 531 RSGRC 535
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL LQC+ G C CKP V G KCDRC + E GC+ C CNP GS+ CD
Sbjct: 475 AGSLRLQCDDLGTCVCKPTVMGWKCDRCLSGFHSLSEGGCRPCTCNPVGSLG---TCDPR 531
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG+ C
Sbjct: 532 SGRCHCKENVEGSLC 546
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 182 GRC-QCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
GRC C+ G C+RC N Y + + C+ C+C+PAGS++ CD + G C CK
Sbjct: 437 GRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPCDCHPAGSLRL--QCDDL-GTCVCKPT 493
Query: 240 VEGAQC 245
V G +C
Sbjct: 494 VMGWKC 499
>gi|359070697|ref|XP_002691654.2| PREDICTED: laminin subunit gamma-3 [Bos taurus]
Length = 1470
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ +GHGG CL C+ GP+CE+C++N+Y+ S C C+C+
Sbjct: 328 CNCSGHSEECTFDRELFRSSGHGGRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPCDCH 387
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC+ G C CKP V G KCDRC + E GC+ C CNP GS+ CD
Sbjct: 388 PAGSLRLQCDDLGTCVCKPTVMGWKCDRCLSGFHSLSEGGCRPCTCNPVGSLG---TCDP 444
Query: 121 VKGQC 125
G+C
Sbjct: 445 RSGRC 449
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL LQC+ G C CKP V G KCDRC + E GC+ C CNP GS+ CD
Sbjct: 389 AGSLRLQCDDLGTCVCKPTVMGWKCDRCLSGFHSLSEGGCRPCTCNPVGSLG---TCDPR 445
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG+ C
Sbjct: 446 SGRCHCKENVEGSLC 460
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 182 GRC-QCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
GRC C+ G C+RC N Y + + C+ C+C+PAGS++ CD + G C CK
Sbjct: 351 GRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPCDCHPAGSLRL--QCDDL-GTCVCKPT 407
Query: 240 VEGAQC 245
V G +C
Sbjct: 408 VMGWKC 413
>gi|441623763|ref|XP_003276796.2| PREDICTED: laminin subunit gamma-3 [Nomascus leucogenys]
Length = 1556
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGGHC C+ GP+CE C++N+Y C C+C+
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGHCHHCRDHTAGPHCEHCQENFYHWDPRMPCQPCDCH 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 PAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 87/189 (46%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 810 GHCLRCLHNTTGDHCEHCQEGFYGSALVPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 868
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VTG C RC +D GC+SC+C+P GS ++ C GQC
Sbjct: 869 SCLPHVTGRDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQCTC------- 919
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R + R G I R C+ PLG + QC+ G C C+PG G K
Sbjct: 920 RPGVTGQACDRCQLGFFGFSIKGCRACR--CSPLGAASA---QCHENGTCVCRPGFEGYK 974
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 975 CDRCHDNFF 983
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 755 CTHCPPGQRGRRCEVCDDGFF---GDPLGLSGHPQPCHQCQC----SGNVDPNAVGNCDP 807
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TGD C+ C Y C C C+P GSV CD V GQ
Sbjct: 808 LSGHCLRCLHNTTGDHCEHCQEGFYGSALVPRPADKCMPCSCHPQGSVSEQMPCDPVTGQ 867
Query: 125 CESAQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE 181
C H R SR FD R R CK +PLG S QC+ +
Sbjct: 868 CSCLP-------HVTGRDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPK 913
Query: 182 -GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C C+PGVTG CDRC + + F GC++C C+P G+ + C G C C+
Sbjct: 914 TGQCTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCVCRPGF 970
Query: 241 EGAQC 245
EG +C
Sbjct: 971 EGYKC 975
>gi|432106286|gb|ELK32172.1| Usherin [Myotis davidii]
Length = 5009
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 123/263 (46%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKE-----LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-----SG 50
C C+G S C +D + G GG C DC+ + G NCE C++++++ S
Sbjct: 496 CQCHGHSRSCHYDISEDPFPSEHHRGGGGVCDDCEHNTTGRNCELCKEHFFRPVGADPSA 555
Query: 51 DNFCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCD---VNHYDFGEAGCKSC 104
+ C C C+ G+ N L C+ G +C CK +G +C+RC N + GC+ C
Sbjct: 556 TDGCQPCECDAAGTRNGSLLCDQMGGQCACKRRASGRRCNRCQDGFFNLHGLDPDGCRPC 615
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+ C GQC A + + ++F G + RC
Sbjct: 616 NCNTSGTEDGDVTCHPHSGQCTCKANVIGLRCDRCSFGFKFLRSFHDGG---CEPCRC-- 670
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+P G L C+ G+C+CK +G +CD C + Y GCK+C C+PAGS+
Sbjct: 671 --HPFGSASKL---CDPLSGQCECKAQASGLRCDTCREHFYGLDVTGCKACACHPAGSLP 725
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK +V G QC
Sbjct: 726 GTV-CDAGTGQCRCKPHVGGRQC 747
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCK 78
H G C C+ + G C++C + + D C C C+P GS + C+ G+C+CK
Sbjct: 632 HSGQC-TCKANVIGLRCDRCSFGFKFLRSFHDGGCEPCRCHPFGSASKLCDPLSGQCECK 690
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
+G +CD C + Y GCK+C C+PAGS+ T CD+ GQC R + H
Sbjct: 691 AQASGLRCDTCREHFYGLDVTGCKACACHPAGSLPGTV-CDAGTGQC-------RCKPHV 742
Query: 139 ELRVQS---RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDK 194
R +F N + C D +G L C+ S G+C CK GVTG +
Sbjct: 743 GGRQCDGCLEGSFYLLQNNSFLCLPCDCDKTGTVNGSVL---CDKSTGQCPCKSGVTGLR 799
Query: 195 CDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +C + Y+ GC+ CEC+PAGS+ T CD GQC C +G +C
Sbjct: 800 CSQCQPHRYNLTAGDFRGCRVCECDPAGSLPGT-TCDPSSGQCRCLPKRQGRRC 852
Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 111/236 (47%), Gaps = 28/236 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNPIGSLN--LQCNSE-GRCQC 77
GG C C+ G C +C+D ++ G + C CNCN G+ + + C+ G+C C
Sbjct: 580 GGQCA-CKRRASGRRCNRCQDGFFNLHGLDPDGCRPCNCNTSGTEDGDVTCHPHSGQCTC 638
Query: 78 KPGVTGDKCDRCDVNH---YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G +CDRC F + GC+ C C+P GS CD + GQCE +S
Sbjct: 639 KANVIGLRCDRCSFGFKFLRSFHDGGCEPCRCHPFGSASKL--CDPLSGQCECKAQASGL 696
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL-NLQCNS-EGRCQCKPGVTG 192
R T R++F G + + C +P GSL C++ G+C+CKP V G
Sbjct: 697 RCDT-----CREHF--YGLDVTGCKACA--CHP---AGSLPGTVCDAGTGQCRCKPHVGG 744
Query: 193 DKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CD C + + C C+C+ G+V + CD GQC CK V G +C
Sbjct: 745 RQCDGCLEGSFYLLQNNSFLCLPCDCDKTGTVNGSVLCDKSTGQCPCKSGVTGLRC 800
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 59/201 (29%), Positives = 84/201 (41%), Gaps = 15/201 (7%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCN-SEGRCQCKP 79
G C C+ G C +C+ + Y + +F C C C+P GSL C+ S G+C+C P
Sbjct: 787 GQC-PCKSGVTGLRCSQCQPHRYNLTAGDFRGCRVCECDPAGSLPGTTCDPSSGQCRCLP 845
Query: 80 GVTGDKCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
G +CD+C Y G A GC C C+ AG+ + C+S GQC S+ G
Sbjct: 846 KRQGRRCDQCQPGFYISPGNATGCLPCSCHTAGAAHHI--CNSRTGQCVCQDASTAGLSC 903
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
R FDP + + + G GG N + S R VTG+ C
Sbjct: 904 DRCR-DLYFGFDPQIGSVSEKNSKNKAPQDHGGGGRDNQEDVSPVR-----SVTGNGCAG 957
Query: 198 CDVNHYDFGEAGCKSCECNPA 218
D + A C+ P+
Sbjct: 958 ADPSLPPMDAAAAFRCDTAPS 978
>gi|119904223|ref|XP_597117.3| PREDICTED: laminin subunit gamma-3 [Bos taurus]
Length = 1663
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ +GHGG CL C+ GP+CE+C++N+Y+ S C C+C+
Sbjct: 414 CNCSGHSEECTFDRELFRSSGHGGRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPCDCH 473
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC+ G C CKP V G KCDRC + E GC+ C CNP GS+ CD
Sbjct: 474 PAGSLRLQCDDLGTCVCKPTVMGWKCDRCLSGFHSLSEGGCRPCTCNPVGSLG---TCDP 530
Query: 121 VKGQC 125
G+C
Sbjct: 531 RSGRC 535
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL LQC+ G C CKP V G KCDRC + E GC+ C CNP GS+ CD
Sbjct: 475 AGSLRLQCDDLGTCVCKPTVMGWKCDRCLSGFHSLSEGGCRPCTCNPVGSLG---TCDPR 531
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG+ C
Sbjct: 532 SGRCHCKENVEGSLC 546
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 86/189 (45%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRC 75
G CL C + G +C CR+ +Y + D C C+CNP GS++ Q C+ G+C
Sbjct: 917 GRCLRCLHNTTGAHCGHCREGFYGSALAPRPADK-CAPCSCNPEGSVSEQRPCDPVTGQC 975
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VTG C C YD GC+ C+C+P GS ++ C GQC
Sbjct: 976 SCLPHVTGRDCGHCSPGFYDLQPGRGCRRCKCHPWGSQED--QCHPKTGQCPC------- 1026
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R E + R G + R C+ PLG + + QC+ C C+PG G K
Sbjct: 1027 RPGVEGQTCDRCQLGFFGFSVKGCRDCR--CSPLG---ATSPQCHENSTCVCRPGFVGYK 1081
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 1082 CDRCQDNFF 1090
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 97/243 (39%), Gaps = 45/243 (18%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 862 CTHCPRSQRGRRCEICDDGFF---GDPLGLSGRPQPCQPCQC----SGNVDPNAVGNCDP 914
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C C Y A C C CNP GSV CD V GQ
Sbjct: 915 LSGRCLRCLHNTTGAHCGHCREGFYGSALAPRPADKCAPCSCNPEGSVSEQRPCDPVTGQ 974
Query: 125 CE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-G 182
C ++ R H S +D R RRCK + GS QC+ + G
Sbjct: 975 CSCLPHVTGRDCGHC-----SPGFYDLQPGR--GCRRCKCHPW-----GSQEDQCHPKTG 1022
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+C C+PGV G CDRC + + F GC+ C C+P G+ +P C C C+ G
Sbjct: 1023 QCPCRPGVEGQTCDRCQLGFFGFSVKGCRDCRCSPLGA--TSPQCHE-NSTCVCRPGFVG 1079
Query: 243 AQC 245
+C
Sbjct: 1080 YKC 1082
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 89/245 (36%), Gaps = 63/245 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG ++ C D+E G CQ + G +CE+C + + N
Sbjct: 358 CKCNGHASECGPDEE-------GRLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAANE 410
Query: 54 CTACNCNPIGS-------LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFG-EAGCKSC 104
C CNC+ L GRC C+ G C+RC N Y + + C+ C
Sbjct: 411 CLPCNCSGHSEECTFDRELFRSSGHGGRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPC 470
Query: 105 ECNPAGSVKNTPNCDSVKG-QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
+C+PAGS++ CD + C+ + W RC
Sbjct: 471 DCHPAGSLRL--QCDDLGTCVCKPTVMG------------------------WKCDRCLS 504
Query: 164 DTYPLGHGGSLNLQCNS----------EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGC 210
+ L GG CN GRC CK V G CDRC ++ AGC
Sbjct: 505 GFHSLSEGGCRPCTCNPVGSLGTCDPRSGRCHCKENVEGSLCDRCRPGAFNLQPHNPAGC 564
Query: 211 KSCEC 215
SC C
Sbjct: 565 SSCFC 569
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 182 GRC-QCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
GRC C+ G C+RC N Y + + C+ C+C+PAGS++ CD + G C CK
Sbjct: 437 GRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPCDCHPAGSLRL--QCDDL-GTCVCKPT 493
Query: 240 VEGAQC 245
V G +C
Sbjct: 494 VMGWKC 499
>gi|326930432|ref|XP_003211351.1| PREDICTED: laminin subunit gamma-3-like [Meleagris gallopavo]
Length = 1577
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S CF+D EL+ RTGHGGHC +C+ + GP CE+CR N+Y+ C C+C+
Sbjct: 324 CNCSGRSEECFYDAELFRRTGHGGHCRNCRDNTAGPRCEQCRQNHYRWEQQAACQPCHCH 383
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL QC+ G C CK VTG KC+RC ++ E GC+ C C+PAGSV CD
Sbjct: 384 PAGSLRPQCDRSGTCTCKANVTGWKCERCKDGYHSLSEGGCRPCACDPAGSVG---TCDP 440
Query: 121 VKGQC 125
G C
Sbjct: 441 STGHC 445
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 95/200 (47%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGS-LNLQ-CNS-EGRCQ 76
G CL C + G C +C+ +Y S C CNCNP GS L L+ C+ G+C
Sbjct: 829 GRCLRCLHNTTGEQCHQCQPGFYGDALAPSPAGKCAPCNCNPDGSALGLEGCDPGTGQCH 888
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V G C+ C +Y A GCKSCEC+P GS + C +V GQC S Q G
Sbjct: 889 CLPHVLGRTCELCQHGYYGLQAAVGCKSCECHPMGSQDS--GCHAVTGQC-SCQPGVTG- 944
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
LR ++ G + R C+ + PLG S + QC C C+PG G K
Sbjct: 945 ----LRCDRCEH----GFFGFSARGCRACNCSPLG---SASAQCYENSTCLCRPGFVGYK 993
Query: 195 CDRCDVNHY-DFGEAGCKSC 213
CDRC N + D + C+ C
Sbjct: 994 CDRCQANFFPDPPSSSCQPC 1013
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL QC+ G C CK VTG KC+RC ++ E GC+ C C+PAGSV CD
Sbjct: 385 AGSLRPQCDRSGTCTCKANVTGWKCERCKDGYHSLSEGGCRPCACDPAGSVG---TCDPS 441
Query: 231 KGQCECKDNVEGAQC 245
G C CK+ VEG C
Sbjct: 442 TGHCTCKEKVEGHLC 456
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 105/246 (42%), Gaps = 51/246 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGRC---QCKP 79
C + +GP+CE+C +Y G+ F C C C P S Q S G C P
Sbjct: 724 CLHNTEGPSCERCSSGFY---GNPFTGQPDDCKPCPC-PDRSPCTQLPSSGDVVCTHCPP 779
Query: 80 GVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G G +C+ CD + G+ G C C+C+ + NCDS+ G+C ++
Sbjct: 780 GQRGKRCELCDDGFFGDPLGQRGPVRPCIPCQCHGNVDLNAVGNCDSLSGRCLRCLHNTT 839
Query: 134 GRVHTELRVQSRKNF-------DPAG-----NRIWDLRRCKRDTYPLGHGGSLNLQCNS- 180
G E Q + F PAG N C D LG G C+
Sbjct: 840 G----EQCHQCQPGFYGDALAPSPAGKCAPCN-------CNPDGSALGLEG-----CDPG 883
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C C P V G C+ C +Y A GCKSCEC+P GS + C +V GQC C+
Sbjct: 884 TGQCHCLPHVLGRTCELCQHGYYGLQAAVGCKSCECHPMGSQDS--GCHAVTGQCSCQPG 941
Query: 240 VEGAQC 245
V G +C
Sbjct: 942 VTGLRC 947
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 91/217 (41%), Gaps = 38/217 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-Q 76
C C + G CE C D ++ Q+ C C C+ LN N GRC +
Sbjct: 774 CTHCPPGQRGKRCELCDDGFFGDPLGQRGPVRPCIPCQCHGNVDLNAVGNCDSLSGRCLR 833
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C TG++C +C Y A C C CNP GS CD GQC
Sbjct: 834 CLHNTTGEQCHQCQPGFYGDALAPSPAGKCAPCNCNPDGSALGLEGCDPGTGQCHCLP-H 892
Query: 132 SRGRV-----HTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRC 184
GR H +Q+ CK + +P+G S + C++ G+C
Sbjct: 893 VLGRTCELCQHGYYGLQAAVG-------------CKSCECHPMG---SQDSGCHAVTGQC 936
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
C+PGVTG +CDRC+ + F GC++C C+P GS
Sbjct: 937 SCQPGVTGLRCDRCEHGFFGFSARGCRACNCSPLGSA 973
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 186 CKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
C+ G +C++C NHY + +A C+ C C+PAGS++ P CD G C CK NV G +
Sbjct: 352 CRDNTAGPRCEQCRQNHYRWEQQAACQPCHCHPAGSLR--PQCDR-SGTCTCKANVTGWK 408
Query: 245 C 245
C
Sbjct: 409 C 409
>gi|350579718|ref|XP_003480667.1| PREDICTED: laminin subunit gamma-3-like, partial [Sus scrofa]
Length = 874
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ +GHGG CL C+ GP+CE+C++N+Y+ + C C+C+
Sbjct: 327 CNCSGHSEECIFDRELFRTSGHGGRCLHCRDHTAGPHCERCQENFYRWNPQMPCQPCDCH 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC+ G C+CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 387 PAGSLHLQCDDSGTCKCKPTVTGWKCDRCQPGFHSLSEGGCRPCTCNSAGSLG---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C+CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 388 AGSLHLQCDDSGTCKCKPTVTGWKCDRCQPGFHSLSEGGCRPCTCNSAGSLG---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 92/244 (37%), Gaps = 61/244 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-------GDNF 53
C CNG ++ C D+E G CQ + GP+CE+C + + N
Sbjct: 271 CKCNGHASECGPDEE-------GQLACRCQHNTTGPDCERCLPFFQDRPWARGTAEAANE 323
Query: 54 CTACNCNPIGS-------LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDF-GEAGCKSC 104
C CNC+ L GRC C+ G C+RC N Y + + C+ C
Sbjct: 324 CLPCNCSGHSEECIFDRELFRTSGHGGRCLHCRDHTAGPHCERCQENFYRWNPQMPCQPC 383
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
+C+PAGS+ CD G C+ + W RC+
Sbjct: 384 DCHPAGSLHL--QCDD-SGTCKCKPTVTG----------------------WKCDRCQPG 418
Query: 165 TYPLGHGGSLNLQCNS----------EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCK 211
+ L GG CNS GRC CK V G+ CDRC ++ AGC
Sbjct: 419 FHSLSEGGCRPCTCNSAGSLGTCDPRSGRCPCKENVEGNLCDRCRPGTFNLQPHNPAGCS 478
Query: 212 SCEC 215
SC C
Sbjct: 479 SCFC 482
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 182 GRC-QCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
GRC C+ G C+RC N Y + + C+ C+C+PAGS+ CD G C+CK
Sbjct: 350 GRCLHCRDHTAGPHCERCQENFYRWNPQMPCQPCDCHPAGSLHL--QCDD-SGTCKCKPT 406
Query: 240 VEGAQC 245
V G +C
Sbjct: 407 VTGWKC 412
>gi|440900086|gb|ELR51295.1| Laminin subunit gamma-3, partial [Bos grunniens mutus]
Length = 1528
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ +GHGG CL C+ GP+CE+C++N+Y+ S C C+C+
Sbjct: 256 CNCSGHSEECTFDRELFRSSGHGGRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPCDCH 315
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC+ G C CK V G KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 316 PAGSLRLQCDDLGTCVCKSTVMGWKCDRCLSGFHSLSEGGCRPCTCNPAGSLG---TCDP 372
Query: 121 VKGQC 125
G+C
Sbjct: 373 RSGRC 377
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL LQC+ G C CK V G KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 317 AGSLRLQCDDLGTCVCKSTVMGWKCDRCLSGFHSLSEGGCRPCTCNPAGSLG---TCDPR 373
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG+ C
Sbjct: 374 SGRCHCKENVEGSLC 388
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 86/189 (45%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRC 75
G CL C + G +C CR+ +Y + D CT C+CNP GS++ Q C+ G+C
Sbjct: 770 GRCLRCLHNTTGAHCGHCREGFYGSALAPRPADK-CTPCSCNPEGSVSEQRPCDPVTGQC 828
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VTG C C YD GC+ C+C+P GS ++ C GQC
Sbjct: 829 SCLPHVTGRDCGHCSPGFYDLQPGRGCRRCKCHPWGSRED--QCHPKTGQCPC------- 879
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R E R G + R C+ PLG + + QC+ C C+PG G K
Sbjct: 880 RPGVEGHTCDRCQLGFFGFSVKGCRDCR--CSPLG---ATSPQCHENSTCVCRPGFVGYK 934
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 935 CDRCQDNFF 943
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 97/243 (39%), Gaps = 45/243 (18%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 715 CTHCPPSQRGRRCEICDDGFF---GDPLGLSGRPQPCQPCQC----SGNVDPNAVGNCDP 767
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C C Y A C C CNP GSV CD V GQ
Sbjct: 768 LFGRCLRCLHNTTGAHCGHCREGFYGSALAPRPADKCTPCSCNPEGSVSEQRPCDPVTGQ 827
Query: 125 CE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-G 182
C ++ R H S +D R RRCK + GS QC+ + G
Sbjct: 828 CSCLPHVTGRDCGHC-----SPGFYDLQPGR--GCRRCKCHPW-----GSREDQCHPKTG 875
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+C C+PGV G CDRC + + F GC+ C C+P G+ +P C C C+ G
Sbjct: 876 QCPCRPGVEGHTCDRCQLGFFGFSVKGCRDCRCSPLGA--TSPQCHE-NSTCVCRPGFVG 932
Query: 243 AQC 245
+C
Sbjct: 933 YKC 935
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 90/245 (36%), Gaps = 63/245 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG ++ C D+E G CQ + G +CE+C + + N
Sbjct: 200 CKCNGHASECGPDEE-------GRLACRCQHNTTGRDCERCLPFFQDRPWARGTAEAANE 252
Query: 54 CTACNCNPIGS-------LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFG-EAGCKSC 104
C CNC+ L GRC C+ G C+RC N Y + + C+ C
Sbjct: 253 CLPCNCSGHSEECTFDRELFRSSGHGGRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPC 312
Query: 105 ECNPAGSVKNTPNCDSVKG-QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
+C+PAGS++ CD + C+S + W RC
Sbjct: 313 DCHPAGSLRL--QCDDLGTCVCKSTVMG------------------------WKCDRCLS 346
Query: 164 DTYPLGHGGSLNLQCNS----------EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGC 210
+ L GG CN GRC CK V G CDRC ++ AGC
Sbjct: 347 GFHSLSEGGCRPCTCNPAGSLGTCDPRSGRCHCKENVEGSLCDRCRPGAFNLQPHNPAGC 406
Query: 211 KSCEC 215
SC C
Sbjct: 407 SSCFC 411
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 182 GRC-QCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
GRC C+ G C+RC N Y + + C+ C+C+PAGS++ CD + G C CK
Sbjct: 279 GRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPCDCHPAGSLRL--QCDDL-GTCVCKST 335
Query: 240 VEGAQC 245
V G +C
Sbjct: 336 VMGWKC 341
>gi|426226089|ref|XP_004007186.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-3 [Ovis
aries]
Length = 1632
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S +C FD+EL+ +GHGG CL C+ GP+CE+C+ N+Y+ + C C+C+
Sbjct: 412 CNCSGHSEQCTFDRELFRSSGHGGRCLRCRAHTAGPHCERCQKNFYRWNPRTPCQPCDCH 471
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC+ G C CKP VTG KCDRC + E G + C CNPAGS+ CD
Sbjct: 472 PAGSLRLQCDDLGTCVCKPTVTGWKCDRCLPGFHSLSEGGXRPCTCNPAGSLG---TCDP 528
Query: 121 VKGQC 125
G+C
Sbjct: 529 RSGRC 533
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL LQC+ G C CKP VTG KCDRC + E G + C CNPAGS+ CD
Sbjct: 473 AGSLRLQCDDLGTCVCKPTVTGWKCDRCLPGFHSLSEGGXRPCTCNPAGSLG---TCDPR 529
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 530 SGRCPCKENVEGNLC 544
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 87/246 (35%), Gaps = 76/246 (30%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGRC---- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 856 CTHCPPSQRGRRCEICDDGFF---GDPLXGRPQPCQPCQC----SGNVDPNAVGNCDPLS 908
Query: 76 ----QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCE 126
+C TG C+ C Y A C C CNP GS CD GQC
Sbjct: 909 GRCLRCLYNTTGVHCEHCQEGFYGNALAPRPADKCMPCSCNPEGSASEQRPCDPATGQCA 968
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG------GSLNLQCNS 180
L HG GSL QC+
Sbjct: 969 C----------------------------------------LPHGCKCHPWGSLEDQCHP 988
Query: 181 E-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G+C C+PGV G CDRC + + F GC+ C C+P G+ +P C C CK
Sbjct: 989 KTGQCPCRPGVEGQTCDRCQLGFFGFSVKGCRDCRCSPLGA--TSPQCHE-NSTCVCKPG 1045
Query: 240 VEGAQC 245
G +C
Sbjct: 1046 FVGYKC 1051
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 2 NCNGFSNRCFFDKELYNRTGHGGHCLDCQ--------GDRDGPNCEKCRDNYYQKSGDN- 52
NC+ S RC + LYN TG HC CQ R C C N + +
Sbjct: 903 NCDPLSGRCL--RCLYNTTGV--HCEHCQEGFYGNALAPRPADKCMPCSCNPEGSASEQR 958
Query: 53 -----------FCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG 100
C C+P GSL QC+ + G+C C+PGV G CDRC + + F G
Sbjct: 959 PCDPATGQCACLPHGCKCHPWGSLEDQCHPKTGQCPCRPGVEGQTCDRCQLGFFGFSVKG 1018
Query: 101 CKSCECNPAGSVKNTPNC 118
C+ C C+P G+ +P C
Sbjct: 1019 CRDCRCSPLGA--TSPQC 1034
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C+ ++ S C C C+P+G+ + QC+ C CKPG G KCDR
Sbjct: 995 CRPGVEGQTCDRCQLGFFGFSVKG-CRDCRCSPLGATSPQCHENSTCVCKPGFVGYKCDR 1053
Query: 89 CDVNHYDFGEAGCKSCECNP 108
C N++ +G + EC P
Sbjct: 1054 CQ-NNFFLTASGTQCQECPP 1072
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 85/202 (42%), Gaps = 46/202 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQ--CN-SEGRC 75
G CL C + G +CE C++ +Y + D C C+CNP GS + Q C+ + G+C
Sbjct: 909 GRCLRCLYNTTGVHCEHCQEGFYGNALAPRPADK-CMPCSCNPEGSASEQRPCDPATGQC 967
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P C+C+P GS+++ C GQC R
Sbjct: 968 ACLP----------------------HGCKCHPWGSLED--QCHPKTGQCPC-------R 996
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
E + R G + R C+ PLG + + QC+ C CKPG G KC
Sbjct: 997 PGVEGQTCDRCQLGFFGFSVKGCRDCR--CSPLG---ATSPQCHENSTCVCKPGFVGYKC 1051
Query: 196 DRCDVNHYDFGEAGCKSCECNP 217
DRC N++ +G + EC P
Sbjct: 1052 DRCQ-NNFFLTASGTQCQECPP 1072
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 83/227 (36%), Gaps = 60/227 (26%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKS-------GDNFCTACNCNPIGSLNLQCNSE- 72
GH CQ G +CE+C + + N C CNC+ + QC +
Sbjct: 369 GHAXLPCRCQHSTTGTDCERCLPFFQDRPWARGTAEAANECLPCNCS---GHSEQCTFDR 425
Query: 73 ---------GRC-QCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSV 121
GRC +C+ G C+RC N Y + C+ C+C+PAGS++ CD +
Sbjct: 426 ELFRSSGHGGRCLRCRAHTAGPHCERCQKNFYRWNPRTPCQPCDCHPAGSLRL--QCDDL 483
Query: 122 KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS- 180
G C + W RC + L GG CN
Sbjct: 484 -GTCVCKPTVTG----------------------WKCDRCLPGFHSLSEGGXRPCTCNPA 520
Query: 181 ---------EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CK V G+ CDRC ++ AGC SC C
Sbjct: 521 GSLGTCDPRSGRCPCKENVEGNLCDRCRPGAFNLQPHNPAGCSSCFC 567
>gi|359320462|ref|XP_548411.3| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-3 [Canis
lupus familiaris]
Length = 1504
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG CL C+ GP+CE+C++++Y+ S C C+C+
Sbjct: 255 CNCSGHSEECVFDRELFRSTGHGGRCLRCRDHTAGPHCERCQEDFYRWSPRTPCQPCDCH 314
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC++ G C CKP VTG KCDRC + E GC+ C C+ AGS+ CD
Sbjct: 315 PAGSLRLQCDASGTCICKPTVTGWKCDRCLPGFHSLSEGGCRPCSCSHAGSLG---TCDP 371
Query: 121 VKGQC 125
G+C
Sbjct: 372 HSGRC 376
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 92/188 (48%), Gaps = 22/188 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
GHCL C + G +CE+C+D +Y + + CT CNC+P GS++ Q C+ G+C
Sbjct: 758 GHCLRCLHNTTGAHCERCQDGFYGSALAPRPADRCTPCNCHPEGSVSEQRPCDPVTGQCT 817
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V G CDRC + YD GC+SC+C+P GS ++ C GQC R
Sbjct: 818 CLPHVMGRDCDRCSPSFYDLQPGRGCRSCKCHPLGSQED--QCHPKTGQCPC-------R 868
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
E + R G I R C+ PLG + + QC+ C C+PG G KC
Sbjct: 869 PGVEGQACDRCQLGFFGFSIKGCRACR--CSPLG---AASPQCHKNSTCVCRPGFVGYKC 923
Query: 196 DRCDVNHY 203
D C N +
Sbjct: 924 DHCQDNFF 931
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL LQC++ G C CKP VTG KCDRC + E GC+ C C+ AGS+ CD
Sbjct: 316 AGSLRLQCDASGTCICKPTVTGWKCDRCLPGFHSLSEGGCRPCSCSHAGSLG---TCDPH 372
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 373 SGRCPCKENVEGHVC 387
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 101/248 (40%), Gaps = 55/248 (22%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRCQC 77
C C + G CE C D Y+ GD C C C S N+ N+ G C
Sbjct: 703 CTHCPLGQRGRRCEICDDGYF---GDPLGISGAPEPCRPCQC----SGNVDPNAVGNCDS 755
Query: 78 KPG--------VTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+ G TG C+RC Y A C C C+P GSV CD V GQ
Sbjct: 756 QSGHCLRCLHNTTGAHCERCQDGFYGSALAPRPADRCTPCNCHPEGSVSEQRPCDPVTGQ 815
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHGGSLNLQC 178
C T L ++ D +DL R CK +PLG S QC
Sbjct: 816 C------------TCLPHVMGRDCDRCSPSFYDLQPGRGCRSCK--CHPLG---SQEDQC 858
Query: 179 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+ + G+C C+PGV G CDRC + + F GC++C C+P G+ +P C C C+
Sbjct: 859 HPKTGQCPCRPGVEGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SPQCHK-NSTCVCR 915
Query: 238 DNVEGAQC 245
G +C
Sbjct: 916 PGFVGYKC 923
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C+ ++ S C AC C+P+G+ + QC+ C C+PG G KCD
Sbjct: 867 CRPGVEGQACDRCQLGFFGFSIKG-CRACRCSPLGAASPQCHKNSTCVCRPGFVGYKCDH 925
Query: 89 CDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C N + G C+ C P+C S+ + E+A+L +R
Sbjct: 926 CQDNFFLTAGGTHCQEC-----------PSCYSLVKE-EAAKLKAR 959
>gi|4808543|gb|AAD29851.1| laminin gamma-3 chain precursor [Mus musculus]
Length = 1537
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+ELY TGHGGHC C+ GP+CE+C NYY+ S C C+ +
Sbjct: 336 CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDRH 395
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 396 PAGSLSLQCDNSGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCACNVAGSLG---TCDP 452
Query: 121 VKGQC 125
G C
Sbjct: 453 RSGNC 457
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQ-CNS-EGRC 75
H GHCL C + G +CE CR+ +Y + + C C+C+ GS++ + CN G+C
Sbjct: 839 HSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEKTCNPVTGQC 898
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V+G C RC YD GC+SC+C+P GS++N C GQC
Sbjct: 899 VCLPYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPC------- 949
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R + R G I R C+ PLG S QC+ C C+PG G K
Sbjct: 950 RPGVTGQACDRCQLGFFGFSIKGCRDCR--CSPLGAASS---QCHENSTCVCRPGFVGYK 1004
Query: 195 CDRCDVNHYDF-GEAGCKSC 213
CDRC N + G+ GC+ C
Sbjct: 1005 CDRCQDNFFLADGDTGCQEC 1024
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 397 AGSLSLQCDNSGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCACNVAGSLG---TCDPR 453
Query: 231 KGQCECKDNVEGAQC 245
G C CK+NVEG+ C
Sbjct: 454 SGNCPCKENVEGSLC 468
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 96/253 (37%), Gaps = 66/253 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 786 CTHCPPGQRGRRCESCEDGFF---GDPLGLSGAPQPCRRCQC----SGNVDLNAVGNCDP 838
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C+ C Y A C C C+ GSV C+ V GQ
Sbjct: 839 HSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEK-TCNPVTGQ 897
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GS 173
C S GR D RC Y L G GS
Sbjct: 898 CVCLPYVS-GR---------------------DCSRCSPGFYDLQSGRGCQSCKCHPLGS 935
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
L +C+ + G+C C+PGVTG CDRC + + F GC+ C C+P G+ + + +S
Sbjct: 936 LENKCHPKTGQCPCRPGVTGQACDRCQLGFFGFSIKGCRDCRCSPLGAASSQCHENST-- 993
Query: 233 QCECKDNVEGAQC 245
C C+ G +C
Sbjct: 994 -CVCRPGFVGYKC 1005
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGRC-- 75
G CL C +GP+CE+C +Y G+ F C C C P S G
Sbjct: 732 GICL-CGHHTEGPSCERCMPGFY---GNAFSGRADDCQPCPC-PGQSACATIPESGDVVC 786
Query: 76 -QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
C PG G +C+ C+ + G +G C+ C+C+ + NCD G C
Sbjct: 787 THCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVGNCDPHSGHCLRC 846
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
++ G H E R+ F + + +C + L G CN G+C C
Sbjct: 847 LYNTTG-AHCE---HCREGFYGSAVATRPVDKCAPCSCDL-RGSVSEKTCNPVTGQCVCL 901
Query: 188 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P V+G C RC YD GC+SC+C+P GS++N C GQC C+ V G C
Sbjct: 902 PYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPCRPGVTGQAC 958
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 182 GRCQ-CKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G CQ C+ TG C+RC+ N+Y + + C+ C+ +PAGS+ + CD+ G C CK
Sbjct: 359 GHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDRHPAGSL--SLQCDN-SGVCPCKPT 415
Query: 240 VEGAQC 245
V G +C
Sbjct: 416 VTGWKC 421
>gi|410979384|ref|XP_003996065.1| PREDICTED: laminin subunit gamma-3 [Felis catus]
Length = 1540
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD++L+ TGHGG CL C+ GP+CE+C++++Y+ S C C+C+
Sbjct: 288 CNCSGHSEECVFDRDLFRGTGHGGRCLRCRDHTAGPHCERCQEDFYRWSPRTPCQPCDCH 347
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC+ G C CK VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 348 PAGSLRLQCDDSGTCACKATVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLG---TCDP 404
Query: 121 VKGQC 125
G+C
Sbjct: 405 HSGRC 409
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL LQC+ G C CK VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 349 AGSLRLQCDDSGTCACKATVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLG---TCDPH 405
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG QC
Sbjct: 406 SGRCPCKENVEGKQC 420
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 89/189 (47%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQ--CN-SEGRC 75
G CL C + G +CE+C + +Y + D CT C+C P GS++ Q C+ + G+C
Sbjct: 791 GRCLRCLHNTTGAHCERCEEGFYGSALAPRPADK-CTPCSCYPGGSVSEQRPCDPASGQC 849
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VTG C +C YD GC+SC+C+P GS ++ C GQC
Sbjct: 850 TCLPHVTGRDCSQCSPGFYDLRPGRGCRSCKCHPLGSQED--RCHPKTGQCPC------- 900
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R E + +R G I R C+ G+ + QC+ G C C+PG G K
Sbjct: 901 RPGVEGQACNRCQLGFFGFSIKGCRACRCSPV-----GAASAQCHENGTCLCRPGFVGYK 955
Query: 195 CDRCDVNHY 203
C+ C N +
Sbjct: 956 CEHCQENFF 964
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 102/247 (41%), Gaps = 53/247 (21%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNC------NPIGSLNLQCNS 71
C C + G CE C D Y+ GD C C C N +G+ + Q
Sbjct: 736 CTHCPPGQRGRRCEICDDGYF---GDPLGLSGAPQPCRRCQCSGNVDPNAVGNCDPQ--- 789
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQC 125
GRC +C TG C+RC+ Y A C C C P GSV CD GQC
Sbjct: 790 SGRCLRCLHNTTGAHCERCEEGFYGSALAPRPADKCTPCSCYPGGSVSEQRPCDPASGQC 849
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR------RCKRDTYPLGHGGSLNLQCN 179
T L + ++ +DLR CK +PLG S +C+
Sbjct: 850 ------------TCLPHVTGRDCSQCSPGFYDLRPGRGCRSCK--CHPLG---SQEDRCH 892
Query: 180 SE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G+C C+PGV G C+RC + + F GC++C C+P G+ + C G C C+
Sbjct: 893 PKTGQCPCRPGVEGQACNRCQLGFFGFSIKGCRACRCSPVGAA--SAQCHE-NGTCLCRP 949
Query: 239 NVEGAQC 245
G +C
Sbjct: 950 GFVGYKC 956
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 107/245 (43%), Gaps = 36/245 (14%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGR- 74
H G CL C +GP+CE+C +Y G F C C C G E R
Sbjct: 680 HTGICL-CGHHTEGPSCERCLPGFY---GSPFGGRADDCQPCPCP--GQSACTAIPESRE 733
Query: 75 ---CQCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC 125
C PG G +C+ CD ++ G +G C+ C+C+ NCD G+C
Sbjct: 734 VVCTHCPPGQRGRRCEICDDGYFGDPLGLSGAPQPCRRCQCSGNVDPNAVGNCDPQSGRC 793
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQ--CN-SE 181
++ G H E + + F + +C YP GGS++ Q C+ +
Sbjct: 794 LRCLHNTTG-AHCE---RCEEGFYGSALAPRPADKCTPCSCYP---GGSVSEQRPCDPAS 846
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C C P VTG C +C YD GC+SC+C+P GS ++ C GQC C+ V
Sbjct: 847 GQCTCLPHVTGRDCSQCSPGFYDLRPGRGCRSCKCHPLGSQED--RCHPKTGQCPCRPGV 904
Query: 241 EGAQC 245
EG C
Sbjct: 905 EGQAC 909
>gi|292623256|ref|XP_697435.4| PREDICTED: Usherin [Danio rerio]
Length = 5334
Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats.
Identities = 87/307 (28%), Positives = 132/307 (42%), Gaps = 63/307 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH-----GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C C G ++ C ++ L G GG C DC + G NCE+CR +Y++ G
Sbjct: 587 CQCYGHASSCHYNSSLDPHPGEHFRGGGGVCDDCTHNTTGRNCERCRSLFYREVGALLWA 646
Query: 51 DNFCTACNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C AC C+ G++N + E G+C+CK V+G +C++C Y A GC++C
Sbjct: 647 TDVCKACECHSAGTINASLHCEPIGGQCKCKRHVSGRQCNQCQHGFYKLQSALADGCRAC 706
Query: 105 ECNPAGSVKNTPNC--DSVKGQCESAQLS-SRGRVHTELRVQSRKNFD------------ 149
CN AG+V+ C DS + QC++ + + R + + + N D
Sbjct: 707 NCNTAGTVQPDITCHQDSGQCQCKANVIGLTCDRCNYGFKFLNHTNPDGCISCGCDPWGS 766
Query: 150 --------------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-------------- 181
AG R C Y G + L CN
Sbjct: 767 LHQFCNPFTGQCECKAGVRGLLCDTCIPHFYSQNSSG-VCLPCNCSLNGSVPGTSCDAVT 825
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CKP G +CD C ++ + GC C+C+ G+V + CD GQC CK+
Sbjct: 826 GQCKCKPHTEGRRCDVCRDGYHSLDRSNSLGCLPCQCDLRGTVNGSGVCDKTTGQCLCKN 885
Query: 239 NVEGAQC 245
NVE +C
Sbjct: 886 NVESLRC 892
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 80/249 (32%), Positives = 109/249 (43%), Gaps = 55/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
G C C+ + G C++C + + + C +C C+P GSL+ CN G+C+CK G
Sbjct: 725 GQC-QCKANVIGLTCDRCNYGFKFLNHTNPDGCISCGCDPWGSLHQFCNPFTGQCECKAG 783
Query: 81 VTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G CD C + Y +G C C C+ GSV T +CD+V GQC+ + HTE
Sbjct: 784 VRGLLCDTCIPHFYSQNSSGVCLPCNCSLNGSVPGT-SCDAVTGQCKC-------KPHTE 835
Query: 140 LRVQSRKNFDPAGNRIWDLRRCK--RDTY-PLGHGGSLNL---QCN-------------S 180
R RC RD Y L SL QC+ +
Sbjct: 836 GR------------------RCDVCRDGYHSLDRSNSLGCLPCQCDLRGTVNGSGVCDKT 877
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C CK V +C+RC + Y+ A GC+ C C+ G+V T CD V GQC C
Sbjct: 878 TGQCLCKNNVESLRCNRCSAHTYNLSSANATHGCQPCYCDHIGTVPATV-CDPVSGQCIC 936
Query: 237 KDNVEGAQC 245
G C
Sbjct: 937 LPTRYGRDC 945
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 62/229 (27%), Positives = 87/229 (37%), Gaps = 30/229 (13%)
Query: 42 RDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP--GVTGDKCDRCD--VNHYDFG 97
R YY C C+ S RC C P G C+RC N F
Sbjct: 515 RHRYYAVDEITISGRCECHGHADSCDTSVSPYRCACLPESHTHGANCERCIPLFNDKPFR 574
Query: 98 EA------GCKSCEC-NPAGSVKNTPNCDSVKGQ--------CESAQLSSRGRVHTELRV 142
C+ C+C A S + D G+ C+ ++ GR R
Sbjct: 575 PGDQIQAFNCRPCQCYGHASSCHYNSSLDPHPGEHFRGGGGVCDDCTHNTTGRNCERCRS 634
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE---GRCQCKPGVTGDKCDRCD 199
+ G +W CK G++N + E G+C+CK V+G +C++C
Sbjct: 635 LF---YREVGALLWATDVCK--ACECHSAGTINASLHCEPIGGQCKCKRHVSGRQCNQCQ 689
Query: 200 VNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y A GC++C CN AG+V+ C GQC+CK NV G C
Sbjct: 690 HGFYKLQSALADGCRACNCNTAGTVQPDITCHQDSGQCQCKANVIGLTC 738
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 22/186 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCK-PG 80
G C+ C R G +C C+ ++ ++G + C C C+ +G++ C + G+C C P
Sbjct: 932 GQCI-CLPTRYGRDCGTCKPGFFLSEAGLSECEVCECHSVGAMGQVCAAHSGQCVCAHPS 990
Query: 81 VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
+TG +CD+C + F + G C K T + VK +++S H
Sbjct: 991 LTGHRCDQCQDLFFGFNPSVGRWHHFCMTGEGKKFTVSSLGVK---LLSRVSGAWPPHHP 1047
Query: 140 LRVQSRKNFDPAG---NRIWDLRRCKRD-TYPLGHG--GSLNLQCNSE-GRCQCKPGVTG 192
L P G + ++ RC D P G G N C+ + G+C CKP VTG
Sbjct: 1048 L-------LAPQGLPSSILYTPPRCVTDRCEPCGCDPVGGFNGTCHPQTGQCLCKPFVTG 1100
Query: 193 DKCDRC 198
DKCD C
Sbjct: 1101 DKCDAC 1106
>gi|327277415|ref|XP_003223460.1| PREDICTED: laminin subunit gamma-2-like [Anolis carolinensis]
Length = 1153
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 108/220 (49%), Gaps = 61/220 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD EL RTG+G CL+C + +GP+CE+C++ +Y++ N C ACNC+
Sbjct: 31 CDCNGKSRQCMFDTELLRRTGNGYVCLNCIDNTEGPHCERCKEGFYRQWDQNGCVACNCD 90
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP-NCD 119
P GS+ +QC++ GRC CKPGV GDKCDRC N + F E GC PAG ++ + NCD
Sbjct: 91 PTGSVGVQCDNLGRCHCKPGVRGDKCDRCQHNFHSFSETGCI-----PAGQLQISHCNCD 145
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
P G G +C
Sbjct: 146 -----------------------------------------------PDGSTG----ECV 154
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECN 216
S GRC CK VTGD+C C +Y+ GC C C+
Sbjct: 155 S-GRCICKTAVTGDQCSSCKQGYYNLDAENPEGCSQCFCS 193
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 48/84 (57%), Gaps = 13/84 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GS+ +QC++ GRC CKPGV GDKCDRC N + F E GC C C+P GS
Sbjct: 93 GSVGVQCDNLGRCHCKPGVRGDKCDRCQHNFHSFSETGCIPAGQLQISHCNCDPDGS--- 149
Query: 224 TPNCDSVKGQCECKDNVEGAQCRS 247
T C V G+C CK V G QC S
Sbjct: 150 TGEC--VSGRCICKTAVTGDQCSS 171
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 54 CTACNCNPIGSLN-LQCNSEGRCQCKPGVTGDKCD 87
C ACNCNP+G++ LQC +G C CKPG G C+
Sbjct: 558 CKACNCNPVGTVEPLQCQRDGSCICKPGFEGQSCE 592
>gi|195998782|ref|XP_002109259.1| hypothetical protein TRIADDRAFT_21436 [Trichoplax adhaerens]
gi|190587383|gb|EDV27425.1| hypothetical protein TRIADDRAFT_21436 [Trichoplax adhaerens]
Length = 991
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 82/129 (63%), Gaps = 3/129 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG + C F++ LY TG GG C+ C+ G NC+KC YY + C C
Sbjct: 188 CKCNGLAESCNFNRTLYEATGSGGICVGCRNGATGINCQKCLSAYYPIDRNDPSKGCQNC 247
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
+CN +GSLN C+S GRC+CKPGV GDKCDRC +Y+F AGC SC+C+ AG+ ++ +
Sbjct: 248 SCNAVGSLNSVCDSMGRCRCKPGVAGDKCDRCQAFYYNFTSAGCSSCDCSEAGTRADSSD 307
Query: 118 CDSVKGQCE 126
CD + GQC+
Sbjct: 308 CDKITGQCQ 316
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 55/74 (74%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSLN C+S GRC+CKPGV GDKCDRC +Y+F AGC SC+C+ AG+ ++ +CD +
Sbjct: 253 GSLNSVCDSMGRCRCKPGVAGDKCDRCQAFYYNFTSAGCSSCDCSEAGTRADSSDCDKIT 312
Query: 232 GQCECKDNVEGAQC 245
GQC+CK NV G QC
Sbjct: 313 GQCQCKVNVIGKQC 326
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 97/242 (40%), Gaps = 51/242 (21%)
Query: 18 NRTGHGGHCL----------DCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPI 62
++ G GG CL +C+ P C C D YY + C C CN
Sbjct: 651 SKVGAGGECLKDDQNKIICTNCRRGYAYPQCIHCSDGYYGDPAGIRGVVTPCQQCQCNG- 709
Query: 63 GSLNLQCNSEGRC--------QCKPGVTGDKCDRCDVNHY-----DFGEAGCKSCECNPA 109
N+ N+ G C +C G C +C +N+Y CK+C C+P
Sbjct: 710 ---NIDPNAVGNCNRTTGECYKCIYNTEGFYCQQCLINYYGNALSPLKGKQCKACNCHPF 766
Query: 110 G--SVKN-TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKRD 164
G S +N T C+ + GQC S R V Q + NF +G + C +
Sbjct: 767 GTNSFRNATSPCNRITGQC-----SCRKNVINRDCSQCKANFWGINSGEGCISCKNCSKT 821
Query: 165 TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
GS+ G C CKP V G+ CDRC Y+F GC +C C+P G + NT
Sbjct: 822 -------GSVGCD-QITGDCLCKPNVGGELCDRCLHGFYNFSIEGCTACRCDPFG-IYNT 872
Query: 225 PN 226
N
Sbjct: 873 SN 874
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 89/204 (43%), Gaps = 33/204 (16%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQ----- 68
NRT G C C + +G C++C NYY + C ACNC+P G+ + +
Sbjct: 720 NRTT--GECYKCIYNTEGFYCQQCLINYYGNALSPLKGKQCKACNCHPFGTNSFRNATSP 777
Query: 69 CN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCE-CNPAGSVKNTPNCDSVKGQC 125
CN G+C C+ V C +C N + GC SC+ C+ GSV CD + G C
Sbjct: 778 CNRITGQCSCRKNVINRDCSQCKANFWGINSGEGCISCKNCSKTGSV----GCDQITGDC 833
Query: 126 ESAQLSSRGRVHTELR---VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG 182
+ V EL + NF G C+ D + + + S QC G
Sbjct: 834 LC-----KPNVGGELCDRCLHGFYNFSIEG-----CTACRCDPFGI-YNTSNGRQCFENG 882
Query: 183 RCQCK-PGVTGDKCDRCDVNHYDF 205
C C+ + G+KCD+C +NH+
Sbjct: 883 TCTCRSTTIIGEKCDQCVINHHSL 906
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 1 CNCNGFSNRCFFDKELY-NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTAC-N 58
CNC+ F F + NR G C C+ + +C +C+ N++ + C +C N
Sbjct: 761 CNCHPFGTNSFRNATSPCNRIT--GQC-SCRKNVINRDCSQCKANFWGINSGEGCISCKN 817
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
C+ GS+ G C CKP V G+ CDRC Y+F GC +C C+P G + NT N
Sbjct: 818 CSKTGSVGCD-QITGDCLCKPNVGGELCDRCLHGFYNFSIEGCTACRCDPFG-IYNTSN 874
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 100/244 (40%), Gaps = 36/244 (14%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGD-NFC----TACNCNPIGS----LNLQCNSEGRC 75
HCL+ G CE C+ YY ++ D FC + CN + +G+ L N
Sbjct: 614 HCLN---HTAGTFCENCQSGYYGEATDGGFCSRCPSVCNLSKVGAGGECLKDDQNKIICT 670
Query: 76 QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+ G +C C +Y G G C+ C+CN NC+ G+C
Sbjct: 671 NCRRGYAYPQCIHCSDGYYGDPAGIRGVVTPCQQCQCNGNIDPNAVGNCNRTTGECYKCI 730
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCKR-DTYPLGHGGSLNLQ--CN-SEGR 183
++ G + + + GN + L ++CK + +P G N CN G+
Sbjct: 731 YNTEGFYCQQCLI------NYYGNALSPLKGKQCKACNCHPFGTNSFRNATSPCNRITGQ 784
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCE-CNPAGSVKNTPNCDSVKGQCECKDNVE 241
C C+ V C +C N + GC SC+ C+ GSV CD + G C CK NV
Sbjct: 785 CSCRKNVINRDCSQCKANFWGINSGEGCISCKNCSKTGSV----GCDQITGDCLCKPNVG 840
Query: 242 GAQC 245
G C
Sbjct: 841 GELC 844
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 95/255 (37%), Gaps = 67/255 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG C++D CQ + G +C+ C+ + + S N
Sbjct: 132 CKCNGHGASCYYDNS-------NTLTCRCQHNTQGRDCQSCQSKFNDRPWAAATDSEANE 184
Query: 54 CTACNCNPIG-------SLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFG----EAGC 101
C C CN + +L S G C C+ G TG C +C +Y GC
Sbjct: 185 CIECKCNGLAESCNFNRTLYEATGSGGICVGCRNGATGINCQKCLSAYYPIDRNDPSKGC 244
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
++C CN GS+ + CDS+ G+C R AG++ RC
Sbjct: 245 QNCSCNAVGSLNSV--CDSM-GRC-------------------RCKPGVAGDK---CDRC 279
Query: 162 KRDTYPLGHGGSLNLQCNSEG-------------RCQCKPGVTGDKCDRCDVNHYDFG-- 206
+ Y G + C+ G +CQCK V G +CDRC +H+
Sbjct: 280 QAFYYNFTSAGCSSCDCSEAGTRADSSDCDKITGQCQCKVNVIGKQCDRCITSHFALSVD 339
Query: 207 -EAGCKSCECNPAGS 220
GC+ C C G+
Sbjct: 340 NPEGCQRCFCFQHGT 354
>gi|444519247|gb|ELV12685.1| Laminin subunit gamma-3 [Tupaia chinensis]
Length = 1463
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE C++N+Y+ C C+C+
Sbjct: 251 CNCSGRSEECSFDRELFRSTGHGGRCGHCRDHTAGPHCEHCQENFYRWDQHMPCQPCDCH 310
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 311 PAGSLRLQCDDSGTCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCVCNPAGSLG---TCDP 367
Query: 121 VKGQC 125
G+C
Sbjct: 368 RSGRC 372
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 312 AGSLRLQCDDSGTCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCVCNPAGSLG---TCDPR 368
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG+QC
Sbjct: 369 SGRCPCKENVEGSQC 383
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 89/202 (44%), Gaps = 23/202 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C + G +CE+C+D ++ + + C C+CNP GS++ Q G+C
Sbjct: 717 GRCLRCLHNTTGAHCERCQDGFHGSALAPGPADKCVPCSCNPEGSVSEQAPCDPVTGQCS 776
Query: 77 CKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C C YD GC+SCEC+ GS + C GQC R
Sbjct: 777 CLPHVTGRDCGHCSPGFYDLQPRQGCRSCECHALGSQEG--QCHPETGQCPC-------R 827
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+ R G R C+ PLG + QC++ C C+PG G KC
Sbjct: 828 PGVTGQACDRCQLGFFGFSAKGCRACR--CSPLGAASA---QCHANSTCVCRPGFVGYKC 882
Query: 196 DRCDVNHYDFGEAGCKSCECNP 217
DRC N + E G + EC P
Sbjct: 883 DRCGDNFF-LTEGGTRCQECPP 903
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 100/244 (40%), Gaps = 47/244 (19%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 662 CTHCPPGQRGRRCEICDDGFF---GDPLGLSGVPQPCHRCQC----SGNVDPNAVGNCDP 714
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C+RC + A C C CNP GSV CD V GQ
Sbjct: 715 LSGRCLRCLHNTTGAHCERCQDGFHGSALAPGPADKCVPCSCNPEGSVSEQAPCDPVTGQ 774
Query: 125 CE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE- 181
C ++ R H P + + C+ + + LG S QC+ E
Sbjct: 775 CSCLPHVTGRDCGHC----------SPGFYDLQPRQGCRSCECHALG---SQEGQCHPET 821
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PGVTG CDRC + + F GC++C C+P G+ + +S C C+
Sbjct: 822 GQCPCRPGVTGQACDRCQLGFFGFSAKGCRACRCSPLGAASAQCHANST---CVCRPGFV 878
Query: 242 GAQC 245
G +C
Sbjct: 879 GYKC 882
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 98/259 (37%), Gaps = 68/259 (26%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGRC-- 75
G CL C +GP+CE+C +Y G+ F C C C + + SE
Sbjct: 608 GICL-CGHHTEGPSCERCLPGFY---GNPFTGQADACQPCPCPGQSACTMLPGSEEVVCT 663
Query: 76 QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C PG G +C+ CD + G +G C C+C+ NCD + G+C
Sbjct: 664 HCPPGQRGRRCEICDDGFFGDPLGLSGVPQPCHRCQCSGNVDPNAVGNCDPLSGRCLRCL 723
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL---------QCNS 180
++ G H E RC+ D + HG +L CN
Sbjct: 724 HNTTG-AHCE--------------------RCQ-DGF---HGSALAPGPADKCVPCSCNP 758
Query: 181 EG-------------RCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPN 226
EG +C C P VTG C C YD GC+SCEC+ GS +
Sbjct: 759 EGSVSEQAPCDPVTGQCSCLPHVTGRDCGHCSPGFYDLQPRQGCRSCECHALGSQEG--Q 816
Query: 227 CDSVKGQCECKDNVEGAQC 245
C GQC C+ V G C
Sbjct: 817 CHPETGQCPCRPGVTGQAC 835
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 182 GRC-QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
GRC C+ G C+ C N Y + + C+ C+C+PAGS++ CD G C CK
Sbjct: 274 GRCGHCRDHTAGPHCEHCQENFYRWDQHMPCQPCDCHPAGSLRL--QCDD-SGTCPCKPT 330
Query: 240 VEGAQC 245
V G +C
Sbjct: 331 VTGWKC 336
>gi|363740544|ref|XP_415462.3| PREDICTED: laminin subunit gamma-3 [Gallus gallus]
Length = 1576
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+C+G S CF+D EL+ RTG GGHC +C+ + GP CE+CR N+Y+ C C+C+
Sbjct: 324 CDCSGRSEECFYDAELFRRTGRGGHCRNCRDNTAGPRCEQCRQNHYRWEQQAACQPCHCH 383
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL QC+S G C CK VTG KC+RC ++ E GC+ C C+PAGSV CD
Sbjct: 384 PAGSLRPQCDSSGTCTCKANVTGWKCERCKDGYHSLSEGGCRPCTCDPAGSVG---TCDP 440
Query: 121 VKGQC 125
G C
Sbjct: 441 NTGHC 445
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 97/200 (48%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGS-LNLQ-CNS-EGRCQ 76
G CL C + G C++CR +Y S C +CNCNP GS L L+ C+ G+C
Sbjct: 829 GRCLRCLHNTTGEQCQQCRPGFYGDALAPSPAGKCASCNCNPDGSALGLEGCDPGTGQCL 888
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V G C C +Y A GCKSCEC+P GS + C +V GQC S Q G
Sbjct: 889 CLPHVLGRTCGLCQHGYYGLQAAVGCKSCECHPVGSQDS--GCHAVTGQC-SCQPGVTG- 944
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
LR ++ G + R C+ + PLG S + QC+ C C+PG G K
Sbjct: 945 ----LRCDRCEH----GFFGFSARGCRACNCSPLG---SASAQCHENSTCLCRPGFVGYK 993
Query: 195 CDRCDVNHY-DFGEAGCKSC 213
CDRC N + D + C+ C
Sbjct: 994 CDRCQANFFPDPPSSSCQPC 1013
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL QC+S G C CK VTG KC+RC ++ E GC+ C C+PAGSV CD
Sbjct: 385 AGSLRPQCDSSGTCTCKANVTGWKCERCKDGYHSLSEGGCRPCTCDPAGSVG---TCDPN 441
Query: 231 KGQCECKDNVEGAQC 245
G C CK+ VEG C
Sbjct: 442 TGHCTCKERVEGHLC 456
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 107/251 (42%), Gaps = 52/251 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGRC-- 75
GHC C + +GP+CE+C +Y G+ F C C C P S Q S G
Sbjct: 720 GHC-RCLHNTEGPSCERCSPGFY---GNPFTGHPDDCKPCPC-PGRSPCTQLPSSGEVVC 774
Query: 76 -QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
C PG G +C+ CD + G+ G C C+C+ + NCDSV G+C
Sbjct: 775 THCPPGQRGKRCELCDDGFFGDPLGQRGPVRPCIPCQCHGNVDLNAVGNCDSVSGRCLRC 834
Query: 129 QLSSRGRVHTELRVQSRKNF-------DPAG-----NRIWDLRRCKRDTYPLGHGGSLNL 176
++ G E Q R F PAG N C D LG G
Sbjct: 835 LHNTTG----EQCQQCRPGFYGDALAPSPAGKCASCN-------CNPDGSALGLEG---- 879
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQC 234
C+ G+C C P V G C C +Y A GCKSCEC+P GS + C +V GQC
Sbjct: 880 -CDPGTGQCLCLPHVLGRTCGLCQHGYYGLQAAVGCKSCECHPVGSQDS--GCHAVTGQC 936
Query: 235 ECKDNVEGAQC 245
C+ V G +C
Sbjct: 937 SCQPGVTGLRC 947
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-Q 76
C C + G CE C D ++ Q+ C C C+ LN N GRC +
Sbjct: 774 CTHCPPGQRGKRCELCDDGFFGDPLGQRGPVRPCIPCQCHGNVDLNAVGNCDSVSGRCLR 833
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C TG++C +C Y A C SC CNP GS CD GQC
Sbjct: 834 CLHNTTGEQCQQCRPGFYGDALAPSPAGKCASCNCNPDGSALGLEGCDPGTGQCLCLP-H 892
Query: 132 SRGRV-----HTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRC 184
GR H +Q+ CK + +P+G S + C++ G+C
Sbjct: 893 VLGRTCGLCQHGYYGLQAAVG-------------CKSCECHPVG---SQDSGCHAVTGQC 936
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
C+PGVTG +CDRC+ + F GC++C C+P GS
Sbjct: 937 SCQPGVTGLRCDRCEHGFFGFSARGCRACNCSPLGSA 973
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 186 CKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
C+ G +C++C NHY + +A C+ C C+PAGS++ P CDS G C CK NV G +
Sbjct: 352 CRDNTAGPRCEQCRQNHYRWEQQAACQPCHCHPAGSLR--PQCDS-SGTCTCKANVTGWK 408
Query: 245 C 245
C
Sbjct: 409 C 409
>gi|403256752|ref|XP_003921016.1| PREDICTED: laminin subunit gamma-3 [Saimiri boliviensis
boliviensis]
Length = 1421
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y+ C C+C+
Sbjct: 307 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYRWDPRMPCQPCDCH 366
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 367 SAGSLHLQCDDTGTCACKPSVTGWKCDRCLPGFHSISEGGCRPCTCNPAGSLD---TCDP 423
Query: 121 VKGQC 125
G+C
Sbjct: 424 RSGRC 428
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 368 AGSLHLQCDDTGTCACKPSVTGWKCDRCLPGFHSISEGGCRPCTCNPAGSLD---TCDPR 424
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 425 SGRCPCKENVEGNLC 439
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 15/104 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCT--------------ACNCNPIGSLNLQC 69
GHCL C + G +CE C++ +Y + T AC C+P+GS QC
Sbjct: 736 GHCLRCLHNTTGDHCEHCQEGFYGSALSPRPTDKCTREYLPPDTGVACKCHPLGSQEDQC 795
Query: 70 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
+ + G+C C+PGVTG CDRC + + F GC++C C+P G+
Sbjct: 796 HPKTGQCTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA 839
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 112/268 (41%), Gaps = 46/268 (17%)
Query: 12 FDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CT 55
F + L N TG G C+ C +GP+CE+C +Y G+ F C
Sbjct: 605 FQRLLANLTGLRLRVSPGPSPAGICV-CGHHTEGPSCERCLPGFY---GNPFAGQADDCR 660
Query: 56 ACNCNPIGSLNLQCNSEGRC---QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCEC 106
C C P GS G C PG G +C+ CD + G +G C C+C
Sbjct: 661 PCPC-PGGSACTTIPESGEVVCTHCPPGQRGRRCEVCDDGFFGDPLGLSGAPQPCHRCQC 719
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ NCD + G C ++ G H E ++ F + +C R+
Sbjct: 720 SGNVDPNAVGNCDPLSGHCLRCLHNTTGD-HCE---HCQEGFYGSALSPRPTDKCTREYL 775
Query: 167 PLGHG--------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
P G GS QC+ + G+C C+PGVTG CDRC + + F GC++C C+P
Sbjct: 776 PPDTGVACKCHPLGSQEDQCHPKTGQCTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSP 835
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ + C G C C+ EG +C
Sbjct: 836 LGAA--SAQCRE-NGTCVCRPGFEGYKC 860
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C+ ++ S C AC C+P+G+ + QC G C C+PG G KCDR
Sbjct: 804 CRPGVTGQACDRCQLGFFGFSIKG-CRACRCSPLGAASAQCRENGTCVCRPGFEGYKCDR 862
Query: 89 C 89
C
Sbjct: 863 C 863
>gi|296191036|ref|XP_002743458.1| PREDICTED: laminin subunit gamma-3 [Callithrix jacchus]
Length = 1516
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C+
Sbjct: 329 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPQMPCQPCDCH 388
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 389 LAGSLHLQCDDTGTCACKPSVTGWKCDRCLPGFHSISEGGCRPCTCNPAGSLD---TCDP 445
Query: 121 VKGQC 125
G+C
Sbjct: 446 RSGRC 450
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 390 AGSLHLQCDDTGTCACKPSVTGWKCDRCLPGFHSISEGGCRPCTCNPAGSLD---TCDPR 446
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 447 SGRCPCKENVEGNLC 461
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 34/194 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
GHCL C + G +CE C++ +Y + CT C+C+P GS++ Q G+C
Sbjct: 831 GHCLRCLHNTTGYHCEHCQEGFYGNALAPRPTDKCTPCSCHPQGSVSEQTPCDPVTGQCS 890
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE-----SAQL 130
C P VTG C RC +D GC+SC+C+P GS ++ C GQC + Q
Sbjct: 891 CLPHVTGRDCSRCHPGFFDLQAGRGCRSCKCHPLGSQED--QCHPKTGQCTCRPGVTGQA 948
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPG 189
R ++ G + ++ C+ PLG + + QC G C C+PG
Sbjct: 949 CDRCQL---------------GFFSFSIKGCRACRCSPLG---ATSAQCRENGTCVCRPG 990
Query: 190 VTGDKCDRCDVNHY 203
G KCDRC N +
Sbjct: 991 FEGYKCDRCHDNFF 1004
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 102/245 (41%), Gaps = 49/245 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 776 CTHCPPGQRGRRCEVCDDGFF---GDPLGLSGPPQPCHRCQC----SGNVDPNAVGNCDP 828
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C+ C Y A C C C+P GSV CD V GQ
Sbjct: 829 VSGHCLRCLHNTTGYHCEHCQEGFYGNALAPRPTDKCTPCSCHPQGSVSEQTPCDPVTGQ 888
Query: 125 CE-SAQLSSR--GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE 181
C ++ R R H FD R R CK +PLG S QC+ +
Sbjct: 889 CSCLPHVTGRDCSRCHPGF-------FDLQAGR--GCRSCK--CHPLG---SQEDQCHPK 934
Query: 182 -GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C C+PGVTG CDRC + + F GC++C C+P G+ + C G C C+
Sbjct: 935 TGQCTCRPGVTGQACDRCQLGFFSFSIKGCRACRCSPLGA--TSAQCRE-NGTCVCRPGF 991
Query: 241 EGAQC 245
EG +C
Sbjct: 992 EGYKC 996
>gi|426363343|ref|XP_004048800.1| PREDICTED: laminin subunit gamma-3 [Gorilla gorilla gorilla]
Length = 1575
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C+
Sbjct: 327 CNCSGRSKECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCH 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCTCKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCTCKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 774 CTHCPPGQRGRRCEVCDDGFF---GDPLGLSGHPQSCHQCQC----SGNVDPNAVGNCDP 826
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TGD C+ C Y A C C C+P GSV CD V GQ
Sbjct: 827 LSGHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQ 886
Query: 125 CESAQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE 181
C H R SR FD R R CK +PLG S QC+ +
Sbjct: 887 CSCLP-------HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPK 932
Query: 182 -GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C C+PGVTG CDRC + + F GC +C C+P G+ + C G C C+
Sbjct: 933 TGQCTCRPGVTGQACDRCQLGFFGFSIKGCWACRCSPLGAA--SAQCHE-NGTCVCRPGF 989
Query: 241 EGAQC 245
EG +C
Sbjct: 990 EGYKC 994
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 89/189 (47%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 887
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC + R
Sbjct: 888 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQC-----TCRP 940
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
V + + + F G I C+ PLG + QC+ G C C+PG G K
Sbjct: 941 GVTGQACDRCQLGF--FGFSIKGCWACR--CSPLGAASA---QCHENGTCVCRPGFEGYK 993
Query: 195 CDRCDVNHY 203
C+RC N +
Sbjct: 994 CNRCHDNFF 1002
>gi|397503644|ref|XP_003822429.1| PREDICTED: laminin subunit gamma-3 isoform 2 [Pan paniscus]
Length = 1568
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C+
Sbjct: 306 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCH 365
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 366 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 422
Query: 121 VKGQC 125
G+C
Sbjct: 423 RSGRC 427
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 367 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 423
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 424 SGRCPCKENVEGNLC 438
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 101/242 (41%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ F C C C S N+ N+ G C
Sbjct: 753 CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQC----SGNVDPNAMGNCDPLSG 808
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C TGD C+ C Y A C C C+P GSV CD V GQC
Sbjct: 809 HCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSC 868
Query: 128 AQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
H R SR FD R R CK +PLG S QC+ + G+
Sbjct: 869 LP-------HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQ 914
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+PGVTG CDRC + + F GC++C C+P G+ + C G C C+ EG
Sbjct: 915 CTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCVCRPGFEGY 971
Query: 244 QC 245
+C
Sbjct: 972 KC 973
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 808 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 866
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC + R
Sbjct: 867 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQC-----TCRP 919
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
V + + + F G I R C+ PLG + QC+ G C C+PG G K
Sbjct: 920 GVTGQACDRCQLGF--FGFSIKGCRACR--CSPLGAASA---QCHENGTCVCRPGFEGYK 972
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 973 CDRCHDNFF 981
>gi|397503642|ref|XP_003822428.1| PREDICTED: laminin subunit gamma-3 isoform 1 [Pan paniscus]
Length = 1554
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C+
Sbjct: 306 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCH 365
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 366 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 422
Query: 121 VKGQC 125
G+C
Sbjct: 423 RSGRC 427
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 367 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 423
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 424 SGRCPCKENVEGNLC 438
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 101/242 (41%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ F C C C S N+ N+ G C
Sbjct: 753 CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQC----SGNVDPNAMGNCDPLSG 808
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C TGD C+ C Y A C C C+P GSV CD V GQC
Sbjct: 809 HCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSC 868
Query: 128 AQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
H R SR FD R R CK +PLG S QC+ + G+
Sbjct: 869 LP-------HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQ 914
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+PGVTG CDRC + + F GC++C C+P G+ + C G C C+ EG
Sbjct: 915 CTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCVCRPGFEGY 971
Query: 244 QC 245
+C
Sbjct: 972 KC 973
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 808 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 866
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC + R
Sbjct: 867 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQC-----TCRP 919
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
V + + + F G I R C+ PLG + QC+ G C C+PG G K
Sbjct: 920 GVTGQACDRCQLGF--FGFSIKGCRACR--CSPLGAASA---QCHENGTCVCRPGFEGYK 972
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 973 CDRCHDNFF 981
>gi|157822365|ref|NP_001101300.1| laminin subunit gamma-3 precursor [Rattus norvegicus]
gi|149039043|gb|EDL93263.1| laminin gamma 3 (predicted), isoform CRA_b [Rattus norvegicus]
Length = 1580
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+ELY TGHGGHC C+ GP+CE C NYY+ C C+C+
Sbjct: 336 CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTAGPHCEHCEKNYYRWDPKTPCQPCDCH 395
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC++ G C CK VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 396 PAGSLSLQCDNSGTCPCKLTVTGWKCDRCLPGFHSLSEGGCRPCTCNVAGSLG---TCDP 452
Query: 121 VKGQC 125
G C
Sbjct: 453 RSGNC 457
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 96/201 (47%), Gaps = 24/201 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQ-CN-SEGR 74
H G CL C + G +CE C++ +Y + D C C+C+P GS + + CN + G+
Sbjct: 839 HSGRCLRCLHNTTGAHCEHCQEGFYGSALATRPADK-CAPCSCDPRGSSSQKTCNPATGQ 897
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C P VTG C RC YD GC+SC+C+P GS++N C GQC
Sbjct: 898 CACLPYVTGRDCSRCSPGFYDLQPGRGCQSCKCHPVGSLEN--KCHPKTGQCPC------ 949
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
R + R G I R C+ PLG + + QC+ C C+PG G
Sbjct: 950 -RPGVTGQACDRCQLGFFGFSIKGCRDCR--CSPLG---AASPQCHENSTCVCRPGFVGY 1003
Query: 194 KCDRCDVNHYDF-GEAGCKSC 213
KCDRC N + G+ GC+ C
Sbjct: 1004 KCDRCQDNFFLVDGDTGCQEC 1024
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC++ G C CK VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 397 AGSLSLQCDNSGTCPCKLTVTGWKCDRCLPGFHSLSEGGCRPCTCNVAGSLG---TCDPR 453
Query: 231 KGQCECKDNVEGAQC 245
G C CK+NVEG C
Sbjct: 454 SGNCPCKENVEGGLC 468
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 95/249 (38%), Gaps = 58/249 (23%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCN---SEGR 74
C C + G CE C D ++ GD C C C+ LN N GR
Sbjct: 786 CTHCPPGQRGRRCESCEDGFF---GDPLGLSGAPQPCRRCQCSRNVDLNAVGNCDPHSGR 842
Query: 75 C-QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
C +C TG C+ C Y A C C C+P GS + C+ GQC
Sbjct: 843 CLRCLHNTTGAHCEHCQEGFYGSALATRPADKCAPCSCDPRGS-SSQKTCNPATGQCACL 901
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQ 177
+ GR D RC Y L G GSL +
Sbjct: 902 PYVT-GR---------------------DCSRCSPGFYDLQPGRGCQSCKCHPVGSLENK 939
Query: 178 CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
C+ + G+C C+PGVTG CDRC + + F GC+ C C+P G+ +P C C C
Sbjct: 940 CHPKTGQCPCRPGVTGQACDRCQLGFFGFSIKGCRDCRCSPLGAA--SPQCHE-NSTCVC 996
Query: 237 KDNVEGAQC 245
+ G +C
Sbjct: 997 RPGFVGYKC 1005
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGR--- 74
G CL C +GP+CE+C +Y G+ F C C C G E R
Sbjct: 732 GICL-CGHHTEGPSCERCMPGFY---GNAFSGHADDCQPCPCP--GQSACTTIPESRDVV 785
Query: 75 -CQCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCES 127
C PG G +C+ C+ + G +G C+ C+C+ + NCD G+C
Sbjct: 786 CTHCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSRNVDLNAVGNCDPHSGRCLR 845
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR---DTYPLGHGGSLNLQCN-SEGR 183
++ G H E ++ F + +C D G S CN + G+
Sbjct: 846 CLHNTTG-AHCE---HCQEGFYGSALATRPADKCAPCSCDP----RGSSSQKTCNPATGQ 897
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C P VTG C RC YD GC+SC+C+P GS++N C GQC C+ V G
Sbjct: 898 CACLPYVTGRDCSRCSPGFYDLQPGRGCQSCKCHPVGSLEN--KCHPKTGQCPCRPGVTG 955
Query: 243 AQC 245
C
Sbjct: 956 QAC 958
>gi|348570392|ref|XP_003470981.1| PREDICTED: laminin subunit gamma-3-like [Cavia porcellus]
Length = 1786
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD EL+ TGHGGHC C+ GP+CE+C +N+Y+ C C+C+
Sbjct: 531 CNCSGRSENCTFDLELFRSTGHGGHCHGCRDHTAGPHCERCEENFYRWDARAPCQPCDCH 590
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC++ G C CKP VTG KCDRC + E GC+ C C+ AGS+ CD
Sbjct: 591 PAGSLRLQCDASGSCPCKPLVTGWKCDRCLPGFHSLSEGGCRPCACSAAGSLG---TCDP 647
Query: 121 VKGQC 125
G C
Sbjct: 648 RSGSC 652
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLN--LQCNS-EGRC 75
G CL C + G CE+CR+ +Y + D CT C+C+P+GS++ + C+S G+C
Sbjct: 1035 GRCLRCLHNTTGTYCERCREGFYGSALAPRPADK-CTPCSCSPVGSVSEQMSCDSVTGQC 1093
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VTG C C Y+ GC+SC C+P GS +N C GQC
Sbjct: 1094 PCLPHVTGRDCSLCSPGFYNLHPGRGCRSCMCHPLGSQEN--QCHPETGQCHC------- 1144
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R R G I R C+ PLG + + QC+ C C+PG G K
Sbjct: 1145 RAGVMGLACDRCQLGFFGFSIKGCRACR--CSPLG---ATSAQCHENSTCVCRPGFVGYK 1199
Query: 195 CDRCDVNHYDFGEAGCKSCECNP 217
CDRC N + E G EC P
Sbjct: 1200 CDRCQDNFFP-AEGGAHCQECPP 1221
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL LQC++ G C CKP VTG KCDRC + E GC+ C C+ AGS+ CD
Sbjct: 592 AGSLRLQCDASGSCPCKPLVTGWKCDRCLPGFHSLSEGGCRPCACSAAGSLG---TCDPR 648
Query: 231 KGQCECKDNVEGAQC 245
G C CK VEG+ C
Sbjct: 649 SGSCPCKQKVEGSLC 663
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C CN N+ N+ G C
Sbjct: 980 CTHCPPGQRGRRCESCDDGFF---GDPLGLSGAPQPCRRCQCNG----NMDPNAIGNCDP 1032
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C+RC Y A C C C+P GSV +CDSV GQ
Sbjct: 1033 LSGRCLRCLHNTTGTYCERCREGFYGSALAPRPADKCTPCSCSPVGSVSEQMSCDSVTGQ 1092
Query: 125 CE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE- 181
C ++ R L N P R C+ +PLG S QC+ E
Sbjct: 1093 CPCLPHVTGR---DCSLCSPGFYNLHPG-------RGCRSCMCHPLG---SQENQCHPET 1139
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
G+C C+ GV G CDRC + + F GC++C C+P G+
Sbjct: 1140 GQCHCRAGVMGLACDRCQLGFFGFSIKGCRACRCSPLGAT 1179
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 91/235 (38%), Gaps = 41/235 (17%)
Query: 35 GPNCEKCRDNYYQK--SGDNF--CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCD 90
G CE C Y ++ G + C C CN G+ + S G C C G C+RC
Sbjct: 887 GQFCEACAPGYKREMPQGGPYVNCVPCTCNQHGTCD---PSTGTCLCGHHTEGPSCERCL 943
Query: 91 VNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQS- 144
Y +G CK C C + P V C Q RGR R +S
Sbjct: 944 TGFYGNPSSGQADDCKPCPCPGQSACTAIPESGEVVCTHCPPGQ---RGR-----RCESC 995
Query: 145 RKNF--DPAG--NRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKC 195
F DP G RRC+ D +G+ L+ GRC +C TG C
Sbjct: 996 DDGFFGDPLGLSGAPQPCRRCQCNGNMDPNAIGNCDPLS------GRCLRCLHNTTGTYC 1049
Query: 196 DRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+RC Y A C C C+P GSV +CDSV GQC C +V G C
Sbjct: 1050 ERCREGFYGSALAPRPADKCTPCSCSPVGSVSEQMSCDSVTGQCPCLPHVTGRDC 1104
>gi|62087354|dbj|BAD92124.1| laminin, gamma 3 precursor variant [Homo sapiens]
Length = 1379
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C
Sbjct: 131 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCQ 190
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 191 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 247
Query: 121 VKGQC 125
G+C
Sbjct: 248 RSGRC 252
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 192 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 248
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 249 SGRCPCKENVEGNLC 263
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 101/242 (41%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ F C C C S N+ N+ G C
Sbjct: 578 CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQC----SGNVDPNAVGNCDPLSG 633
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C TGD C+ C Y A C C C+P GSV CD V GQC
Sbjct: 634 HCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSC 693
Query: 128 AQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
H R SR FD R R CK +PLG S QC+ + G+
Sbjct: 694 LP-------HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQ 739
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+PGVTG CDRC + + F GC++C C+P G+ + C G C C+ EG
Sbjct: 740 CTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCVCRPGFEGY 796
Query: 244 QC 245
+C
Sbjct: 797 KC 798
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 633 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 691
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC + R
Sbjct: 692 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQC-----TCRP 744
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
V + + + F G I R C+ PLG + QC+ G C C+PG G K
Sbjct: 745 GVTGQACDRCQLGF--FGFSIKGCRACR--CSPLGAASA---QCHENGTCVCRPGFEGYK 797
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 798 CDRCHDNFF 806
>gi|119608360|gb|EAW87954.1| laminin, gamma 3, isoform CRA_a [Homo sapiens]
Length = 1547
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCQ 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 101/242 (41%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ F C C C S N+ N+ G C
Sbjct: 774 CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQC----SGNVDPNAVGNCDPLSG 829
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C TGD C+ C Y A C C C+P GSV CD V GQC
Sbjct: 830 HCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSC 889
Query: 128 AQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
H R SR FD R R CK +PLG S QC+ + G+
Sbjct: 890 LP-------HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQ 935
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+PGVTG CDRC + + F GC++C C+P G+ + C G C C+ EG
Sbjct: 936 CTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCVCRPGFEGY 992
Query: 244 QC 245
+C
Sbjct: 993 KC 994
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 86/189 (45%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 887
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC
Sbjct: 888 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQCTC------- 938
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R + R G I R C+ PLG + QC+ G C C+PG G K
Sbjct: 939 RPGVTGQACDRCQLGFFGFSIKGCRACR--CSPLGAASA---QCHENGTCVCRPGFEGYK 993
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 994 CDRCHDNFF 1002
>gi|110611156|ref|NP_006050.3| laminin subunit gamma-3 precursor [Homo sapiens]
gi|308153586|sp|Q9Y6N6.3|LAMC3_HUMAN RecName: Full=Laminin subunit gamma-3; AltName: Full=Laminin-12
subunit gamma; AltName: Full=Laminin-14 subunit gamma;
AltName: Full=Laminin-15 subunit gamma; Flags: Precursor
gi|162317634|gb|AAI56275.1| Laminin, gamma 3 [synthetic construct]
Length = 1575
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCQ 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 101/242 (41%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ F C C C S N+ N+ G C
Sbjct: 774 CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQC----SGNVDPNAVGNCDPLSG 829
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C TGD C+ C Y A C C C+P GSV CD V GQC
Sbjct: 830 HCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSC 889
Query: 128 AQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
H R SR FD R R CK +PLG S QC+ + G+
Sbjct: 890 LP-------HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQ 935
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+PGVTG CDRC + + F GC++C C+P G+ + C G C C+ EG
Sbjct: 936 CTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCVCRPGFEGY 992
Query: 244 QC 245
+C
Sbjct: 993 KC 994
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 887
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC + R
Sbjct: 888 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQC-----TCRP 940
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
V + + + F G I R C+ PLG + QC+ G C C+PG G K
Sbjct: 941 GVTGQACDRCQLGF--FGFSIKGCRACR--CSPLGAASA---QCHENGTCVCRPGFEGYK 993
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 994 CDRCHDNFF 1002
>gi|119608363|gb|EAW87957.1| laminin, gamma 3, isoform CRA_d [Homo sapiens]
Length = 1587
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCQ 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 101/242 (41%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ F C C C S N+ N+ G C
Sbjct: 774 CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQC----SGNVDPNAVGNCDPLSG 829
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C TGD C+ C Y A C C C+P GSV CD V GQC
Sbjct: 830 HCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSC 889
Query: 128 AQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
H R SR FD R R CK +PLG S QC+ + G+
Sbjct: 890 LP-------HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQ 935
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+PGVTG CDRC + + F GC++C C+P G+ + C G C C+ EG
Sbjct: 936 CTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCVCRPGFEGY 992
Query: 244 QC 245
+C
Sbjct: 993 KC 994
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 86/189 (45%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 887
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC
Sbjct: 888 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQCTC------- 938
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R + R G I R C+ PLG + QC+ G C C+PG G K
Sbjct: 939 RPGVTGQACDRCQLGFFGFSIKGCRACR--CSPLGAASA---QCHENGTCVCRPGFEGYK 993
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 994 CDRCHDNFF 1002
>gi|360045543|emb|CCD83091.1| putative laminin gamma-1 chain [Schistosoma mansoni]
Length = 1259
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 82/128 (64%), Gaps = 3/128 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNC 59
CNCNG ++ C FD ELY+RTG G C+DC + +G NCE+C+ YY C C+C
Sbjct: 340 CNCNGNAHLCEFDPELYSRTGSGSRCIDCGNNTEGLNCERCKSGYYPNPKQPTTCLPCSC 399
Query: 60 NPIGSLN--LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
+P+G+++ +CN++G+CQCKPG+ G CD C +H+ F GC C CN GS +N P
Sbjct: 400 DPVGTIDGQTECNAQGQCQCKPGIGGKSCDHCLEDHFGFNAGGCLPCNCNEGGSYENRPA 459
Query: 118 CDSVKGQC 125
CDS GQC
Sbjct: 460 CDSQTGQC 467
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 45/69 (65%)
Query: 177 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+CN++G+CQCKPG+ G CD C +H+ F GC C CN GS +N P CDS GQC C
Sbjct: 410 ECNAQGQCQCKPGIGGKSCDHCLEDHFGFNAGGCLPCNCNEGGSYENRPACDSQTGQCIC 469
Query: 237 KDNVEGAQC 245
K NV G QC
Sbjct: 470 KQNVAGKQC 478
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 119/275 (43%), Gaps = 49/275 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN + RC D E G C +CQ + G C++C D YY + + ++ C
Sbjct: 716 CTCNNHATRC--DPE-------SGQC-ECQDNTGGLFCDRCADGYYGDAFASVNSSDACK 765
Query: 61 PIGSLNLQCNSEGRCQ---------------CKPGVTGDKCDRCDVNHYDFGEAG--CKS 103
P C SE +C+ C +G +C+RC N Y G CK
Sbjct: 766 PC-----PCPSEAKCEQVYWPDRSIKVVCKDCPDNRSGIRCERCAENFYGDPAKGIPCKP 820
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL----- 158
C+C+ + NCD G+C + G+ + R+N P I DL
Sbjct: 821 CDCSNNVDPREFGNCDGKTGECLKCLFGTSGKHCEQCLSGYRRNLKPIN--ISDLSDLIP 878
Query: 159 -RRCKR-DTYPLGHGGSLNLQ----CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GC 210
R C + P+G + Q CN E G+C C PGV G CD+C Y F GC
Sbjct: 879 ARGCSPCECNPIGTLANYGSQGIGVCNPETGQCPCNPGVGGVNCDKCFDGFYGFHTGQGC 938
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C+CN G+V+ + CD GQCEC+ NV G QC
Sbjct: 939 QPCDCNSVGAVQES--CDDRTGQCECRPNVIGRQC 971
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 14 KELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY--------YQKSGDNF----CTACNCNP 61
+E N G G CL C G +CE+C Y D C+ C CNP
Sbjct: 830 REFGNCDGKTGECLKCLFGTSGKHCEQCLSGYRRNLKPINISDLSDLIPARGCSPCECNP 889
Query: 62 IGSLNLQ-------CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 112
IG+L CN E G+C C PGV G CD+C Y F GC+ C+CN G+V
Sbjct: 890 IGTLANYGSQGIGVCNPETGQCPCNPGVGGVNCDKCFDGFYGFHTGQGCQPCDCNSVGAV 949
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
+ + CD GQCE + + GR + R G + C Y G
Sbjct: 950 QES--CDDRTGQCE-CRPNVIGRQCDQCRPAYFNMTTSVG-----CQSCNCHIY-----G 996
Query: 173 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
+ + QCN G+C CKP G C++C NHY+ +AGC C
Sbjct: 997 AESSQCNKNGQCICKPFAVGVNCEQCQENHYNL-QAGCLPC 1036
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 102/261 (39%), Gaps = 69/261 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNLQCNSEGRC--------Q 76
C DC +R G CE+C +N+Y C C+C S N+ G C +
Sbjct: 789 CKDCPDNRSGIRCERCAENFYGDPAKGIPCKPCDC----SNNVDPREFGNCDGKTGECLK 844
Query: 77 CKPGVTGDKCDRC---------DVNHYDFGEA----GCKSCECNPAGSVKNTPN-----C 118
C G +G C++C +N D + GC CECNP G++ N + C
Sbjct: 845 CLFGTSGKHCEQCLSGYRRNLKPINISDLSDLIPARGCSPCECNPIGTLANYGSQGIGVC 904
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG------- 171
+ GQC +P + + +C Y G
Sbjct: 905 NPETGQCPC---------------------NPGVGGV-NCDKCFDGFYGFHTGQGCQPCD 942
Query: 172 ----GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 225
G++ C+ G+C+C+P V G +CD+C +++ GC+SC C+ G+ +
Sbjct: 943 CNSVGAVQESCDDRTGQCECRPNVIGRQCDQCRPAYFNMTTSVGCQSCNCHIYGA--ESS 1000
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C+ GQC CK G C
Sbjct: 1001 QCNK-NGQCICKPFAVGVNCE 1020
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 83/221 (37%), Gaps = 60/221 (27%)
Query: 35 GPNCEKCRDNYYQKSGD-------NFCTACNCNPIGSLNL---------QCNSEGRC-QC 77
G NCE+C+ Y+ + N C ACNCN G+ +L + S RC C
Sbjct: 311 GDNCEQCQSGYHDRPWQPATPQNANPCIACNCN--GNAHLCEFDPELYSRTGSGSRCIDC 368
Query: 78 KPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
G C+RC +Y + C C C+P G++ C++ +GQC+
Sbjct: 369 GNNTEGLNCERCKSGYYPNPKQPTTCLPCSCDPVGTIDGQTECNA-QGQCQCK------- 420
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-------------EG 182
G + D C D + GG L CN G
Sbjct: 421 -------------PGIGGKSCD--HCLEDHFGFNAGGCLPCNCNEGGSYENRPACDSQTG 465
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGS 220
+C CK V G +CD+C + HY GCK C C+ S
Sbjct: 466 QCICKQNVAGKQCDKCKIGHYGLMSNDPLGCKPCLCSLHSS 506
>gi|5001398|gb|AAD36991.1|AF041835_1 laminin gamma 3 chain precursor [Homo sapiens]
Length = 1587
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCQ 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 887
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC
Sbjct: 888 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQCTC------- 938
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R + R G+ I R C+ PLG + QC+ G C C+PG G K
Sbjct: 939 RPGVTGQACDRCQLGFFGSSIKGCRACR--CSPLGAASA---QCHYNGTCVCRPGFEGYK 993
Query: 195 CDRCDVNHYDF 205
CDRC HY+F
Sbjct: 994 CDRC---HYNF 1001
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 100/242 (41%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ F C C C S N+ N+ G C
Sbjct: 774 CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQC----SGNVDPNAVGNCDPLSG 829
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C TGD C+ C Y A C C C+P GSV CD V GQC
Sbjct: 830 HCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSC 889
Query: 128 AQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
H R SR FD R R CK +PLG S QC+ + G+
Sbjct: 890 LP-------HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQ 935
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+PGVTG CDRC + + GC++C C+P G+ + C G C C+ EG
Sbjct: 936 CTCRPGVTGQACDRCQLGFFGSSIKGCRACRCSPLGAA--SAQCH-YNGTCVCRPGFEGY 992
Query: 244 QC 245
+C
Sbjct: 993 KC 994
>gi|256085389|ref|XP_002578904.1| laminin gamma-1 chain [Schistosoma mansoni]
Length = 1259
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 82/128 (64%), Gaps = 3/128 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNC 59
CNCNG ++ C FD ELY+RTG G C+DC + +G NCE+C+ YY C C+C
Sbjct: 340 CNCNGNAHLCEFDPELYSRTGSGSRCIDCGNNTEGLNCERCKSGYYPNPKQPTTCLPCSC 399
Query: 60 NPIGSLN--LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
+P+G+++ +CN++G+CQCKPG+ G CD C +H+ F GC C CN GS +N P
Sbjct: 400 DPVGTIDGQTECNAQGQCQCKPGIGGKSCDHCLEDHFGFNAGGCLPCNCNEGGSYENRPA 459
Query: 118 CDSVKGQC 125
CDS GQC
Sbjct: 460 CDSQTGQC 467
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 45/69 (65%)
Query: 177 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+CN++G+CQCKPG+ G CD C +H+ F GC C CN GS +N P CDS GQC C
Sbjct: 410 ECNAQGQCQCKPGIGGKSCDHCLEDHFGFNAGGCLPCNCNEGGSYENRPACDSQTGQCIC 469
Query: 237 KDNVEGAQC 245
K NV G QC
Sbjct: 470 KQNVAGKQC 478
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 120/275 (43%), Gaps = 49/275 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN + RC D E G C +CQ + G C++C D YY + + ++ C
Sbjct: 716 CTCNNHATRC--DPE-------SGQC-ECQDNTGGLFCDRCADGYYGDAFASVNSSDACK 765
Query: 61 PIGSLNLQCNSEGRCQ---------------CKPGVTGDKCDRCDVNHYDFGEAG--CKS 103
P C SE +C+ C +G +C+RC N Y G CK
Sbjct: 766 PC-----PCPSEAKCEQVYWPDRSIKVVCKDCPDNRSGIRCERCAENFYGDPAKGIPCKP 820
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL----- 158
C+C+ + NCD G+C + G+ + R+NF P I DL
Sbjct: 821 CDCSNNVDPREFGNCDGKTGECLKCLFGTSGKHCEQCLSGYRRNFKPIN--ISDLSDLIP 878
Query: 159 -RRCKR-DTYPLGHGGSLNLQ----CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GC 210
R C + P+G + Q CN E G+C C PGV G CD+C Y F GC
Sbjct: 879 ARGCSPCECNPIGTLANYGSQGIGVCNPETGQCPCNPGVGGVNCDKCFDGFYGFHTGQGC 938
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C+CN G+V+ + CD GQCEC+ NV G QC
Sbjct: 939 QPCDCNSVGAVQES--CDDRTGQCECRPNVIGRQC 971
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 14 KELYNRTGHGGHCLDCQGDRDGPNCEKC----RDNYYQKSGDNF--------CTACNCNP 61
+E N G G CL C G +CE+C R N+ + + C+ C CNP
Sbjct: 830 REFGNCDGKTGECLKCLFGTSGKHCEQCLSGYRRNFKPINISDLSDLIPARGCSPCECNP 889
Query: 62 IGSLNLQ-------CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 112
IG+L CN E G+C C PGV G CD+C Y F GC+ C+CN G+V
Sbjct: 890 IGTLANYGSQGIGVCNPETGQCPCNPGVGGVNCDKCFDGFYGFHTGQGCQPCDCNSVGAV 949
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
+ + CD GQCE + + GR + R G + C Y G
Sbjct: 950 QES--CDDRTGQCE-CRPNVIGRQCDQCRPAYFNMTTSVG-----CQSCNCHIY-----G 996
Query: 173 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
+ + QCN G+C CKP G C++C NHY+ +AGC C
Sbjct: 997 AESSQCNKNGQCICKPFAVGVNCEQCQENHYNL-QAGCLPC 1036
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 102/261 (39%), Gaps = 69/261 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNLQCNSEGRC--------Q 76
C DC +R G CE+C +N+Y C C+C S N+ G C +
Sbjct: 789 CKDCPDNRSGIRCERCAENFYGDPAKGIPCKPCDC----SNNVDPREFGNCDGKTGECLK 844
Query: 77 CKPGVTGDKCDRC---------DVNHYDFGEA----GCKSCECNPAGSVKNTPN-----C 118
C G +G C++C +N D + GC CECNP G++ N + C
Sbjct: 845 CLFGTSGKHCEQCLSGYRRNFKPINISDLSDLIPARGCSPCECNPIGTLANYGSQGIGVC 904
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG------- 171
+ GQC +P + + +C Y G
Sbjct: 905 NPETGQCPC---------------------NPGVGGV-NCDKCFDGFYGFHTGQGCQPCD 942
Query: 172 ----GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 225
G++ C+ G+C+C+P V G +CD+C +++ GC+SC C+ G+ +
Sbjct: 943 CNSVGAVQESCDDRTGQCECRPNVIGRQCDQCRPAYFNMTTSVGCQSCNCHIYGA--ESS 1000
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C+ GQC CK G C
Sbjct: 1001 QCNK-NGQCICKPFAVGVNCE 1020
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 83/222 (37%), Gaps = 62/222 (27%)
Query: 35 GPNCEKCRDNYYQKSGD-------NFCTACNCNPIGSLNL---------QCNSEGRC-QC 77
G NCE+C+ Y+ + N C ACNCN G+ +L + S RC C
Sbjct: 311 GDNCEQCQSGYHDRPWQPATPQNANPCIACNCN--GNAHLCEFDPELYSRTGSGSRCIDC 368
Query: 78 KPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRG 134
G C+RC +Y + C C C+P G++ C++ +GQC+ + +
Sbjct: 369 GNNTEGLNCERCKSGYYPNPKQPTTCLPCSCDPVGTIDGQTECNA-QGQCQCKPGIGGKS 427
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-------------E 181
H C D + GG L CN
Sbjct: 428 CDH-----------------------CLEDHFGFNAGGCLPCNCNEGGSYENRPACDSQT 464
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGS 220
G+C CK V G +CD+C + HY GCK C C+ S
Sbjct: 465 GQCICKQNVAGKQCDKCKIGHYGLMSNDPLGCKPCLCSLHSS 506
>gi|119608362|gb|EAW87956.1| laminin, gamma 3, isoform CRA_c [Homo sapiens]
Length = 1575
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCQ 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 101/242 (41%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ F C C C S N+ N+ G C
Sbjct: 774 CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQC----SGNVDPNAVGNCDPLSG 829
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C TGD C+ C Y A C C C+P GSV CD V GQC
Sbjct: 830 HCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSC 889
Query: 128 AQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
H R SR FD R R CK +PLG S QC+ + G+
Sbjct: 890 LP-------HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQ 935
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+PGVTG CDRC + + F GC++C C+P G+ + C G C C+ EG
Sbjct: 936 CTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCVCRPGFEGY 992
Query: 244 QC 245
+C
Sbjct: 993 KC 994
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 86/189 (45%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 887
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC
Sbjct: 888 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQCTC------- 938
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R + R G I R C+ PLG + QC+ G C C+PG G K
Sbjct: 939 RPGVTGQACDRCQLGFFGFSIKGCRACR--CSPLGAASA---QCHENGTCVCRPGFEGYK 993
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 994 CDRCHDNFF 1002
>gi|119608361|gb|EAW87955.1| laminin, gamma 3, isoform CRA_b [Homo sapiens]
Length = 1588
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCQ 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 101/242 (41%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ F C C C S N+ N+ G C
Sbjct: 774 CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQC----SGNVDPNAVGNCDPLSG 829
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C TGD C+ C Y A C C C+P GSV CD V GQC
Sbjct: 830 HCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSC 889
Query: 128 AQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
H R SR FD R R CK +PLG S QC+ + G+
Sbjct: 890 LP-------HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQ 935
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+PGVTG CDRC + + F GC++C C+P G+ + C G C C+ EG
Sbjct: 936 CTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCVCRPGFEGY 992
Query: 244 QC 245
+C
Sbjct: 993 KC 994
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 887
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC + R
Sbjct: 888 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQC-----TCRP 940
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
V + + + F G I R C+ PLG + QC+ G C C+PG G K
Sbjct: 941 GVTGQACDRCQLGF--FGFSIKGCRACR--CSPLGAASA---QCHENGTCVCRPGFEGYK 993
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 994 CDRCHDNFF 1002
>gi|297270034|ref|XP_001118580.2| PREDICTED: laminin subunit gamma-3 [Macaca mulatta]
Length = 874
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C+
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCH 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCTCKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 HSGRC 448
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCTCKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPH 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
>gi|297685562|ref|XP_002820355.1| PREDICTED: laminin subunit gamma-3 [Pongo abelii]
Length = 1575
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE C++N+Y C C+C+
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTTGPHCESCQENFYHWDPRMPCQPCDCH 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+ VEG C
Sbjct: 445 SGRCPCKEKVEGNLC 459
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 32/193 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
GHCL C + G +CE C++ +Y+ + + C C+C+P GS++ Q G+C
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYRSTLVPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCS 888
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE-----SAQL 130
C P VTG C C +D GC+SC+C+P GS ++ C GQC + Q
Sbjct: 889 CLPHVTGRDCSLCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQCTCRPGVTGQA 946
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
R ++ F + W R C PLG + QC+ G C C+PG
Sbjct: 947 CDRCQL---------GFFSFSIKGCWACR-CS----PLGAASA---QCHENGTCVCRPGF 989
Query: 191 TGDKCDRCDVNHY 203
G KCDRC N +
Sbjct: 990 EGYKCDRCHDNFF 1002
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 101/242 (41%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 774 CTHCPPGQRGRRCEVCDDGFF---GDPLGLSGHPQPCHQCQC----SGNVDPNAVGNCDP 826
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TGD C+ C Y C C C+P GSV CD V GQ
Sbjct: 827 LSGHCLRCLHNTTGDHCEHCQEGFYRSTLVPRPADKCMPCSCHPQGSVSEQMPCDPVTGQ 886
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
C S GR + + FD R R CK +PLG S QC+ + G+
Sbjct: 887 C-SCLPHVTGR---DCSLCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQ 935
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+PGVTG CDRC + + F GC +C C+P G+ + C G C C+ EG
Sbjct: 936 CTCRPGVTGQACDRCQLGFFSFSIKGCWACRCSPLGAA--SAQCHE-NGTCVCRPGFEGY 992
Query: 244 QC 245
+C
Sbjct: 993 KC 994
>gi|395844378|ref|XP_003794939.1| PREDICTED: laminin subunit gamma-3 isoform 2 [Otolemur garnettii]
Length = 1594
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG CL C+ GP+CE C++N+Y C C+C+
Sbjct: 329 CNCSGRSEECTFDRELFRSTGHGGRCLHCRDHTAGPHCEHCQENFYHWDLQMPCQPCDCH 388
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 389 AAGSLHLQCDDTGTCTCKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNSAGSLG---TCDP 445
Query: 121 VKGQC 125
G+C
Sbjct: 446 RSGRC 450
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 390 AGSLHLQCDDTGTCTCKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNSAGSLG---TCDPR 446
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG+ C
Sbjct: 447 SGRCPCKENVEGSMC 461
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCN---SEGRCQ 76
GHC C + G +CE+CR+ +Y + + C +C+CNP GS+ Q G+C
Sbjct: 833 GHCSRCLHNTTGDHCERCREGFYGSALAPWPAERCASCSCNPEGSVGEQIPCDPVTGQCS 892
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C C +D GC+SC C+P GS +N C GQC R
Sbjct: 893 CLPHVTGRDCGHCSPGFFDLQPGRGCRSCMCHPLGSQEN--QCHPKTGQCPC-------R 943
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+ R G I R C+ PLG + + QC+ C C+PG G KC
Sbjct: 944 PGVVGQACDRCQLGFFGFSIKGCRACR--CSPLG---TTSAQCHENSTCVCRPGFAGYKC 998
Query: 196 DRCDVNHY 203
DRC N +
Sbjct: 999 DRCHDNFF 1006
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ C C CN N+ N+ G C
Sbjct: 778 CTHCPPGQRGRRCEICDDGFFGDPLGLSGAPQPCRQCQCNG----NVDPNAVGNCDPLSG 833
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCE- 126
+C TGD C+RC Y A C SC CNP GSV CD V GQC
Sbjct: 834 HCSRCLHNTTGDHCERCREGFYGSALAPWPAERCASCSCNPEGSVGEQIPCDPVTGQCSC 893
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQ 185
++ R H S FD R R C +PLG S QC+ + G+C
Sbjct: 894 LPHVTGRDCGHC-----SPGFFDLQPGR--GCRSCM--CHPLG---SQENQCHPKTGQCP 941
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PGV G CDRC + + F GC++C C+P G+ + +S C C+ G +C
Sbjct: 942 CRPGVVGQACDRCQLGFFGFSIKGCRACRCSPLGTTSAQCHENST---CVCRPGFAGYKC 998
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
G C++C+ ++ S C AC C+P+G+ + QC+ C C+PG G KCDRC N +
Sbjct: 948 GQACDRCQLGFFGFSIKG-CRACRCSPLGTTSAQCHENSTCVCRPGFAGYKCDRCHDNFF 1006
Query: 95 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
E G + EC P C S+ + E+A+L +R + E
Sbjct: 1007 -LTEDGTQCQEC---------PICYSLVKE-EAAKLKARLTLMEE 1040
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 86/247 (34%), Gaps = 65/247 (26%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCD 90
G CE C Y +++ G + C C CN G+ + + G C C G C+RC
Sbjct: 685 GQFCESCAPGYKRETPRGGPYANCIPCTCNQHGTCD---PNTGICVCSHHTEGLSCERCS 741
Query: 91 VNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
Y G CK C C + P V C RG
Sbjct: 742 PGFYGTPFTGQANPCKPCPCPRQSACTVMPGSGEVV--CTHCPPGQRG------------ 787
Query: 147 NFDPAGNRIWDLRRCKR--DTY---PLGHGGSL----------NLQCNSEGRC------- 184
RRC+ D + PLG G+ N+ N+ G C
Sbjct: 788 ------------RRCEICDDGFFGDPLGLSGAPQPCRQCQCNGNVDPNAVGNCDPLSGHC 835
Query: 185 -QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+C TGD C+RC Y A C SC CNP GSV CD V GQC C
Sbjct: 836 SRCLHNTTGDHCERCREGFYGSALAPWPAERCASCSCNPEGSVGEQIPCDPVTGQCSCLP 895
Query: 239 NVEGAQC 245
+V G C
Sbjct: 896 HVTGRDC 902
>gi|395844376|ref|XP_003794938.1| PREDICTED: laminin subunit gamma-3 isoform 1 [Otolemur garnettii]
Length = 1579
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG CL C+ GP+CE C++N+Y C C+C+
Sbjct: 329 CNCSGRSEECTFDRELFRSTGHGGRCLHCRDHTAGPHCEHCQENFYHWDLQMPCQPCDCH 388
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 389 AAGSLHLQCDDTGTCTCKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNSAGSLG---TCDP 445
Query: 121 VKGQC 125
G+C
Sbjct: 446 RSGRC 450
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 390 AGSLHLQCDDTGTCTCKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNSAGSLG---TCDPR 446
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG+ C
Sbjct: 447 SGRCPCKENVEGSMC 461
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCN---SEGRCQ 76
GHC C + G +CE+CR+ +Y + + C +C+CNP GS+ Q G+C
Sbjct: 833 GHCSRCLHNTTGDHCERCREGFYGSALAPWPAERCASCSCNPEGSVGEQIPCDPVTGQCS 892
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C C +D GC+SC C+P GS +N C GQC R
Sbjct: 893 CLPHVTGRDCGHCSPGFFDLQPGRGCRSCMCHPLGSQEN--QCHPKTGQCPC-------R 943
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+ R G I R C+ PLG + + QC+ C C+PG G KC
Sbjct: 944 PGVVGQACDRCQLGFFGFSIKGCRACR--CSPLG---TTSAQCHENSTCVCRPGFAGYKC 998
Query: 196 DRCDVNHY 203
DRC N +
Sbjct: 999 DRCHDNFF 1006
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 102/243 (41%), Gaps = 45/243 (18%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C CN N+ N+ G C
Sbjct: 778 CTHCPPGQRGRRCEICDDGFF---GDPLGLSGAPQPCRQCQCNG----NVDPNAVGNCDP 830
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TGD C+RC Y A C SC CNP GSV CD V GQ
Sbjct: 831 LSGHCSRCLHNTTGDHCERCREGFYGSALAPWPAERCASCSCNPEGSVGEQIPCDPVTGQ 890
Query: 125 CE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-G 182
C ++ R H S FD R R C +PLG S QC+ + G
Sbjct: 891 CSCLPHVTGRDCGHC-----SPGFFDLQPGR--GCRSCM--CHPLG---SQENQCHPKTG 938
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+C C+PGV G CDRC + + F GC++C C+P G+ + +S C C+ G
Sbjct: 939 QCPCRPGVVGQACDRCQLGFFGFSIKGCRACRCSPLGTTSAQCHENST---CVCRPGFAG 995
Query: 243 AQC 245
+C
Sbjct: 996 YKC 998
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
G C++C+ ++ S C AC C+P+G+ + QC+ C C+PG G KCDRC N +
Sbjct: 948 GQACDRCQLGFFGFSIKG-CRACRCSPLGTTSAQCHENSTCVCRPGFAGYKCDRCHDNFF 1006
Query: 95 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
E G + EC P C S+ + E+A+L +R + E
Sbjct: 1007 -LTEDGTQCQEC---------PICYSLVKE-EAAKLKARLTLMEE 1040
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 86/247 (34%), Gaps = 65/247 (26%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCD 90
G CE C Y +++ G + C C CN G+ + + G C C G C+RC
Sbjct: 685 GQFCESCAPGYKRETPRGGPYANCIPCTCNQHGTCD---PNTGICVCSHHTEGLSCERCS 741
Query: 91 VNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
Y G CK C C + P V C RG
Sbjct: 742 PGFYGTPFTGQANPCKPCPCPRQSACTVMPGSGEVV--CTHCPPGQRG------------ 787
Query: 147 NFDPAGNRIWDLRRCKR--DTY---PLGHGGSL----------NLQCNSEGRC------- 184
RRC+ D + PLG G+ N+ N+ G C
Sbjct: 788 ------------RRCEICDDGFFGDPLGLSGAPQPCRQCQCNGNVDPNAVGNCDPLSGHC 835
Query: 185 -QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+C TGD C+RC Y A C SC CNP GSV CD V GQC C
Sbjct: 836 SRCLHNTTGDHCERCREGFYGSALAPWPAERCASCSCNPEGSVGEQIPCDPVTGQCSCLP 895
Query: 239 NVEGAQC 245
+V G C
Sbjct: 896 HVTGRDC 902
>gi|149039042|gb|EDL93262.1| laminin gamma 3 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 1212
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+ELY TGHGGHC C+ GP+CE C NYY+ C C+C+
Sbjct: 336 CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTAGPHCEHCEKNYYRWDPKTPCQPCDCH 395
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC++ G C CK VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 396 PAGSLSLQCDNSGTCPCKLTVTGWKCDRCLPGFHSLSEGGCRPCTCNVAGSLG---TCDP 452
Query: 121 VKGQC 125
G C
Sbjct: 453 RSGNC 457
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQ-CN-SEGRC 75
H G CL C + G +CE C++ +Y + + C C+C+P GS + + CN + G+C
Sbjct: 839 HSGRCLRCLHNTTGAHCEHCQEGFYGSALATRPADKCAPCSCDPRGSSSQKTCNPATGQC 898
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VTG C RC YD GC+SC+C+P GS++N C GQC
Sbjct: 899 ACLPYVTGRDCSRCSPGFYDLQPGRGCQSCKCHPVGSLEN--KCHPKTGQCPC------- 949
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R + R G I R C+ PLG + + QC+ C C+PG G K
Sbjct: 950 RPGVTGQACDRCQLGFFGFSIKGCRDCR--CSPLG---AASPQCHENSTCVCRPGFVGYK 1004
Query: 195 CDRCDVNHYDF-GEAGCKSC 213
CDRC N + G+ GC+ C
Sbjct: 1005 CDRCQDNFFLVDGDTGCQEC 1024
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC++ G C CK VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 397 AGSLSLQCDNSGTCPCKLTVTGWKCDRCLPGFHSLSEGGCRPCTCNVAGSLG---TCDPR 453
Query: 231 KGQCECKDNVEGAQC 245
G C CK+NVEG C
Sbjct: 454 SGNCPCKENVEGGLC 468
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 92/246 (37%), Gaps = 52/246 (21%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-Q 76
C C + G CE C D ++ C C C+ LN N GRC +
Sbjct: 786 CTHCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSRNVDLNAVGNCDPHSGRCLR 845
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C TG C+ C Y A C C C+P GS C+ GQC
Sbjct: 846 CLHNTTGAHCEHCQEGFYGSALATRPADKCAPCSCDPRGSSSQK-TCNPATGQCACLPYV 904
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS 180
+ GR D RC Y L G GSL +C+
Sbjct: 905 T-GR---------------------DCSRCSPGFYDLQPGRGCQSCKCHPVGSLENKCHP 942
Query: 181 E-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G+C C+PGVTG CDRC + + F GC+ C C+P G+ +P C C C+
Sbjct: 943 KTGQCPCRPGVTGQACDRCQLGFFGFSIKGCRDCRCSPLGAA--SPQCHE-NSTCVCRPG 999
Query: 240 VEGAQC 245
G +C
Sbjct: 1000 FVGYKC 1005
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 99/240 (41%), Gaps = 31/240 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGR--- 74
G CL C +GP+CE+C +Y G+ F C C C G E R
Sbjct: 732 GICL-CGHHTEGPSCERCMPGFY---GNAFSGHADDCQPCPCP--GQSACTTIPESRDVV 785
Query: 75 -CQCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCES 127
C PG G +C+ C+ + G +G C+ C+C+ + NCD G+C
Sbjct: 786 CTHCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSRNVDLNAVGNCDPHSGRCLR 845
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQC 186
++ G H E + A C D G S CN + G+C C
Sbjct: 846 CLHNTTG-AHCEHCQEGFYGSALATRPADKCAPCSCDP----RGSSSQKTCNPATGQCAC 900
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P VTG C RC YD GC+SC+C+P GS++N C GQC C+ V G C
Sbjct: 901 LPYVTGRDCSRCSPGFYDLQPGRGCQSCKCHPVGSLEN--KCHPKTGQCPCRPGVTGQAC 958
>gi|432116585|gb|ELK37378.1| Laminin subunit gamma-3 [Myotis davidii]
Length = 1286
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S +C FD++L+ TGHGG CL C+ GP C+ C++N+Y+ C C+C+
Sbjct: 164 CNCSGHSEQCVFDQQLFRSTGHGGRCLHCRNHTAGPRCQLCQENFYRWKPWMPCQPCDCH 223
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC+ G C CK VTG KCDRC + E GC+ C C+PAGS+ CD
Sbjct: 224 PAGSLRLQCDDSGTCTCKATVTGWKCDRCLPGFHSLSEGGCRPCTCHPAGSLG---ACDP 280
Query: 121 VKGQC 125
G+C
Sbjct: 281 RSGRC 285
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL LQC+ G C CK VTG KCDRC + E GC+ C C+PAGS+ CD
Sbjct: 225 AGSLRLQCDDSGTCTCKATVTGWKCDRCLPGFHSLSEGGCRPCTCHPAGSLG---ACDPR 281
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG+QC
Sbjct: 282 SGRCPCKENVEGSQC 296
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 19/116 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
GHCL C + G CE+CRD +Y + D C +C C+ +GS + QC+ C C+
Sbjct: 649 GHCLRCLFNTTGARCERCRDGFYGSALAPRPADK-CVSCRCSLLGSASPQCHENSTCVCR 707
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
PG G KCDRC N + + A C+ C P+C ++ + E+A+L +R
Sbjct: 708 PGFVGYKCDRCQDNFFLTADRARCQEC-----------PSCYTLV-KAEAAKLKTR 751
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 74/199 (37%), Gaps = 53/199 (26%)
Query: 34 DGPNCEKCRDNYYQKSGDNFC-TACNCNP---IGSLNLQCNSEGR----CQCKPGVTGDK 85
+GP+CE+C +Y G+ F A +C P G + E R C PG G +
Sbjct: 549 EGPSCERCLPGFY---GNPFAGRADDCQPCPCPGQSSCTTIPESREVVCTHCPPGQKGRR 605
Query: 86 CDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
C+ CD + G +G C+ C+C+ NCD + G C
Sbjct: 606 CETCDDGFFGDPLGLSGDPQPCRRCQCSGNVDPNAVGNCDPLSGHC-------------- 651
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG---------------GSLNLQCNSEGRC 184
R F+ G R RC+ Y GS + QC+ C
Sbjct: 652 ----LRCLFNTTGARC---ERCRDGFYGSALAPRPADKCVSCRCSLLGSASPQCHENSTC 704
Query: 185 QCKPGVTGDKCDRCDVNHY 203
C+PG G KCDRC N +
Sbjct: 705 VCRPGFVGYKCDRCQDNFF 723
>gi|449507995|ref|XP_004176253.1| PREDICTED: laminin subunit gamma-2 [Taeniopygia guttata]
Length = 1018
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 77/118 (65%), Gaps = 6/118 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD +L TG+G CL C G+ +GP CE+C++ ++++ G+ C C C+
Sbjct: 31 CDCNGMSRQCVFDWQLLRETGNGYRCLGCLGNTEGPRCERCQEGFFRRRGEQCCLPCLCH 90
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK------SCECNPAGSV 112
P GSL QC+S+GRC CKPG GDKCD+C + EAGC+ CEC+PAGS
Sbjct: 91 PWGSLGPQCDSDGRCSCKPGAMGDKCDQCQLGFESLSEAGCRRSGQSLQCECDPAGST 148
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 11/81 (13%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK------SCECNPAGSVKNTP 225
GSL QC+S+GRC CKPG GDKCD+C + EAGC+ CEC+PAGS T
Sbjct: 93 GSLGPQCDSDGRCSCKPGAMGDKCDQCQLGFESLSEAGCRRSGQSLQCECDPAGS---TG 149
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
+C S G+C CK++V G QC+
Sbjct: 150 DCHS--GRCVCKESVTGEQCQ 168
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C + G C++C+D ++ + C ACNC+ +G+ L+C S+G C CKP
Sbjct: 532 GECLKCIYNTAGFYCDRCKDGFFGNPLASDPADKCRACNCDSVGAEPLKCRSDGSCICKP 591
Query: 80 GVTGDKCDRCD 90
G G +C+ +
Sbjct: 592 GFEGPRCEESE 602
>gi|355567395|gb|EHH23736.1| hypothetical protein EGK_07272, partial [Macaca mulatta]
Length = 697
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C+
Sbjct: 270 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCH 329
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 330 SAGSLHLQCDDTGTCTCKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 386
Query: 121 VKGQC 125
G+C
Sbjct: 387 HSGRC 391
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 331 AGSLHLQCDDTGTCTCKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPH 387
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 388 SGRCPCKENVEGNLC 402
>gi|22761744|dbj|BAC11679.1| unnamed protein product [Homo sapiens]
Length = 529
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCQ 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
>gi|332833149|ref|XP_003312402.1| PREDICTED: laminin subunit gamma-3, partial [Pan troglodytes]
Length = 460
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C+
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCH 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
>gi|443703714|gb|ELU01149.1| hypothetical protein CAPTEDRAFT_219707 [Capitella teleta]
Length = 4496
Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats.
Identities = 89/265 (33%), Positives = 118/265 (44%), Gaps = 39/265 (14%)
Query: 1 CNCN--GFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTA 56
CNCN G F DK G C+ C+ + G C +C +Y C +
Sbjct: 14 CNCNQAGTEPGSFCDKVT-------GQCV-CKKNVQGLKCNECTAGFYDLDIGLVIGCKS 65
Query: 57 CNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGS 111
C CNP G++ QC+ G+C CK G CD+C N Y E GC+ C C+P G+
Sbjct: 66 CQCNPAGTVPGSQCDKLSGQCVCKENTHGKACDKCLPNTYSLSASNEEGCEECSCDPTGT 125
Query: 112 V------KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
V N CD GQC S + RG N DPAG L C R
Sbjct: 126 VPGDQLAPNDVTCDQNTGQC-SCISNRRGLKCDSCEEGYYINPDPAGG--CSLCDCDRT- 181
Query: 166 YPLGHGGSLNLQCNS-EGRCQC---KPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGS 220
G C++ G+CQC GV G +CD C ++ ++G C+ C C+ +GS
Sbjct: 182 -----GTIRGTVCDAITGQCQCLQGDSGVGGRRCDSCGDGYWGQDQSGRCQPCGCDTSGS 236
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
V +T C+ V GQC+CK EG QC
Sbjct: 237 VNDT--CNPVTGQCDCKMYTEGRQC 259
Score = 97.8 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 54 CTACNCNPIGSLNLQ-CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C CNCN G+ C+ G+C CK V G KC+ C YD GCKSC+CNP
Sbjct: 11 CNECNCNQAGTEPGSFCDKVTGQCVCKKNVQGLKCNECTAGFYDLDIGLVIGCKSCQCNP 70
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD---T 165
AG+V + CD + GQC + ++ G+ + + + + + C D T
Sbjct: 71 AGTVPGS-QCDKLSGQCVCKE-NTHGKACDKCLPNT---YSLSASNEEGCEECSCDPTGT 125
Query: 166 YPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVK 222
P ++ C+ + G+C C G KCD C+ +Y + GC C+C+ G+++
Sbjct: 126 VPGDQLAPNDVTCDQNTGQCSCISNRRGLKCDSCEEGYYINPDPAGGCSLCDCDRTGTIR 185
Query: 223 NTPNCDSVKGQCEC---KDNVEGAQCRS 247
T CD++ GQC+C V G +C S
Sbjct: 186 GTV-CDAITGQCQCLQGDSGVGGRRCDS 212
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 67/178 (37%), Gaps = 48/178 (26%)
Query: 94 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
+ FG+ GC C CN AG+ + CD V GQC + VQ K
Sbjct: 5 FGFGQ-GCNECNCNQAGTEPGS-FCDKVTGQCVCKK-----------NVQGLK------- 44
Query: 154 RIWDLRRCKRDTYPLGHG---GSLNLQCNS------------EGRCQCKPGVTGDKCDRC 198
C Y L G G + QCN G+C CK G CD+C
Sbjct: 45 ----CNECTAGFYDLDIGLVIGCKSCQCNPAGTVPGSQCDKLSGQCVCKENTHGKACDKC 100
Query: 199 DVNHYDFG---EAGCKSCECNPAGSV------KNTPNCDSVKGQCECKDNVEGAQCRS 247
N Y E GC+ C C+P G+V N CD GQC C N G +C S
Sbjct: 101 LPNTYSLSASNEEGCEECSCDPTGTVPGDQLAPNDVTCDQNTGQCSCISNRRGLKCDS 158
>gi|355752985|gb|EHH57031.1| hypothetical protein EGM_06590, partial [Macaca fascicularis]
Length = 674
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C+
Sbjct: 247 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCH 306
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCD C + E GC+ C CNPAGS+ CD
Sbjct: 307 SAGSLHLQCDDTGTCTCKPTVTGWKCDLCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 363
Query: 121 VKGQC 125
G+C
Sbjct: 364 HSGRC 368
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCD C + E GC+ C CNPAGS+ CD
Sbjct: 308 AGSLHLQCDDTGTCTCKPTVTGWKCDLCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPH 364
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 365 SGRCPCKENVEGNLC 379
>gi|410043323|ref|XP_003951603.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-3-like [Pan
troglodytes]
Length = 1577
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCHPCDCT 386
Query: 61 --PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 118
+GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ C
Sbjct: 387 RQXVGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TC 443
Query: 119 DSVKGQC 125
D G+C
Sbjct: 444 DPRSGRC 450
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 391 GSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPRS 447
Query: 232 GQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 448 GRCPCKENVEGNLC 461
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 101/242 (41%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ F C C C S N+ N+ G C
Sbjct: 776 CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQC----SGNVDPNAVGNCDPLSG 831
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C TGD C+ C Y A C C C+P GSV CD V GQC
Sbjct: 832 HCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSC 891
Query: 128 AQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
H R SR FD R R CK +PLG S QC+ + G+
Sbjct: 892 LP-------HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQ 937
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+PGVTG CDRC + + F GC++C C+P G+ + C G C C+ EG
Sbjct: 938 CTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCVCRPGFEGY 994
Query: 244 QC 245
+C
Sbjct: 995 KC 996
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 831 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 889
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC + R
Sbjct: 890 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQC-----TCRP 942
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
V + + + F G I R C+ PLG + QC+ G C C+PG G K
Sbjct: 943 GVTGQACDRCQLGF--FGFSIKGCRACR--CSPLGAASA---QCHENGTCVCRPGFEGYK 995
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 996 CDRCHDNFF 1004
>gi|348534124|ref|XP_003454553.1| PREDICTED: usherin [Oreochromis niloticus]
Length = 5191
Score = 116 bits (291), Expect = 8e-24, Method: Composition-based stats.
Identities = 84/259 (32%), Positives = 114/259 (44%), Gaps = 25/259 (9%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN + + + G CL C+ G +C+ C Y+ S + C C+C+
Sbjct: 523 CNCNDMGVMRTSTGAVSSCNRYTGQCL-CKPHVTGLSCDHCEFGYWNLSHPDGCMPCDCD 581
Query: 61 PIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNC 118
P+GSL+ C E G+C+CKPGV G +CD C + E C C+C+ G+V T +C
Sbjct: 582 PLGSLSPFCEPEGGQCECKPGVGGLRCDSCGRGLFGLRLEGSCAPCDCSQEGTVPGT-DC 640
Query: 119 DSVKGQCESAQLSSRGRVHTELRV--QSRKNFDPAGNR-IWDLRRCKRDTYPLGHGGSLN 175
D GQC + H E R R F R C D GG +
Sbjct: 641 DPYTGQCVCKE-------HVEGRRCDSCRHGFHTLEQRNSLGCLPCVCDISGAVSGGVCD 693
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG-------EAGCKSCECNPAGSVKNTPNCD 228
+Q G+C CK GV G +C C N+Y+ GC C C+P G+V + CD
Sbjct: 694 MQ---TGQCPCKEGVEGVQCTNCAHNYYNQTLDAEKGLSHGCVPCMCHPKGTVSGSV-CD 749
Query: 229 SVKGQCECKDNVEGAQCRS 247
S GQC C G C S
Sbjct: 750 SATGQCVCIPTRYGKDCSS 768
Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 125/272 (45%), Gaps = 40/272 (14%)
Query: 1 CNCNGFSNRCFFD-------KELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----K 48
C C+G + C +D E Y G GG C +C + G NCE+C +++
Sbjct: 404 CQCHGHALSCHYDVLADDHPDEHYR--GGGGVCDNCMHNTTGKNCEQCISGFFRLEDRDP 461
Query: 49 SGDNFCTACNCNPIGSLN--LQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCK 102
+ + C C+C G++N + C G+C CK VTG +C C + + GC
Sbjct: 462 TSVDVCQPCDCYTPGTVNGRMDCVQIGGQCHCKAAVTGRQCADCLPGWFGLTASNPNGCS 521
Query: 103 SCECNPAGSVKNT----PNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
SC CN G ++ + +C+ GQC ++ H E + + D
Sbjct: 522 SCNCNDMGVMRTSTGAVSSCNRYTGQCLCKPHVTGLSCDHCEFGYWNLSHPDGC------ 575
Query: 158 LRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCEC 215
C D PL GSL+ C E G+C+CKPGV G +CD C + E C C+C
Sbjct: 576 -MPC--DCDPL---GSLSPFCEPEGGQCECKPGVGGLRCDSCGRGLFGLRLEGSCAPCDC 629
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ G+V T +CD GQC CK++VEG +C S
Sbjct: 630 SQEGTVPGT-DCDPYTGQCVCKEHVEGRRCDS 660
Score = 80.1 bits (196), Expect = 7e-13, Method: Composition-based stats.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 30/224 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQ-CNSE-GRCQC 77
+ G C+ C+ +G C+ CR ++ N C C C+ G+++ C+ + G+C C
Sbjct: 643 YTGQCV-CKEHVEGRRCDSCRHGFHTLEQRNSLGCLPCVCDISGAVSGGVCDMQTGQCPC 701
Query: 78 KPGVTGDKCDRCDVNHYDFG-------EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
K GV G +C C N+Y+ GC C C+P G+V + CDS GQC
Sbjct: 702 KEGVEGVQCTNCAHNYYNQTLDAEKGLSHGCVPCMCHPKGTVSGSV-CDSATGQCVCIP- 759
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCK- 187
+ G+ + R F P D C D +P+G +L+ C S+ G+C C
Sbjct: 760 TRYGKDCSSCR--PGYYFSP------DQDICLECDCHPIG---ALHRSCESQTGQCVCAH 808
Query: 188 PGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDS 229
P V G +CD+C + F G C C C+P GS+ + + D+
Sbjct: 809 PSVGGRRCDQCREMFFGFNPGLGTCHPCACDPVGSINGSCHPDT 852
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQC-KPGV 81
G C+ C R G +C CR YY + C C+C+PIG+L+ C S+ G+C C P V
Sbjct: 753 GQCV-CIPTRYGKDCSSCRPGYYFSPDQDICLECDCHPIGALHRSCESQTGQCVCAHPSV 811
Query: 82 TGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
G +CD+C + F G C C C+P GS+ + C G C S
Sbjct: 812 GGRRCDQCREMFFGFNPGLGTCHPCACDPVGSINGS--CHPDTGICAS 857
>gi|50979208|ref|NP_001003351.1| laminin subunit gamma-2 precursor [Canis lupus familiaris]
gi|17998675|gb|AAL54875.1| laminin-5 gamma 2 [Canis lupus familiaris]
Length = 1196
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 104/218 (47%), Gaps = 59/218 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DGP CE C+D +Y++ + C CNC+
Sbjct: 28 CDCNGKSRQCVFDQELHRQTGNGFRCLNCNDNTDGPRCEHCKDGFYRQRERDRCLPCNCH 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC
Sbjct: 88 TKGSLSARCDNSGRCSCKPGVTGDRCDRCLPGFHTLTDAGC------------------- 128
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
Q ++ DP K D P G G +
Sbjct: 129 ---------------------TQDQRLLDP-----------KCDCDPAGISGPCD----- 151
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
EGRC CKP VTG++CDRC +Y GC C C
Sbjct: 152 EGRCVCKPAVTGERCDRCRPGYYHLDGGNPEGCTQCFC 189
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDQRLLDPKCDCDPAGI--- 146
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CD +G+C CK V G +C
Sbjct: 147 SGPCD--EGRCVCKPAVTGERC 166
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +C++C+ Y+ GD C ACNCNP GS +C S+G C
Sbjct: 536 GRCLKCIYNTAGVHCDQCKAGYF---GDPLAPNPADKCRACNCNPAGSEPGECRSDGSCV 592
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G C+ +
Sbjct: 593 CKPGFGGLNCEHAALT 608
>gi|301758872|ref|XP_002915292.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-3-like,
partial [Ailuropoda melanoleuca]
Length = 1519
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG CL C+ GP+CE+C++++Y+ S C C
Sbjct: 272 CNCSGHSEECAFDRELFRSTGHGGRCLRCRDHTAGPHCERCQEDFYRWSPWTPCQPCXLM 331
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL LQC++ G C CKP VTG KCDRC + E GC+ C C+ AGS+ CD
Sbjct: 332 GAGSLRLQCDASGACVCKPTVTGWKCDRCRPGFHSLSEGGCRPCACSVAGSLG---TCDP 388
Query: 121 VKGQC 125
G+C
Sbjct: 389 HGGRC 393
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 90/188 (47%), Gaps = 22/188 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
GHCL C + G +CE+C++ +Y + + CT C C+P GS++ Q C+ G+C
Sbjct: 777 GHCLRCLHNTTGAHCERCQEGFYGSALAPRPADRCTPCGCHPEGSVSEQRACDPVTGQCP 836
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C C YD GC+SC+C+P GS ++ C GQC R
Sbjct: 837 CLPHVTGRDCRHCSPGFYDLQPGRGCRSCKCHPLGSQED--RCHPKTGQCPC-------R 887
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
E + R G I R C+ P+G + QC+ G C CKPG G KC
Sbjct: 888 PGVEGQGCDRCQLGFFGFSIKGCRACR--CSPMGAASA---QCHKNGTCVCKPGFVGYKC 942
Query: 196 DRCDVNHY 203
DRC N +
Sbjct: 943 DRCQDNFF 950
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 168 LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
L GSL LQC++ G C CKP VTG KCDRC + E GC+ C C+ AGS+ C
Sbjct: 330 LMGAGSLRLQCDASGACVCKPTVTGWKCDRCRPGFHSLSEGGCRPCACSVAGSLG---TC 386
Query: 228 DSVKGQCECKDNVEGAQC 245
D G+C CK+NVEG C
Sbjct: 387 DPHGGRCPCKENVEGHLC 404
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 96/254 (37%), Gaps = 67/254 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D Y+ GD C C C S N+ N+ G C
Sbjct: 722 CTHCPLGQRGRRCEICDDGYF---GDPLGLSGAPQPCRRCQC----SGNVDPNAVGNCDP 774
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C+RC Y A C C C+P GSV CD V GQ
Sbjct: 775 LSGHCLRCLHNTTGAHCERCQEGFYGSALAPRPADRCTPCGCHPEGSVSEQRACDPVTGQ 834
Query: 125 CE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------G 172
C ++ R D R C Y L G G
Sbjct: 835 CPCLPHVTGR-----------------------DCRHCSPGFYDLQPGRGCRSCKCHPLG 871
Query: 173 SLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S +C+ + G+C C+PGV G CDRC + + F GC++C C+P G+ + C
Sbjct: 872 SQEDRCHPKTGQCPCRPGVEGQGCDRCQLGFFGFSIKGCRACRCSPMGAA--SAQCHK-N 928
Query: 232 GQCECKDNVEGAQC 245
G C CK G +C
Sbjct: 929 GTCVCKPGFVGYKC 942
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C+ ++ S C AC C+P+G+ + QC+ G C CKPG G KCDR
Sbjct: 886 CRPGVEGQGCDRCQLGFFGFSIKG-CRACRCSPMGAASAQCHKNGTCVCKPGFVGYKCDR 944
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C N + G + EC P+C ++ + E+A+L +R
Sbjct: 945 CQDNFF-LTAGGTRCQEC---------PSCYALVKE-EAAKLKAR 978
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+C TG C+RC Y A C C C+P GSV CD V GQC C +
Sbjct: 781 RCLHNTTGAHCERCQEGFYGSALAPRPADRCTPCGCHPEGSVSEQRACDPVTGQCPCLPH 840
Query: 240 VEGAQCR 246
V G CR
Sbjct: 841 VTGRDCR 847
>gi|326667876|ref|XP_687343.4| PREDICTED: laminin subunit gamma-3 [Danio rerio]
Length = 1634
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 74/112 (66%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G ++ C FD E Y TG GG CL C+ + GP+CE+CR+NY++ S C CNCN
Sbjct: 326 CNCSGLADECVFDVEQYRSTGQGGRCLGCRENTAGPHCEQCRENYFRSSALQPCQNCNCN 385
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
+GS++LQC+++G C C P V+G KCD C + G GC+ C+C+ GSV
Sbjct: 386 ALGSVSLQCDADGVCVCWPSVSGVKCDICKSGFHSLGPGGCRLCDCDERGSV 437
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G+C+ C G G +C +C Y+ C CNCNPIGSL+ C+ G+C C+ GV
Sbjct: 882 GNCV-CLGHVTGRDCGQCEAGYFNLQPGLGCEMCNCNPIGSLSSACHPITGQCMCRTGVE 940
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
G CD C + + F GC++C C+P GS
Sbjct: 941 GMSCDTCRMGFFGFSSRGCRACNCDPMGST 970
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 89/194 (45%), Gaps = 32/194 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------QKSGDNFCTACNCNPIGSLNLQCN---SEGR 74
G CL C G G +CEKCR YY Q + + C C CN G+ + + G
Sbjct: 824 GRCLKCLGHTTGDHCEKCRLGYYGNALANQLNPERKCKPCACNVAGTSGSPNDCHPNTGN 883
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C VTG C +C+ +++ GC+ C CNP GS+ + C + GQC
Sbjct: 884 CVCLGHVTGRDCGQCEAGYFNLQPGLGCEMCNCNPIGSLSSA--CHPITGQC-------- 933
Query: 134 GRVHTELRVQS----RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG 189
T + S R F +R R C D P+G S ++QC++ G C C+ G
Sbjct: 934 -MCRTGVEGMSCDTCRMGFFGFSSR--GCRACNCD--PMG---STSMQCHNNGTCSCRNG 985
Query: 190 VTGDKCDRCDVNHY 203
G KCD+C+ N+Y
Sbjct: 986 FVGYKCDKCEQNYY 999
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS++LQC+++G C C P V+G KCD C + G GC+ C+C+ GSV C +
Sbjct: 388 GSVSLQCDADGVCVCWPSVSGVKCDICKSGFHSLGPGGCRLCDCDERGSVG---VCSAED 444
Query: 232 GQCECKDNVEGAQC 245
G+C CK NVEG C
Sbjct: 445 GRCHCKANVEGQSC 458
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 103/275 (37%), Gaps = 82/275 (29%)
Query: 20 TGHGGHCLDC-------------QGDRDGPNCEKCRDNYYQKSGDNF--------CTACN 58
TG G CL C GD CE C D +Y G+ C C
Sbjct: 750 TGSPGDCLPCPCPDRTTCAQVPETGDVICVRCELCEDGFY---GNPLGWGGTVQPCVKCQ 806
Query: 59 CNPIGSLNLQCNSEGRC--------QCKPGVTGDKCDRCDVNHYDFG-------EAGCKS 103
CN N+ N+ G C +C TGD C++C + +Y E CK
Sbjct: 807 CNG----NVDANAVGVCDHMTGRCLKCLGHTTGDHCEKCRLGYYGNALANQLNPERKCKP 862
Query: 104 CECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
C CN AG+ + +C G C ++ R D +C+
Sbjct: 863 CACNVAGTSGSPNDCHPNTGNCVCLGHVTGR-----------------------DCGQCE 899
Query: 163 RDTYPLGHG-----------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
+ L G GSL+ C+ G+C C+ GV G CD C + + F GC
Sbjct: 900 AGYFNLQPGLGCEMCNCNPIGSLSSACHPITGQCMCRTGVEGMSCDTCRMGFFGFSSRGC 959
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C C+P GS + C + G C C++ G +C
Sbjct: 960 RACNCDPMGS--TSMQCHN-NGTCSCRNGFVGYKC 991
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 91/254 (35%), Gaps = 74/254 (29%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTG 83
C G C+ C + +++ D + C CNCN G+ C+ E G C C TG
Sbjct: 679 CPAGFAGQFCQLCAPGFTRETPDGGPFSPCVPCNCNQHGT----CHPETGVCACTDFTTG 734
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNC-DSVKGQCESAQLSSRGRVHT 138
C+RC+ +Y G C C C + P D + +CE
Sbjct: 735 RHCERCEDGYYGNALTGSPGDCLPCPCPDRTTCAQVPETGDVICVRCE------------ 782
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTY--PLGHGGSL----------NLQCNSEGRC-- 184
C+ Y PLG GG++ N+ N+ G C
Sbjct: 783 ---------------------LCEDGFYGNPLGWGGTVQPCVKCQCNGNVDANAVGVCDH 821
Query: 185 ------QCKPGVTGDKCDRCDVNHYDFG-------EAGCKSCECNPAGSVKNTPNCDSVK 231
+C TGD C++C + +Y E CK C CN AG+ + +C
Sbjct: 822 MTGRCLKCLGHTTGDHCEKCRLGYYGNALANQLNPERKCKPCACNVAGTSGSPNDCHPNT 881
Query: 232 GQCECKDNVEGAQC 245
G C C +V G C
Sbjct: 882 GNCVCLGHVTGRDC 895
>gi|432089377|gb|ELK23328.1| Laminin subunit gamma-2 [Myotis davidii]
Length = 1211
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 104/218 (47%), Gaps = 59/218 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD EL+ +TGHG CL+C + G +CE+C++ +Y++ + C CNCN
Sbjct: 27 CDCNGKSQQCVFDPELHRQTGHGFRCLNCNDNTGGIHCERCKEGFYRQRERDRCLPCNCN 86
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC
Sbjct: 87 SKGSLSARCDNSGRCSCKPGVTGDRCDRCLPGFHTLTDAGC------------------- 127
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
Q ++ DP K D P G G C+S
Sbjct: 128 ---------------------TQDQRLIDP-----------KCDCDPAGVSGP----CDS 151
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y GC C C
Sbjct: 152 -GRCVCKPAVTGERCDRCRPGYYHLDGGNPEGCTQCFC 188
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG
Sbjct: 89 GSLSARCDNSGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDQRLIDPKCDCDPAGV--- 145
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CDS G+C CK V G +C
Sbjct: 146 SGPCDS--GRCVCKPAVTGERC 165
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C + G +C++C+ Y+ + + C ACNCNP+GS ++C S+G C CKP
Sbjct: 535 GRCLKCIHNTAGAHCDQCKAGYFGNPLAPNPADKCRACNCNPMGSEPVECRSDGSCICKP 594
Query: 80 GVTGDKCDRCDVN 92
G G C+ +
Sbjct: 595 GFGGPNCEHAALT 607
>gi|351701142|gb|EHB04061.1| Laminin subunit gamma-2 [Heterocephalus glaber]
Length = 1253
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 105/218 (48%), Gaps = 59/218 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG SN+C F++EL+ RTG+G CL+C+ + DG +CE+CR+ +Y + C CNC+
Sbjct: 91 CDCNGKSNQCIFEEELHWRTGNGLRCLNCKDNTDGLHCERCREGFYWHQDRDHCLPCNCH 150
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+ QC++ GRC CKPGVTGDKCD+C + +AGC
Sbjct: 151 SKGSLSPQCDNSGRCSCKPGVTGDKCDQCLPGFHMLTDAGC------------------- 191
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+ R+ + + DPAG L C+S
Sbjct: 192 ---------------TQDQRRLAFKCDCDPAG---------------------LAGPCDS 215
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
G C CKP VTG++CDRC +Y GC C C
Sbjct: 216 -GHCVCKPAVTGERCDRCRPGYYHLDAGNPEGCTQCFC 252
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ QC++ GRC CKPGVTGDKCD+C + +AGC C+C+PAG
Sbjct: 153 GSLSPQCDNSGRCSCKPGVTGDKCDQCLPGFHMLTDAGCTQDQRRLAFKCDCDPAGLAG- 211
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CDS G C CK V G +C
Sbjct: 212 --PCDS--GHCVCKPAVTGERC 229
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQ 76
G G CL C + G NC++C+ Y+ S N C ACNCNP+GS + +C S+G C
Sbjct: 595 GLTGRCLKCIHNTAGFNCDQCKAGYFGDPLAPSRANKCQACNCNPVGSQSGECRSDGSCV 654
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 655 CKPGFGGLNCE 665
>gi|351697300|gb|EHB00219.1| Laminin subunit gamma-3, partial [Heterocephalus glaber]
Length = 1530
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+C+G S C FD EL+ TG GG C C GP+CE+C +N+Y+ C C+C+
Sbjct: 269 CSCSGRSKDCTFDLELFRSTGRGGRCHHCLDHTAGPHCERCEENFYRWDQRAPCRPCDCH 328
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GS LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 329 PAGSWRLQCDASGTCPCKPSVTGWKCDRCLPGFHSLSEGGCRPCTCNAAGSLD---TCDP 385
Query: 121 VKGQC 125
G+C
Sbjct: 386 RSGRC 390
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 330 AGSWRLQCDASGTCPCKPSVTGWKCDRCLPGFHSLSEGGCRPCTCNAAGSLD---TCDPR 386
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG+ C
Sbjct: 387 SGRCPCKENVEGSLC 401
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH 93
G +C C +Y C +C C+P+GS QC+ E G+C C+PGV G CDRC
Sbjct: 839 GRDCSLCSPGFYDLQPGRGCRSCACHPLGSQEKQCHPETGQCPCRPGVAGLACDRCQPGF 898
Query: 94 YDFGEAGCKSCECNPAGSV 112
+ F GC++C C+P G+
Sbjct: 899 FGFSIKGCRACRCSPLGAA 917
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 86/204 (42%), Gaps = 27/204 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
G CL C G CE+C + +Y + D C C+C+ GS+ Q G+C
Sbjct: 773 GRCLRCLHSTAGERCEQCLEGFYGSALAPRPADK-CRPCSCSRGGSVAEQTPCDPVTGQC 831
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VTG C C YD GC+SC C+P GS + C GQC R
Sbjct: 832 ACLPHVTGRDCSLCSPGFYDLQPGRGCRSCACHPLGSQEK--QCHPETGQC-----PCRP 884
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
V + + F G I R C+ PLG + QC+ C C+PG G K
Sbjct: 885 GVAGLACDRCQPGF--FGFSIKGCRACR--CSPLGAALA---QCHENSTCVCQPGFMGYK 937
Query: 195 CDRCDVNHYDFGEAGCKSC-ECNP 217
CDRC N F AG C EC P
Sbjct: 938 CDRCRDNF--FPTAGGTLCQECPP 959
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 87/206 (42%), Gaps = 40/206 (19%)
Query: 38 CEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCN---SEGRC-QCKPGVTGDK 85
CE C D ++ GD C C C+ LN N GRC +C G++
Sbjct: 730 CESCDDGFF---GDPLGLSADPQPCRQCQCSGNVDLNALGNCDPLSGRCLRCLHSTAGER 786
Query: 86 CDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
C++C Y A C+ C C+ GSV CD V GQC L
Sbjct: 787 CEQCLEGFYGSALAPRPADKCRPCSCSRGGSVAEQTPCDPVTGQCAC------------L 834
Query: 141 RVQSRKNFDPAGNRIWDL---RRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
+ ++ +DL R C+ +PLG S QC+ E G+C C+PGV G C
Sbjct: 835 PHVTGRDCSLCSPGFYDLQPGRGCRSCACHPLG---SQEKQCHPETGQCPCRPGVAGLAC 891
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSV 221
DRC + F GC++C C+P G+
Sbjct: 892 DRCQPGFFGFSIKGCRACRCSPLGAA 917
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 93/244 (38%), Gaps = 61/244 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG ++ C D G CQ + G NCE+C + + N
Sbjct: 213 CKCNGHASECSPD-------AAGRLVCRCQHNTTGANCERCLPFFQDRPWARGTAQAANE 265
Query: 54 CTACNCNPIG---SLNLQCNSE----GRCQ-CKPGVTGDKCDRCDVNHYDFGE-AGCKSC 104
C C+C+ + +L+ GRC C G C+RC+ N Y + + A C+ C
Sbjct: 266 CLPCSCSGRSKDCTFDLELFRSTGRGGRCHHCLDHTAGPHCERCEENFYRWDQRAPCRPC 325
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
+C+PAGS + CD+ G C + S G W RC
Sbjct: 326 DCHPAGSWRL--QCDA-SGTC-PCKPSVTG---------------------WKCDRCLPG 360
Query: 165 TYPLGHGGSLNLQCNS----------EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCK 211
+ L GG CN+ GRC CK V G CDRC ++ AGC
Sbjct: 361 FHSLSEGGCRPCTCNAAGSLDTCDPRSGRCPCKENVEGSLCDRCRPGTFNLQPHNPAGCS 420
Query: 212 SCEC 215
SC C
Sbjct: 421 SCFC 424
>gi|281337826|gb|EFB13410.1| hypothetical protein PANDA_013145 [Ailuropoda melanoleuca]
Length = 1165
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD EL+ TG+G CL+C + DGP CE+C+D +Y++ + C CNC+
Sbjct: 2 CDCNGKSRQCVFDAELHRHTGNGFRCLNCNDNTDGPRCERCKDGFYRQRERDRCLPCNCH 61
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C+ GRC CKPGVTGD+CDRC + +AGC C+C+PAG
Sbjct: 62 TKGSLSARCDHSGRCSCKPGVTGDRCDRCLPGFHSLTDAGCAQDQWLLDSKCDCDPAG 119
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C+ GRC CKPGVTGD+CDRC + +AGC C+C+PAG
Sbjct: 64 GSLSARCDHSGRCSCKPGVTGDRCDRCLPGFHSLTDAGCAQDQWLLDSKCDCDPAGV--- 120
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CD +G+C CK V G +C
Sbjct: 121 SGPCD--EGRCVCKPAVTGERC 140
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +C++C+ Y+ GD C ACNCNP GS +C S+G C
Sbjct: 510 GRCLKCVHNTAGVHCDQCKAGYF---GDPLAPNPADKCRACNCNPAGSEPGECRSDGSCV 566
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G CD +
Sbjct: 567 CKPGFGGPSCDHAALT 582
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
EGRC CKP VTG++CDRC +Y GC C C
Sbjct: 126 EGRCVCKPAVTGERCDRCRPGYYHLDGGNPEGCTQCFC 163
>gi|301777003|ref|XP_002923920.1| PREDICTED: laminin subunit gamma-2-like [Ailuropoda melanoleuca]
Length = 1197
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD EL+ TG+G CL+C + DGP CE+C+D +Y++ + C CNC+
Sbjct: 28 CDCNGKSRQCVFDAELHRHTGNGFRCLNCNDNTDGPRCERCKDGFYRQRERDRCLPCNCH 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C+ GRC CKPGVTGD+CDRC + +AGC C+C+PAG
Sbjct: 88 TKGSLSARCDHSGRCSCKPGVTGDRCDRCLPGFHSLTDAGCAQDQWLLDSKCDCDPAG 145
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C+ GRC CKPGVTGD+CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDHSGRCSCKPGVTGDRCDRCLPGFHSLTDAGCAQDQWLLDSKCDCDPAGV--- 146
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CD +G+C CK V G +C
Sbjct: 147 SGPCD--EGRCVCKPAVTGERC 166
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +C++C+ Y+ GD C ACNCNP GS +C S+G C
Sbjct: 536 GRCLKCVHNTAGVHCDQCKAGYF---GDPLAPNPADKCRACNCNPAGSEPGECRSDGSCV 592
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G CD +
Sbjct: 593 CKPGFGGPSCDHAALT 608
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
EGRC CKP VTG++CDRC +Y GC C C
Sbjct: 152 EGRCVCKPAVTGERCDRCRPGYYHLDGGNPEGCTQCFC 189
>gi|449674332|ref|XP_002165286.2| PREDICTED: laminin subunit gamma-1-like [Hydra magnipapillata]
Length = 1037
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 84/128 (65%), Gaps = 5/128 (3%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN 58
C+CNG ++ C FD++L+ + + GG C++CQ + G +CEKC+DN+Y++ G+ C C
Sbjct: 332 CDCNGLADECVFDEQLWIDSSYQSGGRCINCQKNTAGIHCEKCKDNHYRRDGEIACHPCG 391
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 118
CN +GS C+SEGRC C GV GDKCD+C +YDF GC C+C+ GS+ NC
Sbjct: 392 CNKVGSRTSSCSSEGRCVCHSGVIGDKCDQCKSGYYDFSPKGCSRCDCDVQGSIG--VNC 449
Query: 119 DSVKGQCE 126
D+ GQC+
Sbjct: 450 DAT-GQCQ 456
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 104/234 (44%), Gaps = 24/234 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP--IGSLNLQCNSEGRCQ-CKPGVTGDK 85
C+ + G NCE C + YY + C P GS + + +C C G TGD
Sbjct: 737 CEDNTSGKNCENCLEGYYGNPTNGHADDCKLCPCIFGSQCILISDHIKCTNCPVGHTGDL 796
Query: 86 CDRCDVNHY-----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
C+ CD ++ + + C+ C+CN + NCD G+C+ ++ +
Sbjct: 797 CEICDDGYFGIPTKNVKSSRCQKCDCNENVDLNAIGNCDHKTGECKKCIYNTMNGPEKKC 856
Query: 141 RVQSRKNF-----DPAGNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVT 191
+ S + +P GN CK PLG + C+S G CQC+ V
Sbjct: 857 ELCSVGYYGDALAEPKGN----CTACKCFESGTIVPLGFKSGDPIPCDSNGNCQCRKNVL 912
Query: 192 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +C+ C H++ EAGC+ CECN GS+ N CD G C+CK V G +C
Sbjct: 913 GKQCNTCPSGHWNI-EAGCEKCECNQIGSIGN--ECDIKTGSCKCKPGVTGRKC 963
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS C+SEGRC C GV GDKCD+C +YDF GC C+C+ GS+ NCD+
Sbjct: 396 GSRTSSCSSEGRCVCHSGVIGDKCDQCKSGYYDFSPKGCSRCDCDVQGSIG--VNCDAT- 452
Query: 232 GQCECKDNVEGAQC 245
GQC+CK+NV G +C
Sbjct: 453 GQCQCKENVIGKRC 466
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 84/185 (45%), Gaps = 37/185 (20%)
Query: 38 CEKCRDNYYQKSGDNF------CTACNCNPIGSL---------NLQCNSEGRCQCKPGVT 82
CE C YY GD CTAC C G++ + C+S G CQC+ V
Sbjct: 856 CELCSVGYY---GDALAEPKGNCTACKCFESGTIVPLGFKSGDPIPCDSNGNCQCRKNVL 912
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +C+ C H++ EAGC+ CECN GS+ N CD G C+ V
Sbjct: 913 GKQCNTCPSGHWNI-EAGCEKCECNQIGSIGN--ECDIKTGSCKCKP-----------GV 958
Query: 143 QSRK-NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
RK + G + L C+ + +P GS N C+S G C C PGV G KCD+C
Sbjct: 959 TGRKCDQCSTGFYQFSLTGCEACNCHP---EGSKNQNCSSTGICDCLPGVLGLKCDKCPE 1015
Query: 201 NHYDF 205
N Y+
Sbjct: 1016 NKYNL 1020
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ + G C C ++ C C CN IGS+ +C+ + G C+CKPGVTG KCD
Sbjct: 907 CRKNVLGKQCNTCPSGHWNIEAG--CEKCECNQIGSIGNECDIKTGSCKCKPGVTGRKCD 964
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C Y F GC++C C+P GS
Sbjct: 965 QCSTGFYQFSLTGCEACNCHPEGS 988
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 101/249 (40%), Gaps = 66/249 (26%)
Query: 21 GHGGHCLDCQG--------DRDGPNCEKCR----DNYYQKSGD--NFCTACNCNPIGS-- 64
GH C QG + G +CEKC D ++ + D N C AC+CN +
Sbjct: 282 GHASTCAHLQGKLYCECDHNTAGMDCEKCLPLFNDRPWRAAQDSANPCKACDCNGLADEC 341
Query: 65 -------LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNT 115
++ S GRC C+ G C++C NHY GE C C CN GS
Sbjct: 342 VFDEQLWIDSSYQSGGRCINCQKNTAGIHCEKCKDNHYRRDGEIACHPCGCNKVGS---- 397
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRK---------NFDPAGNRIWDLRRCKRDTY 166
++ SS GR V K +F P G RC D
Sbjct: 398 ----------RTSSCSSEGRCVCHSGVIGDKCDQCKSGYYDFSPKG-----CSRCDCDV- 441
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKN 223
GS+ + C++ G+CQCK V G +C++C NH+D GCK+C C G
Sbjct: 442 ----QGSIGVNCDATGQCQCKENVIGKRCNQCAPNHFDLDARNPKGCKACFCYGHGI--- 494
Query: 224 TPNCDSVKG 232
+C+ VKG
Sbjct: 495 --SCEGVKG 501
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C +YQ S C ACNC+P GS N C+S G C C PGV G KCD+
Sbjct: 954 CKPGVTGRKCDQCSTGFYQFSLTG-CEACNCHPEGSKNQNCSSTGICDCLPGVLGLKCDK 1012
Query: 89 CDVNHYDF 96
C N Y+
Sbjct: 1013 CPENKYNL 1020
>gi|296229570|ref|XP_002760328.1| PREDICTED: laminin subunit gamma-2 isoform 1 [Callithrix jacchus]
Length = 1193
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TGHG CL+C + DG +CE+C+D +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELHRQTGHGFRCLNCNDNTDGIHCERCKDGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGSRCDRCLPGFHMLTDAGCTQDQTLLDSKCDCDPAG 145
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGSRCDRCLPGFHMLTDAGCTQDQTLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD G+C CK V G +C
Sbjct: 149 --PCDG--GRCVCKAAVTGDRC 166
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C + G C++C+ Y+ + N C ACNCNPIGS ++C +G C CKP
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYFGDPLAPNPANKCRACNCNPIGSEPVECRGDGTCVCKP 595
Query: 80 GVTGDKCD 87
G G C+
Sbjct: 596 GFGGPNCE 603
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGSVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|403266347|ref|XP_003925350.1| PREDICTED: laminin subunit gamma-2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1193
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TGHG CL+C + DG +CE+C+D +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELHRQTGHGFRCLNCNDNTDGIHCERCKDGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGSRCDRCLPGFHMLTDAGCTQDQILLDSNCDCDPAG 145
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGSRCDRCLPGFHMLTDAGCTQDQILLDSNCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD G+C CK V G +C
Sbjct: 149 --PCDG--GRCVCKAAVTGERC 166
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNPIGS ++C +G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKPGYF---GDPLAPNPADKCRACNCNPIGSEPVECRGDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDQLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|444729324|gb|ELW69748.1| Laminin subunit gamma-2 [Tupaia chinensis]
Length = 1219
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 78/121 (64%), Gaps = 8/121 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ RTGHG CL+C+ + G +CE+C++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELHRRTGHGFRCLNCEDNTAGLHCERCQEGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSV 112
GS++ +C+S GRC CKPGVTGD+CDRC + ++GC C C+PAG
Sbjct: 88 SKGSISPRCDSSGRCSCKPGVTGDRCDRCLPGFHTLTDSGCTQDQRLPDSKCNCDPAGIA 147
Query: 113 K 113
+
Sbjct: 148 R 148
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GS++ +C+S GRC CKPGVTGD+CDRC + ++GC C C+PAG +
Sbjct: 90 GSISPRCDSSGRCSCKPGVTGDRCDRCLPGFHTLTDSGCTQDQRLPDSKCNCDPAGIAR- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
C++ G+C CK V G +C
Sbjct: 149 --PCEA--GRCICKSAVTGERC 166
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +C++C+ Y+ GD C ACNCNP+GS+ ++C S+G C
Sbjct: 540 GRCLKCIHNTAGAHCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSVPVECRSDGSCV 596
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G C+ +
Sbjct: 597 CKPGFGGFNCEHAALT 612
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 488 CPPGVTGARCELCADGYFGDPFGERGPVRPCQPCQCNNNVDPSASGNCDPLTGRCLKCIH 547
Query: 239 NVEGAQC 245
N GA C
Sbjct: 548 NTAGAHC 554
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 77 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C
Sbjct: 488 CPPGVTGARCELCADGYFGDPFGERGPVRPCQPCQCNNNVDPSASGNCDPLTGRCLKCIH 547
Query: 131 SSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCK 187
++ G H + Q + + DP D +C+ + P+G S+ ++C S+G C CK
Sbjct: 548 NTAG-AHCD---QCKAGYFGDPLAPNPAD--KCRACNCNPMG---SVPVECRSDGSCVCK 598
Query: 188 PGVTGDKCDRCDVN 201
PG G C+ +
Sbjct: 599 PGFGGFNCEHAALT 612
>gi|363736534|ref|XP_422285.3| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-2 [Gallus
gallus]
Length = 1175
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 75/120 (62%), Gaps = 9/120 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD +L TG+G CL C G+ G +CE+C++ YY++ + C C C+
Sbjct: 26 CDCNGMSRQCVFDWQLLMETGNGYRCLGCLGNTAGAHCERCKEGYYRQQDGDCCLPCRCH 85
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS---------CECNPAGS 111
P GSL+ QC+S GRC C+PGV G+KCDRC + EAGC+ C C+PAG+
Sbjct: 86 PQGSLSTQCDSNGRCSCRPGVMGEKCDRCQPGFHSLSEAGCQGYGQXVLGQLCACDPAGT 145
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 15/83 (18%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS---------CECNPAGSVK 222
GSL+ QC+S GRC C+PGV G+KCDRC + EAGC+ C C+PAG+
Sbjct: 88 GSLSTQCDSNGRCSCRPGVMGEKCDRCQPGFHSLSEAGCQGYGQXVLGQLCACDPAGT-- 145
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
D V G+C CK V G +C
Sbjct: 146 ----GDCVSGRCICKVGVTGERC 164
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C + G +CE+C+D ++ + + C ACNCN +G+ L C ++G C CKP
Sbjct: 529 GECLKCIYNTAGFHCERCKDGFFGNPLAPNPADKCRACNCNSVGAEPLMCRNDGSCICKP 588
Query: 80 GVTGDKCDRCD 90
G G C++ +
Sbjct: 589 GFGGPNCEQSE 599
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CK GVTG++CDRC N Y+ AGC C C
Sbjct: 151 GRCICKVGVTGERCDRCKQNFYNLDARNPAGCSPCFC 187
>gi|348578396|ref|XP_003474969.1| PREDICTED: laminin subunit gamma-2-like [Cavia porcellus]
Length = 1189
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 79/118 (66%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ RTG+G CL+C+ + DG +CE+CR+ +Y++ + C CNC+
Sbjct: 27 CDCNGKSQQCIFDQELHWRTGNGFRCLNCKDNTDGLHCERCREGFYRRPDRDSCLPCNCH 86
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ C++ G C CKPGVTGDKCDRC + G+AGC C+C+PAG
Sbjct: 87 SKGSLSPLCDNFGWCSCKPGVTGDKCDRCLPGFHTLGDAGCTQDQRQLDFKCDCDPAG 144
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ C++ G C CKPGVTGDKCDRC + G+AGC C+C+PAG
Sbjct: 89 GSLSPLCDNFGWCSCKPGVTGDKCDRCLPGFHTLGDAGCTQDQRQLDFKCDCDPAGIAG- 147
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CDS G+C CK V G +C
Sbjct: 148 --PCDS--GRCVCKPAVTGERC 165
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQ 76
G G CL C + G NC++C+ Y+ + N C ACNC+P+GS QC S+G C
Sbjct: 531 GLTGRCLKCIHNTAGFNCDQCKAGYFGDPLAPNPANKCRACNCSPVGSEPGQCRSDGSCI 590
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 591 CKPGFGGLNCE 601
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG++CDRC +Y GC C C
Sbjct: 152 GRCVCKPAVTGERCDRCRAGYYHLDAGNPEGCTQCFC 188
>gi|390477005|ref|XP_003735225.1| PREDICTED: laminin subunit gamma-2 isoform 2 [Callithrix jacchus]
Length = 1010
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TGHG CL+C + DG +CE+C+D +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELHRQTGHGFRCLNCNDNTDGIHCERCKDGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGSRCDRCLPGFHMLTDAGCTQDQTLLDSKCDCDPAG 145
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGSRCDRCLPGFHMLTDAGCTQDQTLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD G+C CK V G +C
Sbjct: 149 --PCDG--GRCVCKAAVTGDRC 166
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C + G C++C+ Y+ + N C ACNCNPIGS ++C +G C CKP
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYFGDPLAPNPANKCRACNCNPIGSEPVECRGDGTCVCKP 595
Query: 80 GVTGDKCD 87
G G C+
Sbjct: 596 GFGGPNCE 603
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGSVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|410986026|ref|XP_003999313.1| PREDICTED: laminin subunit gamma-2 [Felis catus]
Length = 1192
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 80/118 (67%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+C+G S++C FD+EL+ +TG+G CL+C + DG +CE+C++ +Y++ + C CNCN
Sbjct: 28 CDCSGKSSQCVFDQELHRQTGNGFRCLNCIDNTDGVHCERCKEGFYRQRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
P G+L+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C PAG
Sbjct: 88 PRGALSARCDNSGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDQRPLDSKCDCEPAG 145
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
G+L+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C PAG
Sbjct: 90 GALSARCDNSGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDQRPLDSKCDCEPAGI--- 146
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CD +G+C CK V G +C
Sbjct: 147 SGPCD--EGRCVCKPAVTGERC 166
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCT-------ACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +C++C+ Y+ GD T ACNCNP+GS +C S+G C
Sbjct: 536 GRCLKCIHNTAGVHCDRCKAGYF---GDPLATNPADKCRACNCNPMGSEPGECRSDGSCV 592
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G C+ +
Sbjct: 593 CKPGYGGLTCEHAALT 608
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
EGRC CKP VTG++CDRC +Y GC C C
Sbjct: 152 EGRCVCKPAVTGERCDRCRPGYYHLDGGNPEGCTQCFC 189
>gi|339249948|ref|XP_003373959.1| putative laminin B [Trichinella spiralis]
gi|316969859|gb|EFV53899.1| putative laminin B [Trichinella spiralis]
Length = 1616
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 115/225 (51%), Gaps = 19/225 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C G+ G NCE+C+D++Y + +N C AC CN GSL+L C+ S G C CK
Sbjct: 791 GECLKCIGNTVGWNCERCKDSFYGNALENNCRACGCNLHGSLSLNCDQSNGTCPCKKYFI 850
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CD+C+ + D E GC C CN GS+ + CD V GQC R T V
Sbjct: 851 GRQCDQCEEGYGDI-ENGCVECACNEVGSL--SLRCDPVSGQCPCKAGVFGKRCDT--CV 905
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVN 201
+F G R + G N +C+ + G+C C P V G KCDRC
Sbjct: 906 SGYYDFSERGCRFCNC---------FAPGSVENGKCDLQTGQCVCLPNVVGQKCDRCQDG 956
Query: 202 HYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+Y+ GCK C+C+P GS + CD GQC+CK NV G +C
Sbjct: 957 YYNISSGEGCKPCDCDPHGS--DDEVCDQHTGQCKCKHNVAGDKC 999
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 112/229 (48%), Gaps = 26/229 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C+ C + G C++C+D YY S C C+C+P GS + C+ G+C+CK V
Sbjct: 937 GQCV-CLPNVVGQKCDRCQDGYYNISSGEGCKPCDCDPHGSDDEVCDQHTGQCKCKHNVA 995
Query: 83 GDKCDRCDVNHYDFGEAGCKSC-ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
GDKCD+C N++ + GCK C C G V C G+C ++ G + E
Sbjct: 996 GDKCDKCAPNYFGYVSHGCKECPRCPAPGHV-----CHPTTGECVCPP-NTVGDM-CEQC 1048
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 200
Q+ N+DP L+ C + GS + C+ G C+C+ G TG KC+ C
Sbjct: 1049 AQNSWNYDP-------LKGC--EACDCNIDGSKSSVCDLHTGNCKCRTGYTGQKCNLCMP 1099
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSV----KGQCECKDNVEGAQC 245
+DF C+ C+C G+ NT + D +GQC CK NV G +C
Sbjct: 1100 GFFDF--PVCRPCQCFLPGTDPNTCHSDGCTCDDQGQCACKKNVHGLKC 1146
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 112/282 (39%), Gaps = 73/282 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTA 56
C CNG S RC H GHCLDC G CE C YY + GD+ C
Sbjct: 656 CLCNGRSLRC---------DAHTGHCLDCTHHTTGARCEHCARGYYGNPQLQGGDSACKP 706
Query: 57 CNC---NPIGSLNLQCNSEGR------------CQCKPGVTGDKCDRCDVNHY-DFGEAG 100
C C NP + + C S C+ G TG KC++C ++ D G
Sbjct: 707 CACPLLNPENNFSPTCISAEYGLAHSYSADYICTDCQLGYTGIKCEQCADGYFGDPMVPG 766
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WD 157
C+ C+CN NC G+C GN + W+
Sbjct: 767 NFCQPCQCNGNVDTAAVGNCHHRTGEC----------------------LKCIGNTVGWN 804
Query: 158 LRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
RCK Y G+ GSL+L C+ S G C CK G +CD+C+ +
Sbjct: 805 CERCKDSFY--GNALENNCRACGCNLHGSLSLNCDQSNGTCPCKKYFIGRQCDQCEEGYG 862
Query: 204 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D E GC C CN GS+ + CD V GQC CK V G +C
Sbjct: 863 DI-ENGCVECACNEVGSL--SLRCDPVSGQCPCKAGVFGKRC 901
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 26/135 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
C C + C +D E+ + GG C+DC+ + G NC++C+D +Y+ +G
Sbjct: 220 CQCFNHATECRYDPEVEKQHLSLTPEGIYEGGGVCIDCKHNTQGINCQECKDFFYRPTGV 279
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
N C C C+P+GS++ C E G C CKPG G +C+RC + + ++
Sbjct: 280 SVYDQNTCQPCECDPLGSIDGSCVKEQSTAPEGMKPGDCFCKPGFGGKRCERCALGYRNY 339
Query: 97 GEAGCKSCECNPAGS 111
C+ C C+ AGS
Sbjct: 340 --PVCEPCPCSRAGS 352
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 81/212 (38%), Gaps = 44/212 (20%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNY--YQKSGDNFCTACN-----CNPIGSLNLQCNSEGR 74
H G C C+ + G C+KC NY Y G C C C+P + G
Sbjct: 984 HTGQC-KCKHNVAGDKCDKCAPNYFGYVSHGCKECPRCPAPGHVCHP---------TTGE 1033
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C P GD C++C N +++ GC++C+CN GS + CD G C+
Sbjct: 1034 CVCPPNTVGDMCEQCAQNSWNYDPLKGCEACDCNIDGSKSSV--CDLHTGNCKC----RT 1087
Query: 134 GRVHTELRVQSRKNFDPAGNRI-------WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
G + + FD R D C D C+ +G+C C
Sbjct: 1088 GYTGQKCNLCMPGFFDFPVCRPCQCFLPGTDPNTCHSD----------GCTCDDQGQCAC 1137
Query: 187 KPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
K V G KCD C + EA GC C C
Sbjct: 1138 KKNVHGLKCDECQPYSFSLEEANPDGCTECFC 1169
>gi|403266349|ref|XP_003925351.1| PREDICTED: laminin subunit gamma-2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1010
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TGHG CL+C + DG +CE+C+D +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELHRQTGHGFRCLNCNDNTDGIHCERCKDGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGSRCDRCLPGFHMLTDAGCTQDQILLDSNCDCDPAG 145
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGSRCDRCLPGFHMLTDAGCTQDQILLDSNCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD G+C CK V G +C
Sbjct: 149 --PCDG--GRCVCKAAVTGERC 166
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNPIGS ++C +G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKPGYF---GDPLAPNPADKCRACNCNPIGSEPVECRGDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDQLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|402857875|ref|XP_003893463.1| PREDICTED: laminin subunit gamma-2 [Papio anubis]
Length = 1193
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+ELY +TG+G CL+C + DG +CE+C+D +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELYRQTGNGFRCLNCNDNTDGIHCERCKDGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS ++C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPAEKCRACNCNPMGSEPVECRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPSCE 603
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDRGNPEGCTQCFC 189
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN ++ NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSSSGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 24/132 (18%)
Query: 77 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C PGVTG +C+ C ++ FGE G C+ C+CN ++ NCD + G+C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSSSGNCDRLTGRCLKC-- 541
Query: 131 SSRGRVHTELRV---QSRKNF--DP-AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC 184
+H + Q + + DP A N R C + P+G S ++C S+G C
Sbjct: 542 -----IHNTAGIYCDQCKAGYFGDPLAPNPAEKCRAC--NCNPMG---SEPVECRSDGTC 591
Query: 185 QCKPGVTGDKCD 196
CKPG G C+
Sbjct: 592 VCKPGFGGPSCE 603
>gi|355746106|gb|EHH50731.1| hypothetical protein EGM_01601 [Macaca fascicularis]
Length = 1193
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+ELY +TG+G CL+C + DG +CE+C+D +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELYRQTGNGFRCLNCNDNTDGIHCERCKDGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS ++C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPAEKCRACNCNPMGSEPVECRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
>gi|355558956|gb|EHH15736.1| hypothetical protein EGK_01866 [Macaca mulatta]
Length = 1193
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+ELY +TG+G CL+C + DG +CE+C+D +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELYRQTGNGFRCLNCNDNTDGIHCERCKDGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS ++C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPAEKCRACNCNPMGSEPVECRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDRGNPEGCTQCFC 189
>gi|109019107|ref|XP_001114169.1| PREDICTED: laminin subunit gamma-2 isoform 2 [Macaca mulatta]
Length = 1193
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+ELY +TG+G CL+C + DG +CE+C+D +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELYRQTGNGFRCLNCNDNTDGIHCERCKDGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS ++C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPAEKCRACNCNPMGSEPVECRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDRGNPEGCTQCFC 189
Score = 36.6 bits (83), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|297281294|ref|XP_002802072.1| PREDICTED: laminin subunit gamma-2 [Macaca mulatta]
Length = 1010
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+ELY +TG+G CL+C + DG +CE+C+D +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELYRQTGNGFRCLNCNDNTDGIHCERCKDGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS ++C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPAEKCRACNCNPMGSEPVECRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 24/132 (18%)
Query: 77 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKC-- 541
Query: 131 SSRGRVHTELRV---QSRKNF--DP-AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC 184
+H + Q + + DP A N R C + P+G S ++C S+G C
Sbjct: 542 -----IHNTAGIYCDQCKAGYFGDPLAPNPAEKCRAC--NCNPMG---SEPVECRSDGTC 591
Query: 185 QCKPGVTGDKCD 196
CKPG G C+
Sbjct: 592 VCKPGFGGPNCE 603
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|126352634|ref|NP_001075237.1| laminin subunit gamma-2 precursor [Equus caballus]
gi|67461054|sp|Q8HZI9.1|LAMC2_HORSE RecName: Full=Laminin subunit gamma-2; AltName: Full=Epiligrin
subunit gamma; AltName: Full=Kalinin subunit gamma;
AltName: Full=Laminin-5 subunit gamma; AltName:
Full=Nicein subunit gamma; Flags: Precursor
gi|24110903|gb|AAM03454.1| laminin 5 gamma 2 subunit [Equus caballus]
Length = 1190
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 78/118 (66%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CE+C+ +Y++ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELHKQTGNGFRCLNCNDNTDGIHCERCKAGFYRQRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGDRCDRCLPGFHTLTDAGCAQDQRLLDSKCDCDPAG 145
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGDRCDRCLPGFHTLTDAGCAQDQRLLDSKCDCDPAGI--- 146
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CDS G+C CK V G +C
Sbjct: 147 SGPCDS--GRCVCKPAVTGERC 166
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +C++C+ YY GD C ACNCNP+GS ++C S+G C
Sbjct: 537 GRCLKCIHNTAGVHCDQCKAGYY---GDPLAPNPADKCRACNCNPVGSEPVECRSDGSCV 593
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G C+ +
Sbjct: 594 CKPGFGGLSCEHAALT 609
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRPGYYHLDGGNPQGCTQCFC 189
>gi|431915938|gb|ELK16192.1| Laminin subunit gamma-2 [Pteropus alecto]
Length = 1229
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD++L+ +TG+G CL+C + DG +CE+CR+ +Y++ + C CNCN
Sbjct: 66 CDCNGKSRQCIFDRDLHRQTGNGFRCLNCNDNTDGIHCERCREGFYRQRERDRCLPCNCN 125
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C+ GRC CKPGV GD+CDRC + +AGC C+C+PAG
Sbjct: 126 SKGSLSARCDDSGRCSCKPGVMGDRCDRCLPGFHTLTDAGCTQDRRLPDSKCDCDPAG 183
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C+ GRC CKPGV GD+CDRC + +AGC C+C+PAG
Sbjct: 128 GSLSARCDDSGRCSCKPGVMGDRCDRCLPGFHTLTDAGCTQDRRLPDSKCDCDPAGI--- 184
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CD+ G+C CK V GA+C
Sbjct: 185 SGPCDT--GRCVCKPAVTGARC 204
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +C++C+ ++ GD C ACNCNP+GS ++C ++G C
Sbjct: 574 GRCLKCIHNTAGVHCDQCKAGFF---GDPLAPNPVDKCRACNCNPVGSEPVECRNDGSCI 630
Query: 77 CKPGVTGDKCDRCDV 91
CKPG G C+ +
Sbjct: 631 CKPGFGGLNCEHAAL 645
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG +CDRC +Y E GC C C
Sbjct: 191 GRCVCKPAVTGARCDRCRPGYYHLDEGNPEGCTQCFC 227
>gi|390339367|ref|XP_793438.3| PREDICTED: usherin [Strongylocentrotus purpuratus]
Length = 5278
Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats.
Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 67/283 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-NLQCN-SEGRCQCKPGV 81
G C C+ G C++CRD +Y + D C+ C+C+ G+ C+ + G+C CK V
Sbjct: 806 GQC-QCRPSSQGRTCDECRDGFYGLAADG-CSECDCDDAGTEPGAPCDKASGQCVCKANV 863
Query: 82 TGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQ-------------- 124
G +CD+C+ ++Y+ GC C CN G++ + CD+ GQ
Sbjct: 864 QGVRCDQCEASYYNLQASNSQGCSPCSCNTEGTISGSTVCDATTGQCVCKVNVLGRTCNT 923
Query: 125 ---------------CES-------AQLSSRGRVHTELRVQSRKNFDPAGNRIW-DLRRC 161
CES Q S G V + Q+ NR+ C
Sbjct: 924 CAPNTFGLEAANEDGCESCGCDATGTQTGSNGDVL--VCDQNSGQCSCLTNRLGRTCDIC 981
Query: 162 KRDTYPLGHGGSLNLQCNSE--------------GRCQCK---PGVTGDKCDRCDVNHYD 204
Y GG L C+ + G+CQC+ PG+TG +CD C +++
Sbjct: 982 DEGFYEPPSGGRGCLSCDCQPLSTEPSTFCDTLTGQCQCRLGSPGLTGRRCDGCMEEYFN 1041
Query: 205 FGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ + C C+C+P GS+ + CDS GQC+CKD V G +C
Sbjct: 1042 YNPSTGMCSPCDCDPRGSLNTS--CDSNTGQCDCKDLVTGRRC 1082
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 66/228 (28%), Positives = 96/228 (42%), Gaps = 31/228 (13%)
Query: 35 GPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDV 91
G C++C +Y + N C C CN GS ++ C+ S G+CQC+P G CD C
Sbjct: 765 GDKCDRCNFGFYNLAASNLFGCLPCGCNSDGSTSIYCDPSNGQCQCRPSSQGRTCDECRD 824
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC------ESAQLSSRGRVHTELRVQSR 145
Y GC C+C+ AG+ P CD GQC + + + L+ +
Sbjct: 825 GFYGLAADGCSECDCDDAGTEPGAP-CDKASGQCVCKANVQGVRCDQCEASYYNLQASNS 883
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYD 204
+ P C +T G ++ C+ + G+C CK V G C+ C N +
Sbjct: 884 QGCSP----------CSCNTEGTISGSTV---CDATTGQCVCKVNVLGRTCNTCAPNTFG 930
Query: 205 F---GEAGCKSCECNPAGSVKNTPN----CDSVKGQCECKDNVEGAQC 245
E GC+SC C+ G+ + CD GQC C N G C
Sbjct: 931 LEAANEDGCESCGCDATGTQTGSNGDVLVCDQNSGQCSCLTNRLGRTC 978
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 57/183 (31%), Positives = 79/183 (43%), Gaps = 42/183 (22%)
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
GDKCDRC+ Y+ + GC C CN GS + CD GQC+ + SS+GR E
Sbjct: 765 GDKCDRCNFGFYNLAASNLFGCLPCGCNSDGS--TSIYCDPSNGQCQ-CRPSSQGRTCDE 821
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN------------SEGRCQCK 187
C+ Y L G C+ + G+C CK
Sbjct: 822 ---------------------CRDGFYGLAADGCSECDCDDAGTEPGAPCDKASGQCVCK 860
Query: 188 PGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
V G +CD+C+ ++Y+ GC C CN G++ + CD+ GQC CK NV G
Sbjct: 861 ANVQGVRCDQCEASYYNLQASNSQGCSPCSCNTEGTISGSTVCDATTGQCVCKVNVLGRT 920
Query: 245 CRS 247
C +
Sbjct: 921 CNT 923
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 25/209 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN------LQCN-SEGR 74
G C+ C+ + G C C N + + + ++ C +C C+ G+ L C+ + G+
Sbjct: 908 GQCV-CKVNVLGRTCNTCAPNTFGLEAANEDGCESCGCDATGTQTGSNGDVLVCDQNSGQ 966
Query: 75 CQCKPGVTGDKCDRCDVNHYD--FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C G CD CD Y+ G GC SC+C P S + + CD++ GQC+ +L S
Sbjct: 967 CSCLTNRLGRTCDICDEGFYEPPSGGRGCLSCDCQPL-STEPSTFCDTLTGQCQ-CRLGS 1024
Query: 133 RGRVHTELR--VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPG 189
G ++ N++P+ C D GSLN C+S G+C CK
Sbjct: 1025 PGLTGRRCDGCMEEYFNYNPSTGMC---SPCDCDPR-----GSLNTSCDSNTGQCDCKDL 1076
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
VTG +CD C ++ + + + C PA
Sbjct: 1077 VTGRRCDTCQISSSNLQASNPQGCSKTPA 1105
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-SGDNFCTACNC 59
C C+ + + ++ + G C C +R G C+ C + +Y+ SG C +C+C
Sbjct: 942 CGCDATGTQTGSNGDVLVCDQNSGQC-SCLTNRLGRTCDICDEGFYEPPSGGRGCLSCDC 1000
Query: 60 NPIGSL-NLQCNS-EGRCQCK---PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSV 112
P+ + + C++ G+CQC+ PG+TG +CD C ++++ + C C+C+P GS+
Sbjct: 1001 QPLSTEPSTFCDTLTGQCQCRLGSPGLTGRRCDGCMEEYFNYNPSTGMCSPCDCDPRGSL 1060
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHT 138
+ CDS GQC+ L + R T
Sbjct: 1061 NTS--CDSNTGQCDCKDLVTGRRCDT 1084
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 65/219 (29%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCT 55
C C G ++ CF+++ L + G GG C +CQ + +G C++C + +++
Sbjct: 561 CQCYGHASSCFYNETLDVSPDRHDRGGGGVCSNCQDNTNGQQCDQCVEGFFK-------- 612
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
+ G D D+ C CEC+P G+V
Sbjct: 613 -------------------------LDGVPLDSTDI---------CNPCECSPNGTVAGD 638
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD-TYPLG--HGG 172
C+ V GQC +S GR + D N ++L + P G G
Sbjct: 639 LMCEEVNGQCNCKTYTS-GR-----------SCDTCQNGYYNLDASNPNGCEPCGCISAG 686
Query: 173 SLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA 208
++N + C+ + G C CK V GDKCDRC+ Y+ +
Sbjct: 687 TINSDISCHQQTGLCNCKDNVIGDKCDRCNFGFYNLAAS 725
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 175 NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSV 230
+L C G+C CK +G CD C +Y+ + GC+ C C AG++ + +C
Sbjct: 638 DLMCEEVNGQCNCKTYTSGRSCDTCQNGYYNLDASNPNGCEPCGCISAGTINSDISCHQQ 697
Query: 231 KGQCECKDNVEGAQC 245
G C CKDNV G +C
Sbjct: 698 TGLCNCKDNVIGDKC 712
Score = 46.2 bits (108), Expect = 0.013, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G +CD+C + C CEC+P G+V C+ V GQC CK
Sbjct: 594 CQDNTNGQQCDQCVEGFFKLDGVPLDSTDICNPCECSPNGTVAGDLMCEEVNGQCNCKTY 653
Query: 240 VEGAQC 245
G C
Sbjct: 654 TSGRSC 659
>gi|440908230|gb|ELR58274.1| Laminin subunit gamma-2, partial [Bos grunniens mutus]
Length = 1165
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 101/218 (46%), Gaps = 59/218 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ TG+G CL C + G +CE+C++ +Y+ + C CNCN
Sbjct: 2 CDCNGKSRQCIFDQELHRLTGNGFRCLHCSDNTGGIHCERCKEGFYRHRERDRCLPCNCN 61
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC
Sbjct: 62 SKGSLSPRCDNTGRCSCKPGVTGDRCDRCLPGFHTLTDAGC------------------- 102
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
Q RK D K D P G G C++
Sbjct: 103 ---------------------TQDRKLLD-----------SKCDCDPAGIAGP----CDT 126
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y GC C C
Sbjct: 127 -GRCVCKPAVTGERCDRCRPGYYHLDGRNPEGCTQCFC 163
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG
Sbjct: 64 GSLSPRCDNTGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDRKLLDSKCDCDPAGIAG- 122
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 123 --PCDT--GRCVCKPAVTGERC 140
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +C++C+ YY GD C ACNCNP+GS ++C S+G C
Sbjct: 510 GRCLKCLHNTTGAHCDQCKAGYY---GDPLAPNPADKCRACNCNPMGSEPMECRSDGSCV 566
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G CD +
Sbjct: 567 CKPGFDGLNCDHAALT 582
>gi|348543035|ref|XP_003458989.1| PREDICTED: laminin subunit gamma-1-like [Oreochromis niloticus]
Length = 631
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 117/235 (49%), Gaps = 34/235 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S C+FD ELY TGHGGHC +C + DGPNCE+C DNYY+ G + C C CN
Sbjct: 328 CECNGKSAECYFDAELYRATGHGGHCRNCADNTDGPNCERCLDNYYRDPGASRCLPCLCN 387
Query: 61 PIGSLNLQCN--SEGRCQCKPGV-TGDKCDRCDVNHY------DFGEAGCKS-----CEC 106
P+G C + G + +P + C+ C+ N + + G G + C C
Sbjct: 388 PVGYQGQHCEQCTVGYRRAQPELGPFSSCELCNCNGHSKTCNTNTGNGGVSTSQRAECNC 447
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS-RKNFDPAGNRIWDLRRCKRDT 165
NP GS CD V GQCE Q G LR + NF G + + C D
Sbjct: 448 NPIGSTNG--QCDIVTGQCE-CQPGVAG-----LRCERCETNF--FGFSVSGCKPCDCDP 497
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH-YDFGEAGCKS---CECN 216
GS++ QC +GRC+C+PG G +C C+ N+ Y+ GC+ CECN
Sbjct: 498 -----EGSVSGQCKEDGRCECRPGFVGARCGMCEENYFYNRSVPGCQQRLPCECN 547
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 42/63 (66%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S C+FD ELY TGHG HC +C + DGP CE+C DNYY+ G + C C CN
Sbjct: 544 CECNGKSAECYFDAELYQATGHGEHCRNCADNTDGPKCERCLDNYYRNPGASRCLPCLCN 603
Query: 61 PIG 63
P+G
Sbjct: 604 PVG 606
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 87/203 (42%), Gaps = 38/203 (18%)
Query: 57 CNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNCNPIGS N QC+ G+C+C+PGV G +C+RC+ N + F +GCK C+C+P GSV
Sbjct: 445 CNCNPIGSTNGQCDIVTGQCECQPGVAGLRCERCETNFFGFSVSGCKPCDCDPEGSVSGQ 504
Query: 116 ----------PNCDSVK-GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
P + G CE +R + R+ N A C D
Sbjct: 505 CKEDGRCECRPGFVGARCGMCEENYFYNRSVPGCQQRLPCECNGKSA--------ECYFD 556
Query: 165 T---YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAG- 219
GHG C G KC+RC N+Y + G + C C CNP G
Sbjct: 557 AELYQATGHGEHCR---------NCADNTDGPKCERCLDNYYRNPGASRCLPCLCNPVGM 607
Query: 220 ----SVKNTPNCDSVKGQCECKD 238
S++ P G +C D
Sbjct: 608 KMPSSMQWRPALKISAGVTQCTD 630
>gi|350589114|ref|XP_003130413.2| PREDICTED: laminin subunit gamma-2-like, partial [Sus scrofa]
Length = 1296
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 77/120 (64%), Gaps = 8/120 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ TG+G CL C + G +CEKC++ +Y++ + C CNCN
Sbjct: 133 CDCNGKSRQCLFDQELHRLTGNGFRCLHCSDNTAGIHCEKCKEGFYRQRERDRCLPCNCN 192
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSV 112
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG +
Sbjct: 193 SKGSLSARCDNAGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDQRLLDSKCDCDPAGIL 252
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG +
Sbjct: 195 GSLSARCDNAGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDQRLLDSKCDCDPAGILG- 253
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G C CK V G +C
Sbjct: 254 --PCDA--GHCVCKPAVTGERC 271
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +CE+C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 641 GRCLKCIHNTAGAHCEQCKVGYF---GDPLAPNPADKCRACNCNPVGSEPVACRSDGSCV 697
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G C+ +
Sbjct: 698 CKPGFGGLNCEHAALT 713
>gi|215276948|ref|NP_001135830.1| laminin subunit gamma-2 precursor [Ovis aries]
gi|213032419|emb|CAS03528.1| laminin 5 gamma 2 subunit [Ovis aries]
Length = 1191
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 8/120 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ TG+G CL C + G +CE+CR+ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELHRLTGNGFRCLHCSDNTGGIHCERCREGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSV 112
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG V
Sbjct: 88 SKGSLSPRCDNTGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDRKLLDSKCDCDPAGIV 147
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG V
Sbjct: 90 GSLSPRCDNTGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDRKLLDSKCDCDPAGIVG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDT--GRCVCKPAVTGERC 166
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +C++C+ YY GD C ACNCNP+GS ++C S+G C
Sbjct: 536 GRCLKCLYNTTGAHCDQCKAGYY---GDPLAPNPADKCRACNCNPMGSGPVECRSDGSCV 592
Query: 77 CKPGVTGDKCDRCDV 91
CKPG G CD +
Sbjct: 593 CKPGFDGLHCDHAAL 607
>gi|301777674|ref|XP_002924255.1| PREDICTED: Usherin-like, partial [Ailuropoda melanoleuca]
Length = 4564
Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats.
Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 28/241 (11%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SE 72
N+ GG C +C+ G C +C+ +Y ++S + C+ CNC+ G+++ + C+ +
Sbjct: 14 NKEQIGGQC-NCKRHVSGRQCNQCQTGFYNLRESDPDGCSPCNCSSSGTVDGDITCHQNS 72
Query: 73 GRCQCKPGVTGDKCDRCDVNH---YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
G+C+CK V G +CD C+ F GC+ C CN GSV C+ + GQCE +
Sbjct: 73 GQCKCKANVIGLRCDHCNFGFKFLRSFNADGCEPCLCNLHGSVNKL--CNPLSGQCECKK 130
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN-LQCNSE-GRCQCK 187
+ + T R++F G I + C D GSL+ C+++ G+C CK
Sbjct: 131 EAKGLQCDT-----CREHF--YGLDITSCKACDCDM-----AGSLSGTVCDAKTGQCVCK 178
Query: 188 PGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
P V G +C+ C ++ + C C C+ G+V + CD GQC CK V G
Sbjct: 179 PSVGGRQCNECLEGYFYLQQNNSFLCLPCNCDKTGTVHGSLLCDKSTGQCPCKLGVTGLH 238
Query: 245 C 245
C
Sbjct: 239 C 239
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSL--NLQCN-SEGRCQCK 78
G C+ C+ G C +C + Y+ Q++ C CNC+ G++ +L C+ S G+C CK
Sbjct: 173 GQCV-CKPSVGGRQCNECLEGYFYLQQNNSFLCLPCNCDKTGTVHGSLLCDKSTGQCPCK 231
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG C++C + Y+ GC+ CEC+ G++ T CD + GQC R
Sbjct: 232 LGVTGLHCNQCAPHRYNLTSGNFQGCQMCECDSLGTLPGTI-CDPISGQCLCLPNRQGRR 290
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK-PGVTGD 193
+ R Q P GN L T G+++ C+S G+C C+ + G
Sbjct: 291 CN---RCQPGFYISP-GNAPGCLPCSCHVT------GAVHHICDSLTGQCICQDSSIAGQ 340
Query: 194 KCDRCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD C ++ F C+ C C+ +G++ T C V GQC CK V G++C
Sbjct: 341 SCDHCRDLYFGFDPQTGRCQHCNCHLSGALNET--CHLVTGQCFCKRFVTGSKC 392
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 95/221 (42%), Gaps = 30/221 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKP 79
G C C+ G +C +C + Y + NF C C C+ +G+L C+ G+C C P
Sbjct: 226 GQC-PCKLGVTGLHCNQCAPHRYNLTSGNFQGCQMCECDSLGTLPGTICDPISGQCLCLP 284
Query: 80 GVTGDKCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
G +C+RC Y G A GC C C+ G+V + CDS+ GQC S G+
Sbjct: 285 NRQGRRCNRCQPGFYISPGNAPGCLPCSCHVTGAVHHI--CDSLTGQCICQDSSIAGQSC 342
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCD 196
R FDP R C+ L G+LN C+ G+C CK VTG KCD
Sbjct: 343 DHCR-DLYFGFDPQTGR------CQHCNCHLS--GALNETCHLVTGQCFCKRFVTGSKCD 393
Query: 197 RC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C +H D E NP G K +GQ +
Sbjct: 394 TCVPRASHLD---------ENNPLGCSKTPSQQPPPRGQAQ 425
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G +C+ CRD Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 328 GQCICQDSSIAGQSCDHCRDLYFGFDPQTGR--CQHCNCHLSGALNETCHLVTGQCFCKR 385
Query: 80 GVTGDKCDRC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
VTG KCD C +H D E NP G K +GQ +S+
Sbjct: 386 FVTGSKCDTCVPRASHLD---------ENNPLGCSKTPSQQPPPRGQAQSS 427
>gi|34230|emb|CAA78728.1| Laminin [Homo sapiens]
Length = 1193
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNSNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|157419138|ref|NP_005553.2| laminin subunit gamma-2 isoform a precursor [Homo sapiens]
gi|90185107|sp|Q13753.2|LAMC2_HUMAN RecName: Full=Laminin subunit gamma-2; AltName:
Full=Cell-scattering factor 140 kDa subunit; Short=CSF
140 kDa subunit; AltName: Full=Epiligrin subunit gamma;
AltName: Full=Kalinin subunit gamma; AltName:
Full=Kalinin/nicein/epiligrin 100 kDa subunit; AltName:
Full=Ladsin 140 kDa subunit; AltName: Full=Laminin B2t
chain; AltName: Full=Laminin-5 subunit gamma; AltName:
Full=Large adhesive scatter factor 140 kDa subunit;
AltName: Full=Nicein subunit gamma; Flags: Precursor
gi|119611553|gb|EAW91147.1| laminin, gamma 2, isoform CRA_b [Homo sapiens]
Length = 1193
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|426332998|ref|XP_004028075.1| PREDICTED: laminin subunit gamma-2 [Gorilla gorilla gorilla]
Length = 1193
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS ++C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVECRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
>gi|1236323|gb|AAC50457.1| laminin gamma2 chain [Homo sapiens]
gi|1588296|prf||2208311B laminin:SUBUNIT=gamma2
Length = 1193
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|397489308|ref|XP_003815672.1| PREDICTED: laminin subunit gamma-2 [Pan paniscus]
Length = 1193
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLPDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLPDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 18/88 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
CKPG G C+ GE C +C
Sbjct: 593 CKPGFGGPNCEH--------GEFSCPAC 612
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDQLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|452755|emb|CAA52108.1| nicein [Homo sapiens]
gi|740962|prf||2006240A nicein:SUBUNIT=100kD
Length = 1193
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
>gi|34232|emb|CAA78729.1| Laminin [Homo sapiens]
Length = 1111
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNSNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
>gi|1280520|gb|AAC50456.1| alternatively spliced laminin gamma2 chain [Homo sapiens]
gi|1588295|prf||2208311A laminin:SUBUNIT=gamma2
Length = 1111
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|157419140|ref|NP_061486.2| laminin subunit gamma-2 isoform b precursor [Homo sapiens]
gi|109730447|gb|AAI13379.1| Laminin, gamma 2 [Homo sapiens]
gi|119611552|gb|EAW91146.1| laminin, gamma 2, isoform CRA_a [Homo sapiens]
Length = 1111
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|85566965|gb|AAI12287.1| Laminin, gamma 2 [Homo sapiens]
Length = 1111
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLMDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLMDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|281344902|gb|EFB20486.1| hypothetical protein PANDA_013562 [Ailuropoda melanoleuca]
Length = 4540
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 28/236 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQC 77
GG C +C+ G C +C+ +Y ++S + C+ CNC+ G+++ + C+ + G+C+C
Sbjct: 2 GGQC-NCKRHVSGRQCNQCQTGFYNLRESDPDGCSPCNCSSSGTVDGDITCHQNSGQCKC 60
Query: 78 KPGVTGDKCDRCDVNH---YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G +CD C+ F GC+ C CN GSV C+ + GQCE + +
Sbjct: 61 KANVIGLRCDHCNFGFKFLRSFNADGCEPCLCNLHGSVNKL--CNPLSGQCECKKEAKGL 118
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN-LQCNSE-GRCQCKPGVTG 192
+ T R++F G I + C D GSL+ C+++ G+C CKP V G
Sbjct: 119 QCDT-----CREHF--YGLDITSCKACDCDM-----AGSLSGTVCDAKTGQCVCKPSVGG 166
Query: 193 DKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+ C ++ + C C C+ G+V + CD GQC CK V G C
Sbjct: 167 RQCNECLEGYFYLQQNNSFLCLPCNCDKTGTVHGSLLCDKSTGQCPCKLGVTGLHC 222
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSL--NLQCN-SEGRCQCK 78
G C+ C+ G C +C + Y+ Q++ C CNC+ G++ +L C+ S G+C CK
Sbjct: 156 GQCV-CKPSVGGRQCNECLEGYFYLQQNNSFLCLPCNCDKTGTVHGSLLCDKSTGQCPCK 214
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG C++C + Y+ GC+ CEC+ G++ T CD + GQC R
Sbjct: 215 LGVTGLHCNQCAPHRYNLTSGNFQGCQMCECDSLGTLPGTI-CDPISGQCLCLPNRQGRR 273
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK-PGVTGD 193
+ R Q P GN L T G+++ C+S G+C C+ + G
Sbjct: 274 CN---RCQPGFYISP-GNAPGCLPCSCHVT------GAVHHICDSLTGQCICQDSSIAGQ 323
Query: 194 KCDRCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD C ++ F C+ C C+ +G++ T C V GQC CK V G++C
Sbjct: 324 SCDHCRDLYFGFDPQTGRCQHCNCHLSGALNET--CHLVTGQCFCKRFVTGSKC 375
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 95/221 (42%), Gaps = 30/221 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKP 79
G C C+ G +C +C + Y + NF C C C+ +G+L C+ G+C C P
Sbjct: 209 GQC-PCKLGVTGLHCNQCAPHRYNLTSGNFQGCQMCECDSLGTLPGTICDPISGQCLCLP 267
Query: 80 GVTGDKCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
G +C+RC Y G A GC C C+ G+V + CDS+ GQC S G+
Sbjct: 268 NRQGRRCNRCQPGFYISPGNAPGCLPCSCHVTGAVHHI--CDSLTGQCICQDSSIAGQSC 325
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCD 196
R FDP R C+ L G+LN C+ G+C CK VTG KCD
Sbjct: 326 DHCR-DLYFGFDPQTGR------CQHCNCHLS--GALNETCHLVTGQCFCKRFVTGSKCD 376
Query: 197 RC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C +H D E NP G K +GQ +
Sbjct: 377 TCVPRASHLD---------ENNPLGCSKTPSQQPPPRGQAQ 408
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G +C+ CRD Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 311 GQCICQDSSIAGQSCDHCRDLYFGFDPQTGR--CQHCNCHLSGALNETCHLVTGQCFCKR 368
Query: 80 GVTGDKCDRC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
VTG KCD C +H D E NP G K +GQ +S+
Sbjct: 369 FVTGSKCDTCVPRASHLD---------ENNPLGCSKTPSQQPPPRGQAQSS 410
>gi|149058393|gb|EDM09550.1| lamimin, gamma 2 [Rattus norvegicus]
Length = 930
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 105/218 (48%), Gaps = 59/218 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + G +CE+CR+ +Y++ + C CNC+
Sbjct: 28 CDCNGKSRQCVFDQELHRQTGNGFRCLNCNDNTAGVHCERCREGFYRQRDRDRCLPCNCH 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL C++ G+C+CKPGV G +CDRC + +AGC
Sbjct: 88 SKGSLGAGCDNSGQCRCKPGVVGQRCDRCQPGFHMLTDAGC------------------- 128
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+ ++ S+ + DPAG ++ C+S
Sbjct: 129 ---------------TRDQRQLDSKCDCDPAG---------------------ISGPCDS 152
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG++CDRC +Y A GC C C
Sbjct: 153 -GRCVCKPAVTGERCDRCRAGYYHLDRANPEGCTQCFC 189
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GSL C++ G+C+CKPGV G +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLGAGCDNSGQCRCKPGVVGQRCDRCQPGFHMLTDAGCTRDQRQLDSKCDCDPAGI--- 146
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CDS G+C CK V G +C
Sbjct: 147 SGPCDS--GRCVCKPAVTGERC 166
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS +C S+G C
Sbjct: 536 GRCLKCIYNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPVGSEPGECRSDGSCV 592
Query: 77 CKPGVTGDKC 86
CKPG G C
Sbjct: 593 CKPGFGGLNC 602
>gi|194384666|dbj|BAG59493.1| unnamed protein product [Homo sapiens]
Length = 1010
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|119908663|ref|XP_588297.3| PREDICTED: laminin subunit gamma-2 [Bos taurus]
gi|297484377|ref|XP_002694254.1| PREDICTED: laminin subunit gamma-2 [Bos taurus]
gi|296478939|tpg|DAA21054.1| TPA: laminin, gamma 2-like [Bos taurus]
Length = 1191
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 8/120 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ TG+G CL C + G +CE+C++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELHRLTGNGFRCLHCSDNTGGIHCERCKEGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSV 112
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG V
Sbjct: 88 SKGSLSPRCDNTGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDRKLLDSKCDCDPAGIV 147
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG V
Sbjct: 90 GSLSPRCDNTGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDRKLLDSKCDCDPAGIVG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDT--GRCVCKPAVTGERC 166
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +C++C+ YY GD C ACNCNP+GS ++C S+G C
Sbjct: 536 GRCLKCLHNTTGAHCDQCKAGYY---GDPLAPNPADKCRACNCNPMGSEPVECRSDGSCV 592
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G CD +
Sbjct: 593 CKPGFDGLNCDHAALT 608
>gi|334321820|ref|XP_001375368.2| PREDICTED: laminin subunit gamma-2 [Monodelphis domestica]
Length = 1190
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 11/141 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL RTG G C++C + G +CE+C+D +Y++ + C C+CN
Sbjct: 27 CDCNGKSRQCVFDQELQRRTGKGFRCVNCNDNTAGVHCERCKDGFYRQRDRDRCLPCHCN 86
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK--------SCECNPAGSV 112
GSL +C++ GRC CK GV GDKCDRC + EAGC C+C+P GS
Sbjct: 87 TKGSLASRCDNHGRCSCKSGVMGDKCDRCQPGFHTLTEAGCARNRQLRGPKCDCDPTGS- 145
Query: 113 KNTPNCDSVKGQCESAQLSSR 133
T NCDS + C+++ R
Sbjct: 146 --TGNCDSGRCVCKASVTGER 164
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK--------SCECNPAGSVKN 223
GSL +C++ GRC CK GV GDKCDRC + EAGC C+C+P GS
Sbjct: 89 GSLASRCDNHGRCSCKSGVMGDKCDRCQPGFHTLTEAGCARNRQLRGPKCDCDPTGS--- 145
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
T NCDS G+C CK +V G +C
Sbjct: 146 TGNCDS--GRCVCKASVTGERC 165
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C + G +C++C++ ++ + + C ACNCN +GS C S+G C CKP
Sbjct: 535 GECLKCTYNTAGFHCDRCKEGFFGNPLATNPADKCRACNCNSVGSEPQGCRSDGSCICKP 594
Query: 80 GVTGDKCD 87
G G CD
Sbjct: 595 GFGGIHCD 602
>gi|354481444|ref|XP_003502911.1| PREDICTED: laminin subunit gamma-2 [Cricetulus griseus]
Length = 1253
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 106/218 (48%), Gaps = 59/218 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + G +CE+CR+ +Y+ + C CNC+
Sbjct: 89 CDCNGKSRQCIFDQELHRQTGNGFRCLNCNDNTAGAHCERCREGFYRHRERDRCLPCNCH 148
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+ C++ G+C+CKPGVTG +CDRC +
Sbjct: 149 PKGSLSAGCDNSGQCRCKPGVTGPRCDRCQPGFH-------------------------- 182
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
L+ G + ++ S+ + DPAG ++ C+S
Sbjct: 183 --------MLTDAGCTQDQRQLDSKCDCDPAG---------------------ISGPCDS 213
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG++CDRC +Y A GC C C
Sbjct: 214 -GRCVCKPAVTGERCDRCRPGYYHLDRANPEGCTQCFC 250
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ C++ G+C+CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 151 GSLSAGCDNSGQCRCKPGVTGPRCDRCQPGFHMLTDAGCTQDQRQLDSKCDCDPAGI--- 207
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CDS G+C CK V G +C
Sbjct: 208 SGPCDS--GRCVCKPAVTGERC 227
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS +C S+G C
Sbjct: 597 GRCLKCIYNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSAPGECRSDGSCV 653
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G C+ +
Sbjct: 654 CKPGFGGLNCELAALT 669
>gi|358255034|dbj|GAA56722.1| laminin gamma 1, partial [Clonorchis sinensis]
Length = 2041
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 77/128 (60%), Gaps = 3/128 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-KSGDNFCTACNC 59
C CNG S C FD +LY++TG G C+ C + +G NCE+C+ Y+ C C+C
Sbjct: 188 CKCNGNSQLCEFDLDLYDQTGSGSRCIGCGNNTEGINCERCKTGYFPDPVYPTVCQPCSC 247
Query: 60 NPIGSLNLQ--CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
+P+G+++ Q C + G+C+CKPGV G +CDRC +HY F GC C C+ G + N
Sbjct: 248 DPVGTVDSQEDCATTGQCRCKPGVGGPRCDRCLEDHYGFSAGGCLPCNCSTVGGLDNRAV 307
Query: 118 CDSVKGQC 125
CD+ GQC
Sbjct: 308 CDAQTGQC 315
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 104/222 (46%), Gaps = 38/222 (17%)
Query: 14 KELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ------KSGDNF-----CTACNCNPI 62
+E N G G CL C G +CEKC Y + ++G+ C+ C+CNP+
Sbjct: 597 REFGNCDGITGECLKCIFGTTGKHCEKCLPGYRRNFKPATETGEALVPARGCSPCHCNPV 656
Query: 63 GSLNLQ-------CNSE-GRCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSV 112
G+L CN E G+C CKPGV G +CD+C Y F GE GCK C+C+ G++
Sbjct: 657 GTLASYGQSGIGVCNPETGQCPCKPGVGGLRCDKCYPGFYGFRTGE-GCKPCDCDSIGAI 715
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHG 171
CD G C S + GR + P + C + +P
Sbjct: 716 GEA--CDDHTGSC-SCRPYVTGRQCDQCL--------PGYFNLTSTHGCMACNCHPY--- 761
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
G+ + QC+ G+C+CKP G KCD+C NHY+ E GC C
Sbjct: 762 GAEDRQCDKTGQCKCKPFAVGKKCDQCQENHYNL-EVGCLPC 802
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 108/246 (43%), Gaps = 36/246 (14%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ----------- 76
+CQ + G C++C D YY + +A C P C S +C+
Sbjct: 500 ECQDNTGGLFCDRCADGYYGNAFAPVGSADACKPC-----PCPSGTKCEQVHWPDQTIKV 554
Query: 77 ----CKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C G +C+RC N+Y G CK C+C+ + NCD + G+C
Sbjct: 555 VCTDCPDNRAGVRCERCAENYYGDPSKGIPCKPCDCSGNVDPREFGNCDGITGECLKCIF 614
Query: 131 SSRGRVHTELRVQSRKNFDPA---GNRIWDLRRCKR-DTYPLG----HGGSLNLQCNSE- 181
+ G+ + R+NF PA G + R C P+G +G S CN E
Sbjct: 615 GTTGKHCEKCLPGYRRNFKPATETGEALVPARGCSPCHCNPVGTLASYGQSGIGVCNPET 674
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C CKPGV G +CD+C Y F GE GCK C+C+ G++ CD G C C+
Sbjct: 675 GQCPCKPGVGGLRCDKCYPGFYGFRTGE-GCKPCDCDSIGAIGEA--CDDHTGSCSCRPY 731
Query: 240 VEGAQC 245
V G QC
Sbjct: 732 VTGRQC 737
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 42/68 (61%)
Query: 178 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
C + G+C+CKPGV G +CDRC +HY F GC C C+ G + N CD+ GQC CK
Sbjct: 259 CATTGQCRCKPGVGGPRCDRCLEDHYGFSAGGCLPCNCSTVGGLDNRAVCDAQTGQCLCK 318
Query: 238 DNVEGAQC 245
NV G QC
Sbjct: 319 QNVGGKQC 326
>gi|114568350|ref|XP_001162731.1| PREDICTED: laminin subunit gamma-2 isoform 1 [Pan troglodytes]
gi|410220114|gb|JAA07276.1| laminin, gamma 2 [Pan troglodytes]
Length = 1193
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ G+C CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGQCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLPDSKCDCDPAG 145
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ G+C CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGQCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLPDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 18/88 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
CKPG G C+ GE C +C
Sbjct: 593 CKPGFGGPNCEH--------GEFSCPAC 612
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDQLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|410294892|gb|JAA26046.1| laminin, gamma 2 [Pan troglodytes]
Length = 1193
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ G+C CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGQCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLPDSKCDCDPAG 145
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ G+C CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGQCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLPDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 18/88 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
CKPG G C+ GE C +C
Sbjct: 593 CKPGFGGPNCEH--------GEFSCPAC 612
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDQLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|27808666|sp|Q61092.2|LAMC2_MOUSE RecName: Full=Laminin subunit gamma-2; AltName: Full=Epiligrin
subunit gamma; AltName: Full=Kalinin subunit gamma;
AltName: Full=Kalinin/nicein/epiligrin 100 kDa subunit;
AltName: Full=Laminin B2t chain; AltName: Full=Laminin-5
subunit gamma; AltName: Full=Nicein subunit gamma;
Flags: Precursor
gi|18921414|gb|AAA85256.2| laminin gamma 2 chain precursor [Mus musculus]
Length = 1191
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 106/218 (48%), Gaps = 59/218 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG G CL+C + G +CE+CR+ +Y+ + C CNC+
Sbjct: 28 CDCNGKSRQCVFDQELHRQTGSGFRCLNCNDNTAGVHCERCREGFYRHRDRDRCLPCNCH 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+ C++ G+C+CKPGVTG +CDRC + +AG C
Sbjct: 88 SKGSLSAGCDNSGQCRCKPGVTGQRCDRCQPGFHMLTDAG-----------------CTR 130
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+GQ +S + + DPAG ++ C+S
Sbjct: 131 DQGQLDS-----------------KCDCDPAG---------------------ISGPCDS 152
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG++CDRC +Y A GC C C
Sbjct: 153 -GRCVCKPAVTGERCDRCRPGYYHLDRANPEGCTQCFC 189
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GSL+ C++ G+C+CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSAGCDNSGQCRCKPGVTGQRCDRCQPGFHMLTDAGCTRDQGQLDSKCDCDPAGI--- 146
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CDS G+C CK V G +C
Sbjct: 147 SGPCDS--GRCVCKPAVTGERC 166
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNC+P+GS +C +G C
Sbjct: 536 GRCLKCIYNTAGVYCDQCKAGYF---GDPLAPNPADKCRACNCSPMGSEPGECRGDGSCV 592
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G CD +
Sbjct: 593 CKPGFGGLNCDHAALT 608
>gi|410266922|gb|JAA21427.1| laminin, gamma 2 [Pan troglodytes]
Length = 1193
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ G+C CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGQCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLPDSKCDCDPAG 145
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ G+C CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGQCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLPDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 18/88 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
CKPG G C+ GE C +C
Sbjct: 593 CKPGFGGPNCEH--------GEFSCPAC 612
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDQLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
>gi|297662524|ref|XP_002809752.1| PREDICTED: laminin subunit gamma-2 [Pongo abelii]
Length = 1059
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 76/118 (64%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CE+C+D +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELHRQTGNGFRCLNCNDNTDGIHCERCKDGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ G C CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGWCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ G C CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGWCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS ++C S+G C
Sbjct: 402 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVECRSDGTCV 458
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 459 CKPGFGGPNCE 469
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
>gi|110624798|ref|NP_032511.3| laminin subunit gamma-2 precursor [Mus musculus]
gi|147898089|gb|AAI40418.1| Laminin, gamma 2 [synthetic construct]
gi|148707497|gb|EDL39444.1| laminin, gamma 2 [Mus musculus]
Length = 1193
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 106/218 (48%), Gaps = 59/218 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG G CL+C + G +CE+CR+ +Y+ + C CNC+
Sbjct: 28 CDCNGKSRQCVFDQELHRQTGSGFRCLNCNDNTAGVHCERCREGFYRHRDRDRCLPCNCH 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+ C++ G+C+CKPGVTG +CDRC + +AG C
Sbjct: 88 SKGSLSAGCDNSGQCRCKPGVTGQRCDRCQPGFHMLTDAG-----------------CTR 130
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+GQ +S + + DPAG ++ C+S
Sbjct: 131 DQGQLDS-----------------KCDCDPAG---------------------ISGPCDS 152
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG++CDRC +Y A GC C C
Sbjct: 153 -GRCVCKPAVTGERCDRCRPGYYHLDRANPEGCTQCFC 189
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GSL+ C++ G+C+CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSAGCDNSGQCRCKPGVTGQRCDRCQPGFHMLTDAGCTRDQGQLDSKCDCDPAGI--- 146
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CDS G+C CK V G +C
Sbjct: 147 SGPCDS--GRCVCKPAVTGERC 166
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNC+P+GS +C +G C
Sbjct: 536 GRCLKCIYNTAGVYCDQCKAGYF---GDPLAPNPADKCRACNCSPMGSEPGECRGDGSCV 592
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G CD +
Sbjct: 593 CKPGFGGLNCDHAALT 608
>gi|313225620|emb|CBY07094.1| unnamed protein product [Oikopleura dioica]
Length = 1487
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 6/125 (4%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG ++ C +D EL GHG CL+CQ + GP C +C ++++ + N C CNC+
Sbjct: 192 CECNGRADECVYDSEL----GHG-RCLNCQDNTAGPKCAECAKDHFRDAAGN-CVPCNCS 245
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
G+ + QC++ G+C CK GV GD+CD+C + G GC+SC+CN AG ++N+P+CD
Sbjct: 246 EDGANSSQCDASGKCSCKFGVEGDQCDKCKPQFFGLGRGGCQSCQCNSAGCLENSPSCDP 305
Query: 121 VKGQC 125
V GQC
Sbjct: 306 VTGQC 310
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 53/74 (71%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
G+ + QC++ G+C CK GV GD+CD+C + G GC+SC+CN AG ++N+P+CD V
Sbjct: 248 GANSSQCDASGKCSCKFGVEGDQCDKCKPQFFGLGRGGCQSCQCNSAGCLENSPSCDPVT 307
Query: 232 GQCECKDNVEGAQC 245
GQC CKDNV G +C
Sbjct: 308 GQCACKDNVAGQKC 321
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 106/256 (41%), Gaps = 73/256 (28%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKPGV 81
C DC G CEKC+ +++ GD C CNCN N++ G C GV
Sbjct: 644 CFDCPSGSTGNRCEKCQTDFF---GDPLNGRPCQKCNCNG----NMEPGVPGNCD---GV 693
Query: 82 TGD-----------KCDRCDVNHY--------DFGEAGCKSCECNPAGSVKNTPNCDSVK 122
TG+ C C++ Y + G GCK+C CNP G+ NC+
Sbjct: 694 TGECKKCLHYTKGYNCQACELGTYGNPLASSQEQGWKGCKNCGCNPDGTKAGDDNCNQDD 753
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------- 171
GQC+ + G H E+ C Y GHG
Sbjct: 754 GQCKCK--NGVGGKHCEI--------------------CLEGYY--GHGEEEGCLECGCD 789
Query: 172 --GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
GS++ QC+ G C C+PGV G KCD C + GC +C+C+P GS+ CD
Sbjct: 790 ALGSISDQCDDSGVCSCQPGVYGAKCDSCMPGFFGLSSEGCAACDCSPDGSL--DAQCDE 847
Query: 230 VKGQCECKDNVEGAQC 245
G C CK+ VEG +C
Sbjct: 848 -DGICFCKEGVEGDKC 862
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
CQ G C+ C ++ S + C AC+C+P GSL+ QC+ +G C CK GV GDKCD+
Sbjct: 806 CQPGVYGAKCDSCMPGFFGLSSEG-CAACDCSPDGSLDAQCDEDGICFCKEGVEGDKCDK 864
Query: 89 CDVNHYDFGEAGCKSC----------------ECN----PAGSVKNTPNCDSVKGQCESA 128
C NH+ + GCK C E N A +++N+P GQ + A
Sbjct: 865 CARNHFYEKDKGCKKCDNCYNLVEFEYNKHQDELNRLRRAAETIQNSPKMLRSDGQFDEA 924
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
LS+ R +L ++ I +L
Sbjct: 925 -LSNLQRDSEDLEFKAEDILTDYKQMIKEL 953
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
GSL+ QC+ +G C CK GV GDKCD+C NH+ + GCK C+
Sbjct: 839 GSLDAQCDEDGICFCKEGVEGDKCDKCARNHFYEKDKGCKKCD 881
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 104/256 (40%), Gaps = 62/256 (24%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSL--NLQCNSEGRCQ------- 76
C + G +CE C D ++ S D C C C P G+ + +EG +
Sbjct: 587 CLHNTKGSSCEMCADGFFGNSLDGTKSDCQKCPC-PEGATCAQTKLIAEGGAESSDVTCF 645
Query: 77 -CKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C G TG++C++C + + G C+ C CN NCD V G+C+ ++
Sbjct: 646 DCPSGSTGNRCEKCQTDFFGDPLNGRPCQKCNCNGNMEPGVPGNCDGVTGECKKCLHYTK 705
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL------GHGGSLNLQCN------ 179
G ++ + C+ TY PL G G N CN
Sbjct: 706 G---------------------YNCQACELGTYGNPLASSQEQGWKGCKNCGCNPDGTKA 744
Query: 180 -------SEGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVK 231
+G+C+CK GV G C+ C +Y G E GC C C+ GS+ + CD
Sbjct: 745 GDDNCNQDDGQCKCKNGVGGKHCEICLEGYYGHGEEEGCLECGCDALGSISD--QCDD-S 801
Query: 232 GQCECKDNVEGAQCRS 247
G C C+ V GA+C S
Sbjct: 802 GVCSCQPGVYGAKCDS 817
>gi|332230514|ref|XP_003264437.1| PREDICTED: laminin subunit gamma-2 [Nomascus leucogenys]
Length = 1160
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 69/101 (68%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ TG+G CL+C + DG +CE+C+D +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELHRHTGNGFRCLNCNDNTDGIHCERCKDGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 101
GSL+ QC++ GRC CKPGVTG +CDRC + +AGC
Sbjct: 88 SKGSLSAQCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGC 128
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS +C S+G C
Sbjct: 503 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPAECRSDGTCV 559
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 560 CKPGFGGPNCE 570
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
GSL+ QC++ GRC CKPGVTG +CDRC + +AGC
Sbjct: 90 GSLSAQCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGC 128
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 451 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 510
Query: 239 NVEGAQC 245
N G C
Sbjct: 511 NTAGIYC 517
>gi|395530960|ref|XP_003767552.1| PREDICTED: laminin subunit gamma-2 [Sarcophilus harrisii]
Length = 1204
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 82/133 (61%), Gaps = 14/133 (10%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL RTG G CL+C + G +CE+C+D +Y+ + C CNCN
Sbjct: 42 CDCNGKSRQCVFDQELQRRTGKGFRCLNCNDNTAGVHCERCKDGFYRLRDRDRCLPCNCN 101
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSV 112
GSL+ +C++ GRC CKPGV GD+CD+C + EAGC C+C+P GS
Sbjct: 102 TKGSLSSRCDNHGRCNCKPGVMGDRCDQCQPG-FTLTEAGCSRNRQLKDSKCDCDPVGS- 159
Query: 113 KNTPNCDSVKGQC 125
T +CDS GQC
Sbjct: 160 --TGSCDS--GQC 168
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 14/82 (17%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GSL+ +C++ GRC CKPGV GD+CD+C + EAGC C+C+P GS
Sbjct: 104 GSLSSRCDNHGRCNCKPGVMGDRCDQCQPG-FTLTEAGCSRNRQLKDSKCDCDPVGS--- 159
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
T +CDS GQC CK +V G +C
Sbjct: 160 TGSCDS--GQCVCKASVTGERC 179
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C + G +C++C++ Y+ + + C ACNCN +GS +C S+G C CKP
Sbjct: 549 GECLKCIYNTAGFHCDQCKEGYFGNPLATNPADKCRACNCNSVGSEPQRCRSDGSCICKP 608
Query: 80 GVTGDKCD 87
G G CD
Sbjct: 609 GFGGVSCD 616
>gi|326676914|ref|XP_002667166.2| PREDICTED: laminin subunit alpha-2-like, partial [Danio rerio]
Length = 762
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 119/258 (46%), Gaps = 50/258 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C+ G +CE+C D Y+ GD C AC C+ GS++ C+ E G+CQC+
Sbjct: 89 GACLRCREGYGGADCERCADGYF---GDALIAKNCQACQCHSNGSVSELCHQETGQCQCR 145
Query: 79 PGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDS----------VKGQCES 127
V G +CD C N + GE+ C+ CECN GSV CDS V +CE
Sbjct: 146 QHVIGRQCDECMPNCWWDGESQRCRPCECNVRGSVSQ--RCDSEGRCVCRAGFVGRRCEL 203
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR-CKRDTYPLGHGGSLNLQ--------- 177
+ R T VQ + W+ R C R Y G G +LQ
Sbjct: 204 MR-PPHNRRETRRPVQ---QVPIQHVQRWESRGGCPRGAYRPGTGAGSHLQGALGCVPCH 259
Query: 178 ----------CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
C+ G+C+C+PGVTG KCDRC H+ F E GC C+C G+ NC
Sbjct: 260 CNSFGSKSFDCDESGQCRCQPGVTGQKCDRCAAGHFSFQEGGCTPCQCAHVGN-----NC 314
Query: 228 DSVKGQCECKDNVEGAQC 245
D+ GQC C N G +C
Sbjct: 315 DASTGQCICPPNTVGERC 332
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 100/205 (48%), Gaps = 36/205 (17%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C C+CN GS + C+ G+C+C+PGVTG KCDRC H+ F E GC C+C G+
Sbjct: 255 CVPCHCNSFGSKSFDCDESGQCRCQPGVTGQKCDRCAAGHFSFQEGGCTPCQCAHVGN-- 312
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW--DLRR-CKRDTYPLG- 169
NCD+ GQC + R D W D+ CK P G
Sbjct: 313 ---NCDASTGQCICPPNTVGERC------------DKCAPNHWGHDISTGCK----PCGC 353
Query: 170 -HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN- 226
GS+ QCN + G C C+ G+KCD C + + DF + C SC+C+ AGS +T +
Sbjct: 354 NALGSVAQQCNLNTGCCMCREQFRGEKCDECKLGYRDFPQ--CISCQCSAAGSSLDTCDS 411
Query: 227 ------CDSVKGQCECKDNVEGAQC 245
C GQC CK NVEG +C
Sbjct: 412 ESGLCACADRSGQCSCKANVEGQKC 436
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C+KC N++ C C CN +GS+ QCN + G C C+
Sbjct: 319 GQCI-CPPNTVGERCDKCAPNHWGHDISTGCKPCGCNALGSVAQQCNLNTGCCMCREQFR 377
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+KCD C + + DF + C SC+C+ AGS +T CDS G C A S
Sbjct: 378 GEKCDECKLGYRDFPQ--CISCQCSAAGSSLDT--CDSESGLCACADRS 422
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 94/265 (35%), Gaps = 75/265 (28%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C N + C C CN GS++ +C+SEGRC C+ G G +C+
Sbjct: 144 CRQHVIGRQCDECMPNCWWDGESQRCRPCECNVRGSVSQRCDSEGRCVCRAGFVGRRCEL 203
Query: 89 CDVNH---------------------------------------YDFGEAGCKSCECNPA 109
H + G GC C CN
Sbjct: 204 MRPPHNRRETRRPVQQVPIQHVQRWESRGGCPRGAYRPGTGAGSHLQGALGCVPCHCNSF 263
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS + +CD GQC R Q G RC +
Sbjct: 264 GS--KSFDCDE-SGQC---------------RCQ-------PGVTGQKCDRCAAGHFSFQ 298
Query: 170 HGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGS 220
GG QC S G+C C P G++CD+C NH+ GCK C CN GS
Sbjct: 299 EGGCTPCQCAHVGNNCDASTGQCICPPNTVGERCDKCAPNHWGHDISTGCKPCGCNALGS 358
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
V C+ G C C++ G +C
Sbjct: 359 VAQ--QCNLNTGCCMCREQFRGEKC 381
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 41/187 (21%)
Query: 76 QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
+C PG TG +CDRC ++ + C+ C C+ +CD + G C
Sbjct: 39 RCPPGYTGSRCDRCSNGYFGRPNIPGGSCQPCVCSGNLDQTAPLSCDPLTGAC------- 91
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG------------HGGSLNLQCNS 180
++ R+ + A D RC + GS++ C+
Sbjct: 92 ---------LRCREGYGGA-----DCERCADGYFGDALIAKNCQACQCHSNGSVSELCHQ 137
Query: 181 E-GRCQCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKD 238
E G+CQC+ V G +CD C N + GE+ C+ CECN GSV CDS +G+C C+
Sbjct: 138 ETGQCQCRQHVIGRQCDECMPNCWWDGESQRCRPCECNVRGSVSQ--RCDS-EGRCVCRA 194
Query: 239 NVEGAQC 245
G +C
Sbjct: 195 GFVGRRC 201
>gi|355698942|gb|AES00966.1| laminin, gamma 2 [Mustela putorius furo]
Length = 126
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 69/101 (68%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD EL +TG+G CL+C DGP CE+C+D +Y++ + C CNC+
Sbjct: 17 CDCNGKSGQCVFDPELRRQTGNGFRCLNCNDHTDGPRCERCQDGFYRQRERDRCLPCNCH 76
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 101
GSL+ +C+S GRC CKPGVTGD+CDRC + +AGC
Sbjct: 77 TKGSLSARCDSSGRCSCKPGVTGDRCDRCLPGFHSLTDAGC 117
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
GSL+ +C+S GRC CKPGVTGD+CDRC + +AGC
Sbjct: 79 GSLSARCDSSGRCSCKPGVTGDRCDRCLPGFHSLTDAGC 117
>gi|395824897|ref|XP_003785687.1| PREDICTED: laminin subunit gamma-2 [Otolemur garnettii]
Length = 1191
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C FD EL+ +TG G CL+CQ + +G +CE+C++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRTCVFDFELHRQTGRGLRCLNCQDNTEGFHCERCKEGFYRHRDRDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GS++ +C++ GRC CKPGVTGD+CDRC +AGC C+C+PAG
Sbjct: 88 SKGSVSARCDNSGRCSCKPGVTGDRCDRCLPGFRMLTDAGCTQDQRPLDSKCDCDPAG 145
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GS++ +C++ GRC CKPGVTGD+CDRC +AGC C+C+PAG
Sbjct: 90 GSVSARCDNSGRCSCKPGVTGDRCDRCLPGFRMLTDAGCTQDQRPLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CDS G+C CK V G +C
Sbjct: 149 --PCDS--GRCVCKPAVTGERC 166
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS ++C S+G C
Sbjct: 536 GRCLKCIHNTAGAYCDQCKAGYF---GDPLAPNPADKCQACNCNPMGSEAVECRSDGSCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGLNCE 603
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGERGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N GA C
Sbjct: 544 NTAGAYC 550
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG++CDRC +Y GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRPGYYHLERGNPEGCTQCFC 189
>gi|291236750|ref|XP_002738301.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1918
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 101/206 (49%), Gaps = 35/206 (16%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
AC+CN S+ C + G +C CK GV G +CDRC +Y+ E GC C C+P GS
Sbjct: 715 ACDCNMNYSMGDTCTAHGGQCVCKTGVYGRQCDRCQPGYYNLTEDGCTPCNCDPLGSASL 774
Query: 115 TPNCDSVKGQCE----SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
CD GQC A L++ + E +Q R C+ D Y
Sbjct: 775 V--CDFESGQCPCQEGVATLATDSTLSLEDTMQCR--------------LCQTDYYGFSS 818
Query: 171 G-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
G GS +LQC+ G CQCK + G KCD+C ++DF GC C+CN AG
Sbjct: 819 GSGCTPCDCSEDGSTSLQCDELGECQCKDTIGGAKCDQCLPGYHDFTADGCSGCDCNVAG 878
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
SV++T CD G C CK NVEG +C
Sbjct: 879 SVEST--CDP-NGICTCKANVEGDKC 901
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 33 RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 92
D C C+ +YY S + CT C+C+ GS +LQC+ G CQCK + G KCD+C
Sbjct: 801 EDTMQCRLCQTDYYGFSSGSGCTPCDCSEDGSTSLQCDELGECQCKDTIGGAKCDQCLPG 860
Query: 93 HYDFGEAGCKSCECNPAGSVKNT--PN 117
++DF GC C+CN AGSV++T PN
Sbjct: 861 YHDFTADGCSGCDCNVAGSVESTCDPN 887
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 90/240 (37%), Gaps = 64/240 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NFCT 55
C+CN + C +D+ T G C C+ + G CE C YY+ + + C
Sbjct: 307 CDCNEHAANCSYDE-----TVGKGVCEGCEDNTAGLFCEICVAGYYRNQSEPVNSPDVCI 361
Query: 56 ACNCNPIGSLNLQCNSE--------------GRCQCKPGVTGDKCDRCDVNHYDFGEAG- 100
C+C P+G+L N G+C C VTG +CD C +Y +
Sbjct: 362 GCDCEPLGTLPTSENVTECSQYENDVTGQPVGQCSCIDFVTGRRCDECIDEYYGLKQVES 421
Query: 101 ---CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
CK C C G+V + C+ +GQC + +T R D
Sbjct: 422 AGLCKECGCKILGTVNASNVCEKTEGQCPC-------KPNTFER---------------D 459
Query: 158 LRRCKRDTYPL-------------GHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
RCK Y +GGS CN G C C+P + G +C+ D ++
Sbjct: 460 CSRCKDGFYAFPSSTEMDCLACRCDYGGSYTQICNIVSGLCDCRPNLIGQRCNMVDSGYF 519
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C Y+ + D C+ C+CN GS+ C+ G C CK V GDKCD+
Sbjct: 845 CKDTIGGAKCDQCLPGYHDFTADG-CSGCDCNVAGSVESTCDPNGICTCKANVEGDKCDQ 903
Query: 89 CDVNHYDFGEA---GCKSCEC 106
C Y+ GC+SC C
Sbjct: 904 CKSQTYNLQALNPDGCQSCFC 924
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 168 LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNT 224
LG + N+ +EG+C CKP C RC Y F E C +C C+ GS T
Sbjct: 433 LGTVNASNVCEKTEGQCPCKPNTFERDCSRCKDGFYAFPSSTEMDCLACRCDYGGSY--T 490
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
C+ V G C+C+ N+ G +C
Sbjct: 491 QICNIVSGLCDCRPNLIGQRC 511
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCECK 237
G+C C VTG +CD C +Y + CK C C G+V + C+ +GQC CK
Sbjct: 393 GQCSCIDFVTGRRCDECIDEYYGLKQVESAGLCKECGCKILGTVNASNVCEKTEGQCPCK 452
Query: 238 DN 239
N
Sbjct: 453 PN 454
>gi|134024218|gb|AAI36180.1| LOC100125073 protein [Xenopus (Silurana) tropicalis]
Length = 1033
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
CNCN +++C FD +Y +G GG C +C+ G NCE+CR +YY+ S +
Sbjct: 312 CNCNNHADKCHFDPAVYEASGRVSGGVCDNCRDGTTGRNCERCRSDYYRNPNKDMSHRDA 371
Query: 54 CTACNCNPIGSLNLQC--NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C +C+C+P GS++ + GRC CK V G++CD+C +Y + GC C CNP
Sbjct: 372 CISCDCDPEGSIDGGSCDDLTGRCNCKENVGGERCDQCKPGYYLLSASNPQGCTKCTCNP 431
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL---RRCKR-D 164
G ++ P CDS GQC+ L + D W+L R C+R
Sbjct: 432 QGMERDQP-CDSETGQCKC------------LPNVLGQRCDQCATNHWNLASGRGCERCG 478
Query: 165 TYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
+P S +LQCN + G+C C+ G G C C Y + GC++C C+ G+++
Sbjct: 479 CHP---RNSYSLQCNQATGQCLCREGFGGRFCTECPDRMYGSLQTGCRACNCDFQGTLEQ 535
Query: 224 TPNCDSVKGQCECKDNVEGAQCRS 247
CD G+C C+ + G +C S
Sbjct: 536 --GCDKANGRCLCRPGITGVRCDS 557
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 90/183 (49%), Gaps = 20/183 (10%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQ-CNSE-GRCQCKPGVTG 83
+C+ + G C++C+ YY S N CT C CNP G Q C+SE G+C+C P V G
Sbjct: 396 NCKENVGGERCDQCKPGYYLLSASNPQGCTKCTCNPQGMERDQPCDSETGQCKCLPNVLG 455
Query: 84 DKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+CD+C NH++ GC+ C C+P S + C+ GQC + GR TE
Sbjct: 456 QRCDQCATNHWNLASGRGCERCGCHPRNSY--SLQCNQATGQCLCRE-GFGGRFCTECPD 512
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVN 201
+ G+ R C D G+L C+ + GRC C+PG+TG +CD C
Sbjct: 513 RM------YGSLQTGCRACNCD-----FQGTLEQGCDKANGRCLCRPGITGVRCDSCQRG 561
Query: 202 HYD 204
+ D
Sbjct: 562 YSD 564
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 69/288 (23%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSGDN 52
C C G ++RC D++ Y C+ CQ + G NCE+C D + ++ + DN
Sbjct: 246 CFCYGHADRCMPSGALDRDHYGEIQVYDKCI-CQHNTVGENCERCADLFHDLPWRPADDN 304
Query: 53 F---CTACNCN---------PIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY----- 94
+ C CNCN P S G C C+ G TG C+RC ++Y
Sbjct: 305 YPNECRRCNCNNHADKCHFDPAVYEASGRVSGGVCDNCRDGTTGRNCERCRSDYYRNPNK 364
Query: 95 DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
D C SC+C+P GS+ +CD + G+C + + G
Sbjct: 365 DMSHRDACISCDCDPEGSIDGG-SCDDLTGRCNCKE-------------------NVGGE 404
Query: 154 RIWDLRRCKRDTYPLG--------------HGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
R +CK Y L G + C+SE G+C+C P V G +CD+C
Sbjct: 405 RC---DQCKPGYYLLSASNPQGCTKCTCNPQGMERDQPCDSETGQCKCLPNVLGQRCDQC 461
Query: 199 DVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
NH++ GC+ C C+P S + C+ GQC C++ G C
Sbjct: 462 ATNHWNLASGRGCERCGCHPRNSY--SLQCNQATGQCLCREGFGGRFC 507
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ G C +C D Y S C ACNC+ G+L C+ + GRC C+PG+T
Sbjct: 494 GQCL-CREGFGGRFCTECPDRMY-GSLQTGCRACNCDFQGTLEQGCDKANGRCLCRPGIT 551
Query: 83 GDKCDRCDVNHYD 95
G +CD C + D
Sbjct: 552 GVRCDSCQRGYSD 564
>gi|301607981|ref|XP_002933550.1| PREDICTED: laminin subunit beta-3 [Xenopus (Silurana) tropicalis]
Length = 1157
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 131/266 (49%), Gaps = 39/266 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
CNCN +++C FD +Y +G GG C +C+ G NCE+CR +YY+ S +
Sbjct: 312 CNCNNHADKCHFDPAVYEASGRVSGGVCDNCRDGTTGRNCERCRSDYYRNPNKDMSHRDA 371
Query: 54 CTACNCNPIGSLNLQC--NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C +C+C+P GS++ + GRC CK V G++CD+C +Y + GC C CNP
Sbjct: 372 CISCDCDPEGSIDGGSCDDLTGRCNCKENVGGERCDQCKPGYYLLSASNPQGCTKCTCNP 431
Query: 109 AGSVKNTPNCDSVKGQCE--SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL---RRCKR 163
G ++ P CDS GQC+ L R D W+L R C+R
Sbjct: 432 QGMERDQP-CDSETGQCKCLPNVLGQR--------------CDQCATNHWNLASGRGCER 476
Query: 164 -DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+P S +LQCN + G+C C+ G G C C Y + GC++C C+ G++
Sbjct: 477 CGCHP---RNSYSLQCNQATGQCLCREGFGGRFCTECPDRMYGSLQTGCRACNCDFQGTL 533
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCRS 247
+ CD G+C C+ + G +C S
Sbjct: 534 EQ--GCDKANGRCLCRPGITGVRCDS 557
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 90/183 (49%), Gaps = 20/183 (10%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQ-CNSE-GRCQCKPGVTG 83
+C+ + G C++C+ YY S N CT C CNP G Q C+SE G+C+C P V G
Sbjct: 396 NCKENVGGERCDQCKPGYYLLSASNPQGCTKCTCNPQGMERDQPCDSETGQCKCLPNVLG 455
Query: 84 DKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+CD+C NH++ GC+ C C+P S + C+ GQC + GR TE
Sbjct: 456 QRCDQCATNHWNLASGRGCERCGCHPRNSY--SLQCNQATGQCLCRE-GFGGRFCTECPD 512
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVN 201
+ G+ R C D G+L C+ + GRC C+PG+TG +CD C
Sbjct: 513 RM------YGSLQTGCRACNCD-----FQGTLEQGCDKANGRCLCRPGITGVRCDSCQRG 561
Query: 202 HYD 204
+ D
Sbjct: 562 YSD 564
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 121/288 (42%), Gaps = 69/288 (23%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSGDN 52
C C G ++RC D++ Y C+ CQ + G NCE+C D + ++ + DN
Sbjct: 246 CFCYGHADRCMPSGALDRDHYGEIQVYDKCI-CQHNTVGENCERCADLFHDLPWRPADDN 304
Query: 53 F---CTACNCN---------PIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY----- 94
+ C CNCN P S G C C+ G TG C+RC ++Y
Sbjct: 305 YPNECRRCNCNNHADKCHFDPAVYEASGRVSGGVCDNCRDGTTGRNCERCRSDYYRNPNK 364
Query: 95 DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
D C SC+C+P GS+ + +CD + G+C + + G
Sbjct: 365 DMSHRDACISCDCDPEGSI-DGGSCDDLTGRCNCKE-------------------NVGGE 404
Query: 154 RIWDLRRCKRDTYPLG--------------HGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
R +CK Y L G + C+SE G+C+C P V G +CD+C
Sbjct: 405 RC---DQCKPGYYLLSASNPQGCTKCTCNPQGMERDQPCDSETGQCKCLPNVLGQRCDQC 461
Query: 199 DVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
NH++ GC+ C C+P S + C+ GQC C++ G C
Sbjct: 462 ATNHWNLASGRGCERCGCHPRNSY--SLQCNQATGQCLCREGFGGRFC 507
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ G C +C D Y S C ACNC+ G+L C+ + GRC C+PG+T
Sbjct: 494 GQCL-CREGFGGRFCTECPDRMY-GSLQTGCRACNCDFQGTLEQGCDKANGRCLCRPGIT 551
Query: 83 GDKCDRCDVNHYD 95
G +CD C + D
Sbjct: 552 GVRCDSCQRGYSD 564
>gi|432865795|ref|XP_004070617.1| PREDICTED: laminin subunit beta-2-like [Oryzias latipes]
Length = 1576
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 137/310 (44%), Gaps = 68/310 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN SN C FD +Y TG+ GG C +CQ + G NCE C+ YY+ +
Sbjct: 331 CNCNDHSNLCHFDMAVYLATGNVSGGVCDECQHNTMGRNCEMCQLFYYKDPLKDIRDPHV 390
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C C+C+P GS N C+S G+C+CK V G +CD+C + G
Sbjct: 391 CKPCDCDPDGSENGGMCDSHTDLALGMMGGQCRCKANVEGPRCDKCKTGFFGLSADSAHG 450
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR-----VHTELRVQSRK---NFDPAG 152
C+ C C+ G+V + CD V G C +L + GR + ++ + R + AG
Sbjct: 451 CQPCRCDRRGTVTGSSQCDPVSGDCFCKRLVT-GRSCDQCLLLQIALMPRHSSLDMFTAG 509
Query: 153 NRIWDLRRCKRDTY--------------------------PLGHGGSLNLQCNSE----- 181
+ +R+ + Y + + G+L C+ +
Sbjct: 510 DPASAVRKQTYERYHCHEGAKSVIRPQMSDTCAKLISSMSAIINDGALACNCDPQGSMSS 569
Query: 182 ------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
G+C+C+P V G +CD+C Y FG +GC C C+ GSV T CD GQC+
Sbjct: 570 VCDVRGGQCRCRPNVIGQRCDKCAPGTYGFGPSGCIPCGCSLEGSV--TRLCDKFSGQCQ 627
Query: 236 CKDNVEGAQC 245
C+ G +C
Sbjct: 628 CRPGAFGQRC 637
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---------SEGR 74
G C C + +GPNC CR Y+ + C C CN +G+ QC + G+
Sbjct: 783 GECRKCLYNTEGPNCNICRSGYHGDAARRNCRKCTCNFLGTERSQCTGREDCVCQRASGQ 842
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCE 126
CQC P V G CD C NH++ GC C C+P SV T +C+ GQC+
Sbjct: 843 CQCLPNVVGLTCDHCAPNHWNLANGMGCAPCNCDPNNSV--TSSCNEFTGQCQ 893
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 113/273 (41%), Gaps = 48/273 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG +++C RTG C++C+ + G C++C D YY + C
Sbjct: 653 CQCNGHADQC------DQRTGA---CINCRDNTGGDKCDRCADGYYGSPVLGGASGAQCR 703
Query: 61 PIG---------SLNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKS 103
P C + R C C G TG +C+ C +Y + + G C+
Sbjct: 704 PCPCPEGPNSGRHFAASCYQDNRNLQIICNCNQGYTGARCEECAPGYYGNPSQPGGRCQP 763
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+CN + + CD G+C ++ G R S + D A R C++
Sbjct: 764 CQCNNNIDMSDMDACDRRTGECRKCLYNTEGPNCNICR--SGYHGDAA------RRNCRK 815
Query: 164 DTYPLGHGGSLNLQCN---------SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSC 213
T G+ QC + G+CQC P V G CD C NH++ GC C
Sbjct: 816 CT--CNFLGTERSQCTGREDCVCQRASGQCQCLPNVVGLTCDHCAPNHWNLANGMGCAPC 873
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C+P SV T +C+ GQC+C+D G CR
Sbjct: 874 NCDPNNSV--TSSCNEFTGQCQCRDGFGGQTCR 904
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 94/248 (37%), Gaps = 79/248 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS-------GDNFCTACNCNPIGSL---NLQCN--- 70
G C+ C + G NCE+C D Y + N C CNCN +L ++
Sbjct: 292 GRCV-CNHNTKGLNCEQCDDFYNDRPWRPAEGRNTNACKKCNCNDHSNLCHFDMAVYLAT 350
Query: 71 ---SEGRC-QCKPGVTGDKCDRCDVNHY-----DFGEAG-CKSCECNPAGSVKNTPNCDS 120
S G C +C+ G C+ C + +Y D + CK C+C+P GS +N CDS
Sbjct: 351 GNVSGGVCDECQHNTMGRNCEMCQLFYYKDPLKDIRDPHVCKPCDCDPDGS-ENGGMCDS 409
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
HT+L LG G
Sbjct: 410 ----------------HTDL--------------------------ALGMMG-------- 419
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G+C+CK V G +CD+C + GC+ C C+ G+V + CD V G C CK
Sbjct: 420 -GQCRCKANVEGPRCDKCKTGFFGLSADSAHGCQPCRCDRRGTVTGSSQCDPVSGDCFCK 478
Query: 238 DNVEGAQC 245
V G C
Sbjct: 479 RLVTGRSC 486
>gi|170582914|ref|XP_001896346.1| laminin alpha chain [Brugia malayi]
gi|158596476|gb|EDP34814.1| laminin alpha chain, putative [Brugia malayi]
Length = 3357
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 112/232 (48%), Gaps = 44/232 (18%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
DC + G C +C+D + +N C AC+CN GS + +C+ G+C CK GV G +C
Sbjct: 949 DCHNNYVGMQCNRCKDGH--GDIENMCPACSCNMTGSFSSECDEVSGQCACKTGVFGKQC 1006
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
D C ++++F E GC+ C CN G++ + CD+V G+CE RK
Sbjct: 1007 DMCRASYFNFSENGCEFCHCNAFGAIDDG-RCDNVTGKCE-----------------CRK 1048
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNSE-GRCQCKPGVTGDK 194
N + +C + + G GS +QC++ G+C CK GVTG K
Sbjct: 1049 NVEGKM-----CEKCANGYFNITSGLGCQACDCDSIGSKGIQCDTHTGQCDCKSGVTGLK 1103
Query: 195 CDRCDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD+C NH+ GCK C PA G + CDS+ G+C C N G C
Sbjct: 1104 CDKCAPNHFGLNANGCKECRICPAPGHI-----CDSITGECICPPNTIGEMC 1150
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 119/229 (51%), Gaps = 29/229 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C+ + +G CEKC + Y+ + C AC+C+ IGS +QC++ G+C CK GVTG KC
Sbjct: 1045 ECRKNVEGKMCEKCANGYFNITSGLGCQACDCDSIGSKGIQCDTHTGQCDCKSGVTGLKC 1104
Query: 87 DRCDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
D+C NH+ GCK C PA G + CDS+ G+C ++ G + E +
Sbjct: 1105 DKCAPNHFGLNANGCKECRICPAPGHI-----CDSITGECICPP-NTIGEM-CENCSSNA 1157
Query: 146 KNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
N+DP L C D +G G CN + G+C C+ G G KCDRC ++
Sbjct: 1158 WNYDP-------LNGCTLCDCSGIGADGP---NCNPQTGQCNCRLGFVGLKCDRCIHGYF 1207
Query: 204 DFGEAGCKSCECNPAGSVKNTPN-----CDSVKGQCECKDNVEGAQCRS 247
+F + C+ C C+ +G+ T CD + GQC CK NV G +C S
Sbjct: 1208 NFPQ--CELCNCDLSGTDPATCKNGACLCDEI-GQCSCKKNVIGLKCDS 1253
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 28/137 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
C C + C +D+E+ R G GG C+ C+ + DG NCE+C Y++ SG
Sbjct: 347 CQCFNHATHCEYDEEV-ERLGLSVTPEGIFEGGGKCIACKHNTDGINCERCMWTYFRPSG 405
Query: 51 -----DNFCTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYD 95
++ C C+C+PIGS + C G C CKPG G +CD C + +
Sbjct: 406 VTHYREDACRPCDCDPIGSEHNNCVRDETSADGDQKPGDCICKPGFGGRRCDVCAPGYRN 465
Query: 96 FGEAGCKSCECNPAGSV 112
C+ C CN AGS+
Sbjct: 466 --HPKCEPCPCNRAGSL 480
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C+ C + G CE C N + N CT C+C+ IG+ CN + G+C C+ G
Sbjct: 1137 GECI-CPPNTIGEMCENCSSNAWNYDPLNGCTLCDCSGIGADGPNCNPQTGQCNCRLGFV 1195
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G KCDRC +++F + C+ C C+ +G+
Sbjct: 1196 GLKCDRCIHGYFNFPQ--CELCNCDLSGT 1222
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP 79
G C C+ G +CE C YY C C C+ GS++ CN E G+C+C+P
Sbjct: 1596 GYMCDACKPGYTGMHCESCLTGYYGNPNVIGGMCNECACHQHGSIHGICNQETGQCECRP 1655
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCE 105
G++G C C H F C SC+
Sbjct: 1656 GLSGRDCSLCKERH-AFMNGICTSCD 1680
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG G +CD C + + C+ C CN AGS+ N C+ + C CK NVE
Sbjct: 443 GDCICKPGFGGRRCDVCAPGYRN--HPKCEPCPCNRAGSL-NFDTCE--EEHCICKANVE 497
Query: 242 GAQC 245
G C
Sbjct: 498 GVYC 501
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 99/280 (35%), Gaps = 68/280 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF--CTA 56
CNC G S C G C++CQ + G C +C +Y G F C
Sbjct: 760 CNCEGHSFEC---------DPFTGDCINCQHNTTGRRCHQCLPGHYGNPSLGGEFGQCHP 810
Query: 57 CNCNPI-GSLNLQCNSEGRC---------------QCKPGVTGDKCDRCDVNHYD---FG 97
C C I S + C+ C+ G G+KC+ C +
Sbjct: 811 CACPTIENSHSALCSLTQLIVGGAAAYGEDAYVCTACEHGYDGNKCEICADGFFGNPLIK 870
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
C+ C CN NCD G+C ++ G H E
Sbjct: 871 NGTCEPCNCNGNIDPMTIGNCDRKTGKCLKCIYNTAGD-HCE------------------ 911
Query: 158 LRRCKRDTY---------PLG--HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF 205
+CK + + P G GS + C+ G C C G +C+RC H D
Sbjct: 912 --KCKENHWGNPKDKSCRPCGCHPKGSHSATCDKLTGICDCHNNYVGMQCNRCKDGHGDI 969
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
E C +C CN GS + CD V GQC CK V G QC
Sbjct: 970 -ENMCPACSCNMTGSF--SSECDEVSGQCACKTGVFGKQC 1006
>gi|2137468|pir||S69000 laminin gamma 2 chain - mouse
Length = 1192
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 103/218 (47%), Gaps = 59/218 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ + G G CL+C + G +CE+ R+ +YQ + C CNC+
Sbjct: 28 CDCNGKSRQCVFDQELHRQAGSGFRCLNCNDNTAGVHCERSREGFYQHQSKSRCLPCNCH 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+ C++ G+C+CKPGVTG +CD+C + +AG C
Sbjct: 88 SKGSLSAGCDNSGQCRCKPGVTGQRCDQCQPGFHMLTDAG-----------------CTR 130
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+GQ +S + + DPAG ++ C+S
Sbjct: 131 DQGQLDS-----------------KCDCDPAG---------------------ISGPCDS 152
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG++CDRC Y A GC C C
Sbjct: 153 -GRCVCKPAVTGERCDRCRPRDYHLDRANPEGCTQCFC 189
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GSL+ C++ G+C+CKPGVTG +CD+C + +AGC C+C+PAG
Sbjct: 90 GSLSAGCDNSGQCRCKPGVTGQRCDQCQPGFHMLTDAGCTRDQGQLDSKCDCDPAGI--- 146
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CDS G+C CK V G +C
Sbjct: 147 SGPCDS--GRCVCKPAVTGERC 166
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNC+P+G+ +C +G C
Sbjct: 537 GRCLKCIYNTAGVYCDQCKAGYF---GDPLAPNPADKCRACNCSPMGAEPGECRGDGSCV 593
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG CD +
Sbjct: 594 CKPGFGAFNCDHAALT 609
>gi|345325479|ref|XP_001516019.2| PREDICTED: laminin subunit gamma-2 [Ornithorhynchus anatinus]
Length = 1207
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 11/141 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG SN+C FD + + + + CL+C+ + G +CEKC++ +Y++ + C CNCN
Sbjct: 53 CDCNGKSNQCIFDPKQFGKPENRLRCLNCKDNTAGVHCEKCKEGFYRQWDQDPCLPCNCN 112
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSV 112
G+LN QC+ G+C CKPGV G+KCDRC + E GCK+ C+C+PAG +
Sbjct: 113 SKGTLNPQCDRYGQCSCKPGVMGEKCDRCQPGFHSLTETGCKANRLQQISGCDCDPAGGM 172
Query: 113 KNTPNCDSVKGQCESAQLSSR 133
CD+ + C+ A + R
Sbjct: 173 G---QCDANRCVCKVAVVGER 190
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
G+LN QC+ G+C CKPGV G+KCDRC + E GCK+ C+C+PAG +
Sbjct: 115 GTLNPQCDRYGQCSCKPGVMGEKCDRCQPGFHSLTETGCKANRLQQISGCDCDPAGGMG- 173
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ +C CK V G +C
Sbjct: 174 --QCDA--NRCVCKVAVVGERC 191
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C + G +C++CRD Y+ + N C CNC+ +GS L C +G C CKP
Sbjct: 561 GECLKCLYNTTGFSCDQCRDGYFGNPLAPNPTNKCQVCNCDSVGSDPLDCQDDGTCICKP 620
Query: 80 GVTGDKC 86
G G C
Sbjct: 621 GFEGPTC 627
>gi|444707767|gb|ELW48958.1| Laminin subunit alpha-3 [Tupaia chinensis]
Length = 3073
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 129/274 (47%), Gaps = 56/274 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D ++ + GG C++CQ + G NCEKC YY+ SG
Sbjct: 300 CNCHGHATDCYYDPDIEQQQASLNSQGVYAGGGVCINCQHNTAGVNCEKCAKGYYRPSGV 359
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+CN G L C++ GRC C+PGV G +CD C + Y F C++C+C
Sbjct: 360 PVDAPHGCIRCDCNLEGVLPEICDAYGRCLCRPGVEGPQCDTCFLGFYSF--PICQACQC 417
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ GS + C++V GQC + R G R RC Y
Sbjct: 418 SALGSYQMP--CNAVTGQC-----------------ECRPGI--TGQRC---DRCLSGAY 453
Query: 167 PLGH--------GGSLNL--QC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 212
H G+++ +C +G C CKP V GD CD C+ ++ ++ GC+
Sbjct: 454 DFPHCQACLCHEAGTVSGIGECGQRDGDCHCKPHVDGDSCDTCEDGYFAVEKSNYFGCQG 513
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C C+ G++ +P C G C+C+++V G C+
Sbjct: 514 CHCDVGGAL--SPVCSGPSGMCQCREHVVGKSCQ 545
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 95/205 (46%), Gaps = 41/205 (20%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P G++ C+ EG +C C+P V G +C RC +Y F CK C C
Sbjct: 1094 NGALPCECHPTGAVGHHCSPEGGQCPCQPNVIGRQCTRCGTGYYGF--PLCKPCNCGRRL 1151
Query: 111 SVKNTPNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG-----NRIWDLRRC 161
+ T C +V+ QCE+ ++ S +F P N C
Sbjct: 1152 CEEITGKCLCPPGTVRPQCEACEMHSF-------------SFHPLAGCEGCN-------C 1191
Query: 162 KRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
R G G+ +C+ + G+C+CKP +TG +CDRC Y F E C C CN G+
Sbjct: 1192 SRS----GIVGATTPECDRDSGQCRCKPRITGRQCDRCASGFYHFPE--CVPCNCNRDGT 1245
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD+V G C CK+NVEG +C
Sbjct: 1246 EPGV--CDAVTGACLCKENVEGTKC 1268
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG---RCQCKP 79
G C +C + G +CE+C++ YY + C C C S C G RC CKP
Sbjct: 1495 GDSCQNCAHNTAGEHCERCKEGYYGNAVHGSCRICPCPHSNSFATGCVVNGGNVRCSCKP 1554
Query: 80 GVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G TG +C+RC ++ FG C+ C CN G + +CD V G C
Sbjct: 1555 GYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNNNGQLG---SCDPVNGDC 1600
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCN---PIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ +G+ +C+ + G+C+CKP +TG +CDRC
Sbjct: 1168 PQCEACEMHSFSFHPLAGCEGCNCSRSGIVGATTPECDRDSGQCRCKPRITGRQCDRCAS 1227
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD+V G C
Sbjct: 1228 GFYHFPE--CVPCNCNRDGTEPGV--CDAVTGAC 1257
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 100/265 (37%), Gaps = 82/265 (30%)
Query: 28 DCQGDRDGPNCEKCRDNYYQK-------SGDNFCTACNCN----------PIGSLNLQCN 70
+CQ G C++C + QK N C ACNC+ I N
Sbjct: 264 ECQHHTCGETCDRCCAGFSQKRWRPATWEQSNECEACNCHGHATDCYYDPDIEQQQASLN 323
Query: 71 SEGR-------CQCKPGVTGDKCDRCDVNHYDF------GEAGCKSCECNPAGSVKNTPN 117
S+G C+ G C++C +Y GC C+CN G +
Sbjct: 324 SQGVYAGGGVCINCQHNTAGVNCEKCAKGYYRPSGVPVDAPHGCIRCDCNLEGVLPEI-- 381
Query: 118 CDS---------VKG-QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
CD+ V+G QC++ L ++P
Sbjct: 382 CDAYGRCLCRPGVEGPQCDTCFLGFY-------------------------------SFP 410
Query: 168 L------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
+ GS + CN+ G+C+C+PG+TG +CDRC YDF C++C C+ AG+
Sbjct: 411 ICQACQCSALGSYQMPCNAVTGQCECRPGITGQRCDRCLSGAYDFPH--CQACLCHEAGT 468
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
V C G C CK +V+G C
Sbjct: 469 VSGIGECGQRDGDCHCKPHVDGDSC 493
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 66/160 (41%), Gaps = 38/160 (23%)
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
F G CEC+P G+V + +C GQC Q + GR T
Sbjct: 1091 FYHNGALPCECHPTGAVGH--HCSPEGGQC-PCQPNVIGRQCT----------------- 1130
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
RC Y G L CN G+C C PG +C+ C+++ + F
Sbjct: 1131 ----RCGTGYY----GFPLCKPCNCGRRLCEEITGKCLCPPGTVRPQCEACEMHSFSFHP 1182
Query: 208 -AGCKSCECNPAGSV-KNTPNCDSVKGQCECKDNVEGAQC 245
AGC+ C C+ +G V TP CD GQC CK + G QC
Sbjct: 1183 LAGCEGCNCSRSGIVGATTPECDRDSGQCRCKPRITGRQC 1222
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 81/204 (39%), Gaps = 38/204 (18%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C CQ + G C +C YY G C CNC L G+C C PG
Sbjct: 1115 GGQC-PCQPNVIGRQCTRCGTGYY---GFPLCKPCNCG----RRLCEEITGKCLCPPGTV 1166
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGSV-KNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+C+ C+++ + F AGC+ C C+ +G V TP CD GQC
Sbjct: 1167 RPQCEACEMHSFSFHPLAGCEGCNCSRSGIVGATTPECDRDSGQCRCKP----------- 1215
Query: 141 RVQSRKNFDPAGNRIWDLRRC-----KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDK 194
R+ R+ D + + C RD G+ C++ G C CK V G K
Sbjct: 1216 RITGRQC-DRCASGFYHFPECVPCNCNRD-------GTEPGVCDAVTGACLCKENVEGTK 1267
Query: 195 CDRCDVNHYDFGEA---GCKSCEC 215
C C + A GC +C C
Sbjct: 1268 CSMCREGSFHLDSANPKGCTTCFC 1291
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ DG +C+ C D Y+ N+ C C+C+ G+L+ C+ G CQC+ V G
Sbjct: 484 CKPHVDGDSCDTCEDGYFAVEKSNYFGCQGCHCDVGGALSPVCSGPSGMCQCREHVVGKS 543
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 544 CQRPENNYY 552
>gi|281371494|ref|NP_001094110.1| laminin, gamma 2 precursor [Rattus norvegicus]
Length = 1192
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 75/118 (63%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + G +CE+CR+ +Y++ + C CNC+
Sbjct: 28 CDCNGKSRQCVFDQELHRQTGNGFRCLNCNDNTAGVHCERCREGFYRQRDRDRCLPCNCH 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAG 110
GSL C++ G+C+CKPGV G +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLGAGCDNSGQCRCKPGVVGQRCDRCQPGFHMLTDAGCTRDQRQLDSKCDCDPAG 145
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GSL C++ G+C+CKPGV G +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLGAGCDNSGQCRCKPGVVGQRCDRCQPGFHMLTDAGCTRDQRQLDSKCDCDPAGI--- 146
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CDS G+C CK V G +C
Sbjct: 147 SGPCDS--GRCVCKPAVTGERC 166
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS +C S+G C
Sbjct: 536 GRCLKCIYNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPVGSEPGECRSDGSCV 592
Query: 77 CKPGVTGDKC 86
CKPG G C
Sbjct: 593 CKPGFGGLNC 602
>gi|405973367|gb|EKC38085.1| Laminin subunit alpha-2 [Crassostrea gigas]
Length = 3502
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 129/263 (49%), Gaps = 49/263 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C +GPNC++C+D YY ++ + CTACNC+ GS+N C+ GRC CK
Sbjct: 779 GECLRCLNHTEGPNCQRCQDGYYGRAVNGDCTACNCDMNGSVNGSCDQYSGRCICKDRFY 838
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-----------CESAQ-- 129
G +CD+C Y E GC C+C+P GS + CDS GQ C+S Q
Sbjct: 839 GRRCDQCQPG-YGSVEEGCTPCDCDPVGSRGSL--CDSYTGQCFCNIGVVGRKCDSCQPG 895
Query: 130 ---LSSRG----RVHTELRVQSRKNFDPAG-----NRIWDLR--RCKRDTYPLGHG---- 171
SSRG +T+ Q+ D G + + R C+ + + LG G
Sbjct: 896 FFGFSSRGCKDCGCNTQGTNQTEPCDDITGICNCLHNVIGSRCNTCQENFWGLGTGNGCT 955
Query: 172 -------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE-CNPAGSVK 222
GS+ QC+ G+C C+PGV G +CD+C +Y F +GCK C+ C+ G V
Sbjct: 956 PCECDRLGSVYSQCDQRTGQCTCRPGVEGQQCDQCRPGYYGFSISGCKRCQPCDKPGHV- 1014
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
CD V G+C C GAQC
Sbjct: 1015 ----CDPVTGRCVCPPLTTGAQC 1033
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 113/236 (47%), Gaps = 45/236 (19%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C + G C C++N++ N CT C C+ +GS+ QC+ G+C C+PGV G +C
Sbjct: 928 NCLHNVIGSRCNTCQENFWGLGTGNGCTPCECDRLGSVYSQCDQRTGQCTCRPGVEGQQC 987
Query: 87 DRCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGR-------VHT 138
D+C +Y F +GCK C+ C+ G V CD V G+C L++ +
Sbjct: 988 DQCRPGYYGFSISGCKRCQPCDKPGHV-----CDPVTGRCVCPPLTTGAQCGQCQPNTWG 1042
Query: 139 ELRVQSRK--NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
RV K N DP R + R+C T G+C CK TGDKCD
Sbjct: 1043 HDRVTGCKLCNCDP---RTAESRQCDLIT----------------GQCTCKADYTGDKCD 1083
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
+C Y+ C+ C C+ G+ ++ N CD+ +GQC+CK+NVE C
Sbjct: 1084 QCSPGFYN--HPNCQLCLCSADGTDPSSCNNSTGVCQCDN-RGQCQCKNNVETRTC 1136
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
C +C G CE C D YY + C C+CNP GS++ CN +G+C+C PG+TG
Sbjct: 1474 CTNCTEGYTGTRCESCADGYYGNPRQAGGHCLPCDCNPEGSVSSSCNFQGQCRCLPGITG 1533
Query: 84 DKCDRCDVNH 93
DKCD C H
Sbjct: 1534 DKCDGCQPRH 1543
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 109/277 (39%), Gaps = 63/277 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
CNCN + RC + G C++CQ G NC+ C YY ++ ++ C C
Sbjct: 648 CNCNNHAERCDINT---------GRCINCQHFTTGENCDTCLPGYYGDPRRGEEDDCKPC 698
Query: 58 NC---NPIGSLNLQCNSEGRC---------QCKPGVTGDKCDRCDVNHY-DFGEAG--CK 102
C P + C + +C G G++C+RC +Y D + G C+
Sbjct: 699 ACPLLEPTNQFSASCQLIPQVGNYDNYKCDKCAVGYIGNRCERCAPGYYGDPTKVGGSCR 758
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
C C + CD G+C R HTE P + +RC+
Sbjct: 759 PCSCGGNIDGGDPGGCDRETGEC------LRCLNHTE---------GP------NCQRCQ 797
Query: 163 RDTYPLG-----------HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
Y GS+N C+ GRC CK G +CD+C Y E GC
Sbjct: 798 DGYYGRAVNGDCTACNCDMNGSVNGSCDQYSGRCICKDRFYGRRCDQCQPG-YGSVEEGC 856
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C+C+P GS + CDS GQC C V G +C S
Sbjct: 857 TPCDCDPVGSRGSL--CDSYTGQCFCNIGVVGRKCDS 891
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 5 GFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS 64
G + +C D L + G C +C+ GP C++C YY G +C C CN G+
Sbjct: 301 GSTGKCVPDDSLMSEGKRPGDC-ECKEGYGGPTCQECAFGYY---GYPYCKPCPCNSAGT 356
Query: 65 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSV 121
L+ Q G C CK V G KCDRC ++ + GC C C SV + N +
Sbjct: 357 LSSQ-QCSGNCVCKENVEGVKCDRCKRGFFNLNKDNPVGCMPCFCFGVSSVCQSSNLGLI 415
Query: 122 KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
K S +S G T + + F W + R
Sbjct: 416 KVVDMSDGMS--GWAVTSVNINGFTYFIQKNEEGWLVYRA 453
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 173 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
SL + G C+CK G G C C +Y G CK C CN AG++ + G
Sbjct: 311 SLMSEGKRPGDCECKEGYGGPTCQECAFGYY--GYPYCKPCPCNSAGTLSS----QQCSG 364
Query: 233 QCECKDNVEGAQC 245
C CK+NVEG +C
Sbjct: 365 NCVCKENVEGVKC 377
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 17/93 (18%)
Query: 35 GPNCEKCRDNYYQKSGDN---------------FCTACNCNPIGSLNLQCNSEGRCQCKP 79
G NCE+C D YY+ G+ + C P SL + G C+CK
Sbjct: 267 GINCERCLDGYYRPLGETPHSRYPCRPCRCEVTLGSTGKCVPDDSLMSEGKRPGDCECKE 326
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
G G C C +Y G CK C CN AG++
Sbjct: 327 GYGGPTCQECAFGYY--GYPYCKPCPCNSAGTL 357
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
GS++ CN +G+C+C PG+TGDKCD C H
Sbjct: 1513 GSVSSSCNFQGQCRCLPGITGDKCDGCQPRH 1543
>gi|313224457|emb|CBY20247.1| unnamed protein product [Oikopleura dioica]
Length = 1656
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 75/125 (60%), Gaps = 6/125 (4%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG ++ C +D EL GHG C+DCQ + DG CE C+ ++ K+ + C C CN
Sbjct: 339 CDCNGLADSCVYDDEL----GHG-RCVDCQDNSDGAKCELCKKGFF-KNENGRCVPCGCN 392
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS + QC+ G+C C GV GDKCDRC N Y+ GC C C+ GS+ N P+C++
Sbjct: 393 ADGSQSEQCDDTGKCYCHYGVDGDKCDRCKDNFYNLARGGCTPCNCHIEGSLNNRPSCNA 452
Query: 121 VKGQC 125
V G C
Sbjct: 453 VTGDC 457
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 108/237 (45%), Gaps = 54/237 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--------QKSGDN 52
C CNG N+ E N G CL C + +G +CE+C D +Y +++
Sbjct: 826 CQCNGNINQL----EAGNCDSFTGKCLKCIYNTEGDHCEQCIDGFYGNPSALVTEQTHVK 881
Query: 53 FCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAG 110
CTAC C+ GS CN + G+CQC PGV GDKCD+C +Y+ GC+ C CNP G
Sbjct: 882 GCTACECDSNGSKTSVCNKATGKCQCLPGVGGDKCDQCLPQYYNLVPGVGCQLCSCNPIG 941
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
SV + CD + GQCE + R C D + GH
Sbjct: 942 SV--SGECDVISGQCECKPGVTGTRCD----------------------ECLPDHW--GH 975
Query: 171 G------------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH-YDFGEAGCKSC 213
GSL+ QCN G C+C+ GV G +CD+C+ N+ YD + C C
Sbjct: 976 SPEGCVPCNCNEHGSLSSQCNIHTGHCECRDGVMGMRCDQCEENYFYDSTDYECSKC 1032
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS + QC+ G+C C GV GDKCDRC N Y+ GC C C+ GS+ N P+C++V
Sbjct: 395 GSQSEQCDDTGKCYCHYGVDGDKCDRCKDNFYNLARGGCTPCNCHIEGSLNNRPSCNAVT 454
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NV G QC+
Sbjct: 455 GDCLCKENVHGRQCK 469
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 107/243 (44%), Gaps = 60/243 (24%)
Query: 35 GPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNL----QCNS-EGRC-QCKPGVTG 83
GP CE+C++N++ C C CN G++N C+S G+C +C G
Sbjct: 799 GPRCERCQENFFGDPLGLYGSHRVCQDCQCN--GNINQLEAGNCDSFTGKCLKCIYNTEG 856
Query: 84 DKCDRCDVNHYDFGEA---------GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
D C++C Y A GC +CEC+ GS T C+ G+C+ L G
Sbjct: 857 DHCEQCIDGFYGNPSALVTEQTHVKGCTACECDSNGS--KTSVCNKATGKCQC--LPGVG 912
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS-EG 182
G++ +C Y L G GS++ +C+ G
Sbjct: 913 -----------------GDKC---DQCLPQYYNLVPGVGCQLCSCNPIGSVSGECDVISG 952
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+C+CKPGVTG +CD C +H+ GC C CN GS+ + C+ G CEC+D V G
Sbjct: 953 QCECKPGVTGTRCDECLPDHWGHSPEGCVPCNCNEHGSL--SSQCNIHTGHCECRDGVMG 1010
Query: 243 AQC 245
+C
Sbjct: 1011 MRC 1013
>gi|313216176|emb|CBY37533.1| unnamed protein product [Oikopleura dioica]
Length = 1656
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 75/125 (60%), Gaps = 6/125 (4%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG ++ C +D EL GHG C+DCQ + DG CE C+ ++ K+ + C C CN
Sbjct: 339 CDCNGLADSCVYDDEL----GHG-RCVDCQDNSDGAKCELCKKGFF-KNENGRCVPCGCN 392
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS + QC+ G+C C GV GDKCDRC N Y+ GC C C+ GS+ N P+C++
Sbjct: 393 ADGSQSEQCDDTGKCYCHYGVDGDKCDRCKDNFYNLARGGCTPCNCHIEGSLNNRPSCNA 452
Query: 121 VKGQC 125
V G C
Sbjct: 453 VTGDC 457
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 108/237 (45%), Gaps = 54/237 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--------QKSGDN 52
C CNG N+ E N G CL C + +G +CE+C D +Y +++
Sbjct: 826 CLCNGNINQL----EAGNCDSFTGKCLKCIYNTEGDHCEQCIDGFYGNPSALVTEQTHVK 881
Query: 53 FCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAG 110
CTAC C+ GS CN + G+CQC PGV GDKCD+C +Y+ GC+ C CNP G
Sbjct: 882 GCTACECDSNGSKTSVCNKATGKCQCLPGVGGDKCDQCLPQYYNLVPGVGCQLCSCNPIG 941
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
SV + CD + GQCE + R C D + GH
Sbjct: 942 SV--SGECDVISGQCECKPGVTGTRCD----------------------ECLPDHW--GH 975
Query: 171 G------------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH-YDFGEAGCKSC 213
GSL+ QCN G C+C+ GV G +CD+C+ N+ YD + C C
Sbjct: 976 SPEGCVPCNCNEHGSLSSQCNIHTGHCECRDGVMGMRCDQCEENYFYDSTDYECSKC 1032
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS + QC+ G+C C GV GDKCDRC N Y+ GC C C+ GS+ N P+C++V
Sbjct: 395 GSQSEQCDDTGKCYCHYGVDGDKCDRCKDNFYNLARGGCTPCNCHIEGSLNNRPSCNAVT 454
Query: 232 GQCECKDNVEGAQCR 246
G C CK+NV G QC+
Sbjct: 455 GDCLCKENVHGRQCK 469
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 107/232 (46%), Gaps = 38/232 (16%)
Query: 35 GPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNL----QCNS-EGRC-QCKPGVTG 83
GP CE+C++N++ C C CN G++N C+S G+C +C G
Sbjct: 799 GPRCERCQENFFGDPLGLYGSHRVCQDCLCN--GNINQLEAGNCDSFTGKCLKCIYNTEG 856
Query: 84 DKCDRCDVNHYDFGEA---------GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
D C++C Y A GC +CEC+ GS T C+ G+C+ L G
Sbjct: 857 DHCEQCIDGFYGNPSALVTEQTHVKGCTACECDSNGS--KTSVCNKATGKCQC--LPGVG 912
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGD 193
+ + N P L C P+G S++ +C+ G+C+CKPGVTG
Sbjct: 913 GDKCDQCLPQYYNLVPGVG--CQLCSCN----PIG---SVSGECDVISGQCECKPGVTGT 963
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CD C +H+ GC C CN GS+ + C+ G CEC+D V G +C
Sbjct: 964 RCDECLPDHWGHSPEGCVPCNCNEHGSL--SSQCNIHTGHCECRDGVMGMRC 1013
>gi|326433679|gb|EGD79249.1| hypothetical protein PTSG_12970 [Salpingoeca sp. ATCC 50818]
Length = 10593
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/137 (36%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH-----GGHCLDCQGDRDGPNCEKCRDNYYQKS-----G 50
C CNG +N C F+ L ++G GG C+DC + GP C +C D YY S
Sbjct: 601 CECNGHANACMFNATLAGQSGTSNLSGGGQCVDCGANTTGPKCGQCADAYYLPSNVAINS 660
Query: 51 DNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCD---VNHYDFGEAGCKSCEC 106
+ C C C+ GS C G+C CK V G KCD C VN GC+ C C
Sbjct: 661 TDPCEPCACDARGSRAFTCQQGSGQCACKQNVVGIKCDTCAPGFVNLQASNPDGCELCTC 720
Query: 107 NPAGSVKNTPNCDSVKG 123
NP G+V C + G
Sbjct: 721 NPTGTVDGASVCSAEDG 737
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 65/226 (28%), Positives = 82/226 (36%), Gaps = 32/226 (14%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQCNSEG--RCQCKPGVTGDKCDRCDV---------NH 93
YY +C CN + C E CQC+ G TG C CD +
Sbjct: 534 YYALRDVAVAGSCVCNGHAEV---CGPETGFACQCEHGTTGTACTECDTLLNDAQWQPSI 590
Query: 94 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR-VHTELRVQSRK------ 146
D C+ CECN G ++ GQ ++ LS G+ V K
Sbjct: 591 VDQPSFECQPCECN--GHANACMFNATLAGQSGTSNLSGGGQCVDCGANTTGPKCGQCAD 648
Query: 147 -NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCD---VN 201
+ P+ I C + GS C G+C CK V G KCD C VN
Sbjct: 649 AYYLPSNVAINSTDPC--EPCACDARGSRAFTCQQGSGQCACKQNVVGIKCDTCAPGFVN 706
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ--CECKDNVEGAQC 245
GC+ C CNP G+V C + G C CK NV G C
Sbjct: 707 LQASNPDGCELCTCNPTGTVDGASVCSAEDGADPCTCKPNVRGFSC 752
>gi|308447764|ref|XP_003087514.1| hypothetical protein CRE_07192 [Caenorhabditis remanei]
gi|308255028|gb|EFO98980.1| hypothetical protein CRE_07192 [Caenorhabditis remanei]
Length = 456
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 127/292 (43%), Gaps = 55/292 (18%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC G SN C++D+++ + G+ GG C++C+ + +G NC KC YY+ G
Sbjct: 21 CNCFGRSNECYYDEQVDLNKQSVDSKGNYEGGGVCVNCRDNTEGINCNKCSYGYYRPEGV 80
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C AC+C+P G+C+C+ G+ CD+C +YD E CK CEC
Sbjct: 81 TWDEPQPCKACDCDPDKHTGSCAEETGKCECQARFVGENCDQCAPGYYDPPE--CKPCEC 138
Query: 107 NPAGSVKNT----------------PNCDS-------VKGQCESAQLSSRGRVHTELRVQ 143
G+V + CD+ V C S G H+
Sbjct: 139 FVNGTVGDVCLPENGQCPCKPGFGGTFCDTCADGFTNVTAGCVECVCDSTGSEHSNCSAA 198
Query: 144 SRKNFDPAGNRIWDLRRCKRDTY----------PLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ + +C+ Y P+G G + Q + G+C CK G GD
Sbjct: 199 TGQCECKPAYAGLSCDKCQVGYYGDDCKFCNCDPMGTEGGVCDQ--TTGQCLCKEGFAGD 256
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KCDRCD+ +Y G CK C C+ AG+ +P CDS GQC C N G C
Sbjct: 257 KCDRCDIAYY--GYPNCKQCSCDGAGTT--SPECDSTSGQCPCSGNFTGRTC 304
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 127/276 (46%), Gaps = 59/276 (21%)
Query: 15 ELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEG 73
E N + G C +C+ G +C+KC+ YY GD+ C CNC+P+G+ C+ + G
Sbjct: 191 EHSNCSAATGQC-ECKPAYAGLSCDKCQVGYY---GDD-CKFCNCDPMGTEGGVCDQTTG 245
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-------- 125
+C CK G GDKCDRCD+ +Y G CK C C+ AG+ +P CDS GQC
Sbjct: 246 QCLCKEGFAGDKCDRCDIAYY--GYPNCKQCSCDGAGTT--SPECDSTSGQCPCSGNFTG 301
Query: 126 -------------------ESAQLSSRGRV-HTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
E ++G+ + + + NF+ G R RCK +
Sbjct: 302 RTCDKCAAGFYNYPECRGCECLVSGAKGQTCDSNGQCYCKGNFE--GERC---DRCKPNF 356
Query: 166 Y--PL-------GHGGSLNLQ----CNSEGRCQCKPGVTGDKCDRCDVNHYDFG---EAG 209
Y P+ G + + Q + C C+ VTG CD+C +D E G
Sbjct: 357 YNSPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGGICDQCKPPFWDLQYHHEDG 416
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+SCECN G++ CD GQC CK N +G +C
Sbjct: 417 CRSCECNTNGTISGLNTCDLKTGQCMCKKNADGRRC 452
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C G+ G C+KC +Y C C C G+ C+S G+C CK G++CDR
Sbjct: 295 CSGNFTGRTCDKCAAGFYNYPE---CRGCECLVSGAKGQTCDSNGQCYCKGNFEGERCDR 351
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C N Y+ C+ C CNP+G ++ CD V S R V + Q + F
Sbjct: 352 CKPNFYN--SPICEECNCNPSGVTRDFQGCDKVS---PGELCSCRKHVTGGICDQCKPPF 406
Query: 149 DPAGNRIWDL--------RRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
WDL R C+ +T G LN G+C CK G +CD+C
Sbjct: 407 -------WDLQYHHEDGCRSCECNTN--GTISGLNTCDLKTGQCMCKKNADGRRCDQC 455
>gi|345325844|ref|XP_001509124.2| PREDICTED: laminin subunit alpha-2 [Ornithorhynchus anatinus]
Length = 2898
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 107/236 (45%), Gaps = 48/236 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ + G C++C+ + C C+CN GS + C G+C C+PGVTG KCDR
Sbjct: 704 CRANVQGRQCDECQPKTFGLQSSRGCVPCHCNSFGSKSFDCEESGQCWCQPGVTGKKCDR 763
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C +Y F E GC C+C+ G+ NCD + G+C
Sbjct: 764 CAHGYYRFEEGGCTPCQCSHLGN-----NCDPITGRC----------------------I 796
Query: 149 DPAGNRIWDLRRCKRDTY--PLGHG---------GSLNLQCN-SEGRCQCKPGVTGDKCD 196
P R C +++ + HG GSL QCN + G C C+P +G KC
Sbjct: 797 CPPNTRGEKCDMCTSNSWGHSIVHGCKACNCSAVGSLAFQCNLNTGHCPCRPEFSGPKCT 856
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
C + H+++ + C CEC+ AG+ T + + K GQC CK NVEG C
Sbjct: 857 ECSLGHWNYPQ--CDLCECSLAGTELLTCHAEIQKCSCADRTGQCSCKVNVEGLHC 910
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 118/261 (45%), Gaps = 54/261 (20%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ G G C +C G CE+C + Y+ + C C CN
Sbjct: 581 NNFSPTCHLDR------GLGLVCDECPFGYAGSRCERCAEGYFGQPSVPGGSCQPCQCND 634
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL ++ G C CKPG TG C+RC + FG+A C+ C CN
Sbjct: 635 ----NLDFSNPGSCDSLSGACLICKPGTTGRYCERCADGY--FGDAVHAKNCQPCHCNIN 688
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTE-----LRVQSRKNFDPAGNRIWDLRRCKRD 164
GS+ C++ GQC+ + + +GR E +QS + P C +
Sbjct: 689 GSLSEV--CNTETGQCK-CRANVQGRQCDECQPKTFGLQSSRGCVP----------CHCN 735
Query: 165 TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
++ GS + C G+C C+PGVTG KCDRC +Y F E GC C+C+ G+
Sbjct: 736 SF-----GSKSFDCEESGQCWCQPGVTGKKCDRCAHGYYRFEEGGCTPCQCSHLGN---- 786
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
NCD + G+C C N G +C
Sbjct: 787 -NCDPITGRCICPPNTRGEKC 806
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D+ + +R GG C++C + G NCE C D +++ G
Sbjct: 214 CNCHGKAEECYYDENVASRNLSLNINGKYIGGGVCINCTKNTTGINCESCIDGFFRPKGV 273
Query: 52 N-----FCTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
+ C CNC+PIGSLN C + G C CK G G CDRC + +
Sbjct: 274 SPNDRQPCHPCNCDPIGSLNDICVKDEKYARRGLPPGFCHCKSGFGGRSCDRCALGYT-- 331
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G C C C GS P
Sbjct: 332 GYPDCVRCNCTVMGSTNEDP 351
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C+ C N + S + C ACNC+ +GSL QCN + G C C+P +
Sbjct: 793 GRCI-CPPNTRGEKCDMCTSNSWGHSIVHGCKACNCSAVGSLAFQCNLNTGHCPCRPEFS 851
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G KC C + H+++ + C CEC+ AG+
Sbjct: 852 GPKCTECSLGHWNYPQ--CDLCECSLAGT 878
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 102/257 (39%), Gaps = 66/257 (25%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
G CLDC+ GP C +C +Y K + C C C LN+ N+
Sbjct: 536 GECLDCKDHTGGPFCNRCLPGFYGDPTKGTTDDCQLCAC----PLNIPSNNFSPTCHLDR 591
Query: 76 -------QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 123
+C G G +C+RC + FG+ C+ C+CN N +CDS+ G
Sbjct: 592 GLGLVCDECPFGYAGSRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSNPGSCDSLSG 649
Query: 124 QCESAQLSSRGR-------------VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
C + + GR VH KN P I
Sbjct: 650 ACLICKPGTTGRYCERCADGYFGDAVHA-------KNCQPCHCNI--------------- 687
Query: 171 GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCD 228
GSL+ CN+E G+C+C+ V G +CD C + + GC C CN GS + +C+
Sbjct: 688 NGSLSEVCNTETGQCKCRANVQGRQCDECQPKTFGLQSSRGCVPCHCNSFGS--KSFDCE 745
Query: 229 SVKGQCECKDNVEGAQC 245
GQC C+ V G +C
Sbjct: 746 E-SGQCWCQPGVTGKKC 761
>gi|308500135|ref|XP_003112253.1| CRE-LAM-3 protein [Caenorhabditis remanei]
gi|308268734|gb|EFP12687.1| CRE-LAM-3 protein [Caenorhabditis remanei]
Length = 3122
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 113/232 (48%), Gaps = 44/232 (18%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
+C+ + G C++C++N+ DN C AC+CN GS+ C+ G+C CK GV G +C
Sbjct: 962 ECKENYIGTQCDRCKENH--GDVDNGCPACDCNETGSIGTDCDQVSGQCNCKQGVFGKQC 1019
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
D+C ++++F +AGC+ C CN GS+++ CD V G+CE R+
Sbjct: 1020 DQCRPSYFNFTDAGCQFCHCNIYGSIEDG-KCDQVSGKCE-----------------CRE 1061
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCN-SEGRCQCKPGVTGDK 194
N + +C + + G GS ++ CN G+C CKPGVTG K
Sbjct: 1062 NVEGTM-----CEKCADGYFNITSGDGCEDCNCDPTGSEDVSCNLVTGQCVCKPGVTGTK 1116
Query: 195 CDRCDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD+C N Y GC CE PA G V CD + G C C N G C
Sbjct: 1117 CDKCLPNFYGLTNEGCSECEPCPAPGQV-----CDPLDGSCVCPPNTVGEMC 1163
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 117/225 (52%), Gaps = 19/225 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G CL C G G +CE C++N++ + + C C C+ G++N QCN E G C+CK
Sbjct: 909 GKCLKCIGHTTGDSCEVCKENHWGNAQLHTCKPCGCHTQGAVNPQCNEENGECECKENYI 968
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC NH D + GC +C+CN GS+ +CD V GQC Q G+ + R
Sbjct: 969 GTQCDRCKENHGDV-DNGCPACDCNETGSIGT--DCDQVSGQCNCKQ-GVFGKQCDQCR- 1023
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
S NF AG + C + Y G + +C+ G+C+C+ V G C++C
Sbjct: 1024 PSYFNFTDAGCQF-----CHCNIY----GSIEDGKCDQVSGKCECRENVEGTMCEKCADG 1074
Query: 202 HYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+++ GC+ C C+P GS +C+ V GQC CK V G +C
Sbjct: 1075 YFNITSGDGCEDCNCDPTGS--EDVSCNLVTGQCVCKPGVTGTKC 1117
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 118/237 (49%), Gaps = 44/237 (18%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN----PIGSLNLQCNSE-GRC-QCKP 79
C C+ +G CE C D ++ + C C CN P+G N C++E G+C +C
Sbjct: 859 CTACERGYEGNKCEHCSDGFFGDPMNGTCEECTCNGNIDPMGIGN--CDTETGKCLKCIG 916
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TGD C+ C NH+ + CK C C+ G+V P C+ G+CE
Sbjct: 917 HTTGDSCEVCKENHWGNAQLHTCKPCGCHTQGAVN--PQCNEENGECEC----------- 963
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNLQCNS-EGRCQCKP 188
++N+ G + RCK + + +G GS+ C+ G+C CK
Sbjct: 964 ------KENY--IGTQ---CDRCKENHGDVDNGCPACDCNETGSIGTDCDQVSGQCNCKQ 1012
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GV G +CD+C ++++F +AGC+ C CN GS+++ CD V G+CEC++NVEG C
Sbjct: 1013 GVFGKQCDQCRPSYFNFTDAGCQFCHCNIYGSIEDG-KCDQVSGKCECRENVEGTMC 1068
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 111/231 (48%), Gaps = 37/231 (16%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKC 86
+C+ + +G CEKC D Y+ + + C CNC+P GS ++ CN G+C CKPGVTG KC
Sbjct: 1058 ECRENVEGTMCEKCADGYFNITSGDGCEDCNCDPTGSEDVSCNLVTGQCVCKPGVTGTKC 1117
Query: 87 DRCDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
D+C N Y GC CE PA G V CD + G C ++ G + +
Sbjct: 1118 DKCLPNFYGLTNEGCSECEPCPAPGQV-----CDPLDGSCVCPP-NTVGEMCENCTTNA- 1170
Query: 146 KNFDPAGNRIWD---LRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
WD L+ CK D +G G + CN+ G+C+CK G KCD C
Sbjct: 1171 ----------WDYHPLKGCKLCDCSDIGSDGGM---CNTLTGQCKCKQAYVGLKCDLCTH 1217
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVK------GQCECKDNVEGAQC 245
++F C+ C CN AG+ + C + G+C CK NV G +C
Sbjct: 1218 GFFNF--PTCEPCGCNAAGT--DPLQCKDGQCLCNELGECPCKKNVRGQKC 1264
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 77/151 (50%), Gaps = 27/151 (17%)
Query: 1 CNCNGFSNRCFFDKEL----YNRTGHG-----GHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
C C ++ C +D+EL ++ T G G CL+C + +G NCE+C+D YY+ SG
Sbjct: 354 CQCFNHAHTCVYDEELDRNKWSITPEGVYEGGGRCLECTHNTEGFNCERCKDGYYRPSGM 413
Query: 51 ----DNFCTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDF 96
++ C C C+P+GS++ C G C CKPG G +C+RC + +
Sbjct: 414 SHYREDACRTCECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGYRN- 472
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C+ C CN AGSV N CD QC++
Sbjct: 473 -HPTCEPCPCNRAGSV-NFDTCDGASCQCKA 501
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 113/269 (42%), Gaps = 48/269 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF--CTA 56
CNC G S+ C G C++CQ + G CE+C+ +Y G C
Sbjct: 775 CNCEGHSDEC---------DPFTGECINCQHNTTGSRCERCQPGFYGNPSLGGELGACWP 825
Query: 57 CNCNPIGS------LNLQCNSEGRC----------QCKPGVTGDKCDRCDVNHY-DFGEA 99
C C + + + + G C+ G G+KC+ C + D
Sbjct: 826 CECPSLDNNRSPECMMTELIVSGAAAANEDDYVCTACERGYEGNKCEHCSDGFFGDPMNG 885
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
C+ C CN NCD+ G+C L G + ++N GN L
Sbjct: 886 TCEECTCNGNIDPMGIGNCDTETGKC----LKCIGHTTGDSCEVCKENH--WGNA--QLH 937
Query: 160 RCKRDTYPLG--HGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
CK P G G++N QCN E G C+CK G +CDRC NH D + GC +C+CN
Sbjct: 938 TCK----PCGCHTQGAVNPQCNEENGECECKENYIGTQCDRCKENHGDV-DNGCPACDCN 992
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS+ +CD V GQC CK V G QC
Sbjct: 993 ETGSIGT--DCDQVSGQCNCKQGVFGKQC 1019
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQ 76
G G C C+ G CE C YY Q G CT C+C+P GSL+ CN G+C+
Sbjct: 1625 GRGYVCNACKPGYTGQYCETCVAGYYGDPQHIGGT-CTPCDCHPDGSLHGACNPLTGQCE 1683
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
CKPGVTG C C H F C SC+
Sbjct: 1684 CKPGVTGRTCSMCQERH-AFINRVCTSCD 1711
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
CKPG TG C+ C +Y D G C C+C+P GS+ C+ + GQCECK V G
Sbjct: 1633 CKPGYTGQYCETCVAGYYGDPQHIGGTCTPCDCHPDGSLHGA--CNPLTGQCECKPGVTG 1690
Query: 243 AQC 245
C
Sbjct: 1691 RTC 1693
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPI-GSLNLQCNS--EGRC---- 75
C DC+ + G CE C Y ++ G N CT C C + S + C + GR
Sbjct: 1572 CTDCEHNTFGDFCEHCLPGYIGDAREGGANACTKCACPLVENSFSDSCVAVDHGRGYVCN 1631
Query: 76 QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCE 126
CKPG TG C+ C +Y D G C C+C+P GS+ C+ + GQCE
Sbjct: 1632 ACKPGYTGQYCETCVAGYYGDPQHIGGTCTPCDCHPDGSLHGA--CNPLTGQCE 1683
>gi|149040990|gb|EDL94947.1| rCG20263, isoform CRA_a [Rattus norvegicus]
Length = 1119
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 129/266 (48%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-- 52
C C+G ++ C +D + YNR G GG C DCQ G NCE C+D +Y+ G +
Sbjct: 571 CQCHGHASSCHYDASMDPFPLEYNRGG-GGVCDDCQHHTTGRNCESCQDYFYRPIGADPA 629
Query: 53 ---FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
C C+CN G+ N L C+ G +C CK V+G +C RC + Y GC+
Sbjct: 630 DPEVCKHCDCNRDGTRNGSLLCDLVGGQCDCKRRVSGRRCFRCHIGFYGLQALDPDGCRP 689
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+CNP+G+V C GQC S + V LR R +F G + LR
Sbjct: 690 CDCNPSGTVDGDITCHHNSGQC-----SCKANV-IGLRCD-RCSF---GFKF--LRSLNA 737
Query: 164 DTYPLGH---GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
D H GS+N C+ G+C CK G +CD C N Y + C+ C+CN AG
Sbjct: 738 DGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLPWSACEVCDCNRAG 797
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ T CD+ GQC CK +V G +C
Sbjct: 798 TQAGT-VCDAETGQCVCKPSVGGRRC 822
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 26/234 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ G C +C++ Y+ +++ + C CNC G++N L C+ S G+C CK
Sbjct: 809 GQCV-CKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCK 867
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C +C+ + ++ GC++CEC+ G++ + CD V GQC L R
Sbjct: 868 LGVTGLRCHQCEPHRFNLTVDNLQGCQACECDSLGTLPGS-TCDPVSGQCLC--LPHRQG 924
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK-PGVTGD 193
E + + F + C T G+++ CNS G+C C+ P TG
Sbjct: 925 RRCE---RCQPGFYSSPGNATGCLPCSCHT-----AGAVSHICNSVTGQCSCRDPSTTGQ 976
Query: 194 KCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +C +++ F C+ C C+ G++ T CD V GQC CK+ V G++C
Sbjct: 977 SCHQCQDHYFGFDPRTGRCQPCHCHLEGALNET--CDVVTGQCFCKEFVTGSKC 1028
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 107/237 (45%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQC 77
GG C DC+ G C +C +Y Q + C C+CNP G+++ + C+ + G+C C
Sbjct: 655 GGQC-DCKRRVSGRRCFRCHIGFYGLQALDPDGCRPCDCNPSGTVDGDITCHHNSGQCSC 713
Query: 78 KPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
K V G +CDRC + F + GC+ C CN GSV CD + GQC + +
Sbjct: 714 KANVIGLRCDRCSFG-FKFLRSLNADGCEPCHCNLHGSVNQL--CDPLSGQCVCKKEAKG 770
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTG 192
R R+NF ++ C R G C++E G+C CKP V G
Sbjct: 771 LRCDV-----CRENFYGLPWSACEVCDCNRA------GTQAGTVCDAETGQCVCKPSVGG 819
Query: 193 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+C C +++ + C C C G+V + CD GQC CK V G +C
Sbjct: 820 RRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCKLGVTGLRCH 876
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 20/226 (8%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + + C C+CN GS+N C+ G+C CK G +
Sbjct: 713 CKANVIGLRCDRCSFGFKFLRSLNADGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLR 772
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y + C+ C+CN AG+ T CD+ GQC + S GR +E + +
Sbjct: 773 CDVCRENFYGLPWSACEVCDCNRAGTQAGT-VCDAETGQC-VCKPSVGGRRCSECK-EGY 829
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKCDRCDVNH 202
N + + C++ G++N L C+ S G+C CK GVTG +C +C+ +
Sbjct: 830 FNLRQNDSHLCLPCNCEKT-------GTVNGSLLCDKSTGQCPCKLGVTGLRCHQCEPHR 882
Query: 203 YDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ GC++CEC+ G++ + CD V GQC C + +G +C
Sbjct: 883 FNLTVDNLQGCQACECDSLGTLPGS-TCDPVSGQCLCLPHRQGRRC 927
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + + + DN C AC C+ +G+L C+ G+C C P G
Sbjct: 866 CKLGVTGLRCHQCEPHRFNLTVDNLQGCQACECDSLGTLPGSTCDPVSGQCLCLPHRQGR 925
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C+RC Y GC C C+ AG+V + C+SV GQC S+ G+ + +
Sbjct: 926 RCERCQPGFYSSPGNATGCLPCSCHTAGAVSHI--CNSVTGQCSCRDPSTTGQSCHQCQ- 982
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC--- 198
FDP R C + G+LN C+ G+C CK VTG KCD C
Sbjct: 983 DHYFGFDPRTGRCQPCH-CHLE-------GALNETCDVVTGQCFCKEFVTGSKCDICVPG 1034
Query: 199 ----DVNHYDFGEAGCKSCECNPAGSVKNT 224
DVN+ FG + S + P G V+++
Sbjct: 1035 ASHLDVNNL-FGCSKTPSQQPPPRGRVQSS 1063
>gi|344236451|gb|EGV92554.1| Usherin [Cricetulus griseus]
Length = 1735
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 126/265 (47%), Gaps = 33/265 (12%)
Query: 1 CNCNGFSNRCFFDKE-----LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--- 52
C CN + C +D L + G GG C +CQ G NCE C+D +Y+ G +
Sbjct: 131 CQCNNHARSCHYDASVDPFPLEHSRGGGGVCDNCQHHTTGRNCESCQDYFYRPIGADPSA 190
Query: 53 --FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C C+CN G+ N L C+ G +C CK V+G +C RC YD GC+ C
Sbjct: 191 LDVCKPCDCNRAGTRNGDLLCDPIGGQCDCKRHVSGRQCLRCQDGFYDLQALDPDGCRPC 250
Query: 105 ECNPAGSVKNTPNCDSVKGQC--ESAQLSSR-GRVHTELRVQSRKNFDPAGNRIWDLRRC 161
CNP+G+V C GQC ++ + R R + + N D + C
Sbjct: 251 NCNPSGTVDGDITCHQNSGQCLCKANVIGLRCNRCNFGFKFLQSFNDD-------GCQPC 303
Query: 162 KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
+ + + GS+N CN G+C+CK G KCD C + Y + CK+C+C+ AGS
Sbjct: 304 QCNPH-----GSVNQLCNPLSGQCECKKEAKGLKCDTCREDFYGLAGSACKACDCSLAGS 358
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK NV G QC
Sbjct: 359 QAGT-TCDAETGQCVCKSNVGGRQC 382
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 109/246 (44%), Gaps = 48/246 (19%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCNS-EGRCQC 77
GG C DC+ G C +C+D +Y Q + C CNCNP G+++ + C+ G+C C
Sbjct: 215 GGQC-DCKRHVSGRQCLRCQDGFYDLQALDPDGCRPCNCNPSGTVDGDITCHQNSGQCLC 273
Query: 78 KPGVTGDKCDRCDVNH---YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G +C+RC+ F + GC+ C+CNP GSV C+ + GQCE + +
Sbjct: 274 KANVIGLRCNRCNFGFKFLQSFNDDGCQPCQCNPHGSVNQL--CNPLSGQCECKKEAKGL 331
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-----------HGGSLNLQCNSE-G 182
+ T C+ D Y L G C++E G
Sbjct: 332 KCDT----------------------CREDFYGLAGSACKACDCSLAGSQAGTTCDAETG 369
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+C CK V G +C++C ++ + C C C G+V + CD GQC CK
Sbjct: 370 QCVCKSNVGGRQCNQCLEGYFSLQQKDSFLCLPCNCEKTGTVHGSLLCDKSTGQCLCKSG 429
Query: 240 VEGAQC 245
V G +C
Sbjct: 430 VTGLRC 435
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 116/234 (49%), Gaps = 26/234 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C + Y+ Q+ C CNC G+++ L C+ S G+C CK
Sbjct: 369 GQCV-CKSNVGGRQCNQCLEGYFSLQQKDSFLCLPCNCEKTGTVHGSLLCDKSTGQCLCK 427
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +CD+C + ++ GC+ CEC+ G++ + CD V GQC L R
Sbjct: 428 SGVTGLRCDQCAPHRFNLTMGNLQGCQVCECDSLGTLPGS-ICDPVSGQCPC--LPHRQG 484
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCK-PGVTGD 193
E Q + F + C T G+++ CN G+C+C+ P TG
Sbjct: 485 RRCE---QCQPGFYTSPGHATGCLPCLCHTV-----GAMSHICNGVTGQCRCRDPSTTGQ 536
Query: 194 KCDRCDVNHYDF-GEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +C ++ F E G C+ C C+ AG++ T CD V GQC CK V G++C
Sbjct: 537 SCYQCQDGYFRFDPETGRCQPCHCHLAGALNET--CDVVTGQCFCKQFVTGSKC 588
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQC--NSEGRCQCKP 79
G CL C+ G C++C + + + N C C C+ +G+L G+C C P
Sbjct: 422 GQCL-CKSGVTGLRCDQCAPHRFNLTMGNLQGCQVCECDSLGTLPGSICDPVSGQCPCLP 480
Query: 80 GVTGDKCDRCDVNHYDF-GEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
G +C++C Y G A GC C C+ G++ + C+ V GQC S+ G+
Sbjct: 481 HRQGRRCEQCQPGFYTSPGHATGCLPCLCHTVGAMSHI--CNGVTGQCRCRDPSTTGQSC 538
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCD 196
+ + FDP + RC+ L G+LN C+ G+C CK VTG KCD
Sbjct: 539 YQCQ-DGYFRFDP------ETGRCQPCHCHLA--GALNETCDVVTGQCFCKQFVTGSKCD 589
Query: 197 RC 198
C
Sbjct: 590 MC 591
>gi|449495788|ref|XP_004175148.1| PREDICTED: LOW QUALITY PROTEIN: usherin [Taeniopygia guttata]
Length = 5209
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 131/268 (48%), Gaps = 39/268 (14%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-- 53
C C G + C +D + + G GG C +CQ + G NCE C+D +Y+++G +
Sbjct: 576 CQCYGHAESCHYDLAMDPFPQEHHRGGGGVCDNCQHNTAGRNCELCKDFHYRQAGADLSA 635
Query: 54 ---CTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C ACNCN G+ N L C+S G +C CK V+G +C++C Y+ ++ GC C
Sbjct: 636 IDVCKACNCNATGTENKSLLCDSIGGQCNCKRHVSGRQCNQCQEGFYNLQQSNPDGCSPC 695
Query: 105 ECNPAGSVKNTPNCDSVKGQC--ESAQLSSR----GRVHTELRVQSRKNFDPAGNRIWDL 158
CN +G+V C GQC ++ + R LR + +P
Sbjct: 696 NCNTSGTVNGDITCHQNSGQCKCKANVIGLRCDSCNFGFKALRYSNEDGCEP-------- 747
Query: 159 RRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
C +++ GS+N CN G+C CK V G CD C N Y GCK+CEC+
Sbjct: 748 --CWCNSH-----GSVNQFCNPLSGQCNCKERVKGLLCDTCMDNFYGLDVTGCKACECDA 800
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AGS+ T CD+ GQC CK N+ G +C
Sbjct: 801 AGSISGT-VCDARTGQCACKPNIGGRRC 827
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 113/239 (47%), Gaps = 45/239 (18%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCKPGVTG 83
C+ + G C++C D Y+ QK C CNC G++N L C+ S G+C CK GVTG
Sbjct: 818 CKPNIGGRRCDECLDGYHRVQKGHAFLCLPCNCEKAGTVNGSLLCDKSTGQCPCKAGVTG 877
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+C +C + Y+ + GC+ C C+ G++ T CD GQC L R
Sbjct: 878 LRCSQCMLQTYNLSMSNARGCQPCHCDAQGTLAGT-ACDHASGQC--VCLPQR------- 927
Query: 141 RVQSRK--------NFDPAGNRIWDLRRCKRDTYP-LGH-GGSLNLQCNS-EGRCQCK-P 188
Q R+ F P+ + C P L H GS+N C+ G+C C+
Sbjct: 928 --QGRRCDECKPGFYFSPS-----SITGC----LPCLCHIAGSVNQICDKLTGQCSCQDA 976
Query: 189 GVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG C+RC ++ F C+ C C+PAG++ T C V GQC CK V G +C
Sbjct: 977 SVTGQTCERCKELYFGFDSVTGRCQHCNCHPAGAINGT--CHLVTGQCVCKQFVTGLKC 1033
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 122/259 (47%), Gaps = 36/259 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CN G N+ + GG C +C+ G C +C++ +Y Q+S + C+ CN
Sbjct: 644 CNATGTENKSLLCDSI------GGQC-NCKRHVSGRQCNQCQEGFYNLQQSNPDGCSPCN 696
Query: 59 CNPIGSLN--LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSV 112
CN G++N + C+ G+C+CK V G +CD C+ E GC+ C CN GSV
Sbjct: 697 CNTSGTVNGDITCHQNSGQCKCKANVIGLRCDSCNFGFKALRYSNEDGCEPCWCNSHGSV 756
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
C+ + GQC + + RV L NF G + + C+ D G
Sbjct: 757 NQF--CNPLSGQC-----NCKERVKGLLCDTCMDNF--YGLDVTGCKACECDA-----AG 802
Query: 173 SLN-LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPN 226
S++ C++ G+C CKP + G +CD C ++ Y + G C C C AG+V +
Sbjct: 803 SISGTVCDARTGQCACKPNIGGRRCDEC-LDGYHRVQKGHAFLCLPCNCEKAGTVNGSLL 861
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC CK V G +C
Sbjct: 862 CDKSTGQCPCKAGVTGLRC 880
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCK-PG 80
G C+ C R G C++C+ +Y S C C C+ GS+N C+ G+C C+
Sbjct: 919 GQCV-CLPQRQGRRCDECKPGFYFSPSSITGCLPCLCHIAGSVNQICDKLTGQCSCQDAS 977
Query: 81 VTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC 125
VTG C+RC ++ F C+ C C+PAG++ T C V GQC
Sbjct: 978 VTGQTCERCKELYFGFDSVTGRCQHCNCHPAGAINGT--CHLVTGQC 1022
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 175 NLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSV 230
+L C+S G +C CK V+G +C++C Y+ ++ GC C CN +G+V C
Sbjct: 653 SLLCDSIGGQCNCKRHVSGRQCNQCQEGFYNLQQSNPDGCSPCNCNTSGTVNGDITCHQN 712
Query: 231 KGQCECKDNVEGAQCRS 247
GQC+CK NV G +C S
Sbjct: 713 SGQCKCKANVIGLRCDS 729
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQC--NSEGRCQCKPGVTGD 84
C+ G C +C Y S N C C+C+ G+L ++ G+C C P G
Sbjct: 871 CKAGVTGLRCSQCMLQTYNLSMSNARGCQPCHCDAQGTLAGTACDHASGQCVCLPQRQGR 930
Query: 85 KCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CD C Y F + GC C C+ AGSV CD + GQC S G+ +
Sbjct: 931 RCDECKPGFY-FSPSSITGCLPCLCHIAGSVNQI--CDKLTGQCSCQDASVTGQTCERCK 987
Query: 142 VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC- 198
+ FD R C+ + +P G++N C+ G+C CK VTG KCD C
Sbjct: 988 -ELYFGFDSVTGR------CQHCNCHP---AGAINGTCHLVTGQCVCKQFVTGLKCDNCV 1037
Query: 199 -DVNHYD----FGEAGCKSCECNPAGSVKNT 224
D ++ D FG + + P G V N+
Sbjct: 1038 QDASNLDVHNLFGCSKTPFQQPPPTGEVLNS 1068
>gi|410908687|ref|XP_003967822.1| PREDICTED: laminin subunit beta-1-like [Takifugu rubripes]
Length = 1812
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 115/266 (43%), Gaps = 82/266 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+RC FD + + + GG C +C + G NCE+C+ YYQ N
Sbjct: 362 CNCNQHSDRCHFDMAAFVASANVSGGVCDNCLHNTAGSNCEQCQPFYYQHPERDIRDPNI 421
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGC 101
C AC+C+P+GSL G+C+CK V G++CDRC HY G+ GC
Sbjct: 422 CEACDCDPVGSLYGGICDRMTDVWAGLIAGQCRCKGNVEGERCDRCRDAHYGLGDDPEGC 481
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
K+C C+P G++ P GN C
Sbjct: 482 KACTCSPLGTL-------------------------------------PGGNP------C 498
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAG 219
++T G C CK VTG CD+C H+ GC+ C+C+ G
Sbjct: 499 DKET----------------GSCFCKRLVTGRNCDQCVDEHWGLSNDLNGCRPCDCDLGG 542
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
++ N CD V GQC C+D++ G +C
Sbjct: 543 AINN--QCDQVSGQCVCRDHMFGRRC 566
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSEGR 74
G CL CQ +GP C+ C YY + C C CN +GS C S G+
Sbjct: 1017 GECLLCQHHSEGPACQSCMLGYYGNASLQDCRKCVCNHLGSEPSTCPSPDDCQCERSSGQ 1076
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C P VTG C +C N ++ GC+ C C+P S P+C+ + GQC S +
Sbjct: 1077 CHCLPNVTGQHCSQCTANTWNMASGGGCEPCSCHPDHSYG--PSCNEISGQC-SCRPGFG 1133
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR +E R W + G+ QCN G+C C GV+G
Sbjct: 1134 GRTCSECR-----------ELFWGSPEVECHACDCDPQGTAEPQCNKGSGQCVCVEGVSG 1182
Query: 193 DKCDRC 198
+CD C
Sbjct: 1183 PRCDVC 1188
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 109/271 (40%), Gaps = 48/271 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTA 56
C CNG ++ C G CL C+ G C++C + YY SGD +C
Sbjct: 889 CFCNGHTDEC---------EAATGRCLHCRDHSTGHTCDRCLEGYYGDPVLGSGD-YCRP 938
Query: 57 CNC-NPIGSLNLQCNS--------EGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C C + GS S C C G G +CD C +Y + G AG C+ C
Sbjct: 939 CMCPDGPGSTRQFAGSCYRGDHSQHATCVCNTGYKGARCDECSPGYYGNPGAAGGQCQPC 998
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
+CN + + +CDS G+C Q S G + N + D R+C
Sbjct: 999 QCNNNIDMLDPDSCDSRTGECLLCQHHSEGPACQSCMLGYYGN-----ASLQDCRKCV-- 1051
Query: 165 TYPLGHGGSLNLQC---------NSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCE 214
H GS C S G+C C P VTG C +C N ++ GC+ C
Sbjct: 1052 ---CNHLGSEPSTCPSPDDCQCERSSGQCHCLPNVTGQHCSQCTANTWNMASGGGCEPCS 1108
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+P S P+C+ + GQC C+ G C
Sbjct: 1109 CHPDHSYG--PSCNEISGQCSCRPGFGGRTC 1137
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 30 QGDRDGPNCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCN-SEGRCQCKPGVTGDKC 86
Q P + CR+ + S A C C+P GSL+ C S G+CQC+P V G C
Sbjct: 766 QSVVKAPVADVCRNYIFSISAMLHQGAKECQCDPQGSLSTVCEPSGGQCQCRPNVVGRNC 825
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
D C + + FG GC++C+C+P GS + CD + GQC
Sbjct: 826 DSCAPSTFQFGPNGCRACDCDPQGSRDSF--CDPLAGQC 862
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 95/231 (41%), Gaps = 39/231 (16%)
Query: 35 GPNCEKCRDNYYQKSGD--NFCTACNCNP-IGSLNL-QCNSE-GRCQ-CKPGVTGDKCDR 88
G C++C YY G C C CN I L+ C+S G C C+ G C
Sbjct: 974 GARCDECSPGYYGNPGAAGGQCQPCQCNNNIDMLDPDSCDSRTGECLLCQHHSEGPACQS 1033
Query: 89 CDVNHY-DFGEAGCKSCECNPAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
C + +Y + C+ C CN GS +T P+ D QCE S G+ H V +
Sbjct: 1034 CMLGYYGNASLQDCRKCVCNHLGSEPSTCPSPDDC--QCER----SSGQCHCLPNVTGQH 1087
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCKPGVTGDK 194
+C +T+ + GG S CN G+C C+PG G
Sbjct: 1088 -----------CSQCTANTWNMASGGGCEPCSCHPDHSYGPSCNEISGQCSCRPGFGGRT 1136
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + E C +C+C+P G+ + P C+ GQC C + V G +C
Sbjct: 1137 CSECRELFWGSPEVECHACDCDPQGTAE--PQCNKGSGQCVCVEGVSGPRC 1185
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 35 GPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 92
G NC++C D ++ S D N C C+C+ G++N QC+ G+C C+ + G +CD+ +
Sbjct: 513 GRNCDQCVDEHWGLSNDLNGCRPCDCDLGGAINNQCDQVSGQCVCRDHMFGRRCDQVESG 572
Query: 93 HYDFG 97
Y G
Sbjct: 573 FYFIG 577
>gi|268566521|ref|XP_002639744.1| C. briggsae CBR-LAM-3 protein [Caenorhabditis briggsae]
Length = 3108
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 113/232 (48%), Gaps = 44/232 (18%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
+C+ + G C++C++N+ DN C AC+CN GS+ C+ G+C CK GV G +C
Sbjct: 957 ECKENYIGSQCDRCKENH--GDVDNGCPACDCNETGSIGTDCDQVSGQCNCKQGVFGKQC 1014
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
D+C ++++F +AGC+ C CN GS+++ CD G+CE R+
Sbjct: 1015 DQCRPSYFNFTDAGCQFCHCNIYGSIEDG-KCDQASGKCE-----------------CRE 1056
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCN-SEGRCQCKPGVTGDK 194
N + +C + + G GS ++ CN G+C CKPGVTG K
Sbjct: 1057 NVEGTM-----CEKCADGYFNITSGDGCENCGCDPTGSEDVSCNLVTGQCVCKPGVTGLK 1111
Query: 195 CDRCDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD+C N Y + GC CE PA G V CD V G C C N G C
Sbjct: 1112 CDKCLPNFYGLTKEGCTECEPCPAPGQV-----CDPVDGSCVCPPNTVGEMC 1158
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 118/225 (52%), Gaps = 19/225 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G CL C G +CE C++N++ + + C C C+ GS+N QCN E G C+CK
Sbjct: 904 GKCLKCIHHTTGDSCEVCKENHWGNAQQHTCKPCGCHTQGSVNSQCNEENGECECKENYI 963
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC NH D + GC +C+CN GS+ +CD V GQC Q G+ + R
Sbjct: 964 GSQCDRCKENHGDV-DNGCPACDCNETGSIGT--DCDQVSGQCNCKQ-GVFGKQCDQCR- 1018
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVN 201
S NF AG + C + Y G + +C+ + G+C+C+ V G C++C
Sbjct: 1019 PSYFNFTDAGCQF-----CHCNIY----GSIEDGKCDQASGKCECRENVEGTMCEKCADG 1069
Query: 202 HYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+++ GC++C C+P GS +C+ V GQC CK V G +C
Sbjct: 1070 YFNITSGDGCENCGCDPTGS--EDVSCNLVTGQCVCKPGVTGLKC 1112
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 113/236 (47%), Gaps = 47/236 (19%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKC 86
+C+ + +G CEKC D Y+ + + C C C+P GS ++ CN G+C CKPGVTG KC
Sbjct: 1053 ECRENVEGTMCEKCADGYFNITSGDGCENCGCDPTGSEDVSCNLVTGQCVCKPGVTGLKC 1112
Query: 87 DRCDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
D+C N Y + GC CE PA G V CD V G C ++ G + +
Sbjct: 1113 DKCLPNFYGLTKEGCTECEPCPAPGQV-----CDPVDGSCVCPP-NTVGEMCENCTTNA- 1165
Query: 146 KNFDPAGNRIWD---LRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
WD L+ CK D +G G QCN+ G+C+CK G KCD C
Sbjct: 1166 ----------WDYHPLKGCKLCDCSDIGSDGG---QCNTLTGQCKCKEAYVGLKCDLCTH 1212
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-----------GQCECKDNVEGAQC 245
++F C+ C CN AG+ DS++ G+C CK+NV G +C
Sbjct: 1213 GFFNF--PTCEPCGCNAAGT-------DSLQCKDGQCLCNEMGECPCKENVRGQKC 1259
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 121/268 (45%), Gaps = 52/268 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGH----CLDCQGDRDGPNCEKCRDNYYQKSGDNFCTA 56
C CN S+ C + + C +C +G CE+C D Y+ + + C
Sbjct: 825 CECNNHSDVCMLTELIVAGVAAANQDDFVCTNCSLGHEGNKCEQCSDGYFGDAINGECEE 884
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPG--------VTGDKCDRCDVNHY-DFGEAGCKSCECN 107
C CN N+ + G C K G TGD C+ C NH+ + + CK C C+
Sbjct: 885 CICNG----NIDKMAIGNCDPKSGKCLKCIHHTTGDSCEVCKENHWGNAQQHTCKPCGCH 940
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
GSV + C+ G+CE ++N+ + RCK +
Sbjct: 941 TQGSVNS--QCNEENGECEC-----------------KENYIGS-----QCDRCKENHGD 976
Query: 168 LGHG---------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
+ +G GS+ C+ G+C CK GV G +CD+C ++++F +AGC+ C CN
Sbjct: 977 VDNGCPACDCNETGSIGTDCDQVSGQCNCKQGVFGKQCDQCRPSYFNFTDAGCQFCHCNI 1036
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS+++ CD G+CEC++NVEG C
Sbjct: 1037 YGSIEDG-KCDQASGKCECRENVEGTMC 1063
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 27/151 (17%)
Query: 1 CNCNGFSNRCFFDKEL----YNRTGHG-----GHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
C C ++ C +D+EL ++ T G G CLDC + +G NCE+C+D YY+ SG
Sbjct: 353 CQCFNHAHTCVYDEELDRNKWSITPEGVYEGGGRCLDCTHNTEGFNCERCKDGYYRPSGM 412
Query: 51 ----DNFCTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDF 96
++ C C C+P+GS++ C G C CKPG G +C+RC + +
Sbjct: 413 SHYREDACRTCECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGYRN- 471
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C+ C CN AGSV N CD QC++
Sbjct: 472 -HPTCEPCPCNRAGSV-NFDTCDGASCQCKA 500
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 108/265 (40%), Gaps = 44/265 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD----NFCTA 56
CNC G S+ C G C +CQ + G CE C+ YY D C
Sbjct: 774 CNCEGHSDDC---------DPFTGECFNCQHNTTGSRCELCKPGYYGNPSDGGELGSCMP 824
Query: 57 CNCN-----------PIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEAGCKS 103
C CN + + + C C G G+KC++C ++ D C+
Sbjct: 825 CECNNHSDVCMLTELIVAGVAAANQDDFVCTNCSLGHEGNKCEQCSDGYFGDAINGECEE 884
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C CN NCD G+C + G V ++ A CK
Sbjct: 885 CICNGNIDKMAIGNCDPKSGKCLKCIHHTTG---DSCEVCKENHWGNAQQHT-----CK- 935
Query: 164 DTYPLG--HGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
P G GS+N QCN E G C+CK G +CDRC NH D + GC +C+CN GS
Sbjct: 936 ---PCGCHTQGSVNSQCNEENGECECKENYIGSQCDRCKENHGDV-DNGCPACDCNETGS 991
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD V GQC CK V G QC
Sbjct: 992 IGT--DCDQVSGQCNCKQGVFGKQC 1014
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQ 76
G G C C+ G CE C YY Q G CT C+C+P GSL+ CN G+C+
Sbjct: 1605 GRGYICDACKPGYTGQYCETCVAGYYGDPQHIGGT-CTLCDCHPDGSLHGACNPLTGQCE 1663
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
CKPGVTG C C H F C SC+
Sbjct: 1664 CKPGVTGRTCSMCQERH-AFINRVCTSCD 1691
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPI-GSLNLQC--NSEGRC---- 75
C DC+ + G CE C Y ++ G N CT C C + S + C S GR
Sbjct: 1552 CTDCENNTFGDFCEHCLAGYIGDAREGGANACTKCACPLVENSFSDSCVPVSHGRGYICD 1611
Query: 76 QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCE 126
CKPG TG C+ C +Y D G C C+C+P GS+ C+ + GQCE
Sbjct: 1612 ACKPGYTGQYCETCVAGYYGDPQHIGGTCTLCDCHPDGSLHGA--CNPLTGQCE 1663
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
CKPG TG C+ C +Y D G C C+C+P GS+ C+ + GQCECK V G
Sbjct: 1613 CKPGYTGQYCETCVAGYYGDPQHIGGTCTLCDCHPDGSLHGA--CNPLTGQCECKPGVTG 1670
Query: 243 AQC 245
C
Sbjct: 1671 RTC 1673
>gi|410978983|ref|XP_003995866.1| PREDICTED: multiple EGF-like-domains 9 [Felis catus]
Length = 409
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 107/221 (48%), Gaps = 12/221 (5%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G +C+ CR+ +Y C C+C+P G+L++ C+S G+CQCK GVTG CD
Sbjct: 32 ECQPHYQGLHCDICREGFYLNHTSGLCLPCDCSPHGALSMLCSSSGKCQCKVGVTGSTCD 91
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +YDF ++GC C+CN + CD++ G C + Q +S+G H E + R+
Sbjct: 92 RCQDGYYDFSKSGCLPCQCN-----NRSATCDALTGACLNCQENSKGD-HCE---ECREG 142
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
F + + + RC + L QCK G TG C+ C +Y+ +
Sbjct: 143 FYQSPDATKECLRCPCSAVTSTGSCIIKLGDLEPTCVQCKDGYTGRNCNTCGNGYYN-SD 201
Query: 208 AGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
+ C C+C+ TP C G+C C N G C
Sbjct: 202 SICTKCQCHGHVDPIKTPKVCKPESGECISCLHNTTGFWCE 242
>gi|449474133|ref|XP_004176995.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-2 [Taeniopygia
guttata]
Length = 1698
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 122/275 (44%), Gaps = 55/275 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S RC FD +Y TG+ G C DCQ + G +C C+ YY+ +
Sbjct: 12 CDCNEHSRRCHFDMAVYLATGNTSGAVCDDCQHNTMGRHCHLCKPFYYRHPRSDIRSPTA 71
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P GSL+ G+C+CK V G +CDRC Y G
Sbjct: 72 CAPCDCDPAGSLDGGACDGHTDVALGMIAGQCRCKENVAGPRCDRCRHGAYGLSHGDPQG 131
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C C+P G+V + CD + G C + + GR ++ + W L
Sbjct: 132 CQPCRCDPRGTVAGSSPCDPISGDCYCKRFVA-GRSCSQCVPE-----------FWGL-- 177
Query: 161 CKRDTYPLG--------HGGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
+Y LG GG+ N + + G+C+C+PG G +CD+C H+ F C+
Sbjct: 178 ----SYDLGGCRPCACDFGGAYNNRWGTAHGQCRCQPGTVGRQCDQCQPGHWGF--PACR 231
Query: 212 SCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
C+CN + CD G C C+D+ G C
Sbjct: 232 PCQCN-----GHAEECDPRTGTCLRCRDHTSGRHC 261
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 100/262 (38%), Gaps = 49/262 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG + C G CL C+ DG C++C ++ C C
Sbjct: 795 CQCNGHAESC---------DPRTGSCLRCRDHTDGERCQRCAAGHFGNPALGSGQHCRPC 845
Query: 58 NCNPIGS-----LNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG-CKSCE 105
C P G C + R C C PG TG +CD C +Y D + G C C+
Sbjct: 846 PC-PEGPSTPRHFAASCYQDSRSQQVICHCSPGYTGSRCDECAPGYYGDPLQGGRCLPCQ 904
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ V + CD GQC V+ + + +P G D C
Sbjct: 905 CHDNIDVTDPEACDRRTGQCLRC-------VYITCLLVPGCSCNPLGT---DPSTC---- 950
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKN 223
G C+ G+C C P V G CDRC N ++ GC+ C C+P S+
Sbjct: 951 ------GPQQCHCDRHSGQCHCLPNVEGQSCDRCSPNFWNLASGQGCQPCACHPQHSL-- 1002
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
TP C+ GQC C+ G C
Sbjct: 1003 TPTCNQFTGQCSCRPGFGGRTC 1024
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 26/157 (16%)
Query: 53 FCTACNCNPIGSLNLQCNSE--------GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKS 103
C+CNP+G+ C + G+C C P V G CDRC N ++ GC+
Sbjct: 934 LVPGCSCNPLGTDPSTCGPQQCHCDRHSGQCHCLPNVEGQSCDRCSPNFWNLASGQGCQP 993
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C C+P S+ TP C+ GQC S + GR T+ Q DP ++C+
Sbjct: 994 CACHPQHSL--TPTCNQFTGQC-SCRPGFGGRTCTD--CQEHHWGDPR-------QQCRA 1041
Query: 164 -DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
D P G + QC+ S G C C+PG++G +CD+C
Sbjct: 1042 CDCDPRGIASA---QCHRSSGHCDCRPGISGVRCDQC 1075
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
H G C C + +G +C++C N++ + C C C+P SL CN G+C C+PG
Sbjct: 960 HSGQC-HCLPNVEGQSCDRCSPNFWNLASGQGCQPCACHPQHSLTPTCNQFTGQCSCRPG 1018
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G C C +H+ C++C+C+P G + C G C+
Sbjct: 1019 FGGRTCTDCQEHHWGDPRQQCRACDCDPRGIA--SAQCHRSSGHCD 1062
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P E C + S + +C C+P GSL+ +C +G +CQCKP V G +C RC
Sbjct: 678 PVAEPCSSLLHSLSAILHDGALSCLCDPQGSLSAECQPQGGQCQCKPNVMGRRCHRCSPG 737
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GC+ C+C+ GSV CDS GQC
Sbjct: 738 TFGFGPGGCRPCQCSREGSVSTI--CDSTTGQC 768
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 94/229 (41%), Gaps = 36/229 (15%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
GG C C+ + G C +C G C C C+ GS++ C+S G+C C+ G
Sbjct: 716 QGGQC-QCKPNVMGRRCHRC-SPGTFGFGPGGCRPCQCSREGSVSTICDSTTGQCPCREG 773
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE- 139
G +CDRC H+ F C+ C+CN + +CD G C R R HT+
Sbjct: 774 THGPRCDRCQPGHWGF--PVCRPCQCN-----GHAESCDPRTGSC------LRCRDHTDG 820
Query: 140 ---LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS----LNLQCNSEGR-----CQCK 187
R + +PA R C P G S C + R C C
Sbjct: 821 ERCQRCAAGHFGNPALGSGQHCRPC-----PCPEGPSTPRHFAASCYQDSRSQQVICHCS 875
Query: 188 PGVTGDKCDRCDVNHY-DFGEAG-CKSCECNPAGSVKNTPNCDSVKGQC 234
PG TG +CD C +Y D + G C C+C+ V + CD GQC
Sbjct: 876 PGYTGSRCDECAPGYYGDPLQGGRCLPCQCHDNIDVTDPEACDRRTGQC 924
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
SL CN G+C C+PG G C C +H+ C++C+C+P G + C
Sbjct: 1001 SLTPTCNQFTGQCSCRPGFGGRTCTDCQEHHWGDPRQQCRACDCDPRGIA--SAQCHRSS 1058
Query: 232 GQCECKDNVEGAQC 245
G C+C+ + G +C
Sbjct: 1059 GHCDCRPGISGVRC 1072
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 21/90 (23%)
Query: 2 NCNGFSNRCFFDKELYNRTGHGGH-CLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CN F+ +C R G GG C DCQ G ++CR AC+C+
Sbjct: 1005 TCNQFTGQCSC------RPGFGGRTCTDCQEHHWGDPRQQCR-------------ACDCD 1045
Query: 61 PIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
P G + QC+ S G C C+PG++G +CD+C
Sbjct: 1046 PRGIASAQCHRSSGHCDCRPGISGVRCDQC 1075
>gi|149040991|gb|EDL94948.1| rCG20263, isoform CRA_b [Rattus norvegicus]
Length = 1003
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 129/266 (48%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-- 52
C C+G ++ C +D + YNR G GG C DCQ G NCE C+D +Y+ G +
Sbjct: 571 CQCHGHASSCHYDASMDPFPLEYNRGG-GGVCDDCQHHTTGRNCESCQDYFYRPIGADPA 629
Query: 53 ---FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
C C+CN G+ N L C+ G +C CK V+G +C RC + Y GC+
Sbjct: 630 DPEVCKHCDCNRDGTRNGSLLCDLVGGQCDCKRRVSGRRCFRCHIGFYGLQALDPDGCRP 689
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+CNP+G+V C GQC S + V LR R +F G + LR
Sbjct: 690 CDCNPSGTVDGDITCHHNSGQC-----SCKANV-IGLRCD-RCSF---GFKF--LRSLNA 737
Query: 164 DTYPLGH---GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
D H GS+N C+ G+C CK G +CD C N Y + C+ C+CN AG
Sbjct: 738 DGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLPWSACEVCDCNRAG 797
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ T CD+ GQC CK +V G +C
Sbjct: 798 TQAGT-VCDAETGQCVCKPSVGGRRC 822
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 107/236 (45%), Gaps = 28/236 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQC 77
GG C DC+ G C +C +Y Q + C C+CNP G+++ + C+ + G+C C
Sbjct: 655 GGQC-DCKRRVSGRRCFRCHIGFYGLQALDPDGCRPCDCNPSGTVDGDITCHHNSGQCSC 713
Query: 78 KPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
K V G +CDRC + F + GC+ C CN GSV CD + GQC + +
Sbjct: 714 KANVIGLRCDRCSFG-FKFLRSLNADGCEPCHCNLHGSVNQL--CDPLSGQCVCKKEAKG 770
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTG 192
R R+NF ++ C R G C++E G+C CKP V G
Sbjct: 771 LRCDV-----CRENFYGLPWSACEVCDCNRA------GTQAGTVCDAETGQCVCKPSVGG 819
Query: 193 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C +++ + C C C G+V + CD GQC CK V G +C
Sbjct: 820 RRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCKLGVTGLRC 875
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 20/226 (8%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + + C C+CN GS+N C+ G+C CK G +
Sbjct: 713 CKANVIGLRCDRCSFGFKFLRSLNADGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLR 772
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y + C+ C+CN AG+ T CD+ GQC + S GR +E + +
Sbjct: 773 CDVCRENFYGLPWSACEVCDCNRAGTQAGT-VCDAETGQC-VCKPSVGGRRCSECK-EGY 829
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKCDRCDVNH 202
N + + C++ G++N L C+ S G+C CK GVTG +C +C+ +
Sbjct: 830 FNLRQNDSHLCLPCNCEKT-------GTVNGSLLCDKSTGQCPCKLGVTGLRCHQCEPHR 882
Query: 203 YDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ GC++CEC+ G++ + CD V GQC C + +G +C
Sbjct: 883 FNLTVDNLQGCQACECDSLGTLPGS-TCDPVSGQCLCLPHRQGRRC 927
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 10/110 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ G C +C++ Y+ +++ + C CNC G++N L C+ S G+C CK
Sbjct: 809 GQCV-CKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCK 867
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQC 125
GVTG +C +C+ + ++ GC++CEC+ G++ + CD V GQC
Sbjct: 868 LGVTGLRCHQCEPHRFNLTVDNLQGCQACECDSLGTLPGS-TCDPVSGQC 916
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS-LNLQCNSE-GRCQCKPGV 81
G C+ C+ + G C+ CR+N+Y C C+CN G+ C++E G+C CKP V
Sbjct: 760 GQCV-CKKEAKGLRCDVCRENFYGLPWSA-CEVCDCNRAGTQAGTVCDAETGQCVCKPSV 817
Query: 82 TGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G +C C +++ + C C C G+V + CD GQC + R H
Sbjct: 818 GGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCKLGVTGLRCHQ 877
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
F+ + + + C+ D+ G + + G+C C P G +C+RC
Sbjct: 878 ----CEPHRFNLTVDNLQGCQACECDSLGTLPGSTCD---PVSGQCLCLPHRQGRRCERC 930
>gi|393911284|gb|EFO27124.2| laminin alpha 1 chain [Loa loa]
Length = 3329
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 115/223 (51%), Gaps = 26/223 (11%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
DC + G C +C+D + +N C ACNCN GS + +C+ G+C CK GV G +C
Sbjct: 951 DCHNNYVGMQCNRCKDGH--GDIENKCPACNCNMTGSFSSECDEVSGQCACKTGVFGKQC 1008
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
D C ++++F E GC+ C CN G+V + CD+V G+CE + + +G++ K
Sbjct: 1009 DMCRASYFNFSENGCQFCHCNSFGAVDDG-RCDNVTGKCECRE-NVKGKM-------CEK 1059
Query: 147 NFDPAGNRIWDL--RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
D N L + C D PLG G +QC++ G+C CK GV G KCD+C NH+
Sbjct: 1060 CADGYFNITSGLGCQVCACD--PLGSEG---IQCDTHTGQCACKSGVIGLKCDKCAPNHF 1114
Query: 204 DFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GCK C PA G + C S G+C C N G C
Sbjct: 1115 GLDSNGCKECRVCPAPGHI-----CHSTTGECICPRNTIGEMC 1152
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 111/231 (48%), Gaps = 33/231 (14%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C+ + G CEKC D Y+ + C C C+P+GS +QC++ G+C CK GV G KC
Sbjct: 1047 ECRENVKGKMCEKCADGYFNITSGLGCQVCACDPLGSEGIQCDTHTGQCACKSGVIGLKC 1106
Query: 87 DRCDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCESAQLSSRGRVHTELR--VQ 143
D+C NH+ GCK C PA G + C S G+C + R +
Sbjct: 1107 DKCAPNHFGLDSNGCKECRVCPAPGHI-----CHSTTGEC----ICPRNTIGEMCENCSN 1157
Query: 144 SRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVN 201
+ N+DP L C D +G G CN E G+C C+ G G KCDRC
Sbjct: 1158 NAWNYDP-------LNGCTLCDCSGIGADGP---NCNPENGQCHCRVGFVGLKCDRCIHG 1207
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPN-----CDSVKGQCECKDNVEGAQCRS 247
H++F + C+ C C+ G+ T CD + GQC CK NV G +C S
Sbjct: 1208 HFNFPQ--CELCNCDLLGTDPTTCKDGACLCDEI-GQCSCKKNVIGLKCDS 1255
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C+ C + G CE C +N + N CT C+C+ IG+ CN E G+C C+ G
Sbjct: 1139 GECI-CPRNTIGEMCENCSNNAWNYDPLNGCTLCDCSGIGADGPNCNPENGQCHCRVGFV 1197
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G KCDRC H++F + C+ C C+ G+
Sbjct: 1198 GLKCDRCIHGHFNFPQ--CELCNCDLLGT 1224
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 99/280 (35%), Gaps = 68/280 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
CNC G S C G C++CQ + G C +C +Y
Sbjct: 762 CNCEGHSFEC---------DPFTGDCINCQHNTTGRRCHQCLPGHYGNPSLGGELGQCRP 812
Query: 47 ------QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGE 98
+ S C+ G+ ++ C G G+KC+ C + E
Sbjct: 813 CACPTIENSHSAMCSLTQLIVGGAAAYGEDAYVCTACDHGYDGNKCEICADGFFGDPLTE 872
Query: 99 AG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
G C+ C+CN NCD G+C ++ G H E
Sbjct: 873 NGTCELCDCNGNIDPMAIGNCDRKTGKCLKCIYNTAGD-HCE------------------ 913
Query: 158 LRRCKRDTY---------PLG--HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 205
CK + + P G G+ + CN S G C C G +C+RC H D
Sbjct: 914 --ECKENHWGNPKDKSCRPCGCHPKGARSATCNKSTGVCDCHNNYVGMQCNRCKDGHGDI 971
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
E C +C CN GS + CD V GQC CK V G QC
Sbjct: 972 -ENKCPACNCNMTGSF--SSECDEVSGQCACKTGVFGKQC 1008
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 60/179 (33%), Gaps = 74/179 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYY---- 46
C C + C +D+E+ R G GG C+ C+ + DG NCE+C Y+
Sbjct: 344 CQCFNHATHCEYDEEV-ERLGLSVTPEGIFEGGGRCVACKHNTDGINCERCLWTYFRPSG 402
Query: 47 ----------------------------------QKSGD--------------------N 52
QK GD N
Sbjct: 403 VTHYREDACRPCDCDPIGSEHNNCVRDETSADGDQKPGDCICKPGFGGRRCDVCAPGYRN 462
Query: 53 F--CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC---DVNHYDFGEAGCKSCEC 106
+ C C CN GSLN E +C CKP V G CDRC +N GC+ C C
Sbjct: 463 YPKCEPCPCNRAGSLNFNTCEEEQCICKPNVEGLYCDRCKEGTINLDMKNPKGCQPCFC 521
>gi|119621567|gb|EAX01162.1| hCG2038552, isoform CRA_b [Homo sapiens]
Length = 1284
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 124/268 (46%), Gaps = 36/268 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 320 CNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 379
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C + +Y+F C
Sbjct: 380 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAIGYYNF-----PFCLR 433
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA--GNRIWDLRRCKRD 164
P V + D V G + + G + R P G R D R
Sbjct: 434 IPIFPVSTPSSEDPVAGDIKGCDCNLEGVLPEICDAHGRCLCRPGVEGPRC-DTCRSGFY 492
Query: 165 TYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
++P+ GS + C+S G+C+C+PGVTG +CDRC YDF S C+P
Sbjct: 493 SFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSACDP 552
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AG++ +S G C+CK +VEG C
Sbjct: 553 AGTI------NSNLGYCQCKLHVEGPTC 574
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 44/238 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 471 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 526
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ +S G C+ ++H E
Sbjct: 527 GQRCDRCLSGAYDFPHCQGSSSACDPAGTI------NSNLGYCQC-------KLHVEGPT 573
Query: 143 QSRKNFDPAGNRIWDLR----------RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
SR W+L +C + G G +C +G C CK V
Sbjct: 574 CSRCKL-----LYWNLDKENPSGCSECKCHKAGTVSGTG-----ECRQGDGDCHCKSHVG 623
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 624 GDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSM--CSGPSGVCQCREHVVGKVCQ 679
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 105/240 (43%), Gaps = 44/240 (18%)
Query: 29 CQGDRDGPNCEKCRDNYY--------------------QKSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCEKC YY +GD C+CN G L
Sbjct: 409 CKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGD--IKGCDCNLEGVLPEI 466
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C++ GRC C+PGV G +CD C Y F C++C C+ GS + C SV GQCE
Sbjct: 467 CDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP--CSSVTGQCECR 522
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
+ R D + +D C+ + G++N ++ G CQCK
Sbjct: 523 PGVTGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTIN---SNLGYCQCKL 567
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C RC + +++ + +GC C+C+ AG+V T C G C CK +V G C
Sbjct: 568 HVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSC 627
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 101/264 (38%), Gaps = 63/264 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN--------------PIGSLN 66
+CQ G C++C Y Q+ + C ACNC+ SLN
Sbjct: 284 ECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASNCYYDPDVERQQASLN 343
Query: 67 LQCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPN 117
Q G C+ G C++C +Y +G GC C C+P ++
Sbjct: 344 TQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDP----EHADG 399
Query: 118 CDSVKGQCE----------------SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
C+ G+C R+ V + + DP D++ C
Sbjct: 400 CEQGSGRCHCKPNFHGDNCEKCAIGYYNFPFCLRIPI-FPVSTPSSEDPVAG---DIKGC 455
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+ G L C++ GRC C+PGV G +CD C Y F C++C C+ GS
Sbjct: 456 DCNL-----EGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSY 508
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ C SV GQCEC+ V G +C
Sbjct: 509 QMP--CSSVTGQCECRPGVTGQRC 530
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ EG +C C+P V G +C RC HY
Sbjct: 1214 NSARSLVAFYHKGA----LPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYG 1269
Query: 96 F 96
F
Sbjct: 1270 F 1270
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 618 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKV 677
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 678 CQRPENNYY 686
>gi|312067869|ref|XP_003136946.1| laminin alpha 1 chain [Loa loa]
Length = 3400
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 115/223 (51%), Gaps = 26/223 (11%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
DC + G C +C+D + +N C ACNCN GS + +C+ G+C CK GV G +C
Sbjct: 974 DCHNNYVGMQCNRCKDGH--GDIENKCPACNCNMTGSFSSECDEVSGQCACKTGVFGKQC 1031
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
D C ++++F E GC+ C CN G+V + CD+V G+CE + + +G++ K
Sbjct: 1032 DMCRASYFNFSENGCQFCHCNSFGAVDDG-RCDNVTGKCECRE-NVKGKM-------CEK 1082
Query: 147 NFDPAGNRIWDL--RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
D N L + C D PLG G +QC++ G+C CK GV G KCD+C NH+
Sbjct: 1083 CADGYFNITSGLGCQVCACD--PLGSEG---IQCDTHTGQCACKSGVIGLKCDKCAPNHF 1137
Query: 204 DFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GCK C PA G + C S G+C C N G C
Sbjct: 1138 GLDSNGCKECRVCPAPGHI-----CHSTTGECICPRNTIGEMC 1175
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 111/231 (48%), Gaps = 33/231 (14%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C+ + G CEKC D Y+ + C C C+P+GS +QC++ G+C CK GV G KC
Sbjct: 1070 ECRENVKGKMCEKCADGYFNITSGLGCQVCACDPLGSEGIQCDTHTGQCACKSGVIGLKC 1129
Query: 87 DRCDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCESAQLSSRGRVHTELR--VQ 143
D+C NH+ GCK C PA G + C S G+C + R +
Sbjct: 1130 DKCAPNHFGLDSNGCKECRVCPAPGHI-----CHSTTGEC----ICPRNTIGEMCENCSN 1180
Query: 144 SRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVN 201
+ N+DP L C D +G G CN E G+C C+ G G KCDRC
Sbjct: 1181 NAWNYDP-------LNGCTLCDCSGIGADGP---NCNPENGQCHCRVGFVGLKCDRCIHG 1230
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPN-----CDSVKGQCECKDNVEGAQCRS 247
H++F + C+ C C+ G+ T CD + GQC CK NV G +C S
Sbjct: 1231 HFNFPQ--CELCNCDLLGTDPTTCKDGACLCDEI-GQCSCKKNVIGLKCDS 1278
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 28/137 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
C C + C +D+E+ R G GG C+ C+ + DG NCE+C Y++ SG
Sbjct: 367 CQCFNHATHCEYDEEV-ERLGLSVTPEGIFEGGGRCVACKHNTDGINCERCLWTYFRPSG 425
Query: 51 -----DNFCTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYD 95
++ C C+C+PIGS + C G C CKPG G +CD C + +
Sbjct: 426 VTHYREDACRPCDCDPIGSEHNNCVRDETSADGDQKPGDCICKPGFGGRRCDVCAPGYRN 485
Query: 96 FGEAGCKSCECNPAGSV 112
+ + C+ C CN AGS+
Sbjct: 486 YPK--CEPCPCNRAGSL 500
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C+ C + G CE C +N + N CT C+C+ IG+ CN E G+C C+ G
Sbjct: 1162 GECI-CPRNTIGEMCENCSNNAWNYDPLNGCTLCDCSGIGADGPNCNPENGQCHCRVGFV 1220
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G KCDRC H++F + C+ C C+ G+
Sbjct: 1221 GLKCDRCIHGHFNFPQ--CELCNCDLLGT 1247
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG G +CD C + ++ + C+ C CN AGS+ N C+ + QC CK NVE
Sbjct: 463 GDCICKPGFGGRRCDVCAPGYRNYPK--CEPCPCNRAGSL-NFNTCE--EEQCICKPNVE 517
Query: 242 GAQC 245
G C
Sbjct: 518 GLYC 521
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 99/280 (35%), Gaps = 68/280 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
CNC G S C G C++CQ + G C +C +Y
Sbjct: 785 CNCEGHSFEC---------DPFTGDCINCQHNTTGRRCHQCLPGHYGNPSLGGELGQCRP 835
Query: 47 ------QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGE 98
+ S C+ G+ ++ C G G+KC+ C + E
Sbjct: 836 CACPTIENSHSAMCSLTQLIVGGAAAYGEDAYVCTACDHGYDGNKCEICADGFFGDPLTE 895
Query: 99 AG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
G C+ C+CN NCD G+C ++ G H E
Sbjct: 896 NGTCELCDCNGNIDPMAIGNCDRKTGKCLKCIYNTAGD-HCE------------------ 936
Query: 158 LRRCKRDTY---------PLG--HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 205
CK + + P G G+ + CN S G C C G +C+RC H D
Sbjct: 937 --ECKENHWGNPKDKSCRPCGCHPKGARSATCNKSTGVCDCHNNYVGMQCNRCKDGHGDI 994
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
E C +C CN GS + CD V GQC CK V G QC
Sbjct: 995 -ENKCPACNCNMTGSF--SSECDEVSGQCACKTGVFGKQC 1031
>gi|395506727|ref|XP_003757682.1| PREDICTED: laminin subunit alpha-5 [Sarcophilus harrisii]
Length = 3765
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 111/234 (47%), Gaps = 29/234 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ + DGP+C++C+ Y+ C C+C+P GSL+ C+ G C C+PG G C
Sbjct: 657 CRPEFDGPHCDRCQAGYHSYP---HCRVCSCDPRGSLDELCSGAGMCHCRPGYAGSACQE 713
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-----------CESAQLSSRGRVH 137
C +Y F C +C+C+ AGS+ T C+ GQ C++ + G H
Sbjct: 714 CAPGYYGF--PNCVACQCSEAGSLHIT--CEPETGQCNCRPRVTGLHCDTCVPGTYGFPH 769
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS-LNLQCNSEGRCQCKPGVTGDKCD 196
E R S DPAG + + H + L+ ++G C+C+ V G +CD
Sbjct: 770 CEGRSAS---CDPAGQ----VSVSSSPAEVMKHTSALLSSLSKTQGSCECRAHVEGPRCD 822
Query: 197 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
RC +++ GC SC C+P G++ C GQC CK NV G +C S
Sbjct: 823 RCKPLYWNLSPTNPYGCSSCSCDPRGTISGVAECQQGNGQCFCKPNVCGQKCTS 876
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 109/232 (46%), Gaps = 23/232 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ G C++C YY G C AC C+ GSL++ C E G+C C+P VTG CD
Sbjct: 702 CRPGYAGSACQECAPGYY---GFPNCVACQCSEAGSLHITCEPETGQCNCRPRVTGLHCD 758
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
C Y F +S C+PAG V + + V SA LSS + T+ + R +
Sbjct: 759 TCVPGTYGFPHCEGRSASCDPAGQVSVSSSPAEVMKHT-SALLSSLSK--TQGSCECRAH 815
Query: 148 FD-PAGNRIWDLRRCKRDTYPLG-------HGGSLN--LQCNS-EGRCQCKPGVTGDKCD 196
+ P +R L T P G G+++ +C G+C CKP V G KC
Sbjct: 816 VEGPRCDRCKPLYWNLSPTNPYGCSSCSCDPRGTISGVAECQQGNGQCFCKPNVCGQKCT 875
Query: 197 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C ++ +A GCK+C+C+ G++ C+ G C+C+ N +G C
Sbjct: 876 SCKDGYFRLDQADYFGCKTCQCDIGGALAQ--GCEPRMGTCQCRPNTQGPTC 925
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 121/263 (46%), Gaps = 41/263 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTA 56
C+CNG S+RC G C+ CQ + +G +CE+C+D + Q +FC +
Sbjct: 1930 CHCNGHSDRCL---------PGSGICVGCQHNTEGDHCERCKDGFVSNATQDQSSSFCIS 1980
Query: 57 CNCN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
C C P + + C +G +C C+PG G C+RC +Y + C+ C+C+
Sbjct: 1981 CPCPLSVPSNNFAVGCVHKGGVTQCLCQPGYAGTSCERCAPGYYGNPLVIGSSCQPCDCS 2040
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DT 165
G +CD + G C + G H E GN + R C + D
Sbjct: 2041 GNGDPNMLFSHCDPLTGACLGCMYHTAGP-HCESCAPGYY-----GNALLP-RNCTKCDC 2093
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
P G C++ G+C+CK GVTG +CDRC HY F GC+ C C G+V +
Sbjct: 2094 SPCG-----TEVCDARTGQCRCKAGVTGQRCDRCQDGHYGFDSCGGCQPCNCG-LGAVGS 2147
Query: 224 TPNCDSVKGQCECKDNVEGAQCR 246
+ C S GQC C+ V G QC+
Sbjct: 2148 S--CHSQSGQCHCRAGVSGTQCQ 2168
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 113/289 (39%), Gaps = 74/289 (25%)
Query: 1 CNCNGFSNRCFFDKELY---------NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G ++ C++D E+ N GG C+DCQ G NCE+C YY+
Sbjct: 408 CNCHGHAHDCYYDPEVDRHRASKNRDNVYEGGGVCIDCQHHTTGINCERCVPGYYRSPEH 467
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC--------------DVN 92
C CNC + + GRC CKP TG++CD C +
Sbjct: 468 PIDSPYVCYRCNCESDFTDGTCEDLTGRCYCKPNYTGERCDACAKGFTDFPHCYPVPSFS 527
Query: 93 HYDFGEAGCKS-----CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
H D GE + C+C+ AG++ N D GQC + N
Sbjct: 528 HNDTGEQVLPAGQIVNCDCSAAGTLGNACRKDPHIGQCV-----------------CKPN 570
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-----------NSEGRCQCKPGVTGDKCD 196
F C++ G L QC N G+C C+ G G CD
Sbjct: 571 FQGV--------HCEQCAPGFFGPGCLPCQCSGPGQTGSSCDNETGQCVCRTGFEGPACD 622
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
RC ++ + C+ C C+PAG++ CD G+C C+ +G C
Sbjct: 623 RCAPGYFSY--PLCQLCGCSPAGTLPEA--CDE-SGRCFCRPEFDGPHC 666
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+CKP V G +CD C Y G C+ C+C+ AG+V CD V GQC CKDNVE
Sbjct: 1614 GQCRCKPNVVGRRCDTCAPGFY--GYPSCQRCQCHEAGTVAGV--CDPVTGQCHCKDNVE 1669
Query: 242 GAQC 245
G +C
Sbjct: 1670 GGRC 1673
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 78/187 (41%), Gaps = 34/187 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL C GP+CE C YY + CT C+C+P G+ + G+C+CK GVT
Sbjct: 2057 GACLGCMYHTAGPHCESCAPGYYGNALLPRNCTKCDCSPCGTEVCDART-GQCRCKAGVT 2115
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CDRC HY F GC+ C C G+V ++ C S GQC
Sbjct: 2116 GQRCDRCQDGHYGFDSCGGCQPCNCG-LGAVGSS--CHSQSGQCHCR------------- 2159
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS------EGRCQCKPGVTGDKC 195
AG ++C + G QC G C C PG++G +C
Sbjct: 2160 ---------AGVSGTQCQQCAPGYWGFNEHGCTRCQCQGGHCDPRTGECTCPPGLSGKQC 2210
Query: 196 DRCDVNH 202
D C H
Sbjct: 2211 DSCSHQH 2217
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ +GP C++C Y+ C C C+P G+L C+ GRC C+P G
Sbjct: 608 GQCV-CRTGFEGPACDRCAPGYFSYP---LCQLCGCSPAGTLPEACDESGRCFCRPEFDG 663
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
CDRC ++ + C+ C C+P GS+
Sbjct: 664 PHCDRCQAGYHSYPH--CRVCSCDPRGSL 690
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 97/235 (41%), Gaps = 50/235 (21%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTA-----CNCNPIGSLNLQCNSE---GRCQCKPG 80
+G D P+C + +G+ A C+C+ G+L C + G+C CKP
Sbjct: 511 AKGFTDFPHCYPVPSFSHNDTGEQVLPAGQIVNCDCSAAGTLGNACRKDPHIGQCVCKPN 570
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G C++C F GC C+C+ G ++ CD+ GQC
Sbjct: 571 FQGVHCEQCAPG---FFGPGCLPCQCSGPGQTGSS--CDNETGQCVC------------- 612
Query: 141 RVQSRKNFD-PAGNRIWDLRRCK--RDTYPL------GHGGSLNLQCNSEGRCQCKPGVT 191
R F+ PA +R C +YPL G+L C+ GRC C+P
Sbjct: 613 ----RTGFEGPACDR------CAPGYFSYPLCQLCGCSPAGTLPEACDESGRCFCRPEFD 662
Query: 192 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G CDRC ++ + C+ C C+P GS+ C S G C C+ G+ C+
Sbjct: 663 GPHCDRCQAGYHSYPH--CRVCSCDPRGSLDEL--C-SGAGMCHCRPGYAGSACQ 712
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVT 82
+C+ +GP C++C+ Y+ S N C++C+C+P G+++ +C G+C CKP V
Sbjct: 811 ECRAHVEGPRCDRCKPLYWNLSPTNPYGCSSCSCDPRGTISGVAECQQGNGQCFCKPNVC 870
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
G KC C ++ +A GCK+C+C+ G++ C+ G C+
Sbjct: 871 GQKCTSCKDGYFRLDQADYFGCKTCQCDIGGALAQ--GCEPRMGTCQ 915
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 94/230 (40%), Gaps = 35/230 (15%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS----EGRCQ-CKPGV 81
CQ G +CE+C YY + C C+C+ G N+ + G C C
Sbjct: 2007 CQPGYAGTSCERCAPGYYGNPLVIGSSCQPCDCSGNGDPNMLFSHCDPLTGACLGCMYHT 2066
Query: 82 TGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C+ C +Y C C+C+P G T CD+ GQC + R
Sbjct: 2067 AGPHCESCAPGYYGNALLPRNCTKCDCSPCG----TEVCDARTGQCRCKAGVTGQRCD-- 2120
Query: 140 LRVQ-SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
R Q FD G C+ LG GS C+S+ G+C C+ GV+G +C +
Sbjct: 2121 -RCQDGHYGFDSCGG-------CQPCNCGLGAVGS---SCHSQSGQCHCRAGVSGTQCQQ 2169
Query: 198 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C ++ F E GC C+C +CD G+C C + G QC S
Sbjct: 2170 CAPGYWGFNEHGCTRCQCQGG-------HCDPRTGECTCPPGLSGKQCDS 2212
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G+C+CKP V G +CD C Y G C+ C+C+ AG+V CD V GQC
Sbjct: 1614 GQCRCKPNVVGRRCDTCAPGFY--GYPSCQRCQCHEAGTVAGV--CDPVTGQC 1662
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 27/150 (18%)
Query: 65 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSV 121
L+ ++G C+C+ V G +CDRC +++ GC SC C+P G++ C
Sbjct: 800 LSSLSKTQGSCECRAHVEGPRCDRCKPLYWNLSPTNPYGCSSCSCDPRGTISGVAECQQG 859
Query: 122 KGQCESAQLSSRGRVHTELRVQSRK-------NFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
GQC + V +K F + + C+ D GG+L
Sbjct: 860 NGQC-----------FCKPNVCGQKCTSCKDGYFRLDQADYFGCKTCQCDI-----GGAL 903
Query: 175 NLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C G CQC+P G C++ +HY
Sbjct: 904 AQGCEPRMGTCQCRPNTQGPTCNKPAKDHY 933
>gi|390348828|ref|XP_003727092.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-2-like
[Strongylocentrotus purpuratus]
Length = 2688
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 108/236 (45%), Gaps = 36/236 (15%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
+ G CL C+ G +C++C +Y + C AC C+ GSL QC+ G CQC+
Sbjct: 904 YTGACLLCREGSVGDHCQRCALGFYGNAIQRTCQACQCHEAGSLYPQCDEVTGSCQCRSN 963
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
VTG +CD C H++ GC+SC+C+P GS+ + CD + GQC S +L GR+ +
Sbjct: 964 VTGRQCDTCLPGHFNLSTGGCQSCDCHPTGSLDDI--CDVMTGQC-SCKLGVSGRLCDQ- 1019
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE--------GRCQCKPGVTG 192
C + G G + +C G+C C V G
Sbjct: 1020 --------------------CMAGFWNFGENGCQSCECEQSGGLCDPLTGQCGCPANVIG 1059
Query: 193 DKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+CD C + + GCK C C+ GS + CD + GQC C + EG QC S
Sbjct: 1060 QRCDSCAPETWGYNSVFGCKPCNCSDVGS--SNRQCDLITGQCRCYKSYEGRQCNS 1113
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 29/225 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C+ C ++ S C +C+C+P GSL+ C+ G+C CK GV+G CD
Sbjct: 960 CRSNVTGRQCDTCLPGHFNLSTGG-CQSCDCHPTGSLDDICDVMTGQCSCKLGVSGRLCD 1018
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRK 146
+C ++FGE GC+SCEC +G + CD + GQC A + + R S
Sbjct: 1019 QCMAGFWNFGENGCQSCECEQSGGL-----CDPLTGQCGCPANVIGQ-------RCDSCA 1066
Query: 147 NFDPAGNRIWDLRRCK-RDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYD 204
N ++ + C D GS N QC+ G+C+C G +C+ C +Y
Sbjct: 1067 PETWGYNSVFGCKPCNCSDV------GSSNRQCDLITGQCRCYKSYEGRQCNSCGFGYY- 1119
Query: 205 FGEAGCKSCECNPAGSVKNT---PNCD-SVKGQCECKDNVEGAQC 245
G C+ C C+ G +T CD + +G C CK N++G +C
Sbjct: 1120 -GYPKCRKCRCSRRGRDPSTCRGDLCDCNEEGSCICKTNIQGKKC 1163
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 104/241 (43%), Gaps = 29/241 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC------NPIGSLNLQCNSEGRC 75
+ G C C + GP+CE C +Y + AC + S + C ++ R
Sbjct: 789 YMGECSQCDHNTYGPHCESCLPGFYGDATSGLADACQPCACPREDQGSSFSPTCIADDRY 848
Query: 76 -----QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTP--NCDSVKGQC 125
QC G G +CD+C Y D G C+ C N G++ + +CD+ G C
Sbjct: 849 GFVCNQCATGHGGPRCDKCVDGFYGDPMTTGLACRPCSLNCNGNLDTSSPGSCDTYTGAC 908
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC 184
L G V + + + A R +C GSL QC+ G C
Sbjct: 909 ---LLCREGSVGDHCQRCALGFYGNAIQRTCQACQCH-------EAGSLYPQCDEVTGSC 958
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
QC+ VTG +CD C H++ GC+SC+C+P GS+ + CD + GQC CK V G
Sbjct: 959 QCRSNVTGRQCDTCLPGHFNLSTGGCQSCDCHPTGSLDDI--CDVMTGQCSCKLGVSGRL 1016
Query: 245 C 245
C
Sbjct: 1017 C 1017
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 29/143 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G ++ C++D + ++ GG C+ C+ + DG NC+ CRD +Y+ G
Sbjct: 357 CNCHGHADDCYYDAKADAQSLSIDEDGNYNGGGVCVACRDNTDGLNCQTCRDGFYRPLGV 416
Query: 51 ----DNFCTACNCNPIGSL-----------NLQCN--SEGRCQCKPGVTGDKCDRCDVNH 93
+ C C C+ IG+ Q N + G C CK G G CDRC +
Sbjct: 417 EPTDPSPCRECRCSAIGTQPDSNNNCVKDERSQVNDMNPGDCFCKEGYAGPSCDRCARGY 476
Query: 94 YDFGEAGCKSCECNPAGSVKNTP 116
G C+ C C+ AGS P
Sbjct: 477 R--GYPDCEKCLCSNAGSSNEDP 497
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 82/204 (40%), Gaps = 42/204 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ G C++C ++ G+N C +C C G L C+ G+C C V G +CD
Sbjct: 1008 CKLGVSGRLCDQCMAGFW-NFGENGCQSCECEQSGGL---CDPLTGQCGCPANVIGQRCD 1063
Query: 88 RCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--------VHT 138
C + + GCK C C+ GS + CD + GQC + S GR +
Sbjct: 1064 SCAPETWGYNSVFGCKPCNCSDVGS--SNRQCDLITGQCRCYK-SYEGRQCNSCGFGYYG 1120
Query: 139 ELRVQ----SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
+ + SR+ DP+ C+ D CN EG C CK + G K
Sbjct: 1121 YPKCRKCRCSRRGRDPS--------TCRGDL----------CDCNEEGSCICKTNIQGKK 1162
Query: 195 CDRCDVNHYDFG---EAGCKSCEC 215
C +C + GC SC C
Sbjct: 1163 CSKCSKGSFSLQPKLPTGCTSCFC 1186
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G CDRC + G C+ C C+ AGS N D +G C CK NVE
Sbjct: 456 GDCFCKEGYAGPSCDRCARGYR--GYPDCEKCLCSNAGS----SNEDPCEGPCVCKPNVE 509
Query: 242 GAQC 245
G+ C
Sbjct: 510 GSNC 513
>gi|348545290|ref|XP_003460113.1| PREDICTED: laminin subunit beta-1-like [Oreochromis niloticus]
Length = 1818
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 118/266 (44%), Gaps = 82/266 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ +G+ GG C DC+ + G NCE+C+ YYQ N
Sbjct: 367 CNCNQHSDSCHFDAAVFAASGNVSGGVCDDCEHNTAGNNCEQCKPFYYQHPERDIRDANI 426
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA--GC 101
C C+C+P+G LN C+S G+C+CK V G++C+RC H+ + GC
Sbjct: 427 CQPCDCDPVGCLNGGLCDSTTDVRAGLIAGQCRCKANVEGERCERCKPAHFGLSDEPEGC 486
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
K+C C+P G++ P GN C
Sbjct: 487 KACTCSPLGTL-------------------------------------PGGNP------C 503
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPAG 219
R+T G C CK VTG CD+C H+ GC+ C+C+ G
Sbjct: 504 DRET----------------GSCFCKRLVTGRDCDQCVPEHWGLSNDMDGCRPCDCDLGG 547
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
++ N CD + GQC C+D++ G +C
Sbjct: 548 AINN--QCDHMTGQCVCRDHMFGRRC 571
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C+C+P GSL+ C+ G +C+C+P V G CDRC + + FG GC+ C C+P GS+ +
Sbjct: 802 CHCDPQGSLSTVCDPHGGQCECRPNVVGRNCDRCSPSTFQFGPNGCRVCGCDPQGSL--S 859
Query: 116 PNCDSVKGQC 125
CD + GQC
Sbjct: 860 VFCDQLTGQC 869
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 106/235 (45%), Gaps = 20/235 (8%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
HGG C +C+ + G NC++C + +Q G N C C C+P GSL++ C+ G+C C G
Sbjct: 817 HGGQC-ECRPNVVGRNCDRCSPSTFQ-FGPNGCRVCGCDPQGSLSVFCDQLTGQCSCVSG 874
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+CDRC H+ F C+ C CN V CD G+C + + GR
Sbjct: 875 AYSRQCDRCLPGHWAF--PTCRPCSCNGHADV-----CDPDSGRCIDCRDHTMGRACD-- 925
Query: 141 RVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHGGSLNLQCNSEG-RCQCKPGVTGDKCD 196
R DP R C P GS +S+ C C G G +CD
Sbjct: 926 RCLDGYYGDPTLGSGDHCRPCMCPDGPGSPRQFAGSCYRSDDSQQVTCVCNTGYKGTRCD 985
Query: 197 RCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCRS 247
C +Y + E G C+ C+CN + + +CD+ G+C C + EGA C+S
Sbjct: 986 ECSPGYYGNPEEVGGQCQPCQCNNNIDMLDPESCDARNGKCLRCLYHSEGAACQS 1040
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 114/271 (42%), Gaps = 49/271 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTA 56
C+CNG ++ C D G C+DC+ G C++C D YY SGD+ C
Sbjct: 896 CSCNGHADVCDPD---------SGRCIDCRDHTMGRACDRCLDGYYGDPTLGSGDH-CRP 945
Query: 57 CNC-NPIGSLNLQCNS--------EGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C C + GS S + C C G G +CD C +Y + E G C+ C
Sbjct: 946 CMCPDGPGSPRQFAGSCYRSDDSQQVTCVCNTGYKGTRCDECSPGYYGNPEEVGGQCQPC 1005
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW-DLRRCKR 163
+CN + + +CD+ G+C R H+E GN + D R+C
Sbjct: 1006 QCNNNIDMLDPESCDARNGKC------LRCLYHSEGAACQSCTLGYYGNALLQDCRKCVC 1059
Query: 164 DTYPLGHGGSLNLQC--------NSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCE 214
+ GS+ C S G+C C V G CDRC + ++ GC++C+
Sbjct: 1060 NRL-----GSVPSSCPSSECHCDRSSGQCHCLSNVVGQHCDRCAPDTWNMATGIGCQTCD 1114
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+P S + + C+ + GQC C G C
Sbjct: 1115 CDPKHSYRTS--CNEISGQCSCHTGFGGRTC 1143
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 76/185 (41%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC--------NSEGRC 75
G CL C +G C+ C YY + C C CN +GS+ C S G+C
Sbjct: 1024 GKCLRCLYHSEGAACQSCTLGYYGNALLQDCRKCVCNRLGSVPSSCPSSECHCDRSSGQC 1083
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C V G CDRC + ++ GC++C+C+P S + + C+ + GQC S G
Sbjct: 1084 HCLSNVVGQHCDRCAPDTWNMATGIGCQTCDCDPKHSYRTS--CNEISGQC-SCHTGFGG 1140
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGD 193
R +E + W K G QCN G C C GV+G
Sbjct: 1141 RTCSECK-----------ELFWGDPEIKCHACDCDPRGISEQQCNKVSGHCVCVEGVSGP 1189
Query: 194 KCDRC 198
+CD C
Sbjct: 1190 RCDTC 1194
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 35 GPNCEKCRDNYY---QKSGDNFCTACNCNP-IGSLNLQ-CNSE-GRC-QCKPGVTGDKCD 87
G C++C YY ++ G C C CN I L+ + C++ G+C +C G C
Sbjct: 981 GTRCDECSPGYYGNPEEVGGQ-CQPCQCNNNIDMLDPESCDARNGKCLRCLYHSEGAACQ 1039
Query: 88 RCDVNHY-DFGEAGCKSCECNPAGSVKNT-P----NCDSVKGQCESAQLSSRGRVHTELR 141
C + +Y + C+ C CN GSV ++ P +CD GQC LS+ H +
Sbjct: 1040 SCTLGYYGNALLQDCRKCVCNRLGSVPSSCPSSECHCDRSSGQCHC--LSNVVGQHCD-- 1095
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS-EGRCQCKPG 189
RC DT+ + G S CN G+C C G
Sbjct: 1096 ------------------RCAPDTWNMATGIGCQTCDCDPKHSYRTSCNEISGQCSCHTG 1137
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C C + E C +C+C+P G + C+ V G C C + V G +C
Sbjct: 1138 FGGRTCSECKELFWGDPEIKCHACDCDPRGISEQ--QCNKVSGHCVCVEGVSGPRC 1191
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 64/158 (40%), Gaps = 43/158 (27%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G K C C+P GS+ CD GQCE + + GR N D
Sbjct: 798 GAKECHCDPQGSLSTV--CDPHGGQCE-CRPNVVGR-----------NCD---------- 833
Query: 160 RCKRDTYPLGHG----------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC T+ G GSL++ C+ G+C C G +CDRC H+ F
Sbjct: 834 RCSPSTFQFGPNGCRVCGCDPQGSLSVFCDQLTGQCSCVSGAYSRQCDRCLPGHWAF--P 891
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
C+ C CN V CD G+C +C+D+ G C
Sbjct: 892 TCRPCSCNGHADV-----CDPDSGRCIDCRDHTMGRAC 924
>gi|391331013|ref|XP_003739945.1| PREDICTED: laminin subunit alpha-1 [Metaseiulus occidentalis]
Length = 3232
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 112/228 (49%), Gaps = 26/228 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G+C C G+ DG NC +C+ +Y C AC C+P+GS +QC+ G+C+C PG
Sbjct: 852 GYCNYCLGNTDGWNCSRCKKLFYGNPQIPDCKACECDPVGSSEMQCDPVTGQCKCHPGFG 911
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV--HTEL 140
G C CDV D + C C+CNP GS N+ CD G C + G H +
Sbjct: 912 GRTCKTCDVGFGDIAQK-CIECKCNPIGS--NSTVCDPYTGHC----ICKEGVFGQHCDQ 964
Query: 141 RVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
F +G CK D Y GS QC+ E G+C+C P V G +CD+C
Sbjct: 965 CKDLHYGFSTSG--------CKFCDCYA---PGSHEQQCDVETGQCKCYPHVIGRRCDKC 1013
Query: 199 DVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ ++ AGC+ C CN G+ + P+CD GQC CK V G +C
Sbjct: 1014 ESGFWNIQTGAGCEPCNCNSVGA--SGPSCDIRTGQCICKPGVGGKKC 1059
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 97/232 (41%), Gaps = 54/232 (23%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH 93
G C+KC ++ C CNCN +G+ C+ G+C CKPGV G KCD C NH
Sbjct: 1007 GRRCDKCESGFWNIQTGAGCEPCNCNSVGASGPSCDIRTGQCICKPGVGGKKCDVCLPNH 1066
Query: 94 YDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
FG GC CE C+ G V CD G C P
Sbjct: 1067 RKFGPQGCFKCEPCDAPGHV-----CDEETGSC----------------------ICPKN 1099
Query: 153 NRIWDLRRCKRDTYPL-----------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
D RCK + GSL++ C+ G+C+C+ G G KCD+C
Sbjct: 1100 TGGPDCSRCKEGYFGYIPQEGCRPCDCNSVGSLSVDCDGNGQCRCREGFEGVKCDKCTFG 1159
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPN--------CDSVKGQCECKDNVEGAQC 245
HY F C+ CECN G+ P CD G C CK+NVEG +C
Sbjct: 1160 HYGFPH--CRRCECNLEGT---KPEQCRNGICGCDD-DGYCHCKENVEGTKC 1205
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 25/228 (10%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
+ GHC+ C+ G +C++C+D +Y S C C+C GS QC+ E G+C+C P
Sbjct: 947 YTGHCI-CKEGVFGQHCDQCKDLHYGFSTSG-CKFCDCYAPGSHEQQCDVETGQCKCYPH 1004
Query: 81 VTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G +CD+C+ ++ AGC+ C CN G+ + P+CD GQC G +
Sbjct: 1005 VIGRRCDKCESGFWNIQTGAGCEPCNCNSVGA--SGPSCDIRTGQCICK--PGVGGKKCD 1060
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
+ + + + F P G +C+ P GH C+ E G C C G C RC
Sbjct: 1061 VCLPNHRKFGPQG-----CFKCEPCDAP-GH------VCDEETGSCICPKNTGGPDCSRC 1108
Query: 199 DVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ + + GC+ C+CN GS+ + +CD GQC C++ EG +C
Sbjct: 1109 KEGYFGYIPQEGCRPCDCNSVGSL--SVDCDG-NGQCRCREGFEGVKC 1153
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C + GP+C +C++ Y+ C C+CN +GSL++ C+ G+C+C+ G G
Sbjct: 1092 GSCI-CPKNTGGPDCSRCKEGYFGYIPQEGCRPCDCNSVGSLSVDCDGNGQCRCREGFEG 1150
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGS 111
KCD+C HY F C+ CECN G+
Sbjct: 1151 VKCDKCTFGHYGFPH--CRRCECNLEGT 1176
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPG--- 80
C++C+ G +CE+C + Y+ C C C P N+ + +G C + G
Sbjct: 800 CINCKPGYTGKHCERCSEGYFGNPTVPGGKCIPCQCGP----NVDKSRKGWCDHRTGYCN 855
Query: 81 -----VTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
G C RC Y + CK+CEC+P GS + CD V GQC
Sbjct: 856 YCLGNTDGWNCSRCKKLFYGNPQIPDCKACECDPVGSSEM--QCDPVTGQC--------- 904
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
+ H ++ K D I ++C P+G ++ C+ G C CK GV G
Sbjct: 905 KCHPGFGGRTCKTCDVGFGDI--AQKCIECKCNPIGSNSTV---CDPYTGHCICKEGVFG 959
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD+C HY F +GCK C+C GS + CD GQC+C +V G +C
Sbjct: 960 QHCDQCKDLHYGFSTSGCKFCDCYAPGS--HEQQCDVETGQCKCYPHVIGRRC 1010
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 103/274 (37%), Gaps = 65/274 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG---DNFCTAC 57
C CN +RC + C C + G CEKC+ +Y + ++ C C
Sbjct: 725 CPCNNHVDRC---------DPYTAQCGPCLHNTMGTFCEKCKFGFYGDATIGKEDDCKPC 775
Query: 58 NCN-PIGSLNLQ--CNSEGRCQ-----CKPGVTGDKCDRCDVNHY---DFGEAGCKSCEC 106
C I S N C S + CKPG TG C+RC ++ C C+C
Sbjct: 776 ACPLTIPSNNFADGCKSVSETEYECINCKPGYTGKHCERCSEGYFGNPTVPGGKCIPCQC 835
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P CD G C ++ G W+ RCK+ Y
Sbjct: 836 GPNVDKSRKGWCDHRTGYCNYCLGNTDG---------------------WNCSRCKKLFY 874
Query: 167 --------------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
P+ GS +QC+ G+C+C PG G C CDV D + C
Sbjct: 875 GNPQIPDCKACECDPV---GSSEMQCDPVTGQCKCHPGFGGRTCKTCDVGFGDIAQK-CI 930
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+CNP GS N+ CD G C CK+ V G C
Sbjct: 931 ECKCNPIGS--NSTVCDPYTGHCICKEGVFGQHC 962
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNP 61
N FS+ C + E + + C +CQ G CE C D YY + C ACNCNP
Sbjct: 1542 NSFSDTCEYRGEDFRQYV----CTNCQKGYTGLRCEICADGYYGDPNVVNGTCKACNCNP 1597
Query: 62 IGSLNLQC--NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
G++ G+C C PG++G C C H F E GCKSC+ G++ N
Sbjct: 1598 YGTIQGGVCDKKNGQCPCIPGISGRDCTVCPRRHV-FTEFGCKSCDDTCTGALLN 1651
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 19/137 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG---DNFCTAC 57
C CNG + C FD++ C+ C G+ G CEKC+ +Y+ + + C C
Sbjct: 319 CECNGHATECRFDEQA------DSVCVHCTGNTAGQFCEKCKPGFYRTANMLPHDDCIPC 372
Query: 58 NCNPIGSL-------NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
C G+ + G C C G TG C C++ + G + C C C+P G
Sbjct: 373 KCGKDGASGDCVPDNSFDRREPGECICATGYTGKDCTECEIGYRKSG-SSCIECSCDPRG 431
Query: 111 SVKNTPNCDSVKGQCES 127
+ N +CD+ +C+S
Sbjct: 432 AAVN--DCDADDCRCKS 446
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 28/140 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTA 56
C CNG ++ C DKE G C +C+ + G +CEKC +Y GD C
Sbjct: 1487 CECNGMASEC--DKE-------TGVCFNCRDNTVGDHCEKCAPGFY---GDPVRGIACNP 1534
Query: 57 CNC-NPIGSLNLQCNSEGR-------CQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCE 105
C C P S + C G C+ G TG +C+ C +Y + CK+C
Sbjct: 1535 CACPRPDNSFSDTCEYRGEDFRQYVCTNCQKGYTGLRCEICADGYYGDPNVVNGTCKACN 1594
Query: 106 CNPAGSVKNTPNCDSVKGQC 125
CNP G+++ CD GQC
Sbjct: 1595 CNPYGTIQGG-VCDKKNGQC 1613
>gi|338728071|ref|XP_001494653.3| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-3 [Equus
caballus]
Length = 3279
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 124/268 (46%), Gaps = 36/268 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D ++ + GG C++CQ + G NCEKC Y++ G
Sbjct: 323 CNCHGHAIDCYYDPDVERQQASLNIQGIYAGGGVCINCQHNTAGVNCEKCAKGYFRPYGI 382
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+CNP + + + S GRC CKP GD C++C +++F C
Sbjct: 383 PLDAPDGCIPCSCNPEHAEDCEQGS-GRCTCKPNFQGDHCEKCAAGYHNF-----PFCLR 436
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA--GNRIWDLRRCKRD 164
P + D V G+ + + G + Q R P G R D R
Sbjct: 437 IPIFPISTPSPEDPVAGEIKGCDCNLEGVLPEICDAQGRCLCRPGVEGPRC-DACRSGFY 495
Query: 165 TYPL------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
++P+ GS CN E G+C+C+PG+TG +CDRC YDF S C+P
Sbjct: 496 SFPICQACQCSALGSYQTPCNPETGQCECRPGITGQRCDRCLSGAYDFPHCQGSSSACDP 555
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AG++ DS +G C+CK +VEG C
Sbjct: 556 AGTL------DSSRGYCQCKPHVEGPTC 577
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 109/232 (46%), Gaps = 32/232 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS CN E G+C+C+PG+T
Sbjct: 474 GRCL-CRPGVEGPRCDACRSGFYSFP---ICQACQCSALGSYQTPCNPETGQCECRPGIT 529
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ ++ K E S ++ L
Sbjct: 530 GQRCDRCLSGAYDFPHCQGSSSACDPAGTLDSSRGYCQCKPHVEGPTCSICKPLYWNLAT 589
Query: 143 QSRKNFDP----AGNRIWDLRRC-KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
++ AG + + C +RD G C CK V+GD CD
Sbjct: 590 ENPNGCSECQCHAGGTVSGIGECGQRD-----------------GDCHCKSHVSGDSCDT 632
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C+ ++ ++ GC+ C+C+ G++ +P C G C+C+ ++ G C+
Sbjct: 633 CEDGYFALEKSSYFGCQGCQCDIGGAI--SPICSGPGGVCQCRAHIVGKACQ 682
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 85/210 (40%), Gaps = 51/210 (24%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GS+ C+ EG +C C+P + G +C RC +Y F CK C C
Sbjct: 1231 NGALPCECHPTGSIGHHCSPEGGQCPCRPNIIGRQCTRCRTGYYGFPH--CKPCSCGQHL 1288
Query: 111 SVKNTPNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-----------GNRI 155
+ T C +V+ QCE + S +F P G
Sbjct: 1289 CEEMTGKCLCPPRTVRPQCEVCETHSF-------------SFHPLAGCKGCNCSRRGTLE 1335
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
C RD G+C+CKP +TG +CDRC Y F E C C C
Sbjct: 1336 AATPECDRD----------------HGQCRCKPRITGRQCDRCASGFYHFPE--CIPCHC 1377
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N G+ CD G C CK+NVEG +C
Sbjct: 1378 NRDGTEPAV--CDPGTGACLCKENVEGTEC 1405
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ G+L G+C+CKP +TG +CDRC
Sbjct: 1305 PQCEVCETHSFSFHPLAGCKGCNCSRRGTLEAATPECDRDHGQCRCKPRITGRQCDRCAS 1364
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1365 GFYHFPE--CIPCHCNRDGTEPAV--CDPGTGAC 1394
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 82/204 (40%), Gaps = 38/204 (18%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ + G C +CR YY G C C+C +L G+C C P
Sbjct: 1252 GGQC-PCRPNIIGRQCTRCRTGYY---GFPHCKPCSCGQ----HLCEEMTGKCLCPPRTV 1303
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN-TPNCDSVKGQCESAQLSSRGRVHTEL 140
+C+ C+ + + F AGCK C C+ G+++ TP CD GQC
Sbjct: 1304 RPQCEVCETHSFSFHPLAGCKGCNCSRRGTLEAATPECDRDHGQCRCKP----------- 1352
Query: 141 RVQSRKNFDPAGNRIWDLRRC-----KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDK 194
R+ R+ D + + C RD G+ C+ G C CK V G +
Sbjct: 1353 RITGRQC-DRCASGFYHFPECIPCHCNRD-------GTEPAVCDPGTGACLCKENVEGTE 1404
Query: 195 CDRCDVNHYDFGEA---GCKSCEC 215
C+ C + A GC SC C
Sbjct: 1405 CNVCREGSFYLDPANPKGCTSCFC 1428
>gi|431900774|gb|ELK08215.1| Multiple epidermal growth factor-like domains 9, partial [Pteropus
alecto]
Length = 555
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 14/222 (6%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G +CE C++ +Y C C C+P G+L++ CNS G+CQCK GVTG CD
Sbjct: 178 ECQPGFQGLHCETCKEGFYLNHTSGLCLPCECSPHGALSILCNSSGKCQCKVGVTGSTCD 237
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C +Y F ++GC C CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 238 QCQDGYYHFSKSGCLPCRCN-----NRSASCDALTGACLNCQENSKGD-HCE---ECKEG 288
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFG 206
F + + RC G + SE +C QCK G TG C++C ++Y++
Sbjct: 289 FYQSPGATKECLRCPCSAV-TSTGSCIIKLGESEPKCVQCKDGYTGQNCNKCANSYYNY- 346
Query: 207 EAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C C+C+ S+K C G+C C N G C
Sbjct: 347 DSICIKCQCHGHVDSIKTPKICKPESGECINCLHNTTGFWCE 388
>gi|355748913|gb|EHH53396.1| hypothetical protein EGM_14030 [Macaca fascicularis]
Length = 3112
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 114/267 (42%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C G C +C+ + G C+KC+ + C CNC
Sbjct: 916 CNANGSFSEICH---------SQTGQC-ECRANVQGQRCDKCKPGTFGLQSARGCVPCNC 965
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC ++ F E GC +CEC+ G+ NCD
Sbjct: 966 NSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFSFQEGGCTACECSHLGN-----NCD 1020
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
GQC P +C +T+ GH
Sbjct: 1021 PKTGQC----------------------ICPPNTIGEKCSKCAPNTW--GHSITTGCKAC 1056
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G+C C P +G KC C H+++ C C+C G+ T
Sbjct: 1057 NCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYPR--CNLCDCFLPGTDATTC 1114
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
+ ++ K GQC CK NVEG C
Sbjct: 1115 DSETKKCSCSDQTGQCTCKVNVEGIHC 1141
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 812 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 865
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 866 ----NLDFSIAGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDARNCQPCRCNAN 919
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 920 GSFSEI--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKPGTFGLQ 955
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC ++ F E GC +CEC+
Sbjct: 956 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFSFQEGGCTACECSHL 1015
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD GQC C N G +C
Sbjct: 1016 GN-----NCDPKTGQCICPPNTIGEKC 1037
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R+ GG C++C + G NCE C D +++ G
Sbjct: 340 CNCHGKAEECYYDENVARRSLSLNIHGKYIGGGVCINCTQNTAGINCETCIDGFFRPKGV 399
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+CNPIGSLN C + G C CK G G CDRC +
Sbjct: 400 SPNYPRPCQPCHCNPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 457
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 458 GYPDCKACNCSGLGSKNEDP 477
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 109/249 (43%), Gaps = 50/249 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G CL+C+ DGP C+KC +Y +NF C+ + SL
Sbjct: 767 GECLNCKDHTDGPYCDKCLPGFYGDPTKGTSEDCQPCACPLNIPSNNFSPTCHLD--RSL 824
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDS 120
L C+ C G TG +C+RC + FG+ C+ C+CN +CDS
Sbjct: 825 GLICDG-----CPVGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIAGSCDS 877
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP--LGHGGSLNLQC 178
+ G C + + GR + EL G+ + D R C+ P GS + C
Sbjct: 878 LSGSCLICKPGTTGR-YCELCADGY-----FGDAV-DARNCQ----PCRCNANGSFSEIC 926
Query: 179 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+S+ G+C+C+ V G +CD+C + A GC C CN GS + +C+ GQC C
Sbjct: 927 HSQTGQCECRANVQGQRCDKCKPGTFGLQSARGCVPCNCNSFGS--KSFDCEE-SGQCWC 983
Query: 237 KDNVEGAQC 245
+ V G +C
Sbjct: 984 QPGVTGKKC 992
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 79/225 (35%), Gaps = 64/225 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1024 GQCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1082
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C H+++ C C+C G+ T CDS +C
Sbjct: 1083 GAKCTECSRGHWNYPR--CNLCDCFLPGTDATT--CDSETKKCS---------------- 1122
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C T G+C CK V G CDRC
Sbjct: 1123 ------------------CSDQT----------------GQCTCKVNVEGIHCDRCQPGK 1148
Query: 203 YDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+ GC SC C T C KG ++ Q
Sbjct: 1149 FGLDAKNPLGCSSCYC-----FGTTTQCSEAKGLIRTWVTLKAEQ 1188
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1490 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGICTCRPGAT 1549
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1550 GRKCDGCKHWH 1560
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1416 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1466
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C +EG RC C G G C+RC + + C+ CEC+
Sbjct: 1467 CPLISSSNNFSPSCVTEGLDDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1526
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1527 PYGSLPVP--CDPVTGIC 1542
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 434 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCNCKEN 487
Query: 240 VEGAQC 245
VEG C
Sbjct: 488 VEGGDC 493
>gi|355562072|gb|EHH18704.1| hypothetical protein EGK_15361 [Macaca mulatta]
Length = 3123
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 114/267 (42%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C G C +C+ + G C+KC+ + C CNC
Sbjct: 920 CNANGSFSEICH---------SQTGQC-ECRANVQGQRCDKCKPGTFGLQSARGCVPCNC 969
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC ++ F E GC +CEC+ G+ NCD
Sbjct: 970 NSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFSFQEGGCTACECSHLGN-----NCD 1024
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
GQC P +C +T+ GH
Sbjct: 1025 PKTGQC----------------------ICPPNTIGEKCSKCAPNTW--GHSITTGCKAC 1060
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G+C C P +G KC C H+++ C C+C G+ T
Sbjct: 1061 NCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYPR--CNLCDCFLPGTDATTC 1118
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
+ ++ K GQC CK NVEG C
Sbjct: 1119 DSETKKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDARNCQPCRCNAN 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEI--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKPGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC ++ F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFSFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD GQC C N G +C
Sbjct: 1020 GN-----NCDPKTGQCICPPNTIGEKC 1041
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R+ GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRSLSLNIHGKYIGGGVCINCTQNTAGINCETCIDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+CNPIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCNPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 109/249 (43%), Gaps = 50/249 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G CL+C+ DGP C+KC +Y +NF C+ + SL
Sbjct: 771 GECLNCKDHTDGPYCDKCLPGFYGDPTKGTSEDCQPCACPLNIPSNNFSPTCHLD--RSL 828
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDS 120
L C+ C G TG +C+RC + FG+ C+ C+CN +CDS
Sbjct: 829 GLICDG-----CPVGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIPGSCDS 881
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP--LGHGGSLNLQC 178
+ G C + + GR + EL G+ + D R C+ P GS + C
Sbjct: 882 LSGSCLICKPGTTGR-YCELCADGY-----FGDAV-DARNCQ----PCRCNANGSFSEIC 930
Query: 179 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+S+ G+C+C+ V G +CD+C + A GC C CN GS + +C+ GQC C
Sbjct: 931 HSQTGQCECRANVQGQRCDKCKPGTFGLQSARGCVPCNCNSFGS--KSFDCEE-SGQCWC 987
Query: 237 KDNVEGAQC 245
+ V G +C
Sbjct: 988 QPGVTGKKC 996
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 79/225 (35%), Gaps = 64/225 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GQCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C H+++ C C+C G+ T CDS +C
Sbjct: 1087 GAKCTECSRGHWNYPR--CNLCDCFLPGTDATT--CDSETKKCS---------------- 1126
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C T G+C CK V G CDRC
Sbjct: 1127 ------------------CSDQT----------------GQCTCKVNVEGIHCDRCQPGK 1152
Query: 203 YDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+ GC SC C T C KG ++ Q
Sbjct: 1153 FGLDAKNPLGCSSCYC-----FGTTTQCSEAKGLIRTWVTLKAEQ 1192
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGICTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C +EG RC C G G C+RC + + C+ CEC+
Sbjct: 1471 CPLISSSNNFSPSCVTEGLDDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ P CD V G C
Sbjct: 1531 PYGSLP-VP-CDPVTGIC 1546
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCNCKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|297291764|ref|XP_001105600.2| PREDICTED: laminin subunit alpha-2-like [Macaca mulatta]
Length = 3096
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 114/267 (42%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C G C +C+ + G C+KC+ + C CNC
Sbjct: 920 CNANGSFSEICH---------SQTGQC-ECRANVQGQRCDKCKPGTFGLQSARGCVPCNC 969
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC ++ F E GC +CEC+ G+ NCD
Sbjct: 970 NSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFSFQEGGCTACECSHLGN-----NCD 1024
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
GQC P +C +T+ GH
Sbjct: 1025 PKTGQC----------------------ICPPNTIGEKCSKCAPNTW--GHSITTGCKAC 1060
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G+C C P +G KC C H+++ C C+C G+ T
Sbjct: 1061 NCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYPR--CNLCDCFLPGTDATTC 1118
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
+ ++ K GQC CK NVEG C
Sbjct: 1119 DSETKKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDARNCQPCRCNAN 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEI--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKPGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC ++ F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFSFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD GQC C N G +C
Sbjct: 1020 GN-----NCDPKTGQCICPPNTIGEKC 1041
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R+ GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRSLSLNIHGKYIGGGVCINCTQNTAGINCETCIDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+CNPIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCNPIGSLNEVCVKDEKHAQRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 109/249 (43%), Gaps = 50/249 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G CL+C+ DGP C+KC +Y +NF C+ + SL
Sbjct: 771 GECLNCKDHTDGPYCDKCLPGFYGDPTKGTSEDCQPCACPLNIPSNNFSPTCHLD--RSL 828
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDS 120
L C+ C G TG +C+RC + FG+ C+ C+CN +CDS
Sbjct: 829 GLICDG-----CPVGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIPGSCDS 881
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP--LGHGGSLNLQC 178
+ G C + + GR + EL G+ + D R C+ P GS + C
Sbjct: 882 LSGSCLICKPGTTGR-YCELCADGY-----FGDAV-DARNCQ----PCRCNANGSFSEIC 930
Query: 179 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+S+ G+C+C+ V G +CD+C + A GC C CN GS + +C+ GQC C
Sbjct: 931 HSQTGQCECRANVQGQRCDKCKPGTFGLQSARGCVPCNCNSFGS--KSFDCEE-SGQCWC 987
Query: 237 KDNVEGAQC 245
+ V G +C
Sbjct: 988 QPGVTGKKC 996
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 79/225 (35%), Gaps = 64/225 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GQCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C H+++ C C+C G+ T CDS +C
Sbjct: 1087 GAKCTECSRGHWNYPR--CNLCDCFLPGTDATT--CDSETKKCS---------------- 1126
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C T G+C CK V G CDRC
Sbjct: 1127 ------------------CSDQT----------------GQCTCKVNVEGIHCDRCQPGK 1152
Query: 203 YDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+ GC SC C T C KG ++ Q
Sbjct: 1153 FGLDAKNPLGCSSCYC-----FGTTTQCSEAKGLIRTWVTLKAEQ 1192
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGICTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C +EG RC C G G C+RC + + C+ CEC+
Sbjct: 1471 CPLISSSNNFSPSCVTEGLDDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1531 PYGSLPVP--CDPVTGIC 1546
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCNCKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|74151107|dbj|BAE27677.1| unnamed protein product [Mus musculus]
Length = 135
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 68/101 (67%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG G CL+C + G +CE+CR+ +Y+ + C CNC+
Sbjct: 28 CDCNGKSRQCVFDQELHRQTGSGFRCLNCNDNTAGVHCERCREGFYRHRDRDRCLPCNCH 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 101
GSL+ C++ G+C+CKPGVTG +CDRC + +AGC
Sbjct: 88 SKGSLSAGCDNSGQCRCKPGVTGQRCDRCQPGFHMLTDAGC 128
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
GSL+ C++ G+C+CKPGVTG +CDRC + +AGC
Sbjct: 90 GSLSAGCDNSGQCRCKPGVTGQRCDRCQPGFHMLTDAGC 128
>gi|426333776|ref|XP_004028446.1| PREDICTED: usherin-like [Gorilla gorilla gorilla]
Length = 1548
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CN S C ++ + + G GG C DC+ + G NCE C+D ++++ G
Sbjct: 575 CQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGIDPSA 634
Query: 51 DNFCTACNCNPIGSLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C C+C +G+ N + C+ G+C CK V+G +C++C Y+ E GC C
Sbjct: 635 IDVCKPCDCEKVGTRNGSILCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPC 694
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + H + ++F+ G C+
Sbjct: 695 NCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDHCNFGFKFLRSFNDDG-----CEPCQC 749
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS+N CN G+C+CK G +CD C N Y CK+C+C+ AGS+
Sbjct: 750 NLH-----GSVNKFCNPHSGQCECKKEAKGLQCDTCRENFYGLDVTNCKACDCDTAGSLP 804
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T C++ GQC CK NVEG QC
Sbjct: 805 GT-VCNAKTGQCICKPNVEGRQC 826
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + N+Y + ++F C CNC+ G++N L C+ S G+C CK
Sbjct: 813 GQCI-CKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCDKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASIAGQRCDQCRDHYFGFNPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 111/233 (47%), Gaps = 34/233 (14%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ + G C+ C + + D+ C C CN GS+N CN G+C+CK G +
Sbjct: 717 CKANVIGLRCDHCNFGFKFLRSFNDDGCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y CK+C+C+ AGS+ T C++ GQC + V+ R
Sbjct: 777 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQCIC-----------KPNVEGR 824
Query: 146 K-------NFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKC 195
+ NF N + C D G++N L C+ S G+C CK GVTG +C
Sbjct: 825 QCNKCLEGNFYLRQNNSFLCLPCNCD-----KTGTINGSLLCDKSTGQCPCKLGVTGLRC 879
Query: 196 DRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C+ + Y+ C+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 880 NQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 931
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ G+V + C+S+ GQC S G+ + R
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHI--CNSLTGQCVCQDASIAGQRCDQCR- 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
F+P R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DHYFGFNPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++CRD+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCVCQDASIAGQRCDQCRDHYFGFNPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1026 FVTGSKCDACVPSASHLD 1043
>gi|296190687|ref|XP_002806564.1| PREDICTED: LOW QUALITY PROTEIN: multiple epidermal growth
factor-like domains protein 9 [Callithrix jacchus]
Length = 609
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 115/223 (51%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 232 ECQPGYQGLHCETCKEGFYPDYTSGLCQPCDCSPHGALSILCNSSGKCQCKVGVIGSTCD 291
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 292 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEG 342
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ N SE C QCK G G C+ C+ +Y+F
Sbjct: 343 FYQSPDATKECLRCPCSA--VTSTGSCSIKSNESEPECDQCKDGYIGPNCNTCENGYYNF 400
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 401 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 442
>gi|335308944|ref|XP_003361431.1| PREDICTED: laminin subunit alpha-1, partial [Sus scrofa]
Length = 1533
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 112/228 (49%), Gaps = 30/228 (13%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C Y++ C CNCN GSL+ C+ EG+C C PGV G++CD
Sbjct: 842 DCKPHVTGQQCDQCLHGYFRLDSGFGCLPCNCNASGSLSDDCSEEGQCPCVPGVAGERCD 901
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y + + GC C+C +NT CD G+C HT+ +
Sbjct: 902 RCARGFYAYQDGGCTPCDC---AHTQNT--CDPDSGECVCPP-------HTQ-GTACEEC 948
Query: 148 FDPAGNRIWDL--RRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYD 204
D +L + C + GS++ QC+ GRCQCKPG G C +C + + D
Sbjct: 949 VDGHWGHDLELGCQACNCSSV-----GSISHQCDVLTGRCQCKPGFGGRTCAQCSLGYRD 1003
Query: 205 FGEAGCKSCECNPAGSVKNT--P-----NCDSVKGQCECKDNVEGAQC 245
F + C +C+CN G++ +T P +C S G C CK+NV G QC
Sbjct: 1004 FPD--CVACDCNLRGTLADTCDPEQGLCSCASEMGTCSCKENVVGPQC 1049
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + N+ GG C+DC + G NCE C D YY+ G
Sbjct: 306 CNCHNKAKDCYYDENVANQKRSLNTAGQFQGGGVCIDCLQNTMGINCETCIDGYYRPHGV 365
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
DN C C+C+P+GSL+ C + G+C C+ G G+KCDRC +
Sbjct: 366 SPSEDNPCHPCDCDPLGSLSSVCIKDDHHSDLHGGKWPGQCPCREGYAGEKCDRCQFGYK 425
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
G C C+CNPAGS+ P
Sbjct: 426 --GYPSCVPCDCNPAGSMNEEP 445
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 100/237 (42%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +Y GD C+AC C+ GSL+ C+ E G C CK
Sbjct: 788 GECLKCIGNTDGXXXXXXXHGFY---GDAVTAKNCSACECHEQGSLSAVCHPETGLCDCK 844
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C ++ GC C CN +GS+ + +C S +GQC
Sbjct: 845 PHVTGQQCDQCLHGYFRLDSGFGCLPCNCNASGSLSD--DC-SEEGQCPCVP-------- 893
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS--------EGRCQCKPG 189
AG R RC R Y GG C G C C P
Sbjct: 894 -----------GVAGERC---DRCARGFYAYQDGGCTPCDCAHTQNTCDPDSGECVCPPH 939
Query: 190 VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C H+ E GC++C C+ GS+ + CD + G+C+CK G C
Sbjct: 940 TQGTACEECVDGHWGHDLELGCQACNCSSVGSISH--QCDVLTGRCQCKPGFGGRTC 994
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C G CE+C D ++ + C ACNC+ +GS++ QC+ GRCQCKPG
Sbjct: 932 GECV-CPPHTQGTACEECVDGHWGHDLELGCQACNCSSVGSISHQCDVLTGRCQCKPGFG 990
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
G C +C + + DF + C +C+CN G++ +T CD +G C A
Sbjct: 991 GRTCAQCSLGYRDFPD--CVACDCNLRGTLADT--CDPEQGLCSCA 1032
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 97/239 (40%), Gaps = 30/239 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSL--------NLQCNSE 72
G C CQ + G +CE+C + + C C C P+ + +L E
Sbjct: 675 GVCFACQHNTTGDHCEQCLPGFNGRPSQGTPRDCQPCAC-PLSTASNNFSPTCHLDEGDE 733
Query: 73 GRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C QC PG GD C+RC +Y C C CN +CDSV G+C
Sbjct: 734 VVCDQCAPGYAGDWCERCADGYYGNPTVPGDSCLPCNCNGNIDPLEAGSCDSVTGEC--- 790
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCK 187
L G F + C+ GSL+ C+ E G C CK
Sbjct: 791 -LKCIGNTDGXXXXXXXHGFYGDAVTAKNCSACE-----CHEQGSLSAVCHPETGLCDCK 844
Query: 188 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P VTG +CD+C ++ GC C CN +GS+ + +C S +GQC C V G +C
Sbjct: 845 PHVTGQQCDQCLHGYFRLDSGFGCLPCNCNASGSLSD--DC-SEEGQCPCVPGVAGERC 900
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ G G+KCDRC + G C C+CNPAGS+ P ++ C CK+NVE
Sbjct: 404 GQCPCREGYAGEKCDRCQFGYK--GYPSCVPCDCNPAGSMNEEPCSEA----CLCKENVE 457
Query: 242 GAQC 245
G C
Sbjct: 458 GKHC 461
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
C C +G CE+C Y+ C C+C+P GS++ C+ E G+C C+PG T
Sbjct: 1397 CDACFPGYEGRYCERCSPGYHGNPLRPGGTCQRCDCSPHGSVHSDCDRESGQCVCRPGAT 1456
Query: 83 GDKCDRCDVNHYDFGEAGCKSCE 105
G +C+ C+ H E C SC+
Sbjct: 1457 GLRCEACEPRHILL-EGDCMSCD 1478
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 33 RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 92
R+G EKC + G C C+CNP GS+N + SE C CK V G CDRC
Sbjct: 409 REGYAGEKCDRCQFGYKGYPSCVPCDCNPAGSMNEEPCSEA-CLCKENVEGKHCDRCKPG 467
Query: 93 HYDFGE---AGCKSCEC 106
Y+ + GC C C
Sbjct: 468 FYNLDQRNPQGCSECFC 484
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 165 TYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY--DFGEAG-CKSCECNPAGS 220
+ P + L+ + + RC C PG G C+RC ++ G C+ C+C+P GS
Sbjct: 1378 SLPASFSPTCVLEGDGDFRCDACFPGYEGRYCERCSPGYHGNPLRPGGTCQRCDCSPHGS 1437
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQCRS 247
V + +CD GQC C+ G +C +
Sbjct: 1438 VHS--DCDRESGQCVCRPGATGLRCEA 1462
>gi|334312318|ref|XP_001376890.2| PREDICTED: laminin subunit alpha-5 [Monodelphis domestica]
Length = 3734
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 109/227 (48%), Gaps = 28/227 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ + DG +C+ CR Y+ C C+C+P GSL+ C+ G C C+PG G
Sbjct: 615 GRCL-CRPEFDGLHCDSCRVGYHSYP---HCQVCSCDPRGSLDQFCSGAGMCHCRPGYAG 670
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C C +Y F C SC C+ AGS T C GQC S R RV
Sbjct: 671 SMCQECAPGYYGF--PNCMSCHCSEAGSFHAT--CHPETGQC-----SCRPRV------- 714
Query: 144 SRKNFDPAGNRIWDLRRCKRDT-YPLGHG-GSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
S + D + RC+ + P G G+ +L S+G C+C+ V G KCDRC
Sbjct: 715 SGVHCDTCVPGTYGFPRCEVGSCDPAGQASGNSSL---SQGSCECRAHVEGPKCDRCKPL 771
Query: 202 HYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+++ A GC+SC C+P G++ C GQC CK NV G C
Sbjct: 772 YWNLSPANPFGCRSCSCDPRGTINGVAECQQGNGQCFCKPNVCGQMC 818
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 103/260 (39%), Gaps = 61/260 (23%)
Query: 1 CNCNGFSNRCFFDKELY---------NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D E+ N GG C+DCQ G NCE+C YY +S D
Sbjct: 370 CNCHGHAHDCYYDPEVDRHRASKNQDNIYEGGGVCIDCQHHTTGINCERCIPGYY-RSPD 428
Query: 52 N------FCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C CNC + + GRC CKP TG+ CD C DF C
Sbjct: 429 HPIDSPYVCYRCNCESEFTDGTCEDLTGRCYCKPNYTGELCDACAKGFTDF-----PHCY 483
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
P+ S +T GQ + S+ G + GN C++D
Sbjct: 484 PVPSFSHNDTGAQVLPAGQIVNCDCSAAGTL---------------GN------ACRKDP 522
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G+C CKP G C++C H+ GC C C+ G +T
Sbjct: 523 --------------QVGQCVCKPNFQGVHCEQCAPGHHG---PGCLPCRCSGPGQKGDT- 564
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD GQC C+ EG C
Sbjct: 565 -CDDETGQCVCRTGFEGPAC 583
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL C + GP+CE C YY + CT C+C+P G+ S GRC CK GVT
Sbjct: 1996 GACLGCMYNTAGPHCESCAPGYYGNALLPGNCTKCDCSPCGTEACDARS-GRCLCKAGVT 2054
Query: 83 GDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +CDRC +Y F G GC+ C C PA P+C GQC
Sbjct: 2055 GPRCDRCQDGYYGFDGCGGCQPCNCGPAAM---GPSCHPQSGQC 2095
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 29/226 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ G C++C YY G C +C+C+ GS + C+ E G+C C+P V+G CD
Sbjct: 664 CRPGYAGSMCQECAPGYY---GFPNCMSCHCSEAGSFHATCHPETGQCSCRPRVSGVHCD 720
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR-- 145
C Y F C+ C+PAG N +G CE R H E R
Sbjct: 721 TCVPGTYGFPR--CEVGSCDPAGQASG--NSSLSQGSCEC-------RAHVEGPKCDRCK 769
Query: 146 ---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
N PA + R C D +G + Q N G+C CKP V G C C +
Sbjct: 770 PLYWNLSPANP--FGCRSCSCDPRGTINGVAECQQGN--GQCFCKPNVCGQMCTVCKDGY 825
Query: 203 YDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ +A GC++C+C+ G++ C+ G C+C+ N +G C
Sbjct: 826 FRLDQADYFGCQTCQCDIGGALAQ--GCEPRTGACQCRPNTQGPTC 869
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G+ + C G +C C+ V G C RC ++ F C+ C+C
Sbjct: 1441 NNGAQPCYCHEVGATSPTCEPFGGQCSCRAHVIGRDCSRCATGYWGF--PNCRPCDCG-- 1496
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--- 166
T CD V GQC P + D C+ T+
Sbjct: 1497 -----TRLCDEVTGQC----------------------ICPPRTILPDCVVCQDQTFGCH 1529
Query: 167 PL--------GHGGSLNLQ---CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
PL G L C+ + G+C+CKP + G +CD C Y G C+ C+
Sbjct: 1530 PLIGCEDCNCSRPGVEELTDPGCDLDSGQCKCKPNIIGRRCDACAPGFY--GYPNCRRCQ 1587
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C AG+V CD + GQC CKDNVEG +C
Sbjct: 1588 CFEAGTVAGV--CDPITGQCHCKDNVEGLRC 1616
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ +GP C++C Y+ C C C+P+G+L C+ GRC C+P G
Sbjct: 570 GQCV-CRTGFEGPACDRCAPGYFSYP---LCQLCGCSPVGTLPEGCDESGRCLCRPEFDG 625
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
CD C V ++ + C+ C C+P GS+
Sbjct: 626 LHCDSCRVGYHSYPH--CQVCSCDPRGSL 652
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 95/235 (40%), Gaps = 50/235 (21%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTA-----CNCNPIGSLNLQCNSE---GRCQCKPG 80
+G D P+C + +G A C+C+ G+L C + G+C CKP
Sbjct: 473 AKGFTDFPHCYPVPSFSHNDTGAQVLPAGQIVNCDCSAAGTLGNACRKDPQVGQCVCKPN 532
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G C++C H+ GC C C+ G +T CD GQC
Sbjct: 533 FQGVHCEQCAPGHHG---PGCLPCRCSGPGQKGDT--CDDETGQCVC------------- 574
Query: 141 RVQSRKNFD-PAGNRIWDLRRCK--RDTYPL------GHGGSLNLQCNSEGRCQCKPGVT 191
R F+ PA +R C +YPL G+L C+ GRC C+P
Sbjct: 575 ----RTGFEGPACDR------CAPGYFSYPLCQLCGCSPVGTLPEGCDESGRCLCRPEFD 624
Query: 192 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G CD C V ++ + C+ C C+P GS+ C S G C C+ G+ C+
Sbjct: 625 GLHCDSCRVGYHSYPH--CQVCSCDPRGSLDQF--C-SGAGMCHCRPGYAGSMCQ 674
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVT 82
+C+ +GP C++C+ Y+ S N C +C+C+P G++N +C G+C CKP V
Sbjct: 755 ECRAHVEGPKCDRCKPLYWNLSPANPFGCRSCSCDPRGTINGVAECQQGNGQCFCKPNVC 814
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
G C C ++ +A GC++C+C+ G++ C+ G C+
Sbjct: 815 GQMCTVCKDGYFRLDQADYFGCQTCQCDIGGALAQ--GCEPRTGACQ 859
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 17/180 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ G +C+ C Y G C +C+P G + + S+G C+C+ V G KCD
Sbjct: 710 CRPRVSGVHCDTCVPGTY---GFPRCEVGSCDPAGQASGNSSLSQGSCECRAHVEGPKCD 766
Query: 88 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
RC +++ A GC+SC C+P G++ C GQC + + G++ T V
Sbjct: 767 RCKPLYWNLSPANPFGCRSCSCDPRGTINGVAECQQGNGQC-FCKPNVCGQMCT---VCK 822
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
F + + C+ D GG+L C G CQC+P G C +HY
Sbjct: 823 DGYFRLDQADYFGCQTCQCDI-----GGALAQGCEPRTGACQCRPNTQGPTCSEPARDHY 877
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ---CNSE-GRCQCKPGVTGDKCDRCDV 91
P+C C+D + C CNC+ G L C+ + G+C+CKP + G +CD C
Sbjct: 1516 PDCVVCQDQTFGCHPLIGCEDCNCSRPGVEELTDPGCDLDSGQCKCKPNIIGRRCDACAP 1575
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y G C+ C+C AG+V CD + GQC
Sbjct: 1576 GFY--GYPNCRRCQCFEAGTVAGV--CDPITGQC 1605
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ GV+G +C +C ++ F E C C C +CD G+C C +
Sbjct: 2093 GQCHCRVGVSGAQCQQCAPGYWGFSEHSCTRCPCRGG-------HCDPRTGECTCPPGLS 2145
Query: 242 GAQCRS 247
G QC S
Sbjct: 2146 GKQCDS 2151
>gi|119568466|gb|EAW48081.1| laminin, alpha 2 (merosin, congenital muscular dystrophy), isoform
CRA_b [Homo sapiens]
Length = 2107
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECSRGHWNYPR--CNLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C H+++ C C+C G+ T CDS +C
Sbjct: 1087 GAKCTECSRGHWNYPR--CNLCDCFLPGTDATT--CDSETKKC 1125
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G+ C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 28/140 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCE 105
C I S N C +EG RC C G G C+RC + G G C+ CE
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYT--GSPGNPGGSCQECE 1528
Query: 106 CNPAGSVKNTPNCDSVKGQC 125
C+P GS+ CD V G C
Sbjct: 1529 CDPYGSLPVP--CDPVTGFC 1546
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|7920157|gb|AAF70550.1|AF151717_1 putative extracellular matrix protein MUSH2A [Mus musculus]
Length = 1461
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 127/266 (47%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG---- 50
C C+G ++ C +D + +NR G GG C DCQ G +CE C+D +Y+ G
Sbjct: 572 CQCHGHASSCHYDASVDPFPLEHNRGG-GGVCDDCQHHTTGRHCESCQDYFYRSVGADPA 630
Query: 51 -DNFCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
+ C C+CN G+ N L C+ G +C CK V+G +C +C YD GC+
Sbjct: 631 APDACKLCDCNRAGTRNGSLHCDPIGGQCDCKRRVSGRQCLQCQDGFYDLQALDPDGCRP 690
Query: 104 CECNPAGSVKNTPNCDSVKGQC--ESAQLSSR-GRVHTELRVQSRKNFDPAGNRIWDLRR 160
C CNP+G+V C GQC ++ + R R + + N D
Sbjct: 691 CNCNPSGTVDGDITCHQNSGQCSCKANVIGLRCNRCNFGFKFLQSFNGD-------GCEP 743
Query: 161 CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
C+ + + GS+N C+ G+C CK G KCD C N Y + C+ C+C+ AG
Sbjct: 744 CQCNLH-----GSVNQLCDPLSGQCACKKEAKGLKCDSCRENFYGLPWSACEVCDCSKAG 798
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
S T CD+ GQC CK NV G QC
Sbjct: 799 SQPGT-VCDTETGQCVCKPNVGGRQC 823
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 26/234 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C+ Y+ ++ + C CNC +G++N L+C+ S G+C CK
Sbjct: 810 GQCV-CKPNVGGRQCSQCKAGYFNLYQNDSHLCLTCNCEKMGTVNGSLRCDKSTGQCPCK 868
Query: 79 PGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C +C + ++ GC++C+C+ G++ + CD + GQC L R
Sbjct: 869 LGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGS-MCDPISGQCLC--LPHRQG 925
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK-PGVTGD 193
E Q + F + + C T G+++ CNS G+C C P TG
Sbjct: 926 RRCE---QCQPGFYSSPSNATGCLPCLCHT-----AGAVSHICNSVTGQCSCHDPSTTGR 977
Query: 194 KCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +C +++ F C+ C C+ AG+ T CD+V GQC CK+ V G++C
Sbjct: 978 SCHQCQESYFRFDPLTGRCRPCHCHVAGASNGT--CDAVTGQCFCKEFVTGSKC 1029
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C+ + + + DN C AC+C+ +G+L C+ G+C C P G
Sbjct: 867 CKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGSMCDPISGQCLCLPHRQGR 926
Query: 85 KCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ AG+V + C+SV GQC S+ GR + +
Sbjct: 927 RCEQCQPGFYSSPSNATGCLPCLCHTAGAVSHI--CNSVTGQCSCHDPSTTGRSCHQCQ- 983
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC--- 198
+S FDP R R C G+ N C++ G+C CK VTG KCD C
Sbjct: 984 ESYFRFDPLTGRC---RPCHCHV-----AGASNGTCDAVTGQCFCKEFVTGSKCDTCVPG 1035
Query: 199 ----DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
DVN+ G + S + P G V+++ + EC +
Sbjct: 1036 ASHLDVNNL-LGCSKTPSQQPPPRGWVQSSSTINVSWSPPECPN 1078
>gi|345480466|ref|XP_003424155.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-2-like [Nasonia
vitripennis]
Length = 3201
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 106/231 (45%), Gaps = 46/231 (19%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCD 87
C+ + G C++C Y+ S C+ACNC+P GS N C + G+C CKPGV G +C+
Sbjct: 991 CRPNVIGRQCDRCLPEYWGLSTGAGCSACNCDPTGSHNASCLEASGQCHCKPGVGGSRCE 1050
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
C +Y F GC+ CE CN G + C+ + G+C LS R
Sbjct: 1051 TCLPGYYGFSRNGCQLCEPCNRPGHI-----CEQLTGRCSCPALSLGERCD--------- 1096
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCN-SEGRCQCKPGVTGDK 194
RC+ +Y G GS QC S+G+C C+ G G +
Sbjct: 1097 -------------RCRPGSYDFRPGLGCRACGCSAAGSRKQQCAPSDGQCPCREGFAGRQ 1143
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CDRC HYD+ CK C C+ GS+ CD GQC CK NV G +C
Sbjct: 1144 CDRCAPGHYDYPR--CKPCNCDVNGSLG---ECDDSSGQCPCKPNVLGRRC 1189
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 113/282 (40%), Gaps = 89/282 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS------------ 71
G CL+C+G+ +G CEKC++ +Y D C C C+P+GS + C S
Sbjct: 843 GRCLECRGNTEGWKCEKCKEAHYGNPADLNCLPCACDPLGSTSTLCESRTGQCTCRPLFD 902
Query: 72 -----------------------------------EGRCQCKPGVTGDKCDRCDVNHYDF 96
G C C PG G +CD CD++HY
Sbjct: 903 GRDCSLCIEGYGNVTAGCIECDCGIGAEDVQCDPVSGLCSCSPGAVGPRCDHCDIDHYGL 962
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW 156
GC +C C+P GS ++ CD V GQC Q R N R
Sbjct: 963 SFDGCSACACSPLGSFSSS--CDLVSGQC-----------------QCRPN---VIGRQC 1000
Query: 157 DLRRCKRDTYPLGHG-----------GSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYD 204
D RC + + L G GS N C + G+C CKPGV G +C+ C +Y
Sbjct: 1001 D--RCLPEYWGLSTGAGCSACNCDPTGSHNASCLEASGQCHCKPGVGGSRCETCLPGYYG 1058
Query: 205 FGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F GC+ CE CN G + C+ + G+C C G +C
Sbjct: 1059 FSRNGCQLCEPCNRPGHI-----CEQLTGRCSCPALSLGERC 1095
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S C D+E GHCLDC+ + G CE C ++YY C C C
Sbjct: 1497 CQCNGRSEIC--DRE-------TGHCLDCRDNTAGVFCELCAESYYGDPNFGGCRECPCP 1547
Query: 61 PI-----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
+ ++ +++ C CKPG G +C+RC +Y + C C+CN AGS
Sbjct: 1548 QTDKKFSNTCIVRADNQVVCVCKPGYAGTRCERCSYGYYGYPSTPGGSCTPCKCNAAGSA 1607
Query: 113 KNTPNCDSVKGQC 125
+ CD+ GQC
Sbjct: 1608 SD--ECDTETGQC 1618
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 25/135 (18%)
Query: 1 CNCNGFSNRCFFDKELYN---------RTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNCNG + C +D ++ + GG CL+C G NCEKC YY+ +G
Sbjct: 295 CNCNGHATACRYDHQVAEMKLSMDIRGKYRGGGVCLNCSDYTTGINCEKCEAGYYRPNGI 354
Query: 51 ----DNFCTACNCNPIGSLNL---------QCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 97
C C+C+P GS L G C+C+ G +G KCD+C + F
Sbjct: 355 PPDDPEPCVPCDCHPRGSTGLCIPDDSFTSLGKVSGACECRLGYSGHKCDQCAAGYRQFP 414
Query: 98 EAGCKSCECNPAGSV 112
+ C C C+ G +
Sbjct: 415 D--CVPCPCDARGIL 427
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 107/321 (33%), Gaps = 115/321 (35%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C+CNG + C G C C+ GP C++C Y+ + C C
Sbjct: 719 CDCNGHAGSCDL---------MMGECSTCEHHTIGPKCDRCTVGYFGDATRGTPEDCHRC 769
Query: 58 NC---------NPIGSLNLQCNSEGR---CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
C +P L+ +SEG QC G TGD C+ CD+ FG+
Sbjct: 770 ACPLDIPTNNFSPSCQLDDPYDSEGDYVCTQCPLGYTGDHCETCDIGF--FGDPLTPGRT 827
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C P CD G+C + ++ G W +CK
Sbjct: 828 CEPCPCFGGP--CDQDTGRCLECRGNTEG---------------------WKCEKCKEAH 864
Query: 166 Y--------------PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC------------ 198
Y PLG +L C S G+C C+P G C C
Sbjct: 865 YGNPADLNCLPCACDPLGSTSTL---CESRTGQCTCRPLFDGRDCSLCIEGYGNVTAGCI 921
Query: 199 ----------------------------------DVNHYDFGEAGCKSCECNPAGSVKNT 224
D++HY GC +C C+P GS ++
Sbjct: 922 ECDCGIGAEDVQCDPVSGLCSCSPGAVGPRCDHCDIDHYGLSFDGCSACACSPLGSFSSS 981
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD V GQC+C+ NV G QC
Sbjct: 982 --CDLVSGQCQCRPNVIGRQC 1000
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKG 232
++ +++ C CKPG G +C+RC +Y + C C+CN AGS + CD+ G
Sbjct: 1559 VRADNQVVCVCKPGYAGTRCERCSYGYYGYPSTPGGSCTPCKCNAAGSASD--ECDTETG 1616
Query: 233 QCECKDNVEGAQC 245
QC CK G C
Sbjct: 1617 QCNCKPGSTGRDC 1629
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ G CE+C YY + CT C CN GS + +C++E G+C CKPG TG
Sbjct: 1569 CKPGYAGTRCERCSYGYYGYPSTPGGSCTPCKCNAAGSASDECDTETGQCNCKPGSTGRD 1628
Query: 86 CDRCDVNHYDFGEAGCKSC 104
C +C + F C SC
Sbjct: 1629 CSQCTQERHVFIGQNCMSC 1647
>gi|332212916|ref|XP_003255567.1| PREDICTED: laminin subunit alpha-2 [Nomascus leucogenys]
Length = 3062
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 115/267 (43%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C G C +C+ + G C+KC+ + C CNC
Sbjct: 920 CNANGSFSEVCH---------SQTGQC-ECRANVQGQRCDKCKAGTFGLQSARGCVPCNC 969
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+ G+ NCD
Sbjct: 970 NSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHLGN-----NCD 1024
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
G+C P +C +T+ GH
Sbjct: 1025 PKTGRC----------------------ICPPNTIGEKCSKCAPNTW--GHSITTGCKAC 1060
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G+C C P +G KC C H+++ C C+C G+ T
Sbjct: 1061 NCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYPR--CNLCDCFLPGTEAATC 1118
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
+ ++ K GQC CK NVEG C
Sbjct: 1119 DSETKKCSCSDQTGQCACKVNVEGIHC 1145
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCHCNAN 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 28/141 (19%)
Query: 1 CNCNGFSNRCFFDKELYNR----------TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G + C++D+ + R TG GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIHGKYTG-GGVCINCTQNTAGINCETCIDGFFRPKG 402
Query: 51 --DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYD 95
N+ C C+C+PIGS N C + G C CK G G CDRC +
Sbjct: 403 VSPNYPRPCQPCHCDPIGSSNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT- 461
Query: 96 FGEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 -GYPDCKACNCSGLGSKNEDP 481
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 105/270 (38%), Gaps = 66/270 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F +E G C CQ G C++C Y+ Q+ G CTAC
Sbjct: 967 CNCNSFGSKSFDCEE-------SGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACE 1015
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + GRC C P G+KC +C N + GCK+C C+ GS+
Sbjct: 1016 CSHLGN---NCDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDF-- 1070
Query: 117 NCDSVKGQC------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLG 169
C+ GQC A+ + R H W+ RC D + G
Sbjct: 1071 QCNVNTGQCNCHPKFSGAKCTECSRGH------------------WNYPRCNLCDCFLPG 1112
Query: 170 HGGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECN 216
+ C+SE G+C CK V G CDRC + GC SC C
Sbjct: 1113 TEAA---TCDSETKKCSCSDQTGQCACKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYC- 1168
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
T C KG G + +
Sbjct: 1169 ----FGTTTQCSEAKGLIRTWLMAYGGKLK 1194
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C+ C +G CE+C Y S C C C+P GSL + C+ G C C+PG
Sbjct: 1434 CMACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAM 1493
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1494 GRKCDGCKRWH 1504
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1360 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1410
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C +EG RC C G G C+RC + + C+ CEC+
Sbjct: 1411 CPLISSSNNFSPSCVAEGLDDYRCMACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1470
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ P CD V G C
Sbjct: 1471 PYGSLP-VP-CDPVTGFC 1486
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|148681092|gb|EDL13039.1| mCG140683 [Mus musculus]
Length = 1461
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 129/263 (49%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG---- 50
C C+G ++ C +D + +NR G GG C DCQ G +CE C+D +Y+ G
Sbjct: 572 CQCHGHASSCHYDASVDPFPLEHNRGG-GGVCDDCQHHTTGRHCESCQDYFYRPVGADPA 630
Query: 51 -DNFCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
+ C C+CN G+ N L C+ G +C CK V+G +C +C YD GC+
Sbjct: 631 APDACKLCDCNRAGTRNGSLHCDPIGGQCDCKRRVSGRQCLQCQDGFYDLQALDPDGCRP 690
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C CNP+G+V C GQC S + V LR +R NF + ++ C+
Sbjct: 691 CNCNPSGTVDGDITCHQNSGQC-----SCKANV-IGLRC-NRCNFGFKFLQSFNGDGCEP 743
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
L GS+N C+ G+C CK G KCD C N Y + C+ C+C+ AGS
Sbjct: 744 CQCNLH--GSVNQLCDPLSGQCACKKEAKGLKCDSCRENFYGLPWSACEVCDCSKAGSQP 801
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK NV G QC
Sbjct: 802 GT-VCDTETGQCVCKPNVGGRQC 823
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 26/234 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C+ Y+ ++ + C CNC +G++N L+C+ S G+C CK
Sbjct: 810 GQCV-CKPNVGGRQCSQCKAGYFNLYQNDSHLCLTCNCEKMGTVNGSLRCDKSTGQCPCK 868
Query: 79 PGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C +C + ++ GC++C+C+ G++ + CD + GQC L R
Sbjct: 869 LGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGS-MCDPISGQCLC--LPHRQG 925
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK-PGVTGD 193
E Q + F + + C T G+++ CNS G+C C P TG
Sbjct: 926 RRCE---QCQPGFYSSPSNATGCLPCLCHT-----AGAVSHICNSVTGQCSCHDPSTTGR 977
Query: 194 KCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +C +++ F C+ C C+ AG+ T CD+V GQC CK+ V G++C
Sbjct: 978 SCHQCQESYFRFDPLTGRCRPCHCHVAGASNGT--CDAVTGQCFCKEFVTGSKC 1029
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C+ + + + DN C AC+C+ +G+L C+ G+C C P G
Sbjct: 867 CKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGSMCDPISGQCLCLPHRQGR 926
Query: 85 KCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ AG+V + C+SV GQC S+ GR + +
Sbjct: 927 RCEQCQPGFYSSPSNATGCLPCLCHTAGAVSHI--CNSVTGQCSCHDPSTTGRSCHQCQ- 983
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC--- 198
+S FDP R R C G+ N C++ G+C CK VTG KCD C
Sbjct: 984 ESYFRFDPLTGRC---RPCHCHV-----AGASNGTCDAVTGQCFCKEFVTGSKCDICVPG 1035
Query: 199 ----DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
DVN+ G + S + P G V+++ + EC +
Sbjct: 1036 ASHLDVNNL-LGCSKTPSQQPPPRGWVQSSSTINVSWSPPECPN 1078
>gi|355560911|gb|EHH17597.1| hypothetical protein EGK_14036 [Macaca mulatta]
Length = 1810
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 110/231 (47%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 359 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 418
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDF-GE--AG 100
C C C+P GS N C+S G+C+CK V G+ CD C YD GE G
Sbjct: 419 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLHVEGEHCDVCKEGFYDLSGEDPFG 478
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 479 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 526
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C+ + +Y
Sbjct: 527 DLDGCRPCDCDL-----GGALNNSCSAESGQCSCRPHMIGRQCNEVEPGYY 572
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 116/314 (36%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 891 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 941
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C + + E G
Sbjct: 942 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGFFGNPSEVG 994
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + + CD G+C E Q G LR RK
Sbjct: 995 GLCQPCQCHNNIDMTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVC 1054
Query: 147 NF---------------DPAGNRIWDLR--------RCKRDTYPLGHGG----------- 172
N+ D A + L RC +T+ L G
Sbjct: 1055 NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAH 1114
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1115 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQST 1172
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1173 GQCVCVEGVEGPRC 1186
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 774 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 833
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV C+ V GQC
Sbjct: 834 TFGFGPSGCKPCECHLQGSVNAF--CNPVTGQC 864
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 101/275 (36%), Gaps = 85/275 (30%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F +E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 295 CFCYGHASECAPVDGFSEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 351
Query: 50 GDNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN S L S G C C+ G C++C +Y E
Sbjct: 352 NSNACKKCNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPER 411
Query: 100 G------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
C+ C C+PAGS +G C+S S G +
Sbjct: 412 DIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI----------------- 446
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GE--AGC 210
G+C+CK V G+ CD C YD GE GC
Sbjct: 447 ---------------------------AGQCRCKLHVEGEHCDVCKEGFYDLSGEDPFGC 479
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KSC CNP G++ CDS G C CK V G C
Sbjct: 480 KSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 514
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV C+ V
Sbjct: 803 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAF--CNPV 860
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 861 TGQCHCFQGVYARQC 875
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 100/237 (42%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS+N CN G+C C GV
Sbjct: 813 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGV 870
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 871 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDPVTGECLNCQDYTMG--HNCER 921
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 922 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQL----ACVCDPGYIGS 977
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + + E G C+ C+C+ + + CD G+C +C + EG C+
Sbjct: 978 RCDDCASGFFGNPSEVGGLCQPCQCHNNIDMTDPEACDKETGRCLKCLYHTEGEHCQ 1034
>gi|355745914|gb|EHH50539.1| hypothetical protein EGM_01389 [Macaca fascicularis]
Length = 1545
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 129/265 (48%), Gaps = 33/265 (12%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD---- 51
C CN S C++D + + G GG C DC+ + G NCE C+D ++++ G
Sbjct: 574 CQCNSHSKSCYYDVSVDPFPFEHFRGGGGVCNDCEHNTTGRNCELCKDYFFRQVGADPSA 633
Query: 52 -NFCTACNCNPIGSLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C C+C+ +G+ N + C+ G+C CK V+G +C+ C Y+ E GC C
Sbjct: 634 IDVCKPCDCDKVGARNGSILCDQIGGQCNCKRHVSGRQCNHCQNGFYNLQELDPDGCSPC 693
Query: 105 ECNPAGSVKNTPNCDSVKGQ--CESAQLSSR-GRVHTELRVQSRKNFDPAGNRIWDLRRC 161
CN +G+V C GQ C++ + R R + + N D C
Sbjct: 694 NCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDRCNFGFKFLRSINDD-------GCEPC 746
Query: 162 KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
+ + + GS+N CN G+C+CK G +CD C N Y CK+C+C+ AGS
Sbjct: 747 QCNLH-----GSVNKFCNPLSGQCECKKEAKGLQCDTCRENFYGLDVTNCKACDCDTAGS 801
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ T C++ GQC CK NVEG QC
Sbjct: 802 LPGT-VCNAKTGQCICKPNVEGRQC 825
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 112/232 (48%), Gaps = 32/232 (13%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + D+ C C CN GS+N CN G+C+CK G +
Sbjct: 716 CKANVIGLRCDRCNFGFKFLRSINDDGCEPCQCNLHGSVNKFCNPLSGQCECKKEAKGLQ 775
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC------ESAQLSSRGRVHTE 139
CD C N Y CK+C+C+ AGS+ T C++ GQC E Q + H
Sbjct: 776 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQCICKPNVEGRQCNKCLEGHFY 834
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKCD 196
LR N + C D G++N L C+ S G+C CK GVTG +C+
Sbjct: 835 LR----------QNNSFLCLPCNCD-----KAGTINGSLLCDKSTGQCPCKLGVTGLRCN 879
Query: 197 RCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+ + Y+ GC+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 880 QCEPHRYNLTIDNFQGCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 930
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + ++Y + ++F C CNC+ G++N L C+ S G+C CK
Sbjct: 812 GQCI-CKPNVEGRQCNKCLEGHFYLRQNNSFLCLPCNCDKAGTINGSLLCDKSTGQCPCK 870
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ GC+ CEC+ G++ T CD + GQC
Sbjct: 871 LGVTGLRCNQCEPHRYNLTIDNFQGCQMCECDSLGTLPGT-ICDPISGQC---------- 919
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G GS++ CNS
Sbjct: 920 ----LCVPNRQG-----------RRCNQCQPGFYISPGSANGCLPCSCHTAGSVHHICNS 964
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C ++ F C+ C C+ +G++ T C V GQC C
Sbjct: 965 LTGQCVCQDASIAGQRCDQCKDRYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1022
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1023 KQFVTGSKC 1031
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 24/229 (10%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-NLQCNSE-GRCQCKPGVTGDK 85
+C+ + G C+ CR+N+Y N C AC+C+ GSL CN++ G+C CKP V G +
Sbjct: 766 ECKKEAKGLQCDTCRENFYGLDVTN-CKACDCDTAGSLPGTVCNAKTGQCICKPNVEGRQ 824
Query: 86 CDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
C++C H+ + C C C+ AG++ + CD GQC +L G LR
Sbjct: 825 CNKCLEGHFYLRQNNSFLCLPCNCDKAGTINGSLLCDKSTGQCP-CKLGVTG-----LRC 878
Query: 143 QS--RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCD 199
++ + + C+ D+ G C+ G+C C P G +C++C
Sbjct: 879 NQCEPHRYNLTIDNFQGCQMCECDSL----GTLPGTICDPISGQCLCVPNRQGRRCNQCQ 934
Query: 200 VNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD-NVEGAQC 245
Y G A GC C C+ AGSV + C+S+ GQC C+D ++ G +C
Sbjct: 935 PGFYISPGSANGCLPCSCHTAGSVHHI--CNSLTGQCVCQDASIAGQRC 981
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 869 CKLGVTGLRCNQCEPHRYNLTIDNFQGCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 928
Query: 85 KCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y G A GC C C+ AGSV + C+S+ GQC S G+ + +
Sbjct: 929 RCNQCQPGFYISPGSANGCLPCSCHTAGSVHHI--CNSLTGQCVCQDASIAGQRCDQCK- 985
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 986 DRYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1037
Query: 200 VNHYD 204
+H D
Sbjct: 1038 ASHLD 1042
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++C+D Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 967 GQCVCQDASIAGQRCDQCKDRYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1024
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1025 FVTGSKCDACVPSASHLD 1042
>gi|355747928|gb|EHH52425.1| hypothetical protein EGM_12863 [Macaca fascicularis]
Length = 1810
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 110/231 (47%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 359 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 418
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDF-GE--AG 100
C C C+P GS N C+S G+C+CK V G+ CD C YD GE G
Sbjct: 419 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLHVEGEHCDVCKEGFYDLSGEDPFG 478
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 479 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 526
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C+ + +Y
Sbjct: 527 DLDGCRPCDCDL-----GGALNNSCSAESGQCSCRPHMIGRQCNEVEPGYY 572
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 115/314 (36%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 891 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 941
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C + + E G
Sbjct: 942 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGFFGNPSEVG 994
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + CD G+C E Q G LR RK
Sbjct: 995 GLCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVC 1054
Query: 147 NF---------------DPAGNRIWDLR--------RCKRDTYPLGHGG----------- 172
N+ D A + L RC +T+ L G
Sbjct: 1055 NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAH 1114
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1115 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQST 1172
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1173 GQCVCVEGVEGPRC 1186
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 774 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 833
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV C+ V GQC
Sbjct: 834 TFGFGPSGCKPCECHLQGSVNAF--CNPVTGQC 864
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 101/275 (36%), Gaps = 85/275 (30%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F +E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 295 CFCYGHASECAPVDGFSEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 351
Query: 50 GDNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN S L S G C C+ G C++C +Y E
Sbjct: 352 NSNACKKCNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPER 411
Query: 100 G------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
C+ C C+PAGS +G C+S S G +
Sbjct: 412 DIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI----------------- 446
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GE--AGC 210
G+C+CK V G+ CD C YD GE GC
Sbjct: 447 ---------------------------AGQCRCKLHVEGEHCDVCKEGFYDLSGEDPFGC 479
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KSC CNP G++ CDS G C CK V G C
Sbjct: 480 KSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 514
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV C+ V
Sbjct: 803 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAF--CNPV 860
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 861 TGQCHCFQGVYARQC 875
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 99/237 (41%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS+N CN G+C C GV
Sbjct: 813 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGV 870
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 871 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDPVTGECLNCQDYTMG--HNCER 921
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 922 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQL----ACVCDPGYIGS 977
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + + E G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 978 RCDDCASGFFGNPSEVGGLCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1034
>gi|402864545|ref|XP_003896520.1| PREDICTED: laminin subunit beta-1 [Papio anubis]
Length = 1786
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 110/231 (47%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDF-GE--AG 100
C C C+P GS N C+S G+C+CK V G+ CD C YD GE G
Sbjct: 395 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLHVEGEHCDVCKEGFYDLSGEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCSAESGQCSCRPHMIGRQCNEVEPGYY 548
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 115/314 (36%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C + + E G
Sbjct: 918 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGFFGNPSEVG 970
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + CD G+C E Q G LR RK
Sbjct: 971 GLCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVC 1030
Query: 147 NF---------------DPAGNRIWDLR--------RCKRDTYPLGHGG----------- 172
N+ D A + L RC +T+ L G
Sbjct: 1031 NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAH 1090
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1091 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQST 1148
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1149 GQCVCVEGVEGPRC 1162
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK+CEC+ GSV C+ V GQC
Sbjct: 810 TFGFGPSGCKACECHLQGSVNAF--CNPVTGQC 840
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 102/275 (37%), Gaps = 85/275 (30%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFNEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN S L S G C C+ G C++C +Y E
Sbjct: 328 NSNACKKCNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPER 387
Query: 100 G------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
C+ C C+PAGS +G C+S S G +
Sbjct: 388 DIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI----------------- 422
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GE--AGC 210
G+C+CK V G+ CD C YD GE GC
Sbjct: 423 ---------------------------AGQCRCKLHVEGEHCDVCKEGFYDLSGEDPFGC 455
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KSC CNP G++ CDS G C CK V G C
Sbjct: 456 KSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 490
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK+CEC+ GSV C+ V
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKACECHLQGSVNAF--CNPV 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 837 TGQCHCFQGVYARQC 851
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 102/247 (41%), Gaps = 48/247 (19%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C AC C+ GS+N CN G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKACECHLQGSVNAFCNPVTGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 847 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDPVTGECLNCQDYTMG--HNCER 897
Query: 142 VQSRKNFDP------------------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
+ DP +G + R C +D L +
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQF--ARSCYQDPVTL------------QLA 943
Query: 184 CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDN 239
C C PG G +CD C + + E G C+ C+C+ + CD G+C +C +
Sbjct: 944 CVCDPGYIGSRCDDCASGFFGNPSEVGGLCQPCQCHNNIDTTDPEACDKETGRCLKCLYH 1003
Query: 240 VEGAQCR 246
EG C+
Sbjct: 1004 TEGEHCQ 1010
>gi|297289124|ref|XP_001090393.2| PREDICTED: laminin subunit beta-1 [Macaca mulatta]
Length = 1786
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 110/231 (47%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDF-GE--AG 100
C C C+P GS N C+S G+C+CK V G+ CD C YD GE G
Sbjct: 395 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLHVEGEHCDVCKEGFYDLSGEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCSAESGQCSCRPHMIGRQCNEVEPGYY 548
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 115/314 (36%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C + + E G
Sbjct: 918 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGFFGNPSEVG 970
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + CD G+C E Q G LR RK
Sbjct: 971 GLCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVC 1030
Query: 147 NF---------------DPAGNRIWDLR--------RCKRDTYPLGHGG----------- 172
N+ D A + L RC +T+ L G
Sbjct: 1031 NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAH 1090
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1091 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQST 1148
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1149 GQCVCVEGVEGPRC 1162
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV C+ V GQC
Sbjct: 810 TFGFGPSGCKPCECHLQGSVNAF--CNPVTGQC 840
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 101/275 (36%), Gaps = 85/275 (30%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F +E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFSEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN S L S G C C+ G C++C +Y E
Sbjct: 328 NSNACKKCNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPER 387
Query: 100 G------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
C+ C C+PAGS +G C+S S G +
Sbjct: 388 DIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI----------------- 422
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GE--AGC 210
G+C+CK V G+ CD C YD GE GC
Sbjct: 423 ---------------------------AGQCRCKLHVEGEHCDVCKEGFYDLSGEDPFGC 455
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KSC CNP G++ CDS G C CK V G C
Sbjct: 456 KSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 490
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV C+ V
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAF--CNPV 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 837 TGQCHCFQGVYARQC 851
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 99/237 (41%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS+N CN G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 847 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDPVTGECLNCQDYTMG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQL----ACVCDPGYIGS 953
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + + E G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 954 RCDDCASGFFGNPSEVGGLCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1010
>gi|384946996|gb|AFI37103.1| laminin subunit beta-1 precursor [Macaca mulatta]
Length = 1786
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 110/231 (47%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDF-GE--AG 100
C C C+P GS N C+S G+C+CK V G+ CD C YD GE G
Sbjct: 395 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLHVEGEHCDVCKEGFYDLSGEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCSAESGQCSCRPHMIGRQCNEVEPGYY 548
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 115/314 (36%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C + + E G
Sbjct: 918 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGFFGNPSEVG 970
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + CD G+C E Q G LR RK
Sbjct: 971 GLCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVC 1030
Query: 147 NF---------------DPAGNRIWDLR--------RCKRDTYPLGHGG----------- 172
N+ D A + L RC +T+ L G
Sbjct: 1031 NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAH 1090
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1091 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQST 1148
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1149 GQCVCVEGVEGPRC 1162
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV C+ V GQC
Sbjct: 810 TFGFGPSGCKPCECHLQGSVNAF--CNPVTGQC 840
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 101/275 (36%), Gaps = 85/275 (30%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F +E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFSEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN S L S G C C+ G C++C +Y E
Sbjct: 328 NSNACKKCNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPER 387
Query: 100 G------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
C+ C C+PAGS +G C+S S G +
Sbjct: 388 DIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI----------------- 422
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GE--AGC 210
G+C+CK V G+ CD C YD GE GC
Sbjct: 423 ---------------------------AGQCRCKLHVEGEHCDVCKEGFYDLSGEDPFGC 455
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KSC CNP G++ CDS G C CK V G C
Sbjct: 456 KSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 490
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV C+ V
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAF--CNPV 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 837 TGQCHCFQGVYARQC 851
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 99/237 (41%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS+N CN G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 847 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDPVTGECLNCQDYTMG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQL----ACVCDPGYIGS 953
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + + E G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 954 RCDDCASGFFGNPSEVGGLCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1010
>gi|25145020|ref|NP_492775.2| Protein LAM-3 [Caenorhabditis elegans]
gi|3328188|gb|AAC26793.1| laminin alpha chain [Caenorhabditis elegans]
gi|21617790|emb|CAB03385.3| Protein LAM-3 [Caenorhabditis elegans]
Length = 3102
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 120/227 (52%), Gaps = 19/227 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G CL C G G +CE C+++++ + + C C C+ G++N QC+ E G C+CK
Sbjct: 908 GKCLKCIGHTTGDSCESCKEHHWGNAQLHTCKPCGCHTQGAVNPQCSEENGECECKENYI 967
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC NH D E GC +C+CN GS+ + +CD V GQC Q G+ + R
Sbjct: 968 GAQCDRCKENHGDV-ENGCPACDCNDTGSIGS--DCDQVSGQCNCKQ-GVFGKQCDQCR- 1022
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVN 201
S NF AG + C + Y G + +C+ + G+C+C+ V G C++C
Sbjct: 1023 PSYFNFTDAGCQF-----CHCNIY----GSIEDGKCDQTTGKCECRENVEGTMCEKCADG 1073
Query: 202 HYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+++ GC+ C C+P GS +C+ V GQC CK V G +C S
Sbjct: 1074 YFNITSGDGCEDCGCDPTGS--EDVSCNLVTGQCVCKPGVTGLKCDS 1118
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 111/233 (47%), Gaps = 44/233 (18%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
+C+ + G C++C++N+ +N C AC+CN GS+ C+ G+C CK GV G +C
Sbjct: 961 ECKENYIGAQCDRCKENH--GDVENGCPACDCNDTGSIGSDCDQVSGQCNCKQGVFGKQC 1018
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
D+C ++++F +AGC+ C CN GS+++ CD G+CE R+
Sbjct: 1019 DQCRPSYFNFTDAGCQFCHCNIYGSIEDG-KCDQTTGKCE-----------------CRE 1060
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCN-SEGRCQCKPGVTGDK 194
N + +C + + G GS ++ CN G+C CKPGVTG K
Sbjct: 1061 NVEGTM-----CEKCADGYFNITSGDGCEDCGCDPTGSEDVSCNLVTGQCVCKPGVTGLK 1115
Query: 195 CDRCDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CD C N Y GC CE PA G V CD + G C C N G C
Sbjct: 1116 CDSCLPNFYGLTSEGCTECEPCPAPGQV-----CDPIDGSCVCPPNTVGEMCE 1163
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 116/238 (48%), Gaps = 44/238 (18%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN----PIGSLNLQCNSE-GRC-QCKP 79
C++C +G CE C D +++ C C CN P+G N C+SE G+C +C
Sbjct: 858 CINCPLGYEGNKCEYCSDGFFEDPLTGKCIECTCNGNIDPMGIGN--CDSETGKCLKCIG 915
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TGD C+ C +H+ + CK C C+ G+V P C G+CE
Sbjct: 916 HTTGDSCESCKEHHWGNAQLHTCKPCGCHTQGAVN--PQCSEENGECEC----------- 962
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNLQCNS-EGRCQCKP 188
++N+ A RCK + + +G GS+ C+ G+C CK
Sbjct: 963 ------KENYIGA-----QCDRCKENHGDVENGCPACDCNDTGSIGSDCDQVSGQCNCKQ 1011
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GV G +CD+C ++++F +AGC+ C CN GS+++ CD G+CEC++NVEG C
Sbjct: 1012 GVFGKQCDQCRPSYFNFTDAGCQFCHCNIYGSIEDG-KCDQTTGKCECRENVEGTMCE 1068
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 108/231 (46%), Gaps = 37/231 (16%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKC 86
+C+ + +G CEKC D Y+ + + C C C+P GS ++ CN G+C CKPGVTG KC
Sbjct: 1057 ECRENVEGTMCEKCADGYFNITSGDGCEDCGCDPTGSEDVSCNLVTGQCVCKPGVTGLKC 1116
Query: 87 DRCDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
D C N Y GC CE PA G V CD + G C ++ G + +
Sbjct: 1117 DSCLPNFYGLTSEGCTECEPCPAPGQV-----CDPIDGSCVCPP-NTVGEMCENCTTNA- 1169
Query: 146 KNFDPAGNRIWD---LRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
WD L CK D +G G + CN+ G+C+CK G KCD C
Sbjct: 1170 ----------WDYHPLNGCKLCDCSDIGSDGGM---CNTFTGQCKCKAAYVGLKCDLCTH 1216
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVK------GQCECKDNVEGAQC 245
++F C+ C CN AG+ + C + G+C CK NV G +C
Sbjct: 1217 GFFNF--PTCEPCGCNAAGT--DPLQCKDGQCLCNEIGECPCKKNVHGTKC 1263
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 27/151 (17%)
Query: 1 CNCNGFSNRCFFDKEL----YNRTGHG-----GHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
C C ++ C +D EL ++ T G G CL+C + +G NCE+C+D YY+ SG
Sbjct: 353 CQCFNHAHSCVYDDELDRNKWSITPEGVYEGGGRCLECAHNTEGFNCERCKDGYYRPSGL 412
Query: 51 ----DNFCTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDF 96
++ C C C+P+GS++ C G C CKPG G +C+RC + +
Sbjct: 413 SHYREDACRTCECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGYRN- 471
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C+ C CN AGSV N CD QC++
Sbjct: 472 -HPTCEPCPCNRAGSV-NFDTCDGASCQCKA 500
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 103/246 (41%), Gaps = 39/246 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-------CTACNCNP-----------IG 63
G CL+C+ + G CE C+ + G C + + NP +G
Sbjct: 788 GECLNCRHNTTGSRCELCKPGHVGNPSRGGELGACEQCECPSLDLNPNPECISTELAVLG 847
Query: 64 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVK 122
S+ ++ C G G+KC+ C ++ G C C CN NCDS
Sbjct: 848 SVASNEDNYVCINCPLGYEGNKCEYCSDGFFEDPLTGKCIECTCNGNIDPMGIGNCDSET 907
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG--HGGSLNLQCNS 180
G+C + G + N L CK P G G++N QC+
Sbjct: 908 GKCLKCIGHTTGDSCESCKEHHWGNA--------QLHTCK----PCGCHTQGAVNPQCSE 955
Query: 181 E-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
E G C+CK G +CDRC NH D E GC +C+CN GS+ + +CD V GQC CK
Sbjct: 956 ENGECECKENYIGAQCDRCKENHGDV-ENGCPACDCNDTGSIGS--DCDQVSGQCNCKQG 1012
Query: 240 VEGAQC 245
V G QC
Sbjct: 1013 VFGKQC 1018
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQ 76
G G C C+ G CE C YY Q G C+ C+C+P GSL+ CN G+C+
Sbjct: 1609 GRGYVCNSCKPGYTGQYCETCVAGYYGDPQHIGGT-CSPCDCHPDGSLHGACNPLSGQCE 1667
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
CKPGVTG C C H F C SC+
Sbjct: 1668 CKPGVTGRTCSMCQERH-AFINRVCTSCD 1695
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 24/139 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C+C+G S C D + C DC+ + G CE C Y ++ G N CT C
Sbjct: 1540 CSCHGHSQTCNPDTSV---------CTDCEHNTFGDFCEHCLPGYIGDAREGGANACTKC 1590
Query: 58 NCNPI-GSLNLQCNS--EGRC----QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECN 107
C + S + C + GR CKPG TG C+ C +Y D G C C+C+
Sbjct: 1591 ACPLVENSFSDSCVAVDHGRGYVCNSCKPGYTGQYCETCVAGYYGDPQHIGGTCSPCDCH 1650
Query: 108 PAGSVKNTPNCDSVKGQCE 126
P GS+ C+ + GQCE
Sbjct: 1651 PDGSLHGA--CNPLSGQCE 1667
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
CKPG TG C+ C +Y D G C C+C+P GS+ C+ + GQCECK V G
Sbjct: 1617 CKPGYTGQYCETCVAGYYGDPQHIGGTCSPCDCHPDGSLHGA--CNPLSGQCECKPGVTG 1674
Query: 243 AQC 245
C
Sbjct: 1675 RTC 1677
>gi|426362868|ref|XP_004048574.1| PREDICTED: multiple epidermal growth factor-like domains protein 9,
partial [Gorilla gorilla gorilla]
Length = 401
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 24 ECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPHGALSILCNSSGKCQCKVGVIGSICD 83
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 84 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEG 134
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ + E C QCK G G C++C+ +Y+F
Sbjct: 135 FYQSPDATKECLRCPCSA--VTSTGSCSIKSSELEPECDQCKDGYIGLNCNKCENGYYNF 192
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 193 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 234
>gi|403257537|ref|XP_003921367.1| PREDICTED: laminin subunit beta-1 [Saimiri boliviensis boliviensis]
Length = 1732
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 110/224 (49%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G +CE+C+ YYQ NF
Sbjct: 281 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRSCEQCKPFYYQHPERDVRDPNF 340
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G++CD C YD G
Sbjct: 341 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKSHVEGERCDICKEGFYDLSTEDPFG 400
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L GR H + Q N + R
Sbjct: 401 CKSCACNPLGTIPGGNPCDSETGHCYCKRL-VMGR-HCD---QCLPEHWGLSNDLDGCRP 455
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN +C++E G+C C+P + G +C + +Y
Sbjct: 456 CDCDL-----GGALNNRCSAESGQCSCRPHMIGRQCSEVEPGYY 494
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 106/277 (38%), Gaps = 61/277 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG + C G CL+CQ G NCE+C YY
Sbjct: 813 CQCNGHAEDC---------DPVTGECLNCQDYTVGHNCERCLAGYYGDPIIGSGDHCRPC 863
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C + + E G
Sbjct: 864 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGFFGNPSEVG 916
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WD 157
C+ C+C+ + CD G+C + HTE F G+ + D
Sbjct: 917 GSCQPCQCHNNIDTTDPEACDKETGRC------LKCLYHTEGEHCQFCRFGYYGDALRQD 970
Query: 158 LRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE-A 208
R+C + G++ CN + G+C C P VTG CDRC N +
Sbjct: 971 CRKCV-----CNYLGTVQEHCNGSDCQCDKATGQCLCLPNVTGQNCDRCAPNTWQLASGT 1025
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C CN A S P+C+ GQC C G C
Sbjct: 1026 GCGPCNCNAARSFG--PSCNEFTGQCHCMPGFGGRTC 1060
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR + S T AC C+P GS + C+ G +CQC+P V G C+RC
Sbjct: 696 PMTDVCRSIIFSISALLHQTGLACECDPQGSFSSVCDPNGGQCQCRPNVVGRTCNRCAPG 755
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CECN GS+ CD V GQC
Sbjct: 756 TFGFGPSGCKRCECNLQGSLNAF--CDPVTGQC 786
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQC+P V G C+RC + FG +GCK CECN GS+ CD V GQC C V
Sbjct: 736 GQCQCRPNVVGRTCNRCAPGTFGFGPSGCKRCECNLQGSLNAF--CDPVTGQCRCFQGVY 793
Query: 242 GAQC 245
QC
Sbjct: 794 ARQC 797
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 90/248 (36%), Gaps = 79/248 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE C D ++ + N C CNCN S L
Sbjct: 242 GHCM-CRHNTKGLNCELCMDFHHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLAT 300
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDS 120
S G C C+ G C++C +Y E C+ C C+PAGS
Sbjct: 301 GNVSGGVCDDCQHNTMGRSCEQCKPFYYQHPERDVRDPNFCERCTCDPAGSQN------- 353
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+G C+S S G +
Sbjct: 354 -EGICDSYTDFSTGLI-------------------------------------------- 368
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G+C+CK V G++CD C YD GCKSC CNP G++ CDS G C CK
Sbjct: 369 AGQCRCKSHVEGERCDICKEGFYDLSTEDPFGCKSCACNPLGTIPGGNPCDSETGHCYCK 428
Query: 238 DNVEGAQC 245
V G C
Sbjct: 429 RLVMGRHC 436
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 100/237 (42%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C CN GSLN C+ G+C+C GV
Sbjct: 735 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKRCECNLQGSLNAFCDPVTGQCRCFQGV 792
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 793 YARQCDRCLPGHWGF--PSCQPCQCN-----GHAEDCDPVTGECLNCQDYTVG--HNCER 843
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 844 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQLA----CVCDPGYIGS 899
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + + E G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 900 RCDDCASGFFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 956
>gi|363731756|ref|XP_419417.3| PREDICTED: usherin [Gallus gallus]
Length = 5209
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 128/269 (47%), Gaps = 41/269 (15%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF- 53
C C + C +D E+ Y R G GG C +CQ + G NCE C+D +Y+++G +
Sbjct: 576 CQCYSHAVSCHYDLEMDPFPQEYYR-GSGGVCDNCQHNTTGRNCELCKDFHYRQAGADLS 634
Query: 54 ----CTACNCNPIGSLN--LQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
C C+C G+ N L C N G+C CK V+G +C++C Y+ ++ GC
Sbjct: 635 AIDVCKPCDCYATGTKNKSLLCDNIGGQCNCKRHVSGRQCNQCQEGFYNLQQSNPDGCSP 694
Query: 104 CECNPAGSVKNTPNCDSVKGQ--CESAQLSSR----GRVHTELRVQSRKNFDPAGNRIWD 157
C CN +G+V C GQ C++ + R LR + +P
Sbjct: 695 CNCNTSGTVNGDITCHQNSGQCKCKANVIGPRCDSCNFGFKALRYSNEDGCEP------- 747
Query: 158 LRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
C +++ GS+N CN G+C CK V G CD C N Y GCK+CECN
Sbjct: 748 ---CWCNSH-----GSVNQFCNPLTGQCNCKEQVKGLLCDTCVDNFYGLDVTGCKACECN 799
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AGS T CD+ GQC CK N+ G QC
Sbjct: 800 IAGSFAGT-VCDARTGQCACKPNIGGRQC 827
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 112/235 (47%), Gaps = 38/235 (16%)
Query: 29 CQGDRDGPNCEKCRDNY--YQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + GP C+ C + + S ++ C C CN GS+N CN G+C CK V G
Sbjct: 718 CKANVIGPRCDSCNFGFKALRYSNEDGCEPCWCNSHGSVNQFCNPLTGQCNCKEQVKGLL 777
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR-----VHTEL 140
CD C N Y GCK+CECN AGS T CD+ GQC + + + GR +
Sbjct: 778 CDTCVDNFYGLDVTGCKACECNIAGSFAGT-VCDARTGQC-ACKPNIGGRQCNECLDGYH 835
Query: 141 RVQSRKNF-------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
R+Q +F D AG GSL L S G+C CK GV G
Sbjct: 836 RIQVNHSFVCLPCDCDKAGTV----------------NGSL-LCDKSTGQCPCKAGVIGL 878
Query: 194 KCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C++C ++ Y+ GC+ C+C+ G++ T CD V GQC C + +G +C
Sbjct: 879 QCNQCMLHTYNLSMRNLLGCQRCDCDAKGTLAGT-VCDHVSGQCVCLPHRQGRRC 932
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 116/239 (48%), Gaps = 45/239 (18%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCKPGVTG 83
C+ + G C +C D Y+ Q + C C+C+ G++N L C+ S G+C CK GV G
Sbjct: 818 CKPNIGGRQCNECLDGYHRIQVNHSFVCLPCDCDKAGTVNGSLLCDKSTGQCPCKAGVIG 877
Query: 84 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+C++C ++ Y+ GC+ C+C+ G++ T CD V GQC L R
Sbjct: 878 LQCNQCMLHTYNLSMRNLLGCQRCDCDAKGTLAGT-VCDHVSGQC--VCLPHR------- 927
Query: 141 RVQSRK--------NFDPAGNRIWDLRRCKRDTYP-LGH-GGSLNLQCNS-EGRCQCK-P 188
Q R+ F P+ + C P L H GS+N C+ G+C C+
Sbjct: 928 --QGRRCNECKPGFYFSPS-----SVTGC----LPCLCHTAGSVNQVCDKLTGQCICQDV 976
Query: 189 GVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG C+RC +H+ F C+ C C+PAG++ T C V GQC CK V G +C
Sbjct: 977 SVTGRTCERCKEHHFGFDSVTGRCQHCNCHPAGAISGT--CHLVTGQCVCKQFVTGLKC 1033
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 179 NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE 235
N G+C CK V+G +C++C Y+ ++ GC C CN +G+V C GQC+
Sbjct: 658 NIGGQCNCKRHVSGRQCNQCQEGFYNLQQSNPDGCSPCNCNTSGTVNGDITCHQNSGQCK 717
Query: 236 CKDNVEGAQCRS 247
CK NV G +C S
Sbjct: 718 CKANVIGPRCDS 729
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 88/210 (41%), Gaps = 26/210 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQC--NSEGRCQCKPGVTGD 84
C+ G C +C + Y S N C C+C+ G+L + G+C C P G
Sbjct: 871 CKAGVIGLQCNQCMLHTYNLSMRNLLGCQRCDCDAKGTLAGTVCDHVSGQCVCLPHRQGR 930
Query: 85 KCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C+ C Y GC C C+ AGSV CD + GQC +S GR +
Sbjct: 931 RCNECKPGFYFSPSSVTGCLPCLCHTAGSVNQV--CDKLTGQCICQDVSVTGRTCERCK- 987
Query: 143 QSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDV 200
+ FD R C+ + +P G+++ C+ G+C CK VTG KCD C
Sbjct: 988 EHHFGFDSVTGR------CQHCNCHP---AGAISGTCHLVTGQCVCKQFVTGLKCDNCVP 1038
Query: 201 N------HYDFGEAGCKSCECNPAGSVKNT 224
N H FG + + P G V N+
Sbjct: 1039 NASNLDVHNLFGCSKTPFQQPPPTGEVLNS 1068
>gi|410338567|gb|JAA38230.1| laminin, beta 1 [Pan troglodytes]
Length = 1786
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 395 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C +E G+C C+P V G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCFAESGQCSCRPHVIGRQCNEVEPGYY 548
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 116/314 (36%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C ++ + E G
Sbjct: 918 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGYFGNPSEVG 970
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + CD G+C E Q G LR RK
Sbjct: 971 GSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVC 1030
Query: 147 NF---------------DPAGNRIWDLR--------RCKRDTYPLGHGG----------- 172
N+ D A + L RC +T+ L G
Sbjct: 1031 NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAH 1090
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1091 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQST 1148
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1149 GQCVCVEGVEGPRC 1162
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 102/278 (36%), Gaps = 91/278 (32%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFNEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNPIGSLNLQCN------------SEGRCQ-CKPGVTGDKCDRCDVNHYDF 96
N C CNCN ++ C+ S G C C+ G C++C +Y
Sbjct: 328 NSNACKKCNCN---EHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQH 384
Query: 97 GEAG------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
E C+ C C+PAGS +G C+S S G +
Sbjct: 385 PERDIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI-------------- 422
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
G+C+CK V G+ CD C YD
Sbjct: 423 ------------------------------AGQCRCKLNVEGEHCDVCKEGFYDLSSEDP 452
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GCKSC CNP G++ CDS G C CK V G C
Sbjct: 453 FGCKSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 490
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK CEC+ GSV C+ V GQC
Sbjct: 810 TFGFGPGGCKPCECHLQGSVNAF--CNPVTGQC 840
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK CEC+ GSV C+ V
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPGGCKPCECHLQGSVNAF--CNPV 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 837 TGQCHCFQGVYARQC 851
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 46/216 (21%)
Query: 54 CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C C C+ GS+N CN G+C C GV +CDRC H+ F C+ C+CN
Sbjct: 818 CKPCECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGF--PSCQPCQCN----- 870
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP------------------AGNR 154
+ +CD V G+C + Q + G H R + DP +G +
Sbjct: 871 GHADDCDPVTGECLNCQDYTMG--HNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQ 928
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CK 211
R C +D L + C C PG G +CD C ++ + E G C+
Sbjct: 929 F--ARSCYQDPVTL------------QLACVCDPGYIGSRCDDCASGYFGNPSEVGGSCQ 974
Query: 212 SCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
C+C+ + CD G+C +C + EG C+
Sbjct: 975 PCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1010
>gi|119568465|gb|EAW48080.1| laminin, alpha 2 (merosin, congenital muscular dystrophy), isoform
CRA_a [Homo sapiens]
Length = 2480
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECSRGHWNYPR--CNLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C H+++ C C+C G+ T CDS +C
Sbjct: 1087 GAKCTECSRGHWNYPR--CNLCDCFLPGTDATT--CDSETKKC 1125
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G+ C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 60/140 (42%), Gaps = 28/140 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCE 105
C I S N C +EG RC C G G C+RC + G G C+ CE
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYT--GSPGNPGGSCQECE 1528
Query: 106 CNPAGSVKNTPNCDSVKGQC 125
C+P GS+ P CD V G C
Sbjct: 1529 CDPYGSLP-VP-CDPVTGFC 1546
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|345777915|ref|XP_538819.3| PREDICTED: multiple EGF-like-domains 9 [Canis lupus familiaris]
Length = 457
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G C+ CR+ +Y C C+CNP G+L+ C+S G+CQCK GVTG CD
Sbjct: 80 ECQPHYQGLRCDSCREGFYLNLTSGLCLPCDCNPYGALSTICSSSGKCQCKAGVTGSPCD 139
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F E+ C C+CN + +CD + G C + Q +S+G H E ++
Sbjct: 140 RCQDGYYGFSESSCLPCQCN-----NRSASCDVLTGACLNCQENSKGD-HCE---DCKEG 190
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS ++ E RC QCK G TG C++C+ +Y+
Sbjct: 191 FYQSPDATKECLRCPCSA--VTSTGSCVIESGELEPRCVQCKEGYTGRNCNKCENGYYN- 247
Query: 206 GEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
++ C C+C+ TP C G+C C N G C
Sbjct: 248 SDSICTKCQCHGHVDPITTPKICKPESGECINCLHNTTGFWCE 290
>gi|350579570|ref|XP_003480641.1| PREDICTED: multiple EGF-like-domains 9 [Sus scrofa]
Length = 599
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G +CE C++ ++ C CNC+P G+L++ CNS G+C+CK GVTG CD
Sbjct: 222 ECQPGYQGLHCETCKEGFHLNHTSGLCLPCNCSPHGALSVLCNSSGKCRCKVGVTGSSCD 281
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +YDF + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 282 RCQDGYYDFNKNGCLPCQCN-----NRSASCDALTGACLNCQDNSKGD-HCE---ECKEG 332
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS ++ E +C QCK G TG C+ C+ +Y+
Sbjct: 333 FYQSLDATKECLRCPCSA--VTSTGSCIIELGELEPKCVQCKAGYTGQNCNECEHGYYN- 389
Query: 206 GEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
++ C C+C+ + TP C G+C +C N G C
Sbjct: 390 SDSICMECQCHGHVDPRKTPEICKPDSGECIDCLHNTTGFWCE 432
>gi|395738869|ref|XP_002818388.2| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-1 [Pongo
abelii]
Length = 1936
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 107/231 (46%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 485 CNCNEHSSSCHFDMAVYLATGNISGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 544
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 545 CERCTCDPAGSQNEGTCDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFG 604
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 605 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 652
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C +E G+C C+P + G +C+ + +Y
Sbjct: 653 DLDGCRPCDCDL-----GGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 698
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 116/314 (36%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 1017 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 1067
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C ++ + E G
Sbjct: 1068 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGYFGNPSEVG 1120
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + CD G+C E Q G LR RK
Sbjct: 1121 GSCQPCQCHNNIDATDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVC 1180
Query: 147 NF---------------DPAGNRIWDLR--------RCKRDTYPLGHGG----------- 172
N+ D A + L RC +T+ L G
Sbjct: 1181 NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAH 1240
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1241 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDMECRACDCDPRGI--ETPQCDQST 1298
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1299 GQCVCVEGVEGPRC 1312
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 900 PMTDVCRNIIFSISAVLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 959
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV C+ V GQC
Sbjct: 960 TFGFGPSGCKPCECHLQGSVNAF--CNPVTGQC 990
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 89/248 (35%), Gaps = 79/248 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE C D Y+ + N C CNCN S L
Sbjct: 446 GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLAT 504
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDS 120
S G C C+ G C++C +Y E C+ C C+PAGS
Sbjct: 505 GNISGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNFCERCTCDPAGSQN------- 557
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+G C+S S G +
Sbjct: 558 -EGTCDSYTDFSTGLI-------------------------------------------- 572
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G+C+CK V G+ CD C YD GCKSC CNP G++ CDS G C CK
Sbjct: 573 AGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSCACNPLGTIPGGNPCDSETGHCYCK 632
Query: 238 DNVEGAQC 245
V G C
Sbjct: 633 RLVTGQHC 640
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV C+ V
Sbjct: 929 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAF--CNPV 986
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 987 TGQCHCFQGVYARQC 1001
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 102/247 (41%), Gaps = 48/247 (19%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS+N CN G+C C GV
Sbjct: 939 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGV 996
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 997 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDPVTGECLNCQDYTMG--HNCER 1047
Query: 142 VQSRKNFDP------------------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
+ DP +G + R C +D L +
Sbjct: 1048 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQF--ARSCYQDPVTL------------QLA 1093
Query: 184 CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDN 239
C C PG G +CD C ++ + E G C+ C+C+ + CD G+C +C +
Sbjct: 1094 CVCDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCHNNIDATDPEACDKETGRCLKCLYH 1153
Query: 240 VEGAQCR 246
EG C+
Sbjct: 1154 TEGEHCQ 1160
>gi|426385629|ref|XP_004059307.1| PREDICTED: laminin subunit alpha-3-like, partial [Gorilla gorilla
gorilla]
Length = 696
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 130/311 (41%), Gaps = 71/311 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 101 CNCHGHASDCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 160
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG--------- 97
C C+C+P + + S GRC CK GD C++C + +Y+F
Sbjct: 161 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKSNFHGDNCEKCAIGYYNFPFCLRIPIFP 219
Query: 98 ----------EAGCKSCECNPAGSVKNT---------------PNCDSVKGQCESAQL-- 130
K C+CN G + P CD+ + S +
Sbjct: 220 VSTPSSEDPVAGDIKGCDCNLEGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSFPICQ 279
Query: 131 -SSRGRVHTELRVQSRKNFDPAGNRIWDL---RRCKRDTYPLGHG---------GSLNLQ 177
S + + +PA I D R + + Y L GS +
Sbjct: 280 GPSEKVAIYKPESRPSAETEPASTWILDFPASRTGEINFYCLSQPVYACWCSALGSYQMP 339
Query: 178 CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
C+S G+C+C+PGVTG +CDRC YDF S C+PAG++ +S G C+C
Sbjct: 340 CSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSACDPAGTI------NSNLGYCQC 393
Query: 237 KDNVEGAQCRS 247
K +VEG C S
Sbjct: 394 KLHVEGPTCSS 404
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 34 DGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 92
D P N+Y S + AC C+ +GS + C+S G+C+C+PGVTG +CDRC
Sbjct: 307 DFPASRTGEINFYCLSQPVY--ACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSG 364
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
YDF S C+PAG++ + K E SS ++ L + +P+G
Sbjct: 365 AYDFPHCQGSSSACDPAGTINSNLGYCQCKLHVEGPTCSSCKLLYWNLDKE-----NPSG 419
Query: 153 NRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+C + G G +C +G CQCK V GD CD C+ ++ ++
Sbjct: 420 C---SECQCHKAGTVSGTG-----ECRQGDGDCQCKSHVGGDSCDTCEDGYFALEKSNYF 471
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 472 GCQGCQCDIGGALSSV--CSGPSGVCQCREHVVGKVCQ 507
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL--QC-NSEGRCQCK 78
G+C C+ +GP C C+ Y+ +N C+ C C+ G+++ +C +G CQCK
Sbjct: 389 GYC-QCKLHVEGPTCSSCKLLYWNLDKENPSGCSECQCHKAGTVSGTGECRQGDGDCQCK 447
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
V GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+
Sbjct: 448 SHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSV--CSGPSGVCQ 496
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 446 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSVCSGPSGVCQCREHVVGKV 505
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 506 CQRPENNYY 514
>gi|390361060|ref|XP_793215.3| PREDICTED: laminin subunit alpha-2-like [Strongylocentrotus
purpuratus]
Length = 1756
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 107/199 (53%), Gaps = 21/199 (10%)
Query: 57 CNCNPIGSL-NLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
C+C +GSL C++ G C CKPGV G CDRC ++F GC++C C+ GS+
Sbjct: 620 CSCEEVGSLPQTVCSTYGGSCLCKPGVGGQNCDRCLPGFFNFTSNGCQACSCDQDGSI-- 677
Query: 115 TPNCDSVKGQC---ESAQLSSRGR---VHTELRVQS-RKNFDPAGNRIWDLRRCKR-DTY 166
T CD + GQC L + + ++LR + ++NF GN C+ +
Sbjct: 678 TQACDFITGQCPCKSGVALQDQTNHLGLTSDLRCSACQENFFNFGNP----DGCRACGCH 733
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
PLG S++LQC+ +G C C V G KCD C + ++ GC CEC+ GS+ T
Sbjct: 734 PLG---SVDLQCSEDGVCSCLDTVGGVKCDSCLPSFFNLTSEGCSPCECDMGGSL--TSE 788
Query: 227 CDSVKGQCECKDNVEGAQC 245
C++V G C CK NVEG++C
Sbjct: 789 CNNVTGVCSCKTNVEGSKC 807
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 16 LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRC 75
L ++T H G D + C C++N++ + C AC C+P+GS++LQC+ +G C
Sbjct: 696 LQDQTNHLGLTSDLR-------CSACQENFFNFGNPDGCRACGCHPLGSVDLQCSEDGVC 748
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
C V G KCD C + ++ GC CEC+ GS+ T C++V G C
Sbjct: 749 SCLDTVGGVKCDSCLPSFFNLTSEGCSPCECDMGGSL--TSECNNVTGVC 796
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 101/239 (42%), Gaps = 46/239 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCT 55
C CN ++ C YN T G C DC + G C C D ++ ++S + C
Sbjct: 199 CMCNEHADSC-----TYNETLGYGVCQDCYDNTAGDLCHICIDGFFGNASRERSDPDVCI 253
Query: 56 ACNCNPIGSL-----------NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF----GEAG 100
CNC P+G++ ++ + G+C+C+ VTG CD+C ++Y
Sbjct: 254 ECNCEPLGTVGNGTECAQFADDVTGSPIGQCECRENVTGRACDQCVDSYYGLLLEPDPGK 313
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF-DPAGNRIWDLR 159
C+ C CN G+V T +CD GQC + + T + + + F N D
Sbjct: 314 CRECGCNELGTVNATESCDQTSGQC-----FCKPNIDTRICGECKDQFYGYPTNADMDCS 368
Query: 160 RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC---------DVNHYDFGEA 208
C D GG+++L CN GRC C+ + G C DVN YD EA
Sbjct: 369 PCGCD-----PGGAISLTCNKVTGRCDCRGFIEGRTCTSVENGYYYPYLDVNRYDAWEA 422
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 101/218 (46%), Gaps = 35/218 (16%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
+GG CL C+ G NC++C ++ + N C AC+C+ GS+ C+ G+C CK G
Sbjct: 636 YGGSCL-CKPGVGGQNCDRCLPGFFNFTS-NGCQACSCDQDGSITQACDFITGQCPCKSG 693
Query: 81 V-----------TGD-KCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCES 127
V T D +C C N ++FG GC++C C+P GSV C S G C
Sbjct: 694 VALQDQTNHLGLTSDLRCSACQENFFNFGNPDGCRACGCHPLGSVD--LQC-SEDGVCSC 750
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQC 186
L + G V + + S N G C+ D GGSL +CN+ G C C
Sbjct: 751 --LDTVGGVKCDSCLPSFFNLTSEG-----CSPCECD-----MGGSLTSECNNVTGVCSC 798
Query: 187 KPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSV 221
K V G KCDRC ++ + GC+ C C GS
Sbjct: 799 KTNVEGSKCDRCRPEFFNLDNSNPNGCQPCFCYGHGST 836
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF----GEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G+C+C+ VTG CD+C ++Y C+ C CN G+V T +CD GQC CK
Sbjct: 282 GQCECRENVTGRACDQCVDSYYGLLLEPDPGKCRECGCNELGTVNATESCDQTSGQCFCK 341
Query: 238 DNVEGAQC 245
N++ C
Sbjct: 342 PNIDTRIC 349
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLN-LQC-NSEGRCQC 77
G C C P C +C +YY D F C+ACNCN G+ + QC N G+C C
Sbjct: 1091 GAFCESCAASVLEPGCNQCIPDYYGFGTDLFDGACSACNCNTTGTGDATQCDNQSGQCPC 1150
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
CD C N+Y++ E+GC C+
Sbjct: 1151 VGNFGEQGCDGCAYNYYNY-ESGCLKCDV 1178
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+ G+C CKP + C C Y + + C C C+P G++ T C+ V G+C+C
Sbjct: 334 TSGQCFCKPNIDTRICGECKDQFYGYPTNADMDCSPCGCDPGGAISLT--CNKVTGRCDC 391
Query: 237 KDNVEGAQCRS 247
+ +EG C S
Sbjct: 392 RGFIEGRTCTS 402
>gi|340709274|ref|XP_003393236.1| PREDICTED: laminin subunit alpha-1-like [Bombus terrestris]
Length = 3145
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 116/281 (41%), Gaps = 87/281 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP--- 79
G CL+C+G+ +G C+KC+ +Y + C CNC+P+G+ +++C+ + G+C CKP
Sbjct: 809 GRCLECRGNTEGWKCDKCKPAHYGNPLEQNCLPCNCDPLGTSSIECDEKSGQCPCKPLFE 868
Query: 80 -------------------------------------------GVTGDKCDRCDVNHYDF 96
GV G +CD CD++HY
Sbjct: 869 GRDCSSCIEGYGNVTAGCRECDCDVGALDEICDPVTGECRCTEGVLGFRCDHCDIDHYGL 928
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
GCK C CNP GS+ T CD V GQC+ ++ R D
Sbjct: 929 STEGCKGCRCNPIGSI--TTACDIVTGQCQCKPHVTGR-------------QCDQCMIGF 973
Query: 156 WDLRRCKRDTYPLGHG---------GSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDF 205
W L P G G G+ N C +S G+C CKPGV G +CD C +Y +
Sbjct: 974 WGL--------PTGAGCAPCGCDPIGAYNSSCHDSIGQCYCKPGVGGTRCDVCLPGYYGY 1025
Query: 206 GEAGCKSCE-CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C+ C G V CD G+C C G C
Sbjct: 1026 SSNGCQVCDSCVRPGHV-----CDPDTGRCVCPTLTFGEHC 1061
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 110/246 (44%), Gaps = 27/246 (10%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG 63
N FS C D +G+ C C G +CE C ++ G+ C P
Sbjct: 744 NNFSPNCQLDDPTDIDSGYV--CTQCPKGYTGDHCESCDIGFF---GNPLIPGGTCEPCF 798
Query: 64 SLNLQCNSE-GRC-QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDS 120
C+ E GRC +C+ G KCD+C HY + E C C C+P G+ ++ CD
Sbjct: 799 CGGGPCDQETGRCLECRGNTEGWKCDKCKPAHYGNPLEQNCLPCNCDPLGT--SSIECDE 856
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
GQC L GR + GN R C D G+L+ C+
Sbjct: 857 KSGQCPCKPLF-EGR-------DCSSCIEGYGNVTAGCRECDCDV------GALDEICDP 902
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C+C GV G +CD CD++HY GCK C CNP GS+ T CD V GQC+CK +
Sbjct: 903 VTGECRCTEGVLGFRCDHCDIDHYGLSTEGCKGCRCNPIGSI--TTACDIVTGQCQCKPH 960
Query: 240 VEGAQC 245
V G QC
Sbjct: 961 VTGRQC 966
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 106/231 (45%), Gaps = 43/231 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCD 87
C+ G C++C ++ C C C+PIG+ N C +S G+C CKPGV G +CD
Sbjct: 957 CKPHVTGRQCDQCMIGFWGLPTGAGCAPCGCDPIGAYNSSCHDSIGQCYCKPGVGGTRCD 1016
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
C +Y + GC+ C+ C G V CD G+C L+
Sbjct: 1017 VCLPGYYGYSSNGCQVCDSCVRPGHV-----CDPDTGRCVCPTLTFGEHCD--------- 1062
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHG----------GSLNLQCNSEGRCQCKPGVTGDKCD 196
RC+ ++ L G GS+ QC+ +G+C C+ G G +C+
Sbjct: 1063 -------------RCRSGSWDLVPGVGCRPCACTLGSMKPQCDHQGQCPCRIGYDGLRCE 1109
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVK-NTPNCD-SVKGQCECKDNVEGAQC 245
+C +Y G C+ C CN AG+++ + CD + KGQC CK+ V G QC
Sbjct: 1110 KCAKGYY--GYPRCRPCSCNVAGTLQCDDETCDCNDKGQCPCKEYVVGRQC 1158
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S+ C + GHCL+C+ + GP C+ C D++Y D C C C
Sbjct: 1441 CQCNGRSDICDIET---------GHCLNCRENTAGPRCDICTDSFYGHP-DYGCKPCPCP 1490
Query: 61 PI-----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
+ + N+E C CKPG TG KC+RC +Y F C C CNPAGS+
Sbjct: 1491 QADKRFSNTCMVLANTEAICVCKPGYTGRKCERCSSGYYGFPHLPGGKCIPCNCNPAGSL 1550
Query: 113 KNTPNCDSVKGQC 125
+ CD+ GQC
Sbjct: 1551 ND--ECDTETGQC 1561
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKG 232
+ N+E C CKPG TG KC+RC +Y F C C CNPAGS+ + CD+ G
Sbjct: 1502 VLANTEAICVCKPGYTGRKCERCSSGYYGFPHLPGGKCIPCNCNPAGSLND--ECDTETG 1559
Query: 233 QCECKDNVEGAQC 245
QC C+ G C
Sbjct: 1560 QCRCRAGSTGRDC 1572
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 29 CQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGD 84
C+ G CE+C YY G C CNCNP GSLN +C++E G+C+C+ G TG
Sbjct: 1512 CKPGYTGRKCERCSSGYYGFPHLPGGK-CIPCNCNPAGSLNDECDTETGQCRCRAGSTGR 1570
Query: 85 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C + + C SC N G + +T
Sbjct: 1571 DCSECTAYRHVYINNVCTSCNDNCTGILLDT 1601
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C+G + RC + + HG H G NCEKC+ NYY+ +G C
Sbjct: 285 CVCSGHAARCRYSVQ------HGEHT-------AGINCEKCQVNYYRPNGVAPDDPEPCV 331
Query: 56 ACNCNPIGSLNL---------QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C+CN GS G C CKPG +G KCD+C + F + C C C
Sbjct: 332 PCDCNVHGSTGYCTPDDSYVHIGKVAGACDCKPGYSGYKCDQCAAGYRQFPD--CMPCPC 389
Query: 107 NPAGSV 112
+ G +
Sbjct: 390 DSRGIL 395
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 182 GRC-QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
GRC +C+ G KCD+C HY + E C C C+P G+ ++ CD GQC CK
Sbjct: 809 GRCLECRGNTEGWKCDKCKPAHYGNPLEQNCLPCNCDPLGT--SSIECDEKSGQCPCKPL 866
Query: 240 VEGAQCRS 247
EG C S
Sbjct: 867 FEGRDCSS 874
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-----NLQCNSEGRCQ 76
H G C C+ DG CEKC YY G C C+CN G+L CN +G+C
Sbjct: 1093 HQGQC-PCRIGYDGLRCEKCAKGYY---GYPRCRPCSCNVAGTLQCDDETCDCNDKGQCP 1148
Query: 77 CKPGVTGDKCDRCDVNHYDFG---EAGCKSCEC 106
CK V G +C +C + GC C C
Sbjct: 1149 CKEYVVGRQCSQCKEGTFGLALDNPKGCTECFC 1181
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG +G KCD+C + F + C C C+ G + P+ D +G C CK NV
Sbjct: 358 GACDCKPGYSGYKCDQCAAGYRQFPD--CMPCPCDSRGIL---PSHDC-EGDCLCKANVA 411
Query: 242 GAQC 245
G C
Sbjct: 412 GELC 415
>gi|156549170|ref|XP_001607740.1| PREDICTED: laminin subunit beta-1-like [Nasonia vitripennis]
Length = 1804
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 112/265 (42%), Gaps = 80/265 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG S C FD+ +Y R+G GG C DCQ + G NCE C+ +Y S +
Sbjct: 366 CNCNGHSTSCHFDEAVYERSGRVSGGVCDDCQHNTRGQNCELCKPFFYHDSSKDITDPEA 425
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCD---VNHYDFGEAG 100
C C+C+P GSL+ L + GRC CK V G +CDRC N D G
Sbjct: 426 CQPCDCDPRGSLDEGICDSRTDPLSGDESGRCHCKANVEGRRCDRCQNGFWNFTDLNPEG 485
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C CN G++ N C+ V G+C
Sbjct: 486 CQACTCNTQGTINNQ-GCNMVTGEC----------------------------------T 510
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
CKR Y +G CN QC P G D + GCK C+C+ G+
Sbjct: 511 CKR--YVVGR------DCN-----QCLPEYWGLSDD----------QEGCKPCDCDLGGA 547
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
N+ CD+ GQC C+ +V G C
Sbjct: 548 YNNS--CDAYTGQCHCRPHVSGRSC 570
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 108/286 (37%), Gaps = 84/286 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G C C+ G NC++C + +Y
Sbjct: 899 CECNGHADSC---------DSKTGACQSCRDSTTGHNCDRCIEAFYGDPRIGVDIPCRPC 949
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-- 99
+SG + +C+ +P+ + + C+C G G +CD C N Y E
Sbjct: 950 PCPGTLESGHAYADSCSLDPV-------SHDVICECYQGYAGPRCDTCADNFYGNPETPG 1002
Query: 100 -GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
C+SCEC+ + NCD G+C ++ G ++
Sbjct: 1003 GKCQSCECSNNTDLNRPGNCDPQTGKCLQCLWNTDG---------------------FNC 1041
Query: 159 RRCKRDTYPLGHGGSLNLQCNS------------------EGRCQCKPGVTGDKCDRCDV 200
+ CK D Y G +L C S G+C C P V G CD C+
Sbjct: 1042 QVCKADFY----GDALQQNCQSCQCNILGTDAKAGPCDHRTGQCPCLPHVIGQLCDTCEE 1097
Query: 201 NHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
NH+ GC CEC+ GSV + C+ +G CECK G +C
Sbjct: 1098 NHWRIASGEGCDPCECDVVGSVSD--RCNPYEGTCECKPGFGGRRC 1141
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCKPG 80
G CL C + DG NC+ C+ ++Y + C +C CN +G+ + G+C C P
Sbjct: 1027 GKCLQCLWNTDGFNCQVCKADFYGDALQQNCQSCQCNILGTDAKAGPCDHRTGQCPCLPH 1086
Query: 81 VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G CD C+ NH+ GC CEC+ GSV + C+ +G CE R +
Sbjct: 1087 VIGQLCDTCEENHWRIASGEGCDPCECDVVGSVSD--RCNPYEGTCECKPGFGGRRCN-- 1142
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
+ + N+ GN C+ D GS + QC+ E G C C G+ G+KCD+C
Sbjct: 1143 ---ECQANY--WGNPNVQCYPCECDVI-----GSASAQCDRETGVCVCHEGIGGEKCDQC 1192
Query: 199 DVNH 202
D ++
Sbjct: 1193 DRSY 1196
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 35 GPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-QCKPGVTGDKCDR 88
GP C+ C DN+Y ++ C +C C+ LN N G+C QC G C
Sbjct: 984 GPRCDTCADNFYGNPETPGGKCQSCECSNNTDLNRPGNCDPQTGKCLQCLWNTDGFNCQV 1043
Query: 89 CDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV-----HTELRV 142
C + Y D + C+SC+CN G+ CD GQC G++ R+
Sbjct: 1044 CKADFYGDALQQNCQSCQCNILGTDAKAGPCDHRTGQCPCLP-HVIGQLCDTCEENHWRI 1102
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
S + DP C+ D GS++ +CN EG C+CKPG G +C+ C N
Sbjct: 1103 ASGEGCDP----------CECDVV-----GSVSDRCNPYEGTCECKPGFGGRRCNECQAN 1147
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ C CEC+ GS + CD G C C + + G +C
Sbjct: 1148 YWGNPNVQCYPCECDVIGSA--SAQCDRETGVCVCHEGIGGEKC 1189
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 22/237 (9%)
Query: 20 TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCK 78
+ +GG+C C+ + G +C+ C Y G C C+C+ +G+L+ C++E GRC+C+
Sbjct: 818 SNYGGNC-QCKPNVVGRSCDHCAPGTY-GFGPEGCVPCDCDGVGALDNFCDAETGRCKCR 875
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
P G C +C+ ++F C+ CECN + +CDS G C+S + S+ G H
Sbjct: 876 PNTYGRSCGQCEPGFWNFPH--CRRCECN-----GHADSCDSKTGACQSCRDSTTG--HN 926
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLGHGG----SLNLQCNSEGRCQCKPGVTGD 193
R DP R C T GH SL+ + + C+C G G
Sbjct: 927 CDRCIEAFYGDPRIGVDIPCRPCPCPGTLESGHAYADSCSLD-PVSHDVICECYQGYAGP 985
Query: 194 KCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C N Y E C+SCEC+ + NCD G+C +C N +G C+
Sbjct: 986 RCDTCADNFYGNPETPGGKCQSCECSNNTDLNRPGNCDPQTGKCLQCLWNTDGFNCQ 1042
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 56 ACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+C CNP GS +L C N G CQCKP V G CD C Y FG GC C+C+ G++ N
Sbjct: 804 SCECNPTGSHSLICSNYGGNCQCKPNVVGRSCDHCAPGTYGFGPEGCVPCDCDGVGALDN 863
Query: 115 TPNCDSVKGQCE 126
CD+ G+C+
Sbjct: 864 F--CDAETGRCK 873
>gi|338710664|ref|XP_001503271.3| PREDICTED: laminin subunit alpha-2 [Equus caballus]
Length = 3129
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 119/269 (44%), Gaps = 67/269 (24%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C + RTG +C+ + G C++C+ + C CNC
Sbjct: 927 CNVNGSFSEIC------HTRTGQ----CECKPNVQGRRCDECKPKTFGVRSGRGCVPCNC 976
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCD C +++F E GC +C+C+ G+ NCD
Sbjct: 977 NSFGSKSFDCEENGQCWCQPGVTGKKCDHCAHGYFNFQEGGCTACDCSHLGN-----NCD 1031
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
GQC P +C +T+ GH
Sbjct: 1032 PKTGQC----------------------ICPPNTIGEKCSKCAPNTW--GHSITTGCKAC 1067
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G+C+C+P +G +C C+ H++F C +C C G+ +T
Sbjct: 1068 NCSTVGSLDFQCNINTGQCKCRPKFSGTRCTECNRGHWNFPH--CTACACFLPGTDGST- 1124
Query: 226 NCDS---------VKGQCECKDNVEGAQC 245
CDS GQC CK NVEG C
Sbjct: 1125 -CDSETRRCSCVDQTGQCTCKVNVEGVHC 1152
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 107/265 (40%), Gaps = 62/265 (23%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 823 NNFSPTCHLDRSL------GLICDKCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 876
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGS 111
NL + G C CKPG TG C+ C ++ G C+ C CN GS
Sbjct: 877 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFGDAVGAKNCQPCGCNVNGS 932
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
C + GQCE VQ R+ CK T+ + G
Sbjct: 933 FSEI--CHTRTGQCECKP-----------NVQGRR-----------CDECKPKTFGVRSG 968
Query: 172 -----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
GS + C G+C C+PGVTG KCD C +++F E GC +C+C+ G+
Sbjct: 969 RGCVPCNCNSFGSKSFDCEENGQCWCQPGVTGKKCDHCAHGYFNFQEGGCTACDCSHLGN 1028
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
NCD GQC C N G +C
Sbjct: 1029 -----NCDPKTGQCICPPNTIGEKC 1048
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 351 CNCHGKAEECYYDENVARRNLSLNIHGKYVGGGVCINCTRNTAGINCETCVDGFFRPKGV 410
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+P+GSLN C + G C CKPG G CDRC + F
Sbjct: 411 SPNYPRPCQPCHCDPVGSLNEVCVKDEKHARRGLAPGSCHCKPGFRGVSCDRCARGY--F 468
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK C C+ AGS P
Sbjct: 469 GYPDCKPCNCSGAGSTNEDP 488
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CKPG G CDRC + FG CK C C+ AGS N D G C CK+N
Sbjct: 445 APGSCHCKPGFRGVSCDRCARGY--FGYPDCKPCNCSGAGST----NEDPCFGPCTCKEN 498
Query: 240 VEGAQC 245
VEG C
Sbjct: 499 VEGGDC 504
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1501 CSACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPHGSLPVPCDPVTGLCTCRPGAT 1560
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1561 GRKCDGCKHWH 1571
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K + C C
Sbjct: 1427 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCAVGYYGIVKGLPSDCQRCA 1477
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1478 CPLISSSNNFSPSCVMEGLNDYRCSACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1537
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1538 PHGSLPVP--CDPVTGLC 1553
>gi|354465114|ref|XP_003495025.1| PREDICTED: LOW QUALITY PROTEIN: usherin-like [Cricetulus griseus]
Length = 5192
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 126/265 (47%), Gaps = 33/265 (12%)
Query: 1 CNCNGFSNRCFFDKE-----LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--- 52
C CN + C +D L + G GG C +CQ G NCE C+D +Y+ G +
Sbjct: 571 CQCNNHARSCHYDASVDPFPLEHSRGGGGVCDNCQHHTTGRNCESCQDYFYRPIGADPSA 630
Query: 53 --FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C C+CN G+ N L C+ G +C CK V+G +C RC YD GC+ C
Sbjct: 631 LDVCKPCDCNRAGTRNGDLLCDPIGGQCDCKRHVSGRQCLRCQDGFYDLQALDPDGCRPC 690
Query: 105 ECNPAGSVKNTPNCDSVKGQ--CESAQLSSR-GRVHTELRVQSRKNFDPAGNRIWDLRRC 161
CNP+G+V C GQ C++ + R R + + N D + C
Sbjct: 691 NCNPSGTVDGDITCHQNSGQCLCKANVIGLRCNRCNFGFKFLQSFNDD-------GCQPC 743
Query: 162 KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
+ + + GS+N CN G+C+CK G KCD C + Y + CK+C+C+ AGS
Sbjct: 744 QCNPH-----GSVNQLCNPLSGQCECKKEAKGLKCDTCREDFYGLAGSACKACDCSLAGS 798
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK NV G QC
Sbjct: 799 QAGT-TCDAETGQCVCKSNVGGRQC 822
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 109/246 (44%), Gaps = 48/246 (19%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCNS-EGRCQC 77
GG C DC+ G C +C+D +Y Q + C CNCNP G+++ + C+ G+C C
Sbjct: 655 GGQC-DCKRHVSGRQCLRCQDGFYDLQALDPDGCRPCNCNPSGTVDGDITCHQNSGQCLC 713
Query: 78 KPGVTGDKCDRCDVNH---YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G +C+RC+ F + GC+ C+CNP GSV C+ + GQCE + +
Sbjct: 714 KANVIGLRCNRCNFGFKFLQSFNDDGCQPCQCNPHGSVNQL--CNPLSGQCECKKEAKGL 771
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-----------HGGSLNLQCNSE-G 182
+ T C+ D Y L G C++E G
Sbjct: 772 KCDT----------------------CREDFYGLAGSACKACDCSLAGSQAGTTCDAETG 809
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+C CK V G +C++C ++ + C C C G+V + CD GQC CK
Sbjct: 810 QCVCKSNVGGRQCNQCLEGYFSLQQKDSFLCLPCNCEKTGTVHGSLLCDKSTGQCLCKSG 869
Query: 240 VEGAQC 245
V G +C
Sbjct: 870 VTGLRC 875
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 119/250 (47%), Gaps = 58/250 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C + Y+ Q+ C CNC G+++ L C+ S G+C CK
Sbjct: 809 GQCV-CKSNVGGRQCNQCLEGYFSLQQKDSFLCLPCNCEKTGTVHGSLLCDKSTGQCLCK 867
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +CD+C + ++ GC+ CEC+ G++ + CD V GQC
Sbjct: 868 SGVTGLRCDQCAPHRFNLTMGNLQGCQVCECDSLGTLPGS-ICDPVSGQCPC-------- 918
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPLGHG-----------GSLNLQCN 179
+ R+ RRC++ T P GH G+++ CN
Sbjct: 919 ------LPHRQG-----------RRCEQCQPGFYTSP-GHATGCLPCLCHTVGAMSHICN 960
Query: 180 -SEGRCQCK-PGVTGDKCDRCDVNHYDF-GEAG-CKSCECNPAGSVKNTPNCDSVKGQCE 235
G+C+C+ P TG C +C ++ F E G C+ C C+ AG++ T CD V GQC
Sbjct: 961 GVTGQCRCRDPSTTGQSCYQCQDGYFRFDPETGRCQPCHCHLAGALNET--CDVVTGQCF 1018
Query: 236 CKDNVEGAQC 245
CK V G++C
Sbjct: 1019 CKQFVTGSKC 1028
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 82/192 (42%), Gaps = 39/192 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQC--NSEGRCQCKP 79
G CL C+ G C++C + + + N C C C+ +G+L G+C C P
Sbjct: 862 GQCL-CKSGVTGLRCDQCAPHRFNLTMGNLQGCQVCECDSLGTLPGSICDPVSGQCPCLP 920
Query: 80 GVTGDKCDRCDVNHYDF-GEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
G +C++C Y G A GC C C+ G++ + C+ V GQC S+ G
Sbjct: 921 HRQGRRCEQCQPGFYTSPGHATGCLPCLCHTVGAMSHI--CNGVTGQCRCRDPSTTG--- 975
Query: 138 TELRVQS-------RKNFDPAGNRIWDLRRCKRDTYPLGH---GGSLNLQCNS-EGRCQC 186
QS FDP + RC+ H G+LN C+ G+C C
Sbjct: 976 -----QSCYQCQDGYFRFDP------ETGRCQP-----CHCHLAGALNETCDVVTGQCFC 1019
Query: 187 KPGVTGDKCDRC 198
K VTG KCD C
Sbjct: 1020 KQFVTGSKCDMC 1031
>gi|1661108|gb|AAB18388.1| laminin alpha 2 chain [Homo sapiens]
Length = 3110
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECSRGHWNYPR--CNLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C H+++ C C+C G+ T CDS +C
Sbjct: 1087 GAKCTECSRGHWNYPR--CNLCDCFLPGTDATT--CDSETKKC 1125
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 105/268 (39%), Gaps = 66/268 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F +E G C CQ G C++C Y+ Q+ G CTAC
Sbjct: 967 CNCNSFGSKSFDCEE-------SGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACE 1015
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + GRC C P G+KC +C N + GCK+C C+ GS+
Sbjct: 1016 CSHLGN---NCDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDF-- 1070
Query: 117 NCDSVKGQC------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLG 169
C+ GQC A+ + R H W+ RC D + G
Sbjct: 1071 QCNVNTGQCNCHPKFSGAKCTECSRGH------------------WNYPRCNLCDCFLPG 1112
Query: 170 HGGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECN 216
+ C+SE G+C CK V G CDRC + GC SC C
Sbjct: 1113 TDAT---TCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYC- 1168
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
T C KG ++ Q
Sbjct: 1169 ----FGTTTQCSEAKGLIRTWVTLKAEQ 1192
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G+ C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 28/140 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCE 105
C I S N C +EG RC C G G C+RC + G G C+ CE
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYT--GSPGNPGGSCQECE 1528
Query: 106 CNPAGSVKNTPNCDSVKGQC 125
C+P GS+ CD V G C
Sbjct: 1529 CDPYGSLPVP--CDPVTGFC 1546
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|438056|emb|CAA81394.1| laminin M chain (merosin) [Homo sapiens]
Length = 3110
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECSRGHWNYPR--CNLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C H+++ C C+C G+ T CDS +C
Sbjct: 1087 GAKCTECSRGHWNYPR--CNLCDCFLPGTDATT--CDSETKKC 1125
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 105/268 (39%), Gaps = 66/268 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F +E G C CQ G C++C Y+ Q+ G CTAC
Sbjct: 967 CNCNSFGSKSFDCEE-------SGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACE 1015
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + GRC C P G+KC +C N + GCK+C C+ GS+
Sbjct: 1016 CSHLGN---NCDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDF-- 1070
Query: 117 NCDSVKGQC------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLG 169
C+ GQC A+ + R H W+ RC D + G
Sbjct: 1071 QCNVNTGQCNCHPKFSGAKCTECSRGH------------------WNYPRCNLCDCFLPG 1112
Query: 170 HGGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECN 216
+ C+SE G+C CK V G CDRC + GC SC C
Sbjct: 1113 TDAT---TCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYC- 1168
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
T C KG ++ Q
Sbjct: 1169 ----FGTTTQCSEAKGLIRTWVTLKAEQ 1192
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G+ C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 28/140 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCE 105
C I S N C +EG RC C G G C+RC + G G C+ CE
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYT--GSPGNPGGSCQECE 1528
Query: 106 CNPAGSVKNTPNCDSVKGQC 125
C+P GS+ CD V G C
Sbjct: 1529 CDPYGSLPVP--CDPVTGFC 1546
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|260798757|ref|XP_002594366.1| hypothetical protein BRAFLDRAFT_277633 [Branchiostoma floridae]
gi|229279600|gb|EEN50377.1| hypothetical protein BRAFLDRAFT_277633 [Branchiostoma floridae]
Length = 1771
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 111/226 (49%), Gaps = 36/226 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
CNCN SN+C FD +Y +TG GG C DCQ + G NCE+C+ YYQ N
Sbjct: 323 CNCNSHSNKCHFDPAVYEQTGRVSGGVCDDCQHNTMGRNCEECKPFYYQDPNKDIRDPNI 382
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C C+C+P G++N +C S GRC CK V G++CDRC +++ G
Sbjct: 383 CLPCDCDPDGAVNGGECESRTDPANNLVAGRCICKRNVDGERCDRCRGGYWNMRADNPEG 442
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C+CNP G+ ++ CD G C R + KN D + L
Sbjct: 443 CEACQCNPIGTSRDQ-TCDPRTGDCICK------------RHVTGKNCDSCVPGFFGLSD 489
Query: 161 CKRDTYP--LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
+ P GG+++ QCN +G+C+C+P +TG +CD Y
Sbjct: 490 IEEGCRPCDCDPGGAIDSQCNQLDGQCKCRPHMTGRRCDEVQPGFY 535
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 27/188 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-----------SE 72
G CL C + +GP C++C+ YY + D C C CN +G+ + +
Sbjct: 977 GECLKCLYNTEGPRCDRCQAGYYGTAKDQDCKRCVCNMLGTDRTRARCQDGGLCECDRAT 1036
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G +CDRC +++ GC++C C+P S+ + C+ GQC +
Sbjct: 1037 GQCPCLPNVVGQQCDRCAPDYWKIASGRGCEACSCDPVNSL--STQCNEFDGQCR-CKPG 1093
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR T+ N+ G+ C D PLG S LQC+ + G+C+C+PGV
Sbjct: 1094 FGGRTCTDCET----NY--WGDPRSQCSECNCD--PLG---SETLQCDRNTGQCRCRPGV 1142
Query: 191 TGDKCDRC 198
TG KCD+C
Sbjct: 1143 TGMKCDQC 1150
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 110/274 (40%), Gaps = 50/274 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCT 55
CNCNG ++RC G C+DC+ + G C+ C+D YY Q G C
Sbjct: 847 CNCNGHADRC---------DSVTGSCIDCRDNTAGQFCQTCKDGYYGDPRLQPGGSQPCR 897
Query: 56 ACNCNPIG-----SLNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHYDFGEA---GCK 102
C C P G +C + R C C G TG +CD C Y E C+
Sbjct: 898 ECMC-PGGISSGRQFADRCYQDPRSQAVICNCNEGYTGPRCDSCAPGFYGNPEVPGGSCR 956
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQLSSRG----RVHTELRVQSRKNFDPAGNRIWDL 158
CECN + ++ CDS G+C ++ G R ++ D
Sbjct: 957 RCECNNNIDMTDSSACDSRTGECLKCLYNTEGPRCDRCQAGYYGTAKDQ---------DC 1007
Query: 159 RRC------KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
+RC T G L + G+C C P V G +CDRC +++ GC+
Sbjct: 1008 KRCVCNMLGTDRTRARCQDGGLCECDRATGQCPCLPNVVGQQCDRCAPDYWKIASGRGCE 1067
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C+P S+ + C+ GQC CK G C
Sbjct: 1068 ACSCDPVNSL--STQCNEFDGQCRCKPGFGGRTC 1099
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 38/216 (17%)
Query: 50 GDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
G C AC+C+ GS +L CN S G+C C PG G +C+RC N ++F C+ C CN
Sbjct: 794 GPQGCRACDCDASGSRDLFCNPSNGQCLCNPGAYGRRCNRCQDNFWNF--PNCQRCNCN- 850
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRV--------HTELRVQSRKNFDPAGNRIWDLRR 160
+ CDSV G C + ++ G+ + + R+Q P G+ +
Sbjct: 851 ----GHADRCDSVTGSCIDCRDNTAGQFCQTCKDGYYGDPRLQ------PGGS-----QP 895
Query: 161 CKRDTYP--LGHGGSLNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHYDFGEA---GC 210
C+ P + G +C + R C C G TG +CD C Y E C
Sbjct: 896 CRECMCPGGISSGRQFADRCYQDPRSQAVICNCNEGYTGPRCDSCAPGFYGNPEVPGGSC 955
Query: 211 KSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+ CECN + ++ CDS G+C +C N EG +C
Sbjct: 956 RRCECNNNIDMTDSSACDSRTGECLKCLYNTEGPRC 991
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 100/263 (38%), Gaps = 49/263 (18%)
Query: 6 FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIG 63
F++RC+ D +C GP C+ C +Y + C C CN
Sbjct: 911 FADRCYQDPR------SQAVICNCNEGYTGPRCDSCAPGFYGNPEVPGGSCRRCECNN-- 962
Query: 64 SLNLQCNSEGRCQCKPG--------VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKN 114
N+ C + G G +CDRC +Y + CK C CN G+ +
Sbjct: 963 --NIDMTDSSACDSRTGECLKCLYNTEGPRCDRCQAGYYGTAKDQDCKRCVCNMLGTDRT 1020
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG--- 171
C G CE + + + + Q RC D + + G
Sbjct: 1021 RARCQD-GGLCECDRATGQCPCLPNVVGQQ-------------CDRCAPDYWKIASGRGC 1066
Query: 172 --------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
SL+ QCN +G+C+CKPG G C C+ N++ + C C C+P GS
Sbjct: 1067 EACSCDPVNSLSTQCNEFDGQCRCKPGFGGRTCTDCETNYWGDPRSQCSECNCDPLGS-- 1124
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD GQC C+ V G +C
Sbjct: 1125 ETLQCDRNTGQCRCRPGVTGMKC 1147
>gi|327281902|ref|XP_003225684.1| PREDICTED: laminin subunit alpha-2-like [Anolis carolinensis]
Length = 3160
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 117/267 (43%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C G C DC+ + G C+KC+ + C CNC
Sbjct: 948 CNVNGSFSLTC---------NSKTGQC-DCKPNIVGRLCDKCKPGTFGVQSSRGCVPCNC 997
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C+ G+C C+PGV G KCDRC Y F E GC CEC+ G+ NCD
Sbjct: 998 NSFGSKSFDCDETGQCHCQPGVGGKKCDRCAHGFYGFEEGGCTPCECSHLGN-----NCD 1052
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH--------- 170
G+C + G R +C + + GH
Sbjct: 1053 PFTGRCICPP-------------------NTVGQRC---EKCAPNHW--GHDIISGCKAC 1088
Query: 171 ----GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G C C+P +GDKC C + + ++ + C +CEC AG+ +T
Sbjct: 1089 ECSTAGSLSFQCNPDTGCCFCRPEFSGDKCTECRLGYRNYPQ--CIACECMVAGTEPHTC 1146
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
N + K GQC CK NVEG C
Sbjct: 1147 NSEMEKCSCSDHSGQCTCKMNVEGVYC 1173
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 106/234 (45%), Gaps = 39/234 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G CL C+ G CEKC D Y+ + D C C+CN GS +L CNS+ G+C CKP +
Sbjct: 912 GACLICKPGTTGQYCEKCADGYFGDALDVKNCQPCSCNVNGSFSLTCNSKTGQCDCKPNI 971
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G CD+C + + GC C CN GS + +CD GQC H +
Sbjct: 972 VGRLCDKCKPGTFGVQSSRGCVPCNCNSFGS--KSFDCDET-GQC-----------HCQP 1017
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS--------EGRCQCKPGVTG 192
V +K RC Y GG +C+ GRC C P G
Sbjct: 1018 GVGGKK-----------CDRCAHGFYGFEEGGCTPCECSHLGNNCDPFTGRCICPPNTVG 1066
Query: 193 DKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C++C NH+ +GCK+CEC+ AGS+ N D+ G C C+ G +C
Sbjct: 1067 QRCEKCAPNHWGHDIISGCKACECSTAGSLSFQCNPDT--GCCFCRPEFSGDKC 1118
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 113/261 (43%), Gaps = 54/261 (20%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNCNP 61
N FS C D+ G C +C G CE+C + Y+ + C C CN
Sbjct: 844 NNFSPTCHLDR------SRGLICDECPPGYVGSRCERCAEGYFGQPLIPGGSCQPCRCND 897
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C++C + FG+A C+ C CN
Sbjct: 898 ----NLDFSIPGSCDSLSGACLICKPGTTGQYCEKCADGY--FGDALDVKNCQPCSCNVN 951
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRV-----HTELRVQSRKNFDPAGNRIWDLRRCKRD 164
GS T C+S GQC+ + + GR+ VQS + P C +
Sbjct: 952 GSFSLT--CNSKTGQCD-CKPNIVGRLCDKCKPGTFGVQSSRGCVP----------CNCN 998
Query: 165 TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
++ GS + C+ G+C C+PGV G KCDRC Y F E GC CEC+ G+
Sbjct: 999 SF-----GSKSFDCDETGQCHCQPGVGGKKCDRCAHGFYGFEEGGCTPCECSHLGN---- 1049
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
NCD G+C C N G +C
Sbjct: 1050 -NCDPFTGRCICPPNTVGQRC 1069
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + CF+++ + ++ GG C++C + G NCE C D Y+++ G
Sbjct: 346 CNCHGKAEECFYNQTVADKKQSLNIHGEYVGGGVCINCTQNTAGINCETCIDGYFRQKGV 405
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
N C CNC IGSL+ C + G C CKPG G++C+RC + + F
Sbjct: 406 LPGDRNPCRPCNCYSIGSLDGTCVKDEKHASGDLLPGFCHCKPGFGGERCNRCALGYKGF 465
Query: 97 GEAGCKSCECNPAGSVKNTP 116
C C C+ GS+ + P
Sbjct: 466 PH--CLPCNCSLKGSLNDDP 483
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 36/242 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCN---PIGSLNLQCN---SEGR 74
G CLDC+ + G C+KC +Y K + C C C P + + C+ S G
Sbjct: 799 GECLDCKHNTGGLYCDKCLPGFYGDATKGKPDDCQLCACPLSIPSNNFSPTCHLDRSRGL 858
Query: 75 C--QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C PG G +C+RC + FG+ C+ C CN +CDS+ G C
Sbjct: 859 ICDECPPGYVGSRCERCAEGY--FGQPLIPGGSCQPCRCNDNLDFSIPGSCDSLSGACLI 916
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG--HGGSLNLQCNSE-GRC 184
+ + G+ K D D++ C+ P GS +L CNS+ G+C
Sbjct: 917 CKPGTTGQY-------CEKCADGYFGDALDVKNCQ----PCSCNVNGSFSLTCNSKTGQC 965
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
CKP + G CD+C + + GC C CN GS + +CD GQC C+ V G
Sbjct: 966 DCKPNIVGRLCDKCKPGTFGVQSSRGCVPCNCNSFGS--KSFDCDET-GQCHCQPGVGGK 1022
Query: 244 QC 245
+C
Sbjct: 1023 KC 1024
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGH-CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTAC 57
+ N FS C + G G + C C +G CE+C Y + C C
Sbjct: 1503 VSSNNFSPSCVIE-------GVGDYRCTACPPGYEGQYCERCSSGYTGNPRIPGGSCQEC 1555
Query: 58 NCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA 99
C+P GSL + C+ G+C CKPG TG KC C+ H G A
Sbjct: 1556 ECHPYGSLPVPCDPVTGQCTCKPGSTGLKCAGCEPRHAREGIA 1598
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C PG G C+RC + C+ CEC+P GS+ CD V GQC CK G
Sbjct: 1525 CPPGYEGQYCERCSSGYTGNPRIPGGSCQECECHPYGSLPVP--CDPVTGQCTCKPGSTG 1582
Query: 243 AQC 245
+C
Sbjct: 1583 LKC 1585
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN---LQCNSEG----RCQ 76
C +C+ + G +CE+C +Y + N C C C S N C EG RC
Sbjct: 1464 CQNCRHNTSGDHCERCALGFYGIVRGSPNDCQPCACPLTVSSNNFSPSCVIEGVGDYRCT 1523
Query: 77 -CKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
C PG G C+RC + C+ CEC+P GS+ CD V GQC
Sbjct: 1524 ACPPGYEGQYCERCSSGYTGNPRIPGGSCQECECHPYGSLPVP--CDPVTGQC 1574
>gi|345803358|ref|XP_003435052.1| PREDICTED: laminin subunit alpha-3 isoform 2 [Canis lupus
familiaris]
Length = 3281
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 115/265 (43%), Gaps = 74/265 (27%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D + ++ GG C++CQ + G NCE C YY+ G
Sbjct: 356 CNCHGHAIDCYYDPDVERQQASLNIHGIYAGGGVCINCQHNTAGINCENCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+CNP + + + S GRC CKP GD C++C V +Y+F C
Sbjct: 416 PVDAPHGCIPCSCNPEHADDCEPGS-GRCTCKPNFQGDNCEKCAVGYYNF--PFCLRIPI 472
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI------WDLRR 160
P +TP+ + DP I W+
Sbjct: 473 FPV----STPSPE-----------------------------DPVAGDIKGCDCNWE--- 496
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G L C++ GRC C+PGV G +CD C V Y F C++C+C+ GS
Sbjct: 497 -----------GVLPEICDAYGRCLCRPGVEGPRCDACRVGFYSF--PICQACQCSVLGS 543
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ TP C+ V GQCEC+ + G +C
Sbjct: 544 YQ-TP-CNPVTGQCECQPGITGQRC 566
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 108/237 (45%), Gaps = 42/237 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS CN G+C+C+PG+T
Sbjct: 507 GRCL-CRPGVEGPRCDACRVGFYSFP---ICQACQCSVLGSYQTPCNPVTGQCECQPGIT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF C+PAG++ DS G C+ + H E
Sbjct: 563 GQRCDRCLSGAYDFPHCQGSRSVCDPAGTL------DSSLGYCQC-------KPHAE--- 606
Query: 143 QSRKNFDPA----GNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTG 192
P+ W+L + + + G + +G C CK V+G
Sbjct: 607 ------SPSCSICKPLYWNLAKENPNGCSECQCHVAGTVSGIGECGQRDGDCHCKSHVSG 660
Query: 193 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
D CD C+ ++ ++ GC+ C+C+ G+V TP C G C C+++V G C+
Sbjct: 661 DSCDTCEDGYFALKKSNYFGCQGCQCDIGGAV--TPMCSGPSGGCHCREHVVGKACQ 715
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G++ C+ EG +C C+P V G +C RC + +Y F CK C C P
Sbjct: 1269 CECHPTGAIGRPCSPEGGQCPCRPSVIGRQCTRCRMGYYGFPH--CKPCNCGPR------ 1320
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG-----NRIWDLRRCKRDTYPLGH 170
CD + G+C + R + E+ +F P N C R G
Sbjct: 1321 -LCDEMTGKCLCPPHTVRPQC--EVCDTHSFSFHPLAGCEGCN-------CSRR----GT 1366
Query: 171 GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
G+ +C+ + G+C+CKP +TG +CDRC Y F E C C CN G+ CD
Sbjct: 1367 VGAATRECDRDHGQCRCKPRITGRQCDRCASGFYHFPE--CIPCHCNKDGTESGV--CDP 1422
Query: 230 VKGQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 1423 GTGVCLCKENVEGTEC 1438
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 64/132 (48%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ +Y+ + C+ C C
Sbjct: 1690 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCERCKEGHYRNTIHGSCSVCPCP 1740
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1741 HSNSFATGCVVTGGNVRCSCKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGHLS 1799
Query: 114 NTPNCDSVKGQC 125
+C + G C
Sbjct: 1800 ---SCHPLTGDC 1808
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN---PIGSLNLQCNSE-GRCQCKP 79
G CL C P CE C + + C CNC+ +G+ +C+ + G+C+CKP
Sbjct: 1327 GKCL-CPPHTVRPQCEVCDTHSFSFHPLAGCEGCNCSRRGTVGAATRECDRDHGQCRCKP 1385
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
+TG +CDRC Y F E C C CN G+
Sbjct: 1386 RITGRQCDRCASGFYHFPE--CIPCHCNKDGT 1415
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 62/155 (40%), Gaps = 36/155 (23%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G CEC+P G++ C GQC + S GR T
Sbjct: 1265 GALPCECHPTGAIGRP--CSPEGGQC-PCRPSVIGRQCT--------------------- 1300
Query: 160 RCKRDTYPLGH------GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCK 211
RC+ Y H G L C+ G+C C P +C+ CD + + F AGC+
Sbjct: 1301 RCRMGYYGFPHCKPCNCGPRL---CDEMTGKCLCPPHTVRPQCEVCDTHSFSFHPLAGCE 1357
Query: 212 SCECNPAGSV-KNTPNCDSVKGQCECKDNVEGAQC 245
C C+ G+V T CD GQC CK + G QC
Sbjct: 1358 GCNCSRRGTVGAATRECDRDHGQCRCKPRITGRQC 1392
>gi|296209973|ref|XP_002751793.1| PREDICTED: laminin subunit beta-1 isoform 1 [Callithrix jacchus]
gi|390466857|ref|XP_003733662.1| PREDICTED: laminin subunit beta-1 isoform 2 [Callithrix jacchus]
Length = 1788
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 110/224 (49%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G +CE+C+ YYQ NF
Sbjct: 337 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRSCEQCKPFYYQHPERDIRDPNF 396
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G++CD C YD G
Sbjct: 397 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPFG 456
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L GR H + Q N + R
Sbjct: 457 CKSCACNPLGTIPGGNPCDSEIGHCYCKRL-VMGR-HCD---QCLPEHWGLSNDLDGCRP 511
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN +C++E G+C C+P + G +C + +Y
Sbjct: 512 CDCDL-----GGALNNRCSAESGQCSCRPHMIGRQCSEVEPGYY 550
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 752 PMTDVCRSIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 811
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV CD V GQC
Sbjct: 812 TFGFGPSGCKPCECSLQGSVNAF--CDPVTGQC 842
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G +C+ CR YY + C C CN +G++ CN + G+C
Sbjct: 997 GRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVCNYLGTVQEHCNGSDCQCDKATGQC 1056
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQC 125
C P VTG CDRC N + GC C CN A S P+C+ GQC
Sbjct: 1057 LCLPNVTGQNCDRCAPNTWQLASGTGCGPCNCNAAHSFG--PSCNEFTGQC 1105
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 106/277 (38%), Gaps = 61/277 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG + C G CL+CQ G NCE+C YY
Sbjct: 869 CQCNGHAEDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 919
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C + + E G
Sbjct: 920 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDNCASGFFGNPLEVG 972
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WD 157
C+ C+C+ + CD G+C + HTE F G+ + D
Sbjct: 973 GLCQPCQCHNNIDTTDPEACDKETGRC------LKCLYHTEGEHCQFCRFGYYGDALRQD 1026
Query: 158 LRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE-A 208
R+C + G++ CN + G+C C P VTG CDRC N +
Sbjct: 1027 CRKCV-----CNYLGTVQEHCNGSDCQCDKATGQCLCLPNVTGQNCDRCAPNTWQLASGT 1081
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C CN A S P+C+ GQC C G C
Sbjct: 1082 GCGPCNCNAAHSFG--PSCNEFTGQCHCMPGFGGRTC 1116
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV CD V
Sbjct: 781 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECSLQGSVNAF--CDPV 838
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 839 TGQCHCFQGVYARQC 853
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 90/248 (36%), Gaps = 79/248 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE C D ++ + N C CNCN S L
Sbjct: 298 GHCM-CRHNTKGLNCELCMDFHHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLAT 356
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDS 120
S G C C+ G C++C +Y E C+ C C+PAGS
Sbjct: 357 GNVSGGVCDDCQHNTMGRSCEQCKPFYYQHPERDIRDPNFCERCTCDPAGSQN------- 409
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+G C+S S G +
Sbjct: 410 -EGICDSYTDFSTGLI-------------------------------------------- 424
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G+C+CK V G++CD C YD GCKSC CNP G++ CDS G C CK
Sbjct: 425 AGQCRCKLHVEGERCDVCKEGFYDLSAEDPFGCKSCACNPLGTIPGGNPCDSEIGHCYCK 484
Query: 238 DNVEGAQC 245
V G C
Sbjct: 485 RLVMGRHC 492
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 101/247 (40%), Gaps = 48/247 (19%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS+N C+ G+C C GV
Sbjct: 791 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKPCECSLQGSVNAFCDPVTGQCHCFQGV 848
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 849 YARQCDRCLPGHWGF--PSCQPCQCN-----GHAEDCDPVTGECLNCQDYTMG--HNCER 899
Query: 142 VQSRKNFDP------------------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
+ DP +G + R C +D L +
Sbjct: 900 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQF--ARSCYQDPVTL------------QLA 945
Query: 184 CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDN 239
C C PG G +CD C + + E G C+ C+C+ + CD G+C +C +
Sbjct: 946 CVCDPGYIGSRCDNCASGFFGNPLEVGGLCQPCQCHNNIDTTDPEACDKETGRCLKCLYH 1005
Query: 240 VEGAQCR 246
EG C+
Sbjct: 1006 TEGEHCQ 1012
>gi|426354537|ref|XP_004044715.1| PREDICTED: laminin subunit alpha-2 [Gorilla gorilla gorilla]
Length = 3083
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTVGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECSQGHWNYPR--CNLCDCFLPGTDAATCDSETKKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTVGEKC 1041
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIHGKYIGGGVCINCTQNTAGVNCETCIDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTVGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C H+++ C C+C G+ + CDS +C
Sbjct: 1087 GAKCTECSQGHWNYPR--CNLCDCFLPGT--DAATCDSETKKC 1125
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECN 107
C I S N C +EG RC C G G C+RC + G G C+ CEC+
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1531 PYGSLPVP--CDPVTGFC 1546
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|334324176|ref|XP_001380290.2| PREDICTED: laminin subunit alpha-2 [Monodelphis domestica]
Length = 3132
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 116/267 (43%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C + +TG L+ QG R C++C+ + C CNC
Sbjct: 923 CNINGSFSEIC------HTKTGQCECRLNVQGLR----CDECQPQTFGLQSSQGCVPCNC 972
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGV G KCDRC ++ F E GC CEC G+ NCD
Sbjct: 973 NSFGSKSFDCEESGQCWCQPGVAGKKCDRCAHGYFKFQEGGCTPCECAHLGN-----NCD 1027
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
GQC P +C +++ GH
Sbjct: 1028 PNTGQC----------------------ICPPNTIGEKCDKCAPNSW--GHSIITGCKAC 1063
Query: 172 -----GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GS + QCN+ G+C C P +G KC C++ H+++ C C+C AG+ +T
Sbjct: 1064 NCSLVGSFDFQCNANTGQCSCHPEFSGTKCTECNLGHWNYPH--CNLCDCFLAGTDVSTC 1121
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
N ++ K GQC CK NVEG C
Sbjct: 1122 NSETEKCACLNHNGQCTCKVNVEGVHC 1148
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 109/269 (40%), Gaps = 70/269 (26%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP 61
N FS C D ++R G C +C GP CE+C + Y+ + C C CN
Sbjct: 819 NNFSPTCHLD---WSR---GLICDECPVGYTGPRCERCAEGYFGQPSIPGGSCQPCQCND 872
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+RC + FG+A C+ C CN
Sbjct: 873 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCERCADGY--FGDAIDAKNCQPCRCNIN 926
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR--RCKRDTYP 167
GS C + GQCE L VQ LR C+ T+
Sbjct: 927 GSFSEI--CHTKTGQCEC-----------RLNVQG-------------LRCDECQPQTFG 960
Query: 168 LGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
L GS + C G+C C+PGV G KCDRC ++ F E GC CEC
Sbjct: 961 LQSSQGCVPCNCNSFGSKSFDCEESGQCWCQPGVAGKKCDRCAHGYFKFQEGGCTPCECA 1020
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD GQC C N G +C
Sbjct: 1021 HLGN-----NCDPNTGQCICPPNTIGEKC 1044
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 75/196 (38%), Gaps = 59/196 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C + G C+KC N + S C ACNC+ +GS + QCN+ G+C C P +
Sbjct: 1031 GQCI-CPPNTIGEKCDKCAPNSWGHSIITGCKACNCSLVGSFDFQCNANTGQCSCHPEFS 1089
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C++ H+++ C C+C AG+ +T N ++ K C
Sbjct: 1090 GTKCTECNLGHWNYPH--CNLCDCFLAGTDVSTCNSETEKCAC----------------- 1130
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
N G+C CK V G CDRC
Sbjct: 1131 -----------------------------------LNHNGQCTCKVNVEGVHCDRCRPGK 1155
Query: 203 YDF---GEAGCKSCEC 215
+ GC SC C
Sbjct: 1156 FGLDAKNPLGCSSCYC 1171
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 36/242 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG-SLNLQCN----------SE 72
G C+ C+ + GP C++C +Y TA +C P LN+ N S
Sbjct: 774 GECMGCKDNTGGPYCDRCLPGFYGDPSKG--TADDCQPCACPLNIPSNNFSPTCHLDWSR 831
Query: 73 GRC--QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
G +C G TG +C+RC ++ C+ C+CN +CDS+ G C
Sbjct: 832 GLICDECPVGYTGPRCERCAEGYFGQPSIPGGSCQPCQCNDNLDFSIPGSCDSLSGSCLI 891
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP--LGHGGSLNLQCNSE-GRC 184
+ + GR + D D + C+ P GS + C+++ G+C
Sbjct: 892 CKPGTTGRY-------CERCADGYFGDAIDAKNCQ----PCRCNINGSFSEICHTKTGQC 940
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
+C+ V G +CD C + + GC C CN GS + +C+ GQC C+ V G
Sbjct: 941 ECRLNVQGLRCDECQPQTFGLQSSQGCVPCNCNSFGS--KSFDCEE-SGQCWCQPGVAGK 997
Query: 244 QC 245
+C
Sbjct: 998 KC 999
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1497 CTACPRGYEGQYCERCAFGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGHCTCRPGAT 1556
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1557 GQKCDGCKPGH 1567
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 60/143 (41%), Gaps = 34/143 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1423 CQCNGHSDTCDAETSI---------CQNCQHHTAGDFCERCALGYYGTVKGLPNDCRQCA 1473
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAG--------CK 102
C I S N C +EG RC C G G C+RC FG G C+
Sbjct: 1474 CPLITSSNNFSPSCIAEGLDDYRCTACPRGYEGQYCERC-----AFGYTGSPSSPGGSCQ 1528
Query: 103 SCECNPAGSVKNTPNCDSVKGQC 125
CEC+P GS+ P CD V G C
Sbjct: 1529 ECECDPYGSLP-VP-CDPVTGHC 1549
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 62/173 (35%), Gaps = 68/173 (39%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + +R GG C++C + G NCE C D +++ G
Sbjct: 347 CNCHGKAEECYYDENVASRNLSLNIHGKYIGGGVCINCTQNTTGINCETCIDGFFRPKGV 406
Query: 51 -DNF---CTACNCNPIGSLN---------------------------------------- 66
N+ C C C+PIGS++
Sbjct: 407 SPNYPSPCQPCYCDPIGSIHEVCVKDENHARRGLFPGSCHCKHGFEGVRCDRCARGYTGY 466
Query: 67 ---LQCNSEG-----------RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+QCN G C CK V G C C V ++ E K CE
Sbjct: 467 PDCVQCNCSGAGSTNHDPCIGTCNCKENVEGRDCSHCKVGFFNLQENNHKGCE 519
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G +CDRC + G C C C+ AGS N D G C CK+NVE
Sbjct: 443 GSCHCKHGFEGVRCDRCARGYT--GYPDCVQCNCSGAGST----NHDPCIGTCNCKENVE 496
Query: 242 GAQC 245
G C
Sbjct: 497 GRDC 500
>gi|291396946|ref|XP_002714771.1| PREDICTED: laminin alpha 2 subunit [Oryctolagus cuniculus]
Length = 3106
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 117/267 (43%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS+ C G C +C+ + G C++C+ + C CNC
Sbjct: 908 CNVNGSFSDVCH---------AQTGQC-ECRPNVQGRRCDECKRETFGLQSGRGCVPCNC 957
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+ NCD
Sbjct: 958 NSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCIACDCSHLGN-----NCD 1012
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
+ G+C P +C +T+ GH
Sbjct: 1013 PITGRC----------------------ICPPNTVGEKCSKCAPNTW--GHSIITGCKAC 1048
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT- 224
GSL+ QCN + G+C C P +G KC C+ H+++ C C+C G+ T
Sbjct: 1049 NCSAVGSLDFQCNINTGQCNCHPKFSGAKCAECNRGHWNYPH--CSLCDCFLPGTNAATC 1106
Query: 225 -P-----NCDSVKGQCECKDNVEGAQC 245
P +C GQC CK NVEG C
Sbjct: 1107 DPETQKCSCSDQTGQCTCKVNVEGVHC 1133
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 115/267 (43%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 804 NNFSPTCHLDRSL------GLVCDACPVGYTGPRCERCAEGYFGQPAVPGGSCQPCQCND 857
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+RC + FG+A C+ C CN
Sbjct: 858 ----NLDFSIPGSCDSLSGSCLICKPGTTGQYCERCADGY--FGDAVDAKNCQPCRCNVN 911
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS + C + GQCE VQ R+ CKR+T+ L
Sbjct: 912 GSFSDV--CHAQTGQCECRP-----------NVQGRR-----------CDECKRETFGLQ 947
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+
Sbjct: 948 SGRGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCIACDCSHL 1007
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD + G+C C N G +C
Sbjct: 1008 GN-----NCDPITGRCICPPNTVGEKC 1029
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 79/225 (35%), Gaps = 64/225 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1016 GRCI-CPPNTVGEKCSKCAPNTWGHSIITGCKACNCSAVGSLDFQCNINTGQCNCHPKFS 1074
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C+ H+++ C C+C G+ N CD +C
Sbjct: 1075 GAKCAECNRGHWNYPH--CSLCDCFLPGT--NAATCDPETQKCS---------------- 1114
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C T G+C CK V G CDRC
Sbjct: 1115 ------------------CSDQT----------------GQCTCKVNVEGVHCDRCRPGK 1140
Query: 203 YDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+ GC SC C A T C KG + Q
Sbjct: 1141 FGLDAKNPLGCSSCYCFGA-----TTQCSEAKGLIRTWVTLTAEQ 1180
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 105/254 (41%), Gaps = 60/254 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
CL+C+ GP C+KC +Y +NF C+ + SL
Sbjct: 759 AECLNCKDHTGGPYCDKCLPGFYGDPTKGTSEDCQPCACPLNIPSNNFSPTCHLD--RSL 816
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDS 120
L C++ C G TG +C+RC + FG+ C+ C+CN +CDS
Sbjct: 817 GLVCDA-----CPVGYTGPRCERCAEGY--FGQPAVPGGSCQPCQCNDNLDFSIPGSCDS 869
Query: 121 VKGQCESAQLSSRGRV-------HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
+ G C + + G+ + V + KN P RC + GS
Sbjct: 870 LSGSCLICKPGTTGQYCERCADGYFGDAVDA-KNCQPC--------RCNVN-------GS 913
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVK 231
+ C+++ G+C+C+P V G +CD C + GC C CN GS + +C+
Sbjct: 914 FSDVCHAQTGQCECRPNVQGRRCDECKRETFGLQSGRGCVPCNCNSFGS--KSFDCEE-S 970
Query: 232 GQCECKDNVEGAQC 245
GQC C+ V G +C
Sbjct: 971 GQCWCQPGVTGKKC 984
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1482 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGLCTCRPGAT 1541
Query: 83 GDKCDRCDVNH 93
G KCD C+ H
Sbjct: 1542 GRKCDGCEHWH 1552
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CKSC C+ +GS N D G C CK+N
Sbjct: 426 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKSCNCSGSGST----NEDPCFGPCNCKEN 479
Query: 240 VEGAQC 245
VEG C
Sbjct: 480 VEGGDC 485
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1408 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1458
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1459 CPLISSSNNFSPSCVMEGLDDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1518
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1519 PYGSLPVP--CDPVTGLC 1534
>gi|119466532|ref|NP_001073291.1| laminin subunit alpha-2 isoform b precursor [Homo sapiens]
Length = 3118
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECSRGHWNYPR--CNLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C H+++ C C+C G+ T CDS +C
Sbjct: 1087 GAKCTECSRGHWNYPR--CNLCDCFLPGTDATT--CDSETKKC 1125
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 105/268 (39%), Gaps = 66/268 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F +E G C CQ G C++C Y+ Q+ G CTAC
Sbjct: 967 CNCNSFGSKSFDCEE-------SGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACE 1015
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + GRC C P G+KC +C N + GCK+C C+ GS+
Sbjct: 1016 CSHLGN---NCDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDF-- 1070
Query: 117 NCDSVKGQC------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLG 169
C+ GQC A+ + R H W+ RC D + G
Sbjct: 1071 QCNVNTGQCNCHPKFSGAKCTECSRGH------------------WNYPRCNLCDCFLPG 1112
Query: 170 HGGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECN 216
+ C+SE G+C CK V G CDRC + GC SC C
Sbjct: 1113 TDAT---TCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYC- 1168
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
T C KG ++ Q
Sbjct: 1169 ----FGTTTQCSEAKGLIRTWVTLKAEQ 1192
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G+ C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 28/140 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCE 105
C I S N C +EG RC C G G C+RC + G G C+ CE
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYT--GSPGNPGGSCQECE 1528
Query: 106 CNPAGSVKNTPNCDSVKGQC 125
C+P GS+ CD V G C
Sbjct: 1529 CDPYGSLPVP--CDPVTGFC 1546
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|215274259|sp|P24043.4|LAMA2_HUMAN RecName: Full=Laminin subunit alpha-2; AltName: Full=Laminin M chain;
AltName: Full=Laminin-12 subunit alpha; AltName:
Full=Laminin-2 subunit alpha; AltName: Full=Laminin-4
subunit alpha; AltName: Full=Merosin heavy chain; Flags:
Precursor
gi|55961190|emb|CAI16682.1| laminin, alpha 2 (merosin, congenital muscular dystrophy) [Homo
sapiens]
Length = 3122
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECSRGHWNYPR--CNLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C H+++ C C+C G+ T CDS +C
Sbjct: 1087 GAKCTECSRGHWNYPR--CNLCDCFLPGTDATT--CDSETKKC 1125
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 105/268 (39%), Gaps = 66/268 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F +E G C CQ G C++C Y+ Q+ G CTAC
Sbjct: 967 CNCNSFGSKSFDCEE-------SGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACE 1015
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + GRC C P G+KC +C N + GCK+C C+ GS+
Sbjct: 1016 CSHLGN---NCDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDF-- 1070
Query: 117 NCDSVKGQC------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLG 169
C+ GQC A+ + R H W+ RC D + G
Sbjct: 1071 QCNVNTGQCNCHPKFSGAKCTECSRGH------------------WNYPRCNLCDCFLPG 1112
Query: 170 HGGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECN 216
+ C+SE G+C CK V G CDRC + GC SC C
Sbjct: 1113 TDAT---TCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYC- 1168
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
T C KG ++ Q
Sbjct: 1169 ----FGTTTQCSEAKGLIRTWVTLKAEQ 1192
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G+ C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 28/140 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCE 105
C I S N C +EG RC C G G C+RC + G G C+ CE
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYT--GSPGNPGGSCQECE 1528
Query: 106 CNPAGSVKNTPNCDSVKGQC 125
C+P GS+ CD V G C
Sbjct: 1529 CDPYGSLPVP--CDPVTGFC 1546
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|444716577|gb|ELW57421.1| Multiple epidermal growth factor-like domains protein 9 [Tupaia
chinensis]
Length = 447
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C G +CE CR+ +Y C C+C P G+L + C+S G+CQCK GVTG KCD
Sbjct: 43 ECHPGYQGLHCETCREGFYWNRTSGLCLPCDCVPHGALIVLCDSSGKCQCKVGVTGSKCD 102
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F GC C CN + +CD++ G C + Q +SRG H E + ++
Sbjct: 103 RCQDGYYGFSRNGCLPCRCN-----NRSASCDALTGTCLNCQENSRGD-HCE---ECKEG 153
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ SE C QCK G TG C+ C+ +Y+
Sbjct: 154 FYQSPDATKECLRCPCSA--VTSTGSCSIKSGESEPTCVQCKEGYTGPNCNACENGYYN- 210
Query: 206 GEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
++ C C+C+ TP C G+C C N G C
Sbjct: 211 SDSICTECQCHGHVDRTKTPKICKPESGECINCLHNTTGFWCE 253
>gi|28559088|ref|NP_000417.2| laminin subunit alpha-2 isoform a precursor [Homo sapiens]
gi|225000032|gb|AAI72257.1| Laminin, alpha 2 [synthetic construct]
gi|225000290|gb|AAI72564.1| Laminin, alpha 2 [synthetic construct]
Length = 3122
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECSRGHWNYPR--CNLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C H+++ C C+C G+ T CDS +C
Sbjct: 1087 GAKCTECSRGHWNYPR--CNLCDCFLPGTDATT--CDSETKKC 1125
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 105/268 (39%), Gaps = 66/268 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F +E G C CQ G C++C Y+ Q+ G CTAC
Sbjct: 967 CNCNSFGSKSFDCEE-------SGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACE 1015
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + GRC C P G+KC +C N + GCK+C C+ GS+
Sbjct: 1016 CSHLGN---NCDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDF-- 1070
Query: 117 NCDSVKGQC------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLG 169
C+ GQC A+ + R H W+ RC D + G
Sbjct: 1071 QCNVNTGQCNCHPKFSGAKCTECSRGH------------------WNYPRCNLCDCFLPG 1112
Query: 170 HGGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECN 216
+ C+SE G+C CK V G CDRC + GC SC C
Sbjct: 1113 TDAT---TCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYC- 1168
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
T C KG ++ Q
Sbjct: 1169 ----FGTTTQCSEAKGLIRTWVTLKAEQ 1192
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G+ C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 28/140 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCE 105
C I S N C +EG RC C G G C+RC + G G C+ CE
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYT--GSPGNPGGSCQECE 1528
Query: 106 CNPAGSVKNTPNCDSVKGQC 125
C+P GS+ CD V G C
Sbjct: 1529 CDPYGSLPVP--CDPVTGFC 1546
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|397514859|ref|XP_003827688.1| PREDICTED: laminin subunit alpha-2 isoform 1 [Pan paniscus]
Length = 3122
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 107/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C+ H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECNRGHWNYPR--CNLCDCFLPGTDAATCDSETEKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCIDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C+ H+++ C C+C G+ + CDS +C
Sbjct: 1087 GAKCTECNRGHWNYPR--CNLCDCFLPGT--DAATCDSETEKC 1125
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 60/138 (43%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECN 107
C I S N C +EG RC C G G C+RC + G G C+ CEC+
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ P CD V G C
Sbjct: 1531 PYGSLP-VP-CDPVTGFC 1546
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|395511615|ref|XP_003760052.1| PREDICTED: laminin subunit alpha-3 [Sarcophilus harrisii]
Length = 3127
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 42/237 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ DGP C+ C +Y C AC C+P+GS C+ G+C+C+PG+T
Sbjct: 482 GKCL-CRFGVDGPKCDSCSSGFYSFPA---CQACQCSPLGSYQTTCDPVTGQCECRPGIT 537
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CD+C YDF S ECNPAG++ DS G C+ QL +G + +
Sbjct: 538 GQQCDQCLSGAYDFPHCQGFSSECNPAGTI------DSSSGYCQ-CQLYVKGPTCSICK- 589
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLG-------HGGSLNL--QC-NSEGRCQCKPGVTG 192
W+L D P G G+L+ +C EG C CKP V G
Sbjct: 590 ----------PLYWNLA----DENPDGCSECQCDVTGTLSGVGECEQKEGECYCKPHVCG 635
Query: 193 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
D C+ C+ ++ G++ GC+ C C+ GSV CD + G C+C++++ G C+
Sbjct: 636 DSCNTCEDGYFALGDSNYFGCQGCHCDIGGSVSFM--CDDLSGACQCREHIMGQSCQ 690
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 132/308 (42%), Gaps = 80/308 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC+G + C++D ++ ++ GG C++CQ + G NCEKC YY+
Sbjct: 352 CNCHGHATDCYYDPDVERQSESLNIHGVYEGGGVCINCQHNTAGVNCEKCIQGYYRPYNV 411
Query: 49 ----------------------------------SGDN------------FCTACNCNPI 62
G+N FC C CNP+
Sbjct: 412 PVEAPHGCMPCSCNPENTNGCEEGTGRCFCKSNFQGENCERCAEGFYNFPFCQRCECNPV 471
Query: 63 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 122
G ++ C+ +G+C C+ GV G KCD C Y F C++C+C+P GS + T CD V
Sbjct: 472 GVVSEICDFQGKCLCRFGVDGPKCDSCSSGFYSF--PACQACQCSPLGSYQTT--CDPVT 527
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG 182
GQCE R + + + D + +D C+ + G+++ +S G
Sbjct: 528 GQCE-----CRPGI-------TGQQCDQCLSGAYDFPHCQGFSSECNPAGTID---SSSG 572
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
CQC+ V G C C +++ + GC C+C+ G++ C+ +G+C CK +
Sbjct: 573 YCQCQLYVKGPTCSICKPLYWNLADENPDGCSECQCDVTGTLSGVGECEQKEGECYCKPH 632
Query: 240 VEGAQCRS 247
V G C +
Sbjct: 633 VCGDSCNT 640
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 97/198 (48%), Gaps = 25/198 (12%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C+C+ +G+++ C+ EG +CQC+P V G +C RC +Y F CK C C
Sbjct: 1238 NNGALPCDCHGVGAVSPTCDPEGGQCQCRPNVIGRQCTRCQTGYYGF--PFCKLCHCGQR 1295
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
CD + G+C + V + V +++F L CK + +
Sbjct: 1296 L-------CDEMTGKC----ICPPRTVKPQCEVCEKQSFS-----YHPLVGCKGCNCSRI 1339
Query: 169 GHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G + +C+ + G+C+CKP +TG +CDRC Y F E C C CN G+ C
Sbjct: 1340 GAISAPAPECDRNSGQCRCKPRITGRQCDRCASGFYHFPE--CLPCNCNQDGTESGV--C 1395
Query: 228 DSVKGQCECKDNVEGAQC 245
D G C CK+NVEGA+C
Sbjct: 1396 DPWTGACLCKENVEGAEC 1413
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G NCE+C++ YY + C C C
Sbjct: 1666 CNCNGHSNRC---------QDGSGICINCQHNTAGANCERCKEGYYGDALQGSCQVCPCP 1716
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G +C CKPG G +C+RC ++ FG C+ C CN G +
Sbjct: 1717 HTNSFATGCVVNGGNVKCSCKPGYVGVQCERCAPGYFGNPQKFG-GSCQPCNCNNNGQLI 1775
Query: 114 NTPNCDSVKGQC 125
NCD + G C
Sbjct: 1776 ---NCDPLTGDC 1784
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 102/254 (40%), Gaps = 64/254 (25%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCNPIG--------------SLN 66
+CQ + G +C+ C Y QK N C CNC+ SLN
Sbjct: 316 ECQHNTCGESCDHCCAGYNQKQWRPATAERTNECEVCNCHGHATDCYYDPDVERQSESLN 375
Query: 67 LQCNSEGR---CQCKPGVTGDKCDRCDVNHYD------FGEAGCKSCECNPAGSVKNTPN 117
+ EG C+ G C++C +Y GC C CNP +NT
Sbjct: 376 IHGVYEGGGVCINCQHNTAGVNCEKCIQGYYRPYNVPVEAPHGCMPCSCNP----ENTNG 431
Query: 118 CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-----GNRIWDLRRCKR-DTYPLGHG 171
C+ G+C + NF ++ C+R + P+G
Sbjct: 432 CEEGTGRCF-----------------CKSNFQGENCERCAEGFYNFPFCQRCECNPVGVV 474
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
+ C+ +G+C C+ GV G KCD C Y F C++C+C+P GS + T CD V
Sbjct: 475 SEI---CDFQGKCLCRFGVDGPKCDSCSSGFYSF--PACQACQCSPLGSYQTT--CDPVT 527
Query: 232 GQCECKDNVEGAQC 245
GQCEC+ + G QC
Sbjct: 528 GQCECRPGITGQQC 541
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 22/137 (16%)
Query: 2 NCNGFSNRCFFDKELYNRTG----HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CT 55
+C GFS+ C N G G+C CQ GP C C+ Y+ + +N C+
Sbjct: 553 HCQGFSSEC-------NPAGTIDSSSGYC-QCQLYVKGPTCSICKPLYWNLADENPDGCS 604
Query: 56 ACNCNPIGSLNL--QC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPA 109
C C+ G+L+ +C EG C CKP V GD C+ C+ ++ G++ GC+ C C+
Sbjct: 605 ECQCDVTGTLSGVGECEQKEGECYCKPHVCGDSCNTCEDGYFALGDSNYFGCQGCHCDIG 664
Query: 110 GSVKNTPNCDSVKGQCE 126
GSV CD + G C+
Sbjct: 665 GSVSFM--CDDLSGACQ 679
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKPGVTGDKCDRCDV 91
P CE C + C CNC+ IG+++ + G+C+CKP +TG +CDRC
Sbjct: 1313 PQCEVCEKQSFSYHPLVGCKGCNCSRIGAISAPAPECDRNSGQCRCKPRITGRQCDRCAS 1372
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1373 GFYHFPE--CLPCNCNQDGTESGV--CDPWTGAC 1402
>gi|119568467|gb|EAW48082.1| laminin, alpha 2 (merosin, congenital muscular dystrophy), isoform
CRA_c [Homo sapiens]
Length = 3116
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECSRGHWNYPR--CNLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C H+++ C C+C G+ T CDS +C
Sbjct: 1087 GAKCTECSRGHWNYPR--CNLCDCFLPGTDATT--CDSETKKC 1125
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 105/268 (39%), Gaps = 66/268 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F +E G C CQ G C++C Y+ Q+ G CTAC
Sbjct: 967 CNCNSFGSKSFDCEE-------SGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACE 1015
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + GRC C P G+KC +C N + GCK+C C+ GS+
Sbjct: 1016 CSHLGN---NCDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDF-- 1070
Query: 117 NCDSVKGQC------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLG 169
C+ GQC A+ + R H W+ RC D + G
Sbjct: 1071 QCNVNTGQCNCHPKFSGAKCTECSRGH------------------WNYPRCNLCDCFLPG 1112
Query: 170 HGGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECN 216
+ C+SE G+C CK V G CDRC + GC SC C
Sbjct: 1113 TDAT---TCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYC- 1168
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
T C KG ++ Q
Sbjct: 1169 ----FGTTTQCSEAKGLIRTWVTLKAEQ 1192
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G+ C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 28/140 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCE 105
C I S N C +EG RC C G G C+RC + G G C+ CE
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYT--GSPGNPGGSCQECE 1528
Query: 106 CNPAGSVKNTPNCDSVKGQC 125
C+P GS+ CD V G C
Sbjct: 1529 CDPYGSLPVP--CDPVTGFC 1546
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|397514861|ref|XP_003827689.1| PREDICTED: laminin subunit alpha-2 isoform 2 [Pan paniscus]
Length = 3118
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 107/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C+ H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECNRGHWNYPR--CNLCDCFLPGTDAATCDSETEKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCIDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C+ H+++ C C+C G+ + CDS +C
Sbjct: 1087 GAKCTECNRGHWNYPR--CNLCDCFLPGT--DAATCDSETEKC 1125
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 60/138 (43%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECN 107
C I S N C +EG RC C G G C+RC + G G C+ CEC+
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ P CD V G C
Sbjct: 1531 PYGSLP-VP-CDPVTGFC 1546
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
>gi|395824083|ref|XP_003785301.1| PREDICTED: multiple epidermal growth factor-like domains protein 9
[Otolemur garnettii]
Length = 594
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 114/228 (50%), Gaps = 26/228 (11%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G CE C++ +Y C C+C+P G+L++QCNS G+CQCK GV G CD
Sbjct: 217 ECQPGYQGLLCETCKEGFYLNHTSGLCLPCDCSPHGALSMQCNSSGKCQCKVGVIGSSCD 276
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 277 QCHNGYYGFSKNGCFPCQCN-----NRSTSCDALTGACLNCQENSKGN-HCE---ECKEG 327
Query: 148 FDPAGNRIWDLRRCK-RDTYPLGH----GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
F + + + RC G+ G L +C QCK G TG C+ C+ +
Sbjct: 328 FYQSPDATKECLRCPCSAVTSTGNCTIKFGELEPEC-----VQCKEGYTGQNCNICENGY 382
Query: 203 YDFGEAGCKSCECNPAGSVKNTPN---CDSVKGQC-ECKDNVEGAQCR 246
Y+F ++ CK C+C+ G V T N C G+C C N G C
Sbjct: 383 YNF-DSICKKCQCH--GHVNTTQNPKICKPESGECINCIHNTTGFWCE 427
>gi|443709409|gb|ELU04081.1| hypothetical protein CAPTEDRAFT_46637, partial [Capitella teleta]
Length = 237
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 38 CEKCRDNYYQKSGDN--FCTACNCNPIGSLN--LQCNS-EGRCQCKPGVTGDKCDRCDVN 92
CE CR Y+ DN C C CN G++N +C++ G+C CK V G +CD C
Sbjct: 3 CETCRPGYFNLLPDNDKGCQECICNITGTVNASTECDAVTGQCPCKTNVGGLRCDACLPG 62
Query: 93 HY--DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD 149
+Y +F GC C C AG++ + P+CD G+C + V F+
Sbjct: 63 YYTNNFSSPDGCLFCGCEAAGTIPSQPDCDVETGECAC----KNNVIGKNCDVCKDMYFN 118
Query: 150 PAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY----- 203
+ + C D GS+N CN + G+C CKP VTG CD+C V++Y
Sbjct: 119 LTASNVDGCEDCNCDA-----SGSVNASCNVTNGQCYCKPNVTGRTCDQCSVDYYARDSS 173
Query: 204 DFGEAGC-KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+F E GC + C+C+P G V +C GQC CK NV+G +C +
Sbjct: 174 EFTEKGCLEVCDCDPNGVVDGDLDCADYGGQCRCKSNVKGRRCDA 218
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 78/186 (41%), Gaps = 15/186 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQK--SGDNFCTACNCNPIGSLNLQ--CNSE-GRCQCKPGVTG 83
C+ + G C+ C YY S + C C C G++ Q C+ E G C CK V G
Sbjct: 47 CKTNVGGLRCDACLPGYYTNNFSSPDGCLFCGCEAAGTIPSQPDCDVETGECACKNNVIG 106
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
CD C +++ + GC+ C C+ +GSV +C+ GQC + + GR +
Sbjct: 107 KNCDVCKDMYFNLTASNVDGCEDCNCDASGSVN--ASCNVTNGQC-YCKPNVTGRTCDQC 163
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRCQCKPGVTGDKCDRCD 199
V L C D + G +L C + G+C+CK V G +CD C
Sbjct: 164 SVDYYARDSSEFTEKGCLEVCDCDPNGVVDG---DLDCADYGGQCRCKSNVKGRRCDACA 220
Query: 200 VNHYDF 205
Y
Sbjct: 221 PLFYGL 226
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 194 KCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+C+ C +++ + GC+ C CN G+V + CD+V GQC CK NV G +C +
Sbjct: 2 QCETCRPGYFNLLPDNDKGCQECICNITGTVNASTECDAVTGQCPCKTNVGGLRCDA 58
>gi|410226164|gb|JAA10301.1| laminin, alpha 2 [Pan troglodytes]
gi|410308938|gb|JAA33069.1| laminin, alpha 2 [Pan troglodytes]
gi|410354269|gb|JAA43738.1| laminin, alpha 2 [Pan troglodytes]
Length = 3122
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 107/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C+ H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECNRGHWNYPR--CNLCDCFLPGTDAATCDSETEKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCIDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C+ H+++ C C+C G+ + CDS +C
Sbjct: 1087 GAKCTECNRGHWNYPR--CNLCDCFLPGT--DAATCDSETEKC 1125
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSGLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECN 107
C I S N C +EG RC C G G C+RC + G G C+ CEC+
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1531 PYGSLPVP--CDPVTGFC 1546
>gi|73961821|ref|XP_537297.2| PREDICTED: laminin subunit alpha-3 isoform 4 [Canis lupus
familiaris]
Length = 3337
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 115/265 (43%), Gaps = 74/265 (27%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D + ++ GG C++CQ + G NCE C YY+ G
Sbjct: 356 CNCHGHAIDCYYDPDVERQQASLNIHGIYAGGGVCINCQHNTAGINCENCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+CNP + + + S GRC CKP GD C++C V +Y+F C
Sbjct: 416 PVDAPHGCIPCSCNPEHADDCEPGS-GRCTCKPNFQGDNCEKCAVGYYNF--PFCLRIPI 472
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI------WDLRR 160
P +TP+ + DP I W+
Sbjct: 473 FPV----STPSPE-----------------------------DPVAGDIKGCDCNWE--- 496
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G L C++ GRC C+PGV G +CD C V Y F C++C+C+ GS
Sbjct: 497 -----------GVLPEICDAYGRCLCRPGVEGPRCDACRVGFYSF--PICQACQCSVLGS 543
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ TP C+ V GQCEC+ + G +C
Sbjct: 544 YQ-TP-CNPVTGQCECQPGITGQRC 566
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 108/237 (45%), Gaps = 42/237 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS CN G+C+C+PG+T
Sbjct: 507 GRCL-CRPGVEGPRCDACRVGFYSFP---ICQACQCSVLGSYQTPCNPVTGQCECQPGIT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF C+PAG++ DS G C+ + H E
Sbjct: 563 GQRCDRCLSGAYDFPHCQGSRSVCDPAGTL------DSSLGYCQC-------KPHAE--- 606
Query: 143 QSRKNFDPA----GNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTG 192
P+ W+L + + + G + +G C CK V+G
Sbjct: 607 ------SPSCSICKPLYWNLAKENPNGCSECQCHVAGTVSGIGECGQRDGDCHCKSHVSG 660
Query: 193 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
D CD C+ ++ ++ GC+ C+C+ G+V TP C G C C+++V G C+
Sbjct: 661 DSCDTCEDGYFALKKSNYFGCQGCQCDIGGAV--TPMCSGPSGGCHCREHVVGKACQ 715
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 91/200 (45%), Gaps = 41/200 (20%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G++ C+ EG +C C+P V G +C RC + +Y F CK C C P + T
Sbjct: 1269 CECHPTGAIGRPCSPEGGQCPCRPSVIGRQCTRCRMGYYGFPH--CKPCNCGPRLCDEMT 1326
Query: 116 PNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG-----NRIWDLRRCKRDTY 166
C +V+ QCE S +F P N C R
Sbjct: 1327 GKCLCPPHTVRPQCEVCDTHSF-------------SFHPLAGCEGCN-------CSRR-- 1364
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G G+ +C+ + G+C+CKP +TG +CDRC Y F E C C CN G+
Sbjct: 1365 --GTVGAATRECDRDHGQCRCKPRITGRQCDRCASGFYHFPE--CIPCHCNKDGTESGV- 1419
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD G C CK+NVEG +C
Sbjct: 1420 -CDPGTGVCLCKENVEGTEC 1438
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 64/132 (48%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ +Y+ + C+ C C
Sbjct: 1690 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCERCKEGHYRNTIHGSCSVCPCP 1740
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1741 HSNSFATGCVVTGGNVRCSCKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGHLS 1799
Query: 114 NTPNCDSVKGQC 125
+C + G C
Sbjct: 1800 ---SCHPLTGDC 1808
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN---PIGSLNLQCNSE-GRCQCKP 79
G CL C P CE C + + C CNC+ +G+ +C+ + G+C+CKP
Sbjct: 1327 GKCL-CPPHTVRPQCEVCDTHSFSFHPLAGCEGCNCSRRGTVGAATRECDRDHGQCRCKP 1385
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
+TG +CDRC Y F E C C CN G+
Sbjct: 1386 RITGRQCDRCASGFYHFPE--CIPCHCNKDGT 1415
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 62/155 (40%), Gaps = 36/155 (23%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G CEC+P G++ C GQC + S GR T
Sbjct: 1265 GALPCECHPTGAIGRP--CSPEGGQC-PCRPSVIGRQCT--------------------- 1300
Query: 160 RCKRDTYPLGH------GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCK 211
RC+ Y H G L C+ G+C C P +C+ CD + + F AGC+
Sbjct: 1301 RCRMGYYGFPHCKPCNCGPRL---CDEMTGKCLCPPHTVRPQCEVCDTHSFSFHPLAGCE 1357
Query: 212 SCECNPAGSV-KNTPNCDSVKGQCECKDNVEGAQC 245
C C+ G+V T CD GQC CK + G QC
Sbjct: 1358 GCNCSRRGTVGAATRECDRDHGQCRCKPRITGRQC 1392
>gi|410308936|gb|JAA33068.1| laminin, alpha 2 [Pan troglodytes]
gi|410354267|gb|JAA43737.1| laminin, alpha 2 [Pan troglodytes]
Length = 3118
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 107/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C+ H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECNRGHWNYPR--CNLCDCFLPGTDAATCDSETEKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCIDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C+ H+++ C C+C G+ + CDS +C
Sbjct: 1087 GAKCTECNRGHWNYPR--CNLCDCFLPGT--DAATCDSETEKC 1125
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSGLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECN 107
C I S N C +EG RC C G G C+RC + G G C+ CEC+
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1531 PYGSLPVP--CDPVTGFC 1546
>gi|393910844|gb|EJD76062.1| laminin alpha [Loa loa]
Length = 3668
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ + G C+ C D Y+ G C CNC+ IG+ + C+ E G C CKPG +G +CD
Sbjct: 534 CKTNFAGLTCDNCADGYF---GHALCEYCNCDTIGTEDGICDKETGACLCKPGFSGSRCD 590
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRK 146
C +N Y G CK C CN GS CD G C A +SR
Sbjct: 591 ECSLNFY--GYPYCKECGCNAPGS--KLAECDRKNGDCSCYANFTSR------------- 633
Query: 147 NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF 205
D +D CK +G G + C++ G+C CKP G++CD+C N Y+F
Sbjct: 634 KCDRCAAGFYDFPNCKPCSCLTIGSKG---MTCDNNGQCYCKPNFQGERCDQCKTNFYNF 690
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQC 245
C+ C CNP G V CD V+ C CK +V G C
Sbjct: 691 --PICEECNCNPKGVVAGFAGCDKVEPGELCTCKTHVAGRIC 730
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + C++C +Y C C+C IGS + C++ G+C CKP G++CD+
Sbjct: 626 CYANFTSRKCDRCAAGFYDFPN---CKPCSCLTIGSKGMTCDNNGQCYCKPNFQGERCDQ 682
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C N Y+F C+ C CNP G V CD V+ G+ + + GR+
Sbjct: 683 CKTNFYNF--PICEECNCNPKGVVAGFAGCDKVEPGELCTCKTHVAGRI----------- 729
Query: 148 FDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 200
D WDL+ D G LN +C+ E G+C CK V G +CD+C
Sbjct: 730 CDQCKPTYWDLQYYHEDGCVRCDCNLAGTLSGLN-ECSIEGGQCNCKRHVVGRRCDKCAD 788
Query: 201 NHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ + GC++C C+ G++ CD GQC C+ + G +C
Sbjct: 789 GFFQLKVHNQFGCQACNCDVGGALG--AGCDMQTGQCRCRPRITGQKC 834
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 106/282 (37%), Gaps = 81/282 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY--------------- 45
CNCNG S C G C DC+ D G +CE CR +
Sbjct: 1815 CNCNGHSGSC---------DSTTGICFDCEHDTFGDHCEFCRVGFYGDAIKGGPYSCLPC 1865
Query: 46 ---YQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 99
Y +NF T+C + G L C CK G T D C+RCDV ++ A
Sbjct: 1866 PCPYATDTNNFATSCQVSETGLLE-------SCFCKKGYTSDHCERCDVGYHGQPTAVDG 1918
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
C C+CN + +C + G C L++ H E
Sbjct: 1919 SCHKCDCNNNNDLSVDGSCHPITGDCYLC-LNNTDGAHCE-------------------- 1957
Query: 160 RCKRDTYPLGHGGSLNL---------QC------NSEGRCQCKPGVTGDKCDRCDVNHYD 204
CK P +G ++ QC N GRC+C V G+KCDRC +N +
Sbjct: 1958 HCK----PWFYGDAVEAKNCTDCACNQCGSSLCDNRSGRCECLANVEGEKCDRCVMNAWG 2013
Query: 205 FGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F GC+ C C A S +P CD+ GQC C G C
Sbjct: 2014 FMRCHGCEMCNCALASS---SPQCDAETGQCSCMPGAAGQMC 2052
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 109/269 (40%), Gaps = 54/269 (20%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC G S C ++KEL + GG CL+C+ + +G NC KC YY+
Sbjct: 351 CNCYGHSEECVYEKELDRMHSSIDIHGSYDGGGRCLNCRDNTEGINCNKCVFGYYRPRTK 410
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C C+P + RC CKP TG CDRC HY CK C+C
Sbjct: 411 WWNETDVCQPCVCDPTKHTGDCEDETARCFCKPQFTGMNCDRCAPGHY--SPPKCKPCDC 468
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ G++ + C + G+C + N+ G + + C
Sbjct: 469 SVNGTLDGS--CLPINGRCP-----------------CKSNY---GGEL--CQECAPGYT 504
Query: 167 PLGHG---------GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
L G GSL+ CN S +C CK G CD C + FG A C+ C C+
Sbjct: 505 NLTAGCISCNCNELGSLHNSCNESTAQCICKTNFAGLTCDNCADGY--FGHALCEYCNCD 562
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ CD G C CK G++C
Sbjct: 563 TIGTEDGI--CDKETGACLCKPGFSGSRC 589
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C C + DG +CE C+ +Y + + CT C CN GS +L N GRC+C V
Sbjct: 1942 GDCYLCLNNTDGAHCEHCKPWFYGDAVEAKNCTDCACNQCGS-SLCDNRSGRCECLANVE 2000
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G+KCDRC +N + F GC+ C C A S +P CD+ GQC S + G++ E+
Sbjct: 2001 GEKCDRCVMNAWGFMRCHGCEMCNCALASS---SPQCDAETGQC-SCMPGAAGQM-CEIC 2055
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDV 200
N+ P G D C+ D S+ C+ + G+C C+ G TG +CD+C
Sbjct: 2056 EYGYWNYGPTGCSKCD---CEADL-------SMGTVCDVNTGQCHCQEGATGPRCDQCAS 2105
Query: 201 NHYDFGEAGCKSCE 214
+ GC+ C+
Sbjct: 2106 QYLRIPNFGCRLCD 2119
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 45/196 (22%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN-----LQCNSEGRCQCKPGVTG 83
C+ + G C++C+ N+Y C CNCNP G + + C CK V G
Sbjct: 671 CKPNFQGERCDQCKTNFYNFP---ICEECNCNPKGVVAGFAGCDKVEPGELCTCKTHVAG 727
Query: 84 DKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQC------------ESA 128
CD+C ++D + E GC C+CN AG++ C GQC + A
Sbjct: 728 RICDQCKPTYWDLQYYHEDGCVRCDCNLAGTLSGLNECSIEGGQCNCKRHVVGRRCDKCA 787
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCK 187
+ +VH + Q+ C D GG+L C+ + G+C+C+
Sbjct: 788 DGFFQLKVHNQFGCQA----------------CNCDV-----GGALGAGCDMQTGQCRCR 826
Query: 188 PGVTGDKCDRCDVNHY 203
P +TG KCDR NHY
Sbjct: 827 PRITGQKCDRPIENHY 842
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 87/216 (40%), Gaps = 35/216 (16%)
Query: 39 EKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
E CR + + + A C C+ GS + C G C C+P + G +CDRC +Y
Sbjct: 1379 EYCRQKVFSLTSEYNMAALPCECSSQGSTSFMCEKYGGECSCRPNIIGRRCDRCAPGYYS 1438
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR-----VQSRKNFDP 150
F + C C+C + CD GQC H E + V +DP
Sbjct: 1439 FPD--CIKCKC------PDNHLCDENTGQCFCPS-------HVEGKHCDSCVPYAFGYDP 1483
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG 209
L C+ + LQC+ + G+C CK V G KCD+C Y F
Sbjct: 1484 -------LIGCQLCGCQQNGSEARQLQCDPDNGQCLCKANVGGRKCDKCLPGFYGFPH-- 1534
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C C G+ + C+S C+CK NV G C
Sbjct: 1535 CYECACEIKGTTEEI--CESTNAACKCKKNVIGENC 1568
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQ-KSGDNF-CTACNCNPIGSLNLQCNSE-GRCQCKP 79
GG C +C+ G C+KC D ++Q K + F C ACNC+ G+L C+ + G+C+C+P
Sbjct: 769 GGQC-NCKRHVVGRRCDKCADGFFQLKVHNQFGCQACNCDVGGALGAGCDMQTGQCRCRP 827
Query: 80 GVTGDKCDRCDVNHY 94
+TG KCDR NHY
Sbjct: 828 RITGQKCDRPIENHY 842
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
QC++E G+C C PG G C+ C+ ++++G GC C+C S+ CD GQC
Sbjct: 2033 QCDAETGQCSCMPGAAGQMCEICEYGYWNYGPTGCSKCDCEADLSMGTV--CDVNTGQCH 2090
Query: 236 CKDNVEGAQC 245
C++ G +C
Sbjct: 2091 CQEGATGPRC 2100
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
RC CKP TG CDRC HY CK C+C+ G++ + C + G+C CK N
Sbjct: 437 ARCFCKPQFTGMNCDRCAPGHY--SPPKCKPCDCSVNGTLDGS--CLPINGRCPCKSNYG 492
Query: 242 GAQCR 246
G C+
Sbjct: 493 GELCQ 497
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS + C G C C+P + G +CDRC +Y F + C C+C + CD
Sbjct: 1405 GSTSFMCEKYGGECSCRPNIIGRRCDRCAPGYYSFPD--CIKCKC------PDNHLCDEN 1456
Query: 231 KGQCECKDNVEGAQCRS 247
GQC C +VEG C S
Sbjct: 1457 TGQCFCPSHVEGKHCDS 1473
>gi|296199230|ref|XP_002746996.1| PREDICTED: laminin subunit alpha-2 isoform 2 [Callithrix jacchus]
Length = 3118
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 115/267 (43%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C G C +C+ + G C++C+ + C CNC
Sbjct: 920 CNANGSFSEICH---------SQTGQC-ECRANVQGRRCDECKPGTFDLQSARGCVPCNC 969
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC +++F E GC +CEC G+ NCD
Sbjct: 970 NSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECAHLGN-----NCD 1024
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
G+C P +C +T+ GH
Sbjct: 1025 PKTGRC----------------------ICPPNTIGEKCSKCAPNTW--GHSITTGCKAC 1060
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G+C C P +G KC C+ H+++ C C+C G+ T
Sbjct: 1061 NCSAVGSLDFQCNVNTGQCNCHPKFSGAKCTECNRGHWNYPH--CNLCDCFLPGTDAATC 1118
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
+ ++ K GQC CK NVEG C
Sbjct: 1119 DLETKKCSCSDKTGQCTCKVNVEGVHC 1145
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDECPAGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCLCNAN 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE VQ R+ CK T+ L
Sbjct: 924 GSFSEI--CHSQTGQCEC-----------RANVQGRR-----------CDECKPGTFDLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECAHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCNCKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C +EG RC C G G C+RC + + C+ CEC+
Sbjct: 1471 CPLISSSNNFSPSCVAEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ P CD V G C
Sbjct: 1531 PYGSLP-VP-CDPVTGFC 1546
>gi|312070338|ref|XP_003138100.1| abnormal epIthelia family member [Loa loa]
Length = 3596
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ + G C+ C D Y+ G C CNC+ IG+ + C+ E G C CKPG +G +CD
Sbjct: 580 CKTNFAGLTCDNCADGYF---GHALCEYCNCDTIGTEDGICDKETGACLCKPGFSGSRCD 636
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRK 146
C +N Y G CK C CN GS CD G C A +SR
Sbjct: 637 ECSLNFY--GYPYCKECGCNAPGS--KLAECDRKNGDCSCYANFTSR------------- 679
Query: 147 NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF 205
D +D CK +G G + C++ G+C CKP G++CD+C N Y+F
Sbjct: 680 KCDRCAAGFYDFPNCKPCSCLTIGSKG---MTCDNNGQCYCKPNFQGERCDQCKTNFYNF 736
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQC 245
C+ C CNP G V CD V+ C CK +V G C
Sbjct: 737 --PICEECNCNPKGVVAGFAGCDKVEPGELCTCKTHVAGRIC 776
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + C++C +Y C C+C IGS + C++ G+C CKP G++CD+
Sbjct: 672 CYANFTSRKCDRCAAGFYDFPN---CKPCSCLTIGSKGMTCDNNGQCYCKPNFQGERCDQ 728
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C N Y+F C+ C CNP G V CD V+ G+ + + GR+
Sbjct: 729 CKTNFYNF--PICEECNCNPKGVVAGFAGCDKVEPGELCTCKTHVAGRI----------- 775
Query: 148 FDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 200
D WDL+ D G LN +C+ E G+C CK V G +CD+C
Sbjct: 776 CDQCKPTYWDLQYYHEDGCVRCDCNLAGTLSGLN-ECSIEGGQCNCKRHVVGRRCDKCAD 834
Query: 201 NHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ + GC++C C+ G++ CD GQC C+ + G +C
Sbjct: 835 GFFQLKVHNQFGCQACNCDVGGALG--AGCDMQTGQCRCRPRITGQKC 880
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 106/282 (37%), Gaps = 81/282 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY--------------- 45
CNCNG S C G C DC+ D G +CE CR +
Sbjct: 1840 CNCNGHSGSC---------DSTTGICFDCEHDTFGDHCEFCRVGFYGDAIKGGPYSCLPC 1890
Query: 46 ---YQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 99
Y +NF T+C + G L C CK G T D C+RCDV ++ A
Sbjct: 1891 PCPYATDTNNFATSCQVSETGLLE-------SCFCKKGYTSDHCERCDVGYHGQPTAVDG 1943
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
C C+CN + +C + G C L++ H E
Sbjct: 1944 SCHKCDCNNNNDLSVDGSCHPITGDCYLC-LNNTDGAHCE-------------------- 1982
Query: 160 RCKRDTYPLGHGGSLNL---------QC------NSEGRCQCKPGVTGDKCDRCDVNHYD 204
CK P +G ++ QC N GRC+C V G+KCDRC +N +
Sbjct: 1983 HCK----PWFYGDAVEAKNCTDCACNQCGSSLCDNRSGRCECLANVEGEKCDRCVMNAWG 2038
Query: 205 FGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F GC+ C C A S +P CD+ GQC C G C
Sbjct: 2039 FMRCHGCEMCNCALASS---SPQCDAETGQCSCMPGAAGQMC 2077
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 96/197 (48%), Gaps = 25/197 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G C C + DG +CE C+ +Y GD CT C CN GS +L N GRC+C
Sbjct: 1967 GDCYLCLNNTDGAHCEHCKPWFY---GDAVEAKNCTDCACNQCGS-SLCDNRSGRCECLA 2022
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G+KCDRC +N + F GC+ C C A S +P CD+ GQC S + G++
Sbjct: 2023 NVEGEKCDRCVMNAWGFMRCHGCEMCNCALASS---SPQCDAETGQC-SCMPGAAGQM-C 2077
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDR 197
E+ N+ P G D C+ D S+ C+ + G+C C+ G TG +CD+
Sbjct: 2078 EICEYGYWNYGPTGCSKCD---CEADL-------SMGTVCDVNTGQCHCQEGATGPRCDQ 2127
Query: 198 CDVNHYDFGEAGCKSCE 214
C + GC+ C+
Sbjct: 2128 CASQYLRIPNFGCRLCD 2144
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 45/196 (22%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN-----LQCNSEGRCQCKPGVTG 83
C+ + G C++C+ N+Y C CNCNP G + + C CK V G
Sbjct: 717 CKPNFQGERCDQCKTNFYNFP---ICEECNCNPKGVVAGFAGCDKVEPGELCTCKTHVAG 773
Query: 84 DKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQC------------ESA 128
CD+C ++D + E GC C+CN AG++ C GQC + A
Sbjct: 774 RICDQCKPTYWDLQYYHEDGCVRCDCNLAGTLSGLNECSIEGGQCNCKRHVVGRRCDKCA 833
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCK 187
+ +VH + Q+ C D GG+L C+ + G+C+C+
Sbjct: 834 DGFFQLKVHNQFGCQA----------------CNCDV-----GGALGAGCDMQTGQCRCR 872
Query: 188 PGVTGDKCDRCDVNHY 203
P +TG KCDR NHY
Sbjct: 873 PRITGQKCDRPIENHY 888
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 111/315 (35%), Gaps = 100/315 (31%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC G S C ++KEL + GG CL+C+ + +G NC KC YY+
Sbjct: 351 CNCYGHSEECVYEKELDRMHSSIDIHGSYDGGGRCLNCRDNTEGINCNKCVFGYYRPRTK 410
Query: 52 NFCTACNCNPI----GSLNLQCNS------------------------------------ 71
+ C P+ L+L NS
Sbjct: 411 WWNETDVCQPVRCSSAYLDLIINSMKVHTLPSKYSYTDSLNGVTRSNETEPSVLGTCVCD 470
Query: 72 -----------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
RC CKP TG CDRC HY CK C+C+ G++ + C
Sbjct: 471 PTKHTGDCEDETARCFCKPQFTGMNCDRCAPGHY--SPPKCKPCDCSVNGTLDGS--CLP 526
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG--------- 171
+ G+C + N+ G + + C L G
Sbjct: 527 INGRCP-----------------CKSNY---GGEL--CQECAPGYTNLTAGCISCNCNEL 564
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ CN S +C CK G CD C + FG A C+ C C+ G+ CD
Sbjct: 565 GSLHNSCNESTAQCICKTNFAGLTCDNCADGY--FGHALCEYCNCDTIGTEDGI--CDKE 620
Query: 231 KGQCECKDNVEGAQC 245
G C CK G++C
Sbjct: 621 TGACLCKPGFSGSRC 635
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 87/216 (40%), Gaps = 35/216 (16%)
Query: 39 EKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
E CR + + + A C C+ GS + C G C C+P + G +CDRC +Y
Sbjct: 1395 EYCRQKVFSLTSEYNMAALPCECSSQGSTSFMCEKYGGECSCRPNIIGRRCDRCAPGYYS 1454
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR-----VQSRKNFDP 150
F + C C+C + CD GQC H E + V +DP
Sbjct: 1455 FPD--CIKCKC------PDNHLCDENTGQCFCPS-------HVEGKHCDSCVPYAFGYDP 1499
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG 209
L C+ + LQC+ + G+C CK V G KCD+C Y F
Sbjct: 1500 -------LIGCQLCGCQQNGSEARQLQCDPDNGQCLCKANVGGRKCDKCLPGFYGFPH-- 1550
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C C G+ + C+S C+CK NV G C
Sbjct: 1551 CYECACEIKGTTEEI--CESTNAACKCKKNVIGENC 1584
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQ-KSGDNF-CTACNCNPIGSLNLQCNSE-GRCQCKP 79
GG C +C+ G C+KC D ++Q K + F C ACNC+ G+L C+ + G+C+C+P
Sbjct: 815 GGQC-NCKRHVVGRRCDKCADGFFQLKVHNQFGCQACNCDVGGALGAGCDMQTGQCRCRP 873
Query: 80 GVTGDKCDRCDVNHY 94
+TG KCDR NHY
Sbjct: 874 RITGQKCDRPIENHY 888
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
QC++E G+C C PG G C+ C+ ++++G GC C+C S+ CD GQC
Sbjct: 2058 QCDAETGQCSCMPGAAGQMCEICEYGYWNYGPTGCSKCDCEADLSMGTV--CDVNTGQCH 2115
Query: 236 CKDNVEGAQC 245
C++ G +C
Sbjct: 2116 CQEGATGPRC 2125
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
RC CKP TG CDRC HY CK C+C+ G++ + C + G+C CK N
Sbjct: 483 ARCFCKPQFTGMNCDRCAPGHY--SPPKCKPCDCSVNGTLDGS--CLPINGRCPCKSNYG 538
Query: 242 GAQCR 246
G C+
Sbjct: 539 GELCQ 543
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS + C G C C+P + G +CDRC +Y F + C C+C + CD
Sbjct: 1421 GSTSFMCEKYGGECSCRPNIIGRRCDRCAPGYYSFPD--CIKCKC------PDNHLCDEN 1472
Query: 231 KGQCECKDNVEGAQCRS 247
GQC C +VEG C S
Sbjct: 1473 TGQCFCPSHVEGKHCDS 1489
>gi|296199228|ref|XP_002746995.1| PREDICTED: laminin subunit alpha-2 isoform 1 [Callithrix jacchus]
Length = 3122
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 115/267 (43%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C G C +C+ + G C++C+ + C CNC
Sbjct: 920 CNANGSFSEICH---------SQTGQC-ECRANVQGRRCDECKPGTFDLQSARGCVPCNC 969
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC +++F E GC +CEC G+ NCD
Sbjct: 970 NSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECAHLGN-----NCD 1024
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
G+C P +C +T+ GH
Sbjct: 1025 PKTGRC----------------------ICPPNTIGEKCSKCAPNTW--GHSITTGCKAC 1060
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G+C C P +G KC C+ H+++ C C+C G+ T
Sbjct: 1061 NCSAVGSLDFQCNVNTGQCNCHPKFSGAKCTECNRGHWNYPH--CNLCDCFLPGTDAATC 1118
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
+ ++ K GQC CK NVEG C
Sbjct: 1119 DLETKKCSCSDKTGQCTCKVNVEGVHC 1145
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDECPAGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCLCNAN 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE VQ R+ CK T+ L
Sbjct: 924 GSFSEI--CHSQTGQCEC-----------RANVQGRR-----------CDECKPGTFDLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECAHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCNCKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C +EG RC C G G C+RC + + C+ CEC+
Sbjct: 1471 CPLISSSNNFSPSCVAEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ P CD V G C
Sbjct: 1531 PYGSLP-VP-CDPVTGFC 1546
>gi|441639931|ref|XP_003268180.2| PREDICTED: laminin subunit beta-1 isoform 1 [Nomascus leucogenys]
Length = 1797
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 109/231 (47%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 346 CNCNEHSSSCHFDMAVYMATGNISGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 405
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDF-GE--AG 100
C C C+P GS N C+S G+C+C+ V G+ CD C YD GE G
Sbjct: 406 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCRLNVEGEHCDVCKEGFYDLSGEDPFG 465
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 466 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 513
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C +E G+C C+P + G +C+ + +Y
Sbjct: 514 DLDGCRPCDCDL-----GGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 559
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 116/314 (36%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 878 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 928
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C ++ + E G
Sbjct: 929 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGYFGNPSEVG 981
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + CD G+C E Q G LR RK
Sbjct: 982 GSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVC 1041
Query: 147 NF---------------DPAGNRIWDLR--------RCKRDTYPLGHGG----------- 172
N+ D A + L RC +T+ L G
Sbjct: 1042 NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAH 1101
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1102 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQST 1159
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1160 GQCVCVEGVEGPRC 1173
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 761 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVIGRTCNRCAPG 820
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV C+ V GQC
Sbjct: 821 TFGFGPSGCKPCECHLQGSVNAF--CNPVTGQC 851
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV C+ V
Sbjct: 790 GSLSSVCDPNGGQCQCRPNVIGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAF--CNPV 847
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 848 TGQCHCFQGVYARQC 862
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 101/275 (36%), Gaps = 85/275 (30%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F +E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 282 CFCYGHASECAPVDGFKEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 338
Query: 50 GDNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN S + S G C C+ G C++C +Y E
Sbjct: 339 NSNACKKCNCNEHSSSCHFDMAVYMATGNISGGVCDDCQHNTMGRNCEQCKPFYYQHPER 398
Query: 100 G------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
C+ C C+PAGS +G C+S S G +
Sbjct: 399 DIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI----------------- 433
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GE--AGC 210
G+C+C+ V G+ CD C YD GE GC
Sbjct: 434 ---------------------------AGQCRCRLNVEGEHCDVCKEGFYDLSGEDPFGC 466
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KSC CNP G++ CDS G C CK V G C
Sbjct: 467 KSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 501
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 100/237 (42%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS+N CN G+C C GV
Sbjct: 800 GGQC-QCRPNVIGRTCNRCAPGTF-GFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGV 857
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 858 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDPVTGECLNCQDYTMG--HNCER 908
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 909 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQL----ACVCDPGYIGS 964
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C ++ + E G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 965 RCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1021
>gi|332868295|ref|XP_001165667.2| PREDICTED: laminin subunit beta-1 isoform 6 [Pan troglodytes]
gi|410267982|gb|JAA21957.1| laminin, beta 1 [Pan troglodytes]
gi|410305334|gb|JAA31267.1| laminin, beta 1 [Pan troglodytes]
Length = 1786
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 395 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C +E G+C C+P + G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 116/314 (36%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C ++ + E G
Sbjct: 918 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGYFGNPSEVG 970
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + CD G+C E Q G LR RK
Sbjct: 971 GSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVC 1030
Query: 147 NF---------------DPAGNRIWDLR--------RCKRDTYPLGHGG----------- 172
N+ D A + L RC +T+ L G
Sbjct: 1031 NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAH 1090
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1091 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQST 1148
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1149 GQCVCVEGVEGPRC 1162
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 102/278 (36%), Gaps = 91/278 (32%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFNEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNPIGSLNLQCN------------SEGRCQ-CKPGVTGDKCDRCDVNHYDF 96
N C CNCN ++ C+ S G C C+ G C++C +Y
Sbjct: 328 NSNACKKCNCN---EHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQH 384
Query: 97 GEAG------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
E C+ C C+PAGS +G C+S S G +
Sbjct: 385 PERDIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI-------------- 422
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
G+C+CK V G+ CD C YD
Sbjct: 423 ------------------------------AGQCRCKLNVEGEHCDVCKEGFYDLSSEDP 452
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GCKSC CNP G++ CDS G C CK V G C
Sbjct: 453 FGCKSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 490
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK CEC+ GSV C+ V GQC
Sbjct: 810 TFGFGPGGCKPCECHLQGSVNAF--CNPVTGQC 840
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK CEC+ GSV C+ V
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPGGCKPCECHLQGSVNAF--CNPV 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 837 TGQCHCFQGVYARQC 851
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 54 CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C C C+ GS+N CN G+C C GV +CDRC H+ F C+ C+CN
Sbjct: 818 CKPCECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGF--PSCQPCQCN----- 870
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK--------RD 164
+ +CD V G+C + Q + G H R + DP R C R
Sbjct: 871 GHADDCDPVTGECLNCQDYTMG--HNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQ 928
Query: 165 TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSV 221
+ + LQ C C PG G +CD C ++ + E G C+ C+C+
Sbjct: 929 FARSCYQDPVTLQL----ACVCDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCHNNIDT 984
Query: 222 KNTPNCDSVKGQC-ECKDNVEGAQCR 246
+ CD G+C +C + EG C+
Sbjct: 985 TDPEACDKETGRCLKCLYHTEGEHCQ 1010
>gi|194678084|ref|XP_001787324.1| PREDICTED: laminin subunit alpha-3 [Bos taurus]
Length = 2117
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 111/259 (42%), Gaps = 61/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G S C++D ++ + GG C++CQ + G NCEKC YY+ G
Sbjct: 499 CNCHGHSTDCYYDPDVERQQASLNIQGLYAGGGVCINCQHNTAGVNCEKCAKGYYRPYGI 558
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + + S GRC C+P GD C+ C +Y F
Sbjct: 559 PVHAPDGCIPCSCHPEHAEDCEQGS-GRCTCRPNFRGDHCEECAAGYYHF---------- 607
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P C + L + + DP I C +
Sbjct: 608 ---------PVCSRIP----------------ILPISTPSPEDPVAGDIIKGCDCNLE-- 640
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G L C+++GRC C+PGV G +CD C Y F C++C+C+ GS + TP
Sbjct: 641 -----GVLPEICDAQGRCLCRPGVGGAQCDACRPGFYSF--PICQACQCSALGSYQ-TP- 691
Query: 227 CDSVKGQCECKDNVEGAQC 245
C V GQCEC+ + G +C
Sbjct: 692 CSPVTGQCECQPGITGQRC 710
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 107/237 (45%), Gaps = 42/237 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ G C+ CR +Y C AC C+ +GS C+ G+C+C+PG+T
Sbjct: 651 GRCL-CRPGVGGAQCDACRPGFYSFP---ICQACQCSALGSYQTPCSPVTGQCECQPGIT 706
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC DF S C+PAG+V DS G C+ ++H E
Sbjct: 707 GQRCDRCLSGASDFPHCQGSSNVCDPAGTV------DSSLGHCQC-------KLHVE--- 750
Query: 143 QSRKNFDPA----GNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTG 192
P+ W+L + D + G + +G C CK V G
Sbjct: 751 ------SPSCSICKPLYWNLAKENPDGCSECRCHVAGTMSGIGECGQLDGDCHCKSHVGG 804
Query: 193 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
D CD C+ ++ ++ GC+ C+C+ G+V TP C G C+C+++V G C+
Sbjct: 805 DSCDTCEDGYFALEKSNYFGCQGCQCDIGGAV--TPVCSGRSGVCQCREHVVGKACQ 859
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 29 CQGDRDGPNCEKCRDNYYQ-------------------KSGDNFCTACNCNPIGSLNLQC 69
C+ + G +CE+C YY + C+CN G L C
Sbjct: 588 CRPNFRGDHCEECAAGYYHFPVCSRIPILPISTPSPEDPVAGDIIKGCDCNLEGVLPEIC 647
Query: 70 NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+++GRC C+PGV G +CD C Y F C++C+C+ GS + TP C V GQCE
Sbjct: 648 DAQGRCLCRPGVGGAQCDACRPGFYSF--PICQACQCSALGSYQ-TP-CSPVTGQCECQP 703
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG 189
+ R L S D C+ + G+++ +S G CQCK
Sbjct: 704 GITGQRCDRCLSGAS------------DFPHCQGSSNVCDPAGTVD---SSLGHCQCKLH 748
Query: 190 VTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V C C +++ + GC C C+ AG++ C + G C CK +V G C
Sbjct: 749 VESPSCSICKPLYWNLAKENPDGCSECRCHVAGTMSGIGECGQLDGDCHCKSHVGGDSC 807
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 89/201 (44%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G+ C+ EG +C C+P V G +C RC Y F CK C C
Sbjct: 1413 CECHPAGATGHPCSPEGGQCPCRPHVIGRQCTRCQTGFYGFPH--CKPCSCG-------R 1463
Query: 116 PNCDSVKGQCESAQLSSRGR-----VHTELRVQSRKNFDPAG-----NRIWDLRRCKRDT 165
C+ G+C L+ R + VH+ +F P N C R
Sbjct: 1464 RLCEETTGRCLCPPLTVRPQCDVCEVHS-------FSFHPLAGCEGCN-------CSRT- 1508
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
G G+ +C+ + G+C+C+P +TG +CDRC Y F E C C C+ G+
Sbjct: 1509 ---GTDGTTTPECDGDHGQCRCRPRITGRQCDRCAPGFYRFPE--CLPCHCSRDGTEPGV 1563
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD G C CK+NV+G +C
Sbjct: 1564 --CDPGTGACLCKENVQGTEC 1582
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 60/152 (39%), Gaps = 30/152 (19%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G CEC+PAG+ + C GQC R H R
Sbjct: 1409 GALPCECHPAGATGHP--CSPEGGQCPC-------RPHVIGR---------------QCT 1444
Query: 160 RCKRDTYPLGH----GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCE 214
RC+ Y H L + GRC C P +CD C+V+ + F AGC+ C
Sbjct: 1445 RCQTGFYGFPHCKPCSCGRRLCEETTGRCLCPPLTVRPQCDVCEVHSFSFHPLAGCEGCN 1504
Query: 215 CNPAGS-VKNTPNCDSVKGQCECKDNVEGAQC 245
C+ G+ TP CD GQC C+ + G QC
Sbjct: 1505 CSRTGTDGTTTPECDGDHGQCRCRPRITGRQC 1536
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 83/211 (39%), Gaps = 41/211 (19%)
Query: 20 TGH-----GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
TGH GG C C+ G C +C+ +Y G C C+C L + GR
Sbjct: 1421 TGHPCSPEGGQC-PCRPHVIGRQCTRCQTGFY---GFPHCKPCSCG----RRLCEETTGR 1472
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGS-VKNTPNCDSVKGQCESAQLSS 132
C C P +CD C+V+ + F AGC+ C C+ G+ TP CD GQC
Sbjct: 1473 CLCPPLTVRPQCDVCEVHSFSFHPLAGCEGCNCSRTGTDGTTTPECDGDHGQCRCRP--- 1529
Query: 133 RGRVHTELRVQSRK--NFDPAGNRIWDLR--RCKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
R+ R+ P R + C RD G+ C+ G C CK
Sbjct: 1530 --------RITGRQCDRCAPGFYRFPECLPCHCSRD-------GTEPGVCDPGTGACLCK 1574
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
V G +C+ C + A GC SC C
Sbjct: 1575 ENVQGTECNMCREGSFYLDPANPKGCTSCFC 1605
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G++ C+ G CQC+ V G
Sbjct: 798 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGAVTPVCSGRSGVCQCREHVVGKA 857
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 858 CQRPENNYY 866
>gi|348545292|ref|XP_003460114.1| PREDICTED: laminin subunit beta-4-like, partial [Oreochromis
niloticus]
Length = 2199
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 106/208 (50%), Gaps = 26/208 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C C+G S+ C FD Y TG GG C DC +R GP CE+CR YQ K +
Sbjct: 268 CKCHGHSDSCHFDAARYKATGGVSGGVCDDCGNNRMGPQCEQCRPFLYQDLQRAKDDPHA 327
Query: 54 CTACNCNPIGSLN-LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNP 108
C CNC+P+GS + QC+S G+C CK V G +CDRC + + AGC++C C+P
Sbjct: 328 CIPCNCDPVGSRDGGQCDSLSGQCVCKENVEGQRCDRCKHGFFSLRQDDPAGCQACRCHP 387
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
GSV +CD + G CE Q++S L Q F GN ++ C D
Sbjct: 388 LGSVG---SCDQLTGTCECDQMAS-----GPLCDQCLPGFWGLGNSVFRCSPCNCDI--- 436
Query: 169 GHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
GG+ C+ E G+C+C P + G +C
Sbjct: 437 --GGAQGHTCSPEDGQCRCLPNMIGRRC 462
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 114/273 (41%), Gaps = 54/273 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG S C G G CL C+ GP+CE+C + YY
Sbjct: 1314 CECNGLSEMC---------DGLTGDCLSCREHTTGPSCERCVEGYYGDPISRQACQLCLC 1364
Query: 47 ---QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAG 100
SG F T+C +P SL L CN C+ G TG CDRC Y A
Sbjct: 1365 PDVLSSGRFFATSCQHDP-QSLRLICN------CQEGHTGVSCDRCSPGFYGDLTLPGAV 1417
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CK C CN + + +C+S G+C ++ G L Q+ K D +
Sbjct: 1418 CKECPCNNNINPDDPNSCNSRTGECLHCLHNTIG-----LHCQNCKPGYYGNALTQDCKE 1472
Query: 161 C---KRDTY----PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKS 212
C +R T PLG +L+ G+C C+ GV G CD C+ +++ A GC+
Sbjct: 1473 CSCDRRGTQVTRCPLGRPCFCDLRT---GQCPCRTGVIGKLCDECEDRYWNLNIASGCQP 1529
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S+ N CD V G+C C G C
Sbjct: 1530 CSCDPVNSISNI--CDKVTGRCPCHPEFGGRHC 1560
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 93
G C++C D Y+ + + C C+C+P+ S++ C+ GRC C P G CD C NH
Sbjct: 1508 GKLCDECEDRYWNLNIASGCQPCSCDPVNSISNICDKVTGRCPCHPEFGGRHCDECRENH 1567
Query: 94 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ + C C+CNP G+ + P+CD +C
Sbjct: 1568 FRNPDLQCIPCDCNPEGTKR--PSCDPETSEC 1597
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C CN IGS+ C+ G CQCK V G CD C + FG GCK C+C+P G
Sbjct: 1215 NGAVLCRCNVIGSIGPSCSKLGGFCQCKANVIGRCCDACAPVTFGFGPEGCKRCDCDPHG 1274
Query: 111 SVKNTPNCDSVKGQC 125
SV CD V GQC
Sbjct: 1275 SVSEL--CDQVSGQC 1287
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 105/261 (40%), Gaps = 65/261 (24%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQ-------K 48
C CNG +++C +++ + G G C+ CQ + G NCE+C+D ++ +
Sbjct: 201 CFCNGHASQCVPMAGVRWDIFTQPGMVHGQCV-CQHNTAGENCERCQDFHHDSPWRPGGE 259
Query: 49 SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
+ C AC C+ G + R + GV+G CD C
Sbjct: 260 GAADICRACKCH--GHSDSCHFDAARYKATGGVSGGVCDDC------------------- 298
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G+ + P C+ QC R + N DP G+R
Sbjct: 299 -GNNRMGPQCE----QCRPFLYQDLQRAKDDPHACIPCNCDPVGSR-------------- 339
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNT 224
GG QC+S G+C CK V G +CDRC + + AGC++C C+P GSV +
Sbjct: 340 -DGG----QCDSLSGQCVCKENVEGQRCDRCKHGFFSLRQDDPAGCQACRCHPLGSVGS- 393
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD + G CEC G C
Sbjct: 394 --CDQLTGTCECDQMASGPLC 412
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 99/236 (41%), Gaps = 28/236 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C+ C + G C C+C+P GS++ C+ G+C C+
Sbjct: 1236 GGFC-QCKANVIGRCCDACAPVTF-GFGPEGCKRCDCDPHGSVSELCDQVSGQCACRSET 1293
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE-- 139
G +CDRC + + F C+SCECN + CD + G C S R HT
Sbjct: 1294 AGQRCDRCQMGFWGF--PSCRSCECNGLSEM-----CDGLTGDCLSC------REHTTGP 1340
Query: 140 --LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR---CQCKPGVTGDK 194
R DP + L C D G + + Q + + C C+ G TG
Sbjct: 1341 SCERCVEGYYGDPISRQACQLCLCP-DVLSSGRFFATSCQHDPQSLRLICNCQEGHTGVS 1399
Query: 195 CDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
CDRC Y A CK C CN + + +C+S G+C C N G C+
Sbjct: 1400 CDRCSPGFYGDLTLPGAVCKECPCNNNINPDDPNSCNSRTGECLHCLHNTIGLHCQ 1455
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
GRC C P G CD C NH+ + C C+CNP G+ + P+CD +C C+ V
Sbjct: 1547 GRCPCHPEFGGRHCDECRENHFRNPDLQCIPCDCNPEGTKR--PSCDPETSECICRAGVT 1604
Query: 242 GAQC 245
G C
Sbjct: 1605 GIFC 1608
>gi|397479940|ref|XP_003811258.1| PREDICTED: laminin subunit beta-1 [Pan paniscus]
Length = 1786
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 395 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C +E G+C C+P + G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 116/314 (36%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C ++ + E G
Sbjct: 918 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGYFGNPSEVG 970
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + CD G+C E Q G LR RK
Sbjct: 971 GSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVC 1030
Query: 147 NF---------------DPAGNRIWDLR--------RCKRDTYPLGHGG----------- 172
N+ D A + L RC +T+ L G
Sbjct: 1031 NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAH 1090
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1091 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQST 1148
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1149 GQCVCVEGVEGPRC 1162
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 102/278 (36%), Gaps = 91/278 (32%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFNEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNPIGSLNLQCN------------SEGRCQ-CKPGVTGDKCDRCDVNHYDF 96
N C CNCN ++ C+ S G C C+ G C++C +Y
Sbjct: 328 NSNACKKCNCN---EHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQH 384
Query: 97 GEAG------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
E C+ C C+PAGS +G C+S S G +
Sbjct: 385 PERDIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI-------------- 422
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
G+C+CK V G+ CD C YD
Sbjct: 423 ------------------------------AGQCRCKLNVEGEHCDVCKEGFYDLSSEDP 452
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GCKSC CNP G++ CDS G C CK V G C
Sbjct: 453 FGCKSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 490
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK CEC+ GSV C+ V GQC
Sbjct: 810 TFGFGPGGCKPCECHLQGSVNAF--CNPVTGQC 840
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK CEC+ GSV C+ V
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPGGCKPCECHLQGSVNAF--CNPV 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 837 TGQCHCFQGVYARQC 851
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 46/216 (21%)
Query: 54 CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C C C+ GS+N CN G+C C GV +CDRC H+ F C+ C+CN
Sbjct: 818 CKPCECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGF--PSCQPCQCN----- 870
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP------------------AGNR 154
+ +CD V G+C + Q + G H R + DP +G +
Sbjct: 871 GHADDCDPVTGECLNCQDYTMG--HNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQ 928
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CK 211
R C +D L + C C PG G +CD C ++ + E G C+
Sbjct: 929 F--ARSCYQDPVTL------------QLACVCDPGYIGSRCDDCASGYFGNPSEVGGSCQ 974
Query: 212 SCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
C+C+ + CD G+C +C + EG C+
Sbjct: 975 PCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1010
>gi|291391313|ref|XP_002712162.1| PREDICTED: laminin, beta 1 [Oryctolagus cuniculus]
Length = 1744
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 105/224 (46%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ N
Sbjct: 332 CNCNEHSGSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNV 391
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 392 CERCTCDPAGSQNEGICDSYTDFSAGLIAGQCRCKLYVEGEHCDVCKEGFYDLSAEDPFG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R Q N + R
Sbjct: 452 CKSCACNPLGTIPGGNPCDSATGYCYCKRLVTGQRCD-----QCLPEHWGLSNDLDGCRP 506
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C++E G+C C+P + G +C+ + +Y
Sbjct: 507 CDCDL-----GGALNNSCSAESGQCSCRPHMIGRQCNEVESGYY 545
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--------GRC 75
G CL C DG CE CR YY + C C CN +G++ CNS G+C
Sbjct: 953 GKCLKCLYHTDGDRCELCRFGYYGDALRQDCRKCVCNSLGTVQDHCNSSDCQCDKATGQC 1012
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N + GC C CN S P+C+ GQC+ G
Sbjct: 1013 LCLPNVIGQNCDRCAANTWQLASGTGCDPCNCNELHSFG--PSCNEFTGQCQCMP-GFGG 1069
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E ++ F G+ + R C D P+G QC+ S G+C C GV G
Sbjct: 1070 RTCSE----CQELF--WGDPDVECRACDCD--PMGIETP---QCDQSTGQCVCVEGVEGP 1118
Query: 194 KCDRC 198
+CD+C
Sbjct: 1119 RCDKC 1123
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G CDRC
Sbjct: 708 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCDRCAPG 767
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK C+C+ GSV CD++ GQC
Sbjct: 768 TFGFGPSGCKPCDCHLQGSVNAF--CDAITGQC 798
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 113/314 (35%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL CQ G NCE+C YY
Sbjct: 825 CQCNGHADDCDLVT---------GQCLGCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPC 875
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L+ C C G G +CD C ++ + E G
Sbjct: 876 PCPDGPGSGRQFAGSCYQDPV-TLQLE------CVCDSGYIGPRCDECASGYFGNPSEVG 928
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRKNFD 149
C+ C+C+ + CD G+C + +L G LR RK
Sbjct: 929 GSCQPCQCHHNIDTTDPEACDKETGKCLKCLYHTDGDRCELCRFGYYGDALRQDCRKCVC 988
Query: 150 PAGNRIWDL--------------------------RRCKRDTYPLGHGG----------- 172
+ + D RC +T+ L G
Sbjct: 989 NSLGTVQDHCNSSDCQCDKATGQCLCLPNVIGQNCDRCAANTWQLASGTGCDPCNCNELH 1048
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1049 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPMGI--ETPQCDQST 1106
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1107 GQCVCVEGVEGPRC 1120
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G CDRC + FG +GCK C+C+ GSV CD++
Sbjct: 737 GSLSSVCDPNGGQCQCRPNVVGRTCDRCAPGTFGFGPSGCKPCDCHLQGSVNAF--CDAI 794
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 795 TGQCHCFQGVYSQQC 809
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 102/275 (37%), Gaps = 85/275 (30%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHCL C+ + G NCE C D Y+ +
Sbjct: 268 CFCYGHASECAPVDGFNEEVEGMVH--GHCL-CRHNTKGLNCELCMDFYHDLPWRPAEGR 324
Query: 50 GDNFCTACNCNP-IGSLNLQCN--------SEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN GS + S G C C+ G C++C +Y E
Sbjct: 325 NSNACKKCNCNEHSGSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPER 384
Query: 100 G------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
C+ C C+PAGS +G C+S S G +
Sbjct: 385 DIRDPNVCERCTCDPAGSQN--------EGICDSYTDFSAGLI----------------- 419
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GC 210
G+C+CK V G+ CD C YD GC
Sbjct: 420 ---------------------------AGQCRCKLYVEGEHCDVCKEGFYDLSAEDPFGC 452
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KSC CNP G++ CDS G C CK V G +C
Sbjct: 453 KSCACNPLGTIPGGNPCDSATGYCYCKRLVTGQRC 487
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C C+C+ GS+N C++ G+C C GV
Sbjct: 747 GGQC-QCRPNVVGRTCDRCAPGTF-GFGPSGCKPCDCHLQGSVNAFCDAITGQCHCFQGV 804
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+C+RC ++ F C+ C+CN + +CD V GQC Q + G H R
Sbjct: 805 YSQQCNRCLPGYWGF--PACQPCQCN-----GHADDCDLVTGQCLGCQDYTTG--HNCER 855
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ-------CNSEGRCQCKPGVTGDK 194
+ DP I C+ P G G + C C G G +
Sbjct: 856 CLAGYYGDPI---IGSGDHCRPCPCPDGPGSGRQFAGSCYQDPVTLQLECVCDSGYIGPR 912
Query: 195 CDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
CD C ++ + E G C+ C+C+ + CD G+C +C + +G +C
Sbjct: 913 CDECASGYFGNPSEVGGSCQPCQCHHNIDTTDPEACDKETGKCLKCLYHTDGDRCE 968
>gi|81866683|sp|Q8K3K1.1|USH2A_RAT RecName: Full=Usherin; AltName: Full=Usher syndrome type IIa
protein homolog; AltName: Full=Usher syndrome type-2A
protein homolog; Flags: Precursor
gi|22212216|gb|AAL78289.1| usherin [Rattus norvegicus]
Length = 1512
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 128/266 (48%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-- 52
C C+G ++ C +D + YNR G GG C DCQ G NCE C+D +Y+ G +
Sbjct: 571 CQCHGHASSCHYDASMDPFPLEYNRGG-GGVCDDCQHHTTGRNCESCQDYFYRPIGADPA 629
Query: 53 ---FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAG---CKS 103
C C+CN G+ N L C+ G +C CK V+G +C RC + Y C+
Sbjct: 630 DPEVCKHCDCNRDGTRNGSLLCDLVGDQCDCKRRVSGRRCFRCHIGFYGLQALDPDCCRP 689
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+CNP+G+V C GQC S + V LR R +F G + LR
Sbjct: 690 CDCNPSGTVDGDITCHHNSGQC-----SCKANV-IGLRCD-RCSF---GFKF--LRSLNA 737
Query: 164 DTYPLGH---GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
D H GS+N C+ G+C CK G +CD C N Y + C+ C+CN AG
Sbjct: 738 DGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLPWSACEVCDCNRAG 797
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ T CD+ GQC CK +V G +C
Sbjct: 798 TQAGT-VCDAETGQCVCKPSVGGRRC 822
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 107/233 (45%), Gaps = 29/233 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCKPGVT 82
DC+ G C +C +Y Q + C C+CNP G+++ + C+ + G+C CK V
Sbjct: 659 DCKRRVSGRRCFRCHIGFYGLQALDPDCCRPCDCNPSGTVDGDITCHHNSGQCSCKANVI 718
Query: 83 GDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G +CDRC + F + GC+ C CN GSV CD + GQC + ++G
Sbjct: 719 GLRCDRCSFG-FKFLRSLNADGCEPCHCNLHGSVNQL--CDPLSGQCVCKK-EAKG---- 770
Query: 139 ELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
LR R+NF ++ C R G C++E G+C CKP V G +C
Sbjct: 771 -LRCDVCRENFYGLPWSACEVCDCNRA------GTQAGTVCDAETGQCVCKPSVGGRRCS 823
Query: 197 RCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C +++ + C C C G+V + CD GQC CK V G +C
Sbjct: 824 ECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCKLGVTGLRCH 876
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 114/249 (45%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ G C +C++ Y+ +++ + C CNC G++N L C+ S G+C CK
Sbjct: 809 GQCV-CKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCK 867
Query: 79 PGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C +C + ++ GC++C+C+ G++ + CD V GQC
Sbjct: 868 LGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLLGS-MCDPVSGQC---------- 916
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPLGHGGSL----------NLQCNS 180
L + R+ RRC + + P G L N CNS
Sbjct: 917 ----LCLPHRQE-----------RRCVQCQPGCYSSPSNATGCLPCLCHTVATKNCICNS 961
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G C C P TG +C ++ F C+ C C+ AG+ T CD+V GQC C
Sbjct: 962 VTGHCYCPDPSTTGLSWHQCQDRYFRFDPLTGRCRPCHCHVAGASNGT--CDAVTGQCFC 1019
Query: 237 KDNVEGAQC 245
K+ V G++C
Sbjct: 1020 KEFVTGSKC 1028
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 20/226 (8%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + + C C+CN GS+N C+ G+C CK G +
Sbjct: 713 CKANVIGLRCDRCSFGFKFLRSLNADGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLR 772
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y + C+ C+CN AG+ T CD+ GQC + S GR +E + +
Sbjct: 773 CDVCRENFYGLPWSACEVCDCNRAGTQAGT-VCDAETGQC-VCKPSVGGRRCSECK-EGY 829
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKCDRCDVNH 202
N + + C++ G++N L C+ S G+C CK GVTG +C +C +
Sbjct: 830 FNLRQNDSHLCLPCNCEKT-------GTVNGSLLCDKSTGQCPCKLGVTGLRCHQCKPHR 882
Query: 203 YDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ GC++C+C+ G++ + CD V GQC C + + +C
Sbjct: 883 FNLTMDNPQGCQACDCDSLGTLLGS-MCDPVSGQCLCLPHRQERRC 927
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C+ + + + DN C AC+C+ +G+L C+ G+C C P
Sbjct: 866 CKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLLGSMCDPVSGQCLCLPHRQER 925
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C +C Y GC C C+ + KN C+SV G C S+ G + +
Sbjct: 926 RCVQCQPGCYSSPSNATGCLPCLCHTVAT-KNC-ICNSVTGHCYCPDPSTTGLSWHQCQD 983
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
+ + FDP R R C G+ N C++ G+C CK VTG KCD C
Sbjct: 984 RYFR-FDPLTGRC---RPCHCHV-----AGASNGTCDAVTGQCFCKEFVTGSKCDTC 1031
>gi|403266095|ref|XP_003925232.1| PREDICTED: multiple epidermal growth factor-like domains protein 9,
partial [Saimiri boliviensis boliviensis]
Length = 538
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 161 ECQPGYQGLHCETCKEGFYPNYTSGLCQPCDCSPHGALSILCNSSGKCQCKVGVIGSTCD 220
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 221 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEG 271
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + S +++ N SE C QCK G G C+ C+ +Y+F
Sbjct: 272 FYQSPDATKECLRCPCSA--VTSTVSCSIKSNESEPECDQCKDGYIGPNCNTCENGYYNF 329
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 330 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 371
>gi|119603829|gb|EAW83423.1| laminin, beta 1, isoform CRA_a [Homo sapiens]
Length = 1810
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 359 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 418
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 419 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFG 478
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 479 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 526
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C +E G+C C+P + G +C+ + +Y
Sbjct: 527 DLDGCRPCDCDL-----GGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 572
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 108/277 (38%), Gaps = 61/277 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 891 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 941
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C ++ + E G
Sbjct: 942 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGYFGNPSEVG 994
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WD 157
C+ C+C+ + CD G+C + HTE F G+ + D
Sbjct: 995 GSCQPCQCHNNIDTTDPEACDKETGRC------LKCLYHTEGEHCQFCRFGYYGDALQQD 1048
Query: 158 LRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE-A 208
R+C + G++ CN + G+C C P V G CDRC N +
Sbjct: 1049 CRKCV-----CNYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGT 1103
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C CN A S P+C+ GQC+C G C
Sbjct: 1104 GCDPCNCNAAHSFG--PSCNEFTGQCQCMPGFGGRTC 1138
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 774 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 833
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV C+ V GQC
Sbjct: 834 TFGFGPSGCKPCECHLQGSVNAF--CNPVTGQC 864
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 102/278 (36%), Gaps = 91/278 (32%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 295 CFCYGHASECAPVDGFNEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 351
Query: 50 GDNFCTACNCNPIGSLNLQCN------------SEGRCQ-CKPGVTGDKCDRCDVNHYDF 96
N C CNCN ++ C+ S G C C+ G C++C +Y
Sbjct: 352 NSNACKKCNCN---EHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQH 408
Query: 97 GEAG------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
E C+ C C+PAGS +G C+S S G +
Sbjct: 409 PERDIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI-------------- 446
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
G+C+CK V G+ CD C YD
Sbjct: 447 ------------------------------AGQCRCKLNVEGEHCDVCKEGFYDLSSEDP 476
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GCKSC CNP G++ CDS G C CK V G C
Sbjct: 477 FGCKSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 514
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV C+ V
Sbjct: 803 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAF--CNPV 860
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 861 TGQCHCFQGVYARQC 875
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 100/237 (42%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS+N CN G+C C GV
Sbjct: 813 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGV 870
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 871 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDPVTGECLNCQDYTMG--HNCER 921
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 922 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQL----ACVCDPGYIGS 977
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C ++ + E G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 978 RCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1034
>gi|186837|gb|AAA59482.1| laminin B1 [Homo sapiens]
gi|186876|gb|AAA59485.1| laminin B1 [Homo sapiens]
gi|186913|gb|AAA59486.1| laminin B1 [Homo sapiens]
gi|168275776|dbj|BAG10608.1| laminin subunit beta-1 precursor [synthetic construct]
Length = 1786
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 395 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C +E G+C C+P + G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 116/314 (36%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C ++ + E G
Sbjct: 918 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGYFGNPSEVG 970
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + CD G+C E Q G LR RK
Sbjct: 971 GSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVC 1030
Query: 147 NF---------------DPAGNRIWDLR--------RCKRDTYPLGHGG----------- 172
N+ D A + L RC +T+ L G
Sbjct: 1031 NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAH 1090
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1091 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQST 1148
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1149 GQCVCVEGVEGPRC 1162
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV C+ V GQC
Sbjct: 810 TFGFGPSGCKPCECHLQGSVNAF--CNPVTGQC 840
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 102/278 (36%), Gaps = 91/278 (32%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFNEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNPIGSLNLQCN------------SEGRCQ-CKPGVTGDKCDRCDVNHYDF 96
N C CNCN ++ C+ S G C C+ G C++C +Y
Sbjct: 328 NSNACKKCNCN---EHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQH 384
Query: 97 GEAG------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
E C+ C C+PAGS +G C+S S G +
Sbjct: 385 PERDIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI-------------- 422
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
G+C+CK V G+ CD C YD
Sbjct: 423 ------------------------------AGQCRCKLNVEGEHCDVCKEGFYDLSSEDP 452
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GCKSC CNP G++ CDS G C CK V G C
Sbjct: 453 FGCKSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 490
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV C+ V
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAF--CNPV 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 837 TGQCHCFQGVYARQC 851
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 100/237 (42%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS+N CN G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 847 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDPVTGECLNCQDYTMG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQL----ACVCDPGYIGS 953
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C ++ + E G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 954 RCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1010
>gi|301781496|ref|XP_002926164.1| PREDICTED: laminin subunit alpha-2-like [Ailuropoda melanoleuca]
Length = 2541
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 118/267 (44%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN N FS C + RTG C +C+ + G C++C+ + C CNC
Sbjct: 340 CNINSSFSESC------HARTGQ---C-ECKPNVQGRRCDECKPETFGLQSGRGCVPCNC 389
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+ NCD
Sbjct: 390 NSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCD 444
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
GQC P +C +T+ GH
Sbjct: 445 PKTGQC----------------------ICPPNTIGEKCSKCAPNTW--GHSITTGCKAC 480
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G+C C P +G KC C+ H+++ C CEC G+ T
Sbjct: 481 NCSTVGSLDFQCNINTGQCSCHPKFSGAKCTECNRGHWNYPH--CSPCECFLPGTEDRTC 538
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
+ ++ K GQC CK NV+G C
Sbjct: 539 DSETKKCSCIDQTGQCTCKVNVQGVHC 565
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 109/265 (41%), Gaps = 62/265 (23%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 236 NNFSPTCRLDRSL------GLVCDACPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 289
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGS 111
NL + G C CKPG TG C+ C ++ A C+ C CN S
Sbjct: 290 ----NLDFSVPGSCDSLSGSCLICKPGTTGRFCELCADGYFGDAVAAKNCQPCRCNINSS 345
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
+ C + GQCE VQ R+ CK +T+ L G
Sbjct: 346 FSES--CHARTGQCECKP-----------NVQGRR-----------CDECKPETFGLQSG 381
Query: 172 -----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+
Sbjct: 382 RGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN 441
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
NCD GQC C N G +C
Sbjct: 442 -----NCDPKTGQCICPPNTIGEKC 461
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 103/254 (40%), Gaps = 60/254 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G CL+C+ GP C KC +Y +NF C + SL
Sbjct: 191 GECLNCKNHTGGPYCNKCLPGFYGDPTKGTSEDCQPCACPLNIPSNNFSPTCRLD--RSL 248
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDS 120
L C++ C G TG +C+RC + FG+ C+ C+CN +CDS
Sbjct: 249 GLVCDA-----CPVGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSVPGSCDS 301
Query: 121 VKGQCESAQLSSRGRVHTEL-------RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
+ G C + + GR EL + KN P RC ++ S
Sbjct: 302 LSGSCLICKPGTTGR-FCELCADGYFGDAVAAKNCQPC--------RCNINS-------S 345
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVK 231
+ C++ G+C+CKP V G +CD C + GC C CN GS + +C+
Sbjct: 346 FSESCHARTGQCECKPNVQGRRCDECKPETFGLQSGRGCVPCNCNSFGS--KSFDCEE-S 402
Query: 232 GQCECKDNVEGAQC 245
GQC C+ V G +C
Sbjct: 403 GQCWCQPGVTGKKC 416
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 105/269 (39%), Gaps = 68/269 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F +E G C CQ G C++C Y+ Q+ G CTAC+
Sbjct: 387 CNCNSFGSKSFDCEE-------SGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACD 435
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + G+C C P G+KC +C N + GCK+C C+ GS+
Sbjct: 436 CSHLGN---NCDPKTGQCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDF-- 490
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH------ 170
C+ GQC S G TE C R + H
Sbjct: 491 QCNINTGQC-SCHPKFSGAKCTE---------------------CNRGHWNYPHCSPCEC 528
Query: 171 --GGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
G+ + C+SE G+C CK V G CDRC + GC +C C
Sbjct: 529 FLPGTEDRTCDSETKKCSCIDQTGQCTCKVNVQGVHCDRCRSGTFGLDAKNPLGCSNCYC 588
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
A T C KG ++ Q
Sbjct: 589 FGA-----TTQCSEAKGLIRTWVTLKPEQ 612
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C G CE+C Y S C C C+P GSL + C+S G C C+PG T
Sbjct: 914 CTACPRGYAGQYCERCAPGYTGSPSSPGGSCQECECDPHGSLPVPCDSITGLCTCRPGAT 973
Query: 83 GDKCDRCDVNH 93
G KCD C+ H
Sbjct: 974 GQKCDGCEHWH 984
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 60/138 (43%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C D E C +CQ G CE+C YY + N C C
Sbjct: 840 CQCNGHSSLC--DPE-------TSKCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQQCA 890
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C +EG RC C G G C+RC + + C+ CEC+
Sbjct: 891 CPLISSSNNFSPSCVTEGLDDYRCTACPRGYAGQYCERCAPGYTGSPSSPGGSCQECECD 950
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ P CDS+ G C
Sbjct: 951 PHGSLP-VP-CDSITGLC 966
>gi|167614504|ref|NP_002282.2| laminin subunit beta-1 precursor [Homo sapiens]
gi|317373377|sp|P07942.2|LAMB1_HUMAN RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin B1
chain; AltName: Full=Laminin-1 subunit beta; AltName:
Full=Laminin-10 subunit beta; AltName: Full=Laminin-12
subunit beta; AltName: Full=Laminin-2 subunit beta;
AltName: Full=Laminin-6 subunit beta; AltName:
Full=Laminin-8 subunit beta; Flags: Precursor
gi|51095145|gb|EAL24388.1| laminin, beta 1 [Homo sapiens]
gi|109731041|gb|AAI13456.1| Laminin, beta 1 [Homo sapiens]
gi|119603830|gb|EAW83424.1| laminin, beta 1, isoform CRA_b [Homo sapiens]
Length = 1786
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 395 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C +E G+C C+P + G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 108/277 (38%), Gaps = 61/277 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C ++ + E G
Sbjct: 918 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGYFGNPSEVG 970
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WD 157
C+ C+C+ + CD G+C + HTE F G+ + D
Sbjct: 971 GSCQPCQCHNNIDTTDPEACDKETGRC------LKCLYHTEGEHCQFCRFGYYGDALQQD 1024
Query: 158 LRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE-A 208
R+C + G++ CN + G+C C P V G CDRC N +
Sbjct: 1025 CRKCV-----CNYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGT 1079
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C CN A S P+C+ GQC+C G C
Sbjct: 1080 GCDPCNCNAAHSFG--PSCNEFTGQCQCMPGFGGRTC 1114
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV C+ V GQC
Sbjct: 810 TFGFGPSGCKPCECHLQGSVNAF--CNPVTGQC 840
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 102/278 (36%), Gaps = 91/278 (32%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFNEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNPIGSLNLQCN------------SEGRCQ-CKPGVTGDKCDRCDVNHYDF 96
N C CNCN ++ C+ S G C C+ G C++C +Y
Sbjct: 328 NSNACKKCNCN---EHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQH 384
Query: 97 GEAG------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
E C+ C C+PAGS +G C+S S G +
Sbjct: 385 PERDIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI-------------- 422
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
G+C+CK V G+ CD C YD
Sbjct: 423 ------------------------------AGQCRCKLNVEGEHCDVCKEGFYDLSSEDP 452
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GCKSC CNP G++ CDS G C CK V G C
Sbjct: 453 FGCKSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 490
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV C+ V
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAF--CNPV 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 837 TGQCHCFQGVYARQC 851
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 100/237 (42%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS+N CN G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 847 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDPVTGECLNCQDYTMG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQL----ACVCDPGYIGS 953
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C ++ + E G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 954 RCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1010
>gi|355564586|gb|EHH21086.1| Beta-netrin, partial [Macaca mulatta]
gi|355786422|gb|EHH66605.1| Beta-netrin, partial [Macaca fascicularis]
Length = 616
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 320 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 379
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 380 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 439
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 440 --AGS------CDPITGDCSSS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 483
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G S L G+C+CK + G+ C + +
Sbjct: 484 --------GFSALLH---SGKCECKEQILGNAKAFCGMKY 512
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 404 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 450
>gi|348041325|ref|NP_742045.2| usherin isoform 2 [Rattus norvegicus]
Length = 1551
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 128/266 (48%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-- 52
C C+G ++ C +D + YNR G GG C DCQ G NCE C+D +Y+ G +
Sbjct: 610 CQCHGHASSCHYDASMDPFPLEYNRGG-GGVCDDCQHHTTGRNCESCQDYFYRPIGADPA 668
Query: 53 ---FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAG---CKS 103
C C+CN G+ N L C+ G +C CK V+G +C RC + Y C+
Sbjct: 669 DPEVCKHCDCNRDGTRNGSLLCDLVGDQCDCKRRVSGRRCFRCHIGFYGLQALDPDCCRP 728
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+CNP+G+V C GQC S + V LR R +F G + LR
Sbjct: 729 CDCNPSGTVDGDITCHHNSGQC-----SCKANV-IGLRCD-RCSF---GFKF--LRSLNA 776
Query: 164 DTYPLGH---GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
D H GS+N C+ G+C CK G +CD C N Y + C+ C+CN AG
Sbjct: 777 DGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLPWSACEVCDCNRAG 836
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ T CD+ GQC CK +V G +C
Sbjct: 837 TQAGT-VCDAETGQCVCKPSVGGRRC 861
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 107/233 (45%), Gaps = 29/233 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCKPGVT 82
DC+ G C +C +Y Q + C C+CNP G+++ + C+ + G+C CK V
Sbjct: 698 DCKRRVSGRRCFRCHIGFYGLQALDPDCCRPCDCNPSGTVDGDITCHHNSGQCSCKANVI 757
Query: 83 GDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G +CDRC + F + GC+ C CN GSV CD + GQC + ++G
Sbjct: 758 GLRCDRCSFG-FKFLRSLNADGCEPCHCNLHGSVNQL--CDPLSGQCVCKK-EAKG---- 809
Query: 139 ELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
LR R+NF ++ C R G C++E G+C CKP V G +C
Sbjct: 810 -LRCDVCRENFYGLPWSACEVCDCNRA------GTQAGTVCDAETGQCVCKPSVGGRRCS 862
Query: 197 RCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C +++ + C C C G+V + CD GQC CK V G +C
Sbjct: 863 ECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCKLGVTGLRCH 915
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 114/249 (45%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ G C +C++ Y+ +++ + C CNC G++N L C+ S G+C CK
Sbjct: 848 GQCV-CKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCK 906
Query: 79 PGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C +C + ++ GC++C+C+ G++ + CD V GQC
Sbjct: 907 LGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLLGS-MCDPVSGQC---------- 955
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPLGHGGSL----------NLQCNS 180
L + R+ RRC + + P G L N CNS
Sbjct: 956 ----LCLPHRQE-----------RRCVQCQPGCYSSPSNATGCLPCLCHTVATKNCICNS 1000
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G C C P TG +C ++ F C+ C C+ AG+ T CD+V GQC C
Sbjct: 1001 VTGHCYCPDPSTTGLSWHQCQDRYFRFDPLTGRCRPCHCHVAGASNGT--CDAVTGQCFC 1058
Query: 237 KDNVEGAQC 245
K+ V G++C
Sbjct: 1059 KEFVTGSKC 1067
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 20/226 (8%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + + C C+CN GS+N C+ G+C CK G +
Sbjct: 752 CKANVIGLRCDRCSFGFKFLRSLNADGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLR 811
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y + C+ C+CN AG+ T CD+ GQC + S GR +E + +
Sbjct: 812 CDVCRENFYGLPWSACEVCDCNRAGTQAGT-VCDAETGQC-VCKPSVGGRRCSECK-EGY 868
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKCDRCDVNH 202
N + + C++ G++N L C+ S G+C CK GVTG +C +C +
Sbjct: 869 FNLRQNDSHLCLPCNCEKT-------GTVNGSLLCDKSTGQCPCKLGVTGLRCHQCKPHR 921
Query: 203 YDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ GC++C+C+ G++ + CD V GQC C + + +C
Sbjct: 922 FNLTMDNPQGCQACDCDSLGTLLGS-MCDPVSGQCLCLPHRQERRC 966
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C+ + + + DN C AC+C+ +G+L C+ G+C C P
Sbjct: 905 CKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLLGSMCDPVSGQCLCLPHRQER 964
Query: 85 KCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C +C Y GC C C+ + KN C+SV G C S+ G + +
Sbjct: 965 RCVQCQPGCYSSPSNATGCLPCLCHTVAT-KNC-ICNSVTGHCYCPDPSTTGLSWHQCQD 1022
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
+ + FDP R R C G+ N C++ G+C CK VTG KCD C
Sbjct: 1023 RYFR-FDPLTGRC---RPCHCHV-----AGASNGTCDAVTGQCFCKEFVTGSKCDTC 1070
>gi|3449310|dbj|BAA32470.1| MEGF9 [Homo sapiens]
Length = 375
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 16/216 (7%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CDRC +Y
Sbjct: 5 GLHCETCKEGFYLNYTSGLCQPCDCSPHGALSIPCNSSGKCQCKVGVIGSICDRCQDGYY 64
Query: 95 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
F + GC C+CN + +CD++ G C + Q +S+G H E + ++ F + +
Sbjct: 65 GFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEGFYQSPDA 115
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKS 212
+ RC + GS +++ + E C QCK G G C++C+ +Y+F ++ C+
Sbjct: 116 TKECLRCPCSA--VTSTGSCSIKSSELEPECDQCKDGYIGPNCNKCENGYYNF-DSICRK 172
Query: 213 CECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
C+C+ VK C G+C C N G C
Sbjct: 173 CQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 208
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS-GDNFCTACNCNPI---GSLNLQCNS-EGRC-QC 77
G CL+CQ + G +CE+C++ +YQ C C C+ + GS +++ + E C QC
Sbjct: 88 GACLNCQENSKGNHCEECKEGFYQSPDATKECLRCPCSAVTSTGSCSIKSSELEPECDQC 147
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECN-PAGSVKNTPNCDSVKGQC 125
K G G C++C+ +Y+F ++ C+ C+C+ VK C G+C
Sbjct: 148 KDGYIGPNCNKCENGYYNF-DSICRKCQCHGHVDPVKTPKICKPESGEC 195
>gi|403282030|ref|XP_003932468.1| PREDICTED: laminin subunit alpha-2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 3120
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 115/267 (43%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C G C +C+ + G C++C+ + C CNC
Sbjct: 922 CNANGSFSEICH---------SQTGQC-ECRANVQGQRCDECKPGTFGLQLARGCVPCNC 971
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC +++F E GC +CEC G+ NCD
Sbjct: 972 NSFGSKSFDCEENGQCWCQPGVTGKKCDRCTHGYFNFQEGGCTACECAHLGN-----NCD 1026
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
G+C P +C +T+ GH
Sbjct: 1027 PKTGRC----------------------ICPPNTIGEKCSKCAPNTW--GHSITTGCKAC 1062
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G+C C P +G KC C+ H+++ C C+C G+ T
Sbjct: 1063 NCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECNRGHWNYPR--CNLCDCFLPGTDATTC 1120
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
+ ++ K GQC CK NVEG C
Sbjct: 1121 DLETKKCSCSDQTGQCTCKVNVEGVHC 1147
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 818 NNFSPTCHLDRSL------GLICDECPAGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 871
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 872 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCLCNAN 925
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R CK T+ L
Sbjct: 926 GSFSEI--CHSQTGQCEC-----RANVQ--------------GQRC---DECKPGTFGLQ 961
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC
Sbjct: 962 LARGCVPCNCNSFGSKSFDCEENGQCWCQPGVTGKKCDRCTHGYFNFQEGGCTACECAHL 1021
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1022 GN-----NCDPKTGRCICPPNTIGEKC 1043
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 108/249 (43%), Gaps = 50/249 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G CL+C+ GP C+KC +Y +NF C+ + SL
Sbjct: 773 GECLNCKDHTGGPFCDKCLPGFYGDPTKGTSEDCQPCACPLNIPSNNFSPTCHLD--RSL 830
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDS 120
L C+ +C G TG +C+RC + FG+ C+ C+CN +CDS
Sbjct: 831 GLICD-----ECPAGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIPGSCDS 883
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP--LGHGGSLNLQC 178
+ G C + + GR + EL G+ + D + C+ P GS + C
Sbjct: 884 LSGSCLICKPGTTGR-YCELCADGY-----FGDAV-DAKNCQ----PCLCNANGSFSEIC 932
Query: 179 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+S+ G+C+C+ V G +CD C + A GC C CN GS + +C+ GQC C
Sbjct: 933 HSQTGQCECRANVQGQRCDECKPGTFGLQLARGCVPCNCNSFGS--KSFDCEE-NGQCWC 989
Query: 237 KDNVEGAQC 245
+ V G +C
Sbjct: 990 QPGVTGKKC 998
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 80/225 (35%), Gaps = 64/225 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1030 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1088
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C+ H+++ C C+C G+ T + ++ K C
Sbjct: 1089 GAKCTECNRGHWNYPR--CNLCDCFLPGTDATTCDLETKKCSCS---------------- 1130
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
+ G+C CK V G CDRC
Sbjct: 1131 ------------------------------------DQTGQCTCKVNVEGVHCDRCRPGK 1154
Query: 203 YDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+ GC SC C T C +G + ++ Q
Sbjct: 1155 FGLDAKNPLGCSSCYC-----FGTTTQCSEAEGLIRTRVTLKAEQ 1194
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1496 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1555
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1556 GRKCDGCKHWH 1566
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 440 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCNCKEN 493
Query: 240 VEGAQC 245
VEG C
Sbjct: 494 VEGGDC 499
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1422 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1472
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C +EG RC C G G C+RC + + C+ CEC+
Sbjct: 1473 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1532
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1533 PYGSLPVP--CDPVTGFC 1548
>gi|426357537|ref|XP_004046094.1| PREDICTED: laminin subunit beta-1 [Gorilla gorilla gorilla]
Length = 1786
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKLFYYQHPERDIRDPNF 394
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 395 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C +E G+C C+P + G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 116/314 (36%), Gaps = 87/314 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C ++ + E G
Sbjct: 918 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGYFGNPSEVG 970
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + CD G+C E Q G LR RK
Sbjct: 971 GSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALRQDCRKCVC 1030
Query: 147 NF---------------DPAGNRIWDLR--------RCKRDTYPLGHGG----------- 172
N+ D A + L RC +T+ L G
Sbjct: 1031 NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAH 1090
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S CN G+CQC PG G C C + + C++C+C+P G TP CD
Sbjct: 1091 SFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQST 1148
Query: 232 GQCECKDNVEGAQC 245
GQC C + VEG +C
Sbjct: 1149 GQCVCVEGVEGPRC 1162
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV C+ V GQC
Sbjct: 810 TFGFGPSGCKPCECHLQGSVNAF--CNPVTGQC 840
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 103/278 (37%), Gaps = 91/278 (32%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFNEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNPIGSLNLQCN------------SEGRCQ-CKPGVTGDKCDRCDVNHYDF 96
N C CNCN ++ C+ S G C C+ G C++C + +Y
Sbjct: 328 NSNACKKCNCN---EHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKLFYYQH 384
Query: 97 GEAG------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
E C+ C C+PAGS +G C+S S G +
Sbjct: 385 PERDIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI-------------- 422
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
G+C+CK V G+ CD C YD
Sbjct: 423 ------------------------------AGQCRCKLNVEGEHCDVCKEGFYDLSSEDP 452
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GCKSC CNP G++ CDS G C CK V G C
Sbjct: 453 FGCKSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 490
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV C+ V
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAF--CNPV 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 837 TGQCHCFQGVYARQC 851
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 100/237 (42%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS+N CN G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 847 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDPVTGECLNCQDYTMG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQL----ACVCDPGYIGS 953
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C ++ + E G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 954 RCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1010
>gi|403282028|ref|XP_003932467.1| PREDICTED: laminin subunit alpha-2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 3124
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 115/267 (43%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C G C +C+ + G C++C+ + C CNC
Sbjct: 922 CNANGSFSEICH---------SQTGQC-ECRANVQGQRCDECKPGTFGLQLARGCVPCNC 971
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC +++F E GC +CEC G+ NCD
Sbjct: 972 NSFGSKSFDCEENGQCWCQPGVTGKKCDRCTHGYFNFQEGGCTACECAHLGN-----NCD 1026
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
G+C P +C +T+ GH
Sbjct: 1027 PKTGRC----------------------ICPPNTIGEKCSKCAPNTW--GHSITTGCKAC 1062
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G+C C P +G KC C+ H+++ C C+C G+ T
Sbjct: 1063 NCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECNRGHWNYPR--CNLCDCFLPGTDATTC 1120
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
+ ++ K GQC CK NVEG C
Sbjct: 1121 DLETKKCSCSDQTGQCTCKVNVEGVHC 1147
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 818 NNFSPTCHLDRSL------GLICDECPAGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 871
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 872 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCLCNAN 925
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R CK T+ L
Sbjct: 926 GSFSEI--CHSQTGQCEC-----RANVQ--------------GQRC---DECKPGTFGLQ 961
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC
Sbjct: 962 LARGCVPCNCNSFGSKSFDCEENGQCWCQPGVTGKKCDRCTHGYFNFQEGGCTACECAHL 1021
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1022 GN-----NCDPKTGRCICPPNTIGEKC 1043
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 108/249 (43%), Gaps = 50/249 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G CL+C+ GP C+KC +Y +NF C+ + SL
Sbjct: 773 GECLNCKDHTGGPFCDKCLPGFYGDPTKGTSEDCQPCACPLNIPSNNFSPTCHLD--RSL 830
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDS 120
L C+ +C G TG +C+RC + FG+ C+ C+CN +CDS
Sbjct: 831 GLICD-----ECPAGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIPGSCDS 883
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP--LGHGGSLNLQC 178
+ G C + + GR + EL G+ + D + C+ P GS + C
Sbjct: 884 LSGSCLICKPGTTGR-YCELCADGY-----FGDAV-DAKNCQ----PCLCNANGSFSEIC 932
Query: 179 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+S+ G+C+C+ V G +CD C + A GC C CN GS + +C+ GQC C
Sbjct: 933 HSQTGQCECRANVQGQRCDECKPGTFGLQLARGCVPCNCNSFGS--KSFDCEE-NGQCWC 989
Query: 237 KDNVEGAQC 245
+ V G +C
Sbjct: 990 QPGVTGKKC 998
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 80/225 (35%), Gaps = 64/225 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1030 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1088
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C+ H+++ C C+C G+ T + ++ K C
Sbjct: 1089 GAKCTECNRGHWNYPR--CNLCDCFLPGTDATTCDLETKKCSCS---------------- 1130
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
+ G+C CK V G CDRC
Sbjct: 1131 ------------------------------------DQTGQCTCKVNVEGVHCDRCRPGK 1154
Query: 203 YDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+ GC SC C T C +G + ++ Q
Sbjct: 1155 FGLDAKNPLGCSSCYC-----FGTTTQCSEAEGLIRTRVTLKAEQ 1194
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1496 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1555
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1556 GRKCDGCKHWH 1566
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 440 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCNCKEN 493
Query: 240 VEGAQC 245
VEG C
Sbjct: 494 VEGGDC 499
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1422 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1472
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C +EG RC C G G C+RC + + C+ CEC+
Sbjct: 1473 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1532
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1533 PYGSLPVP--CDPVTGFC 1548
>gi|47220594|emb|CAG05620.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1873
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 116/267 (43%), Gaps = 57/267 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y +G+ GG C C + G CE+CR Y+Q N
Sbjct: 310 CNCNQHSDSCHFDMAVYLASGNVSGGVCDSCLHNTVGNQCEQCRPFYFQHPERDIRDPNI 369
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGC 101
C AC+C+P GSLN G+C+CK V G++CDRC HY G+ GC
Sbjct: 370 CEACDCDPAGSLNGGICDRMTDVRAGLIAGQCRCKANVEGERCDRCRDAHYGLGDHPEGC 429
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
K + + P + C+ S + T P GN
Sbjct: 430 KGVKTHTTRQTGAKPRPFTSPSPCDRIPACSCSPLGTL----------PGGN-------- 471
Query: 162 KRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPA 218
C+SE G C CK VTG CD+C H+ +GC+ C+C+
Sbjct: 472 ---------------PCDSETGSCFCKRLVTGRNCDQCVDEHWGLSNDMSGCRPCDCDLG 516
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ N CD V GQC C+D++ G +C
Sbjct: 517 GAINN--QCDQVSGQCVCRDHMFGRRC 541
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 87/186 (46%), Gaps = 25/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSEGR 74
G CL C +GP CE C+ YY + + C C CN +GS C S G+
Sbjct: 1051 GECLLCLHHSEGPACESCKLGYYGNATLSDCRRCVCNALGSDPSACPAPNDCHCERSSGQ 1110
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C+C P V G C++C N ++ GC+ C C+P S P+C+ + GQC S +
Sbjct: 1111 CRCLPNVIGQHCNQCAANTWNMASGGGCEPCSCHPDHSYG--PSCNEISGQC-SCRPGFG 1167
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
GR +E R+ F GN + C D G+ QCN + GRC C GV+G
Sbjct: 1168 GRTCSE----CRELF--WGNPEAECHACDCDPR-----GTAEPQCNKANGRCVCVEGVSG 1216
Query: 193 DKCDRC 198
+CD C
Sbjct: 1217 PRCDVC 1222
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 40 KCRDNYY----QKSGDNFCTACNC-NPIGSLNLQCNS--------EGRCQCKPGVTGDKC 86
+C D YY SGD +C C C + GSL S + C C G G +C
Sbjct: 953 RCLDGYYGDPVLGSGD-YCRPCMCPDGPGSLRQFAGSCYRGDGSQQATCICDTGYKGARC 1011
Query: 87 DRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
D C +Y + GEAG C+ C CN V + +CDS G+C S G ++
Sbjct: 1012 DECSPGYYGNPGEAGGQCQPCRCNGNIDVLDPGSCDSRSGECLLCLHHSEGPACESCKLG 1071
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN------SEGRCQCKPGVTGDKCDR 197
N + D RRC + LG S N S G+C+C P V G C++
Sbjct: 1072 YYGN-----ATLSDCRRCVCNA--LGSDPSACPAPNDCHCERSSGQCRCLPNVIGQHCNQ 1124
Query: 198 CDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C N ++ GC+ C C+P S P+C+ + GQC C+ G C
Sbjct: 1125 CAANTWNMASGGGCEPCSCHPDHSYG--PSCNEISGQCSCRPGFGGRTC 1171
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S C C+P G+L+ C++ G +CQC+P V G CDRC
Sbjct: 749 PMADICRNYIFSISAMLHQGVKECQCDPQGALSTVCDASGGQCQCRPNVVGRNCDRCAPA 808
Query: 93 HYDFGEAGCK 102
+ FG GC+
Sbjct: 809 TFQFGPNGCR 818
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G C C + EA C +C+C+P G+ + P C+ G+C C + V
Sbjct: 1158 GQCSCRPGFGGRTCSECRELFWGNPEAECHACDCDPRGTAE--PQCNKANGRCVCVEGVS 1215
Query: 242 GAQC 245
G +C
Sbjct: 1216 GPRC 1219
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 101/277 (36%), Gaps = 111/277 (40%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNP------------IGS 64
GHC+ C + G NCE+C D ++ + N C CNCN + S
Sbjct: 271 GHCM-CNHNTKGLNCEQCEDFHHDLPWRPAEGRNTNACKRCNCNQHSDSCHFDMAVYLAS 329
Query: 65 LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPN 117
N+ S G C C G++C++C ++ E C++C+C+PAGS+ N
Sbjct: 330 GNV---SGGVCDSCLHNTVGNQCEQCRPFYFQHPERDIRDPNICEACDCDPAGSL-NGGI 385
Query: 118 CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ 177
CD R+ D+R G +
Sbjct: 386 CD----------------------------------RMTDVR-----------AGLI--- 397
Query: 178 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCK------------------------ 211
G+C+CK V G++CDRC HY G+ GCK
Sbjct: 398 ---AGQCRCKANVEGERCDRCRDAHYGLGDHPEGCKGVKTHTTRQTGAKPRPFTSPSPCD 454
Query: 212 ---SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C+P G++ CDS G C CK V G C
Sbjct: 455 RIPACSCSPLGTLPGGNPCDSETGSCFCKRLVTGRNC 491
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
G+L+ C++ G +CQC+P V G CDRC + FG GC+
Sbjct: 778 GALSTVCDASGGQCQCRPNVVGRNCDRCAPATFQFGPNGCR 818
>gi|281339899|gb|EFB15483.1| hypothetical protein PANDA_015781 [Ailuropoda melanoleuca]
Length = 2487
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 118/267 (44%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN N FS C + RTG C +C+ + G C++C+ + C CNC
Sbjct: 292 CNINSSFSESC------HARTGQ---C-ECKPNVQGRRCDECKPETFGLQSGRGCVPCNC 341
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+ NCD
Sbjct: 342 NSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCD 396
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
GQC P +C +T+ GH
Sbjct: 397 PKTGQC----------------------ICPPNTIGEKCSKCAPNTW--GHSITTGCKAC 432
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G+C C P +G KC C+ H+++ C CEC G+ T
Sbjct: 433 NCSTVGSLDFQCNINTGQCSCHPKFSGAKCTECNRGHWNYPH--CSPCECFLPGTEDRTC 490
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
+ ++ K GQC CK NV+G C
Sbjct: 491 DSETKKCSCIDQTGQCTCKVNVQGVHC 517
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 109/265 (41%), Gaps = 62/265 (23%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 188 NNFSPTCRLDRSL------GLVCDACPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 241
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGS 111
NL + G C CKPG TG C+ C ++ A C+ C CN S
Sbjct: 242 ----NLDFSVPGSCDSLSGSCLICKPGTTGRFCELCADGYFGDAVAAKNCQPCRCNINSS 297
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
+ C + GQCE VQ R+ CK +T+ L G
Sbjct: 298 FSES--CHARTGQCECKP-----------NVQGRR-----------CDECKPETFGLQSG 333
Query: 172 -----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+
Sbjct: 334 RGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN 393
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
NCD GQC C N G +C
Sbjct: 394 -----NCDPKTGQCICPPNTIGEKC 413
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 103/254 (40%), Gaps = 60/254 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G CL+C+ GP C KC +Y +NF C + SL
Sbjct: 143 GECLNCKNHTGGPYCNKCLPGFYGDPTKGTSEDCQPCACPLNIPSNNFSPTCRLD--RSL 200
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDS 120
L C++ C G TG +C+RC + FG+ C+ C+CN +CDS
Sbjct: 201 GLVCDA-----CPVGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSVPGSCDS 253
Query: 121 VKGQCESAQLSSRGRVHTEL-------RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
+ G C + + GR EL + KN P RC ++ S
Sbjct: 254 LSGSCLICKPGTTGR-FCELCADGYFGDAVAAKNCQPC--------RCNINS-------S 297
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVK 231
+ C++ G+C+CKP V G +CD C + GC C CN GS + +C+
Sbjct: 298 FSESCHARTGQCECKPNVQGRRCDECKPETFGLQSGRGCVPCNCNSFGS--KSFDCEE-S 354
Query: 232 GQCECKDNVEGAQC 245
GQC C+ V G +C
Sbjct: 355 GQCWCQPGVTGKKC 368
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 105/269 (39%), Gaps = 68/269 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F +E G C CQ G C++C Y+ Q+ G CTAC+
Sbjct: 339 CNCNSFGSKSFDCEE-------SGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACD 387
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + G+C C P G+KC +C N + GCK+C C+ GS+
Sbjct: 388 CSHLGN---NCDPKTGQCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDF-- 442
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH------ 170
C+ GQC S G TE C R + H
Sbjct: 443 QCNINTGQC-SCHPKFSGAKCTE---------------------CNRGHWNYPHCSPCEC 480
Query: 171 --GGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
G+ + C+SE G+C CK V G CDRC + GC +C C
Sbjct: 481 FLPGTEDRTCDSETKKCSCIDQTGQCTCKVNVQGVHCDRCRSGTFGLDAKNPLGCSNCYC 540
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
A T C KG ++ Q
Sbjct: 541 FGA-----TTQCSEAKGLIRTWVTLKPEQ 564
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C G CE+C Y S C C C+P GSL + C+S G C C+PG T
Sbjct: 866 CTACPRGYAGQYCERCAPGYTGSPSSPGGSCQECECDPHGSLPVPCDSITGLCTCRPGAT 925
Query: 83 GDKCDRCDVNH 93
G KCD C+ H
Sbjct: 926 GQKCDGCEHWH 936
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 60/138 (43%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C D E C +CQ G CE+C YY + N C C
Sbjct: 792 CQCNGHSSLC--DPE-------TSKCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQQCA 842
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C +EG RC C G G C+RC + + C+ CEC+
Sbjct: 843 CPLISSSNNFSPSCVTEGLDDYRCTACPRGYAGQYCERCAPGYTGSPSSPGGSCQECECD 902
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ P CDS+ G C
Sbjct: 903 PHGSLP-VP-CDSITGLC 918
>gi|119607870|gb|EAW87464.1| hCG28560, isoform CRA_a [Homo sapiens]
Length = 654
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 277 ECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPHGALSIPCNSSGKCQCKVGVIGSICD 336
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 337 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEG 387
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ + E C QCK G G C++C+ +Y+F
Sbjct: 388 FYQSPDATKECLRCPCSA--VTSTGSCSIKSSELEPECDQCKDGYIGPNCNKCENGYYNF 445
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 446 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 487
>gi|297275088|ref|XP_001095558.2| PREDICTED: laminin subunit alpha-3 isoform 3 [Macaca mulatta]
Length = 3307
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 124/271 (45%), Gaps = 42/271 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 356 CNCHGHASDCYYDSDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C V +Y+F C
Sbjct: 416 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAVGYYNF-----PFCLK 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-----RVQSRKNFDPAGNRIWDLRRC 161
P V D V G + G V E+ R R + G R D R
Sbjct: 470 IPIFPVSTPSPEDPVAGDIRGCDCNPEG-VLPEICDAHGRCLCRPGVE--GPRC-DTCRS 525
Query: 162 KRDTYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
++P+ GS + C+S G+C+C+PGVTG +CDRC YDF S
Sbjct: 526 GFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSA 585
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PAG++ DS G C CK +VEG C
Sbjct: 586 CDPAGTI------DSNLGSCPCKLHVEGPTC 610
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 111/242 (45%), Gaps = 52/242 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 507 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ DS G C ++H E
Sbjct: 563 GQRCDRCLSGAYDFPHCQGSSSACDPAGTI------DSNLGSCPC-------KLHVE--- 606
Query: 143 QSRKNFDPA----GNRIWDLRR----------CKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
P W+L + C + G G +C +G C CK
Sbjct: 607 ------GPTCSICKPLYWNLDKENPNGCSECQCHKAGTVSGTG-----ECRQGDGDCHCK 655
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
V GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G
Sbjct: 656 SHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSV--CSGPSGVCQCREHVVGKA 713
Query: 245 CR 246
C+
Sbjct: 714 CQ 715
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 29 CQGDRDGPNCEKCRDNYY--------------------QKSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCEKC YY +GD C+CNP G L
Sbjct: 445 CKPNFHGDNCEKCAVGYYNFPFCLKIPIFPVSTPSPEDPVAGD--IRGCDCNPEGVLPEI 502
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C++ GRC C+PGV G +CD C Y F C++C C+ GS + C SV GQCE
Sbjct: 503 CDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP--CSSVTGQCECR 558
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
+ R D + +D C+ + G+++ ++ G C CK
Sbjct: 559 PGVTGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTID---SNLGSCPCKL 603
Query: 189 GVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C C +++ + GC C+C+ AG+V T C G C CK +V G C
Sbjct: 604 HVEGPTCSICKPLYWNLDKENPNGCSECQCHKAGTVSGTGECRQGDGDCHCKSHVGGDSC 663
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ + C+ EG +C C+P V G +C RC HY
Sbjct: 1224 NSARSLVAFYHKGA----LPCECHPAGATSPHCSPEGGQCPCRPNVIGRQCTRCATGHYG 1279
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG--- 152
F CK C C C+ + GQC + R + E+ +F P
Sbjct: 1280 FPH--CKPCSCG-------LRLCEEMTGQCRCPPRTVRPQC--EVCETHSFSFHPMAGCE 1328
Query: 153 --NRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG 209
N C R G + LQC+ + G+C+CKP +TG +CDRC Y F E
Sbjct: 1329 GCN-------CSRR----GTSEAAMLQCDRDSGQCRCKPRITGRQCDRCASGFYRFPE-- 1375
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C CN G+ CD G C CK+NVEG +C
Sbjct: 1376 CVPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1409
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1661 CNCNGHSNRC---------QDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCP 1711
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1712 HTNRFATGCVVNGGDVRCSCKAGYTGIQCERCAPGYFGNPQKFG-GSCQPCSCNNNGQLG 1770
Query: 114 NTPNCDSVKGQC 125
+CD + G C
Sbjct: 1771 ---SCDPLTGDC 1779
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGS---LNLQCNSE-GRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ G+ LQC+ + G+C+CKP +TG +CDRC
Sbjct: 1309 PQCEVCETHSFSFHPMAGCEGCNCSRRGTSEAAMLQCDRDSGQCRCKPRITGRQCDRCAS 1368
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1369 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1398
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 104/259 (40%), Gaps = 55/259 (21%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN--------------PIGSLNL 67
CQ G C++C Y Q+ + C ACNC+ SLN
Sbjct: 321 CQHHTCGETCDRCCTGYNQRRWQPAAWEQSHECEACNCHGHASDCYYDSDVERQQASLNT 380
Query: 68 QCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNC 118
Q G C+ G C++C +Y +G GC C C+P ++ C
Sbjct: 381 QGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDP----EHADGC 436
Query: 119 DSVKGQC--------ESAQLSSRGRVH----TELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ G+C ++ + + G + ++ + P D+R C D
Sbjct: 437 EQGSGRCHCKPNFHGDNCEKCAVGYYNFPFCLKIPIFPVSTPSPEDPVAGDIRGC--DCN 494
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
P G L C++ GRC C+PGV G +CD C Y F C++C C+ GS +
Sbjct: 495 P---EGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP-- 547
Query: 227 CDSVKGQCECKDNVEGAQC 245
C SV GQCEC+ V G +C
Sbjct: 548 CSSVTGQCECRPGVTGQRC 566
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 654 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSVCSGPSGVCQCREHVVGKA 713
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 714 CQRPENNYY 722
>gi|395534919|ref|XP_003769481.1| PREDICTED: laminin subunit alpha-2 [Sarcophilus harrisii]
Length = 3100
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 118/266 (44%), Gaps = 61/266 (22%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C G C +C+ + G C++C+ + C CNC
Sbjct: 887 CNLNGSFSEICH---------TQTGQC-ECKPNVQGLRCDECQPQTFGLQSSQGCVPCNC 936
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGV G KCDRC ++F E GC SCEC G+ NCD
Sbjct: 937 NSFGSKSFDCEESGQCWCQPGVAGKKCDRCAHGFFNFQEGGCTSCECAHLGN-----NCD 991
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY--PLGHG----- 171
G+C N I D +C +++ + HG
Sbjct: 992 PNTGKCICPP-----------------------NTIGDKCDKCAPNSWGHSIIHGCKACN 1028
Query: 172 ----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
GS + QCN + G+C C P +G KC C++ H+++ C C+C AG+ +T +
Sbjct: 1029 CSLVGSFDFQCNINTGQCSCHPEFSGRKCSECNLGHWNYPH--CDVCDCFLAGTDASTCS 1086
Query: 227 CDSVK-------GQCECKDNVEGAQC 245
++ K GQC CK NVEG C
Sbjct: 1087 SETGKCACLNQSGQCTCKVNVEGVHC 1112
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 107/271 (39%), Gaps = 74/271 (27%)
Query: 4 NGFSNRCFFD--KELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNC 59
N FS C D +EL C +C GP CE+C + Y+ + C C C
Sbjct: 783 NNFSPTCHLDWSRELI--------CDECPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQC 834
Query: 60 NPIGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECN 107
N NL + G C CKPG +G C+RC + FG+A C+ C CN
Sbjct: 835 ND----NLDFSIPGSCDSLSGSCLICKPGTSGRYCERCADGY--FGDAVDAKNCQPCRCN 888
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR--RCKRDT 165
GS C + GQCE + LR C+ T
Sbjct: 889 LNGSFSEI--CHTQTGQCECKP------------------------NVQGLRCDECQPQT 922
Query: 166 YPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
+ L GS + C G+C C+PGV G KCDRC ++F E GC SCE
Sbjct: 923 FGLQSSQGCVPCNCNSFGSKSFDCEESGQCWCQPGVAGKKCDRCAHGFFNFQEGGCTSCE 982
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C G+ NCD G+C C N G +C
Sbjct: 983 CAHLGN-----NCDPNTGKCICPPNTIGDKC 1008
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 65/140 (46%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + +R GG C++C + G NCE C D +++ G
Sbjct: 312 CNCHGKAEECYYDENVASRNLSLNIHGKYIGGGVCINCTQNTTGINCETCIDGFFRPKGI 371
Query: 51 -DNF---CTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C C+PIGSLN C + G C CK G G +CDRC +
Sbjct: 372 LPNYPRPCQPCYCDPIGSLNEICVKDENHARRGLFPGSCHCKHGFGGVRCDRCARGYT-- 429
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G C C C+ GS P
Sbjct: 430 GYPDCVPCNCSGIGSTNEDP 449
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 105/247 (42%), Gaps = 46/247 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC-------NPIGSLNLQCNSEG 73
G C+ C+ GP C +C +Y K C C C N + +L + E
Sbjct: 738 GECVGCKDHTGGPYCNRCLPGFYGDPTKGTTEDCHPCACPLNIPSNNFSPTCHLDWSREL 797
Query: 74 RC-QCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C +C G TG +C+RC + FG+ C+ C+CN +CDS+ G C
Sbjct: 798 ICDECPVGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSGSCLI 855
Query: 128 AQLSSRGRV-------HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+ + GR + V + KN P RC + GS + C++
Sbjct: 856 CKPGTSGRYCERCADGYFGDAVDA-KNCQPC--------RCNLN-------GSFSEICHT 899
Query: 181 E-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G+C+CKP V G +CD C + + GC C CN GS + +C+ GQC C+
Sbjct: 900 QTGQCECKPNVQGLRCDECQPQTFGLQSSQGCVPCNCNSFGS--KSFDCEE-SGQCWCQP 956
Query: 239 NVEGAQC 245
V G +C
Sbjct: 957 GVAGKKC 963
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 97/232 (41%), Gaps = 47/232 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F +E G C CQ G C++C ++ Q+ G CT+C
Sbjct: 934 CNCNSFGSKSFDCEE-------SGQCW-CQPGVAGKKCDRCAHGFFNFQEGG---CTSCE 982
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPN 117
C +G+ N N+ G+C C P GDKCD+C N + GCK+C C+ GS
Sbjct: 983 CAHLGN-NCDPNT-GKCICPPNTIGDKCDKCAPNSWGHSIIHGCKACNCSLVGSFDF--Q 1038
Query: 118 CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNL 176
C+ GQC S GR +E + W+ C D + G S
Sbjct: 1039 CNINTGQC-SCHPEFSGRKCSECNLGH-----------WNYPHCDVCDCFLAGTDAS--- 1083
Query: 177 QCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
C+SE G+C CK V G CDRC + GC SC C
Sbjct: 1084 TCSSETGKCACLNQSGQCTCKVNVEGVHCDRCRPGKFGLDAKNPLGCSSCYC 1135
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 60/143 (41%), Gaps = 34/143 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG SN C + + C +CQ G CE+C YY K N C C
Sbjct: 1387 CQCNGHSNTCDPETSI---------CQNCQHHTAGDFCERCAIGYYGTVKGLPNDCRQCA 1437
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAG--------CK 102
C I S N C SEG RC C G G C+RC FG G C+
Sbjct: 1438 CPLITSSNNFSPSCISEGLNDYRCTACPRGYEGQYCERC-----AFGYTGSPSSPGGSCQ 1492
Query: 103 SCECNPAGSVKNTPNCDSVKGQC 125
CEC+P GS+ P CD V G C
Sbjct: 1493 ECECDPYGSLP-VP-CDPVTGYC 1513
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1461 CTACPRGYEGQYCERCAFGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGYCTCRPGAT 1520
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1521 GQKCDGCKPGH 1531
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G +CDRC + G C C C+ GS N D G C CK+NVE
Sbjct: 408 GSCHCKHGFGGVRCDRCARGYT--GYPDCVPCNCSGIGST----NEDPCIGPCYCKENVE 461
Query: 242 GAQC 245
G C
Sbjct: 462 GRDC 465
>gi|189217425|ref|NP_001121189.1| laminin subunit alpha-3 isoform 3 precursor [Homo sapiens]
gi|34452239|gb|AAQ72571.1| laminin alpha 3 splice variant b2 [Homo sapiens]
Length = 3277
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 127/271 (46%), Gaps = 42/271 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 356 CNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C + +Y+F C
Sbjct: 416 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAIGYYNF-----PFCLR 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-----RVQSRKNFDPAGNRIWDLRRC 161
P V + D V G + + G V E+ R R + G R D R
Sbjct: 470 IPIFPVSTPSSEDPVAGDIKGCDCNLEG-VLPEICDAHGRCLCRPGVE--GPRC-DTCRS 525
Query: 162 KRDTYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
++P+ GS + C+S G+C+C+PGVTG +CDRC YDF S
Sbjct: 526 GFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSA 585
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PAG++ +S G C+CK +VEG C
Sbjct: 586 CDPAGTI------NSNLGYCQCKLHVEGPTC 610
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 44/238 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 507 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ +S G C+ ++H E
Sbjct: 563 GQRCDRCLSGAYDFPHCQGSSSACDPAGTI------NSNLGYCQC-------KLHVEGPT 609
Query: 143 QSRKNFDPAGNRIWDLR----------RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
SR W+L +C + G G +C +G C CK V
Sbjct: 610 CSRCKL-----LYWNLDKENPSGCSECKCHKAGTVSGTG-----ECRQGDGDCHCKSHVG 659
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 660 GDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSM--CSGPSGVCQCREHVVGKVCQ 715
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 105/240 (43%), Gaps = 44/240 (18%)
Query: 29 CQGDRDGPNCEKCRDNYY--------------------QKSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCEKC YY +GD C+CN G L
Sbjct: 445 CKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGD--IKGCDCNLEGVLPEI 502
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C++ GRC C+PGV G +CD C Y F C++C C+ GS + C SV GQCE
Sbjct: 503 CDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP--CSSVTGQCECR 558
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
+ R D + +D C+ + G++N ++ G CQCK
Sbjct: 559 PGVTGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTIN---SNLGYCQCKL 603
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C RC + +++ + +GC C+C+ AG+V T C G C CK +V G C
Sbjct: 604 HVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSC 663
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 90/225 (40%), Gaps = 55/225 (24%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ EG +C C+P V G +C RC HY
Sbjct: 1250 NSARSLVAFYHKGA----LPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYG 1305
Query: 96 FGEAGCKSCECNPAGSVKNTPNCD----SVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
F CK C C + T C +V+ QCE + S +F P
Sbjct: 1306 FPR--CKPCSCGRRLCEEMTGQCRCPPRTVRPQCEVCETHSF-------------SFHPM 1350
Query: 152 -----------GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
G + C RD+ G+C+CKP +TG +CDRC
Sbjct: 1351 AGCEGCNCSRRGTIEAAMPECDRDS----------------GQCRCKPRITGRQCDRCAS 1394
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F E C C CN G+ CD G C CK+NVEG +C
Sbjct: 1395 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1435
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SN+C G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1687 CNCNGHSNQC---------QDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCP 1737
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1738 HTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 1796
Query: 114 NTPNCDSVKGQC 125
+C + G C
Sbjct: 1797 ---SCHPLTGDC 1805
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 103/264 (39%), Gaps = 63/264 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN--------------PIGSLN 66
+CQ G C++C Y Q+ + C ACNC+ SLN
Sbjct: 320 ECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASNCYYDPDVERQQASLN 379
Query: 67 LQCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPN 117
Q G C+ G C++C +Y +G GC C C+P ++
Sbjct: 380 TQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDP----EHADG 435
Query: 118 CDSVKGQ-----------CESAQLSSRG-----RVHTELRVQSRKNFDPAGNRIWDLRRC 161
C+ G+ CE + R+ V + + DP D++ C
Sbjct: 436 CEQGSGRCHCKPNFHGDNCEKCAIGYYNFPFCLRIPI-FPVSTPSSEDPVAG---DIKGC 491
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+ G L C++ GRC C+PGV G +CD C Y F C++C C+ GS
Sbjct: 492 DCNL-----EGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSY 544
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ C SV GQCEC+ V G +C
Sbjct: 545 QMP--CSSVTGQCECRPGVTGQRC 566
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ G++ G+C+CKP +TG +CDRC
Sbjct: 1335 PQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCAS 1394
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1395 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1424
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 654 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKV 713
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 714 CQRPENNYY 722
>gi|355753070|gb|EHH57116.1| hypothetical protein EGM_06689, partial [Macaca fascicularis]
Length = 444
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 17/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 68 ECRPGYQGLHCETCKEGFYPNYTSGLCQPCDCSPHGALSILCNSSGKCQCKVGVIGSTCD 127
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 128 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQ-NSKGN-HCE---ECKEG 177
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ + E C QCK G G C++C+ +Y+F
Sbjct: 178 FYQSPDATKECLRCPCSA--VTSTGSCSIKSSELEPECDQCKDGYMGPNCNKCENGYYNF 235
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C +C N G C
Sbjct: 236 -DSICRKCQCHGHVDPVKTPKICKPESGECIDCLHNTTGFWCE 277
>gi|332221166|ref|XP_003259732.1| PREDICTED: netrin-4 isoform 1 [Nomascus leucogenys]
gi|441626862|ref|XP_004089194.1| PREDICTED: netrin-4 isoform 2 [Nomascus leucogenys]
Length = 591
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 295 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 354
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 355 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 414
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 415 --AGS------CDPISGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 458
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK + G+ C + +
Sbjct: 459 ------GFSALLH-----SGKCECKEQILGNAKAFCGMKY 487
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 379 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPISGDC 425
>gi|194227359|ref|XP_001915680.1| PREDICTED: LOW QUALITY PROTEIN: usherin [Equus caballus]
Length = 5202
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 130/263 (49%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--- 52
C CN S C +D + + G GG C DC+ + G NCE C+D ++++ G +
Sbjct: 573 CQCNSHSRSCHYDISVDPFPFEHHRGGGGVCDDCEHNTTGKNCELCKDYFFRQVGADPSA 632
Query: 53 --FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C C+C+ G+ N L C+ G +C CK V+G +C++C Y+ E GC SC
Sbjct: 633 IDVCKPCDCDKAGTRNRSLLCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQEWDPDGCSSC 692
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + H + ++F+ G C+
Sbjct: 693 NCNTSGTVDGDVTCHPNSGQCKCKANVIGLRCDHCNFGFKFLRSFNDDG-----CEPCQC 747
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS+N CN G+C+CK G +CD C + Y + CK+C+C+ AGSV
Sbjct: 748 NVH-----GSVNKLCNPLSGQCECKKEAKGLQCDTCREHFYGLDISSCKACDCDAAGSVP 802
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ CD+ GQC CK NV G QC
Sbjct: 803 GS-VCDAATGQCVCKPNVGGRQC 824
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 56/251 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C D Y+ +N C CNC+ G++N L C+ S G+C CK
Sbjct: 811 GQCV-CKPNVGGRQCNECLDRYFYLRQNNSFLCLPCNCDSRGTVNGSLLCDKSTGQCPCK 869
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG C++C+ + Y+ GC+ CEC+ G++ T CD + GQC
Sbjct: 870 LGVTGLHCNQCEPHRYNLTIGNFQGCQMCECDSLGTLPGT-ICDPISGQC---------- 918
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L + +R+ RRC + + + G G+++ CNS
Sbjct: 919 ----LCLPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTAGAVSHICNS 963
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G CD C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 964 LTGQCICQDASLAGQSCDHCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1021
Query: 237 KDNVEGAQCRS 247
K V G++C S
Sbjct: 1022 KRFVTGSKCDS 1032
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 116/237 (48%), Gaps = 30/237 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCNS-EGRCQC 77
GG C +C+ G C +C++ +Y Q+ + C++CNCN G+++ + C+ G+C+C
Sbjct: 657 GGQC-NCKRHVSGRQCNQCQNGFYNLQEWDPDGCSSCNCNTSGTVDGDVTCHPNSGQCKC 715
Query: 78 KPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G +CD C+ F + GC+ C+CN GSV C+ + GQCE + ++G
Sbjct: 716 KANVIGLRCDHCNFGFKFLRSFNDDGCEPCQCNVHGSVNKL--CNPLSGQCECKK-EAKG 772
Query: 135 RVHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC--NSEGRCQCKPGVT 191
L+ + R++F G I + C D GS+ + G+C CKP V
Sbjct: 773 -----LQCDTCREHF--YGLDISSCKACDCDA-----AGSVPGSVCDAATGQCVCKPNVG 820
Query: 192 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +C+ C ++ + C C C+ G+V + CD GQC CK V G C
Sbjct: 821 GRQCNECLDRYFYLRQNNSFLCLPCNCDSRGTVNGSLLCDKSTGQCPCKLGVTGLHC 877
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 88/187 (47%), Gaps = 24/187 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G +C +C + Y + NF C C C+ +G+L C+ G+C C P G
Sbjct: 868 CKLGVTGLHCNQCEPHRYNLTIGNFQGCQMCECDSLGTLPGTICDPISGQCLCLPNRQGR 927
Query: 85 KCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQC--ESAQLSSRGRVHTEL 140
+C++C Y G A GC C C+ AG+V + C+S+ GQC + A L+ + H +
Sbjct: 928 RCNQCQPGFYISPGNATGCLPCSCHTAGAVSHI--CNSLTGQCICQDASLAGQSCDHCK- 984
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC- 198
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 985 --DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKRFVTGSKCDSCV 1034
Query: 199 -DVNHYD 204
+H D
Sbjct: 1035 PSASHLD 1041
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G +C+ C+D+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 966 GQCICQDASLAGQSCDHCKDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKR 1023
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1024 FVTGSKCDSCVPSASHLD 1041
>gi|410960038|ref|XP_003986604.1| PREDICTED: laminin subunit alpha-2 [Felis catus]
Length = 3205
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 108/239 (45%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C++C+ + C CNCN GS + C G+C C+PGV G KCD
Sbjct: 1021 ECKPNVQGLRCDECKPETFGLQSGRGCVPCNCNSFGSKSFDCEESGQCWCQPGVAGKKCD 1080
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +C+C+ G+ NCD GQC
Sbjct: 1081 RCAHGYFNFQEGGCTACDCSHLGN-----NCDPKTGQC---------------------- 1113
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCNS-EGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN+ G+C C P +G
Sbjct: 1114 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNTNTGQCNCHPKFSGA 1171
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C+ H+++ C CEC G+ + T + ++ K GQC CK +VEG +C
Sbjct: 1172 KCTECNRGHWNYPH--CSPCECFLPGTDERTCDSETKKCSCMDQTGQCTCKVHVEGVRC 1228
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 110/269 (40%), Gaps = 70/269 (26%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 899 NNFSPTCHLDRSL------GLICDACPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 952
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 953 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNVN 1006
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR--RCKRDTYP 167
S+ + C + GQCE + LR CK +T+
Sbjct: 1007 SSLSES--CHARTGQCECKP------------------------NVQGLRCDECKPETFG 1040
Query: 168 LGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
L G GS + C G+C C+PGV G KCDRC +++F E GC +C+C+
Sbjct: 1041 LQSGRGCVPCNCNSFGSKSFDCEESGQCWCQPGVAGKKCDRCAHGYFNFQEGGCTACDCS 1100
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD GQC C N G +C
Sbjct: 1101 HLGN-----NCDPKTGQCICPPNTIGEKC 1124
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 427 CNCHGKAEECYYDENVARRNLSLNIHGKYIGGGVCVNCTQNTAGINCETCIDGFFRPKGV 486
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CKPG G CDRC +
Sbjct: 487 SPNYPRPCQPCHCDPIGSLNDVCVKDEKHARRGLAPGSCPCKPGFRGVSCDRCARGYT-- 544
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK C C+ AGS P
Sbjct: 545 GYPDCKPCNCSGAGSANEDP 564
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN+ G+C C P +
Sbjct: 1111 GQCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNTNTGQCNCHPKFS 1169
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C+ H+++ C CEC G+ + T CDS +C
Sbjct: 1170 GAKCTECNRGHWNYPH--CSPCECFLPGTDERT--CDSETKKC 1208
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CKPG G CDRC + G CK C C+ AGS N D G C CK+N
Sbjct: 521 APGSCPCKPGFRGVSCDRCARGYT--GYPDCKPCNCSGAGSA----NEDPCFGPCNCKEN 574
Query: 240 VEGAQC 245
VEG C
Sbjct: 575 VEGGDC 580
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1577 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDPITGLCTCRPGAT 1636
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1637 GRKCDGCKHWH 1647
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY + N C C
Sbjct: 1503 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVRGLPNDCQQCA 1553
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1554 CPLISSSNNFSPSCVMEGLDDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1613
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD + G C
Sbjct: 1614 PYGSLPVP--CDPITGLC 1629
>gi|332849575|ref|XP_001156295.2| PREDICTED: laminin subunit alpha-3 isoform 4 [Pan troglodytes]
Length = 3277
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 127/271 (46%), Gaps = 42/271 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 356 CNCHGHASDCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C + +Y+F C
Sbjct: 416 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAIGYYNF-----PFCLR 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-----RVQSRKNFDPAGNRIWDLRRC 161
P V + D V G + + G V E+ R R + G R D R
Sbjct: 470 IPIFPVSTPSSEDPVAGDIKGCDCNLEG-VLPEICDAHGRCLCRPGVE--GPRC-DTCRS 525
Query: 162 KRDTYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
++P+ GS + C+S G+C+C+PGVTG +CDRC YDF S
Sbjct: 526 GFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSA 585
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PAG++ +S G C+CK +VEG C
Sbjct: 586 CDPAGTI------NSNLGYCQCKLHVEGPTC 610
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 44/238 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 507 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ +S G C+ ++H E
Sbjct: 563 GQRCDRCLSGAYDFPHCQGSSSACDPAGTI------NSNLGYCQC-------KLHVEGPT 609
Query: 143 QSRKNFDPAGNRIWDLR----------RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
SR W+L +C + G G +C +G C CK V
Sbjct: 610 CSRCKL-----LYWNLDKENPSGCSECKCHKAGTVSGTG-----ECRQGDGDCHCKSHVG 659
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 660 GDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSM--CSGPSGVCQCREHVVGKVCQ 715
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 105/240 (43%), Gaps = 44/240 (18%)
Query: 29 CQGDRDGPNCEKCRDNYY--------------------QKSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCEKC YY +GD C+CN G L
Sbjct: 445 CKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGD--IKGCDCNLEGVLPEI 502
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C++ GRC C+PGV G +CD C Y F C++C C+ GS + C SV GQCE
Sbjct: 503 CDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP--CSSVTGQCECR 558
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
+ R D + +D C+ + G++N ++ G CQCK
Sbjct: 559 PGVTGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTIN---SNLGYCQCKL 603
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C RC + +++ + +GC C+C+ AG+V T C G C CK +V G C
Sbjct: 604 HVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSC 663
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 99/249 (39%), Gaps = 50/249 (20%)
Query: 12 FDKELYNRT--GHGGHCLDCQ-GDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ 68
DK L T G LD Q R N + +Y K C C+P G+
Sbjct: 1222 MDKSLEFITNCGKNSFYLDPQTASRFCKNSARSLVAFYHKGA----LPCECHPTGATGPH 1277
Query: 69 CNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C+ EG +C C+P V G +C RC HY F CK C C C+ + GQC
Sbjct: 1278 CSPEGGQCPCQPNVIGRQCTRCATGHYGFPR--CKPCSC-------GWRPCEEMTGQCRC 1328
Query: 128 AQLSSRGRVHTELRVQSRKNFDPA-----------GNRIWDLRRCKRDTYPLGHGGSLNL 176
+ R + E+ +F P G + C RD+
Sbjct: 1329 PPRTVRPQC--EVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDS----------- 1375
Query: 177 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C+CKP +TG +CDRC Y F E C C CN G+ CD G C C
Sbjct: 1376 -----GQCRCKPRITGRQCDRCASGFYRFPE--CVPCNCNRDGTEPGV--CDPGTGACLC 1426
Query: 237 KDNVEGAQC 245
K+NVEG +C
Sbjct: 1427 KENVEGTEC 1435
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE C++ YY + C AC C
Sbjct: 1687 CNCNGHSNRC---------QDGSGICVNCQHNTAGEHCEHCQEGYYGNAVHGSCRACPCP 1737
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1738 HTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 1796
Query: 114 NTPNCDSVKGQC 125
+C + G C
Sbjct: 1797 ---SCHPLTGDC 1805
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 103/264 (39%), Gaps = 63/264 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN--------------PIGSLN 66
+CQ G C++C Y Q+ + C ACNC+ SLN
Sbjct: 320 ECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASDCYYDPDVERQQASLN 379
Query: 67 LQCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPN 117
Q G C+ G C++C +Y +G GC C C+P ++
Sbjct: 380 TQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDP----EHADG 435
Query: 118 CDSVKGQ-----------CESAQLSSRG-----RVHTELRVQSRKNFDPAGNRIWDLRRC 161
C+ G+ CE + R+ V + + DP D++ C
Sbjct: 436 CEQGSGRCHCKPNFHGDNCEKCAIGYYNFPFCLRIPI-FPVSTPSSEDPVAG---DIKGC 491
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+ G L C++ GRC C+PGV G +CD C Y F C++C C+ GS
Sbjct: 492 DCNL-----EGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSY 544
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ C SV GQCEC+ V G +C
Sbjct: 545 QMP--CSSVTGQCECRPGVTGQRC 566
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 654 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKV 713
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 714 CQRPENNYY 722
>gi|350425118|ref|XP_003494017.1| PREDICTED: laminin subunit alpha-1-like [Bombus impatiens]
Length = 3144
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 115/281 (40%), Gaps = 87/281 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP--- 79
G CL+C+G+ +G C+KC+ +Y + C CNC+P+G+ +++C+ + G+C CKP
Sbjct: 808 GRCLECRGNTEGWKCDKCKPAHYGNPLEQNCLPCNCDPLGTSSIECDEKSGQCPCKPLFE 867
Query: 80 -------------------------------------------GVTGDKCDRCDVNHYDF 96
GV G +CD CD++HY
Sbjct: 868 GRDCSSCIEGYGNVTAGCRECDCDVGALDEICDPVTGECRCTEGVLGFRCDHCDIDHYGL 927
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
GC C CNP GS+ T CD V GQC+ ++ R D
Sbjct: 928 STEGCNGCRCNPIGSI--TTACDIVTGQCQCKPHVTGR-------------QCDQCMIGF 972
Query: 156 WDLRRCKRDTYPLGHG---------GSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDF 205
W L P G G G+ N C +S G+C CKPGV G +CD C +Y +
Sbjct: 973 WGL--------PTGAGCAPCGCDPIGAYNSSCHDSIGQCYCKPGVGGTRCDVCLPGYYGY 1024
Query: 206 GEAGCKSCE-CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C+ C G V CD G+C C G C
Sbjct: 1025 SSNGCQVCDSCVRPGHV-----CDPDTGRCVCPTLTFGEHC 1060
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 109/246 (44%), Gaps = 27/246 (10%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG 63
N FS C D +G+ C C G +CE C ++ G+ C P
Sbjct: 743 NNFSPNCQLDDPTDIDSGYV--CTQCPKGYTGDHCESCDIGFF---GNPLIPGGTCEPCF 797
Query: 64 SLNLQCNSE-GRC-QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDS 120
C+ E GRC +C+ G KCD+C HY + E C C C+P G+ ++ CD
Sbjct: 798 CGGGPCDQETGRCLECRGNTEGWKCDKCKPAHYGNPLEQNCLPCNCDPLGT--SSIECDE 855
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
GQC L GR + GN R C D G+L+ C+
Sbjct: 856 KSGQCPCKPLF-EGR-------DCSSCIEGYGNVTAGCRECDCDV------GALDEICDP 901
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C+C GV G +CD CD++HY GC C CNP GS+ T CD V GQC+CK +
Sbjct: 902 VTGECRCTEGVLGFRCDHCDIDHYGLSTEGCNGCRCNPIGSI--TTACDIVTGQCQCKPH 959
Query: 240 VEGAQC 245
V G QC
Sbjct: 960 VTGRQC 965
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 106/231 (45%), Gaps = 43/231 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCD 87
C+ G C++C ++ C C C+PIG+ N C +S G+C CKPGV G +CD
Sbjct: 956 CKPHVTGRQCDQCMIGFWGLPTGAGCAPCGCDPIGAYNSSCHDSIGQCYCKPGVGGTRCD 1015
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
C +Y + GC+ C+ C G V CD G+C L+
Sbjct: 1016 VCLPGYYGYSSNGCQVCDSCVRPGHV-----CDPDTGRCVCPTLTFGEHCD--------- 1061
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHG----------GSLNLQCNSEGRCQCKPGVTGDKCD 196
RC+ ++ L G GS+ QC+ +G+C C+ G G +C+
Sbjct: 1062 -------------RCRSGSWDLVPGVGCRPCACTLGSMKPQCDHQGQCPCRIGYDGLRCE 1108
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVK-NTPNCD-SVKGQCECKDNVEGAQC 245
+C +Y G C+ C CN AG+++ + CD + KGQC CK+ V G QC
Sbjct: 1109 KCAKGYY--GYPRCRPCSCNVAGTLQCDDETCDCNDKGQCPCKEYVVGRQC 1157
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S+ C + GHCL+C+ + GP C+ C D++Y D C C C
Sbjct: 1440 CQCNGRSDICDIET---------GHCLNCRENTAGPRCDICSDSFYGHP-DFGCKPCPCP 1489
Query: 61 PI-----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
+ + N+E C CKPG TG KC+RC +Y F C C CNPAGS+
Sbjct: 1490 QADKRFSNTCMVLANTEAICVCKPGYTGRKCERCSSGYYGFPHLPGGKCIPCNCNPAGSL 1549
Query: 113 KNTPNCDSVKGQC 125
+ CD+ GQC
Sbjct: 1550 ND--ECDTETGQC 1560
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKG 232
+ N+E C CKPG TG KC+RC +Y F C C CNPAGS+ + CD+ G
Sbjct: 1501 VLANTEAICVCKPGYTGRKCERCSSGYYGFPHLPGGKCIPCNCNPAGSLND--ECDTETG 1558
Query: 233 QCECKDNVEGAQC 245
QC C+ G C
Sbjct: 1559 QCRCRAGSTGRDC 1571
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ G CE+C YY C CNCNP GSLN +C++E G+C+C+ G TG
Sbjct: 1511 CKPGYTGRKCERCSSGYYGFPHLPGGKCIPCNCNPAGSLNDECDTETGQCRCRAGSTGRD 1570
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C + + C SC N G + +T
Sbjct: 1571 CSECTAYRHVYINNVCTSCNDNCTGILLDT 1600
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C+G + RC + + HG H G NCEKC+ NYY+ +G C
Sbjct: 284 CVCSGHAARCRYSVQ------HGEHT-------TGINCEKCQVNYYRPNGVAPDDPEPCV 330
Query: 56 ACNCNPIGSLNL---------QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C+CN GS G C CKPG +G KCD+C + F + C C C
Sbjct: 331 PCDCNVHGSTGYCTPDDSYVHIGKVAGACDCKPGYSGYKCDQCAAGYRQFPD--CMPCPC 388
Query: 107 NPAGSV 112
+ G +
Sbjct: 389 DSRGIL 394
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 182 GRC-QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
GRC +C+ G KCD+C HY + E C C C+P G+ ++ CD GQC CK
Sbjct: 808 GRCLECRGNTEGWKCDKCKPAHYGNPLEQNCLPCNCDPLGT--SSIECDEKSGQCPCKPL 865
Query: 240 VEGAQCRS 247
EG C S
Sbjct: 866 FEGRDCSS 873
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-----NLQCNSEGRCQ 76
H G C C+ DG CEKC YY G C C+CN G+L CN +G+C
Sbjct: 1092 HQGQC-PCRIGYDGLRCEKCAKGYY---GYPRCRPCSCNVAGTLQCDDETCDCNDKGQCP 1147
Query: 77 CKPGVTGDKCDRCDVNHYDFG---EAGCKSCEC 106
CK V G +C +C + GC C C
Sbjct: 1148 CKEYVVGRQCGQCKEGTFGLALDNPKGCTECFC 1180
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG +G KCD+C + F + C C C+ G + P+ D +G C CK NV
Sbjct: 357 GACDCKPGYSGYKCDQCAAGYRQFPD--CMPCPCDSRGIL---PSHDC-EGDCLCKANVA 410
Query: 242 GAQC 245
G C
Sbjct: 411 GELC 414
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CN +G + C D + G C DC+ G C++C Y Q C C C+
Sbjct: 334 CNVHGSTGYCTPDDSYVHIGKVAGAC-DCKPGYSGYKCDQCAAGYRQFPD---CMPCPCD 389
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
G L + EG C CK V G+ CD+C H+ + GC C C
Sbjct: 390 SRGILPSH-DCEGDCLCKANVAGELCDQCKPGHFALTKENLDGCLPCYC 437
>gi|38045910|ref|NP_937762.1| laminin subunit alpha-3 isoform 1 precursor [Homo sapiens]
gi|215274012|sp|Q16787.2|LAMA3_HUMAN RecName: Full=Laminin subunit alpha-3; AltName: Full=Epiligrin 170
kDa subunit; Short=E170; AltName: Full=Epiligrin subunit
alpha; AltName: Full=Kalinin subunit alpha; AltName:
Full=Laminin-5 subunit alpha; AltName: Full=Laminin-6
subunit alpha; AltName: Full=Laminin-7 subunit alpha;
AltName: Full=Nicein subunit alpha; Flags: Precursor
gi|34452237|gb|AAQ72570.1| laminin alpha 3 splice variant b1 [Homo sapiens]
gi|225000930|gb|AAI72580.1| Laminin, alpha 3 [synthetic construct]
Length = 3333
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 127/271 (46%), Gaps = 42/271 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 356 CNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C + +Y+F C
Sbjct: 416 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAIGYYNF-----PFCLR 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-----RVQSRKNFDPAGNRIWDLRRC 161
P V + D V G + + G V E+ R R + G R D R
Sbjct: 470 IPIFPVSTPSSEDPVAGDIKGCDCNLEG-VLPEICDAHGRCLCRPGVE--GPRC-DTCRS 525
Query: 162 KRDTYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
++P+ GS + C+S G+C+C+PGVTG +CDRC YDF S
Sbjct: 526 GFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSA 585
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PAG++ +S G C+CK +VEG C
Sbjct: 586 CDPAGTI------NSNLGYCQCKLHVEGPTC 610
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 44/238 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 507 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ +S G C+ ++H E
Sbjct: 563 GQRCDRCLSGAYDFPHCQGSSSACDPAGTI------NSNLGYCQC-------KLHVEGPT 609
Query: 143 QSRKNFDPAGNRIWDLR----------RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
SR W+L +C + G G +C +G C CK V
Sbjct: 610 CSRCKL-----LYWNLDKENPSGCSECKCHKAGTVSGTG-----ECRQGDGDCHCKSHVG 659
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 660 GDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSM--CSGPSGVCQCREHVVGKVCQ 715
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 105/240 (43%), Gaps = 44/240 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQ--------------------KSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCEKC YY +GD C+CN G L
Sbjct: 445 CKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGD--IKGCDCNLEGVLPEI 502
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C++ GRC C+PGV G +CD C Y F C++C C+ GS + C SV GQCE
Sbjct: 503 CDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP--CSSVTGQCECR 558
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
+ R D + +D C+ + G++N ++ G CQCK
Sbjct: 559 PGVTGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTIN---SNLGYCQCKL 603
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C RC + +++ + +GC C+C+ AG+V T C G C CK +V G C
Sbjct: 604 HVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSC 663
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 90/225 (40%), Gaps = 55/225 (24%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ EG +C C+P V G +C RC HY
Sbjct: 1250 NSARSLVAFYHKGA----LPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYG 1305
Query: 96 FGEAGCKSCECNPAGSVKNTPNCD----SVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
F CK C C + T C +V+ QCE + S +F P
Sbjct: 1306 FPR--CKPCSCGRRLCEEMTGQCRCPPRTVRPQCEVCETHSF-------------SFHPM 1350
Query: 152 -----------GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
G + C RD+ G+C+CKP +TG +CDRC
Sbjct: 1351 AGCEGCNCSRRGTIEAAMPECDRDS----------------GQCRCKPRITGRQCDRCAS 1394
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F E C C CN G+ CD G C CK+NVEG +C
Sbjct: 1395 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1435
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SN+C G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1687 CNCNGHSNQC---------QDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCP 1737
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1738 HTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 1796
Query: 114 NTPNCDSVKGQC 125
+C + G C
Sbjct: 1797 ---SCHPLTGDC 1805
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 103/264 (39%), Gaps = 63/264 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN--------------PIGSLN 66
+CQ G C++C Y Q+ + C ACNC+ SLN
Sbjct: 320 ECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASNCYYDPDVERQQASLN 379
Query: 67 LQCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPN 117
Q G C+ G C++C +Y +G GC C C+P ++
Sbjct: 380 TQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDP----EHADG 435
Query: 118 CDSVKGQ-----------CESAQLSSRG-----RVHTELRVQSRKNFDPAGNRIWDLRRC 161
C+ G+ CE + R+ V + + DP D++ C
Sbjct: 436 CEQGSGRCHCKPNFHGDNCEKCAIGYYNFPFCLRIPI-FPVSTPSSEDPVAG---DIKGC 491
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+ G L C++ GRC C+PGV G +CD C Y F C++C C+ GS
Sbjct: 492 DCNL-----EGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSY 544
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ C SV GQCEC+ V G +C
Sbjct: 545 QMP--CSSVTGQCECRPGVTGQRC 566
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ G++ G+C+CKP +TG +CDRC
Sbjct: 1335 PQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCAS 1394
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1395 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1424
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 654 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKV 713
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 714 CQRPENNYY 722
>gi|46020022|dbj|BAD13428.1| laminin alpha 3b chain [Homo sapiens]
Length = 3333
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 127/271 (46%), Gaps = 42/271 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 356 CNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C + +Y+F C
Sbjct: 416 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAIGYYNF-----PFCLR 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-----RVQSRKNFDPAGNRIWDLRRC 161
P V + D V G + + G V E+ R R + G R D R
Sbjct: 470 IPIFPVSTPSSEDPVAGDIKGCDCNLEG-VLPEICDAHGRCLCRPGVE--GPRC-DTCRS 525
Query: 162 KRDTYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
++P+ GS + C+S G+C+C+PGVTG +CDRC YDF S
Sbjct: 526 GFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSA 585
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PAG++ +S G C+CK +VEG C
Sbjct: 586 CDPAGTI------NSNLGYCQCKLHVEGPTC 610
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 44/238 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 507 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ +S G C+ ++H E
Sbjct: 563 GQRCDRCLSGAYDFPHCQGSSSACDPAGTI------NSNLGYCQC-------KLHVEGPT 609
Query: 143 QSRKNFDPAGNRIWDLR----------RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
SR W+L +C + G G +C +G C CK V
Sbjct: 610 CSRCKL-----LYWNLDKENPSGCSECKCHKAGTVSGTG-----ECRQGDGDCHCKSHVG 659
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 660 GDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSM--CSGPSGVCQCREHVVGKVCQ 715
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 105/240 (43%), Gaps = 44/240 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQ--------------------KSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCEKC YY +GD C+CN G L
Sbjct: 445 CKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGD--IKGCDCNLEGVLPEI 502
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C++ GRC C+PGV G +CD C Y F C++C C+ GS + C SV GQCE
Sbjct: 503 CDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP--CSSVTGQCECR 558
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
+ R D + +D C+ + G++N ++ G CQCK
Sbjct: 559 PGVTGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTIN---SNLGYCQCKL 603
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C RC + +++ + +GC C+C+ AG+V T C G C CK +V G C
Sbjct: 604 HVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSC 663
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 90/225 (40%), Gaps = 55/225 (24%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ EG +C C+P V G +C RC HY
Sbjct: 1250 NSARSLVAFYHKGA----LPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYG 1305
Query: 96 FGEAGCKSCECNPAGSVKNTPNCD----SVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
F CK C C + T C +V+ QCE + S +F P
Sbjct: 1306 FPR--CKPCSCGRRLCEEMTGQCRCPPRTVRPQCEVCETHSF-------------SFHPM 1350
Query: 152 -----------GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
G + C RD+ G+C+CKP +TG +CDRC
Sbjct: 1351 AGCEGCNCSRRGTIEAAMPECDRDS----------------GQCRCKPRITGRQCDRCAS 1394
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F E C C CN G+ CD G C CK+NVEG +C
Sbjct: 1395 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1435
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SN+C G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1687 CNCNGHSNQC---------QDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCP 1737
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1738 HTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 1796
Query: 114 NTPNCDSVKGQC 125
+C + G C
Sbjct: 1797 ---SCHPLTGDC 1805
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 103/264 (39%), Gaps = 63/264 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN--------------PIGSLN 66
+CQ G C++C Y Q+ + C ACNC+ SLN
Sbjct: 320 ECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASNCYYDPDVERQQASLN 379
Query: 67 LQCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPN 117
Q G C+ G C++C +Y +G GC C C+P ++
Sbjct: 380 TQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDP----EHADG 435
Query: 118 CDSVKGQ-----------CESAQLSSRG-----RVHTELRVQSRKNFDPAGNRIWDLRRC 161
C+ G+ CE + R+ V + + DP D++ C
Sbjct: 436 CEQGSGRCHCKPNFHGDNCEKCAIGYYNFPFCLRIPI-FPVSTPSSEDPVAG---DIKGC 491
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+ G L C++ GRC C+PGV G +CD C Y F C++C C+ GS
Sbjct: 492 DCNL-----EGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSY 544
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ C SV GQCEC+ V G +C
Sbjct: 545 QMP--CSSVTGQCECRPGVTGQRC 566
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ G++ G+C+CKP +TG +CDRC
Sbjct: 1335 PQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCAS 1394
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1395 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1424
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 654 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKV 713
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 714 CQRPENNYY 722
>gi|344241919|gb|EGV98022.1| Multiple epidermal growth factor-like domains 9 [Cricetulus
griseus]
Length = 590
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 121/253 (47%), Gaps = 28/253 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ + + +L N+T G C +C G +CE C++ +Y C CNC+
Sbjct: 192 CNCSEIGS---LNVKLCNQTS--GQC-ECHPGYQGLHCETCKEGFYLNHTVGLCLPCNCS 245
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL++ CNS G CQC+ G+TG CD+C +Y F GC SC+CN S +CD
Sbjct: 246 PHGSLSILCNSSGNCQCRVGITGSMCDQCQDGYYGFNMTGCLSCQCNNRSS-----SCDV 300
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLG----HGGSLN 175
+ G C + Q +S+G H E + ++ F + + + RRC G G L
Sbjct: 301 LTGACLNCQENSKGD-HCE---ECKEGFYQSPDATKECRRCPCSAVTSTGNCTIESGELE 356
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQC 234
C QCK G TG C++C+ +Y+ ++ C CEC+ TP C G+C
Sbjct: 357 PTC-----VQCKDGYTGQNCNKCENGYYN-SDSICTRCECHGHVDPTTTPKICKPESGEC 410
Query: 235 -ECKDNVEGAQCR 246
C N G C
Sbjct: 411 INCLHNTTGFWCE 423
>gi|297702386|ref|XP_002828160.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-3 [Pongo
abelii]
Length = 3339
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 123/270 (45%), Gaps = 36/270 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 362 CNCHGHASDCYYDPDVERQQASLTTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 421
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C V +Y F C
Sbjct: 422 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAVGYYSF-----PFCLR 475
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA--GNRIWDLRRCKRD 164
P V D V G + + G + R P G R D R
Sbjct: 476 IPIFPVSTPSPEDPVAGDIKGCDCNLEGVLPEICDAHGRCLCHPGVEGPRC-DTCRSGFY 534
Query: 165 TYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
++P+ GS + C+S G+C+C+PGVTG +CDRC YDF S C+P
Sbjct: 535 SFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSACDP 594
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
AG++ +S G C+CK +VEG C S
Sbjct: 595 AGTI------NSNLGYCQCKLHVEGPTCSS 618
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 44/238 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 513 GRCL-CHPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 568
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ + K E SS +++
Sbjct: 569 GQRCDRCLSGAYDFPHCQGSSSACDPAGTINSNLGYCQCKLHVEGPTCSSCKQLY----- 623
Query: 143 QSRKNFDPAGNRIWDLRR----------CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
W+L + C + G G +C +G C CK V
Sbjct: 624 -------------WNLDKENPNGCSECQCHKAGTVSGTG-----ECRQGDGDCHCKSHVG 665
Query: 192 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GD CD C+ ++ + GC+ C+C+ G+ + C G C+C+++V G C+
Sbjct: 666 GDSCDTCEDGYFALEKRNYFGCQGCQCDIGGASSSV--CSGPSGVCQCREHVVGKACQ 721
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 101/240 (42%), Gaps = 44/240 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQ--------------------KSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCEKC YY +GD C+CN G L
Sbjct: 451 CKPNFHGDNCEKCAVGYYSFPFCLRIPIFPVSTPSPEDPVAGD--IKGCDCNLEGVLPEI 508
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C++ GRC C PGV G +CD C Y F C++C C+ GS + C SV GQCE
Sbjct: 509 CDAHGRCLCHPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP--CSSVTGQCECR 564
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
+ R D + +D C+ + G++N ++ G CQCK
Sbjct: 565 PGVTGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTIN---SNLGYCQCKL 609
Query: 189 GVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C C +++ + GC C+C+ AG+V T C G C CK +V G C
Sbjct: 610 HVEGPTCSSCKQLYWNLDKENPNGCSECQCHKAGTVSGTGECRQGDGDCHCKSHVGGDSC 669
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 89/225 (39%), Gaps = 55/225 (24%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ EG +C C P V G +C RC HY
Sbjct: 1256 NSARSLVAFYHKGA----LPCECHPTGATGPHCSPEGGQCPCWPNVIGRQCTRCATGHYG 1311
Query: 96 FGEAGCKSCECNPAGSVKNTPNCD----SVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
F CK C C + T C +V+ QCE + S +F P
Sbjct: 1312 FPR--CKPCSCGRRLCEEMTGQCHCPPRTVRPQCEVCETHSF-------------SFHPM 1356
Query: 152 -----------GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
G + C RD+ G+C+CKP +TG +CD+C
Sbjct: 1357 AGCEGCNCSRRGTIEAAMPECDRDS----------------GQCRCKPRITGRQCDQCAS 1400
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F E C C CN G+ CD G C CK+NVEG +C
Sbjct: 1401 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1441
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1693 CNCNGHSNRC---------QDGSGICVNCQHNTAGEHCERCQEGYYGNAIHGSCRACPCP 1743
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1744 HTNSFATGCVVSGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 1802
Query: 114 NTPNCDSVKGQC 125
+CD + G C
Sbjct: 1803 ---SCDPLTGDC 1811
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ G++ G+C+CKP +TG +CD+C
Sbjct: 1341 PQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDQCAS 1400
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1401 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1430
>gi|444526053|gb|ELV14262.1| Laminin subunit beta-1 [Tupaia chinensis]
Length = 1821
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 108/231 (46%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G +CE+C+ YYQ NF
Sbjct: 370 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRSCEQCKPFYYQHPERDVRDPNF 429
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 430 CERCTCDPAGSQNDGICDSYTDFSSGLIAGQCRCKLYVEGEHCDVCKEGFYDLSAKDPFG 489
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 490 CKSCACNPLGTIPGGNPCDSETGYCYCK------------RLVTGQHCDQCLVEHWGLSN 537
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C+ + +Y
Sbjct: 538 DLDGCRPCDCDL-----GGALNNSCSAESGQCSCRPHMIGRQCNEVESGYY 583
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G CDRC
Sbjct: 785 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCDRCAPG 844
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK+C+C+ GSV + CD V GQC
Sbjct: 845 TFGFGPSGCKACDCHLQGSV--SAFCDPVTGQC 875
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G +C++CR YY + C C CN +G++ CN + G+C
Sbjct: 1030 GRCLKCLYHTEGDHCQQCRFGYYGDALQQDCRKCVCNYLGTVQEHCNGSDCQCDKATGQC 1089
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCE 126
C P V G CDRC N + GC C CN A S P+C+ GQC+
Sbjct: 1090 LCLPNVVGQNCDRCAPNTWQLASGTGCDPCNCNSAHSFG--PSCNEFTGQCQ 1139
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 105/278 (37%), Gaps = 63/278 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL CQ G NCE+C YY
Sbjct: 902 CQCNGHADDC---------DSVTGECLSCQDFTTGHNCERCLAGYYGDPIIGSGDHCRPC 952
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDV----NHYDFG 97
SG F +C +P+ +L L C C G G +CD C N D G
Sbjct: 953 PCPDGPHSGRQFARSCYQDPV-TLQLA------CVCDTGYIGSRCDDCASGFFGNPLDIG 1005
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-W 156
C+ C+C+ + CD G+C + HTE + F G+ +
Sbjct: 1006 -GSCQPCQCHHNIDTTDPEACDKETGRC------LKCLYHTEGDHCQQCRFGYYGDALQQ 1058
Query: 157 DLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE- 207
D R+C + G++ CN + G+C C P V G CDRC N +
Sbjct: 1059 DCRKCV-----CNYLGTVQEHCNGSDCQCDKATGQCLCLPNVVGQNCDRCAPNTWQLASG 1113
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C CN A S P+C+ GQC+C G C
Sbjct: 1114 TGCDPCNCNSAHSFG--PSCNEFTGQCQCMPGFGGRTC 1149
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 100/275 (36%), Gaps = 85/275 (30%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C FD+E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 306 CFCYGHASECAPVDGFDEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 362
Query: 50 GDNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN S L S G C C+ G C++C +Y E
Sbjct: 363 NSNACKKCNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRSCEQCKPFYYQHPER 422
Query: 100 G------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
C+ C C+PAGS + G C+S S G +
Sbjct: 423 DVRDPNFCERCTCDPAGSQND--------GICDSYTDFSSGLI----------------- 457
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GC 210
G+C+CK V G+ CD C YD GC
Sbjct: 458 ---------------------------AGQCRCKLYVEGEHCDVCKEGFYDLSAKDPFGC 490
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KSC CNP G++ CDS G C CK V G C
Sbjct: 491 KSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQHC 525
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 103/240 (42%), Gaps = 34/240 (14%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C AC+C+ GS++ C+ G+C C GV
Sbjct: 824 GGQC-QCRPNVVGRTCDRCAPGTF-GFGPSGCKACDCHLQGSVSAFCDPVTGQCHCFHGV 881
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CDRC ++ F C+ C+CN + +CDSV G+C S Q + G H R
Sbjct: 882 YGRQCDRCLPGYWGF--PSCQPCQCN-----GHADDCDSVTGECLSCQDFTTG--HNCER 932
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSEGRCQCKPGVT 191
+ DP R C P H G + LQ C C G
Sbjct: 933 CLAGYYGDPIIGSGDHCRPCPCPDGP--HSGRQFARSCYQDPVTLQLA----CVCDTGYI 986
Query: 192 GDKCDRCDV----NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
G +CD C N D G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 987 GSRCDDCASGFFGNPLDIG-GSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQ 1045
>gi|355567482|gb|EHH23823.1| hypothetical protein EGK_07376, partial [Macaca mulatta]
Length = 400
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 24 ECRPGYQGLHCETCKEGFYPNYTSGLCQPCDCSPHGALSILCNSSGKCQCKVGVIGSTCD 83
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 84 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQ-NSKGN-HCE---ECKEG 133
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ + E C QCK G G C++C+ +Y+F
Sbjct: 134 FYQSPDATKECLRCPCSA--VTSTGSCSIKSSELEPECDQCKDGYMGPNCNKCENGYYNF 191
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 192 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 233
>gi|354492391|ref|XP_003508332.1| PREDICTED: multiple epidermal growth factor-like domains protein 9
[Cricetulus griseus]
Length = 598
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 121/253 (47%), Gaps = 28/253 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ + + +L N+T G C +C G +CE C++ +Y C CNC+
Sbjct: 200 CNCSEIGS---LNVKLCNQTS--GQC-ECHPGYQGLHCETCKEGFYLNHTVGLCLPCNCS 253
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL++ CNS G CQC+ G+TG CD+C +Y F GC SC+CN S +CD
Sbjct: 254 PHGSLSILCNSSGNCQCRVGITGSMCDQCQDGYYGFNMTGCLSCQCNNRSS-----SCDV 308
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLG----HGGSLN 175
+ G C + Q +S+G H E + ++ F + + + RRC G G L
Sbjct: 309 LTGACLNCQENSKGD-HCE---ECKEGFYQSPDATKECRRCPCSAVTSTGNCTIESGELE 364
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQC 234
C QCK G TG C++C+ +Y+ ++ C CEC+ TP C G+C
Sbjct: 365 PTC-----VQCKDGYTGQNCNKCENGYYN-SDSICTRCECHGHVDPTTTPKICKPESGEC 418
Query: 235 -ECKDNVEGAQCR 246
C N G C
Sbjct: 419 INCLHNTTGFWCE 431
>gi|167887604|gb|ACA06010.1| laminin alpha-3 chain precursor variant 1 [Homo sapiens]
Length = 3335
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 113/262 (43%), Gaps = 66/262 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 356 CNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C + +Y+F C
Sbjct: 416 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAIGYYNF-----PFCLR 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW---DLRRCKR 163
P V + D V G D GN W +L
Sbjct: 470 IPIFPVSTPSSEDPVAG-------------------------DIKGN--WCDCNLE---- 498
Query: 164 DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
G L C++ GRC C+PGV G +CD C Y F C++C C+ GS +
Sbjct: 499 --------GVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQM 548
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
C SV GQCEC+ V G +C
Sbjct: 549 P--CSSVTGQCECRPGVTGQRC 568
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 44/238 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 509 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 564
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ +S G C+ ++H E
Sbjct: 565 GQRCDRCLSGAYDFPHCQGSSSACDPAGTI------NSNLGYCQC-------KLHVEGPT 611
Query: 143 QSRKNFDPAGNRIWDLR----------RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
SR W+L +C + G G +C +G C CK V
Sbjct: 612 CSRCKL-----LYWNLDKENPSGCSECKCHKAGTVSGTG-----ECRQGDGDCHCKSHVG 661
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 662 GDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSM--CSGPSGVCQCREHVVGKVCQ 717
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 105/240 (43%), Gaps = 42/240 (17%)
Query: 29 CQGDRDGPNCEKCRDNYYQ--------------------KSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCEKC YY +GD C+CN G L
Sbjct: 445 CKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGDIKGNWCDCNLEGVLPEI 504
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C++ GRC C+PGV G +CD C Y F C++C C+ GS + C SV GQCE
Sbjct: 505 CDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP--CSSVTGQCECR 560
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
+ R D + +D C+ + G++N ++ G CQCK
Sbjct: 561 PGVTGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTIN---SNLGYCQCKL 605
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C RC + +++ + +GC C+C+ AG+V T C G C CK +V G C
Sbjct: 606 HVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSC 665
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 90/225 (40%), Gaps = 55/225 (24%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ EG +C C+P V G +C RC HY
Sbjct: 1252 NSARSLVAFYHKGA----LPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYG 1307
Query: 96 FGEAGCKSCECNPAGSVKNTPNCD----SVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
F CK C C + T C +V+ QCE + S +F P
Sbjct: 1308 FPR--CKPCSCGRRLCEEMTGQCRCPPRTVRPQCEVCETHSF-------------SFHPM 1352
Query: 152 -----------GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
G + C RD+ G+C+CKP +TG +CDRC
Sbjct: 1353 AGCEGCNCSRRGTIEAAMPECDRDS----------------GQCRCKPRITGRQCDRCAS 1396
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F E C C CN G+ CD G C CK+NVEG +C
Sbjct: 1397 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1437
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SN+C G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1689 CNCNGHSNQC---------QDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCP 1739
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1740 HTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 1798
Query: 114 NTPNCDSVKGQC 125
+C + G C
Sbjct: 1799 ---SCHPLTGDC 1807
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ G++ G+C+CKP +TG +CDRC
Sbjct: 1337 PQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCAS 1396
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1397 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1426
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 656 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKV 715
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 716 CQRPENNYY 724
>gi|332849571|ref|XP_001156417.2| PREDICTED: laminin subunit alpha-3 isoform 5 [Pan troglodytes]
gi|410332185|gb|JAA35039.1| laminin, alpha 3 [Pan troglodytes]
Length = 3333
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 127/271 (46%), Gaps = 42/271 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 356 CNCHGHASDCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C + +Y+F C
Sbjct: 416 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAIGYYNF-----PFCLR 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-----RVQSRKNFDPAGNRIWDLRRC 161
P V + D V G + + G V E+ R R + G R D R
Sbjct: 470 IPIFPVSTPSSEDPVAGDIKGCDCNLEG-VLPEICDAHGRCLCRPGVE--GPRC-DTCRS 525
Query: 162 KRDTYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
++P+ GS + C+S G+C+C+PGVTG +CDRC YDF S
Sbjct: 526 GFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSA 585
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PAG++ +S G C+CK +VEG C
Sbjct: 586 CDPAGTI------NSNLGYCQCKLHVEGPTC 610
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 44/238 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 507 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ +S G C+ ++H E
Sbjct: 563 GQRCDRCLSGAYDFPHCQGSSSACDPAGTI------NSNLGYCQC-------KLHVEGPT 609
Query: 143 QSRKNFDPAGNRIWDLR----------RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
SR W+L +C + G G +C +G C CK V
Sbjct: 610 CSRCKL-----LYWNLDKENPSGCSECKCHKAGTVSGTG-----ECRQGDGDCHCKSHVG 659
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 660 GDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSM--CSGPSGVCQCREHVVGKVCQ 715
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 105/240 (43%), Gaps = 44/240 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQ--------------------KSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCEKC YY +GD C+CN G L
Sbjct: 445 CKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGD--IKGCDCNLEGVLPEI 502
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C++ GRC C+PGV G +CD C Y F C++C C+ GS + C SV GQCE
Sbjct: 503 CDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP--CSSVTGQCECR 558
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
+ R D + +D C+ + G++N ++ G CQCK
Sbjct: 559 PGVTGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTIN---SNLGYCQCKL 603
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C RC + +++ + +GC C+C+ AG+V T C G C CK +V G C
Sbjct: 604 HVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSC 663
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 90/225 (40%), Gaps = 55/225 (24%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ EG +C C+P V G +C RC HY
Sbjct: 1250 NSARSLVAFYHKGA----LPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYG 1305
Query: 96 FGEAGCKSCECNPAGSVKNTPNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
F CK C C + T C +V+ QCE + S +F P
Sbjct: 1306 FPR--CKPCSCGWRPCEEMTGQCRCPPRTVRPQCEVCETHSF-------------SFHPM 1350
Query: 152 -----------GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
G + C RD+ G+C+CKP +TG +CDRC
Sbjct: 1351 AGCEGCNCSRRGTIEAAMPECDRDS----------------GQCRCKPRITGRQCDRCAS 1394
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F E C C CN G+ CD G C CK+NVEG +C
Sbjct: 1395 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1435
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE C++ YY + C AC C
Sbjct: 1687 CNCNGHSNRC---------QDGSGICVNCQHNTAGEHCEHCQEGYYGNAVHGSCRACPCP 1737
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1738 HTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 1796
Query: 114 NTPNCDSVKGQC 125
+C + G C
Sbjct: 1797 ---SCHPLTGDC 1805
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 103/264 (39%), Gaps = 63/264 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN--------------PIGSLN 66
+CQ G C++C Y Q+ + C ACNC+ SLN
Sbjct: 320 ECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASDCYYDPDVERQQASLN 379
Query: 67 LQCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPN 117
Q G C+ G C++C +Y +G GC C C+P ++
Sbjct: 380 TQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDP----EHADG 435
Query: 118 CDSVKGQ-----------CESAQLSSRG-----RVHTELRVQSRKNFDPAGNRIWDLRRC 161
C+ G+ CE + R+ V + + DP D++ C
Sbjct: 436 CEQGSGRCHCKPNFHGDNCEKCAIGYYNFPFCLRIPI-FPVSTPSSEDPVAG---DIKGC 491
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+ G L C++ GRC C+PGV G +CD C Y F C++C C+ GS
Sbjct: 492 DCNL-----EGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSY 544
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ C SV GQCEC+ V G +C
Sbjct: 545 QMP--CSSVTGQCECRPGVTGQRC 566
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 654 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKV 713
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 714 CQRPENNYY 722
>gi|355701869|gb|EHH29222.1| hypothetical protein EGK_09586, partial [Macaca mulatta]
Length = 3314
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 113/259 (43%), Gaps = 59/259 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 335 CNCHGHASDCYYDSDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 394
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C V +Y+F C
Sbjct: 395 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAVGYYNF--PFCLKIPI 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P +TP+ + DP I C D
Sbjct: 452 FPV----STPSPE-----------------------------DPVAGDIRGKYGC--DCN 476
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
P G L C++ GRC C+PGV G +CD C Y F C++C C+ GS +
Sbjct: 477 P---EGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP-- 529
Query: 227 CDSVKGQCECKDNVEGAQC 245
C SV GQCEC+ V G QC
Sbjct: 530 CSSVTGQCECRPGVTGQQC 548
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 111/242 (45%), Gaps = 52/242 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 489 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 544
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ DS G C ++H E
Sbjct: 545 GQQCDRCLSGAYDFPHCQGSSSACDPAGTI------DSNLGSCPC-------KLHVE--- 588
Query: 143 QSRKNFDPA----GNRIWDLRR----------CKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
P W+L + C + G G +C +G C CK
Sbjct: 589 ------GPTCSICKPLYWNLDKENPNGCSECQCHKAGTVSGTG-----ECRQGDGDCHCK 637
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
V GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G
Sbjct: 638 SHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSV--CSGPSGVCQCREHVVGKA 695
Query: 245 CR 246
C+
Sbjct: 696 CQ 697
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ + C+ EG +C C+P V G +C RC HY
Sbjct: 1232 NSARSLVAFYHKGA----LPCECHPAGATSPHCSPEGGQCPCRPNVIGRQCTRCATGHYG 1287
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG--- 152
F CK C C C+ + GQC + R + E+ +F P
Sbjct: 1288 FPH--CKPCSCG-------LRLCEEMTGQCRCPPRTVRPQC--EVCETHSFSFHPMAGCE 1336
Query: 153 --NRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG 209
N C R G + LQC+ + G+C+CKP +TG +CDRC Y F E
Sbjct: 1337 GCN-------CSRR----GTSEAAMLQCDRDSGQCRCKPRITGRQCDRCASGFYRFPE-- 1383
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C CN G+ CD G C CK+NVEG +C
Sbjct: 1384 CVPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1417
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1669 CNCNGHSNRC---------QDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCP 1719
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1720 HTNRFATGCVVNGGDVRCSCKAGYTGIQCERCAPGYFGNPQKFG-GSCQPCSCNNNGQLG 1778
Query: 114 NTPNCDSVKGQC 125
+CD + G C
Sbjct: 1779 ---SCDPLTGDC 1787
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGS---LNLQCNSE-GRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ G+ LQC+ + G+C+CKP +TG +CDRC
Sbjct: 1317 PQCEVCETHSFSFHPMAGCEGCNCSRRGTSEAAMLQCDRDSGQCRCKPRITGRQCDRCAS 1376
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1377 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1406
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 636 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSVCSGPSGVCQCREHVVGKA 695
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 696 CQRPENNYY 704
>gi|345784566|ref|XP_003432570.1| PREDICTED: laminin subunit alpha-2 [Canis lupus familiaris]
Length = 3112
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C++C+ + C C CN GS + C G+C C+PGVTG KCD
Sbjct: 928 ECKPNVQGRRCDECKPETFGLQSGRGCVPCKCNSFGSKSFDCEESGQCWCQPGVTGKKCD 987
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +C+C+ G+ NCD GQC
Sbjct: 988 RCAHGYFNFQEGGCTACDCSHLGN-----NCDPKTGQC---------------------- 1020
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1021 ICPPNTVGEKCSKCSPNTW--GHSIITGCKACNCSTVGSLDFQCNINTGQCSCHPKFSGA 1078
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C+ H+++ C CEC G+ T + ++ K GQC CK NVEG C
Sbjct: 1079 KCTECNQGHWNYPH--CSPCECFLPGTDDRTCDPETKKCSCVDQTGQCTCKVNVEGVHC 1135
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 112/265 (42%), Gaps = 62/265 (23%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C ++ G G C C GP C++C + Y+ + C C CN
Sbjct: 806 NNFSPTCHLER------GLGLMCDACPAGYTGPRCDRCAEGYFGQPSVPGGSCQPCQCND 859
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHY-DFGEA-GCKSCECNPAGS 111
NL + G C CKPG G +C+ C ++ D EA C+ C C+ S
Sbjct: 860 ----NLDFSIPGSCDSLSGSCRICKPGTAGRRCELCADGYFGDAVEAKNCQPCGCHVNSS 915
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
+ + C + GQCE VQ R+ CK +T+ L G
Sbjct: 916 LSES--CHARTGQCECKP-----------NVQGRR-----------CDECKPETFGLQSG 951
Query: 172 -----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+
Sbjct: 952 RGCVPCKCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN 1011
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
NCD GQC C N G +C
Sbjct: 1012 -----NCDPKTGQCICPPNTVGEKC 1031
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 334 CNCHGKAEECYYDENVARRNLSLNIHGKYIGGGVCINCTQNTAGINCETCIDGFFRPKGV 393
Query: 52 N-----FCTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
+ C C+C+P+GSLN C + G C CKPG G CDRC +
Sbjct: 394 SPSYPRPCQPCHCDPVGSLNEVCVKDEKRARRGLAPGSCHCKPGFRGVSCDRCARGYT-- 451
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK C C+ AGS P
Sbjct: 452 GYPDCKPCNCSGAGSTNEDP 471
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1018 GQCI-CPPNTVGEKCSKCSPNTWGHSIITGCKACNCSTVGSLDFQCNINTGQCSCHPKFS 1076
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G KC C+ H+++ C CEC G+
Sbjct: 1077 GAKCTECNQGHWNYPH--CSPCECFLPGT 1103
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
C C +G CE+C Y +S C C C+P GSL L C+ + G C C+PG T
Sbjct: 1484 CTACPRGYEGQYCERCSAGYTGSPRSPGGTCQECECDPQGSLPLPCDPATGLCTCRPGAT 1543
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1544 GPKCDGCQPGH 1554
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CKPG G CDRC + G CK C C+ AGS N D G C CK+N
Sbjct: 428 APGSCHCKPGFRGVSCDRCARGYT--GYPDCKPCNCSGAGST----NEDPCFGPCNCKEN 481
Query: 240 VEGAQC 245
VEG C
Sbjct: 482 VEGGDC 487
>gi|304434526|ref|NP_001073966.2| multiple epidermal growth factor-like domains protein 9 precursor
[Homo sapiens]
gi|116242627|sp|Q9H1U4.3|MEGF9_HUMAN RecName: Full=Multiple epidermal growth factor-like domains protein
9; Short=Multiple EGF-like domains protein 9; AltName:
Full=Epidermal growth factor-like protein 5;
Short=EGF-like protein 5; Flags: Precursor
gi|119607871|gb|EAW87465.1| hCG28560, isoform CRA_b [Homo sapiens]
gi|221040748|dbj|BAH12051.1| unnamed protein product [Homo sapiens]
Length = 602
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 225 ECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPHGALSIPCNSSGKCQCKVGVIGSICD 284
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 285 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEG 335
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ + E C QCK G G C++C+ +Y+F
Sbjct: 336 FYQSPDATKECLRCPCSA--VTSTGSCSIKSSELEPECDQCKDGYIGPNCNKCENGYYNF 393
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 394 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 435
>gi|114609272|ref|XP_527501.2| PREDICTED: laminin subunit alpha-2 isoform 2 [Pan troglodytes]
Length = 3122
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC + +F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYXNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C+ H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECNRGHWNYPR--CNLCDCFLPGTDAATCDSETEKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC + +F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYXNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCIDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C+ H+++ C C+C G+ + CDS +C
Sbjct: 1087 GAKCTECNRGHWNYPR--CNLCDCFLPGT--DAATCDSETEKC 1125
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSGLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECN 107
C I S N C +EG RC C G G C+RC + G G C+ CEC+
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1531 PYGSLPVP--CDPVTGFC 1546
>gi|395740889|ref|XP_002820204.2| PREDICTED: LOW QUALITY PROTEIN: multiple epidermal growth
factor-like domains protein 9 [Pongo abelii]
Length = 603
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L + CNS G+CQCK GV G CD
Sbjct: 226 ECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPHGALGILCNSSGKCQCKVGVIGSTCD 285
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 286 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEG 336
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ + E C QCK G G C++C+ +Y+F
Sbjct: 337 FYQSPDATKECLRCPCSA--VTSTGSCSIKSSELEPECDQCKDGYIGPNCNKCENGYYNF 394
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 395 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 436
>gi|332824928|ref|XP_003311525.1| PREDICTED: laminin subunit alpha-2 isoform 1 [Pan troglodytes]
Length = 3118
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC + +F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYXNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C+ H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECNRGHWNYPR--CNLCDCFLPGTDAATCDSETEKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC + +F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYXNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCIDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C+ H+++ C C+C G+ + CDS +C
Sbjct: 1087 GAKCTECNRGHWNYPR--CNLCDCFLPGT--DAATCDSETEKC 1125
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSGLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECN 107
C I S N C +EG RC C G G C+RC + G G C+ CEC+
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1531 PYGSLPVP--CDPVTGFC 1546
>gi|397473602|ref|XP_003808296.1| PREDICTED: netrin-4 isoform 1 [Pan paniscus]
Length = 628
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDINVWEASGNRSGGICDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 495
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 496 ------GFSALLH-----SGKCECKEQTLGNAKAFCAMKY 524
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|93204871|ref|NP_067052.2| netrin-4 precursor [Homo sapiens]
gi|76789662|sp|Q9HB63.2|NET4_HUMAN RecName: Full=Netrin-4; AltName: Full=Beta-netrin; AltName:
Full=Hepar-derived netrin-like protein; Flags: Precursor
gi|12407829|gb|AAG53651.1|AF297711_1 netrin 4 precursor [Homo sapiens]
gi|119617950|gb|EAW97544.1| netrin 4, isoform CRA_a [Homo sapiens]
gi|168277682|dbj|BAG10819.1| netrin-4 precursor [synthetic construct]
gi|187951539|gb|AAI36799.1| Netrin 4 [Homo sapiens]
gi|187953351|gb|AAI36800.1| Netrin 4 [Homo sapiens]
Length = 628
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 495
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 496 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 524
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|189055156|dbj|BAG38140.1| unnamed protein product [Homo sapiens]
Length = 628
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 495
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 496 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 524
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|397473604|ref|XP_003808297.1| PREDICTED: netrin-4 isoform 2 [Pan paniscus]
Length = 591
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 295 CKCNGHADTCHFDINVWEASGNRSGGICDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 354
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 355 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 414
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 415 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 458
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 459 ------GFSALLH-----SGKCECKEQTLGNAKAFCAMKY 487
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 379 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 425
>gi|403275843|ref|XP_003929633.1| PREDICTED: netrin-4 [Saimiri boliviensis boliviensis]
Length = 591
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 39/205 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 295 CKCNGHADTCHFDVHVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 354
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C +C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 355 CKSCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 414
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNRIWDLRRCKRDT 165
AGS CD + G C S+ +T++ +F P N+ T
Sbjct: 415 --AGS------CDPITGDCTSS--------NTDIDWYHEVPDFRPTNNK-------SEPT 451
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGV 190
+ G + +S G+C+CK +
Sbjct: 452 WEWGDAQGFSALLHS-GKCECKEQI 475
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 379 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 425
>gi|402896271|ref|XP_003911228.1| PREDICTED: laminin subunit gamma-3, partial [Papio anubis]
Length = 792
Score = 90.9 bits (224), Expect = 4e-16, Method: Composition-based stats.
Identities = 66/199 (33%), Positives = 92/199 (46%), Gaps = 23/199 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQCNSE---GRCQ 76
GHCL C + G +CE CR+ +Y + + C C+C+P GS++ Q + G+C
Sbjct: 46 GHCLRCLHNTAGYHCEHCREGFYGSALVPRPADKCKPCSCHPQGSVSEQMPCDPVTGQCS 105
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C RC +D GC+SC+C+P GS ++ C GQC R
Sbjct: 106 CLPHVTGRDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQCTC-------R 156
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+ R G I R C+ PLG + QC+ G C C+PG G KC
Sbjct: 157 PGVTGQACDRCQLGFFGFSIKGCRACR--CSPLGAASA---QCHENGTCICRPGFEGYKC 211
Query: 196 DRCDVNHYDFGEAG-CKSC 213
DRC N + + C+ C
Sbjct: 212 DRCHDNFFLTADGTHCQEC 230
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 96/233 (41%), Gaps = 49/233 (21%)
Query: 38 CEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC--------QCKPGV 81
CE C D ++ GD C C C S N+ N+ G C +C
Sbjct: 3 CEVCDDGFF---GDPLGLSGPPQPCYQCQC----SGNVDPNAVGNCDPLSGHCLRCLHNT 55
Query: 82 TGDKCDRCDVNHYDFG-----EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
G C+ C Y CK C C+P GSV CD V GQC
Sbjct: 56 AGYHCEHCREGFYGSALVPRPADKCKPCSCHPQGSVSEQMPCDPVTGQCSCLP------- 108
Query: 137 HTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTG 192
H R SR FD R R CK +PLG S QC+ + G+C C+PGVTG
Sbjct: 109 HVTGRDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQCTCRPGVTG 161
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CDRC + + F GC++C C+P G+ + C G C C+ EG +C
Sbjct: 162 QACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCICRPGFEGYKC 211
>gi|158254614|dbj|BAF83280.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 295 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 354
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 355 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 414
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 415 --AGS------CDPITGDCISS--------HTDIGWYHEVPDFRPVHNKSEPAWEWEDAQ 458
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 459 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 487
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 379 SNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 425
>gi|410218490|gb|JAA06464.1| netrin 4 [Pan troglodytes]
gi|410263298|gb|JAA19615.1| netrin 4 [Pan troglodytes]
gi|410342893|gb|JAA40393.1| netrin 4 [Pan troglodytes]
Length = 628
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 495
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 496 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 524
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|162317640|gb|AAI56249.1| Multiple EGF-like-domains 9 [synthetic construct]
gi|162319428|gb|AAI57030.1| Multiple EGF-like-domains 9 [synthetic construct]
Length = 639
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 262 ECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPHGALSIPCNSSGKCQCKVGVIGSICD 321
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 322 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEG 372
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ + E C QCK G G C++C+ +Y+F
Sbjct: 373 FYQSPDATKECLRCPCSA--VTSTGSCSIKSSELEPECDQCKDGYIGPNCNKCENGYYNF 430
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 431 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 472
>gi|410305714|gb|JAA31457.1| netrin 4 [Pan troglodytes]
Length = 628
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 495
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 496 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 524
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|307210677|gb|EFN87100.1| Laminin subunit beta-1 [Harpegnathos saltator]
Length = 1700
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 113/265 (42%), Gaps = 80/265 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + C FD+ +Y+R+G GG C DCQ + G NCE+C+ +Y +
Sbjct: 290 CNCNNHTTSCHFDEAVYDRSGRVSGGVCDDCQHNTRGQNCEQCKPFFYHDVTKDISDSAA 349
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C CNC+ GSL+ L + GRC CK V G +CDRC ++F G
Sbjct: 350 CQPCNCDLGGSLDDGICDSRTDPLSGDESGRCHCKANVEGRRCDRCKNGFWNFNPDSPEG 409
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C CN G+V N C++V G+C
Sbjct: 410 CQACTCNTLGTVDNQ-GCNTVTGECT---------------------------------- 434
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
CKR Y CN QC P G DR GCK C+C+P GS
Sbjct: 435 CKR--YVTAR------DCN-----QCLPNYWGLSEDR----------DGCKPCDCDPGGS 471
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+++ CD + GQC C+ +V G C
Sbjct: 472 YEDS--CDVITGQCRCRPHVSGRTC 494
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 97/203 (47%), Gaps = 25/203 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCK 78
H G CL C + DG NC+ C+ +Y + C C+CN +G+ + G+C C
Sbjct: 919 HNGRCLQCLHNTDGFNCQICKPGFYGNALRQECQDCSCNVLGTDKAAGPCDHRTGQCPCL 978
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CD C+ NH+ GC CEC+ GSV + C+ G CE + GR
Sbjct: 979 PHVIGQLCDSCEENHWRIASGEGCDPCECDAVGSVSD--RCNPYDGTCE-CRPGFGGRRC 1035
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
E + NF GN + C+ D GS + QC+ E G C C G+ G+KCD
Sbjct: 1036 NECQT----NF--WGNPNIECYPCECDVI-----GSASQQCDRETGVCVCHKGIGGEKCD 1084
Query: 197 RCDVNHYDFGEAGCKSCECNPAG 219
+CD ++ GEA +C+P G
Sbjct: 1085 QCDRGYH--GEAP----QCSPCG 1101
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 109/279 (39%), Gaps = 70/279 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG ++ C G C++C+ G NC++C D +Y + D C AC
Sbjct: 793 CECNGHADSC---------DPKTGACINCRDYTTGHNCDRCIDTFYGDPRIGVDIPCRAC 843
Query: 58 NC-NPIGSLNL--------QCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCE 105
C +GS + + C+C G G +C+ C N++ + C CE
Sbjct: 844 PCPGTLGSGHSYADGCSLDSITQDVVCECFEGYAGPRCEHCAENYFGNPEISGGSCIRCE 903
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
CN ++ NCD G+C +Q N D +I CK
Sbjct: 904 CNNNTDLRQPGNCDPHNGRC----------------LQCLHNTDGFNCQI-----CK--- 939
Query: 166 YPLGHGGSLNLQC------------------NSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P +G +L +C + G+C C P V G CD C+ NH+
Sbjct: 940 -PGFYGNALRQECQDCSCNVLGTDKAAGPCDHRTGQCPCLPHVIGQLCDSCEENHWRIAS 998
Query: 208 A-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC CEC+ GSV + C+ G CEC+ G +C
Sbjct: 999 GEGCDPCECDAVGSVSD--RCNPYDGTCECRPGFGGRRC 1035
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
YY G + +C CNP GS +L C N G C CKP V G +CDRC Y F GC
Sbjct: 690 YYVFEGAH---SCECNPTGSRSLLCENYGGMCPCKPNVVGRRCDRCAPGTYGFSPEGCIP 746
Query: 104 CECNPAGSVKNTPNCDSVKGQCE 126
C+C+ G++ N CD G+C+
Sbjct: 747 CDCDGVGALDNF--CDVETGRCK 767
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 93/225 (41%), Gaps = 33/225 (14%)
Query: 35 GPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-QCKPGVTGDKCD 87
GP CE C +NY+ + SG + C C CN L N GRC QC G C
Sbjct: 878 GPRCEHCAENYFGNPEISGGS-CIRCECNNNTDLRQPGNCDPHNGRCLQCLHNTDGFNCQ 936
Query: 88 RCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV-----HTELR 141
C Y + C+ C CN G+ K CD GQC G++ R
Sbjct: 937 ICKPGFYGNALRQECQDCSCNVLGTDKAAGPCDHRTGQCPCLP-HVIGQLCDSCEENHWR 995
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
+ S + DP C+ D GS++ +CN +G C+C+PG G +C+ C
Sbjct: 996 IASGEGCDP----------CECDAV-----GSVSDRCNPYDGTCECRPGFGGRRCNECQT 1040
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N + C CEC+ GS + CD G C C + G +C
Sbjct: 1041 NFWGNPNIECYPCECDVIGSA--SQQCDRETGVCVCHKGIGGEKC 1083
>gi|33112679|gb|AAF69670.2|AF119917_78 hepar-derived netrin-like protein [Homo sapiens]
Length = 591
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 295 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 354
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 355 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 414
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 415 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 458
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 459 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 487
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 379 SNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 425
>gi|440903481|gb|ELR54132.1| Laminin subunit alpha-3, partial [Bos grunniens mutus]
Length = 3301
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 59/261 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G S C++D ++ + GG C++CQ + G NCEKC YY+ G
Sbjct: 312 CNCHGHSTDCYYDPDVERQQASLNIQGLYAGGGVCINCQHNTAGVNCEKCAKGYYRPYGI 371
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + + S GRC C+P GD C+ C +Y F
Sbjct: 372 PVHAHDGCIPCSCHPEHAEDCEQGS-GRCTCRPNFRGDHCEECAAGYYHF---------- 420
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P C + L + + DP D+ + K++ +
Sbjct: 421 ---------PVCSRIP----------------ILPISTPSPEDPVAG---DIIKGKQEHW 452
Query: 167 P--LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
G L C+++GRC C+PGV G +CD C Y F C++C+C+ GS + T
Sbjct: 453 SCDCNLEGVLPEICDAQGRCLCRPGVGGARCDACLPGFYSF--PICQACQCSALGSYQ-T 509
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
P C V GQCEC+ + G +C
Sbjct: 510 P-CSPVTGQCECRPGITGQRC 529
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 42/237 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ G C+ C +Y C AC C+ +GS C+ G+C+C+PG+T
Sbjct: 470 GRCL-CRPGVGGARCDACLPGFYSFP---ICQACQCSALGSYQTPCSPVTGQCECRPGIT 525
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC DF S C+PAG+V DS G C+ ++H E
Sbjct: 526 GQRCDRCLSGASDFPHCQGSSNICDPAGTV------DSSLGHCQC-------KLHVE--- 569
Query: 143 QSRKNFDPA----GNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTG 192
P+ W+L + D + G + +G C CK V G
Sbjct: 570 ------SPSCSICKPLYWNLAKENPDGCSECRCHVAGTMSGIGECGQLDGDCHCKSHVGG 623
Query: 193 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
D CD C+ ++ ++ GC+ C+C+ G+V TP C G C+C+++V G C+
Sbjct: 624 DSCDTCEDGYFALEKSNYFGCQGCQCDIGGAV--TPVCSGRSGVCQCREHVVGKACQ 678
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
+C+CN G L C+++GRC C+PGV G +CD C Y F C++C+C+ GS + T
Sbjct: 453 SCDCNLEGVLPEICDAQGRCLCRPGVGGARCDACLPGFYSF--PICQACQCSALGSYQ-T 509
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
P C V GQCE + R L S D C+ + G+++
Sbjct: 510 P-CSPVTGQCECRPGITGQRCDRCLSGAS------------DFPHCQGSSNICDPAGTVD 556
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKG 232
+S G CQCK V C C +++ + GC C C+ AG++ C + G
Sbjct: 557 ---SSLGHCQCKLHVESPSCSICKPLYWNLAKENPDGCSECRCHVAGTMSGIGECGQLDG 613
Query: 233 QCECKDNVEGAQC 245
C CK +V G C
Sbjct: 614 DCHCKSHVGGDSC 626
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 89/201 (44%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G+ C+ EG +C C+P V G +C RC Y F CK C C
Sbjct: 1232 CECHPAGATGHPCSPEGGQCPCRPHVIGRQCTRCQTGFYGFPH--CKPCSCG-------R 1282
Query: 116 PNCDSVKGQCESAQLSSRGR-----VHTELRVQSRKNFDPAG-----NRIWDLRRCKRDT 165
C+ G+C L+ R + VH+ +F P N C R
Sbjct: 1283 RLCEETTGRCLCPPLTVRPQCDVCEVHS-------FSFHPLAGCEGCN-------CSRT- 1327
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
G G+ +C+ + G+C+C+P +TG +CDRC Y F E C C CN G+
Sbjct: 1328 ---GTDGTATPECDRDHGQCRCRPRITGRQCDRCAPGFYRFPE--CLPCHCNRDGTEPGV 1382
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD G C CK+NV+G +C
Sbjct: 1383 --CDPGTGACLCKENVQGTEC 1401
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ YY + C C C
Sbjct: 1653 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCERCKEGYYWNTIHGSCRVCPCP 1703
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G +C CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1704 HSDSFATGCVVTGENVKCSCKPGYTGTRCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLG 1762
Query: 114 NTPNCDSVKGQC 125
+CD + G C
Sbjct: 1763 ---SCDPLNGDC 1771
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGS---LNLQCNSE-GRCQCKPGVTGDKCDRCDV 91
P C+ C + + C CNC+ G+ +C+ + G+C+C+P +TG +CDRC
Sbjct: 1301 PQCDVCEVHSFSFHPLAGCEGCNCSRTGTDGTATPECDRDHGQCRCRPRITGRQCDRCAP 1360
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1361 GFYRFPE--CLPCHCNRDGTEPGV--CDPGTGAC 1390
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 183 RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC---E 235
+C CKPG TG +C+RC ++ FG C+ C CN G + +CD + G C E
Sbjct: 1720 KCSCKPGYTGTRCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLG---SCDPLNGDCINQE 1775
Query: 236 CKDNVEGAQC 245
KD+ G +C
Sbjct: 1776 PKDSGPGEEC 1785
>gi|301753723|ref|XP_002912719.1| PREDICTED: laminin subunit alpha-3-like [Ailuropoda melanoleuca]
Length = 3294
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 112/259 (43%), Gaps = 62/259 (23%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D + ++ GG C++CQ + G NCE C YY+ G
Sbjct: 312 CNCHGHALDCYYDPDVERQQASLNIHGIYAGGGVCINCQHNTAGINCENCAKGYYRPYGV 371
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+CNP + + S GRC CKP GD C++C V +Y+F C
Sbjct: 372 PVDAPHGCIPCSCNPEHADACEPGS-GRCTCKPNFRGDNCEKCAVGYYNF-----PFCLR 425
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P + D V G D++ C D
Sbjct: 426 IPIFPISTPRPEDPVAG---------------------------------DIKGCDCD-- 450
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G L C++ GRC C+PGV G +CD C + Y F C++C+C+ GS + TP
Sbjct: 451 ---FEGVLPEICDAYGRCLCRPGVEGPRCDACRLGFYSF--PICQACQCSVLGSYQ-TP- 503
Query: 227 CDSVKGQCECKDNVEGAQC 245
C+ V GQCEC + G +C
Sbjct: 504 CNPVTGQCECFPGITGQRC 522
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 108/228 (47%), Gaps = 24/228 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS CN G+C+C PG+T
Sbjct: 463 GRCL-CRPGVEGPRCDACRLGFYSFP---ICQACQCSVLGSYQTPCNPVTGQCECFPGIT 518
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ ++ K ES S ++ L
Sbjct: 519 GQRCDRCLSGAYDFPHCQGSSSACDPAGTLDSSLGYCQCKAHVESPSCSICKPLYWNLAK 578
Query: 143 QSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
+ +P+G C + G + +G C CK V+GD CD C+
Sbjct: 579 E-----NPSG--------CSECQCHVAGTVSGIGECGQRDGDCHCKSHVSGDSCDTCEDG 625
Query: 202 HYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
++ ++ GC+ C+C+ G++ TP C G C C+++V G C+
Sbjct: 626 YFALEKSNYFGCQGCQCDIGGAI--TPLCGGPSGGCRCREHVVGKACQ 671
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 91/202 (45%), Gaps = 45/202 (22%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G++ C++EG +C C+P V G +C RC +Y F CK C C P
Sbjct: 1225 CECHPTGAIGRHCSAEGGQCPCRPSVVGRQCTRCRTGYYGFPH--CKPCSCGPR------ 1276
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL------- 168
C+ V G+C L V + V +F +PL
Sbjct: 1277 -LCEEVTGKC----LCPPHTVRPQCDVCDTYSFS---------------FHPLAGCEGCN 1316
Query: 169 ----GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
G G+ L+C+ E G+C+CKP VTG +CDRC Y F E C C CN G+
Sbjct: 1317 CSRRGTVGAATLECDREHGQCRCKPRVTGRQCDRCAAGFYHFPE--CLPCHCNRDGTEPE 1374
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD G C CK+NVEG +C
Sbjct: 1375 V--CDPGTGACLCKENVEGTEC 1394
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 102/241 (42%), Gaps = 46/241 (19%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPI---------------------GSLNL 67
C+ + G NCEKC YY FC PI G L
Sbjct: 401 CKPNFRGDNCEKCAVGYYNFP---FCLRIPIFPISTPRPEDPVAGDIKGCDCDFEGVLPE 457
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C++ GRC C+PGV G +CD C + Y F C++C+C+ GS + TP C+ V GQCE
Sbjct: 458 ICDAYGRCLCRPGVEGPRCDACRLGFYSF--PICQACQCSVLGSYQ-TP-CNPVTGQCEC 513
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCK 187
+ R D + +D C+ + G+L+ +S G CQCK
Sbjct: 514 FPGITGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTLD---SSLGYCQCK 558
Query: 188 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
V C C +++ + +GC C+C+ AG+V C G C CK +V G
Sbjct: 559 AHVESPSCSICKPLYWNLAKENPSGCSECQCHVAGTVSGIGECGQRDGDCHCKSHVSGDS 618
Query: 245 C 245
C
Sbjct: 619 C 619
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 18/131 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S+RC G C++CQ + G +CE+C++ +Y + C+ C C
Sbjct: 1646 CDCNGHSSRC---------QDGSGICINCQHNTAGDHCERCKEGHYGNAIQGSCSVCLCP 1696
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKN 114
S C G RC CKPG TG +C+RC ++ + C+ C CN G +
Sbjct: 1697 HSNSFATGCVVNGGNMRCFCKPGYTGTQCERCAPGYFGNPQKLGGSCRPCNCNSNGQLG- 1755
Query: 115 TPNCDSVKGQC 125
+C + G C
Sbjct: 1756 --SCHPLTGDC 1764
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN---PIGSLNLQCNSE-GRCQCKP 79
G CL C P C+ C + C CNC+ +G+ L+C+ E G+C+CKP
Sbjct: 1283 GKCL-CPPHTVRPQCDVCDTYSFSFHPLAGCEGCNCSRRGTVGAATLECDREHGQCRCKP 1341
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CDRC Y F E C C CN G+ CD G C
Sbjct: 1342 RVTGRQCDRCAAGFYHFPE--CLPCHCNRDGTEPEV--CDPGTGAC 1383
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 62/154 (40%), Gaps = 34/154 (22%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G CEC+P G++ +C + GQC + S GR T
Sbjct: 1221 GALPCECHPTGAIGR--HCSAEGGQC-PCRPSVVGRQCT--------------------- 1256
Query: 160 RCKRDTYPLGH------GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKS 212
RC+ Y H G L + G+C C P +CD CD + F AGC+
Sbjct: 1257 RCRTGYYGFPHCKPCSCGPRLCEEVT--GKCLCPPHTVRPQCDVCDTYSFSFHPLAGCEG 1314
Query: 213 CECNPAGSV-KNTPNCDSVKGQCECKDNVEGAQC 245
C C+ G+V T CD GQC CK V G QC
Sbjct: 1315 CNCSRRGTVGAATLECDREHGQCRCKPRVTGRQC 1348
>gi|62914008|gb|AAH13591.2| NTN4 protein, partial [Homo sapiens]
Length = 469
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 173 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 232
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 233 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 292
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 293 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 336
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G S L G+C+CK G+ C + +
Sbjct: 337 --------GFSALLH---SGKCECKEQTLGNAKAFCGMKY 365
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 257 SNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 303
>gi|296212618|ref|XP_002752923.1| PREDICTED: netrin-4 isoform 2 [Callithrix jacchus]
Length = 602
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG + C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 329 CKCNGHAETCHFDVHVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 388
Query: 54 CTACNCNPIGSLNLQCNSE-------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 389 CKPCSCHPVGSAILPANSMTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 448
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 449 --AGS------CDPITGDCTSS 462
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 413 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 459
>gi|332231940|ref|XP_003265155.1| PREDICTED: usherin [Nomascus leucogenys]
Length = 1546
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD---- 51
C CN S C ++ + + G GG C DC+ + G NCE C+D ++++ G
Sbjct: 575 CQCNSHSKSCHYNISVDPFPSEHFRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGADPLA 634
Query: 52 -NFCTACNCNPIGSLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C C+C+ +G+ N + C+ GRC CK V+G +C++C Y+ E GC C
Sbjct: 635 IDVCKPCDCDKVGTRNGSILCDQIGGRCNCKRHVSGRQCNQCQNGFYNLRELDPDGCSPC 694
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + + ++F+ G C+
Sbjct: 695 NCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDRCNFGFKFLRSFNNDG-----CEPCQC 749
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS+N CN G+C+CK G +CD C N Y CK+C+C+ AGS+
Sbjct: 750 NLH-----GSVNKFCNPLSGQCECKKEAKGLQCDTCRENFYGLDVTNCKACDCDTAGSLP 804
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T C++ GQC CK NV G QC
Sbjct: 805 GT-VCNAKTGQCICKPNVGGRQC 826
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 114/228 (50%), Gaps = 24/228 (10%)
Query: 29 CQGDRDGPNCEKCRDNY-YQKSGDN-FCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + +S +N C C CN GS+N CN G+C+CK G +
Sbjct: 717 CKANVIGLRCDRCNFGFKFLRSFNNDGCEPCQCNLHGSVNKFCNPLSGQCECKKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y CK+C+C+ AGS+ T C++ GQC + + GR Q
Sbjct: 777 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQC-ICKPNVGGR-------QCN 827
Query: 146 K----NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDV 200
K NF N + C D +G +L C+ S G+C CK GVTG +C++C+
Sbjct: 828 KCLEGNFYLRQNNSFLCLPCNCDKTGTTNG---SLLCDKSTGQCPCKLGVTGLRCNQCEP 884
Query: 201 NHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ Y+ C+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 885 HRYNLTIDNFQRCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 931
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 121/249 (48%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C KC + N+Y + ++F C CNC+ G+ N L C+ S G+C CK
Sbjct: 813 GQCI-CKPNVGGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTTNGSLLCDKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQRCQMCECDSLGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNS 965
Query: 181 -EGRCQCKP-GVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDDSIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQRCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ G+V + C+S+ GQC S G+ + +
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHI--CNSLTGQCVCQDDSIAGQRCDQCK- 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 24 GHCLDCQGDR-DGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCK 78
G C+ CQ D G C++C+D+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCV-CQDDSIAGQRCDQCKDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCK 1024
Query: 79 PGVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1025 QFVTGSKCDACVPSASHLD 1043
>gi|52545838|emb|CAH56243.1| hypothetical protein [Homo sapiens]
Length = 579
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 283 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 342
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 343 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 402
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 403 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 446
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 447 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 475
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 367 SNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 413
>gi|397526450|ref|XP_003833137.1| PREDICTED: multiple epidermal growth factor-like domains protein 9
[Pan paniscus]
Length = 600
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 223 ECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPHGALSILCNSSGKCQCKVGVIGSICD 282
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 283 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEG 333
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + G+ +++ + E C QCK G G C++C+ +Y+F
Sbjct: 334 FYQSPDATKECLRCPCSA--VTSTGTCSIKSSELEPECDQCKDGYIGPNCNKCENGYYNF 391
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 392 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTSGFWCE 433
>gi|348041324|ref|NP_001231686.1| usherin isoform 1 [Rattus norvegicus]
Length = 5164
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 129/266 (48%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-- 52
C C+G ++ C +D + YNR G GG C DCQ G NCE C+D +Y+ G +
Sbjct: 610 CQCHGHASSCHYDASMDPFPLEYNRGG-GGVCDDCQHHTTGRNCESCQDYFYRPIGADPA 668
Query: 53 ---FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
C C+CN G+ N L C+ G +C CK V+G +C RC + Y GC+
Sbjct: 669 DPEVCKHCDCNRDGTRNGSLLCDLVGGQCDCKRRVSGRRCFRCHIGFYGLQALDPDGCRP 728
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+CNP+G+V C GQC S + V LR R +F G + LR
Sbjct: 729 CDCNPSGTVDGDITCHHNSGQC-----SCKANV-IGLRCD-RCSF---GFKF--LRSLNA 776
Query: 164 DTYPLGH---GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
D H GS+N C+ G+C CK G +CD C N Y + C+ C+CN AG
Sbjct: 777 DGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLPWSACEVCDCNRAG 836
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ T CD+ GQC CK +V G +C
Sbjct: 837 TQAGT-VCDAETGQCVCKPSVGGRRC 861
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 120/249 (48%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ G C +C++ Y+ +++ + C CNC G++N L C+ S G+C CK
Sbjct: 848 GQCV-CKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCK 906
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C +C+ + ++ GC++CEC+ G++ + CD V GQC
Sbjct: 907 LGVTGLRCHQCEPHRFNLTVDNLQGCQACECDSLGTLPGS-TCDPVSGQC---------- 955
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L + R+ RRC+R + G G+++ CNS
Sbjct: 956 ----LCLPHRQG-----------RRCERCQPGFYSSPGNATGCLPCSCHTAGAVSHICNS 1000
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ P TG C +C +++ F C+ C C+ G++ T CD V GQC C
Sbjct: 1001 VTGQCSCRDPSTTGQSCHQCQDHYFGFDPRTGRCQPCHCHLEGALNET--CDVVTGQCFC 1058
Query: 237 KDNVEGAQC 245
K+ V G++C
Sbjct: 1059 KEFVTGSKC 1067
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 110/237 (46%), Gaps = 30/237 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQC 77
GG C DC+ G C +C +Y Q + C C+CNP G+++ + C+ + G+C C
Sbjct: 694 GGQC-DCKRRVSGRRCFRCHIGFYGLQALDPDGCRPCDCNPSGTVDGDITCHHNSGQCSC 752
Query: 78 KPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
K V G +CDRC + F + GC+ C CN GSV CD + GQC + ++
Sbjct: 753 KANVIGLRCDRCSFG-FKFLRSLNADGCEPCHCNLHGSVNQL--CDPLSGQCVCKK-EAK 808
Query: 134 GRVHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVT 191
G LR R+NF ++ C R G C++E G+C CKP V
Sbjct: 809 G-----LRCDVCRENFYGLPWSACEVCDCNRA------GTQAGTVCDAETGQCVCKPSVG 857
Query: 192 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +C C +++ + C C C G+V + CD GQC CK V G +C
Sbjct: 858 GRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCKLGVTGLRC 914
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 108/239 (45%), Gaps = 46/239 (19%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + + C C+CN GS+N C+ G+C CK G +
Sbjct: 752 CKANVIGLRCDRCSFGFKFLRSLNADGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLR 811
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y + C+ C+CN AG+ T CD+ GQC + S GR +E
Sbjct: 812 CDVCRENFYGLPWSACEVCDCNRAGTQAGT-VCDAETGQC-VCKPSVGGRRCSE------ 863
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGS-LNLQCN---------------SEGRCQCKPG 189
CK + L S L L CN S G+C CK G
Sbjct: 864 ---------------CKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCKLG 908
Query: 190 VTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG +C +C+ + ++ GC++CEC+ G++ + CD V GQC C + +G +C
Sbjct: 909 VTGLRCHQCEPHRFNLTVDNLQGCQACECDSLGTLPGS-TCDPVSGQCLCLPHRQGRRC 966
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 78/184 (42%), Gaps = 32/184 (17%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQC--NSEGRCQCKPGVTGD 84
C+ G C +C + + + DN C AC C+ +G+L G+C C P G
Sbjct: 905 CKLGVTGLRCHQCEPHRFNLTVDNLQGCQACECDSLGTLPGSTCDPVSGQCLCLPHRQGR 964
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C+RC Y GC C C+ AG+V + C+SV GQC S+ G
Sbjct: 965 RCERCQPGFYSSPGNATGCLPCSCHTAGAVSHI--CNSVTGQCSCRDPSTTG-------- 1014
Query: 143 QS-------RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDK 194
QS FDP R C + G+LN C+ G+C CK VTG K
Sbjct: 1015 QSCHQCQDHYFGFDPRTGRCQPCH-CHLE-------GALNETCDVVTGQCFCKEFVTGSK 1066
Query: 195 CDRC 198
CD C
Sbjct: 1067 CDIC 1070
>gi|27370004|ref|NP_766282.1| multiple epidermal growth factor-like domains protein 9 precursor
[Mus musculus]
gi|46395840|sp|Q8BH27.1|MEGF9_MOUSE RecName: Full=Multiple epidermal growth factor-like domains protein
9; Short=Multiple EGF-like domains protein 9; AltName:
Full=Epidermal growth factor-like protein 5;
Short=EGF-like protein 5; Flags: Precursor
gi|26331078|dbj|BAC29269.1| unnamed protein product [Mus musculus]
gi|26333199|dbj|BAC30317.1| unnamed protein product [Mus musculus]
gi|28972413|dbj|BAC65660.1| mKIAA0818 protein [Mus musculus]
gi|111598761|gb|AAH88994.1| Multiple EGF-like-domains 9 [Mus musculus]
gi|148699121|gb|EDL31068.1| multiple EGF-like-domains 9 [Mus musculus]
gi|187951867|gb|AAI38129.1| Multiple EGF-like-domains 9 [Mus musculus]
gi|223459872|gb|AAI38130.1| Multiple EGF-like-domains 9 [Mus musculus]
Length = 600
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 108/226 (47%), Gaps = 22/226 (9%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC G +C+ C++ +Y C C+C+P G++++ CNS G CQCK GVTG CD
Sbjct: 223 DCHVGYQGLHCDTCKEGFYLNHTVGLCLPCHCSPHGAVSILCNSSGNCQCKVGVTGSMCD 282
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C HY FG+ GC C+CN + +CD G C + Q +S+G H E + ++
Sbjct: 283 KCQDGHYGFGKTGCLPCQCN-----NRSDSCDVHTGACLNCQENSKGE-HCE---ECKEG 333
Query: 148 FDPAGNRIWDLRRCK-RDTYPLG----HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
F P+ + RC G G L C+ QCK G TG C++C+ +
Sbjct: 334 FYPSPDAAKQCHRCPCSAVTSTGNCTIESGELEPTCD-----QCKDGYTGQNCNKCENGY 388
Query: 203 YDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
Y+ ++ C CEC+ TP C G+C C N G C
Sbjct: 389 YN-SDSICTQCECHGHVDPIKTPKICKPESGECINCLHNTTGFWCE 433
>gi|10437037|dbj|BAB14964.1| unnamed protein product [Homo sapiens]
Length = 341
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 105/220 (47%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 45 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 104
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 105 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 164
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+
Sbjct: 165 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWED-- 206
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G S L G+C+CK G+ C + +
Sbjct: 207 ------AQGFSALLH---SGKCECKEQTLGNAKAFCGMKY 237
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 129 SNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 175
>gi|426373737|ref|XP_004053746.1| PREDICTED: netrin-4 isoform 1 [Gorilla gorilla gorilla]
Length = 628
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNMWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS + NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVIPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 495
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 496 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 524
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|332840087|ref|XP_003313918.1| PREDICTED: netrin-4 isoform 1 [Pan troglodytes]
Length = 591
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 295 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 354
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 355 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 414
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 415 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 458
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G S L G+C+CK G+ C + +
Sbjct: 459 --------GFSALLH---SGKCECKEQTLGNAKAFCGMKY 487
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 379 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 425
>gi|241812099|ref|XP_002414597.1| laminin beta 1 chain, putative [Ixodes scapularis]
gi|215508808|gb|EEC18262.1| laminin beta 1 chain, putative [Ixodes scapularis]
Length = 2084
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 116/265 (43%), Gaps = 81/265 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
CNCNG ++RC FD ++ R+G GG C DC+ + G NCE+C YY+ S
Sbjct: 752 CNCNGHASRCHFDAAVWERSGRVSGGVCDDCRDNTMGLNCEQCVPFYYKDPQRDPSDPYA 811
Query: 54 CTACNCNPIGSLN---------LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P GSL+ +Q S GRC CK V +CDRC H++F A G
Sbjct: 812 CQPCDCDPRGSLDEGVCDPQDDIQAGSVAGRCHCKKNVESRRCDRCKRGHFNFQAANPDG 871
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C C+ G+ + C+ G+C
Sbjct: 872 CEPCSCHELGTAGD--GCNVYTGECT---------------------------------- 895
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
CKR+ + CN QC P G D E GCK C+C+P G+
Sbjct: 896 CKRNV--------IGRDCN-----QCLPEYWGLGND----------EDGCKPCDCDPGGA 932
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+N+ CD V GQC C+ +V+G +C
Sbjct: 933 YENS--CDVVTGQCRCRPSVQGRRC 955
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 109/287 (37%), Gaps = 86/287 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C C+G ++ C +RTGH HC D GP+C++C +Y
Sbjct: 1278 CECHGHADTCD------SRTGHCSHCRDFTS---GPHCDRCETGFYGDPRYGVDIPCRPC 1328
Query: 47 -----QKSGDNFCTACNCNP-IGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG 100
SG N T+C+ +P G++ C C PG G++CDRC N+Y A
Sbjct: 1329 PCPGTIDSGVNHATSCDLDPRTGNVA--------CHCSPGYVGERCDRCANNYYGEPNAP 1380
Query: 101 ---CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
C+ CEC+ NCDS G C ++ G H E
Sbjct: 1381 GGECRRCECSGNTDDTQPGNCDSRTGVCLRCLYNTEGH-HCE------------------ 1421
Query: 158 LRRCKRDTYPLGHGGSLNLQC------------------NSEGRCQCKPGVTGDKCDRCD 199
RCK P +G + QC G+C C P V G CDRC
Sbjct: 1422 --RCK----PGHYGDASRQQCLECVCNMLGMDHTRGYCDAVTGQCPCLPNVEGRSCDRCA 1475
Query: 200 VNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N + GC+ C C+P GS C+ GQC CK G QC
Sbjct: 1476 PNFWKIASGEGCEDCGCDPQGSYD--LKCNEFDGQCPCKPGHGGRQC 1520
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 103/239 (43%), Gaps = 34/239 (14%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
GG C C+ + G NC++C Y G C C+CN IGSL+ C+++ G+C+C+P
Sbjct: 1200 GGQC-QCKANVVGRNCDRCAPGTY-GFGPGGCRPCDCNGIGSLDNFCDAQTGQCKCRPNT 1257
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG----RVH 137
G +CD C ++++ C+ CEC+ + CDS G C + + G R
Sbjct: 1258 YGRQCDECQPGYWNY--PNCQRCECH-----GHADTCDSRTGHCSHCRDFTSGPHCDRCE 1310
Query: 138 TELRVQSRKNFD------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGV 190
T R D P I + H S +L + C C PG
Sbjct: 1311 TGFYGDPRYGVDIPCRPCPCPGTI---------DSGVNHATSCDLDPRTGNVACHCSPGY 1361
Query: 191 TGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
G++CDRC N+Y A C+ CEC+ NCDS G C C N EG C
Sbjct: 1362 VGERCDRCANNYYGEPNAPGGECRRCECSGNTDDTQPGNCDSRTGVCLRCLYNTEGHHC 1420
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C + +G +C++C N+++ + C C C+P GS +L+CN +G+C CKPG G +C+
Sbjct: 1462 CLPNVEGRSCDRCAPNFWKIASGEGCEDCGCDPQGSYDLKCNEFDGQCPCKPGHGGRQCN 1521
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+C H+ C CECN G+ T C G C
Sbjct: 1522 QCQDLHWGNPRVRCYQCECNVPGAA--TSQCHRNNGSC 1557
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ GS + CN+ G +CQCK V G CDRC Y FG GC+ C+CN GS+ N
Sbjct: 1184 CRCDAQGSHSSVCNTLGGQCQCKANVVGRNCDRCAPGTYGFGPGGCRPCDCNGIGSLDNF 1243
Query: 116 PNCDSVKGQCE 126
CD+ GQC+
Sbjct: 1244 --CDAQTGQCK 1252
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 90/235 (38%), Gaps = 51/235 (21%)
Query: 35 GPNCEKCRDNYYQK--SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV--------TGD 84
G C++C +NYY + + C C C S N G C + GV G
Sbjct: 1363 GERCDRCANNYYGEPNAPGGECRRCEC----SGNTDDTQPGNCDSRTGVCLRCLYNTEGH 1418
Query: 85 KCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C+RC HY D C C CN G CD+V GQC V+
Sbjct: 1419 HCERCKPGHYGDASRQQCLECVCNMLGMDHTRGYCDAVTGQCPCLP-----------NVE 1467
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS-EGRCQCKPGVT 191
R RC + + + G GS +L+CN +G+C CKPG
Sbjct: 1468 GRS-----------CDRCAPNFWKIASGEGCEDCGCDPQGSYDLKCNEFDGQCPCKPGHG 1516
Query: 192 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G +C++C H+ C CECN G+ T C G C C V G +C+
Sbjct: 1517 GRQCNQCQDLHWGNPRVRCYQCECNVPGAA--TSQCHRNNGSCVCIPGVAGDRCQ 1569
>gi|197097358|ref|NP_001125560.1| netrin-4 precursor [Pongo abelii]
gi|75041990|sp|Q5RB89.1|NET4_PONAB RecName: Full=Netrin-4; Flags: Precursor
gi|55728456|emb|CAH90971.1| hypothetical protein [Pongo abelii]
Length = 628
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR-KNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWHHEFPDFRPVHNKSEAAWEWEDAQ 495
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 496 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 524
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|296212616|ref|XP_002752922.1| PREDICTED: netrin-4 isoform 1 [Callithrix jacchus]
Length = 625
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG + C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 329 CKCNGHAETCHFDVHVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 388
Query: 54 CTACNCNPIGSLNLQCNSE-------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 389 CKPCSCHPVGSAILPANSMTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 448
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 449 --AGS------CDPITGDCTSS 462
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 413 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 459
>gi|148672868|gb|EDL04815.1| laminin, alpha 2, isoform CRA_a [Mus musculus]
Length = 2492
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 121/254 (47%), Gaps = 37/254 (14%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C + RTG +C+ + G +C++C+ + C CNC
Sbjct: 934 CNINGSFSEIC------HTRTGQ----CECRPNVQGRHCDECKPETFGLQLGRGCLPCNC 983
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+ G+ NCD
Sbjct: 984 NSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHLGN-----NCD 1038
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GQC ++ G +E + + G ++ C T GSL QCN
Sbjct: 1039 PKTGQCICPP-NTTGEKCSECLPNTWGHSIVTGCKV-----CNCSTV-----GSLASQCN 1087
Query: 180 -SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK------- 231
+ G+C C P +G KC C H+++ C C+C G+ T + ++ K
Sbjct: 1088 VNTGQCSCHPKFSGMKCSECSRGHWNY--PLCTLCDCFLPGTDATTCDLETRKCSCSDQT 1145
Query: 232 GQCECKDNVEGAQC 245
GQC CK NVEG C
Sbjct: 1146 GQCSCKVNVEGVHC 1159
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 114/267 (42%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 830 NNFSPTCHLDRSL------GLICDECPIGYTGPRCERCAEGYFGQPSIPGGSCQPCQCND 883
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 884 ----NLDYSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVNAKNCQPCRCNIN 937
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C + GQCE + + +GR E CK +T+ L
Sbjct: 938 GSFSEI--CHTRTGQCE-CRPNVQGRHCDE---------------------CKPETFGLQ 973
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+
Sbjct: 974 LGRGCLPCNCNSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHL 1033
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD GQC C N G +C
Sbjct: 1034 GN-----NCDPKTGQCICPPNTTGEKC 1055
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 69/196 (35%), Gaps = 59/196 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C +C N + S C CNC+ +GSL QCN + G+C C P +
Sbjct: 1042 GQCI-CPPNTTGEKCSECLPNTWGHSIVTGCKVCNCSTVGSLASQCNVNTGQCSCHPKFS 1100
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C H+++ C C+C G+ T + ++ K C
Sbjct: 1101 GMKCSECSRGHWNY--PLCTLCDCFLPGTDATTCDLETRKCSCS---------------- 1142
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
+ G+C CK V G CDRC
Sbjct: 1143 ------------------------------------DQTGQCSCKVNVEGVHCDRCRPGK 1166
Query: 203 YDF---GEAGCKSCEC 215
+ GC SC C
Sbjct: 1167 FGLDAKNPLGCSSCYC 1182
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1508 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDRVTGLCTCRPGAT 1567
Query: 83 GDKCDRCDVNH 93
G KCD C+ H
Sbjct: 1568 GRKCDGCEHWH 1578
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G CDRC ++ G C+ C C+ GS N D G C CK+NVE
Sbjct: 454 GSCHCKTGFGGVNCDRCVRGYH--GYPDCQPCNCSGLGST----NEDPCVGPCSCKENVE 507
Query: 242 GAQC 245
G C
Sbjct: 508 GEDC 511
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 6 FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL 65
S C D++ R G C C+ G NC++C Y+ G C CNC+ +GS
Sbjct: 436 LSEVCVKDEKYAQRGLKPGSC-HCKTGFGGVNCDRCVRGYH---GYPDCQPCNCSGLGST 491
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
N + G C CK V G+ C RC ++ E K CE
Sbjct: 492 N-EDPCVGPCSCKENVEGEDCSRCKSGFFNLQEDNQKGCE 530
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S++C D E C +CQ G CE+C YY + N C C
Sbjct: 1434 CQCNGHSSQC--DPET-------SVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCA 1484
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C +P + + C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1485 CPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1544
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1545 PYGSLPVP--CDRVTGLC 1560
>gi|55729448|emb|CAH91455.1| hypothetical protein [Pongo abelii]
Length = 482
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 186 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 245
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 246 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 305
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR-KNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 306 --AGS------CDPITGDCISS--------HTDIDWHHEVPDFRPVHNKSEAAWEWEDAQ 349
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G S L G+C+CK G+ C + +
Sbjct: 350 --------GFSALLH---SGKCECKEQTLGNAKAFCGMKY 378
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 270 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 316
>gi|426373739|ref|XP_004053747.1| PREDICTED: netrin-4 isoform 2 [Gorilla gorilla gorilla]
Length = 591
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 295 CKCNGHADTCHFDVNMWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 354
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS + NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 355 CKPCSCHPVGSAVIPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 414
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 415 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 458
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 459 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 487
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 379 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 425
>gi|119617951|gb|EAW97545.1| netrin 4, isoform CRA_b [Homo sapiens]
Length = 605
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 31/169 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR 154
AGS CD + G C S+ HT++ +F P N+
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNK 484
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|410209298|gb|JAA01868.1| multiple EGF-like-domains 9 [Pan troglodytes]
Length = 600
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 223 ECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPHGALSILCNSSGKCQCKVGVIGSICD 282
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 283 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEG 333
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + G+ +++ + E C QCK G G C++C+ +Y+F
Sbjct: 334 FYQSPDATKECLRCPCSA--VTSTGTCSIKSSELEPECDQCKDGYIGPNCNKCENGYYNF 391
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 392 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 433
>gi|397473606|ref|XP_003808298.1| PREDICTED: netrin-4 isoform 3 [Pan paniscus]
Length = 605
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 31/169 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDINVWEASGNRSGGICDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR 154
AGS CD + G C S+ HT++ +F P N+
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNK 484
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|332832732|ref|XP_520222.3| PREDICTED: multiple EGF-like-domains 9 [Pan troglodytes]
Length = 598
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 221 ECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPHGALSILCNSSGKCQCKVGVIGSICD 280
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 281 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEG 331
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + G+ +++ + E C QCK G G C++C+ +Y+F
Sbjct: 332 FYQSPDATKECLRCPCSA--VTSTGTCSIKSSELEPECDQCKDGYIGPNCNKCENGYYNF 389
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 390 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 431
>gi|126340557|ref|XP_001363841.1| PREDICTED: laminin subunit beta-1 [Monodelphis domestica]
Length = 1786
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 104/224 (46%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ N
Sbjct: 335 CNCNEHSGSCHFDMAVYLATGNISGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNI 394
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C AC C+P GS N G+C+CK G+KCD C Y G
Sbjct: 395 CAACTCDPAGSKNGGICDGYTDFSTGLIAGQCRCKLYTEGEKCDICKEGFYGLSADDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+SC CNP G++ CDS G C +L + H + +Q N + R
Sbjct: 455 CQSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQ--HCDQCLQEHWGL---SNDLDGCRP 509
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GGSLN C++E G+C C+P + G +C+ + +Y
Sbjct: 510 CDCDV-----GGSLNNNCSAESGQCLCRPHMIGRQCNEVEAGYY 548
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S AC C+P GSL+ C+ G +CQC+P V G CDRC
Sbjct: 750 PMTDVCRNIIFSISALLHQSGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCDRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK C+C+ GSV CD V GQC
Sbjct: 810 TFGFGPSGCKPCDCHVQGSVNAF--CDPVTGQC 840
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 76/192 (39%), Gaps = 38/192 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--------GRC 75
G CL C +G NC+ C+ YY + C C CN +G++ C+ G+C
Sbjct: 995 GRCLKCLYHTEGENCQLCKYGYYGDALQQDCRKCVCNYLGTVQEHCDGSDCQCDKITGQC 1054
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSR 133
C P V G CD C N ++ GC+ C C+ A S P+C+ GQC+ R
Sbjct: 1055 LCLPNVIGQNCDHCAPNTWNLASGTGCEPCSCDAAHSFG--PSCNEFTGQCQCMPGFGGR 1112
Query: 134 GRVHTELRVQSRKNF-------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
+ N DP G I +C R T G+C C
Sbjct: 1113 TCDECQELFWGDPNVKCQACDCDPRGIEI---HQCDRVT----------------GQCVC 1153
Query: 187 KPGVTGDKCDRC 198
GV G +CD+C
Sbjct: 1154 IEGVEGPRCDKC 1165
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 115/262 (43%), Gaps = 57/262 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNP------------IGS 64
GHC+ C+ + G NCE C D Y+ + N C CNCN + +
Sbjct: 296 GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSGSCHFDMAVYLAT 354
Query: 65 LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPN 117
N+ S G C C+ G C++C +Y E C +C C+PAGS KN
Sbjct: 355 GNI---SGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNICAACTCDPAGS-KNGGI 410
Query: 118 CDS--------VKGQCESAQLSSRGRVHTELR---VQSRKNFDPAGNRIWDLRRCKRDTY 166
CD + GQC R +++TE + + + + + + C +
Sbjct: 411 CDGYTDFSTGLIAGQC-------RCKLYTEGEKCDICKEGFYGLSADDPFGCQSCACN-- 461
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKN 223
PLG N C+SE G C CK VTG CD+C H+ GC+ C+C+ GS+ N
Sbjct: 462 PLGTIPGGN-PCDSETGYCYCKRLVTGQHCDQCLQEHWGLSNDLDGCRPCDCDVGGSLNN 520
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
NC + GQC C+ ++ G QC
Sbjct: 521 --NCSAESGQCLCRPHMIGRQC 540
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 104/277 (37%), Gaps = 61/277 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G C CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DPISGECFGCQDYTSGHNCERCLPGYYGDPVIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--- 98
+SG F C +P+ +L L C C PG G +C+ C ++ E
Sbjct: 918 PCPDGPESGRQFANTCYQDPV-TLQL------VCVCNPGYLGARCNECASGYFGNPEDVD 970
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WD 157
C+ C+C+ + CD G+C + HTE + G+ + D
Sbjct: 971 GVCQQCQCHNNIDTTDPEACDKRTGRC------LKCLYHTEGENCQLCKYGYYGDALQQD 1024
Query: 158 LRRCKRDTYPLGHGGSLNLQCNSE--------GRCQCKPGVTGDKCDRCDVNHYDFGE-A 208
R+C + G++ C+ G+C C P V G CD C N ++
Sbjct: 1025 CRKCV-----CNYLGTVQEHCDGSDCQCDKITGQCLCLPNVIGQNCDHCAPNTWNLASGT 1079
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+ A S P+C+ GQC+C G C
Sbjct: 1080 GCEPCSCDAAHSFG--PSCNEFTGQCQCMPGFGGRTC 1114
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 93/227 (40%), Gaps = 32/227 (14%)
Query: 35 GPNCEKCRDNYY--QKSGDNFCTACNC-NPIGSLNLQC--NSEGRC-QCKPGVTGDKCDR 88
G C +C Y+ + D C C C N I + + + GRC +C G+ C
Sbjct: 952 GARCNECASGYFGNPEDVDGVCQQCQCHNNIDTTDPEACDKRTGRCLKCLYHTEGENCQL 1011
Query: 89 CDVNHY-DFGEAGCKSCECNPAGSVKNTPN-----CDSVKGQCESAQLSSRGRVHTELRV 142
C +Y D + C+ C CN G+V+ + CD + GQC L
Sbjct: 1012 CKYGYYGDALQQDCRKCVCNYLGTVQEHCDGSDCQCDKITGQCLC------------LPN 1059
Query: 143 QSRKNFDPAGNRIWDLRR---CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
+N D W+L C+ + H S CN G+CQC PG G CD C
Sbjct: 1060 VIGQNCDHCAPNTWNLASGTGCEPCSCDAAH--SFGPSCNEFTGQCQCMPGFGGRTCDEC 1117
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C++C+C+P G CD V GQC C + VEG +C
Sbjct: 1118 QELFWGDPNVKCQACDCDPRGI--EIHQCDRVTGQCVCIEGVEGPRC 1162
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 98/237 (41%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C C+C+ GS+N C+ G+C C G+
Sbjct: 789 GGQC-QCRPNVVGRTCDRCAPGTF-GFGPSGCKPCDCHVQGSVNAFCDPVTGQCHCFQGI 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CD+C ++ F C+ C+CN + +CD + G+C Q + G H R
Sbjct: 847 YTRQCDQCLRGYWGF--PSCQPCQCN-----GHADDCDPISGECFGCQDYTSG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
DP R C R + + LQ C C PG G
Sbjct: 898 CLPGYYGDPVIGSGDHCRPCPCPDGPESGRQFANTCYQDPVTLQL----VCVCNPGYLGA 953
Query: 194 KCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+C+ C ++ E C+ C+C+ + CD G+C +C + EG C+
Sbjct: 954 RCNECASGYFGNPEDVDGVCQQCQCHNNIDTTDPEACDKRTGRCLKCLYHTEGENCQ 1010
>gi|332229870|ref|XP_003264110.1| PREDICTED: LOW QUALITY PROTEIN: multiple epidermal growth
factor-like domains protein 9 [Nomascus leucogenys]
Length = 610
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 233 ECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPHGALSILCNSSGKCQCKVGVIGSTCD 292
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 293 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEG 343
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ + E C +CK G G C++C+ +Y+F
Sbjct: 344 FYQSPDATKECLRCPCSA--VTSTGSCSIKSSELEPECDECKDGYIGPNCNKCENGYYNF 401
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 402 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 443
>gi|431839379|gb|ELK01305.1| Laminin subunit beta-1 [Pteropus alecto]
Length = 1785
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 108/231 (46%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN ++ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 335 CNCNEHASSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C Y G
Sbjct: 395 CEQCTCDPAGSQNGGICDSYTDFSAGLIAGQCRCKLYVEGEHCDICKEGFYGLSAEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS +G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSDRGYCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCSAESGQCSCRPHMIGRQCNEVEPGYY 548
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C G +CQC+P V G CDRC
Sbjct: 749 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCEPNGGQCQCRPNVVGRTCDRCAPG 808
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV + CDS+ GQC
Sbjct: 809 TFGFGPSGCKPCECHLQGSV--SAFCDSITGQC 839
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 61/277 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL CQ G NCE+C YY
Sbjct: 866 CQCNGHADDC---------DSVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPC 916
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F ++C +P+ +L L C C PG G +CD C + + E G
Sbjct: 917 PCPDGPDSGRQFASSCYQDPV-TLQLA------CVCNPGYIGSRCDDCAAGFFGNPSEVG 969
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WD 157
C+ C C+ + CD G+C + G H +L F G+ + D
Sbjct: 970 GMCQPCHCHHNIDTTDPEACDKETGRCLKCLYHTEGE-HCQL-----CRFGYYGDALQQD 1023
Query: 158 LRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE-A 208
R+C + G++ CN + G+C C P V G CD C N +
Sbjct: 1024 CRKCV-----CNYLGTMQEHCNGSDCQCEKTTGQCLCLPNVVGQNCDHCAPNTWQLASGT 1078
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C+C+ A S P+C+ GQC+C G C
Sbjct: 1079 GCDPCDCDAAHSFG--PSCNEFTGQCQCMPGFGGRTC 1113
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G +C+ CR YY + C C CN +G++ CN + G+C
Sbjct: 994 GRCLKCLYHTEGEHCQLCRFGYYGDALQQDCRKCVCNYLGTMQEHCNGSDCQCEKTTGQC 1053
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CD C N + GC C+C+ A S P+C+ GQC+ G
Sbjct: 1054 LCLPNVVGQNCDHCAPNTWQLASGTGCDPCDCDAAHSFG--PSCNEFTGQCQCMP-GFGG 1110
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E Q DP+ + R C D G QC+ S G+C C GV G
Sbjct: 1111 RTCSE--CQELFWGDPS----VECRACDCDPR-----GIETPQCDQSTGQCICIEGVEGP 1159
Query: 194 KCDRC 198
+CD+C
Sbjct: 1160 RCDKC 1164
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 88/248 (35%), Gaps = 79/248 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE C D Y+ + N C CNCN S L
Sbjct: 296 GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHASSCHFDMAVYLAT 354
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDS 120
S G C C+ G C++C +Y E C+ C C+PAGS
Sbjct: 355 GNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNFCEQCTCDPAGSQNG------ 408
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
G C+S S G +
Sbjct: 409 --GICDSYTDFSAGLI-------------------------------------------- 422
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G+C+CK V G+ CD C Y GCKSC CNP G++ CDS +G C CK
Sbjct: 423 AGQCRCKLYVEGEHCDICKEGFYGLSAEDPFGCKSCACNPLGTIPGGNPCDSDRGYCYCK 482
Query: 238 DNVEGAQC 245
V G C
Sbjct: 483 RLVTGQHC 490
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 101/237 (42%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C C C+ GS++ C+S G+C C GV
Sbjct: 788 GGQC-QCRPNVVGRTCDRCAPGTF-GFGPSGCKPCECHLQGSVSAFCDSITGQCHCFQGV 845
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CDSV G+C S Q + G H R
Sbjct: 846 YTRQCDRCLPGYWGF--PSCQPCQCN-----GHADDCDSVTGECLSCQDYTTG--HNCER 896
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 897 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFASSCYQDPVTLQL----ACVCNPGYIGS 952
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + + E G C+ C C+ + CD G+C +C + EG C+
Sbjct: 953 RCDDCAAGFFGNPSEVGGMCQPCHCHHNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1009
>gi|11120048|gb|AAG30822.1|AF278532_1 beta-netrin [Homo sapiens]
Length = 628
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV-QSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWCHEVPDFRPVHNKSEPAWEWEDAQ 495
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 496 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 524
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|68161843|emb|CAB70800.3| hypothetical protein [Homo sapiens]
Length = 400
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 104 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 163
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 164 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 223
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 224 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 267
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G S L G+C+CK G+ C + +
Sbjct: 268 --------GFSALLH---SGKCECKEQTLGNAKAFCGMKY 296
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 188 SNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 234
>gi|348565508|ref|XP_003468545.1| PREDICTED: laminin subunit alpha-2-like isoform 2 [Cavia porcellus]
Length = 3115
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 106/241 (43%), Gaps = 56/241 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C++C+ + C CNCN GS + C+ G+C C+PGVTG KCD
Sbjct: 938 ECRPNVQGRQCDQCKPQTFGLQSGRGCVPCNCNSFGSKSFDCDESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
C +++F E GC +C+C+ G+ NCD GQC + + T
Sbjct: 998 HCAHGYFNFQEGGCTACDCSHLGN-----NCDPQTGQCICPPNTVGEKCST--------- 1043
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
C +++ GH GSLN QCN + G+C C P +G
Sbjct: 1044 -------------CAPNSW--GHSIVTGCKPCNCSIVGSLNFQCNINTGQCDCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS---------VKGQCECKDNVEGAQ 244
KC C H++F C C+C G+ T CDS GQC CK NVEG
Sbjct: 1089 KCTTCKQGHWNFPH--CLLCDCFLPGTEAAT--CDSETQICSCSDQTGQCTCKANVEGIH 1144
Query: 245 C 245
C
Sbjct: 1145 C 1145
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 113/269 (42%), Gaps = 66/269 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNP 61
N FS C D L G C +C GP CE+C + Y+ C C CN
Sbjct: 816 NNFSPTCHLDPSL------GLICDECSVGYTGPRCERCEEGYFGHPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSVPGSCNSLSGSCLICKPGTTGRHCELCADGY--FGDAVDAKNCQPCRCNAN 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS ++ C S GQCE VQ R+ +CK T+ L
Sbjct: 924 GS--SSEICHSQTGQCECRP-----------NVQGRQ-----------CDQCKPQTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS + C+ G+C C+PGVTG KCD C +++F E GC +C+C+
Sbjct: 960 SGRGCVPCNCNSFGSKSFDCDESGQCWCQPGVTGKKCDHCAHGYFNFQEGGCTACDCSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
G+ NCD GQC C N G +C +
Sbjct: 1020 GN-----NCDPQTGQCICPPNTVGEKCST 1043
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D Y++ G
Sbjct: 344 CNCHGKAEGCYYDENVARRNLSLNIHGKYIGGGVCINCSQNTAGINCETCTDGYFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C C+P+GSL+ C + G C CK G G CDRC +
Sbjct: 404 SPNYPSPCQPCYCDPVGSLSKVCVKDEKHARRGLAPGSCHCKAGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G C+ C C+ +GS P
Sbjct: 462 GYPDCQPCNCSGSGSTNVDP 481
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C C N + S C CNC+ +GSLN QCN + G+C C P +
Sbjct: 1028 GQCI-CPPNTVGEKCSTCAPNSWGHSIVTGCKPCNCSIVGSLNFQCNINTGQCDCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
G KC C H++F C C+C G+ T CDS
Sbjct: 1087 GAKCTTCKQGHWNFPH--CLLCDCFLPGTEAAT--CDS 1120
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDRVTGLCMCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GHKCDSCQPGH 1564
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C C+G SN C D E C DCQ G CE+C YY K N C C
Sbjct: 1420 CQCHGHSNLC--DPE-------TSVCQDCQHHTAGDFCERCAVGYYGTVKGLPNDCQQCA 1470
Query: 59 C---NPIGSLNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C +P + + C +EG+ C G G C+RC + + C+ CEC+
Sbjct: 1471 CPLISPSNNFSPSCVAEGQDDHRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1531 PYGSLPVP--CDRVTGLC 1546
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G C+ C C+ +GS N D G C CK+N
Sbjct: 438 APGSCHCKAGFGGVSCDRCARGYT--GYPDCQPCNCSGSGST----NVDPCFGPCTCKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 38/139 (27%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE----------GRC 75
DC G C C+ ++ NF C C+C G+ C+SE G+C
Sbjct: 1080 DCHPKFSGAKCTTCKQGHW-----NFPHCLLCDCFLPGTEAATCDSETQICSCSDQTGQC 1134
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
CK V G CDRC + EA GC SC C SV QC +A+
Sbjct: 1135 TCKANVEGIHCDRCQSGKFGL-EAKNPHGCSSCYCF------------SVTSQCSAAE-- 1179
Query: 132 SRGRVHTELRVQSRKNFDP 150
G +H ++ +++ + P
Sbjct: 1180 --GLIHKQVTLEAEQIILP 1196
>gi|348565506|ref|XP_003468544.1| PREDICTED: laminin subunit alpha-2-like isoform 1 [Cavia porcellus]
Length = 3119
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 106/241 (43%), Gaps = 56/241 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C++C+ + C CNCN GS + C+ G+C C+PGVTG KCD
Sbjct: 938 ECRPNVQGRQCDQCKPQTFGLQSGRGCVPCNCNSFGSKSFDCDESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
C +++F E GC +C+C+ G+ NCD GQC + + T
Sbjct: 998 HCAHGYFNFQEGGCTACDCSHLGN-----NCDPQTGQCICPPNTVGEKCST--------- 1043
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
C +++ GH GSLN QCN + G+C C P +G
Sbjct: 1044 -------------CAPNSW--GHSIVTGCKPCNCSIVGSLNFQCNINTGQCDCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS---------VKGQCECKDNVEGAQ 244
KC C H++F C C+C G+ T CDS GQC CK NVEG
Sbjct: 1089 KCTTCKQGHWNFPH--CLLCDCFLPGTEAAT--CDSETQICSCSDQTGQCTCKANVEGIH 1144
Query: 245 C 245
C
Sbjct: 1145 C 1145
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 113/269 (42%), Gaps = 66/269 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNP 61
N FS C D L G C +C GP CE+C + Y+ C C CN
Sbjct: 816 NNFSPTCHLDPSL------GLICDECSVGYTGPRCERCEEGYFGHPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSVPGSCNSLSGSCLICKPGTTGRHCELCADGY--FGDAVDAKNCQPCRCNAN 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS ++ C S GQCE VQ R+ +CK T+ L
Sbjct: 924 GS--SSEICHSQTGQCECRP-----------NVQGRQ-----------CDQCKPQTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS + C+ G+C C+PGVTG KCD C +++F E GC +C+C+
Sbjct: 960 SGRGCVPCNCNSFGSKSFDCDESGQCWCQPGVTGKKCDHCAHGYFNFQEGGCTACDCSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
G+ NCD GQC C N G +C +
Sbjct: 1020 GN-----NCDPQTGQCICPPNTVGEKCST 1043
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D Y++ G
Sbjct: 344 CNCHGKAEGCYYDENVARRNLSLNIHGKYIGGGVCINCSQNTAGINCETCTDGYFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C C+P+GSL+ C + G C CK G G CDRC +
Sbjct: 404 SPNYPSPCQPCYCDPVGSLSKVCVKDEKHARRGLAPGSCHCKAGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G C+ C C+ +GS P
Sbjct: 462 GYPDCQPCNCSGSGSTNVDP 481
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C C N + S C CNC+ +GSLN QCN + G+C C P +
Sbjct: 1028 GQCI-CPPNTVGEKCSTCAPNSWGHSIVTGCKPCNCSIVGSLNFQCNINTGQCDCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
G KC C H++F C C+C G+ T CDS
Sbjct: 1087 GAKCTTCKQGHWNFPH--CLLCDCFLPGTEAAT--CDS 1120
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDRVTGLCMCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GHKCDSCQPGH 1564
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C C+G SN C D E C DCQ G CE+C YY K N C C
Sbjct: 1420 CQCHGHSNLC--DPE-------TSVCQDCQHHTAGDFCERCAVGYYGTVKGLPNDCQQCA 1470
Query: 59 C---NPIGSLNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C +P + + C +EG+ C G G C+RC + + C+ CEC+
Sbjct: 1471 CPLISPSNNFSPSCVAEGQDDHRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1531 PYGSLPVP--CDRVTGLC 1546
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G C+ C C+ +GS N D G C CK+N
Sbjct: 438 APGSCHCKAGFGGVSCDRCARGYT--GYPDCQPCNCSGSGST----NVDPCFGPCTCKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 38/139 (27%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE----------GRC 75
DC G C C+ ++ NF C C+C G+ C+SE G+C
Sbjct: 1080 DCHPKFSGAKCTTCKQGHW-----NFPHCLLCDCFLPGTEAATCDSETQICSCSDQTGQC 1134
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
CK V G CDRC + EA GC SC C SV QC +A+
Sbjct: 1135 TCKANVEGIHCDRCQSGKFGL-EAKNPHGCSSCYCF------------SVTSQCSAAE-- 1179
Query: 132 SRGRVHTELRVQSRKNFDP 150
G +H ++ +++ + P
Sbjct: 1180 --GLIHKQVTLEAEQIILP 1196
>gi|301760444|ref|XP_002916015.1| PREDICTED: multiple epidermal growth factor-like domains protein
9-like [Ailuropoda melanoleuca]
Length = 538
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C G C+ CR+ +Y C C+C+P G+L+ C S G+CQCK GVTG CD
Sbjct: 161 ECWPPYQGLRCDTCREGFYLNHTIGLCMPCDCSPHGALSSHCGSSGKCQCKVGVTGSTCD 220
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +YDF ++GC C CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 221 RCQDGYYDFSKSGCLPCRCN-----NRSASCDALTGACLNCQENSKGD-HCE---ECKEG 271
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFG 206
F + + RC G + E C QCK G TG C+ C+ +Y+
Sbjct: 272 FYQSPGATKECLRCPCSAV-TSTGSCVRKLGELEPSCVQCKEGYTGKNCNTCENGYYN-S 329
Query: 207 EAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
++ C C+C+ TP C G+C C N G C
Sbjct: 330 DSICTKCQCHSHVDSTTTPKICKPESGECIHCLHNTTGFWCE 371
>gi|296212620|ref|XP_002752924.1| PREDICTED: netrin-4 isoform 3 [Callithrix jacchus]
Length = 591
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG + C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 295 CKCNGHAETCHFDVHVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 354
Query: 54 CTACNCNPIGSLNLQCNSE-------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 355 CKPCSCHPVGSAILPANSMTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 414
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 415 --AGS------CDPITGDCTSS 428
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 379 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 425
>gi|355708161|gb|AES03182.1| netrin 4 [Mustela putorius furo]
Length = 620
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C+DCQ + +G +C++C+ +Y+ S +
Sbjct: 325 CKCNGHADACHFDISVWEASGNRSGGVCIDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 384
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 385 CKMCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCLVGYWGFGDYGCRPCDC 444
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 445 --AGS------CDPLTGDCISS 458
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 409 SNGDCPCKPGVAGPHCDRCLVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 455
>gi|156379641|ref|XP_001631565.1| predicted protein [Nematostella vectensis]
gi|156218607|gb|EDO39502.1| predicted protein [Nematostella vectensis]
Length = 1759
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 112/231 (48%), Gaps = 48/231 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG + +C FD +Y +G+ GG C DC+ + G NCE+C+ +YQ F
Sbjct: 320 CNCNGHAVKCRFDPAVYQASGNVSGGVCQDCEHNTVGRNCERCKPLHYQDPSKKFSDPDA 379
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C ACNC+P G +N +C ++ GRC CK V G +CDRC ++ G
Sbjct: 380 CIACNCDPTGGVNGGECEAKNDPAAGLVAGRCICKRNVGGVRCDRCKAGFFNLTTDNPDG 439
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CK+C CNP G++ C+ G+C T R ++ D + W L
Sbjct: 440 CKACGCNPLGTIGE---CNPDTGRC------------TCKRYVEGEDCDRCASEYWGL-- 482
Query: 161 CKRDTYPLG-------HGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
+ P G GGS + QC+ + G+C+C+ G+TG +C+R +Y
Sbjct: 483 ---SSTPAGCSNCACDVGGSYDNQCDKQTGQCRCRKGITGRQCERVKTGNY 530
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 115/287 (40%), Gaps = 63/287 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGD----NF 53
C+C G + +C + G +C + G NCE+C+D Y+ + D N
Sbjct: 257 CSCYGHAEQCLPEPGQPTTPGMVYGRCNCTHNTTGKNCERCQDGYFDVPWRPADADNPNE 316
Query: 54 CTACNCN---------PIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYD-----FGE 98
C CNCN P S G CQ C+ G C+RC HY F +
Sbjct: 317 CRKCNCNGHAVKCRFDPAVYQASGNVSGGVCQDCEHNTVGRNCERCKPLHYQDPSKKFSD 376
Query: 99 A-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
C +C C+P G V G+CE+ + G V R ++N G R
Sbjct: 377 PDACIACNCDPTGGVNG--------GECEAKNDPAAGLVAG--RCICKRNV--GGVR--- 421
Query: 158 LRRCKRDTY----------------PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 200
RCK + PLG G +CN + GRC CK V G+ CDRC
Sbjct: 422 CDRCKAGFFNLTTDNPDGCKACGCNPLGTIG----ECNPDTGRCTCKRYVEGEDCDRCAS 477
Query: 201 NHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ AGC +C C+ GS N CD GQC C+ + G QC
Sbjct: 478 EYWGLSSTPAGCSNCACDVGGSYDN--QCDKQTGQCRCRKGITGRQC 522
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C +C D +G C++C + ++ S C C+C GSL CN G+CQCK G
Sbjct: 1033 GQC-NCLPDVEGKQCDRCAEGFWNLSSGKGCQQCDCCIEGSLRSMCNQITGQCQCKAGFG 1091
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +C C+ N + GC +C CNPAGSV CD G+C
Sbjct: 1092 GPRCCECEDNFWGSPPDGCSACNCNPAGSVH--LQCDRDTGKC 1132
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ GP C +C DN++ D C+ACNCNP GS++LQC+ + G+C CK G GDKCD
Sbjct: 1086 CKAGFGGPRCCECEDNFWGSPPDG-CSACNCNPAGSVHLQCDRDTGKCLCKVGHIGDKCD 1144
Query: 88 RC 89
C
Sbjct: 1145 MC 1146
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 100/263 (38%), Gaps = 49/263 (18%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG 63
N FS C+ D + T C CQ G CE+C D YY G+ +C P
Sbjct: 909 NKFSESCYVDT---STTPPSVLCDKCQVGYTGRQCEECADGYY---GNPLVPGGSCKPCS 962
Query: 64 -SLNLQCNSEGRC--------QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVK 113
+ N+ G C QC G C+RC ++ D C SC C+ G+
Sbjct: 963 CNNNIDPTVSGNCDRLTGSCLQCLYNTAGFNCERCKPGYFGDAIARNCTSCVCDKKGTNP 1022
Query: 114 NTP-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG- 171
+C+ GQC L K D W+L G G
Sbjct: 1023 GFHYSCNHKTGQCNC------------LPDVEGKQCDRCAEGFWNLSS--------GKGC 1062
Query: 172 --------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
GSL CN G+CQCK G G +C C+ N + GC +C CNPAGSV
Sbjct: 1063 QQCDCCIEGSLRSMCNQITGQCQCKAGFGGPRCCECEDNFWGSPPDGCSACNCNPAGSVH 1122
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
CD G+C CK G +C
Sbjct: 1123 --LQCDRDTGKCLCKVGHIGDKC 1143
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 100/256 (39%), Gaps = 58/256 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGS----LNLQCNSEGRC- 75
G C+DCQ + G NCE C +Y K N C C C P GS + C +
Sbjct: 864 GVCVDCQHNTVGKNCEACAVGFYGIATKGTPNDCKRCQC-PGGSSGNKFSESCYVDTSTT 922
Query: 76 -------QCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+C+ G TG +C+ C +Y CK C CN + NCD + G C
Sbjct: 923 PPSVLCDKCQVGYTGRQCEECADGYYGNPLVPGGSCKPCSCNNNIDPTVSGNCDRLTGSC 982
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--------------PLGHG 171
++ G ++ RCK + G
Sbjct: 983 LQCLYNTAG---------------------FNCERCKPGYFGDAIARNCTSCVCDKKGTN 1021
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDS 229
+ CN + G+C C P V G +CDRC ++ GC+ C+C GS+++ C+
Sbjct: 1022 PGFHYSCNHKTGQCNCLPDVEGKQCDRCAEGFWNLSSGKGCQQCDCCIEGSLRSM--CNQ 1079
Query: 230 VKGQCECKDNVEGAQC 245
+ GQC+CK G +C
Sbjct: 1080 ITGQCQCKAGFGGPRC 1095
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+CK V G +CDRC + F GC +C+C+ G++ N C+ + GQC+C++
Sbjct: 773 GQCKCKSNVIGQRCDRCAPGSFGFSNKGCSACDCDRIGAIDNF--CNILTGQCQCRNWAS 830
Query: 242 GAQC 245
G QC
Sbjct: 831 GRQC 834
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 80/180 (44%), Gaps = 30/180 (16%)
Query: 55 TACNCNPIGSL-----NLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
ACNC+P G+ L C+ G +C+CK V G +CDRC + F GC +C+C+
Sbjct: 749 VACNCDPKGTQRDANGTLVCDPIGGQCKCKSNVIGQRCDRCAPGSFGFSNKGCSACDCDR 808
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G++ N C+ + GQC+ +S GR + + P +W C R
Sbjct: 809 IGAIDNF--CNILTGQCQCRNWAS-GR---------QCSLCPPN--MWGFPLC-RPCRCY 853
Query: 169 GHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN 223
GH S N + G C C+ G C+ C V Y G CK C+C P GS N
Sbjct: 854 GHASSCNPK---TGVCVDCQHNTVGKNCEACAVGFYGIATKGTPNDCKRCQC-PGGSSGN 909
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 99/243 (40%), Gaps = 40/243 (16%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + S C+AC+C+ IG+++ CN G+CQC+
Sbjct: 772 GGQC-KCKSNVIGQRCDRCAPGSFGFSNKG-CSACDCDRIGAIDNFCNILTGQCQCRNWA 829
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+G +C C N + F C+ C C S +C+ G C Q ++ G
Sbjct: 830 SGRQCSLCPPNMWGF--PLCRPCRCYGHAS-----SCNPKTGVCVDCQHNTVG------- 875
Query: 142 VQSRKNFDPAGNRIWDLRR------CKRDTYPLGHGGS-LNLQCNSEGRC--------QC 186
KN + + + CKR P G G+ + C + +C
Sbjct: 876 ----KNCEACAVGFYGIATKGTPNDCKRCQCPGGSSGNKFSESCYVDTSTTPPSVLCDKC 931
Query: 187 KPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEG 242
+ G TG +C+ C +Y CK C CN + NCD + G C +C N G
Sbjct: 932 QVGYTGRQCEECADGYYGNPLVPGGSCKPCSCNNNIDPTVSGNCDRLTGSCLQCLYNTAG 991
Query: 243 AQC 245
C
Sbjct: 992 FNC 994
>gi|388453233|ref|NP_001252984.1| netrin-4 precursor [Macaca mulatta]
gi|384948586|gb|AFI37898.1| netrin-4 precursor [Macaca mulatta]
Length = 628
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPITGDCSSS 465
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|380797183|gb|AFE70467.1| netrin-4 precursor, partial [Macaca mulatta]
Length = 612
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 316 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 375
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 376 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 435
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 436 --AGS------CDPITGDCSSS 449
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 400 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 446
>gi|332018204|gb|EGI58809.1| Laminin subunit beta-1 [Acromyrmex echinatior]
Length = 1757
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 112/265 (42%), Gaps = 80/265 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN +N C FD+ +Y R+G GG C DCQ + G NCE+C+ YY +
Sbjct: 323 CNCNNHTNSCHFDETVYERSGRVSGGVCDDCQHNTRGQNCEQCKPFYYHDVTKDISDPEA 382
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C C+C+ GSL+ L + GRC CK V G +CDRC +++ G
Sbjct: 383 CQPCDCDLNGSLDDGICDSRTDPLSGDESGRCHCKVNVDGRRCDRCKNGFWNYDPDNPEG 442
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C CN G++ N C+ V G+C
Sbjct: 443 CQACTCNILGTIDNQ-GCNVVTGECT---------------------------------- 467
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
CKR Y CN QC P G DR GCK C+C+P GS
Sbjct: 468 CKR--YVTAR------DCN-----QCLPEYWGLSEDR----------DGCKPCDCDPGGS 504
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+N+ CD + GQC C+ +V G C
Sbjct: 505 YENS--CDVITGQCRCRPHVSGRTC 527
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCK 78
H GHCL C + DG CE C+ +Y + C C CN +G+ + G+C C
Sbjct: 977 HTGHCLQCLFNTDGYTCEVCKAGFYGDALRQDCQDCRCNVLGTDKTAGSCDHRTGQCPCL 1036
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CD C+ NH+ GC CEC+ GS+ + C+ G CE R +
Sbjct: 1037 PHVIGQLCDACEENHWRIASGQGCDPCECDVVGSISD--RCNPYDGTCECKPGFGGRRCN 1094
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ + NF GN + C+ D GS + QC+ E G C C G+ G+KCD
Sbjct: 1095 -----ECQTNF--WGNPNVECYPCECDVI-----GSASQQCDRETGVCVCHKGIGGEKCD 1142
Query: 197 RCDVNHY 203
+CD ++
Sbjct: 1143 QCDRGYH 1149
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 107/286 (37%), Gaps = 84/286 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C C+G ++ C G C++C+ G NC++C D++Y
Sbjct: 851 CECHGHADSC---------DSKTGACINCRDFTTGHNCDRCVDDFYGDPRIGVDIPCRAC 901
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGE 98
++SG ++ +C+ + I + C+C G +G +C+ C N++ +
Sbjct: 902 PCPGTRESGHSYANSCSLDSI-------TQDVVCECFEGYSGPRCEHCAENYFGNPEIPG 954
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
C+ C CN ++ NCD G C ++ G +
Sbjct: 955 GSCQLCNCNNNTDLRRVGNCDPHTGHCLQCLFNTDG---------------------YTC 993
Query: 159 RRCKRDTYPLGHGGSLNLQC------------------NSEGRCQCKPGVTGDKCDRCDV 200
CK Y G +L C + G+C C P V G CD C+
Sbjct: 994 EVCKAGFY----GDALRQDCQDCRCNVLGTDKTAGSCDHRTGQCPCLPHVIGQLCDACEE 1049
Query: 201 NHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
NH+ GC CEC+ GS+ + C+ G CECK G +C
Sbjct: 1050 NHWRIASGQGCDPCECDVVGSISD--RCNPYDGTCECKPGFGGRRC 1093
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 92/224 (41%), Gaps = 31/224 (13%)
Query: 35 GPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-QCKPGVTGDKCDR 88
GP CE C +NY+ + C CNCN L N G C QC G C+
Sbjct: 936 GPRCEHCAENYFGNPEIPGGSCQLCNCNNNTDLRRVGNCDPHTGHCLQCLFNTDGYTCEV 995
Query: 89 CDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV-----HTELRV 142
C Y D C+ C CN G+ K +CD GQC G++ R+
Sbjct: 996 CKAGFYGDALRQDCQDCRCNVLGTDKTAGSCDHRTGQCPCLP-HVIGQLCDACEENHWRI 1054
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
S + DP C+ D GS++ +CN +G C+CKPG G +C+ C N
Sbjct: 1055 ASGQGCDP----------CECDVV-----GSISDRCNPYDGTCECKPGFGGRRCNECQTN 1099
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C CEC+ GS + CD G C C + G +C
Sbjct: 1100 FWGNPNVECYPCECDVIGSA--SQQCDRETGVCVCHKGIGGEKC 1141
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 98/217 (45%), Gaps = 41/217 (18%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
YY G + +C CNP GS +L C N G C CKP V G +CDRC Y FG GC
Sbjct: 748 YYVFDGAH---SCECNPTGSRSLLCKNYGGMCPCKPNVVGRRCDRCAPGTYGFGPEGCIP 804
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV--QSRKNFDPAGNRIWDLRRC 161
C+C+ G++ N CD G+C + R +T R Q F W+ C
Sbjct: 805 CDCDGVGALDNF--CDVETGRC-------KCRPNTYGRTCGQCEPGF-------WNFPHC 848
Query: 162 KR-DTYPLGHGGSLNLQCNSE-GRC-QCKPGVTGDKCDRCDVNHYDFGEAG----CKSCE 214
+R + + GH S C+S+ G C C+ TG CDRC + Y G C++C
Sbjct: 849 QRCECH--GHADS----CDSKTGACINCRDFTTGHNCDRCVDDFYGDPRIGVDIPCRACP 902
Query: 215 C----NPAGSVKNTPNCDSVKGQ--CECKDNVEGAQC 245
C S N+ + DS+ CEC + G +C
Sbjct: 903 CPGTRESGHSYANSCSLDSITQDVVCECFEGYSGPRC 939
>gi|156380828|ref|XP_001631969.1| predicted protein [Nematostella vectensis]
gi|156219018|gb|EDO39906.1| predicted protein [Nematostella vectensis]
Length = 270
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 99/225 (44%), Gaps = 22/225 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
GHC C G C++C Y G C ACNC+ GSL+ C S G+CQC+ G
Sbjct: 63 GHCT-CTRGFGGRKCDRCAS--YGYYGYPNCKACNCDTRGSLSTFCGSWGQCQCRMNFEG 119
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
KCD+C V +YDF CK C CNPAG + K + A+ +H L +
Sbjct: 120 LKCDQCRVGYYDFPR--CKQCGCNPAGIQSAKIAHCTCKENVQGAECEQCKSMHFGLSIF 177
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
+ K P G + G GS+ GRC CK VTG +C RC +Y
Sbjct: 178 NPKGCRPCGCNL------------NGTLGSIGDCDKDHGRCNCKAHVTGRECGRCADGYY 225
Query: 204 DFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ A GCK C C S + CD GQC C NV G C
Sbjct: 226 GYQAADTFGCKRCNCKVGNSFGSY--CDGFTGQCACMSNVGGIHC 268
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 97/193 (50%), Gaps = 33/193 (17%)
Query: 57 CNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G+L+ C+ G+C C+ V G KCDRC ++ F C+ CEC+P GSV +
Sbjct: 1 CECDPKGALDASCSKFGGQCTCRRNVVGRKCDRCMASYTGF--PNCRKCECSPVGSV--S 56
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR---DTYPLGHGG 172
P+CD V G C +RG RK A + CK DT G
Sbjct: 57 PDCD-VTGHC----TCTRG-------FGGRKCDRCASYGYYGYPNCKACNCDTR-----G 99
Query: 173 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
SL+ C S G+CQC+ G KCD+C V +YDF CK C CNPAG +
Sbjct: 100 SLSTFCGSWGQCQCRMNFEGLKCDQCRVGYYDFPR--CKQCGCNPAGIQ------SAKIA 151
Query: 233 QCECKDNVEGAQC 245
C CK+NV+GA+C
Sbjct: 152 HCTCKENVQGAEC 164
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 108/228 (47%), Gaps = 30/228 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
GG C C+ + G C++C +Y +G C C C+P+GS++ C+ G C C G
Sbjct: 16 FGGQCT-CRRNVVGRKCDRCMASY---TGFPNCRKCECSPVGSVSPDCDVTGHCTCTRGF 71
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G KCDRC Y +G CK+C C+ GS+ C S GQC+ +++ G + R
Sbjct: 72 GGRKCDRCASYGY-YGYPNCKACNCDTRGSLSTF--CGSW-GQCQ-CRMNFEGLKCDQCR 126
Query: 142 VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
V +D RCK+ P G +Q C CK V G +C++C
Sbjct: 127 VG-----------YYDFPRCKQCGCNPAG------IQSAKIAHCTCKENVQGAECEQCKS 169
Query: 201 NHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
H+ F GC+ C CN G++ + +CD G+C CK +V G +C
Sbjct: 170 MHFGLSIFNPKGCRPCGCNLNGTLGSIGDCDKDHGRCNCKAHVTGREC 217
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 78/187 (41%), Gaps = 20/187 (10%)
Query: 15 ELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
L G G C C+ + +G C++CR YY C C CNP G +Q
Sbjct: 100 SLSTFCGSWGQC-QCRMNFEGLKCDQCRVGYYDFP---RCKQCGCNPAG---IQSAKIAH 152
Query: 75 CQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C CK V G +C++C H+ F GC+ C CN G++ + +CD G+C
Sbjct: 153 CTCKENVQGAECEQCKSMHFGLSIFNPKGCRPCGCNLNGTLGSIGDCDKDHGRCNC---- 208
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGV 190
+ H R R G + D CKR +G+ S C+ G+C C V
Sbjct: 209 ---KAHVTGRECGRCADGYYGYQAADTFGCKRCNCKVGN--SFGSYCDGFTGQCACMSNV 263
Query: 191 TGDKCDR 197
G CDR
Sbjct: 264 GGIHCDR 270
>gi|224073357|ref|XP_002193877.1| PREDICTED: multiple epidermal growth factor-like domains protein 9
[Taeniopygia guttata]
Length = 437
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C GP C C ++ + G C C+C+P G+ + QC+ GRCQCK GVT KCDR
Sbjct: 59 CLAGYAGPRCHSCAHGFFPQQGSQQCQPCSCSPAGATSEQCDHSGRCQCKVGVTDLKCDR 118
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C +Y F E C+ C+CN ++ CD+ G C Q ++ G+ H EL ++ F
Sbjct: 119 CSEGYYRFNETTCEPCQCN-----NHSHTCDNSTGTCLDCQENTEGK-HCEL---CKEGF 169
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRC-QCKPGVTGDKCDRCDVNHYDFG 206
+ + + C + G+ +LQ S RC +CKPG TG C++CD +Y+
Sbjct: 170 YRSTHPAHGCQHCPCSI--VASTGTCHLQPGQSVPRCDKCKPGYTGLNCNQCDKGYYN-S 226
Query: 207 EAGCKSCECN 216
++ C CECN
Sbjct: 227 DSICVRCECN 236
>gi|426373741|ref|XP_004053748.1| PREDICTED: netrin-4 isoform 3 [Gorilla gorilla gorilla]
Length = 605
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 31/169 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNMWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS + NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVIPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR 154
AGS CD + G C S+ HT++ +F P N+
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNK 484
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|307180901|gb|EFN68709.1| Laminin subunit beta-1 [Camponotus floridanus]
Length = 2183
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 111/265 (41%), Gaps = 80/265 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNCN + C FD+ +Y R+G GG C DCQ + G NCE+C+ YY S
Sbjct: 749 CNCNNHTTSCHFDEAVYERSGRVSGGVCDDCQHNTRGQNCEQCKPFYYHDMTKFISDPEA 808
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C C+C+ GSL+ L + GRC CK V G +CDRC ++F G
Sbjct: 809 CQPCDCDLGGSLDDGICDSRTDLLSGDESGRCHCKANVEGRRCDRCKNGFWNFNPDSLEG 868
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C CN G+V N C+ + G+C
Sbjct: 869 CQACTCNTLGTVDNQ-GCNVITGECT---------------------------------- 893
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
CKR Y CN QC P G DR GCK C+C+P GS
Sbjct: 894 CKR--YVTAR------DCN-----QCLPEYWGLSEDR----------DGCKPCDCDPGGS 930
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+N+ CD + GQC C+ +V G C
Sbjct: 931 YENS--CDVITGQCRCRPHVSGRTC 953
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 97/203 (47%), Gaps = 25/203 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL--QCNSE-GRCQCK 78
H GHCL C DGPNCE C+ +Y + C C CN +G+ CN G+C C
Sbjct: 1403 HTGHCLQCLFYTDGPNCEICKSGFYGDALQQNCQDCRCNVLGTDKTAGSCNHRTGQCPCL 1462
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CD C+ NH+ GC CEC+ GS+ + C+ G CE R +
Sbjct: 1463 PHVMGQLCDSCEENHWRIASGQGCDPCECDAIGSISD--RCNPFDGTCECKPGFGGRRCN 1520
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ + NF GN + C+ D GS + QC+ E G C C G+ G+KCD
Sbjct: 1521 -----ECQTNF--WGNPNVECYPCECDVI-----GSASQQCDRETGLCVCHKGIGGEKCD 1568
Query: 197 RCDVNHYDFGEAGCKSCECNPAG 219
+CD ++ GEA +C+P G
Sbjct: 1569 QCDRGYH--GEAP----QCSPCG 1585
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 46 YQKSGDNFCT----ACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG 100
YQ S F +C CNP GS +L C N G C CK V G +CDRC Y FG G
Sbjct: 1168 YQNSIGYFVFDGAHSCECNPTGSRSLLCENYGGMCPCKSNVVGRRCDRCAPGTYGFGPEG 1227
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCE 126
C C+C+ G++ N CD G+C+
Sbjct: 1228 CIPCDCDGVGALDNF--CDVETGRCK 1251
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 91/233 (39%), Gaps = 49/233 (21%)
Query: 35 GPNCEKCRDNYY--------------QKSGDNFCTACNCNPIGSLNLQCNSEGRC-QCKP 79
GP CE C +NYY + + A NC+P G C QC
Sbjct: 1362 GPRCEHCAENYYGNPEIPGGNCELCNCNNNTDLRRAGNCDP---------HTGHCLQCLF 1412
Query: 80 GVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV-- 136
G C+ C Y D + C+ C CN G+ K +C+ GQC G++
Sbjct: 1413 YTDGPNCEICKSGFYGDALQQNCQDCRCNVLGTDKTAGSCNHRTGQCPCLP-HVMGQLCD 1471
Query: 137 ---HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
R+ S + DP C+ D GS++ +CN +G C+CKPG G
Sbjct: 1472 SCEENHWRIASGQGCDP----------CECDAI-----GSISDRCNPFDGTCECKPGFGG 1516
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+ C N + C CEC+ GS CD G C C + G +C
Sbjct: 1517 RRCNECQTNFWGNPNVECYPCECDVIGSASQ--QCDRETGLCVCHKGIGGEKC 1567
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
+GG C C+ + G C++C Y G C C+C+ +G+L+ C+ E GRC+C+P
Sbjct: 1198 YGGMC-PCKSNVVGRRCDRCAPGTY-GFGPEGCIPCDCDGVGALDNFCDVETGRCKCRPN 1255
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C +C+ ++F C+ CECN + +CDS G C
Sbjct: 1256 TYGRTCGQCEPGFWNFPH--CQRCECN-----GHADSCDSKTGAC 1293
>gi|402887298|ref|XP_003907033.1| PREDICTED: netrin-4-like, partial [Papio anubis]
Length = 514
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPITGDCSSS 465
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>gi|397520460|ref|XP_003830335.1| PREDICTED: laminin subunit alpha-3 isoform 2 [Pan paniscus]
Length = 3277
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 125/278 (44%), Gaps = 56/278 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 356 CNCHGHASDCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C + +Y+F C
Sbjct: 416 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAIGYYNF-----PFCLR 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW---------- 156
P V + D V G + + G V E+ D G W
Sbjct: 470 IPIFPVSTPSSEDPVAGDIKGCDCNLEG-VLPEI-------CDAHG---WCLCRPGVEGP 518
Query: 157 --DLRRCKRDTYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE 207
D R ++P+ GS + C+S G+C+C+PGVTG +CDRC YDF
Sbjct: 519 RCDTCRSGFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGVYDFPH 578
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
S C+PAG++ +S G C+CK +VEG C
Sbjct: 579 CQGSSSACDPAGTI------NSNLGYCQCKLHVEGPTC 610
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 44/238 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 507 GWCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ +S G C+ ++H E
Sbjct: 563 GQRCDRCLSGVYDFPHCQGSSSACDPAGTI------NSNLGYCQC-------KLHVEGPT 609
Query: 143 QSRKNFDPAGNRIWDLR----------RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
SR W+L +C + G G +C +G C CK V
Sbjct: 610 CSRCKL-----LYWNLDKENPSGCSECKCHKAGTVSGTG-----ECRQGDGDCHCKSHVG 659
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 660 GDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSM--CSGPSGVCQCREHVVGKVCQ 715
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 99/251 (39%), Gaps = 54/251 (21%)
Query: 12 FDKELYNRT--GHGGHCLDCQ-GDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ 68
DK L T G LD Q R N + +Y K C C+P G+
Sbjct: 1222 MDKSLEFITNCGKNSFYLDPQTASRFCKNSARSLVAFYHKGA----LPCECHPTGATGPH 1277
Query: 69 CNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN--PAGSVKNTPNCDSVKGQC 125
C+ EG +C C+P V G +C C HY F CK C C P C+ + GQC
Sbjct: 1278 CSPEGGQCPCQPNVIGRQCTHCATGHYGFPR--CKPCSCGRCP---------CEEMTGQC 1326
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPA-----------GNRIWDLRRCKRDTYPLGHGGSL 174
+ R + E+ +F P G + C RD+
Sbjct: 1327 RCPPRTVRPQC--EVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDS--------- 1375
Query: 175 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
G+C+CKP +TG +CDRC Y F E C C CN G+ CD G C
Sbjct: 1376 -------GQCRCKPRITGRQCDRCASGFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1424
Query: 235 ECKDNVEGAQC 245
CK+NVEG +C
Sbjct: 1425 LCKENVEGTEC 1435
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE C++ YY + C AC C
Sbjct: 1687 CNCNGHSNRC---------QDGSGICVNCQHNTAGEHCEHCQEGYYGNAVHGSCRACPCP 1737
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1738 HTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 1796
Query: 114 NTPNCDSVKGQC 125
+C + G C
Sbjct: 1797 ---SCHPLTGDC 1805
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 102/264 (38%), Gaps = 63/264 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN--------------PIGSLN 66
+CQ G C++C Y Q+ + C ACNC+ SLN
Sbjct: 320 ECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASDCYYDPDVERQQASLN 379
Query: 67 LQCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPN 117
Q G C+ G C++C +Y +G GC C C+P ++
Sbjct: 380 TQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDP----EHADG 435
Query: 118 CDSVKGQ-----------CESAQLSSRG-----RVHTELRVQSRKNFDPAGNRIWDLRRC 161
C+ G+ CE + R+ V + + DP D++ C
Sbjct: 436 CEQGSGRCHCKPNFHGDNCEKCAIGYYNFPFCLRIPI-FPVSTPSSEDPVAG---DIKGC 491
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+ G L C++ G C C+PGV G +CD C Y F C++C C+ GS
Sbjct: 492 DCNL-----EGVLPEICDAHGWCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSY 544
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ C SV GQCEC+ V G +C
Sbjct: 545 QMP--CSSVTGQCECRPGVTGQRC 566
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 654 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKV 713
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 714 CQRPENNYY 722
>gi|145699097|ref|NP_067383.3| usherin precursor [Mus musculus]
gi|342187108|sp|Q2QI47.2|USH2A_MOUSE RecName: Full=Usherin; AltName: Full=Usher syndrome type IIa
protein homolog; AltName: Full=Usher syndrome type-2A
protein homolog; Flags: Precursor
Length = 5193
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 127/266 (47%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG---- 50
C C+G ++ C +D + +NR G GG C DCQ G +CE C+D +Y+ G
Sbjct: 572 CQCHGHASSCHYDASVDPFPLEHNRGG-GGVCDDCQHHTTGRHCESCQDYFYRPVGADPA 630
Query: 51 -DNFCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
+ C C+CN G+ N L C+ G +C CK V+G +C +C YD GC+
Sbjct: 631 APDACKLCDCNRAGTRNGSLHCDPIGGQCDCKRRVSGRQCLQCQDGFYDLQALDPDGCRP 690
Query: 104 CECNPAGSVKNTPNCDSVKGQ--CESAQLSSR-GRVHTELRVQSRKNFDPAGNRIWDLRR 160
C CNP+G+V C GQ C++ + R R + + N D
Sbjct: 691 CNCNPSGTVDGDITCHQNSGQCSCKANVIGLRCNRCNFGFKFLQSFNGD-------GCEP 743
Query: 161 CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
C+ + + GS+N C+ G+C CK G KCD C N Y + C+ C+C+ AG
Sbjct: 744 CQCNLH-----GSVNQLCDPLSGQCACKKEAKGLKCDSCRENFYGLPWSACEVCDCSKAG 798
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
S T CD+ GQC CK NV G QC
Sbjct: 799 SQPGT-VCDTETGQCVCKPNVGGRQC 823
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C+ Y+ ++ + C CNC +G++N L+C+ S G+C CK
Sbjct: 810 GQCV-CKPNVGGRQCSQCKAGYFNLYQNDSHLCLTCNCEKMGTVNGSLRCDKSTGQCPCK 868
Query: 79 PGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C +C + ++ GC++C+C+ G++ + CD + GQC
Sbjct: 869 LGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGS-MCDPISGQC---------- 917
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYP---------LGH-GGSLNLQCNS 180
L + R+ RRC++ + P L H G+++ CNS
Sbjct: 918 ----LCLPHRQG-----------RRCEQCQPGFYSSPSNATGCLPCLCHTAGAVSHICNS 962
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C P TG C +C +++ F C+ C C+ AG+ T CD+V GQC C
Sbjct: 963 VTGQCSCHDPSTTGRSCHQCQESYFRFDPLTGRCRPCHCHVAGASNGT--CDAVTGQCFC 1020
Query: 237 KDNVEGAQC 245
K+ V G++C
Sbjct: 1021 KEFVTGSKC 1029
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C+ + + + DN C AC+C+ +G+L C+ G+C C P G
Sbjct: 867 CKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGSMCDPISGQCLCLPHRQGR 926
Query: 85 KCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ AG+V + C+SV GQC S+ GR + +
Sbjct: 927 RCEQCQPGFYSSPSNATGCLPCLCHTAGAVSHI--CNSVTGQCSCHDPSTTGRSCHQCQ- 983
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC--- 198
+S FDP R R C G+ N C++ G+C CK VTG KCD C
Sbjct: 984 ESYFRFDPLTGRC---RPCHCHV-----AGASNGTCDAVTGQCFCKEFVTGSKCDTCVPG 1035
Query: 199 ----DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
DVN+ G + S + P G V+++ + EC +
Sbjct: 1036 ASHLDVNNL-LGCSKTPSQQPPPRGWVQSSSTINVSWSPPECPN 1078
>gi|449278842|gb|EMC86581.1| Laminin subunit beta-1 [Columba livia]
Length = 1718
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 108/231 (46%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG S++C FD +Y TG+ GG C DCQ + G NCE+C+ Y+Q +
Sbjct: 272 CNCNGHSSQCHFDMAVYMTTGNTSGGVCDDCQHNTIGRNCEQCKPFYFQHPERDLRDPDV 331
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C CNC+P GS N G+C+CK V G++CD C Y AG
Sbjct: 332 CEPCNCDPAGSQNGGICDRYTDFSTGLIAGQCRCKLFVEGERCDLCKEGFYGLSADDPAG 391
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
C+SC CNP G+ CDS G C R+ + + D W L
Sbjct: 392 CQSCACNPLGTHPGGNPCDSETGNCYCK------------RLVTGRQCDRCLPEHWGLSN 439
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C+SE G+C+C+P + G +C++ + +Y
Sbjct: 440 DMDGCRPCDCDL-----GGALNNNCSSETGQCECRPHMFGRQCNQVEPGYY 485
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 103/258 (39%), Gaps = 53/258 (20%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY-------------------QKSGDNFCTACNCNPI 62
+ G CL C+ G NCE+C+ YY +SG F + C +P+
Sbjct: 810 YTGECLSCRDHTAGHNCERCQAGYYGDPVLGSGDHCRPCPCPDGPESGRQFSSGCYQDPV 869
Query: 63 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCD 119
LQ C C G G +CD C + D C+ C+CN + CD
Sbjct: 870 ---TLQV----VCVCSVGYIGSRCDECASGFFGSPDEVGGACQPCQCNNNIDTTDPEACD 922
Query: 120 SVKGQC---------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
G C E+ L +G + L+ RK N + +R D
Sbjct: 923 KKTGTCVKCLYHTEGENCHLCRQGYYGSALQQDCRKC---VCNYLGTVREDCED------ 973
Query: 171 GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCD 228
S N QC + G+C+C P V G CDRC N + +GC+ C C+PA S+ P C+
Sbjct: 974 --SENCQCEAATGQCRCLPNVVGQTCDRCAPNTWRLASGSGCEQCGCDPARSLG--PACN 1029
Query: 229 SVKGQCECKDNVEGAQCR 246
GQC+C G CR
Sbjct: 1030 EFTGQCQCMPGFGGRTCR 1047
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVN 92
P + C++ + S TA C C+P GSL+ C+ S G+CQC+P V G +CDRC
Sbjct: 687 PMTDVCKNIIFSISALLHETALSCQCDPQGSLSSVCDPSGGQCQCRPNVVGRQCDRCAPG 746
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GC+SCEC+ GS CD+ GQC
Sbjct: 747 TFGFGPSGCRSCECHVRGSYNTF--CDAETGQC 777
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ S G+CQC+P V G +CDRC + FG +GC+SCEC+ GS CD+
Sbjct: 716 GSLSSVCDPSGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRSCECHVRGSYNTF--CDAE 773
Query: 231 KGQCECKDNVEGAQC 245
GQC C V G QC
Sbjct: 774 TGQCHCFPGVYGRQC 788
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 121/285 (42%), Gaps = 55/285 (19%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHC+ C+ + G NCE+C D Y+ +
Sbjct: 208 CFCYGHASECAPVDGFNEEVEGMVH--GHCM-CRHNTKGLNCEQCLDFYHDLPWRPAEGR 264
Query: 50 GDNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN S + S G C C+ G C++C ++ E
Sbjct: 265 NSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVCDDCQHNTIGRNCEQCKPFYFQHPER 324
Query: 100 G------CKSCECNPAGSVKNTPNCDS--------VKGQCESAQLSSRGRVHT-ELRVQS 144
C+ C C+PAGS +N CD + GQC R +
Sbjct: 325 DLRDPDVCEPCNCDPAGS-QNGGICDRYTDFSTGLIAGQCRCKLFVEGERCDLCKEGFYG 383
Query: 145 RKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH 202
DPAG C+ PLG N C+SE G C CK VTG +CDRC H
Sbjct: 384 LSADDPAG--------CQSCACNPLGTHPGGN-PCDSETGNCYCKRLVTGRQCDRCLPEH 434
Query: 203 YDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ GC+ C+C+ G++ N NC S GQCEC+ ++ G QC
Sbjct: 435 WGLSNDMDGCRPCDCDLGGALNN--NCSSETGQCECRPHMFGRQC 477
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 93
G C++C N ++ + + C C C+P SL CN G+CQC PG G C C
Sbjct: 994 GQTCDRCAPNTWRLASGSGCEQCGCDPARSLGPACNEFTGQCQCMPGFGGRTCRECQELF 1053
Query: 94 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ C++C+CNP G TP CD GQC
Sbjct: 1054 WGDPSVECQACDCNPRGI--QTPQCDRATGQC 1083
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 93/237 (39%), Gaps = 36/237 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
GG C C+ + G C++C + G + C +C C+ GS N C++E G+C C PGV
Sbjct: 726 GGQC-QCRPNVVGRQCDRCAPGTF-GFGPSGCRSCECHVRGSYNTFCDAETGQCHCFPGV 783
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CDRC + F G + +C G+C S + + G H R
Sbjct: 784 YGRQCDRCLPGFWGFPSNG-------------HADDCSPYTGECLSCRDHTAG--HNCER 828
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS---------EGRCQCKPGVTG 192
Q+ DP R C P G Q +S + C C G G
Sbjct: 829 CQAGYYGDPVLGSGDHCRPC-----PCPDGPESGRQFSSGCYQDPVTLQVVCVCSVGYIG 883
Query: 193 DKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+CD C + D C+ C+CN + CD G C +C + EG C
Sbjct: 884 SRCDECASGFFGSPDEVGGACQPCQCNNNIDTTDPEACDKKTGTCVKCLYHTEGENC 940
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNH 93
G C +C++ ++ C AC+CNP G QC+ + G+C C GV G +CD+C +
Sbjct: 1043 GRTCRECQELFWGDPSVE-CQACDCNPRGIQTPQCDRATGQCICNEGVEGPRCDKCSRGY 1101
Query: 94 YDF 96
F
Sbjct: 1102 SGF 1104
>gi|344263979|ref|XP_003404072.1| PREDICTED: laminin subunit alpha-2 [Loxodonta africana]
Length = 3083
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 116/265 (43%), Gaps = 59/265 (22%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C + RTG +C+ + G C +C+ + C CNC
Sbjct: 885 CNVNGSFSEVC------HARTGQ----CECRPNVQGWKCNECKPETFGLQSARGCVPCNC 934
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCD C ++ F E GC +C+C G+ NCD
Sbjct: 935 NSFGSKSFDCEESGQCWCQPGVTGKKCDHCAHGYFKFQEGGCTACDCAHLGN-----NCD 989
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT--YPLGHG------ 171
G+C P +C +T Y + G
Sbjct: 990 PKTGRC----------------------ICPPNTVGEKCSKCVPNTWGYSIISGCKVCNC 1027
Query: 172 ---GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
GSL++QCN + G+C+C P +G KC C + H+++ C C+C G+ T +
Sbjct: 1028 SLVGSLDIQCNINTGQCKCHPKFSGAKCTECKLGHWNYPH--CDLCDCFLPGTDGTTCDT 1085
Query: 228 DSVK-------GQCECKDNVEGAQC 245
++ K GQC CK NVEG C
Sbjct: 1086 ETKKCSCSDQTGQCTCKMNVEGVHC 1110
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 108/267 (40%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 781 NNFSPTCHLDRSL------GLICDECPVGYTGPRCERCAEGYFGQPSIPGGSCQPCQCND 834
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 835 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNVN 888
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C + GQCE R N + W CK +T+ L
Sbjct: 889 GSFSEV--CHARTGQCEC-----------------RPNV-----QGWKCNECKPETFGLQ 924
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCD C ++ F E GC +C+C
Sbjct: 925 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDHCAHGYFKFQEGGCTACDCAHL 984
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 985 GN-----NCDPKTGRCICPPNTVGEKC 1006
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 309 CNCHGKAEECYYDENVARRNLSLNIRGKYLGGGVCINCTQNTAGINCETCIDGFFRPKGV 368
Query: 52 N-----FCTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
+ C C+C+P GSLN C + G C CK G G CDRC +
Sbjct: 369 SPKYPRPCQPCHCDPTGSLNEVCVKDEKHARRGLAPGSCHCKSGFGGVSCDRCARGYT-- 426
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G C+SC C+ GS P
Sbjct: 427 GYPSCQSCNCSGIGSRNEDP 446
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 107/260 (41%), Gaps = 50/260 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN F ++ F +E G C CQ G C+ C Y+ K + CTAC+C
Sbjct: 932 CNCNSFGSKSFDCEE-------SGQCW-CQPGVTGKKCDHCAHGYF-KFQEGGCTACDCA 982
Query: 61 PIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNC 118
+G+ C+ + GRC C P G+KC +C N + + +GCK C C+ GS+ C
Sbjct: 983 HLGN---NCDPKTGRCICPPNTVGEKCSKCVPNTWGYSIISGCKVCNCSLVGSLDI--QC 1037
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQ 177
+ GQC+ S + TE ++ W+ C D + G G+
Sbjct: 1038 NINTGQCKCHPKFSGAKC-TECKLGH-----------WNYPHCDLCDCFLPGTDGT---T 1082
Query: 178 CNSE----------GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNT 224
C++E G+C CK V G CDRC + GC SC C A T
Sbjct: 1083 CDTETKKCSCSDQTGQCTCKMNVEGVHCDRCRPGKFGLDAKNPLGCSSCYCFSA-----T 1137
Query: 225 PNCDSVKGQCECKDNVEGAQ 244
C KG + + Q
Sbjct: 1138 SQCSEAKGLIRTRVTLNPEQ 1157
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y +S C C C+P GSL + C+ G C C+PG T
Sbjct: 1459 CSACPRGYEGQYCERCAPGYTGSPRSPGGSCQECECDPHGSLPVPCDPVTGLCTCRPGAT 1518
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1519 GQKCDGCKHWH 1529
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G C+SC C+ GS N D G C CK+N
Sbjct: 403 APGSCHCKSGFGGVSCDRCARGYT--GYPSCQSCNCSGIGSR----NEDPCFGPCNCKEN 456
Query: 240 VEGAQCRS 247
VEG C S
Sbjct: 457 VEGGDCSS 464
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C D E C +CQ G CE+C YY K N C C
Sbjct: 1385 CQCNGHSSLC--DPE-------TSKCQNCQHHTGGDFCERCALGYYGIVKGSPNDCRQCA 1435
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1436 CPLISSSNNFSPTCVMEGLDDYRCSACPRGYEGQYCERCAPGYTGSPRSPGGSCQECECD 1495
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1496 PHGSLPVP--CDPVTGLC 1511
>gi|440911188|gb|ELR60894.1| Multiple epidermal growth factor-like domains protein 9, partial
[Bos grunniens mutus]
Length = 489
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 109/226 (48%), Gaps = 22/226 (9%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G CE C + +Y C C+CNP G+L+ C+S G+CQCK GVTG CD
Sbjct: 112 ECQPGYQGLRCETCTEGFYLNGTSGRCLPCDCNPRGALSTVCSSSGKCQCKVGVTGSSCD 171
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH----TELRVQ 143
RC +YDF E GC C+CN + +CD++ G C + Q +S G H TE Q
Sbjct: 172 RCQDGYYDFNENGCLPCQCN-----NRSASCDALTGACFNCQDNSEGD-HCEECTEGFYQ 225
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNH 202
S P G++ + RC G + SE C QCK G TG C+ C+ +
Sbjct: 226 S-----PDGSK--ECLRCPCSAV-TSTGSCIIKLGESEPECVQCKDGYTGQNCNDCNHGY 277
Query: 203 YDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
Y+ ++ C C+C+ TP C+ G+C C N G C
Sbjct: 278 YN-SDSICVECQCHGHVDPVKTPRVCEPESGECISCLHNTTGFWCE 322
>gi|71081706|gb|AAZ23164.1| usherin [Mus musculus]
Length = 5193
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 127/266 (47%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG---- 50
C C+G ++ C +D + +NR G GG C DCQ G +CE C+D +Y+ G
Sbjct: 572 CQCHGHASSCHYDASVDPFPLEHNRGG-GGVCDDCQHHTTGRHCESCQDYFYRSVGADPA 630
Query: 51 -DNFCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
+ C C+CN G+ N L C+ G +C CK V+G +C +C YD GC+
Sbjct: 631 APDACKLCDCNRAGTRNGSLHCDPIGGQCDCKRRVSGRQCLQCQDGFYDLQALDPDGCRP 690
Query: 104 CECNPAGSVKNTPNCDSVKGQ--CESAQLSSR-GRVHTELRVQSRKNFDPAGNRIWDLRR 160
C CNP+G+V C GQ C++ + R R + + N D
Sbjct: 691 CNCNPSGTVDGDITCHQNSGQCSCKANVIGLRCNRCNFGFKFLQSFNGD-------GCEP 743
Query: 161 CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
C+ + + GS+N C+ G+C CK G KCD C N Y + C+ C+C+ AG
Sbjct: 744 CQCNLH-----GSVNQLCDPLSGQCACKKEAKGLKCDSCRENFYGLPWSACEVCDCSKAG 798
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
S T CD+ GQC CK NV G QC
Sbjct: 799 SQPGT-VCDTETGQCVCKPNVGGRQC 823
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C+ Y+ ++ + C CNC +G++N L+C+ S G+C CK
Sbjct: 810 GQCV-CKPNVGGRQCSQCKAGYFNLYQNDSHLCLTCNCEKMGTVNGSLRCDKSTGQCPCK 868
Query: 79 PGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C +C + ++ GC++C+C+ G++ + CD + GQC
Sbjct: 869 LGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGS-MCDPISGQC---------- 917
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYP---------LGH-GGSLNLQCNS 180
L + R+ RRC++ + P L H G+++ CNS
Sbjct: 918 ----LCLPHRQG-----------RRCEQCQPGFYSSPSNATGCLPCLCHTAGAVSHICNS 962
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C P TG C +C +++ F C+ C C+ AG+ T CD+V GQC C
Sbjct: 963 VTGQCSCHDPSTTGRSCHQCQESYFRFDPLTGRCRPCHCHVAGASNGT--CDAVTGQCFC 1020
Query: 237 KDNVEGAQC 245
K+ V G++C
Sbjct: 1021 KEFVTGSKC 1029
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C+ + + + DN C AC+C+ +G+L C+ G+C C P G
Sbjct: 867 CKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGSMCDPISGQCLCLPHRQGR 926
Query: 85 KCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ AG+V + C+SV GQC S+ GR + +
Sbjct: 927 RCEQCQPGFYSSPSNATGCLPCLCHTAGAVSHI--CNSVTGQCSCHDPSTTGRSCHQCQ- 983
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC--- 198
+S FDP R R C G+ N C++ G+C CK VTG KCD C
Sbjct: 984 ESYFRFDPLTGRC---RPCHCHV-----AGASNGTCDAVTGQCFCKEFVTGSKCDTCVPG 1035
Query: 199 ----DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
DVN+ G + S + P G V+++ + EC +
Sbjct: 1036 ASHLDVNNL-LGCSKTPSQQPPPRGWVQSSSTINVSWSPPECPN 1078
>gi|395816434|ref|XP_003781707.1| PREDICTED: laminin subunit alpha-2 isoform 1 [Otolemur garnettii]
Length = 3119
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 115/269 (42%), Gaps = 67/269 (24%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS+ C + RTG C+ + G C++C+ + C CNC
Sbjct: 917 CNPNGSFSDIC------HPRTGQ----CQCRANVRGQRCDECKPGTFGLQSARGCAPCNC 966
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C+ G+C C+PGV G KCD C +++F E GC +CEC+ G+ NCD
Sbjct: 967 NSFGSKSFDCDESGQCWCQPGVAGKKCDHCAHGYFNFQEGGCTACECSHLGN-----NCD 1021
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
G+C P +C +T+ GH
Sbjct: 1022 PKTGRC----------------------ICPPNTVGEKCSKCAPNTW--GHSIITGCKAC 1057
Query: 172 -----GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN G+C C P +G KC C+ H++F C C+C G+ +
Sbjct: 1058 NCSTVGSLDFQCNVHTGQCNCHPKFSGTKCAECNRGHWNFPH--CNLCDCFLPGT--DAA 1113
Query: 226 NCDS---------VKGQCECKDNVEGAQC 245
CDS GQC CK NVEG C
Sbjct: 1114 TCDSETKQCSCRDQTGQCTCKVNVEGVHC 1142
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 813 NNFSPTCHLDRSL------GLICDECPVGHTGPRCERCAEGYFGQPSVPGGSCQPCQCND 866
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CNP
Sbjct: 867 ----NLDFSIPGSCDSLSGACLICKPGTTGQYCELCADGY--FGDAVDAKNCQPCRCNPN 920
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS + C GQC Q R N G R CK T+ L
Sbjct: 921 GSFSDI--CHPRTGQC-----------------QCRANV--RGQRC---DECKPGTFGLQ 956
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C+ G+C C+PGV G KCD C +++F E GC +CEC+
Sbjct: 957 SARGCAPCNCNSFGSKSFDCDESGQCWCQPGVAGKKCDHCAHGYFNFQEGGCTACECSHL 1016
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1017 GN-----NCDPKTGRCICPPNTVGEKC 1038
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIHGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C C+ IGS+N C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCRCDLIGSINEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGY--M 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK C C+ +GS P
Sbjct: 462 GYPACKPCNCSGSGSTNEDP 481
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 83/225 (36%), Gaps = 64/225 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN G+C C P +
Sbjct: 1025 GRCI-CPPNTVGEKCSKCAPNTWGHSIITGCKACNCSTVGSLDFQCNVHTGQCNCHPKFS 1083
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C+ H++F C C+C G+ + CDS QC
Sbjct: 1084 GTKCAECNRGHWNFPH--CNLCDCFLPGT--DAATCDSETKQCS---------------- 1123
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C+ T G+C CK V G CDRC
Sbjct: 1124 ------------------CRDQT----------------GQCTCKVNVEGVHCDRCRPGK 1149
Query: 203 YDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+ GC SC C A T C +G + + ++ Q
Sbjct: 1150 FGLDARNPLGCSSCYCFGA-----TTQCSEAEGLIQARVTLKADQ 1189
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 103/254 (40%), Gaps = 60/254 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G CL+C+ GP C KC +Y +NF C+ + SL
Sbjct: 768 GECLNCKDHTGGPYCNKCLPGFYGDPTKGTSEDCQPCACPLNIPSNNFSPTCHLD--RSL 825
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDS 120
L C+ +C G TG +C+RC + FG+ C+ C+CN +CDS
Sbjct: 826 GLICD-----ECPVGHTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIPGSCDS 878
Query: 121 VKGQCESAQLSSRGRVHTEL-------RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
+ G C + + G+ + EL KN P RC + GS
Sbjct: 879 LSGACLICKPGTTGQ-YCELCADGYFGDAVDAKNCQPC--------RCNPN-------GS 922
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVK 231
+ C+ G+CQC+ V G +CD C + A GC C CN GS + +CD
Sbjct: 923 FSDICHPRTGQCQCRANVRGQRCDECKPGTFGLQSARGCAPCNCNSFGS--KSFDCDE-S 979
Query: 232 GQCECKDNVEGAQC 245
GQC C+ V G +C
Sbjct: 980 GQCWCQPGVAGKKC 993
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1491 CTACPRGFEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGLCTCRPGAT 1550
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1551 GKKCDGCKHWH 1561
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK C C+ +GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGY--MGYPACKPCNCSGSGST----NEDPCFGPCNCKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C C+G S+ C D E C +CQ G CE+C YY K N C C
Sbjct: 1417 CQCHGHSSLC--DPET-------SVCQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1467
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1468 CPLISSSNNFSPSCLPEGVDDYRCTACPRGFEGQYCERCAPGYTGSPSSPGGSCQECECD 1527
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1528 PYGSLPVP--CDPVTGLC 1543
>gi|2627429|gb|AAC51867.1| laminin alpha 3b chain [Homo sapiens]
Length = 1486
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 120/268 (44%), Gaps = 37/268 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ GG C++CQ + G NCE+C YY+ G
Sbjct: 320 CNCHGHASNCYYDPDVERHEASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 379
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C + Y+F C
Sbjct: 380 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAIG-YNF-----PFCLR 432
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA--GNRIWDLRRCKRD 164
P V + D V G + + G + R P G R D R
Sbjct: 433 IPIFPVSTPSSEDPVAGDIKGCDCNLEGVLPEICDAHGRCLCRPGVEGPRC-DTCRSGFY 491
Query: 165 TYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
++P+ GS + C+S G+C+C+PGVTG +CDRC YDF S C+P
Sbjct: 492 SFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSACDP 551
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AG++ G C+CK +VEG C
Sbjct: 552 AGTINWN------LGYCQCKLHVEGPTC 573
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 112/238 (47%), Gaps = 44/238 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 470 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 525
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ N + QC ++H E
Sbjct: 526 GQRCDRCLSGAYDFPHCQGSSSACDPAGTI----NWNLGYCQC---------KLHVEGPT 572
Query: 143 QSRKNFDPAGNRIWDLR----------RCKRDTYPLGHGGSLNLQC-NSEGRCQCKPGVT 191
SR W+L +C + G G +C +G C CK V
Sbjct: 573 CSRCKL-----LYWNLDKENPSGCSECKCHKGGTVSGTG-----ECRQGDGDCHCKSHVG 622
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 623 GDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSM--CSGPSGVCQCREHVVGKVCQ 678
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 88/192 (45%), Gaps = 22/192 (11%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
C+CN G L C++ GRC C+PGV G +CD C Y F C++C C+ GS +
Sbjct: 454 CDCNLEGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP- 510
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
C SV GQCE + R D + +D C+ + G++N
Sbjct: 511 -CSSVTGQCECRPGVTGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTINW 557
Query: 177 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQ 233
G CQCK V G C RC + +++ + +GC C+C+ G+V T C G
Sbjct: 558 NL---GYCQCKLHVEGPTCSRCKLLYWNLDKENPSGCSECKCHKGGTVSGTGECRQGDGD 614
Query: 234 CECKDNVEGAQC 245
C CK +V G C
Sbjct: 615 CHCKSHVGGDSC 626
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 67/174 (38%), Gaps = 63/174 (36%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C+C P +C+ C+ + + AGC+ C C S +G E+A
Sbjct: 1289 GQCRCPPRTVRPQCEVCETHSFSLHPMAGCEGCNC-------------SRRGTIEAA--- 1332
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT 191
+ RC RD+ G+C CKP +T
Sbjct: 1333 --------------------------MPRCDRDS----------------GQCGCKPRIT 1350
Query: 192 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +CDRC Y F E C C CN G+ CD G C CK+NVEG +C
Sbjct: 1351 GRQCDRCASGFYGFPE--CVPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1400
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 101/263 (38%), Gaps = 62/263 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQK-------SGDNFCTACNCN--------------PIGSLN 66
+CQ G C++C Y Q+ + C ACNC+ SLN
Sbjct: 284 ECQHHTCGETCDRCCTGYNQRRLGPAAWEQSHECEACNCHGHASNCYYDPDVERHEASLN 343
Query: 67 LQCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPN 117
Q G C+ G C++C +Y +G GC C C+P ++
Sbjct: 344 TQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDP----EHADG 399
Query: 118 CDSVKGQCE---------------SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
C+ G+C R+ V + + DP D++ C
Sbjct: 400 CEQGSGRCHCKPNFHGDNCEKCAIGYNFPFCLRIPI-FPVSTPSSEDPVAG---DIKGCD 455
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ G L C++ GRC C+PGV G +CD C Y F C++C C+ GS +
Sbjct: 456 CNL-----EGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQ 508
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
C SV GQCEC+ V G +C
Sbjct: 509 MP--CSSVTGQCECRPGVTGQRC 529
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 23/153 (15%)
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR- 154
F G CEC+P G+ P+C G ++ SS G PA +
Sbjct: 1222 FYHKGALPCECHPTGT---GPHCSPEGGSAHASPTSSGGSA-------------PAVQQA 1265
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSC 213
+ RCK G L G+C+C P +C+ C+ + + AGC+ C
Sbjct: 1266 TYGFPRCKPKPCSCGR----RLCEEMTGQCRCPPRTVRPQCEVCETHSFSLHPMAGCEGC 1321
Query: 214 ECNPAGSVK-NTPNCDSVKGQCECKDNVEGAQC 245
C+ G+++ P CD GQC CK + G QC
Sbjct: 1322 NCSRRGTIEAAMPRCDRDSGQCGCKPRITGRQC 1354
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ G++ G+C CKP +TG +CDRC
Sbjct: 1300 PQCEVCETHSFSLHPMAGCEGCNCSRRGTIEAAMPRCDRDSGQCGCKPRITGRQCDRCAS 1359
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1360 GFYGFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1389
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 617 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKV 676
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 677 CQRPENNYY 685
>gi|327284536|ref|XP_003226993.1| PREDICTED: laminin subunit alpha-1-like [Anolis carolinensis]
Length = 3065
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 107/234 (45%), Gaps = 44/234 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ + G C+KC YY S C CNC+ GS+ CN EGRC+C PGV G+KCDR
Sbjct: 915 CKMNVVGQRCDKCLFGYYGISTGLGCLPCNCSKAGSVAEDCNDEGRCRCVPGVAGEKCDR 974
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV--QSRK 146
C Y F + GC C+C CD G+C HTE K
Sbjct: 975 CAHGFYAFQDGGCTPCDC-----AHTLDACDEDSGECICPP-------HTEGEKCEFCAK 1022
Query: 147 NFDPAGNRIWDL---RRCK----RDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
NF W L + CK D GS++LQC+ RCQCK G GD CD C
Sbjct: 1023 NF-------WGLDPEKGCKACNCSDL------GSVSLQCDQVTARCQCKHGYGGDNCDVC 1069
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
+ + D+ + C C+C+ GS +T + C+ G C CK+NV G C
Sbjct: 1070 ALGYRDYPD--CVPCDCDIRGSKADTCDQNQGICSCEEETGICACKENVFGLHC 1121
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 104/236 (44%), Gaps = 39/236 (16%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNLQCNSE-GRCQCKP 79
H G CL C G+ G +CE+C + YY + N C AC CN S++ C+ E G CQCK
Sbjct: 858 HTGECLKCTGNTVGRHCERCANGYYGDAVINKDCRACECNMDSSVSSICHHETGLCQCKM 917
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G +CD+C +Y GC C C+ AGSV +C+ +G+C
Sbjct: 918 NVVGQRCDKCLFGYYGISTGLGCLPCNCSKAGSVAE--DCND-EGRCRCVP--------- 965
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG--------SLNLQCNSEGRCQCKPGV 190
AG + RC Y GG +L+ G C C P
Sbjct: 966 ----------GVAGEKC---DRCAHGFYAFQDGGCTPCDCAHTLDACDEDSGECICPPHT 1012
Query: 191 TGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+KC+ C N + E GCK+C C+ GSV + CD V +C+CK G C
Sbjct: 1013 EGEKCEFCAKNFWGLDPEKGCKACNCSDLGSV--SLQCDQVTARCQCKHGYGGDNC 1066
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ +Y GG C++C G NCE C D YY+
Sbjct: 319 CNCHNKAEDCYYDQSVADQNRSINIYGEFKGGGVCVNCTQHTTGINCEICTDGYYRPHKV 378
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
+N C C C+ GS C + G+C CK G TG KCDRC +
Sbjct: 379 SPYDNNPCLPCECDLFGSFGSDCVKDDEHAKKQHGVQPGQCHCKEGYTGAKCDRCAFGYK 438
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
G C C C+ GS+ + P
Sbjct: 439 --GYPNCLHCNCSLVGSINDDP 458
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C+CNG + C G CL C+ + G +C++C +Y
Sbjct: 734 CDCNGHATECDIH----------GVCLACEHNTSGRSCDQCLPGFYGTPTKGTAEDCQLC 783
Query: 47 ----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEA 99
+ +NF C+ + IG ++ C+ QC PG G KC+RC Y
Sbjct: 784 ACPLRTPSNNFSPTCHLDSIG--DVICD-----QCPPGYAGPKCERCANGFYGDPLVPGQ 836
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
C C+CN C S G+C ++ GR H E R + D N+ D R
Sbjct: 837 SCVPCDCNGNIDPMEDGYCHSHTGECLKCTGNTVGR-HCE-RCANGYYGDAVINK--DCR 892
Query: 160 RCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNP 217
C+ + S++ C+ E G CQCK V G +CD+C +Y GC C C+
Sbjct: 893 ACECNM-----DSSVSSICHHETGLCQCKMNVVGQRCDKCLFGYYGISTGLGCLPCNCSK 947
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AGSV +C+ +G+C C V G +C
Sbjct: 948 AGSVAE--DCND-EGRCRCVPGVAGEKC 972
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 76/197 (38%), Gaps = 59/197 (29%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C +G CE C N++ + C ACNC+ +GS++LQC+ RCQCK G
Sbjct: 1004 GECI-CPPHTEGEKCEFCAKNFWGLDPEKGCKACNCSDLGSVSLQCDQVTARCQCKHGYG 1062
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
GD CD C + + D+ + C C+C+ GS +T CD +G C
Sbjct: 1063 GDNCDVCALGYRDYPD--CVPCDCDIRGSKADT--CDQNQGICS---------------- 1102
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C+ +T G C CK V G C C
Sbjct: 1103 ------------------CEEET----------------GICACKENVFGLHCSECKTGT 1128
Query: 203 YDF---GEAGCKSCECN 216
+ GC C C+
Sbjct: 1129 FALHAINPLGCIPCFCS 1145
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
HC C +G CE+C Y+ K+ C C CNP GS++ C+ G+C CK GV
Sbjct: 1462 HCNACITGYEGQYCERCSPTYFGDPKAPGGSCQQCQCNPNGSVHNTCDHISGQCVCKQGV 1521
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
TG CD C+ H + C SC+ + GS+ N
Sbjct: 1522 TGWLCDECEPRHI-LVDNECISCDDDCTGSLLN 1553
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C G G C+RC ++ +A C+ C+CNP GSV NT CD + GQC CK V G
Sbjct: 1466 CITGYEGQYCERCSPTYFGDPKAPGGSCQQCQCNPNGSVHNT--CDHISGQCVCKQGVTG 1523
Query: 243 AQC 245
C
Sbjct: 1524 WLC 1526
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG KCDRC + G C C C+ GS+ + P + C CK+NVE
Sbjct: 417 GQCHCKEGYTGAKCDRCAFGYK--GYPNCLHCNCSLVGSINDDPCVEP----CLCKENVE 470
Query: 242 GAQC 245
G C
Sbjct: 471 GENC 474
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 6 FSNRCFFDKELYNRTGHG---GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPI 62
F + C D E + + HG G C C+ G C++C Y G C CNC+ +
Sbjct: 397 FGSDCVKDDE-HAKKQHGVQPGQC-HCKEGYTGAKCDRCAFGY---KGYPNCLHCNCSLV 451
Query: 63 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSV-KNTP-- 116
GS+N E C CK V G+ CDRC +Y+ E GC C C V ++ P
Sbjct: 452 GSINDDPCVE-PCLCKENVEGENCDRCKPGYYNLQERNPQGCTECFCFGVSDVCESLPWP 510
Query: 117 --NCDSVKGQCESAQLSSR 133
S+ G +A +S+
Sbjct: 511 ISQISSMAGWMVTAPYTSK 529
>gi|395816436|ref|XP_003781708.1| PREDICTED: laminin subunit alpha-2 isoform 2 [Otolemur garnettii]
Length = 3115
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 115/269 (42%), Gaps = 67/269 (24%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS+ C + RTG C+ + G C++C+ + C CNC
Sbjct: 917 CNPNGSFSDIC------HPRTGQ----CQCRANVRGQRCDECKPGTFGLQSARGCAPCNC 966
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C+ G+C C+PGV G KCD C +++F E GC +CEC+ G+ NCD
Sbjct: 967 NSFGSKSFDCDESGQCWCQPGVAGKKCDHCAHGYFNFQEGGCTACECSHLGN-----NCD 1021
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
G+C P +C +T+ GH
Sbjct: 1022 PKTGRC----------------------ICPPNTVGEKCSKCAPNTW--GHSIITGCKAC 1057
Query: 172 -----GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN G+C C P +G KC C+ H++F C C+C G+ +
Sbjct: 1058 NCSTVGSLDFQCNVHTGQCNCHPKFSGTKCAECNRGHWNFPH--CNLCDCFLPGT--DAA 1113
Query: 226 NCDS---------VKGQCECKDNVEGAQC 245
CDS GQC CK NVEG C
Sbjct: 1114 TCDSETKQCSCRDQTGQCTCKVNVEGVHC 1142
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 813 NNFSPTCHLDRSL------GLICDECPVGHTGPRCERCAEGYFGQPSVPGGSCQPCQCND 866
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CNP
Sbjct: 867 ----NLDFSIPGSCDSLSGACLICKPGTTGQYCELCADGY--FGDAVDAKNCQPCRCNPN 920
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS + C GQC Q R N G R CK T+ L
Sbjct: 921 GSFSDI--CHPRTGQC-----------------QCRANV--RGQRC---DECKPGTFGLQ 956
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C+ G+C C+PGV G KCD C +++F E GC +CEC+
Sbjct: 957 SARGCAPCNCNSFGSKSFDCDESGQCWCQPGVAGKKCDHCAHGYFNFQEGGCTACECSHL 1016
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1017 GN-----NCDPKTGRCICPPNTVGEKC 1038
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIHGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C C+ IGS+N C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCRCDLIGSINEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGY--M 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK C C+ +GS P
Sbjct: 462 GYPACKPCNCSGSGSTNEDP 481
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 83/225 (36%), Gaps = 64/225 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN G+C C P +
Sbjct: 1025 GRCI-CPPNTVGEKCSKCAPNTWGHSIITGCKACNCSTVGSLDFQCNVHTGQCNCHPKFS 1083
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C+ H++F C C+C G+ + CDS QC
Sbjct: 1084 GTKCAECNRGHWNFPH--CNLCDCFLPGT--DAATCDSETKQCS---------------- 1123
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C+ T G+C CK V G CDRC
Sbjct: 1124 ------------------CRDQT----------------GQCTCKVNVEGVHCDRCRPGK 1149
Query: 203 YDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+ GC SC C A T C +G + + ++ Q
Sbjct: 1150 FGLDARNPLGCSSCYCFGA-----TTQCSEAEGLIQARVTLKADQ 1189
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 103/254 (40%), Gaps = 60/254 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G CL+C+ GP C KC +Y +NF C+ + SL
Sbjct: 768 GECLNCKDHTGGPYCNKCLPGFYGDPTKGTSEDCQPCACPLNIPSNNFSPTCHLD--RSL 825
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDS 120
L C+ +C G TG +C+RC + FG+ C+ C+CN +CDS
Sbjct: 826 GLICD-----ECPVGHTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIPGSCDS 878
Query: 121 VKGQCESAQLSSRGRVHTEL-------RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
+ G C + + G+ + EL KN P RC + GS
Sbjct: 879 LSGACLICKPGTTGQ-YCELCADGYFGDAVDAKNCQPC--------RCNPN-------GS 922
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVK 231
+ C+ G+CQC+ V G +CD C + A GC C CN GS + +CD
Sbjct: 923 FSDICHPRTGQCQCRANVRGQRCDECKPGTFGLQSARGCAPCNCNSFGS--KSFDCDE-S 979
Query: 232 GQCECKDNVEGAQC 245
GQC C+ V G +C
Sbjct: 980 GQCWCQPGVAGKKC 993
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1491 CTACPRGFEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDPVTGLCTCRPGAT 1550
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1551 GKKCDGCKHWH 1561
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK C C+ +GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGY--MGYPACKPCNCSGSGST----NEDPCFGPCNCKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C C+G S+ C D E C +CQ G CE+C YY K N C C
Sbjct: 1417 CQCHGHSSLC--DPET-------SVCQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1467
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1468 CPLISSSNNFSPSCLPEGVDDYRCTACPRGFEGQYCERCAPGYTGSPSSPGGSCQECECD 1527
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1528 PYGSLPVP--CDPVTGLC 1543
>gi|440891371|gb|ELR45100.1| Laminin subunit beta-1, partial [Bos grunniens mutus]
Length = 1799
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ +
Sbjct: 348 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPSL 407
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 408 CEQCTCDPAGSQNGGICDSYTDFSAGLIAGQCRCKLYVEGEHCDICKEGFYDLSAEDPFG 467
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 468 CKSCACNPLGTIPGGNPCDSETGYCYCK------------RLVTGQHCDQCLVEHWGLSN 515
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C + +Y
Sbjct: 516 DLDGCRPCDCDI-----GGALNNSCSAESGQCLCRPHMIGRQCSEVESGYY 561
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G +CDRC
Sbjct: 763 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRRCDRCAPG 822
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCKSCEC+ GSV CD + GQC
Sbjct: 823 TFGFGPSGCKSCECHLQGSVNAF--CDPITGQC 853
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 108/278 (38%), Gaps = 63/278 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL CQ G NCE+C YY
Sbjct: 880 CQCNGHADDC---------DSVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPC 930
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFG 97
+SG F ++C +P+ SL L C C PG G +CD C + D G
Sbjct: 931 PCPDGPESGRQFASSCYQDPV-SLQLA------CVCNPGYIGSRCDECASGFFGNPSDVG 983
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-W 156
C+ C+C+ + CD G+C + G H +L +F G+ +
Sbjct: 984 -GTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTEGE-HCQL-----CHFGYYGDALRQ 1036
Query: 157 DLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE- 207
D R+C + G++ CN + G+C C P V G CDRC N +
Sbjct: 1037 DCRKCV-----CNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASG 1091
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C C+ A S P+C+ GQC C G C
Sbjct: 1092 TGCDPCSCDAAHSFG--PSCNEFTGQCHCMPGFGGRTC 1127
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 116/264 (43%), Gaps = 61/264 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE+C D Y+ + N C CNCN S L
Sbjct: 309 GHCM-CRHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLAT 367
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGE------AGCKSCECNPAGSVKNTPNCDS 120
S G C C+ G C++C +Y E + C+ C C+PAGS +N CDS
Sbjct: 368 GNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPSLCEQCTCDPAGS-QNGGICDS 426
Query: 121 --------VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY------ 166
+ GQC R +++ E ++ D +DL D +
Sbjct: 427 YTDFSAGLIAGQC-------RCKLYVE-----GEHCDICKEGFYDLS--AEDPFGCKSCA 472
Query: 167 --PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSV 221
PLG N C+SE G C CK VTG CD+C V H+ GC+ C+C+ G++
Sbjct: 473 CNPLGTIPGGN-PCDSETGYCYCKRLVTGQHCDQCLVEHWGLSNDLDGCRPCDCDIGGAL 531
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
N+ C + GQC C+ ++ G QC
Sbjct: 532 NNS--CSAESGQCLCRPHMIGRQC 553
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 80/185 (43%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G +C+ C YY + C C CN +G++ CN + G+C
Sbjct: 1008 GRCLKCLYHTEGEHCQLCHFGYYGDALRQDCRKCVCNYLGTVQEHCNGSDCQCDKTTGQC 1067
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N + GC C C+ A S P+C+ GQC G
Sbjct: 1068 LCLPNVIGQNCDRCAPNTWQLASGTGCDPCSCDAAHSFG--PSCNEFTGQCHCMP-GFGG 1124
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E Q DP+ + R C D G QC+ S G+C C GV G
Sbjct: 1125 RTCSE--CQELFWGDPS----VECRACDCDPR-----GIETPQCDHSTGQCVCVEGVEGP 1173
Query: 194 KCDRC 198
+CD+C
Sbjct: 1174 RCDKC 1178
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 101/238 (42%), Gaps = 30/238 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C +C C+ GS+N C+ G+C C GV
Sbjct: 802 GGQC-QCRPNVVGRRCDRCAPGTF-GFGPSGCKSCECHLQGSVNAFCDPITGQCHCFQGV 859
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC + F C+ C+CN + +CDSV G+C S Q + G H R
Sbjct: 860 YMRQCDRCLPGFWGF--PSCQPCQCN-----GHADDCDSVTGECLSCQDYTTG--HNCER 910
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + ++LQ C C PG G
Sbjct: 911 CLAGYYGDPIIGSGDHCRPCPCPDGPESGRQFASSCYQDPVSLQL----ACVCNPGYIGS 966
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + D G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 967 RCDECASGFFGNPSDVG-GTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTEGEHCQ 1023
>gi|157817871|ref|NP_001101410.1| multiple epidermal growth factor-like domains protein 9 precursor
[Rattus norvegicus]
gi|149059562|gb|EDM10500.1| EGF-like-domain, multiple 5 (predicted) [Rattus norvegicus]
Length = 599
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 22/226 (9%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC G +C+ C++ +Y C C+C+P G++++ CNS G CQCK GVTG CD
Sbjct: 222 DCHVGYQGLHCDTCKEGFYLNHTVGLCLPCHCSPRGAVSILCNSSGNCQCKLGVTGSMCD 281
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C HY FG+ GC C+CN + +CD + G C + Q +++G H E + ++
Sbjct: 282 QCQDGHYGFGKTGCLPCQCN-----NRSDSCDVLTGACLNCQENTKGE-HCE---ECKEG 332
Query: 148 FDPAGNRIWDLRRCK-RDTYPLG----HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
F + + + RC G G+L C+ QCK G TG C+ C+ N
Sbjct: 333 FYQSPDAARECLRCPCSAVTSTGNCTIEFGALEPTCD-----QCKDGYTGQNCNTCE-NG 386
Query: 203 YDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
Y ++ C CEC+ TP C G+C C N G C
Sbjct: 387 YYHSDSICLQCECHGHVDPIKTPKICKPESGECINCLHNTTGLWCE 432
>gi|397520458|ref|XP_003830334.1| PREDICTED: laminin subunit alpha-3 isoform 1 [Pan paniscus]
Length = 3333
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 125/278 (44%), Gaps = 56/278 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 356 CNCHGHASDCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C + +Y+F C
Sbjct: 416 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAIGYYNF-----PFCLR 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW---------- 156
P V + D V G + + G V E+ D G W
Sbjct: 470 IPIFPVSTPSSEDPVAGDIKGCDCNLEG-VLPEI-------CDAHG---WCLCRPGVEGP 518
Query: 157 --DLRRCKRDTYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE 207
D R ++P+ GS + C+S G+C+C+PGVTG +CDRC YDF
Sbjct: 519 RCDTCRSGFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGVYDFPH 578
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
S C+PAG++ +S G C+CK +VEG C
Sbjct: 579 CQGSSSACDPAGTI------NSNLGYCQCKLHVEGPTC 610
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 44/238 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 507 GWCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ +S G C+ ++H E
Sbjct: 563 GQRCDRCLSGVYDFPHCQGSSSACDPAGTI------NSNLGYCQC-------KLHVEGPT 609
Query: 143 QSRKNFDPAGNRIWDLR----------RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
SR W+L +C + G G +C +G C CK V
Sbjct: 610 CSRCKL-----LYWNLDKENPSGCSECKCHKAGTVSGTG-----ECRQGDGDCHCKSHVG 659
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 660 GDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSM--CSGPSGVCQCREHVVGKVCQ 715
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 90/223 (40%), Gaps = 51/223 (22%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ EG +C C+P V G +C C HY
Sbjct: 1250 NSARSLVAFYHKGA----LPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTHCATGHYG 1305
Query: 96 FGEAGCKSCECN--PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-- 151
F CK C C P C+ + GQC + R + E+ +F P
Sbjct: 1306 FPR--CKPCSCGRCP---------CEEMTGQCRCPPRTVRPQC--EVCETHSFSFHPMAG 1352
Query: 152 ---------GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G + C RD+ G+C+CKP +TG +CDRC
Sbjct: 1353 CEGCNCSRRGTIEAAMPECDRDS----------------GQCRCKPRITGRQCDRCASGF 1396
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F E C C CN G+ CD G C CK+NVEG +C
Sbjct: 1397 YRFPE--CVPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1435
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE C++ YY + C AC C
Sbjct: 1687 CNCNGHSNRC---------QDGSGICVNCQHNTAGEHCEHCQEGYYGNAVHGSCRACPCP 1737
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1738 HTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 1796
Query: 114 NTPNCDSVKGQC 125
+C + G C
Sbjct: 1797 ---SCHPLTGDC 1805
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ G++ G+C+CKP +TG +CDRC
Sbjct: 1335 PQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCAS 1394
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1395 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1424
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 102/264 (38%), Gaps = 63/264 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN--------------PIGSLN 66
+CQ G C++C Y Q+ + C ACNC+ SLN
Sbjct: 320 ECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASDCYYDPDVERQQASLN 379
Query: 67 LQCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPN 117
Q G C+ G C++C +Y +G GC C C+P ++
Sbjct: 380 TQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDP----EHADG 435
Query: 118 CDSVKGQ-----------CESAQLSSRG-----RVHTELRVQSRKNFDPAGNRIWDLRRC 161
C+ G+ CE + R+ V + + DP D++ C
Sbjct: 436 CEQGSGRCHCKPNFHGDNCEKCAIGYYNFPFCLRIPI-FPVSTPSSEDPVAG---DIKGC 491
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+ G L C++ G C C+PGV G +CD C Y F C++C C+ GS
Sbjct: 492 DCNL-----EGVLPEICDAHGWCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSY 544
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ C SV GQCEC+ V G +C
Sbjct: 545 QMP--CSSVTGQCECRPGVTGQRC 566
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 654 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKV 713
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 714 CQRPENNYY 722
>gi|281337720|gb|EFB13304.1| hypothetical protein PANDA_004051 [Ailuropoda melanoleuca]
Length = 545
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C G C+ CR+ +Y C C+C+P G+L+ C S G+CQCK GVTG CD
Sbjct: 168 ECWPPYQGLRCDTCREGFYLNHTIGLCMPCDCSPHGALSSHCGSSGKCQCKVGVTGSTCD 227
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +YDF ++GC C CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 228 RCQDGYYDFSKSGCLPCRCN-----NRSASCDALTGACLNCQENSKGD-HCE---ECKEG 278
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFG 206
F + + RC G + E C QCK G TG C+ C+ +Y+
Sbjct: 279 FYQSPGATKECLRCPCSAV-TSTGSCVRKLGELEPSCVQCKEGYTGKNCNTCENGYYN-S 336
Query: 207 EAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
++ C C+C+ TP C G+C C N G C
Sbjct: 337 DSICTKCQCHSHVDSTTTPKICKPESGECIHCLHNTTGFWCE 378
>gi|402902824|ref|XP_003914292.1| PREDICTED: laminin subunit alpha-3 [Papio anubis]
Length = 3344
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 110/259 (42%), Gaps = 62/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 356 CNCHGHASDCYYDSDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C +Y+F C
Sbjct: 416 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAAGYYNF-----PFCLK 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P V D V G D+R C +
Sbjct: 470 IPIFPVSTPSPEDPVAG---------------------------------DVRGCDCNL- 495
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G L C++ GRC C+PGV G +CD C Y F C++C C+ GS +
Sbjct: 496 ----EGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP-- 547
Query: 227 CDSVKGQCECKDNVEGAQC 245
C SV GQCEC+ V G +C
Sbjct: 548 CSSVTGQCECRPGVTGQRC 566
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ + C+ EG +C C+P V G +C RC HY
Sbjct: 1261 NSARSLVAFYHKGA----LPCECHPAGATSPHCSPEGGQCPCRPNVIGRQCTRCATGHYG 1316
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG--- 152
F CK C C C+ + GQC + R + E+ +F P
Sbjct: 1317 FPH--CKPCSCG-------LRLCEEMTGQCRCPPRTVRPQC--EVCETHSFSFHPMAGCE 1365
Query: 153 --NRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG 209
N C R G + L+C+ + G+C+CKP +TG +CDRC Y F E
Sbjct: 1366 GCN-------CSRR----GTSEAAMLECDRDSGQCRCKPRITGRQCDRCASGFYRFPE-- 1412
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C CN G+ CD G C CK+NVEG +C
Sbjct: 1413 CVPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1446
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 507 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
G +CDRC YDF S C+PAG++
Sbjct: 563 GQRCDRCLSGAYDFPHCQGSSSACDPAGTI 592
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1698 CNCNGHSNRC---------QDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCP 1748
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1749 HTNRFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNNNGQLG 1807
Query: 114 NTPNCDSVKGQC 125
+CD + G C
Sbjct: 1808 ---SCDPLTGDC 1816
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGS---LNLQCNSE-GRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ G+ L+C+ + G+C+CKP +TG +CDRC
Sbjct: 1346 PQCEVCETHSFSFHPMAGCEGCNCSRRGTSEAAMLECDRDSGQCRCKPRITGRQCDRCAS 1405
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1406 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1435
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+G C CK V GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+
Sbjct: 660 DGDCHCKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSV--CSGPSGVCQCR 717
Query: 238 DNVEGAQCR 246
++V G C+
Sbjct: 718 EHVVGKACQ 726
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 665 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSVCSGPSGVCQCREHVVGKA 724
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 725 CQRPENNYY 733
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 36 PNCEKCRDNYYQ--KSGDNFCTACNCNPIGSLNL--QCNS-EGRCQCKPGVTGDKCDRCD 90
P C C+ Y+ K N C+ C C+ G+++ +C +G C CK V GD CD C+
Sbjct: 619 PTCSICKPLYWNLDKENPNGCSECQCHKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCE 678
Query: 91 VNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
++ ++ GC+ C+C+ G++ + C G C+
Sbjct: 679 DGYFALEKSNYFGCQGCQCDIGGALSSV--CSGPSGVCQ 715
>gi|327272690|ref|XP_003221117.1| PREDICTED: netrin-4-like [Anolis carolinensis]
Length = 629
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG S+ C FD + + +G+ GG C +CQ + +G +C++C+ YY+ S +
Sbjct: 357 CKCNGHSDTCHFDMDTWLASGNQSGGVCDNCQHNTEGQHCQRCKPGYYRDLRRPFSAPDA 416
Query: 54 CTACNCNPIGSLNLQCN-------SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+PIGS L + S G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 417 CKLCSCHPIGSAVLPFSNSTFCDPSNGDCPCKPGVAGPQCDRCMVGYWGFGDYGCQPCDC 476
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CDS+ G C S+
Sbjct: 477 --AGS------CDSLNGDCISS 490
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CDS+ G C
Sbjct: 441 SNGDCPCKPGVAGPQCDRCMVGYWGFGDYGCQPCDC--AGS------CDSLNGDC 487
>gi|148672869|gb|EDL04816.1| laminin, alpha 2, isoform CRA_b [Mus musculus]
Length = 3112
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 121/254 (47%), Gaps = 37/254 (14%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C + RTG +C+ + G +C++C+ + C CNC
Sbjct: 916 CNINGSFSEIC------HTRTGQ----CECRPNVQGRHCDECKPETFGLQLGRGCLPCNC 965
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+ G+ NCD
Sbjct: 966 NSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHLGN-----NCD 1020
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GQC ++ G +E + + G ++ C T GSL QCN
Sbjct: 1021 PKTGQCICPP-NTTGEKCSECLPNTWGHSIVTGCKV-----CNCSTV-----GSLASQCN 1069
Query: 180 -SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK------- 231
+ G+C C P +G KC C H+++ C C+C G+ T + ++ K
Sbjct: 1070 VNTGQCSCHPKFSGMKCSECSRGHWNY--PLCTLCDCFLPGTDATTCDLETRKCSCSDQT 1127
Query: 232 GQCECKDNVEGAQC 245
GQC CK NVEG C
Sbjct: 1128 GQCSCKVNVEGVHC 1141
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 111/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 812 NNFSPTCHLDRSL------GLICDECPIGYTGPRCERCAEGYFGQPSIPGGSCQPCQCND 865
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 866 ----NLDYSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVNAKNCQPCRCNIN 919
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C + GQCE VQ R CK +T+ L
Sbjct: 920 GSFSEI--CHTRTGQCECRP-----------NVQGRH-----------CDECKPETFGLQ 955
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+
Sbjct: 956 LGRGCLPCNCNSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHL 1015
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD GQC C N G +C
Sbjct: 1016 GN-----NCDPKTGQCICPPNTTGEKC 1037
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 97/238 (40%), Gaps = 59/238 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F D E G C CQ G C++C Y+ Q+ G C AC+
Sbjct: 963 CNCNSFGSKSF-DCE------ASGQCW-CQPGVAGKKCDRCAHGYFNFQEGG---CIACD 1011
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 116
C+ +G+ C+ + G+C C P TG+KC C N + GCK C C+ GS+ +
Sbjct: 1012 CSHLGN---NCDPKTGQCICPPNTTGEKCSECLPNTWGHSIVTGCKVCNCSTVGSLAS-- 1066
Query: 117 NCDSVKGQCE-SAQLS-------SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
C+ GQC + S SRG W+ C D +
Sbjct: 1067 QCNVNTGQCSCHPKFSGMKCSECSRGH--------------------WNYPLCTLCDCFL 1106
Query: 168 LGHGGSL-NLQC------NSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
G + +L+ + G+C CK V G CDRC + GC SC C
Sbjct: 1107 PGTDATTCDLETRKCSCSDQTGQCSCKVNVEGVHCDRCRPGKFGLDAKNPLGCSSCYC 1164
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1490 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDRVTGLCTCRPGAT 1549
Query: 83 GDKCDRCDVNH 93
G KCD C+ H
Sbjct: 1550 GRKCDGCEHWH 1560
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G CDRC ++ G C+ C C+ GS N D G C CK+NVE
Sbjct: 436 GSCHCKTGFGGVNCDRCVRGYH--GYPDCQPCNCSGLGST----NEDPCVGPCSCKENVE 489
Query: 242 GAQC 245
G C
Sbjct: 490 GEDC 493
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 6 FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL 65
S C D++ R G C C+ G NC++C Y+ G C CNC+ +GS
Sbjct: 418 LSEVCVKDEKYAQRGLKPGSC-HCKTGFGGVNCDRCVRGYH---GYPDCQPCNCSGLGST 473
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
N + G C CK V G+ C RC ++ E K CE
Sbjct: 474 N-EDPCVGPCSCKENVEGEDCSRCKSGFFNLQEDNQKGCE 512
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S++C D E C +CQ G CE+C YY + N C C
Sbjct: 1416 CQCNGHSSQC--DPE-------TSVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCA 1466
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C +P + + C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1467 CPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1526
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1527 PYGSLPVP--CDRVTGLC 1542
>gi|117647249|ref|NP_032507.2| laminin subunit alpha-2 precursor [Mus musculus]
gi|225000972|gb|AAI72647.1| Laminin, alpha 2 [synthetic construct]
Length = 3118
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 121/254 (47%), Gaps = 37/254 (14%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C + RTG +C+ + G +C++C+ + C CNC
Sbjct: 916 CNINGSFSEIC------HTRTGQ----CECRPNVQGRHCDECKPETFGLQLGRGCLPCNC 965
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+ G+ NCD
Sbjct: 966 NSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHLGN-----NCD 1020
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GQC ++ G +E + + G ++ C T GSL QCN
Sbjct: 1021 PKTGQCICPP-NTTGEKCSECLPNTWGHSIVTGCKV-----CNCSTV-----GSLASQCN 1069
Query: 180 -SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK------- 231
+ G+C C P +G KC C H+++ C C+C G+ T + ++ K
Sbjct: 1070 VNTGQCSCHPKFSGMKCSECSRGHWNY--PLCTLCDCFLPGTDATTCDLETRKCSCSDQT 1127
Query: 232 GQCECKDNVEGAQC 245
GQC CK NVEG C
Sbjct: 1128 GQCSCKVNVEGVHC 1141
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 111/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 812 NNFSPTCHLDRSL------GLICDECPIGYTGPRCERCAEGYFGQPSIPGGSCQPCQCND 865
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 866 ----NLDYSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVNAKNCQPCRCNIN 919
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C + GQCE VQ R CK +T+ L
Sbjct: 920 GSFSEI--CHTRTGQCECRP-----------NVQGRH-----------CDECKPETFGLQ 955
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+
Sbjct: 956 LGRGCLPCNCNSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHL 1015
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD GQC C N G +C
Sbjct: 1016 GN-----NCDPKTGQCICPPNTTGEKC 1037
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 97/238 (40%), Gaps = 59/238 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F D E G C CQ G C++C Y+ Q+ G C AC+
Sbjct: 963 CNCNSFGSKSF-DCE------ASGQCW-CQPGVAGKKCDRCAHGYFNFQEGG---CIACD 1011
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 116
C+ +G+ C+ + G+C C P TG+KC C N + GCK C C+ GS+ +
Sbjct: 1012 CSHLGN---NCDPKTGQCICPPNTTGEKCSECLPNTWGHSIVTGCKVCNCSTVGSLAS-- 1066
Query: 117 NCDSVKGQCE-SAQLS-------SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
C+ GQC + S SRG W+ C D +
Sbjct: 1067 QCNVNTGQCSCHPKFSGMKCSECSRGH--------------------WNYPLCTLCDCFL 1106
Query: 168 LGHGGSL-NLQC------NSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
G + +L+ + G+C CK V G CDRC + GC SC C
Sbjct: 1107 PGTDATTCDLETRKCSCSDQTGQCSCKVNVEGVHCDRCRPGKFGLDAKNPLGCSSCYC 1164
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1490 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDRVTGLCTCRPGAT 1549
Query: 83 GDKCDRCDVNH 93
G KCD C+ H
Sbjct: 1550 GRKCDGCEHWH 1560
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G CDRC ++ G C+ C C+ GS N D G C CK+NVE
Sbjct: 436 GSCHCKTGFGGVNCDRCVRGYH--GYPDCQPCNCSGLGST----NEDPCVGPCSCKENVE 489
Query: 242 GAQC 245
G C
Sbjct: 490 GEDC 493
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S++C D E C +CQ G CE+C YY + N C C
Sbjct: 1416 CQCNGHSSQC--DPE-------TSVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCA 1466
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C +P + + C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1467 CPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1526
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1527 PYGSLPVP--CDRVTGLC 1542
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 6 FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL 65
S C D++ R G C C+ G NC++C Y+ G C CNC+ +GS
Sbjct: 418 LSEVCVKDEKYAQRGLKPGSC-HCKTGFGGVNCDRCVRGYH---GYPDCQPCNCSGLGST 473
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
N + G C CK V G+ C RC ++ E K CE
Sbjct: 474 N-EDPCVGPCSCKENVEGEDCSRCKSGFFNLQEDNQKGCE 512
>gi|449494683|ref|XP_002193408.2| PREDICTED: laminin subunit alpha-1 [Taeniopygia guttata]
Length = 3081
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 104/236 (44%), Gaps = 48/236 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ + G C+KC + YY C CNC+ GS++ CN +G+C C PGV G+KCDR
Sbjct: 913 CKSNVIGEKCDKCLNGYYGLLTGLGCIPCNCSQFGSVSEDCNHQGQCHCVPGVAGEKCDR 972
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C Y F + GC C+C NC++ GQC
Sbjct: 973 CAHGFYAFRDGGCTPCDC-----AHTQNNCNADSGQC----------------------I 1005
Query: 149 DPAGNRIWDLRRCKRDTYPLGH-----------GGSLNLQCNS-EGRCQCKPGVTGDKCD 196
P + C+ + + L GS NLQCN G+CQCK G C
Sbjct: 1006 CPPHTQGQKCELCEENYWGLSPKLGCKACNCSGAGSANLQCNVLTGQCQCKIEFGGRDCS 1065
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
RC + + D+ + C +C+C+ +G+ T N C+ G C CK+NV G QC
Sbjct: 1066 RCALGYRDYPD--CVACDCDLSGTKAETCNDTEGVCGCEEETGVCTCKENVFGLQC 1119
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDK---------ELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++++ +++ + GG CL+C G NCE C D Y++
Sbjct: 317 CNCHNKAEDCYYNQSIADQKRSMDIHGQFIGGGVCLNCTQHTTGINCEICADGYFRPHKV 376
Query: 51 ----DNFCTACNCNPIGSLNLQC-------NSE-----GRCQCKPGVTGDKCDRCDVNHY 94
D+ C C+C+P GSL+ C +SE G+CQC+ G G+KCD C +
Sbjct: 377 SPYEDHPCYPCDCDPFGSLSSICVKDEHHSDSEHGTWPGQCQCRKGYAGEKCDHCAFGYR 436
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
G C C C+ GS+ P
Sbjct: 437 --GYPNCLRCNCSLVGSINEDP 456
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 106/268 (39%), Gaps = 64/268 (23%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC 59
N FS C +E G C C G CE+C + YY G + C C C
Sbjct: 789 ANNFSPTCQLSEE------GGIVCDKCLPGYTGSQCERCANGYYGNPLMPGQS-CAPCEC 841
Query: 60 NPIGSLNLQCNSEGRC--------QCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPA 109
N G++N Q EG C +C G C++C +Y + C++C C+
Sbjct: 842 N--GNVNPQ--EEGHCDPSTGQCLKCLGNTAGHHCEKCADGYYGDAVIDKNCRACACHVN 897
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS+ +T C G C S + V E +C Y L
Sbjct: 898 GSLSST--CQHETGVC-----SCKSNVIGE-----------------KCDKCLNGYYGLL 933
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS++ CN +G+C C PGV G+KCDRC Y F + GC C+C
Sbjct: 934 TGLGCIPCNCSQFGSVSEDCNHQGQCHCVPGVAGEKCDRCAHGFYAFRDGGCTPCDC--- 990
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQCR 246
NC++ GQC C + +G +C
Sbjct: 991 --AHTQNNCNADSGQCICPPHTQGQKCE 1016
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C G CE C +NY+ S C ACNC+ GS NLQCN G+CQCK
Sbjct: 1002 GQCI-CPPHTQGQKCELCEENYWGLSPKLGCKACNCSGAGSANLQCNVLTGQCQCKIEFG 1060
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C RC + + D+ + C +C+C+ +G+ T C+ +G C
Sbjct: 1061 GRDCSRCALGYRDYPD--CVACDCDLSGTKAET--CNDTEGVC 1099
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 111/265 (41%), Gaps = 46/265 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTA 56
C CNG + C G C CQ + GP C++C +Y Q + ++ C
Sbjct: 732 CKCNGHATECDIH----------GVCFACQHNTTGPFCDQCLPGFYGNPSQGTSED-CQP 780
Query: 57 CNCNPIGSL------NLQCNSEGRC---QCKPGVTGDKCDRCDVNHYD---FGEAGCKSC 104
C C P+ S Q + EG +C PG TG +C+RC +Y C C
Sbjct: 781 CAC-PLSSAANNFSPTCQLSEEGGIVCDKCLPGYTGSQCERCANGYYGNPLMPGQSCAPC 839
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCK 162
ECN + + +CD GQC ++ G H E G+ + D R C
Sbjct: 840 ECNGNVNPQEEGHCDPSTGQCLKCLGNTAGH-HCEKCADGYY-----GDAVIDKNCRACA 893
Query: 163 RDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGS 220
GSL+ C E G C CK V G+KCD+C +Y GC C C+ GS
Sbjct: 894 CHV-----NGSLSSTCQHETGVCSCKSNVIGEKCDKCLNGYYGLLTGLGCIPCNCSQFGS 948
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
V + +C+ +GQC C V G +C
Sbjct: 949 V--SEDCNH-QGQCHCVPGVAGEKC 970
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HC C +G CE+C YY Q +G + C C C+P GS++ C+ + G+C CKPG
Sbjct: 1465 HCDACFPGYEGQYCERCSPGYYGNPQLAGGS-CRLCQCDPGGSIHGDCDGATGQCLCKPG 1523
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
VTG C C+ H + C SC+ N G + N+ D + S L+ RV
Sbjct: 1524 VTGQLCQECEPRHLLLQDQ-CVSCDDNCTGVLLNS--LDDLNEAILSVNLTGIDRV 1576
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 58/138 (42%), Gaps = 25/138 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C CN S C D G CL+C+ + G C C YY K + C+ C
Sbjct: 1393 CQCNNHSETCDPDT---------GKCLNCRDNTVGDYCSACAPGYYGKVTGSASDCSPCA 1443
Query: 59 C---NPIGSLNLQCNSEGRC-----QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
C NP+ S + C +G C PG G C+RC +Y C+ C+C+
Sbjct: 1444 CPRANPV-SFSPTCVLKGVQDYHCDACFPGYEGQYCERCSPGYYGNPQLAGGSCRLCQCD 1502
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ +CD GQC
Sbjct: 1503 PGGSIHG--DCDGATGQC 1518
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 186 CKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C PG G C+RC +Y C+ C+C+P GS+ +CD GQC CK V G
Sbjct: 1469 CFPGYEGQYCERCSPGYYGNPQLAGGSCRLCQCDPGGSIHG--DCDGATGQCLCKPGVTG 1526
Query: 243 AQCR 246
C+
Sbjct: 1527 QLCQ 1530
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQC+ G G+KCD C + G C C C+ GS+ P + C CK+NVE
Sbjct: 415 GQCQCRKGYAGEKCDHCAFGYR--GYPNCLRCNCSLVGSINEDPCMEP----CLCKENVE 468
Query: 242 GAQC 245
G C
Sbjct: 469 GENC 472
>gi|426235157|ref|XP_004011557.1| PREDICTED: laminin subunit alpha-2 [Ovis aries]
Length = 3086
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 116/267 (43%), Gaps = 63/267 (23%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C G C +C+ + G C++C+ + C CNC
Sbjct: 884 CNANGSFSEVCH---------PQTGQC-ECKPNVQGRRCDECKPETFGLQSARGCIPCNC 933
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+ NCD
Sbjct: 934 NSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCD 988
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------- 171
G+C P +C ++ GH
Sbjct: 989 PKTGRC----------------------ICPPNTIGEKCSKCAPRSW--GHSITTGCKAC 1024
Query: 172 -----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ QCN + G+C+C P +G KC C H+++ C C+C G+ +T
Sbjct: 1025 NCSSVGSLDFQCNLNTGQCKCHPKFSGAKCTECTRGHWNYPH--CSPCDCFLPGTDDSTC 1082
Query: 226 NCDSVK-------GQCECKDNVEGAQC 245
+ ++ K GQC CK NVEG C
Sbjct: 1083 DLETKKCSCIDQTGQCTCKVNVEGIHC 1109
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C +C G CE+C + Y+ + C C CN
Sbjct: 780 NNFSPTCHLDQSL------GLICDECPVGYSGQRCERCAEGYFGQPAVPGGSCQPCQCND 833
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 834 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCHCNAN 887
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C GQCE VQ R+ CK +T+ L
Sbjct: 888 GSFSEV--CHPQTGQCECKP-----------NVQGRR-----------CDECKPETFGLQ 923
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+
Sbjct: 924 SARGCIPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHL 983
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 984 GN-----NCDPKTGRCICPPNTIGEKC 1005
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 308 CNCHGKAEECYYDENVARRNQSLNIHGKYIGGGVCINCTRNTAGINCETCIDGFFRPKGV 367
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+P+GSLN C + G C CKPG G CDRC +
Sbjct: 368 SPNYPRPCQPCHCDPVGSLNEVCVKDEKHARRGLAPGSCHCKPGFRGVSCDRCARGYT-- 425
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK C C+ GS P
Sbjct: 426 GYPDCKPCNCSGPGSTNEDP 445
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 80/225 (35%), Gaps = 64/225 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC + S C ACNC+ +GSL+ QCN + G+C+C P +
Sbjct: 992 GRCI-CPPNTIGEKCSKCAPRSWGHSITTGCKACNCSSVGSLDFQCNLNTGQCKCHPKFS 1050
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C H+++ C C+C G+ +T + ++ K C
Sbjct: 1051 GAKCTECTRGHWNYPH--CSPCDCFLPGTDDSTCDLETKKCSC----------------- 1091
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
+ G+C CK V G CDRC
Sbjct: 1092 -----------------------------------IDQTGQCTCKVNVEGIHCDRCRPGK 1116
Query: 203 YDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+ GC SC C A T C KG ++ Q
Sbjct: 1117 FGLEAKNPLGCSSCYCFGA-----TTQCSEAKGLIRTWVTLKAEQ 1156
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKP 79
G C C +G CE+C Y S C C C+P GSL + C+ G C C+P
Sbjct: 1455 GYRCTACPRGYEGKYCERCAPGYTGSPSSPGGSCQECECDPHGSLPVPCDPVTGICTCRP 1514
Query: 80 GVTGDKCDRCDVNH 93
G TG KCD C+ H
Sbjct: 1515 GATGRKCDGCEQGH 1528
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CKPG G CDRC + G CK C C+ GS N D G C CK+N
Sbjct: 402 APGSCHCKPGFRGVSCDRCARGYT--GYPDCKPCNCSGPGST----NEDPCFGPCNCKEN 455
Query: 240 VEGAQC 245
VE C
Sbjct: 456 VERGDC 461
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C C+G SN C D E C +CQ G CE+C YY K N C C
Sbjct: 1384 CQCHGHSNLC--DPE-------TSVCQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1434
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1435 CPLISSSNNFSPSCIMEGLDGYRCTACPRGYEGKYCERCAPGYTGSPSSPGGSCQECECD 1494
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1495 PHGSLPVP--CDPVTGIC 1510
>gi|355558766|gb|EHH15546.1| hypothetical protein EGK_01653 [Macaca mulatta]
Length = 5225
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 131/270 (48%), Gaps = 43/270 (15%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD---- 51
C CN S C+++ + + G GG C DC+ + G NCE C+D ++++ G
Sbjct: 574 CQCNSHSKSCYYNVSVDPFPFEHFRGGGGVCNDCEHNTTGRNCELCKDYFFRQVGADPSA 633
Query: 52 -NFCTACNCNPIGSLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C C+C+ +G+ N + C+ G+C CK V+G +C++C Y+ E GC C
Sbjct: 634 IDVCKPCDCDKVGARNGSILCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPC 693
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + LR R NF G + LR
Sbjct: 694 NCNTSGTVDGDITCHQNSGQCKCKANVIG-------LRCD-RCNF---GFKF--LRSIND 740
Query: 164 DTYPLG-------HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
D G GS+N CN G+C+CK G +CD C N Y CK+C+C
Sbjct: 741 D----GCEPCQCNLHGSVNKFCNPLSGQCECKKEAKGLQCDTCRENFYGLDVTNCKACDC 796
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ AGS+ T C++ GQC CK NVEG QC
Sbjct: 797 DTAGSLPGT-VCNAKTGQCICKPNVEGRQC 825
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 112/232 (48%), Gaps = 32/232 (13%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + D+ C C CN GS+N CN G+C+CK G +
Sbjct: 716 CKANVIGLRCDRCNFGFKFLRSINDDGCEPCQCNLHGSVNKFCNPLSGQCECKKEAKGLQ 775
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC------ESAQLSSRGRVHTE 139
CD C N Y CK+C+C+ AGS+ T C++ GQC E Q + H
Sbjct: 776 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQCICKPNVEGRQCNKCLERHFY 834
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKCD 196
LR N + C D G++N L C+ S G+C CK GVTG +C+
Sbjct: 835 LR----------QNNSFLCLPCNCD-----KAGTINGSLLCDKSTGQCPCKLGVTGLRCN 879
Query: 197 RCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+ + Y+ GC+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 880 QCEPHRYNLTIDNFQGCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 930
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + ++Y + ++F C CNC+ G++N L C+ S G+C CK
Sbjct: 812 GQCI-CKPNVEGRQCNKCLERHFYLRQNNSFLCLPCNCDKAGTINGSLLCDKSTGQCPCK 870
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ GC+ CEC+ G++ T CD + GQC
Sbjct: 871 LGVTGLRCNQCEPHRYNLTIDNFQGCQMCECDSLGTLPGT-ICDPISGQC---------- 919
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G GS++ CNS
Sbjct: 920 ----LCVPNRQG-----------RRCNQCQPGFYISPGSANGCLPCSCHTAGSVHHICNS 964
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C ++ F C+ C C+ +G++ T C V GQC C
Sbjct: 965 LTGQCVCQDASIAGQRCDQCKDRYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1022
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1023 KQFVTGSKC 1031
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 869 CKLGVTGLRCNQCEPHRYNLTIDNFQGCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 928
Query: 85 KCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y G A GC C C+ AGSV + C+S+ GQC S G+ + +
Sbjct: 929 RCNQCQPGFYISPGSANGCLPCSCHTAGSVHHI--CNSLTGQCVCQDASIAGQRCDQCK- 985
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 986 DRYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1037
Query: 200 VNHYD 204
+H D
Sbjct: 1038 ASHLD 1042
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++C+D Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 967 GQCVCQDASIAGQRCDQCKDRYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1024
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1025 FVTGSKCDACVPSASHLD 1042
>gi|344270859|ref|XP_003407259.1| PREDICTED: laminin subunit beta-1 [Loxodonta africana]
Length = 1786
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 105/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ N
Sbjct: 335 CNCNEHSGTCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNT 394
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C CNP GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 395 CERCTCNPAGSQNGGICDSYTDFSAGLIAGQCRCKLYVEGEHCDVCKEAFYDLTAEDPLG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CK C CNP G+V CDS G C R+ + ++ D W L
Sbjct: 455 CKPCACNPLGTVPGGNPCDSETGYCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNNCSAESGQCSCRPHMIGRQCNEMESGYY 548
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 84/231 (36%), Gaps = 72/231 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G +C+ CR YY + C C CN +G+++ CN + G+C
Sbjct: 995 GRCLRCLYHTEGEHCQLCRFGYYGDTLQQECRKCVCNNLGTVHEHCNGSDCQCDKTTGQC 1054
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N + GC C NCD+
Sbjct: 1055 LCLPNVIGQNCDRCAPNTWQLASGTGCDLC------------NCDAAH------------ 1090
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
+F P+ N G+CQC PG G
Sbjct: 1091 ------------SFGPSCNEF-------------------------TGQCQCMPGFGGRT 1113
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + C++C+C+ G TP CD GQC C + VEG +C
Sbjct: 1114 CSECQELFWGDPNVECRACDCDSRGI--ETPQCDQSTGQCICVEGVEGPRC 1162
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G CDRC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCDRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+ FG +GCK CEC+ GSV CD + GQC Q
Sbjct: 810 TFGFGPSGCKPCECHLQGSVNAF--CDPITGQCHCLQ 844
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 121/286 (42%), Gaps = 57/286 (19%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFNEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNP---------IGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN L S G C C+ G C++C +Y E
Sbjct: 328 NSNACKKCNCNEHSGTCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPER 387
Query: 100 ------GCKSCECNPAGSVKNTPNCDS--------VKGQCESAQLSSRGRVHTELR---V 142
C+ C CNPAGS +N CDS + GQC R +++ E V
Sbjct: 388 DIRDPNTCERCTCNPAGS-QNGGICDSYTDFSAGLIAGQC-------RCKLYVEGEHCDV 439
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVN 201
+D + C + PLG N C+SE G C CK VTG CD+C
Sbjct: 440 CKEAFYDLTAEDPLGCKPCACN--PLGTVPGGN-PCDSETGYCYCKRLVTGQHCDQCLPE 496
Query: 202 HYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
H+ GC+ C+C+ G++ N NC + GQC C+ ++ G QC
Sbjct: 497 HWGLSNDLDGCRPCDCDLGGALNN--NCSAESGQCSCRPHMIGRQC 540
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 99/238 (41%), Gaps = 30/238 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C C C+ GS+N C+ G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRTCDRCAPGTF-GFGPSGCKPCECHLQGSVNAFCDPITGQCHCLQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CDSV G+C S Q + G H R
Sbjct: 847 YARQCDRCLPGYWGF--PNCQPCQCN-----GHADDCDSVTGECLSCQDYTTG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFASSCYQDPVTLQL----ACVCNPGYIGS 953
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + D G C+ C+CN + CD G+C C + EG C+
Sbjct: 954 RCDDCASGFFGNPSDVG-GTCQPCQCNHNIDTTDPEACDKETGRCLRCLYHTEGEHCQ 1010
>gi|449272000|gb|EMC82131.1| Usherin [Columba livia]
Length = 5225
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 121/252 (48%), Gaps = 36/252 (14%)
Query: 12 FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLN 66
F +E Y G GG C +CQ + G NCE C+D +Y+++G + C C+C G+ N
Sbjct: 592 FPQEHYR--GSGGVCDNCQHNTTGKNCELCKDFHYRQAGADLSAIDVCKPCDCYATGTKN 649
Query: 67 --LQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDS 120
L C N G+C CK V+G +C++C Y+ ++ GC C CN +G+V C
Sbjct: 650 KSLLCDNIGGQCNCKRHVSGRQCNQCQEGFYNLQQSNPDGCSPCNCNTSGTVNGDITCHQ 709
Query: 121 VKGQ--CESAQLSSR----GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
GQ C++ + R LR + +P W C HG S+
Sbjct: 710 NSGQCKCKANVIGLRCDSCNFGFKALRYSNEDGCEPC----W----CN------SHG-SV 754
Query: 175 NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
N CN G+C CK V G C+ C N Y GCK+CECN AGS T CD+ GQ
Sbjct: 755 NQFCNPLSGQCNCKERVKGLHCNTCMDNFYGLDVTGCKACECNIAGSFSGT-VCDAKTGQ 813
Query: 234 CECKDNVEGAQC 245
C CK N+ G QC
Sbjct: 814 CACKPNIGGRQC 825
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 114/241 (47%), Gaps = 49/241 (20%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCKPGVTG 83
C+ + G C++C D Y+ Q++ C CNCN G++N L C+ S G+C CK GVTG
Sbjct: 816 CKPNIGGRQCDECLDGYHKVQENRSFVCLPCNCNKAGTVNGSLLCDKSTGQCPCKAGVTG 875
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+C +C ++ Y+ + GC+ C+C+ G+V T CD + GQC L R
Sbjct: 876 LQCSQCILHTYNLSMSNLHGCQRCDCDTLGTVAGT-VCDDISGQC--VCLPQR------- 925
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTY--PLG----------HGGSLNLQCNS-EGRCQCK 187
Q R+ CK Y P GSLN C+ G+C C+
Sbjct: 926 --QGRR-----------CNECKPGFYFSPFSVTGCLPCLCHRAGSLNQTCDKLTGQCICQ 972
Query: 188 -PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
VTG C+RC ++ F C+ C C+PAG++ T C V GQC CK V G +
Sbjct: 973 DASVTGQTCERCKELYFGFDSFTGRCQHCNCHPAGAITGT--CHLVTGQCVCKQFVTGLK 1030
Query: 245 C 245
C
Sbjct: 1031 C 1031
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 115/233 (49%), Gaps = 34/233 (14%)
Query: 29 CQGDRDGPNCEKCRDNY--YQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C+ C + + S ++ C C CN GS+N CN G+C CK V G
Sbjct: 716 CKANVIGLRCDSCNFGFKALRYSNEDGCEPCWCNSHGSVNQFCNPLSGQCNCKERVKGLH 775
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR-----VHTEL 140
C+ C N Y GCK+CECN AGS T CD+ GQC + + + GR +
Sbjct: 776 CNTCMDNFYGLDVTGCKACECNIAGSFSGT-VCDAKTGQC-ACKPNIGGRQCDECLDGYH 833
Query: 141 RVQSRKNFD--PAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKC 195
+VQ ++F P C + G++N L C+ S G+C CK GVTG +C
Sbjct: 834 KVQENRSFVCLPCN--------CNK-------AGTVNGSLLCDKSTGQCPCKAGVTGLQC 878
Query: 196 DRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C ++ Y+ + GC+ C+C+ G+V T CD + GQC C +G +C
Sbjct: 879 SQCILHTYNLSMSNLHGCQRCDCDTLGTVAGT-VCDDISGQCVCLPQRQGRRC 930
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCK-PG 80
G C+ C R G C +C+ +Y C C C+ GSLN C+ G+C C+
Sbjct: 917 GQCV-CLPQRQGRRCNECKPGFYFSPFSVTGCLPCLCHRAGSLNQTCDKLTGQCICQDAS 975
Query: 81 VTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC 125
VTG C+RC ++ F C+ C C+PAG++ T C V GQC
Sbjct: 976 VTGQTCERCKELYFGFDSFTGRCQHCNCHPAGAITGT--CHLVTGQC 1020
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 179 NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE 235
N G+C CK V+G +C++C Y+ ++ GC C CN +G+V C GQC+
Sbjct: 656 NIGGQCNCKRHVSGRQCNQCQEGFYNLQQSNPDGCSPCNCNTSGTVNGDITCHQNSGQCK 715
Query: 236 CKDNVEGAQCRS 247
CK NV G +C S
Sbjct: 716 CKANVIGLRCDS 727
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G +CD C+ E GC+ C CN GSV C+ + GQC CK+
Sbjct: 712 GQCKCKANVIGLRCDSCNFGFKALRYSNEDGCEPCWCNSHGSVNQF--CNPLSGQCNCKE 769
Query: 239 NVEGAQCRS 247
V+G C +
Sbjct: 770 RVKGLHCNT 778
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 26/209 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQC--NSEGRCQCKPGVTGD 84
C+ G C +C + Y S N C C+C+ +G++ + G+C C P G
Sbjct: 869 CKAGVTGLQCSQCILHTYNLSMSNLHGCQRCDCDTLGTVAGTVCDDISGQCVCLPQRQGR 928
Query: 85 KCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C+ C Y F GC C C+ AGS+ T CD + GQC S G+ +
Sbjct: 929 RCNECKPGFYFSPFSVTGCLPCLCHRAGSLNQT--CDKLTGQCICQDASVTGQTCERCK- 985
Query: 143 QSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDV 200
+ FD R C+ + +P G++ C+ G+C CK VTG KCD C
Sbjct: 986 ELYFGFDSFTGR------CQHCNCHP---AGAITGTCHLVTGQCVCKQFVTGLKCDNCVP 1036
Query: 201 N------HYDFGEAGCKSCECNPAGSVKN 223
N H FG + + P G V N
Sbjct: 1037 NASNLDVHNLFGCSKTPFQQPPPTGEVLN 1065
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G CE+C++ Y+ D+F C CNC+P G++ C+ G+C CK
Sbjct: 967 GQCICQDASVTGQTCERCKELYF--GFDSFTGRCQHCNCHPAGAITGTCHLVTGQCVCKQ 1024
Query: 80 GVTGDKCDRCDVN------HYDFGEAGCKSCECNPAGSVKN 114
VTG KCD C N H FG + + P G V N
Sbjct: 1025 FVTGLKCDNCVPNASNLDVHNLFGCSKTPFQQPPPTGEVLN 1065
>gi|350586008|ref|XP_003482090.1| PREDICTED: laminin subunit alpha-3-like [Sus scrofa]
Length = 1770
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 109/259 (42%), Gaps = 62/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D ++ + GG C++CQ + G NCEKC YY+ G
Sbjct: 355 CNCHGHAIDCYYDPDVERQQASLNIQGIYAGGGVCINCQHNTAGVNCEKCAKGYYRPYGV 414
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C CNP + + S GRC CK GD C+ C +Y F C
Sbjct: 415 PVHAPDGCIPCRCNPEHAEACEQGS-GRCTCKFNFRGDHCEECAAGYYHF--PFCLRIPI 471
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
PA +TP+ P G DL+ C +
Sbjct: 472 FPA----STPS--------------------------------PKGPVAGDLKGCDCNL- 494
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G L C+++GRC C+PGV G +CD C Y F C++C+C+ GS +
Sbjct: 495 ----EGVLPEICDAQGRCLCRPGVGGPRCDACRPGFYSF--PICQACQCSALGSYQIP-- 546
Query: 227 CDSVKGQCECKDNVEGAQC 245
C V GQCEC+ + G +C
Sbjct: 547 CSPVTGQCECQPGITGQRC 565
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 108/233 (46%), Gaps = 34/233 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ GP C+ CR +Y C AC C+ +GS + C+ G+C+C+PG+T
Sbjct: 506 GRCL-CRPGVGGPRCDACRPGFYSFP---ICQACQCSALGSYQIPCSPVTGQCECQPGIT 561
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC DF S C+PAG++ DS G C+ ++H E
Sbjct: 562 GQRCDRCLSGASDFPHCQGFSGACDPAGTL------DSSLGFCQC-------KLHVESPT 608
Query: 143 QSRKNFDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
S W+L + D + G + +G C CK V GD CD
Sbjct: 609 CSI-----CKPLYWNLAKENPDGCSECRCHVAGTVSGIGECGQLDGDCHCKSHVGGDSCD 663
Query: 197 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C+ ++ ++ GC+ C+C+ G+V TP C G C+C+++V G C+
Sbjct: 664 TCEDGYFALEKSNYFGCQGCQCDIGGAV--TPMCSGPSGVCQCREHVVGKVCQ 714
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 92/195 (47%), Gaps = 31/195 (15%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G++ C+ EG +C C+P V G +C RC + +Y F CK C C + T
Sbjct: 1268 CECHPAGAVGRHCSPEGGQCPCRPHVIGRQCTRCQMGYYGFPH--CKPCSCGQRLCEETT 1325
Query: 116 PNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
C +V+ QC+ + S +F P + C R +G
Sbjct: 1326 GTCLCPPRTVRPQCDMCETHSF-------------SFHPLAG--CEGCNCSR----MGTD 1366
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS + +C+ + G+C+CK ++G +CDRC Y F E C C CN G+ CD
Sbjct: 1367 GSASPECDRDHGQCRCKLRISGRQCDRCAPGFYRFPE--CLPCRCNRDGTEPGI--CDPE 1422
Query: 231 KGQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 1423 TGACLCKENVEGTEC 1437
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G SNRC + G G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1689 CNCHGHSNRC--------KDG-SGICINCQHNTAGEHCERCKEGYYGNAIHGSCQACLCP 1739
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDR 88
S C G RC CKPG TG C+R
Sbjct: 1740 HSNSFATGCIVTGGNMRCLCKPGYTGTLCER 1770
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 80/198 (40%), Gaps = 33/198 (16%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ G C +C+ YY G C C+C L + G C C P
Sbjct: 1284 GGQC-PCRPHVIGRQCTRCQMGYY---GFPHCKPCSCG----QRLCEETTGTCLCPPRTV 1335
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGS-VKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+CD C+ + + F AGC+ C C+ G+ +P CD GQC +L
Sbjct: 1336 RPQCDMCETHSFSFHPLAGCEGCNCSRMGTDGSASPECDRDHGQCRC-----------KL 1384
Query: 141 RVQSRK--NFDPAGNRIWDLR--RCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
R+ R+ P R + RC RD G+ C+ E G C CK V G +C
Sbjct: 1385 RISGRQCDRCAPGFYRFPECLPCRCNRD-------GTEPGICDPETGACLCKENVEGTEC 1437
Query: 196 DRCDVNHYDFGEAGCKSC 213
D C +D A K C
Sbjct: 1438 DACREGSFDLDPANPKGC 1455
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 14/133 (10%)
Query: 2 NCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNC 59
+C GFS C L + G C+ + P C C+ Y+ + +N C+ C C
Sbjct: 577 HCQGFSGACDPAGTLDSSLGF----CQCKLHVESPTCSICKPLYWNLAKENPDGCSECRC 632
Query: 60 NPIGSLNL--QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVK 113
+ G+++ +C +G C CK V GD CD C+ ++ ++ GC+ C+C+ G+V
Sbjct: 633 HVAGTVSGIGECGQLDGDCHCKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGAV- 691
Query: 114 NTPNCDSVKGQCE 126
TP C G C+
Sbjct: 692 -TPMCSGPSGVCQ 703
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 59/152 (38%), Gaps = 30/152 (19%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G CEC+PAG+V +C GQC R H R
Sbjct: 1264 GALPCECHPAGAVGR--HCSPEGGQCPC-------RPHVIGR---------------QCT 1299
Query: 160 RCKRDTYPLGH----GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCE 214
RC+ Y H L + G C C P +CD C+ + + F AGC+ C
Sbjct: 1300 RCQMGYYGFPHCKPCSCGQRLCEETTGTCLCPPRTVRPQCDMCETHSFSFHPLAGCEGCN 1359
Query: 215 CNPAGS-VKNTPNCDSVKGQCECKDNVEGAQC 245
C+ G+ +P CD GQC CK + G QC
Sbjct: 1360 CSRMGTDGSASPECDRDHGQCRCKLRISGRQC 1391
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G++ C+ G CQC+ V G
Sbjct: 653 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGAVTPMCSGPSGVCQCREHVVGKV 712
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 713 CQRPENNYY 721
>gi|301619895|ref|XP_002939321.1| PREDICTED: Usherin-like [Xenopus (Silurana) tropicalis]
Length = 5022
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 129/265 (48%), Gaps = 33/265 (12%)
Query: 1 CNCNGFSNRCFFDKEL--YNR---TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD---- 51
C CN + +C ++ L Y G GG C DC + G +C+ C++++Y+ +GD
Sbjct: 493 CQCNNHATKCHYNATLDPYPHDHDQGGGGVCEDCSHNTTGQHCQLCKEHFYRGAGDDPAA 552
Query: 52 -NFCTACNCNPIGSL--NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C C CN G++ N+ C G+C+CK V G +CD+C +Y+ ++ GC C
Sbjct: 553 IDVCKPCACNEAGAMGKNIPCQQIGGQCKCKMYVFGRQCDQCMDGYYNLTKSQAEGCLPC 612
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRG--RVHTELRVQSRKNFDPAGNRIWDLRRC 161
C+ +G+ CD GQC+ + R + ++Q+ + C
Sbjct: 613 RCSSSGTRIGDVTCDQYSGQCKCKPNFTGLQCDRCNLGFKLQNTFGEE-------SCVPC 665
Query: 162 KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
+TY GS+N CN G+C+CK V G C++C N+Y GCK C+CN G
Sbjct: 666 LCNTY-----GSINQFCNPISGQCKCKVDVKGLLCNKCPDNYYGPDALGCKQCDCNQDGI 720
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ T CD GQC CK N+ G QC
Sbjct: 721 IPGT-ICDVETGQCACKPNIGGRQC 744
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 115/239 (48%), Gaps = 35/239 (14%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNCNPIGSLNLQCNS-EGRCQCK 78
+ G C C+ + G C++C + ++ G+ C C CN GS+N CN G+C+CK
Sbjct: 629 YSGQC-KCKPNFTGLQCDRCNLGFKLQNTFGEESCVPCLCNTYGSINQFCNPISGQCKCK 687
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--- 135
V G C++C N+Y GCK C+CN G + T CD GQC + + + GR
Sbjct: 688 VDVKGLLCNKCPDNYYGPDALGCKQCDCNQDGIIPGT-ICDVETGQC-ACKPNIGGRQCN 745
Query: 136 --VHTELRVQSRKNFDP----AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG 189
V +VQ + + P I + C + T G+C CKP
Sbjct: 746 ECVDGYYKVQLKNSCLPCDCDVSGTINHSQYCDKST----------------GQCFCKPF 789
Query: 190 VTGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG KC+ C + Y+ F GC+ C+C+P G++ T CD + GQC+C N +G +C
Sbjct: 790 VTGQKCNICMSHKYNLSIFNLLGCQDCDCDPLGTLVGT-QCDPISGQCKCLPNNQGRRC 847
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 116/239 (48%), Gaps = 47/239 (19%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCKPGVTGDK 85
C+ + G C +C D YY+ N C C+C+ G++N S G+C CKP VTG K
Sbjct: 735 CKPNIGGRQCNECVDGYYKVQLKNSCLPCDCDVSGTINHSQYCDKSTGQCFCKPFVTGQK 794
Query: 86 CDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
C+ C + Y+ F GC+ C+C+P G++ T CD + GQC+ +++GR
Sbjct: 795 CNICMSHKYNLSIFNLLGCQDCDCDPLGTLVGT-QCDPISGQCKCLP-NNQGR------- 845
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTY---PLGHG---------GSLNLQC-NSEGRCQCKP- 188
R N +CK+ Y G G S N C + G+C C
Sbjct: 846 --RCN------------QCKKGFYLSNAQGEGCIPCSCHPKASYNETCTDLNGQCYCHDF 891
Query: 189 GVTGDKCDRCDVNHYDF-GEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG KCD C + F E G C++C+C+ AG++ + CDS+ GQC CK V G +C
Sbjct: 892 SVTGQKCDECKDFFFGFDPETGRCETCDCDLAGAISGS--CDSLTGQCYCKMFVRGLRC 948
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 22/226 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-NLQCNSE-GRCQCKPGVTGDKC 86
C+ D G C KC DNYY C C+CN G + C+ E G+C CKP + G +C
Sbjct: 686 CKVDVKGLLCNKCPDNYYGPDALG-CKQCDCNQDGIIPGTICDVETGQCACKPNIGGRQC 744
Query: 87 DRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
+ C +Y + C C+C+ +G++ ++ CD GQC + + + + + +
Sbjct: 745 NECVDGYYKVQLKNSCLPCDCDVSGTINHSQYCDKSTGQCFCKPFVTGQKCN--ICMSHK 802
Query: 146 KNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
N I++L C+ D PLG + QC+ G+C+C P G +C++C Y
Sbjct: 803 YNLS-----IFNLLGCQDCDCDPLG--TLVGTQCDPISGQCKCLPNNQGRRCNQCKKGFY 855
Query: 204 DF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD-NVEGAQC 245
GE GC C C+P S T C + GQC C D +V G +C
Sbjct: 856 LSNAQGE-GCIPCSCHPKASYNET--CTDLNGQCYCHDFSVTGQKC 898
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 119/290 (41%), Gaps = 75/290 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNYYQKS---GD----- 51
CNCNG ++ C +++ CL D G NC++C + K+ GD
Sbjct: 436 CNCNGHADYC-------DQSVTPYRCLCDINSHTYGANCDRCLPLFNDKAFHQGDQVNAY 488
Query: 52 --------NFCTACNCNPIGSLNLQCNSE-----GRCQ-CKPGVTGDKCDRCDVNHY--- 94
N T C+ N +L+ + G C+ C TG C C + Y
Sbjct: 489 NCRLCQCNNHATKCHYN--ATLDPYPHDHDQGGGGVCEDCSHNTTGQHCQLCKEHFYRGA 546
Query: 95 ---DFGEAGCKSCECNPAGSV-KNTPNCDSVKGQCESAQLSSRGRV-------HTELRVQ 143
CK C CN AG++ KN P C + GQC+ ++ GR + L
Sbjct: 547 GDDPAAIDVCKPCACNEAGAMGKNIP-CQQIGGQCK-CKMYVFGRQCDQCMDGYYNLTKS 604
Query: 144 SRKNFDP-----AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
+ P +G RI D+ C D Y G+C+CKP TG +CDRC
Sbjct: 605 QAEGCLPCRCSSSGTRIGDV-TC--DQY--------------SGQCKCKPNFTGLQCDRC 647
Query: 199 DVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ FGE C C CN GS+ C+ + GQC+CK +V+G C
Sbjct: 648 NLGFKLQNTFGEESCVPCLCNTYGSINQF--CNPISGQCKCKVDVKGLLC 695
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKP 79
G C C+ G C C + Y S N C C+C+P+G+L QC+ G+C+C P
Sbjct: 782 GQCF-CKPFVTGQKCNICMSHKYNLSIFNLLGCQDCDCDPLGTLVGTQCDPISGQCKCLP 840
Query: 80 GVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
G +C++C Y GE GC C C+P S T C + GQC S G+
Sbjct: 841 NNQGRRCNQCKKGFYLSNAQGE-GCIPCSCHPKASYNET--CTDLNGQCYCHDFSVTGQK 897
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
E + FDP R C D G+++ C+S G+C CK V G +C
Sbjct: 898 CDECK-DFFFGFDPETGRC---ETCDCDL-----AGAISGSCDSLTGQCYCKMFVRGLRC 948
Query: 196 DRC 198
++C
Sbjct: 949 NQC 951
>gi|431905319|gb|ELK10364.1| Netrin-4 [Pteropus alecto]
Length = 627
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADACHFDINVWEASGNRTGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS+ L +S G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKMCSCHPVGSVVLPFSSVTFCDPSNGDCPCKPGVAGPQCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCISS 465
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C +
Sbjct: 416 SNGDCPCKPGVAGPQCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDCISSTD 467
Query: 240 VE 241
++
Sbjct: 468 ID 469
>gi|350584654|ref|XP_003481795.1| PREDICTED: netrin-4-like [Sus scrofa]
Length = 628
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FGE GC+ C+C
Sbjct: 392 CKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGEYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCTSS 465
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FGE GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGPHCDRCMVGYWGFGEYGCRPCDC--AGS------CDPLTGDC 462
>gi|348543033|ref|XP_003458988.1| PREDICTED: laminin subunit gamma-2-like [Oreochromis niloticus]
Length = 1103
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 7/89 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S C D G HC+DCQG+ +G +CE+C+D +Y + C+ C CN
Sbjct: 3 CECNGRSQYCLHD-------ALGLHCVDCQGNTEGRHCERCKDGFYLQGAGQSCSPCRCN 55
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRC 89
P GS++ C+S GRC CK GVTGDKCDRC
Sbjct: 56 PTGSVSKSCDSTGRCSCKEGVTGDKCDRC 84
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C + G +CE C +Y + + C CNC+ S + QC++ G+C+C+PG G
Sbjct: 460 GECLKCVNNTKGRHCEDCVRGFYHRQPTDACKPCNCDVQRSESDQCDASGQCRCRPGFEG 519
Query: 84 DKCDR 88
+C R
Sbjct: 520 LRCQR 524
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRC 198
RCK Y G G GS++ C+S GRC CK GVTGDKCDRC
Sbjct: 35 RCKDGFYLQGAGQSCSPCRCNPTGSVSKSCDSTGRCSCKEGVTGDKCDRC 84
>gi|431896283|gb|ELK05699.1| Laminin subunit alpha-3 [Pteropus alecto]
Length = 3522
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 110/259 (42%), Gaps = 62/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D ++ + GG C++CQ + G NCEKC YY+ G
Sbjct: 533 CNCHGHAIDCYYDPDVERQKASLNIEGNYAGGGVCINCQHNTAGINCEKCAKGYYRPYGV 592
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+CN + + + S GRC CKP GD C++C V +Y+F C
Sbjct: 593 PATAPDGCIPCSCNSEHADDCE-QSSGRCICKPNFHGDNCEKCAVGYYNF-----PFCLR 646
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P + D V G + C +
Sbjct: 647 IPIFPISTPSPEDPVAGNIKGCD-------------------------------CNLE-- 673
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G L CN+ GRC C PGV G +CD C Y F C++C+C+ GS + TP
Sbjct: 674 -----GVLPEICNAHGRCLCHPGVEGPRCDACRSGFYSF--PICQACQCSALGSYQ-TP- 724
Query: 227 CDSVKGQCECKDNVEGAQC 245
C V GQCEC+ + G +C
Sbjct: 725 CSPVTGQCECRPGITGQRC 743
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 56/244 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C +GP C+ CR +Y C AC C+ +GS C+ G+C+C+PG+T
Sbjct: 684 GRCL-CHPGVEGPRCDACRSGFYSFP---ICQACQCSALGSYQTPCSPVTGQCECRPGIT 739
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+ +G++ DS G C+ +L+V
Sbjct: 740 GQRCDRCLSGAYDFPHCQGSSSSCDLSGTL------DSSLGYCQC-----------KLQV 782
Query: 143 QSRKNFDPA----GNRIWDLRRCKRDTYPLGHGGSLNLQCNS-------------EGRCQ 185
+S P W+L + + G QCN +G C
Sbjct: 783 ES-----PTCSICKPLYWNLTKENPN-------GCSECQCNVAGTVSGIGECGQRDGDCH 830
Query: 186 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
CK V+GD CD C+ ++ ++ GC+ C+C+ G++ TP C S G C+C+++V G
Sbjct: 831 CKSHVSGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGAI--TPMCSSPSGVCQCREHVVG 888
Query: 243 AQCR 246
C+
Sbjct: 889 KACQ 892
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 97/197 (49%), Gaps = 34/197 (17%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G++N C+ EG +C C+PGV G +C RC + +Y F CK C C
Sbjct: 1446 CECHPTGAINHHCSPEGGQCPCRPGVIGRQCTRCQMGYYGFPH--CKPCNCG-------R 1496
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC------KRDTYPLG 169
C+ + G+C L+ R + E+ +F P L C +R T
Sbjct: 1497 RLCEEMTGKCLCPPLTVRPQC--EVCETHSFSFHP-------LAGCEGCNCSRRGT---- 1543
Query: 170 HGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
G+ L+C+ + G+C+CKP +TG +CD+C Y F E C C C+ G+ CD
Sbjct: 1544 TAGAATLECDRDHGQCRCKPRITGRRCDQCASGFYHFPE--CIPCHCDRGGTKPAV--CD 1599
Query: 229 SVKGQCECKDNVEGAQC 245
G C CK+NVEGA+C
Sbjct: 1600 PETGACLCKENVEGAEC 1616
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 64/132 (48%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG SNRC G C++CQ + G +CE+C++ YY + C+ C C
Sbjct: 1879 CSCNGHSNRC---------QDGSGICINCQHNTAGEHCERCKEGYYGNAIQGSCSVCLCP 1929
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G +C CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1930 HSNSFATGCVVTGGNMQCSCKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGLLG 1988
Query: 114 NTPNCDSVKGQC 125
+CD + G C
Sbjct: 1989 ---SCDPLTGDC 1997
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCN----PIGSLNLQCNSE-GRCQCKPGVTGDKCDRCD 90
P CE C + + C CNC+ G+ L+C+ + G+C+CKP +TG +CD+C
Sbjct: 1515 PQCEVCETHSFSFHPLAGCEGCNCSRRGTTAGAATLECDRDHGQCRCKPRITGRRCDQCA 1574
Query: 91 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C C+ G+ CD G C
Sbjct: 1575 SGFYHFPE--CIPCHCDRGGTKPAV--CDPETGAC 1605
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G++ C+S G CQC+ V G
Sbjct: 831 CKSHVSGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGAITPMCSSPSGVCQCREHVVGKA 890
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 891 CQRPESNYY 899
>gi|344296458|ref|XP_003419924.1| PREDICTED: usherin [Loxodonta africana]
Length = 5205
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 128/263 (48%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-----SG 50
C CN S C +D + +R G GG C DC+ + G NCE C+D ++++ S
Sbjct: 575 CQCNSHSRSCHYDISVDPFPAEHRRGGGGVCDDCEHNTTGRNCELCKDYFFRQVDADPSA 634
Query: 51 DNFCTACNCNPIGSLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C C+C+ +G+ N L C+ G+C CK V+G +C C Y+ E GC C
Sbjct: 635 IDVCKPCDCDTVGTRNSSLVCDQIGGQCNCKRHVSGRRCSHCQDGFYNLQELDPEGCSPC 694
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + H + + +++ AG C+
Sbjct: 695 NCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDHCDFGFKFLTSWNDAG-----CEPCQC 749
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS+N C+ G+C+CK G +CD C N Y CKSC+C+ AG++
Sbjct: 750 NPH-----GSVNRFCHPLSGQCKCKKEAKGLQCDTCRENFYRLDVTTCKSCDCDMAGTLS 804
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T C++ GQC CK N G QC
Sbjct: 805 GT-VCNAKTGQCTCKPNFGGRQC 826
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 107/234 (45%), Gaps = 35/234 (14%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C+ C + D C C CNP GS+N C+ G+C+CK G +
Sbjct: 717 CKANVIGLRCDHCDFGFKFLTSWNDAGCEPCQCNPHGSVNRFCHPLSGQCKCKKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSR-------GRVH 137
CD C N Y CKSC+C+ AG++ T C++ GQC R G H
Sbjct: 777 CDTCRENFYRLDVTTCKSCDCDMAGTLSGT-VCNAKTGQCTCKPNFGGRQCSECLEGYFH 835
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDK 194
LR Q N + C D G++N + C S G+C CK GVTG
Sbjct: 836 --LRQQ---------NNSFLCLPCNCD-----QTGTVNGSVLCEKSTGQCPCKLGVTGLH 879
Query: 195 CDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C++C + Y+ GC+ C+C+ G++ T CD + GQC C N +G +C
Sbjct: 880 CNQCKPHRYNLTIGSFQGCQMCKCDSLGTLPGT-MCDPISGQCLCLPNRQGRRC 932
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 56/245 (22%)
Query: 29 CQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCKPGVT 82
C+ + G C +C + Y+ Q++ C CNC+ G++N + C S G+C CK GVT
Sbjct: 817 CKPNFGGRQCSECLEGYFHLRQQNNSFLCLPCNCDQTGTVNGSVLCEKSTGQCPCKLGVT 876
Query: 83 GDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C++C + Y+ GC+ C+C+ G++ T CD + GQC
Sbjct: 877 GLHCNQCKPHRYNLTIGSFQGCQMCKCDSLGTLPGT-MCDPISGQC-------------- 921
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS-EGR 183
L + +R+ RRC + + + G G+++ CNS G+
Sbjct: 922 LCLPNRQG-----------RRCNQCQPGFYISPGNVTGCLPCSCHVTGAVSQICNSLTGQ 970
Query: 184 CQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
C C+ + G CD C +++ F C+ C C+ +G++ T C SV G C CK V
Sbjct: 971 CVCQDASIAGQGCDHCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHSVTGHCFCKRFV 1028
Query: 241 EGAQC 245
G++C
Sbjct: 1029 TGSKC 1033
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN-LQCNSE-GRCQCKPGVTGDKC 86
C+ + G C+ CR+N+Y+ C +C+C+ G+L+ CN++ G+C CKP G +C
Sbjct: 768 CKKEAKGLQCDTCRENFYRLDVTT-CKSCDCDMAGTLSGTVCNAKTGQCTCKPNFGGRQC 826
Query: 87 DRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
C ++ + C C C+ G+V + C+ GQC +L G +H
Sbjct: 827 SECLEGYFHLRQQNNSFLCLPCNCDQTGTVNGSVLCEKSTGQCP-CKLGVTG-LHCNQCK 884
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
R N + + CK D+ G C+ G+C C P G +C++C
Sbjct: 885 PHRYNLTIGSFQ--GCQMCKCDSL----GTLPGTMCDPISGQCLCLPNRQGRRCNQCQPG 938
Query: 202 HYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
Y GC C C+ G+V C+S+ GQC C+D
Sbjct: 939 FYISPGNVTGCLPCSCHVTGAVSQI--CNSLTGQCVCQD 975
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 86/187 (45%), Gaps = 24/187 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G +C +C+ + Y + +F C C C+ +G+L C+ G+C C P G
Sbjct: 871 CKLGVTGLHCNQCKPHRYNLTIGSFQGCQMCKCDSLGTLPGTMCDPISGQCLCLPNRQGR 930
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQC--ESAQLSSRGRVHTEL 140
+C++C Y GC C C+ G+V C+S+ GQC + A ++ +G H +
Sbjct: 931 RCNQCQPGFYISPGNVTGCLPCSCHVTGAVSQI--CNSLTGQCVCQDASIAGQGCDHCK- 987
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC- 198
FDP R C+ L G+LN C+S G C CK VTG KCD C
Sbjct: 988 --DHYFGFDPQTGR------CQPCNCHLS--GALNETCHSVTGHCFCKRFVTGSKCDTCV 1037
Query: 199 -DVNHYD 204
+H D
Sbjct: 1038 PSASHLD 1044
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKP 79
G C+ G C+ C+D+Y+ ++G C CNC+ G+LN C+S G C CK
Sbjct: 969 GQCVCQDASIAGQGCDHCKDHYFGFDPQTGR--CQPCNCHLSGALNETCHSVTGHCFCKR 1026
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1027 FVTGSKCDTCVPSASHLD 1044
>gi|344269950|ref|XP_003406810.1| PREDICTED: laminin subunit alpha-3 [Loxodonta africana]
Length = 3429
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 106/259 (40%), Gaps = 62/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D ++ + GG C++CQ + G NCE C YY+ G
Sbjct: 457 CNCHGHAIDCYYDADVERQQASLNSQGIYAGGGVCINCQHNTAGVNCESCAKGYYRPHGV 516
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+CNP + + S GRC CKP GD C+ C V +Y F C
Sbjct: 517 PVDAPHGCIPCSCNPEQADGCEQGS-GRCYCKPNFHGDNCEECAVGYYSF-----PFCLR 570
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P V D V G D++ C+ D
Sbjct: 571 IPIFPVSTPSPEDPVAG---------------------------------DIKECECDL- 596
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G L C++ GRC C+PGV G +CD C + Y F C+ C C+ GS TP
Sbjct: 597 ----DGVLPEICDAHGRCLCRPGVEGPRCDTCRLGFYSF--PVCQVCWCSALGS-HQTP- 648
Query: 227 CDSVKGQCECKDNVEGAQC 245
C V GQC+C V G C
Sbjct: 649 CSPVVGQCDCWPGVTGQLC 667
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 88/201 (43%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G+L C+ EG +C C+P V G +C RC +Y F C+ C C + T
Sbjct: 1362 CECHPAGALGQGCSPEGGQCPCRPNVIGRQCTRCQTGYYGFPH--CRPCSCGRRLCEETT 1419
Query: 116 PNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN------RIWDLRRCKRDT 165
C +V+ QCE ++ S +F P W
Sbjct: 1420 GTCLCPPHTVRPQCEVCEIHSF-------------SFHPLAGCEGCNCSRW--------- 1457
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
G G+ +C+ + G+C+CKP + G +CDRC Y F E C C CN G+
Sbjct: 1458 ---GSVGAATPECDRDSGQCRCKPRIAGRQCDRCASGFYHFPE--CVPCNCNREGTEPEV 1512
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD G C CK+NVEG +C
Sbjct: 1513 --CDLGTGACLCKENVEGTEC 1531
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 116/279 (41%), Gaps = 69/279 (24%)
Query: 29 CQGDRDGPNCEKCRDNYYQ--------------------KSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCE+C YY +GD C C+ G L
Sbjct: 546 CKPNFHGDNCEECAVGYYSFPFCLRIPIFPVSTPSPEDPVAGD--IKECECDLDGVLPEI 603
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-- 126
C++ GRC C+PGV G +CD C + Y F C+ C C+ GS TP C V GQC+
Sbjct: 604 CDAHGRCLCRPGVEGPRCDTCRLGFYSF--PVCQVCWCSALGS-HQTP-CSPVVGQCDCW 659
Query: 127 ---SAQLSSR--GRVHTELRVQ-SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL------ 174
+ QL R H Q S + D AG L C+ + G S+
Sbjct: 660 PGVTGQLCDRYLSDAHDFPHYQGSGSDCDAAGTTESSLGYCQCKLHVEGPTCSICKPLYW 719
Query: 175 NL-----------QCNSEGR-------------CQCKPGVTGDKCDRCDVNHYDFGEA-- 208
NL QCN G C CKP V GD CD C+ ++ +
Sbjct: 720 NLAIENPSGCSECQCNVVGAVSGIGECGQGDGDCHCKPHVAGDSCDTCEDGYFALENSSY 779
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GC+ C+C+ G++ TP C S G C+C+++V G C+
Sbjct: 780 FGCQGCKCDIGGAL--TPTCSSPSGACQCREHVVGKACQ 816
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ +Y + C AC C
Sbjct: 1783 CNCNGHSNRC---------QDGSGICINCQHNTAGDHCERCKEGHYGSALHGSCRACPCP 1833
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1834 HTNSFATGCVVNGGNVRCSCKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNNNGQLG 1892
Query: 114 NTPNCDSVKGQC 125
+CD + G C
Sbjct: 1893 ---SCDPLTGDC 1901
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCN---PIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ +G+ +C+ + G+C+CKP + G +CDRC
Sbjct: 1431 PQCEVCEIHSFSFHPLAGCEGCNCSRWGSVGAATPECDRDSGQCRCKPRIAGRQCDRCAS 1490
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1491 GFYHFPE--CVPCNCNREGTEPEV--CDLGTGAC 1520
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ ++ C C C+ G+L C+S G CQC+ V G
Sbjct: 755 CKPHVAGDSCDTCEDGYFALENSSYFGCQGCKCDIGGALTPTCSSPSGACQCREHVVGKA 814
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 815 CQRPENNYY 823
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 183 RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC---E 235
RC CKPG TG +C+RC ++ FG C+ C CN G + +CD + G C E
Sbjct: 1850 RCSCKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNNNGQLG---SCDPLTGDCINQE 1905
Query: 236 CKDNVEGAQC 245
KD G +C
Sbjct: 1906 PKDGGPGEEC 1915
>gi|301615910|ref|XP_002937413.1| PREDICTED: laminin subunit gamma-2-like [Xenopus (Silurana)
tropicalis]
Length = 1288
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 10 CFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC 69
C FD +L +TG G C++C G DGP+CE C + YY + D C C C+ +GSLN QC
Sbjct: 238 CVFDPDLLAQTGSGFRCINCNGGTDGPHCEHCIEGYYPQP-DGTCGPCLCHTVGSLNQQC 296
Query: 70 NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 102
++ G+C+CKPGV G KCD+C + + GC+
Sbjct: 297 DNNGQCRCKPGVMGSKCDQCQPGFHSLSDTGCR 329
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C + G C++C+D ++ + + C AC C+P+G+++ C +G CQCK
Sbjct: 699 GECLKCIHNTAGYYCDRCKDGFFGNPLATAPELKCKACYCHPVGTVHQGCQKDGSCQCKT 758
Query: 80 GVTGDKCDR 88
G G CD+
Sbjct: 759 GFEGRSCDQ 767
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
GSLN QC++ G+C+CKPGV G KCD+C + + GC+
Sbjct: 290 GSLNQQCDNNGQCRCKPGVMGSKCDQCQPGFHSLSDTGCR 329
>gi|432111873|gb|ELK34915.1| Netrin-4 [Myotis davidii]
Length = 625
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 231 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 290
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 291 CKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 350
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AG NCD + G C S+
Sbjct: 351 --AG------NCDPLTGDCISS 364
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AG NCD + G C
Sbjct: 315 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AG------NCDPLTGDC 361
>gi|344252282|gb|EGW08386.1| Netrin-4 [Cricetulus griseus]
Length = 574
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 301 CKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKLGFYRDLRRPFSAPDA 360
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C AC+C+P+GS L NS G C CKPGV G CDRC V ++ FGE GC+ C+C
Sbjct: 361 CKACSCHPVGSATLPFNSVTVCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGEYGCRPCDC 420
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD G C S+
Sbjct: 421 --AGS------CDPHTGDCISS 434
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FGE GC+ C+C AGS CD G C
Sbjct: 385 SNGDCPCKPGVAGPHCDRCMVGYWGFGEYGCRPCDC--AGS------CDPHTGDC 431
>gi|390473860|ref|XP_003734678.1| PREDICTED: laminin subunit alpha-3 [Callithrix jacchus]
Length = 3338
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 114/262 (43%), Gaps = 66/262 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 359 CNCHGHTSDCYYDPDVEQQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 418
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CK GD C++C V +Y+F C
Sbjct: 419 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKLNFHGDNCEKCAVGYYNF-----PFCLR 472
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW---DLRRCKR 163
P + + D V G D GN W +L
Sbjct: 473 IPIFPISTPSSEDPVAG-------------------------DIKGN--WCDCNLE---- 501
Query: 164 DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
G L C++ GRC C+PGV G +CD C Y F C++C C+ GS +
Sbjct: 502 --------GVLPEICDAHGRCLCRPGVEGPQCDACRSGFYSF--PICQACWCSALGSYQ- 550
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
TP C SV GQCEC+ V G +C
Sbjct: 551 TP-CSSVTGQCECRPGVTGQRC 571
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 109/242 (45%), Gaps = 52/242 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS C+S G+C+C+PGVT
Sbjct: 512 GRCL-CRPGVEGPQCDACRSGFYSFP---ICQACWCSALGSYQTPCSSVTGQCECRPGVT 567
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG T N + QC ++H E
Sbjct: 568 GQRCDRCLSGAYDFPHCQGSSSACDPAG----TVNSNLEYCQC---------KLHVE--- 611
Query: 143 QSRKNFDPA----GNRIWDLRR----------CKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
P W+L + C + G G +C +G C CK
Sbjct: 612 ------GPTCSICKPLYWNLDKENPNGCSECQCHQAGTVSGTG-----ECRQGDGDCHCK 660
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
V GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G
Sbjct: 661 SHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSV--CSGASGVCQCREHVVGKA 718
Query: 245 CR 246
C+
Sbjct: 719 CQ 720
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 90/225 (40%), Gaps = 55/225 (24%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ +G +C C P V G +C RC HY
Sbjct: 1255 NSARSLVAFYHKGA----LPCECHPAGATGPHCSPDGGQCPCWPNVIGRQCTRCATGHYG 1310
Query: 96 FGEAGCKSCECNPAGSVKNTPNCD----SVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
F C+ C C + T C +V+ QCE+ + S +F P
Sbjct: 1311 F--PYCRPCSCGQNLCEEMTGQCRCPPRTVRPQCEACETHSF-------------SFHPV 1355
Query: 152 -----------GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
G + C RD+ G+C+CKP +TG +CDRC
Sbjct: 1356 AGCEACNCSRRGTVEAAMLECDRDS----------------GQCRCKPRITGQQCDRCAS 1399
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F E C C CN G+ CD G C CK+NVEG +C
Sbjct: 1400 GFYRFPE--CIPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1440
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 18/131 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1692 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCERCQEGYYGNAIHGSCRACPCP 1742
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKN 114
S C G +C CK G TG +C+RC ++ + C+ C CN G +
Sbjct: 1743 HTNSFATGCVVNGGNVQCSCKAGYTGTQCERCAPGYFGNPQKFRGSCQPCNCNSNGQLG- 1801
Query: 115 TPNCDSVKGQC 125
+CD + G C
Sbjct: 1802 --SCDPLTGDC 1810
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLN---LQCNSE-GRCQCKPGVTGDKCDRCDV 91
P CE C + + C ACNC+ G++ L+C+ + G+C+CKP +TG +CDRC
Sbjct: 1340 PQCEACETHSFSFHPVAGCEACNCSRRGTVEAAMLECDRDSGQCRCKPRITGQQCDRCAS 1399
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1400 GFYRFPE--CIPCNCNRDGTEPGV--CDPGTGAC 1429
>gi|300798041|ref|NP_001178538.1| laminin subunit alpha-5 precursor [Rattus norvegicus]
gi|149034036|gb|EDL88819.1| laminin, alpha 5, isoform CRA_a [Rattus norvegicus]
Length = 3713
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 104/232 (44%), Gaps = 33/232 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
GHC C+ DGP+C++C Y+ G C AC C+P GSL+ QC + G C C+PG TG
Sbjct: 608 GHC-QCRPGFDGPHCDRCLPGYH---GYPDCHACACDPRGSLDQQCGAGGLCHCRPGYTG 663
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR-- 141
C C Y F C C C+ GS+ T CD GQC R RV T LR
Sbjct: 664 ATCQECSPGFYGF--PSCIPCHCSADGSMHTT--CDPTTGQCR-----CRPRV-TGLRCD 713
Query: 142 --VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
V NF C+ + +P G + ++ C C+ V G CDRC
Sbjct: 714 MCVPGAYNFP----------YCEAGSCHPAGLAPANPALPEAQAPCTCRAHVEGPSCDRC 763
Query: 199 DVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
++ + GC C C+P G++ C GQC CK +V G C +
Sbjct: 764 KPGYWGLSSSNPEGCTRCSCDPRGTLGGVTECQG-NGQCFCKAHVCGKTCAA 814
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 116/286 (40%), Gaps = 68/286 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G + C++D E+ R GG CLDCQ G NCE+C +Y+
Sbjct: 363 CNCHGHAYDCYYDPEVDRRNASQNLDNVYQGGGVCLDCQHHTTGINCERCVPGFYRAPDQ 422
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---------- 96
+ C C+C + + GRC C+P TG++C C + DF
Sbjct: 423 PLDSPHVCQPCDCESDFTDGTCEDLTGRCYCRPNFTGERCSACAEGYVDFPHCYPLPSFP 482
Query: 97 ----GEAGCKS-----CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
GE + C+CN AG+ N D G+C + N
Sbjct: 483 HNDTGEQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRCVC-----------------KPN 525
Query: 148 FDPAGNRIWDLRRCKRDTY-PLGHG------GSLNLQCNSE-GRCQCKPGVTGDKCDRCD 199
F GN C Y P H G N C+ E G+C C+ G GDKCD C
Sbjct: 526 FQ--GNHC---ELCAPGFYGPSCHPCQCSSPGVANGLCDPESGQCTCRTGFEGDKCDHCA 580
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ ++ F C+ C C+PAG++ CD G C+C+ +G C
Sbjct: 581 LGYFHF--PLCQLCGCSPAGTLPQ--GCDE-SGHCQCRPGFDGPHC 621
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 110/265 (41%), Gaps = 48/265 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN---FCTAC 57
C C+G S+RC G C+ CQ + +G CE+CR + + C +C
Sbjct: 1864 CQCHGHSDRCLPGS---------GTCVGCQHNTEGDQCERCRPGFVSSDPSDPASPCVSC 1914
Query: 58 NCNPIGSLN-------LQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
C P+ + + N +C C+PG G C+RC + + C+ C+C+
Sbjct: 1915 PC-PLAVPSNNFADGCILRNGRTQCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDCS 1973
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRG--RVHTELRVQS-RKNFDPAGNRIWDLRRCKR 163
G +CD + G C RG R T R +S F GN + C R
Sbjct: 1974 GNGDPNMIFSDCDPLTGAC-------RGCLRHTTGPRCESCAPGF--YGNALLP-GNCTR 2023
Query: 164 -DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGS 220
D P G C+ + GRC CK GVTG +CD C H+ F + GC C C PA
Sbjct: 2024 CDCSPCG-----TETCDPQTGRCLCKAGVTGQRCDHCLEGHFGFEQCQGCHPCACGPAAE 2078
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
C+ GQC C+ G QC
Sbjct: 2079 GS---ECNPQTGQCHCRPGTTGPQC 2100
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1972 CSGNGDPNMIFSDCDPLT-----GACRGCLRHTTGPRCESCAPGFYGNALLPGNCTRCDC 2026
Query: 60 NPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPN 117
+P G+ C+ + GRC CK GVTG +CD C H+ F + GC C C PA
Sbjct: 2027 SPCGTET--CDPQTGRCLCKAGVTGQRCDHCLEGHFGFEQCQGCHPCACGPAAEGSE--- 2081
Query: 118 CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCKRDTYPLGHGGSLN 175
C+ GQC H + + A W L + C+R P GH
Sbjct: 2082 CNPQTGQC-----------HCRPGTTGPQCLECAPG-YWGLPEKGCRRCQCPRGH----- 2124
Query: 176 LQCNSE-GRCQCKPGVTGDKCDRCDVNH 202
C+ GRC C PG++G++CD C H
Sbjct: 2125 --CDPHTGRCTCPPGLSGERCDTCSQQH 2150
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+P V G +CD C Y + C+ C+C+ AG++ + CD GQC CK+NV+
Sbjct: 1552 GQCRCRPNVAGRRCDTCAPGFYSY--PSCRPCDCHEAGTMASV--CDPFTGQCHCKENVQ 1607
Query: 242 GAQC 245
G++C
Sbjct: 1608 GSRC 1611
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 92/232 (39%), Gaps = 44/232 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTA-----CNCNPIGSLNLQCNSE---GRCQCKPG 80
+G D P+C + +G+ A C+CN G+ C + GRC CKP
Sbjct: 466 AEGYVDFPHCYPLPSFPHNDTGEQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRCVCKPN 525
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G+ C+ C Y C C+C+ G CD GQC
Sbjct: 526 FQGNHCELCAPGFYG---PSCHPCQCSSPGVANGL--CDPESGQCTC------------- 567
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPL------GHGGSLNLQCNSEGRCQCKPGVTGDK 194
R F+ G++ D +PL G+L C+ G CQC+PG G
Sbjct: 568 ----RTGFE--GDKC-DHCALGYFHFPLCQLCGCSPAGTLPQGCDESGHCQCRPGFDGPH 620
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CDRC ++ + + C +C C+P GS+ C + G C C+ GA C+
Sbjct: 621 CDRCLPGYHGYPD--CHACACDPRGSLDQ--QCGA-GGLCHCRPGYTGATCQ 667
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEGRCQCKPGVTGD 84
C+ +GP+C++C+ Y+ S N CT C+C+P G+L +C G+C CK V G
Sbjct: 751 CRAHVEGPSCDRCKPGYWGLSSSNPEGCTRCSCDPRGTLGGVTECQGNGQCFCKAHVCGK 810
Query: 85 KCDRCD-----VNHYDFGEAGCKSCECNPAGSV 112
C C ++H D+ GC+SC C+ G++
Sbjct: 811 TCAACKDGFFGLDHADY--YGCRSCRCDVGGAL 841
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
+CN + G+C C+PG TG +C C ++ E GC+ C+C P G +CD G+C
Sbjct: 2081 ECNPQTGQCHCRPGTTGPQCLECAPGYWGLPEKGCRRCQC-PRG------HCDPHTGRCT 2133
Query: 236 CKDNVEGAQC 245
C + G +C
Sbjct: 2134 CPPGLSGERC 2143
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C+ C +Y C C+C+ G++ C+ G+C CK V G +CD
Sbjct: 1556 CRPNVAGRRCDTCAPGFYSYPS---CRPCDCHEAGTMASVCDPFTGQCHCKENVQGSRCD 1612
Query: 88 RCDVNHYDFGEAGCKSC 104
+C V + A K C
Sbjct: 1613 QCRVGTFSLDAANPKGC 1629
>gi|391344663|ref|XP_003746615.1| PREDICTED: laminin subunit alpha-like [Metaseiulus occidentalis]
Length = 912
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 101/235 (42%), Gaps = 38/235 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C C+ G CE C D ++ G N CTACNC+P GS CN GRC+CK G TG
Sbjct: 426 GQCF-CKPGFTGDRCETCADGFF---GHN-CTACNCSPKGSAQDICNGRGRCKCKLGWTG 480
Query: 84 DKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
DKC++C +Y C+ C C+P G+ + CD+ E R
Sbjct: 481 DKCEKCAAGYYWKENLQTCEPCLCDPYGAEGES--CDA------------------EGRC 520
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCNSEGRCQCKPGVTG 192
+ NF P D + YPL GS + +E RC CK V G
Sbjct: 521 ICKPNFQPGPKHRCDTCATEHYLYPLCEKCNCHPGGSISGSRKCETGAETRCTCKERVRG 580
Query: 193 DKCDRCD--VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KCD C + GC+ C C+ AG+ C+ GQC CK N EG C
Sbjct: 581 RKCDACKPLFTRLSLSKEGCEECFCDAAGTHSAILACNPKDGQCPCKMNREGRGC 635
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV---TGDK 85
C+ G CEKC YY K C C C+P G+ C++EGRC CKP +
Sbjct: 474 CKLGWTGDKCEKCAAGYYWKENLQTCEPCLCDPYGAEGESCDAEGRCICKPNFQPGPKHR 533
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C HY + C+ C C+P GS+ + C++ + R + RV+ R
Sbjct: 534 CDTCATEHYLY--PLCEKCNCHPGGSISGSRKCET----------GAETRCTCKERVRGR 581
Query: 146 K--NFDPAGNRIWDLRRCKRDTYPLGHGG-SLNLQCN-SEGRCQCKPGVTGDKCDRC-DV 200
K P R+ + + + G S L CN +G+C CK G C C D
Sbjct: 582 KCDACKPLFTRLSLSKEGCEECFCDAAGTHSAILACNPKDGQCPCKMNREGRGCSHCADG 641
Query: 201 NHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
H + GC+ CECNPAGS + T CD G C+C+ + G +C
Sbjct: 642 THKRKADNLFGCEGCECNPAGSWRTT--CDGRDG-CKCRALISGEKC 685
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 34/259 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C N K + + GG C+DC + DG NCEKC+ YY+ G ++ C
Sbjct: 205 CRYNATVEELGLSKNINGQYIGGGVCIDCMHNTDGINCEKCKPKYYRLQGKYLTDEDVCG 264
Query: 56 ACNCNPIGSLNLQCNSE-----GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
C C G + + E RC+C P + CDRC HY G C+ C+C G
Sbjct: 265 RCPCEFEGRDRQRYSGECDDLTARCKCDPMYSEPLCDRCSDGHY--GYPDCRPCDCFQNG 322
Query: 111 SVKNTPNCDSVKGQCES--AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
++ G CE+ + + Q + F ++ CK +
Sbjct: 323 ---------TIGGICENNGEPCPCKENFGGKFCKQCARGF-------YEHPSCKPCSCNR 366
Query: 169 GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
H ++ G+CQC PG G +CD C+V Y++ + C+SC C+ +G K C+
Sbjct: 367 QHSLDPDVCDFESGKCQCAPGFGGRQCDSCEVGFYNYPD--CQSCNCHQSGVEKEV--CN 422
Query: 229 SVKGQCECKDNVEGAQCRS 247
++ GQC CK G +C +
Sbjct: 423 AITGQCFCKPGFTGDRCET 441
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 20/173 (11%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLN----LQCNSEGRCQCKPGVTGDKCDRCD--V 91
C+ C +Y C CNC+P GS++ + +E RC CK V G KCD C
Sbjct: 534 CDTCATEHYLYP---LCEKCNCHPGGSISGSRKCETGAETRCTCKERVRGRKCDACKPLF 590
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDP 150
+ GC+ C C+ AG+ C+ GQC RG H RK
Sbjct: 591 TRLSLSKEGCEECFCDAAGTHSAILACNPKDGQCPCKMNREGRGCSHCADGTHKRK---- 646
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
+ ++ C+ + GS C+ C+C+ ++G+KCDR + Y
Sbjct: 647 -ADNLFGCEGCECNP-----AGSWRTTCDGRDGCKCRALISGEKCDRTFSDSY 693
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKC 86
C+ +R+G C C D +++ DN C C CNP GS C+ C+C+ ++G+KC
Sbjct: 626 CKMNREGRGCSHCADGTHKRKADNLFGCEGCECNPAGSWRTTCDGRDGCKCRALISGEKC 685
Query: 87 DRCDVNHY 94
DR + Y
Sbjct: 686 DRTFSDSY 693
>gi|297270276|ref|XP_001092970.2| PREDICTED: multiple EGF-like-domains 9 [Macaca mulatta]
Length = 636
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 260 ECRPGYQGLHCETCKEGFYPNYTSGLCQPCDCSPHGALSILCNSSGKCQCKVGVIGSTCD 319
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 320 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQ-NSKGN-HCE---ECKEG 369
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ + E C QCK G G C++C+ +Y+F
Sbjct: 370 FYQSPDATKECLRCPCSA--VTSTGSCSIKSSELEPECDQCKDGYMGPNCNKCENGYYNF 427
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 428 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 469
>gi|351700250|gb|EHB03169.1| Laminin subunit alpha-1 [Heterocephalus glaber]
Length = 2985
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 103/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG CE+C D +Y GD C AC+C+ GSL+ C+ E GRC C+
Sbjct: 882 GECLKCVGNTDGARCERCADGFY---GDAVAAKNCQACDCHEQGSLSGVCHRETGRCDCR 938
Query: 79 PGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +HY GC C C+ AGS T + +GQC H
Sbjct: 939 PHVTGQRCDQCLPDHYGLDAGLGCLPCNCSVAGS---TSEACTAQGQC-----------H 984
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPG 189
V R+ RC Y GG C G C C P
Sbjct: 985 CVPGVAGRR-----------CDRCSHGFYAYRDGGCTPCDCAHTQNSCDPKSGECTCPPH 1033
Query: 190 VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C H+ +G E GC+ C C+ GS CD + GQC CK G C
Sbjct: 1034 TRGPKCEECVAEHWGWGAERGCQVCNCSRPGS--EGSQCDLLSGQCPCKAEFGGQSC 1088
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + N+ GG C+ CQ + G NCE C D YY+
Sbjct: 341 CNCHNKAKDCYYDENVANQKKSLNTAGQFRGGGVCVGCQQNTMGINCETCVDGYYRPHKV 400
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C C+C+P+GSL+ C + G+C CK G G++CDRC +
Sbjct: 401 SPYEDEPCRPCDCDPLGSLSFVCIKDDLQSNLHDGLWPGQCPCKAGYGGERCDRCQFAYK 460
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
F C C+C+PAGSV + P
Sbjct: 461 GF--PSCVHCDCSPAGSVNDDP 480
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 26/226 (11%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C ++Y C CNC+ GS + C ++G+C C PGV G +CD
Sbjct: 936 DCRPHVTGQRCDQCLPDHYGLDAGLGCLPCNCSVAGSTSEACTAQGQCHCVPGVAGRRCD 995
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y + + GC C+C +N+ CD G+C + +RG E + +
Sbjct: 996 RCSHGFYAYRDGGCTPCDC---AHTQNS--CDPKSGEC-TCPPHTRGPKCEECVAE---H 1046
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFG 206
+ R + C R GS QC+ G+C CK G CD+C + + +F
Sbjct: 1047 WGWGAERGCQVCNCSRP-------GSEGSQCDLLSGQCPCKAEFGGQSCDQCSLGYRNFP 1099
Query: 207 EAGCKSCECNPAGSV-------KNTPNCDSVKGQCECKDNVEGAQC 245
+ C C+C+ G++ + +C G C CK+NV G QC
Sbjct: 1100 D--CVPCDCDLKGTLPASCALDRGVCSCMEDTGTCSCKENVIGLQC 1143
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 99/253 (39%), Gaps = 58/253 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC---NPIGSLNLQCNSEGRC-- 75
G CLDC + G +CE+C +Y + C C C P + + C+ +
Sbjct: 769 GVCLDCTHNTTGDHCEQCLPGFYGAPSRGTPGGCQRCACPLTTPSNNFSPTCHLDEEEDM 828
Query: 76 ---QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
QC PG G C+RC +Y C C+C+ CD V G+C
Sbjct: 829 VCDQCGPGYAGTWCERCADGYYGNPTVPGGSCLPCDCSGNVDPSEPGGCDPVTGEC---- 884
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-------DTYPLG--------HGGSL 174
++ N D A RC+R D GSL
Sbjct: 885 ------------LKCVGNTDGA--------RCERCADGFYGDAVAAKNCQACDCHEQGSL 924
Query: 175 NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKG 232
+ C+ E GRC C+P VTG +CD+C +HY GC C C+ AGS T + +G
Sbjct: 925 SGVCHRETGRCDCRPHVTGQRCDQCLPDHYGLDAGLGCLPCNCSVAGS---TSEACTAQG 981
Query: 233 QCECKDNVEGAQC 245
QC C V G +C
Sbjct: 982 QCHCVPGVAGRRC 994
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G++CDRC + F C C+C+PAGSV + P + C CKDNVE
Sbjct: 439 GQCPCKAGYGGERCDRCQFAYKGF--PSCVHCDCSPAGSVNDDPCAEP----CLCKDNVE 492
Query: 242 GAQC 245
G C
Sbjct: 493 GEAC 496
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 20/117 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP-------IGSLNLQCNSEG--- 73
G CL+C+ + G +CE C YY G TA +C+P S + C EG
Sbjct: 1430 GKCLNCRDNTAGNHCELCAPGYY---GRVTGTAQDCSPCTCPRQHPASFSPTCVLEGDGG 1486
Query: 74 -RC-QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC 125
RC C G G +C+RC V ++ + G +G C+ C+C+P GSV + +CD + GQC
Sbjct: 1487 FRCNACVVGHEGRRCERCSVGYHGNPGLSGGHCQKCDCSPHGSVHS--HCDPLSGQC 1541
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSLNLQCNS-EGRCQCKP 79
G C C +G CE+C Y+ G + C C+C+P GS++ C+ G+C C+P
Sbjct: 1486 GFRCNACVVGHEGRRCERCSVGYHGNPGLSGGHCQKCDCSPHGSVHSHCDPLSGQCVCRP 1545
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCE 105
G TG +CD C H ++ C SC+
Sbjct: 1546 GATGLRCDGCQPRHV-LVDSSCVSCD 1570
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 167 PLGHGGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPA 218
P H S + C EG RC C G G +C+RC V ++ + G +G C+ C+C+P
Sbjct: 1468 PRQHPASFSPTCVLEGDGGFRCNACVVGHEGRRCERCSVGYHGNPGLSGGHCQKCDCSPH 1527
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GSV + +CD + GQC C+ G +C
Sbjct: 1528 GSVHS--HCDPLSGQCVCRPGATGLRC 1552
>gi|260797338|ref|XP_002593660.1| hypothetical protein BRAFLDRAFT_131952 [Branchiostoma floridae]
gi|229278887|gb|EEN49671.1| hypothetical protein BRAFLDRAFT_131952 [Branchiostoma floridae]
Length = 3505
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 120/263 (45%), Gaps = 70/263 (26%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGS------LNL------ 67
G CL C G+ G CE+C D Y+ GD C C C+P GS LN
Sbjct: 1108 GECLKCIGNTAGDECERCADGYF---GDAINAKNCQRCLCHPRGSYQEDCDLNTGQCRCR 1164
Query: 68 -----------QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV--KN 114
C+ +G+C+CKPGV G +CDRCDV Y F E GCK+C+C+ G
Sbjct: 1165 PNVIGRDCDQCACDEDGQCRCKPGVGGQQCDRCDVGFYGFSEDGCKACDCSRTGGFCDDQ 1224
Query: 115 TPNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD-LRRCKR-DTYPL 168
T +C ++V +CES + + G WD L C D P+
Sbjct: 1225 TGDCICPPNTVGIRCESCKPETFG---------------------WDGLNGCTPCDCDPV 1263
Query: 169 GHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G G+ C+ + G+C+C +G +C+ C ++DF C+ C CN AG+ NT N
Sbjct: 1264 GSEGN---DCDLTTGQCKCLNDFSGRQCNMCQFGYFDF--PTCRECTCNQAGTDPNTCNA 1318
Query: 228 DSV-----KGQCECKDNVEGAQC 245
+ V G C CK NVEG C
Sbjct: 1319 NDVCACADNGTCSCKPNVEGKSC 1341
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 29/139 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
C C G ++ C +D+ + +R GG C +C+ + G NCE+C D +Y+ +G
Sbjct: 464 CQCFGHADECVYDQGVADRRESVNILGIYEGGGVCQNCRANTMGNNCEQCIDGFYRPAGI 523
Query: 51 ----DNFCTACNCNPIG---SLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNH 93
N C C CNPIG S QC + G+C C+PG G +CDRC +
Sbjct: 524 PRDDPNPCRECQCNPIGEDPSRRGQCVKDDTRIAEGLEPGQCYCRPGFGGPRCDRCARGY 583
Query: 94 YDFGEAGCKSCECNPAGSV 112
G C+ C+C+ AGSV
Sbjct: 584 T--GYPNCEPCDCSVAGSV 600
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 114/287 (39%), Gaps = 67/287 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG + C G CL C + G NCE C YY + + C+ C
Sbjct: 982 CQCNGHAEEC---------DDVTGTCLSCLHNTAGRNCEVCAPGYYGDATRGTPDDCSRC 1032
Query: 58 NCNPIGSLNLQCNSEGRC----------QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C + S N N C +C PG G +C++C ++ + E G CK C
Sbjct: 1033 ACPLVESSN---NFSPTCVAMDGGVFCDRCPPGHEGFQCEKCADGYFGNPLEVGNLCKQC 1089
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR- 163
CN + NC+++ G+C ++ G + + D + + C+R
Sbjct: 1090 TCNGNIDPTDEGNCNTITGECLKCIGNTAGD-------ECERCADGYFGDAINAKNCQRC 1142
Query: 164 DTYPLGHGGSLNLQCN-SEGRCQCKPGVT----------------------GDKCDRCDV 200
+P GS C+ + G+C+C+P V G +CDRCDV
Sbjct: 1143 LCHP---RGSYQEDCDLNTGQCRCRPNVIGRDCDQCACDEDGQCRCKPGVGGQQCDRCDV 1199
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
Y F E GCK+C+C+ G CD G C C N G +C S
Sbjct: 1200 GFYGFSEDGCKACDCSRTGGF-----CDDQTGDCICPPNTVGIRCES 1241
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +CDRC + G C+ C+C+ AGSV N D G C CKDNVE
Sbjct: 563 GQCYCRPGFGGPRCDRCARGYT--GYPNCEPCDCSVAGSV----NEDVCVGPCICKDNVE 616
Query: 242 GAQC 245
G C
Sbjct: 617 GQFC 620
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 30 QGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
Q D +C YY C C C+ GSL+ C+ G CQC+PG+TG C
Sbjct: 1677 QNDEVASQYSRCEQGYYGNPTIPGGRCYECACDQSGSLSPICDQVTGACQCQPGITGRAC 1736
Query: 87 DRCDVNHYDFGEAGCKSCE 105
D+C Y E GC +C+
Sbjct: 1737 DQCQ-PRYALTERGCINCD 1754
>gi|432945423|ref|XP_004083591.1| PREDICTED: laminin subunit alpha-2-like [Oryzias latipes]
Length = 3139
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 114/240 (47%), Gaps = 58/240 (24%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ D G C+KC+ + G C C+CN GS + C+ G+C+C+PGV+G KCDR
Sbjct: 922 CKEDVLGRQCDKCKTHGITTGG--VCVPCHCNSFGSKSFDCDDLGQCRCQPGVSGPKCDR 979
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C ++F E GC +C+C+ G+ NCD+ GQC
Sbjct: 980 CSRGFFNFQEGGCTACQCSHVGN-----NCDANTGQCICPP------------------- 1015
Query: 149 DPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGDK 194
+ G R RC + + GH GSL+ QCN + G C C+ G+K
Sbjct: 1016 NTIGERC---DRCAPNHW--GHDITTGCKECGCNVVGSLSQQCNMNTGCCSCRESFRGEK 1070
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK---------GQCECKDNVEGAQC 245
CD C + + DF + C CEC+ AGS ++ +CD + G+C CK NVEG+ C
Sbjct: 1071 CDECQIGYRDFPQ--CIRCECSFAGS--DSQSCDMERRVCACADQTGKCSCKVNVEGSNC 1126
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 111/266 (41%), Gaps = 66/266 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNCNP 61
N FS C D+ G C CQ GP CE+C + +Y + C CNCN
Sbjct: 799 NNFSPTCHLDE------GGKLVCNRCQMGYTGPRCERCSNGFYGQPDVPGGSCQPCNCN- 851
Query: 62 IGSLNLQCNSEGRC--------QCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGS 111
NL + G C +C+ G G C+ C +Y C+ C+C+ GS
Sbjct: 852 ---YNLDLSVPGSCDPITGQCLKCRQGYGGAACESCADGYYGDAILAKNCQPCQCHINGS 908
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGH 170
+ C+ GQC + D G R+C + T+ +
Sbjct: 909 LSEV--CNKESGQCPCKE-------------------DVLG------RQCDKCKTHGITT 941
Query: 171 GG-----------SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
GG S + C+ G+C+C+PGV+G KCDRC ++F E GC +C+C+ G
Sbjct: 942 GGVCVPCHCNSFGSKSFDCDDLGQCRCQPGVSGPKCDRCSRGFFNFQEGGCTACQCSHVG 1001
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ NCD+ GQC C N G +C
Sbjct: 1002 N-----NCDANTGQCICPPNTIGERC 1022
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G ++ C+F++ + + + GG C+ C+ + G NC+ C YY+ +
Sbjct: 329 CNCHGKADECYFNQTVADLSLSLDVQGQYRGGGVCIGCRNNTAGINCQSCVPGYYRPAEI 388
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
+N C C+C+P GS++ C ++ G C CK G G +CDRC V + F
Sbjct: 389 SADEENPCELCSCDPHGSVSQSCVADSGQATPSQPAGSCWCKEGYGGPQCDRCAVGYKGF 448
Query: 97 GEAGCKSCECNPAGSVKNTP 116
C+ C C+ GS+ P
Sbjct: 449 --PSCERCNCSMEGSINTDP 466
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 101/231 (43%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C+CN F ++ F +L G C CQ GP C++C ++ Q+ G CTAC
Sbjct: 948 CHCNSFGSKSFDCDDL-------GQC-RCQPGVSGPKCDRCSRGFFNFQEGG---CTACQ 996
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPN 117
C+ +G+ N N+ G+C C P G++CDRC NH+ GCK C CN GS+ N
Sbjct: 997 CSHVGN-NCDANT-GQCICPPNTIGERCDRCAPNHWGHDITTGCKECGCNVVGSLSQQCN 1054
Query: 118 CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ 177
++ C S + S RG E ++ R D +C R GS +
Sbjct: 1055 MNT---GCCSCRESFRGEKCDECQIGYR-----------DFPQCIR--CECSFAGSDSQS 1098
Query: 178 CNSE----------GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
C+ E G+C CK V G CDRC + + GC C C
Sbjct: 1099 CDMERRVCACADQTGKCSCKVNVEGSNCDRCKPDTFGLSARNPLGCSKCYC 1149
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 102/251 (40%), Gaps = 56/251 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS------------------GDNFCTACNCNPIGSL 65
GHCLDC + G C+ C YY + +NF C+ + G
Sbjct: 754 GHCLDCYHNTAGQYCDTCLPGYYGNATRGSPADCQPCACPLLLPSNNFSPTCHLDEGG-- 811
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVK 122
L CN +C+ G TG +C+RC Y D C+ C CN + +CD +
Sbjct: 812 KLVCN-----RCQMGYTGPRCERCSNGFYGQPDVPGGSCQPCNCNYNLDLSVPGSCDPIT 866
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPA-----GNRIWDLRRCKRDTYPLG--HGGSLN 175
GQC ++ R+ + A + + ++ P GSL+
Sbjct: 867 GQC----------------LKCRQGYGGAACESCADGYYGDAILAKNCQPCQCHINGSLS 910
Query: 176 LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
CN E G+C CK V G +CD+C + G C C CN GS + +CD + GQC
Sbjct: 911 EVCNKESGQCPCKEDVLGRQCDKCKTHGITTGGV-CVPCHCNSFGS--KSFDCDDL-GQC 966
Query: 235 ECKDNVEGAQC 245
C+ V G +C
Sbjct: 967 RCQPGVSGPKC 977
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G +CDRC V + F C+ C C+ GS+ N D C CK+NVE
Sbjct: 425 GSCWCKEGYGGPQCDRCAVGYKGF--PSCERCNCSMEGSI----NTDPCITPCVCKENVE 478
Query: 242 GAQC 245
G C
Sbjct: 479 GGNC 482
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C C+G S+ C + + C +CQ + +G CE+C +Y + + C C
Sbjct: 1400 CQCSGHSSTCDPETSI---------CQNCQDNTEGDRCERCMPGFYGVVRGSSDDCKPCA 1450
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
C NP + + C +EG RC C G G C+RC ++ C+ C+C+
Sbjct: 1451 CPLPNPENNFSPTCIAEGLDDYRCTACPEGYEGKYCERCATGYHGNPRMPGGRCEECKCS 1510
Query: 108 PAGSVKNTPNCDSVKGQC 125
G++ CDSV GQC
Sbjct: 1511 SWGALAGP--CDSVTGQC 1526
>gi|426240252|ref|XP_004014026.1| PREDICTED: usherin [Ovis aries]
Length = 5187
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKE-----LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--- 52
C CN S C ++ L + G GG C DC+ + G NCE+C+D ++++ G +
Sbjct: 575 CECNSHSRSCHYNISVDPFPLEHYRGGGGVCDDCEHNTAGKNCEQCKDYFFRQVGADPSA 634
Query: 53 --FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C C+C+ +G+ N C+ G +C CK V+G +C++C Y+ E GC C
Sbjct: 635 IDVCRPCDCDKVGTRNRSFLCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQEWDPDGCSPC 694
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + H + ++F+ G C+
Sbjct: 695 NCNTSGTVDGDITCHPNSGQCKCKANVIGLRCDHCNFGFKFLQSFNDDG-----CEPCQC 749
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS+N CN G+C+CK G +CD C + Y GCK+C+C+ AGS
Sbjct: 750 NLH-----GSVNRLCNPLSGQCECKKEAKGLQCDTCREHFYGLDATGCKACDCDVAGSQS 804
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK NV G +C
Sbjct: 805 GT-VCDAWTGQCVCKPNVGGRRC 826
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNY-YQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C + Y YQ+ +F C C+C+ G++N L C+ S G+C CK
Sbjct: 813 GQCV-CKPNVGGRRCSECVEGYFYQRQNHSFLCLPCSCDRTGTINGSLLCDKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG C++C+ + Y+ GC+ CEC+P G++ CD + GQC
Sbjct: 872 LGVTGLHCNQCEPHRYNLTVGSFQGCQMCECDPLGTLPGN-ICDPLSGQCPC-------- 922
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
+ SR+ RRC + + + G G++N CNS
Sbjct: 923 ------LPSRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G CD C ++ F C+ C C+ +G++ T C SV GQC C
Sbjct: 966 LTGQCVCQDASIAGQSCDYCKDLYFGFDSLTGRCQPCNCHLSGALNET--CHSVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KRFVTGSKC 1032
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 101/264 (38%), Gaps = 66/264 (25%)
Query: 16 LYNRTGHGGHCLDCQGDRDGP-----------------------NCEKCRDNYYQKSGDN 52
Y R H CL C DR G +C +C + Y + +
Sbjct: 834 FYQRQNHSFLCLPCSCDRTGTINGSLLCDKSTGQCPCKLGVTGLHCNQCEPHRYNLTVGS 893
Query: 53 F--CTACNCNPIGSL--NLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEA-GCKSCEC 106
F C C C+P+G+L N+ G+C C P G +C++C Y G A GC C C
Sbjct: 894 FQGCQMCECDPLGTLPGNICDPLSGQCPCLPSRQGRRCNQCQPGFYISPGNATGCLPCSC 953
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS-------RKNFDPAGNRIWDLR 159
+ G+V + C+S+ GQC S G QS FD R
Sbjct: 954 HTTGAVNHI--CNSLTGQCVCQDASIAG--------QSCDYCKDLYFGFDSLTGR----- 998
Query: 160 RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC--DVNHYDFGEAGCKSCECN 216
C+ L G+LN C+S G+C CK VTG KCD C + +H D N
Sbjct: 999 -CQPCNCHLS--GALNETCHSVTGQCFCKRFVTGSKCDTCVPNASHLDIS---------N 1046
Query: 217 PAGSVKNTPNCDSVKGQCECKDNV 240
P G K +GQ + +
Sbjct: 1047 PLGCSKTPSQQPPPRGQVQSSSAI 1070
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 100/252 (39%), Gaps = 50/252 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNYYQKS--GDNFCTAC 57
C C G +NRC + T CL + +G +C++C Y K + A
Sbjct: 518 CQCYGHANRC-------DTTSQPYRCLCSQESFTEGLHCDRCLPLYNNKPFRQSDHVHAF 570
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
NC P +CNS R C ++ D + HY G C CE N AG N
Sbjct: 571 NCKPC-----ECNSHSRS-CHYNIS---VDPFPLEHYRGGGGVCDDCEHNTAGK-----N 616
Query: 118 CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ 177
C+ QC+ G + + V + D G R + +
Sbjct: 617 CE----QCKDYFFRQVGADPSAIDVCRPCDCDKVGTR------------------NRSFL 654
Query: 178 CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQ 233
C+ G+C CK V+G +C++C Y+ E GC C CN +G+V C GQ
Sbjct: 655 CDQIGGQCNCKRHVSGRQCNQCQNGFYNLQEWDPDGCSPCNCNTSGTVDGDITCHPNSGQ 714
Query: 234 CECKDNVEGAQC 245
C+CK NV G +C
Sbjct: 715 CKCKANVIGLRC 726
>gi|410986497|ref|XP_003999546.1| PREDICTED: usherin [Felis catus]
Length = 1595
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--- 52
C CN S C ++ + + G GG C DC+ + G NCE C+D ++++ G +
Sbjct: 575 CQCNNHSRSCHYNISVDPFPFEHHRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGADTSA 634
Query: 53 --FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C C+C+ +G+ N L C+ G +C CK V+G +C++C Y+ E GC C
Sbjct: 635 VDVCKPCDCDKMGTRNSDLLCDEMGGQCNCKRRVSGRQCNQCQNGFYNLQELDPDGCSPC 694
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + H + +N++ G C+
Sbjct: 695 NCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDHCNFGFKFLRNYNDDG-----CEPCQC 749
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS++ C+ G+C+CK G +CD C + Y CK+C+C+ AGS+
Sbjct: 750 NLH-----GSVHKLCDPLSGQCECKKEARGLQCDTCREHFYGLDIPSCKACDCDLAGSLP 804
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK V G QC
Sbjct: 805 GT-VCDAKTGQCLCKPRVGGRQC 826
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 117/249 (46%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G CL C+ G C +C + Y+ Q++ C CNC+ G++N L C+ S G+C CK
Sbjct: 813 GQCL-CKPRVGGRQCNECLEGYFFLQQNNSFLCLPCNCDKTGTVNGSLLCDKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG C++C+ + Y+ GC+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLHCNQCEPHRYNLTSGNFQGCQMCECDSLGTLPGT-TCDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCK--RDTYPLGHG-------------GSLNLQCNS 180
L + +R+ RRC R + + G G+++ CNS
Sbjct: 921 ----LCLPNRQG-----------RRCNQCRPGFYISPGNATGCLPCSCHITGAVHHICNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ V G CD C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCICQDASVAGQSCDHCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KRFVTGSKC 1032
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 119/237 (50%), Gaps = 30/237 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCNS-EGRCQC 77
GG C +C+ G C +C++ +Y Q+ + C+ CNCN G+++ + C+ G+C+C
Sbjct: 659 GGQC-NCKRRVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQNSGQCKC 717
Query: 78 KPGVTGDKCDRCDVNH---YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G +CD C+ ++ + GC+ C+CN GSV CD + GQCE + +RG
Sbjct: 718 KANVIGLRCDHCNFGFKFLRNYNDDGCEPCQCNLHGSVHKL--CDPLSGQCECKK-EARG 774
Query: 135 RVHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGHGGSL-NLQCNSE-GRCQCKPGVT 191
L+ + R++F G I + C D GSL C+++ G+C CKP V
Sbjct: 775 -----LQCDTCREHF--YGLDIPSCKACDCDL-----AGSLPGTVCDAKTGQCLCKPRVG 822
Query: 192 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +C+ C ++ + C C C+ G+V + CD GQC CK V G C
Sbjct: 823 GRQCNECLEGYFFLQQNNSFLCLPCNCDKTGTVNGSLLCDKSTGQCPCKLGVTGLHC 879
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 91/221 (41%), Gaps = 29/221 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G +C +C + Y + NF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLHCNQCEPHRYNLTSGNFQGCQMCECDSLGTLPGTTCDPISGQCLCLPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ G+V + C+S+ GQC S G+ +
Sbjct: 930 RCNQCRPGFYISPGNATGCLPCSCHITGAVHHI--CNSLTGQCICQDASVAGQSCDHCK- 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKRFVTGSKCDTCVPR 1038
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
+H D NP G K +GQ + +
Sbjct: 1039 ASHLDVN---------NPLGCSKTPSQQPPPRGQVQSSSAI 1070
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G +C+ C+D+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCICQDASVAGQSCDHCKDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKR 1025
Query: 80 GVTGDKCDRC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
VTG KCD C +H D NP G K +GQ +S+
Sbjct: 1026 FVTGSKCDTCVPRASHLDVN---------NPLGCSKTPSQQPPPRGQVQSS 1067
>gi|281338276|gb|EFB13860.1| hypothetical protein PANDA_000445 [Ailuropoda melanoleuca]
Length = 3244
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 114/260 (43%), Gaps = 60/260 (23%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D + ++ GG C++CQ + G NCE C YY+ G
Sbjct: 259 CNCHGHALDCYYDPDVERQQASLNIHGIYAGGGVCINCQHNTAGINCENCAKGYYRPYGV 318
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+CNP + + S GRC CKP GD C++C V +Y+F C
Sbjct: 319 PVDAPHGCIPCSCNPEHADACEPGS-GRCTCKPNFRGDNCEKCAVGYYNF--PFCLRIPI 375
Query: 107 NPAGSVK-NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
P + + P +KG+ AG C D
Sbjct: 376 FPISTPRPEDPVAGDIKGK--------------------------AGG-------CDCD- 401
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G L C++ GRC C+PGV G +CD C + Y F C++C+C+ GS + TP
Sbjct: 402 ----FEGVLPEICDAYGRCLCRPGVEGPRCDACRLGFYSF--PICQACQCSVLGSYQ-TP 454
Query: 226 NCDSVKGQCECKDNVEGAQC 245
C+ V GQCEC + G +C
Sbjct: 455 -CNPVTGQCECFPGITGQRC 473
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 108/228 (47%), Gaps = 24/228 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS CN G+C+C PG+T
Sbjct: 414 GRCL-CRPGVEGPRCDACRLGFYSFP---ICQACQCSVLGSYQTPCNPVTGQCECFPGIT 469
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ ++ K ES S ++ L
Sbjct: 470 GQRCDRCLSGAYDFPHCQGSSSACDPAGTLDSSLGYCQCKAHVESPSCSICKPLYWNLAK 529
Query: 143 QSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
+ +P+G C + G + +G C CK V+GD CD C+
Sbjct: 530 E-----NPSG--------CSECQCHVAGTVSGIGECGQRDGDCHCKSHVSGDSCDTCEDG 576
Query: 202 HYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
++ ++ GC+ C+C+ G++ TP C G C C+++V G C+
Sbjct: 577 YFALEKSNYFGCQGCQCDIGGAI--TPLCGGPSGGCRCREHVVGKACQ 622
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 91/202 (45%), Gaps = 45/202 (22%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G++ C++EG +C C+P V G +C RC +Y F CK C C P
Sbjct: 1176 CECHPTGAIGRHCSAEGGQCPCRPSVVGRQCTRCRTGYYGFPH--CKPCSCGPR------ 1227
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL------- 168
C+ V G+C L V + V +F +PL
Sbjct: 1228 -LCEEVTGKC----LCPPHTVRPQCDVCDTYSFS---------------FHPLAGCEGCN 1267
Query: 169 ----GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
G G+ L+C+ E G+C+CKP VTG +CDRC Y F E C C CN G+
Sbjct: 1268 CSRRGTVGAATLECDREHGQCRCKPRVTGRQCDRCAAGFYHFPE--CLPCHCNRDGTEPE 1325
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD G C CK+NVEG +C
Sbjct: 1326 V--CDPGTGACLCKENVEGTEC 1345
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 102/245 (41%), Gaps = 50/245 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPI-------------------------G 63
C+ + G NCEKC YY FC PI G
Sbjct: 348 CKPNFRGDNCEKCAVGYYNFP---FCLRIPIFPISTPRPEDPVAGDIKGKAGGCDCDFEG 404
Query: 64 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 123
L C++ GRC C+PGV G +CD C + Y F C++C+C+ GS + TP C+ V G
Sbjct: 405 VLPEICDAYGRCLCRPGVEGPRCDACRLGFYSF--PICQACQCSVLGSYQ-TP-CNPVTG 460
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
QCE + R D + +D C+ + G+L+ +S G
Sbjct: 461 QCECFPGITGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTLD---SSLGY 505
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
CQCK V C C +++ + +GC C+C+ AG+V C G C CK +V
Sbjct: 506 CQCKAHVESPSCSICKPLYWNLAKENPSGCSECQCHVAGTVSGIGECGQRDGDCHCKSHV 565
Query: 241 EGAQC 245
G C
Sbjct: 566 SGDSC 570
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 18/131 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S+RC G C++CQ + G +CE+C++ +Y + C+ C C
Sbjct: 1597 CDCNGHSSRC---------QDGSGICINCQHNTAGDHCERCKEGHYGNAIQGSCSVCLCP 1647
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKN 114
S C G RC CKPG TG +C+RC ++ + C+ C CN G +
Sbjct: 1648 HSNSFATGCVVNGGNMRCFCKPGYTGTQCERCAPGYFGNPQKLGGSCRPCNCNSNGQLG- 1706
Query: 115 TPNCDSVKGQC 125
+C + G C
Sbjct: 1707 --SCHPLTGDC 1715
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN---PIGSLNLQCNSE-GRCQCKP 79
G CL C P C+ C + C CNC+ +G+ L+C+ E G+C+CKP
Sbjct: 1234 GKCL-CPPHTVRPQCDVCDTYSFSFHPLAGCEGCNCSRRGTVGAATLECDREHGQCRCKP 1292
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CDRC Y F E C C CN G+ CD G C
Sbjct: 1293 RVTGRQCDRCAAGFYHFPE--CLPCHCNRDGTEPEV--CDPGTGAC 1334
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 62/154 (40%), Gaps = 34/154 (22%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G CEC+P G++ +C + GQC + S GR T
Sbjct: 1172 GALPCECHPTGAIGR--HCSAEGGQC-PCRPSVVGRQCT--------------------- 1207
Query: 160 RCKRDTYPLGH------GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKS 212
RC+ Y H G L + G+C C P +CD CD + F AGC+
Sbjct: 1208 RCRTGYYGFPHCKPCSCGPRLCEEVT--GKCLCPPHTVRPQCDVCDTYSFSFHPLAGCEG 1265
Query: 213 CECNPAGSV-KNTPNCDSVKGQCECKDNVEGAQC 245
C C+ G+V T CD GQC CK V G QC
Sbjct: 1266 CNCSRRGTVGAATLECDREHGQCRCKPRVTGRQC 1299
>gi|410928442|ref|XP_003977609.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5-like
[Takifugu rubripes]
Length = 3607
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
GHCL C+ + DGP CE+C+ ++ C C C+P SL++ C + G C+C+P +G
Sbjct: 497 GHCL-CKPEFDGPRCEQCKSGFHSYPN---CQVCTCDPHTSLDISCTTSGHCRCQPNYSG 552
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
CD+C +Y G C C+C+ GS + +CD V GQC + G V
Sbjct: 553 ASCDQCAPGYY--GYPSCTPCQCSAEGS--HYSSCDGVTGQC----VCRAGVV------- 597
Query: 144 SRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
+ D + C T +P G + LQ GRC+C+ V G CDRC +
Sbjct: 598 -GRRCDACTQGSYGFPSCDAATCHPAGSMQHV-LQ-PPVGRCECRRHVEGPACDRCKPLY 654
Query: 203 YDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ GC C+CN AG++ C GQC CK N
Sbjct: 655 WKLSPDIPDGCSDCDCNTAGTLSGVAECAQDSGQCHCKPN 694
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 116/270 (42%), Gaps = 54/270 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN----FCTA 56
CNCNG S+RC G C+DCQ + G +CEKC+ ++ S + +C++
Sbjct: 1757 CNCNGHSDRCL---------DGSGTCVDCQHNTAGDHCEKCQGGFHGNSSVDGQAVWCSS 1807
Query: 57 CNCNPIGSLN------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
C C N +Q + +C C G TG KC+RC +Y G +C P
Sbjct: 1808 CPCPLTVPSNNFAEGCVQKSDRMQCLCMAGYTGAKCERCTPGYY--GNPMVLGSKCQPCH 1865
Query: 111 SVKNT-PN-----CDSVKGQCESAQLSSRGRVHTEL-------RVQSRKNFDPAGNRIWD 157
NT PN C + G+C + + G +H ++ + KN +
Sbjct: 1866 CHGNTDPNMLFTDCHPLTGECLNCMHNIAG-LHCDVCAPGFYGDAVTAKNCTKCDCSLCG 1924
Query: 158 LRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECN 216
C R T G+C CK GVTG +CDRC+ + F +GC SC+CN
Sbjct: 1925 TESCDRHT----------------GQCHCKAGVTGSRCDRCEEGSFGFDSCSGCHSCDCN 1968
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ ++ CD GQC C+ V G CR
Sbjct: 1969 ASAALVEP--CDPRSGQCACQHGVNGPNCR 1996
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 47/228 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C YY C C C+ +GSL C++ G C CKP G +C++
Sbjct: 456 CRTGFQGYECDQCAPGYYNYP---LCQLCGCSSVGSLPEVCDASGHCLCKPEFDGPRCEQ 512
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C + + C+ C C+P S+ + C + G C + + N+
Sbjct: 513 CKSGFHSY--PNCQVCTCDPHTSLDIS--C-TTSGHC-----------------RCQPNY 550
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG-----------RCQCKPGVTGDKCDR 197
A +C Y G+ QC++EG +C C+ GV G +CD
Sbjct: 551 SGAS-----CDQCAPGYY--GYPSCTPCQCSAEGSHYSSCDGVTGQCVCRAGVVGRRCDA 603
Query: 198 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C Y F C + C+PAGS+++ G+CEC+ +VEG C
Sbjct: 604 CTQGSYGF--PSCDAATCHPAGSMQHV--LQPPVGRCECRRHVEGPAC 647
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 24/197 (12%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G+ + C G +C C+P V G C C ++ F C+ C+C
Sbjct: 1328 NNGALPCGCHEVGAESDTCEPFGGQCHCRPNVIGRDCSTCATGYWGF--PNCRPCDCG-- 1383
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
+ C+ V G C + + T+ Q+ G + + C R L
Sbjct: 1384 -----SRLCEPVSGNCICPPRTLQPEC-TQCEPQTFGCHPVVGCEVCN---CSRPGVTLP 1434
Query: 170 HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
++ C+ G+C+CK V G +CDRC + G C+ C CN AG+ + CD
Sbjct: 1435 -----DINCDRVSGQCRCKNNVVGRQCDRCAPGFH--GYPNCRPCNCNEAGTEEQV--CD 1485
Query: 229 SVKGQCECKDNVEGAQC 245
SV GQC CK+NV+G++C
Sbjct: 1486 SVSGQCLCKENVQGSRC 1502
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 80/186 (43%), Gaps = 39/186 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL+C + G +C+ C +Y GD CT C+C+ G+ + ++ G+C CK
Sbjct: 1884 GECLNCMHNIAGLHCDVCAPGFY---GDAVTAKNCTKCDCSLCGTESCDRHT-GQCHCKA 1939
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
GVTG +CDRC+ + F +GC SC+CN + ++ CD GQC
Sbjct: 1940 GVTGSRCDRCEEGSFGFDSCSGCHSCDCNASAALVEP--CDPRSGQCACQH--------- 1988
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS------EGRCQCKPGVTG 192
G + R+C + G G C G C+C G+TG
Sbjct: 1989 -------------GVNGPNCRQCAPGFWDYGPNGCKRCDCRGGHCDPRTGECRCAEGMTG 2035
Query: 193 DKCDRC 198
+CD C
Sbjct: 2036 KQCDTC 2041
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 80/192 (41%), Gaps = 26/192 (13%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-NLQCNSEGRCQCKP 79
G G C+ C+ G C+ C Y G C A C+P GS+ ++ GRC+C+
Sbjct: 585 GVTGQCV-CRAGVVGRRCDACTQGSY---GFPSCDAATCHPAGSMQHVLQPPVGRCECRR 640
Query: 80 GVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
V G CDRC ++ GC C+CN AG++ C GQC + G
Sbjct: 641 HVEGPACDRCKPLYWKLSPDIPDGCSDCDCNTAGTLSGVAECAQDSGQCHCKPNACSGTC 700
Query: 137 HT----ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRCQCKPGVT 191
T +Q + F G C+ D GGS C + GRC C+P V
Sbjct: 701 STCKDGFYNLQQQNYFGCQG--------CQCDV-----GGSEGRACGDGNGRCGCRPNVE 747
Query: 192 GDKCDRCDVNHY 203
G KC+ +HY
Sbjct: 748 GPKCNVPRRDHY 759
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 43/200 (21%)
Query: 57 CNCNPIGSLNLQCNSEGR---CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C C+ G+++ C + C CK G TGD CD C F C++C+C+ G
Sbjct: 388 CECSAAGTVDNSCRPHPQTRTCICKLGFTGDHCDTCAAG---FHGLNCQACQCSGPGCPD 444
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK--RDTYPL--- 168
CD++ GQ G T G + ++ +C YPL
Sbjct: 445 GL--CDTLTGQ---------GVCRT-------------GFQGYECDQCAPGYYNYPLCQL 480
Query: 169 ---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL C++ G C CKP G +C++C + + C+ C C+P S+ +
Sbjct: 481 CGCSSVGSLPEVCDASGHCLCKPEFDGPRCEQCKSGFHSY--PNCQVCTCDPHTSLDIS- 537
Query: 226 NCDSVKGQCECKDNVEGAQC 245
C + G C C+ N GA C
Sbjct: 538 -C-TTSGHCRCQPNYSGASC 555
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
H G C C+ G C++C + + + C +C+CN +L C+ G+C C+ G
Sbjct: 1931 HTGQC-HCKAGVTGSRCDRCEEGSFGFDSCSGCHSCDCNASAALVEPCDPRSGQCACQHG 1989
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCEC 106
V G C +C +D+G GCK C+C
Sbjct: 1990 VNGPNCRQCAPGFWDYGPNGCKRCDC 2015
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ GV G C +C +D+G GCK C+C +CD G+C C + +
Sbjct: 1982 GQCACQHGVNGPNCRQCAPGFWDYGPNGCKRCDCRGG-------HCDPRTGECRCAEGMT 2034
Query: 242 GAQC 245
G QC
Sbjct: 2035 GKQC 2038
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C++C ++ G C CNCN G+ C+S G+C CK V G +CD
Sbjct: 1447 CKNNVVGRQCDRCAPGFH---GYPNCRPCNCNEAGTEEQVCDSVSGQCLCKENVQGSRCD 1503
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
+C V + GC SC C
Sbjct: 1504 QCKVGTFHLDPTNPKGCTSCFC 1525
>gi|297280786|ref|XP_002801987.1| PREDICTED: Usherin-like [Macaca mulatta]
Length = 5099
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 132/271 (48%), Gaps = 45/271 (16%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD---- 51
C CN S C+++ + + G GG C DC+ + G NCE C+D ++++ G
Sbjct: 574 CQCNSHSKSCYYNVSVDPFPFEHFRGGGGVCNDCEHNTTGRNCELCKDYFFRQVGADPSA 633
Query: 52 -NFCTACNCNPIGSLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C C+C+ +G+ N + C+ G+C CK V+G +C++C Y+ E GC C
Sbjct: 634 IDVCKPCDCDKVGARNGSILCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPC 693
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + LR R NF G + LR
Sbjct: 694 NCNTSGTVDGDITCHQNSGQCKCKANVIG-------LRCD-RCNF---GFKF--LRSFND 740
Query: 164 DTYPLG--------HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
D G HG S+N CN G+C+CK G +CD C N Y CK+C+
Sbjct: 741 D----GCEPCQCNLHG-SVNKFCNPLSGQCECKKEAKGLQCDTCRENFYGLDVTNCKACD 795
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ AGS+ T C++ GQC CK NVEG QC
Sbjct: 796 CDTAGSLPGT-VCNAKTGQCICKPNVEGRQC 825
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + ++Y + ++F C CNC+ G++N L C+ S G+C CK
Sbjct: 812 GQCI-CKPNVEGRQCNKCLEGHFYLRQNNSFLCLPCNCDKAGTINGSLLCDKSTGQCPCK 870
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ GC+ CEC+ G++ T CD + GQC
Sbjct: 871 LGVTGLRCNQCEPHRYNLTIDNFQGCQMCECDSLGTLPGT-ICDPISGQC---------- 919
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G GS++ CNS
Sbjct: 920 ----LCVPNRQG-----------RRCNQCQPGFYISPGSANGCLPCSCHTAGSVHHICNS 964
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C ++ F C+ C C+ +G++ T C V GQC C
Sbjct: 965 LTGQCVCQDASIAGQRCDQCKDRYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1022
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1023 KQFVTGSKC 1031
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 34/233 (14%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + D+ C C CN GS+N CN G+C+CK G +
Sbjct: 716 CKANVIGLRCDRCNFGFKFLRSFNDDGCEPCQCNLHGSVNKFCNPLSGQCECKKEAKGLQ 775
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV-------HT 138
CD C N Y CK+C+C+ AGS+ T C++ GQC + + GR H
Sbjct: 776 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQC-ICKPNVEGRQCNKCLEGHF 833
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKC 195
LR N + C D G++N L C+ S G+C CK GVTG +C
Sbjct: 834 YLR----------QNNSFLCLPCNCD-----KAGTINGSLLCDKSTGQCPCKLGVTGLRC 878
Query: 196 DRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C+ + Y+ GC+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 879 NQCEPHRYNLTIDNFQGCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 930
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 869 CKLGVTGLRCNQCEPHRYNLTIDNFQGCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 928
Query: 85 KCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y G A GC C C+ AGSV + C+S+ GQC S G+ + +
Sbjct: 929 RCNQCQPGFYISPGSANGCLPCSCHTAGSVHHI--CNSLTGQCVCQDASIAGQRCDQCK- 985
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 986 DRYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1037
Query: 200 VNHYD 204
+H D
Sbjct: 1038 ASHLD 1042
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++C+D Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 967 GQCVCQDASIAGQRCDQCKDRYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1024
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1025 FVTGSKCDACVPSASHLD 1042
>gi|354478529|ref|XP_003501467.1| PREDICTED: netrin-4 [Cricetulus griseus]
Length = 627
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 331 CKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKLGFYRDLRRPFSAPDA 390
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C AC+C+P+GS L NS G C CKPGV G CDRC V ++ FGE GC+ C+C
Sbjct: 391 CKACSCHPVGSATLPFNSVTVCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGEYGCRPCDC 450
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD G C S+
Sbjct: 451 --AGS------CDPHTGDCISS 464
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FGE GC+ C+C AGS CD G C
Sbjct: 415 SNGDCPCKPGVAGPHCDRCMVGYWGFGEYGCRPCDC--AGS------CDPHTGDC 461
>gi|395818874|ref|XP_003782837.1| PREDICTED: laminin subunit beta-1 [Otolemur garnettii]
Length = 1764
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 105/224 (46%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G +CE C+ YYQ N
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRSCELCKPFYYQHPERDIRDPNV 394
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C Y G
Sbjct: 395 CEPCTCDPAGSQNEGICDSYTDFSAGLIAGQCRCKLYVEGEHCDVCKEGFYGLSAEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L V + Q + N + R
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGHCYCKRL-----VMGQHCDQCLPEYWGLSNDLDGCRP 509
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C++E G+C C+P + G +C+ + +Y
Sbjct: 510 CDCDL-----GGALNNSCSAESGQCSCRPHMIGRQCNEVESGYY 548
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK+CEC+ GS+ CD V GQC
Sbjct: 810 TFGFGPSGCKACECHLQGSLNAF--CDPVTGQC 840
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 101/277 (36%), Gaps = 61/277 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DSVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGE 98
SG F +C +P+ S+ C C PG G +CD C +
Sbjct: 918 PCPDGPDSGRQFARSCYQDPV-------TSQLACVCDPGYIGSRCDDCASGFFGNPSVVG 970
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WD 157
C+ C+C+ + CD G+C + G H +L F G+ + D
Sbjct: 971 GSCQPCQCHHNIDTTDPEACDKDTGRCLKCLYHTEGE-HCQL-----CRFGYYGDALQQD 1024
Query: 158 LRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE-A 208
R+C + G++ CN + G+C C P V G CDRC N +
Sbjct: 1025 CRKCV-----CNYLGTMQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGT 1079
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C CN S P+C+ GQC C G C
Sbjct: 1080 GCDPCNCNAEHSFG--PSCNEFTGQCHCMPGFGGRTC 1114
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK+CEC+ GS+ CD V
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKACECHLQGSLNAF--CDPV 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 837 TGQCHCFQGVYARQC 851
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 87/248 (35%), Gaps = 79/248 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE C D Y+ + N C CNCN S L
Sbjct: 296 GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLAT 354
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDS 120
S G C C+ G C+ C +Y E C+ C C+PAGS
Sbjct: 355 GNVSGGVCDDCQHNTMGRSCELCKPFYYQHPERDIRDPNVCEPCTCDPAGSQN------- 407
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+G C+S S G +
Sbjct: 408 -EGICDSYTDFSAGLI-------------------------------------------- 422
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G+C+CK V G+ CD C Y GCKSC CNP G++ CDS G C CK
Sbjct: 423 AGQCRCKLYVEGEHCDVCKEGFYGLSAEDPFGCKSCACNPLGTIPGGNPCDSETGHCYCK 482
Query: 238 DNVEGAQC 245
V G C
Sbjct: 483 RLVMGQHC 490
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 98/234 (41%), Gaps = 22/234 (9%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C AC C+ GSLN C+ G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKACECHLQGSLNAFCDPVTGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CDSV G+C S Q + G H R
Sbjct: 847 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDSVTGECLSCQDYTTG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-----NSEGRCQCKPGVTGDKCD 196
+ DP R C P G C S+ C C PG G +CD
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGP-DSGRQFARSCYQDPVTSQLACVCDPGYIGSRCD 956
Query: 197 RCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
C + C+ C+C+ + CD G+C +C + EG C+
Sbjct: 957 DCASGFFGNPSVVGGSCQPCQCHHNIDTTDPEACDKDTGRCLKCLYHTEGEHCQ 1010
>gi|359068608|ref|XP_003586493.1| PREDICTED: multiple epidermal growth factor-like domains protein
9-like, partial [Bos taurus]
Length = 585
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 109/226 (48%), Gaps = 22/226 (9%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G CE C + +Y C C+CNP G+L+ C+S G+CQCK GVTG CD
Sbjct: 208 ECQPGYQGLRCETCTEGFYLNGTSGRCLPCDCNPRGALSTVCSSSGKCQCKVGVTGSSCD 267
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH----TELRVQ 143
RC +YDF E GC C+CN + +CD++ G C + Q +S G H TE Q
Sbjct: 268 RCQDGYYDFNENGCLPCQCN-----NRSASCDALTGACFNCQDNSEGD-HCEECTEGFYQ 321
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNH 202
S P G++ + RC G + SE C QCK G TG C+ C+ +
Sbjct: 322 S-----PDGSK--ECLRCPCSAV-TSTGSCIIKLGESEPECVQCKDGYTGQNCNDCNHGY 373
Query: 203 YDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
Y+ ++ C C+C+ TP C+ G+C C N G C
Sbjct: 374 YN-SDSICVECQCHGHVDPVKTPRVCEPESGECISCLHNTTGFWCE 418
>gi|402896535|ref|XP_003911352.1| PREDICTED: multiple epidermal growth factor-like domains protein 9
[Papio anubis]
Length = 601
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 225 ECRPGYQGLHCETCKEGFYPNYTSGLCQPCDCSPHGALSILCNSSGKCQCKVGVIGSTCD 284
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 285 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQ-NSKGN-HCE---ECKEG 334
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ + E C QCK G G C++C+ +Y+F
Sbjct: 335 FYQSPDATKECLRCPCSA--VTSTGSCSIKSSELEPECDQCKDGYMGPNCNKCENGYYNF 392
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 393 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 434
>gi|296222399|ref|XP_002757170.1| PREDICTED: laminin subunit alpha-3 isoform 2 [Callithrix jacchus]
Length = 3280
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 113/259 (43%), Gaps = 62/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 359 CNCHGHTSDCYYDPDVEQQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 418
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CK GD C++C V +Y+F C
Sbjct: 419 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKLNFHGDNCEKCAVGYYNF-----PFCLR 472
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P + + D V G D++ C +
Sbjct: 473 IPIFPISTPSSEDPVAG---------------------------------DIKGCDCNL- 498
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G L C++ GRC C+PGV G +CD C Y F C++C C+ GS + TP
Sbjct: 499 ----EGVLPEICDAHGRCLCRPGVEGPQCDACRSGFYSF--PICQACWCSALGSYQ-TP- 550
Query: 227 CDSVKGQCECKDNVEGAQC 245
C SV GQCEC+ V G +C
Sbjct: 551 CSSVTGQCECRPGVTGQRC 569
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 109/242 (45%), Gaps = 52/242 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS C+S G+C+C+PGVT
Sbjct: 510 GRCL-CRPGVEGPQCDACRSGFYSFP---ICQACWCSALGSYQTPCSSVTGQCECRPGVT 565
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG T N + QC ++H E
Sbjct: 566 GQRCDRCLSGAYDFPHCQGSSSACDPAG----TVNSNLEYCQC---------KLHVE--- 609
Query: 143 QSRKNFDPA----GNRIWDLRR----------CKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
P W+L + C + G G +C +G C CK
Sbjct: 610 ------GPTCSICKPLYWNLDKENPNGCSECQCHQAGTVSGTG-----ECRQGDGDCHCK 658
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
V GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G
Sbjct: 659 SHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSV--CSGASGVCQCREHVVGKA 716
Query: 245 CR 246
C+
Sbjct: 717 CQ 718
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ +G +C C P V G +C RC HY
Sbjct: 1253 NSARSLVAFYHKGA----LPCECHPAGATGPHCSPDGGQCPCWPNVIGRQCTRCATGHYG 1308
Query: 96 FGEAGCKSCECNPAGSVKNTPNCD----SVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
F C+ C C + T C +V+ QCE+ + S +F P
Sbjct: 1309 F--PYCRPCSCGQNLCEEMTGQCRCPPRTVRPQCEACETHSF-------------SFHPV 1353
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
+ C R G + L+C+ + G+C+CKP +TG +CDRC Y F E C
Sbjct: 1354 AG--CEACNCSRR----GTVEAAMLECDRDSGQCRCKPRITGQQCDRCASGFYRFPE--C 1405
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C CN G+ CD G C CK+NVEG +C
Sbjct: 1406 IPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1438
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 18/131 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1690 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCERCQEGYYGNAIHGSCRACPCP 1740
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKN 114
S C G +C CK G TG +C+RC ++ + C+ C CN G +
Sbjct: 1741 HTNSFATGCVVNGGNVQCSCKAGYTGTQCERCAPGYFGNPQKFRGSCQPCNCNSNGQLG- 1799
Query: 115 TPNCDSVKGQC 125
+CD + G C
Sbjct: 1800 --SCDPLTGDC 1808
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLN---LQCNSE-GRCQCKPGVTGDKCDRCDV 91
P CE C + + C ACNC+ G++ L+C+ + G+C+CKP +TG +CDRC
Sbjct: 1338 PQCEACETHSFSFHPVAGCEACNCSRRGTVEAAMLECDRDSGQCRCKPRITGQQCDRCAS 1397
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1398 GFYRFPE--CIPCNCNRDGTEPGV--CDPGTGAC 1427
>gi|224048172|ref|XP_002190601.1| PREDICTED: laminin subunit alpha-2 [Taeniopygia guttata]
Length = 3168
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 113/268 (42%), Gaps = 68/268 (25%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNCNP 61
N FS C FD+ G C +C GP CE+C + Y+ + C C CN
Sbjct: 850 NNFSPTCHFDRH------RGLMCDECPAGYVGPRCERCAEGYFGQPLIPGGSCQPCQCND 903
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+RC + FG+A C+ C C+
Sbjct: 904 ----NLDFSVPGSCDSLSGACLICKPGTTGQYCERCADGY--FGDALHARNCQPCHCHMN 957
Query: 110 GSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
GS CDS GQC+ A + R R + CK T+ L
Sbjct: 958 GSFSEI--CDSRTGQCKCKANVIGR-----------RCDI------------CKPGTFGL 992
Query: 169 GHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
GS + C+ +G+C C+PGVTG KCDRC Y+F E GC CEC+
Sbjct: 993 QSSRGCVPCNCNSFGSKSFDCDGDGQCYCQPGVTGKKCDRCAHGFYNFEEGGCTPCECSR 1052
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD V G+C C N G C
Sbjct: 1053 FGN-----NCDPVSGRCICPPNTVGEMC 1075
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 111/240 (46%), Gaps = 57/240 (23%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ + G C+ C+ + C CNCN GS + C+ +G+C C+PGVTG KCDR
Sbjct: 973 CKANVIGRRCDICKPGTFGLQSSRGCVPCNCNSFGSKSFDCDGDGQCYCQPGVTGKKCDR 1032
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C Y+F E GC CEC+ G+ NCD V G+C
Sbjct: 1033 CAHGFYNFEEGGCTPCECSRFGN-----NCDPVSGRCICPP------------------- 1068
Query: 149 DPAGNRIWDL-RRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
N + ++ +C + + GH G+L+ QC+ + G C C+P +G+
Sbjct: 1069 ----NTVGEMCDKCAPNHW--GHNIVSGCKPCECSLIGALSSQCDLNTGCCFCRPEFSGE 1122
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV--------KGQCECKDNVEGAQC 245
KC C + ++++ C +C+C AG+ + +CD+ GQC CK NVEG C
Sbjct: 1123 KCTECRLGYWNYPH--CLACQCLLAGT--DPQSCDAEGKCSCIDHSGQCSCKVNVEGVHC 1178
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+++ +R GG C++C G G NCE C D Y++ G
Sbjct: 376 CNCHGKTEECYYDQDVADRNQSLNIHGEFLGGGVCVNCSGYTSGINCETCLDGYFRPKGV 435
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
+ C C+C+P GSLN C + G C CK G G+ C+RC + + +
Sbjct: 436 LPENPDPCQPCSCDPNGSLNDTCVKDEKHTEGDLLPGFCHCKTGYAGESCNRCALGYTGY 495
Query: 97 GEAGCKSCECNPAGSVKNTP 116
E C C C+ GS + P
Sbjct: 496 PE--CLPCNCSLEGSENDDP 513
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 93/233 (39%), Gaps = 50/233 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTA 56
CNCN F ++ F G C CQ G C++C +Y NF CT
Sbjct: 1001 CNCNSFGSKSF-------DCDGDGQCY-CQPGVTGKKCDRCAHGFY-----NFEEGGCTP 1047
Query: 57 CNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKN 114
C C+ G+ C+ GRC C P G+ CD+C NH+ +GCK CEC+ G++ +
Sbjct: 1048 CECSRFGN---NCDPVSGRCICPPNTVGEMCDKCAPNHWGHNIVSGCKPCECSLIGALSS 1104
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
CD G C + G TE R+ W+ C L G+
Sbjct: 1105 --QCDLNTGCC-FCRPEFSGEKCTECRLG-----------YWNYPHCLACQCLLA--GTD 1148
Query: 175 NLQCNSEGRCQC---------KPGVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
C++EG+C C K V G CDRC + GC SC C
Sbjct: 1149 PQSCDAEGKCSCIDHSGQCSCKVNVEGVHCDRCKSGTFGLSARNPLGCSSCYC 1201
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 97/249 (38%), Gaps = 56/249 (22%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC-QCKPGVTG 83
+C DG +CE C + + +G F C C C G ++ + G C CK G
Sbjct: 759 ECPPGYDGTSCESCWPRHRRVNGTIFGGVCAPCTC--FGHADVCDDITGACLDCKHNTGG 816
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNCDSVKGQCESAQLSSRGRVH 137
CDRC Y G C+ C C P N +P C + RG +
Sbjct: 817 PYCDRCLPGFYGDATKGTAEDCQLCAC-PLNIPSNNFSPTCHFDR---------HRGLMC 866
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTY--PLGHGGS-------LNLQCNSEGRCQ--- 185
E PAG RC + PL GGS NL + G C
Sbjct: 867 DEC---------PAGYVGPRCERCAEGYFGQPLIPGGSCQPCQCNDNLDFSVPGSCDSLS 917
Query: 186 -----CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCEC 236
CKPG TG C+RC + FG+A C+ C C+ GS CDS GQC+C
Sbjct: 918 GACLICKPGTTGQYCERCADGY--FGDALHARNCQPCHCHMNGSFSEI--CDSRTGQCKC 973
Query: 237 KDNVEGAQC 245
K NV G +C
Sbjct: 974 KANVIGRRC 982
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
C C +G C++C Y Q G + C AC C+P GS+ + C+ G+C CKPG
Sbjct: 1529 CTACPPGYEGQYCQRCSSGYTGNPQIPGGS-CQACECDPHGSVPVPCDPVTGQCTCKPGF 1587
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCE 105
TG KC C+ H G C SC+
Sbjct: 1588 TGWKCAGCEHRHARHG-TRCISCD 1610
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 171 GGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVK 222
G + + C +EG RC C PG G C RC + C++CEC+P GSV
Sbjct: 1512 GNNFSPACIAEGPSDYRCTACPPGYEGQYCQRCSSGYTGNPQIPGGSCQACECDPHGSVP 1571
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
CD V GQC CK G +C
Sbjct: 1572 VP--CDPVTGQCTCKPGFTGWKC 1592
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G+ C+RC + + + E C C C S++ + N D G C CK++VE
Sbjct: 472 GFCHCKTGYAGESCNRCALGYTGYPE--CLPCNC----SLEGSENDDPCIGPCICKEHVE 525
Query: 242 GAQC 245
G C
Sbjct: 526 GENC 529
>gi|390353609|ref|XP_783877.3| PREDICTED: laminin subunit alpha-like [Strongylocentrotus
purpuratus]
Length = 1895
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 114/252 (45%), Gaps = 44/252 (17%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKC 86
+C+ + GP+C +C + YY G +C C+CN G+ N C G +C CKP TG C
Sbjct: 431 ECKPEYAGPDCTECNEGYY---GYPYCRPCDCNLNGTENKVCQVNGGQCPCKPNYTGRNC 487
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS--------------- 131
+ C +++Y F E C+ C+CN GS CDS GQC ++
Sbjct: 488 NLCALSYYGFPE--CQRCDCNTIGSFDIV--CDSENGQCSCREVYDGRSCDSCRDGHYNF 543
Query: 132 ------SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR---------DTYPLG--HGGSL 174
S +V TE V ++ N + + RC+R D P G GS
Sbjct: 544 PTCSDCSCSQVGTEEEVCNKTNGECLCGENFGGLRCERCSIGFYNYPDCLPCGCDDTGSF 603
Query: 175 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
N QC+ G+C C+ G KCD+C Y + C+ C C+ GS CD V GQC
Sbjct: 604 NGQCDDSGQCPCESNFAGLKCDQCAAGFYKY--PACEPCNCDRYGSFNVL--CDQVSGQC 659
Query: 235 ECKDNVEGAQCR 246
C+ N +G C+
Sbjct: 660 SCRPNFQGRMCQ 671
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 115/244 (47%), Gaps = 35/244 (14%)
Query: 13 DKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE 72
++E+ N+T G CL C + G CE+C +Y C C C+ GS N QC+
Sbjct: 557 EEEVCNKTN--GECL-CGENFGGLRCERCSIGFYNYPD---CLPCGCDDTGSFNGQCDDS 610
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C+ G KCD+C Y + C+ C C+ GS CD V GQC S + +
Sbjct: 611 GQCPCESNFAGLKCDQCAAGFYKY--PACEPCNCDRYGSFNVL--CDQVSGQC-SCRPNF 665
Query: 133 RGRVHTELRVQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC 184
+GR+ + +S N+ DPAG + D+ PLG GS ++ G C
Sbjct: 666 QGRMCQQCG-ESFYNYPNCEECNCDPAG--VIDV-----PGQPLGGCGS-----STGGAC 712
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
CK V G CD C +++ G + GC+ C CN AG+V CD GQC CK V
Sbjct: 713 LCKDNVMGRTCDTCKPLYWNLGISNPYGCEECNCNLAGTVGGMAICDIRTGQCFCKGQVT 772
Query: 242 GAQC 245
G C
Sbjct: 773 GRTC 776
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 116/261 (44%), Gaps = 37/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+ SN C +D+E+ G GG C +CQ + G NC C+ +Y+ G
Sbjct: 342 CNCHSHSNECVYDEEVALSRGSMDINGNMEGGGVCQNCQHNTVGVNCHLCKPGFYRPEGR 401
Query: 52 -----NFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C C+PI S G+C+CKP G C C+ +Y G C+ C+C
Sbjct: 402 KQSDYDVCQPCMCDPILSTGNCAPLTGQCECKPEYAGPDCTECNEGYY--GYPYCRPCDC 459
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
N G+ C GQC + + GR + L S F + +RC +T
Sbjct: 460 NLNGTENKV--CQVNGGQC-PCKPNYTGR-NCNLCALSYYGFP-------ECQRCDCNTI 508
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GS ++ C+SE G+C C+ G CD C HY+F C C C+ G+ +
Sbjct: 509 -----GSFDIVCDSENGQCSCREVYDGRSCDSCRDGHYNF--PTCSDCSCSQVGTEEEV- 560
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C+ G+C C +N G +C
Sbjct: 561 -CNKTNGECLCGENFGGLRCE 580
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 26/188 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ--------CNSEGRCQCKPG 80
C+ + G C++C +++Y C CNC+P G +++ ++ G C CK
Sbjct: 661 CRPNFQGRMCQQCGESFYNYPN---CEECNCDPAGVIDVPGQPLGGCGSSTGGACLCKDN 717
Query: 81 VTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRV 136
V G CD C +++ G + GC+ C CN AG+V CD GQC Q++ R
Sbjct: 718 VMGRTCDTCKPLYWNLGISNPYGCEECNCNLAGTVGGMAICDIRTGQCFCKGQVTGRTCA 777
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
+ +P G + C D GGS++ C++ G+C C+P VTG C
Sbjct: 778 ECRDGTYQLEASNPIG-----CQDCNCDV-----GGSVHAACDTRTGQCVCRPRVTGVTC 827
Query: 196 DRCDVNHY 203
D + NH+
Sbjct: 828 DMPEANHF 835
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 94/229 (41%), Gaps = 28/229 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C++C +Y+ C CNC+ GS N+ C+ G+C C+P G C
Sbjct: 615 CESNFAGLKCDQCAAGFYKYPA---CEPCNCDRYGSFNVLCDQVSGQCSCRPNFQGRMCQ 671
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C + Y++ C+ C C+PAG + V GQ SS G +
Sbjct: 672 QCGESFYNY--PNCEECNCDPAGVID-------VPGQPLGGCGSSTGGACLCKDNVMGRT 722
Query: 148 FDPAGNRIWDL--------RRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
D W+L C + G G + + G+C CK VTG C C
Sbjct: 723 CDTCKPLYWNLGISNPYGCEECNCNL--AGTVGGMAICDIRTGQCFCKGQVTGRTCAECR 780
Query: 200 VNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y + GC+ C C+ GSV CD+ GQC C+ V G C
Sbjct: 781 DGTYQLEASNPIGCQDCNCDVGGSVHAA--CDTRTGQCVCRPRVTGVTC 827
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 41/233 (17%)
Query: 32 DRDGPNCEKCR--DNYYQKSGDNFC---------------TACNCNPIGSLNLQCNSEG- 73
DR G + C D Y+ FC + C+C+ GSL+ C+ G
Sbjct: 1342 DRAGEFIQYCSANDFYFSPDSSGFCREAVFSLSSAFNYGASECDCDSQGSLSFNCDELGG 1401
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
+C C+ + G +C++C V +YDF C++C C C+ V G+C + +
Sbjct: 1402 QCNCRQNIVGRRCNKCAVGYYDF--PYCRACTCESG-------VCNEVSGECICPE--NV 1450
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
+ + + P I C+ D + + +L C+ G C CKP + G
Sbjct: 1451 AGTNCDTCAPQTYGYHP----IVGCVDCECDIRGVDNN---DLNCDFFTGECNCKPNIGG 1503
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+RC+ +Y G C+ C C+ G+ + CD QC CKDNV G QC
Sbjct: 1504 RQCERCERGNY--GYPYCEPCNCDVNGTTEEI--CDQTTAQCLCKDNVYGDQC 1552
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPG 80
G C C+G G C +CRD YQ N C CNC+ GS++ C++ G+C C+P
Sbjct: 763 GQCF-CKGQVTGRTCAECRDGTYQLEASNPIGCQDCNCDVGGSVHAACDTRTGQCVCRPR 821
Query: 81 VTGDKCDRCDVNHY 94
VTG CD + NH+
Sbjct: 822 VTGVTCDMPEANHF 835
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C C V G CD C Y + GC CEC+ G N NCD G+C CK N+
Sbjct: 1442 GECICPENVAGTNCDTCAPQTYGYHPIVGCVDCECDIRGVDNNDLNCDFFTGECNCKPNI 1501
Query: 241 EGAQCR 246
G QC
Sbjct: 1502 GGRQCE 1507
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 81/208 (38%), Gaps = 47/208 (22%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C +C+ + G C KC YY +C AC C + CN G C C V
Sbjct: 1400 GGQC-NCRQNIVGRRCNKCAVGYYDFP---YCRACTCE-----SGVCNEVSGECICPENV 1450
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G CD C Y + GC CEC+ G N NCD G+C
Sbjct: 1451 AGTNCDTCAPQTYGYHPIVGCVDCECDIRGVDNNDLNCDFFTGEC--------------- 1495
Query: 141 RVQSRKNFDP-AGNRIWDLRRCKRDTYPLGH--------GGSLNLQCN-SEGRCQCKPGV 190
N P G R RC+R Y + G+ C+ + +C CK V
Sbjct: 1496 ------NCKPNIGGR--QCERCERGNYGYPYCEPCNCDVNGTTEEICDQTTAQCLCKDNV 1547
Query: 191 TGDKCDRCDVNHYDFGEA---GCKSCEC 215
GD+C++C+ + ++ GC SC C
Sbjct: 1548 YGDQCNQCEPGTFYLADSNPEGCISCFC 1575
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGD-NFCTAC 57
CNCNG ++RC G CL+C + G CE C++ YY SGD + C C
Sbjct: 1807 CNCNGHASRC---------DSKTGQCLECDHNTVGDQCESCKEGYYGDAPSGDPDACKIC 1857
Query: 58 NC-NPIGSLNLQCN------SEGRCQCKPGVTGDKCDR 88
+C PI + N + C C+PG TG CD+
Sbjct: 1858 SCPQPIENQNFAVTCTFSPQGDQFCICQPGHTGQYCDQ 1895
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVE 241
RC+C P G C+ C HY +G +C P + CDS GQC EC N
Sbjct: 1772 RCRCPPQYQGLSCELCAEGHYRLPGSGPYLGQCVPCNCNGHASRCDSKTGQCLECDHNTV 1831
Query: 242 GAQCRS 247
G QC S
Sbjct: 1832 GDQCES 1837
>gi|156400070|ref|XP_001638823.1| predicted protein [Nematostella vectensis]
gi|156225947|gb|EDO46760.1| predicted protein [Nematostella vectensis]
Length = 3129
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 130/272 (47%), Gaps = 37/272 (13%)
Query: 1 CNCNGFSNRCFFDKEL----YNRT-GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCT 55
C CN + C+++ L +RT G GG C++C + G C CRD+++++ G +
Sbjct: 562 CECNNHATACYYNSSLDPSPASRTVGGGGVCINCLHNTAGQFCHVCRDDFFREPGKSLSA 621
Query: 56 ACNCNP-------IGSLNLQCNSE--------GRCQCKPGVTGDKCDRCDVNHYDFGEA- 99
C+P + + C + G+C+CK G +CD C YD +
Sbjct: 622 VDVCSPCQCTGPGVETGKTSCARDDSTPGVIAGQCECKQYTQGRQCDACKPGFYDLKSSH 681
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIW 156
GC +C CN AG+V +CD +GQC + ++ R E ++ DP+G
Sbjct: 682 STGCVTCGCNTAGTVNRNASCDQSRGQCYCKSNVTGRTCDTCESGFYGLRDNDPSG---- 737
Query: 157 DLRRCKRDTYPLGH-GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
R C+ D P G GS+ C++ G+C+CK G TG +C C+ ++ +GCK+C
Sbjct: 738 -CRACECD--PFGTLPGSV---CDAGSGQCRCKAGSTGLRCHLCEDGYHSLDSSGCKTCN 791
Query: 215 CNPAGSVKNTPN-CDSVKGQCECKDNVEGAQC 245
C+ G+ N CD GQC CK VEG C
Sbjct: 792 CSTIGAKPGLVNTCDKTNGQCYCKTYVEGKTC 823
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 111/236 (47%), Gaps = 39/236 (16%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNP--IGSLNLQCN-SEGRCQCKPGVTG 83
C+ +G C++C+ YY + N C+ C+C+P I +L C S G C CK V
Sbjct: 814 CKTYVEGKTCDRCKTGYYNLTTVNQDGCSLCSCDPKGIQGSSLTCEVSSGNCTCKKYVRE 873
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSV--KNTPNCDSVKGQCESAQLSSRGRVHT 138
C +C +++ + GC++C CNP G++ TP G+ E + S G+
Sbjct: 874 PTCGQCMKGYFNLSSSNPEGCQACNCNPKGTLGGDRTP-----AGELECS--GSNGKCAC 926
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNLQCNSEGRCQCKPG 189
VQ + W+ P G+G GSL CNS G CQCKP
Sbjct: 927 LTNVQGLRCDQCVSAYYWN---------PSGYGCSPCNCDASGSLATNCNSTGYCQCKPN 977
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G +CDRC Y G CK C CN AGS+ +T CD G+C CK NV+G +C
Sbjct: 978 IGGRRCDRCMPGSYG-GPGSCKPCNCNMAGSLSDT--CDD-SGKCNCKPNVQGDKC 1029
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 20 TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
+G G C C + G C++C YY C+ CNC+ GSL CNS G CQCKP
Sbjct: 918 SGSNGKC-ACLTNVQGLRCDQCVSAYYWNPSGYGCSPCNCDASGSLATNCNSTGYCQCKP 976
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
+ G +CDRC Y G CK C CN AGS+ +T
Sbjct: 977 NIGGRRCDRCMPGSYG-GPGSCKPCNCNMAGSLSDT 1011
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQC--NSEGRCQCKPGVTGD 84
C+ + G C+ C +Y + + + C AC C+P G+L G+C+CK G TG
Sbjct: 711 CKSNVTGRTCDTCESGFYGLRDNDPSGCRACECDPFGTLPGSVCDAGSGQCRCKAGSTGL 770
Query: 85 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQCESAQLSSRGRVHTELRVQ 143
+C C+ ++ +GCK+C C+ G+ N CD GQC + + V+
Sbjct: 771 RCHLCEDGYHSLDSSGCKTCNCSTIGAKPGLVNTCDKTNGQC-----------YCKTYVE 819
Query: 144 SRKNFDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCD 196
K D ++L +D P G GS +L C S G C CK V C
Sbjct: 820 G-KTCDRCKTGYYNLTTVNQDGCSLCSCDPKGIQGS-SLTCEVSSGNCTCKKYVREPTCG 877
Query: 197 RCDVNHYDFGEA---GCKSCECNPAGSV--KNTP----NCDSVKGQCECKDNVEGAQC 245
+C +++ + GC++C CNP G++ TP C G+C C NV+G +C
Sbjct: 878 QCMKGYFNLSSSNPEGCQACNCNPKGTLGGDRTPAGELECSGSNGKCACLTNVQGLRC 935
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 101/223 (45%), Gaps = 58/223 (26%)
Query: 36 PNCEKCRDNYYQKSGDNF--CTACNCNPIGSL--------NLQCN-SEGRCQCKPGVTGD 84
P C +C Y+ S N C ACNCNP G+L L+C+ S G+C C V G
Sbjct: 874 PTCGQCMKGYFNLSSSNPEGCQACNCNPKGTLGGDRTPAGELECSGSNGKCACLTNVQGL 933
Query: 85 KCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+CD+C V+ Y + +G C C C+ +GS+ NC+S G C
Sbjct: 934 RCDQC-VSAYYWNPSGYGCSPCNCDASGSLAT--NCNS-TGYC----------------- 972
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------GSLNLQCNSEGRCQCKPGVTG 192
Q + N G R D RC +Y G G GSL+ C+ G+C CKP V G
Sbjct: 973 QCKPNI---GGRRCD--RCMPGSYG-GPGSCKPCNCNMAGSLSDTCDDSGKCNCKPNVQG 1026
Query: 193 DKCDRC-------DVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
DKCD C VN+ DFG +G S + P +V ++ D
Sbjct: 1027 DKCDTCKDGTQNLQVNN-DFGCSGVPSQQPAPVITVSSSRRLD 1068
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G+C C+ + G C++C Y G C CNCN GSL+ C+ G+C CKP V G
Sbjct: 970 GYC-QCKPNIGGRRCDRCMPGSYGGPGS--CKPCNCNMAGSLSDTCDDSGKCNCKPNVQG 1026
Query: 84 DKCDRC-------DVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
DKCD C VN+ DFG +G S + P +V ++ D
Sbjct: 1027 DKCDTCKDGTQNLQVNN-DFGCSGVPSQQPAPVITVSSSRRLD 1068
>gi|353560722|gb|AER12035.1| laminin alpha 2 chain short splice variant [Danio rerio]
Length = 3078
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 101/209 (48%), Gaps = 44/209 (21%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C C+CN GS + C+ G+C+C+PGVTG KCDRC H+ F E GC C+C G+
Sbjct: 948 CVPCHCNSFGSKSFDCDESGQCRCQPGVTGQKCDRCAAGHFSFQEGGCTPCQCAHVGN-- 1005
Query: 114 NTPNCDSVKGQ--CESAQLSSRGRVHTELRVQSRKNFDPAGNRIW--DLRR-CKRDTYPL 168
NCD+ GQ C + R D W D+ CK P
Sbjct: 1006 ---NCDASTGQCICPPNTVGER--------------CDKCAPNHWGHDISTGCK----PC 1044
Query: 169 G--HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G GS+ QCN + G C C+ G+KCD C + + DF + C SC+C+ AGS +T
Sbjct: 1045 GCNALGSVAQQCNLNTGCCMCREQFRGEKCDECKLGYRDFPQ--CISCQCSAAGSSLDT- 1101
Query: 226 NCDSVK---------GQCECKDNVEGAQC 245
CDS GQC CK NVEG +C
Sbjct: 1102 -CDSESGLCACADRSGQCSCKANVEGQKC 1129
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 101/236 (42%), Gaps = 44/236 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C+ G +CE+C D Y+ GD C AC C+ GS++ C+ E G+CQC+
Sbjct: 869 GACLRCRKGYGGADCERCADGYF---GDALIAKNCQACQCHSNGSVSELCHQETGQCQCR 925
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G +CD C + G GC C CN GS + +CD GQC
Sbjct: 926 QHVIGRQCDECMAGSHLQGALGCVPCHCNSFGS--KSFDCDE-SGQC------------- 969
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGV 190
R Q G RC + GG QC S G+C C P
Sbjct: 970 --RCQP-------GVTGQKCDRCAAGHFSFQEGGCTPCQCAHVGNNCDASTGQCICPPNT 1020
Query: 191 TGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++CD+C NH+ GCK C CN GSV C+ G C C++ G +C
Sbjct: 1021 VGERCDKCAPNHWGHDISTGCKPCGCNALGSVAQ--QCNLNTGCCMCREQFRGEKC 1074
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 115/276 (41%), Gaps = 68/276 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C C+G + RC GHCL C+ GPNC +C YY + + C C
Sbjct: 742 CQCHGHTERC---------DDLTGHCLGCRDHTVGPNCGQCAPGYYGDATRGTADDCQPC 792
Query: 58 NC---NPIGSLNLQCNSEGRCQ-----CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP- 108
C +P + + C +GR + C PG TG +CDRC N Y FG C P
Sbjct: 793 ACPLLSPANNFSPTCRVDGRGEVICDRCPPGYTGSRCDRCS-NGY-FGRPNIPGGSCQPC 850
Query: 109 --AGSVKNTP--NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
+G++ T +CD + G C ++ RK + A D RC D
Sbjct: 851 VCSGNLDQTAPLSCDPLTGAC----------------LRCRKGYGGA-----DCERCA-D 888
Query: 165 TYPLGHG--------------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG 209
Y G GS++ C+ E G+CQC+ V G +CD C + G G
Sbjct: 889 GY-FGDALIAKNCQACQCHSNGSVSELCHQETGQCQCRQHVIGRQCDECMAGSHLQGALG 947
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C CN GS + +CD GQC C+ V G +C
Sbjct: 948 CVPCHCNSFGS--KSFDCDE-SGQCRCQPGVTGQKC 980
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+ S C++++ + N G GG CL C + G NC+ C D +Y+ SG
Sbjct: 329 CNCHNKSEECYYNQTVADAKLSLNIHGEYEGGGVCLGCSENTGGINCQSCIDGFYRPSGV 388
Query: 52 N-----FCTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
+ CT C C+ G+L+ C + G C CKPG G++CDRC + F
Sbjct: 389 SPLEPWPCTPCTCDLRGALHSTCVPDESQATTDLPVGSCICKPGYAGERCDRCVFGYAGF 448
Query: 97 GEAGCKSCECNPAGSVKNTP 116
+ C+ C C+ GSV P
Sbjct: 449 PQ--CERCRCSSDGSVNQDP 466
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C+KC N++ C C CN +GS+ QCN + G C C+
Sbjct: 1012 GQCI-CPPNTVGERCDKCAPNHWGHDISTGCKPCGCNALGSVAQQCNLNTGCCMCREQFR 1070
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G+KCD C + + DF + C SC+C+ AGS +T CDS G C
Sbjct: 1071 GEKCDECKLGYRDFPQ--CISCQCSAAGSSLDT--CDSESGLC 1109
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG G++CDRC + F + C+ C C+ GSV N D + C CK++VE
Sbjct: 425 GSCICKPGYAGERCDRCVFGYAGFPQ--CERCRCSSDGSV----NQDPCQPPCVCKEHVE 478
Query: 242 GAQC 245
G C
Sbjct: 479 GRDC 482
>gi|353560720|gb|AER12034.1| laminin alpha 2 chain [Danio rerio]
Length = 3124
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 101/209 (48%), Gaps = 44/209 (21%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C C+CN GS + C+ G+C+C+PGVTG KCDRC H+ F E GC C+C G+
Sbjct: 948 CVPCHCNSFGSKSFDCDESGQCRCQPGVTGQKCDRCAAGHFSFQEGGCTPCQCAHVGN-- 1005
Query: 114 NTPNCDSVKGQ--CESAQLSSRGRVHTELRVQSRKNFDPAGNRIW--DLRR-CKRDTYPL 168
NCD+ GQ C + R D W D+ CK P
Sbjct: 1006 ---NCDASTGQCICPPNTVGER--------------CDKCAPNHWGHDISTGCK----PC 1044
Query: 169 G--HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G GS+ QCN + G C C+ G+KCD C + + DF + C SC+C+ AGS +T
Sbjct: 1045 GCNALGSVAQQCNLNTGCCMCREQFRGEKCDECKLGYRDFPQ--CISCQCSAAGSSLDT- 1101
Query: 226 NCDSVKG---------QCECKDNVEGAQC 245
CDS G QC CK NVEG +C
Sbjct: 1102 -CDSESGLCACADRSGQCSCKANVEGQKC 1129
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 101/236 (42%), Gaps = 44/236 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C+ G +CE+C D Y+ GD C AC C+ GS++ C+ E G+CQC+
Sbjct: 869 GACLRCRKGYGGADCERCADGYF---GDALIAKNCQACQCHSNGSVSELCHQETGQCQCR 925
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G +CD C + G GC C CN GS + +CD GQC
Sbjct: 926 QHVIGRQCDECMAGSHLQGALGCVPCHCNSFGS--KSFDCDE-SGQC------------- 969
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGV 190
R Q G RC + GG QC S G+C C P
Sbjct: 970 --RCQP-------GVTGQKCDRCAAGHFSFQEGGCTPCQCAHVGNNCDASTGQCICPPNT 1020
Query: 191 TGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++CD+C NH+ GCK C CN GSV C+ G C C++ G +C
Sbjct: 1021 VGERCDKCAPNHWGHDISTGCKPCGCNALGSVAQ--QCNLNTGCCMCREQFRGEKC 1074
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 115/276 (41%), Gaps = 68/276 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C C+G + RC GHCL C+ GPNC +C YY + + C C
Sbjct: 742 CQCHGHTERC---------DDLTGHCLGCRDHTVGPNCGQCAPGYYGDATRGTADDCQPC 792
Query: 58 NC---NPIGSLNLQCNSEGRCQ-----CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP- 108
C +P + + C +GR + C PG TG +CDRC N Y FG C P
Sbjct: 793 ACPLLSPANNFSPTCRVDGRGEVICDRCPPGYTGSRCDRCS-NGY-FGRPNIPGGSCQPC 850
Query: 109 --AGSVKNTP--NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
+G++ T +CD + G C ++ RK + A D RC D
Sbjct: 851 VCSGNLDQTAPLSCDPLTGAC----------------LRCRKGYGGA-----DCERCA-D 888
Query: 165 TYPLGHG--------------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG 209
Y G GS++ C+ E G+CQC+ V G +CD C + G G
Sbjct: 889 GY-FGDALIAKNCQACQCHSNGSVSELCHQETGQCQCRQHVIGRQCDECMAGSHLQGALG 947
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C CN GS + +CD GQC C+ V G +C
Sbjct: 948 CVPCHCNSFGS--KSFDCDE-SGQCRCQPGVTGQKC 980
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+ S C++++ + N G GG CL C + G NC+ C D +Y+ SG
Sbjct: 329 CNCHNKSEECYYNQTVADAKLSLNIHGEYEGGGVCLGCSENTGGINCQSCIDGFYRPSGV 388
Query: 52 N-----FCTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
+ CT C C+ G+L+ C + G C CKPG G++CDRC + F
Sbjct: 389 SPLEPWPCTPCTCDLRGALHSTCVPDESQATTDLPVGSCICKPGYAGERCDRCVFGYAGF 448
Query: 97 GEAGCKSCECNPAGSVKNTP 116
+ C+ C C+ GSV P
Sbjct: 449 PQ--CERCRCSSDGSVNQDP 466
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C+KC N++ C C CN +GS+ QCN + G C C+
Sbjct: 1012 GQCI-CPPNTVGERCDKCAPNHWGHDISTGCKPCGCNALGSVAQQCNLNTGCCMCREQFR 1070
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G+KCD C + + DF + C SC+C+ AGS +T CDS G C
Sbjct: 1071 GEKCDECKLGYRDFPQ--CISCQCSAAGSSLDT--CDSESGLC 1109
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
C C +G +CE+C ++ G C C C+P G+ C+S G+CQC+PG +
Sbjct: 1471 CTACPEGYEGKHCERCAPGFHGDPGVLGGRCEECKCDPYGAFPSACDSHSGQCQCRPGAS 1530
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
G KCD+C H G G SC+ + AG +
Sbjct: 1531 GLKCDQCMERHV-CGPEGIVSCDDDCAGLL 1559
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG G++CDRC + F + C+ C C+ GSV N D + C CK++VE
Sbjct: 425 GSCICKPGYAGERCDRCVFGYAGFPQ--CERCRCSSDGSV----NQDPCQPPCVCKEHVE 478
Query: 242 GAQC 245
G C
Sbjct: 479 GRDC 482
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 24/139 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ + G CE+C +Y + + C C
Sbjct: 1397 CQCNGHSDSCDPETSI---------CQNCQHNTVGDKCERCAAGFYGVVRGFTDDCKPCA 1447
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVN-HYDFGEAG--CKSCECN 107
C NP + + C +EG RC C G G C+RC H D G G C+ C+C+
Sbjct: 1448 CPLLNPENNFSPTCQTEGFNEYRCTACPEGYEGKHCERCAPGFHGDPGVLGGRCEECKCD 1507
Query: 108 PAGSVKNTPNCDSVKGQCE 126
P G+ + CDS GQC+
Sbjct: 1508 PYGAFPSA--CDSHSGQCQ 1524
Score = 36.6 bits (83), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 178 CNSEG----RCQ-CKPGVTGDKCDRCDVN-HYDFGEAG--CKSCECNPAGSVKNTPNCDS 229
C +EG RC C G G C+RC H D G G C+ C+C+P G+ + CDS
Sbjct: 1461 CQTEGFNEYRCTACPEGYEGKHCERCAPGFHGDPGVLGGRCEECKCDPYGAFPSA--CDS 1518
Query: 230 VKGQCECKDNVEGAQC 245
GQC+C+ G +C
Sbjct: 1519 HSGQCQCRPGASGLKC 1534
>gi|296222397|ref|XP_002757169.1| PREDICTED: laminin subunit alpha-3 isoform 1 [Callithrix jacchus]
Length = 3336
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 113/259 (43%), Gaps = 62/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 359 CNCHGHTSDCYYDPDVEQQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 418
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CK GD C++C V +Y+F C
Sbjct: 419 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKLNFHGDNCEKCAVGYYNF-----PFCLR 472
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P + + D V G D++ C +
Sbjct: 473 IPIFPISTPSSEDPVAG---------------------------------DIKGCDCNL- 498
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G L C++ GRC C+PGV G +CD C Y F C++C C+ GS + TP
Sbjct: 499 ----EGVLPEICDAHGRCLCRPGVEGPQCDACRSGFYSF--PICQACWCSALGSYQ-TP- 550
Query: 227 CDSVKGQCECKDNVEGAQC 245
C SV GQCEC+ V G +C
Sbjct: 551 CSSVTGQCECRPGVTGQRC 569
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 109/242 (45%), Gaps = 52/242 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS C+S G+C+C+PGVT
Sbjct: 510 GRCL-CRPGVEGPQCDACRSGFYSFP---ICQACWCSALGSYQTPCSSVTGQCECRPGVT 565
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG T N + QC ++H E
Sbjct: 566 GQRCDRCLSGAYDFPHCQGSSSACDPAG----TVNSNLEYCQC---------KLHVE--- 609
Query: 143 QSRKNFDPA----GNRIWDLRR----------CKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
P W+L + C + G G +C +G C CK
Sbjct: 610 ------GPTCSICKPLYWNLDKENPNGCSECQCHQAGTVSGTG-----ECRQGDGDCHCK 658
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
V GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G
Sbjct: 659 SHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSV--CSGASGVCQCREHVVGKA 716
Query: 245 CR 246
C+
Sbjct: 717 CQ 718
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 90/225 (40%), Gaps = 55/225 (24%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ +G +C C P V G +C RC HY
Sbjct: 1253 NSARSLVAFYHKGA----LPCECHPAGATGPHCSPDGGQCPCWPNVIGRQCTRCATGHYG 1308
Query: 96 FGEAGCKSCECNPAGSVKNTPNCD----SVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
F C+ C C + T C +V+ QCE+ + S +F P
Sbjct: 1309 F--PYCRPCSCGQNLCEEMTGQCRCPPRTVRPQCEACETHSF-------------SFHPV 1353
Query: 152 -----------GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
G + C RD+ G+C+CKP +TG +CDRC
Sbjct: 1354 AGCEACNCSRRGTVEAAMLECDRDS----------------GQCRCKPRITGQQCDRCAS 1397
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F E C C CN G+ CD G C CK+NVEG +C
Sbjct: 1398 GFYRFPE--CIPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1438
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 18/131 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1690 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCERCQEGYYGNAIHGSCRACPCP 1740
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKN 114
S C G +C CK G TG +C+RC ++ + C+ C CN G +
Sbjct: 1741 HTNSFATGCVVNGGNVQCSCKAGYTGTQCERCAPGYFGNPQKFRGSCQPCNCNSNGQLG- 1799
Query: 115 TPNCDSVKGQC 125
+CD + G C
Sbjct: 1800 --SCDPLTGDC 1808
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLN---LQCNSE-GRCQCKPGVTGDKCDRCDV 91
P CE C + + C ACNC+ G++ L+C+ + G+C+CKP +TG +CDRC
Sbjct: 1338 PQCEACETHSFSFHPVAGCEACNCSRRGTVEAAMLECDRDSGQCRCKPRITGQQCDRCAS 1397
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1398 GFYRFPE--CIPCNCNRDGTEPGV--CDPGTGAC 1427
>gi|260793577|ref|XP_002591788.1| hypothetical protein BRAFLDRAFT_83576 [Branchiostoma floridae]
gi|229276998|gb|EEN47799.1| hypothetical protein BRAFLDRAFT_83576 [Branchiostoma floridae]
Length = 2142
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 33/263 (12%)
Query: 1 CNCNGFSNRCFFDKELY-NRTGH--------GGHCLDCQGDRDGPNCEKCRDNYYQ---- 47
CNC G S C++D E+ NR GG C++CQ + +G NCE+C+ +++
Sbjct: 329 CNCLGHSTECYYDPEVAQNRLSLDMRGDFNGGGVCINCQHNTEGINCERCKPGFFRVPDT 388
Query: 48 -KSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C +C CN + GRC C PG GD C++C G G +C+
Sbjct: 389 PLTSPYVCQSCQCNSFFTTGTCEQLTGRCYCLPGYAGDDCNQCAS-----GYVGFPNCKA 443
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR-VQSRKNFDPAGNRIWDLRRCKRDT 165
K+ PN ++ ++++ +++ + VQ +D + L C +
Sbjct: 444 LLVKKTKSRPNPEAEVFIPLTSEIVDIPPPYSQPKVVQPTPGYDGGYSAYGLLCECHMN- 502
Query: 166 YPLGHGGSLNLQCNSE--GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
G+ C+ E G+C CK G C+ C + +Y+F E C C+C+ AGS+ +
Sbjct: 503 ------GTAGFTCSVEGDGQCPCKYNYAGRYCEGCALGYYNFPE--CLPCQCDEAGSLSH 554
Query: 224 TPNCDSVKGQCECKDNVEGAQCR 246
CD +GQCEC+ G C
Sbjct: 555 --RCDIQQGQCECRSGFMGRTCE 575
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 109/243 (44%), Gaps = 32/243 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSE-------- 72
G C+DCQ G C+KC YY ++ + C C C P+ + + SE
Sbjct: 1834 GACIDCQHHTMGERCDKCMTGYYGEPRRGTPDDCQICAC-PMATEDNNFASECQPLAGGQ 1892
Query: 73 GRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECN-----PAGSVKNTPNCDSVKGQ 124
+C C PG G CDRC + Y E G C+ C+C+ +KN CD+ GQ
Sbjct: 1893 FQCTCLPGYDGPNCDRCAIGFYGKPSEVGGFCQRCDCSGNVRLTKVGMKNVEQCDAETGQ 1952
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
C ++ GR + F + +C+ G++ C+ + G+
Sbjct: 1953 CVDCLDNTGGRNCQ----KCAAGFYGDAIKTRSCSKCRN----CDVCGTVPDVCDDKTGK 2004
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C+ V GD CD+C+ NHY F GC++C+C+ GS+ + C GQC CK V G
Sbjct: 2005 CLCRDHVVGDNCDQCEENHYGFDSCQGCQACDCSADGSLAKS--CHPKTGQCTCKPGVTG 2062
Query: 243 AQC 245
+C
Sbjct: 2063 RRC 2065
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G CL C+ G NC++C +N+Y C AC+C+ GSL C+ + G+C CKPGVT
Sbjct: 2003 GKCL-CRDHVVGDNCDQCEENHYGFDSCQGCQACDCSADGSLAKSCHPKTGQCTCKPGVT 2061
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +CDRC+ H +F +GC++C C G CD G+C
Sbjct: 2062 GRRCDRCEAKHSNFTSSGCRACNCPKDGP------CDPQTGEC 2098
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 96/234 (41%), Gaps = 33/234 (14%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C+ G CE+C YY CT+C+CN +G+ C+++ G C C+ TG +C
Sbjct: 564 ECRSGFMGRTCERCATGYYNYPR---CTSCDCNVMGATQEVCDADTGTCLCREPFTGPRC 620
Query: 87 DRCDVNHYDF-----------GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
D+C Y F G +C C GS+ + +CD GQC R +
Sbjct: 621 DQCKSGSYSFPNCIRCNCYGAGVLDDDTCSCEAGGSIGS--DCDPRSGQC-------RCK 671
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E R N + ++ C + P G C CK V G
Sbjct: 672 EHVEGR-----NCNKCQVGFFNFPNCLECNCNPAGRAPDTECPSVQTMTCDCKSLVEGPA 726
Query: 195 CDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD+C +++ + GC+ C C G+ CD GQC CK NV+G C
Sbjct: 727 CDQCKPLYWNLLKDRPEGCEECGCFRPGTSSGLGTCDMAIGQCACKANVQGRIC 780
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 95/220 (43%), Gaps = 30/220 (13%)
Query: 32 DRD-GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRC 89
DRD P C K + D T CNCNP GS + C+ G +C CK + G CD C
Sbjct: 1375 DRDLTPFCRKSIMSLSAHYNDG-ATPCNCNPRGSSSQTCSPLGGQCPCKNNIVGRSCDVC 1433
Query: 90 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD 149
++ F + C++C C CD V G+C S R E V +
Sbjct: 1434 ATGYFGFPD--CRACPCG------ENRLCDPVTGECICPPRSRR----PECTVCEEGTY- 1480
Query: 150 PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS----EGRCQCKPGVTGDKCDRCDVNHYDF 205
+ + C D G L+L S G+C CKP V G +CDRC +Y+F
Sbjct: 1481 -GYHPLLGCEPCDCDAM-----GILDLNYPSCNRNTGQCSCKPNVGGRRCDRCLPGYYNF 1534
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C C+ G ++ CD G+C CK NV+G +C
Sbjct: 1535 --PYCSPCSCSADGVTEDV--CDQRTGRCLCKTNVDGVRC 1570
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 107/238 (44%), Gaps = 42/238 (17%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCN------PIGSLNL-QCNSE-GRC-QC 77
C DGPNC++C +Y K + FC C+C+ +G N+ QC++E G+C C
Sbjct: 1897 CLPGYDGPNCDRCAIGFYGKPSEVGGFCQRCDCSGNVRLTKVGMKNVEQCDAETGQCVDC 1956
Query: 78 KPGVTGDKCDRCDVNHY--DFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
G C +C Y C C C+ G+V + CD G+C R
Sbjct: 1957 LDNTGGRNCQKCAAGFYGDAIKTRSCSKCRNCDVCGTVPDV--CDDKTGKC-----LCRD 2009
Query: 135 RVHTELRVQSRKN---FDP-AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPG 189
V + Q +N FD G + D C D GSL C+ + G+C CKPG
Sbjct: 2010 HVVGDNCDQCEENHYGFDSCQGCQACD---CSAD-------GSLAKSCHPKTGQCTCKPG 2059
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
VTG +CDRC+ H +F +GC++C C G CD G+C C + + G C S
Sbjct: 2060 VTGRRCDRCEAKHSNFTSSGCRACNCPKDGP------CDPQTGECRCPEGLTGTDCES 2111
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 41/244 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCT----------ACNCNPIGSLNLQCNS-E 72
G CL C+ GP C++C+ Y C C+C GS+ C+
Sbjct: 607 GTCL-CREPFTGPRCDQCKSGSYSFPNCIRCNCYGAGVLDDDTCSCEAGGSIGSDCDPRS 665
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT--PNCDSVKGQCESAQL 130
G+C+CK V G C++C V ++F C C CNPAG +T P+ ++ C+S
Sbjct: 666 GQCRCKEHVEGRNCNKCQVGFFNF--PNCLECNCNPAGRAPDTECPSVQTMTCDCKS--- 720
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRC 184
+ D W+L + + + + G L + G+C
Sbjct: 721 -----------LVEGPACDQCKPLYWNLLKDRPEGCEECGCFRPGTSSGLGTCDMAIGQC 769
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
CK V G C C + E GC+ C C+ G+V + CD GQC C++ +E
Sbjct: 770 ACKANVQGRICMDCRDGSFGMSEVDSLGCQGCSCDVGGAVTDV--CDKATGQCVCREGME 827
Query: 242 GAQC 245
G QC
Sbjct: 828 GRQC 831
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 27/194 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTAC-NCNPIGSLNLQCNSE-GRCQC 77
G C+DC + G NC+KC +Y GD C+ C NC+ G++ C+ + G+C C
Sbjct: 1951 GQCVDCLDNTGGRNCQKCAAGFY---GDAIKTRSCSKCRNCDVCGTVPDVCDDKTGKCLC 2007
Query: 78 KPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
+ V GD CD+C+ NHY F GC++C+C+ GS+ + C GQC + + GR
Sbjct: 2008 RDHVVGDNCDQCEENHYGFDSCQGCQACDCSADGSLAKS--CHPKTGQC-TCKPGVTGRR 2064
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
+ NF +G R + C +D G + Q G C+C G+TG C+
Sbjct: 2065 CDRCEAK-HSNFTSSGCRACN---CPKD-------GPCDPQ---TGECRCPEGLTGTDCE 2110
Query: 197 RCDVNHYDFGEAGC 210
C + GC
Sbjct: 2111 SCKNETLLYTPRGC 2124
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 23/177 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQCNS--EGRCQCKPGVTG 83
C+ +G NC KC+ ++ NF C CNCNP G + + +C S C CK V G
Sbjct: 670 CKEHVEGRNCNKCQVGFF-----NFPNCLECNCNPAGRAPDTECPSVQTMTCDCKSLVEG 724
Query: 84 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
CD+C +++ + GC+ C C G+ CD GQC + + + +GR+ +
Sbjct: 725 PACDQCKPLYWNLLKDRPEGCEECGCFRPGTSSGLGTCDMAIGQC-ACKANVQGRICMDC 783
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCD 196
R S F + + C D GG++ C+ + G+C C+ G+ G +CD
Sbjct: 784 RDGS---FGMSEVDSLGCQGCSCDV-----GGAVTDVCDKATGQCVCREGMEGRQCD 832
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 61/158 (38%), Gaps = 12/158 (7%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ + G C++C YY +C+ C+C+ G C+ GRC CK V G +CD
Sbjct: 1515 CKPNVGGRRCDRCLPGYYNFP---YCSPCSCSADGVTEDVCDQRTGRCLCKTNVDGVRCD 1571
Query: 88 RCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
+C N Y GC SC C A TP C S V ++ +
Sbjct: 1572 QCKANTYHLSARNPEGCHSCFCFGA-----TPYCRSSDLHYTELLDMEDWTVSNQVGSEV 1626
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG 182
+ D ++ +L + Y + G L S G
Sbjct: 1627 MRFNDKVEVKLGELIQPDEPVYWVAPGIYLGNLVTSYG 1664
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 85/221 (38%), Gaps = 48/221 (21%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ + G +C+ C Y+ G C AC C G L G C C P
Sbjct: 1416 GGQC-PCKNNIVGRSCDVCATGYF---GFPDCRACPC---GENRLCDPVTGECICPPRSR 1468
Query: 83 GDKCDRCDVNHYDFGEA-GCKSCECNPAGSV-KNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+C C+ Y + GC+ C+C+ G + N P+C+ GQC S + V
Sbjct: 1469 RPECTVCEEGTYGYHPLLGCEPCDCDAMGILDLNYPSCNRNTGQC-----SCKPNV---- 1519
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGH---------GGSLNLQCNSEGRCQCKPGVT 191
G R D RC Y + G + ++ GRC CK V
Sbjct: 1520 -----------GGRRCD--RCLPGYYNFPYCSPCSCSADGVTEDVCDQRTGRCLCKTNVD 1566
Query: 192 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDS 229
G +CD+C N Y GC SC C A TP C S
Sbjct: 1567 GVRCDQCKANTYHLSARNPEGCHSCFCFGA-----TPYCRS 1602
>gi|260830543|ref|XP_002610220.1| hypothetical protein BRAFLDRAFT_76999 [Branchiostoma floridae]
gi|229295584|gb|EEN66230.1| hypothetical protein BRAFLDRAFT_76999 [Branchiostoma floridae]
Length = 2571
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 33/264 (12%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD---- 51
C C G ++ C ++ L + +G GG C DCQ + G C+ C D +Y++ G
Sbjct: 654 CECYGHADSCHYNASLDPFPNIHLSGGGGVCDDCQHNTIGRRCDTCADEFYREIGKPLDA 713
Query: 52 -NFCTACNCNPIGSL-NLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCE 105
+ CT C+CN G +L C+ G +C CK V G +CD+C +++ + GC++C
Sbjct: 714 VDVCTPCDCNVSGVDGSLVCDKIGGQCACKAQVDGRQCDQCRAGYFNLTQTNPDGCENCS 773
Query: 106 CNPAGSVKNTPNCDSVKGQC--ESAQLSSR-GRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
CN AG+ CD GQC ++ ++ + R ++ + N PAG C+
Sbjct: 774 CNLAGTAGGDSTCDD-DGQCNCKANVINLKCDRCDYGFKLLTASN--PAG-----CEPCQ 825
Query: 163 RDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+TY GS + CN + G+CQCK V G CD C + Y GCK+C CN G+
Sbjct: 826 CNTY-----GSTSQFCNPDTGQCQCKTNVEGLLCDTCVDDFYGLDSTGCKACVCNADGTE 880
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
T C+ GQC CK V+G C
Sbjct: 881 TGT-FCNKTSGQCVCKAYVQGHTC 903
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 115/253 (45%), Gaps = 62/253 (24%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL--NLQCN-SEGRCQCK 78
G C+ C+ G C++CRD +Y C C C G++ CN + G C CK
Sbjct: 890 GQCV-CKAYVQGHTCDECRDGFYSLGASPALGCVPCTCTTAGTVGSTSVCNKTNGVCPCK 948
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
V+GD C++C N++ +A GC+ C C+P G+V T C+ GQC L++R
Sbjct: 949 TFVSGDNCNQCQENYWGLDQADPDGCQPCSCDPTGTVAGT-ACNQATGQCTC--LANR-- 1003
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN-----LQCN----------- 179
+ RRC DT G+ + N L+CN
Sbjct: 1004 ---------------------EGRRC--DTCSAGYYVTPNSGDGCLECNCNAAGTQAGTV 1040
Query: 180 ---SEGRCQCK--PGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKG 232
+ G+CQC+ GV G CD C +++F G C C C+PAGS + C+ G
Sbjct: 1041 CDAATGQCQCRLNSGVGGRACDECLPEYFNFDPGSGSCSPCGCDPAGSTNTS--CNPNTG 1098
Query: 233 QCECKDNVEGAQC 245
QCECKD VEG +C
Sbjct: 1099 QCECKDFVEGDKC 1111
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 20/199 (10%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSL-NLQCN-SEGRCQCKPGVTGD 84
C+ G NC +C++NY+ ++ + C C+C+P G++ CN + G+C C G
Sbjct: 947 CKTFVSGDNCNQCQENYWGLDQADPDGCQPCSCDPTGTVAGTACNQATGQCTCLANREGR 1006
Query: 85 KCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+CD C +Y +G C C CN AG+ T CD+ GQC+ S G + +
Sbjct: 1007 RCDTCSAGYYVTPNSGDGCLECNCNAAGTQAGT-VCDAATGQCQCRLNSGVGGRACDECL 1065
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLG--HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCD 199
NFDP C P G GS N CN G+C+CK V GDKCD C
Sbjct: 1066 PEYFNFDPGSGS------CS----PCGCDPAGSTNTSCNPNTGQCECKDFVEGDKCDTCV 1115
Query: 200 VNHYDFGEAGCKSCECNPA 218
+ E+ C P+
Sbjct: 1116 AGSSNLQESNPFGCSKAPS 1134
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 103/245 (42%), Gaps = 49/245 (20%)
Query: 35 GPNCEKCRDNYYQKS---GDNF----CTACNC-------------NPIGSLNLQCNSEGR 74
G NCE+C+ Y K GDN C C C +P +++L G
Sbjct: 625 GNNCEECQPLYNDKPFRHGDNLNAYNCRPCECYGHADSCHYNASLDPFPNIHLS-GGGGV 683
Query: 75 C-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCE- 126
C C+ G +CD C Y + G+ C C+CN +G V + CD + GQC
Sbjct: 684 CDDCQHNTIGRRCDTCADEFYREIGKPLDAVDVCTPCDCNVSG-VDGSLVCDKIGGQCAC 742
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
AQ+ R + +P G C+ + L + C+ +G+C C
Sbjct: 743 KAQVDGRQCDQCRAGYFNLTQTNPDG--------CENCSCNLAGTAGGDSTCDDDGQCNC 794
Query: 187 KPGVTGDKCDRCDVNHYDF------GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
K V KCDRCD Y F AGC+ C+CN GS N D+ GQC+CK NV
Sbjct: 795 KANVINLKCDRCD---YGFKLLTASNPAGCEPCQCNTYGSTSQFCNPDT--GQCQCKTNV 849
Query: 241 EGAQC 245
EG C
Sbjct: 850 EGLLC 854
>gi|363732271|ref|XP_419746.3| PREDICTED: laminin subunit alpha-2 [Gallus gallus]
Length = 3131
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 111/268 (41%), Gaps = 68/268 (25%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNCNP 61
N FS C FD+ HG C +C GP CE+C + Y+ + C C CN
Sbjct: 809 NNFSPTCHFDQ------SHGLICDECPVGYVGPRCERCAEGYFGQPLIPGGSCQPCQCNN 862
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CK G TG C+RC + FG+A C+ C C+
Sbjct: 863 ----NLDFSIPGSCDSLSGACLICKSGTTGQYCERCADGY--FGDALDARNCQPCRCHVN 916
Query: 110 GSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
GS+ CDS GQCE A + R CK +T+ L
Sbjct: 917 GSISEI--CDSQTGQCECKANVIGR-----------------------QCDTCKPETFGL 951
Query: 169 GHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
GS + C+ G+C C+PGVTG KCDRC Y+F E GC C C+
Sbjct: 952 QSSRGCVPCNCNSFGSKSFDCDGNGQCYCQPGVTGKKCDRCAHGFYNFEEGGCTPCACSQ 1011
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD V G+C C N G C
Sbjct: 1012 FGN-----NCDPVSGRCICPPNTIGEMC 1034
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 110/238 (46%), Gaps = 50/238 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+ C+ + C CNCN GS + C+ G+C C+PGVTG KCD
Sbjct: 931 ECKANVIGRQCDTCKPETFGLQSSRGCVPCNCNSFGSKSFDCDGNGQCYCQPGVTGKKCD 990
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y+F E GC C C+ G+ NCD V G+C
Sbjct: 991 RCAHGFYNFEEGGCTPCACSQFGN-----NCDPVSGRCICPP------------------ 1027
Query: 148 FDPAGNRIWDL-RRCKRDTY--PLGHG---------GSLNLQCN-SEGRCQCKPGVTGDK 194
N I ++ +C + + + HG G+L+ QC+ + G C C+P +GDK
Sbjct: 1028 -----NTIGEMCDKCAPNHWGHDIVHGCKPCDCSLIGALSAQCDLNTGCCFCRPEFSGDK 1082
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKN-------TPNCDSVKGQCECKDNVEGAQC 245
C C ++++ + C +C+C +G+ T +C + GQC CK NVEG C
Sbjct: 1083 CTECRSGYWNYPQ--CIACQCVLSGTDPRSCETDLGTCSCVNHTGQCSCKVNVEGVHC 1138
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + +R GG C++C DG NCE C D Y++ G
Sbjct: 336 CNCHGKTEECYYDQNVADRNQSLNIFGEYIGGGVCVNCTSHTDGINCETCVDGYFRPKGV 395
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
+ C C+C+P GSL+ C + G C CK G G+ C RC + +
Sbjct: 396 LPDSPDPCQPCSCDPNGSLHETCVKDEKHAEGDMLPGFCHCKTGYAGEHCSRCALGYT-- 453
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G C C C+ GS P
Sbjct: 454 GYPDCLPCNCSVEGSANIDP 473
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C+KC N++ + C C+C+ IG+L+ QC+ + G C C+P +
Sbjct: 1021 GRCI-CPPNTIGEMCDKCAPNHWGHDIVHGCKPCDCSLIGALSAQCDLNTGCCFCRPEFS 1079
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
GDKC C ++++ + C +C+C +G+
Sbjct: 1080 GDKCTECRSGYWNYPQ--CIACQCVLSGT 1106
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 95/247 (38%), Gaps = 52/247 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRCQ-CKPGVTG 83
DC G +CE C + + +G F CT C C G + G C CK G
Sbjct: 718 DCPPGYAGTSCEYCWPQHRRVNGTIFGGVCTPCTC--FGHAESCDDITGECLDCKHNTGG 775
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
CDRC Y G C+ C C N P+ ++ C Q S G + E
Sbjct: 776 SYCDRCLPGFYGDPTKGTAEDCQLCACP-----LNIPS-NNFSPTCHFDQ--SHGLICDE 827
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTY--PLGHGGS-------LNLQCNSEGRCQ----- 185
P G RC + PL GGS NL + G C
Sbjct: 828 C---------PVGYVGPRCERCAEGYFGQPLIPGGSCQPCQCNNNLDFSIPGSCDSLSGA 878
Query: 186 ---CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
CK G TG C+RC + FG+A C+ C C+ GS+ CDS GQCECK
Sbjct: 879 CLICKSGTTGQYCERCADGY--FGDALDARNCQPCRCHVNGSISEI--CDSQTGQCECKA 934
Query: 239 NVEGAQC 245
NV G QC
Sbjct: 935 NVIGRQC 941
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G+ C RC + + G C C C SV+ + N D G C CK++VE
Sbjct: 432 GFCHCKTGYAGEHCSRCALGYT--GYPDCLPCNC----SVEGSANIDPCVGLCVCKEHVE 485
Query: 242 GAQC 245
G C
Sbjct: 486 GENC 489
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
C C +G CE+C Y Q G + C C C+ GS+ + C+ + G C CKPG
Sbjct: 1489 CTACPPGYEGQYCERCSPGYTGNPQTPGGS-CQECECDQYGSMPVPCDPATGVCTCKPGF 1547
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCE 105
TG KC C+ + Y C SC+
Sbjct: 1548 TGWKCAGCE-HRYARDGMKCISCD 1570
>gi|363727488|ref|XP_415943.3| PREDICTED: laminin subunit beta-1 [Gallus gallus]
Length = 1785
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 108/224 (48%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG S +C FD +Y TG+ GG C DCQ + G NCE+C+ Y+Q +
Sbjct: 333 CNCNGHSTQCHFDMAVYMATGNTSGGVCDDCQHNTVGRNCEQCKPFYFQHPERDLRDPDV 392
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C CNC+P GS N G+C+CK V G++CD C Y +G
Sbjct: 393 CEPCNCDPAGSQNGGVCDRYTDFSTGLIAGQCRCKLFVEGERCDLCKEGFYGLSADDPSG 452
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+SC CNP G+ CDS G C +L + + + L + D G R D
Sbjct: 453 CQSCACNPLGTHPGGNPCDSETGNCYCKRLVTGKQCNQCLPEHWGLSNDMDGCRPCD--- 509
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
GG+L+ C+SE G+C+C+P + G +C++ + +Y
Sbjct: 510 -------CDQGGALHNNCSSESGQCECRPHMFGRQCNQVEPGYY 546
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 115/318 (36%), Gaps = 94/318 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C+CNG ++ C + + G CL C+ GPNCE+C YY
Sbjct: 865 CHCNGHADDC---------SPYTGECLHCRDHTAGPNCERCEAGYYGDPILGSGDHCRPC 915
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGE 98
+SG F + C +P+ LQ C C G G +CD C + D
Sbjct: 916 PCPDGPESGRQFASGCYQDPV---TLQV----VCVCSTGYIGSRCDECASGFFGSPDEVG 968
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRKNFD 149
C+ C+CN + CD G C E+ L +G + L+ RK
Sbjct: 969 GACQPCQCNNNIDSTDPEACDKRTGTCVKCLYHTEGENCHLCRQGYYGSALQQDCRKC-- 1026
Query: 150 PAGNRIWDLR------------------------------RCKRDTYPLGHGG------- 172
N + +R RC +T+ L G
Sbjct: 1027 -VCNYLGTVREDCDDAENCRCEAATGQCRCLPGVVGQTCDRCAPNTWRLASGTGCEPCDC 1085
Query: 173 ----SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
S+ L CN G+C C PG G C C + C++C+CNP G TP C
Sbjct: 1086 DTARSIGLACNEFTGQCHCMPGFGGRTCRECQELFWGDPSVECRACDCNPRGI--QTPQC 1143
Query: 228 DSVKGQCECKDNVEGAQC 245
D GQC C + VEG +C
Sbjct: 1144 DRATGQCICNEGVEGPRC 1161
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVN 92
P + C++ + S TA C C+P GSL+ C+ S G+CQC+P V G +C+RC
Sbjct: 748 PMTDVCKNIIFSISALLHETALSCQCDPQGSLSSVCDPSGGQCQCRPNVVGRQCNRCAPG 807
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GC+ CEC+ GS + CD+ GQC
Sbjct: 808 TFGFGPSGCRPCECHLRGSYNSF--CDAETGQC 838
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 118/291 (40%), Gaps = 67/291 (23%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F +E+ GHC+ C+ + G NCE+C D Y+ +
Sbjct: 269 CFCYGHASECAPVEGFSEEVEGMVH--GHCM-CRHNTKGLNCEQCLDFYHDLPWRPAEGR 325
Query: 50 GDNFCTACNCN--------PIGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN + N+ G C+ G C++C ++ E
Sbjct: 326 NSNACKKCNCNGHSTQCHFDMAVYMATGNTSGGVCDDCQHNTVGRNCEQCKPFYFQHPER 385
Query: 100 G------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
C+ C C+PAGS G C+ S G + Q R G
Sbjct: 386 DLRDPDVCEPCNCDPAGSQNG--------GVCDRYTDFSTGLIAG----QCRCKLFVEGE 433
Query: 154 RIWDLRRCKRDTY----------------PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
R DL CK Y PLG N C+SE G C CK VTG +C+
Sbjct: 434 RC-DL--CKEGFYGLSADDPSGCQSCACNPLGTHPGGN-PCDSETGNCYCKRLVTGKQCN 489
Query: 197 RCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C H+ GC+ C+C+ G++ N NC S GQCEC+ ++ G QC
Sbjct: 490 QCLPEHWGLSNDMDGCRPCDCDQGGALHN--NCSSESGQCECRPHMFGRQC 538
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS N C++E G+C C PGV
Sbjct: 787 GGQC-QCRPNVVGRQCNRCAPGTF-GFGPSGCRPCECHLRGSYNSFCDAETGQCHCFPGV 844
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECN 107
G +CDRC + F C+ C CN
Sbjct: 845 YGRQCDRCLPGFWGF--PSCQPCHCN 868
>gi|118102449|ref|XP_425827.2| PREDICTED: laminin subunit beta-3 [Gallus gallus]
Length = 1175
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 118/263 (44%), Gaps = 32/263 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG S C FD E+++ +G GG C DCQ + +G NCE+C+ NY++ +
Sbjct: 324 CNCNGHSASCHFDPEVFHSSGGVSGGVCDDCQHNTEGNNCERCKTNYFRNQRQDLTHPEA 383
Query: 54 CTACNCNPIGSLNLQC--NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ G C CK V G++C C A GC+ C CN
Sbjct: 384 CQPCECDPDGTVPGSVCDPLSGHCVCKENVQGERCHLCKPGFAQLAHANPLGCRRCACNV 443
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G+ +N P CD G C V T+ + ++D A R R C+ +
Sbjct: 444 LGTRQNVP-CDDETGSCSCLP----NVVGTDCDQCAAGHWDMASGR--GCRPCECNP--- 493
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCDR-----CDVNHYDFGEAGCKSCECNPAGSVK 222
GS ++ CN G+CQC+ G TG C C H+ GC C C+ G+
Sbjct: 494 --SGSHSIHCNQFTGQCQCREGFTGRTCSAAQQQVCPDRHFGDVRVGCTECNCDFQGT-- 549
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
CD G C C+ V G +C
Sbjct: 550 EDVGCDKSTGHCLCRPGVTGPRC 572
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 123/278 (44%), Gaps = 44/278 (15%)
Query: 1 CNCNGFSNRCFFDKELY-----NRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSGD 51
C CNG ++RC ++ + + G C +CQ + GPNC C Y + + D
Sbjct: 257 CFCNGHADRCIPSRDPHAMDNCSLPQVHGRC-ECQHNTAGPNCGHCAALYNDRPWAPAED 315
Query: 52 N---FCTACNCN---------PIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY---- 94
N C CNCN P + S G C C+ G+ C+RC N++
Sbjct: 316 NDPHECQLCNCNGHSASCHFDPEVFHSSGGVSGGVCDDCQHNTEGNNCERCKTNYFRNQR 375
Query: 95 -DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT-ELRVQSRKNFDPA 151
D C+ CEC+P G+V + CD + G C + R H + + +P
Sbjct: 376 QDLTHPEACQPCECDPDGTVPGS-VCDPLSGHCVCKENVQGERCHLCKPGFAQLAHANPL 434
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
G RRC + G N+ C+ E G C C P V G CD+C H+D G
Sbjct: 435 G-----CRRCACNVL----GTRQNVPCDDETGSCSCLPNVVGTDCDQCAAGHWDMASGRG 485
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C+ CECNP+GS ++ +C+ GQC+C++ G C +
Sbjct: 486 CRPCECNPSGS--HSIHCNQFTGQCQCREGFTGRTCSA 521
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNH 93
CT CNC+ G+ ++ C+ S G C C+PGVTG +CD+C +H
Sbjct: 539 CTECNCDFQGTEDVGCDKSTGHCLCRPGVTGPRCDQCQRDH 579
>gi|2497588|sp|Q60675.1|LAMA2_MOUSE RecName: Full=Laminin subunit alpha-2; AltName: Full=Laminin M chain;
AltName: Full=Laminin-12 subunit alpha; AltName:
Full=Laminin-2 subunit alpha; AltName: Full=Laminin-4
subunit alpha; AltName: Full=Merosin heavy chain; Flags:
Precursor
gi|699110|gb|AAC52165.1| laminin-2 alpha2 chain precursor [Mus musculus]
Length = 3106
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 117/242 (48%), Gaps = 30/242 (12%)
Query: 12 FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS 71
F ++ + RTG +C+ + G +C++C+ + C CNCN GS + C +
Sbjct: 922 FSEDCHTRTGQ----CECRPNVQGRHCDECKPETFGLQLGRGCLPCNCNSFGSKSFDCEA 977
Query: 72 EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C+PGV G KCDRC +++F E GC +C+C+ G+ NCD GQC +
Sbjct: 978 SGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHLGN-----NCDPKTGQCICPP-N 1031
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
+ G +E + + G ++ C T GSL QCN + G+C C P
Sbjct: 1032 TTGEKCSECLPNTWGHSIVTGCKV-----CNCSTV-----GSLASQCNVNTGQCSCHPKF 1081
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGA 243
+G KC C H+++ C C+C G+ T + ++ K GQC CK NVEG
Sbjct: 1082 SGMKCSECSRGHWNY--PLCTLCDCFLPGTDATTCDLETRKCSCSDQTGQCSCKVNVEGV 1139
Query: 244 QC 245
C
Sbjct: 1140 HC 1141
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 112/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 812 NNFSPTCHLDRSL------GLICDECPIGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 865
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C C+
Sbjct: 866 ----NLDYSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVNTKNCQPCRCDIN 919
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS +C + GQCE VQ R CK +T+ L
Sbjct: 920 GSFSE--DCHTRTGQCECRP-----------NVQGRH-----------CDECKPETFGLQ 955
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+
Sbjct: 956 LGRGCLPCNCNSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHL 1015
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD GQC C N G +C
Sbjct: 1016 GN-----NCDPKTGQCICPPNTTGEKC 1037
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 105/254 (41%), Gaps = 60/254 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G CL+C+ GP C +C +Y +NF C+ + SL
Sbjct: 767 GECLNCKDHTGGPYCNECLPGFYGDPTRGSPEDCQPCACPLNIPSNNFSPTCHLD--RSL 824
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDS 120
L C+ +C G TG +C+RC + FG+ C+ C+CN +CDS
Sbjct: 825 GLICD-----ECPIGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDYSIPGSCDS 877
Query: 121 VKGQCESAQLSSRGRVHTEL-------RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
+ G C + + GR + EL + KN P C+ D GS
Sbjct: 878 LSGSCLICKPGTTGR-YCELCADGYFGDAVNTKNCQP----------CRCDI-----NGS 921
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVK 231
+ C++ G+C+C+P V G CD C + GC C CN GS + +C++
Sbjct: 922 FSEDCHTRTGQCECRPNVQGRHCDECKPETFGLQLGRGCLPCNCNSFGS--KSFDCEA-S 978
Query: 232 GQCECKDNVEGAQC 245
GQC C+ V G +C
Sbjct: 979 GQCWCQPGVAGKKC 992
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 97/238 (40%), Gaps = 59/238 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F D E G C CQ G C++C Y+ Q+ G C AC+
Sbjct: 963 CNCNSFGSKSF-DCE------ASGQCW-CQPGVAGKKCDRCAHGYFNFQEGG---CIACD 1011
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 116
C+ +G+ C+ + G+C C P TG+KC C N + GCK C C+ GS+ +
Sbjct: 1012 CSHLGN---NCDPKTGQCICPPNTTGEKCSECLPNTWGHSIVTGCKVCNCSTVGSLAS-- 1066
Query: 117 NCDSVKGQCE-SAQLS-------SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
C+ GQC + S SRG W+ C D +
Sbjct: 1067 QCNVNTGQCSCHPKFSGMKCSECSRGH--------------------WNYPLCTLCDCFL 1106
Query: 168 LGHGGSL-NLQC------NSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
G + +L+ + G+C CK V G CDRC + GC SC C
Sbjct: 1107 PGTDATTCDLETRKCSCSDQTGQCSCKVNVEGVHCDRCRPGKFGLDAKNPLGCSSCYC 1164
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1490 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDRVTGLCTCRPGAT 1549
Query: 83 GDKCDRCDVNH 93
G KCD C+ H
Sbjct: 1550 GRKCDGCEHWH 1560
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G CDRC ++ G C+ C C+ GS N D G C CK+NVE
Sbjct: 436 GSCHCKTGFGGVNCDRCVRGYH--GYPDCQPCNCSGLGST----NEDPCVGPCSCKENVE 489
Query: 242 GAQC 245
G C
Sbjct: 490 GEDC 493
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S++C D E C +CQ G CE+C YY + N C C
Sbjct: 1416 CQCNGHSSQC--DPE-------TSVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCA 1466
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C +P + + C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1467 CPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1526
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1527 PYGSLPVP--CDRVTGLC 1542
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 6 FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL 65
S C D++ R G C C+ G NC++C Y+ G C CNC+ +GS
Sbjct: 418 LSEVCVKDEKYAQRGLKPGSC-HCKTGFGGVNCDRCVRGYH---GYPDCQPCNCSGLGST 473
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
N + G C CK V G+ C RC ++ E K CE
Sbjct: 474 N-EDPCVGPCSCKENVEGEDCSRCKSGFFNLQEDNQKGCE 512
>gi|198434974|ref|XP_002125931.1| PREDICTED: similar to laminin, alpha 2 (predicted) [Ciona
intestinalis]
Length = 2893
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 100/228 (43%), Gaps = 34/228 (14%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ D G C+ C N Y C +CNCNP GS+ +QC ++G C C+ GV G CD
Sbjct: 645 CRRDVYGRKCDACASNNYLSKEQRMCISCNCNPTGSIMMQCRADGSCVCRTGVVGKLCDS 704
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKN 147
C ++ FG+ GC+ C C NCD V G+C G +H
Sbjct: 705 CSAGYHSFGDNGCRECNCPHTNG-----NCDPVSGECRCPPNTEGEGCMHCV-------- 751
Query: 148 FDPAGNRIWDLRR-CKRDTYPL---GHGGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNH 202
G+ W + CK L GS L C N G+C CK +G C+ C +
Sbjct: 752 ---TGSYQWSVNNGCK-----LCNCSEVGSTALTCDNITGQCPCKYENSGQTCNECRRGY 803
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSV-----KGQCECKDNVEGAQC 245
Y G CK C C +G+ +T + D GQC CK NVEG C
Sbjct: 804 Y--GYPSCKPCNCVVSGTQTDTCSNDGTCQCTDNGQCHCKINVEGKHC 849
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 106/259 (40%), Gaps = 48/259 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
+ N FS C D R C++C G CE C + Y+ + C CN
Sbjct: 523 ISSNNFSPTCRLD-----RVPGEMVCMECPPGYSGKRCEMCSEGYFGNPSTLGGTCQLCN 577
Query: 59 CNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNT 115
CN G+ G C+ C+ G+ C+RC+ +Y C CEC+P GSV
Sbjct: 578 CN--GNSRSCDTVTGVCKHCQGHTAGEHCERCEAAYYGDAIVRKNCGPCECSPVGSVSR- 634
Query: 116 PNCDSVKGQCESAQL---------SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
CD+V GQC + +S + E R+ N +P
Sbjct: 635 -QCDAVTGQCPCRRDVYGRKCDACASNNYLSKEQRMCISCNCNPT--------------- 678
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
GS+ +QC ++G C C+ GV G CD C ++ FG+ GC+ C C N
Sbjct: 679 -----GSIMMQCRADGSCVCRTGVVGKLCDSCSAGYHSFGDNGCRECNCPHTNG-----N 728
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD V G+C C N EG C
Sbjct: 729 CDPVSGECRCPPNTEGEGC 747
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 72/170 (42%), Gaps = 21/170 (12%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
CQ +G +CE+C D Y+ S FC C C+ GSL+ C+ G+C C G+ G
Sbjct: 1192 CQIGYEGKHCERCADGYFGDPTSPGGFCAKCGCSVAGSLDGVCDKLTGQCNCDEGIQGRI 1251
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CDRC H E GC+ C AG K E +L++R L+V R
Sbjct: 1252 CDRCSDKHVITPE-GCQECNDECAG-----------KLLLEIEELANR-----TLKVDIR 1294
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
F P NR+ R P L+ + N R + + V G KC
Sbjct: 1295 DMFPPPWNRLIVARNVTAQLQPYIE-LLLHRKLNYFVRQRRRVKVHGKKC 1343
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 61/144 (42%), Gaps = 35/144 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYY----- 46
CNC+G + C++D ++ R GG C+ C+ DG NC+ C D Y
Sbjct: 104 CNCHGHAEECYYDPDVDGRGESLDINGDYLGGGVCVGCRDGTDGVNCQSCVDGMYRPLDV 163
Query: 47 QKSGDNFCTACNCNPIGSLNL--------------QCNSE-----GRCQCKPGVTGDKCD 87
+ + N C C+C+P G L ++E G C CK G G CD
Sbjct: 164 EPNARNPCLPCSCDPFGGLRTSDGTGPFTCVKDIDHMDAERDLFPGSCYCKEGYAGHICD 223
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
RC + G C+ C+CN GS
Sbjct: 224 RCAFGYT--GYPICQPCQCNITGS 245
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 23/126 (18%)
Query: 7 SNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN 66
+ R F Y + G+ GH C++C Y +G C C CN GS N
Sbjct: 202 AERDLFPGSCYCKEGYAGHI-----------CDRCAFGY---TGYPICQPCQCNITGSRN 247
Query: 67 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKG 123
+ G C CK VTGD+CD+C + Y+ GC +C CN A T NC+S
Sbjct: 248 ID-PCVGDCVCKEHVTGDRCDQCKLGFYNLQRENPMGCDTCYCNGA-----TKNCESSNL 301
Query: 124 QCESAQ 129
+ + Q
Sbjct: 302 KWSTIQ 307
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G CDRC + G C+ C+CN GS N D G C CK++V
Sbjct: 209 GSCYCKEGYAGHICDRCAFGYT--GYPICQPCQCNITGS----RNIDPCVGDCVCKEHVT 262
Query: 242 GAQC 245
G +C
Sbjct: 263 GDRC 266
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 27/139 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC- 59
CNC SN C +++ G CL+C G NCE C YY +N C C C
Sbjct: 1116 CNCFNRSNSC----DIFT-----GRCLNCIDKFVGHNCEMCIPGYYL--SENSCHKCECP 1164
Query: 60 --NPIGSLNLQCNSEGR--------CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCEC 106
N + + + C+++G C+ G G C+RC ++ D G C C C
Sbjct: 1165 GDNALNNFSPTCHADGTDGITTYTCDACQIGYEGKHCERCADGYFGDPTSPGGFCAKCGC 1224
Query: 107 NPAGSVKNTPNCDSVKGQC 125
+ AGS+ CD + GQC
Sbjct: 1225 SVAGSLDGV--CDKLTGQC 1241
Score = 36.6 bits (83), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 14/90 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL--------QCNSEGRCQCKPG 80
C+ + G C +CR YY G C CNC G+ QC G+C CK
Sbjct: 787 CKYENSGQTCNECRRGYY---GYPSCKPCNCVVSGTQTDTCSNDGTCQCTDNGQCHCKIN 843
Query: 81 VTGDKCDRCDVNHYDFG---EAGCKSCECN 107
V G CDRC + + GC +C C+
Sbjct: 844 VEGKHCDRCVEGAFGLSSENKVGCTTCFCS 873
>gi|441639302|ref|XP_003281581.2| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Nomascus
leucogenys]
Length = 3593
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 103/233 (44%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 589 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 644
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 645 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 694
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G ++ C C+ V G CDR
Sbjct: 695 DTCVPGAYNFP----------YCEAGSCHPAGLAPVDPALSEAQVPCMCRAHVEGPSCDR 744
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+P G++ C GQC CK +V G C +
Sbjct: 745 CKPGFWGLSPSNPEGCTRCSCDPRGTLGGVAECQPRTGQCFCKPHVCGQACAA 797
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 101/259 (38%), Gaps = 60/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G + C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 346 CNCHGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPDH 405
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC + + GRC C+P +G++CD C G G SC
Sbjct: 406 PLDSPHVCRRCNCESDFTDGTCEDLTGRCYCRPNFSGERCDVCAK-----GFTGFPSCYP 460
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P+ S +R+ PAG + C D
Sbjct: 461 TPSSSND------------------------------TREQVLPAGQIV----NC--DCS 484
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G G+ + GRC CKP G C+ C Y GC+ C+C+ G +
Sbjct: 485 AAGTQGNACRKDPRVGRCVCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVADD--R 539
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC C++ EGA C
Sbjct: 540 CDPDTGQCRCREGFEGATC 558
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1795 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFVSSGEDPSAPCVSCP 1845
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1846 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1905
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1906 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGN-------CTRCDCAP 1958
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 1959 CG-----TEACDPHSGHCLCKVGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS--- 2010
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2011 ECHPQSGQCHCRPGTMGPQCR 2031
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 81/210 (38%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1902 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC 1956
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 1957 APCGTEACDPHS-GHCLCKVGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---C 2012
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C ++ L G QC
Sbjct: 2013 HPQSGQCHCR----------------------PGTMGPQCRECAPGSWGLPEQGCRRCQC 2050
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2051 PGGRCDPHTGRCTCPPGLSGERCDTCSQKH 2080
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G+ C G +C C+ V G C RC ++ F C+ C+C
Sbjct: 1363 NNGARPCGCHEVGATGPTCEPFGGQCPCRAHVIGRDCSRCATGYWGF--PNCRPCDCG-- 1418
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--- 166
CD + GQC P + D C+ T+
Sbjct: 1419 -----ARLCDELTGQC----------------------ICPPRTVLPDCLLCQPQTFGCH 1451
Query: 167 PL-----------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
PL G + C+++ G+C+C+P VTG +CD C + G C+ C+
Sbjct: 1452 PLVGCEECNCSGPGVQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCD 1509
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ AG+ CD + GQC CK+NV+G +C
Sbjct: 1510 CHEAGTAPGV--CDPLTGQCYCKENVQGPRC 1538
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 82/201 (40%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 481 CDCSAAGTQGNACRKDPRVGRCVCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 537
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL--- 168
+ CD GQC + R+ F+ A RC + PL
Sbjct: 538 D--RCDPDTGQC-----------------RCREGFEGA-----TCDRCAPGYFHFPLCQL 573
Query: 169 ---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 574 CGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALDQL- 630
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 631 -CGA-GGLCRCRPGYTGTACQ 649
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSE-GRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+P G+L +C G+C CKP V G
Sbjct: 733 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDPRGTLGGVAECQPRTGQCFCKPHVCG 792
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + + GC+SC+C+ G++ + C+ G C
Sbjct: 793 QACAACKDGFFGLDQTDYFGCRSCQCDIGGALGQS--CEPRTGAC 835
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C + E GC+ C+C P G CD G+C C +
Sbjct: 2017 GQCHCRPGTMGPQCRECAPGSWGLPEQGCRRCQC-PGG------RCDPHTGRCTCPPGLS 2069
Query: 242 GAQC 245
G +C
Sbjct: 2070 GERC 2073
>gi|351712225|gb|EHB15144.1| Netrin-4 [Heterocephalus glaber]
Length = 672
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C +C+ + +G +C++C+ +Y+ S +
Sbjct: 376 CKCNGHADTCHFDINVWAASGNRSGGVCSNCRHNTEGQHCQRCKPGFYRDLRRPFSAPDA 435
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C AC+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 436 CKACSCHPVGSAVLPFNSVIFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 495
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 496 --AGS------CDPLTGDCLSS 509
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 460 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 506
>gi|301613710|ref|XP_002936356.1| PREDICTED: laminin subunit alpha-2-like [Xenopus (Silurana)
tropicalis]
Length = 2765
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 105/236 (44%), Gaps = 48/236 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ + G C++C + C CNCN GS + C+ G+C+C+PGVTG KCD
Sbjct: 680 CRNNVIGRQCDECLPQTFGLQSAQGCVPCNCNSFGSKSFDCDDSGQCRCQPGVTGKKCDH 739
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ--CESAQLSSRGRVHTELRVQSRK 146
CD YDF E GC CEC G+ NCD+ G C + +
Sbjct: 740 CDHGFYDFQEGGCTPCECPHVGN-----NCDADTGHCVCPPNTIGEQC------------ 782
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNLQCNSE-GRCQCKPGVTGDKCD 196
D W Y + G GSL++QCNS+ G C C+P +GDKC
Sbjct: 783 --DKCAPNHWG--------YSIITGCKACNCSNPGSLSMQCNSDTGCCFCRPNFSGDKCS 832
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
C + + + C +C C AGS T + ++ K GQC CK NVEG C
Sbjct: 833 SCRLGYRKY--PTCVNCGCMLAGSQPQTCDQETEKCSCAEQTGQCNCKINVEGVLC 886
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 92/203 (45%), Gaps = 40/203 (19%)
Query: 52 NFCTACNCNPIGSLN----LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 107
N N +P L+ L C+S C+PG TG +C+ H + +C C+
Sbjct: 611 NIIIEVNFSPTCHLDKTRGLVCDS-----CRPGYTGQRCESSHCTHV---KVAIHACNCH 662
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGR-----VHTELRVQSRKNFDPAGNRIWDLRRCK 162
GSV + C++ GQC+ + GR + +QS + P C
Sbjct: 663 VNGSVSTS--CNTETGQCQCRN-NVIGRQCDECLPQTFGLQSAQGCVP----------CN 709
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+++ GS + C+ G+C+C+PGVTG KCD CD YDF E GC CEC G+
Sbjct: 710 CNSF-----GSKSFDCDDSGQCRCQPGVTGKKCDHCDHGFYDFQEGGCTPCECPHVGN-- 762
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
NCD+ G C C N G QC
Sbjct: 763 ---NCDADTGHCVCPPNTIGEQC 782
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNR---------TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+ S C++D+++ ++ GG C++C + G NCE C D +Y+ G
Sbjct: 330 CNCHWKSEECYYDQQVADKRLSLDILGNYSGGGVCINCTSNTAGINCETCVDRFYRPKGV 389
Query: 52 N-----FCTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
+ C C+C+PIGSL+ C + G C CK G G++CD+C V + +
Sbjct: 390 SPTQPYPCQPCSCDPIGSLHDICVKDEKQAPRGMLPGSCHCKSGFAGERCDKCAVGYIGY 449
Query: 97 GEAGCKSCECNPAGSVKNTP 116
E C C C+ GS P
Sbjct: 450 PE--CVRCNCSLIGSTNKDP 467
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 99/232 (42%), Gaps = 46/232 (19%)
Query: 35 GPNCEKCRDNYY-QKSGDNFCT-------ACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
G C+ CR Y Q+ + CT ACNC+ GS++ CN+E G+CQC+ V G +
Sbjct: 629 GLVCDSCRPGYTGQRCESSHCTHVKVAIHACNCHVNGSVSTSCNTETGQCQCRNNVIGRQ 688
Query: 86 CDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
CD C + A GC C CN GS + +CD GQC Q G+
Sbjct: 689 CDECLPQTFGLQSAQGCVPCNCNSFGS--KSFDCDD-SGQCR-CQPGVTGK--------- 735
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC--------NSEGRCQCKPGVTGDKCD 196
C Y GG +C G C C P G++CD
Sbjct: 736 ------------KCDHCDHGFYDFQEGGCTPCECPHVGNNCDADTGHCVCPPNTIGEQCD 783
Query: 197 RCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+C NH+ + GCK+C C+ GS+ + C+S G C C+ N G +C S
Sbjct: 784 KCAPNHWGYSIITGCKACNCSNPGSL--SMQCNSDTGCCFCRPNFSGDKCSS 833
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
GHC+ C + G C+KC N++ S C ACNC+ GSL++QCNS+ G C C+P +
Sbjct: 769 GHCV-CPPNTIGEQCDKCAPNHWGYSIITGCKACNCSNPGSLSMQCNSDTGCCFCRPNFS 827
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
GDKC C + + + C +C C AGS T CD +C A+
Sbjct: 828 GDKCSSCRLGYRKY--PTCVNCGCMLAGSQPQT--CDQETEKCSCAE 870
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G++CD+C V + + E C C C+ GS P D C CKDNVE
Sbjct: 426 GSCHCKSGFAGERCDKCAVGYIGYPE--CVRCNCSLIGSTNKDPCVDP----CICKDNVE 479
Query: 242 GAQC 245
G C
Sbjct: 480 GQNC 483
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
C C +G CE+C Y G C C CNP GSL++ C+ + G+C CK G T
Sbjct: 1233 CTACPLGYEGQYCERCASGYTGNPGVPGGSCQECECNPYGSLSMICHPTTGQCTCKTGST 1292
Query: 83 GDKCDRCDVNH 93
G KC C H
Sbjct: 1293 GLKCAGCTDRH 1303
>gi|345781074|ref|XP_003432078.1| PREDICTED: netrin-4 isoform 2 [Canis lupus familiaris]
Length = 605
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKMCSCHPVGSAALPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCISS 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 462
>gi|391347857|ref|XP_003748170.1| PREDICTED: laminin subunit beta-2-like [Metaseiulus occidentalis]
Length = 2445
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 108/253 (42%), Gaps = 58/253 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCT 55
C+CN FS+ C FD+E+Y + G GG C++C+ G NCE C D YY Q C
Sbjct: 1038 CDCNNFSDECVFDEEIYLKNGKKSGGRCINCRDHTAGNNCELCEDFYYRNPQGVYGEVCR 1097
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C CN GS N EGRC YD C C G+V+
Sbjct: 1098 RCECNQRGSQN-----EGRCI----------------QYDTETQIAGRCVCK--GNVQG- 1133
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
P CDS K N D ++ +C R +G G
Sbjct: 1134 PRCDSCK--------------------PGFWNLDTNNEEGCEVCKCDRRGIIMGSQG--- 1170
Query: 176 LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKG 232
CN E G+C CK V G CD C+ HY E GCK C+C+ G+ N C+ V G
Sbjct: 1171 --CNQETGKCSCKENVVGQSCDACEEGHYGLEEGPNGCKPCDCDRGGAY-NPDKCNVVTG 1227
Query: 233 QCECKDNVEGAQC 245
QCECK+ VEG +C
Sbjct: 1228 QCECKEGVEGRRC 1240
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 119/259 (45%), Gaps = 39/259 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTA 56
C C+G ++ CF C+DC+ + G CEKC + +Y GD C +
Sbjct: 1545 CQCHGRADTCF---------SQNATCIDCRDNTAGDTCEKCLEGFY---GDPLRGIPCKS 1592
Query: 57 CNC--------NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
C C N S L ++E C CKPG KC+ CD N++ + GC C+CN
Sbjct: 1593 CLCPGTAASGRNHATSCTLSSSNEMFCHCKPGYKTPKCEECDNNYFQ-DKDGCIPCDCNG 1651
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
+ NCD++ G+C +S G + + + ++ + N D + C D+
Sbjct: 1652 KIDLSLEGNCDALTGKCLRCLHNSEG---DQCELCKQGHWKNSNN---DCQECDCDS--- 1702
Query: 169 GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPN 226
GS++ CN + G+C C P V GD+C C YDF GCK C C+ G+V+ +
Sbjct: 1703 --TGSVDSYCNQDNGKCTCHPNVVGDRCSACAEGFYDFHSGKGCKPCNCDVHGTVEGSVT 1760
Query: 227 CDSVKGQCECKDNVEGAQC 245
C GQC CK G QC
Sbjct: 1761 CGH-DGQCYCKPGRGGLQC 1778
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 66/225 (29%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G CL C + +G CE C+ ++ K+ +N C C+C+ GS++ CN + G+C C P V
Sbjct: 1666 GKCLRCLHNSEGDQCELCKQGHW-KNSNNDCQECDCDSTGSVDSYCNQDNGKCTCHPNVV 1724
Query: 83 GDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
GD+C C YDF GCK C NCD V G E +
Sbjct: 1725 GDRCSACAEGFYDFHSGKGCKPC------------NCD-VHGTVEGS------------- 1758
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
+ C +G+C CKPG G +C+ C
Sbjct: 1759 ----------------------------------VTCGHDGQCYCKPGRGGLQCNECSPG 1784
Query: 202 HYDFGEAGCKSCECN-PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y +GC C+C+ G++K CD+ G C+C++ + G +C
Sbjct: 1785 FYGDPASGCYRCDCDGYQGAIKGV--CDARTGHCKCREGMAGPRC 1827
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ + G C+ C Y + C ACNCN GS N CNS G+C C V
Sbjct: 1466 GGQC-KCKMNVVGRQCDACDTTSYGLETEAECKACNCNTEGSKNQFCNSRGKCDCIDEVY 1524
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECN 107
G+KCD C + CK C+C+
Sbjct: 1525 GEKCDMCKPGFWGTPRY-CKPCQCH 1548
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGS 111
G+C+CK V G +CD CD Y EA CK+C CN GS
Sbjct: 1467 GQCKCKMNVVGRQCDACDTTSYGLETEAECKACNCNTEGS 1506
>gi|73978205|ref|XP_532655.2| PREDICTED: netrin-4 isoform 3 [Canis lupus familiaris]
Length = 628
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKMCSCHPVGSAALPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCISS 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 462
>gi|328700493|ref|XP_001950530.2| PREDICTED: laminin subunit alpha-1-like [Acyrthosiphon pisum]
Length = 3098
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 111/230 (48%), Gaps = 36/230 (15%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C+ + G C+ C D ++ S + C C+C+ IG++N CNSE G+C CK G+ G C
Sbjct: 878 NCRSNVIGNQCDACNDGFWNIS-ETGCQKCSCDKIGAINDICNSENGQCTCKLGIGGKNC 936
Query: 87 DRCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
D+C N+Y F GC CE C G CD G+C QL+
Sbjct: 937 DQCLPNYYGFSILGCSECEVCEKPGH-----TCDMDTGRCVCPQLTEGPNC--------- 982
Query: 146 KNFDPAGNRIWDLRR----CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 200
+ A W++ + C D++ G+ N CN+E G C C+ G G KCD+C
Sbjct: 983 -SLCTANAFRWEINKGCQECHCDSF-----GAFNGLCNNETGSCVCRTGYDGPKCDKCSF 1036
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPN-----CDSVKGQCECKDNVEGAQC 245
+Y G C+ C CN AGS N N CD GQCECK NV G +C
Sbjct: 1037 GYY--GYPRCRPCACNYAGSEPNQCNETLCGCDEF-GQCECKINVYGKRC 1083
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 103/235 (43%), Gaps = 40/235 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL-QCNSE-GRCQCKPGV 81
G C++C G+ G NC++C+ ++ + C C+CN IGS+ CN + G+CQCK
Sbjct: 729 GQCINCLGNTIGWNCKECKPGHFGNPIISDCRPCDCNAIGSVITDSCNVDTGQCQCKENF 788
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
TG CDRC ++ A C C CN GS+ + CD G C + S T
Sbjct: 789 TGRTCDRC-MDGLGNTTAECVECNCNHIGSISDL--CDPRSGLCPCKKGVSGINCDT--- 842
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG-----------RCQCKPGV 190
C + + G QCN G +C C+ V
Sbjct: 843 -------------------CSEGFHLFSNQGCTECQCNKTGSNNNICDPITGQCNCRSNV 883
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++CD C+ ++ E GC+ C C+ G++ + C+S GQC CK + G C
Sbjct: 884 IGNQCDACNDGFWNISETGCQKCSCDKIGAINDI--CNSENGQCTCKLGIGGKNC 936
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 97/256 (37%), Gaps = 74/256 (28%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSLN 66
HC C+ + GP C +C +Y +S +NF C N +G
Sbjct: 624 HCSICEHNTTGPQCNECAIGFYGNAIEGTPNDCKKCACPLDESSNNFSPTCKSNSVGG-- 681
Query: 67 LQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKG 123
C +C G +GD C+ C ++ + CK C+CN A CD++ G
Sbjct: 682 YICT-----ECPEGYSGDHCEICAPTYFGNPLVIGSTCKPCDCNEAP-------CDNLTG 729
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WDLRRCKRDTY--PL----------GH 170
QC + GN I W+ + CK + P+
Sbjct: 730 QC----------------------INCLGNTIGWNCKECKPGHFGNPIISDCRPCDCNAI 767
Query: 171 GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
G + CN + G+CQCK TG CDRC ++ A C C CN GS+ + CD
Sbjct: 768 GSVITDSCNVDTGQCQCKENFTGRTCDRC-MDGLGNTTAECVECNCNHIGSISDL--CDP 824
Query: 230 VKGQCECKDNVEGAQC 245
G C CK V G C
Sbjct: 825 RSGLCPCKKGVSGINC 840
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-------GRCQCKPGV 81
C+ DGP C+KC YY G C C CN GS QCN G+C+CK V
Sbjct: 1022 CRTGYDGPKCDKCSFGYY---GYPRCRPCACNYAGSEPNQCNETLCGCDEFGQCECKINV 1078
Query: 82 TGDKCDRC 89
G +CD+C
Sbjct: 1079 YGKRCDQC 1086
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC- 59
C CNG S+ C D G C +C + G +C+ C + YY + C C C
Sbjct: 1390 CECNGRSSICNVDT---------GICKNCTHNTGGAHCDVCAEGYYGDPFTDGCKPCPCP 1440
Query: 60 ----NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG--EAG-CKSCECNPAGSV 112
N S + + + C CK G G CD+C+ + + E G C+ C+CN G V
Sbjct: 1441 SVTKNYAQSCEIDFDGKLICHCKQGYKGSMCDQCEYGWFGYPREEGGKCEPCQCNKFGIV 1500
Query: 113 KNTPNCDSVKGQC 125
+ C GQC
Sbjct: 1501 SD--ECHEETGQC 1511
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
G C +C Y +G C C C+ G + + E +C CK VTGD CD+C + ++
Sbjct: 295 GAKCNECAPGY---NGFPNCKPCACDERGIKTVPLSCESQCDCKEHVTGDNCDKCKMGYF 351
Query: 95 DFGEA---GCKSCECNPAGSV 112
+ GC+ C C+ S+
Sbjct: 352 NLKSTNPDGCEKCFCSGVSSI 372
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 184 CQCKPGVTGDKCDRCDVNHYDFG--EAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
C CK G G CD+C+ + + E G C+ C+CN G V + C GQC C N+
Sbjct: 1460 CHCKQGYKGSMCDQCEYGWFGYPREEGGKCEPCQCNKFGIVSD--ECHEETGQCNCMPNI 1517
Query: 241 EGAQC 245
G C
Sbjct: 1518 TGRDC 1522
>gi|301607117|ref|XP_002933140.1| PREDICTED: laminin subunit beta-1-like [Xenopus (Silurana)
tropicalis]
Length = 1782
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 105/232 (45%), Gaps = 47/232 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ +YQ N
Sbjct: 334 CNCNEHSTHCHFDMAVYMSTGNTSGGVCDDCQHNTMGRNCEQCKPFFYQHPDKDIRDPNI 393
Query: 54 CTACNCNPIGS-----------LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---A 99
C CNC+P GS ++ + G+C+CK V G++CD+C YD
Sbjct: 394 CQPCNCDPAGSQDGGICDRYSDFSVGLIA-GQCRCKLNVEGERCDQCKEGFYDLNAEDPE 452
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL- 158
GC+ C CNP G++ +CDS G C R + + D W L
Sbjct: 453 GCQFCGCNPLGTIPGGNSCDSRNGNCFCK------------RFVTGRKCDQCAPEFWGLS 500
Query: 159 ------RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D HGGS + C+ E G+C+C+P + G +C+ + Y
Sbjct: 501 NDLDGCRPCDCD-----HGGSEDNNCSPESGQCRCRPHMIGRQCNEVESGFY 547
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--------- 72
G CL C +G NC++C+ YY + C C CN +G+ C+ E
Sbjct: 991 QSGLCLKCLYHTEGINCQECQLGYYGNAIQQDCRRCVCNYLGTEQENCSGEIDCHCNRTN 1050
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CDRC N ++ GC+ C C+ S+ + C+ GQC+
Sbjct: 1051 GQCPCLPNVIGQSCDRCAANTWNLASGTGCEPCACDTNRSLGLS--CNEFTGQCQCMP-G 1107
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E ++ F GN + R C D+ G QCN + G C CK GV
Sbjct: 1108 FGGRDCSE----CQELF--WGNPDIECRACDCDSR-----GIQTSQCNRATGHCICKEGV 1156
Query: 191 TGDKCDRC 198
G +CD+C
Sbjct: 1157 EGVRCDKC 1164
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + C++ + S +A C C+P GSL+ C+ G +CQC+P V G C++C
Sbjct: 748 PLTDVCKNFLFTISALLHKSALECQCDPQGSLSSVCDPNGGQCQCRPNVIGRNCNKCAPG 807
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK CEC+ GS + P C + GQC
Sbjct: 808 TFGFGPNGCKPCECDVRGS--SHPFCHTETGQC 838
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 104/273 (38%), Gaps = 52/273 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDN---- 52
C CNG + C G C +C+ +G +CE+C YY SGD+
Sbjct: 865 CQCNGHAEDC---------NALTGECTNCKDHSEGYSCERCLSGYYGDPRLGSGDHCRPC 915
Query: 53 -----------FCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--- 98
F + C +P LQ C C G TG +CD C ++ E
Sbjct: 916 PCPDGPGSERQFASGCYKDPT---TLQV----VCSCNMGYTGIRCDGCASGYFGNPEEIG 968
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WD 157
C+ C CN + ++ C G C + HTE GN I D
Sbjct: 969 GVCQPCHCNNNIDMSDSLACHKQSGLC------LKCLYHTEGINCQECQLGYYGNAIQQD 1022
Query: 158 LRRC---KRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKS 212
RRC T G ++ CN + G+C C P V G CDRC N ++ GC+
Sbjct: 1023 CRRCVCNYLGTEQENCSGEIDCHCNRTNGQCPCLPNVIGQSCDRCAANTWNLASGTGCEP 1082
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+ S+ + C+ GQC+C G C
Sbjct: 1083 CACDTNRSLGLS--CNEFTGQCQCMPGFGGRDC 1113
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G++CD+C YD GC+ C CNP G++ +CDS G C CK
Sbjct: 423 GQCRCKLNVEGERCDQCKEGFYDLNAEDPEGCQFCGCNPLGTIPGGNSCDSRNGNCFCKR 482
Query: 239 NVEGAQC 245
V G +C
Sbjct: 483 FVTGRKC 489
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 160 RCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE 207
RC +T+ L G SL L CN G+CQC PG G C C + +
Sbjct: 1066 RCAANTWNLASGTGCEPCACDTNRSLGLSCNEFTGQCQCMPGFGGRDCSECQELFWGNPD 1125
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C++C+C+ G T C+ G C CK+ VEG +C
Sbjct: 1126 IECRACDCDSRGI--QTSQCNRATGHCICKEGVEGVRC 1161
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 103/264 (39%), Gaps = 61/264 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
G C+ C+ + G NCE+C D Y+ + N C CNCN + ++
Sbjct: 295 GRCV-CRHNTKGLNCEQCLDFYHDLPWRPAEGRSSNACKKCNCNEHSTHCHFDMAVYMST 353
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDS 120
S G C C+ G C++C Y + C+ C C+PAGS
Sbjct: 354 GNTSGGVCDDCQHNTMGRNCEQCKPFFYQHPDKDIRDPNICQPCNCDPAGSQDG------ 407
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-------------- 166
G C+ S G + Q R + G R +CK Y
Sbjct: 408 --GICDRYSDFSVGLIAG----QCRCKLNVEGERC---DQCKEGFYDLNAEDPEGCQFCG 458
Query: 167 --PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSV 221
PLG N C+S G C CK VTG KCD+C + GC+ C+C+ GS
Sbjct: 459 CNPLGTIPGGN-SCDSRNGNCFCKRFVTGRKCDQCAPEFWGLSNDLDGCRPCDCDHGGSE 517
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
N NC GQC C+ ++ G QC
Sbjct: 518 DN--NCSPESGQCRCRPHMIGRQC 539
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
GG C C+ + G NC KC + G N C C C+ GS + C++E G+C C G
Sbjct: 787 GGQC-QCRPNVIGRNCNKCAPGTF-GFGPNGCKPCECDVRGSSHPFCHTETGQCPCIHGA 844
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CD C ++ F C+ C+CN + +C+++ G+C + + S G ++ R
Sbjct: 845 FGRQCDVCLPGYWGF--PSCRQCQCN-----GHAEDCNALTGECTNCKDHSEG--YSCER 895
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ-------CNSEGRCQCKPGVTGDK 194
S DP R+ C+ P G G + C C G TG +
Sbjct: 896 CLSGYYGDP---RLGSGDHCRPCPCPDGPGSERQFASGCYKDPTTLQVVCSCNMGYTGIR 952
Query: 195 CDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
CD C ++ E C+ C CN + ++ C G C +C + EG C+
Sbjct: 953 CDGCASGYFGNPEEIGGVCQPCHCNNNIDMSDSLACHKQSGLCLKCLYHTEGINCQ 1008
>gi|119905641|ref|XP_583244.3| PREDICTED: laminin subunit alpha-5 [Bos taurus]
Length = 3427
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 107/233 (45%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL C+ + +GP+C++CR Y+ G C AC C+P GS++ C + G C+C+PG
Sbjct: 597 AGRCL-CRPEFNGPHCDRCRLGYH---GYPECHACACDPRGSVDQLCGAGGLCRCRPGYA 652
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F + C C C+P GS+ CD GQC S R RV T LR
Sbjct: 653 GATCQECSPGFHGFPD--CAPCHCSPEGSLHAA--CDPHSGQC-----SCRPRV-TGLRC 702
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G + + ++ C C+ V G CDR
Sbjct: 703 DMCVPGAYNFP----------YCEAGSCHPAGLAPADRVPPEAQAPCTCRAHVEGPSCDR 752
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+P G++ C GQC CK +V G C +
Sbjct: 753 CKPGFWGLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNGQCFCKPHVCGQTCAA 805
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 98/259 (37%), Gaps = 59/259 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC G ++ C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 353 CNCYGHAHDCYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSPDH 412
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC + + GRC C+P TG +CD C DF C
Sbjct: 413 PLDSPHACRRCNCESDFTDGTCEDLTGRCYCRPNFTGARCDACAEGFTDF-----PHCYP 467
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P+ S +T G + S+ G GN C++D
Sbjct: 468 VPSSSHNDTGEQVLPAGHIVNCDCSAAGT---------------QGNA------CRKDP- 505
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G C CKP G C+ C Y GC+ C+C+ G V T
Sbjct: 506 -------------QVGHCVCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVVDGT-- 547
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC C+ EGA C
Sbjct: 548 CDRDSGQCTCRTGFEGAAC 566
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 113/265 (42%), Gaps = 46/265 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G C+ CQ + +G +CE+C+ + + ++ C +C
Sbjct: 1590 CQCHGHSDRCLPGS---------GVCIGCQHNTEGDHCERCQAGFVRTGSEDPAAPCISC 1640
Query: 58 NCN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNP 108
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1641 PCPLAVPSNNFATGCILRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSG 1700
Query: 109 AGSVKNT-PNCDSVKGQCESAQLSSRG--RVHTELRVQS-RKNFDPAGNRIWDLRRCKR- 163
G +CD + G C RG R T R +S F GN + C R
Sbjct: 1701 NGDPNMLFSDCDPLTGTC-------RGCLRHTTGPRCESCAPGF--YGNALLP-GNCTRC 1750
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSV 221
D P G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 1751 DCSPCGTEA-----CDPHSGHCLCKAGVTGLRCDRCQEGHFGFEGCEGCRPCACGPAA-- 1803
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCR 246
+ C GQC C+ G QCR
Sbjct: 1804 -ESSECHPQSGQCHCRPGTGGPQCR 1827
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+++ C G +C C+ V G C RC ++ F C+ C+C+ G +
Sbjct: 1169 CGCHEVGAMSPTCEPFGGQCPCRAHVIGRDCSRCATGYWGF--PSCRPCDCS--GRL--- 1221
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1222 --CDELTGQC----------------ICPPRTIPP------DCLVCQPQTFGCHPLVGCE 1257
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G ++ C+++ G+C+C+P V G +CD C + F C+ C+C+ AGS
Sbjct: 1258 ECNCSGPGVQELMDPTCDADSGQCKCRPNVAGRRCDTCAPGFHGF--PSCRPCDCHEAGS 1315
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
T CD + GQC CK+NV+G +C
Sbjct: 1316 APGT--CDPLTGQCYCKENVQGPRC 1338
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 94/236 (39%), Gaps = 54/236 (22%)
Query: 30 QGDRDGPNCEKCRDNYYQKSGDNFCTA-----CNCNPIGSLNLQCNSE---GRCQCKPGV 81
+G D P+C + + +G+ A C+C+ G+ C + G C CKP
Sbjct: 457 EGFTDFPHCYPVPSSSHNDTGEQVLPAGHIVNCDCSAAGTQGNACRKDPQVGHCVCKPNF 516
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G C+ C Y GC+ C+C+ G V T CD GQC
Sbjct: 517 QGTHCELCAPGFYG---PGCQPCQCSSPGVVDGT--CDRDSGQCTC-------------- 557
Query: 142 VQSRKNFDPAGNRIWDLRRCKR-----DTYPL------GHGGSLNLQCNSEGRCQCKPGV 190
R F+ A C R +PL G+L C+ GRC C+P
Sbjct: 558 ---RTGFEGAA--------CDRCAPGYFHFPLCQLCGCSPVGTLPEGCDDAGRCLCRPEF 606
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G CDRC + ++ + E C +C C+P GSV C + G C C+ GA C+
Sbjct: 607 NGPHCDRCRLGYHGYPE--CHACACDPRGSVDQL--CGA-GGLCRCRPGYAGATCQ 657
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 81/210 (38%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1698 CSGNGDPNMLFSDCDPLT-----GTCRGCLRHTTGPRCESCAPGFYGNALLPGNCTRCDC 1752
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
+P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA + C
Sbjct: 1753 SPCGTEACDPHS-GHCLCKAGVTGLRCDRCQEGHFGFEGCEGCRPCACGPAA---ESSEC 1808
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G QC
Sbjct: 1809 HPQSGQCHCR----------------------PGTGGPQCRECAPGHWGLPEQGCRRCQC 1846
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG+ G++C+ C H
Sbjct: 1847 QGGHCDLHTGRCTCPPGLGGERCETCSHQH 1876
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 23/147 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCN-SEGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT CNC+P G+L QC G+C CKP V G
Sbjct: 741 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNGQCFCKPHVCG 800
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC------------ESA 128
C C + +A GC+SC C+ G++ + C+ G C E A
Sbjct: 801 QTCAACKDGFFGLDQADYFGCRSCRCDVGGALGQS--CELRTGACMCRPNTQGSTCSEPA 858
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRI 155
Q +H LR++ + P G+ +
Sbjct: 859 QDHYLPDLH-HLRLELEEAATPEGHAV 884
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C H+ E GC+ C+C +CD G+C C +
Sbjct: 1813 GQCHCRPGTGGPQCRECAPGHWGLPEQGCRRCQCQGG-------HCDLHTGRCTCPPGLG 1865
Query: 242 GAQCRS 247
G +C +
Sbjct: 1866 GERCET 1871
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 70/190 (36%), Gaps = 22/190 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL---NLQCNSEGRCQCK 78
H G C C+ G C+ C Y +C A +C+P G + ++ C C+
Sbjct: 687 HSGQC-SCRPRVTGLRCDMCVPGAYNFP---YCEAGSCHPAGLAPADRVPPEAQAPCTCR 742
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
V G CDRC + + GC C C+P G++ C GQC +
Sbjct: 743 AHVEGPSCDRCKPGFWGLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNGQC-----FCKPH 797
Query: 136 VHTELRVQSRKNFDPAGNR-IWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGD 193
V + + F + R C+ D GG+L C G C C+P G
Sbjct: 798 VCGQTCAACKDGFFGLDQADYFGCRSCRCDV-----GGALGQSCELRTGACMCRPNTQGS 852
Query: 194 KCDRCDVNHY 203
C +HY
Sbjct: 853 TCSEPAQDHY 862
>gi|194332619|ref|NP_001123798.1| uncharacterized protein LOC100170549 [Xenopus (Silurana)
tropicalis]
gi|189441913|gb|AAI67592.1| LOC100170549 protein [Xenopus (Silurana) tropicalis]
Length = 1853
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 106/224 (47%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S +C FD +Y TG GG C DCQ + G NCE C+ YYQ DN
Sbjct: 349 CNCNNHSRKCHFDMAVYLATGKESGGVCDDCQHNTMGRNCELCKPFYYQDPRADIRADNA 408
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C +C+C+P+GSL+ C+S G+C+CK V G++CD C + Y G
Sbjct: 409 CISCDCDPVGSLDGGVCDSHTNVNLGMIAGQCRCKGNVKGERCDSCKESFYGLSMNDPVG 468
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C C+P G + CD + G C + + GR Q + N I R
Sbjct: 469 CQPCSCDPRGIITGNTPCDQISGDCYCKRFVT-GRYCN----QCLPEYWGLSNDITGCRP 523
Query: 161 CKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C D GG+ N +C+ +G+C C+ + G +C + ++
Sbjct: 524 CDCD-----FGGAYNNKCSLGDGQCDCRSNIIGRQCGDVQLGYF 562
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 24/187 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--------G 73
H G C+ C + DG +CE+C+ +Y + C C CN G+L C + G
Sbjct: 1059 HSGMCMKCLYNTDGAHCEECKAGFYGSAMQRNCRRCTCNEQGTLQSHCTRDVCYCDRVTG 1118
Query: 74 RCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C+ V G CD+C N ++F G+ GC+ C C+PA S++ +C+ GQC Q
Sbjct: 1119 HCPCRANVLGKSCDQCASNFWNFGGDLGCEPCTCDPAHSLRQ--DCNVFTGQCH-CQPGF 1175
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
GRV + ++N+ G+ C D Y GS QC+ G+C C+ G T
Sbjct: 1176 GGRVCS----HCQENY--WGDPQIKCEVCDCDAY-----GSETAQCDPLTGKCFCRKGFT 1224
Query: 192 GDKCDRC 198
G +CD+C
Sbjct: 1225 GQRCDQC 1231
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 116/272 (42%), Gaps = 51/272 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------C 54
C CNG S+ C G C+ C+ G +CEKC D YY GD C
Sbjct: 933 CVCNGHSDEC---------DSKTGACIRCRDSTTGRHCEKCLDGYY---GDPILGSGQQC 980
Query: 55 TACNCNPI-GSLNLQCNS--------EGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCK 102
C C GS N +S + C C PG TG +CDRC ++ E C+
Sbjct: 981 RPCPCPGYPGSRNYHGSSCYADKDSHQIVCLCAPGYTGTRCDRCSPGYFGNPEQEGGECR 1040
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
C+CN + +CDS G C ++ G H E + + F + + R C+
Sbjct: 1041 PCQCNNNIDPTDPESCDSHSGMCMKCLYNTDG-AHCE---ECKAGFYGSAMQ----RNCR 1092
Query: 163 RDTYPLGHGGSLNLQCNSE--------GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSC 213
R T G+L C + G C C+ V G CD+C N ++F G+ GC+ C
Sbjct: 1093 RCT--CNEQGTLQSHCTRDVCYCDRVTGHCPCRANVLGKSCDQCASNFWNFGGDLGCEPC 1150
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PA S++ +C+ GQC C+ G C
Sbjct: 1151 TCDPAHSLRQ--DCNVFTGQCHCQPGFGGRVC 1180
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 105/232 (45%), Gaps = 20/232 (8%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C Y G C+ C+C+P GS + CN G+C C+ V
Sbjct: 855 GGQC-KCKPNVIGQRCDQCAPGTY-GFGPYGCSKCDCHPQGSTSRLCNPFTGQCPCQSNV 912
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CD+C + G C+ C CN ++ CDS G C + S+ GR H E
Sbjct: 913 AGRQCDQCLPGQW--GYPHCRPCVCN-----GHSDECDSKTGACIRCRDSTTGR-HCEKC 964
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLG---HGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
+ DP R C YP HG S +S + C C PG TG +CDR
Sbjct: 965 LDGYYG-DPILGSGQQCRPCPCPGYPGSRNYHGSSCYADKDSHQIVCLCAPGYTGTRCDR 1023
Query: 198 CDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
C ++ E C+ C+CN + +CDS G C +C N +GA C
Sbjct: 1024 CSPGYFGNPEQEGGECRPCQCNNNIDPTDPESCDSHSGMCMKCLYNTDGAHC 1075
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ GSL+ C+ G +C+CKP V G +CD+C Y FG GC C+C+P GS
Sbjct: 839 CLCDLQGSLSAVCDKIGGQCKCKPNVIGQRCDQCAPGTYGFGPYGCSKCDCHPQGSTSRL 898
Query: 116 PNCDSVKGQC 125
C+ GQC
Sbjct: 899 --CNPFTGQC 906
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G++CD C + Y GC+ C C+P G + CD + G C CK
Sbjct: 438 GQCRCKGNVKGERCDSCKESFYGLSMNDPVGCQPCSCDPRGIITGNTPCDQISGDCYCKR 497
Query: 239 NVEGAQC 245
V G C
Sbjct: 498 FVTGRYC 504
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 103/260 (39%), Gaps = 42/260 (16%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNC 59
N + C+ DK+ H CL C G C++C Y+ Q+ G+ C C C
Sbjct: 993 NYHGSSCYADKD-----SHQIVCL-CAPGYTGTRCDRCSPGYFGNPEQEGGE--CRPCQC 1044
Query: 60 N----PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSV-- 112
N P + +S +C G C+ C Y + C+ C CN G++
Sbjct: 1045 NNNIDPTDPESCDSHSGMCMKCLYNTDGAHCEECKAGFYGSAMQRNCRRCTCNEQGTLQS 1104
Query: 113 ---KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL---RRCKRDTY 166
++ CD V G C R V K+ D + W+ C+ T
Sbjct: 1105 HCTRDVCYCDRVTGHC-----PCRANVLG-------KSCDQCASNFWNFGGDLGCEPCTC 1152
Query: 167 PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
H SL CN G+C C+PG G C C N++ + C+ C+C+ GS T
Sbjct: 1153 DPAH--SLRQDCNVFTGQCHCQPGFGGRVCSHCQENYWGDPQIKCEVCDCDAYGS--ETA 1208
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD + G+C C+ G +C
Sbjct: 1209 QCDPLTGKCFCRKGFTGQRC 1228
>gi|348577027|ref|XP_003474286.1| PREDICTED: usherin-like [Cavia porcellus]
Length = 5203
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 129/269 (47%), Gaps = 41/269 (15%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-- 52
C C+G + C ++ L + R G GG C CQ G NCE C D ++++ G +
Sbjct: 575 CQCHGHATSCHYNASLDPFPLEHGRGG-GGVCDACQHHTAGRNCELCEDYFFRQVGADPS 633
Query: 53 ---FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
C C+C+ G+ N L C+ G RC CK V+G +C++C Y E GC+
Sbjct: 634 AVDICKPCHCDGAGTRNGSLLCDQIGGRCNCKRHVSGRQCNQCHAGFYSLQELDPDGCRP 693
Query: 104 CECNPAGSVKNTPNCDSVKGQ--CESAQLSSR----GRVHTELRVQSRKNFDPAGNRIWD 157
C CN +G+ C GQ C++ + R L+ + + +P
Sbjct: 694 CSCNTSGTADGDITCHPNSGQCKCKANVIGLRCDHCNFGFKFLQSSNNEGCEP------- 746
Query: 158 LRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
C+ + + GS++ C+ G+C+CK V G +CDRC + Y GCK+C+C+
Sbjct: 747 ---CECNLH-----GSVSQICHPVSGQCECKRDVRGLRCDRCGEHFYGLDATGCKACKCH 798
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AGS+ T CD+ GQC CK NV G QC
Sbjct: 799 VAGSISGT-ICDAETGQCRCKPNVGGRQC 826
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 50/244 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQK-SGDNF-CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ + G C +C + Y+ + D+F C C+C+ G++N L C+ G+C C+ GVTG
Sbjct: 817 CKPNVGGRQCGECVEGYFSRWQNDSFRCLPCHCDKSGTVNGSLLCDKVTGQCPCRSGVTG 876
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
CD+C+ + Y+ G C CEC+ G++ T CD + GQC
Sbjct: 877 LLCDQCEPHRYNLTTEGHFQSCAMCECDSLGTLPGT-TCDRISGQCVCLP---------- 925
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTY--PLGHGGSLNLQCNSEG-----------RCQC 186
R Q R+ RC+ Y P G L C++ G +C C
Sbjct: 926 -RRQGRR-----------CDRCQAGFYIAPGNATGCLPCSCHTSGAAGRVCDGLTGQCLC 973
Query: 187 K-PGVTGDKCDRCDVNHYDF-GEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
+ VTG +CDRC +H+ F + G C+ C C+ +G++ T C V GQC CK V G
Sbjct: 974 QDTSVTGHRCDRCSDHHFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFCKQFVTGT 1031
Query: 244 QCRS 247
+C +
Sbjct: 1032 KCEA 1035
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 69/171 (40%), Gaps = 24/171 (14%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSL-NLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 94
CE R N + C C C+ +G+L C+ G+C C P G +CDRC Y
Sbjct: 881 QCEPHRYNLTTEGHFQSCAMCECDSLGTLPGTTCDRISGQCVCLPRRQGRRCDRCQAGFY 940
Query: 95 DF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR----VQSRKNF 148
GC C C+ +G+ CD + GQC S G R F
Sbjct: 941 IAPGNATGCLPCSCHTSGAAGRV--CDGLTGQCLCQDTSVTGH-----RCDRCSDHHFGF 993
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
DP R C+ L G+LN C+ G+C CK VTG KC+ C
Sbjct: 994 DPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGTKCEAC 1036
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 69/199 (34%), Gaps = 73/199 (36%)
Query: 1 CNCNGFSNRCFFDKE----------------------LYN----RTGHGGHCLDC----- 29
C C+G +NRC + LYN R G H C
Sbjct: 518 CQCHGHANRCDTRSQPYRCLCAQESFTHGLHCDRCLPLYNDKPFRAGDEAHAFACKPCQC 577
Query: 30 -------------------------------QGDRDGPNCEKCRDNYYQKSGD-----NF 53
Q G NCE C D ++++ G +
Sbjct: 578 HGHATSCHYNASLDPFPLEHGRGGGGVCDACQHHTAGRNCELCEDYFFRQVGADPSAVDI 637
Query: 54 CTACNCNPIGSLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C C+C+ G+ N L C+ GRC CK V+G +C++C Y E GC+ C CN
Sbjct: 638 CKPCHCDGAGTRNGSLLCDQIGGRCNCKRHVSGRQCNQCHAGFYSLQELDPDGCRPCSCN 697
Query: 108 PAGSVKNTPNCDSVKGQCE 126
+G+ C GQC+
Sbjct: 698 TSGTADGDITCHPNSGQCK 716
>gi|449480953|ref|XP_004177243.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-1 [Taeniopygia
guttata]
Length = 2043
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 109/224 (48%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG S++C FD +Y TG+ GG C DCQ + G NCE+C+ Y+Q +
Sbjct: 592 CNCNGHSSQCHFDMAVYMTTGNTSGGVCDDCQHNTMGRNCEQCKPFYFQHPERDLRDPDV 651
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C CNC+P GS N G+C+CK V G++CD C Y G
Sbjct: 652 CEPCNCDPAGSQNGGICDRYTDFSTGLIAGQCRCKLFVEGERCDLCKEGFYGLSADDPVG 711
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+SC CNP G+ CDS G C +L + + + L + D G R
Sbjct: 712 CQSCACNPLGTHPGGNPCDSETGNCYCKRLVTGKQCNQCLPEHWGLSNDMDG-----CRP 766
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+L+ C+SE G+C+C+P + G +C++ + +Y
Sbjct: 767 CDCD-----QGGALSNNCSSESGQCECRPHMFGRQCNQVEPGYY 805
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 110/282 (39%), Gaps = 68/282 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C+CNG ++ C + G CL C+ G NCE+C+ YY
Sbjct: 1124 CHCNGHADDC---------NPYTGECLSCRDHTAGHNCERCQAGYYGDPILGSGDHCRLC 1174
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGE 98
+SG F + C +P+ LQ C C G G +CD C + D
Sbjct: 1175 PCPDGPESGRQFASGCYQDPV---TLQV----VCVCSVGYIGSRCDECASGFFGSPDEVG 1227
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+CN + CD G C E+ L G + L+ RK
Sbjct: 1228 GACQPCQCNNNIDTTDPEACDKRTGACMKCLYHTEGENCHLCREGYYGSALQQDCRKCVC 1287
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF 205
N+ L + D GS + +C + G+C+C P V G CDRC + +
Sbjct: 1288 NY---------LGTVREDC-----EGSESCRCEAATGQCRCLPNVVGQTCDRCAPHTWRL 1333
Query: 206 GE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GC+ C+C+PA S+ P C+ GQC C G CR
Sbjct: 1334 ASGTGCEQCDCDPARSLG--PACNEFTGQCHCMPGFGGRTCR 1373
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + C++ + S TA C C+P GSL+ C+ G +CQC+P V G +C+RC
Sbjct: 1007 PMTDVCKNIIFSISALLHETALSCQCDPQGSLSSVCDPNGGQCQCRPNVVGRQCNRCAPG 1066
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GC+ CEC+ GS CD GQC
Sbjct: 1067 TFGFGPSGCRPCECHVRGSYNAF--CDVETGQC 1097
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 119/291 (40%), Gaps = 67/291 (23%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C D+E+ GHC+ C+ + G NCE+C D Y+ +
Sbjct: 528 CFCYGHASECAPVEGLDEEVEGMVH--GHCM-CRHNTKGLNCEQCLDFYHDLPWRPAEGR 584
Query: 50 GDNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN S + S G C C+ G C++C ++ E
Sbjct: 585 NSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVCDDCQHNTMGRNCEQCKPFYFQHPER 644
Query: 100 G------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
C+ C C+PAGS G C+ S G + Q R G
Sbjct: 645 DLRDPDVCEPCNCDPAGSQNG--------GICDRYTDFSTGLIAG----QCRCKLFVEGE 692
Query: 154 RIWDLRRCKRDTY----------------PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
R DL CK Y PLG N C+SE G C CK VTG +C+
Sbjct: 693 RC-DL--CKEGFYGLSADDPVGCQSCACNPLGTHPGGN-PCDSETGNCYCKRLVTGKQCN 748
Query: 197 RCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C H+ GC+ C+C+ G++ N NC S GQCEC+ ++ G QC
Sbjct: 749 QCLPEHWGLSNDMDGCRPCDCDQGGALSN--NCSSESGQCECRPHMFGRQC 797
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 93
G C++C + ++ + C C+C+P SL CN G+C C PG G C C
Sbjct: 1320 GQTCDRCAPHTWRLASGTGCEQCDCDPARSLGPACNEFTGQCHCMPGFGGRTCRECQELF 1379
Query: 94 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ C +C+CNP G TP CD GQC
Sbjct: 1380 WGDPGVECLACDCNPHGI--QTPQCDRATGQC 1409
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTG 83
HC+ G R C +C++ ++ G C AC+CNP G QC+ + G+C C GV G
Sbjct: 1362 HCMPGFGGR---TCRECQELFWGDPGVE-CLACDCNPHGIQTPQCDRATGQCICNEGVEG 1417
Query: 84 DKCDRCDVNHYDF 96
CD+C + F
Sbjct: 1418 LHCDKCSRGYSGF 1430
>gi|402857216|ref|XP_003919666.1| PREDICTED: LOW QUALITY PROTEIN: usherin, partial [Papio anubis]
Length = 2881
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 129/263 (49%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD---- 51
C CN S C+++ + + G GG C DC+ + G NCE C+D ++++ G
Sbjct: 333 CQCNSHSKSCYYNVSVDPFPFEHFRGGGGVCNDCEHNTTGRNCELCKDYFFRQVGADPSA 392
Query: 52 -NFCTACNCNPIGSLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C C+C+ +G+ N + C+ G+C CK V+G +C++C Y+ E GC C
Sbjct: 393 IDVCKPCDCDKVGARNGSILCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPC 452
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + + ++F+ G C+
Sbjct: 453 NCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDRCNFGFKFLRSFNDDG-----CEPCQC 507
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS+N CN G+C+C G +CD C N Y CK+C+C+ AGS+
Sbjct: 508 NLH-----GSVNKFCNPLSGQCECXKEAKGLQCDTCRENFYGLDVTNCKACDCDTAGSLP 562
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T C++ GQC CK NVEG QC
Sbjct: 563 GT-VCNAKTGQCICKPNVEGRQC 584
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + ++Y + ++F C CNC+ G++N L C+ S G+C CK
Sbjct: 571 GQCI-CKPNVEGRQCNKCLEGHFYLRQNNSFLCLPCNCDKAGTINGSLLCDKSTGQCPCK 629
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ GC+ CEC+ G++ T CD + GQC
Sbjct: 630 LGVTGLRCNQCEPHRYNLTIDNFQGCQMCECDSLGTLPGT-ICDPISGQC---------- 678
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G GS++ CNS
Sbjct: 679 ----LCVPNRQG-----------RRCNQCQPGFYISPGSANGCLPCSCHTAGSVHHICNS 723
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C ++ F C+ C C+ +G++ T C V GQC C
Sbjct: 724 LTGQCVCQDASIAGQRCDQCKDRYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 781
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 782 KQFVTGSKC 790
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 111/232 (47%), Gaps = 32/232 (13%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + D+ C C CN GS+N CN G+C+C G +
Sbjct: 475 CKANVIGLRCDRCNFGFKFLRSFNDDGCEPCQCNLHGSVNKFCNPLSGQCECXKEAKGLQ 534
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC------ESAQLSSRGRVHTE 139
CD C N Y CK+C+C+ AGS+ T C++ GQC E Q + H
Sbjct: 535 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQCICKPNVEGRQCNKCLEGHFY 593
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKCD 196
LR N + C D G++N L C+ S G+C CK GVTG +C+
Sbjct: 594 LR----------QNNSFLCLPCNCD-----KAGTINGSLLCDKSTGQCPCKLGVTGLRCN 638
Query: 197 RCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+ + Y+ GC+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 639 QCEPHRYNLTIDNFQGCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 689
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 628 CKLGVTGLRCNQCEPHRYNLTIDNFQGCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 687
Query: 85 KCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y G A GC C C+ AGSV + C+S+ GQC S G+ + +
Sbjct: 688 RCNQCQPGFYISPGSANGCLPCSCHTAGSVHHI--CNSLTGQCVCQDASIAGQRCDQCK- 744
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 745 DRYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 796
Query: 200 VNHYD 204
+H D
Sbjct: 797 ASHLD 801
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++C+D Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 726 GQCVCQDASIAGQRCDQCKDRYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 783
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 784 FVTGSKCDACVPSASHLD 801
>gi|390341663|ref|XP_784803.3| PREDICTED: laminin-like protein epi-1-like [Strongylocentrotus
purpuratus]
Length = 2921
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 97/223 (43%), Gaps = 50/223 (22%)
Query: 41 CRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
C N + + F C+C+ +GS+ L C S G +C CK G+ G CD C + F
Sbjct: 568 CLANVFSLTTFYFDGAQGCDCDLVGSVGLSCASYGGQCTCKGGIGGRTCDSCLPEFFSFR 627
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
GC SC+C V CD GQC + AG
Sbjct: 628 STGCTSCDCFGDDKV-----CDITTGQCNCPP-------------------NTAG----- 658
Query: 158 LRRCKR-DTYPLGHG-------------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH 202
RRC R T+ G GS++LQC+ + G+C CKPGVTG C C
Sbjct: 659 -RRCDRCVTFTWGLNSTTGCKECQCNPIGSVSLQCDQQTGQCPCKPGVTGQDCSECLPGF 717
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ GC C C+ +GS+ + CDSV GQC CK N EG QC
Sbjct: 718 KELSSEGCSPCVCDVSGSLSDV--CDSVTGQCICKSNTEGLQC 758
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 112/262 (42%), Gaps = 49/262 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------C 54
C CNG S+ C G CLDCQ + G NCE C D +Y GD C
Sbjct: 1028 CECNGHSSTC---------DPSNGQCLDCQDNSGGFNCEVCLDGFY---GDALSGTPDAC 1075
Query: 55 TACNCN-PIGSLNLQCNSEGRCQCK---PGVTGDKCDRCDVNHYDFGEAG-----CKSCE 105
AC C P NL + +G C+ PG C+ CD +Y G+ C+ CE
Sbjct: 1076 QACPCGPPTAQSNLCADIDGVVTCQDCFPGHLSPLCNICDDFYY--GQPANPGGFCQLCE 1133
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
CN NT +C+S+ G+C S+ G + +NF D + C D
Sbjct: 1134 CN-----GNTDSCNSLTGECVGCGFSTTG-----FNCERCQNFTYGNASQQDCQACNCD- 1182
Query: 166 YPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
GS +L C+ +C C PGV G +CD C N Y FG+ +GC C CN GS
Sbjct: 1183 ----PQGSSDLLCDHITSQCPCLPGVGGTRCDACLPNSYGFGDPSGCVECNCNEFGS--Q 1236
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD G C C V G +C
Sbjct: 1237 DLQCDG-GGVCSCLAGVLGVKC 1257
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C +C + G C++C + + C C CNPIGS++LQC+ + G+C CKPGVT
Sbjct: 648 GQC-NCPPNTAGRRCDRCVTFTWGLNSTTGCKECQCNPIGSVSLQCDQQTGQCPCKPGVT 706
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C C + GC C C+ +GS+ + CDSV GQC
Sbjct: 707 GQDCSECLPGFKELSSEGCSPCVCDVSGSLSDV--CDSVTGQC 747
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQ-CKPGV 81
C DC P C C D YY + + FC C CN G+ + CNS G C C
Sbjct: 1099 CQDCFPGHLSPLCNICDDFYYGQPANPGGFCQLCECN--GNTD-SCNSLTGECVGCGFST 1155
Query: 82 TGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TG C+RC ++ +G A C++C C+P GS + CD + QC L G
Sbjct: 1156 TGFNCERC--QNFTYGNASQQDCQACNCDPQGS--SDLLCDHITSQCPC--LPGVGGTRC 1209
Query: 139 ELRVQSRKNF-DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
+ + + F DP+G C + + GS +LQC+ G C C GV G KCD
Sbjct: 1210 DACLPNSYGFGDPSG-----CVECNCNEF-----GSQDLQCDGGGVCSCLAGVLGVKCDT 1259
Query: 198 CDVNHYDFGEAGCKSCECNPAGSVKNT-PNCDSVKGQCECKDNVEGAQC 245
C+ + + C +C C+ G+ + CD GQC CK + G C
Sbjct: 1260 CEDGSFGLPDQFCIACGCDATGTNDGSQAVCDVRSGQCPCKTGITGRLC 1308
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNC--DSVKGQCEC 236
G C CK V G KCD C +YD +A GC C+C AG+V + C DS GQC C
Sbjct: 257 GDCFCKVNVQGSKCDECLHGYYDLTDANTNGCLGCDCFTAGTVGGSEVCAKDS-TGQCPC 315
Query: 237 KDNVEGAQCR 246
K+ +G +C
Sbjct: 316 KEFTQGRRCE 325
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 13/109 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN F ++ + GG C G C+ C D + D FC AC C+
Sbjct: 1228 CNCNEFGSQ--------DLQCDGGGVCSCLAGVLGVKCDTCEDGSFGLP-DQFCIACGCD 1278
Query: 61 PIGS---LNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
G+ C+ G+C CK G+TG CD C +F GC C+
Sbjct: 1279 ATGTNDGSQAVCDVRSGQCPCKTGITGRLCDECRPGFINFSSDGCTKCD 1327
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 31/154 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQ-----GD------RDGPNCEK 40
CNC S+ C +++ + T GG C+DC+ GD G C++
Sbjct: 213 CNCFSHSDVCQYNESVAAMTSSLNAAGEYIGGGVCMDCRDNTLPGDCFCKVNVQGSKCDE 272
Query: 41 CRDNYYQKSGDNF--CTACNCNPIGSL--NLQC--NSEGRCQCKPGVTGDKCDRCDVNHY 94
C YY + N C C+C G++ + C +S G+C CK G +C+ C +Y
Sbjct: 273 CLHGYYDLTDANTNGCLGCDCFTAGTVGGSEVCAKDSTGQCPCKEFTQGRRCEECQDGYY 332
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
D + GC +C+C+ G+ + CD G+C
Sbjct: 333 GLSDTSQEGCSNCQCDVGGAENSV--CDKTDGEC 364
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 179 NSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
+S G+C CK G +C+ C +Y D + GC +C+C+ G+ + CD G+C
Sbjct: 308 DSTGQCPCKEFTQGRRCEECQDGYYGLSDTSQEGCSNCQCDVGGAENSV--CDKTDGECT 365
Query: 236 CKDNVEGAQCRS 247
C+ V G +C S
Sbjct: 366 CRSRVTGRRCDS 377
>gi|410965322|ref|XP_003989199.1| PREDICTED: LOW QUALITY PROTEIN: netrin-4 [Felis catus]
Length = 682
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD +++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 386 CKCNGHADACHFDIKVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 445
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FG GC+ C+C
Sbjct: 446 CKKCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGNYGCRPCDC 505
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 506 --AGS------CDPLTGDCISS 519
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG GC+ C+C AGS CD + G C
Sbjct: 470 SNGDCPCKPGVAGPHCDRCMVGYWGFGNYGCRPCDC--AGS------CDPLTGDC 516
>gi|345781072|ref|XP_003432077.1| PREDICTED: netrin-4 isoform 1 [Canis lupus familiaris]
Length = 591
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 295 CKCNGHADTCHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 354
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 355 CKMCSCHPVGSAALPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 414
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 415 --AGS------CDPLTGDCISS 428
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 379 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 425
>gi|313151244|ref|NP_001186242.1| laminin subunit beta-4 [Gallus gallus]
Length = 1773
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 32/217 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNCNG S RC FD +Y +G GG C DCQ + G +C++C+ +YQ S +
Sbjct: 354 CNCNGHSGRCHFDMAVYQASGGVSGGVCEDCQHNTTGHHCDQCKLFFYQDPHKAISDPHA 413
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C C+CNP G+L+ + GRC CK V G CD+C NH+ G
Sbjct: 414 CLPCSCNPEGTLHHGACESHTDPVLGTVAGRCLCKENVEGVHCDKCKANHFGLRGSDPLG 473
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C C+ AG++ + CDS G+C Q ++ R + + + G ++
Sbjct: 474 CQPCNCDAAGTLPFS-VCDSTTGECLCQQFTTGRRCE-----KCVEGYWGLGKSVYGCSP 527
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
C D GGS + C+ E G+C+C P + G +C+
Sbjct: 528 CDCDI-----GGSQDNLCSPEDGQCKCLPNIVGRQCN 559
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 113/266 (42%), Gaps = 39/266 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C C+GF+ C G CL+C G +CE+C D YY S C C C
Sbjct: 887 CACHGFAELCH---------PVTGECLNCSRFTAGSHCERCIDGYYGNPSNREPCRPCMC 937
Query: 60 NPIGS----LNLQC-----NSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAG--CKSCECN 107
+ + C S+ C C G +G++CD C Y G G C C CN
Sbjct: 938 PGVPTSKRFFAHSCYQDSQTSQIVCNCLEGYSGNRCDECPSGFYKIPGSPGEECAPCPCN 997
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C+ V G+C ++ G + F A N+ D R CK
Sbjct: 998 NNIDVTDPESCNRVTGECVKCLHNTHG---ANCQFCKPGYFGSALNQ--DCRICKCNPAG 1052
Query: 165 TYPLG-HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSV 221
P GG C+ + G C C+P V G CD+C ++D G GC+ C+C+ +
Sbjct: 1053 VLPATCPGGDATCLCDPATGACLCQPNVVGTTCDQCAPGYWDLAGGKGCQLCDCD----L 1108
Query: 222 KNTPN--CDSVKGQCECKDNVEGAQC 245
KNT + CD + GQC+CK G +C
Sbjct: 1109 KNTQSNQCDQLTGQCQCKVGYGGKRC 1134
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 55 TACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
AC CNP GSLN C+ G +C CK V G CD C Y FG GC CEC+P GSV
Sbjct: 791 VACKCNPQGSLNASCSRLGGQCHCKANVVGRCCDTCSAGSYGFGFHGCYPCECHPQGSVS 850
Query: 114 NTPNCDSVKGQC 125
+ CD V GQC
Sbjct: 851 SL--CDQVTGQC 860
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL CQ + G C++C Y+ +G C C+C+ + + QC+ G+CQCK G
Sbjct: 1072 GACL-CQPNVVGTTCDQCAPGYWDLAGGKGCQLCDCDLKNTQSNQCDQLTGQCQCKVGYG 1130
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +CD C+ N++ + C SC CNP G+ N P CD G C
Sbjct: 1131 GKRCDECEENYFGNPQKHCISCNCNPEGT--NWPQCDKATGVC 1171
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSLN C+ G +C CK V G CD C Y FG GC CEC+P GSV + CD V
Sbjct: 799 GSLNASCSRLGGQCHCKANVVGRCCDTCSAGSYGFGFHGCYPCECHPQGSVSSL--CDQV 856
Query: 231 KGQCECKDNVEGAQC 245
GQC C +V+G +C
Sbjct: 857 TGQCACLRDVDGRRC 871
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 86/201 (42%), Gaps = 54/201 (26%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN----------SEG 73
G C+ C + G NC+ C+ Y+ + + C C CNP G L C + G
Sbjct: 1013 GECVKCLHNTHGANCQFCKPGYFGSALNQDCRICKCNPAGVLPATCPGGDATCLCDPATG 1072
Query: 74 RCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPN--CDSVKGQCESAQL 130
C C+P V G CD+C ++D G GC+ C+C+ +KNT + CD + GQC
Sbjct: 1073 ACLCQPNVVGTTCDQCAPGYWDLAGGKGCQLCDCD----LKNTQSNQCDQLTGQC----- 1123
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PLGHGGSLNLQCNSEGR----- 183
Q + + G + D C+ + + P H S N CN EG
Sbjct: 1124 ------------QCKVGY---GGKRCD--ECEENYFGNPQKHCISCN--CNPEGTNWPQC 1164
Query: 184 ------CQCKPGVTGDKCDRC 198
C C+ GVTG CD+C
Sbjct: 1165 DKATGVCNCRAGVTGRFCDQC 1185
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 122/290 (42%), Gaps = 63/290 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHG-----GHCLDCQGDRDGPNCEKCRDNY-------YQK 48
C CNG ++ C + L H G C+ C + +G +CE+C+D Y +
Sbjct: 287 CFCNGHASHCDPIQNLRGDVFHQPGMVHGRCI-CHHNTEGLSCERCKDFYNDAPWRPAEG 345
Query: 49 SGDNFCTACNCN------PIGSLNLQCN---SEGRCQ-CKPGVTGDKCDRCDVNHY-DFG 97
+ +N C CNCN Q + S G C+ C+ TG CD+C + Y D
Sbjct: 346 TQNNACKRCNCNGHSGRCHFDMAVYQASGGVSGGVCEDCQHNTTGHHCDQCKLFFYQDPH 405
Query: 98 EA-----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
+A C C CNP G++ + G CES G V R ++N +
Sbjct: 406 KAISDPHACLPCSCNPEGTLHH--------GACESHTDPVLGTVAG--RCLCKENVEGV- 454
Query: 153 NRIWDLRRCKRDTY------PLG-------HGGSLNLQC--NSEGRCQCKPGVTGDKCDR 197
+CK + + PLG G+L ++ G C C+ TG +C++
Sbjct: 455 ----HCDKCKANHFGLRGSDPLGCQPCNCDAAGTLPFSVCDSTTGECLCQQFTTGRRCEK 510
Query: 198 CDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C ++ G++ GC C+C+ GS N C GQC+C N+ G QC
Sbjct: 511 CVEGYWGLGKSVYGCSPCDCDIGGSQDNL--CSPEDGQCKCLPNIVGRQC 558
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 108/268 (40%), Gaps = 43/268 (16%)
Query: 1 CNCNGF-SNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTAC 57
C C G +++ FF Y + +C G C++C +Y+ G C C
Sbjct: 935 CMCPGVPTSKRFFAHSCYQDSQTSQIVCNCLEGYSGNRCDECPSGFYKIPGSPGEECAPC 994
Query: 58 NCNPIGSLNL----QCN-SEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
CN ++++ CN G C +C G C C + FG A C+ C+CNP
Sbjct: 995 PCN--NNIDVTDPESCNRVTGECVKCLHNTHGANCQFCKPGY--FGSALNQDCRICKCNP 1050
Query: 109 AGSVKNT-PN------CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
AG + T P CD G C L V T + +D AG + L C
Sbjct: 1051 AGVLPATCPGGDATCLCDPATGAC----LCQPNVVGTTCDQCAPGYWDLAGGKGCQLCDC 1106
Query: 162 KRDTYPLGHGGSLNLQCNS----EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
N Q N G+CQCK G G +CD C+ N++ + C SC CNP
Sbjct: 1107 DLK----------NTQSNQCDQLTGQCQCKVGYGGKRCDECEENYFGNPQKHCISCNCNP 1156
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ N P CD G C C+ V G C
Sbjct: 1157 EGT--NWPQCDKATGVCNCRAGVTGRFC 1182
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 99/242 (40%), Gaps = 40/242 (16%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C+ C Y G + C C C+P GS++ C+ G+C C V
Sbjct: 809 GGQC-HCKANVVGRCCDTCSAGSY-GFGFHGCYPCECHPQGSVSSLCDQVTGQCACLRDV 866
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +C +C + FG C+ C C+ + C V G+C + + G H E
Sbjct: 867 DGRRCSQCLPGY--FGFPHCRPCACHGFAEL-----CHPVTGECLNCSRFTAGS-HCERC 918
Query: 142 VQSR----KNFDP---------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
+ N +P ++ + C +D+ S+ C C
Sbjct: 919 IDGYYGNPSNREPCRPCMCPGVPTSKRFFAHSCYQDSQ------------TSQIVCNCLE 966
Query: 189 GVTGDKCDRCDVNHYDF-GEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQ 244
G +G++CD C Y G G C C CN V + +C+ V G+C +C N GA
Sbjct: 967 GYSGNRCDECPSGFYKIPGSPGEECAPCPCNNNIDVTDPESCNRVTGECVKCLHNTHGAN 1026
Query: 245 CR 246
C+
Sbjct: 1027 CQ 1028
>gi|348580327|ref|XP_003475930.1| PREDICTED: netrin-4-like [Cavia porcellus]
Length = 633
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 31/169 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C C+G ++ C FD ++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 337 CKCSGHADTCHFDINVWTASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 396
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 397 CKVCSCHPVGSAVLPFSSVIFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 456
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR-KNFDPAGNR 154
AGS CD + G C S+ HT+L +F PA N+
Sbjct: 457 --AGS------CDPLTGDCISS--------HTDLDWHHEIPDFSPAHNK 489
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 421 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 467
>gi|344270450|ref|XP_003407057.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-4-like
[Loxodonta africana]
Length = 1842
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 109/249 (43%), Gaps = 38/249 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
CNCNG S+RC FD +Y +G GG DCQ +G +C++CR +Y+ S
Sbjct: 331 CNCNGHSDRCHFDMTVYLASGGLSGGVWEDCQHHTEGQHCDRCRPLFYRDPLKPISDPYT 390
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+L+ + G+C CK V G KC+RC NHY + G
Sbjct: 391 CIPCECDPDGTLSGGICVSHSDPALASVAGQCLCKENVEGTKCNRCKPNHYGLSASDPLG 450
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+SC CNP GS+ CD GQC ++ H E + GNR
Sbjct: 451 CQSCNCNPLGSLPFL-TCDVDTGQCLCQSFATGP--HCE---DYTVGYWGLGNRPHGCSP 504
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR-------CDVNHYDF-GEAGCKS 212
C D G LN +G+C+C+P +TG C +N Y + E
Sbjct: 505 CDCDI----GGAYLNTCSLRDGQCECRPHITGRSCTEPAPGYFFAPLNFYLYEAEEATPL 560
Query: 213 CECNPAGSV 221
P+GSV
Sbjct: 561 QSLAPSGSV 569
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N AC C+P GS+ C+ G +CQC+PGV G CDRC Y G GC+SC C+P G
Sbjct: 763 NGAVACKCHPQGSVGASCSRLGGQCQCRPGVEGRCCDRCSAGSYGLGHHGCRSCHCHPQG 822
Query: 111 SVKNTPNCDSVKGQC 125
S KN+ CD + GQC
Sbjct: 823 S-KNS-LCDQITGQC 835
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 91/233 (39%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + GPNC+ C+ ++ + + C C+C+P G +C S G
Sbjct: 988 GECLRCLHNTQGPNCQFCKPGHFGSALNQTCRRCSCHPSGVNPAKCPSGQGPCLCDPATG 1047
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDR +++ C+ C+C+P S + +CD + GQC
Sbjct: 1048 SCPCLPNVTGLACDRXADGYWNLVPGRRCRLCDCDPQTS--QSSHCDQLTGQCP------ 1099
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1100 ----------------------------CK-----LGYGGK------------------- 1107
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+ C N++ C SC+CN G+ TP CD G+C C++ V G +C
Sbjct: 1108 -RCNECKENYFGNPPGPCVSCDCNREGT--QTPACDQNTGRCRCREGVXGQRC 1157
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 110/270 (40%), Gaps = 47/270 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C G G NCE+C D YY S C +C C
Sbjct: 862 CPCNGFAELC--DPE-------TGSCFNCGGFTTGRNCERCVDGYYGTPSSGQSCRSCLC 912
Query: 60 NPIGSLNL---------QCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G G +C+ C Y A C+ C CN
Sbjct: 913 PDAPSSNQYFAHSCFQNPWSSDVICNCLQGYAGIQCEECSAGFYRNPRISGALCRPCGCN 972
Query: 108 PAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK-NFDPAGNRIWD 157
V + C V G+C + Q G + L R+ + P+G +
Sbjct: 973 KNIDVTDPEACSRVTGECLRCLHNTQGPNCQFCKPGHFGSALNQTCRRCSCHPSG---VN 1029
Query: 158 LRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCEC 215
+C P G G L C+ + G C C P VTG CDR +++ C+ C+C
Sbjct: 1030 PAKC-----PSGQGPCL---CDPATGSCPCLPNVTGLACDRXADGYWNLVPGRRCRLCDC 1081
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+P S + +CD + GQC CK G +C
Sbjct: 1082 DPQTS--QSSHCDQLTGQCPCKLGYGGKRC 1109
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQC+PGV G CDRC Y G GC+SC C+P GS KN+ CD + GQC C V
Sbjct: 785 GQCQCRPGVEGRCCDRCSAGSYGLGHHGCRSCHCHPQGS-KNS-LCDQITGQCPCHGEVA 842
Query: 242 GAQC 245
G C
Sbjct: 843 GHHC 846
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 91/249 (36%), Gaps = 82/249 (32%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSG--------DNFCTACNCNPIGS-----LNLQCN 70
G C+ CQ + GPNCE+C+D ++Q + ++ C CNCN + +
Sbjct: 292 GQCI-CQHNTGGPNCERCKD-FFQDAPWRPAEGPQNSTCRPCNCNGHSDRCHFDMTVYLA 349
Query: 71 SEGRC-----QCKPGVTGDKCDRCDVNHY------DFGEAGCKSCECNPAGSVKNTPNCD 119
S G C+ G CDRC Y C CEC+P G++
Sbjct: 350 SGGLSGGVWEDCQHHTEGQHCDRCRPLFYRDPLKPISDPYTCIPCECDPDGTLSG----- 404
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
G C S + DPA +
Sbjct: 405 ---GICVS-------------------HSDPALASV------------------------ 418
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C CK V G KC+RC NHY + GC+SC CNP GS+ CD GQC C
Sbjct: 419 -AGQCLCKENVEGTKCNRCKPNHYGLSASDPLGCQSCNCNPLGSLPFL-TCDVDTGQCLC 476
Query: 237 KDNVEGAQC 245
+ G C
Sbjct: 477 QSFATGPHC 485
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 94/241 (39%), Gaps = 38/241 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ +G C++C Y G + C +C+C+P GS N C+ G+C C V
Sbjct: 784 GGQC-QCRPGVEGRCCDRCSAGSY-GLGHHGCRSCHCHPQGSKNSLCDQITGQCPCHGEV 841
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR------ 135
G C +C + FG C C CN + CD G C + + GR
Sbjct: 842 AGHHCHQCLAGY--FGFPNCHPCPCNGFAEL-----CDPETGSCFNCGGFTTGRNCERCV 894
Query: 136 ---VHTELRVQSRKN---FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG 189
T QS ++ D + + C ++ + +S+ C C G
Sbjct: 895 DGYYGTPSSGQSCRSCLCPDAPSSNQYFAHSCFQNPW------------SSDVICNCLQG 942
Query: 190 VTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
G +C+ C Y A C+ C CN V + C V G+C C N +G C
Sbjct: 943 YAGIQCEECSAGFYRNPRISGALCRPCGCNKNIDVTDPEACSRVTGECLRCLHNTQGPNC 1002
Query: 246 R 246
+
Sbjct: 1003 Q 1003
>gi|395539189|ref|XP_003771555.1| PREDICTED: laminin subunit beta-1 [Sarcophilus harrisii]
Length = 1786
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 106/224 (47%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ N
Sbjct: 335 CNCNEHSGSCHFDMAVYLATGNISGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNI 394
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C AC C+P GS N C+S G+C+CK G+KCD C Y G
Sbjct: 395 CEACTCDPAGSQNGGICDSYTDFSAGLIAGQCRCKLYTEGEKCDICKEGFYGLSADDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+SC CNP G++ CDS G C +L + H + +Q N + R
Sbjct: 455 CQSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQ--HCDQCLQEHWGL---SNDLDGCRP 509
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GGSLN C++E G+C C+ + G +C+ + +Y
Sbjct: 510 CDCDV-----GGSLNNNCSAESGQCLCRSHMIGRQCNEVESGYY 548
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 105/280 (37%), Gaps = 67/280 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G C CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DPISGECFGCQDYTSGHNCERCLPGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
+SG F C +PI +L L C C PG G +CD C ++ + G+ G
Sbjct: 918 PCPDGPESGRQFANTCYQDPI-TLQL------VCVCNPGYLGARCDECASGYFGNPGDVG 970
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK--- 146
C+ C+C+ + +CD G+C E+ QL G LR RK
Sbjct: 971 GVCQPCQCHNNIDTTDPESCDKGTGRCLKCLYHTEGENCQLCKFGYYGDALRQDCRKCVC 1030
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 206
N+ D C+ D G+C C P V G CD C N ++
Sbjct: 1031 NYLGTVQEHCDGSDCQCDKI--------------TGQCLCLPNVIGQNCDHCAPNTWNLA 1076
Query: 207 E-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+ A S P+C+ GQC+C G C
Sbjct: 1077 SGMGCEPCSCDAAHSFG--PSCNEFTGQCQCMPGFGGRTC 1114
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK C+C+ GS+ CD V GQC
Sbjct: 810 TFGFGPNGCKPCDCHMQGSINAF--CDPVTGQC 840
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 117/262 (44%), Gaps = 57/262 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNP------------IGS 64
GHC+ C+ + G NCE C D Y+ + N C CNCN + +
Sbjct: 296 GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSGSCHFDMAVYLAT 354
Query: 65 LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPN 117
N+ S G C C+ G C++C +Y E C++C C+PAGS +N
Sbjct: 355 GNI---SGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNICEACTCDPAGS-QNGGI 410
Query: 118 CDS--------VKGQCESAQLSSRGRVHTELR---VQSRKNFDPAGNRIWDLRRCKRDTY 166
CDS + GQC R +++TE + + + + + + C +
Sbjct: 411 CDSYTDFSAGLIAGQC-------RCKLYTEGEKCDICKEGFYGLSADDPFGCQSCACN-- 461
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKN 223
PLG N C+SE G C CK VTG CD+C H+ GC+ C+C+ GS+ N
Sbjct: 462 PLGTIPGGN-PCDSETGYCYCKRLVTGQHCDQCLQEHWGLSNDLDGCRPCDCDVGGSLNN 520
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
NC + GQC C+ ++ G QC
Sbjct: 521 --NCSAESGQCLCRSHMIGRQC 540
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 101/237 (42%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS+N C+ G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPNGCKPCDCHMQGSINAFCDPVTGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CD + G+C Q + G H R
Sbjct: 847 YTRQCDRCLPGYWGF--PNCQPCQCN-----GHADDCDPISGECFGCQDYTSG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
DP R C R + + LQ C C PG G
Sbjct: 898 CLPGYYGDPIIGSGDHCRPCPCPDGPESGRQFANTCYQDPITLQL----VCVCNPGYLGA 953
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C ++ + G+ G C+ C+C+ + +CD G+C +C + EG C+
Sbjct: 954 RCDECASGYFGNPGDVGGVCQPCQCHNNIDTTDPESCDKGTGRCLKCLYHTEGENCQ 1010
>gi|291394202|ref|XP_002713650.1| PREDICTED: laminin alpha 3 subunit [Oryctolagus cuniculus]
Length = 3570
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 109/233 (46%), Gaps = 34/233 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + CN E G+C+C+PG+T
Sbjct: 736 GRCL-CRPGVEGPRCDACRSGFYSFP---ICPACQCSALGSYPVPCNPETGQCECQPGIT 791
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC + +DF S C+PAG+ ++ + K ES S ++
Sbjct: 792 GRQCDRCLLGAFDFPHCQASSLACDPAGTTDSSLDYCQCKLHVESPTCSICKPLY----- 846
Query: 143 QSRKNFDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
W+L + D + G + +G C CK VTGD CD
Sbjct: 847 -------------WNLVKENPDGCSECQCHEAGTASGIGECGQGDGDCSCKLHVTGDACD 893
Query: 197 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C+ ++ ++ GC+ C C+ G++ T C G+C C+++V G C+
Sbjct: 894 TCEDGYFALEKSNYFGCQGCRCDVGGAL--TTMCSGPSGECPCREHVAGEACQ 944
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 111/259 (42%), Gaps = 62/259 (23%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D +E N G GG C+ CQ + G NCEKC YY+ G
Sbjct: 585 CNCHGHAIDCYYDPGVEQRQESLNTQGVYAGGGVCISCQHNTAGVNCEKCAKGYYRPFGV 644
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+C+P + + S GRC CKP GD C++C +Y F
Sbjct: 645 PTDAPHGCIPCSCDPERADGCEQGS-GRCHCKPNFHGDHCEKCADGYYHF---------- 693
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P C + LSS + + DP D++ C D
Sbjct: 694 ---------PLCSRI--------LSSPTSISSPE--------DPVAG---DIKGCDCDL- 724
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G L C++ GRC C+PGV G +CD C Y F C +C+C+ GS
Sbjct: 725 ----EGVLPEICDAHGRCLCRPGVEGPRCDACRSGFYSF--PICPACQCSALGSYPVP-- 776
Query: 227 CDSVKGQCECKDNVEGAQC 245
C+ GQCEC+ + G QC
Sbjct: 777 CNPETGQCECQPGITGRQC 795
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 91/210 (43%), Gaps = 51/210 (24%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P G+ + QC+ EG +C C+ V G +C RC + +Y F CK C C
Sbjct: 1493 NGALPCECHPAGATSPQCSPEGGQCPCRANVIGRQCSRCAMGYYGFPR--CKPCNCGQRL 1550
Query: 111 SVKNTPNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-----------GNRI 155
+ T C +++ QCE+ ++ S +F P G +
Sbjct: 1551 CEETTGQCLCPPRTIRPQCEACEMHSF-------------SFHPLAGCEGCNCSTRGTIV 1597
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
C RD+ G+C+CKP VTG +CD+C Y F E C C C
Sbjct: 1598 AATPECDRDS----------------GQCRCKPRVTGRQCDQCASGFYHFPE--CVPCSC 1639
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N G+ CD G C CK+NVEGA+C
Sbjct: 1640 NRDGTEPGV--CDPRTGACLCKENVEGAEC 1667
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G SNRC G C++CQ + G +CE+C++ YY + C+AC C
Sbjct: 1919 CNCHGHSNRC---------QDGTGICINCQHNTAGDHCERCKEGYYGNAVLGHCSACPCP 1969
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CKPG G +C+RC ++ FG C+ C CN G +
Sbjct: 1970 HTNSFATGCVVNGGNVRCSCKPGYMGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGHLG 2028
Query: 114 NTPNCDSVKGQC 125
+CD + G C
Sbjct: 2029 ---SCDPLTGDC 2037
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 71/170 (41%), Gaps = 24/170 (14%)
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
P + C + F G CEC+PAG+ +P C GQC R +
Sbjct: 1473 PKTASEFCRNSARSLVAFYHNGALPCECHPAGA--TSPQCSPEGGQCPC-------RANV 1523
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRCQCKPGVTGDKCDR 197
R SR + RCK P G L C + G+C C P +C+
Sbjct: 1524 IGRQCSR-----CAMGYYGFPRCK----PCNCGQRL---CEETTGQCLCPPRTIRPQCEA 1571
Query: 198 CDVNHYDFGE-AGCKSCECNPAGS-VKNTPNCDSVKGQCECKDNVEGAQC 245
C+++ + F AGC+ C C+ G+ V TP CD GQC CK V G QC
Sbjct: 1572 CEMHSFSFHPLAGCEGCNCSTRGTIVAATPECDRDSGQCRCKPRVTGRQC 1621
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL---NLQCNSE-GRCQCKP 79
G CL C P CE C + + C CNC+ G++ +C+ + G+C+CKP
Sbjct: 1556 GQCL-CPPRTIRPQCEACEMHSFSFHPLAGCEGCNCSTRGTIVAATPECDRDSGQCRCKP 1614
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C Y F E C C CN G+ CD G C
Sbjct: 1615 RVTGRQCDQCASGFYHFPE--CVPCSCNRDGTEPGV--CDPRTGAC 1656
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 81/204 (39%), Gaps = 38/204 (18%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ + G C +C YY G C CNC L + G+C C P
Sbjct: 1514 GGQC-PCRANVIGRQCSRCAMGYY---GFPRCKPCNCGQ----RLCEETTGQCLCPPRTI 1565
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGS-VKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+C+ C+++ + F AGC+ C C+ G+ V TP CD GQC
Sbjct: 1566 RPQCEACEMHSFSFHPLAGCEGCNCSTRGTIVAATPECDRDSGQCRCKP----------- 1614
Query: 141 RVQSRKNFDPAGNRIWDLRRC-----KRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDK 194
RV R+ D + + C RD G+ C+ G C CK V G +
Sbjct: 1615 RVTGRQC-DQCASGFYHFPECVPCSCNRD-------GTEPGVCDPRTGACLCKENVEGAE 1666
Query: 195 CDRCDVNHYDFGEA---GCKSCEC 215
C+ C + A GC SC C
Sbjct: 1667 CNMCRAGSFYLDPANPKGCTSCFC 1690
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G C+ C D Y+ N+ C C C+ G+L C+ G C C+ V G+
Sbjct: 883 CKLHVTGDACDTCEDGYFALEKSNYFGCQGCRCDVGGALTTMCSGPSGECPCREHVAGEA 942
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 943 CQRPEKNYY 951
>gi|301767738|ref|XP_002919283.1| PREDICTED: netrin-4-like [Ailuropoda melanoleuca]
Length = 627
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CRMCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCISS 465
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C +
Sbjct: 416 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDCISSTD 467
Query: 240 VE 241
++
Sbjct: 468 ID 469
>gi|351697527|gb|EHB00446.1| Usherin [Heterocephalus glaber]
Length = 3949
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 125/263 (47%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKE-----LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C C+ S C +D L G GG C CQ G NCE C+D ++++ G
Sbjct: 574 CQCHNHSTSCHYDASVDPFPLELGRGGGGVCDACQHHTAGRNCELCKDYFFREVGAEPSA 633
Query: 51 DNFCTACNCNPIG--SLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C C+C P G S +L C+ G+C CK V+G +C++C Y E+ GC C
Sbjct: 634 ADVCKPCDCEPAGTKSGSLSCDQTGGQCNCKRHVSGRQCNQCQAGFYSLRESDADGCSPC 693
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+ +G+V C GQC+ A ++ + ++F+ G C+
Sbjct: 694 GCSTSGTVDGDITCHPDSGQCKCKANVTGLKCDQCSFGFKFLRSFNDDG-----CGPCQC 748
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS+N C+ G+C CK G +CD C N Y GCK+CEC+ AGSV
Sbjct: 749 NLH-----GSVNKACDPFSGQCDCKDEARGLQCDTCRENFYGLDATGCKACECDAAGSVP 803
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK ++ G QC
Sbjct: 804 GT-VCDAETGQCVCKPSIGGRQC 825
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 113/230 (49%), Gaps = 28/230 (12%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + D+ C C CN GS+N C+ G+C CK G +
Sbjct: 716 CKANVTGLKCDQCSFGFKFLRSFNDDGCGPCQCNLHGSVNKACDPFSGQCDCKDEARGLQ 775
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ-- 143
CD C N Y GCK+CEC+ AGSV T CD+ GQC + S GR Q
Sbjct: 776 CDTCRENFYGLDATGCKACECDAAGSVPGT-VCDAETGQC-VCKPSIGGR-------QCE 826
Query: 144 --SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKCDRC 198
+F A N + C DT G++N L C+ + G+C CKPGVTG C++C
Sbjct: 827 DCLEGSFYLAQNDSFLCLPCDCDT-----SGTVNGSLVCDKATGQCPCKPGVTGLPCNQC 881
Query: 199 DVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ + Y+ GC++C+C+ G+ T CD V GQC C N G C
Sbjct: 882 EPHRYNLTTGSFQGCRTCDCDSLGTFPGT-TCDPVSGQCWCLPNRRGRTC 930
>gi|326435939|gb|EGD81509.1| laminin alpha 5 chain [Salpingoeca sp. ATCC 50818]
Length = 5486
Score = 86.7 bits (213), Expect = 7e-15, Method: Composition-based stats.
Identities = 59/183 (32%), Positives = 81/183 (44%), Gaps = 19/183 (10%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNSEGRCQCKP 79
G G C C G C C D ++ + + C AC C+ G+ + C+++G C CK
Sbjct: 636 GDAGTCA-CVSPYIGSTCTACIDTFFFNASTSTCQACACDDDGASEARTCDAQGVCTCKA 694
Query: 80 GVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G TGDKCD C Y +G C +C CN AG+ + T CD GQC HT
Sbjct: 695 GYTGDKCDACADGFYRSAASGLCVACACNTAGTEQGTAVCDKATGQCPCTS------THT 748
Query: 139 ELRV-QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG--VTGDKC 195
+ ++ N+ C D GS++ C+S+G C C G GDKC
Sbjct: 749 SRDCGECVDSYYLLPNQTCAACSCFAD-------GSVSSSCDSDGVCMCVQGGDYVGDKC 801
Query: 196 DRC 198
D C
Sbjct: 802 DVC 804
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 67/239 (28%), Positives = 86/239 (35%), Gaps = 26/239 (10%)
Query: 26 CLDCQGDRDGPNCEKCR---DNYYQKSGDNF----CTACNCNPIGS---LNLQCNSEGRC 75
C C + G C +C +N G F C C CN S N N+
Sbjct: 521 CDMCAHNTQGDQCGQCAPLFNNAPFARGTGFETNACDMCECNGHASACAFNATLNTGICS 580
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNC--DSVKGQCES 127
C GD CD CDV +Y C+ C A V + C D ++G +
Sbjct: 581 DCDSQTAGDNCDTCDVGYYRAAGVSADATNPCQPCSHCNANGVDPSIVCVPDPIQGDAGT 640
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCK 187
S + + F A C D G S C+++G C CK
Sbjct: 641 CACVSP-YIGSTCTACIDTFFFNASTSTCQACACDDD------GASEARTCDAQGVCTCK 693
Query: 188 PGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G TGDKCD C Y +G C +C CN AG+ + T CD GQC C C
Sbjct: 694 AGYTGDKCDACADGFYRSAASGLCVACACNTAGTEQGTAVCDKATGQCPCTSTHTSRDC 752
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ GC++C+C+ G+V NT CD+ GQC CKD GA+C
Sbjct: 1007 QIGCRACDCDARGTVVNTV-CDAATGQCVCKDRTTGARC 1044
Score = 37.7 bits (86), Expect = 4.6, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 54 CTACNCNPIGSL-NLQCNSE-GRCQCKPGVTGDKCDRC 89
C AC+C+ G++ N C++ G+C CK TG +CDRC
Sbjct: 1010 CRACDCDARGTVVNTVCDAATGQCVCKDRTTGARCDRC 1047
>gi|321471067|gb|EFX82041.1| hypothetical protein DAPPUDRAFT_317030 [Daphnia pulex]
Length = 2880
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 22/224 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C++C Y++ C +CNC+ GSL + C+ EGRCQC+ G +CD
Sbjct: 622 CLPNFSGRACDQCSPGYFKYPE---CISCNCDTSGSLGVSCDDEGRCQCRSNFDGHRCDH 678
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV-KGQCESAQLSSRGRV--HTELRVQSR 145
C Y++ C+ C C+PAG V+ C SV KG+ + +GR+ + +
Sbjct: 679 CREGFYNY--PACEDCNCDPAGVVEAFAGCGSVPKGELCKCKERVQGRICNQCKPLYWNM 736
Query: 146 KNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD 204
+ +P G C+ D G GSL + + +G+C CK VT +C C ++
Sbjct: 737 QTNNPLG--------CQDCDCVVAGTIGSLRVCGSDDGQCSCKSRVTSRRCSDCADGFFN 788
Query: 205 FGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
E GC C CN GSV +P CD GQC C+ ++G C
Sbjct: 789 LQEDNPFGCMDCGCNIGGSV--SPLCDKTTGQCVCRQRIQGRSC 830
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 99/195 (50%), Gaps = 21/195 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G CL C + GP C C +Y + + C C+C+ G+ QC+S G C+C+P V
Sbjct: 1937 GECLKCLNNAYGPACGLCAPGFYGDAVELKDCQGCHCDECGTS--QCSSFTGVCECQPNV 1994
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G+KCDRC +HY F GC+SC C AG+ + T CD GQC + + GR H E
Sbjct: 1995 IGEKCDRCAPDHYGFSSCRGCRSCSC--AGASEGT-QCDDNTGQCR-CRPGAAGR-HCER 2049
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCD 199
V N+ PAG + + C D + +G G CN E G+C C PGV GDKC+ C
Sbjct: 2050 CVSGFWNYSPAGCQSCN---CNED-FAIGVG------CNPETGQCACLPGVIGDKCEACP 2099
Query: 200 VNHYDFGEAGCKSCE 214
+ GC C+
Sbjct: 2100 YRWVLVPDQGCFECD 2114
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 104/261 (39%), Gaps = 74/261 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNY---YQKSGDNFCTACNCN-PIGSLNLQCN-------SE 72
G C +C+ + G +CEKC Y ++ + C C C PI S N E
Sbjct: 1824 GKCFNCKHNTVGDHCEKCDVGYQGDATQATPSDCLICACPLPIESNNFALTCDFSPAGDE 1883
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
CQCKPG TG C+ C Y EA CK C C+ V + CDS+ G+C
Sbjct: 1884 IACQCKPGYTGPLCESCAPGFYGRPEAIGDFCKPCNCSNNIDVDDPQACDSITGEC---- 1939
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--------PLGHGGSLNL----- 176
+C + Y P +G ++ L
Sbjct: 1940 -----------------------------LKCLNNAYGPACGLCAPGFYGDAVELKDCQG 1970
Query: 177 ---------QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
QC+S G C+C+P V G+KCDRC +HY F GC+SC C AG+ + T
Sbjct: 1971 CHCDECGTSQCSSFTGVCECQPNVIGEKCDRCAPDHYGFSSCRGCRSCSC--AGASEGT- 2027
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
CD GQC C+ G C
Sbjct: 2028 QCDDNTGQCRCRPGAAGRHCE 2048
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 30 QGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKC 86
Q DR+ P+ CR + + + + C C+ GSL+ +C+ G +C CK GV G +C
Sbjct: 1358 QVDRNTPDF--CRQAIFTLTTEFNSGALPCQCDFQGSLSFECDPFGGQCPCKSGVIGRQC 1415
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
RC ++ F + CK C+C +T CD G C + R + V +
Sbjct: 1416 TRCQTGYFGFPD--CKPCDC------PSTALCDPASGSCICPPRVTGARC--DQCVANTY 1465
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF 205
+DP I C + + G NLQC+S G+CQCK V KCDRC ++ F
Sbjct: 1466 GYDP----IIGCEECSCNPQGVHQG---NLQCDSSTGQCQCKHNVVSRKCDRCAFGYWAF 1518
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C C+ GS + CD C CK+NV G C
Sbjct: 1519 --PYCQLCNCDVRGSAEEI--CDQETASCFCKENVIGLSC 1554
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 55/269 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQK-- 48
CNC G ++ C ++ ++ +R G GG C +C+ + G NC +C+ +Y+
Sbjct: 349 CNCFGHTDECQYNPDI-DRLGLSLDINGFYEGGGVCQNCRHNTQGINCNECKPTFYRPYD 407
Query: 49 ---SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ + C C C+ S G+C+C+P CD+C +Y + + CK C+
Sbjct: 408 KFLNATDVCQPCQCDEFFSTGNCAEGSGQCECRPQFLSPHCDQCSFGYYGYPQ--CKPCD 465
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ G+ N C+ GQC ++ AGN + +C
Sbjct: 466 CHINGTRDNV--CEVGGGQCPC-------------------KYNYAGN---NCDQCAEGY 501
Query: 166 YPLGH--------GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
Y GS++ C+ E G+CQC G C+RC+ H F C C C+
Sbjct: 502 YNFPECLPCECEAPGSISDACDLENGQCQCDHNFGGRGCERCE--HGFFNYPTCTYCNCD 559
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P G++K CD GQC CK G +C
Sbjct: 560 PRGTIKEV--CDKNNGQCICKPGYGGPRC 586
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 81/202 (40%), Gaps = 32/202 (15%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
GG C C+ G C +C+ Y+ G C C+C S L + G C C P V
Sbjct: 1400 FGGQC-PCKSGVIGRQCTRCQTGYF---GFPDCKPCDC---PSTALCDPASGSCICPPRV 1452
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
TG +CD+C N Y + GC+ C CNP G + CDS GQC+
Sbjct: 1453 TGARCDQCVANTYGYDPIIGCEECSCNPQGVHQGNLQCDSSTGQCQCKH----------- 1501
Query: 141 RVQSRKNFDPAGNRIWDLRRCKR---DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
V SRK D W C+ D GS C+ E C CK V G CD
Sbjct: 1502 NVVSRK-CDRCAFGYWAFPYCQLCNCDVR-----GSAEEICDQETASCFCKENVIGLSCD 1555
Query: 197 RCDVNHYDFGEA---GCKSCEC 215
C ++ E+ GC C C
Sbjct: 1556 MCSSGTFNLQESNPRGCSKCFC 1577
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 94/250 (37%), Gaps = 71/250 (28%)
Query: 29 CQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC------------NPIGSLNLQC--NS 71
C+ GP CE C +Y + GD FC CNC + I L+C N+
Sbjct: 1888 CKPGYTGPLCESCAPGFYGRPEAIGD-FCKPCNCSNNIDVDDPQACDSITGECLKCLNNA 1946
Query: 72 EGRC--QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
G C PG GD + D C+ C C+ G T C S G CE
Sbjct: 1947 YGPACGLCAPGFYGDAVELKD----------CQGCHCDECG----TSQCSSFTGVCECQP 1992
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTYPLGH----------GGSLNLQC 178
N I + RC D Y G S QC
Sbjct: 1993 -----------------------NVIGEKCDRCAPDHYGFSSCRGCRSCSCAGASEGTQC 2029
Query: 179 N-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+ + G+C+C+PG G C+RC +++ AGC+SC CN ++ C+ GQC C
Sbjct: 2030 DDNTGQCRCRPGAAGRHCERCVSGFWNYSPAGCQSCNCNEDFAIG--VGCNPETGQCACL 2087
Query: 238 DNVEGAQCRS 247
V G +C +
Sbjct: 2088 PGVIGDKCEA 2097
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 99/251 (39%), Gaps = 56/251 (22%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSG------DNF-CTACNC---------NP-IGSLNLQCNS 71
CQ + GP CE+C + QK+ D F C CNC NP I L L +
Sbjct: 314 CQHNTCGPQCERCCPGFVQKAWKQSKAYDPFTCEPCNCFGHTDECQYNPDIDRLGLSLDI 373
Query: 72 E------GRCQ-CKPGVTGDKCDRCDVNHY----DFGEAG--CKSCECNPAGSVKNTPNC 118
G CQ C+ G C+ C Y F A C+ C+C+ S T NC
Sbjct: 374 NGFYEGGGVCQNCRHNTQGINCNECKPTFYRPYDKFLNATDVCQPCQCDEFFS---TGNC 430
Query: 119 DSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNL 176
GQCE Q S + D + +CK D + G+ +
Sbjct: 431 AEGSGQCECRPQFLS-------------PHCDQCSFGYYGYPQCKPCDCH---INGTRDN 474
Query: 177 QCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C G +C CK G+ CD+C +Y+F E C CEC GS+ + CD GQC+
Sbjct: 475 VCEVGGGQCPCKYNYAGNNCDQCAEGYYNFPE--CLPCECEAPGSISDA--CDLENGQCQ 530
Query: 236 CKDNVEGAQCR 246
C N G C
Sbjct: 531 CDHNFGGRGCE 541
>gi|344266496|ref|XP_003405316.1| PREDICTED: netrin-4-like [Loxodonta africana]
Length = 628
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCRFDMAVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCISS 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 462
>gi|410977472|ref|XP_003995129.1| PREDICTED: laminin subunit alpha-3 [Felis catus]
Length = 3215
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 123/271 (45%), Gaps = 42/271 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D ++ + G GG C++CQ + G NCE C YY+ G
Sbjct: 261 CNCHGHAIDCYYDPDVERQRGSLNIQGIYAGGGVCINCQHNTAGVNCEICAKGYYRPYGV 320
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+CNP + + + S GRC+CKP GD C+ C V +Y+F C
Sbjct: 321 PVDAPHGCIPCSCNPEHADDCEPGS-GRCKCKPNFRGDNCEECAVGYYNF-----PFCLR 374
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-----RVQSRKNFDPAGNRIWDLRRC 161
P + DSV G + + G V E+ R R + G R D R
Sbjct: 375 IPIFPISTPSPEDSVAGDMKGCDCNLEG-VLPEICDAYGRCLCRPGVE--GPRC-DACRL 430
Query: 162 KRDTYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
++P+ GS C+ G+C+C+PG+TG +CDRC DF S
Sbjct: 431 GFYSFPICQACQCSVLGSYQTPCSPVTGQCECQPGITGQRCDRCLSGASDFPHCQGSSGA 490
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CNPAG++ DS G C+CK +VE C
Sbjct: 491 CNPAGTL------DSSLGYCQCKLHVESPSC 515
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 107/237 (45%), Gaps = 42/237 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS C+ G+C+C+PG+T
Sbjct: 412 GRCL-CRPGVEGPRCDACRLGFYSFP---ICQACQCSVLGSYQTPCSPVTGQCECQPGIT 467
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC DF S CNPAG++ DS G C+ ++H E
Sbjct: 468 GQRCDRCLSGASDFPHCQGSSGACNPAGTL------DSSLGYCQC-------KLHVE--- 511
Query: 143 QSRKNFDPA----GNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTG 192
P+ W+L + + G + +G C CK V G
Sbjct: 512 ------SPSCSICKPSYWNLAKENPSGCSECQCHVAGTVSGIGECGQQDGDCHCKSHVNG 565
Query: 193 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
D CD C+ +Y ++ GC+ C+C+ G++ TP C G C C+++V G C+
Sbjct: 566 DSCDTCEDGYYALEKSNYFGCQGCQCDIGGAI--TPMCSGPSGGCRCREHVVGKACQ 620
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 104/240 (43%), Gaps = 44/240 (18%)
Query: 29 CQGDRDGPNCEKCRDNYY--------------------QKSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCE+C YY +GD C+CN G L
Sbjct: 350 CKPNFRGDNCEECAVGYYNFPFCLRIPIFPISTPSPEDSVAGD--MKGCDCNLEGVLPEI 407
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C++ GRC C+PGV G +CD C + Y F C++C+C+ GS + TP C V GQCE
Sbjct: 408 CDAYGRCLCRPGVEGPRCDACRLGFYSF--PICQACQCSVLGSYQ-TP-CSPVTGQCECQ 463
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
+ R L S D C+ + G+L+ +S G CQCK
Sbjct: 464 PGITGQRCDRCLSGAS------------DFPHCQGSSGACNPAGTLD---SSLGYCQCKL 508
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V C C ++++ + +GC C+C+ AG+V C G C CK +V G C
Sbjct: 509 HVESPSCSICKPSYWNLAKENPSGCSECQCHVAGTVSGIGECGQQDGDCHCKSHVNGDSC 568
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 89/196 (45%), Gaps = 33/196 (16%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G++ C+ EG +CQC+P V G +C RC V +Y F CK C C + T
Sbjct: 1173 CECHPTGAIGRHCSPEGGQCQCQPNVIGRRCTRCRVGYYGFPR--CKPCNCGRRLCEETT 1230
Query: 116 PNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGH 170
C +V QCE DP L C+ + G
Sbjct: 1231 GKCLCLPHTVGPQCEVC--------------------DPYSFSFHPLAGCESCNCSRRGA 1270
Query: 171 GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
G+ +C+ + G+C+CKP VTG +CD+C Y F E C C CN G+ C+
Sbjct: 1271 IGAATPECDRDHGQCRCKPRVTGRQCDQCAPGFYHFPE--CVPCHCNRDGTEPGV--CNP 1326
Query: 230 VKGQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 1327 GTGACLCKENVEGTEC 1342
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 105/260 (40%), Gaps = 55/260 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQK-------SGDNFCTACNCN--------------PIGSLN 66
+CQ G C++C Y Q+ N C ACNC+ GSLN
Sbjct: 225 ECQHHTCGKTCDRCCAGYNQRRWRPASWEQSNECEACNCHGHAIDCYYDPDVERQRGSLN 284
Query: 67 LQCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPN 117
+Q G C+ G C+ C +Y +G GC C CNP ++ +
Sbjct: 285 IQGIYAGGGVCINCQHNTAGVNCEICAKGYYRPYGVPVDAPHGCIPCSCNP----EHADD 340
Query: 118 CDSVKGQC------------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ G+C E A + + P + D++ C +
Sbjct: 341 CEPGSGRCKCKPNFRGDNCEECAVGYYNFPFCLRIPIFPISTPSPEDSVAGDMKGCDCNL 400
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G L C++ GRC C+PGV G +CD C + Y F C++C+C+ GS + TP
Sbjct: 401 -----EGVLPEICDAYGRCLCRPGVEGPRCDACRLGFYSF--PICQACQCSVLGSYQ-TP 452
Query: 226 NCDSVKGQCECKDNVEGAQC 245
C V GQCEC+ + G +C
Sbjct: 453 -CSPVTGQCECQPGITGQRC 471
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 38/156 (24%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G CEC+P G++ +C GQC+ Q + GR T RV +
Sbjct: 1169 GALPCECHPTGAIGR--HCSPEGGQCQ-CQPNVIGRRCTRCRVG-----------YYGFP 1214
Query: 160 RCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGC 210
RCK CN + G+C C P G +C+ CD + F AGC
Sbjct: 1215 RCK--------------PCNCGRRLCEETTGKCLCLPHTVGPQCEVCDPYSFSFHPLAGC 1260
Query: 211 KSCECNPAGSV-KNTPNCDSVKGQCECKDNVEGAQC 245
+SC C+ G++ TP CD GQC CK V G QC
Sbjct: 1261 ESCNCSRRGAIGAATPECDRDHGQCRCKPRVTGRQC 1296
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 78/199 (39%), Gaps = 35/199 (17%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C CQ + G C +CR YY G C CNC L + G+C C P
Sbjct: 1189 GGQC-QCQPNVIGRRCTRCRVGYY---GFPRCKPCNCG----RRLCEETTGKCLCLPHTV 1240
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGSV-KNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +C+ CD + F AGC+SC C+ G++ TP CD GQC
Sbjct: 1241 GPQCEVCDPYSFSFHPLAGCESCNCSRRGAIGAATPECDRDHGQCRCKP----------- 1289
Query: 141 RVQSRKNFDPAGNRIWDLRRC-----KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDK 194
RV R+ D + C RD G+ CN G C CK V G +
Sbjct: 1290 RVTGRQ-CDQCAPGFYHFPECVPCHCNRD-------GTEPGVCNPGTGACLCKENVEGTE 1341
Query: 195 CDRCDVNHYDFGEAGCKSC 213
C+ C + A K C
Sbjct: 1342 CNVCREGSFYLDPANPKGC 1360
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CNCNG SNRC G C++CQ + G +CE+C++ +Y + C+ C C
Sbjct: 1594 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCERCKEGHYGNAIHGHCSVCPC 1643
>gi|32966030|gb|AAP92113.1| netrin 4 [Homo sapiens]
Length = 605
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 22/137 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKG 123
AGS CD + G
Sbjct: 452 --AGS------CDPITG 460
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G
Sbjct: 416 SNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITG 460
>gi|355698918|gb|AES00958.1| laminin, beta 1 [Mustela putorius furo]
Length = 477
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 105/224 (46%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCNG S C FD +Y TG+ GG C DCQ + G +CE+C+ Y+Q N
Sbjct: 90 CNCNGHSGSCHFDMAVYLATGNVTGGVCDDCQHNTMGRSCEQCKPFYFQHPERDVRDPNL 149
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P GS N C+S G+C+CK V G+ C+ C Y G
Sbjct: 150 CERCSCDPAGSQNGGICDSHTDFSTGLIAGQCRCKLHVEGEHCEICKEGFYGLSAEDPFG 209
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C SC CNP G++ CDS G C +L + L + D G R
Sbjct: 210 CTSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDG-----CRP 264
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C++E G+C C+P V G +C+ + +Y
Sbjct: 265 CDCDL-----GGALNNSCSAESGQCACRPHVIGRQCNEMESGYY 303
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 91/233 (39%), Gaps = 49/233 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGSLNLQCNSEGRCQ 76
GHC+ C+ + G NCE+C D Y+ + N C CNCN + C+ +
Sbjct: 51 GHCM-CRHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCN---GHSGSCHFDMAVY 106
Query: 77 CKPG-VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
G VTG CD C H G +SCE QC+ R
Sbjct: 107 LATGNVTGGVCDDC--QHNTMG----RSCE------------------QCKPFYFQHPER 142
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+ + R + DPAG++ + D S L G+C+CK V G+ C
Sbjct: 143 DVRDPNLCERCSCDPAGSQNGGICDSHTDF-------STGL---IAGQCRCKLHVEGEHC 192
Query: 196 DRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C Y GC SC CNP G++ CDS G C CK V G C
Sbjct: 193 EICKEGFYGLSAEDPFGCTSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQHC 245
>gi|157817109|ref|NP_001100250.1| netrin-4 precursor [Rattus norvegicus]
gi|149067173|gb|EDM16906.1| rCG48694 [Rattus norvegicus]
Length = 630
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C AC+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKACSCHPVGSAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCISS 465
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 462
>gi|9652103|gb|AAF91404.1|AF268066_1 netrin 4 [Mus musculus]
gi|11120055|gb|AAG30823.1|AF281278_1 beta netrin [Mus musculus]
gi|111600048|gb|AAI19183.1| Netrin 4 [Mus musculus]
gi|111601161|gb|AAI19185.1| Netrin 4 [Mus musculus]
gi|148689616|gb|EDL21563.1| netrin 4 [Mus musculus]
Length = 628
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C AC+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKACSCHPVGSAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCISS 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 462
>gi|226442874|ref|NP_067295.2| netrin-4 precursor [Mus musculus]
gi|341941169|sp|Q9JI33.2|NET4_MOUSE RecName: Full=Netrin-4; AltName: Full=Beta-netrin; Flags: Precursor
Length = 628
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C AC+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKACSCHPVGSAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCISS 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 462
>gi|281340395|gb|EFB15979.1| hypothetical protein PANDA_007903 [Ailuropoda melanoleuca]
Length = 610
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 314 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 373
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 374 CRMCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 433
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 434 --AGS------CDPLTGDCISS 447
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 398 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 444
>gi|194226672|ref|XP_001915979.1| PREDICTED: netrin-4-like [Equus caballus]
Length = 633
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 334 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 393
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 394 CKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 453
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 454 --AGS------CDPLTGDCISS 467
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 418 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 464
>gi|426253989|ref|XP_004020671.1| PREDICTED: laminin subunit alpha-3 [Ovis aries]
Length = 3334
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 109/259 (42%), Gaps = 61/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G S C++D ++ + GG C++CQ + G NCEKC YY+ G
Sbjct: 351 CNCHGHSTDCYYDPDVERQQASLNIQGLYAGGGVCINCQHNTAGVNCEKCAKGYYRPYGI 410
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + + S GRC C+P GD C+ C +Y F
Sbjct: 411 PVHAPDGCIPCSCHPERAEDCEQGS-GRCTCRPNFRGDHCEECAAGYYHF---------- 459
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P C + L + + DP I C +
Sbjct: 460 ---------PVCSRIP----------------ILPISTPSPEDPVAGDIIKGCDCNLE-- 492
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G L C+++GRC C+ V G +CD C Y F C++C+C+ GS + TP
Sbjct: 493 -----GVLPEICDAQGRCLCRTSVGGARCDACRSGFYSF--PICQACQCSALGSYQ-TP- 543
Query: 227 CDSVKGQCECKDNVEGAQC 245
C V GQCEC+ + G QC
Sbjct: 544 CSPVTGQCECRPGITGQQC 562
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 42/237 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ G C+ CR +Y C AC C+ +GS C+ G+C+C+PG+T
Sbjct: 503 GRCL-CRTSVGGARCDACRSGFYSFP---ICQACQCSALGSYQTPCSPVTGQCECRPGIT 558
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC DF S C+PAG+V DS G C+ ++H E
Sbjct: 559 GQQCDRCLSGASDFPYCQGSSNVCDPAGTV------DSSLGHCQC-------KLHVE--- 602
Query: 143 QSRKNFDPA----GNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTG 192
P+ W+L + D + G + +G C CK V G
Sbjct: 603 ------SPSCSLCKPLYWNLAKENPDGCSECRCHMAGTMSGIGECGQLDGDCHCKSHVGG 656
Query: 193 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
D CD C+ ++ ++ GC+ C C+ G+V TP C G C+C+++V G C+
Sbjct: 657 DSCDTCEDGYFALEKSNYFGCQGCRCDIGGAV--TPVCSGPSGVCQCREHVVGKSCQ 711
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 41/200 (20%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G++ C+ EG +C C+P V G +C RC Y+F CK C C + T
Sbjct: 1265 CECHPAGAIGHPCSPEGGQCPCRPHVIGRQCTRCQTGFYEFPH--CKPCNCGRRLCEETT 1322
Query: 116 PNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG-----NRIWDLRRCKRDTY 166
C +V+ QC+ ++ S +F P N C R
Sbjct: 1323 GRCLCPPRTVRPQCDMCEVRSF-------------SFHPLAGCEGCN-------CSR--- 1359
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
+G + ++C+ + G+C+CKP +TG +CDRC Y F E C C C+ G+
Sbjct: 1360 -MGTDRAATVECDRDHGQCRCKPRITGRQCDRCTPGFYRFPE--CLPCHCSRDGTEPGV- 1415
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD G C CK+NV+G +C
Sbjct: 1416 -CDPGTGACLCKENVQGTEC 1434
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 20/136 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ YY + C C C
Sbjct: 1686 CNCNGHSNRC---------QDGSGVCINCQHNTAGEHCERCKEGYYWNTVHASCRVCPCP 1736
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G +C CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1737 HSDSFATGCVVTGENVKCFCKPGYTGTRCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLG 1795
Query: 114 NTPNCDSVKGQCESAQ 129
+CD + G C S +
Sbjct: 1796 ---SCDPLNGDCISQE 1808
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 29 CQGDRDGPNCEKCRDNYYQ-------------------KSGDNFCTACNCNPIGSLNLQC 69
C+ + G +CE+C YY + C+CN G L C
Sbjct: 440 CRPNFRGDHCEECAAGYYHFPVCSRIPILPISTPSPEDPVAGDIIKGCDCNLEGVLPEIC 499
Query: 70 NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+++GRC C+ V G +CD C Y F C++C+C+ GS + TP C V GQCE
Sbjct: 500 DAQGRCLCRTSVGGARCDACRSGFYSF--PICQACQCSALGSYQ-TP-CSPVTGQCE--- 552
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG 189
R + + + D + D C+ + G+++ +S G CQCK
Sbjct: 553 --CRPGI-------TGQQCDRCLSGASDFPYCQGSSNVCDPAGTVD---SSLGHCQCKLH 600
Query: 190 VTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V C C +++ + GC C C+ AG++ C + G C CK +V G C
Sbjct: 601 VESPSCSLCKPLYWNLAKENPDGCSECRCHMAGTMSGIGECGQLDGDCHCKSHVGGDSC 659
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 61/152 (40%), Gaps = 30/152 (19%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G CEC+PAG++ + C GQC R H R
Sbjct: 1261 GALPCECHPAGAIGHP--CSPEGGQCPC-------RPHVIGR---------------QCT 1296
Query: 160 RCKRDTYPLGHGGSLN----LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCE 214
RC+ Y H N L + GRC C P +CD C+V + F AGC+ C
Sbjct: 1297 RCQTGFYEFPHCKPCNCGRRLCEETTGRCLCPPRTVRPQCDMCEVRSFSFHPLAGCEGCN 1356
Query: 215 CNPAGSVK-NTPNCDSVKGQCECKDNVEGAQC 245
C+ G+ + T CD GQC CK + G QC
Sbjct: 1357 CSRMGTDRAATVECDRDHGQCRCKPRITGRQC 1388
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGS---LNLQCNSE-GRCQCKPGVTGDKCDRCDV 91
P C+ C + C CNC+ +G+ ++C+ + G+C+CKP +TG +CDRC
Sbjct: 1334 PQCDMCEVRSFSFHPLAGCEGCNCSRMGTDRAATVECDRDHGQCRCKPRITGRQCDRCTP 1393
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C C+ G+ CD G C
Sbjct: 1394 GFYRFPE--CLPCHCSRDGTEPGV--CDPGTGAC 1423
>gi|330688474|ref|NP_001193448.1| laminin subunit beta-1 precursor [Bos taurus]
Length = 1786
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 105/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ +
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPSL 394
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C Y G
Sbjct: 395 CEQCTCDPAGSQNGGICDSYTDFSAGLIAGQCRCKLYVEGEHCDICKEGFYGLSAEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGYCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C + +Y
Sbjct: 503 DLDGCRPCDCDI-----GGALNNSCSAESGQCLCRPHMIGRQCSEVESGYY 548
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G +CDRC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRRCDRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV + CD + GQC
Sbjct: 810 TFGFGPSGCKPCECHLQGSV--SAFCDPITGQC 840
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 107/278 (38%), Gaps = 63/278 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DSVTGECLSCQDYTTGHNCERCLAGYYGDPVIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFG 97
+SG F ++C +P+ SL L C C PG G +CD C + D G
Sbjct: 918 PCPDGPESGRQFASSCYQDPV-SLQLA------CVCNPGYIGSRCDECASGFFGNPSDVG 970
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-W 156
C+ C+C+ + CD G+C + G H +L F G+ +
Sbjct: 971 -GTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTEGE-HCQL-----CRFGYYGDALRQ 1023
Query: 157 DLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE- 207
D R+C + G++ CN + G+C C P V G CDRC N +
Sbjct: 1024 DCRKCV-----CNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASG 1078
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C C+ A S P+C+ GQC C G C
Sbjct: 1079 TGCDPCSCDAAHSFG--PSCNEFTGQCHCMPGFGGRTC 1114
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 115/257 (44%), Gaps = 47/257 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE+C D Y+ + N C CNCN S L
Sbjct: 296 GHCM-CRHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLAT 354
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGE------AGCKSCECNPAGSVKNTPNCDS 120
S G C C+ G C++C +Y E + C+ C C+PAGS +N CDS
Sbjct: 355 GNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPSLCEQCTCDPAGS-QNGGICDS 413
Query: 121 --------VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHG 171
+ GQC +L G H ++ ++ F G D CK PLG
Sbjct: 414 YTDFSAGLIAGQCR-CKLYVEGE-HCDI---CKEGF--YGLSAEDPFGCKSCACNPLGTI 466
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCD 228
N C+SE G C CK VTG CD+C H+ GC+ C+C+ G++ N+ C
Sbjct: 467 PGGN-PCDSETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDIGGALNNS--CS 523
Query: 229 SVKGQCECKDNVEGAQC 245
+ GQC C+ ++ G QC
Sbjct: 524 AESGQCLCRPHMIGRQC 540
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 100/238 (42%), Gaps = 30/238 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C C C+ GS++ C+ G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRRCDRCAPGTF-GFGPSGCKPCECHLQGSVSAFCDPITGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC + F C+ C+CN + +CDSV G+C S Q + G H R
Sbjct: 847 YTRQCDRCLPGFWGF--PSCQPCQCN-----GHADDCDSVTGECLSCQDYTTG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + ++LQ C C PG G
Sbjct: 898 CLAGYYGDPVIGSGDHCRPCPCPDGPESGRQFASSCYQDPVSLQL----ACVCNPGYIGS 953
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + D G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 954 RCDECASGFFGNPSDVG-GTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTEGEHCQ 1010
>gi|296488520|tpg|DAA30633.1| TPA: laminin, beta 1 [Bos taurus]
Length = 1792
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 105/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ +
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPSL 394
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C Y G
Sbjct: 395 CEQCTCDPAGSQNGGICDSYTDFSAGLIAGQCRCKLYVEGEHCDICKEGFYGLSAEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGYCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C + +Y
Sbjct: 503 DLDGCRPCDCDI-----GGALNNSCSAESGQCLCRPHMIGRQCSEVESGYY 548
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G +CDRC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRRCDRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV + CD + GQC
Sbjct: 810 TFGFGPSGCKPCECHLQGSV--SAFCDPITGQC 840
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 107/278 (38%), Gaps = 63/278 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DSVTGECLSCQDYTTGHNCERCLAGYYGDPVIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFG 97
+SG F ++C +P+ SL L C C PG G +CD C + D G
Sbjct: 918 PCPDGPESGRQFASSCYQDPV-SLQLA------CVCNPGYIGSRCDECASGFFGNPSDVG 970
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-W 156
C+ C+C+ + CD G+C + G H +L F G+ +
Sbjct: 971 -GTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTEGE-HCQL-----CRFGYYGDALRQ 1023
Query: 157 DLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE- 207
D R+C + G++ CN + G+C C P V G CDRC N +
Sbjct: 1024 DCRKCV-----CNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASG 1078
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C C+ A S P+C+ GQC C G C
Sbjct: 1079 TGCDPCSCDAAHSFG--PSCNEFTGQCHCMPGFGGRTC 1114
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 81/185 (43%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G +C+ CR YY + C C CN +G++ CN + G+C
Sbjct: 995 GRCLKCLYHTEGEHCQLCRFGYYGDALRQDCRKCVCNYLGTVQEHCNGSDCQCDKTTGQC 1054
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N + GC C C+ A S P+C+ GQC G
Sbjct: 1055 LCLPNVIGQNCDRCAPNTWQLASGTGCDPCSCDAAHSFG--PSCNEFTGQCHCMP-GFGG 1111
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E Q DP+ + R C D G QC+ S G+C C GV G
Sbjct: 1112 RTCSE--CQELFWGDPSV----ECRACDCDPR-----GIETPQCDQSTGQCVCVEGVEGP 1160
Query: 194 KCDRC 198
+CD+C
Sbjct: 1161 RCDKC 1165
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 115/257 (44%), Gaps = 47/257 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE+C D Y+ + N C CNCN S L
Sbjct: 296 GHCM-CRHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLAT 354
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGE------AGCKSCECNPAGSVKNTPNCDS 120
S G C C+ G C++C +Y E + C+ C C+PAGS +N CDS
Sbjct: 355 GNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPSLCEQCTCDPAGS-QNGGICDS 413
Query: 121 --------VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHG 171
+ GQC +L G H ++ ++ F G D CK PLG
Sbjct: 414 YTDFSAGLIAGQCR-CKLYVEGE-HCDI---CKEGF--YGLSAEDPFGCKSCACNPLGTI 466
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCD 228
N C+SE G C CK VTG CD+C H+ GC+ C+C+ G++ N+ C
Sbjct: 467 PGGN-PCDSETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDIGGALNNS--CS 523
Query: 229 SVKGQCECKDNVEGAQC 245
+ GQC C+ ++ G QC
Sbjct: 524 AESGQCLCRPHMIGRQC 540
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 100/238 (42%), Gaps = 30/238 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C C C+ GS++ C+ G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRRCDRCAPGTF-GFGPSGCKPCECHLQGSVSAFCDPITGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC + F C+ C+CN + +CDSV G+C S Q + G H R
Sbjct: 847 YTRQCDRCLPGFWGF--PSCQPCQCN-----GHADDCDSVTGECLSCQDYTTG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + ++LQ C C PG G
Sbjct: 898 CLAGYYGDPVIGSGDHCRPCPCPDGPESGRQFASSCYQDPVSLQL----ACVCNPGYIGS 953
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + D G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 954 RCDECASGFFGNPSDVG-GTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTEGEHCQ 1010
>gi|149039663|gb|EDL93825.1| laminin, alpha 2 (predicted), isoform CRA_b [Rattus norvegicus]
Length = 3056
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 122/254 (48%), Gaps = 37/254 (14%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C + +TG +C+ + G C++C+ + C CNC
Sbjct: 919 CNVNGSFSEIC------HRKTGQ----CECRPNVQGQRCDECKPETFGLQLGRGCIPCNC 968
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+ G+ NC+
Sbjct: 969 NSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCN 1023
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GQC ++ G +E + + G ++ C T GSL+ QCN
Sbjct: 1024 PKTGQCICPP-NTIGEKCSECLPNTWGHSIVTGCKV-----CNCSTV-----GSLSSQCN 1072
Query: 180 -SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK------- 231
+ G+C C P +G KC C+ H+++ C C+C G+ T + ++ K
Sbjct: 1073 INTGQCSCHPKFSGMKCSECNRGHWNY--PLCSLCDCFLPGTDATTCDSETRKCSCSDQT 1130
Query: 232 GQCECKDNVEGAQC 245
GQC CK NVEG C
Sbjct: 1131 GQCTCKVNVEGVHC 1144
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 111/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 815 NNFSPTCHLDRSL------GLICDECPVGYTGPRCERCAEGYFGQPSIPGGSCQPCLCND 868
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 869 ----NLDFSIPGSCDSLSGSCLICKPGTTGRFCELCADGY--FGDAVDAKNCQPCRCNVN 922
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C GQCE R N G R CK +T+ L
Sbjct: 923 GSFSEI--CHRKTGQCEC-----------------RPNVQ--GQRC---DECKPETFGLQ 958
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+
Sbjct: 959 LGRGCIPCNCNSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCTACDCSHL 1018
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NC+ GQC C N G +C
Sbjct: 1019 GN-----NCNPKTGQCICPPNTIGEKC 1040
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 72/196 (36%), Gaps = 59/196 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C +C N + S C CNC+ +GSL+ QCN + G+C C P +
Sbjct: 1027 GQCI-CPPNTIGEKCSECLPNTWGHSIVTGCKVCNCSTVGSLSSQCNINTGQCSCHPKFS 1085
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C+ H+++ C C+C G+ T CDS +C
Sbjct: 1086 GMKCSECNRGHWNY--PLCSLCDCFLPGTDATT--CDSETRKCS---------------- 1125
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C T G+C CK V G CDRC
Sbjct: 1126 ------------------CSDQT----------------GQCTCKVNVEGVHCDRCRPGK 1151
Query: 203 YDF---GEAGCKSCEC 215
+ GC SC C
Sbjct: 1152 FGLEAKNPLGCSSCYC 1167
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1493 CTACPRGYEGQYCERCAPGYAGSPSSPGGSCQECECDPYGSLPVPCDPVTGLCTCRPGAT 1552
Query: 83 GDKCDRCDVNH 93
G KCD C+ H
Sbjct: 1553 GRKCDGCEHGH 1563
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG G CDRC V Y G C+ C C+ GS N D G C CK+NVE
Sbjct: 439 GSCYCKPGFGGMNCDRC-VRGYR-GYPDCQPCNCSGLGST----NQDPCIGPCSCKENVE 492
Query: 242 GAQC 245
G C
Sbjct: 493 GEDC 496
>gi|426227599|ref|XP_004007905.1| PREDICTED: laminin subunit beta-1 [Ovis aries]
Length = 1786
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 105/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ +
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDVRDPSL 394
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C Y G
Sbjct: 395 CEQCTCDPAGSQNGGICDSYTDFSVGLIAGQCRCKLYVEGEHCDICKEGFYGLSAEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGYCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C + +Y
Sbjct: 503 DLDGCRPCDCD-----FGGALNNSCSAESGQCLCRPHMIGRQCSEVESGYY 548
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 107/277 (38%), Gaps = 61/277 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C D E G CL CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC--DSE-------TGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-- 99
+SG F ++C +P+ SL L C C PG G +CD C + A
Sbjct: 918 PCPDGPESGRQFASSCYQDPV-SLQLA------CVCNPGYIGSRCDECASGFFGNPSAVG 970
Query: 100 -GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WD 157
C+ C+C+ + CD G+C + HTE F G+ + D
Sbjct: 971 GTCQPCQCHHNIDTADPEACDKETGRC------LKCLYHTEGERCQLCQFGYYGDALRQD 1024
Query: 158 LRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE-A 208
R+C + G++ CN + G+C C P V G CDRC N +
Sbjct: 1025 CRKCA-----CNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASGT 1079
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C CN A S P+C+ GQC C G C
Sbjct: 1080 GCDPCSCNAAHSFG--PSCNEFTGQCHCMPGFGGRTC 1114
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+ V G CDRC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRANVVGRGCDRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV CD + GQC
Sbjct: 810 TFGFGPSGCKPCECHLQGSVNAF--CDPITGQC 840
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 80/185 (43%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G C+ C+ YY + C C CN +G++ CN + G+C
Sbjct: 995 GRCLKCLYHTEGERCQLCQFGYYGDALRQDCRKCACNYLGTVQEHCNGSDCQCDKTTGQC 1054
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N + GC C CN A S P+C+ GQC G
Sbjct: 1055 LCLPNVIGQNCDRCAPNTWQLASGTGCDPCSCNAAHSFG--PSCNEFTGQCHCMP-GFGG 1111
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E Q DP+ + R C D G QC+ S G+C C GV G
Sbjct: 1112 RTCSE--CQELFWGDPS----VECRACDCDPR-----GIETPQCDQSTGQCVCVEGVEGP 1160
Query: 194 KCDRC 198
+CD+C
Sbjct: 1161 RCDKC 1165
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 115/257 (44%), Gaps = 47/257 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE+C D Y+ + N C CNCN S L
Sbjct: 296 GHCM-CRHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLAT 354
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGE------AGCKSCECNPAGSVKNTPNCDS 120
S G C C+ G C++C +Y E + C+ C C+PAGS +N CDS
Sbjct: 355 GNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDVRDPSLCEQCTCDPAGS-QNGGICDS 413
Query: 121 --------VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHG 171
+ GQC +L G H ++ ++ F G D CK PLG
Sbjct: 414 YTDFSVGLIAGQCR-CKLYVEGE-HCDI---CKEGF--YGLSAEDPFGCKSCACNPLGTI 466
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCD 228
N C+SE G C CK VTG CD+C H+ GC+ C+C+ G++ N+ C
Sbjct: 467 PGGN-PCDSETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDFGGALNNS--CS 523
Query: 229 SVKGQCECKDNVEGAQC 245
+ GQC C+ ++ G QC
Sbjct: 524 AESGQCLCRPHMIGRQC 540
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 99/237 (41%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C C C+ GS+N C+ G+C C GV
Sbjct: 789 GGQC-QCRANVVGRGCDRCAPGTF-GFGPSGCKPCECHLQGSVNAFCDPITGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC + F C+ C+CN + +CDS G+C S Q + G H R
Sbjct: 847 YTRQCDRCLPGFWGF--PSCQPCQCN-----GHADDCDSETGECLSCQDYTTG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + ++LQ C C PG G
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGPESGRQFASSCYQDPVSLQL----ACVCNPGYIGS 953
Query: 194 KCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + A C+ C+C+ + CD G+C +C + EG +C+
Sbjct: 954 RCDECASGFFGNPSAVGGTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTEGERCQ 1010
>gi|27545301|ref|NP_775382.1| laminin subunit beta-1 precursor [Danio rerio]
gi|21538979|gb|AAM61767.1|AF468049_1 laminin beta 1 [Danio rerio]
Length = 1785
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 104/220 (47%), Gaps = 46/220 (20%)
Query: 12 FDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NFCTACNCNPIGS 64
FD +Y +G+ GG C DCQ + G NCE+C+ ++Q N C CNC+P+GS
Sbjct: 343 FDMAVYRASGNVSGGVCDDCQHNTMGHNCEQCKPFFHQHPEKDIRDPNICEPCNCDPVGS 402
Query: 65 LN-----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGS 111
LN L S G+C+CKP V G++CD+C HY E GC+ C CN G+
Sbjct: 403 LNGGVCDPMTDVSLGLIS-GQCRCKPNVEGERCDQCKQGHYGLSEDPLGCQPCTCNALGT 461
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-------RRCKRD 164
V CD+ G C R+ + +N D + W L R C D
Sbjct: 462 VPGGSPCDTDSGNCYCK------------RLVTGRNCDQCLPQHWGLSNDMDGCRPCDCD 509
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
HGG++N C+ G+CQC+ + G +CD+ + Y
Sbjct: 510 -----HGGAINNNCSPVSGQCQCREHMFGRRCDQVESGFY 544
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 30 QGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKC 86
Q P + CR+ + S AC C+P GSL+ C+ S G+CQC+P V G C
Sbjct: 740 QAVVKTPMTDICRNYIFSVSALLHQGVKACQCDPQGSLSTVCDPSGGQCQCRPNVVGRNC 799
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
DRC + F GC+ C+C+P GSV + C GQCE
Sbjct: 800 DRCAPATFLFXPQGCRPCDCSPEGSVHSY--CHEATGQCE 837
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 110/279 (39%), Gaps = 62/279 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG + +C G CL C+ G NCE+C YY
Sbjct: 863 CTCNGHAEQC---------DPQTGQCLSCRDHTTGHNCERCLGGYYGDPVLGSGDHCRPC 913
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F AC +P +S+ C C G G +C+ C +Y + E G
Sbjct: 914 MCPDGPGSGRQFSGACYKSPD-------SSQVFCVCNQGYKGARCEECAPGYYGNPHEVG 966
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
C+ C+CN + + +CD+ G C + HTE +R GN +
Sbjct: 967 GECRPCQCNSNIDMMDPESCDARTGAC------VKCLYHTEGESCNRCRLGYYGNALTQS 1020
Query: 159 -RRCKRDTYPLGHGGSLNLQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
R+C G++ C S G+C C P V G CD+C + ++
Sbjct: 1021 CRKCV-----CNQMGTVEEMCPSPGNCNCDLTSGQCLCLPNVVGQHCDQCAPDTWNMASG 1075
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GC+ C+C+P S ++ C+ + GQC CK G CR
Sbjct: 1076 KGCEDCDCDPNHSFGSS--CNEIMGQCSCKPGFGGRTCR 1112
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 78/186 (41%), Gaps = 25/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS---------EGR 74
G C+ C +G +C +CR YY + C C CN +G++ C S G+
Sbjct: 991 GACVKCLYHTEGESCNRCRLGYYGNALTQSCRKCVCNQMGTVEEMCPSPGNCNCDLTSGQ 1050
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C P V G CD+C + ++ GC+ C+C+P S ++ C+ + GQC S +
Sbjct: 1051 CLCLPNVVGQHCDQCAPDTWNMASGKGCEDCDCDPNHSFGSS--CNEIMGQC-SCKPGFG 1107
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R W K G QCN G C C GV+G
Sbjct: 1108 GRTCRECR-----------ELFWGNPEVKCHACDCDPRGIAEQQCNKVTGHCVCVEGVSG 1156
Query: 193 DKCDRC 198
+CD C
Sbjct: 1157 PRCDTC 1162
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C+CKP V G++CD+C HY E GC+ C CN G+V CD+ G C CK
Sbjct: 421 GQCRCKPNVEGERCDQCKQGHYGLSEDPLGCQPCTCNALGTVPGGSPCDTDSGNCYCKRL 480
Query: 240 VEGAQC 245
V G C
Sbjct: 481 VTGRNC 486
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 90/240 (37%), Gaps = 57/240 (23%)
Query: 35 GPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEGRCQCKPG--------VTGD 84
G CE+C YY + C C CN N+ C + G G+
Sbjct: 948 GARCEECAPGYYGNPHEVGGECRPCQCNS----NIDMMDPESCDARTGACVKCLYHTEGE 1003
Query: 85 KCDRCDVNHY-DFGEAGCKSCECNPAGSVKN---TP---NCDSVKGQCESAQLSSRGRVH 137
C+RC + +Y + C+ C CN G+V+ +P NCD GQC L + H
Sbjct: 1004 SCNRCRLGYYGNALTQSCRKCVCNQMGTVEEMCPSPGNCNCDLTSGQCLC--LPNVVGQH 1061
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-----------SLNLQCNS-EGRCQ 185
+ +C DT+ + G S CN G+C
Sbjct: 1062 CD--------------------QCAPDTWNMASGKGCEDCDCDPNHSFGSSCNEIMGQCS 1101
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CKPG G C C + E C +C+C+P G + C+ V G C C + V G +C
Sbjct: 1102 CKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQ--QCNKVTGHCVCVEGVSGPRC 1159
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C CK VTG CD+C H+ GC+ C+C+ G++ N NC V GQC+C+++
Sbjct: 473 GNCYCKRLVTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINN--NCSPVSGQCQCREH 530
Query: 240 VEGAQC 245
+ G +C
Sbjct: 531 MFGRRC 536
>gi|395539197|ref|XP_003771559.1| PREDICTED: laminin subunit beta-4 [Sarcophilus harrisii]
Length = 1752
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKC-----RDNYYQKSGDNF 53
CNCNG S RC FD LY + + GG C DCQ + G +C++C RD + + S +
Sbjct: 330 CNCNGHSERCHFDMSLYLSSNSVSGGVCEDCQHNTMGQHCDQCKPLFYRDPFKEISDPHA 389
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C C+P GSL+ + G+C CK V G +CD+C +Y G
Sbjct: 390 CIPCECDPEGSLSGGMCESYPDPVLGIEAGQCFCKDNVEGPQCDQCKSGYYGLNANDPLG 449
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+SC CNP GSV + CD V GQC Q ++ + D W L+
Sbjct: 450 CQSCNCNPLGSVPFS-TCDVVTGQCLCQQFATGPQC------------DECLVGYWGLKN 496
Query: 161 CKRDTYP----LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
P +G G NL ++G+C+C+P V G +C + ++ F E
Sbjct: 497 NLHSCSPCDCDIG-GAYSNLCSPNDGQCECRPHVIGHQCTEPEPGYF-FVPLDFYIYEAE 554
Query: 217 PAGSVK-NTPNCDSVKGQCECKDNVEG 242
A + + P S KD + G
Sbjct: 555 DAMPISGSAPLVTSTFDHVVIKDPILG 581
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 115/276 (41%), Gaps = 85/276 (30%)
Query: 1 CNCNGFSNRCFFDKEL----YNRTGH-GGHCLDCQGDRDGPNCEKCRDNYY-------QK 48
C CNG +N+C +++ ++ G GHC+ CQ + DGPNCE+C++ ++ +
Sbjct: 263 CFCNGHANKCGPTQDVRGDVFSPPGMVHGHCI-CQHNTDGPNCERCKEFFHDVPWRPAEG 321
Query: 49 SGDNFCTACNCNPIG-------SLNLQCNSE--GRCQ-CKPGVTGDKCDRCDVNHY--DF 96
DN C +CNCN SL L NS G C+ C+ G CD+C Y F
Sbjct: 322 LQDNACRSCNCNGHSERCHFDMSLYLSSNSVSGGVCEDCQHNTMGQHCDQCKPLFYRDPF 381
Query: 97 GEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
E C CEC+P GS+ G CES DP
Sbjct: 382 KEISDPHACIPCECDPEGSLSG--------GMCESYP-------------------DPV- 413
Query: 153 NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 209
L ++ G+C CK V G +CD+C +Y G
Sbjct: 414 ---------------------LGIEA---GQCFCKDNVEGPQCDQCKSGYYGLNANDPLG 449
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+SC CNP GSV + CD V GQC C+ G QC
Sbjct: 450 CQSCNCNPLGSVPFS-TCDVVTGQCLCQQFATGPQC 484
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 87/233 (37%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN----------SEG 73
G CL C + GPNC+ C+ Y+ + C C CNP G + C + G
Sbjct: 983 GECLKCLYNTHGPNCQFCKPGYFGSALTQNCRKCTCNPSGVNHTACAIGDTECLCDPTTG 1042
Query: 74 RCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P V G CD+C +++ GC+ CEC+P S ++ +CD GQC
Sbjct: 1043 SCPCLPNVIGLTCDQCAEGYWNLVPRRGCQICECDPQHS--HSTHCDQFTGQCP------ 1094
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1095 ----------------------------CK-----LGYGGK------------------- 1102
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C++C+ N+Y + C C+CN G+ T CD G C C+ V G C
Sbjct: 1103 -HCNKCEENYYGDPQVQCIECKCNKEGT--QTAICDQETGSCLCRAGVMGHFC 1152
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N AC C+P GS+ C+ G +CQCKP VTG CDRC Y G GC CEC+P G
Sbjct: 758 NGAVACKCHPQGSIGSSCSKVGGQCQCKPHVTGRCCDRCSTGAYGLGHHGCHPCECHPQG 817
Query: 111 SVKNTPNCDSVKGQC 125
S CD + GQC
Sbjct: 818 SKSTI--CDQITGQC 830
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 104/264 (39%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C+G G +CE+C D YY C C C
Sbjct: 857 CPCNGFAELC--DPE-------TGSCFNCRGFTAGLHCERCIDGYYGNPLSGKPCLPCQC 907
Query: 60 NPIGSLNL---------QCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
+ S N N E C C+ G TG +CD C Y C C CN
Sbjct: 908 PDVPSSNQYFAHSCYQNSWNLEVICNCQEGYTGIQCDECSSGFYGNPKISGDLCLPCVCN 967
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
+ +C V G+C ++ G Q K + R+C +
Sbjct: 968 NNIDGADPASCSRVTGECLKCLYNTHGP-----NCQFCKPGYFGSALTQNCRKCTCNPSG 1022
Query: 168 LGHG----GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSV 221
+ H G C+ + G C C P V G CD+C +++ GC+ CEC+P S
Sbjct: 1023 VNHTACAIGDTECLCDPTTGSCPCLPNVIGLTCDQCAEGYWNLVPRRGCQICECDPQHS- 1081
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
++ +CD GQC CK G C
Sbjct: 1082 -HSTHCDQFTGQCPCKLGYGGKHC 1104
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKP VTG CDRC Y G GC CEC+P GS CD + GQC C ++
Sbjct: 780 GQCQCKPHVTGRCCDRCSTGAYGLGHHGCHPCECHPQGSKSTI--CDQITGQCSCHRDIG 837
Query: 242 GAQC 245
G +C
Sbjct: 838 GHRC 841
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 91/250 (36%), Gaps = 56/250 (22%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ G C++C Y G + C C C+P GS + C+ G+C C +
Sbjct: 779 GGQC-QCKPHVTGRCCDRCSTGAY-GLGHHGCHPCECHPQGSKSTICDQITGQCSCHRDI 836
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CD C + FG C+ C CN + CD G C + + + G +H E
Sbjct: 837 GGHRCDLCLPGY--FGFPNCRPCPCNGFAEL-----CDPETGSCFNCRGFTAG-LHCE-- 886
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTY--PLGHGGSLNLQC-------------------NS 180
RC Y PL L QC N
Sbjct: 887 ------------------RCIDGYYGNPLSGKPCLPCQCPDVPSSNQYFAHSCYQNSWNL 928
Query: 181 EGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-EC 236
E C C+ G TG +CD C Y C C CN + +C V G+C +C
Sbjct: 929 EVICNCQEGYTGIQCDECSSGFYGNPKISGDLCLPCVCNNNIDGADPASCSRVTGECLKC 988
Query: 237 KDNVEGAQCR 246
N G C+
Sbjct: 989 LYNTHGPNCQ 998
>gi|403265441|ref|XP_003924947.1| PREDICTED: laminin subunit alpha-3 [Saimiri boliviensis
boliviensis]
Length = 3394
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 114/262 (43%), Gaps = 66/262 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 416 CNCHGHTSDCYYDPDVEQQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 475
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+C+P + + S GRC CK GD C++C V +Y+F C
Sbjct: 476 PVDAPDSCIPCSCDPEHADGCEQGS-GRCHCKLNFHGDNCEKCAVGYYNF-----PFCLR 529
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW---DLRRCKR 163
P + D V G D GN W +L +
Sbjct: 530 IPIFPISTPSPEDPVAG-------------------------DIKGN--WCDCNLEGIRP 562
Query: 164 DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
+ C++ GRC C+PGV G +CD C Y F C++C C+ GS +
Sbjct: 563 EI------------CDANGRCLCRPGVEGPRCDACRSGFYSF--PICQACWCSALGSYQ- 607
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
TP C SV GQCEC+ V G +C
Sbjct: 608 TP-CSSVTGQCECRPGVTGQRC 628
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ EG +C C+P V G +C RC HY
Sbjct: 1311 NSARSLVAFYHKGA----LPCECHPAGATGPHCSPEGGQCPCRPNVIGRQCTRCATGHYG 1366
Query: 96 FGEAGCKSCECNPAGSVKNTPNCD----SVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
F C+ C C + T C +V+ QCE + S +F P
Sbjct: 1367 FPH--CRPCSCGRHLCEEMTGQCRCPPRTVRPQCEVCETHSF-------------SFHPM 1411
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
+ C R G + L+C+ + G+C+CKP +TG +CDRC Y F E C
Sbjct: 1412 AG--CEACNCSRR----GTVEAAMLECDQDSGQCRCKPRITGQQCDRCASGFYRFPE--C 1463
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C CN G+ CD G C CK+NVEG +C
Sbjct: 1464 VPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1496
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS C+S G+C+C+PGVT
Sbjct: 569 GRCL-CRPGVEGPRCDACRSGFYSFP---ICQACWCSALGSYQTPCSSVTGQCECRPGVT 624
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
G +CDRC YDF S C+PAG+V
Sbjct: 625 GQRCDRCLSGAYDFPHCQGSSSACDPAGTV 654
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 99/247 (40%), Gaps = 56/247 (22%)
Query: 29 CQGDRDGPNCEKCRDNYYQ--------------------KSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCEKC YY +GD C+CN G
Sbjct: 505 CKLNFHGDNCEKCAVGYYNFPFCLRIPIFPISTPSPEDPVAGDIKGNWCDCNLEGIRPEI 564
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C++ GRC C+PGV G +CD C Y F C++C C+ GS + TP C SV GQCE
Sbjct: 565 CDANGRCLCRPGVEGPRCDACRSGFYSF--PICQACWCSALGSYQ-TP-CSSVTGQCE-- 618
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR----- 183
R V G R RC Y H + C+ G
Sbjct: 619 ---CRPGV--------------TGQRC---DRCLSGAYDFPHCQGSSSACDPAGTVDSNL 658
Query: 184 --CQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
CQCK V G C C +++ + GC C+C+ AG+V T C G C CK
Sbjct: 659 EYCQCKLHVEGPTCSICKPLYWNLDKDNPNGCSECQCHQAGTVSGTGECRQGDGDCHCKS 718
Query: 239 NVEGAQC 245
+V G C
Sbjct: 719 HVGGDSC 725
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1748 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCERCQEGYYGNAIHGSCRACPCP 1798
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1799 HTNSFATGCVVNGGNVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLG 1857
Query: 114 NTPNCDSVKGQC 125
+CD + G C
Sbjct: 1858 ---SCDPLTGDC 1866
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLN---LQCNSE-GRCQCKPGVTGDKCDRCDV 91
P CE C + + C ACNC+ G++ L+C+ + G+C+CKP +TG +CDRC
Sbjct: 1396 PQCEVCETHSFSFHPMAGCEACNCSRRGTVEAAMLECDQDSGQCRCKPRITGQQCDRCAS 1455
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1456 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1485
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL--QCNS-EGRCQCKPGVTG 83
C+ +GP C C+ Y+ DN C+ C C+ G+++ +C +G C CK V G
Sbjct: 663 CKLHVEGPTCSICKPLYWNLDKDNPNGCSECQCHQAGTVSGTGECRQGDGDCHCKSHVGG 722
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
D CD C+ ++ ++ GC+ C+C+ G++ + C G C+
Sbjct: 723 DSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSV--CSGASGMCQ 766
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+G C CK V GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C
Sbjct: 711 DGDCHCKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSV--CSGASGMCQCW 768
Query: 238 DNVEGAQCR 246
++V G C+
Sbjct: 769 EHVVGKACQ 777
>gi|149039662|gb|EDL93824.1| laminin, alpha 2 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 3115
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 122/254 (48%), Gaps = 37/254 (14%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C + +TG +C+ + G C++C+ + C CNC
Sbjct: 919 CNVNGSFSEIC------HRKTGQ----CECRPNVQGQRCDECKPETFGLQLGRGCIPCNC 968
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+ G+ NC+
Sbjct: 969 NSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCN 1023
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GQC ++ G +E + + G ++ C T GSL+ QCN
Sbjct: 1024 PKTGQCICPP-NTIGEKCSECLPNTWGHSIVTGCKV-----CNCSTV-----GSLSSQCN 1072
Query: 180 -SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK------- 231
+ G+C C P +G KC C+ H+++ C C+C G+ T + ++ K
Sbjct: 1073 INTGQCSCHPKFSGMKCSECNRGHWNY--PLCSLCDCFLPGTDATTCDSETRKCSCSDQT 1130
Query: 232 GQCECKDNVEGAQC 245
GQC CK NVEG C
Sbjct: 1131 GQCTCKVNVEGVHC 1144
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 111/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 815 NNFSPTCHLDRSL------GLICDECPVGYTGPRCERCAEGYFGQPSIPGGSCQPCLCND 868
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 869 ----NLDFSIPGSCDSLSGSCLICKPGTTGRFCELCADGY--FGDAVDAKNCQPCRCNVN 922
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C GQCE R N G R CK +T+ L
Sbjct: 923 GSFSEI--CHRKTGQCEC-----------------RPNVQ--GQRC---DECKPETFGLQ 958
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+
Sbjct: 959 LGRGCIPCNCNSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCTACDCSHL 1018
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NC+ GQC C N G +C
Sbjct: 1019 GN-----NCNPKTGQCICPPNTIGEKC 1040
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 72/196 (36%), Gaps = 59/196 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C +C N + S C CNC+ +GSL+ QCN + G+C C P +
Sbjct: 1027 GQCI-CPPNTIGEKCSECLPNTWGHSIVTGCKVCNCSTVGSLSSQCNINTGQCSCHPKFS 1085
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C+ H+++ C C+C G+ T CDS +C
Sbjct: 1086 GMKCSECNRGHWNY--PLCSLCDCFLPGTDATT--CDSETRKCS---------------- 1125
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C T G+C CK V G CDRC
Sbjct: 1126 ------------------CSDQT----------------GQCTCKVNVEGVHCDRCRPGK 1151
Query: 203 YDF---GEAGCKSCEC 215
+ GC SC C
Sbjct: 1152 FGLEAKNPLGCSSCYC 1167
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1493 CTACPRGYEGQYCERCAPGYAGSPSSPGGSCQECECDPYGSLPVPCDPVTGLCTCRPGAT 1552
Query: 83 GDKCDRCDVNH 93
G KCD C+ H
Sbjct: 1553 GRKCDGCEHGH 1563
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG G CDRC V Y G C+ C C+ GS N D G C CK+NVE
Sbjct: 439 GSCYCKPGFGGMNCDRC-VRGYR-GYPDCQPCNCSGLGST----NQDPCIGPCSCKENVE 492
Query: 242 GAQC 245
G C
Sbjct: 493 GEDC 496
>gi|15620873|dbj|BAB67800.1| KIAA1907 protein [Homo sapiens]
Length = 1737
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 405 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 460
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 461 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 510
Query: 143 QSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
D ++ C+ + +P G ++ C C+ V G CDRC
Sbjct: 511 ------DTCVPGAYNFPYCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDRCKPG 564
Query: 202 HYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ + GC C C+ G++ C GQC CK +V G C S
Sbjct: 565 FWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 613
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 111/274 (40%), Gaps = 45/274 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC G + C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 162 CNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPNH 221
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC + + GRC C+P +G++CD C G G SC
Sbjct: 222 PLDSPHVCRRCNCESDFTDGTCEDLTGRCYCRPNFSGERCDVCAE-----GFTGFPSCYP 276
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR-------KNFDPAGNRIWDLR 159
P+ S +T GQ + S+ G R R NF +
Sbjct: 277 TPSSS-NDTREQVLPAGQIVNCDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCEL---- 331
Query: 160 RCKRDTYPLG-------HGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
C Y G G + +C+ + G+C+C+ G G CDRC ++ F C+
Sbjct: 332 -CAPGFYGPGCQPCQCSSPGVADDRCDPDTGQCRCRVGFEGATCDRCAPGYFHF--PLCQ 388
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+PAG++ CD G+C C+ G C
Sbjct: 389 LCGCSPAGTLPE--GCDEA-GRCLCQPEFAGPHC 419
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1241 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1291
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1292 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1329
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1330 ECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1387
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1388 APGV--CDPLTGQCYCKENVQGPKC 1410
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 297 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 353
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL--- 168
+ CD GQC + R F+ A RC + PL
Sbjct: 354 D--RCDPDTGQC-----------------RCRVGFEGA-----TCDRCAPGYFHFPLCQL 389
Query: 169 ---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 390 CGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALDQL- 446
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 447 -CGA-GGLCRCRPGYTGTACQ 465
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C CKP V G
Sbjct: 549 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 608
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 609 QACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 651
>gi|395531391|ref|XP_003767762.1| PREDICTED: usherin-like [Sarcophilus harrisii]
Length = 2433
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG---- 50
C CN S C +D + Y++ G GG C +CQ + G NCE C+D +++ G
Sbjct: 575 CQCNNHSKSCHYDVTIDPFPDEYHQGG-GGVCENCQHNTTGRNCEMCKDYLFRQVGADPS 633
Query: 51 -DNFCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
+ C C+C +G+ N L C+ G +C CK V+G +C++C Y+ E GC
Sbjct: 634 AKDICKPCDCYEVGTKNGSLLCDQIGGQCNCKRHVSGRQCNQCQDGFYNLQELAPDGCSP 693
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C CN +G+V C GQC+ +G V LR R NF G + LR +
Sbjct: 694 CNCNTSGTVDGDITCHQNSGQCKC-----KGNV-IGLRC-DRCNF---GFK--SLRSFNK 741
Query: 164 DTYPLGH---GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
D H GS+N CN G+C+C G +CD C N Y GCK+C C+ G
Sbjct: 742 DGCEPCHCNINGSVNKFCNPLSGQCKCIKEAQGLQCDACVENFYGLDIGGCKACNCDAMG 801
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
++ T C + GQC CK NV G +C
Sbjct: 802 TLPGT-VCSAETGQCACKSNVGGRRC 826
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 115/235 (48%), Gaps = 26/235 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCNS-EGRCQC 77
GG C +C+ G C +C+D +Y Q+ + C+ CNCN G+++ + C+ G+C+C
Sbjct: 659 GGQC-NCKRHVSGRQCNQCQDGFYNLQELAPDGCSPCNCNTSGTVDGDITCHQNSGQCKC 717
Query: 78 KPGVTGDKCDRCDV---NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G +CDRC+ + F + GC+ C CN GSV C+ + GQC+ + ++G
Sbjct: 718 KGNVIGLRCDRCNFGFKSLRSFNKDGCEPCHCNINGSVNKF--CNPLSGQCKCIK-EAQG 774
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGD 193
+ + V++ D G + C D G C++E G+C CK V G
Sbjct: 775 -LQCDACVENFYGLDIGG-----CKACNCD----AMGTLPGTVCSAETGQCACKSNVGGR 824
Query: 194 KCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CD C +Y + C C C+ AG++ + CD GQC CK V G C
Sbjct: 825 RCDECLDGYYQLKQNNSFYCLPCNCDKAGTINASLLCDKSTGQCPCKTGVIGLHC 879
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 25/229 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSLN--LQCN-SEGRCQCKPGVTG 83
C+ + G C++C D YYQ +N +C CNC+ G++N L C+ S G+C CK GV G
Sbjct: 817 CKSNVGGRRCDECLDGYYQLKQNNSFYCLPCNCDKAGTINASLLCDKSTGQCPCKTGVIG 876
Query: 84 DKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
C+ C+ + Y+ GC++CEC+ G++ CD + GQC + +GR +
Sbjct: 877 LHCNHCEPHRYNLTINNLQGCQTCECDSLGTLTGA-ICDQISGQCPCLP-NHQGRQCNQC 934
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK-PGVTGDKCDRC 198
+ + GN+ L C T G+++ CN+ G+C C+ + G +CD C
Sbjct: 935 K---PGFYVSPGNKTGCLP-CSCHT-----AGAVHQVCNNLTGQCICQDASIIGQRCDHC 985
Query: 199 DVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+++ F C C C +G++ + C V GQC CK V G C
Sbjct: 986 KDHYFGFDPLAGRCYPCNCYLSGALNGS--CHLVTGQCFCKQFVTGLNC 1032
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 32/213 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQC--NSEGRCQCKPGVTGD 84
C+ G +C C + Y + +N C C C+ +G+L G+C C P G
Sbjct: 870 CKTGVIGLHCNHCEPHRYNLTINNLQGCQTCECDSLGTLTGAICDQISGQCPCLPNHQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV--HTEL 140
+C++C Y + GC C C+ AG+V C+++ GQC S G+ H +
Sbjct: 930 QCNQCKPGFYVSPGNKTGCLPCSCHTAGAVHQV--CNNLTGQCICQDASIIGQRCDHCK- 986
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLG--HGGSLNLQCN-SEGRCQCKPGVTGDKCDR 197
FDP R YP G+LN C+ G+C CK VTG CD
Sbjct: 987 --DHYFGFDPLAGR----------CYPCNCYLSGALNGSCHLVTGQCFCKQFVTGLNCDD 1034
Query: 198 C--DVNHYD----FGEAGCKSCECNPAGSVKNT 224
C D +H D FG + S + P G V+++
Sbjct: 1035 CVPDASHLDIHNLFGCSKTPSQQPPPRGQVQSS 1067
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 115/283 (40%), Gaps = 61/283 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGD--RDGPNCEKCRDNYYQK---SGDNF-- 53
CNC+G +N C + Y CL C D +G NC++C Y K GD
Sbjct: 518 CNCHGHANDCDMASKPYR-------CL-CSQDSYTEGRNCDRCLPLYNDKPFHQGDQIHA 569
Query: 54 --CTACNCN-------------PIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFG 97
C C CN P Q G C+ C+ TG C+ C Y F
Sbjct: 570 FNCKLCQCNNHSKSCHYDVTIDPFPDEYHQ-GGGGVCENCQHNTTGRNCEMC--KDYLFR 626
Query: 98 EAG--------CKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNF 148
+ G CK C+C G+ + CD + GQC +S R + + +
Sbjct: 627 QVGADPSAKDICKPCDCYEVGTKNGSLLCDQIGGQCNCKRHVSGRQCNQCQDGFYNLQEL 686
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSL--NLQCNS-EGRCQCKPGVTGDKCDRCDV---NH 202
P G C +T G++ ++ C+ G+C+CK V G +CDRC+ +
Sbjct: 687 APDG-----CSPCNCNT-----SGTVDGDITCHQNSGQCKCKGNVIGLRCDRCNFGFKSL 736
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F + GC+ C CN GSV C+ + GQC+C +G QC
Sbjct: 737 RSFNKDGCEPCHCNINGSVNKF--CNPLSGQCKCIKEAQGLQC 777
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C+ C+D+Y+ +G C CNC G+LN C+ G+C CK
Sbjct: 968 GQCICQDASIIGQRCDHCKDHYFGFDPLAGR--CYPCNCYLSGALNGSCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD----FGEAGCKSCECNPAGSVKNT 115
VTG CD C D +H D FG + S + P G V+++
Sbjct: 1026 FVTGLNCDDCVPDASHLDIHNLFGCSKTPSQQPPPRGQVQSS 1067
>gi|392334483|ref|XP_001062273.3| PREDICTED: laminin subunit alpha-2 [Rattus norvegicus]
gi|392343599|ref|XP_219866.6| PREDICTED: laminin subunit alpha-2 [Rattus norvegicus]
Length = 3121
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 122/254 (48%), Gaps = 37/254 (14%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C + +TG +C+ + G C++C+ + C CNC
Sbjct: 919 CNVNGSFSEIC------HRKTGQ----CECRPNVQGQRCDECKPETFGLQLGRGCIPCNC 968
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+ G+ NC+
Sbjct: 969 NSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCN 1023
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GQC ++ G +E + + G ++ C T GSL+ QCN
Sbjct: 1024 PKTGQCICPP-NTIGEKCSECLPNTWGHSIVTGCKV-----CNCSTV-----GSLSSQCN 1072
Query: 180 -SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK------- 231
+ G+C C P +G KC C+ H+++ C C+C G+ T + ++ K
Sbjct: 1073 INTGQCSCHPKFSGMKCSECNRGHWNY--PLCSLCDCFLPGTDATTCDSETRKCSCSDQT 1130
Query: 232 GQCECKDNVEGAQC 245
GQC CK NVEG C
Sbjct: 1131 GQCTCKVNVEGVHC 1144
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 111/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 815 NNFSPTCHLDRSL------GLICDECPVGYTGPRCERCAEGYFGQPSIPGGSCQPCLCND 868
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 869 ----NLDFSIPGSCDSLSGSCLICKPGTTGRFCELCADGY--FGDAVDAKNCQPCRCNVN 922
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C GQCE R N G R CK +T+ L
Sbjct: 923 GSFSEI--CHRKTGQCEC-----------------RPNVQ--GQRC---DECKPETFGLQ 958
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+
Sbjct: 959 LGRGCIPCNCNSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCTACDCSHL 1018
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NC+ GQC C N G +C
Sbjct: 1019 GN-----NCNPKTGQCICPPNTIGEKC 1040
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 72/196 (36%), Gaps = 59/196 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C +C N + S C CNC+ +GSL+ QCN + G+C C P +
Sbjct: 1027 GQCI-CPPNTIGEKCSECLPNTWGHSIVTGCKVCNCSTVGSLSSQCNINTGQCSCHPKFS 1085
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC C+ H+++ C C+C G+ T CDS +C
Sbjct: 1086 GMKCSECNRGHWNY--PLCSLCDCFLPGTDATT--CDSETRKCS---------------- 1125
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C T G+C CK V G CDRC
Sbjct: 1126 ------------------CSDQT----------------GQCTCKVNVEGVHCDRCRPGK 1151
Query: 203 YDF---GEAGCKSCEC 215
+ GC SC C
Sbjct: 1152 FGLEAKNPLGCSSCYC 1167
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1493 CTACPRGYEGQYCERCAPGYAGSPSSPGGSCQECECDPYGSLPVPCDPVTGLCTCRPGAT 1552
Query: 83 GDKCDRCDVNH 93
G KCD C+ H
Sbjct: 1553 GRKCDGCEHGH 1563
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG G CDRC V Y G C+ C C+ GS N D G C CK+NVE
Sbjct: 439 GSCYCKPGFGGMNCDRC-VRGYR-GYPDCQPCNCSGLGST----NQDPCIGPCSCKENVE 492
Query: 242 GAQC 245
G C
Sbjct: 493 GEDC 496
>gi|335295652|ref|XP_003130317.2| PREDICTED: laminin subunit beta-1 [Sus scrofa]
Length = 1786
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 102/231 (44%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ N
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCERCKPFYYQHPERDVRDPNL 394
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G+ CD C Y G
Sbjct: 395 CEPCTCDPAGSQNGGICDGYTDFSAGLIAGQCRCKLHVEGEHCDICKEGFYGLTAEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGYCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C+ + Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCSAESGQCLCRPHMIGRQCNEVESGFY 548
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 85/231 (36%), Gaps = 72/231 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G +C+ CR YY + C C CN +G++ CN + G+C
Sbjct: 995 GRCLKCLYHTEGVHCQLCRLGYYGDALQQDCRKCVCNYLGTVQEHCNGSDCQCDKTTGQC 1054
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N + GC+ C NCD+
Sbjct: 1055 LCLPNVIGQNCDRCAPNTWQLASGTGCEPC------------NCDAAH------------ 1090
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
+F P+ N G+CQC PG G
Sbjct: 1091 ------------SFGPSCNEF-------------------------TGQCQCMPGFGGRT 1113
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1114 CSECQELFWGDPSVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1162
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G KCDRC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRKCDRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK CEC+ GSV CD V GQC
Sbjct: 810 TFGFGPNGCKPCECHLQGSVNAF--CDPVTGQC 840
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 110/277 (39%), Gaps = 61/277 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG + C G C CQ G NCE+C YY
Sbjct: 867 CQCNGHAEDC---------DSVTGECSSCQDYTTGHNCERCLAGYYGDAIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
+SG F ++C +P+ +L L C C PG G +C+ C + + E G
Sbjct: 918 PCPDGPESGRQFASSCYQDPV-TLQLA------CVCNPGYIGSRCEDCAAGFFGNPSEVG 970
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WD 157
C+ C+C+ + CD G+C + G VH +L R + G+ + D
Sbjct: 971 GTCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEG-VHCQL---CRLGY--YGDALQQD 1024
Query: 158 LRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE-A 208
R+C + G++ CN + G+C C P V G CDRC N +
Sbjct: 1025 CRKCV-----CNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASGT 1079
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+ A S P+C+ GQC+C G C
Sbjct: 1080 GCEPCNCDAAHSFG--PSCNEFTGQCQCMPGFGGRTC 1114
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 121/291 (41%), Gaps = 67/291 (23%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F +E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFSEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN S L S G C C+ G C+RC +Y E
Sbjct: 328 NSNACKKCNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCERCKPFYYQHPER 387
Query: 100 G------CKSCECNPAGSVKNTPNCDS--------VKGQCESAQLSSRGRVHTELRVQSR 145
C+ C C+PAGS +N CD + GQC R ++H E
Sbjct: 388 DVRDPNLCEPCTCDPAGS-QNGGICDGYTDFSAGLIAGQC-------RCKLHVE-----G 434
Query: 146 KNFDPAGNRIWDLRRCKRDTY--------PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
++ D + L D + PLG N C+SE G C CK VTG CD
Sbjct: 435 EHCDICKEGFYGL--TAEDPFGCKSCACNPLGTIPGGN-PCDSETGYCYCKRLVTGQHCD 491
Query: 197 RCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C H+ GC+ C+C+ G++ N+ C + GQC C+ ++ G QC
Sbjct: 492 QCLPEHWGLSNDLDGCRPCDCDLGGALNNS--CSAESGQCLCRPHMIGRQC 540
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 103/245 (42%), Gaps = 44/245 (17%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G N C C C+ GS+N C+ G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRKCDRCAPGTF-GFGPNGCKPCECHLQGSVNAFCDPVTGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR------ 135
+CDRC ++ F C+ C+CN + +CDSV G+C S Q + G
Sbjct: 847 YARQCDRCLPGYWGF--PSCQPCQCN-----GHAEDCDSVTGECSSCQDYTTGHNCERCL 899
Query: 136 --VHTELRVQSRKNFDP--------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQ 185
+ + + S + P +G + C +D L + C
Sbjct: 900 AGYYGDAIIGSGDHCRPCPCPDGPESGRQF--ASSCYQDPVTL------------QLACV 945
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVE 241
C PG G +C+ C + + E G C+ C+C+ + CD G+C +C + E
Sbjct: 946 CNPGYIGSRCEDCAAGFFGNPSEVGGTCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTE 1005
Query: 242 GAQCR 246
G C+
Sbjct: 1006 GVHCQ 1010
>gi|395538235|ref|XP_003771090.1| PREDICTED: netrin-4 [Sarcophilus harrisii]
Length = 619
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FDK+++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 323 CKCNGHADTCHFDKDVWRASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 382
Query: 54 CTACNCNPIGSLNLQCNSE-------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P GS L S G C CKPGV G CD+C V ++ FGE GC+ C+C
Sbjct: 383 CKLCSCHPTGSAVLPFGSAPFCDPSNGDCPCKPGVAGPHCDKCMVGYWGFGEYGCRPCDC 442
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 443 --AGS------CDPLTGDCISS 456
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CD+C V ++ FGE GC+ C+C AGS CD + G C
Sbjct: 407 SNGDCPCKPGVAGPHCDKCMVGYWGFGEYGCRPCDC--AGS------CDPLTGDC 453
>gi|291389753|ref|XP_002711255.1| PREDICTED: laminin B1-like [Oryctolagus cuniculus]
Length = 625
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG + C FD ++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 329 CKCNGHAEACHFDINVWEASGNRSGGVCANCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 388
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 389 CKVCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 448
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 449 --AGS------CDPLTGDCISS 462
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 413 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 459
>gi|443714090|gb|ELU06658.1| hypothetical protein CAPTEDRAFT_189291 [Capitella teleta]
Length = 2157
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 98/216 (45%), Gaps = 43/216 (19%)
Query: 46 YQKSGDNF--CTACNCNPIGSL-NLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA-G 100
Y D F ACNC+ G++ N C+ G +C CKPGV C C V++Y F A G
Sbjct: 771 YSLMADVFSGAIACNCDQTGTVANTNCDPIGGQCNCKPGVMLLDCSICLVDYYGFDSAVG 830
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+C+P GSV+ + N D+ CE + S+
Sbjct: 831 CRPCDCHPTGSVRTSCN-DTGLCDCEPNVIGSK------------------------CGS 865
Query: 161 CKRDTYPLGHGG-----------SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG 209
C Y L G SLN C G+C CKPGV CDRCDV Y G
Sbjct: 866 CLDQYYGLSTGEGCQPCTCNATYSLNNDCADSGQCACKPGVGSKDCDRCDVGFYALTFDG 925
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C CEC+ G++ +P+CD G+C+CK + G +C
Sbjct: 926 CTDCECDALGTL--SPDCDPDTGKCDCKVRLVGDRC 959
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ + G C C D YY S C C CN SLN C G+C CKPGV CD
Sbjct: 853 DCEPNVIGSKCGSCLDQYYGLSTGEGCQPCTCNATYSLNNDCADSGQCACKPGVGSKDCD 912
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
RCDV Y GC CEC+ G++ +P+CD G+C+
Sbjct: 913 RCDVGFYALTFDGCTDCECDALGTL--SPDCDPDTGKCD 949
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C +C+ D G CE C Y+ + C CNC GS +C+ GRC CK V
Sbjct: 1369 GVCENCRNDTAGKECEICAQPYFGNAMQYSCKLCNCVNAGSTG-ECDPFSGRCICKDNVV 1427
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR-----VH 137
G++CD+C + +Y + + GC C CNP+G+ +T + D+ GQC L + GR V
Sbjct: 1428 GEQCDKCALLNYGYSDLGCLPCACNPSGATTDTCHVDT--GQCNCRDLVT-GRACDECVA 1484
Query: 138 TELRVQSRKNFDPAG 152
T V R DP G
Sbjct: 1485 TFYNVNPRTGCDPCG 1499
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
GRC CK V G++CD+C + +Y + + GC C CNP+G+ +T + D+ GQC C+D V
Sbjct: 1418 GRCICKDNVVGEQCDKCALLNYGYSDLGCLPCACNPSGATTDTCHVDT--GQCNCRDLVT 1475
Query: 242 GAQC 245
G C
Sbjct: 1476 GRAC 1479
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 41/209 (19%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C +C+ +C C +YY C C+C+P GS+ CN G C C+P V
Sbjct: 801 GGQC-NCKPGVMLLDCSICLVDYYGFDSAVGCRPCDCHPTGSVRTSCNDTGLCDCEPNVI 859
Query: 83 GDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G KC C +Y GC+ C CN S+ N +C +S Q + + V ++
Sbjct: 860 GSKCGSCLDQYYGLSTGEGCQPCTCNATYSLNN--DC------ADSGQCACKPGVGSK-- 909
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-----------EGRCQCKPGV 190
D RC Y L G + +C++ G+C CK +
Sbjct: 910 ---------------DCDRCDVGFYALTFDGCTDCECDALGTLSPDCDPDTGKCDCKVRL 954
Query: 191 TGDKCDRCDVNHY---DFGEAGCKSCECN 216
GD+CD C +++ ++ GC C C+
Sbjct: 955 VGDRCDTCQDSYFAKGNWSPEGCLPCYCS 983
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C CKPGV C C V++Y F A GC+ C+C+P GSV+ + N G C+C+ NV
Sbjct: 802 GQCNCKPGVMLLDCSICLVDYYGFDSAVGCRPCDCHPTGSVRTSCN---DTGLCDCEPNV 858
Query: 241 EGAQCRS 247
G++C S
Sbjct: 859 IGSKCGS 865
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 178 CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQ 233
CNS +G+C CK G +CD C ++ + GC++C CN AG+V N CD V G+
Sbjct: 433 CNSTDGQCFCKANTQGRRCDECKDQFWNLLASNVLGCQACTCNIAGTVDNM--CDKVSGK 490
Query: 234 CECKDNVEGAQCRS 247
C CK+N +G +C S
Sbjct: 491 CVCKNNTKGDRCDS 504
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 15 ELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNS- 71
+LYN G C C+ + G C++C+D ++ N C AC CN G+++ C+
Sbjct: 429 KLYNCNSTDGQCF-CKANTQGRRCDECKDQFWNLLASNVLGCQACTCNIAGTVDNMCDKV 487
Query: 72 EGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCEC 106
G+C CK GD+CD C ++D GC C C
Sbjct: 488 SGKCVCKNNTKGDRCDSCKEAYFDLSANNPDGCTPCNC 525
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY- 94
+C++C +Y + D CT C C+ +G+L+ C+ + G+C CK + GD+CD C +++
Sbjct: 910 DCDRCDVGFYALTFDG-CTDCECDALGTLSPDCDPDTGKCDCKVRLVGDRCDTCQDSYFA 968
Query: 95 --DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
++ GC C C+ ++ NC S G + QLSS + V+ R
Sbjct: 969 KGNWSPEGCLPCYCS-----GHSNNCTSATGWYQVVQLSSWNLLTGNSAVEGR 1016
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 97/268 (36%), Gaps = 62/268 (23%)
Query: 4 NGFSNRCFFDKELYNRTGHGGH-CLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTA 56
N F++ C D G G C+ C G +CE C +Y S +N C
Sbjct: 1303 NAFASSCVLD-------GDGSDICIGCAEGHQGEHCETCVTGFY-GSPENVTINGGRCVP 1354
Query: 57 CNCNPIGSLNLQCNS-EGRCQ-CKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVK 113
C CN C+S G C+ C+ G +C+ C ++ + + CK C C AGS
Sbjct: 1355 CECNDRAD---TCHSVSGVCENCRNDTAGKECEICAQPYFGNAMQYSCKLCNCVNAGS-- 1409
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
T CD G+C + V E +C Y G
Sbjct: 1410 -TGECDPFSGRC-----ICKDNVVGE-----------------QCDKCALLNYGYSDLGC 1446
Query: 174 LNLQCNSEG-----------RCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSV 221
L CN G +C C+ VTG CD C Y+ GC C C P G+
Sbjct: 1447 LPCACNPSGATTDTCHVDTGQCNCRDLVTGRACDECVATFYNVNPRTGCDPCGCVPEGTS 1506
Query: 222 KNTP---NCDSVKGQCEC-KDNVEGAQC 245
P CD + GQC C D + G C
Sbjct: 1507 NQFPFNGTCDVITGQCTCFSDGIIGRTC 1534
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 115/299 (38%), Gaps = 81/299 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-------DNF 53
C+C G ++ C TG+ CL CQ + G +CE C+D + K N
Sbjct: 282 CSCFGHASEC-------TSTGNNNQCL-CQHNTIGDHCEICKDLFNNKPWAMGIPDNPNP 333
Query: 54 CTACNCNPIGSLNLQCNSE-----GRC-QCKPGVTGDKCDRCDVNHY-------DFGEAG 100
C +C CN + +C+ + G C C G KC+ C VN Y ++ G
Sbjct: 334 CESCGCNEAYTGATRCHYDQTLGYGVCDDCGLQTRGQKCEEC-VNFYYINPRREEYAAGG 392
Query: 101 ----------------------CKSCECNPAGS-VKNTPNCDSVKGQCESAQLSSRGRVH 137
C C+C+ AGS NC+S GQC + +++GR
Sbjct: 393 GHPDDCQGFNGTSVEEYKCDKWCIPCDCSQAGSDADKLYNCNSTDGQC-FCKANTQGR-- 449
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-------HGGSLNLQCNS-EGRCQCKPG 189
D ++ W+L LG G+++ C+ G+C CK
Sbjct: 450 ---------RCDECKDQFWNLLASNV----LGCQACTCNIAGTVDNMCDKVSGKCVCKNN 496
Query: 190 VTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GD+CD C ++D GC C C GS K C + G C CK N+ G C
Sbjct: 497 TKGDRCDSCKEAYFDLSANNPDGCTPCNC-VLGSSK-VSVCPADTGICPCKANIRGRTC 553
>gi|339895924|ref|NP_001229974.1| laminin subunit beta-2 precursor [Danio rerio]
Length = 1782
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG SN+C FD +Y TG+ GG C +C + G NCE C+ YYQ +
Sbjct: 331 CNCNGHSNQCHFDMAVYLATGNISGGVCDNCLHNTMGSNCESCKPFYYQDPTRDIRDPGV 390
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C AC+C+P GS N G+C+CK V G +CD+C + + G
Sbjct: 391 CVACDCDPDGSKNGGVCDGHDDPSLGMIAGQCRCKDNVEGSRCDKCKPGFFGLSASDPRG 450
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+C+P G+V + CD V G C +L + + L + D +G R
Sbjct: 451 CQPCKCDPRGTVSGSSQCDPVSGDCFCKRLVTGHSCNQCLPEHWALSHDTSG-----CRG 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+ QC+ E G+CQC+ + G +C++ + ++
Sbjct: 506 CDCDV-----GGATENQCSMETGQCQCRSHMIGRQCNQVESGYF 544
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 87/186 (46%), Gaps = 25/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE---------GR 74
G CL C + +GP+C CR YY + C C CN +G+ QC S G+
Sbjct: 989 GQCLKCLYNTEGPDCSVCRSGYYGDASRRNCRKCTCNFLGTERSQCLSRDDCVCQRATGQ 1048
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CQC P V G CD C N ++ GC+ C C+P + T C+ GQC+ ++
Sbjct: 1049 CQCLPNVIGQTCDHCAPNSWNLASGQGCEPCACDPNNAY--TSACNEFTGQCQ-CRVGFG 1105
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
G+ T+ Q DP R+ R C D P G S QCN G C C+ GV+G
Sbjct: 1106 GKTCTD--CQENHWGDP---RVL-CRAC--DCDPRGIESS---QCNRMTGHCVCQQGVSG 1154
Query: 193 DKCDRC 198
+CD+C
Sbjct: 1155 VRCDQC 1160
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
AC C+P GSL+ +C+ G +C+C+P ++G +C++C Y FG +GCK CEC+ GS
Sbjct: 766 ACECDPQGSLSSECDVRGGQCRCRPNISGRRCEKCAPGAYGFGPSGCKLCECSLEGS--Q 823
Query: 115 TPNCDSVKGQC 125
+ CD GQC
Sbjct: 824 SRFCDLYSGQC 834
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 110/270 (40%), Gaps = 46/270 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C + RTG CL+C+ + G CE+C + YY C C
Sbjct: 861 CQCNGHADEC------HQRTGA---CLNCRSNTAGDKCERCANGYYGNPVLGLGSQCRPC 911
Query: 58 NC----NPIGSLNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCE 105
C N C + R C C G TG +CD C ++ D + G C+ C
Sbjct: 912 PCPEGPNSGRHFAASCYQDNRSQQVVCNCNQGYTGPRCDECAPGYFGDPSKPGGQCQPCR 971
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ + + +CD GQC ++ G + V + A R + R+C +
Sbjct: 972 CSNNIDLSDPESCDKRTGQCLKCLYNTEG---PDCSVCRSGYYGDASRR--NCRKCTCNF 1026
Query: 166 YPLGHGGSLNLQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCEC 215
G+ QC S G+CQC P V G CD C N ++ GC+ C C
Sbjct: 1027 L-----GTERSQCLSRDDCVCQRATGQCQCLPNVIGQTCDHCAPNSWNLASGQGCEPCAC 1081
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+P + T C+ GQC+C+ G C
Sbjct: 1082 DPNNAY--TSACNEFTGQCQCRVGFGGKTC 1109
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 100/236 (42%), Gaps = 28/236 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + G CEKC Y G + C C C+ GS + C+ G+C C+PG
Sbjct: 783 GGQC-RCRPNISGRRCEKCAPGAY-GFGPSGCKLCECSLEGSQSRFCDLYSGQCPCRPGA 840
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CD C H+ F C+ C+CN + C G C L+ R +
Sbjct: 841 YGQRCDGCQAGHWGF--PNCRPCQCN-----GHADECHQRTGAC----LNCRSNTAGDKC 889
Query: 142 VQSRKNFDPAGNRIWDL-RRCKRDTYPLG--HGGSLNLQCNSEGR-----CQCKPGVTGD 193
+ + GN + L +C+ P G G C + R C C G TG
Sbjct: 890 ERCANGY--YGNPVLGLGSQCRPCPCPEGPNSGRHFAASCYQDNRSQQVVCNCNQGYTGP 947
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+CD C ++ D + G C+ C C+ + + +CD GQC +C N EG C
Sbjct: 948 RCDECAPGYFGDPSKPGGQCQPCRCSNNIDLSDPESCDKRTGQCLKCLYNTEGPDC 1003
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQC+ G G C C NH+ C++C+C+P G + C+ + G C C+ V
Sbjct: 1096 GQCQCRVGFGGKTCTDCQENHWGDPRVLCRACDCDPRGI--ESSQCNRMTGHCVCQQGVS 1153
Query: 242 GAQC 245
G +C
Sbjct: 1154 GVRC 1157
>gi|344269998|ref|XP_003406833.1| PREDICTED: laminin subunit alpha-1 [Loxodonta africana]
Length = 3080
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 106/242 (43%), Gaps = 54/242 (22%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C + YY S C CNC+ GS + C EG+C C GV G++CD
Sbjct: 925 DCKPHVTGRQCDRCLNGYYGWSTGLGCRPCNCSASGSTSDDCTDEGQCHCVLGVAGERCD 984
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y + + C C+C +NT CD G+C HT
Sbjct: 985 RCARGFYAYQDGSCTPCDC---AHTQNT--CDPESGECICPP-------HT--------- 1023
Query: 148 FDPAGNRIWDLR-------RCKRDTYPLG-------HGGSLNLQCNS-EGRCQCKPGVTG 192
W L+ RD LG GS + QC++ GRCQCKP G
Sbjct: 1024 --------WGLKCEECEDGYWGRD-LELGCKACNCSSVGSASHQCDALTGRCQCKPAFEG 1074
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
C RC + H DF C SC+C+ G++ +T + C+ G C CK+NV G QC
Sbjct: 1075 PSCGRCTLGHRDF--PACVSCDCDLRGTLVDTCDHEKGLCSCEEETGTCSCKENVHGLQC 1132
Query: 246 RS 247
+
Sbjct: 1133 ST 1134
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 110/238 (46%), Gaps = 47/238 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ G +CE+C +Y GD C C C+ GSL+ C+ E G C CK
Sbjct: 871 GECLKCIGNTGGAHCERCAHGFY---GDAVTAKNCRPCECHEKGSLSRVCHHETGLCDCK 927
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CDRC +Y + GC+ C C+ +GS + +C +GQC H
Sbjct: 928 PHVTGRQCDRCLNGYYGWSTGLGCRPCNCSASGSTSD--DCTD-EGQC-----------H 973
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------GSLNLQCNSE-GRCQCKPG 189
L V AG R RC R Y G C+ E G C C P
Sbjct: 974 CVLGV--------AGERC---DRCARGFYAYQDGSCTPCDCAHTQNTCDPESGECICPPH 1022
Query: 190 VTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ ++ D E GCK+C C+ GS + CD++ G+C+CK EG C
Sbjct: 1023 TWGLKCEECEDGYWGRDL-ELGCKACNCSSVGSASH--QCDALTGRCQCKPAFEGPSC 1077
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + N+ GG C++CQ + G NCE C D YY+
Sbjct: 330 CNCHSKAKDCYYDENVANQQRSLNTAGQFQGGGVCINCQQNTMGINCETCIDGYYRPHKV 389
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
DN C C+C+ +GSL+ C + G+C C+ G G+KCDRC +
Sbjct: 390 SPYEDNPCHPCDCDSVGSLSSVCIKDDLHSDSHNGKWPGQCPCREGYAGEKCDRCQFGYK 449
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
G C CEC+PAGSV + P
Sbjct: 450 --GYPHCVRCECSPAGSVNDDP 469
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C G CE+C D Y+ + + C ACNC+ +GS + QC++ GRCQCKP
Sbjct: 1015 GECI-CPPHTWGLKCEECEDGYWGRDLELGCKACNCSSVGSASHQCDALTGRCQCKPAFE 1073
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C RC + H DF C SC+C+ G++ +T CD KG C
Sbjct: 1074 GPSCGRCTLGHRDF--PACVSCDCDLRGTLVDT--CDHEKGLC 1112
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
C+CN S C D E G CL+C G+ G +C+ C +Y K +GD C
Sbjct: 1406 CDCNNHSQAC--DPE-------TGKCLNCSGNTTGDHCDTCAPGFYGKVTGSAGD--CAL 1454
Query: 57 CNC--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCEC 106
C C +P S + C EG RC C PG G C+RC + ++ C+ CEC
Sbjct: 1455 CTCPHSPPASFSPTCVLEGHGDFRCDACFPGYEGQYCERCSLGYHGNPRVPGGSCQKCEC 1514
Query: 107 NPAGSVKNTPNCDSVKGQC 125
+P GS + CD + GQC
Sbjct: 1515 SPRGSAHGS--CDGISGQC 1531
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 101/238 (42%), Gaps = 28/238 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC---NPIGSLNLQCNS----EG 73
G C C + G +CE+C +Y + C C C P + + C+ +
Sbjct: 758 GVCFACIHNTTGDHCEQCLPGFYGVPSRGTPGDCQPCACPLSTPSNNFSPTCHVDDGDQV 817
Query: 74 RC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C QC PG TG C RC +Y C C C+ +CDSV G+C
Sbjct: 818 LCDQCAPGYTGAWCQRCADGYYGNPTVPGGSCTPCNCSGNVDPSEAGHCDSVTGECLKC- 876
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKP 188
+ + G H E + F + R C+ GSL+ C+ E G C CKP
Sbjct: 877 IGNTGGAHCE---RCAHGFYGDAVTAKNCRPCE-----CHEKGSLSRVCHHETGLCDCKP 928
Query: 189 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG +CDRC +Y + GC+ C C+ +GS + +C +GQC C V G +C
Sbjct: 929 HVTGRQCDRCLNGYYGWSTGLGCRPCNCSASGSTSD--DCTD-EGQCHCVLGVAGERC 983
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ G G+KCDRC + G C CEC+PAGSV + P + C CK+NVE
Sbjct: 428 GQCPCREGYAGEKCDRCQFGYK--GYPHCVRCECSPAGSVNDDPCTEP----CACKENVE 481
Query: 242 GAQC 245
G C
Sbjct: 482 GKHC 485
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 97/268 (36%), Gaps = 68/268 (25%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNP 61
N FS C D G C C G C++C D YY CT CNC
Sbjct: 803 NNFSPTCHVDD------GDQVLCDQCAPGYTGAWCQRCADGYYGNPTVPGGSCTPCNC-- 854
Query: 62 IGSLNLQCNSEGRC--------QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
S N+ + G C +C G C+RC H +G+A C+ CEC+
Sbjct: 855 --SGNVDPSEAGHCDSVTGECLKCIGNTGGAHCERC--AHGFYGDAVTAKNCRPCECHEK 910
Query: 110 GSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
GS+ C G C+ ++ R RC Y
Sbjct: 911 GSLSRV--CHHETGLCDCKPHVTGR-----------------------QCDRCLNGYYGW 945
Query: 169 GHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
G GS + C EG+C C GV G++CDRC Y + + C C+C
Sbjct: 946 STGLGCRPCNCSASGSTSDDCTDEGQCHCVLGVAGERCDRCARGFYAYQDGSCTPCDC-- 1003
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+NT CD G+C C + G +C
Sbjct: 1004 -AHTQNT--CDPESGECICPPHTWGLKC 1028
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 6 FSNRCFFDKELYNRTGHGGH-CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPI 62
FS C + GHG C C +G CE+C Y+ + C C C+P
Sbjct: 1465 FSPTCVLE-------GHGDFRCDACFPGYEGQYCERCSLGYHGNPRVPGGSCQKCECSPR 1517
Query: 63 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 121
GS + C+ G+C C+PG TG +CDRC+ H E+ C SC+ G + N + D++
Sbjct: 1518 GSAHGSCDGISGQCVCRPGATGLRCDRCEPRHI-LVESDCVSCDDECVGVLLN--DMDNI 1574
Query: 122 KGQCESAQLS 131
S LS
Sbjct: 1575 GDAILSVNLS 1584
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 176 LQCNSEGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVK 231
L+ + + RC C PG G C+RC + ++ C+ CEC+P GS + CD +
Sbjct: 1471 LEGHGDFRCDACFPGYEGQYCERCSLGYHGNPRVPGGSCQKCECSPRGSAHGS--CDGIS 1528
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 1529 GQCVCRPGATGLRC 1542
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C+ Y G C C C+P GS+N +E C CK V G CDR
Sbjct: 432 CREGYAGEKCDRCQFGY---KGYPHCVRCECSPAGSVNDDPCTEP-CACKENVEGKHCDR 487
Query: 89 CDVNHYDFGE---AGCKSCEC 106
C Y+ E GC C C
Sbjct: 488 CKSGFYNLKERNPQGCSECFC 508
>gi|149051074|gb|EDM03247.1| laminin, beta 1 (predicted) [Rattus norvegicus]
Length = 1010
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G++CD C YD G
Sbjct: 443 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPFG 502
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R L + D G R
Sbjct: 503 CKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDG-----CRP 557
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 558 CDCDL-----GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 596
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GSV + CD+V
Sbjct: 827 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSV--SAFCDAV 884
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 885 TGQCHCFQGIYARQC 899
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 74/180 (41%), Gaps = 38/180 (21%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 798 PMTDVCRNIIFSISALIHQAGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 857
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
+ FG GCK C+C+ GSV + CD+V GQC Q + +R+ D
Sbjct: 858 TFGFGPNGCKPCDCHLQGSV--SAFCDAVTGQCHCFQ-----------GIYARQC-DRCL 903
Query: 153 NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR---------CQCKPGVTGDKCDRCDVNHY 203
W C+ QCN C+ TG C+RC +Y
Sbjct: 904 PGFWGFPSCQ------------PCQCNGHAEDCDTVTGECLSCQDYTTGHNCERCLAGYY 951
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS++ C++ G+C C G+
Sbjct: 837 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPNGCKPCDCHLQGSVSAFCDAVTGQCHCFQGI 894
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
+CDRC + F C+ C+CN + +CD+V G+C S Q + G
Sbjct: 895 YARQCDRCLPGFWGF--PSCQPCQCN-----GHAEDCDTVTGECLSCQDYTTG 940
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS++ C++ G+C C G+ +CDRC + F C+ C+CN + +CD+V
Sbjct: 875 GSVSAFCDAVTGQCHCFQGIYARQCDRCLPGFWGF--PSCQPCQCN-----GHAEDCDTV 927
Query: 231 KGQC-ECKDNVEGAQC 245
G+C C+D G C
Sbjct: 928 TGECLSCQDYTTGHNC 943
>gi|390348792|ref|XP_787259.3| PREDICTED: laminin subunit beta-1 [Strongylocentrotus purpuratus]
Length = 1668
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 106/265 (40%), Gaps = 82/265 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNF 53
CNCN + C FD+ +Y T GG C +C + G NCE+C+ ++ N
Sbjct: 333 CNCNDHATSCHFDEAVYRLTNGASGGVCDNCLHNTVGRNCEQCKPFFFMHPDRDIRDPNI 392
Query: 54 CTACNCNPIGSLNL-QCNSE-------GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCK 102
C CNC+P GS N +C S G C CK VTG +CD C +++ EA GC+
Sbjct: 393 CVPCNCDPAGSENGGECASHTQGEMVAGMCLCKRYVTGQRCDTCQDGYWELNEANPEGCR 452
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
C C+ GS +N CD G C RCK
Sbjct: 453 ECACDLLGS-ENNMGCDKSTGNC----------------------------------RCK 477
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGS 220
R VTG CDRC +Y GCK CEC+P GS
Sbjct: 478 R-------------------------YVTGQNCDRCYEGYYGLSADLYGCKQCECDPGGS 512
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
N+ C+ GQC C+ N+ QC
Sbjct: 513 YNNS--CNQASGQCPCRRNIGERQC 535
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 87/194 (44%), Gaps = 34/194 (17%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-------- 72
G CL C + DG NCE+C +Y + C C CN +G+ QC+ +
Sbjct: 984 ARSGKCLQCLYNTDGFNCEQCAPGFYGDAIQRTCRDCQCNVLGTDRSQCDLDNNCGVCDP 1043
Query: 73 --GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
G+C C P V G +CDRC +H+ GC++C C P G+V + CD GQC A
Sbjct: 1044 VSGQCPCLPNVLGQQCDRCAQDHWKLASGTGCEACNCCPYGAVSS--RCDEFTGQC--AC 1099
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLR----RCKRDTYPLGHGGSLNLQCN-SEGRC 184
S G R+ D N D R C D GS QC + G+C
Sbjct: 1100 RSGFG---------GRECCDCEANFWGDPRDGCYECDCD-----EQGSATSQCERATGQC 1145
Query: 185 QCKPGVTGDKCDRC 198
C PGVTG +CD+C
Sbjct: 1146 VCLPGVTGYRCDQC 1159
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 65/280 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
CNCNG ++ C G C+DCQ + G CE C+ YY
Sbjct: 859 CNCNGHADIC---------DPRTGECIDCQSNTAGFECESCKRGYYGDPTRGSALPCQAC 909
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGE 98
SG+ F +C + Q +C C G TG +CD+CD N++
Sbjct: 910 LCPGGAGSGNQFAESCQLD-------QATQTVQCDCFSGYTGIRCDQCDNNYFGNPTEAR 962
Query: 99 AGCKSCECNPAGSVKNTP-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
C C CN ++ +TP NCD+ G+C ++ G + E Q F G+ I
Sbjct: 963 GVCNLCSCN-GNTLSSTPGNCDARSGKCLQCLYNTDG-FNCE---QCAPGF--YGDAIQR 1015
Query: 158 L-RRCKRDTYPLGHGGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDFG 206
R C+ + G+ QC+ + G+C C P V G +CDRC +H+
Sbjct: 1016 TCRDCQCNVL-----GTDRSQCDLDNNCGVCDPVSGQCPCLPNVLGQQCDRCAQDHWKLA 1070
Query: 207 E-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC++C C P G+V + CD GQC C+ G +C
Sbjct: 1071 SGTGCEACNCCPYGAVSS--RCDEFTGQCACRSGFGGREC 1108
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + C++ + S F C C+P GSL+ C+ G +CQCKP V G C++C
Sbjct: 742 PLSDICKELMFSMSALAFDGALPCQCDPTGSLSNMCDETGGQCQCKPNVIGRTCNQCAPG 801
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y FG GC C+C+ GS+ C+ + GQC
Sbjct: 802 TYGFGPEGCTPCDCDGTGSLNEF--CNQLTGQC 832
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQCKP V G C++C Y FG GC C+C+ GS+ C+ +
Sbjct: 771 GSLSNMCDETGGQCQCKPNVIGRTCNQCAPGTYGFGPEGCTPCDCDGTGSLNEF--CNQL 828
Query: 231 KGQCECKDNVEGAQC 245
GQC C+ N G QC
Sbjct: 829 TGQCPCRPNTYGQQC 843
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 101/247 (40%), Gaps = 56/247 (22%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGD-----NFCTACNCNPIGSLNLQCNS-EGRC-QCKPG 80
DC G C++C +NY+ + N C+ CN N + S C++ G+C QC
Sbjct: 937 DCFSGYTGIRCDQCDNNYFGNPTEARGVCNLCS-CNGNTLSSTPGNCDARSGKCLQCLYN 995
Query: 81 VTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVK-------NTPNCDSVKGQCESAQLSS 132
G C++C Y D + C+ C+CN G+ + N CD V GQC
Sbjct: 996 TDGFNCEQCAPGFYGDAIQRTCRDCQCNVLGTDRSQCDLDNNCGVCDPVSGQC------- 1048
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLR--RCKRDTYPLGHG-----------GSLNLQCN 179
P + + RC +D + L G G+++ +C+
Sbjct: 1049 -----------------PCLPNVLGQQCDRCAQDHWKLASGTGCEACNCCPYGAVSSRCD 1091
Query: 180 S-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C C+ G G +C C+ N + GC C+C+ GS T C+ GQC C
Sbjct: 1092 EFTGQCACRSGFGGRECCDCEANFWGDPRDGCYECDCDEQGSA--TSQCERATGQCVCLP 1149
Query: 239 NVEGAQC 245
V G +C
Sbjct: 1150 GVTGYRC 1156
>gi|157119736|ref|XP_001659481.1| laminin A chain, putative [Aedes aegypti]
gi|108875197|gb|EAT39422.1| AAEL008773-PA [Aedes aegypti]
Length = 3701
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 121/268 (45%), Gaps = 53/268 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G SN C + +E+ + GG C +CQ + +G NC KC++ +Y+ G
Sbjct: 339 CNCHGHSNECIYSEEIDEKQLSLDIHGNYEGGGVCQNCQHNTEGINCNKCKNTFYRPYGK 398
Query: 52 NF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C CNC+ S C E GRC+C+P CD C H FG C+ CE
Sbjct: 399 RWDEVDVCQPCNCDHFYSTG-NCEEETGRCECRPEFNPPNCDSCSYGH--FGYPNCRPCE 455
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-----GNRIWDLRR 160
CN G++ +C+++ G+C + NF A N +D
Sbjct: 456 CNLNGTIGY--HCEAINGECP-----------------CKPNFGGAHCKQCANGYYDFPE 496
Query: 161 CKRDTYPLG--HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
C+ P G GS++ C+ G+CQCKP G C++C Y++ C C C+
Sbjct: 497 CE----PCGCNEIGSVSDVCDFGSGQCQCKPNFAGQHCEKCKNGFYNY--PSCTYCNCDS 550
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ CD GQC C++ G +C
Sbjct: 551 RGTLDEV--CDKGNGQCLCREGYGGPRC 576
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 103/230 (44%), Gaps = 34/230 (14%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C C YYQ C CNC+ GS+ L CN+EG+CQC G C++
Sbjct: 612 CLPNFSGRQCTMCLPGYYQYPE---CLPCNCDVHGSIGLSCNNEGQCQCAYNFDGKTCNQ 668
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQS 144
C + Y+F C+ C C+PAG + C SV QC + RVH + +
Sbjct: 669 CKESFYNF--PACEECNCDPAGVIAKFAGCGSVPAGELCQC-------KERVHGRICDKC 719
Query: 145 RKNFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
R + W+L + + G G+L+ G+C CKP VTG +C C
Sbjct: 720 RPLY-------WNLNASNPHGCQDCECFIDGTIGALDTCDTKSGQCACKPSVTGRQCSEC 772
Query: 199 DVNHYD-FGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D FG + GCK C C+ GS N C+ GQC+C V G C
Sbjct: 773 KDGTFDLFGASLFGCKDCGCDIGGSANNV--CNKETGQCKCHPRVTGRTC 820
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 107/233 (45%), Gaps = 37/233 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ GP C++C YY C CNC+ GS++ C+ G+C C P +G
Sbjct: 563 GQCL-CREGYGGPRCDQCIPGYYNYPD---CVPCNCSGAGSVSTVCDVTGKCSCLPNFSG 618
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+C C +Y + E C C C+ GS+ + N + GQC+ A + G+ + + +
Sbjct: 619 RQCTMCLPGYYQYPE--CLPCNCDVHGSIGLSCNNE---GQCQCA-YNFDGKTCNQCK-E 671
Query: 144 SRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
S NF DPAG I C + P G CQCK V G C
Sbjct: 672 SFYNFPACEECNCDPAG-VIAKFAGCG--SVPAGE------------LCQCKERVHGRIC 716
Query: 196 DRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D+C +++ + GC+ CEC G++ CD+ GQC CK +V G QC
Sbjct: 717 DKCRPLYWNLNASNPHGCQDCECFIDGTIGALDTCDTKSGQCACKPSVTGRQC 769
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 105/258 (40%), Gaps = 47/258 (18%)
Query: 22 HGGHCL-------------------DCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC 59
+GG+C+ +CQ G +CE C + YY + N C C C
Sbjct: 1803 YGGYCVPCQCNGHAETCDCNTGICSECQHYTTGDHCELCVEGYYGNATRGSPNDCMICAC 1862
Query: 60 N-PIGSLNLQCN-------SEGRCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNP 108
P+ S N E C+CKPG TG+KC C + E C+ CEC+
Sbjct: 1863 PLPVDSNNFATTCDVSEDGYEIHCECKPGYTGEKCQSCAPGFFGQPEVEGEVCRQCECSG 1922
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
+ + +CDSV G+C ++ GR F + D + C D
Sbjct: 1923 NINPEEPGSCDSVSGECLLCLNNTFGRACN----LCAPGFYGDAVNLKDCQSCICDAVGT 1978
Query: 169 GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNC 227
H N G C C P V G+KCDRC+ +HY F GC C+C G N+ C
Sbjct: 1979 EHCD------NFIGTCNCYPNVIGEKCDRCEDDHYGFESGRGCTPCDC---GIASNSTQC 2029
Query: 228 DSVKGQCECKDNVEGAQC 245
D G+C CK V G QC
Sbjct: 2030 DDHTGKCACKPGVTGRQC 2047
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C + G C++C D++Y CT C+C I S + QC+ G+C CKPGVTG +C
Sbjct: 1989 NCYPNVIGEKCDRCEDDHYGFESGRGCTPCDCG-IASNSTQCDDHTGKCACKPGVTGRQC 2047
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
DRC+ ++++ E GC+ C CN S C+++ GQCE
Sbjct: 2048 DRCEPGYWNYTEDGCQPCSCNTDYS--RGLGCNALTGQCE 2085
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL-----QCNSEGRCQCKPGVTG 83
C + DG C +C++++Y C CNC+P G + + CQCK V G
Sbjct: 657 CAYNFDGKTCNQCKESFYNFPA---CEECNCDPAGVIAKFAGCGSVPAGELCQCKERVHG 713
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
CD+C +++ + GC+ CEC G++ CD+ GQC + + S GR +E
Sbjct: 714 RICDKCRPLYWNLNASNPHGCQDCECFIDGTIGALDTCDTKSGQC-ACKPSVTGRQCSEC 772
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCD 199
+ FD G ++ + C D GGS N CN E G+C+C P VTG C
Sbjct: 773 K---DGTFDLFGASLFGCKDCGCDI-----GGSANNVCNKETGQCKCHPRVTGRTCTYPL 824
Query: 200 VNHY 203
HY
Sbjct: 825 TTHY 828
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CKPGVTG +CDRC+ ++++ E GC+ C CN S C+++ GQCEC V
Sbjct: 2034 GKCACKPGVTGRQCDRCEPGYWNYTEDGCQPCSCNTDYS--RGLGCNALTGQCECLSGVV 2091
Query: 242 GAQCRS 247
G +C S
Sbjct: 2092 GEKCDS 2097
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 37/215 (17%)
Query: 41 CRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
C++ + + D A CNC+ GS + +C G +C CKP + G +C+ C +Y F
Sbjct: 1357 CKEAVFSLTADYNTGALPCNCDYYGSNSFECEQFGGQCNCKPFIIGRQCEACKTGYYGFP 1416
Query: 98 EAGCKSCECNPAGSV--KNTPNC---DSVKGQ-CESAQLSSRGRVHTELRVQSRKNFDPA 151
+ CK C+C P+ ++ K+T C D V G+ C+ + G
Sbjct: 1417 D--CKPCDC-PSTALCQKDTGECICPDRVTGEKCDQCMPYTFGY---------------- 1457
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
++I C + +PLG + NLQC+ E G C CK V G CD C ++F C
Sbjct: 1458 -DQIIGCEEC--NCHPLGVANN-NLQCDLESGVCDCKSNVVGRSCDHCQFGFFNF--PYC 1511
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C+C+ G+ CD C CK NV+G +C
Sbjct: 1512 EPCKCDIRGTTFEI--CDQNDETCFCKKNVQGREC 1544
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 85/207 (41%), Gaps = 45/207 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C + G C C +Y GD C +C C+ +G+ + N G C C P
Sbjct: 1937 GECLLCLNNTFGRACNLCAPGFY---GDAVNLKDCQSCICDAVGTEHCD-NFIGTCNCYP 1992
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G+KCDRC+ +HY F GC C+C G N+ CD G+C + + GR
Sbjct: 1993 NVIGEKCDRCEDDHYGFESGRGCTPCDC---GIASNSTQCDDHTGKC-ACKPGVTGR--- 2045
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNS-EGRCQCK 187
RC+ + G S L CN+ G+C+C
Sbjct: 2046 ------------------QCDRCEPGYWNYTEDGCQPCSCNTDYSRGLGCNALTGQCECL 2087
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCE 214
GV G+KCD C + GC+ C+
Sbjct: 2088 SGVVGEKCDSCPYRWVLIPDTGCQECD 2114
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
GRC+C+P CD C H FG C+ CECN G++ +C+++ G+C CK N
Sbjct: 425 GRCECRPEFNPPNCDSCSYGH--FGYPNCRPCECNLNGTIGY--HCEAINGECPCKPNFG 480
Query: 242 GAQCR 246
GA C+
Sbjct: 481 GAHCK 485
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
H G C C+ G C++C Y+ + D C C+CN S L CN+ G+C+C G
Sbjct: 2032 HTGKCA-CKPGVTGRQCDRCEPGYWNYTEDG-CQPCSCNTDYSRGLGCNALTGQCECLSG 2089
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCE 105
V G+KCD C + GC+ C+
Sbjct: 2090 VVGEKCDSCPYRWVLIPDTGCQECD 2114
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 93/228 (40%), Gaps = 36/228 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ + + F ++ GG C +C+ G CE C+ YY G C C+C
Sbjct: 1375 CNCDYYGSNSFECEQF------GGQC-NCKPFIIGRQCEACKTGYY---GFPDCKPCDC- 1423
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPN 117
S L G C C VTG+KCD+C Y FG GC+ C C+P G N
Sbjct: 1424 --PSTALCQKDTGECICPDRVTGEKCDQC--MPYTFGYDQIIGCEECNCHPLGVANNNLQ 1479
Query: 118 CDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
CD G C+ + + R H + + +P CK D G + +
Sbjct: 1480 CDLESGVCDCKSNVVGRSCDHCQFGFFNFPYCEP----------CKCDI----RGTTFEI 1525
Query: 177 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSV 221
++ C CK V G +C++C Y+ + GC C C SV
Sbjct: 1526 CDQNDETCFCKKNVQGRECNQCVDGTYNLQASNPEGCTKCFCFGHTSV 1573
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 77/189 (40%), Gaps = 24/189 (12%)
Query: 71 SEGRCQCKPGVTGDKCDRCDVNHY--DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCE 126
S RC C PG TG C+ C +Y G G C C+CN + CD G C
Sbjct: 1773 SVERCSCPPGYTGLSCEDCAPGYYRDPNGPYGGYCVPCQCN-----GHAETCDCNTGICS 1827
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-HGGSLNLQCNS----- 180
Q + G H EL V+ G+ C PL + C+
Sbjct: 1828 ECQHYTTGD-HCELCVEGYYGNATRGSP----NDCMICACPLPVDSNNFATTCDVSEDGY 1882
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQC-EC 236
E C+CKPG TG+KC C + E C+ CEC+ + + +CDSV G+C C
Sbjct: 1883 EIHCECKPGYTGEKCQSCAPGFFGQPEVEGEVCRQCECSGNINPEEPGSCDSVSGECLLC 1942
Query: 237 KDNVEGAQC 245
+N G C
Sbjct: 1943 LNNTFGRAC 1951
>gi|449669716|ref|XP_002161535.2| PREDICTED: laminin subunit beta-1-like [Hydra magnipapillata]
Length = 842
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 56 ACNCNPIGSLN-LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSV 112
AC CN +GS+N CN G+C CK + G C C +Y+F GC C CN GS+
Sbjct: 536 ACGCNSLGSINSYVCNIYGGQCNCKENIYGRTCMSCLPQYYNFSSGLGCVPCNCNEDGSL 595
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
+CD GQC+ + GR + +Q +G CK +
Sbjct: 596 NQ--DCDYNTGQCQ-CNPNVIGRTCNQCALQYFGISTGSG--------CKPCLCSALYAT 644
Query: 173 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
S QC+ G+CQCKPGV KC+ C YD +GCK+C CNP G+ N C+ G
Sbjct: 645 S--SQCDESGQCQCKPGVGSLKCESCAPGFYDLSVSGCKTCLCNPIGTAGN--KCNPTTG 700
Query: 233 QCECKDNVEGAQC 245
C CKD V G +C
Sbjct: 701 SCTCKDLVMGVKC 713
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 97/215 (45%), Gaps = 27/215 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
+GG C +C+ + G C C YY S C CNCN GSLN C+ + G+CQC P
Sbjct: 553 YGGQC-NCKENIYGRTCMSCLPQYYNFSSGLGCVPCNCNEDGSLNQDCDYNTGQCQCNPN 611
Query: 81 VTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G C++C + ++ +GCK C C + + CD GQC+ G + E
Sbjct: 612 VIGRTCNQCALQYFGISTGSGCKPCLC--SALYATSSQCDE-SGQCQCKP--GVGSLKCE 666
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
+ +G + C + P+G G+ +CN + G C CK V G KCD+C
Sbjct: 667 SCAPGFYDLSVSG-----CKTCLCN--PIGTAGN---KCNPTTGSCTCKDLVMGVKCDQC 716
Query: 199 DVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSV 230
+ +Y F C C C+ T CD+V
Sbjct: 717 TIGYYGFSSDFPNTCLKCYCS-----GKTSECDAV 746
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 110/261 (42%), Gaps = 34/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--SGDNFCTACN 58
C CNG SN+C E Y G C+ CQ + DG NCE+CR + K + C +C+
Sbjct: 73 CVCNGMSNQC--SPEDY------GTCI-CQKNTDGKNCERCRSLFNNKPWTFGQPCESCS 123
Query: 59 CNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYD------FGEAGCKSCECNPA 109
CN + + G CQ C GDKCD C V +Y F + C SC C +
Sbjct: 124 CNSHSTSCVYDATKKYGVCQNCMDNTMGDKCDLCAVGYYRNVGKQLFDKNTCISCNCFMS 183
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
G + + C+ V G+C + V + F + L C Y
Sbjct: 184 GVLFGSSVCNQVTGRCF-----CKSNVDGTFCNTCKDGFYGLSATV--LNGCNACGCYRF 236
Query: 169 GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTP 225
G + G C CK G TG C C ++ + + C+ C C+P+GSV T
Sbjct: 237 GTINGSAVCDKLTGVCPCKIGFTGRTCADCKPLYFSYPTSNPSECRPCNCDPSGSVNMT- 295
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
CD GQC C+ N G++C
Sbjct: 296 -CDK-SGQCLCRQNYFGSRCE 314
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 89/214 (41%), Gaps = 25/214 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NFCT 55
C+CN S C +Y+ T G C +C + G C+ C YY+ G N C
Sbjct: 122 CSCNSHSTSC-----VYDATKKYGVCQNCMDNTMGDKCDLCAVGYYRNVGKQLFDKNTCI 176
Query: 56 ACNCNPIGSL--NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPA 109
+CNC G L + CN GRC CK V G C+ C Y GC +C C
Sbjct: 177 SCNCFMSGVLFGSSVCNQVTGRCFCKSNVDGTFCNTCKDGFYGLSATVLNGCNACGCYRF 236
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
G++ + CD + G C ++ GR + + F + + R C D
Sbjct: 237 GTINGSAVCDKLTGVCP-CKIGFTGRTCADCK---PLYFSYPTSNPSECRPCNCD----- 287
Query: 170 HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
GS+N+ C+ G+C C+ G +C++ +
Sbjct: 288 PSGSVNMTCDKSGQCLCRQNYFGSRCEQIRTGFF 321
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 182 GRCQ-CKPGVTGDKCDRCDVNHYD------FGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
G CQ C GDKCD C V +Y F + C SC C +G + + C+ V G+C
Sbjct: 140 GVCQNCMDNTMGDKCDLCAVGYYRNVGKQLFDKNTCISCNCFMSGVLFGSSVCNQVTGRC 199
Query: 235 ECKDNVEGAQCRS 247
CK NV+G C +
Sbjct: 200 FCKSNVDGTFCNT 212
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDS 229
GSLN C+ + G+CQC P V G C++C + ++ +GCK C C + + CD
Sbjct: 593 GSLNQDCDYNTGQCQCNPNVIGRTCNQCALQYFGISTGSGCKPCLC--SALYATSSQCDE 650
Query: 230 VKGQCECKDNVEGAQCRS 247
GQC+CK V +C S
Sbjct: 651 -SGQCQCKPGVGSLKCES 667
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 87/217 (40%), Gaps = 24/217 (11%)
Query: 42 RDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--GRCQCKPGVTGDKCDRCDVNH----YD 95
R Y+ + +C CN + + QC+ E G C C+ G C+RC +
Sbjct: 58 RKFYFAVRDVDIQASCVCNGMSN---QCSPEDYGTCICQKNTDGKNCERCRSLFNNKPWT 114
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
FG+ C+SC CN + S + G C++ ++ G V +N G ++
Sbjct: 115 FGQP-CESCSCN-SHSTSCVYDATKKYGVCQNCMDNTMGDKCDLCAVGYYRN---VGKQL 169
Query: 156 WDLRRCKR---DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+D C + G S+ CN GRC CK V G C+ C Y
Sbjct: 170 FDKNTCISCNCFMSGVLFGSSV---CNQVTGRCFCKSNVDGTFCNTCKDGFYGLSATVLN 226
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC +C C G++ + CD + G C CK G C
Sbjct: 227 GCNACGCYRFGTINGSAVCDKLTGVCPCKIGFTGRTC 263
>gi|449480957|ref|XP_004177244.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-4 [Taeniopygia
guttata]
Length = 1902
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 32/217 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN S+RC FD +Y +G GG C DCQ + G +C++C+ ++YQ +
Sbjct: 471 CNCNSHSSRCHFDMAVYQASGGVSGGVCEDCQDNTTGQHCDRCKPSFYQDPLKDISDPRP 530
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P GSL+ C S GRC CK V G +CD+C N+Y + G
Sbjct: 531 CLPCSCDPEGSLHEGVCESRTDPTLGTVAGRCPCKENVEGTRCDKCKANYYGLSSSDPLG 590
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C C+P GS+ + CD G+C + ++ R L + GN ++
Sbjct: 591 CQPCNCDPLGSLPFS-VCDPATGECLCQRFTTGQRCEKCL-----AGYWGLGNSLYGCSP 644
Query: 161 CKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCD 196
C D GGS N C+ +G+C+C P + +C+
Sbjct: 645 CDCDI-----GGSQNNLCSLKDGQCECLPNIVSRQCN 676
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N AC CNP GSLN C+ G +CQCK V G CD C Y FG GC +CEC+P G
Sbjct: 905 NGAVACKCNPQGSLNASCSKLGGQCQCKVNVVGRCCDTCSAGSYGFGFHGCYACECHPQG 964
Query: 111 SVKNTPNCDSVKGQC 125
S+ CD V GQC
Sbjct: 965 SLSTL--CDQVTGQC 977
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSLN C+ G +CQCK V G CD C Y FG GC +CEC+P GS+ CD V
Sbjct: 916 GSLNASCSKLGGQCQCKVNVVGRCCDTCSAGSYGFGFHGCYACECHPQGSLSTL--CDQV 973
Query: 231 KGQCECKDNVEGAQC 245
GQC C+ V G +C
Sbjct: 974 TGQCSCRREVGGQRC 988
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 123/290 (42%), Gaps = 63/290 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHG-----GHCLDCQGDRDGPNCEKCRDNY-------YQK 48
C CNG +++C + L H G C+ C + +G +CE+C+D Y +
Sbjct: 404 CFCNGHASQCDSIQNLRGDVFHQSGMVHGRCI-CHHNTEGFSCERCKDFYNDAPWRPAEG 462
Query: 49 SGDNFCTACNCNPIGS---LNLQCN------SEGRCQ-CKPGVTGDKCDRCDVNHY---- 94
+ DN C CNCN S ++ S G C+ C+ TG CDRC + Y
Sbjct: 463 TQDNACKRCNCNSHSSRCHFDMAVYQASGGVSGGVCEDCQDNTTGQHCDRCKPSFYQDPL 522
Query: 95 -DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
D + C C C+P GS+ +G CES + G V R ++N + G
Sbjct: 523 KDISDPRPCLPCSCDPEGSLH--------EGVCESRTDPTLGTVAG--RCPCKENVE--G 570
Query: 153 NRIWDLRRCKRDTY------PLG-------HGGSLNLQC--NSEGRCQCKPGVTGDKCDR 197
R +CK + Y PLG GSL + G C C+ TG +C++
Sbjct: 571 TRC---DKCKANYYGLSSSDPLGCQPCNCDPLGSLPFSVCDPATGECLCQRFTTGQRCEK 627
Query: 198 CDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C ++ G + GC C+C+ GS N C GQCEC N+ QC
Sbjct: 628 CLAGYWGLGNSLYGCSPCDCDIGGSQNNL--CSLKDGQCECLPNIVSRQC 675
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 102/239 (42%), Gaps = 22/239 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQC---------NSEG 73
G CL+C+G G +CE+C D YY D C C C + N +++
Sbjct: 1018 GECLNCRGFTAGSHCERCMDGYYGNPLDGEPCHPCMCPGAPTSNRYFARSCYQDSQSAQL 1077
Query: 74 RCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C C G +G +CD+C Y + G C C CN + + +C+ V G+C
Sbjct: 1078 VCNCLEGYSGKQCDKCPSGFYKNLSSPGLDCAPCPCNNNIDLTDPESCNRVTGECTKCLH 1137
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRC-KRDTYP-LGHGGSLNLQCN-SEGRCQCK 187
++ G + F A N+ C +P + GG C+ + G C C
Sbjct: 1138 NTHG---ANCQFCKPGYFGSALNQSCQSCTCNSAGVHPAMCPGGDAACLCDPATGACPCL 1194
Query: 188 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P V G CD+C ++D GC++C+C+P S N C+ + GQC CK G C
Sbjct: 1195 PNVLGATCDQCASGYWDLASGKGCQTCDCDPKNSQSN--QCNQLTGQCPCKPGYSGRFC 1251
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 93
G C++C Y+ + C C+C+P S + QCN G+C CKPG +G C+ C+ N+
Sbjct: 1199 GATCDQCASGYWDLASGKGCQTCDCDPKNSQSNQCNQLTGQCPCKPGYSGRFCNECEENY 1258
Query: 94 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ + C SCECN G+ P CD G C
Sbjct: 1259 FGNPQMHCISCECNLEGT--RQPTCDKATGAC 1288
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 77/197 (39%), Gaps = 46/197 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN----------SEG 73
G C C + G NC+ C+ Y+ + + C +C CN G C + G
Sbjct: 1130 GECTKCLHNTHGANCQFCKPGYFGSALNQSCQSCTCNSAGVHPAMCPGGDAACLCDPATG 1189
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P V G CD+C ++D GC++C+C+P S N C+ + GQC S
Sbjct: 1190 ACPCLPNVLGATCDQCASGYWDLASGKGCQTCDCDPKNSQSN--QCNQLTGQCPCKPGYS 1247
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR--------- 183
GR E C+ + + ++ +CN EG
Sbjct: 1248 -GRFCNE---------------------CEENYFGNPQMHCISCECNLEGTRQPTCDKAT 1285
Query: 184 --CQCKPGVTGDKCDRC 198
C C+ GV+G CD C
Sbjct: 1286 GACICRAGVSGRLCDHC 1302
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 104/243 (42%), Gaps = 42/243 (17%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C+ C Y G + C AC C+P GSL+ C+ G+C C+ V
Sbjct: 926 GGQC-QCKVNVVGRCCDTCSAGSY-GFGFHGCYACECHPQGSLSTLCDQVTGQCSCRREV 983
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE-- 139
G +C RC + FG C+ C CN + CD + G+C + + + G H E
Sbjct: 984 GGQRCSRCLAGY--FGFPHCRPCPCNGHAEL-----CDPLTGECLNCRGFTAGS-HCERC 1035
Query: 140 LRVQSRKNFD------------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCK 187
+ D P NR + R C +D+ S L CN C
Sbjct: 1036 MDGYYGNPLDGEPCHPCMCPGAPTSNRYFA-RSCYQDSQ------SAQLVCN------CL 1082
Query: 188 PGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGA 243
G +G +CD+C Y + G C C CN + + +C+ V G+C +C N GA
Sbjct: 1083 EGYSGKQCDKCPSGFYKNLSSPGLDCAPCPCNNNIDLTDPESCNRVTGECTKCLHNTHGA 1142
Query: 244 QCR 246
C+
Sbjct: 1143 NCQ 1145
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
QCN G+C CKPG +G C+ C+ N++ + C SCECN G+ P CD G C
Sbjct: 1232 QCNQLTGQCPCKPGYSGRFCNECEENYFGNPQMHCISCECNLEGT--RQPTCDKATGACI 1289
Query: 236 CKDNVEGAQC 245
C+ V G C
Sbjct: 1290 CRAGVSGRLC 1299
>gi|47209921|emb|CAF94661.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1051
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 112/265 (42%), Gaps = 39/265 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNF 53
C CNG + RC FD Y +G GG C DC GP C++C Y Q +
Sbjct: 292 CECNGHARRCHFDLATYEASGRRSGGVCEDCMHHTTGPKCDRCAPGYQPNPRSQMDRPDA 351
Query: 54 CTACNCNPIGSL-NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPA 109
C C C+ G++ N QC++ CQCK V G +CDRC ++ GC C C+
Sbjct: 352 CIRCPCSTEGTVENGQCDTASSCQCKVNVEGPRCDRCKRGYFGLSTVNPLGCSKCSCSSE 411
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF-----DPAGNRIWDLRRCKR- 163
GSV + CD V GQC R NF D N W R
Sbjct: 412 GSVSDA--CDPVTGQC-----------------LCRPNFHGPNCDVCSNGYWKPFLSDRC 452
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ GS + C+ G+C C+P G C C N + + C+ C+C+ G++
Sbjct: 453 EPCKCDPTGSYSNTCDQVTGQCHCRPHFGGRTCTECPDNMFGDPPSRCQPCQCDLEGTLA 512
Query: 223 NTPNCDSVKGQCECKDNVEGAQCRS 247
C+ G C C+ V G++C S
Sbjct: 513 E--GCNKQTGACLCRPGVTGSRCTS 535
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 117/283 (41%), Gaps = 65/283 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY-------YQKSGDNF 53
C C+G +NRC D C DCQ + G NCE+C D + ++ +
Sbjct: 230 CMCHGHANRCLPDSTAQEGMQVNPRC-DCQHNTAGMNCERCDDLFNDLPWRPAEEGNTHT 288
Query: 54 CTACNCNPIGS---LNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA---- 99
C C CN +L S G C+ C TG KCDRC + +
Sbjct: 289 CQRCECNGHARRCHFDLATYEASGRRSGGVCEDCMHHTTGPKCDRCAPGYQPNPRSQMDR 348
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
C C C+ G+V+N GQC++A S + +V+ E G R
Sbjct: 349 PDACIRCPCSTEGTVEN--------GQCDTAS-SCQCKVNVE------------GPRC-- 385
Query: 158 LRRCKRDTY------PLG-------HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
RCKR + PLG GS++ C+ G+C C+P G CD C ++
Sbjct: 386 -DRCKRGYFGLSTVNPLGCSKCSCSSEGSVSDACDPVTGQCLCRPNFHGPNCDVCSNGYW 444
Query: 204 D-FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F C+ C+C+P GS NT CD V GQC C+ + G C
Sbjct: 445 KPFLSDRCEPCKCDPTGSYSNT--CDQVTGQCHCRPHFGGRTC 485
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 35 GPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 91
G C +C DN + GD + C C C+ G+L CN + G C C+PGVTG +C C
Sbjct: 482 GRTCTECPDNMF---GDPPSRCQPCQCDLEGTLAEGCNKQTGACLCRPGVTGSRCTSCSR 538
Query: 92 NHYD 95
H D
Sbjct: 539 GHCD 542
>gi|410055412|ref|XP_003954422.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Pan
troglodytes]
Length = 1758
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 510 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 565
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 566 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 615
Query: 143 QSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
D ++ C+ + +P G ++ C C+ V G CDRC
Sbjct: 616 ------DTCVPGAYNFPYCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDRCKPG 669
Query: 202 HYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ + GC C C+ G++ C GQC CK +V G C S
Sbjct: 670 LWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 718
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 116/318 (36%), Gaps = 81/318 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC G + C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 262 CNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPNH 321
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC----------------- 89
+ C CNC + + GRC C+P +G++CD C
Sbjct: 322 PLDSPHVCRRCNCESDFTDGTCEDLTGRCYCRPNFSGERCDVCAEGFTGFPSCYPTPSSS 381
Query: 90 -DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
D +C+C+ AG+ N D G+C L + T + + +
Sbjct: 382 NDTREQVLPAGQIVNCDCSAAGTQGNACRXDPRVGRC----LCNPXLPGTHCELCAPXFY 437
Query: 149 DPAGNRIWDLR-----------RCKRDT-----------------------YPL------ 168
P + I RC DT +PL
Sbjct: 438 GPGCSVIPSPPCQCSSPGVADDRCDLDTGQCRCRAGFEGATCDRCAPGYFHFPLCQLCGC 497
Query: 169 GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++ C
Sbjct: 498 SPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALDQL--CG 553
Query: 229 SVKGQCECKDNVEGAQCR 246
+ G C C+ G C+
Sbjct: 554 A-GGLCRCRPGYTGTACQ 570
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1148 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1198
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1199 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1236
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1237 ECNCSGPGVQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1294
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1295 APGV--CDPLTGQCYCKENVQGPRC 1317
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 21/137 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1574 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFVSSREDPSAPCVSCP 1624
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1625 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1684
Query: 110 GSVKNT-PNCDSVKGQC 125
G +CD + G C
Sbjct: 1685 GDPNLLFSDCDPLTGAC 1701
>gi|334325858|ref|XP_001365508.2| PREDICTED: laminin subunit alpha-3 [Monodelphis domestica]
Length = 3369
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 110/228 (48%), Gaps = 24/228 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ GP C+ C +Y C AC C+P+GS C+ G+C+C+PG+T
Sbjct: 534 GKCL-CRFGVGGPKCDSCSSGFYSFPA---CQACQCSPLGSYQTTCDPGTGQCECRPGIT 589
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C YDF S ECNP G++ DS G C+ QL G + +
Sbjct: 590 GRLCDQCLSGAYDFPHCQGSSSECNPLGTM------DSSSGFCQ-CQLYVEGPTCS---I 639
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
++ AG C+ D G +C EG C CKP V GD C+ C+
Sbjct: 640 CKPLYWNLAGENPDGCSECQCDVTGTLSGVG---ECEQREGECYCKPHVCGDSCNACEDG 696
Query: 202 HYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+Y ++ GC+ C C+ GS+ + CD + G C+C++++ G C+
Sbjct: 697 YYALEDSNYFGCQGCHCDVGGSISSV--CDDLSGACQCREHIMGKSCQ 742
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 121/267 (45%), Gaps = 47/267 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC+G + C++D ++ G GG C++CQ + G NCE+C YY+
Sbjct: 352 CNCHGHATDCYYDPDIERLKGSLNIHGVYEGGGVCINCQHNTAGVNCERCLQGYYRPYNV 411
Query: 49 --SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+CNP + + GRC CKP G+ C+ C +Y+F C +C+C
Sbjct: 412 PVEAPHGCMPCSCNPEYTDGCE-QGTGRCICKPNFRGENCEHCAKGYYNF--PFCLTCQC 468
Query: 107 NPAGSVKNTPNCDSVKGQC--------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
G+ +CD G+C S + + G H QS++
Sbjct: 469 YGIGAAPG--DCDRKTGRCFCQPGFHGFSCEECAVGYFHYPF-CQSKQQHS--------- 516
Query: 159 RRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
C+ ++ G + C+ G+C C+ GV G KCD C Y F C++C+C+P
Sbjct: 517 -GCECNSV-----GVTSEICDFHGKCLCRFGVGGPKCDSCSSGFYSF--PACQACQCSPL 568
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS + T CD GQCEC+ + G C
Sbjct: 569 GSYQTT--CDPGTGQCECRPGITGRLC 593
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC------TACNCNPIGSLNLQCNSEGRCQC 77
G C CQ G +CE+C Y+ FC + C CN +G + C+ G+C C
Sbjct: 483 GRCF-CQPGFHGFSCEECAVGYFHYP---FCQSKQQHSGCECNSVGVTSEICDFHGKCLC 538
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
+ GV G KCD C Y F C++C+C+P GS + T CD GQCE + GR+
Sbjct: 539 RFGVGGPKCDSCSSGFYSF--PACQACQCSPLGSYQTT--CDPGTGQCE-CRPGITGRL- 592
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTY---PLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
D + +D C+ + PLG S S G CQC+ V G
Sbjct: 593 ----------CDQCLSGAYDFPHCQGSSSECNPLGTMDS------SSGFCQCQLYVEGPT 636
Query: 195 CDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C +++ GC C+C+ G++ C+ +G+C CK +V G C
Sbjct: 637 CSICKPLYWNLAGENPDGCSECQCDVTGTLSGVGECEQREGECYCKPHVCGDSC 690
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 96/201 (47%), Gaps = 31/201 (15%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C+C+ +G++N C+ EG +CQC+ V G +C RC +Y F CK C C
Sbjct: 1290 NNGALPCDCHVMGAINPTCHPEGGQCQCRTNVIGRQCTRCQTGYYGF--PFCKLCHCGRR 1347
Query: 110 GSVKNTPNCD----SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
+ T C +VK QCE + QS G ++ + C R
Sbjct: 1348 LCDEMTGKCICPPRTVKPQCEVCE------------KQSFSYHPLVGCKVCN---CSR-- 1390
Query: 166 YPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
+G + +C+ + G+C+CKP +TG +CDRC Y F E C C CN G+
Sbjct: 1391 --IGAINATAPECDKNNGQCRCKPRITGRQCDRCTSGFYRFPE--CIPCNCNRDGTEPGV 1446
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD G C CK+NVEGA+C
Sbjct: 1447 --CDPWTGTCLCKENVEGAEC 1465
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G NCE+C++ YY + C C C
Sbjct: 1718 CNCNGHSNRC---------QDGSGTCINCQHNTAGTNCERCKEGYYGDALHGSCRVCPCP 1768
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G +C CKPG G +C+RC ++ FG C+ C CN G +
Sbjct: 1769 HTNSFATGCVVNGVNVKCSCKPGYVGAQCERCAPGYFGNPQKFG-GSCQPCNCNNNGQLT 1827
Query: 114 NTPNCDSVKGQC 125
+CD + G C
Sbjct: 1828 ---SCDPLTGDC 1836
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKPGVTGDKCDRCDV 91
P CE C + C CNC+ IG++N + G+C+CKP +TG +CDRC
Sbjct: 1365 PQCEVCEKQSFSYHPLVGCKVCNCSRIGAINATAPECDKNNGQCRCKPRITGRQCDRCTS 1424
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1425 GFYRFPE--CIPCNCNRDGTEPGV--CDPWTGTC 1454
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 12/140 (8%)
Query: 35 GPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 91
G +C C D YY N+ C C+C+ GS++ C+ G CQC+ + G C + ++
Sbjct: 687 GDSCNACEDGYYALEDSNYFGCQGCHCDVGGSISSVCDDLSGACQCREHIMGKSCQQPEI 746
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVK---GQCESAQLSSRGRVH-TELRVQSRKN 147
N+Y F + E TPN V+ E S RG T ++ + R
Sbjct: 747 NYY-FPDLHHMKFEIEDG----TTPNGRGVRFGFDPMEFPDFSWRGYAQMTSVQNEVRVT 801
Query: 148 FDPAGNRIWDLRRCKRDTYP 167
+ R + R R P
Sbjct: 802 LNVEKTRQYLFRAILRYINP 821
>gi|324499520|gb|ADY39795.1| Laminin-like protein epi-1 [Ascaris suum]
Length = 3676
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 30/228 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C++C YY +C C+C GS + C++ G+C CKP G++CD+
Sbjct: 624 CYANFTGRQCDRCAAGYYDYP---YCKPCSCLASGSKGMTCDNHGQCYCKPNFQGERCDQ 680
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C +N Y+F C+ C CNP+G V + CD V G+ + + + GR+ Q +
Sbjct: 681 CKINFYNF--PICEECNCNPSGVVASFAGCDKVAPGELCTCRANVIGRICD----QCKPT 734
Query: 148 FDPAGNRIWDLRRCKRD-------TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
F WDL+ + P G LN+ G+C CK V G +C+RC
Sbjct: 735 F-------WDLQYQHPEGCISCSCNLP-GTVSMLNVCDPLNGQCFCKRHVAGRRCERCAD 786
Query: 201 NHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y+ + + GC CEC+ G++ CD GQC C+ + G C
Sbjct: 787 GFYELESYSQLGCHPCECDIGGALGV--GCDMHTGQCRCRPRITGRAC 832
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 103/228 (45%), Gaps = 33/228 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C+ + G +C+ C D Y+ C C+C+ G+ CN + G C CK G
Sbjct: 528 GQCV-CKPNFGGLSCDVCADGYFDYPK---CEYCDCDASGTEESICNKTNGICLCKAGFA 583
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELR 141
G +CD+CDV Y G CK C CN GS CD G C A + R
Sbjct: 584 GRRCDQCDVAFY--GYPNCKPCGCNSIGS--KVLECDPKSGDCPCYANFTGR-------- 631
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLG--HGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
D +D CK P GS + C++ G+C CKP G++CD+C
Sbjct: 632 -----QCDRCAAGYYDYPYCK----PCSCLASGSKGMTCDNHGQCYCKPNFQGERCDQCK 682
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQC 245
+N Y+F C+ C CNP+G V + CD V C C+ NV G C
Sbjct: 683 INFYNF--PICEECNCNPSGVVASFAGCDKVAPGELCTCRANVIGRIC 728
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 116/269 (43%), Gaps = 54/269 (20%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G S C +D +L + GG CL+C+ + +G NC KC Y++ G
Sbjct: 349 CNCHGHSEHCEYDADLDKNHLSLDIHGNYEGGGRCLNCRDNTEGINCNKCAPGYFRPRGK 408
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC+ C+CKP G+ CD C +Y E CK CEC
Sbjct: 409 FWNDTDVCQPCNCDATKHTGTCAEETAICECKPQFIGENCDECASGYYSPPE--CKPCEC 466
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ G++ +T C + GQC + N+D A + C
Sbjct: 467 SLNGTIDDT--CLPLNGQCP-----------------CKTNYDGAF-----CQSCAPGFT 502
Query: 167 PLGHG---------GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
L G GSLN C+ S G+C CKP G CD C ++D+ + C+ C+C+
Sbjct: 503 NLPAGCIECECDEMGSLNSNCSESSGQCVCKPNFGGLSCDVCADGYFDYPK--CEYCDCD 560
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+G+ ++ C+ G C CK G +C
Sbjct: 561 ASGTEESI--CNKTNGICLCKAGFAGRRC 587
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 114/274 (41%), Gaps = 61/274 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG S C D G C DCQ + G +CE CR+ +Y
Sbjct: 1826 CECNGHSGSCDADT---------GICYDCQHETYGDHCELCREGFYGNATTASPYSCLPC 1876
Query: 47 ----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 99
+ +NF +C + G L C CKPG + ++C+RCDV + FGE
Sbjct: 1877 ACPHPSASNNFALSCQVSETGILE-------SCTCKPGYSSERCERCDVGY--FGEPLRL 1927
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
C+ C+CN + +C + G C+ ++ GR H E Q G+ I
Sbjct: 1928 GGSCEECDCNENNDLSLEGSCHPISGDCDLCLNNTDGR-HCEHCAQWYY-----GDAI-S 1980
Query: 158 LRRCKR---DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSC 213
+ C D H GS + N+ G+C C P V G CDRC + + F + GC+ C
Sbjct: 1981 AKNCTECSCD-----HCGS-SYCNNTSGKCVCHPLVDGPNCDRCVEDAWGFSKCHGCQMC 2034
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C A S +P C GQC C G +C +
Sbjct: 2035 NCALASS---SPQCHQETGQCACMPGSTGLRCEA 2065
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C+ C DGPNC++C ++ + S + C CNC + S + QC+ E G+C C PG T
Sbjct: 2002 GKCV-CHPLVDGPNCDRCVEDAWGFSKCHGCQMCNC-ALASSSPQCHQETGQCACMPGST 2059
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +C+ C ++++G GCK C+C S+ CD + GQC
Sbjct: 2060 GLRCEACQHGYWNYGPFGCKKCDCEADLSLGTV--CDVITGQC 2100
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+C+CN GS + C G +C C+P V G +CDRC HY F E C C C +
Sbjct: 1406 SCDCNSQGSTSFSCKEYGGQCLCRPNVIGRRCDRCAPGHYSFPE--CIKCRC------PD 1457
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELR-----VQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
+ CD GQC H E + V +DP L C+ +P
Sbjct: 1458 SHLCDEHSGQCYCPP-------HVEGKQCDRCVPYAFGYDP-------LIGCQLCGCHPN 1503
Query: 169 GHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G G LQC+ + G+C CK V KCD+C Y F C C C G+ + C
Sbjct: 1504 GSEGG-QLQCDPNNGQCLCKANVGARKCDKCLPGFYGFSH--CYECACETKGTTEEI--C 1558
Query: 228 DSVKGQCECKDNVEGAQC 245
D C+CK NV G C
Sbjct: 1559 DETTALCKCKKNVIGDSC 1576
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 91/199 (45%), Gaps = 29/199 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
G C C + DG +CE C YY S N CT C+C+ GS + N+ G+C C P V
Sbjct: 1953 GDCDLCLNNTDGRHCEHCAQWYYGDAISAKN-CTECSCDHCGS-SYCNNTSGKCVCHPLV 2010
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G CDRC + + F + GC+ C C A S +P C GQC S T L
Sbjct: 2011 DGPNCDRCVEDAWGFSKCHGCQMCNCALASS---SPQCHQETGQCACMPGS------TGL 2061
Query: 141 RVQS----RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
R ++ N+ P G + D C+ D SL C+ G+C C+ G TG +C
Sbjct: 2062 RCEACQHGYWNYGPFGCKKCD---CEADL-------SLGTVCDVITGQCHCQEGATGPRC 2111
Query: 196 DRCDVNHYDFGEAGCKSCE 214
D+C + GC+ C+
Sbjct: 2112 DQCLPEYLRIPTYGCRFCD 2130
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
QC+ E G+C C PG TG +C+ C ++++G GCK C+C S+ CD + GQC
Sbjct: 2044 QCHQETGQCACMPGSTGLRCEACQHGYWNYGPFGCKKCDCEADLSLGTV--CDVITGQCH 2101
Query: 236 CKDNVEGAQC 245
C++ G +C
Sbjct: 2102 CQEGATGPRC 2111
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+CKP G+ CD C +Y E CK CEC+ G++ +T C + GQC CK N +GA
Sbjct: 437 CECKPQFIGENCDECASGYYSPPE--CKPCECSLNGTIDDT--CLPLNGQCPCKTNYDGA 492
Query: 244 QCRS 247
C+S
Sbjct: 493 FCQS 496
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 26/195 (13%)
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE----AGCKSCECNPAGSVKNTPNCDSV 121
+ +S CQC P TG C +C +Y C CECN ++ +CD+
Sbjct: 1784 SFTASSVELCQCPPPYTGPSCQQCASGYYRVSSGRYLGACVPCECN-----GHSGSCDAD 1838
Query: 122 KGQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
G C Q + G H EL R+ F + + C + +L+ Q +
Sbjct: 1839 TGICYDCQHETYGD-HCEL---CREGFYGNATTASPYSCLPCACPHPSASNNFALSCQVS 1894
Query: 180 SEG---RCQCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVK 231
G C CKPG + ++C+RCDV + FGE C+ C+CN + +C +
Sbjct: 1895 ETGILESCTCKPGYSSERCERCDVGY--FGEPLRLGGSCEECDCNENNDLSLEGSCHPIS 1952
Query: 232 GQCE-CKDNVEGAQC 245
G C+ C +N +G C
Sbjct: 1953 GDCDLCLNNTDGRHC 1967
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 90/231 (38%), Gaps = 54/231 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CN + F KE +GG CL C+ + G C++C +Y C C C
Sbjct: 1407 CDCNSQGSTSFSCKE------YGGQCL-CRPNVIGRRCDRCAPGHYSFPE---CIKCRC- 1455
Query: 61 PIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTP 116
P L C+ G+C C P V G +CDRC Y FG GC+ C C+P GS
Sbjct: 1456 PDSHL---CDEHSGQCYCPPHVEGKQCDRC--VPYAFGYDPLIGCQLCGCHPNGSEGGQL 1510
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH------ 170
CD GQC + V +RK +C Y H
Sbjct: 1511 QCDPNNGQC-----------LCKANVGARK-----------CDKCLPGFYGFSHCYECAC 1548
Query: 171 --GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
G+ C+ + C+CK V GD CD C + +D GC C C
Sbjct: 1549 ETKGTTEEICDETTALCKCKKNVIGDSCDACRPSTFDLRATNPDGCSECFC 1599
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPG 80
G C C+ G CE+C D +Y+ + C C C+ G+L + C+ G+C+C+P
Sbjct: 768 GQCF-CKRHVAGRRCERCADGFYELESYSQLGCHPCECDIGGALGVGCDMHTGQCRCRPR 826
Query: 81 VTGDKCDRCDVNHY 94
+TG CDR NHY
Sbjct: 827 ITGRACDRPIENHY 840
>gi|358413690|ref|XP_003582633.1| PREDICTED: multiple epidermal growth factor-like domains protein
9-like [Bos taurus]
Length = 777
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G CE C + +Y C C+CNP G+L+ C+S G+CQCK GVTG CD
Sbjct: 400 ECQPGYQGLRCETCTEGFYLNGTSGRCLPCDCNPRGALSTVCSSSGKCQCKVGVTGSSCD 459
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH----TELRVQ 143
RC +YDF E GC C+CN + +CD++ G C + Q +S G H TE Q
Sbjct: 460 RCQDGYYDFNENGCLPCQCN-----NRSASCDALTGACFNCQDNSEGD-HCEECTEGFYQ 513
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNH 202
S P G++ + RC G + SE C QCK G TG C+ C+ +
Sbjct: 514 S-----PDGSK--ECLRCPCSAV-TSTGSCIIKLGESEPECVQCKDGYTGQNCNDCNHGY 565
Query: 203 YDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQC 245
Y+ ++ C C+C+ TP C+ G+C C N G C
Sbjct: 566 YN-SDSICVECQCHGHVDPVKTPRVCEPESGECISCLHNTTGFWC 609
>gi|444519322|gb|ELV12742.1| Laminin subunit alpha-1 [Tupaia chinensis]
Length = 2416
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 106/237 (44%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GSL+ C+ E G C C+
Sbjct: 463 GECLKCIGNTDGAHCERCADGFY---GDAVTAKNCRACQCHEQGSLSAVCHHETGLCDCR 519
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC C CN AGS+ + +C +GQC
Sbjct: 520 PHVTGQQCDQCLHGYYGLDRGLGCLPCNCNTAGSMSD--DCTD-EGQCRCVP-------- 568
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC Y GG C+ E G C C P
Sbjct: 569 -----------GVAGKRC---DRCSHGFYGYKDGGCTPCDCPHTQNTCDPESGECTCPPH 614
Query: 190 VTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ E GC++C C+ GSV +P C + G C CK G +C
Sbjct: 615 TQGPKCEECEEEHWGHHLELGCQACNCSRVGSV--SPQCHVLTGDCHCKSEFGGRRC 669
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 107/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C YY C CNCN GS++ C EG+C+C PGV G +CD
Sbjct: 517 DCRPHVTGQQCDQCLHGYYGLDRGLGCLPCNCNTAGSMSDDCTDEGQCRCVPGVAGKRCD 576
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-----------ESAQLSSRGRV 136
RC Y + + GC C+C +NT CD G+C E + G
Sbjct: 577 RCSHGFYGYKDGGCTPCDCP---HTQNT--CDPESGECTCPPHTQGPKCEECEEEHWGH- 630
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
H EL Q+ C R GS++ QC+ G C CK G +C
Sbjct: 631 HLELGCQACN--------------CSR-------VGSVSPQCHVLTGDCHCKSEFGGRRC 669
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE---------CKDNVEGAQC 245
D+C + H DF + C C+C+ G++ +T CD +G CE CK+NV G QC
Sbjct: 670 DQCSLGHRDFPD--CVPCDCDLRGTLADT--CDLDRGLCECAEETGTCSCKENVFGLQC 724
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 73/191 (38%), Gaps = 58/191 (30%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C GP CE+C + ++ + C ACNC+ +GS++ QC+ G C CK G +CD
Sbjct: 611 CPPHTQGPKCEECEEEHWGHHLELGCQACNCSRVGSVSPQCHVLTGDCHCKSEFGGRRCD 670
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C + H DF + C C+C+ G++ +T CD +G CE
Sbjct: 671 QCSLGHRDFPD--CVPCDCDLRGTLADT--CDLDRGLCE--------------------- 705
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-- 205
C +T G C CK V G +C C +
Sbjct: 706 -------------CAEET----------------GTCSCKENVFGLQCSECRAGTFALQA 736
Query: 206 -GEAGCKSCEC 215
GC C C
Sbjct: 737 DNPLGCSPCFC 747
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G++CDRC + H G C C+C+ AGSV N P + C CK NVE
Sbjct: 49 GQCPCKEGYAGERCDRCQLGHK--GYPNCVRCDCSLAGSVNNDPCTEP----CLCKKNVE 102
Query: 242 GAQC 245
G C
Sbjct: 103 GKNC 106
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCN 60
N FS C + + H C C +G CE+C Y+ Q G + C C+C+
Sbjct: 926 NSFSPTCVLEGD------HDFRCDACLLGYEGQYCERCSSGYHGNPQTLGGS-CQKCDCS 978
Query: 61 PIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
P GS++ C+ G+C C+PG TG +C+ C+ H E+ C SC
Sbjct: 979 PHGSVHNNCDRVSGQCVCRPGATGLRCEECEPRHI-LVESDCVSC 1022
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 165 TYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGS 220
+YP + L+ + + RC C G G C+RC ++ + C+ C+C+P GS
Sbjct: 923 SYPNSFSPTCVLEGDHDFRCDACLLGYEGQYCERCSSGYHGNPQTLGGSCQKCDCSPHGS 982
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
V N NCD V GQC C+ G +C
Sbjct: 983 VHN--NCDRVSGQCVCRPGATGLRC 1005
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
G+C CK G G++CDRC + H G C C+C+ AGSV N P
Sbjct: 49 GQCPCKEGYAGERCDRCQLGHK--GYPNCVRCDCSLAGSVNNDP 90
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNC--NPIGSLNLQCNSEG----RC-QCK 78
+C + G +C+ C YY K N C+ C C + S + C EG RC C
Sbjct: 887 NCNDNTAGDHCDVCAPGYYGKVTGSANDCSLCTCPHSYPNSFSPTCVLEGDHDFRCDACL 946
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
G G C+RC ++ + C+ C+C+P GSV N NCD V GQC
Sbjct: 947 LGYEGQYCERCSSGYHGNPQTLGGSCQKCDCSPHGSVHN--NCDRVSGQC 994
>gi|348568097|ref|XP_003469835.1| PREDICTED: laminin subunit beta-1-like [Cavia porcellus]
Length = 1790
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 107/231 (46%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD ++ TG+ GG C DCQ + G +CE+C+ YYQ N
Sbjct: 339 CNCNEHSTSCHFDMAVFLATGNVSGGVCDDCQHNTMGRSCEQCKPFYYQHPERDVRDPNV 398
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 399 CERCTCDPAGSQNGGICDSYTDFSTGLIAGQCRCKLHVEGEHCDVCKEGFYDLNAEDPLG 458
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC C+P G++ CDS G C R+ + ++ D + W L
Sbjct: 459 CKSCACSPLGTIPGGNPCDSGTGSCYCK------------RLVTGQHCDQCLPQHWGLSN 506
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+L+ C+SE G+C C+P + G +C+ + +Y
Sbjct: 507 DLDGCRPCDCDV-----GGALDDSCSSESGQCSCRPHLIGRQCNEVESGYY 552
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--------GRC 75
G CL C +G +C+ CR YY + C C CN +G+ CNS G+C
Sbjct: 999 GRCLKCLYHTEGAHCQLCRSGYYGDAIQQDCRKCVCNSLGTEQQHCNSSDCQCDQATGQC 1058
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N + GC+ C CN S P+C+ GQC+ G
Sbjct: 1059 SCLPNVIGQNCDRCAPNTWQLASGTGCQPCGCNAEHSFG--PSCNEFTGQCQCMP-GFGG 1115
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E ++ F GN + R C D G QCN S G+C C GV G
Sbjct: 1116 RTCSE----CQELF--WGNPDVECRACDCDPR-----GIETPQCNRSTGQCICMEGVEGP 1164
Query: 194 KCDRC 198
+CD+C
Sbjct: 1165 RCDKC 1169
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 112/275 (40%), Gaps = 57/275 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL CQ G NCE+C YY
Sbjct: 871 CQCNGHADDC---------DSVTGQCLRCQDYTTGHNCERCLAGYYGDPVIGSGDHCRPC 921
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFG 97
SG F +C +P+ +L L C C+PG G +CD C + D G
Sbjct: 922 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCEPGYIGSRCDECAPGFFGNPSDIG 974
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-W 156
C+ C+C+ + CD G+C + G H +L R + G+ I
Sbjct: 975 -GSCQPCQCHHNIDTSDPQACDKETGRCLKCLYHTEG-AHCQL---CRSGY--YGDAIQQ 1027
Query: 157 DLRRCKRDTYPLG----HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGC 210
D R+C ++ LG H S + QC+ + G+C C P V G CDRC N + GC
Sbjct: 1028 DCRKCVCNS--LGTEQQHCNSSDCQCDQATGQCSCLPNVIGQNCDRCAPNTWQLASGTGC 1085
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C CN S P+C+ GQC+C G C
Sbjct: 1086 QPCGCNAEHSFG--PSCNEFTGQCQCMPGFGGRTC 1118
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR + S AC C+P GSL+ C+ G +CQC+P V G CDRC
Sbjct: 754 PMTDVCRGIIFSISALLHQAGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCDRCAPG 813
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK C+C+ GSV + CD+ GQC
Sbjct: 814 TFGFGPSGCKPCDCHLQGSV--SAFCDANTGQC 844
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 110/261 (42%), Gaps = 55/261 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE C D Y+ + N C CNCN + L
Sbjct: 300 GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSTSCHFDMAVFLAT 358
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDS 120
S G C C+ G C++C +Y E C+ C C+PAGS +N CDS
Sbjct: 359 GNVSGGVCDDCQHNTMGRSCEQCKPFYYQHPERDVRDPNVCERCTCDPAGS-QNGGICDS 417
Query: 121 --------VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR-----CKR-DTY 166
+ GQC R ++H E ++ D +DL CK
Sbjct: 418 YTDFSTGLIAGQC-------RCKLHVE-----GEHCDVCKEGFYDLNAEDPLGCKSCACS 465
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNT 224
PLG N + G C CK VTG CD+C H+ GC+ C+C+ G++ ++
Sbjct: 466 PLGTIPGGNPCDSGTGSCYCKRLVTGQHCDQCLPQHWGLSNDLDGCRPCDCDVGGALDDS 525
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
C S GQC C+ ++ G QC
Sbjct: 526 --CSSESGQCSCRPHLIGRQC 544
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 103/238 (43%), Gaps = 30/238 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C C+C+ GS++ C++ G+C C GV
Sbjct: 793 GGQC-QCRPNVVGRTCDRCAPGTF-GFGPSGCKPCDCHLQGSVSAFCDANTGQCPCFQGV 850
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CDSV GQC Q + G H R
Sbjct: 851 YTRQCDRCLPGYWGF--PSCQPCQCN-----GHADDCDSVTGQCLRCQDYTTG--HNCER 901
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C+PG G
Sbjct: 902 CLAGYYGDPVIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQLA----CVCEPGYIGS 957
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + D G C+ C+C+ + CD G+C +C + EGA C+
Sbjct: 958 RCDECAPGFFGNPSDIG-GSCQPCQCHHNIDTSDPQACDKETGRCLKCLYHTEGAHCQ 1014
>gi|291408462|ref|XP_002720552.1| PREDICTED: Multiple epidermal growth factor-like domains protein
9-like [Oryctolagus cuniculus]
Length = 587
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 119/249 (47%), Gaps = 20/249 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ + D L N+T G C CQ G CE C++ +Y C C C+
Sbjct: 189 CNCSRIGS---LDVNLCNQTT--GQC-ACQRGYQGLQCESCQEGFYLNHTSGLCLPCRCS 242
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P G+L CNS G CQCK GVTG CD+C +Y+F + GC C+CN + +C++
Sbjct: 243 PHGALGTLCNSSGNCQCKVGVTGSTCDQCQDGYYNFTKNGCLPCQCN-----NRSVSCNA 297
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+ G C + Q +S+G H E + + F N + C ++ L S
Sbjct: 298 LTGVCLNCQGNSQGD-HCE---ECKGGFYQNPNATEECLLCPCSAVTSTGICTIKLG-ES 352
Query: 181 EGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECK 237
E +C QCK G TG C++C+ +Y+ ++ C C+CN TP C+S G+C C
Sbjct: 353 EPKCSQCKEGYTGQNCNQCENGYYN-SDSICVKCQCNGHVDPSKTPKMCNSKSGECINCL 411
Query: 238 DNVEGAQCR 246
N G C
Sbjct: 412 HNTTGFWCE 420
>gi|27545303|ref|NP_775383.1| laminin subunit beta-4 precursor [Danio rerio]
gi|82243519|sp|Q8JHV6.1|LAMB4_DANRE RecName: Full=Laminin subunit beta-4; Flags: Precursor
gi|21538981|gb|AAM61768.1|AF468050_1 laminin beta 4 [Danio rerio]
Length = 1827
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 105/209 (50%), Gaps = 23/209 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ---KSGDN--F 53
CNC+ S +C F+ Y TG GG C DC+ +R GP CE C YYQ +S D+
Sbjct: 334 CNCHSHSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQDPQRSVDDPYA 393
Query: 54 CTACNCNPIGSLN--LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNP 108
C C+C+ GS++ L G+C CK + G++CDRC V Y F +GC+ C CN
Sbjct: 394 CIPCDCDLDGSVDRGLCDPVNGQCVCKQNIEGERCDRCKVGFYGFSRDDPSGCQLCRCNF 453
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G+++ CD G+C + + Q + GN ++ C D
Sbjct: 454 LGTIQVGNPCDPTTGRCICEHFAYGSQCD-----QCLPGYWGLGNTVYGCIPCDCDI--- 505
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCD 196
GG+L +C+S +G+C+C+P + G KC+
Sbjct: 506 --GGALKTECSSVDGQCKCRPNMVGQKCN 532
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + G C+ C Y G N C+ C+C+ GS C+ + G+C C+ G+
Sbjct: 869 GGQC-QCKPNVIGRCCDSCAPLTY-GLGPNGCSPCDCDRSGSTTELCDQTTGQCSCRDGI 926
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
TG +C+RC +Y F C+ C+CN + CD + G C + S GR + E R
Sbjct: 927 TGLQCNRCYPGYYGF--PLCRRCQCNRLADI-----CDPITGDCLDCREHSAGR-NCE-R 977
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR-----CQCKPGVTGDKCD 196
+ DP + + C G G CN + R C+C PG TG +CD
Sbjct: 978 CEEGYVGDPVSGQPCEPCLCPDLN---GSGRFFAFSCNKDPRSGAPYCECLPGHTGPQCD 1034
Query: 197 RCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCRS 247
C Y D G CK C CN ++ CD V G+C C N EG +C+S
Sbjct: 1035 SCSPGFYGDLRLPGGRCKECCCNNNIDPRDGDACDPVTGECLRCLHNTEGPRCQS 1089
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 25/190 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS---------EGR 74
G CL C + +GP C+ C+ YY + C C+C+ G+ + +C + G+
Sbjct: 1073 GECLRCLHNTEGPRCQSCKRGYYGNALAQDCKECSCDRRGTDDSKCPAGSPCFCDQDTGQ 1132
Query: 75 CQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C+PGV G C+ CD +++ G+ GC+ C CN ++ CD + GQC Q
Sbjct: 1133 CPCRPGVQGALCNECDDGYWNMDGDYGCQPCNCNREHALNYI--CDKITGQC-LCQPEYG 1189
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR+ E +F GN C + G+++ C++ G C CKPGVTG
Sbjct: 1190 GRICDEC---GPNHF---GNPDLQCMFCDCNL-----EGTVHPACDAYTGECLCKPGVTG 1238
Query: 193 DKCDRCDVNH 202
CD C H
Sbjct: 1239 PFCDECAPGH 1248
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 121/279 (43%), Gaps = 48/279 (17%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQ-------K 48
C CNG +++C + + G G C+ CQ + G NCE+C+D Y+ K
Sbjct: 267 CFCNGHASQCIPVDGARGDTFTEPGMVHGRCV-CQHNTAGYNCERCQDFYHDAPWRPGGK 325
Query: 49 SGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVN------------HYD 95
+ + C CNC+ S + +C+ E R GV+G CD C N +Y
Sbjct: 326 ADSDVCKRCNCH---SHSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQ 382
Query: 96 FGE------AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT-ELRVQSRKNF 148
+ C C+C+ GSV CD V GQC Q R ++
Sbjct: 383 DPQRSVDDPYACIPCDCDLDGSVDRG-LCDPVNGQCVCKQNIEGERCDRCKVGFYGFSRD 441
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
DP+G + L RC LG N + GRC C+ G +CD+C ++ G
Sbjct: 442 DPSGCQ---LCRCNF----LGTIQVGNPCDPTTGRCICEHFAYGSQCDQCLPGYWGLGNT 494
Query: 209 --GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C+C+ G++K C SV GQC+C+ N+ G +C
Sbjct: 495 VYGCIPCDCDIGGALKT--ECSSVDGQCKCRPNMVGQKC 531
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N +CNC+ +G+ C+ G +CQCKP V G CD C Y G GC C+C+ +G
Sbjct: 848 NGAVSCNCHHVGAYGSSCSKFGGQCQCKPNVIGRCCDSCAPLTYGLGPNGCSPCDCDRSG 907
Query: 111 SVKNTPNCDSVKGQC 125
S T CD GQC
Sbjct: 908 S--TTELCDQTTGQC 920
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
+LN C+ G+C C+P G CD C NH+ + C C+CN G+V P CD+
Sbjct: 1170 ALNYICDKITGQCLCQPEYGGRICDECGPNHFGNPDLQCMFCDCNLEGTVH--PACDAYT 1227
Query: 232 GQCECKDNVEGAQC 245
G+C CK V G C
Sbjct: 1228 GECLCKPGVTGPFC 1241
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 86/237 (36%), Gaps = 68/237 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGS----LNLQCNSEGR---- 74
G CLDC+ G NCE+C + Y C C C + CN + R
Sbjct: 961 GDCLDCREHSAGRNCERCEEGYVGDPVSGQPCEPCLCPDLNGSGRFFAFSCNKDPRSGAP 1020
Query: 75 -CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C+C PG TG +CD C Y D G CK C CN ++ CD V G+C
Sbjct: 1021 YCECLPGHTGPQCDSCSPGFYGDLRLPGGRCKECCCNNNIDPRDGDACDPVTGECLRCLH 1080
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC-KPG 189
++ G R QS CKR Y G +L C C C + G
Sbjct: 1081 NTEGP-----RCQS----------------CKRGYY----GNALAQDCK---ECSCDRRG 1112
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP-NCDSVKGQCECKDNVEGAQC 245
KC PAGS P CD GQC C+ V+GA C
Sbjct: 1113 TDDSKC---------------------PAGS----PCFCDQDTGQCPCRPGVQGALC 1144
>gi|296479337|tpg|DAA21452.1| TPA: Usher syndrome 2A (autosomal recessive, mild) [Bos taurus]
Length = 5252
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--- 52
C CN S C ++ + + G GG C DC+ + G NCE C+D ++++ G +
Sbjct: 575 CECNSHSRSCHYNISVDPFPFEHYRGGGGVCDDCEHNTAGKNCELCKDYFFRQVGADPSA 634
Query: 53 --FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C C+C+ +G+ N C+ G +C CK V+G +C++C Y+ E GC C
Sbjct: 635 IDVCRPCDCDKVGTRNSSFLCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQEWDPDGCSPC 694
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + H + ++F+ G C+
Sbjct: 695 NCNTSGTVDGDITCHPNSGQCKCKANVIGLRCDHCNFGFKFLQSFNDDG-----CEPCQC 749
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS+N CN G+C+CK G +CD C + Y GCK+C+C+ AGS
Sbjct: 750 NLH-----GSVNRLCNPLSGQCECKKEAKGLQCDTCREHFYGLDATGCKACDCDVAGSRP 804
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK NV G +C
Sbjct: 805 GT-VCDAWTGQCVCKPNVGGRRC 826
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNY-YQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C + Y YQ +F C CNC+ G++N L C+ S G+C CK
Sbjct: 813 GQCV-CKPNVGGRRCSECVEGYFYQPQNRSFLCLPCNCDRTGTVNGSLLCDKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG C++C+ + Y GC+ CEC+P G++ T CD + GQC
Sbjct: 872 LGVTGLHCNQCESHRYHLTVGSFQGCQMCECDPLGTLPGT-ICDPLSGQCPC-------- 922
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
+ +R+ RRC + + + G G++N CNS
Sbjct: 923 ------LPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G CD C ++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASIAGQSCDYCKDLYFGFDSLTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KRFVTGSKC 1032
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G +C +C + Y + +F C C C+P+G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLHCNQCESHRYHLTVGSFQGCQMCECDPLGTLPGTICDPLSGQCPCLPNRQGR 929
Query: 85 KCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y G A GC C C+ G+V + C+S+ GQC S G
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHI--CNSLTGQCVCQDASIAG-------- 979
Query: 143 QS-------RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDK 194
QS FD R C+ L G+LN C+ G+C CK VTG K
Sbjct: 980 QSCDYCKDLYFGFDSLTGR------CQPCNCHLS--GALNETCHLVTGQCFCKRFVTGSK 1031
Query: 195 CDRC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
CD C + +H D NP G K +GQ + +
Sbjct: 1032 CDTCVPNASHLDIS---------NPLGCSKTPSQQPPPRGQVQSSSAI 1070
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
G C+ G +C+ C+D Y+ S C CNC+ G+LN C+ G+C CK V
Sbjct: 968 GQCVCQDASIAGQSCDYCKDLYFGFDSLTGRCQPCNCHLSGALNETCHLVTGQCFCKRFV 1027
Query: 82 TGDKCDRC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
TG KCD C + +H D NP G K +GQ +S+
Sbjct: 1028 TGSKCDTCVPNASHLDIS---------NPLGCSKTPSQQPPPRGQVQSS 1067
>gi|300794294|ref|NP_001178354.1| usherin [Bos taurus]
Length = 5204
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--- 52
C CN S C ++ + + G GG C DC+ + G NCE C+D ++++ G +
Sbjct: 575 CECNSHSRSCHYNISVDPFPFEHYRGGGGVCDDCEHNTAGKNCELCKDYFFRQVGADPSA 634
Query: 53 --FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C C+C+ +G+ N C+ G +C CK V+G +C++C Y+ E GC C
Sbjct: 635 IDVCRPCDCDKVGTRNSSFLCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQEWDPDGCSPC 694
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + H + ++F+ G C+
Sbjct: 695 NCNTSGTVDGDITCHPNSGQCKCKANVIGLRCDHCNFGFKFLQSFNDDG-----CEPCQC 749
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS+N CN G+C+CK G +CD C + Y GCK+C+C+ AGS
Sbjct: 750 NLH-----GSVNRLCNPLSGQCECKKEAKGLQCDTCREHFYGLDATGCKACDCDVAGSRP 804
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK NV G +C
Sbjct: 805 GT-VCDAWTGQCVCKPNVGGRRC 826
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNY-YQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C + Y YQ +F C CNC+ G++N L C+ S G+C CK
Sbjct: 813 GQCV-CKPNVGGRRCSECVEGYFYQPQNRSFLCLPCNCDRTGTVNGSLLCDKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG C++C+ + Y GC+ CEC+P G++ T CD + GQC
Sbjct: 872 LGVTGLHCNQCESHRYHLTVGSFQGCQMCECDPLGTLPGT-ICDPLSGQCPC-------- 922
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
+ +R+ RRC + + + G G++N CNS
Sbjct: 923 ------LPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G CD C ++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASIAGQSCDYCKDLYFGFDSLTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KRFVTGSKC 1032
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G +C +C + Y + +F C C C+P+G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLHCNQCESHRYHLTVGSFQGCQMCECDPLGTLPGTICDPLSGQCPCLPNRQGR 929
Query: 85 KCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y G A GC C C+ G+V + C+S+ GQC S G
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHI--CNSLTGQCVCQDASIAG-------- 979
Query: 143 QS-------RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDK 194
QS FD R C+ L G+LN C+ G+C CK VTG K
Sbjct: 980 QSCDYCKDLYFGFDSLTGR------CQPCNCHLS--GALNETCHLVTGQCFCKRFVTGSK 1031
Query: 195 CDRC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
CD C + +H D NP G K +GQ + +
Sbjct: 1032 CDTCVPNASHLDIS---------NPLGCSKTPSQQPPPRGQVQSSSAI 1070
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
G C+ G +C+ C+D Y+ S C CNC+ G+LN C+ G+C CK V
Sbjct: 968 GQCVCQDASIAGQSCDYCKDLYFGFDSLTGRCQPCNCHLSGALNETCHLVTGQCFCKRFV 1027
Query: 82 TGDKCDRC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
TG KCD C + +H D NP G K +GQ +S+
Sbjct: 1028 TGSKCDTCVPNASHLDIS---------NPLGCSKTPSQQPPPRGQVQSS 1067
>gi|354481945|ref|XP_003503161.1| PREDICTED: laminin subunit alpha-5 isoform 2 [Cricetulus griseus]
Length = 3742
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ DGP+C++C Y+ G C AC C+P GSL+ C G C+C+PG G C
Sbjct: 612 CRPGFDGPHCDRCLPGYH---GYPDCHACACDPQGSLDQLCGVGGSCRCRPGYAGTTCQE 668
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR----VQS 144
C + F C C C+ GS+ NCD GQC S R RV T LR V
Sbjct: 669 CSPGFHGF--PSCIPCHCSAHGSLHT--NCDPTTGQC-----SCRPRV-TGLRCDMCVPG 718
Query: 145 RKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
NF C+ + +P G + S+ C C+ V G CDRC ++
Sbjct: 719 AYNFP----------YCEAGSCHPAGLAPANPALPESQASCTCRAHVEGPSCDRCKPGYW 768
Query: 204 DFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ GC C C+P G++ C GQC CK +V G C +
Sbjct: 769 GLSPSNPEGCTRCSCDPRGTLGGVTECQLGNGQCFCKAHVCGQACAA 815
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 108/263 (41%), Gaps = 42/263 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G C+ CQ + +G CE+CR + + ++ C +C
Sbjct: 1865 CQCHGHSDRCLPGS---------GTCVSCQHNTEGDQCERCRVGFVRTDPNDPAAPCVSC 1915
Query: 58 NCNPIGSLN-------LQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
C P+ + + N +C C+PG G C+RC + + C+ C+C+
Sbjct: 1916 PC-PLAVPSNNFADGCVLRNGRTQCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDCS 1974
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DT 165
G +CD + G C + G N GN C R D
Sbjct: 1975 GNGDPNMIFSDCDPLTGACRGCLRHTTGPHCESCAPGFYGNALLPGN-------CTRCDC 2027
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
P G C+ + GRC CK GVTG +CDRC H+ F + GC+ C C PA
Sbjct: 2028 SPCG-----TETCDPQSGRCLCKAGVTGQRCDRCLEGHFGFEQCQGCRPCTCGPAAKGSK 2082
Query: 224 TPNCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2083 ---CHPQSGQCHCQPGTTGPQCR 2102
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP+CE C +Y + CT C+C
Sbjct: 1973 CSGNGDPNMIFSDCDPLT-----GACRGCLRHTTGPHCESCAPGFYGNALLPGNCTRCDC 2027
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNC 118
+P G+ S GRC CK GVTG +CDRC H+ F + GC+ C C PA C
Sbjct: 2028 SPCGTETCDPQS-GRCLCKAGVTGQRCDRCLEGHFGFEQCQGCRPCTCGPAAKGSK---C 2083
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCKRDTYPLGHGGSLNL 176
GQC Q + G Q R+ W L + C+R P GH
Sbjct: 2084 HPQSGQCH-CQPGTTGP-------QCRE----CAPGYWGLPEKGCRRCQCPQGH------ 2125
Query: 177 QCNSE-GRCQCKPGVTGDKCDRC 198
C+ GRC C PG++G++CD C
Sbjct: 2126 -CDPHTGRCTCPPGLSGERCDTC 2147
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 51/211 (24%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G+++ C G +C C+ V G C RC ++ F C+ C+C
Sbjct: 1437 NNGALPCACHEVGAISPTCEPFGGQCPCRGHVIGRDCSRCATGYWGFPH--CRPCDCG-- 1492
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--- 166
T CD + GQC + + P D C+ T+
Sbjct: 1493 -----TRLCDELTGQC----------------ICPPRTVPP------DCLVCQPQTFGCH 1525
Query: 167 PL-----------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
PL G + C+ + G+C+C+P V G +CD C Y G C+ C+
Sbjct: 1526 PLVGCEECNCSGPGVQELADPTCDMDSGQCKCRPNVAGRRCDTCAPGFY--GYPSCRPCD 1583
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ AG+V + CD GQC CK+NV+G++C
Sbjct: 1584 CHEAGTVASV--CDPFTGQCHCKENVQGSRC 1612
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 94/236 (39%), Gaps = 42/236 (17%)
Query: 23 GGHCLDC-QGDRDGPNCEKC--RDNYYQKSGDNFCTACNCNPIGSLNLQCNSE---GRCQ 76
G HC C +G P+C D Q S C+CN G+ C + GRC
Sbjct: 462 GEHCTACAEGYTGFPHCYPVPHNDTREQVSPAGQIVNCDCNAAGTQGNACRKDPRLGRCV 521
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
CKP G C+ C Y C+SC+C+ G CD GQC
Sbjct: 522 CKPNFQGSHCELCAPGFYG---PNCQSCQCSSPGVASGL--CDPESGQCTC--------- 567
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL------GHGGSLNLQCNSEGRCQCKPGV 190
R F+ G++ D +PL G+L C+ GRCQC+PG
Sbjct: 568 --------RTGFE--GDKC-DHCALGYFHFPLCQLCGCSPAGTLPEGCDEAGRCQCRPGF 616
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G CDRC ++ + + C +C C+P GS+ C V G C C+ G C+
Sbjct: 617 DGPHCDRCLPGYHGYPD--CHACACDPQGSLDQL--C-GVGGSCRCRPGYAGTTCQ 667
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG TG +C C ++ E GC+ C+C P G +CD G+C C +
Sbjct: 2088 GQCHCQPGTTGPQCRECAPGYWGLPEKGCRRCQC-PQG------HCDPHTGRCTCPPGLS 2140
Query: 242 GAQC 245
G +C
Sbjct: 2141 GERC 2144
>gi|440903908|gb|ELR54498.1| Netrin-4 [Bos grunniens mutus]
Length = 628
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 37/216 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y S +
Sbjct: 332 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C +C+C+P+GS L +S G C CKPGV G C+RC V ++ FG+ GC+ C+C
Sbjct: 392 CKSCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
AGS CD G C LSS + V + WD + ++
Sbjct: 452 --AGS------CDPHTGDC----LSSSTDIDWYHEVPDFHSMHNKSEPTWDWKD-EQGFS 498
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
L H G+C+CK V G+ C + +
Sbjct: 499 ALRH----------SGKCECKEQVLGNSKAFCGMKY 524
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 20/91 (21%)
Query: 156 WDLRR-------CKR-DTYPLGHG----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
WDLRR CK +P+G S+ S G C CKPGV G C+RC V ++
Sbjct: 380 WDLRRPFSAPDACKSCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYW 439
Query: 204 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
FG+ GC+ C+C AGS CD G C
Sbjct: 440 GFGDYGCRPCDC--AGS------CDPHTGDC 462
>gi|354481943|ref|XP_003503160.1| PREDICTED: laminin subunit alpha-5 isoform 1 [Cricetulus griseus]
gi|344254948|gb|EGW11052.1| Laminin subunit alpha-5 [Cricetulus griseus]
Length = 3735
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ DGP+C++C Y+ G C AC C+P GSL+ C G C+C+PG G C
Sbjct: 612 CRPGFDGPHCDRCLPGYH---GYPDCHACACDPQGSLDQLCGVGGSCRCRPGYAGTTCQE 668
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR----VQS 144
C + F C C C+ GS+ NCD GQC S R RV T LR V
Sbjct: 669 CSPGFHGF--PSCIPCHCSAHGSLHT--NCDPTTGQC-----SCRPRV-TGLRCDMCVPG 718
Query: 145 RKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
NF C+ + +P G + S+ C C+ V G CDRC ++
Sbjct: 719 AYNFP----------YCEAGSCHPAGLAPANPALPESQASCTCRAHVEGPSCDRCKPGYW 768
Query: 204 DFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ GC C C+P G++ C GQC CK +V G C +
Sbjct: 769 GLSPSNPEGCTRCSCDPRGTLGGVTECQLGNGQCFCKAHVCGQACAA 815
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 108/263 (41%), Gaps = 42/263 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G C+ CQ + +G CE+CR + + ++ C +C
Sbjct: 1865 CQCHGHSDRCLPGS---------GTCVSCQHNTEGDQCERCRVGFVRTDPNDPAAPCVSC 1915
Query: 58 NCNPIGSLN-------LQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
C P+ + + N +C C+PG G C+RC + + C+ C+C+
Sbjct: 1916 PC-PLAVPSNNFADGCVLRNGRTQCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDCS 1974
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DT 165
G +CD + G C + G N GN C R D
Sbjct: 1975 GNGDPNMIFSDCDPLTGACRGCLRHTTGPHCESCAPGFYGNALLPGN-------CTRCDC 2027
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
P G C+ + GRC CK GVTG +CDRC H+ F + GC+ C C PA
Sbjct: 2028 SPCG-----TETCDPQSGRCLCKAGVTGQRCDRCLEGHFGFEQCQGCRPCTCGPAAKGSK 2082
Query: 224 TPNCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2083 ---CHPQSGQCHCQPGTTGPQCR 2102
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP+CE C +Y + CT C+C
Sbjct: 1973 CSGNGDPNMIFSDCDPLT-----GACRGCLRHTTGPHCESCAPGFYGNALLPGNCTRCDC 2027
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNC 118
+P G+ S GRC CK GVTG +CDRC H+ F + GC+ C C PA C
Sbjct: 2028 SPCGTETCDPQS-GRCLCKAGVTGQRCDRCLEGHFGFEQCQGCRPCTCGPAAKGSK---C 2083
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCKRDTYPLGHGGSLNL 176
GQC Q + G Q R+ W L + C+R P GH
Sbjct: 2084 HPQSGQCH-CQPGTTGP-------QCRE----CAPGYWGLPEKGCRRCQCPQGH------ 2125
Query: 177 QCNSE-GRCQCKPGVTGDKCDRC 198
C+ GRC C PG++G++CD C
Sbjct: 2126 -CDPHTGRCTCPPGLSGERCDTC 2147
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 51/211 (24%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G+++ C G +C C+ V G C RC ++ F C+ C+C
Sbjct: 1437 NNGALPCACHEVGAISPTCEPFGGQCPCRGHVIGRDCSRCATGYWGFPH--CRPCDCG-- 1492
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--- 166
T CD + GQC + + P D C+ T+
Sbjct: 1493 -----TRLCDELTGQC----------------ICPPRTVPP------DCLVCQPQTFGCH 1525
Query: 167 PL-----------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
PL G + C+ + G+C+C+P V G +CD C Y G C+ C+
Sbjct: 1526 PLVGCEECNCSGPGVQELADPTCDMDSGQCKCRPNVAGRRCDTCAPGFY--GYPSCRPCD 1583
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ AG+V + CD GQC CK+NV+G++C
Sbjct: 1584 CHEAGTVASV--CDPFTGQCHCKENVQGSRC 1612
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 94/236 (39%), Gaps = 42/236 (17%)
Query: 23 GGHCLDC-QGDRDGPNCEKC--RDNYYQKSGDNFCTACNCNPIGSLNLQCNSE---GRCQ 76
G HC C +G P+C D Q S C+CN G+ C + GRC
Sbjct: 462 GEHCTACAEGYTGFPHCYPVPHNDTREQVSPAGQIVNCDCNAAGTQGNACRKDPRLGRCV 521
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
CKP G C+ C Y C+SC+C+ G CD GQC
Sbjct: 522 CKPNFQGSHCELCAPGFYG---PNCQSCQCSSPGVASGL--CDPESGQCTC--------- 567
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL------GHGGSLNLQCNSEGRCQCKPGV 190
R F+ G++ D +PL G+L C+ GRCQC+PG
Sbjct: 568 --------RTGFE--GDKC-DHCALGYFHFPLCQLCGCSPAGTLPEGCDEAGRCQCRPGF 616
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G CDRC ++ + + C +C C+P GS+ C V G C C+ G C+
Sbjct: 617 DGPHCDRCLPGYHGYPD--CHACACDPQGSLDQL--C-GVGGSCRCRPGYAGTTCQ 667
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG TG +C C ++ E GC+ C+C P G +CD G+C C +
Sbjct: 2088 GQCHCQPGTTGPQCRECAPGYWGLPEKGCRRCQC-PQG------HCDPHTGRCTCPPGLS 2140
Query: 242 GAQC 245
G +C
Sbjct: 2141 GERC 2144
>gi|403265300|ref|XP_003924882.1| PREDICTED: laminin subunit alpha-1 [Saimiri boliviensis boliviensis]
Length = 3080
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 106/237 (44%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D ++ GD C AC C+ GS + C+ E G C CK
Sbjct: 872 GECLKCLGNTDGAHCERCADGFF---GDAVTAKNCRACECHEKGSHSAMCHLETGLCDCK 928
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG KCD+C +Y GC+ C C+ AGSV + +C +GQC
Sbjct: 929 PNVTGQKCDQCLRGYYGLDSGHGCQPCNCSTAGSVSD--DCTD-EGQCHCIP-------- 977
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC R Y G C+ E G C C P
Sbjct: 978 -----------GVAGKRC---DRCARGFYTYQDGSCTPCDCPHTRNTCDPETGACVCPPH 1023
Query: 190 VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ + E GC++C C+ GS + CD V G C+CK G C
Sbjct: 1024 TQGGKCEECEDGHWGYDLEVGCQACNCSLVGSTHH--QCDMVTGHCQCKSKFGGRDC 1078
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 68/142 (47%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D K+ N G GG CL+C + G NCE C D YY+
Sbjct: 331 CNCHNKAKDCYYDENVAKQKKSLNTAGQFRGGGVCLNCLQNTMGINCETCIDGYYRPHKV 390
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C C+C+P+GSL+ C + G+C CK G G+KCD C V +
Sbjct: 391 SPYEDEPCRPCDCDPVGSLSSVCVKDDRHSDLHNGKWPGQCPCKEGYAGEKCDHCQVGYK 450
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
D+ C C CNP GS + P
Sbjct: 451 DY--PNCVPCGCNPVGSANDEP 470
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 100/235 (42%), Gaps = 44/235 (18%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ + G C++C YY + C CNC+ GS++ C EG+C C PGV G +CD
Sbjct: 926 DCKPNVTGQKCDQCLRGYYGLDSGHGCQPCNCSTAGSVSDDCTDEGQCHCIPGVAGKRCD 985
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y + + C C+C +NT CD G C + G+
Sbjct: 986 RCARGFYTYQDGSCTPCDCP---HTRNT--CDPETGACVCPPHTQGGKC----------- 1029
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG---------GSLNLQCNS-EGRCQCKPGVTGDKCDR 197
+ + W Y L G GS + QC+ G CQCK G CD+
Sbjct: 1030 -EECEDGHWG--------YDLEVGCQACNCSLVGSTHHQCDMVTGHCQCKSKFGGRDCDQ 1080
Query: 198 CDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
C + + F + C C+C+ G+ +T N C G C CK+NV G QC
Sbjct: 1081 CSLGYRGFPD--CVPCDCDLRGTSGDTCNLEQGLCSCAKETGACSCKENVFGPQC 1133
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 64/137 (46%), Gaps = 23/137 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACN 58
CNCN S+ C + G CL+C + G +CE C YY K N C C
Sbjct: 1407 CNCNNHSDTC---------DPNTGKCLNCSDNTAGDHCEVCASGYYGKVTGSANDCALCA 1457
Query: 59 C--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C +P S + C EG RC C PG G C+RC + +Y + C+ C+CNP
Sbjct: 1458 CPHSPPASFSPTCVLEGDHDFRCDACLPGYEGQLCERCSLGYYGNPQTPGGSCQKCDCNP 1517
Query: 109 AGSVKNTPNCDSVKGQC 125
GSV + +CD GQC
Sbjct: 1518 HGSVHD--DCDRTSGQC 1532
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCTACNCNPIGSLN-------LQCNS 71
G C+ C + G +CE+C +Y + GD C C C + N L
Sbjct: 759 GVCIACAHNTTGDHCERCLPGFYGEPSRGTPGD--CQPCACPLTMATNNFSPTCHLNDGD 816
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSC-ECNPAGSV--KNTPNCDSVKGQCES 127
E C QC PG +G C+RC +Y A KSC C+ +G+V + +CDSV G+C
Sbjct: 817 EVVCDQCAPGYSGAWCERCADGYYGNPTAPGKSCVPCDCSGNVDPEEAGHCDSVTGECLK 876
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ GS + C+ E G C C
Sbjct: 877 CLGNTDG-AHCE---RCADGFFGDAVTAKNCRACE-----CHEKGSHSAMCHLETGLCDC 927
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KP VTG KCD+C +Y GC+ C C+ AGSV + +C +GQC C V G +C
Sbjct: 928 KPNVTGQKCDQCLRGYYGLDSGHGCQPCNCSTAGSVSD--DCTD-EGQCHCIPGVAGKRC 984
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 96/245 (39%), Gaps = 60/245 (24%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEGRC-------- 75
C C G CE+C D YY + C C+C S N+ G C
Sbjct: 820 CDQCAPGYSGAWCERCADGYYGNPTAPGKSCVPCDC----SGNVDPEEAGHCDSVTGECL 875
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
+C G C+RC FG+A C++CEC+ GS ++ C G C+
Sbjct: 876 KCLGNTDGAHCERCADGF--FGDAVTAKNCRACECHEKGS--HSAMCHLETGLCDCKP-- 929
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL--GHG---------GSLNLQCNS 180
V +K +C R Y L GHG GS++ C
Sbjct: 930 ---------NVTGQK-----------CDQCLRGYYGLDSGHGCQPCNCSTAGSVSDDCTD 969
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
EG+C C PGV G +CDRC Y + + C C+C +NT CD G C C +
Sbjct: 970 EGQCHCIPGVAGKRCDRCARGFYTYQDGSCTPCDCP---HTRNT--CDPETGACVCPPHT 1024
Query: 241 EGAQC 245
+G +C
Sbjct: 1025 QGGKC 1029
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G+KCD C V + D+ C C CNP GS + P G C CK+NVE
Sbjct: 429 GQCPCKEGYAGEKCDHCQVGYKDY--PNCVPCGCNPVGSANDEP----CAGPCLCKENVE 482
Query: 242 GAQC 245
G C
Sbjct: 483 GKAC 486
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H C C +G CE+C YY Q G + C C+CNP GS++ C+ + G+C C
Sbjct: 1476 HDFRCDACLPGYEGQLCERCSLGYYGNPQTPGGS-CQKCDCNPHGSVHDDCDRTSGQCAC 1534
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ G +G +C+ C++ H E C SC+
Sbjct: 1535 RLGASGIRCEECELRHI-LVETACVSCD 1561
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 176 LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVK 231
L+ + + RC C PG G C+RC + +Y + C+ C+CNP GSV + +CD
Sbjct: 1472 LEGDHDFRCDACLPGYEGQLCERCSLGYYGNPQTPGGSCQKCDCNPHGSVHD--DCDRTS 1529
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 1530 GQCACRLGASGIRC 1543
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C+ C+ Y K N C C CNP+GS N + G C CK V G CDR
Sbjct: 433 CKEGYAGEKCDHCQVGY--KDYPN-CVPCGCNPVGSANDE-PCAGPCLCKENVEGKACDR 488
Query: 89 CDVNHYDFGEA---GCKSCEC 106
C Y+ E GC C C
Sbjct: 489 CKPGFYNLKEKNPQGCSECFC 509
>gi|443698151|gb|ELT98288.1| hypothetical protein CAPTEDRAFT_192888 [Capitella teleta]
Length = 3060
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 93/191 (48%), Gaps = 20/191 (10%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+ GSL C S G +C CKPGV G +C+ C + + GC+ C C +
Sbjct: 734 CNCDETGSLGGDCESYGGQCNCKPGVMGRRCNECQLEFHSLSATGCQPCNCQTTYKI--- 790
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
C++ GQC L+ +G+ E + N C D P+G S++
Sbjct: 791 --CNAETGQCTCPPLA-QGKQCEECTPNAWN-----WNATLGCEACNCD--PVG---SMS 837
Query: 176 LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
LQCN+E G C CKPGVTG KCD+C + F GC C+C+P GS + C QC
Sbjct: 838 LQCNAETGICSCKPGVTGAKCDQCFDDFTGFSNGGCSPCQCDPDGSTSSI--CSKTTAQC 895
Query: 235 ECKDNVEGAQC 245
CK V G +C
Sbjct: 896 PCKKYVGGLRC 906
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN +N+C + G CL C + G NCE+C +Y + + CT C+C+
Sbjct: 1275 CFCNNNTNQC---------SSVNGVCLGCDFNTTGNNCERCAPGFYGNATERTCTPCDCD 1325
Query: 61 PIGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNH--YDFGEAGCKSCECNPAGSVKNTPN 117
GSL+ C + +G+C+C+PGV G CD C N+ YD G+ GC C CN GSV N
Sbjct: 1326 LKGSLSTVCKHIDGQCECQPGVGGRVCDACIENYYGYDTGDIGCTDCACNEFGSVSLQCN 1385
Query: 118 -------CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
D V L + G NF + C +
Sbjct: 1386 QTGVCTCLDGVNSSSAKCDLCNLG------------NFGLPNQACEGEKSCACNA----- 1428
Query: 171 GGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
GSLNL E G+C CKPGV G +CD C ++ +GE+GC+ C
Sbjct: 1429 TGSLNLNLPCELVSGQCGCKPGVGGRQCDECQRMYHSYGESGCERC 1474
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH 93
G CE+C N + + C ACNC+P+GS++LQCN+E G C CKPGVTG KCD+C +
Sbjct: 806 GKQCEECTPNAWNWNATLGCEACNCDPVGSMSLQCNAETGICSCKPGVTGAKCDQCFDDF 865
Query: 94 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
F GC C+C+P GS + C QC
Sbjct: 866 TGFSNGGCSPCQCDPDGSTSSI--CSKTTAQC 895
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 103/233 (44%), Gaps = 26/233 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNS-EGRCQ-CK 78
C C G C+ C Y+ F C C CN + N QC+S G C C
Sbjct: 1239 AQCTFCAEGYMGRLCDTCAPFYFGNPKLEFIGTCQKCFCN--NNTN-QCSSVNGVCLGCD 1295
Query: 79 PGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
TG+ C+RC Y + E C C+C+ GS+ C + GQCE Q GRV
Sbjct: 1296 FNTTGNNCERCAPGFYGNATERTCTPCDCDLKGSLSTV--CKHIDGQCE-CQPGVGGRV- 1351
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGV--TGDKC 195
+ +++ +D D C + + GS++LQCN G C C GV + KC
Sbjct: 1352 CDACIENYYGYDTGDIGCTD---CACNEF-----GSVSLQCNQTGVCTCLDGVNSSSAKC 1403
Query: 196 DRCDVNHYDFGEAGC---KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D C++ ++ C KSC CN GS+ C+ V GQC CK V G QC
Sbjct: 1404 DLCNLGNFGLPNQACEGEKSCACNATGSLNLNLPCELVSGQCGCKPGVGGRQC 1456
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 100/256 (39%), Gaps = 78/256 (30%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ---- 47
CNC G ++ C++D + N GG C+DC+ + G NC C +Y+
Sbjct: 310 CNCYGHADSCYYDAGVAAQKTSLNALNVFEGGGVCVDCRDNTTGINCNDCLPYHYRPITN 369
Query: 48 -KSGDNFCTACNC-------------------NPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+ N C C+C N G+L + N G C CK V G CD
Sbjct: 370 NQYQSNPCLRCDCSGPGIRLNTVTGLLGDCVMNNDGTLPVGVN-PGDCFCKANVMGKNCD 428
Query: 88 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDS-VKGQCESAQLSSRGRVHTELRVQ 143
+C V +Y+ GC+ C CN G++ +T CD+ V G C
Sbjct: 429 KCKVGYYNLQPTNPDGCQECACNVNGTIASTIECDALVTGNC------------------ 470
Query: 144 SRKNFDPAGNRIWDLR--RCKRDTYPLGH-------------GGSLNLQCN-SEGRCQCK 187
P + + R RCK + Y L GG+ +L CN + G+C C+
Sbjct: 471 ------PCKANVEERRCDRCKDNFYGLSADNIAGCTACNCDPGGAFDLPCNKATGQCSCR 524
Query: 188 PGVTGDKCDRCDVNHY 203
+ G +C + +Y
Sbjct: 525 KNILGLQCTEPSILNY 540
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 104/258 (40%), Gaps = 68/258 (26%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTACNCNPIGSLNLQCN---------S 71
G C+DCQ G +CE+C D ++ G + C+ C C +N C+
Sbjct: 1178 GACVDCQHKTQGYSCEECIDGFFGVPTRGTQYDCSECPCYTPRVVNSTCSLENNPITLVD 1237
Query: 72 EGRCQ-CKPGVTGDKCDRCDVNHYDFGE------AGCKSCECNPAGSVKNTPNCDSVKGQ 124
E +C C G G CD C + FG C+ C CN NT C SV G
Sbjct: 1238 EAQCTFCAEGYMGRLCDTC--APFYFGNPKLEFIGTCQKCFCN-----NNTNQCSSVNGV 1290
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG------------- 171
C +F+ GN + RC Y G+
Sbjct: 1291 CLGC------------------DFNTTGN---NCERCAPGFY--GNATERTCTPCDCDLK 1327
Query: 172 GSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNH--YDFGEAGCKSCECNPAGSVKNTPNCD 228
GSL+ C + +G+C+C+PGV G CD C N+ YD G+ GC C CN GSV + C+
Sbjct: 1328 GSLSTVCKHIDGQCECQPGVGGRVCDACIENYYGYDTGDIGCTDCACNEFGSV--SLQCN 1385
Query: 229 SVKGQCECKDNVEGAQCR 246
G C C D V + +
Sbjct: 1386 Q-TGVCTCLDGVNSSSAK 1402
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCD 228
G+L + N G C CK V G CD+C V +Y+ GC+ C CN G++ +T CD
Sbjct: 405 GTLPVGVN-PGDCFCKANVMGKNCDKCKVGYYNLQPTNPDGCQECACNVNGTIASTIECD 463
Query: 229 S-VKGQCECKDNVEGAQC 245
+ V G C CK NVE +C
Sbjct: 464 ALVTGNCPCKANVEERRC 481
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G C CK V +CDRC N Y AGC +C C+P G+ + P C+ GQC C+
Sbjct: 468 GNCPCKANVEERRCDRCKDNFYGLSADNIAGCTACNCDPGGAF-DLP-CNKATGQCSCRK 525
Query: 239 NVEGAQC 245
N+ G QC
Sbjct: 526 NILGLQC 532
>gi|332020404|gb|EGI60824.1| Laminin subunit alpha [Acromyrmex echinatior]
Length = 3661
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 109/233 (46%), Gaps = 38/233 (16%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C +C YY+ C AC+C+ GS+ + C+ EGRCQC+ G +C++
Sbjct: 602 CLANFAGRTCSQCSPGYYKYPE---CVACSCDSHGSIGVSCDGEGRCQCRENFDGIRCEQ 658
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQS 144
C +Y+F C+ C C+PAG V C S+ QC + RV + Q
Sbjct: 659 CKEGYYNF--PTCEGCNCDPAGIVATFQGCGSLPPGELCQC-------KERVEGRICNQC 709
Query: 145 RKNFDPAGNRIWDLRRCKRD-------TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ + W+L+ D P G GS+ +C+++ G+C CKPGVT C
Sbjct: 710 KPLY-------WNLQPYNPDGCEECHCNIP-GVIGSIG-ECDTKTGQCICKPGVTDRGCS 760
Query: 197 RCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
RC Y+ E GC C C+ GSV P CD GQC C+ + G C+
Sbjct: 761 RCIDGTYNLQENNLFGCSDCSCDVGGSVN--PICDKQTGQCPCQPRITGLTCK 811
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 111/261 (42%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG + C + G C +C+ G +CE C YY + C C
Sbjct: 1785 CQCNGHATTCDVNT---------GICQNCKNGTTGDHCEFCEQGYYGNATVGTPTDCLIC 1835
Query: 58 NCN-PIGSLNL----QCNSEG---RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
C P+ S N + N EG C C PG G +C+ C ++Y E CK CEC
Sbjct: 1836 ACPLPVASNNFATGCEVNEEGNKISCDCLPGYYGARCEACAASYYGNPEVYGDYCKPCEC 1895
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ +CDS+ GQC ++ G + + F A R D R C D
Sbjct: 1896 SGNIDTNQIGSCDSITGQCLQCLNNTYGEA---CNLCAPGYFGDAVER-KDCRSCVCDDC 1951
Query: 167 PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT 224
+ H C+S G+C C+ V G++CD C NHY FG GC+ C+C G +
Sbjct: 1952 GMEH-------CDSYSGQCFCRENVIGERCDHCAPNHYGFGTCNGCRPCDC---GLASES 2001
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQC+C V G +C
Sbjct: 2002 SQCDGETGQCKCMPGVTGRRC 2022
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C+ C D Y+ FCT CNC+ G+ C+ ++G C CK G G +CD
Sbjct: 511 CKNNYGGRTCDICEDGYFNYP---FCTYCNCDARGTEPGICDKTDGVCLCKEGYGGVRCD 567
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C +Y G C C C + ++ +CDS G+C S + GR ++
Sbjct: 568 QCTPGYY--GYPNCVPCNC--SSVGSSSISCDST-GKC-SCLANFAGRTCSQC------- 614
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P + + C D++ GS+ + C+ EGRCQC+ G +C++C +Y+F
Sbjct: 615 -SPGYYKYPECVACSCDSH-----GSIGVSCDGEGRCQCRENFDGIRCEQCKEGYYNF-- 666
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQC 245
C+ C C+PAG V C S+ C+CK+ VEG C
Sbjct: 667 PTCEGCNCDPAGIVATFQGCGSLPPGELCQCKERVEGRIC 706
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 86/194 (44%), Gaps = 21/194 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G CL C + G C C Y+ + + C +C C+ G + C+S G+C C+ V
Sbjct: 1912 GQCLQCLNNTYGEACNLCAPGYFGDAVERKDCRSCVCDDCGMEH--CDSYSGQCFCRENV 1969
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G++CD C NHY FG GC+ C+C G + CD GQC+ + R
Sbjct: 1970 IGERCDHCAPNHYGFGTCNGCRPCDC---GLASESSQCDGETGQCKCMPGVTGRRC---- 2022
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCD 199
D W+ RR + G S+ + C++ G+C C PGV G+KCD C
Sbjct: 2023 --------DQCIQGYWNYRRDGCTSCECHTGYSVGVSCDTTTGQCTCLPGVIGEKCDHCP 2074
Query: 200 VNHYDFGEAGCKSC 213
H GC SC
Sbjct: 2075 YRHVLIPSQGCFSC 2088
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 104/248 (41%), Gaps = 69/248 (27%)
Query: 28 DCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC------NPIGSLN------LQC--N 70
DC G CE C +YY + GD +C C C N IGS + LQC N
Sbjct: 1862 DCLPGYYGARCEACAASYYGNPEVYGD-YCKPCECSGNIDTNQIGSCDSITGQCLQCLNN 1920
Query: 71 SEGRC--QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
+ G C PG GD +R D C+SC C+ G +CDS GQC
Sbjct: 1921 TYGEACNLCAPGYFGDAVERKD----------CRSCVCDDCG----MEHCDSYSGQCFC- 1965
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH----------GGSLNLQC 178
R+N G R C + Y G S + QC
Sbjct: 1966 ----------------RENV--IGER---CDHCAPNHYGFGTCNGCRPCDCGLASESSQC 2004
Query: 179 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+ E G+C+C PGVTG +CD+C ++++ GC SCEC+ SV + CD+ GQC C
Sbjct: 2005 DGETGQCKCMPGVTGRRCDQCIQGYWNYRRDGCTSCECHTGYSVGVS--CDTTTGQCTCL 2062
Query: 238 DNVEGAQC 245
V G +C
Sbjct: 2063 PGVIGEKC 2070
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
+ G C C+ + G C+ C N+Y N C C+C + S + QC+ E G+C+C PG
Sbjct: 1959 YSGQCF-CRENVIGERCDHCAPNHYGFGTCNGCRPCDCG-LASESSQCDGETGQCKCMPG 2016
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C ++++ GC SCEC+ SV + CD+ GQC
Sbjct: 2017 VTGRRCDQCIQGYWNYRRDGCTSCECHTGYSVGVS--CDTTTGQC 2059
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 37/260 (14%)
Query: 1 CNCNGFSNRCFFDK---------ELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC G S+ C +D +++ GG C +C+ + +G NC +C+ +Y+
Sbjct: 329 CNCFGHSDECIYDPNIDEKHLSLDIHGNYEGGGICQNCKHNTEGINCNRCKPKFYRPWDK 388
Query: 49 --SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ + C CNC+ S +S G+C+C+ T CD C+ + FG C C+C
Sbjct: 389 PLNATDVCQPCNCDYFYSTGNCSDSTGKCECRKEFTPPNCDTCNYGY--FGYPNCLPCQC 446
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ G+ + +C++ G C +L+ G + L + NF D C +
Sbjct: 447 DLRGT--DGYHCEATDGYC-PCKLNYAGH-YCNLCAEGYYNFP-------DCLPCSCN-- 493
Query: 167 PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
PL G+L+ C+ G C CK G CD C+ ++++ C C C+ G+
Sbjct: 494 PL---GALDDVCDVISGNCTCKNNYGGRTCDICEDGYFNY--PFCTYCNCDARGTEPGI- 547
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD G C CK+ G +C
Sbjct: 548 -CDKTDGVCLCKEGYGGVRC 566
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
GRC C VTG +CD+C+ Y F GC+ C C+P G + CD G C CK+NV
Sbjct: 1418 GRCICPSRVTGQRCDQCEPGTYGFHPIIGCEECNCSPLGVLDGDLQCDLFDGSCRCKENV 1477
Query: 241 EGAQC 245
G QC
Sbjct: 1478 VGRQC 1482
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 82/226 (36%), Gaps = 75/226 (33%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
GG C C+ + G CE C+ +Y G C CNC + C + GRC C
Sbjct: 1376 FGGQC-PCRSNIIGRRCEICKSGFY---GFPRCRPCNCPAL------CERDSGRCICPSR 1425
Query: 81 VTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
VTG +CD+C+ Y F GC+ C C+P G + CD G C
Sbjct: 1426 VTGQRCDQCEPGTYGFHPIIGCEECNCSPLGVLDGDLQCDLFDGSC-------------- 1471
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
RCK + V G +CDRC
Sbjct: 1472 --------------------RCKEN-------------------------VVGRQCDRCR 1486
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ F C+ C+C+ G+ + CD +C CK NV+G C
Sbjct: 1487 AGYSQFPH--CERCDCDSRGTTADI--CDQYTAECFCKANVQGQAC 1528
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 33/190 (17%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL-----QCNSEGRCQCKPGV 81
C+ + DG CE+C++ YY NF C CNC+P G + CQCK V
Sbjct: 647 CRENFDGIRCEQCKEGYY-----NFPTCEGCNCDPAGIVATFQGCGSLPPGELCQCKERV 701
Query: 82 TGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVH 137
G C++C +++ + GC+ C CN G + + CD+ GQC ++ RG
Sbjct: 702 EGRICNQCKPLYWNLQPYNPDGCEECHCNIPGVIGSIGECDTKTGQCICKPGVTDRG--- 758
Query: 138 TELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGD 193
SR ++ N ++ C D GGS+N C+ + G+C C+P +TG
Sbjct: 759 -----CSRCIDGTYNLQENNLFGCSDCSCDV-----GGSVNPICDKQTGQCPCQPRITGL 808
Query: 194 KCDRCDVNHY 203
C HY
Sbjct: 809 TCKEPLKAHY 818
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP 79
G G C C G C++C Y+ D CT+C C+ S+ + C++ G+C C P
Sbjct: 2006 GETGQC-KCMPGVTGRRCDQCIQGYWNYRRDG-CTSCECHTGYSVGVSCDTTTGQCTCLP 2063
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSC 104
GV G+KCD C H GC SC
Sbjct: 2064 GVIGEKCDHCPYRHVLIPSQGCFSC 2088
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 103/251 (41%), Gaps = 64/251 (25%)
Query: 29 CQGDRDGPNCEKCRDNYYQ-KSGD--NFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGD 84
C + G +CE+C YY+ KSG +C C CN G + G CQ CK G TGD
Sbjct: 1754 CPPNYQGLSCEECAPGYYRIKSGPYGGYCAPCQCN--GHATTCDVNTGICQNCKNGTTGD 1811
Query: 85 KCDRCDVNHYDFGEAGCKS-------------------CECNPAGSVKNTPNCDSVKG-- 123
C+ C+ +Y G + CE N G N +CD + G
Sbjct: 1812 HCEFCEQGYYGNATVGTPTDCLICACPLPVASNNFATGCEVNEEG---NKISCDCLPGYY 1868
Query: 124 --QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC--- 178
+CE+ S G + E+ K + +GN DT +G S+ QC
Sbjct: 1869 GARCEACAASYYG--NPEVYGDYCKPCECSGN---------IDTNQIGSCDSITGQCLQC 1917
Query: 179 --NSEGRC--QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
N+ G C PG GD +R D C+SC C+ G +CDS GQC
Sbjct: 1918 LNNTYGEACNLCAPGYFGDAVERKD----------CRSCVCDDCG----MEHCDSYSGQC 1963
Query: 235 ECKDNVEGAQC 245
C++NV G +C
Sbjct: 1964 FCRENVIGERC 1974
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 93/259 (35%), Gaps = 74/259 (28%)
Query: 29 CQGDRDGPNCEKCRDNYYQK-------SGDNFCTACNC--------------NPIGSLNL 67
CQ + GP C C + QK S C CNC SL++
Sbjct: 294 CQHNTCGPQCATCCKGFEQKKWRQSTASQKFICEPCNCFGHSDECIYDPNIDEKHLSLDI 353
Query: 68 QCNSE--GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNC 118
N E G CQ CK G C+RC Y + C+ C C+ +T NC
Sbjct: 354 HGNYEGGGICQNCKHNTEGINCNRCKPKFYRPWDKPLNATDVCQPCNCD---YFYSTGNC 410
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-PLGHGGSLNLQ 177
G+CE RK F P C Y G+ L Q
Sbjct: 411 SDSTGKCE-----------------CRKEFTPPN--------CDTCNYGYFGYPNCLPCQ 445
Query: 178 CN-----------SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
C+ ++G C CK G C+ C +Y+F + C C CNP G++ +
Sbjct: 446 CDLRGTDGYHCEATDGYCPCKLNYAGHYCNLCAEGYYNFPD--CLPCSCNPLGALDDV-- 501
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD + G C CK+N G C
Sbjct: 502 CDVISGNCTCKNNYGGRTC 520
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 76/191 (39%), Gaps = 18/191 (9%)
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF--GEAG--CKSCECNPAGSVKNTPNCDSV 121
++ S +CQC P G C+ C +Y G G C C+CN + CD
Sbjct: 1743 SIPAGSVEQCQCPPNYQGLSCEECAPGYYRIKSGPYGGYCAPCQCNGHAT-----TCDVN 1797
Query: 122 KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE 181
G C++ + + G H E Q G D C + + + N E
Sbjct: 1798 TGICQNCKNGTTGD-HCEFCEQGYYGNATVGTPT-DCLICACPLPVASNNFATGCEVNEE 1855
Query: 182 G---RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC- 234
G C C PG G +C+ C ++Y E CK CEC+ +CDS+ GQC
Sbjct: 1856 GNKISCDCLPGYYGARCEACAASYYGNPEVYGDYCKPCECSGNIDTNQIGSCDSITGQCL 1915
Query: 235 ECKDNVEGAQC 245
+C +N G C
Sbjct: 1916 QCLNNTYGEAC 1926
>gi|354494567|ref|XP_003509408.1| PREDICTED: laminin subunit beta-1 [Cricetulus griseus]
Length = 1837
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C DCQ + G NCE+C+ YYQ N
Sbjct: 386 CNCNEHSSSCHFDMAVFLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDVRDPNL 445
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G++CD C Y G
Sbjct: 446 CEPCTCDPAGSENGGICDGYTDFSAGLIAGQCRCKLHVEGERCDVCKEGFYGLSAEDPFG 505
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R Q N + R
Sbjct: 506 CKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-----QCLPQHWGLSNDLDGCRP 560
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 561 CDCDL-----GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 599
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 108/278 (38%), Gaps = 63/278 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG + C G CL CQ G NCE+C YY
Sbjct: 918 CQCNGHAEDC---------DTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPC 968
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFG 97
SG F +C +PI +L L C C PG G +CD C + DFG
Sbjct: 969 PCPDGPNSGRQFARSCYQDPI-TLQLA------CVCDPGYIGSRCDDCAPGFFGNPSDFG 1021
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-W 156
C+ C+C+ + CD G+C + G H +L + G+ +
Sbjct: 1022 -GSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGD-HCQL-----CQYGYYGDALRQ 1074
Query: 157 DLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE- 207
D R+C + G++ CN + G+C C P V G CD+C N +
Sbjct: 1075 DCRKCV-----CNYLGTVQEHCNGSDCHCDKATGQCLCLPNVIGQNCDQCAPNTWQLASG 1129
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+SC CN A S P+C+ GQC+C G C
Sbjct: 1130 TGCESCNCNAAHSFG--PSCNEFTGQCQCMPGFGGRTC 1165
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C + G NC++C N +Q + C +CNCN S CN G+CQC PG
Sbjct: 1103 GQCL-CLPNVIGQNCDQCAPNTWQLASGTGCESCNCNAAHSFGPSCNEFTGQCQCMPGFG 1161
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C C + + C++C+C+P G TP CD GQC
Sbjct: 1162 GRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQC 1202
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 801 PMTDVCRNIIFSISAMIHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRACNRCAPG 860
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK C+C+ GSV CD+V GQC
Sbjct: 861 TFGFGPNGCKPCDCDLQGSVDAF--CDAVTGQC 891
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GSV CD+V
Sbjct: 830 GSLSSVCDPNGGQCQCRPNVVGRACNRCAPGTFGFGPNGCKPCDCDLQGSVDAF--CDAV 887
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 888 TGQCHCFQGIYARQC 902
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 110/259 (42%), Gaps = 51/259 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE C D Y+ + N C CNCN S L
Sbjct: 347 GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLAT 405
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDS 120
S G C C+ G C++C +Y E C+ C C+PAGS +N CD
Sbjct: 406 GNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDVRDPNLCEPCTCDPAGS-ENGGICDG 464
Query: 121 --------VKGQCESAQLSSRGRVHTELR---VQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
+ GQC R ++H E V + + + + C + PLG
Sbjct: 465 YTDFSAGLIAGQC-------RCKLHVEGERCDVCKEGFYGLSAEDPFGCKSCACN--PLG 515
Query: 170 HGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPN 226
N C+SE G C CK VTG +CD+C H+ GC+ C+C+ G++ N+
Sbjct: 516 TIPGGN-PCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNS-- 572
Query: 227 CDSVKGQCECKDNVEGAQC 245
C GQC C ++ G QC
Sbjct: 573 CSEDSGQCSCLPHMIGRQC 591
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 102/238 (42%), Gaps = 30/238 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS++ C++ G+C C G+
Sbjct: 840 GGQC-QCRPNVVGRACNRCAPGTF-GFGPNGCKPCDCDLQGSVDAFCDAVTGQCHCFQGI 897
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD+V G+C S Q + G H R
Sbjct: 898 YARQCDRCLPGHWGF--PSCQPCQCN-----GHAEDCDTVTGECLSCQDYTTG--HNCER 948
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 949 CLAGYYGDPIIGSGDHCRPCPCPDGPNSGRQFARSCYQDPITLQL----ACVCDPGYIGS 1004
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + DFG C+ C+C+ + CD G+C +C + EG C+
Sbjct: 1005 RCDDCAPGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQ 1061
>gi|301755687|ref|XP_002913688.1| PREDICTED: laminin subunit beta-1-like [Ailuropoda melanoleuca]
Length = 1786
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
C+CN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ Y+Q N
Sbjct: 335 CHCNEHSSSCHFDMAVYLATGNVTGGVCDDCQHNTMGRNCEQCKPFYFQHPERDVRDPNL 394
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ C+ C Y G
Sbjct: 395 CERCTCDPAGSQNGGICDSYTDFSTGLIAGQCRCKLHVEGEHCEICKEGFYGLSAEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGSPCDSETGYCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P V G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCSAESGQCGCRPHVIGRQCNEVESGYY 548
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G +C+ CR YY + C C CN +G++ CN + G+C
Sbjct: 995 GRCLRCLYHTEGEHCQLCRAGYYGDALQQDCRKCVCNYLGTMPEHCNGSDCQCDKTTGQC 1054
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCE 126
C P V G CDRC N + GC C C+PA S P+C+ GQC+
Sbjct: 1055 SCLPNVVGQNCDRCAPNTWQLASGTGCDPCSCDPAHSFG--PSCNEFTGQCQ 1104
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 109/274 (39%), Gaps = 55/274 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG + C G CL CQ G NCE+C YY
Sbjct: 867 CQCNGHAEDC---------DSGTGACLGCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFG 97
SG F ++C +P+ +L L C C PG G +CD C + D G
Sbjct: 918 PCPDGPDSGRQFASSCYQDPV-TLQLA------CVCHPGYIGSRCDDCAPGFFGNPSDVG 970
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-W 156
C+ C C+ + CD G+C + G H +L R + G+ +
Sbjct: 971 -GSCQPCLCHHNIDTTDPEACDKETGRCLRCLYHTEGE-HCQL---CRAGY--YGDALQQ 1023
Query: 157 DLRRC---KRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCK 211
D R+C T P GS + QC+ + G+C C P V G CDRC N + GC
Sbjct: 1024 DCRKCVCNYLGTMPEHCNGS-DCQCDKTTGQCSCLPNVVGQNCDRCAPNTWQLASGTGCD 1082
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+PA S P+C+ GQC+C G C
Sbjct: 1083 PCSCDPAHSFG--PSCNEFTGQCQCMPGFGGRTC 1114
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G CDRC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCDRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
+ FG +GC+ CEC+ GSV C + GQC+
Sbjct: 810 TFGFGPSGCRPCECHLQGSVNAF--CHPITGQCQ 841
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 94/233 (40%), Gaps = 49/233 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGSLNLQCNSEGRCQ 76
GHC+ C+ + G NCE+C D Y+ + N C C+CN S C+ +
Sbjct: 296 GHCM-CRHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCHCNEHSS---SCHFDMAVY 351
Query: 77 CKPG-VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
G VTG CD C H G ++CE QC+ R
Sbjct: 352 LATGNVTGGVCDDC--QHNTMG----RNCE------------------QCKPFYFQHPER 387
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+ + R DPAG++ + C D+Y G + G+C+CK V G+ C
Sbjct: 388 DVRDPNLCERCTCDPAGSQNGGI--C--DSYTDFSTGLI------AGQCRCKLHVEGEHC 437
Query: 196 DRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C Y GCKSC CNP G++ CDS G C CK V G C
Sbjct: 438 EICKEGFYGLSAEDPFGCKSCACNPLGTIPGGSPCDSETGYCYCKRLVTGQHC 490
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 96/238 (40%), Gaps = 30/238 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C C C+ GS+N C+ G+CQC GV
Sbjct: 789 GGQC-QCRPNVVGRTCDRCAPGTF-GFGPSGCRPCECHLQGSVNAFCHPITGQCQCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CD+C ++ F C+ C+CN + +CDS G C Q + G H R
Sbjct: 847 YARQCDQCLPGYWGF--PSCQPCQCN-----GHAEDCDSGTGACLGCQDYTTG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFASSCYQDPVTLQL----ACVCHPGYIGS 953
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + D G C+ C C+ + CD G+C C + EG C+
Sbjct: 954 RCDDCAPGFFGNPSDVG-GSCQPCLCHHNIDTTDPEACDKETGRCLRCLYHTEGEHCQ 1010
>gi|148675372|gb|EDL07319.1| mCG6728, isoform CRA_a [Mus musculus]
Length = 3635
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ DGP+C++C Y+ G C AC C+P G+L+ QC G C C+PG TG C
Sbjct: 530 CRPGFDGPHCDRCLPGYH---GYPDCHACACDPRGALDQQCGVGGLCHCRPGYTGATCQE 586
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV---HTELRVQSR 145
C Y F C C C+ GS+ T CD GQC R RV H ++ V
Sbjct: 587 CSPGFYGF--PSCIPCHCSADGSLHTT--CDPTTGQCR-----CRPRVTGLHCDMCVPGA 637
Query: 146 KNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD 204
NF C+ + +P G + ++ C C+ V G CDRC ++
Sbjct: 638 YNFP----------YCEAGSCHPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGYWG 687
Query: 205 FGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ GC C C+P G++ C GQC CK +V G C +
Sbjct: 688 LSASNPEGCTRCSCDPRGTLGGVTECQG-NGQCFCKAHVCGKTCAA 732
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 93/232 (40%), Gaps = 56/232 (24%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G HC C GP+C C+ C+ G N C+ E G+C C+ G
Sbjct: 446 GAHCELCAPGFHGPSCHPCQ----------------CSSPGVANSLCDPESGQCMCRTGF 489
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
GD+CD C + ++ F C+ C C+PAG++ CD G+C
Sbjct: 490 EGDRCDHCALGYFHF--PLCQLCGCSPAGTLPE--GCDEA-GRC---------------- 528
Query: 142 VQSRKNFD--------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
Q R FD P + D C D G+L+ QC G C C+PG TG
Sbjct: 529 -QCRPGFDGPHCDRCLPGYHGYPDCHACACDPR-----GALDQQCGVGGLCHCRPGYTGA 582
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C Y F C C C+ GS+ T CD GQC C+ V G C
Sbjct: 583 TCQECSPGFYGF--PSCIPCHCSADGSLHTT--CDPTTGQCRCRPRVTGLHC 630
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 118/290 (40%), Gaps = 76/290 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G + C++D E+ R GG CLDCQ G NCE+C +++
Sbjct: 281 CNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQ 340
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-------- 98
+ C C+C + + GRC C+P TG+ C C + DF
Sbjct: 341 PLDSPHVCRPCDCESDFTDGTCEDLTGRCYCRPNFTGELCAACAEGYTDFPHCYPLPSFP 400
Query: 99 ----------AG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
AG +C+CN AG+ N D G+C + + RG H EL
Sbjct: 401 HNDTREQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRC-VCKPNFRG-AHCEL------- 451
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNSE-GRCQCKPGVTGDKC 195
C P HG G N C+ E G+C C+ G GD+C
Sbjct: 452 -------------CA----PGFHGPSCHPCQCSSPGVANSLCDPESGQCMCRTGFEGDRC 494
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D C + ++ F C+ C C+PAG++ CD G+C+C+ +G C
Sbjct: 495 DHCALGYFHF--PLCQLCGCSPAGTLPE--GCDEA-GRCQCRPGFDGPHC 539
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 109/262 (41%), Gaps = 42/262 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G C+ CQ + +G CE+CR + N C +C
Sbjct: 1782 CQCHGHSDRCLPGS---------GICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSC 1832
Query: 58 NCNPIGSLN-------LQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
C P+ + + N +C C+PG G C+RC + + C+ C+C+
Sbjct: 1833 PC-PLAVPSNNFADGCVLRNGRTQCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDCS 1891
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DT 165
G +CD + G C + G H E + F GN + C R D
Sbjct: 1892 GNGDPNMIFSDCDPLTGACRGCLRHTTGP-HCE---RCAPGF--YGNALLP-GNCTRCDC 1944
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
P G C+ + GRC CK GVTG +CDRC ++ F + GC+ C C PA
Sbjct: 1945 SPCG-----TETCDPQSGRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGS- 1998
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
C GQC C+ G QC
Sbjct: 1999 --ECHPQSGQCHCQPGTTGPQC 2018
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP+CE+C +Y + CT C+C
Sbjct: 1890 CSGNGDPNMIFSDCDPLT-----GACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRCDC 1944
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNC 118
+P G+ S GRC CK GVTG +CDRC ++ F + GC+ C C PA C
Sbjct: 1945 SPCGTETCDPQS-GRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGSE---C 2000
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCKRDTYPLGHGGSLNL 176
GQC H + + + A W L + C+R P GH
Sbjct: 2001 HPQSGQC-----------HCQPGTTGPQCLECAPG-YWGLPEKGCRRCQCPRGH------ 2042
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNH 202
C+ G C C PG++G++CD C H
Sbjct: 2043 -CDPHTGHCTCPPGLSGERCDTCSQQH 2068
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+P V G +CD C Y G C+ C+C+ AG++ + CD + GQC CK+NV+
Sbjct: 1470 GQCRCRPNVAGRRCDTCAPGFY--GYPSCRPCDCHEAGTMASV--CDPLTGQCHCKENVQ 1525
Query: 242 GAQC 245
G++C
Sbjct: 1526 GSRC 1529
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 92/232 (39%), Gaps = 44/232 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTA-----CNCNPIGSLNLQCNSE---GRCQCKPG 80
+G D P+C + + + A C+CN G+ C + GRC CKP
Sbjct: 384 AEGYTDFPHCYPLPSFPHNDTREQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRCVCKPN 443
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G C+ C F C C+C+ G + CD GQC
Sbjct: 444 FRGAHCELCAPG---FHGPSCHPCQCSSPGVANSL--CDPESGQC--------------- 483
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPL------GHGGSLNLQCNSEGRCQCKPGVTGDK 194
R F+ G+R D +PL G+L C+ GRCQC+PG G
Sbjct: 484 --MCRTGFE--GDRC-DHCALGYFHFPLCQLCGCSPAGTLPEGCDEAGRCQCRPGFDGPH 538
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CDRC ++ + + C +C C+P G++ C V G C C+ GA C+
Sbjct: 539 CDRCLPGYHGYPD--CHACACDPRGALDQ--QC-GVGGLCHCRPGYTGATCQ 585
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEGRCQCKPGVTGD 84
C+ +GP+C++C+ Y+ S N CT C+C+P G+L +C G+C CK V G
Sbjct: 669 CRAHVEGPSCDRCKPGYWGLSASNPEGCTRCSCDPRGTLGGVTECQGNGQCFCKAHVCGK 728
Query: 85 KCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
C C + A GC+SC C+ G++
Sbjct: 729 TCAACKDGFFGLDYADYFGCRSCRCDVGGAL 759
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG TG +C C ++ E GC+ C+C P G +CD G C C +
Sbjct: 2005 GQCHCQPGTTGPQCLECAPGYWGLPEKGCRRCQC-PRG------HCDPHTGHCTCPPGLS 2057
Query: 242 GAQC 245
G +C
Sbjct: 2058 GERC 2061
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C+ C +Y G C C+C+ G++ C+ G+C CK V G +CD
Sbjct: 1474 CRPNVAGRRCDTCAPGFY---GYPSCRPCDCHEAGTMASVCDPLTGQCHCKENVQGSRCD 1530
Query: 88 RCDVNHYDFGEAGCKSC 104
+C V + A K C
Sbjct: 1531 QCRVGTFSLDAANPKGC 1547
>gi|114572620|ref|XP_514197.2| PREDICTED: usherin [Pan troglodytes]
Length = 5202
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 131/271 (48%), Gaps = 45/271 (16%)
Query: 1 CNCNGFSNRCFFD--KELY---NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--- 52
C CN S C ++ +L+ + G GG C DC+ + G NCE C+D ++++ G +
Sbjct: 575 CQCNSHSKSCHYNISVDLFPFEHFRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGADPSA 634
Query: 53 --FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C C+C+ +G+ N + C+ G +C CK V+G +C++C Y+ E GC C
Sbjct: 635 IDVCKPCDCDKVGTGNGSILCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPC 694
Query: 105 ECNPAGSVKNTPNCDSVKGQ--CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
CN +G+V C GQ C++ + R R NF G + LR
Sbjct: 695 NCNTSGTVDGDITCHQNSGQCKCKANVIGLRC---------DRCNF---GFKF--LRSFN 740
Query: 163 RDTYPLG-------HGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
D G GS+N CN G+C+CK G +CD C N Y CK+C+
Sbjct: 741 DD----GCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQCDTCRENFYGLDVTNCKACD 796
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ AGS+ T C++ GQC CK NVEG QC
Sbjct: 797 CDTAGSLPGT-VCNAKTGQCICKPNVEGRQC 826
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + N Y + ++F C CNC+ G++N L C+ S G+C CK
Sbjct: 813 GQCI-CKPNVEGRQCNKCLEGNVYLRQNNSFLCLPCNCDKTGTINGSLLCDKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHTCNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASIAGQRCDQCRDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ G+V +T C+S+ GQC S G+ + R
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHT--CNSLTGQCVCQDASIAGQRCDQCR- 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++CRD+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCVCQDASIAGQRCDQCRDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1026 FVTGSKCDACVPSASHLD 1043
>gi|91095063|ref|XP_972560.1| PREDICTED: similar to AGAP001381-PA [Tribolium castaneum]
Length = 1759
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 111/265 (41%), Gaps = 80/265 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + C FD LY TG GG C CQ + GPNCE+C+ YY+ +
Sbjct: 334 CNCNNHATSCHFDAALYEATGRISGGVCDGCQHNTMGPNCEQCKPFYYRDPQRDIQDPEV 393
Query: 54 CTACNCNPIGSL-NLQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P GSL N C+S G C CK V G +CD C ++F E+ G
Sbjct: 394 CRPCDCDPRGSLDNGICDSITDAENNLIAGSCHCKTNVEGRRCDICKNGFWNFTESNPDG 453
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+SC CN G++ N C+ G+C
Sbjct: 454 CQSCTCNTFGTIDNQ-GCNVYNGECT---------------------------------- 478
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
CKR Y G CN QC P G R GC+ C+C+P GS
Sbjct: 479 CKR--YVTGR------DCN-----QCLPEYWGLSEKR----------DGCQPCDCDPGGS 515
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
N NCD + GQC C++++ G C
Sbjct: 516 FDN--NCDVITGQCLCREHMTGRTC 538
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 120/262 (45%), Gaps = 36/262 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C+CNG ++ C G C++C+ + +G NCE+C D +Y + + D C C
Sbjct: 859 CDCNGHADIC---------DSKTGACINCKDNTEGHNCEQCVDGFYGDPRLNVDIPCRPC 909
Query: 58 NC--NPIG--SLNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCE 105
C +P S +C+ E C+C G +G +CD C N++ E C+ C+
Sbjct: 910 PCPGSPWSNHSYADRCSLEASTKDVICECHVGYSGSRCDVCSDNYFGNPEEPGGLCQPCD 969
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
CN + NCD G+C+ + G H E+ P R D C+
Sbjct: 970 CNDKIDILKPGNCDPHTGKCKQCLYDTTGD-HCEV-------CRPGFFRYSDDMMCEECV 1021
Query: 166 -YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKN 223
+PLG S S G+C C P VTG CD+C NH+ GC+ C C+P GS++
Sbjct: 1022 CHPLGTNSSAGPCDPSSGQCVCLPNVTGLNCDQCIANHWKIASGEGCEPCNCDPQGSLR- 1080
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
P C+ GQCEC+ G QC
Sbjct: 1081 -PQCNLFDGQCECRPGFGGRQC 1101
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 102/203 (50%), Gaps = 25/203 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ--CN-SEGRCQCK 78
H G C C D G +CE CR +++ S D C C C+P+G+ + C+ S G+C C
Sbjct: 985 HTGKCKQCLYDTTGDHCEVCRPGFFRYSDDMMCEECVCHPLGTNSSAGPCDPSSGQCVCL 1044
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG CD+C NH+ GC+ C C+P GS++ P C+ GQCE + GR
Sbjct: 1045 PNVTGLNCDQCIANHWKIASGEGCEPCNCDPQGSLR--PQCNLFDGQCE-CRPGFGGRQC 1101
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
E +R DP + R CK D GS +LQC+ G C+C PG+ G CD
Sbjct: 1102 NE--CVARFWGDPKV----ECRECKCDA-----RGSRSLQCDMRTGACKCLPGIGGYNCD 1150
Query: 197 RCDVNHYDFGEAGCKSCECNPAG 219
RCD + G+A EC P G
Sbjct: 1151 RCDRGY--LGQAP----ECIPCG 1167
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 81/206 (39%), Gaps = 73/206 (35%)
Query: 45 YYQKSGD---NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAG 100
YY G N +C C+P GSL+ C+ G C CK V G +CD+C Y FG G
Sbjct: 750 YYSSIGAYIFNGAFSCQCDPTGSLSKLCDEYGGHCTCKLNVVGRRCDQCAPGTYGFGPEG 809
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC+CN G++ N C++ GQC +
Sbjct: 810 CKSCDCNSIGALDNF--CNATTGQC----------------------------------K 833
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
C+ +TY G +CD+C ++F C+ C+CN
Sbjct: 834 CRANTY-------------------------GRECDQCRTGFWNF--PNCQRCDCNGHAD 866
Query: 221 VKNTPNCDSVKGQC-ECKDNVEGAQC 245
+ CDS G C CKDN EG C
Sbjct: 867 I-----CDSKTGACINCKDNTEGHNC 887
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-QCKPGV 81
+C G C+ C DNY+ + C C+CN + N G+C QC
Sbjct: 937 ECHVGYSGSRCDVCSDNYFGNPEEPGGLCQPCDCNDKIDILKPGNCDPHTGKCKQCLYDT 996
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQC----ESAQLSSRGRV 136
TGD C+ C + + + C+ C C+P G+ + CD GQC L+ +
Sbjct: 997 TGDHCEVCRPGFFRYSDDMMCEECVCHPLGTNSSAGPCDPSSGQCVCLPNVTGLNCDQCI 1056
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
++ S + +P C D GSL QCN +G+C+C+PG G +C
Sbjct: 1057 ANHWKIASGEGCEP----------CNCDP-----QGSLRPQCNLFDGQCECRPGFGGRQC 1101
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C + + C+ C+C+ GS + CD G C+C + G C
Sbjct: 1102 NECVARFWGDPKVECRECKCDARGS--RSLQCDMRTGACKCLPGIGGYNC 1149
>gi|281349144|gb|EFB24728.1| hypothetical protein PANDA_001514 [Ailuropoda melanoleuca]
Length = 1791
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
C+CN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ Y+Q N
Sbjct: 340 CHCNEHSSSCHFDMAVYLATGNVTGGVCDDCQHNTMGRNCEQCKPFYFQHPERDVRDPNL 399
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ C+ C Y G
Sbjct: 400 CERCTCDPAGSQNGGICDSYTDFSTGLIAGQCRCKLHVEGEHCEICKEGFYGLSAEDPFG 459
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 460 CKSCACNPLGTIPGGSPCDSETGYCYCK------------RLVTGQHCDQCLVEHWGLSN 507
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P V G +C+ + +Y
Sbjct: 508 DLDGCRPCDCDL-----GGALNNSCSAESGQCGCRPHVIGRQCNEVESGYY 553
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G +C+ CR YY + C C CN +G++ CN + G+C
Sbjct: 1000 GRCLRCLYHTEGEHCQLCRAGYYGDALQQDCRKCVCNYLGTMPEHCNGSDCQCDKTTGQC 1059
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCE 126
C P V G CDRC N + GC C C+PA S P+C+ GQC+
Sbjct: 1060 SCLPNVVGQNCDRCAPNTWQLASGTGCDPCSCDPAHSFG--PSCNEFTGQCQ 1109
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 109/274 (39%), Gaps = 55/274 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG + C G CL CQ G NCE+C YY
Sbjct: 872 CQCNGHAEDC---------DSGTGACLGCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPC 922
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFG 97
SG F ++C +P+ +L L C C PG G +CD C + D G
Sbjct: 923 PCPDGPDSGRQFASSCYQDPV-TLQLA------CVCHPGYIGSRCDDCAPGFFGNPSDVG 975
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-W 156
C+ C C+ + CD G+C + G H +L R + G+ +
Sbjct: 976 -GSCQPCLCHHNIDTTDPEACDKETGRCLRCLYHTEGE-HCQL---CRAGY--YGDALQQ 1028
Query: 157 DLRRC---KRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCK 211
D R+C T P GS + QC+ + G+C C P V G CDRC N + GC
Sbjct: 1029 DCRKCVCNYLGTMPEHCNGS-DCQCDKTTGQCSCLPNVVGQNCDRCAPNTWQLASGTGCD 1087
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+PA S P+C+ GQC+C G C
Sbjct: 1088 PCSCDPAHSFG--PSCNEFTGQCQCMPGFGGRTC 1119
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G CDRC
Sbjct: 755 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCDRCAPG 814
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
+ FG +GC+ CEC+ GSV C + GQC+
Sbjct: 815 TFGFGPSGCRPCECHLQGSVNAF--CHPITGQCQ 846
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 94/233 (40%), Gaps = 49/233 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGSLNLQCNSEGRCQ 76
GHC+ C+ + G NCE+C D Y+ + N C C+CN S C+ +
Sbjct: 301 GHCM-CRHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCHCNEHSS---SCHFDMAVY 356
Query: 77 CKPG-VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
G VTG CD C H G ++CE QC+ R
Sbjct: 357 LATGNVTGGVCDDC--QHNTMG----RNCE------------------QCKPFYFQHPER 392
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+ + R DPAG++ + C D+Y G + G+C+CK V G+ C
Sbjct: 393 DVRDPNLCERCTCDPAGSQNGGI--C--DSYTDFSTGLI------AGQCRCKLHVEGEHC 442
Query: 196 DRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C Y GCKSC CNP G++ CDS G C CK V G C
Sbjct: 443 EICKEGFYGLSAEDPFGCKSCACNPLGTIPGGSPCDSETGYCYCKRLVTGQHC 495
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 96/238 (40%), Gaps = 30/238 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C C C+ GS+N C+ G+CQC GV
Sbjct: 794 GGQC-QCRPNVVGRTCDRCAPGTF-GFGPSGCRPCECHLQGSVNAFCHPITGQCQCFQGV 851
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CD+C ++ F C+ C+CN + +CDS G C Q + G H R
Sbjct: 852 YARQCDQCLPGYWGF--PSCQPCQCN-----GHAEDCDSGTGACLGCQDYTTG--HNCER 902
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 903 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFASSCYQDPVTLQLA----CVCHPGYIGS 958
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + D G C+ C C+ + CD G+C C + EG C+
Sbjct: 959 RCDDCAPGFFGNPSDVG-GSCQPCLCHHNIDTTDPEACDKETGRCLRCLYHTEGEHCQ 1015
>gi|426385429|ref|XP_004059217.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-1, partial
[Gorilla gorilla gorilla]
Length = 2995
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 105/237 (44%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GS + C+ E G C CK
Sbjct: 847 GECLKCLGNTDGAHCERCADGFY---GDAVTAKNCRACECHVKGSHSAVCHLETGLCDCK 903
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC+ C C+ AGSV + C +GQC
Sbjct: 904 PNVTGQQCDQCLHGYYGLDSGHGCQPCNCSVAGSVSD--GCTD-EGQCHCVP-------- 952
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC R Y G C+ E G C C P
Sbjct: 953 -----------GVAGKRC---DRCARGFYAYQDGSCTPCDCPHTQNTCDPETGECVCPPH 998
Query: 190 VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ + E GC++C C+ GS + CD V G C+CK G C
Sbjct: 999 TQGVKCEECEDGHWGYDVEVGCQACNCSLVGSTHH--RCDVVTGHCQCKSKFGGQAC 1053
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D K+ N G GG C++C + G NCE C D YY+
Sbjct: 306 CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETCIDGYYRPHKV 365
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C CNC+P+GSL+ C + G+C CK G TG+KCDRC + +
Sbjct: 366 SPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLQNGKRPGQCPCKEGYTGEKCDRCQLGYK 425
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
D+ C SC CNP GS + P
Sbjct: 426 DY--PTCVSCGCNPVGSASDEP 445
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 107/227 (47%), Gaps = 28/227 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ + G C++C YY + C CNC+ GS++ C EG+C C PGV G +CD
Sbjct: 901 DCKPNVTGQQCDQCLHGYYGLDSGHGCQPCNCSVAGSVSDGCTDEGQCHCVPGVAGKRCD 960
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y + + C C+C +NT CD G+C HT+ V+ +
Sbjct: 961 RCARGFYAYQDGSCTPCDCP---HTQNT--CDPETGECVCPP-------HTQ-GVKCEEC 1007
Query: 148 FDPAGNRIWDLRR-CKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 205
D G+ +D+ C+ L GS + +C+ G CQCK G CD+C + + DF
Sbjct: 1008 ED--GHWGYDVEVGCQACNCSL--VGSTHHRCDVVTGHCQCKSKFGGQACDQCSLGYRDF 1063
Query: 206 GEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
+ C C+C+ G+ + N C G C CK+NV G QC
Sbjct: 1064 PD--CVPCDCDLRGTSGDACNLEQGLCGCVEETGACPCKENVFGPQC 1108
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG+KCDRC + + D+ C SC CNP GS + P G C CK+NVE
Sbjct: 404 GQCPCKEGYTGEKCDRCQLGYKDY--PTCVSCGCNPVGSASDEP----CTGPCVCKENVE 457
Query: 242 GAQC 245
G C
Sbjct: 458 GKAC 461
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNFCTACNCNPIGSLN-------LQCNS 71
G C+ C + G +CE+C +Y S GD C C C + N L
Sbjct: 734 GVCIACAHNTTGDHCEQCLPGFYGDSSRGTPGD--CQPCACPLTIASNNFSPTCHLNDGD 791
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
E C +C PG +G C+RC +Y C C+C+ +CDSV G+C
Sbjct: 792 EVVCDRCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPSEAGHCDSVTGECLK 851
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ GS + C+ E G C C
Sbjct: 852 CLGNTDG-AHCE---RCADGFYGDAVTAKNCRACECHV-----KGSHSAVCHLETGLCDC 902
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KP VTG +CD+C +Y GC+ C C+ AGSV + C +GQC C V G +C
Sbjct: 903 KPNVTGQQCDQCLHGYYGLDSGHGCQPCNCSVAGSVSD--GCTD-EGQCHCVPGVAGKRC 959
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H C C +G +CE+C YY Q G + C C+CNP GS++ C+ + G+C C
Sbjct: 1451 HDFRCDACLLGYEGKHCERCSSGYYGNPQTPGGS-CQKCDCNPHGSVHGDCDRTSGQCVC 1509
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+ G +G +CD C++ H E C SC+ G + N
Sbjct: 1510 RLGASGLRCDECELRHI-LMETDCVSCDDECVGVLLN 1545
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C G CE+C D ++ + C ACNC+ +GS + +C+ G CQCK
Sbjct: 991 GECV-CPPHTQGVKCEECEDGHWGYDVEVGCQACNCSLVGSTHHRCDVVTGHCQCKSKFG 1049
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD+C + + DF + C C+C+ G+
Sbjct: 1050 GQACDQCSLGYRDFPD--CVPCDCDLRGT 1076
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQCNSEG----RC 75
G CL+C + G +C+ C YY K + D AC +P S + C EG RC
Sbjct: 1396 GKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPASFSPTCVLEGDHDFRC 1455
Query: 76 -QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C G G C+RC +Y + C+ C+CNP GSV +CD GQC
Sbjct: 1456 DACLLGYEGKHCERCSSGYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTSGQC 1507
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 176 LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVK 231
L+ + + RC C G G C+RC +Y + C+ C+CNP GSV +CD
Sbjct: 1447 LEGDHDFRCDACLLGYEGKHCERCSSGYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTS 1504
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 1505 GQCVCRLGASGLRC 1518
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNSEGRCQCKPGVTGDKCD 87
C+ G C++C+ Y C +C CNP+GS + + C G C CK V G CD
Sbjct: 408 CKEGYTGEKCDRCQLGYKDYPT---CVSCGCNPVGSASDEPCT--GPCVCKENVEGKACD 462
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
RC Y+ E GC C C
Sbjct: 463 RCKPGFYNLKEKNPRGCSECFC 484
>gi|124487155|ref|NP_001074640.1| laminin subunit alpha-5 precursor [Mus musculus]
gi|341941134|sp|Q61001.4|LAMA5_MOUSE RecName: Full=Laminin subunit alpha-5; AltName: Full=Laminin-10
subunit alpha; AltName: Full=Laminin-11 subunit alpha;
AltName: Full=Laminin-15 subunit alpha; Flags: Precursor
Length = 3718
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ DGP+C++C Y+ G C AC C+P G+L+ QC G C C+PG TG C
Sbjct: 613 CRPGFDGPHCDRCLPGYH---GYPDCHACACDPRGALDQQCGVGGLCHCRPGYTGATCQE 669
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV---HTELRVQSR 145
C Y F C C C+ GS+ T CD GQC R RV H ++ V
Sbjct: 670 CSPGFYGF--PSCIPCHCSADGSLHTT--CDPTTGQCR-----CRPRVTGLHCDMCVPGA 720
Query: 146 KNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD 204
NF C+ + +P G + ++ C C+ V G CDRC ++
Sbjct: 721 YNFP----------YCEAGSCHPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGYWG 770
Query: 205 FGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ GC C C+P G++ C GQC CK +V G C +
Sbjct: 771 LSASNPEGCTRCSCDPRGTLGGVTECQG-NGQCFCKAHVCGKTCAA 815
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 93/232 (40%), Gaps = 56/232 (24%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G HC C GP+C C+ C+ G N C+ E G+C C+ G
Sbjct: 529 GAHCELCAPGFHGPSCHPCQ----------------CSSPGVANSLCDPESGQCMCRTGF 572
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
GD+CD C + ++ F C+ C C+PAG++ CD G+C
Sbjct: 573 EGDRCDHCALGYFHF--PLCQLCGCSPAGTLPE--GCDEA-GRC---------------- 611
Query: 142 VQSRKNFD--------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
Q R FD P + D C D G+L+ QC G C C+PG TG
Sbjct: 612 -QCRPGFDGPHCDRCLPGYHGYPDCHACACDPR-----GALDQQCGVGGLCHCRPGYTGA 665
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C Y F C C C+ GS+ T CD GQC C+ V G C
Sbjct: 666 TCQECSPGFYGF--PSCIPCHCSADGSLHTT--CDPTTGQCRCRPRVTGLHC 713
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 118/290 (40%), Gaps = 76/290 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G + C++D E+ R GG CLDCQ G NCE+C +++
Sbjct: 364 CNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQ 423
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-------- 98
+ C C+C + + GRC C+P TG+ C C + DF
Sbjct: 424 PLDSPHVCRPCDCESDFTDGTCEDLTGRCYCRPNFTGELCAACAEGYTDFPHCYPLPSFP 483
Query: 99 ----------AG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
AG +C+CN AG+ N D G+C + + RG H EL
Sbjct: 484 HNDTREQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRC-VCKPNFRG-AHCEL------- 534
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNSE-GRCQCKPGVTGDKC 195
C P HG G N C+ E G+C C+ G GD+C
Sbjct: 535 -------------CA----PGFHGPSCHPCQCSSPGVANSLCDPESGQCMCRTGFEGDRC 577
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D C + ++ F C+ C C+PAG++ CD G+C+C+ +G C
Sbjct: 578 DHCALGYFHF--PLCQLCGCSPAGTLPE--GCDEA-GRCQCRPGFDGPHC 622
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 109/262 (41%), Gaps = 42/262 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G C+ CQ + +G CE+CR + N C +C
Sbjct: 1865 CQCHGHSDRCLPGS---------GICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSC 1915
Query: 58 NCNPIGSLN-------LQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
C P+ + + N +C C+PG G C+RC + + C+ C+C+
Sbjct: 1916 PC-PLAVPSNNFADGCVLRNGRTQCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDCS 1974
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DT 165
G +CD + G C + G H E + F GN + C R D
Sbjct: 1975 GNGDPNMIFSDCDPLTGACRGCLRHTTGP-HCE---RCAPGF--YGNALLP-GNCTRCDC 2027
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
P G C+ + GRC CK GVTG +CDRC ++ F + GC+ C C PA
Sbjct: 2028 SPCG-----TETCDPQSGRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGS- 2081
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
C GQC C+ G QC
Sbjct: 2082 --ECHPQSGQCHCQPGTTGPQC 2101
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP+CE+C +Y + CT C+C
Sbjct: 1973 CSGNGDPNMIFSDCDPLT-----GACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRCDC 2027
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNC 118
+P G+ S GRC CK GVTG +CDRC ++ F + GC+ C C PA C
Sbjct: 2028 SPCGTETCDPQS-GRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGSE---C 2083
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCKRDTYPLGHGGSLNL 176
GQC H + + + A W L + C+R P GH
Sbjct: 2084 HPQSGQC-----------HCQPGTTGPQCLECAPG-YWGLPEKGCRRCQCPRGH------ 2125
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNH 202
C+ G C C PG++G++CD C H
Sbjct: 2126 -CDPHTGHCTCPPGLSGERCDTCSQQH 2151
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+P V G +CD C Y G C+ C+C+ AG++ + CD + GQC CK+NV+
Sbjct: 1553 GQCRCRPNVAGRRCDTCAPGFY--GYPSCRPCDCHEAGTMASV--CDPLTGQCHCKENVQ 1608
Query: 242 GAQC 245
G++C
Sbjct: 1609 GSRC 1612
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 92/232 (39%), Gaps = 44/232 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTA-----CNCNPIGSLNLQCNSE---GRCQCKPG 80
+G D P+C + + + A C+CN G+ C + GRC CKP
Sbjct: 467 AEGYTDFPHCYPLPSFPHNDTREQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRCVCKPN 526
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G C+ C F C C+C+ G + CD GQC
Sbjct: 527 FRGAHCELCAPG---FHGPSCHPCQCSSPGVANSL--CDPESGQC--------------- 566
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPL------GHGGSLNLQCNSEGRCQCKPGVTGDK 194
R F+ G+R D +PL G+L C+ GRCQC+PG G
Sbjct: 567 --MCRTGFE--GDRC-DHCALGYFHFPLCQLCGCSPAGTLPEGCDEAGRCQCRPGFDGPH 621
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CDRC ++ + + C +C C+P G++ C V G C C+ GA C+
Sbjct: 622 CDRCLPGYHGYPD--CHACACDPRGALDQ--QC-GVGGLCHCRPGYTGATCQ 668
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEGRCQCKPGVTGD 84
C+ +GP+C++C+ Y+ S N CT C+C+P G+L +C G+C CK V G
Sbjct: 752 CRAHVEGPSCDRCKPGYWGLSASNPEGCTRCSCDPRGTLGGVTECQGNGQCFCKAHVCGK 811
Query: 85 KCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
C C + A GC+SC C+ G++
Sbjct: 812 TCAACKDGFFGLDYADYFGCRSCRCDVGGAL 842
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG TG +C C ++ E GC+ C+C P G +CD G C C +
Sbjct: 2088 GQCHCQPGTTGPQCLECAPGYWGLPEKGCRRCQC-PRG------HCDPHTGHCTCPPGLS 2140
Query: 242 GAQC 245
G +C
Sbjct: 2141 GERC 2144
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C+ C +Y G C C+C+ G++ C+ G+C CK V G +CD
Sbjct: 1557 CRPNVAGRRCDTCAPGFY---GYPSCRPCDCHEAGTMASVCDPLTGQCHCKENVQGSRCD 1613
Query: 88 RCDVNHYDFGEAGCKSC 104
+C V + A K C
Sbjct: 1614 QCRVGTFSLDAANPKGC 1630
>gi|148675373|gb|EDL07320.1| mCG6728, isoform CRA_b [Mus musculus]
Length = 3714
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ DGP+C++C Y+ G C AC C+P G+L+ QC G C C+PG TG C
Sbjct: 613 CRPGFDGPHCDRCLPGYH---GYPDCHACACDPRGALDQQCGVGGLCHCRPGYTGATCQE 669
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV---HTELRVQSR 145
C Y F C C C+ GS+ T CD GQC R RV H ++ V
Sbjct: 670 CSPGFYGF--PSCIPCHCSADGSLHTT--CDPTTGQCR-----CRPRVTGLHCDMCVPGA 720
Query: 146 KNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD 204
NF C+ + +P G + ++ C C+ V G CDRC ++
Sbjct: 721 YNFP----------YCEAGSCHPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGYWG 770
Query: 205 FGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ GC C C+P G++ C GQC CK +V G C +
Sbjct: 771 LSASNPEGCTRCSCDPRGTLGGVTECQG-NGQCFCKAHVCGKTCAA 815
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 93/232 (40%), Gaps = 56/232 (24%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G HC C GP+C C+ C+ G N C+ E G+C C+ G
Sbjct: 529 GAHCELCAPGFHGPSCHPCQ----------------CSSPGVANSLCDPESGQCMCRTGF 572
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
GD+CD C + ++ F C+ C C+PAG++ CD G+C
Sbjct: 573 EGDRCDHCALGYFHF--PLCQLCGCSPAGTLPE--GCDEA-GRC---------------- 611
Query: 142 VQSRKNFD--------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
Q R FD P + D C D G+L+ QC G C C+PG TG
Sbjct: 612 -QCRPGFDGPHCDRCLPGYHGYPDCHACACDPR-----GALDQQCGVGGLCHCRPGYTGA 665
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C Y F C C C+ GS+ T CD GQC C+ V G C
Sbjct: 666 TCQECSPGFYGF--PSCIPCHCSADGSLHTT--CDPTTGQCRCRPRVTGLHC 713
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 118/290 (40%), Gaps = 76/290 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G + C++D E+ R GG CLDCQ G NCE+C +++
Sbjct: 364 CNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQ 423
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-------- 98
+ C C+C + + GRC C+P TG+ C C + DF
Sbjct: 424 PLDSPHVCRPCDCESDFTDGTCEDLTGRCYCRPNFTGELCAACAEGYTDFPHCYPLPSFP 483
Query: 99 ----------AG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
AG +C+CN AG+ N D G+C + + RG H EL
Sbjct: 484 HNDTREQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRC-VCKPNFRG-AHCEL------- 534
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNSE-GRCQCKPGVTGDKC 195
C P HG G N C+ E G+C C+ G GD+C
Sbjct: 535 -------------CA----PGFHGPSCHPCQCSSPGVANSLCDPESGQCMCRTGFEGDRC 577
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D C + ++ F C+ C C+PAG++ CD G+C+C+ +G C
Sbjct: 578 DHCALGYFHF--PLCQLCGCSPAGTLPE--GCDEA-GRCQCRPGFDGPHC 622
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 109/262 (41%), Gaps = 42/262 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G C+ CQ + +G CE+CR + N C +C
Sbjct: 1865 CQCHGHSDRCLPGS---------GICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSC 1915
Query: 58 NCNPIGSLN-------LQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
C P+ + + N +C C+PG G C+RC + + C+ C+C+
Sbjct: 1916 PC-PLAVPSNNFADGCVLRNGRTQCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDCS 1974
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DT 165
G +CD + G C + G H E + F GN + C R D
Sbjct: 1975 GNGDPNMIFSDCDPLTGACRGCLRHTTGP-HCE---RCAPGF--YGNALLP-GNCTRCDC 2027
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
P G C+ + GRC CK GVTG +CDRC ++ F + GC+ C C PA
Sbjct: 2028 SPCG-----TETCDPQSGRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGS- 2081
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
C GQC C+ G QC
Sbjct: 2082 --ECHPQSGQCHCQPGTTGPQC 2101
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP+CE+C +Y + CT C+C
Sbjct: 1973 CSGNGDPNMIFSDCDPLT-----GACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRCDC 2027
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNC 118
+P G+ S GRC CK GVTG +CDRC ++ F + GC+ C C PA C
Sbjct: 2028 SPCGTETCDPQS-GRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGSE---C 2083
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCKRDTYPLGHGGSLNL 176
GQC H + + + A W L + C+R P GH
Sbjct: 2084 HPQSGQC-----------HCQPGTTGPQCLECAPG-YWGLPEKGCRRCQCPRGH------ 2125
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNH 202
C+ G C C PG++G++CD C H
Sbjct: 2126 -CDPHTGHCTCPPGLSGERCDTCSQQH 2151
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+P V G +CD C Y G C+ C+C+ AG++ + CD + GQC CK+NV+
Sbjct: 1553 GQCRCRPNVAGRRCDTCAPGFY--GYPSCRPCDCHEAGTMASV--CDPLTGQCHCKENVQ 1608
Query: 242 GAQC 245
G++C
Sbjct: 1609 GSRC 1612
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 92/232 (39%), Gaps = 44/232 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTA-----CNCNPIGSLNLQCNSE---GRCQCKPG 80
+G D P+C + + + A C+CN G+ C + GRC CKP
Sbjct: 467 AEGYTDFPHCYPLPSFPHNDTREQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRCVCKPN 526
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G C+ C F C C+C+ G + CD GQC
Sbjct: 527 FRGAHCELCAPG---FHGPSCHPCQCSSPGVANSL--CDPESGQC--------------- 566
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPL------GHGGSLNLQCNSEGRCQCKPGVTGDK 194
R F+ G+R D +PL G+L C+ GRCQC+PG G
Sbjct: 567 --MCRTGFE--GDRC-DHCALGYFHFPLCQLCGCSPAGTLPEGCDEAGRCQCRPGFDGPH 621
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CDRC ++ + + C +C C+P G++ C V G C C+ GA C+
Sbjct: 622 CDRCLPGYHGYPD--CHACACDPRGALDQ--QC-GVGGLCHCRPGYTGATCQ 668
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEGRCQCKPGVTGD 84
C+ +GP+C++C+ Y+ S N CT C+C+P G+L +C G+C CK V G
Sbjct: 752 CRAHVEGPSCDRCKPGYWGLSASNPEGCTRCSCDPRGTLGGVTECQGNGQCFCKAHVCGK 811
Query: 85 KCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
C C + A GC+SC C+ G++
Sbjct: 812 TCAACKDGFFGLDYADYFGCRSCRCDVGGAL 842
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG TG +C C ++ E GC+ C+C P G +CD G C C +
Sbjct: 2088 GQCHCQPGTTGPQCLECAPGYWGLPEKGCRRCQC-PRG------HCDPHTGHCTCPPGLS 2140
Query: 242 GAQC 245
G +C
Sbjct: 2141 GERC 2144
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C+ C +Y G C C+C+ G++ C+ G+C CK V G +CD
Sbjct: 1557 CRPNVAGRRCDTCAPGFY---GYPSCRPCDCHEAGTMASVCDPLTGQCHCKENVQGSRCD 1613
Query: 88 RCDVNHYDFGEAGCKSC 104
+C V + A K C
Sbjct: 1614 QCRVGTFSLDAANPKGC 1630
>gi|270014771|gb|EFA11219.1| hypothetical protein TcasGA2_TC005184 [Tribolium castaneum]
Length = 1755
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 120/262 (45%), Gaps = 36/262 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C+CNG ++ C G C++C+ + +G NCE+C D +Y + + D C C
Sbjct: 855 CDCNGHADIC---------DSKTGACINCKDNTEGHNCEQCVDGFYGDPRLNVDIPCRPC 905
Query: 58 NC--NPIG--SLNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCE 105
C +P S +C+ E C+C G +G +CD C N++ E C+ C+
Sbjct: 906 PCPGSPWSNHSYADRCSLEASTKDVICECHVGYSGSRCDVCSDNYFGNPEEPGGLCQPCD 965
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
CN + NCD G+C+ + G H E+ P R D C+
Sbjct: 966 CNDKIDILKPGNCDPHTGKCKQCLYDTTGD-HCEV-------CRPGFFRYSDDMMCEECV 1017
Query: 166 -YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKN 223
+PLG S S G+C C P VTG CD+C NH+ GC+ C C+P GS++
Sbjct: 1018 CHPLGTNSSAGPCDPSSGQCVCLPNVTGLNCDQCIANHWKIASGEGCEPCNCDPQGSLR- 1076
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
P C+ GQCEC+ G QC
Sbjct: 1077 -PQCNLFDGQCECRPGFGGRQC 1097
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 102/203 (50%), Gaps = 25/203 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ--CN-SEGRCQCK 78
H G C C D G +CE CR +++ S D C C C+P+G+ + C+ S G+C C
Sbjct: 981 HTGKCKQCLYDTTGDHCEVCRPGFFRYSDDMMCEECVCHPLGTNSSAGPCDPSSGQCVCL 1040
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG CD+C NH+ GC+ C C+P GS++ P C+ GQCE + GR
Sbjct: 1041 PNVTGLNCDQCIANHWKIASGEGCEPCNCDPQGSLR--PQCNLFDGQCE-CRPGFGGRQC 1097
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
E +R DP + R CK D GS +LQC+ G C+C PG+ G CD
Sbjct: 1098 NE--CVARFWGDPKV----ECRECKCDA-----RGSRSLQCDMRTGACKCLPGIGGYNCD 1146
Query: 197 RCDVNHYDFGEAGCKSCECNPAG 219
RCD + G+A EC P G
Sbjct: 1147 RCDRGY--LGQAP----ECIPCG 1163
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 107/260 (41%), Gaps = 80/260 (30%)
Query: 6 FSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACN 58
F C FD LY TG GG C CQ + GPNCE+C+ YY+ + C C+
Sbjct: 335 FETYCHFDAALYEATGRISGGVCDGCQHNTMGPNCEQCKPFYYRDPQRDIQDPEVCRPCD 394
Query: 59 CNPIGSL-NLQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCE 105
C+P GSL N C+S G C CK V G +CD C ++F E+ GC+SC
Sbjct: 395 CDPRGSLDNGICDSITDAENNLIAGSCHCKTNVEGRRCDICKNGFWNFTESNPDGCQSCT 454
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
CN G++ N C+ G+C CKR
Sbjct: 455 CNTFGTIDNQ-GCNVYNGECT----------------------------------CKR-- 477
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
Y G CN QC P G R GC+ C+C+P GS N
Sbjct: 478 YVTGR------DCN-----QCLPEYWGLSEKR----------DGCQPCDCDPGGSFDN-- 514
Query: 226 NCDSVKGQCECKDNVEGAQC 245
NCD + GQC C++++ G C
Sbjct: 515 NCDVITGQCLCREHMTGRTC 534
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 81/206 (39%), Gaps = 73/206 (35%)
Query: 45 YYQKSGD---NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAG 100
YY G N +C C+P GSL+ C+ G C CK V G +CD+C Y FG G
Sbjct: 746 YYSSIGAYIFNGAFSCQCDPTGSLSKLCDEYGGHCTCKLNVVGRRCDQCAPGTYGFGPEG 805
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC+CN G++ N C++ GQC +
Sbjct: 806 CKSCDCNSIGALDNF--CNATTGQC----------------------------------K 829
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
C+ +TY G +CD+C ++F C+ C+CN
Sbjct: 830 CRANTY-------------------------GRECDQCRTGFWNF--PNCQRCDCNGHAD 862
Query: 221 VKNTPNCDSVKGQC-ECKDNVEGAQC 245
+ CDS G C CKDN EG C
Sbjct: 863 I-----CDSKTGACINCKDNTEGHNC 883
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-QCKPGV 81
+C G C+ C DNY+ + C C+CN + N G+C QC
Sbjct: 933 ECHVGYSGSRCDVCSDNYFGNPEEPGGLCQPCDCNDKIDILKPGNCDPHTGKCKQCLYDT 992
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQC----ESAQLSSRGRV 136
TGD C+ C + + + C+ C C+P G+ + CD GQC L+ +
Sbjct: 993 TGDHCEVCRPGFFRYSDDMMCEECVCHPLGTNSSAGPCDPSSGQCVCLPNVTGLNCDQCI 1052
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
++ S + +P C D GSL QCN +G+C+C+PG G +C
Sbjct: 1053 ANHWKIASGEGCEP----------CNCDP-----QGSLRPQCNLFDGQCECRPGFGGRQC 1097
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C + + C+ C+C+ GS + CD G C+C + G C
Sbjct: 1098 NECVARFWGDPKVECRECKCDARGS--RSLQCDMRTGACKCLPGIGGYNC 1145
>gi|392354548|ref|XP_003751790.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-3 [Rattus
norvegicus]
Length = 3287
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 111/242 (45%), Gaps = 52/242 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G CL C+ +GP C+ CR Y C AC C+ GS + C+ E G+C+C PGVT
Sbjct: 503 GRCL-CRPGVEGPRCDSCRSGSYSFP---ICQACQCSTSGSYPVPCDPETGQCECLPGVT 558
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ DS G C+ +L V
Sbjct: 559 GRRCDRCLSGAYDFPYCQGSSSVCDPAGTM------DSSLGYCQ-----------CKLHV 601
Query: 143 QSRKNFDPA----GNRIWDLRR----------CKRDTYPLGHGGSLNLQCNSE-GRCQCK 187
S P WDL + C G G +C E G C CK
Sbjct: 602 TS-----PTCSVCKPLYWDLAKENPRGCSECQCHEAGTVSGIG-----ECGQEDGDCSCK 651
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
VTGD CD C ++ ++ GC+ C+C+ G++ T C G+C+C++++EG Q
Sbjct: 652 AHVTGDACDTCADGYFSLEKSNYFGCQGCQCDIGGAL--TTMCSGPSGECQCREHIEGKQ 709
Query: 245 CR 246
C+
Sbjct: 710 CQ 711
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 90/211 (42%), Gaps = 51/211 (24%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P G+ C+ EG +C C+P V G +C RC +Y F CK C C
Sbjct: 1260 NGAVPCECHPAGAAVHHCSPEGGQCPCRPNVIGRQCTRCATGYYGFPH--CKPCNCGRRL 1317
Query: 111 SVKNTPNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-----------GNRI 155
+ T C ++V+ QCE +++S NF P G
Sbjct: 1318 CEEVTGKCLCPPNTVRPQCEVCEMNSF-------------NFHPVAGCEVCNCSRKGTVE 1364
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
+ C RD+ G+C+CKP VTG +CD+C Y F E C C C
Sbjct: 1365 AAVSECDRDS----------------GQCRCKPRVTGQQCDKCAPGFYHFPE--CVPCSC 1406
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
N G+ CD G C CK+NVEG QC+
Sbjct: 1407 NRDGTEPGV--CDPGTGACMCKENVEGPQCQ 1435
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ YY + C C C
Sbjct: 1686 CNCNGHSNRC---------QDGSGVCINCQHNTAGEHCERCQEGYYGSAIHGSCRVCPCP 1736
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C +G RC CKPG TG +C+RC ++ FG C+ C CN G
Sbjct: 1737 HTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQFG 1795
Query: 114 NTPNCDSVKGQCESAQ 129
CD + G C S +
Sbjct: 1796 ---TCDPLTGDCVSQE 1808
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D+ + + GG C+DCQ + G NCEKC Y++ G
Sbjct: 352 CNCHGHAVDCYYDEAVSRQQASLNSKGVYTGGGVCIDCQHNTAGVNCEKCAKGYFRPHGV 411
Query: 52 NF-----CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF 96
C C+C+P +C+ GRC CKP +GD C+ C +Y+F
Sbjct: 412 PVEALHGCIPCSCDP--DRADECDQGSGRCHCKPNFSGDFCETCADGYYNF 460
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----EGRCQCKP 79
G CL C + P CE C N + C CNC+ G++ + G+C+CKP
Sbjct: 1323 GKCL-CPPNTVRPQCEVCEMNSFNFHPVAGCEVCNCSRKGTVEAAVSECDRDSGQCRCKP 1381
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C Y F E C C CN G+ CD G C
Sbjct: 1382 RVTGQQCDKCAPGFYHFPE--CVPCSCNRDGTEPGV--CDPGTGAC 1423
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 32/157 (20%)
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNT 115
C+P G+++ +S G CQCK VT C C ++D + GC C+C+ AG+V
Sbjct: 582 CDPAGTMD---SSLGYCQCKLHVTSPTCSVCKPLYWDLAKENPRGCSECQCHEAGTVSGI 638
Query: 116 PNCDSVKGQCE-SAQLS-------SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
C G C A ++ + G E + N+ + + C+ D
Sbjct: 639 GECGQEDGDCSCKAHVTGDACDTCADGYFSLE-----KSNY-------FGCQGCQCDI-- 684
Query: 168 LGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
GG+L C+ G CQC+ + G +C R + N Y
Sbjct: 685 ---GGALTTMCSGPSGECQCREHIEGKQCQRPESNCY 718
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G C+ C D Y+ N+ C C C+ G+L C+ G CQC+ + G +
Sbjct: 650 CKAHVTGDACDTCADGYFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGECQCREHIEGKQ 709
Query: 86 CDRCDVNHY 94
C R + N Y
Sbjct: 710 CQRPESNCY 718
>gi|395820049|ref|XP_003783390.1| PREDICTED: netrin-4 isoform 1 [Otolemur garnettii]
Length = 628
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 37/216 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC + ++ FG+ GC+ C+C
Sbjct: 392 CKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMMGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
AGS CD + G C L+S + + ++ W+ ++
Sbjct: 452 --AGS------CDPLTGDC----LTSSTDIDWYHEIPDFQSMHNKSETTWEWED-EQGFS 498
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
L H G+C+CK V G+ C + +
Sbjct: 499 ALRHS----------GKCECKEQVLGNAKAFCGMKY 524
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC + ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGPHCDRCMMGYWGFGDYGCRPCDC--AGS------CDPLTGDC 462
>gi|403257028|ref|XP_003921140.1| PREDICTED: laminin subunit beta-4 [Saimiri boliviensis boliviensis]
Length = 1761
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 106/217 (48%), Gaps = 34/217 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C+CNG S+RC FD+ Y +G GG C DCQ + +G +C +CR +Y+ S
Sbjct: 332 CSCNGHSSRCHFDRTAYVASGGLSGGVCEDCQHNTEGQHCHRCRPLFYRDPLKAISDPYA 391
Query: 54 CTACNCNPIGSLN-----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 99
C C C+P G+++ L+ + G+C CK V G KCD+C NHY
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALE-SVAGQCLCKENVKGAKCDQCKANHYGLSATDPL 450
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
GC+ C CNP GS+ + CD GQC LS H E + + GN +
Sbjct: 451 GCQPCNCNPLGSLPLS-TCDVDTGQCLC--LSYVTGAHCE---ECIVGYWGLGNHLHGCS 504
Query: 160 RCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKC 195
C D GG+ + C+ ++G+C+C+P VTG C
Sbjct: 505 PCDCDI-----GGAYSNVCSPTDGQCECRPHVTGRSC 536
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 109/267 (40%), Gaps = 41/267 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C G C +C+G G NCE+C D YY S C C C
Sbjct: 863 CPCNGFAELC---------DPQTGSCFNCRGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C +Y C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICSCLQGYTGTQCGECSTGYYGNPRISGVPCQPCACN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY- 166
V + +C V G+C ++ G T ++ + A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTHG---TNCQLCKSGYYGSALNQT--CRRCSCHASG 1028
Query: 167 ------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPA 218
P G G C+ G C C P VTG CDRC +++ GC+SC+C+P
Sbjct: 1029 VSPAECPPGGGACF---CDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPR 1085
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
S + +CD + GQC CK G +C
Sbjct: 1086 TS--QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 89/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ YY + + C C+C+ G +C G
Sbjct: 989 GECLRCLHNTHGTNCQLCKSGYYGSALNQTCRRCSCHASGVSPAECPPGGGACFCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C ++Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -RCSECQEDYYGEPPGQCIPCDCNKAGTQK--PICDPDTGMCRCREGVSGQRC 1158
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 107/279 (38%), Gaps = 91/279 (32%)
Query: 1 CNCNGFSNRC----FFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG------ 50
C CNG ++ C ++++ G CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECGPMQKVRGDVFSPPGMVHSQCVCQHNTDGPNCERCKD-FFQDAPWRPAAG 323
Query: 51 --DNFCTACNCN------------PIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY- 94
DN C +C+CN + S L S G C+ C+ G C RC Y
Sbjct: 324 FQDNACRSCSCNGHSSRCHFDRTAYVASGGL---SGGVCEDCQHNTEGQHCHRCRPLFYR 380
Query: 95 DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD 149
D +A C CEC+P G++ G C S + D
Sbjct: 381 DPLKAISDPYACIPCECDPDGTISG--------GICVS-------------------HSD 413
Query: 150 PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA- 208
PA + G+C CK V G KCD+C NHY
Sbjct: 414 PALESV-------------------------AGQCLCKENVKGAKCDQCKANHYGLSATD 448
Query: 209 --GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP GS+ + CD GQC C V GA C
Sbjct: 449 PLGCQPCNCNPLGSLPLS-TCDVDTGQCLCLSYVTGAHC 486
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 55 TACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
AC C+P GS+ C+ G +CQCKP V G CDRC Y G GC C C+P GS
Sbjct: 767 VACKCHPQGSVGPSCSRLGGQCQCKPLVVGRCCDRCSTGSYGLGHHGCHPCHCHPQGSKD 826
Query: 114 NTPNCDSVKGQC 125
C V GQC
Sbjct: 827 TV--CHRVTGQC 836
>gi|392334060|ref|XP_003753074.1| PREDICTED: laminin subunit alpha-3 [Rattus norvegicus]
Length = 3333
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 111/242 (45%), Gaps = 52/242 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G CL C+ +GP C+ CR Y C AC C+ GS + C+ E G+C+C PGVT
Sbjct: 503 GRCL-CRPGVEGPRCDSCRSGSYSFP---ICQACQCSTSGSYPVPCDPETGQCECLPGVT 558
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ DS G C+ +L V
Sbjct: 559 GRRCDRCLSGAYDFPYCQGSSSVCDPAGTM------DSSLGYCQ-----------CKLHV 601
Query: 143 QSRKNFDPA----GNRIWDLRR----------CKRDTYPLGHGGSLNLQCNSE-GRCQCK 187
S P WDL + C G G +C E G C CK
Sbjct: 602 TS-----PTCSVCKPLYWDLAKENPRGCSECQCHEAGTVSGIG-----ECGQEDGDCSCK 651
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
VTGD CD C ++ ++ GC+ C+C+ G++ T C G+C+C++++EG Q
Sbjct: 652 AHVTGDACDTCADGYFSLEKSNYFGCQGCQCDIGGAL--TTMCSGPSGECQCREHIEGKQ 709
Query: 245 CR 246
C+
Sbjct: 710 CQ 711
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 90/211 (42%), Gaps = 51/211 (24%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P G+ C+ EG +C C+P V G +C RC +Y F CK C C
Sbjct: 1260 NGAVPCECHPAGAAVHHCSPEGGQCPCRPNVIGRQCTRCATGYYGFPH--CKPCNCGRRL 1317
Query: 111 SVKNTPNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-----------GNRI 155
+ T C ++V+ QCE +++S NF P G
Sbjct: 1318 CEEVTGKCLCPPNTVRPQCEVCEMNSF-------------NFHPVAGCEVCNCSRKGTVE 1364
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
+ C RD+ G+C+CKP VTG +CD+C Y F E C C C
Sbjct: 1365 AAVSECDRDS----------------GQCRCKPRVTGQQCDKCAPGFYHFPE--CVPCSC 1406
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
N G+ CD G C CK+NVEG QC+
Sbjct: 1407 NRDGTEPGV--CDPGTGACMCKENVEGPQCQ 1435
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C++ YY + C C C
Sbjct: 1686 CNCNGHSNRC---------QDGSGVCINCQHNTAGEHCERCQEGYYGSAIHGSCRVCPCP 1736
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C +G RC CKPG TG +C+RC ++ FG C+ C CN G
Sbjct: 1737 HTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQFG 1795
Query: 114 NTPNCDSVKGQCESAQ 129
CD + G C S +
Sbjct: 1796 ---TCDPLTGDCVSQE 1808
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D+ + + GG C+DCQ + G NCEKC Y++ G
Sbjct: 352 CNCHGHAVDCYYDEAVSRQQASLNSKGVYTGGGVCIDCQHNTAGVNCEKCAKGYFRPHGV 411
Query: 52 NF-----CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF 96
C C+C+P +C+ GRC CKP +GD C+ C +Y+F
Sbjct: 412 PVEALHGCIPCSCDP--DRADECDQGSGRCHCKPNFSGDFCETCADGYYNF 460
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----EGRCQCKP 79
G CL C + P CE C N + C CNC+ G++ + G+C+CKP
Sbjct: 1323 GKCL-CPPNTVRPQCEVCEMNSFNFHPVAGCEVCNCSRKGTVEAAVSECDRDSGQCRCKP 1381
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C Y F E C C CN G+ CD G C
Sbjct: 1382 RVTGQQCDKCAPGFYHFPE--CVPCSCNRDGTEPGV--CDPGTGAC 1423
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 32/157 (20%)
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNT 115
C+P G+++ +S G CQCK VT C C ++D + GC C+C+ AG+V
Sbjct: 582 CDPAGTMD---SSLGYCQCKLHVTSPTCSVCKPLYWDLAKENPRGCSECQCHEAGTVSGI 638
Query: 116 PNCDSVKGQCE-SAQLS-------SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
C G C A ++ + G E + N+ + + C+ D
Sbjct: 639 GECGQEDGDCSCKAHVTGDACDTCADGYFSLE-----KSNY-------FGCQGCQCDI-- 684
Query: 168 LGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
GG+L C+ G CQC+ + G +C R + N Y
Sbjct: 685 ---GGALTTMCSGPSGECQCREHIEGKQCQRPESNCY 718
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G C+ C D Y+ N+ C C C+ G+L C+ G CQC+ + G +
Sbjct: 650 CKAHVTGDACDTCADGYFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGECQCREHIEGKQ 709
Query: 86 CDRCDVNHY 94
C R + N Y
Sbjct: 710 CQRPESNCY 718
>gi|260797342|ref|XP_002593662.1| hypothetical protein BRAFLDRAFT_131954 [Branchiostoma floridae]
gi|229278889|gb|EEN49673.1| hypothetical protein BRAFLDRAFT_131954 [Branchiostoma floridae]
Length = 2475
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 120/263 (45%), Gaps = 70/263 (26%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGS------LNL------ 67
G CL C G+ G CE+C + Y+ GD C C C+P GS LN
Sbjct: 350 GECLKCIGNTVGDECERCANGYF---GDAINAKNCQRCLCHPRGSYQEDCDLNTGQCRCR 406
Query: 68 -----------QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV--KN 114
C+ +G+C+CKPGV G +CDRC+V Y F E GCK+C+C+ G
Sbjct: 407 PNVIGRDCDQCACDEDGQCRCKPGVGGQQCDRCEVGFYGFSEDGCKACDCSSTGGFCDDQ 466
Query: 115 TPNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD-LRRCKR-DTYPL 168
T +C ++V +CES + + G WD L C D P+
Sbjct: 467 TGDCICPPNTVGIRCESCRPETFG---------------------WDGLNGCTPCDCDPV 505
Query: 169 GHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G G+ C+ + G+C+C +G +C+ C ++DF C+ C CN AG+ NT N
Sbjct: 506 GSEGN---DCDLTTGQCRCLDDFSGRQCNMCQFGYFDF--PTCRECTCNQAGTDPNTCNA 560
Query: 228 DSV-----KGQCECKDNVEGAQC 245
+ V G C CK NVEG C
Sbjct: 561 NDVCACADNGTCSCKPNVEGKSC 583
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 115/287 (40%), Gaps = 67/287 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG + C G CL C + G NCE C YY + + C+ C
Sbjct: 224 CQCNGHAEEC---------DDVTGTCLSCLHNTAGRNCEVCAPGYYGDATRGTPDDCSRC 274
Query: 58 NCNPIGSLNLQCNSEGRC----------QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C + S N N C +C PG G +C++C ++ + E G CK C
Sbjct: 275 ACPLVESSN---NFSPTCVAMDGGVFCDRCPPGHEGFQCEKCADGYFGNPLEVGNVCKQC 331
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR- 163
CN + NCD++ G+C ++ G E + F A N + C+R
Sbjct: 332 ICNGNIDPTDEGNCDAITGECLKCIGNTVG---DECERCANGYFGDAINA----KNCQRC 384
Query: 164 DTYPLGHGGSLNLQCN-SEGRCQCKPGVT----------------------GDKCDRCDV 200
+P GS C+ + G+C+C+P V G +CDRC+V
Sbjct: 385 LCHP---RGSYQEDCDLNTGQCRCRPNVIGRDCDQCACDEDGQCRCKPGVGGQQCDRCEV 441
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
Y F E GCK+C+C+ G CD G C C N G +C S
Sbjct: 442 GFYGFSEDGCKACDCSSTGGF-----CDDQTGDCICPPNTVGIRCES 483
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 30 QGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
Q D +C YY C C C+ GSL+ C+ G CQC+PG+TG C
Sbjct: 969 QNDEVASQYSRCEQGYYGNPTIPGGRCYECACDQSGSLSPICDQVTGACQCQPGITGRAC 1028
Query: 87 DRCDVNHYDFGEAGCKSCE 105
D+C Y E GC +C+
Sbjct: 1029 DQCQ-PRYALTERGCINCD 1046
>gi|380019683|ref|XP_003693732.1| PREDICTED: laminin subunit alpha-like [Apis florea]
Length = 3670
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 105/238 (44%), Gaps = 48/238 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C++C YY C ACNC+ GS+ C++EG+CQC+ G +C++
Sbjct: 603 CLANFAGRTCDQCSPGYYMYPE---CIACNCDSHGSIGASCDTEGKCQCRENFDGARCNQ 659
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQS 144
C Y+F C+ C C+PAG V+ C S+ QC+ GR+ E +
Sbjct: 660 CKEGFYNF--PTCEGCNCDPAGIVETFQGCGSLPAGELCQCKD---RVEGRICNECK--- 711
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------------SEGRCQCKPGVT 191
W+L+ P G QCN G+C CKPGVT
Sbjct: 712 --------PLYWNLQ-------PYNPQGCEECQCNIPGVIGNIGECDTKSGQCICKPGVT 756
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C++C Y+ E+ GC C C+ GSV P CD GQC+C+ V G C+
Sbjct: 757 DRSCNQCVDGTYNLEESNFFGCTDCACDIGGSVN--PICDKQTGQCQCQPRVTGLTCK 812
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
+ G C C+ + G C++C DNYY + C AC+C I S + QC+ G+C CKPG
Sbjct: 1963 YTGQCF-CRENVVGEQCDRCADNYYGYDTCDGCKACDCG-IASESSQCDDMTGQCLCKPG 2020
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C ++++G GC SCECN SV + C++ GQC
Sbjct: 2021 VTGRRCDQCISGYWNYGPDGCTSCECNIGYSVGVS--CNTTTGQC 2063
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 114/262 (43%), Gaps = 41/262 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG ++ C + G CLDC+ G +CE C YY + C C
Sbjct: 1789 CECNGHADTCDVNT---------GICLDCKDGTTGDHCEFCEQGYYGNATGGSPTDCLIC 1839
Query: 58 NCN-PIGSLNL----QCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCE 105
C P+ S N Q N EG C C PG G +C+ C +Y +GE CK CE
Sbjct: 1840 ACPLPVPSNNFATGCQVNEEGNKISCDCLPGYYGARCESCASGYYGNPETYGEY-CKPCE 1898
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ +CDS G+C ++ G + + F A R D R C
Sbjct: 1899 CSGNIDTNQVGSCDSRTGECLRCLNNTYGEA---CNLCAPGFFGDAIER-KDCRNCLCKE 1954
Query: 166 YPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
+ H C+S G+C C+ V G++CDRC N+Y + GCK+C+C G
Sbjct: 1955 CGMEH-------CDSYTGQCFCRENVVGEQCDRCADNYYGYDTCDGCKACDC---GIASE 2004
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CD + GQC CK V G +C
Sbjct: 2005 SSQCDDMTGQCLCKPGVTGRRC 2026
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CKPGVTG +CD+C ++++G GC SCECN SV + C++ GQC C V
Sbjct: 2013 GQCLCKPGVTGRRCDQCISGYWNYGPDGCTSCECNIGYSVGVS--CNTTTGQCSCLPGVI 2070
Query: 242 GAQC 245
G +C
Sbjct: 2071 GEKC 2074
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 53/223 (23%)
Query: 41 CRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
CRD+ + + + N CNC+ G+++ +C G +C CKP + G +C+ C + Y F
Sbjct: 1345 CRDSIFSLTANYNNRALPCNCDINGAVSFECEKFGGQCLCKPNIIGRRCEICKMGFYGF- 1403
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
C+ C C P+ ++ C+ G C Q RV ++
Sbjct: 1404 -PNCEPCNC-PSRAL-----CEPKTGACICPQ-----------RVTGKR----------- 1434
Query: 158 LRRCKRDTY--------------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 202
+C+ TY PLG +LQC+ G C+CK V G +CDRC +
Sbjct: 1435 CDQCEVGTYGFHPILGCEECNCSPLGVIDG-DLQCDFFNGSCRCKENVVGRQCDRCRPGY 1493
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F C+ C+C+ G+ + CD +C CK+NV+G C
Sbjct: 1494 SQFPH--CEKCDCDIRGTTEEI--CDQYTAECYCKENVQGLAC 1532
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 117/313 (37%), Gaps = 98/313 (31%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC G S+ C +D E +++ GG C +C+ + +G NC +C+ +Y+
Sbjct: 330 CNCFGHSDECEYDPEVDEKHLSLDIHDNYEGGGVCKNCRDNTEGINCNRCKPTFYRPGDK 389
Query: 49 --SGDNFCTACNCNPIGSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDF------- 96
+ + C C CN + NL N G+C+C+ T CD C HY +
Sbjct: 390 PLNATDVCQPCQCN---APNLTGNCADITGKCECRKEYTSPNCDSCSFGHYGYPNCVPCQ 446
Query: 97 ----GEAG---------------------------------CKSCECNPAGSVKNTPNCD 119
G G C CECNP GS ++ CD
Sbjct: 447 CFSNGTDGDHCEAIDGSCPCKLNYAGHFCNLCAQGYYKFPECLPCECNPLGS--HSAECD 504
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL-------GHGG 172
+ G C + N+ G R D+ YPL G
Sbjct: 505 VISGNC-----------------ICKNNY---GGRTCDICENGYYNYPLCTFCNCDSRGT 544
Query: 173 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
+ S+G C CK G G +CD+C +Y G C+ C C + ++ +CD++ G
Sbjct: 545 EAEICDKSDGTCLCKKGYGGPRCDQCISGYY--GYPNCRPCNC--SSIGSSSISCDAI-G 599
Query: 233 QCECKDNVEGAQC 245
+C C N G C
Sbjct: 600 KCSCLANFAGRTC 612
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL-----QCNSEGRCQCKPGV 81
C+ + DG C +C++ +Y NF C CNC+P G + + CQCK V
Sbjct: 648 CRENFDGARCNQCKEGFY-----NFPTCEGCNCDPAGIVETFQGCGSLPAGELCQCKDRV 702
Query: 82 TGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G C+ C +++ + GC+ C+CN G + N CD+ GQC + G
Sbjct: 703 EGRICNECKPLYWNLQPYNPQGCEECQCNIPGVIGNIGECDTKSGQC----ICKPGVTDR 758
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
++ + + C D GGS+N C+ + G+CQC+P VTG C
Sbjct: 759 SCNQCVDGTYNLEESNFFGCTDCACDI-----GGSVNPICDKQTGQCQCQPRVTGLTCKE 813
Query: 198 CDVNHY 203
HY
Sbjct: 814 PLKAHY 819
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C ++ GD C C C G C+S G+C C+
Sbjct: 1916 GECLRCLNNTYGEACNLCAPGFF---GDAIERKDCRNCLCKECGME--HCDSYTGQCFCR 1970
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G++CDRC N+Y + GCK+C+C G + CD + GQC + GR
Sbjct: 1971 ENVVGEQCDRCADNYYGYDTCDGCKACDC---GIASESSQCDDMTGQC-LCKPGVTGR-R 2025
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ + N+ P G C+ + G S+ + CN+ G+C C PGV G+KCD
Sbjct: 2026 CDQCISGYWNYGPDG-----CTSCECNI-----GYSVGVSCNTTTGQCSCLPGVIGEKCD 2075
Query: 197 RCDVNHYDFGEAGCKSCE 214
C + GC +C+
Sbjct: 2076 HCPYRNVLIPGQGCFACD 2093
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 105/289 (36%), Gaps = 82/289 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK------SGDNF- 53
C CNG ++ C L +T C CQ + GP C C + QK + F
Sbjct: 271 CMCNGHADTC---DILDPKTPKKLFC-RCQHNTCGPQCATCCKGFEQKKWRQSTAFKKFT 326
Query: 54 CTACNC--------------NPIGSLNLQCNSEGRCQCK---PGVTGDKCDRCDVNHYDF 96
C CNC SL++ N EG CK G C+RC Y
Sbjct: 327 CEPCNCFGHSDECEYDPEVDEKHLSLDIHDNYEGGGVCKNCRDNTEGINCNRCKPTFYRP 386
Query: 97 GEAG------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
G+ C+ C+CN T NC + G+CE RK +
Sbjct: 387 GDKPLNATDVCQPCQCNAPNL---TGNCADITGKCE-----------------CRKEYTS 426
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLN---LQCNS-----------EGRCQCKPGVTGDKCD 196
C D+ GH G N QC S +G C CK G C+
Sbjct: 427 P--------NC--DSCSFGHYGYPNCVPCQCFSNGTDGDHCEAIDGSCPCKLNYAGHFCN 476
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +Y F E C CECNP GS ++ CD + G C CK+N G C
Sbjct: 477 LCAQGYYKFPE--CLPCECNPLGS--HSAECDVISGNCICKNNYGGRTC 521
>gi|341941025|sp|P02469.3|LAMB1_MOUSE RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin B1
chain; AltName: Full=Laminin-1 subunit beta; AltName:
Full=Laminin-10 subunit beta; AltName: Full=Laminin-12
subunit beta; AltName: Full=Laminin-2 subunit beta;
AltName: Full=Laminin-6 subunit beta; AltName:
Full=Laminin-8 subunit beta; Flags: Precursor
Length = 1786
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 335 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 394
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G++CD C YD G
Sbjct: 395 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R Q N + R
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-----QCLPQHWGLSNDLDGCRP 509
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 510 CDCDL-----GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 548
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 109/292 (37%), Gaps = 80/292 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------------------QKSGDNFCTACNCNPIGS 64
G CL CQ G NCE+C YY SG F +C +P+ +
Sbjct: 881 GECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPV-T 939
Query: 65 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDS 120
L L C C PG G +CD C + DFG C+ C+C+ + CD
Sbjct: 940 LQLA------CVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDK 992
Query: 121 VKGQC---------ESAQLSSRGRVHTELRVQSRK---NF---------------DPAG- 152
G+C + QL G LR RK N+ D A
Sbjct: 993 ETGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVKEHCNGSDCHCDKATG 1052
Query: 153 ------NRI-WDLRRCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCKPGVTGD 193
N I + RC +T+ L G S CN G+CQC PG G
Sbjct: 1053 QCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCNCNAAHSFGPSCNEFTGQCQCMPGFGGR 1112
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1113 TCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1162
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK C+C+ GS + CD++ GQC
Sbjct: 810 TFGFGPNGCKPCDCHLQGSA--SAFCDAITGQC 840
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GS + CD++
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSA--SAFCDAI 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 837 TGQCHCFQGIYARQC 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 30/238 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS + C++ G+C C G+
Sbjct: 789 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPNGCKPCDCHLQGSASAFCDAITGQCHCFQGI 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CD+V G+C S Q + G H R
Sbjct: 847 YARQCDRCLPGYWGF--PSCQPCQCN-----GHALDCDTVTGECLSCQDYTTG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQL----ACVCDPGYIGS 953
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + DFG C+ C+C+ + CD G+C +C + EG C+
Sbjct: 954 RCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQ 1010
>gi|432094058|gb|ELK25850.1| Laminin subunit alpha-5 [Myotis davidii]
Length = 3259
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 108/241 (44%), Gaps = 48/241 (19%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GHCL C+ + DGP+C++CR ++ G C AC+C+P G+L+ C+ G C+C+PG
Sbjct: 537 AGHCL-CRPEFDGPHCDRCRPGHH---GYPDCRACDCDPQGALDQLCSVGGVCRCRPGFA 592
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 593 GATCRECSPGFHGF--PTCAPCHCSAHGSLDAA--CDPRSGQC-----SCRPRV-TGLRC 642
Query: 142 ---VQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGS---LNLQCNSEGRCQCK 187
V NF DP G LG ++L+ G+C CK
Sbjct: 643 DTCVPGTYNFPYCEGCNCDPRGT--------------LGGAAECELVSLRAEGNGQCFCK 688
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
P V G C C + G+A GC+SC C+ G++ C+ G C C+ N G
Sbjct: 689 PRVCGQACAVCKDGFFGLGQAGYFGCRSCRCDVGGALGQ--GCEPRTGACRCRPNTHGPT 746
Query: 245 C 245
C
Sbjct: 747 C 747
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 100/239 (41%), Gaps = 55/239 (23%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSG---DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDK 85
C+ G C++C Y+ + C C+ G+L C+ G C C+P G
Sbjct: 491 CRAGFQGATCDRCAPGYFHFPLCQCEQGLPMCGCSTAGTLPQGCDEAGHCLCRPEFDGPH 550
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CDRC H+ + + C++C+C+P G++ C SV G C + R
Sbjct: 551 CDRCRPGHHGYPD--CRACDCDPQGALDQL--C-SVGGVC-----------------RCR 588
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHG------------GSLNLQCNS-EGRCQCKPGVTG 192
F A C R+ P HG GSL+ C+ G+C C+P VTG
Sbjct: 589 PGFAGA--------TC-RECSPGFHGFPTCAPCHCSAHGSLDAACDPRSGQCSCRPRVTG 639
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK------GQCECKDNVEGAQC 245
+CD C Y+F C+ C C+P G++ C+ V GQC CK V G C
Sbjct: 640 LRCDTCVPGTYNF--PYCEGCNCDPRGTLGGAAECELVSLRAEGNGQCFCKPRVCGQAC 696
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 99/264 (37%), Gaps = 70/264 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D E+ GG C+ CQ G NCE+C +Y+
Sbjct: 288 CNCHGHADDCYYDPEVDRHNASQNQDSVYQGGGVCIACQHHTTGINCERCLPGFYRDPDQ 347
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C CNC + + GRC C+P G++C+ C
Sbjct: 348 PLDSPHTCRRCNCESNFTDGTCEDLTGRCYCRPSFAGERCEAC----------------- 390
Query: 107 NPAGSVKNTPNCDSVKGQCES--AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
A + P+C SV S AQ+ G++ + C +
Sbjct: 391 --AAGLTGFPHCYSVSAPRNSSVAQVQQAGQIVS----------------------CDCN 426
Query: 165 TYPLGHGGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
GG+ N C + GRC CKP G C+ C Y C C+C+ G V
Sbjct: 427 A-----GGTQNNACQKDPQLGRCLCKPNFQGIYCELCAPGFYG---QDCHPCQCSSPGVV 478
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+CD GQC C+ +GA C
Sbjct: 479 DG--DCDRDSGQCTCRAGFQGATC 500
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 87/206 (42%), Gaps = 41/206 (19%)
Query: 54 CTACNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
+C+CN G+ N C + GRC CKP G C+ C Y C C+C+ G
Sbjct: 420 IVSCDCNAGGTQNNACQKDPQLGRCLCKPNFQGIYCELCAPGFYG---QDCHPCQCSSPG 476
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-------GNRIWDLRRCKR 163
V +CD GQC R F A G + L +C++
Sbjct: 477 VVDG--DCDRDSGQCTC-----------------RAGFQGATCDRCAPGYFHFPLCQCEQ 517
Query: 164 DTYPL---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
P+ G+L C+ G C C+P G CDRC H+ + + C++C+C+P G+
Sbjct: 518 G-LPMCGCSTAGTLPQGCDEAGHCLCRPEFDGPHCDRCRPGHHGYPD--CRACDCDPQGA 574
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQCR 246
+ C SV G C C+ GA CR
Sbjct: 575 LDQL--C-SVGGVCRCRPGFAGATCR 597
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 86/217 (39%), Gaps = 47/217 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+ C G C+DCQ + +G +CE+C+ + + ++ C +C
Sbjct: 1571 CQCHGHSDLCIPGV---------GTCMDCQHNTEGDHCERCQAGFVRIGTEDPAAPCVSC 1621
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKN 114
C P+ +++ +C CKPG G C+RC + + C+ C C+ G
Sbjct: 1622 PC-PVSPVDI-IGGRPQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCNCSGNGDPNM 1679
Query: 115 T-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PLGHG 171
+CD + G C S + G H E C Y L G
Sbjct: 1680 IFKDCDPLTGACHSCLRHTTGP-HCE--------------------TCAPGFYGNALLPG 1718
Query: 172 GSLNLQCNS------EGRCQCKPGVTGDKCDRCDVNH 202
QC GRC C PG++G++CD C H
Sbjct: 1719 NCTRCQCQEGHCDVHTGRCTCPPGLSGERCDTCSHQH 1755
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 15/64 (23%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+P V G C RC ++ F C+ CD + GQC CK+NV+
Sbjct: 1265 GQCPCRPHVIGRDCSRCATGYWGF--PSCRRV-------------CDPLTGQCHCKENVQ 1309
Query: 242 GAQC 245
G +C
Sbjct: 1310 GPRC 1313
>gi|301764429|ref|XP_002917635.1| PREDICTED: laminin subunit alpha-1-like [Ailuropoda melanoleuca]
Length = 3114
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 107/237 (45%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C+AC C+ GSL+ C+ E G C CK
Sbjct: 905 GECLKCIGNTDGAHCERCADGFY---GDAVTAKNCSACECHGKGSLSDVCHLETGLCDCK 961
Query: 79 PGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC C C+ +GSV + +C + GR H
Sbjct: 962 PHVTGRQCDQCLPGYYGLDAGLGCLPCNCSTSGSVSD--DC------------TQEGRCH 1007
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
V K RC R Y GG C+ E G C C P
Sbjct: 1008 CVPGVAGEK-----------CDRCARGFYAYEDGGCTPCDCAHTQHTCHPESGECICPPH 1056
Query: 190 VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G CD C+ ++ E GC++C C+ GS + P CD++ G C+CK G C
Sbjct: 1057 TRGAACDECEDGYWGHDLELGCQACNCSGVGSAR--PGCDALTGHCQCKPGFGGPNC 1111
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + N+ GG C++C + G NCE C D YY+
Sbjct: 364 CNCHNKAQDCYYDENVANQRRSLNVAGQFRGGGVCINCLQNTMGINCETCIDGYYRPYKV 423
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
DN C C+C+P GSL+ C + G+C CK G G+KCDRC +
Sbjct: 424 SPYEDNPCRPCDCDPFGSLSSVCIKDELQSGLHKGKQPGQCPCKEGYAGEKCDRCQFGYK 483
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
+ C CEC+ AGSV P
Sbjct: 484 AY--PACVRCECSRAGSVNEDP 503
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C G C++C D Y+ + C ACNC+ +GS C++ G CQCKPG
Sbjct: 1049 GECI-CPPHTRGAACDECEDGYWGHDLELGCQACNCSGVGSARPGCDALTGHCQCKPGFG 1107
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
G C +C + + F + C +C+C+ G+ +T CD +G C A+
Sbjct: 1108 GPNCHQCSLGYRGFPD--CVACDCDLRGTSADT--CDEERGLCSCAE 1150
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 103/251 (41%), Gaps = 54/251 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSL--------NLQCNSE 72
G C C+ + G +CE+C +Y + C C C P+ + +L+ E
Sbjct: 792 GVCFACEHNTTGDHCEQCAPGFYGLPSRGTPGDCQRCAC-PLSTASNNFSPTCHLEDGDE 850
Query: 73 GRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C QC PG +G C+RC +Y C C+C+ +CDSV G+C
Sbjct: 851 VVCDQCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPFEEGHCDSVTGECLKC 910
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-----------HG-GSLNL 176
++ G H E RC Y HG GSL+
Sbjct: 911 IGNTDG-AHCE--------------------RCADGFYGDAVTAKNCSACECHGKGSLSD 949
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
C+ E G C CKP VTG +CD+C +Y GC C C+ +GSV + +C +G+C
Sbjct: 950 VCHLETGLCDCKPHVTGRQCDQCLPGYYGLDAGLGCLPCNCSTSGSVSD--DCTQ-EGRC 1006
Query: 235 ECKDNVEGAQC 245
C V G +C
Sbjct: 1007 HCVPGVAGEKC 1017
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 34 DGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCD 90
+G CE+C Y+ ++ C C+C+P GS++ C+ G+C C+PG TG +C+ C+
Sbjct: 1521 EGQYCERCSSGYHGNPRAPGGTCQRCDCSPRGSVHGDCDRRSGQCVCRPGATGLRCEECE 1580
Query: 91 VNHYDFGEAGCKSCECNPAGSVKN 114
H E+ C SC+ G + N
Sbjct: 1581 PRHILL-ESDCVSCDDECVGVLLN 1603
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 16/115 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNC---NPIGSLNLQCNSEG----R 74
G CLDC+ G +C+ C YY K + C+ C C +P S + C EG R
Sbjct: 1454 GKCLDCRHSTAGDHCDVCAPGYYGKVTGSPSDCSPCACPRSHP-ASFSPTCVLEGDADFR 1512
Query: 75 C-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C G G C+RC ++ A C+ C+C+P GSV +CD GQC
Sbjct: 1513 CDACILGYEGQYCERCSSGYHGNPRAPGGTCQRCDCSPRGSVHG--DCDRRSGQC 1565
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 167 PLGHGGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPA 218
P H S + C EG RC C G G C+RC ++ A C+ C+C+P
Sbjct: 1492 PRSHPASFSPTCVLEGDADFRCDACILGYEGQYCERCSSGYHGNPRAPGGTCQRCDCSPR 1551
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GSV +CD GQC C+ G +C
Sbjct: 1552 GSVHG--DCDRRSGQCVCRPGATGLRC 1576
>gi|307167492|gb|EFN61065.1| Laminin subunit alpha [Camponotus floridanus]
Length = 3660
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 110/233 (47%), Gaps = 38/233 (16%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C +C YY+ C ACNC+ GS+ + C+SEG+CQC+ G +C++
Sbjct: 602 CLTNFAGRTCNQCSPGYYKYPE---CIACNCDSHGSIGVSCDSEGKCQCRENFDGIRCEQ 658
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQS 144
C +Y+F C+ C C+PAG V C S+ QC + RV + Q
Sbjct: 659 CKEGYYNF--PTCEGCNCDPAGIVATFQGCGSLPPGELCQC-------KDRVEGRICNQC 709
Query: 145 RKNFDPAGNRIWDLRRCKRD-------TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ + W+L+ D P G GS+ +C+++ G+C CKPGVT C
Sbjct: 710 KPLY-------WNLQPYNPDGCEDCHCNIP-GVIGSIG-ECDTKTGQCICKPGVTDRGCS 760
Query: 197 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
RC Y+ E+ GC C C+ GSV CD GQC C+ V G C+
Sbjct: 761 RCIDGTYNLQESNLFGCSDCACDVGGSVNLI--CDKQTGQCPCQPRVTGITCK 811
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 91/197 (46%), Gaps = 27/197 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C ++ GD C +C C+ G + C+S G+C C+
Sbjct: 1917 GQCLQCLNNTYGEACNLCAPGFF---GDAVQRKDCRSCVCDECGMEH--CDSYSGQCFCQ 1971
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G++CDRC +HY F GC+ CEC PA + CD GQC+ GR
Sbjct: 1972 ENVIGEQCDRCAPDHYGFSACEGCRPCECGPASE---SSQCDEETGQCKCMP-GVTGR-R 2026
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ +Q N++ G C+ T G S+ + CN+ G+C C PGV G+KCD
Sbjct: 2027 CDQCIQGYWNYESDG-----CTSCECHT-----GYSVGVSCNTTTGQCTCLPGVIGEKCD 2076
Query: 197 RCDVNHYDFGEAGCKSC 213
C H GC SC
Sbjct: 2077 HCPYRHVLIPAQGCFSC 2093
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ G C++C YY G C CNC+ +GS + C+S G+C C G
Sbjct: 553 GACL-CKDGYGGARCDQCIPGYY---GYPNCRPCNCSSVGSSIISCDSAGKCSCLTNFAG 608
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C++C +Y + E C +C C+ GS+ + CDS +G+C Q
Sbjct: 609 RTCNQCSPGYYKYPE--CIACNCDSHGSIGVS--CDS-EGKC-----------------Q 646
Query: 144 SRKNFDPAGNRIWDLRRCKRDTY-----------PLGHGGSLNLQCNSEG---RCQCKPG 189
R+NFD G R +CK Y P G + C S CQCK
Sbjct: 647 CRENFD--GIR---CEQCKEGYYNFPTCEGCNCDPAGIVATFQ-GCGSLPPGELCQCKDR 700
Query: 190 VTGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
V G C++C +++ + GC+ C CN G + + CD+ GQC CK V
Sbjct: 701 VEGRICNQCKPLYWNLQPYNPDGCEDCHCNIPGVIGSIGECDTKTGQCICKPGV 754
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
+ G C CQ + G C++C ++Y S C C C P S + QC+ E G+C+C PG
Sbjct: 1964 YSGQCF-CQENVIGEQCDRCAPDHYGFSACEGCRPCECGP-ASESSQCDEETGQCKCMPG 2021
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C ++++ GC SCEC+ SV + C++ GQC
Sbjct: 2022 VTGRRCDQCIQGYWNYESDGCTSCECHTGYSVGVS--CNTTTGQC 2064
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 89/225 (39%), Gaps = 71/225 (31%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
GG C C+ + G CE CR +Y G C CNC P +L + NS GRC C P V
Sbjct: 1379 FGGQC-PCRPNIIGRRCEICRTGFY---GYPRCRPCNC-PTTAL-CEPNS-GRCICPPRV 1431
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
TG +CD+C++ Y F GC+ C C+P G + CD G C
Sbjct: 1432 TGLRCDQCELGTYGFHPIIGCEECNCSPMGVLDGDRQCDLFDGGC--------------- 1476
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
RCK + V G +CDRC
Sbjct: 1477 -------------------RCKEN-------------------------VVGRQCDRCRA 1492
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ F C+ C+C+ G+ + CD +C CK+NV+G+ C
Sbjct: 1493 GYSQFPH--CERCDCDSRGTTSDI--CDQYTAECFCKENVQGSAC 1533
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 100/245 (40%), Gaps = 63/245 (25%)
Query: 28 DCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSEGRC--------Q 76
DC G CE C YY + GD +C C C S N+ N G C Q
Sbjct: 1867 DCLPGYYGARCEACAAGYYGNPEVYGD-YCKLCEC----SGNIDTNQFGSCDSITGQCLQ 1921
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C G+ C+ C FG+A C+SC C+ G +CDS GQC +
Sbjct: 1922 CLNNTYGEACNLCAPGF--FGDAVQRKDCRSCVCDECG----MEHCDSYSGQCFCQE--- 1972
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTYPLGH----------GGSLNLQCNSE 181
N I + RC D Y S + QC+ E
Sbjct: 1973 --------------------NVIGEQCDRCAPDHYGFSACEGCRPCECGPASESSQCDEE 2012
Query: 182 -GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C+C PGVTG +CD+C ++++ GC SCEC+ SV + C++ GQC C V
Sbjct: 2013 TGQCKCMPGVTGRRCDQCIQGYWNYESDGCTSCECHTGYSVGVS--CNTTTGQCTCLPGV 2070
Query: 241 EGAQC 245
G +C
Sbjct: 2071 IGEKC 2075
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 85/200 (42%), Gaps = 53/200 (26%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQ-CNSEG---RCQCKPGV 81
C+ + DG CE+C++ YY NF C CNC+P G + Q C S CQCK V
Sbjct: 647 CRENFDGIRCEQCKEGYY-----NFPTCEGCNCDPAGIVATFQGCGSLPPGELCQCKDRV 701
Query: 82 TGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVH 137
G C++C +++ + GC+ C CN G + + CD+ GQC ++ RG
Sbjct: 702 EGRICNQCKPLYWNLQPYNPDGCEDCHCNIPGVIGSIGECDTKTGQCICKPGVTDRG--- 758
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-------------GGSLNLQCNSE-GR 183
RC TY L GGS+NL C+ + G+
Sbjct: 759 --------------------CSRCIDGTYNLQESNLFGCSDCACDVGGSVNLICDKQTGQ 798
Query: 184 CQCKPGVTGDKCDRCDVNHY 203
C C+P VTG C HY
Sbjct: 799 CPCQPRVTGITCKEPLKAHY 818
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 105/282 (37%), Gaps = 78/282 (27%)
Query: 29 CQGDRDGPNCEKCRDNYYQ-KSGD--NFCTACNCN------------------------- 60
C + G +CE+C YY+ KSG +C C CN
Sbjct: 1759 CPPNYQGLSCEECAPGYYRVKSGPYGGYCAPCQCNGHATICDVNTGICQNCKNGTTGDHC 1818
Query: 61 --------------------------PIGSLNL----QCNSEG---RCQCKPGVTGDKCD 87
P+ S N + N EG C C PG G +C+
Sbjct: 1819 EFCEQGYYGNATVGTPSDCLICACPLPVTSNNFATGCEVNDEGNKISCDCLPGYYGARCE 1878
Query: 88 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
C +Y E CK CEC+ +CDS+ GQC ++ G + +
Sbjct: 1879 ACAAGYYGNPEVYGDYCKLCECSGNIDTNQFGSCDSITGQCLQCLNNTYGEA---CNLCA 1935
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD 204
F A R D R C D + H S + QC C+ V G++CDRC +HY
Sbjct: 1936 PGFFGDAVQR-KDCRSCVCDECGMEHCDSYSGQCF------CQENVIGEQCDRCAPDHYG 1988
Query: 205 FGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F GC+ CEC PA + CD GQC+C V G +C
Sbjct: 1989 FSACEGCRPCECGPASE---SSQCDEETGQCKCMPGVTGRRC 2027
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 110/268 (41%), Gaps = 53/268 (19%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC G S+ C +D E+ + GG C +C+ + +G NC +C+ +Y+
Sbjct: 329 CNCFGHSDECSYDPEMDEKHLSLDIHGNYEGGGICQNCKHNTEGINCNRCKPRFYRPRDK 388
Query: 49 --SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ + C C+C+ S +S G+C+C+ CD C+ + FG C+ CEC
Sbjct: 389 PLNATDVCQPCDCDYFYSTGNCADSTGKCECRKEYAPPNCDSCNYGY--FGYPTCRPCEC 446
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ G+ + +C++ G C F+ AG+ C Y
Sbjct: 447 HLQGT--DGYHCEATDGYCPC-------------------RFNYAGHY---CNLCAEGYY 482
Query: 167 PL--------GHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
G++N C+ G C CK G CD C+ ++++ C C C+
Sbjct: 483 KFPDCLPCVCNLLGAMNGVCDVVSGNCTCKNNYGGRSCDICEDGYFNY--PLCTYCNCDA 540
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ C+ G C CKD GA+C
Sbjct: 541 RGTKPGI--CNKNDGACLCKDGYGGARC 566
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 77/191 (40%), Gaps = 18/191 (9%)
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF--GEAG--CKSCECNPAGSVKNTPNCDSV 121
N+ +S +CQC P G C+ C +Y G G C C+CN ++ CD
Sbjct: 1748 NVPASSIEQCQCPPNYQGLSCEECAPGYYRVKSGPYGGYCAPCQCNGHATI-----CDVN 1802
Query: 122 KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE 181
G C++ + + G H E Q G D C + + + N E
Sbjct: 1803 TGICQNCKNGTTGD-HCEFCEQGYYGNATVGTP-SDCLICACPLPVTSNNFATGCEVNDE 1860
Query: 182 G---RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC- 234
G C C PG G +C+ C +Y E CK CEC+ +CDS+ GQC
Sbjct: 1861 GNKISCDCLPGYYGARCEACAAGYYGNPEVYGDYCKLCECSGNIDTNQFGSCDSITGQCL 1920
Query: 235 ECKDNVEGAQC 245
+C +N G C
Sbjct: 1921 QCLNNTYGEAC 1931
>gi|426392399|ref|XP_004062540.1| PREDICTED: laminin subunit alpha-5-like, partial [Gorilla gorilla
gorilla]
Length = 2056
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 101/229 (44%), Gaps = 24/229 (10%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL C+ + GP+C++CR Y+ G C AC C+P G+L+ C G C+C+PG T
Sbjct: 493 AGRCL-CRPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGVGGLCRCRPGYT 548
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 549 GTACQECSSGFHSF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 598
Query: 143 QSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
D ++ C+ + +P G ++ C C+ V G CDRC
Sbjct: 599 ------DTCVPGAYNFPYCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDRCKPG 652
Query: 202 HYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ + GC C C+ G++ C GQC CK +V G C S
Sbjct: 653 FWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 701
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1755 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFVSSGEDPSTPCVSCP 1805
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1806 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1865
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1866 GDPNLLFSDCDPLTGACRGCLRHTAGPRCEICAPGFYGNALLPGN-------CTRCDCAP 1918
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 1919 CG-----TEACDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS--- 1970
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 1971 ECHPQSGQCHCRPGTVGPQCR 1991
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 96/259 (37%), Gaps = 60/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC G + C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 250 CNCYGHATDCYYDPEVDQRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPNH 309
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC + + GRC C+P +G++CD C F C
Sbjct: 310 PLDSPHVCRRCNCESDFTDGTCEDLTGRCYCRPNFSGERCDVCAEGFTGFP-------SC 362
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P S N +R+ PAG + D
Sbjct: 363 YPTPSSSN----------------------------DTREQVLPAGQIV------NCDCS 388
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G G+ + GRC CKP G C+ C Y GC+ C+C+ G +
Sbjct: 389 AAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVADD--R 443
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD G+C C+ EGA C
Sbjct: 444 CDPDTGRCRCRAGFEGATC 462
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 80/210 (38%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1862 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTAGPRCEICAPGFYGNALLPGNCTRCDC 1916
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 1917 APCGTEACDPHS-GHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---C 1972
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G QC
Sbjct: 1973 HPQSGQCHCR----------------------PGTVGPQCRECAPGYWGLPEQGCRRCQC 2010
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2011 PGGRCDPHTGRCNCPPGLSGERCDTCSQQH 2040
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1329 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1379
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1380 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1417
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1418 ECNCSGPGVQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1475
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
V CD + GQC CK+NV+G +C
Sbjct: 1476 VPGV--CDPLTGQCYCKENVQGPRC 1498
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 385 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 441
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL--- 168
+ CD G+C + R F+ A RC + PL
Sbjct: 442 D--RCDPDTGRC-----------------RCRAGFEGA-----TCDRCAPGYFHFPLCQL 477
Query: 169 ---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 478 CGCSPAGTLPEGCDEAGRCLCRPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALDQL- 534
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
V G C C+ G C+
Sbjct: 535 --CGVGGLCRCRPGYTGTACQ 553
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C CKP V G
Sbjct: 637 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 696
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 697 QACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 739
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C+C P G CD G+C C +
Sbjct: 1977 GQCHCRPGTVGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGRCNCPPGLS 2029
Query: 242 GAQC 245
G +C
Sbjct: 2030 GERC 2033
>gi|74181151|dbj|BAE27840.1| unnamed protein product [Mus musculus]
Length = 1834
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G++CD C YD G
Sbjct: 443 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYG 502
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R Q N + R
Sbjct: 503 CKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-----QCLPQHWGLSNDLDGCRP 557
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 558 CDCDL-----GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 596
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 109/292 (37%), Gaps = 80/292 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------------------QKSGDNFCTACNCNPIGS 64
G CL CQ G NCE+C YY SG F +C +P+ +
Sbjct: 929 GECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPV-T 987
Query: 65 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDS 120
L L C C PG G +CD C + DFG C+ C+C+ + CD
Sbjct: 988 LQLA------CVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDK 1040
Query: 121 VKGQC---------ESAQLSSRGRVHTELRVQSRK---NF---------------DPAG- 152
G+C + QL G LR RK N+ D A
Sbjct: 1041 ETGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVKEHCNGSDCHCDKATG 1100
Query: 153 ------NRI-WDLRRCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCKPGVTGD 193
N I + RC +T+ L G S CN G+CQC PG G
Sbjct: 1101 QCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCNCNAAHSFGPSCNEFTGQCQCMPGFGGR 1160
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1161 TCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1210
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 798 PMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 857
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK C+C+ GS + CD++ GQC
Sbjct: 858 TFGFGPNGCKPCDCHLQGSA--SAFCDAITGQC 888
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GS + CD++
Sbjct: 827 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSA--SAFCDAI 884
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 885 TGQCHCFQGIYARQC 899
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 50/248 (20%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS + C++ G+C C G+
Sbjct: 837 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPNGCKPCDCHLQGSASAFCDAITGQCHCFQGI 894
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CD+V G+C S Q + G H R
Sbjct: 895 YARQCDRCLPGYWGF--PSCQPCQCN-----GHALDCDTVTGECLSCQDYTTG--HNCER 945
Query: 142 VQSRKNFDP------------------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
+ DP +G + R C +D L +
Sbjct: 946 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQF--ARSCYQDPVTL------------QLA 991
Query: 184 CQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C C PG G +CD C + DFG C+ C+C+ + CD G+C +C
Sbjct: 992 CVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDKETGRCLKCLY 1050
Query: 239 NVEGAQCR 246
+ EG C+
Sbjct: 1051 HTEGDHCQ 1058
>gi|114326497|ref|NP_032508.2| laminin subunit beta-1 [Mus musculus]
Length = 1834
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G++CD C YD G
Sbjct: 443 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYG 502
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R Q N + R
Sbjct: 503 CKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-----QCLPQHWGLSNDLDGCRP 557
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 558 CDCDL-----GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 596
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 109/292 (37%), Gaps = 80/292 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------------------QKSGDNFCTACNCNPIGS 64
G CL CQ G NCE+C YY SG F +C +P+ +
Sbjct: 929 GECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPV-T 987
Query: 65 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDS 120
L L C C PG G +CD C + DFG C+ C+C+ + CD
Sbjct: 988 LQLA------CVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDK 1040
Query: 121 VKGQC---------ESAQLSSRGRVHTELRVQSRK---NF---------------DPAG- 152
G+C + QL G LR RK N+ D A
Sbjct: 1041 ETGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVKEHCNGSDCHCDKATG 1100
Query: 153 ------NRI-WDLRRCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCKPGVTGD 193
N I + RC +T+ L G S CN G+CQC PG G
Sbjct: 1101 QCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCNCNAAHSFGPSCNEFTGQCQCMPGFGGR 1160
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1161 TCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1210
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 798 PMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 857
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK C+C+ GS + CD++ GQC
Sbjct: 858 TFGFGPNGCKPCDCHLQGSA--SAFCDAITGQC 888
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GS + CD++
Sbjct: 827 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSA--SAFCDAI 884
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 885 TGQCHCFQGIYARQC 899
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 50/248 (20%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS + C++ G+C C G+
Sbjct: 837 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPNGCKPCDCHLQGSASAFCDAITGQCHCFQGI 894
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CD+V G+C S Q + G H R
Sbjct: 895 YARQCDRCLPGYWGF--PSCQPCQCN-----GHALDCDTVTGECLSCQDYTTG--HNCER 945
Query: 142 VQSRKNFDP------------------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
+ DP +G + R C +D L +
Sbjct: 946 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQF--ARSCYQDPVTL------------QLA 991
Query: 184 CQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C C PG G +CD C + DFG C+ C+C+ + CD G+C +C
Sbjct: 992 CVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDKETGRCLKCLY 1050
Query: 239 NVEGAQCR 246
+ EG C+
Sbjct: 1051 HTEGDHCQ 1058
>gi|326933772|ref|XP_003212973.1| PREDICTED: laminin subunit beta-3-like [Meleagris gallopavo]
Length = 1166
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG S C FD E+++ +G GG C DCQ + +G NCE+C+ NY++ +
Sbjct: 314 CNCNGHSASCHFDLEVFHASGGVSGGVCDDCQHNTEGNNCERCKTNYFRNQRQDLTHPEA 373
Query: 54 CTACNCNPIGSLNLQC--NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ G C CK V G++C C A GC+ C CN
Sbjct: 374 CQPCECDPDGTVPGSVCDPLSGHCVCKENVQGERCHLCKPGFAQLAYANPLGCRRCACNV 433
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G+ +N P CD G C V T+ + ++D A R R C+ +
Sbjct: 434 LGTRQNVP-CDDETGSCSCLP----NVVGTDCDQCAAGHWDMASGR--GCRPCECNP--- 483
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKC------DRCDVNHYDFGEAGCKSCECNPAGSV 221
GS + CN G+CQC+ G TG C C H+ GC C C+ G+
Sbjct: 484 --SGSHSTHCNQFTGQCQCREGFTGRTCSAAQQEQACPDRHFGDVRVGCTECNCDFQGT- 540
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
CD G+C C+ V G +C
Sbjct: 541 -EDVGCDKSTGRCLCRPGVTGPRC 563
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 125/281 (44%), Gaps = 47/281 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHG--------GHCLDCQGDRDGPNCEKCRDNY----YQK 48
C CNG ++RC ++L+ G G C +CQ + GPNC C Y +
Sbjct: 244 CFCNGHADRCIPSRDLHAMVSFGNCSLLQVHGRC-ECQHNTAGPNCGHCAALYNDRPWAP 302
Query: 49 SGDN---FCTACNCNPIGS---LNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY- 94
+ DN C CNCN + +L+ S G C C+ G+ C+RC N++
Sbjct: 303 AEDNDPHECQRCNCNGHSASCHFDLEVFHASGGVSGGVCDDCQHNTEGNNCERCKTNYFR 362
Query: 95 ----DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT-ELRVQSRKNF 148
D C+ CEC+P G+V + CD + G C + R H +
Sbjct: 363 NQRQDLTHPEACQPCECDPDGTVPGSV-CDPLSGHCVCKENVQGERCHLCKPGFAQLAYA 421
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE 207
+P G RRC + G N+ C+ E G C C P V G CD+C H+D
Sbjct: 422 NPLG-----CRRCACNVL----GTRQNVPCDDETGSCSCLPNVVGTDCDQCAAGHWDMAS 472
Query: 208 A-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
GC+ CECNP+GS ++ +C+ GQC+C++ G C +
Sbjct: 473 GRGCRPCECNPSGS--HSTHCNQFTGQCQCREGFTGRTCSA 511
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNH 93
CT CNC+ G+ ++ C+ S GRC C+PGVTG +CD+C +H
Sbjct: 530 CTECNCDFQGTEDVGCDKSTGRCLCRPGVTGPRCDQCQRDH 570
>gi|348539079|ref|XP_003457017.1| PREDICTED: laminin subunit beta-1-like [Oreochromis niloticus]
Length = 1797
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 110/265 (41%), Gaps = 79/265 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG S++C FD +Y TG+ GG C DC + G NCE C+ YYQ +
Sbjct: 335 CNCNGHSDQCHFDMAVYMATGNVSGGVCDDCLHNTMGRNCETCKPFYYQDPNRDIRDPRV 394
Query: 54 CTACNCNPIGSL-----NLQCNSE-----GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C AC+C+P+GSL + + E G+C+CK V G +CD C +Y + G
Sbjct: 395 CVACDCDPVGSLEGGVCDTHTDFEMGMIAGQCRCKVNVKGTRCDDCKEGYYGLSQNDPLG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C C+P G + CD + G C
Sbjct: 455 CQPCNCDPRGIIVMGAPCDQISGDCS---------------------------------- 480
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
CKR Y G CN QC P G D AGC+ C+C+ G+
Sbjct: 481 CKR--YVTGR------YCN-----QCLPEYWGLSNDL----------AGCRPCDCDFGGA 517
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
N C GQC+C+ ++ G QC
Sbjct: 518 FNN--RCMMETGQCDCRRHLIGRQC 540
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P GSL+ +C+ G +C+CKP V G +CD+C Y FG +GC +C+C+ GS+ +
Sbjct: 774 CECDPQGSLSGECDVVGGQCRCKPNVIGRRCDQCAPGTYGFGVSGCTACDCHSDGSLSH- 832
Query: 116 PNCDSVKGQCE 126
CD V GQC+
Sbjct: 833 -QCDPVTGQCQ 842
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 13/89 (14%)
Query: 168 LGHGGSLNLQCNSE-----------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
+ H G+L +C+ + G+C+CKP V G +CD+C Y FG +GC +C+C+
Sbjct: 766 IIHDGALPCECDPQGSLSGECDVVGGQCRCKPNVIGRRCDQCAPGTYGFGVSGCTACDCH 825
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS+ + CD V GQC+C+ G QC
Sbjct: 826 SDGSLSH--QCDPVTGQCQCRQGATGRQC 852
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G C+ C DGP+C +C++ YY + + C C C G+L C+ G C
Sbjct: 996 GECIKCLYHTDGPSCAQCQNGYYGNALAHDCRRCTCVTAGTLQSACSDGHCDCDRQTGAC 1055
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQC 125
C+ V G CD+C N+++FG+ GC+ C CN ++ + +C+ GQC
Sbjct: 1056 PCREHVVGHNCDQCAPNYWNFGQDRGCEPCNCNSQHALGS--HCNMFTGQC 1104
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C Y G + CTAC+C+ GSL+ QC+ G+CQC+ G
Sbjct: 790 GGQC-RCKPNVIGRRCDQCAPGTY-GFGVSGCTACDCHSDGSLSHQCDPVTGQCQCRQGA 847
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
TG +C C + F C C+CN + CD G+C + + G H R
Sbjct: 848 TGRQCSDCQPGQWGF--PSCTPCQCNGHADL-----CDPRTGECRGCRDFTAG--HLCER 898
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYP-LGHGGSLNLQCN---SEGRCQCKPGVTGDKCDR 197
+PA R C P + +L+ Q + + C CK G G +CD+
Sbjct: 899 CMDTFFGNPALGSGQHCRPCPCPNNPNSDNFNALSCQVDHTSDQIMCNCKQGYMGLRCDQ 958
Query: 198 CDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
C +Y E C CECN ++ +CD G+C +C + +G C
Sbjct: 959 CAPGYYGNPEQPGGQCFPCECNGNIDTQDPESCDPRTGECIKCLYHTDGPSC 1010
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
+L CN G+C C G G +C C++ H+ C C CNP G+ CD +
Sbjct: 1092 ALGSHCNMFTGQCHCHSGFGGKQCTECELFHWGDPREQCHECNCNPEGA--EISQCDRLT 1149
Query: 232 GQCECKDNVEGAQC 245
G CEC++ G QC
Sbjct: 1150 GACECREGATGLQC 1163
>gi|223462235|gb|AAI50810.1| Laminin B1 subunit 1 [Mus musculus]
Length = 1834
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G++CD C YD G
Sbjct: 443 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYG 502
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R Q N + R
Sbjct: 503 CKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-----QCLPQHWGLSNDLDGCRP 557
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 558 CDCDL-----GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 596
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 109/292 (37%), Gaps = 80/292 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------------------QKSGDNFCTACNCNPIGS 64
G CL CQ G NCE+C YY SG F +C +P+ +
Sbjct: 929 GECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPV-T 987
Query: 65 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDS 120
L L C C PG G +CD C + DFG C+ C+C+ + CD
Sbjct: 988 LQLA------CVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDK 1040
Query: 121 VKGQC---------ESAQLSSRGRVHTELRVQSRK---NF---------------DPAG- 152
G+C + QL G LR RK N+ D A
Sbjct: 1041 DTGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVKEHCNGSDCHCDKATG 1100
Query: 153 ------NRI-WDLRRCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCKPGVTGD 193
N I + RC +T+ L G S CN G+CQC PG G
Sbjct: 1101 QCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCNCNAAHSFGPSCNEFTGQCQCMPGFGGR 1160
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1161 TCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1210
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 798 PMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 857
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK C+C+ GS + CD++ GQC
Sbjct: 858 TFGFGPNGCKPCDCHLQGSA--SAFCDAITGQC 888
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GS + CD++
Sbjct: 827 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSA--SAFCDAI 884
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 885 TGQCHCFQGIYARQC 899
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 50/248 (20%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS + C++ G+C C G+
Sbjct: 837 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPNGCKPCDCHLQGSASAFCDAITGQCHCFQGI 894
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CD+V G+C S Q + G H R
Sbjct: 895 YARQCDRCLPGYWGF--PSCQPCQCN-----GHALDCDTVTGECLSCQDYTTG--HNCER 945
Query: 142 VQSRKNFDP------------------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
+ DP +G + R C +D L +
Sbjct: 946 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQF--ARSCYQDPVTL------------QLA 991
Query: 184 CQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C C PG G +CD C + DFG C+ C+C+ + CD G+C +C
Sbjct: 992 CVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDKDTGRCLKCLY 1050
Query: 239 NVEGAQCR 246
+ EG C+
Sbjct: 1051 HTEGDHCQ 1058
>gi|293690|gb|AAA39407.1| laminin B1 [Mus musculus]
Length = 1834
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G++CD C YD G
Sbjct: 443 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYG 502
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R Q N + R
Sbjct: 503 CKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-----QCLPQHWGLSNDLDGCRP 557
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 558 CDCDL-----GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 596
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 109/292 (37%), Gaps = 80/292 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------------------QKSGDNFCTACNCNPIGS 64
G CL CQ G NCE+C YY SG F +C +P+ +
Sbjct: 929 GECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPV-T 987
Query: 65 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDS 120
L L C C PG G +CD C + DFG C+ C+C+ + CD
Sbjct: 988 LQLA------CVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDK 1040
Query: 121 VKGQC---------ESAQLSSRGRVHTELRVQSRK---NF---------------DPAG- 152
G+C + QL G LR RK N+ D A
Sbjct: 1041 DTGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVKEHCNGSDCHCDKATG 1100
Query: 153 ------NRI-WDLRRCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCKPGVTGD 193
N I + RC +T+ L G S CN G+CQC PG G
Sbjct: 1101 QCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCNCNAAHSFGPSCNEFTGQCQCMPGFGGR 1160
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1161 TCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1210
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 798 PMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 857
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK C+C+ GS + CD++ GQC
Sbjct: 858 TFGFGPNGCKPCDCHLQGSA--SAFCDAITGQC 888
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GS + CD++
Sbjct: 827 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSA--SAFCDAI 884
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 885 TGQCHCFQGIYARQC 899
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 50/248 (20%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS + C++ G+C C G+
Sbjct: 837 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPNGCKPCDCHLQGSASAFCDAITGQCHCFQGI 894
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CD+V G+C S Q + G H R
Sbjct: 895 YARQCDRCLPGYWGF--PSCQPCQCN-----GHALDCDTVTGECLSCQDYTTG--HNCER 945
Query: 142 VQSRKNFDP------------------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
+ DP +G + R C +D L +
Sbjct: 946 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQF--ARSCYQDPVTL------------QLA 991
Query: 184 CQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C C PG G +CD C + DFG C+ C+C+ + CD G+C +C
Sbjct: 992 CVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDKDTGRCLKCLY 1050
Query: 239 NVEGAQCR 246
+ EG C+
Sbjct: 1051 HTEGDHCQ 1058
>gi|148704971|gb|EDL36918.1| laminin B1 subunit 1 [Mus musculus]
Length = 1849
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 398 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 457
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G++CD C YD G
Sbjct: 458 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYG 517
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R Q N + R
Sbjct: 518 CKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-----QCLPQHWGLSNDLDGCRP 572
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 573 CDCDL-----GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 611
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 109/292 (37%), Gaps = 80/292 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------------------QKSGDNFCTACNCNPIGS 64
G CL CQ G NCE+C YY SG F +C +P+ +
Sbjct: 944 GECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPV-T 1002
Query: 65 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDS 120
L L C C PG G +CD C + DFG C+ C+C+ + CD
Sbjct: 1003 LQLA------CVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDK 1055
Query: 121 VKGQC---------ESAQLSSRGRVHTELRVQSRK---NF---------------DPAG- 152
G+C + QL G LR RK N+ D A
Sbjct: 1056 ETGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVKEHCNGSDCHCDKATG 1115
Query: 153 ------NRI-WDLRRCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCKPGVTGD 193
N I + RC +T+ L G S CN G+CQC PG G
Sbjct: 1116 QCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCNCNAAHSFGPSCNEFTGQCQCMPGFGGR 1175
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1176 TCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1225
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 813 PMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 872
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK C+C+ GS + CD++ GQC
Sbjct: 873 TFGFGPNGCKPCDCHLQGSA--SAFCDAITGQC 903
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GS + CD++
Sbjct: 842 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSA--SAFCDAI 899
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 900 TGQCHCFQGIYARQC 914
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 50/248 (20%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS + C++ G+C C G+
Sbjct: 852 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPNGCKPCDCHLQGSASAFCDAITGQCHCFQGI 909
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CD+V G+C S Q + G H R
Sbjct: 910 YARQCDRCLPGYWGF--PSCQPCQCN-----GHALDCDTVTGECLSCQDYTTG--HNCER 960
Query: 142 VQSRKNFDP------------------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
+ DP +G + R C +D L +
Sbjct: 961 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQF--ARSCYQDPVTL------------QLA 1006
Query: 184 CQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C C PG G +CD C + DFG C+ C+C+ + CD G+C +C
Sbjct: 1007 CVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDKETGRCLKCLY 1065
Query: 239 NVEGAQCR 246
+ EG C+
Sbjct: 1066 HTEGDHCQ 1073
>gi|392348740|ref|XP_003750185.1| PREDICTED: laminin subunit beta-1 [Rattus norvegicus]
Length = 1834
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G++CD C YD G
Sbjct: 443 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPFG 502
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R Q N + R
Sbjct: 503 CKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-----QCLPQHWGLSNDLDGCRP 557
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 558 CDCDL-----GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 596
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 87/231 (37%), Gaps = 72/231 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G +C+ C+ YY + C C CN +G++ CN + G+C
Sbjct: 1043 GRCLKCLYHTEGDHCQFCQHGYYGDALRQDCRKCVCNYLGTVREHCNGSDCHCDKTTGQC 1102
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC + + GC+ C NC++V
Sbjct: 1103 SCLPNVIGQNCDRCAPHTWQLASGTGCEPC------------NCNAVH------------ 1138
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
+F P+ N G+CQC PG G
Sbjct: 1139 ------------SFGPSCNEF-------------------------TGQCQCMPGFGGRT 1161
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1162 CSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1210
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 798 PMTDVCRNIIFSISALIHQAGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 857
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK C+C+ GSV + CD+V GQC
Sbjct: 858 TFGFGPNGCKPCDCHLQGSV--SAFCDAVTGQC 888
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GSV + CD+V
Sbjct: 827 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSV--SAFCDAV 884
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 885 TGQCHCFQGIYARQC 899
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 102/238 (42%), Gaps = 30/238 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS++ C++ G+C C G+
Sbjct: 837 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPNGCKPCDCHLQGSVSAFCDAVTGQCHCFQGI 894
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC + F C+ C+CN + +CD+V G+C S Q + G H R
Sbjct: 895 YARQCDRCLPGFWGF--PSCQPCQCN-----GHAEDCDTVTGECLSCQDYTTG--HNCER 945
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 946 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQLA----CVCDPGYIGS 1001
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C ++ DFG C+ C+C+ + CD G+C +C + EG C+
Sbjct: 1002 RCDGCASGYFGNPSDFG-GSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQ 1058
>gi|157119421|ref|XP_001653373.1| laminin alpha-1, 2 chain [Aedes aegypti]
gi|108883156|gb|EAT47381.1| AAEL001477-PA [Aedes aegypti]
Length = 3138
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 111/228 (48%), Gaps = 26/228 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C+ + G C KC Y+ C C+C+P GS L+C++ G+C CK GV
Sbjct: 941 GQCV-CKPNVMGRQCNKCMVGYWNVQSGVGCIPCSCDPNGSGKLECDTNSGQCFCKDGVE 999
Query: 83 GDKCDRCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G KCDRC +Y F GCK CE C A V CD G+C +S G E R
Sbjct: 1000 GVKCDRCQQGYYGFSSQGCKRCEQCASAAYV-----CDPDTGRCVCPP-NSHGH---ECR 1050
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
+ + + R R C+ D GS+ CNS G+C CK G TG +C+ C +
Sbjct: 1051 ICAVNTWGNVFQR--GCRHCECDI-----AGSIGQTCNSGTGQCNCKEGYTGRQCNECSI 1103
Query: 201 NHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
+Y G C+ C+C+ GS+ N + +CD GQC CK G QC
Sbjct: 1104 GYY--GYPNCRRCDCDERGSIPNSDGSLDCDE-HGQCHCKAMTFGRQC 1148
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+C+G SN C + G CL+C+ + G +CE C D +Y C AC C
Sbjct: 1444 CDCSGRSNECHPET---------GVCLNCRNNTGGDHCEVCADGFYGTPSHGSCHACPC- 1493
Query: 61 PIGSLNLQ--CNSEG---RCQCKPGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSV 112
P N C G C CKPG TG C+ C+ ++ F + C+SC CN GS+
Sbjct: 1494 PETRKNFAKGCIVRGDKVSCICKPGYTGRLCEACEKGYFGFPHLEDGRCESCGCNREGSI 1553
Query: 113 KNTPNCDSVKGQC 125
+ CDS GQC
Sbjct: 1554 SD--ECDSWTGQC 1564
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 27/142 (19%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
C CNG + C++D+++ + GG C++C G NCEKC YY+ S
Sbjct: 223 CECNGHAKECYYDRDVDEKGLSVNVRGKLSGGGVCMNCTKFTTGINCEKCIPFYYRPSER 282
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C CNC+ GS +CN G C CK G TG +C C ++ GE C C
Sbjct: 283 MPNAEEPCVPCNCSAKGSTG-ECNPIGGECVCKKGFTGSRCMECAPGYH--GE-NCTKCL 338
Query: 106 CNPAGSVKNTPNCDSVKGQCES 127
C+ G++ G+CES
Sbjct: 339 CDIKGTMPG--------GECES 352
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDS 229
GS L+C++ G+C CK GV G KCDRC +Y F GCK CE C A V CD
Sbjct: 979 GSGKLECDTNSGQCFCKDGVEGVKCDRCQQGYYGFSSQGCKRCEQCASAAYV-----CDP 1033
Query: 230 VKGQCECKDNVEGAQCR 246
G+C C N G +CR
Sbjct: 1034 DTGRCVCPPNSHGHECR 1050
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 184 CQCKPGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
C CKPG TG C+ C+ ++ F + C+SC CN GS+ + CDS GQC CK +
Sbjct: 1513 CICKPGYTGRLCEACEKGYFGFPHLEDGRCESCGCNREGSISD--ECDSWTGQCRCKPGI 1570
Query: 241 EGAQC 245
G +C
Sbjct: 1571 TGMKC 1575
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 103/280 (36%), Gaps = 61/280 (21%)
Query: 4 NGFSNRCFFD--KELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP 61
N FS C EL N T + C C G +CE C D YY G+ C P
Sbjct: 698 NNFSPSCLLKGGTELLNNTEY--ICTQCPEGYTGDHCEICDDGYY---GNPMEVGGKCLP 752
Query: 62 IGSLNLQCNSE-GRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
CN+ G C +C G +C+RC ++ + GC+ C C+ G+++N CD
Sbjct: 753 CPCHGGPCNARTGECIECLGNTEGWRCERCKSGYWGLPDEGCEPCSCSEIGALENV--CD 810
Query: 120 SVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
+ GQC A+ R + + GN D C+ GS N C
Sbjct: 811 VITGQCICKARYGGR---------RCDECDSGYGNLDLDCPACECHA-----NGSANGVC 856
Query: 179 NS-EGRCQCKPGVTGDKCDRCDVNHYDFGE------------------------------ 207
+ G+C CK GV G KCD+C + E
Sbjct: 857 HKLSGQCVCKLGVEGIKCDQCQEEFFGLSEEFPDGCEGTAESKSRTGRFLRCSNSSANSR 916
Query: 208 --AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C C+ GS C GQC CK NV G QC
Sbjct: 917 IFIVCSGCRCHVEGSANRL--CHRQSGQCVCKPNVMGRQC 954
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ G CE C Y+ D C +C CN GS++ +C+S G+C+CKPG+TG K
Sbjct: 1515 CKPGYTGRLCEACEKGYFGFPHLEDGRCESCGCNREGSISDECDSWTGQCRCKPGITGMK 1574
Query: 86 CDRCDVNHYDFGEAGCKSCE 105
CDRC+ CK C+
Sbjct: 1575 CDRCEQPKNIVQNYKCKPCD 1594
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 96/255 (37%), Gaps = 66/255 (25%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G C C + G CE+C Y+ + +NF +C G
Sbjct: 653 GECGLCHHNTFGDTCERCLSGYFGNALLGNPNDCKKCACPLEAETNNFSPSCLLK--GGT 710
Query: 66 NLQCNSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSV 121
L N+E C QC G TGD C+ CD +Y + E G C C C+ C++
Sbjct: 711 ELLNNTEYICTQCPEGYTGDHCEICDDGYYGNPMEVGGKCLPCPCHGGP-------CNAR 763
Query: 122 KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHG 171
G+C ++ G W RCK + L
Sbjct: 764 TGECIECLGNTEG---------------------WRCERCKSGYWGLPDEGCEPCSCSEI 802
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
G+L C+ G+C CK G +CD CD + + + C +CEC+ GS C +
Sbjct: 803 GALENVCDVITGQCICKARYGGRRCDECDSGYGNL-DLDCPACECHANGSANGV--CHKL 859
Query: 231 KGQCECKDNVEGAQC 245
GQC CK VEG +C
Sbjct: 860 SGQCVCKLGVEGIKC 874
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
GS++ +C+S G+C+CKPG+TG KCDRC+ CK C+
Sbjct: 1551 GSISDECDSWTGQCRCKPGITGMKCDRCEQPKNIVQNYKCKPCD 1594
>gi|383866057|ref|XP_003708488.1| PREDICTED: laminin subunit alpha-like [Megachile rotundata]
Length = 3680
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 105/238 (44%), Gaps = 48/238 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C++C YY C ACNC+ GS+ C++EG+CQC+ G +C++
Sbjct: 622 CLTNFAGRTCDQCSPGYYMYPE---CIACNCDSHGSIGASCDAEGKCQCRENFDGARCNQ 678
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQS 144
C +Y+F C+ C C+PAG ++ C S+ QC + RV + Q
Sbjct: 679 CKEGYYNF--PTCEGCNCDPAGVLETFQGCGSLPAGELCQC-------KDRVEGRICNQC 729
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------------SEGRCQCKPGVT 191
+ F W+L+ P G CN G+C CKPGV
Sbjct: 730 KPLF-------WNLQ-------PFNPYGCEECHCNIPGVIGNIGECDTKSGQCICKPGVM 775
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G CD C Y+ E+ GC C C+ GSV + CD GQC+C+ + G C+
Sbjct: 776 GRSCDHCVDGTYNLEESNFFGCTDCACDIGGSVNSV--CDKQTGQCQCQPRITGLTCK 831
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C+ C YY +CT CNC+ G+ C+ S G C CK G G +CD
Sbjct: 531 CKSNFGGRACDMCEHGYYNYP---YCTYCNCDTRGTEPGICDKSNGVCLCKEGYGGARCD 587
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C +Y G C+ C C+ GS ++ +CD+ G+C S + GR +
Sbjct: 588 QCISGYY--GYPNCRPCNCSTIGS--SSVSCDAT-GKC-SCLTNFAGRTCDQC------- 634
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P + C D++ GS+ C++EG+CQC+ G +C++C +Y+F
Sbjct: 635 -SPGYYMYPECIACNCDSH-----GSIGASCDAEGKCQCRENFDGARCNQCKEGYYNF-- 686
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQC 245
C+ C C+PAG ++ C S+ C+CKD VEG C
Sbjct: 687 PTCEGCNCDPAGVLETFQGCGSLPAGELCQCKDRVEGRIC 726
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 114/261 (43%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C D E G CLDC+ G +CE C++ YY + C C
Sbjct: 1809 CECNGHADTC--DVE-------TGICLDCKDGTTGDHCEFCQEGYYGNATGGTPTDCLIC 1859
Query: 58 NCN-PIGSLNL----QCNSEG---RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
C P+ S N + N EG C C PG G +C+ C +Y E C+ C+C
Sbjct: 1860 PCPLPVPSNNFATGCEMNEEGNKISCDCIPGYYGARCEVCASGYYGNPEVYGDFCRPCQC 1919
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ +CDSV GQC +S G + + F A R D R C +
Sbjct: 1920 SGNIDTNQVGSCDSVTGQCLQCLNNSYGEACSLCK---PGYFGDAIER-KDCRSCLCEKC 1975
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT 224
+ +C+S G C C V G+ CDRC +HY + GCK CEC G +
Sbjct: 1976 GMK-------ECDSHSGHCFCHENVVGETCDRCADDHYGYDSCEGCKPCEC---GIASES 2025
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD V GQC+CK V G +C
Sbjct: 2026 SQCDGVTGQCKCKPGVTGRRC 2046
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 102/238 (42%), Gaps = 47/238 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ G C++C YY G C CNC+ IGS ++ C++ G+C C G
Sbjct: 573 GVCL-CKEGYGGARCDQCISGYY---GYPNCRPCNCSTIGSSSVSCDATGKCSCLTNFAG 628
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
CD+C +Y + E C +C C+ GS+ + CD+ +G+C Q
Sbjct: 629 RTCDQCSPGYYMYPE--CIACNCDSHGSIGAS--CDA-EGKC-----------------Q 666
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGH--------GGSLNL-----QCNSEGRCQCKPGV 190
R+NFD A +CK Y G L + CQCK V
Sbjct: 667 CRENFDGA-----RCNQCKEGYYNFPTCEGCNCDPAGVLETFQGCGSLPAGELCQCKDRV 721
Query: 191 TGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C++C ++ F GC+ C CN G + N CD+ GQC CK V G C
Sbjct: 722 EGRICNQCKPLFWNLQPFNPYGCEECHCNIPGVIGNIGECDTKSGQCICKPGVMGRSC 779
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H GHC C + G C++C D++Y C C C I S + QC+ G+C+CKPG
Sbjct: 1983 HSGHCF-CHENVVGETCDRCADDHYGYDSCEGCKPCECG-IASESSQCDGVTGQCKCKPG 2040
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C ++++G GC SC CN SV + C++ GQC
Sbjct: 2041 VTGRRCDQCIAGYWNYGPEGCTSCGCNTGYSVGVS--CNTTTGQC 2083
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 37/260 (14%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC G S+ C +D E ++ GG C +C+ + +G NC +C+ +Y+
Sbjct: 349 CNCFGHSDECVYDAEVDEKKLSLDIHGNYEGGGVCQNCRDNTEGINCNRCKPKFYRPRDK 408
Query: 49 --SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ + C C C+ I S ++ G+C+C+ T CD C +Y F C C+C
Sbjct: 409 PLNATDVCQPCQCDFIYSTGNCADATGKCECRKEYTSPDCDSCSFGYYGF--PNCVPCQC 466
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ G+ N C++++G C S+ + + + NF + C+ +
Sbjct: 467 HLRGTDGNY--CEAIEGSCPCK--SNYAGFYCDYCAEGYFNFP-------ECLPCECNL- 514
Query: 167 PLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GSL+ C+ G C CK G CD C+ +Y++ C C C+ G+
Sbjct: 515 ----PGSLDEICDVVSGNCTCKSNFGGRACDMCEHGYYNY--PYCTYCNCDTRGTEPGI- 567
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD G C CK+ GA+C
Sbjct: 568 -CDKSNGVCLCKEGYGGARC 586
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 102/251 (40%), Gaps = 75/251 (29%)
Query: 28 DCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC------NPIGSLN------LQC--N 70
DC G CE C YY + GD FC C C N +GS + LQC N
Sbjct: 1886 DCIPGYYGARCEVCASGYYGNPEVYGD-FCRPCQCSGNIDTNQVGSCDSVTGQCLQCLNN 1944
Query: 71 SEGRC--QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
S G CKPG GD +R D C+SC C G CDS G C
Sbjct: 1945 SYGEACSLCKPGYFGDAIERKD----------CRSCLCEKCG----MKECDSHSGHCFCH 1990
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTYPLGHG------------GSLN 175
+ N + + RC D Y G+ S +
Sbjct: 1991 E-----------------------NVVGETCDRCADDHY--GYDSCEGCKPCECGIASES 2025
Query: 176 LQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
QC+ G+C+CKPGVTG +CD+C ++++G GC SC CN SV + C++ GQC
Sbjct: 2026 SQCDGVTGQCKCKPGVTGRRCDQCIAGYWNYGPEGCTSCGCNTGYSVGVS--CNTTTGQC 2083
Query: 235 ECKDNVEGAQC 245
C V G +C
Sbjct: 2084 TCLPGVVGEKC 2094
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C + G C C+ Y+ GD C +C C G +C+S G C C
Sbjct: 1936 GQCLQCLNNSYGEACSLCKPGYF---GDAIERKDCRSCLCEKCGMK--ECDSHSGHCFCH 1990
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G+ CDRC +HY + GCK CEC G + CD V GQC+ + GR
Sbjct: 1991 ENVVGETCDRCADDHYGYDSCEGCKPCEC---GIASESSQCDGVTGQCK-CKPGVTGR-R 2045
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ + N+ P G C +T G S+ + CN+ G+C C PGV G+KCD
Sbjct: 2046 CDQCIAGYWNYGPEG-----CTSCGCNT-----GYSVGVSCNTTTGQCTCLPGVVGEKCD 2095
Query: 197 RCDVNHYDFGEAGCKSCE 214
C + GC +C+
Sbjct: 2096 HCPYRNVLIPGQGCFACD 2113
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 93/226 (41%), Gaps = 40/226 (17%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
+C+ + P+C+ C YY G C C C+ G+ C + EG C CK G C
Sbjct: 438 ECRKEYTSPDCDSCSFGYY---GFPNCVPCQCHLRGTDGNYCEAIEGSCPCKSNYAGFYC 494
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
D C +++F E C CECN GS+ CD V G C +
Sbjct: 495 DYCAEGYFNFPE--CLPCECNLPGSLDEI--CDVVSGNC-----------------TCKS 533
Query: 147 NFDPAGNRIWDLRRCKRDTYPL-------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
NF G R D+ YP G + S G C CK G G +CD+C
Sbjct: 534 NF---GGRACDMCEHGYYNYPYCTYCNCDTRGTEPGICDKSNGVCLCKEGYGGARCDQCI 590
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+Y G C+ C C+ GS ++ +CD+ G+C C N G C
Sbjct: 591 SGYY--GYPNCRPCNCSTIGS--SSVSCDAT-GKCSCLTNFAGRTC 631
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 41 CRDNYYQ--KSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
CRD+ + S +N CNC+ G+++ +C+ G +C CKP + G +C+ C Y F
Sbjct: 1364 CRDSIFSITASYNNGALPCNCDIDGTISFECDKFGGQCPCKPNIIGRRCEICKTGFYGF- 1422
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT-ELRVQSRKNFDPAGNRIW 156
C+ C C +T C+ G C + R + E R FDP I
Sbjct: 1423 -PNCRPCNC------PSTALCEPETGACICPSRVTGERCNQCEPRTYG---FDP----II 1468
Query: 157 DLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
C + G +LQC+ G C+CK V +CD+C + F C+ C+C
Sbjct: 1469 GCEECNCSFLGVVDG---DLQCDLFNGTCRCKENVVDRQCDKCKAGYSQFPH--CEKCDC 1523
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G+ + CD +C CK+NV+G+ C
Sbjct: 1524 DTRGTTGDI--CDQYTAECFCKENVQGSAC 1551
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL-----QCNSEGRCQCKPGV 81
C+ + DG C +C++ YY NF C CNC+P G L + CQCK V
Sbjct: 667 CRENFDGARCNQCKEGYY-----NFPTCEGCNCDPAGVLETFQGCGSLPAGELCQCKDRV 721
Query: 82 TGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVH 137
G C++C ++ F GC+ C CN G + N CD+ GQC + R H
Sbjct: 722 EGRICNQCKPLFWNLQPFNPYGCEECHCNIPGVIGNIGECDTKSGQCICKPGVMGRSCDH 781
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
V N + + + C D GGS+N C+ + G+CQC+P +TG C
Sbjct: 782 C---VDGTYNLEES--NFFGCTDCACDI-----GGSVNSVCDKQTGQCQCQPRITGLTCK 831
Query: 197 RCDVNHY 203
HY
Sbjct: 832 EPLKAHY 838
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP 79
G G C C+ G C++C Y+ G CT+C CN S+ + CN+ G+C C P
Sbjct: 2030 GVTGQC-KCKPGVTGRRCDQCIAGYWNY-GPEGCTSCGCNTGYSVGVSCNTTTGQCTCLP 2087
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCE 105
GV G+KCD C + GC +C+
Sbjct: 2088 GVVGEKCDHCPYRNVLIPGQGCFACD 2113
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPG 80
G C+ C+ G +C+ C D Y NF CT C C+ GS+N C+ + G+CQC+P
Sbjct: 766 GQCI-CKPGVMGRSCDHCVDGTYNLEESNFFGCTDCACDIGGSVNSVCDKQTGQCQCQPR 824
Query: 81 VTGDKCDRCDVNHY 94
+TG C HY
Sbjct: 825 ITGLTCKEPLKAHY 838
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
GG C C+ + G CE C+ +Y G C CNC P +L C E G C C
Sbjct: 1397 FGGQC-PCKPNIIGRRCEICKTGFY---GFPNCRPCNC-PSTAL---CEPETGACICPSR 1448
Query: 81 VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
VTG++C++C+ Y F GC+ C C+ G V CD G C +
Sbjct: 1449 VTGERCNQCEPRTYGFDPIIGCEECNCSFLGVVDGDLQCDLFNGTCRCKE---------- 1498
Query: 140 LRVQSRK--NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V R+ ++ +C DT G G + Q +E C CK V G CD
Sbjct: 1499 -NVVDRQCDKCKAGYSQFPHCEKCDCDTR--GTTGDICDQYTAE--CFCKENVQGSACDV 1553
Query: 198 CDVNHYDFGEA---GCKSCEC 215
C ++ E+ GC C C
Sbjct: 1554 CKEGTFNIQESNEEGCTKCFC 1574
>gi|354490718|ref|XP_003507503.1| PREDICTED: laminin subunit alpha-1, partial [Cricetulus griseus]
Length = 2498
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 106/237 (44%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C + DG +CE+C D +Y GD C ACNC+ GSL+ C+ E G C CK
Sbjct: 289 GECLKCLWNTDGAHCERCADGFY---GDAVTAKNCQACNCHENGSLSGMCHLETGLCDCK 345
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC C C+ GS+ + NC GQC H
Sbjct: 346 PQVTGQQCDQCLPGYYGLDTGHGCVPCNCSMEGSMSD--NCTE-DGQC-----------H 391
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPG 189
V +K RC Y GG C + G C C P
Sbjct: 392 CVPGVSGKK-----------CDRCSHGFYGYQDGGCTPCDCAHTQNNCDPNSGECLCPPH 440
Query: 190 VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ +++ E GC++C C+ AGS P CD + GQC CK+ G C
Sbjct: 441 TQGLKCEECEETYWNLDPEQGCQACNCSVAGSTG--PQCDVLSGQCHCKEGFGGQSC 495
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 104/231 (45%), Gaps = 36/231 (15%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C YY + C CNC+ GS++ C +G+C C PGV+G KCD
Sbjct: 343 DCKPQVTGQQCDQCLPGYYGLDTGHGCVPCNCSMEGSMSDNCTEDGQCHCVPGVSGKKCD 402
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE-LR----V 142
RC Y + + GC C+C NCD G+C HT+ L+
Sbjct: 403 RCSHGFYGYQDGGCTPCDC-----AHTQNNCDPNSGECLCPP-------HTQGLKCEECE 450
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
++ N DP + C GS QC+ G+C CK G G CD+C +
Sbjct: 451 ETYWNLDPEQG----CQACNCSV-----AGSTGPQCDVLSGQCHCKEGFGGQSCDQCALG 501
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
+ F + C C+C+ G++ +T + C G C CK+NV G QC
Sbjct: 502 YRRFPD--CVPCDCDLRGTLADTCDLEQGLCSCTEDSGTCSCKENVLGHQC 550
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C G CE+C + Y+ + C ACNC+ GS QC+ G+C CK G
Sbjct: 433 GECL-CPPHTQGLKCEECEETYWNLDPEQGCQACNCSVAGSTGPQCDVLSGQCHCKEGFG 491
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G CD+C + + F + C C+C+ G++ +T CD +G C
Sbjct: 492 GQSCDQCALGYRRFPD--CVPCDCDLRGTLADT--CDLEQGLC 530
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTA 56
C+CN S+ C D E G CL+C+ G +CE C YY GD CT
Sbjct: 824 CSCNNHSDVC--DPE-------TGQCLNCRDHTAGDHCEICAPGYYGMVTGLPGD--CTP 872
Query: 57 CNC--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHYDFGEAG---CKSCEC 106
C C P S + C EG RC C PG G C+RC V ++ A C+ C+C
Sbjct: 873 CTCPHRPPFSFSPTCVLEGDGGFRCNACIPGYEGQYCERCSVGYHGNPRAAGGSCQKCDC 932
Query: 107 NPAGSVKNTPNCDSVKGQC 125
NP GSV + +CD GQC
Sbjct: 933 NPQGSVHS--DCDRASGQC 949
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C C +G CE+C Y+ ++ C C+CNP GS++ C+ + G+C CKP
Sbjct: 894 GFRCNACIPGYEGQYCERCSVGYHGNPRAAGGSCQKCDCNPQGSVHSDCDRASGQCVCKP 953
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G TG +C+ C H ++ C SC+ G++ + + D+V +S LS
Sbjct: 954 GATGLRCEECLPRHI-LIDSDCVSCDDECVGTLLS--DLDTVGDAIQSLNLS 1002
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C PG G C+RC V ++ A C+ C+CNP GSV + +CD GQC CK G
Sbjct: 900 CIPGYEGQYCERCSVGYHGNPRAAGGSCQKCDCNPQGSVHS--DCDRASGQCVCKPGATG 957
Query: 243 AQC 245
+C
Sbjct: 958 LRC 960
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 94/257 (36%), Gaps = 66/257 (25%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G C C + G +CE+C +Y +NF C+
Sbjct: 176 GICSACTHNTTGNHCEQCLPGFYGTPLHGTPGDCQPCACPLSIDSNNFSPTCHLA--DGE 233
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVK 122
N+ C+ QC PG +G C+RC +Y C C C+ +CDSV
Sbjct: 234 NVVCD-----QCAPGYSGSWCERCADGYYGNPTVPGGTCVPCNCSGNVDPLEAGHCDSVT 288
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG------------H 170
G+C ++ G H E RC Y
Sbjct: 289 GECLKCLWNTDG-AHCE--------------------RCADGFYGDAVTAKNCQACNCHE 327
Query: 171 GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCD 228
GSL+ C+ E G C CKP VTG +CD+C +Y GC C C+ GS+ + NC
Sbjct: 328 NGSLSGMCHLETGLCDCKPQVTGQQCDQCLPGYYGLDTGHGCVPCNCSMEGSMSD--NCT 385
Query: 229 SVKGQCECKDNVEGAQC 245
GQC C V G +C
Sbjct: 386 E-DGQCHCVPGVSGKKC 401
>gi|395820051|ref|XP_003783391.1| PREDICTED: netrin-4 isoform 2 [Otolemur garnettii]
Length = 591
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 295 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 354
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G CDRC + ++ FG+ GC+ C+C
Sbjct: 355 CKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMMGYWGFGDYGCRPCDC 414
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C ++
Sbjct: 415 --AGS------CDPLTGDCLTS 428
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC + ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 379 SNGDCPCKPGVAGPHCDRCMMGYWGFGDYGCRPCDC--AGS------CDPLTGDC 425
>gi|359321756|ref|XP_533089.4| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-1 isoform 1
[Canis lupus familiaris]
Length = 1794
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 103/231 (44%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ Y+Q N
Sbjct: 343 CNCNEHSSSCHFDMAVYLATGNVTGGVCDDCQHNTMGRNCEQCKPFYFQHPERDVRDPNL 402
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G+ C+ C Y G
Sbjct: 403 CERCTCDPAGSQNEGVCDGHTDFSTGLIAGQCRCKLHVEGEHCEICKEGFYGLSAEDPFG 462
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
C+SC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 463 CRSCACNPLGTIPGGNPCDSETGYCYCK------------RLVTGQHCDQCLPEHWGLSN 510
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P V G +C+ + +Y
Sbjct: 511 DLDGCRPCDCDL-----GGALNNSCSAESGQCVCRPHVIGRQCNEVEPGYY 556
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 96/256 (37%), Gaps = 56/256 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------------------QKSGDNFCTACNCNPIGS 64
G CL CQ G NCE+C YY SG F +C +P+ +
Sbjct: 889 GACLSCQDYSTGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFAGSCYQDPV-T 947
Query: 65 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDS 120
L L C C PG G +CD C + D G C+ C+C+ + CD
Sbjct: 948 LQLA------CVCDPGYVGSRCDSCAPGFFGNPSDVG-GSCRPCQCHHNIDTTDPEACDR 1000
Query: 121 VKGQC---------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
G+C E QL G LR RK C H
Sbjct: 1001 ETGRCLKCLYHTEGERCQLCRVGYYGDALRQDCRKCV------------CNSLGTEQEHC 1048
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDS 229
+ QC+ + G+C C P V G CDRC N + GC C+C+PA S P+C+
Sbjct: 1049 DGSDCQCDKATGQCSCLPNVVGLNCDRCAPNTWQLASGTGCDPCDCDPAHSFG--PSCNE 1106
Query: 230 VKGQCECKDNVEGAQC 245
GQC+C G C
Sbjct: 1107 FTGQCQCMPGFGGRTC 1122
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S AC C+P GSL+ C+ G +C+C+P V G CDRC
Sbjct: 758 PMTDVCRNIIFSISTLLHQSGLACECDPQGSLSSVCDPNGGQCRCRPNVAGRTCDRCAPG 817
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK CEC+ GSV + +C V GQC
Sbjct: 818 TFGFGPNGCKPCECHLQGSV--SASCHPVTGQC 848
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 93
G NC++C N +Q + C C+C+P S CN G+CQC PG G C C
Sbjct: 1070 GLNCDRCAPNTWQLASGTGCDPCDCDPAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELF 1129
Query: 94 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ C++C+C+P G TP CD GQC
Sbjct: 1130 WGDPNVECRACDCDPRGI--ETPQCDQSTGQC 1159
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 122/286 (42%), Gaps = 57/286 (19%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F +E+ GHC+ C+ + G NCE+C D Y+ +
Sbjct: 279 CFCYGHASECAPVEGFSEEVEGMVH--GHCM-CRHNTKGLNCEQCMDFYHDLPWRPAEGR 335
Query: 50 GDNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C CNCN S L + G C C+ G C++C ++ E
Sbjct: 336 NSNACKKCNCNEHSSSCHFDMAVYLATGNVTGGVCDDCQHNTMGRNCEQCKPFYFQHPER 395
Query: 100 G------CKSCECNPAGSVKNTPNCDS--------VKGQCESAQLSSRGRVHTE---LRV 142
C+ C C+PAGS +N CD + GQC R ++H E +
Sbjct: 396 DVRDPNLCERCTCDPAGS-QNEGVCDGHTDFSTGLIAGQC-------RCKLHVEGEHCEI 447
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVN 201
+ + + R C + PLG N C+SE G C CK VTG CD+C
Sbjct: 448 CKEGFYGLSAEDPFGCRSCACN--PLGTIPGGN-PCDSETGYCYCKRLVTGQHCDQCLPE 504
Query: 202 HYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
H+ GC+ C+C+ G++ N+ C + GQC C+ +V G QC
Sbjct: 505 HWGLSNDLDGCRPCDCDLGGALNNS--CSAESGQCVCRPHVIGRQC 548
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 97/234 (41%), Gaps = 22/234 (9%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G N C C C+ GS++ C+ G+C C GV
Sbjct: 797 GGQC-RCRPNVAGRTCDRCAPGTF-GFGPNGCKPCECHLQGSVSASCHPVTGQCHCFQGV 854
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CD G C S Q S G H R
Sbjct: 855 YARQCDRCLPGYWGF--PSCQPCQCN-----GHAEDCDPGTGACLSCQDYSTG--HNCER 905
Query: 142 VQSRKNFDPAGNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
+ DP R C D+ G + C C PG G +CD
Sbjct: 906 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFAGSCYQDPVTLQLACVCDPGYVGSRCDS 965
Query: 198 CDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
C + D G C+ C+C+ + CD G+C +C + EG +C+
Sbjct: 966 CAPGFFGNPSDVG-GSCRPCQCHHNIDTTDPEACDRETGRCLKCLYHTEGERCQ 1018
>gi|296209977|ref|XP_002751795.1| PREDICTED: laminin subunit beta-4 [Callithrix jacchus]
Length = 1761
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 105/216 (48%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S+RC FD+ Y +G GG C DCQ + +G +C++CR +Y+ S
Sbjct: 332 CSCNGHSSRCHFDRTAYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKAISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVKGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C CNP GS+ + CD GQC LS H E + + GN +
Sbjct: 452 CQPCNCNPLGSLPLS-TCDVDTGQCLC--LSYVTGTHCE---ECIVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKC 195
C D GG+ + C+ ++G+C+C+P +TG C
Sbjct: 506 CDCDI-----GGAYSNTCSPTDGQCECRPYITGRSC 536
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C G C +C+G G NCE+C D YY S C C C
Sbjct: 863 CPCNGFAELC---------DPQTGSCFNCRGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y C+ C CN
Sbjct: 914 PDAPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGVPCRPCACN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY- 166
V + +C V G+C +++G T ++ + A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTQG---TNCQLCKSGYYGSALNQT--CRRCSCHASG 1028
Query: 167 ------PLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPA 218
P G G L C+ + G C C P VTG CDRC +++ GC+SC+C+P
Sbjct: 1029 VSPAECPPGGGACL---CDPATGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPR 1085
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
S + CD + GQC CK G +C
Sbjct: 1086 TS--QSSQCDQLTGQCLCKLGYSGKRC 1110
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 84/201 (41%), Gaps = 46/201 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----------NSEG 73
G CL C + G NC+ C+ YY + + C C+C+ G +C + G
Sbjct: 989 GECLRCLHNTQGTNCQLCKSGYYGSALNQTCRRCSCHASGVSPAECPPGGGACLCDPATG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + CD + GQC +L
Sbjct: 1049 ACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSQCDQLTGQC-LCKLGY 1105
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE----------- 181
G+ +E C+ D Y G + CN E
Sbjct: 1106 SGKRCSE---------------------CQEDYYGDPPGRCIPCDCNREGTQKPICDPDT 1144
Query: 182 GRCQCKPGVTGDKCDRCDVNH 202
G C C+ GV+G +CDRC H
Sbjct: 1145 GMCHCREGVSGQRCDRCAQGH 1165
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 110/277 (39%), Gaps = 87/277 (31%)
Query: 1 CNCNGFSNRC----FFDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG +++C ++++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASKCGPMQKVRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDTPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY-DF 96
DN C +C+CN S L S G C+ C+ G CDRC Y D
Sbjct: 323 GLQDNACRSCSCNGHSSRCHFDRTAYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 97 GEA-----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
+A C CEC+P G++ G C S + DPA
Sbjct: 383 LKAISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 415
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY
Sbjct: 416 LGSV-------------------------AGQCLCKENVKGAKCDQCKPNHYGLSATDPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNP GS+ + CD GQC C V G C
Sbjct: 451 GCQPCNCNPLGSLPLS-TCDVDTGQCLCLSYVTGTHC 486
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N AC C+P GS+ C+ G +CQCKP V G CDRC Y G GC C C+P G
Sbjct: 764 NGAVACKCHPQGSVGSSCSRLGGQCQCKPLVVGHCCDRCSTGSYGLGHRGCHPCHCHPQG 823
Query: 111 SVKNTPNCDSVKGQC 125
S C V GQC
Sbjct: 824 SKATV--CHQVTGQC 836
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G +G +C C ++Y C C+CN G+ K P CD G C C++ V
Sbjct: 1097 GQCLCKLGYSGKRCSECQEDYYGDPPGRCIPCDCNREGTQK--PICDPDTGMCHCREGVS 1154
Query: 242 GAQC 245
G +C
Sbjct: 1155 GQRC 1158
>gi|351712767|gb|EHB15686.1| Laminin subunit beta-1, partial [Heterocephalus glaber]
Length = 1790
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
C+CN S+ C FD +Y TG+ GG C CQ + G +CE+C+ YYQ N
Sbjct: 339 CSCNEHSSACHFDMAVYLATGNVTGGVCDGCQHNTMGRSCEQCKPFYYQHPERDIRAPNI 398
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 399 CERCTCDPAGSQNGGICDSYTDFSTGLIAGQCRCKLHVEGEHCDVCKEGFYDLNAEDPLG 458
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC C+P G++ CDS G C R+ + ++ D + W L
Sbjct: 459 CKSCACSPLGTIPGGNPCDSGTGSCYCK------------RLVTGQHCDQCLPQHWGLSN 506
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C++E G+C C+P + G +C + +Y
Sbjct: 507 DLDGCRPCDCDV-----GGALNNSCSAESGQCSCRPHLIGRQCSEVESGYY 552
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 84/185 (45%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G C+ CR YY + C C CN +G++ +CN + G+C
Sbjct: 999 GRCLKCLYHTEGDQCQFCRSGYYGDALRQDCRKCVCNILGTVQERCNGSDCQCNQATGQC 1058
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N + GC+ C CN A S P+C+ GQC+ G
Sbjct: 1059 ACLPNVIGQNCDRCAPNTWQLASGTGCEQCSCNAAHSFG--PSCNEFTGQCQCMP-GFGG 1115
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E ++ F G+ + R C D G QC+ S GRC C GV G
Sbjct: 1116 RTCSE----CQELF--WGDPNVECRACDCDPR-----GIETPQCHQSSGRCVCVEGVEGP 1164
Query: 194 KCDRC 198
+CD+C
Sbjct: 1165 RCDKC 1169
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 105/286 (36%), Gaps = 79/286 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG + C G CL CQ G NCE+C YY
Sbjct: 871 CQCNGHAEDC---------DTATGACLRCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 921
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDV----NHYDFG 97
SG F +C +P+ +L L C C+PG G +CD+C N D G
Sbjct: 922 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCEPGYIGSRCDQCASGFFGNPLDIG 974
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRKNF 148
C+ C+C+ + CD G+C + Q G LR
Sbjct: 975 -GLCQPCQCHHNIDTSDPEGCDKKTGRCLKCLYHTEGDQCQFCRSGYYGDALR------- 1026
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDV 200
D R+C + G++ +CN + G+C C P V G CDRC
Sbjct: 1027 -------QDCRKCVCNIL-----GTVQERCNGSDCQCNQATGQCACLPNVIGQNCDRCAP 1074
Query: 201 NHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N + GC+ C CN A S P+C+ GQC+C G C
Sbjct: 1075 NTWQLASGTGCEQCSCNAAHSFG--PSCNEFTGQCQCMPGFGGRTC 1118
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR + S AC C+P GSL+ C+ G +CQC+P V G CDRC
Sbjct: 754 PMTDVCRSIIFSISALLHQAGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCDRCAPG 813
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK C+C+ GSV + +CD+ GQC
Sbjct: 814 TFGFGPSGCKPCDCHLQGSV--SASCDANTGQC 844
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 121/288 (42%), Gaps = 61/288 (21%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 275 CFCYGHASECAPVDGFNEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 331
Query: 50 GDNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA 99
N C C+CN S L + G C C+ G C++C +Y E
Sbjct: 332 NSNACKKCSCNEHSSACHFDMAVYLATGNVTGGVCDGCQHNTMGRSCEQCKPFYYQHPER 391
Query: 100 G------CKSCECNPAGSVKNTPNCDS--------VKGQCESAQLSSRGRVHTELRVQSR 145
C+ C C+PAGS +N CDS + GQC R ++H E
Sbjct: 392 DIRAPNICERCTCDPAGS-QNGGICDSYTDFSTGLIAGQC-------RCKLHVE-----G 438
Query: 146 KNFDPAGNRIWDLRR-----CKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
++ D +DL CK PLG N + G C CK VTG CD+C
Sbjct: 439 EHCDVCKEGFYDLNAEDPLGCKSCACSPLGTIPGGNPCDSGTGSCYCKRLVTGQHCDQCL 498
Query: 200 VNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
H+ GC+ C+C+ G++ N+ C + GQC C+ ++ G QC
Sbjct: 499 PQHWGLSNDLDGCRPCDCDVGGALNNS--CSAESGQCSCRPHLIGRQC 544
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 105/248 (42%), Gaps = 50/248 (20%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C C+C+ GS++ C++ G+C C PGV
Sbjct: 793 GGQC-QCRPNVVGRTCDRCAPGTF-GFGPSGCKPCDCHLQGSVSASCDANTGQCHCFPGV 850
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CD+C ++ F C+ C+CN + +CD+ G C Q + G H R
Sbjct: 851 YSRQCDQCLPGYWGF--PSCQPCQCN-----GHAEDCDTATGACLRCQDYTMG--HNCER 901
Query: 142 VQSRKNFDP------------------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
+ DP +G + R C +D L +
Sbjct: 902 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQF--ARSCYQDPVTL------------QLA 947
Query: 184 CQCKPGVTGDKCDRCDV----NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C C+PG G +CD+C N D G C+ C+C+ + CD G+C +C
Sbjct: 948 CVCEPGYIGSRCDQCASGFFGNPLDIG-GLCQPCQCHHNIDTSDPEGCDKKTGRCLKCLY 1006
Query: 239 NVEGAQCR 246
+ EG QC+
Sbjct: 1007 HTEGDQCQ 1014
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 75/192 (39%), Gaps = 43/192 (22%)
Query: 73 GRC-QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPN-----CDSVKGQC 125
GRC +C GD+C C +Y D C+ C CN G+V+ N C+ GQC
Sbjct: 999 GRCLKCLYHTEGDQCQFCRSGYYGDALRQDCRKCVCNILGTVQERCNGSDCQCNQATGQC 1058
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-----------SL 174
L +N D RC +T+ L G S
Sbjct: 1059 AC------------LPNVIGQNCD----------RCAPNTWQLASGTGCEQCSCNAAHSF 1096
Query: 175 NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
CN G+CQC PG G C C + C++C+C+P G TP C G+
Sbjct: 1097 GPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPNVECRACDCDPRGI--ETPQCHQSSGR 1154
Query: 234 CECKDNVEGAQC 245
C C + VEG +C
Sbjct: 1155 CVCVEGVEGPRC 1166
>gi|196003946|ref|XP_002111840.1| hypothetical protein TRIADDRAFT_24524 [Trichoplax adhaerens]
gi|190585739|gb|EDV25807.1| hypothetical protein TRIADDRAFT_24524, partial [Trichoplax
adhaerens]
Length = 1161
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 100/217 (46%), Gaps = 27/217 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CN ++ C F +Y RT G C +CQ + G C +C+ NY+Q++ +
Sbjct: 333 CKCNNHTSTCSFSSTVYERTNNASGSFCTNCQDNTRGDQCNQCQPNYFQQANKSLDSPDV 392
Query: 54 CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPA 109
C C+C+ G+ N CN G CQCK V G++CD C ++Y D GC C C
Sbjct: 393 CARCDCDARGTTNEPCNRLTGTCQCKSNVMGNRCDSCKSSYYGLNDTNPLGCLPCNCYND 452
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP-L 168
G+V NT CD GQC EL V R+ + + W L P L
Sbjct: 453 GTVDNTV-CDVNSGQCSC-----------ELNVDGRR-CERCKDTYWGLTSPSVQCRPCL 499
Query: 169 GH-GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
H GS +L CN S G C C+ + +C++ NHY
Sbjct: 500 CHPTGSYSLSCNDSTGLCPCRKNLVSPRCNQVTANHY 536
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C + GP+C +CR YY K+ C C CN GS++ C+ G+C C+ V
Sbjct: 971 GECLKCLYNTGGPSCSQCRPGYYGKALTRTCRPCQCNEYGSVDGNCDPITGQCTCRSNVI 1030
Query: 83 GDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE 126
G CD+C ++ GC+ C C S++ NCD+V G+C
Sbjct: 1031 GKTCDKCATGFWNITSGKGCQPCSCCRNNSLQ--ANCDAVTGKCS 1073
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 103/258 (39%), Gaps = 42/258 (16%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNP 61
N FS+ C++ + +RT C +C G NCE C YY S C C CN
Sbjct: 900 NQFSSTCYY-RSTQSRTTI--VCENCTTGYTGNNCELCAPGYYGNPTSVGGRCLPCQCNN 956
Query: 62 IGSLNLQCNSEGRC--------QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAG 110
N+ N G C +C G C +C +Y G+A C+ C+CN G
Sbjct: 957 ----NINVNEPGSCHNQTGECLKCLYNTGGPSCSQCRPGYY--GKALTRTCRPCQCNEYG 1010
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG- 169
SV NCD + GQC + R V K D W++ K P
Sbjct: 1011 SVDG--NCDPITGQC-----TCRSNV-------IGKTCDKCATGFWNITSGK-GCQPCSC 1055
Query: 170 -HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
SL C++ G+C C G +GDKC C+ + C +C CN GS+ C
Sbjct: 1056 CRNNSLQANCDAVTGKCSCIKGYSGDKCCDCEDGFWGNPSTTCYACNCNKMGSLST--EC 1113
Query: 228 DSVKGQCECKDNVEGAQC 245
D GQC C G +C
Sbjct: 1114 DRKTGQCYCIAAAGGFRC 1131
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD------FGE-AGCKSCECN----- 107
P LN++ G+C C+ +G +C+ C + D + E GC C+CN
Sbjct: 282 TPPAKLNIRDMIHGKCSCQHFTSGTQCNVCLPEYNDQPWIAGYQENKGCSGCKCNNHTST 341
Query: 108 --PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL----RRC 161
+ +V N ++ C + Q ++RG + Q + N+ N+ D RC
Sbjct: 342 CSFSSTVYERTN-NASGSFCTNCQDNTRG----DQCNQCQPNYFQQANKSLDSPDVCARC 396
Query: 162 KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNP 217
D G+ N CN G CQCK V G++CD C ++Y D GC C C
Sbjct: 397 DCDA-----RGTTNEPCNRLTGTCQCKSNVMGNRCDSCKSSYYGLNDTNPLGCLPCNCYN 451
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+V NT CD GQC C+ NV+G +C
Sbjct: 452 DGTVDNTV-CDVNSGQCSCELNVDGRRC 478
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C+CK + G +CD+C Y FG GC+ C+C+ GS N +CD+ GQC CK N+
Sbjct: 762 GQCRCKKNIFGRRCDKCLPGAYGFGLPDGCRECKCDRQGST-NFESCDANTGQCNCKRNI 820
Query: 241 EGAQC 245
G C
Sbjct: 821 VGLNC 825
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 56 ACNCNPIGSLN-LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 112
C+CNP G+++ C+ G +C+CK + G +CD+C Y FG GC+ C+C+ GS
Sbjct: 743 VCDCNPTGTISGTACDKVGGQCRCKKNIFGRRCDKCLPGAYGFGLPDGCRECKCDRQGST 802
Query: 113 KNTPNCDSVKGQC 125
N +CD+ GQC
Sbjct: 803 -NFESCDANTGQC 814
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 102/281 (36%), Gaps = 65/281 (23%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNS-EGRCQCKPG 80
GG C C+ + G C+KC Y + C C C+ GS N + C++ G+C CK
Sbjct: 761 GGQC-RCKKNIFGRRCDKCLPGAYGFGLPDGCRECKCDRQGSTNFESCDANTGQCNCKRN 819
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCEC-------------------NPAG----------- 110
+ G C RC +Y F C+ CEC N AG
Sbjct: 820 IVGLNCARCQYFYYGF--PNCQRCECYGHSASCDQRNGTCLNCLHNTAGPTCNQCRTGFV 877
Query: 111 --SVKNTPNCDSVKGQCESAQLSSRGRVHTELR-VQSRKNFD----PAGNRIWDLRRCKR 163
+ TPN D V+ +C ++ R QSR G + C
Sbjct: 878 GTATTGTPN-DCVRCECPGGSSGNQFSSTCYYRSTQSRTTIVCENCTTGYTGNNCELCAP 936
Query: 164 DTY--PLGHGGS-LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC------- 213
Y P GG L QCN+ +PG ++ C Y+ G C C
Sbjct: 937 GYYGNPTSVGGRCLPCQCNNNINVN-EPGSCHNQTGECLKCLYNTGGPSCSQCRPGYYGK 995
Query: 214 ---------ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CN GSV NCD + GQC C+ NV G C
Sbjct: 996 ALTRTCRPCQCNEYGSVDG--NCDPITGQCTCRSNVIGKTC 1034
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C G C C D ++ C ACNCN +GSL+ +C+ + G+C C G +CD
Sbjct: 1074 CIKGYSGDKCCDCEDGFWGNPSTT-CYACNCNKMGSLSTECDRKTGQCYCIAAAGGFRCD 1132
Query: 88 RC 89
RC
Sbjct: 1133 RC 1134
>gi|1586274|prf||2203365A laminin alpha5
Length = 3610
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ DGP+C++C Y+ G C AC C+P G+L+ QC G C C+PG TG C
Sbjct: 530 CRPGFDGPHCDRCLPGYH---GYPDCHACACDPRGALDQQCGVGGLCHCRPGNTGATCQE 586
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV---HTELRVQSR 145
C Y F C C C+ GS+ T CD GQC R RV H ++ V
Sbjct: 587 CSPGFYGF--PSCIPCHCSADGSLHTT--CDPTTGQCRC-----RPRVTGLHCDMCVPGA 637
Query: 146 KNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD 204
NF C+ + +P G + ++ C C+ V G CDRC ++
Sbjct: 638 YNFP----------YCEAGSCHPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGYWG 687
Query: 205 FGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ GC C C+P G++ C GQC CK +V G C +
Sbjct: 688 LSASNPEGCTRCSCDPRGTLGGVTECQG-NGQCFCKAHVCGKTCAA 732
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 118/290 (40%), Gaps = 76/290 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G + C++D E+ R GG CLDCQ G NCE+C +++
Sbjct: 281 CNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQ 340
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-------- 98
+ C C+C + + GRC C+P TG+ C C + DF
Sbjct: 341 PLDSPHVCRPCDCESDFTDGTCEDLTGRCYCRPNFTGELCAACAEGYTDFPHCYPLPSFP 400
Query: 99 ----------AG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
AG +C+CN AG+ N D G+C + + RG H EL
Sbjct: 401 HNDTREQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRC-VCKPNFRG-AHCEL------- 451
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNSE-GRCQCKPGVTGDKC 195
C P HG G N C+ E G+C C+ G GD+C
Sbjct: 452 -------------CA----PGFHGPSCHPCQCSSPGVANSLCDPESGQCMCRTGFEGDRC 494
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D C + ++ F C+ C C+PAG++ CD G+C+C+ +G C
Sbjct: 495 DHCALGYFHF--PLCQLCGCSPAGTLPE--GCDEA-GRCQCRPGFDGPHC 539
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ +G C+ C Y+ C C C+P G+L C+ GRCQC+PG G
Sbjct: 481 GQCM-CRTGFEGDRCDHCALGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCQCRPGFDG 536
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
CDRC ++ + + C +C C+P G++ C V G C
Sbjct: 537 PHCDRCLPGYHGYPD--CHACACDPRGALDQ--QC-GVGGLCHCR--------------- 576
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC---------QCK--PGVTG 192
GN + C Y G + C+++G QC+ P VTG
Sbjct: 577 -------PGNTGATCQECSPGFY--GFPSCIPCHCSADGSLHTTCDPTTGQCRCRPRVTG 627
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD C Y+F C++ C+PAG P + C C+ +VEG C
Sbjct: 628 LHCDMCVPGAYNF--PYCEAGSCHPAGLAPANPALPETQAPCMCRAHVEGPSC 678
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 109/262 (41%), Gaps = 42/262 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G C+ CQ + +G CE+CR + N C +C
Sbjct: 1782 CQCHGHSDRCLPGS---------GICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSC 1832
Query: 58 NCNPIGSLN-------LQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
C P+ + + N +C C+PG G C+RC + + C+ C+C+
Sbjct: 1833 PC-PLAVPSNNFADGCVLRNGRTQCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDCS 1891
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DT 165
G +CD + G C + G H E + F GN + C R D
Sbjct: 1892 GNGDPNMIFSDCDPLTGACRGCLRHTTGP-HCE---RCAPGF--YGNALLP-GNCTRCDC 1944
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
P G C+ + GRC CK GVTG +CDRC ++ F + GC+ C C PA
Sbjct: 1945 SPCG-----TETCDPQSGRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGS- 1998
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
C GQC C+ G QC
Sbjct: 1999 --ECHPQSGQCHCQPGTTGPQC 2018
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 89/207 (42%), Gaps = 33/207 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP+CE+C +Y + CT C+C
Sbjct: 1890 CSGNGDPNMIFSDCDPLT-----GACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRCDC 1944
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNC 118
+P G+ S GRC CK GVTG +CDRC ++ F + GC+ C C PA C
Sbjct: 1945 SPCGTETCDPQS-GRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGSE---C 2000
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCKRDTYPLGHGGSLNL 176
GQC Q + G E W L + C+R P GH
Sbjct: 2001 HPQSGQCH-CQPGTTGPQCLE-----------CAPGYWGLPEKGCRRCQCPRGH------ 2042
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNH 202
C+ G C C PG++G++CD C H
Sbjct: 2043 -CDPHTGHCTCPPGLSGERCDTCSQQH 2068
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+P V G +CD C Y G C+ C+C+ AG++ + CD + GQC CK+NV+
Sbjct: 1470 GQCRCRPNVAGRRCDTCAPGFY--GYPSCRPCDCHEAGTMASV--CDPLTGQCHCKENVQ 1525
Query: 242 GAQC 245
G++C
Sbjct: 1526 GSRC 1529
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG TG +C C ++ E GC+ C+C P G +CD G C C +
Sbjct: 2005 GQCHCQPGTTGPQCLECAPGYWGLPEKGCRRCQC-PRG------HCDPHTGHCTCPPGLS 2057
Query: 242 GAQC 245
G +C
Sbjct: 2058 GERC 2061
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C+ C +Y G C C+C+ G++ C+ G+C CK V G +CD
Sbjct: 1474 CRPNVAGRRCDTCAPGFY---GYPSCRPCDCHEAGTMASVCDPLTGQCHCKENVQGSRCD 1530
Query: 88 RCDVNHYDFGEAGCKSC 104
+C V + A K C
Sbjct: 1531 QCRVGTFSLDAANPKGC 1547
>gi|47211092|emb|CAF89909.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2082
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQC+S G C CKPGVTGDKCDRC + EAGC+ C C+P+GS T CD
Sbjct: 697 GSESLQCDSRGVCTCKPGVTGDKCDRCQPGFHSLTEAGCRPCACSPSGS---TQECDVNT 753
Query: 232 GQCECKDNVEGAQC 245
GQC CKDNVEG C
Sbjct: 754 GQCRCKDNVEGFSC 767
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 62/138 (44%), Gaps = 49/138 (35%)
Query: 34 DGPNCEKCRDNYYQKSGDNFCTACNCNPIG------------------------------ 63
DGPNCE+CR+N+++ C AC C+ +G
Sbjct: 622 DGPNCERCRENHHRDLNGERCLACGCSAVGESPPRLCWIPQDVLFPHKYKRVCVCVCACV 681
Query: 64 ----------------SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 107
S +LQC+S G C CKPGVTGDKCDRC + EAGC+ C C+
Sbjct: 682 RVCVCVCARAGWWCPGSESLQCDSRGVCTCKPGVTGDKCDRCQPGFHSLTEAGCRPCACS 741
Query: 108 PAGSVKNTPNCDSVKGQC 125
P+GS T CD GQC
Sbjct: 742 PSGS---TQECDVNTGQC 756
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 92/209 (44%), Gaps = 43/209 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCN---SEGRCQ 76
G CL C + +G C++C++ +Y + + C C+C+P+G++ Q + G+C
Sbjct: 1177 GKCLKCIYNTEGSFCDRCKNGFYGNPLASNPADKCKPCSCSPLGTVGGQSSCSQVTGQCP 1236
Query: 77 CKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V G C C ++ GC C+C+P GS CD + GQCE Q G
Sbjct: 1237 CHPNVAGRDCGACQPGFFNLQSGTGCARCDCDPVGSTNG--QCDIITGQCE-CQPGVAG- 1292
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSEGRCQ 185
LR Q RC+ D + G S QC +GRCQ
Sbjct: 1293 ----LRCQ----------------RCELDFFGFSSSGCKPCDCDPEGSAAAQCQEDGRCQ 1332
Query: 186 CKPGVTGDKCDRCDVN-HYDFGEAGCKSC 213
C+PG G +CD C+ N Y+ GC+ C
Sbjct: 1333 CRPGFVGTRCDMCEENFFYNRSVPGCQQC 1361
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D ++ Q C AC C S N+ N+ G C
Sbjct: 1122 CTNCPAGTTGKRCELCDDGFFGDPLGQSGPIRTCRACKC----SENIDPNAVGNCDRETG 1177
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC Y A CK C C+P G+V +C V GQC
Sbjct: 1178 KCLKCIYNTEGSFCDRCKNGFYGNPLASNPADKCKPCSCSPLGTVGGQSSCSQVTGQCP- 1236
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRCQ 185
H + + P + C R D P+G S N QC+ G+C+
Sbjct: 1237 --------CHPNVAGRDCGACQPGFFNLQSGTGCARCDCDPVG---STNGQCDIITGQCE 1285
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PGV G +C RC+++ + F +GCK C+C+P GS D G+C+C+ G +C
Sbjct: 1286 CQPGVAGLRCQRCELDFFGFSSSGCKPCDCDPEGSAAAQCQED---GRCQCRPGFVGTRC 1342
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S+ C D G C DCQ + G +CE+CRD +Y + TA +C+
Sbjct: 1054 CSCNGHSDSCNPDT---------GAC-DCQDNTAGLSCERCRDGFYGDASGG--TAADCH 1101
Query: 61 PIG-------SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECN 107
P ++ L+ C G TG +C+ CD + G++G C++C+C+
Sbjct: 1102 PCPCPAGATCAVVLRSKEVVCTNCPAGTTGKRCELCDDGFFGDPLGQSGPIRTCRACKCS 1161
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTY 166
NCD G+C ++ G R ++ +P + D +CK
Sbjct: 1162 ENIDPNAVGNCDRETGKCLKCIYNTEGSFCD--RCKNGFYGNPLASNPAD--KCKPCSCS 1217
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
PLG G + G+C C P V G C C ++ GC C+C+P GS
Sbjct: 1218 PLGTVGGQSSCSQVTGQCPCHPNVAGRDCGACQPGFFNLQSGTGCARCDCDPVGSTNG-- 1275
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
CD + GQCEC+ V G +C+
Sbjct: 1276 QCDIITGQCECQPGVAGLRCQ 1296
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C+ ++ + + C C C+P GS + G+C+CK V G CDR
Sbjct: 711 CKPGVTGDKCDRCQPGFHSLT-EAGCRPCACSPSGSTQECDVNTGQCRCKDNVEGFSCDR 769
Query: 89 CDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
C + +++ GC +C C SV C+S G SS R + Q R
Sbjct: 770 CKLGYFNLDPQNPLGCTACFCFHHSSV-----CESADGFSVHTITSSFQRDNERWTAQQR 824
>gi|348539077|ref|XP_003457016.1| PREDICTED: laminin subunit beta-2-like [Oreochromis niloticus]
Length = 1865
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 108/231 (46%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN S C FD +Y TG+ GG C DCQ + G +CE C+ YY+ +
Sbjct: 411 CNCNSHSTACHFDMAVYLATGNVSGGVCDDCQHNTMGHHCETCKPFYYKDPVKDIRDPRV 470
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C+C+P GS N C+S G+C+CK V G +CDRC + G
Sbjct: 471 CIPCDCDPDGSQNGGMCDSHTDPSLGMVAGQCRCKTNVEGPRCDRCKTGFFGLSTDNPHG 530
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
C+ C+C+P G+V + CD V G C R+ + ++ D W L
Sbjct: 531 CQPCQCDPRGTVSGSSQCDPVSGDCFCK------------RLVTGRSCDQCLPEHWALSH 578
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C+ D GG+L+ C+ E G+C+C+ +TG +C + + ++
Sbjct: 579 DLNGCRDCECDI-----GGALDNHCSMESGQCRCRSHITGRQCTQVESGYF 624
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 111/272 (40%), Gaps = 48/272 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG +++C RTG C+ C+ + G CE+C + YY + C
Sbjct: 942 CQCNGHADQC------DQRTGA---CISCRDNTGGDKCERCANGYYGNPILGTASGSQCR 992
Query: 61 P--------------IGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKS 103
P + N + C C G TG +C+ C +Y + +AG C+
Sbjct: 993 PCPCPDGPNSGRHFAVSCYQDSHNRQIICNCNQGYTGARCEECAPGYYGNPSQAGGRCQP 1052
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+CN + + CDS GQC ++ G + F A R + R+C
Sbjct: 1053 CQCNNNIDMSDVNACDSQTGQCNKCLYNTEG---PNCGICKSGFFGDASRR--NCRKCTC 1107
Query: 164 DTYPLGHGGSLNLQC---------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSC 213
+ G+ QC + G+CQC V G CD C NH++ GC+ C
Sbjct: 1108 NFL-----GTERSQCIEREDCVCQRATGQCQCLQNVVGLACDHCAPNHWNLASGRGCEPC 1162
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+P SV T C+ GQC+C+D G C
Sbjct: 1163 SCDPNNSV--TSGCNEFSGQCQCRDGFGGKTC 1192
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSEGR 74
G C C + +GPNC C+ ++ + C C CN +G+ QC + G+
Sbjct: 1072 GQCNKCLYNTEGPNCGICKSGFFGDASRRNCRKCTCNFLGTERSQCIEREDCVCQRATGQ 1131
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CQC V G CD C NH++ GC+ C C+P SV T C+ GQC+ R
Sbjct: 1132 CQCLQNVVGLACDHCAPNHWNLASGRGCEPCSCDPNNSV--TSGCNEFSGQCQ-----CR 1184
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
+ ++NF GN R C D G QCN G C C+ GV+G
Sbjct: 1185 DGFGGKTCTDCQENF--WGNPRTQCRACDCDWR-----GIETSQCNRVTGHCVCQQGVSG 1237
Query: 193 DKCDRC 198
+CD+C
Sbjct: 1238 VRCDQC 1243
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+P GS++ C+ G +C+C+P V G +C +C Y FG +GC +C C+ GSV T
Sbjct: 848 CNCDPQGSISSLCDVRGGQCRCRPNVMGRRCHQCAPGMYGFGPSGCTACGCSLEGSV--T 905
Query: 116 PNCDSVKGQCE 126
CD GQC+
Sbjct: 906 RLCDKFTGQCQ 916
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 107/245 (43%), Gaps = 44/245 (17%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C Y G + CTAC C+ GS+ C+ G+CQC+PG
Sbjct: 864 GGQC-RCRPNVMGRRCHQCAPGMY-GFGPSGCTACGCSLEGSVTRLCDKFTGQCQCRPGA 921
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG------- 134
G +CDRC ++ F C+ C+CN + CD G C S + ++ G
Sbjct: 922 FGQRCDRCQSGYWGF--PSCRPCQCN-----GHADQCDQRTGACISCRDNTGGDKCERCA 974
Query: 135 -------RVHTELRVQSRK---NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC 184
+ T Q R P R + + C +D++ N + C
Sbjct: 975 NGYYGNPILGTASGSQCRPCPCPDGPNSGRHFAV-SCYQDSH------------NRQIIC 1021
Query: 185 QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNV 240
C G TG +C+ C +Y + +AG C+ C+CN + + CDS GQC +C N
Sbjct: 1022 NCNQGYTGARCEECAPGYYGNPSQAGGRCQPCQCNNNIDMSDVNACDSQTGQCNKCLYNT 1081
Query: 241 EGAQC 245
EG C
Sbjct: 1082 EGPNC 1086
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G +CDRC + GC+ C+C+P G+V + CD V G C CK
Sbjct: 500 GQCRCKTNVEGPRCDRCKTGFFGLSTDNPHGCQPCQCDPRGTVSGSSQCDPVSGDCFCKR 559
Query: 239 NVEGAQC 245
V G C
Sbjct: 560 LVTGRSC 566
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 70/190 (36%), Gaps = 44/190 (23%)
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C+ + +P + D C + + G C C+P GS+ + CD GQC
Sbjct: 813 RCHDGAKSVTRP-LMSDTCAKLISSMSAIINDGALPCNCDPQGSISSL--CDVRGGQCRC 869
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE------ 181
R H +C Y G G C+ E
Sbjct: 870 RPNVMGRRCH----------------------QCAPGMYGFGPSGCTACGCSLEGSVTRL 907
Query: 182 -----GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-E 235
G+CQC+PG G +CDRC ++ F C+ C+CN + CD G C
Sbjct: 908 CDKFTGQCQCRPGAFGQRCDRCQSGYWGF--PSCRPCQCN-----GHADQCDQRTGACIS 960
Query: 236 CKDNVEGAQC 245
C+DN G +C
Sbjct: 961 CRDNTGGDKC 970
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQC+ G G C C N + C++C+C+ G T C+ V G C C+ V
Sbjct: 1179 GQCQCRDGFGGKTCTDCQENFWGNPRTQCRACDCDWRGI--ETSQCNRVTGHCVCQQGVS 1236
Query: 242 GAQC 245
G +C
Sbjct: 1237 GVRC 1240
>gi|432865797|ref|XP_004070618.1| PREDICTED: laminin subunit beta-1-like [Oryzias latipes]
Length = 1766
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 105/224 (46%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-----F 53
CNCNG SN+C FD +Y TG+ GG C +C + G NCE C+ YYQ +
Sbjct: 406 CNCNGHSNQCHFDMAVYLATGNVSGGVCDNCLHNTVGRNCEMCQPFYYQDPNRDVRDPQV 465
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C+C+P+GS + C+S G+C+CK V G +CD C V +Y + G
Sbjct: 466 CLLCDCDPVGSFDGGVCDSHTDLDMGMIAGQCRCKANVKGIRCDDCKVGYYGLSQNDPQG 525
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C C+P G ++ CD + G C S + V Q + N + R
Sbjct: 526 CQPCNCDPRGIIRMGDPCDQISGDC-----SCKRYVTGRYCDQCLPEYWGLSNDQFGCRP 580
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN +C E G+C C+ + G +C ++
Sbjct: 581 CDCD-----FGGALNNRCMMESGQCDCRRHLIGRQCSEVQSGYF 619
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
AC C+P GSL+ +CN G +C+CKP V G +CD+C Y FG +GC +C C+P GS +
Sbjct: 836 ACQCDPQGSLSSECNQVGGQCRCKPNVMGRRCDQCAPGTYGFGVSGCTACNCHPDGS--S 893
Query: 115 TPNCDSVKGQC 125
+ CD + GQC
Sbjct: 894 SHQCDPLTGQC 904
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 13/89 (14%)
Query: 168 LGHGGSLNLQCNSE-----------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
+ H G+L QC+ + G+C+CKP V G +CD+C Y FG +GC +C C+
Sbjct: 829 IIHDGALACQCDPQGSLSSECNQVGGQCRCKPNVMGRRCDQCAPGTYGFGVSGCTACNCH 888
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P GS ++ CD + GQC C+ G QC
Sbjct: 889 PDGS--SSHQCDPLTGQCPCRQGAIGRQC 915
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 22/184 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C G C +C Y+ + C C C G+L C+ G C
Sbjct: 1059 GRCLRCLYHTHGQFCSECEPGYHGNAIAQECRRCTCVTAGTLQSACHDGLCHCDPESGAC 1118
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C+ V G CD+C NH++FGE GC+ C+C+P S+ +C+ GQC + G
Sbjct: 1119 PCRENVRGRVCDQCAPNHWNFGEERGCEPCDCDPQNSLGT--HCNMFTGQCH-CRPGFGG 1175
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
+ TE + F G+ + R C HG +L + + G+C C+ G G K
Sbjct: 1176 KTCTEC-----EQFY-WGDPQVECRECNCHV----HGSNLRVCDRTTGQCDCQEGKAGQK 1225
Query: 195 CDRC 198
CD C
Sbjct: 1226 CDEC 1229
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 102/276 (36%), Gaps = 87/276 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGH--CLDCQGDRDGPNCEKCRDNY-------YQKSGD 51
C C G ++ C ++ R H C+ C+ + +G NCE+C+D + +
Sbjct: 342 CFCYGHASECAPVPGVFTRESGMIHGRCV-CKHNTEGLNCERCKDFHKDLPWRPAEAENP 400
Query: 52 NFCTACNCNPIGSLNLQCNSEGRCQCKPG-VTGDKCDRC------------------DVN 92
+ C CNCN G N QC+ + G V+G CD C D N
Sbjct: 401 HTCKECNCN--GHSN-QCHFDMAVYLATGNVSGGVCDNCLHNTVGRNCEMCQPFYYQDPN 457
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
C C+C+P GS G C+S HT+L +
Sbjct: 458 RDVRDPQVCLLCDCDPVGSFDG--------GVCDS---------HTDLDM---------- 490
Query: 153 NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 209
G + G+C+CK V G +CD C V +Y + G
Sbjct: 491 -------------------GMI------AGQCRCKANVKGIRCDDCKVGYYGLSQNDPQG 525
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C C+P G ++ CD + G C CK V G C
Sbjct: 526 CQPCNCDPRGIIRMGDPCDQISGDCSCKRYVTGRYC 561
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 27/224 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C Y G + CTACNC+P GS + QC+ G+C C+ G
Sbjct: 853 GGQC-RCKPNVMGRRCDQCAPGTY-GFGVSGCTACNCHPDGSSSHQCDPLTGQCPCRQGA 910
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +C C + F C+ C+CN + CD G+C + ++ G +
Sbjct: 911 IGRQCSDCQPGQWGF--PSCRRCQCNGHADL-----CDPQTGECRDCRDNAAGH-----Q 958
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS--------EGRCQCKPGVTGD 193
+ KN + C+ P G+ GS + +S + C C G TG
Sbjct: 959 CERCKNGFYGNPVLGSGEHCQPCPCP-GNPGSNHFNGHSCQSDYSANQIICNCNQGYTGS 1017
Query: 194 KCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQC 234
+CD+C +Y E C C+CN + +CD G+C
Sbjct: 1018 RCDQCAPGYYGNPEQPGGQCLPCQCNNNIDPNDPESCDPRTGRC 1061
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
SL CN G+C C+PG G C C+ ++ + C+ C C+ GS N CD
Sbjct: 1155 SLGTHCNMFTGQCHCRPGFGGKTCTECEQFYWGDPQVECRECNCHVHGS--NLRVCDRTT 1212
Query: 232 GQCECKDNVEGAQC 245
GQC+C++ G +C
Sbjct: 1213 GQCDCQEGKAGQKC 1226
>gi|34226|emb|CAA41418.1| laminin A chain [Homo sapiens]
Length = 2628
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 104/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GS + C+ E G C CK
Sbjct: 868 GECLKCLGNTDGAHCERCADGFY---GDAVTAKNCRACECHVKGSHSAVCHLETGLCDCK 924
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC+ C C+ AGSV + C +GQC
Sbjct: 925 PNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--GCTD-EGQCHCVP-------- 973
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC Y G C+ E G C C P
Sbjct: 974 -----------GVAGKRC---DRCAHGFYAYQDGSCTPCDCPHTQNTCDPETGECVCPPH 1019
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ + E GC++C C+ GS + CD V G C+CK G C
Sbjct: 1020 TQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHH--RCDVVTGHCQCKSKFGGRAC 1074
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D K+ N G GG C++C + G NCE C D YY+
Sbjct: 327 CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETCIDGYYRPHKV 386
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C CNC+P+GSL+ C + G+C CK G TG+KCDRC + +
Sbjct: 387 SPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLENGKQPGQCPCKEGYTGEKCDRCQLGYK 446
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
D+ C SC CNP GS + P
Sbjct: 447 DY--PTCVSCGCNPVGSASDEP 466
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG+KCDRC + + D+ C SC CNP GS + P G C CK+NVE
Sbjct: 425 GQCPCKEGYTGEKCDRCQLGYKDY--PTCVSCGCNPVGSASDEP----CTGPCVCKENVE 478
Query: 242 GAQC 245
G C
Sbjct: 479 GKAC 482
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCTACNCNPIGSLN-------LQCNS 71
G C+ C + G +CE+C +Y + GD C C C + N L
Sbjct: 755 GVCIACAHNTTGVHCEQCLPGFYGEPSRGTPGD--CQPCACPLTIASNNFSPTCHLNDGD 812
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
E C C PG +G C+RC +Y C C+C+ +CDSV G+C
Sbjct: 813 EVVCDWCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPSEAGHCDSVTGECLK 872
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ GS + C+ E G C C
Sbjct: 873 CLGNTDG-AHCE---RCADGFYGDAVTAKNCRACECHV-----KGSHSAVCHLETGLCDC 923
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KP VTG +CD+C +Y GC+ C C+ AGSV + C +GQC C V G +C
Sbjct: 924 KPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--GCTD-EGQCHCVPGVAGKRC 980
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 6 FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPI 62
FS C + + H C C +G +CE+C +YY Q G + C C+CNP
Sbjct: 1462 FSPTCVLEGD------HDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGS-CQKCDCNPH 1514
Query: 63 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
GS++ C+ + G+C C+ G +G +CD C+ H E C SC+ G + N
Sbjct: 1515 GSVHGDCDRTSGQCVCRLGASGLRCDECEPRHI-LMETDCVSCDDECVGVLLN 1566
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQCNSEG----RC 75
G CL+C + G +C+ C YY K + D AC +P S + C EG RC
Sbjct: 1417 GKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPASFSPTCVLEGDHDFRC 1476
Query: 76 -QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C G G C+RC ++Y + C+ C+CNP GSV +CD GQC
Sbjct: 1477 DACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTSGQC 1528
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C G CE+C D ++ + C ACNC+ +GS + +C+ G CQCK
Sbjct: 1012 GECV-CPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGHCQCKSKFG 1070
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G C +C + + DF + C C+C+ G+
Sbjct: 1071 GRACVQCSLGYRDFPD--CVPCDCDLRGT 1097
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 176 LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVK 231
L+ + + RC C G G C+RC ++Y + C+ C+CNP GSV +CD
Sbjct: 1468 LEGDHDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTS 1525
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 1526 GQCVCRLGASGLRC 1539
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C+ Y C +C CNP+GS + + G C CK V G CDR
Sbjct: 429 CKEGYTGEKCDRCQLGYKDYPT---CVSCGCNPVGSASDE-PCTGPCVCKENVEGKACDR 484
Query: 89 CDVNHYDFGEA---GCKSCEC 106
C Y+ E GC C C
Sbjct: 485 CKPGFYNLKEKNPRGCSECFC 505
>gi|2599232|gb|AAC53430.1| laminin alpha 5 chain [Mus musculus]
Length = 3635
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ DGP+C++C Y+ G C AC C+P G+L+ QC G C C+PG TG C
Sbjct: 530 CRPGFDGPHCDRCLPGYH---GYPDCHACACDPRGALDQQCGVGGLCHCRPGNTGATCQE 586
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV---HTELRVQSR 145
C Y F C C C+ GS+ T CD GQC R RV H ++ V
Sbjct: 587 CSPGFYGF--PSCIPCHCSADGSLHTT--CDPTTGQCRC-----RPRVTGLHCDMCVPGA 637
Query: 146 KNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD 204
NF C+ + +P G + ++ C C+ V G CDRC ++
Sbjct: 638 YNFP----------YCEAGSCHPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGYWG 687
Query: 205 FGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ GC C C+P G++ C GQC CK +V G C +
Sbjct: 688 LSASNPEGCTRCSCDPRGTLGGVTECQG-NGQCFCKAHVCGKTCAA 732
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 118/290 (40%), Gaps = 76/290 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G + C++D E+ R GG CLDCQ G NCE+C +++
Sbjct: 281 CNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQ 340
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-------- 98
+ C C+C + + GRC C+P TG+ C C + DF
Sbjct: 341 PLDSPHVCRPCDCESDFTDGTCEDLTGRCYCRPNFTGELCAACAEGYTDFPHCYPLPSFP 400
Query: 99 ----------AG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
AG +C+CN AG+ N D G+C + + RG H EL
Sbjct: 401 HNDTREQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRC-VCKPNFRG-AHCEL------- 451
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNSE-GRCQCKPGVTGDKC 195
C P HG G N C+ E G+C C+ G GD+C
Sbjct: 452 -------------CA----PGFHGPSCHPCQCSSPGVANSLCDPESGQCMCRTGFEGDRC 494
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D C + ++ F C+ C C+PAG++ CD G+C+C+ +G C
Sbjct: 495 DHCALGYFHF--PLCQLCGCSPAGTLPE--GCDEA-GRCQCRPGFDGPHC 539
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ +G C+ C Y+ C C C+P G+L C+ GRCQC+PG G
Sbjct: 481 GQCM-CRTGFEGDRCDHCALGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCQCRPGFDG 536
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
CDRC ++ + + C +C C+P G++ C V G C
Sbjct: 537 PHCDRCLPGYHGYPD--CHACACDPRGALDQ--QC-GVGGLCHCR--------------- 576
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC---------QCK--PGVTG 192
GN + C Y G + C+++G QC+ P VTG
Sbjct: 577 -------PGNTGATCQECSPGFY--GFPSCIPCHCSADGSLHTTCDPTTGQCRCRPRVTG 627
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD C Y+F C++ C+PAG P + C C+ +VEG C
Sbjct: 628 LHCDMCVPGAYNF--PYCEAGSCHPAGLAPANPALPETQAPCMCRAHVEGPSC 678
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 109/262 (41%), Gaps = 42/262 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G C+ CQ + +G CE+CR + N C +C
Sbjct: 1782 CQCHGHSDRCLPGS---------GICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSC 1832
Query: 58 NCNPIGSLN-------LQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
C P+ + + N +C C+PG G C+RC + + C+ C+C+
Sbjct: 1833 PC-PLAVPSNNFADGCVLRNGRTQCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDCS 1891
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DT 165
G +CD + G C + G H E + F GN + C R D
Sbjct: 1892 GNGDPNMIFSDCDPLTGACRGCLRHTTGP-HCE---RCAPGF--YGNALLP-GNCTRCDC 1944
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
P G C+ + GRC CK GVTG +CDRC ++ F + GC+ C C PA
Sbjct: 1945 SPCG-----TETCDPQSGRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGS- 1998
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
C GQC C+ G QC
Sbjct: 1999 --ECHPQSGQCHCQPGTTGPQC 2018
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP+CE+C +Y + CT C+C
Sbjct: 1890 CSGNGDPNMIFSDCDPLT-----GACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRCDC 1944
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNC 118
+P G+ S GRC CK GVTG +CDRC ++ F + GC+ C C PA C
Sbjct: 1945 SPCGTETCDPQS-GRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGSE---C 2000
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCKRDTYPLGHGGSLNL 176
GQC H + + + A W L + C+R P GH
Sbjct: 2001 HPQSGQC-----------HCQPGTTGPQCLECAPG-YWGLPEKGCRRCQCPRGH------ 2042
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNH 202
C+ G C C PG++G++CD C H
Sbjct: 2043 -CDPHTGHCTCPPGLSGERCDTCSQQH 2068
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+P V G +CD C Y G C+ C+C+ AG++ + CD + GQC CK+NV+
Sbjct: 1470 GQCRCRPNVAGRRCDTCAPGFY--GYPSCRPCDCHEAGTMASV--CDPLTGQCHCKENVQ 1525
Query: 242 GAQC 245
G++C
Sbjct: 1526 GSRC 1529
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG TG +C C ++ E GC+ C+C P G +CD G C C +
Sbjct: 2005 GQCHCQPGTTGPQCLECAPGYWGLPEKGCRRCQC-PRG------HCDPHTGHCTCPPGLS 2057
Query: 242 GAQC 245
G +C
Sbjct: 2058 GERC 2061
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C+ C +Y G C C+C+ G++ C+ G+C CK V G +CD
Sbjct: 1474 CRPNVAGRRCDTCAPGFY---GYPSCRPCDCHEAGTMASVCDPLTGQCHCKENVQGSRCD 1530
Query: 88 RCDVNHYDFGEAGCKSC 104
+C V + A K C
Sbjct: 1531 QCRVGTFSLDAANPKGC 1547
>gi|410341923|gb|JAA39908.1| laminin, alpha 5 [Pan troglodytes]
Length = 3695
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 602 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 657
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 658 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 707
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G ++ C C+ V G CDR
Sbjct: 708 DTCVPGAYNFP----------YCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDR 757
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+ G++ C GQC CK +V G C S
Sbjct: 758 CKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 810
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1864 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFVSSREDPSAPCVSCP 1914
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1915 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1974
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1975 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGN-------CTRCDCAP 2027
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2028 CGTEA-----CDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS--- 2079
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2080 ECHPQSGQCHCRPGTMGPQCR 2100
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 79/210 (37%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1971 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC 2025
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 2026 APCGTEACDPHS-GHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---C 2081
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G C
Sbjct: 2082 HPQSGQCHCR----------------------PGTMGPQCRECAPGYWGLPEQGCRRCHC 2119
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2120 PGGRCDPHTGRCNCPPGLSGERCDTCSQQH 2149
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G CDR
Sbjct: 562 CRAGFEGATCDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDR 618
Query: 89 CDVNHYDFGEAGCKSCECNPAGSV 112
C ++ F C++C C+P G++
Sbjct: 619 CRPGYHGF--PNCQACTCDPRGAL 640
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1438 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1488
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1489 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1526
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1527 ECNCSGPGVQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1584
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1585 APGV--CDPLTGQCYCKENVQGPRC 1607
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 494 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 550
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL--- 168
+ CD GQC + R F+ A RC + PL
Sbjct: 551 D--RCDPDTGQC-----------------RCRAGFEGA-----TCDRCAPGYFHFPLCQL 586
Query: 169 ---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 587 CGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALDQL- 643
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 644 -CGA-GGLCRCRPGYTGTACQ 662
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C CKP V G
Sbjct: 746 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 805
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 806 QACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 848
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C C P G CD G+C C +
Sbjct: 2086 GQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCHC-PGG------RCDPHTGRCNCPPGLS 2138
Query: 242 GAQC 245
G +C
Sbjct: 2139 GERC 2142
>gi|397479157|ref|XP_003810894.1| PREDICTED: laminin subunit alpha-5, partial [Pan paniscus]
Length = 3640
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 547 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 602
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 603 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 652
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G ++ C C+ V G CDR
Sbjct: 653 DTCVPGAYNFP----------YCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDR 702
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+ G++ C GQC CK +V G C S
Sbjct: 703 CKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 755
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1809 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFVSSREDPSAPCVSCP 1859
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1860 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1919
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1920 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGN-------CTRCDCAP 1972
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 1973 CGTEA-----CDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS--- 2024
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2025 ECHPQSGQCHCRPGTMGPQCR 2045
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 79/210 (37%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1916 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC 1970
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 1971 APCGTEACDPHS-GHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---C 2026
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G C
Sbjct: 2027 HPQSGQCHCR----------------------PGTMGPQCRECAPGYWGLPEQGCRRCHC 2064
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2065 PGGRCDPHTGRCNCPPGLSGERCDTCSQQH 2094
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G CDR
Sbjct: 507 CRAGFEGATCDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDR 563
Query: 89 CDVNHYDFGEAGCKSCECNPAGSV 112
C ++ F C++C C+P G++
Sbjct: 564 CRPGYHGF--PNCQACTCDPRGAL 585
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1383 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1433
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1434 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1471
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1472 ECNCSGPGVQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1529
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1530 APGV--CDPLTGQCYCKENVQGPRC 1552
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 81/204 (39%), Gaps = 49/204 (24%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 439 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 495
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPL 168
+ CD GQC + R F+ A C R +PL
Sbjct: 496 D--RCDPDTGQC-----------------RCRAGFEGA--------TCDRCAPGYFHFPL 528
Query: 169 ------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 529 CQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALD 586
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 587 QL--CGA-GGLCRCRPGYTGTACQ 607
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C CKP V G
Sbjct: 691 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 750
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 751 QACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 793
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C C P G CD G+C C +
Sbjct: 2031 GQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCHC-PGG------RCDPHTGRCNCPPGLS 2083
Query: 242 GAQC 245
G +C
Sbjct: 2084 GERC 2087
>gi|395838437|ref|XP_003792122.1| PREDICTED: laminin subunit alpha-1 [Otolemur garnettii]
Length = 3109
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 106/241 (43%), Gaps = 54/241 (22%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C YY + C CNC+ GS++ C+ EG+C C PGV G+KCD
Sbjct: 956 DCRPHVTGQQCDQCLPGYYGLDSGHGCLPCNCSMAGSMSDDCSDEGQCHCVPGVAGEKCD 1015
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQCESAQLSSRGRVHTELRVQSRK 146
RC Y + + GC C+C ++T N CD G+C
Sbjct: 1016 RCAHGFYAYQDGGCTPCDC------RDTRNSCDPESGEC--------------------- 1048
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCNS-EGRCQCKPGVTG 192
P + + C+ D + GH GS + +C+ G CQCK G
Sbjct: 1049 -ICPPHTQGLECEECEDDHW--GHHPEKGCQACNCSLVGSSSHRCDVLTGHCQCKLEFAG 1105
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD-------SVKGQCECKDNVEGAQC 245
CD+C + + DF C C+C+P G+ +T + D G C CK+NV G QC
Sbjct: 1106 WSCDQCSLGYRDF--PNCVPCDCDPRGTSGDTCDLDQGLCSCAEETGTCSCKENVIGLQC 1163
Query: 246 R 246
R
Sbjct: 1164 R 1164
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 107/237 (45%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ G +CE+C + +Y GD C AC C+ GSL+ C+ E G C C+
Sbjct: 902 GECLKCVGNTGGAHCERCAEGFY---GDAVTAKNCRACECHGKGSLSPMCHLETGLCDCR 958
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC C C+ AGS+ + +C S +GQC
Sbjct: 959 PHVTGQQCDQCLPGYYGLDSGHGCLPCNCSMAGSMSD--DC-SDEGQCHCVP-------- 1007
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG + RC Y GG C+ E G C C P
Sbjct: 1008 -----------GVAGEKC---DRCAHGFYAYQDGGCTPCDCRDTRNSCDPESGECICPPH 1053
Query: 190 VTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +C+ C+ +H+ E GC++C C+ GS ++ CD + G C+CK G C
Sbjct: 1054 TQGLECEECEDDHWGHHPEKGCQACNCSLVGS--SSHRCDVLTGHCQCKLEFAGWSC 1108
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + N+ GG C++C + G NCE C D YY+
Sbjct: 361 CNCHNKAKDCYYDESVANQKRSLNTAGQYIGGGVCINCLQNTTGINCETCLDGYYRPHKV 420
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C C+C+P+GSL+ C + G+C CK G G+KCDRC + +
Sbjct: 421 SPYEDEPCRPCDCDPVGSLSSVCIKDDPHADLHNGKWPGQCPCKEGYAGEKCDRCQLGYK 480
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
++ C C+C+ AGSV + P
Sbjct: 481 NY--PSCVRCDCSTAGSVNDDP 500
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 107/241 (44%), Gaps = 30/241 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLN-------LQCNS 71
H G C+ C + G +CE+C +Y + C C C + + N L
Sbjct: 787 HHGVCIACTHNTTGAHCEQCLPGFYGQPSRGAPGDCQPCACPLVTASNNFSPTCHLNEGE 846
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
E C QC G +G C+RC +Y C C+C+ + +CDSV G+C
Sbjct: 847 EVVCDQCAVGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPREPGHCDSVTGECLK 906
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-GSLNLQCNSE-GRCQ 185
+ + G H E + + F + R C+ HG GSL+ C+ E G C
Sbjct: 907 C-VGNTGGAHCE---RCAEGFYGDAVTAKNCRACE------CHGKGSLSPMCHLETGLCD 956
Query: 186 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
C+P VTG +CD+C +Y GC C C+ AGS+ + +C S +GQC C V G +
Sbjct: 957 CRPHVTGQQCDQCLPGYYGLDSGHGCLPCNCSMAGSMSD--DC-SDEGQCHCVPGVAGEK 1013
Query: 245 C 245
C
Sbjct: 1014 C 1014
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 29 CQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGD 84
C +G CE+C YY Q G + C C+C+P GS++ +C+ + G+C C+PG +G
Sbjct: 1513 CLSGYEGQYCERCSSGYYGNPQMPGGS-CQKCDCSPHGSVHNECDRASGQCMCRPGTSGL 1571
Query: 85 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
+C+ C+ H E C SC+ G + N N D + S L+
Sbjct: 1572 RCEDCEPRH-TLVEGNCVSCDDECVGVLLN--NLDDISDAVLSMNLT 1615
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 25/138 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGD-NFCT 55
C+CN S+ C D E G CL+C + G +C C YY K +GD + CT
Sbjct: 1437 CSCNNHSDTC--DPE-------TGKCLNCSDNTAGDHCHVCAPGYYGKVTGLAGDCSVCT 1487
Query: 56 ACNCNPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
+ +P S + C EG RC C G G C+RC +Y C+ C+C+
Sbjct: 1488 CPHSHP-ASFSPTCVLEGDSDFRCDACLSGYEGQYCERCSSGYYGNPQMPGGSCQKCDCS 1546
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GSV N CD GQC
Sbjct: 1547 PHGSVHN--ECDRASGQC 1562
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 69/176 (39%), Gaps = 56/176 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C G CE+C D+++ + C ACNC+ +GS + +C+ G CQCK
Sbjct: 1046 GECI-CPPHTQGLECEECEDDHWGHHPEKGCQACNCSLVGSSSHRCDVLTGHCQCKLEFA 1104
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C + + DF C C+C+P G+ +T CD +G C
Sbjct: 1105 GWSCDQCSLGYRDF--PNCVPCDCDPRGTSGDT--CDLDQGLCS---------------- 1144
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
C +T G C CK V G +C +C
Sbjct: 1145 ------------------CAEET----------------GTCSCKENVIGLQCRQC 1166
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G+KCDRC + + ++ C C+C+ AGSV + P + C CK++VE
Sbjct: 459 GQCPCKEGYAGEKCDRCQLGYKNY--PSCVRCDCSTAGSVNDDPCTEP----CLCKEHVE 512
Query: 242 GAQC 245
G C
Sbjct: 513 GKDC 516
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 167 PLGHGGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPA 218
P H S + C EG RC C G G C+RC +Y C+ C+C+P
Sbjct: 1489 PHSHPASFSPTCVLEGDSDFRCDACLSGYEGQYCERCSSGYYGNPQMPGGSCQKCDCSPH 1548
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GSV N CD GQC C+ G +C
Sbjct: 1549 GSVHN--ECDRASGQCMCRPGTSGLRC 1573
>gi|327273580|ref|XP_003221558.1| PREDICTED: laminin subunit beta-4-like [Anolis carolinensis]
Length = 1637
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 32/224 (14%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG S C FD +Y N GG C DCQ + +G +C++C+ +Y+ S
Sbjct: 285 CECNGHSESCHFDMAVYLSNNGVSGGVCEDCQHNTEGQHCDQCKLFFYRDPQKAISDPQA 344
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG---EAG 100
C C+C+P G++ + G+C+CK V G +CD+C N+Y G
Sbjct: 345 CIPCDCDPEGTMYNGLCEDHTDPVLGTIAGQCRCKENVEGVRCDKCKPNYYGMSGSDPLG 404
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+SC+CNP+GS+ + C+ V G+C Q ++ H E +Q G+ ++
Sbjct: 405 CQSCDCNPSGSLTFSV-CNPVTGECLCQQFATGQ--HCEECIQGYWGL---GSNLYGCSP 458
Query: 161 CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
C D GG+ N C S G+C+C P + G +C + H+
Sbjct: 459 CDCDI-----GGAYNNLCASTSGQCECLPNIVGRQCTKPASGHF 497
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 94/188 (50%), Gaps = 28/188 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----------NSEG 73
G CL C + GPNC+ C+ Y+ + C C+CN +G+ +C S G
Sbjct: 943 GECLKCLHNTHGPNCQYCKPGYFGSALLKNCKRCDCNLLGTDPAKCVSGEGLCMCDQSTG 1002
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P V G KCD+C +++ + GC SC+CNP S + CD V GQC S +L
Sbjct: 1003 ACSCLPHVIGSKCDQCAPGYWNMTQGIGCHSCDCNPKHSQNSL--CDQVTGQC-SCKLGY 1059
Query: 133 RGRVHTELRVQSRKNF-DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGV 190
GR H + V +F DP + I +C ++ G+L +C+ E G C C+ GV
Sbjct: 1060 TGR-HCD--VCDENSFGDPQIHCIS--CKCNKE-------GTLKPECDKETGACYCRVGV 1107
Query: 191 TGDKCDRC 198
TG CD+C
Sbjct: 1108 TGQFCDQC 1115
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS++ C G +CQCKP V G CD+C + FG GC C+C+P GSV CD V
Sbjct: 730 GSVDTNCEKLGGQCQCKPNVIGRCCDKCSAGSHSFGPQGCLLCDCHPQGSVSAL--CDQV 787
Query: 231 KGQCECKDNVEGAQC 245
GQC C+ V+G QC
Sbjct: 788 TGQCLCRPEVDGQQC 802
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 108/266 (40%), Gaps = 40/266 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C G CLDC+ G +CE+C D YY C C C
Sbjct: 818 CPCNGFAELC---------DSQTGACLDCRDFTTGDSCERCIDGYYGNPLKREPCRPCMC 868
Query: 60 -NPIGSLNLQCNS--------EGRCQCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNP 108
+P S +S + C C G +G++CD C Y +A C C CN
Sbjct: 869 PDPPTSRRYFAHSCYQDHWTMQLVCNCFEGYSGNQCDDCLGGFYGNPKAAGQCLPCSCNN 928
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
+ +C+ G+C ++ G + + P L+ CKR D
Sbjct: 929 NIDEDDPFSCNKDTGECLKCLHNTHG--------PNCQYCKPGYFGSALLKNCKRCDCNL 980
Query: 168 LG-------HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAG 219
LG G L + S G C C P V G KCD+C +++ + GC SC+CNP
Sbjct: 981 LGTDPAKCVSGEGLCMCDQSTGACSCLPHVIGSKCDQCAPGYWNMTQGIGCHSCDCNPKH 1040
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
S + CD V GQC CK G C
Sbjct: 1041 SQNSL--CDQVTGQCSCKLGYTGRHC 1064
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GS++ C G +CQCKP V G CD+C + FG GC C+C+P G
Sbjct: 719 NGAVPCRCHPQGSVDTNCEKLGGQCQCKPNVIGRCCDKCSAGSHSFGPQGCLLCDCHPQG 778
Query: 111 SVKNTPNCDSVKGQC 125
SV CD V GQC
Sbjct: 779 SVSAL--CDQVTGQC 791
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 115/277 (41%), Gaps = 85/277 (30%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNY-------YQK 48
C CNG ++ C +++++ G G CL C+ + DG +CE+C+D Y +
Sbjct: 218 CFCNGHASSCGPVPNVRGDVFHQPGMVHGSCL-CEHNTDGLSCERCKDFYNDAPWRPAEG 276
Query: 49 SGDNFCTACNCNPIG-------SLNLQCN--SEGRCQ-CKPGVTGDKCDRCDVNHY-DFG 97
S +N C C CN ++ L N S G C+ C+ G CD+C + Y D
Sbjct: 277 SLENACQKCECNGHSESCHFDMAVYLSNNGVSGGVCEDCQHNTEGQHCDQCKLFFYRDPQ 336
Query: 98 EA-----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
+A C C+C+P G++ N G CE HT DP
Sbjct: 337 KAISDPQACIPCDCDPEGTMYN--------GLCED---------HT----------DPVL 369
Query: 153 NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG---EAG 209
I G+C+CK V G +CD+C N+Y G
Sbjct: 370 GTI-------------------------AGQCRCKENVEGVRCDKCKPNYYGMSGSDPLG 404
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C+SC+CNP+GS+ + C+ V G+C C+ G C
Sbjct: 405 CQSCDCNPSGSLTFSV-CNPVTGECLCQQFATGQHCE 440
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG CD CD N + + C SC+CN G++K P CD G C C+ V
Sbjct: 1051 GQCSCKLGYTGRHCDVCDENSFGDPQIHCISCKCNKEGTLK--PECDKETGACYCRVGVT 1108
Query: 242 GAQC 245
G C
Sbjct: 1109 GQFC 1112
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 102/240 (42%), Gaps = 37/240 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C+KC + G C C+C+P GS++ C+ G+C C+P V
Sbjct: 740 GGQC-QCKPNVIGRCCDKCSAGSH-SFGPQGCLLCDCHPQGSVSALCDQVTGQCLCRPEV 797
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSS 132
G +C RC + FG C+ C CN + CDS G C +S +
Sbjct: 798 DGQQCSRCLAGY--FGFPHCRPCPCNGFAEL-----CDSQTGACLDCRDFTTGDSCERCI 850
Query: 133 RGRVHTELRVQSRKN---FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG 189
G L+ + + DP +R + C +D + ++ L CN C G
Sbjct: 851 DGYYGNPLKREPCRPCMCPDPPTSRRYFAHSCYQDHW------TMQLVCN------CFEG 898
Query: 190 VTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+G++CD C Y +A C C CN + +C+ G+C +C N G C+
Sbjct: 899 YSGNQCDDCLGGFYGNPKAAGQCLPCSCNNNIDEDDPFSCNKDTGECLKCLHNTHGPNCQ 958
>gi|327269871|ref|XP_003219716.1| PREDICTED: laminin subunit alpha-3-like [Anolis carolinensis]
Length = 3173
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 105/262 (40%), Gaps = 67/262 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D E+ R GG C+DCQ + G NCE+C YY+ G
Sbjct: 362 CNCHGHATDCYYDPEIEQRKASLNIYGEYQGGGVCIDCQHNTAGVNCERCVKGYYRPYGV 421
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C CNC+P S + S GRC CK G+ CD C ++ F C
Sbjct: 422 PVTAAHGCIPCNCSPEHSDGCEEGS-GRCYCKLNYQGENCDECADGYHSF--PFCYWIPV 478
Query: 107 NPA--GSVKNTPNCDSVKG-QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
P + K P+ +KG +C A
Sbjct: 479 YPVITPAPKEDPSAGHIKGCECNLA----------------------------------- 503
Query: 164 DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
G+L + +GRC C+ V G KC +C +Y + C C C+P GS N
Sbjct: 504 --------GTLPEMYDFQGRCLCRSEVDGPKCSQCAAGYYSY--PSCFPCRCSPQGS--N 551
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+CD GQCEC+ V G QC
Sbjct: 552 QESCDPATGQCECRPGVSGQQC 573
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 107/244 (43%), Gaps = 58/244 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ + DGP C +C YY C C C+P GS C+ + G+C+C+PGV+
Sbjct: 514 GRCL-CRSEVDGPKCSQCAAGYYSYPS---CFPCRCSPQGSNQESCDPATGQCECRPGVS 569
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC F + EC+PAG+V DS C+ Q
Sbjct: 570 GQQCDRCLSADKHFPYCHGTNHECDPAGAV------DSYSDYCQCLQ------------- 610
Query: 143 QSRKNFDPAGNRI-----WDLRRCKRDTYPLGHGGSLNLQCNS-------------EGRC 184
N + I W+L R + G + QCN+ +G C
Sbjct: 611 ----NVEGPTCSICKPIYWNLARENPE-------GCVECQCNASGTLSGVRECQQVDGEC 659
Query: 185 QCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
CKP V GD CD C+ +Y GC+ CEC+ GSV CD + G C+C++++
Sbjct: 660 YCKPNVCGDSCDMCEDGYYGLEAKNYFGCQGCECDVGGSVSQV--CDDLSGDCQCRNHMV 717
Query: 242 GAQC 245
G C
Sbjct: 718 GKNC 721
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 94/198 (47%), Gaps = 25/198 (12%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N CNC+ G+ + C+ G +C CK + G +C+RC +Y F CK C C
Sbjct: 1249 NNGALPCNCHRNGAASPTCDPMGGQCPCKQNIIGLQCNRCRTGYYGF--PFCKPCRCG-- 1304
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
CD + G+C + + R E+ V+ + P L C +
Sbjct: 1305 -----WRLCDDITGKCICPPQTVKPR--CEVCVRQHFGYHP-------LVGCVGCNCSSQ 1350
Query: 169 GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G ++N +C+ + G+C+C+ G+TG +CD+C FG CK C CN G+ N C
Sbjct: 1351 GVVNAVNPECDKKNGQCRCRSGITGRRCDQCAPG--SFGFPNCKPCNCNRGGTEPNV--C 1406
Query: 228 DSVKGQCECKDNVEGAQC 245
D G C CK+NVEG QC
Sbjct: 1407 DPQTGVCLCKENVEGIQC 1424
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC- 59
CNCNG S+RC G CL+CQ + G NCE CR+ Y+ + C AC C
Sbjct: 1678 CNCNGNSDRCL---------DGSGICLNCQHNTAGDNCEYCREGYFGDASQGNCRACRCP 1728
Query: 60 --NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
N S ++ + + +C C+ G TG C+ C ++ +G C+ C C G +
Sbjct: 1729 YTNSFASGCIENDGDIQCFCREGYTGVHCESCAPGYFGNPLKYG-GFCQKCNCPNNGQL- 1786
Query: 114 NTPNCDSVKGQC 125
PNCD + G+C
Sbjct: 1787 --PNCDRLTGEC 1796
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNP---IGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 91
P CE C ++ C CNC+ + ++N +C+ + G+C+C+ G+TG +CD+C
Sbjct: 1324 PRCEVCVRQHFGYHPLVGCVGCNCSSQGVVNAVNPECDKKNGQCRCRSGITGRRCDQCAP 1383
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
FG CK C CN G+ N CD G C
Sbjct: 1384 G--SFGFPNCKPCNCNRGGTEPNV--CDPQTGVC 1413
>gi|392341097|ref|XP_003754246.1| PREDICTED: laminin subunit beta-1, partial [Rattus norvegicus]
Length = 1772
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 396 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 455
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G++CD C YD G
Sbjct: 456 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPFG 515
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R Q N + R
Sbjct: 516 CKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-----QCLPQHWGLSNDLDGCRP 570
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 571 CDCDL-----GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 609
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 811 PMTDVCRNIIFSISALIHQAGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 870
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK C+C+ GSV + CD+V GQC
Sbjct: 871 TFGFGPNGCKPCDCHLQGSV--SAFCDAVTGQC 901
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C + G NC++C + +Q + C CNCN + S CN G+CQC PG G C
Sbjct: 1042 CLPNVIGQNCDRCAPHTWQLASGTGCEPCNCNAVHSFGPSCNEFTGQCQCMPGFGGRTCS 1101
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
C + + C++C+C+P G TP CD GQC
Sbjct: 1102 ECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQC 1137
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 95/293 (32%), Gaps = 120/293 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG + C G CL CQ G NCE+C YY
Sbjct: 928 CQCNGHAEDC---------DTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPC 978
Query: 47 -----QKSGDNFCTACN--------------------CNPIGSLNLQCN--------SEG 73
SG F +C CN +G++ CN + G
Sbjct: 979 PCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIECVCNYLGTVREHCNGSDCHCDKTTG 1038
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
+C C P V G CDRC + + GC+ C NC++V
Sbjct: 1039 QCSCLPNVIGQNCDRCAPHTWQLASGTGCEPC------------NCNAVH---------- 1076
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
+F P+ N G+CQC PG G
Sbjct: 1077 --------------SFGPSCNEF-------------------------TGQCQCMPGFGG 1097
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1098 RTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1148
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 108/266 (40%), Gaps = 58/266 (21%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS++ C++ G+C C G+
Sbjct: 850 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPNGCKPCDCHLQGSVSAFCDAVTGQCHCFQGI 907
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC + F C+ C+CN + +CD+V G+C S Q + G H R
Sbjct: 908 YARQCDRCLPGFWGF--PSCQPCQCN-----GHAEDCDTVTGECLSCQDYTTG--HNCER 958
Query: 142 VQSRKNFDP------------------AGNRIWDLRRCKRDTYPL--------------- 168
+ DP +G + R C +D L
Sbjct: 959 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQF--ARSCYQDPVTLQLACVCDPGYIECVC 1016
Query: 169 GHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAG 219
+ G++ CN + G+C C P V G CDRC + + GC+ C CN
Sbjct: 1017 NYLGTVREHCNGSDCHCDKTTGQCSCLPNVIGQNCDRCAPHTWQLASGTGCEPCNCNAVH 1076
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
S P+C+ GQC+C G C
Sbjct: 1077 SFG--PSCNEFTGQCQCMPGFGGRTC 1100
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GSV + CD+V
Sbjct: 840 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSV--SAFCDAV 897
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 898 TGQCHCFQGIYARQC 912
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
G C +C++ ++ D C AC+C+P G QC+ S G+C C GV G +CD+C
Sbjct: 1097 GRTCSECQELFW-GDPDVECRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKC 1151
>gi|395505613|ref|XP_003757134.1| PREDICTED: multiple epidermal growth factor-like domains protein 9
[Sarcophilus harrisii]
Length = 642
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 28 DCQGDRDGPNCEKCRDNYYQK--SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDK 85
+C G +C+ C +++Y S C +C CN G+ +L C+S G+CQCK GV G K
Sbjct: 263 ECLPGYKGLHCDSCEESFYPAGTSVQGLCLSCGCNLHGATSLICSSSGKCQCKIGVGGSK 322
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CDRC +Y F E GC C+CN + CD+ G C + Q +SRG H E +
Sbjct: 323 CDRCQDGYYGFSENGCLPCQCN-----NQSVTCDAFSGTCLNCQGNSRGD-HCE---GCK 373
Query: 146 KNFDPAGNRIWDLRRCKRDTYP-----LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
F + RC H G L +C+ QCK G TG C+ C+
Sbjct: 374 NGFYKSPTAFHKCLRCPCSAVTSTGSCFIHSGELVPKCD-----QCKEGYTGPNCNVCEN 428
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
+Y+ ++ C CEC TP C G+C +C N G C
Sbjct: 429 GYYN-SDSICVKCECGGHVDSNKTPKICKPESGECIDCLHNTTGFHCE 475
>gi|268552863|ref|XP_002634414.1| C. briggsae CBR-EPI-1 protein [Caenorhabditis briggsae]
Length = 3710
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 134/306 (43%), Gaps = 82/306 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS----------- 49
C CNG S C D G C DC+ + G +CE C + +Y +
Sbjct: 1830 CECNGHSATCDPDT---------GICTDCEHNTHGDHCEFCDEGHYGNATNGSPYDCMAC 1880
Query: 50 ------GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE----- 98
+NF +C+ + G L LQCN CKPG TGD+CDRCD + FG+
Sbjct: 1881 ACPFAPSNNFAKSCDVSEEGQL-LQCN------CKPGYTGDRCDRCDAGY--FGQPQQVG 1931
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ-------SRKNF--- 148
C+ C+CN ++ ++ C V G C + ++ GR H E Q S KN
Sbjct: 1932 GSCEPCQCNGNNNLTDSRACHPVSGDCYLCEQNTDGR-HCEWCAQWFYGDAVSAKNCSSC 1990
Query: 149 --DPAGNRIWDLR----------------RCKRDTYPLGH----------GGSLNLQCNS 180
D G++ D R RCK D + + N QCN
Sbjct: 1991 ECDQCGSQYCDNRSGGCECKTNVEGDSCDRCKPDHWGFSKCQGCQACHCGTAAFNTQCNV 2050
Query: 181 E-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
E G+C C+PG +G +C++C+ ++++GE GC C+C S+ CD GQC C++
Sbjct: 2051 ENGQCTCRPGASGMRCEQCEHGYWNYGEHGCDKCDCESDLSMGTV--CDVRTGQCHCQEG 2108
Query: 240 VEGAQC 245
G++C
Sbjct: 2109 ATGSRC 2114
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 32/229 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C G+ G C+KC +Y C C C G+ C+++G+C CK G++CDR
Sbjct: 631 CNGNFTGRTCDKCAAGFYNYPD---CRGCECLVAGAKGQTCDNQGQCYCKGNFEGERCDR 687
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C N Y+F C+ C CNP+G ++ CD V G+ S + GR+
Sbjct: 688 CKPNFYNF--PICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRI----------- 734
Query: 148 FDPAGNRIWDL--------RRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
D WDL R C+ +T G LN G+C CK G CD+C
Sbjct: 735 CDQCKPTFWDLQYHHEDGCRSCECNTN--GTISGLNTCDLKSGQCMCKKNAAGRTCDQCA 792
Query: 200 VNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y + + GC+SC C+ G+++ CD GQC+C+ V G +C
Sbjct: 793 EGFYRLNSYNQLGCESCHCDIGGALR--AECDINSGQCKCRPRVTGLRC 839
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 103/217 (47%), Gaps = 37/217 (17%)
Query: 41 CRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
C+ + + D + +C+C GS + QC G +C+CKP V G +C+RC +Y+F
Sbjct: 1397 CKQKIFSLTTDFNSAALSCDCVAQGSESFQCEEYGGQCKCKPNVIGRRCERCAPGYYNFP 1456
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR-----VQSRKNFDPAG 152
E C C CN AG CD GQC H E + V + +DP
Sbjct: 1457 E--CIKCSCN-AGQ-----QCDERTGQCFCPP-------HVEGQSCDRCVSNAFGYDP-- 1499
Query: 153 NRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
L C++ +P G G NL C+ E G+C C+ + G +CDRC Y F C
Sbjct: 1500 -----LIGCQKCGCHPQGSEGG-NLVCDPESGQCLCRESMGGRQCDRCLAGFYGFPH--C 1551
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C CN G+ + CD+ QC+CK+NV GA+C +
Sbjct: 1552 YGCSCNRDGTTEEI--CDATNAQCKCKENVYGARCEA 1586
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 91/199 (45%), Gaps = 51/199 (25%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQ----CNSEGRCQCKPGV 81
C+G+ +G C++C+ N+Y NF C CNCNP G + + Q + C C+ V
Sbjct: 676 CKGNFEGERCDRCKPNFY-----NFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHV 730
Query: 82 TGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TG CD+C +D E GC+SCECN G++ CD GQC
Sbjct: 731 TGRICDQCKPTFWDLQYHHEDGCRSCECNTNGTISGLNTCDLKSGQC------------- 777
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-------------GGSLNLQCN-SEGRC 184
+KN A R D +C Y L GG+L +C+ + G+C
Sbjct: 778 ----MCKKN---AAGRTCD--QCAEGFYRLNSYNQLGCESCHCDIGGALRAECDINSGQC 828
Query: 185 QCKPGVTGDKCDRCDVNHY 203
+C+P VTG +CDR NHY
Sbjct: 829 KCRPRVTGLRCDRPIENHY 847
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 106/239 (44%), Gaps = 48/239 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ G C++C YY G C AC C+ G + +C+S G+C C T
Sbjct: 581 GQCL-CKEGFAGDKCDRCDIAYY---GYPNCKACACDGAGITSPECDSTSGQCPCNGNFT 636
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C Y++ + C+ CEC AG+ T CD+ +GQC
Sbjct: 637 GRTCDKCAAGFYNYPD--CRGCECLVAGAKGQT--CDN-QGQC----------------- 674
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTY--PL-------GHGGSLNLQ----CNSEGRCQCKPG 189
+ NF+ G R RCK + Y P+ G + + Q + C C+
Sbjct: 675 YCKGNFE--GER---CDRCKPNFYNFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKH 729
Query: 190 VTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG CD+C +D E GC+SCECN G++ CD GQC CK N G C
Sbjct: 730 VTGRICDQCKPTFWDLQYHHEDGCRSCECNTNGTISGLNTCDLKSGQCMCKKNAAGRTC 788
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 18/139 (12%)
Query: 1 CNCNGFSNRCFFDKEL-YNRTGH--------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC G SN C++D+++ N+ GG C++C+ + +G NC KC Y++ +G
Sbjct: 357 CNCFGRSNECYYDEQVDLNKQSMDSKGNYEGGGVCVNCRDNTEGINCNKCSYGYFRPAGV 416
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C AC+C+P G+C+C+ G+ CD+C + +YD E CK CEC
Sbjct: 417 TWDEPQPCKACDCDPDKHTGSCAEETGKCECQARFVGENCDQCALGYYDPPE--CKPCEC 474
Query: 107 NPAGSVKNTPNCDSVKGQC 125
G+V + C GQC
Sbjct: 475 FVNGTVGDV--CLPEDGQC 491
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 89/194 (45%), Gaps = 19/194 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
G C C+ + DG +CE C +Y S N C++C C+ GS N G C+CK V
Sbjct: 1956 GDCYLCEQNTDGRHCEWCAQWFYGDAVSAKN-CSSCECDQCGSQYCD-NRSGGCECKTNV 2013
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
GD CDRC +H+ F + GC++C C G+ C+ GQC +S R
Sbjct: 2014 EGDSCDRCKPDHWGFSKCQGCQACHC---GTAAFNTQCNVENGQCTCRPGASGMRCE--- 2067
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
Q + G D C+ D L G +++ G+C C+ G TG +CD+C
Sbjct: 2068 --QCEHGYWNYGEHGCDKCDCESD---LSMGTVCDVRT---GQCHCQEGATGSRCDQCLP 2119
Query: 201 NHYDFGEAGCKSCE 214
++ GC+ C+
Sbjct: 2120 SYLRIPTHGCRRCD 2133
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 83/210 (39%), Gaps = 48/210 (22%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCK 78
+GG C C+ + G CE+C YY NF C C+CN QC+ G+C C
Sbjct: 1430 YGGQC-KCKPNVIGRRCERCAPGYY-----NFPECIKCSCNA----GQQCDERTGQCFCP 1479
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CDRC N + + GC+ C C+P GS CD GQC +
Sbjct: 1480 PHVEGQSCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRE-------- 1531
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH--------GGSLNLQCNSE-GRCQCKP 188
G R D RC Y H G+ C++ +C+CK
Sbjct: 1532 ------------SMGGRQCD--RCLAGFYGFPHCYGCSCNRDGTTEEICDATNAQCKCKE 1577
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
V G +C+ C +D GC +C C
Sbjct: 1578 NVYGARCEACKAGTFDLSAENPLGCVNCFC 1607
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPG 80
G C+ C+ + G C++C + +Y+ + N C +C+C+ G+L +C+ + G+C+C+P
Sbjct: 775 GQCM-CKKNAAGRTCDQCAEGFYRLNSYNQLGCESCHCDIGGALRAECDINSGQCKCRPR 833
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR-VHTE 139
VTG +CDR NHY F E A + P +V + + + S RG V +
Sbjct: 834 VTGLRCDRPIENHY-FPTLWHNQYEAEDAHTEDQRPVRFAVDPE-QFSNFSWRGYAVFSP 891
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
++ + + D A ++ L R+ P+ ++++
Sbjct: 892 IQEKILIDVDIAKASVYRLLFRYRNPTPVPITATVSV 928
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 89/233 (38%), Gaps = 75/233 (32%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVTG 83
C GP+C+ C Y++ S +F C C CN + C+ + G C C+ G
Sbjct: 1799 CPAPYTGPSCQLCASGYHRVSSGSFLGACVPCECN---GHSATCDPDTGICTDCEHNTHG 1855
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
D C+ CD HY G C +C C A S +CD +S G++
Sbjct: 1856 DHCEFCDEGHYGNATNGSPYDCMACACPFAPSNNFAKSCD----------VSEEGQL--- 1902
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
LQCN CKPG TGD+CDRCD
Sbjct: 1903 ------------------------------------LQCN------CKPGYTGDRCDRCD 1920
Query: 200 VNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQCR 246
+ FG+ C+ C+CN ++ ++ C V G C C+ N +G C
Sbjct: 1921 AGY--FGQPQQVGGSCEPCQCNGNNNLTDSRACHPVSGDCYLCEQNTDGRHCE 1971
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 148 FDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF 205
F PAG + + CK D P H GS C E G+C+C+ G+ CD+C + +YD
Sbjct: 411 FRPAGVTWDEPQPCKACDCDPDKHTGS----CAEETGKCECQARFVGENCDQCALGYYDP 466
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
E CK CEC G+V + C GQC CK G C
Sbjct: 467 PE--CKPCECFVNGTVGDV--CLPEDGQCPCKPGFGGTFC 502
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNP---IGSLNLQCNSEGRCQCK 78
G C+ G C++C+ ++ Q ++ C +C CN I LN G+C CK
Sbjct: 721 GELCSCRKHVTGRICDQCKPTFWDLQYHHEDGCRSCECNTNGTISGLNTCDLKSGQCMCK 780
Query: 79 PGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G CD+C Y + + GC+SC C+ G+++ CD GQC+
Sbjct: 781 KNAAGRTCDQCAEGFYRLNSYNQLGCESCHCDIGGALR--AECDINSGQCK 829
>gi|410219770|gb|JAA07104.1| laminin, alpha 5 [Pan troglodytes]
gi|410251710|gb|JAA13822.1| laminin, alpha 5 [Pan troglodytes]
Length = 3695
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 602 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 657
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 658 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 707
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G ++ C C+ V G CDR
Sbjct: 708 DTCVPGAYNFP----------YCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDR 757
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+ G++ C GQC CK +V G C S
Sbjct: 758 CKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 810
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1864 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFVSSREDPSAPCVSCP 1914
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1915 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1974
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1975 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGN-------CTRCDCAP 2027
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2028 CGTEA-----CDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS--- 2079
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2080 ECHPQSGQCHCRPGTMGPQCR 2100
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 79/210 (37%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1971 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC 2025
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 2026 APCGTEACDPHS-GHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---C 2081
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G C
Sbjct: 2082 HPQSGQCHCR----------------------PGTMGPQCRECAPGYWGLPEQGCRRCHC 2119
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2120 PGGRCDPHTGRCNCPPGLSGERCDTCSQQH 2149
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G CDR
Sbjct: 562 CRAGFEGATCDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDR 618
Query: 89 CDVNHYDFGEAGCKSCECNPAGSV 112
C ++ F C++C C+P G++
Sbjct: 619 CRPGYHGF--PNCQACTCDPRGAL 640
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1438 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1488
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1489 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1526
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1527 ECNCSGPGVQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1584
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1585 APGV--CDPLTGQCYCKENVQGPRC 1607
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 494 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 550
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL--- 168
+ CD GQC + R F+ A RC + PL
Sbjct: 551 D--RCDPDTGQC-----------------RCRAGFEGA-----TCDRCAPGYFHFPLCQL 586
Query: 169 ---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 587 CGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALDQL- 643
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 644 -CGA-GGLCRCRPGYTGTACQ 662
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C CKP V G
Sbjct: 746 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 805
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 806 QACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 848
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C C P G CD G+C C +
Sbjct: 2086 GQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCHC-PGG------RCDPHTGRCNCPPGLS 2138
Query: 242 GAQC 245
G +C
Sbjct: 2139 GERC 2142
>gi|443732359|gb|ELU17115.1| hypothetical protein CAPTEDRAFT_183991 [Capitella teleta]
Length = 1756
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 107/267 (40%), Gaps = 84/267 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+ + RC FD +Y +TG GG C DCQ + G NC++C+ ++Q G +
Sbjct: 325 CECHNHATRCHFDPAVYEQTGRVSGGVCDDCQHNTRGRNCDECKPFFFQDPGRDLRDPSV 384
Query: 54 CTACNCNPIGS-LNLQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P GS N +C S GRC CK V G +CDRC N++ G
Sbjct: 385 CQPCDCDPFGSEHNGECESLSDPEHDLVAGRCLCKRFVEGTRCDRCVANYWQLDAGNPDG 444
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CK C C+ G++ N CD G C R
Sbjct: 445 CKPCSCSQLGTIGNY-GCDQQTGLC----------------------------------R 469
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPA 218
CKR VTG CD C + + GC C+CN
Sbjct: 470 CKR-------------------------FVTGRTCDECLPEFFGLSDDDDGCNPCDCNLG 504
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS N CD GQCEC+ ++ G +C
Sbjct: 505 GSTSN--RCDQQTGQCECRPHMIGRRC 529
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL--QCNSE-GRCQCKPG 80
G CL C +G +CE+C N++ + C C CN +G+ C+ E G+C C
Sbjct: 976 GECLKCLYHTEGFHCERCEANFFGDASIQNCQQCVCNILGTDRDAGHCDRETGQCPCLQN 1035
Query: 81 VTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G CDRC NH+ +GC++C C+P G++ N C+ GQC + GR
Sbjct: 1036 VVGQSCDRCAPNHWKIASGSGCEACACDPDGALSN--QCNEFNGQCRCRE----GR---- 1085
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
++ + W + GS QC+ + G+C C GVTG KCDRC
Sbjct: 1086 ----GGRDCSECPDLYWGNPEVQCIPCDCDPDGSSTNQCDRQTGQCPCIEGVTGYKCDRC 1141
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 111/268 (41%), Gaps = 49/268 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTAC 57
C+CNG S C G C C R G NCE+C YY G C AC
Sbjct: 849 CHCNGLSETC----------DDYGRCDACVEHRGGDNCEQCEYGYYGDPAPGSALGCRAC 898
Query: 58 NCNPIGS-----------LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKS 103
C P G+ L+ + N + C C G G+ C RC N++ C
Sbjct: 899 MC-PGGAGSGYQHGSTCRLDTRTN-DVVCNCATGYAGNDCRRCAENYHGNPLMPGGSCVP 956
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR----IWDLR 159
C+CN + +C++ G+C + G H E R ++ D + + ++
Sbjct: 957 CQCNGNIATDVPGSCNAANGECLKCLYHTEG-FHCE-RCEANFFGDASIQNCQQCVCNIL 1014
Query: 160 RCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNP 217
RD GH C+ E G+C C V G CDRC NH+ +GC++C C+P
Sbjct: 1015 GTDRDA---GH-------CDRETGQCPCLQNVVGQSCDRCAPNHWKIASGSGCEACACDP 1064
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ N C+ GQC C++ G C
Sbjct: 1065 DGALSN--QCNEFNGQCRCREGRGGRDC 1090
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 113/279 (40%), Gaps = 62/279 (22%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
GG C +C+ + G C++C Y G N C CNC+ +G+ N CN+E G+C+C P
Sbjct: 770 QGGDC-ECKSNVIGRKCDQCSPGTY-GFGPNGCQPCNCHSVGARNNLCNAETGQCECIPN 827
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV-KNTPNCDSVKG--------QCESAQL- 130
G +C C Y F C+ C CN + CD+ QCE
Sbjct: 828 AFGRECGSCRRGFYGF--PSCQQCHCNGLSETCDDYGRCDACVEHRGGDNCEQCEYGYYG 885
Query: 131 ------------------SSRGRVH-TELRVQSRKN-------FDPAGNRIWDLRRCKRD 164
+ G H + R+ +R N AGN D RRC +
Sbjct: 886 DPAPGSALGCRACMCPGGAGSGYQHGSTCRLDTRTNDVVCNCATGYAGN---DCRRCAEN 942
Query: 165 TY--PLGHGGS-LNLQCN-------------SEGRC-QCKPGVTGDKCDRCDVNHY-DFG 206
+ PL GGS + QCN + G C +C G C+RC+ N + D
Sbjct: 943 YHGNPLMPGGSCVPCQCNGNIATDVPGSCNAANGECLKCLYHTEGFHCERCEANFFGDAS 1002
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C CN G+ ++ +CD GQC C NV G C
Sbjct: 1003 IQNCQQCVCNILGTDRDAGHCDRETGQCPCLQNVVGQSC 1041
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ CN +G C+CK V G KCD+C Y FG GC+ C C+ G+ N C++
Sbjct: 761 GSLSNVCNPQGGDCECKSNVIGRKCDQCSPGTYGFGPNGCQPCNCHSVGARNNL--CNAE 818
Query: 231 KGQCECKDNVEGAQCRS 247
GQCEC N G +C S
Sbjct: 819 TGQCECIPNAFGRECGS 835
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 96/230 (41%), Gaps = 43/230 (18%)
Query: 35 GPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNL--QCNSE-GRC-QCKPGVTGDKCDR 88
G +C +C +NY+ C C CN + ++ CN+ G C +C G C+R
Sbjct: 933 GNDCRRCAENYHGNPLMPGGSCVPCQCNGNIATDVPGSCNAANGECLKCLYHTEGFHCER 992
Query: 89 CDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
C+ N + D C+ C CN G+ ++ +CD GQC Q
Sbjct: 993 CEANFFGDASIQNCQQCVCNILGTDRDAGHCDRETGQCPCLQ------------------ 1034
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS-EGRCQCKPGVTGDKC 195
+ G RC + + + G G+L+ QCN G+C+C+ G G C
Sbjct: 1035 -NVVGQ---SCDRCAPNHWKIASGSGCEACACDPDGALSNQCNEFNGQCRCREGRGGRDC 1090
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C ++ E C C+C+P GS N CD GQC C + V G +C
Sbjct: 1091 SECPDLYWGNPEVQCIPCDCDPDGSSTN--QCDRQTGQCPCIEGVTGYKC 1138
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 99/281 (35%), Gaps = 99/281 (35%)
Query: 1 CNCNGFSNRCF-FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY-------YQKSGDN 52
C+C G ++RC D + N G C +C + G NCE+C D Y ++ N
Sbjct: 262 CSCYGHASRCLPLDGQENNPKMVHGRC-ECTHNTKGLNCEQCEDFYNDLPWRPARRRETN 320
Query: 53 FCTACNCNPIGSLNLQCNSEGRCQCKPGV-------TGDKCDRCDVNH----------YD 95
C C C+ N RC P V +G CD C N +
Sbjct: 321 ACKKCECH---------NHATRCHFDPAVYEQTGRVSGGVCDDCQHNTRGRNCDECKPFF 371
Query: 96 FGEAG--------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
F + G C+ C+C+P GS N G+CES
Sbjct: 372 FQDPGRDLRDPSVCQPCDCDPFGSEHN--------GECESLS------------------ 405
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
DP + + GRC CK V G +CDRC N++
Sbjct: 406 -DPEHDLV-------------------------AGRCLCKRFVEGTRCDRCVANYWQLDA 439
Query: 208 A---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GCK C C+ G++ N CD G C CK V G C
Sbjct: 440 GNPDGCKPCSCSQLGTIGNY-GCDQQTGLCRCKRFVTGRTC 479
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDV 91
GP + C + S + A C C+ GSL+ CN +G C+CK V G KCD+C
Sbjct: 731 GPTSDICLNLIITISSGIYERAFDCACDQTGSLSNVCNPQGGDCECKSNVIGRKCDQCSP 790
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
Y FG GC+ C C+ G+ N C++ GQCE
Sbjct: 791 GTYGFGPNGCQPCNCHSVGARNNL--CNAETGQCE 823
>gi|410296062|gb|JAA26631.1| laminin, alpha 5 [Pan troglodytes]
Length = 3695
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 602 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 657
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 658 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 707
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G ++ C C+ V G CDR
Sbjct: 708 DTCVPGAYNFP----------YCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDR 757
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+ G++ C GQC CK +V G C S
Sbjct: 758 CKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 810
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1864 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFVSSREDPSAPCVSCP 1914
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1915 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1974
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1975 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGN-------CTRCDCAP 2027
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2028 CGTEA-----CDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS--- 2079
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2080 ECHPQSGQCHCRPGTMGPQCR 2100
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 79/210 (37%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1971 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC 2025
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 2026 APCGTEACDPHS-GHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---C 2081
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G C
Sbjct: 2082 HPQSGQCHCR----------------------PGTMGPQCRECAPGYWGLPEQGCRRCHC 2119
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2120 PGGRCDPHTGRCNCPPGLSGERCDTCSQQH 2149
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G CDR
Sbjct: 562 CRAGFEGATCDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDR 618
Query: 89 CDVNHYDFGEAGCKSCECNPAGSV 112
C ++ F C++C C+P G++
Sbjct: 619 CRPGYHGF--PNCQACTCDPRGAL 640
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1438 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1488
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1489 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1526
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1527 ECNCSGPGVQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1584
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1585 APGV--CDPLTGQCYCKENVQGPRC 1607
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 494 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 550
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL--- 168
+ CD GQC + R F+ A RC + PL
Sbjct: 551 D--RCDPDTGQC-----------------RCRAGFEGA-----TCDRCAPGYFHFPLCQL 586
Query: 169 ---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 587 CGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALDQL- 643
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 644 -CGA-GGLCRCRPGYTGTACQ 662
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C CKP V G
Sbjct: 746 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 805
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 806 QACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 848
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C C P G CD G+C C +
Sbjct: 2086 GQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCHC-PGG------RCDPHTGRCNCPPGLS 2138
Query: 242 GAQC 245
G +C
Sbjct: 2139 GERC 2142
>gi|170035629|ref|XP_001845671.1| laminin subunit alpha [Culex quinquefasciatus]
gi|167877644|gb|EDS41027.1| laminin subunit alpha [Culex quinquefasciatus]
Length = 3706
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 99/230 (43%), Gaps = 34/230 (14%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C C YYQ C CNC+ GS+ L CN+EG+CQC G C++
Sbjct: 614 CLSNFSGRQCTMCMPGYYQYPE---CLPCNCDTHGSIGLSCNTEGQCQCAYNFDGKTCNQ 670
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQS 144
C Y+F C+ C C+PAG + C SV QC+ RVQ
Sbjct: 671 CKEGFYNF--PACEECNCDPAGVIAKFAGCGSVPAGELCQCKE-------------RVQG 715
Query: 145 RKNFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
R D W+L + + G G+L+ G+C CKP VTG +C C
Sbjct: 716 RIC-DKCRPLYWNLNASNPHGCEDCECFIDGTIGALDTCDTKSGQCACKPSVTGRQCSEC 774
Query: 199 DVNHYD-FGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D FG + GCK C C+ GS N C+ GQC C V G C
Sbjct: 775 KDGTFDLFGASLFGCKDCGCDIGGSADNV--CNKETGQCRCHPRVTGRTC 822
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 118/276 (42%), Gaps = 54/276 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCN-PIGSLNLQCN-------SE 72
G C CQ G +C++C + YY + N C C C PI S N + E
Sbjct: 1826 GICDTCQHYTTGDHCDQCIEGYYGNATRGSPNDCMICACPLPIDSNNFATSCDVSEDGYE 1885
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+CKPG TG+KC C + E CK C+C+ + + +CDSV G+C
Sbjct: 1886 IHCECKPGYTGEKCQSCAPGFFGQPEIEGEVCKPCDCSGNINPEEPGSCDSVSGECLMCL 1945
Query: 130 LSSRGRV-----------HTELR-----------VQSRKNFDPA----GNRIWDL-RRCK 162
++ GR +L+ + NF N I + RC+
Sbjct: 1946 NNTYGRACNLCAPGFYGDAIQLKDCQSCICDAVGTEHCDNFVGTCNCYANVIGEKCDRCE 2005
Query: 163 RDTYPLGHG----------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
D Y G S + QC+ G+C CKPGVTG +CDRC+ ++++ E GC
Sbjct: 2006 DDHYGFESGRGCSPCDCGIASNSTQCDDHTGKCACKPGVTGRQCDRCEPGYWNYSEEGCV 2065
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C CN S C++ GQCEC V G +C S
Sbjct: 2066 PCSCNTDYS--RGYGCNAQTGQCECLSGVVGEKCDS 2099
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 121/316 (38%), Gaps = 102/316 (32%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G SN C + +E+ + GG C +CQ + +G NC KC+ +Y+ G
Sbjct: 339 CNCHGHSNECVYSEEIDEKRLSLDIHGNYEGGGICQNCQDNTEGINCNKCKSTFYRPYGK 398
Query: 52 NF----------------------------------------------------CTACNC 59
+ C C C
Sbjct: 399 VWSDRDVCQRDLQLRSLLLDRQLRGGNGSLRVPTGSFNPPNCDSCSYGHFGYPNCRPCEC 458
Query: 60 NPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 118
N G++ C + G C CKP G C +C +YDF E C+ C CN GSV + C
Sbjct: 459 NLNGTIGYHCEAVNGECPCKPNFGGAHCRQCAEGYYDFPE--CEPCGCNEIGSVSHV--C 514
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK--RDTYPL------GH 170
GQC Q + NF AG +CK YP
Sbjct: 515 SYESGQC-----------------QCKPNF--AGQH---CDKCKDGFFNYPTCTYCNCDV 552
Query: 171 GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
G+L+ C+ G+C C+ G G +CD+C +Y++ E C C C+ AGSV CD
Sbjct: 553 RGTLDEVCDKGNGKCLCREGYGGPRCDQCIAGYYNYPE--CVPCNCSGAGSVSTV--CD- 607
Query: 230 VKGQCECKDNVEGAQC 245
V G+C C N G QC
Sbjct: 608 VTGKCACLSNFSGRQC 623
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 105/233 (45%), Gaps = 37/233 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ GP C++C YY C CNC+ GS++ C+ G+C C +G
Sbjct: 565 GKCL-CREGYGGPRCDQCIAGYYNYPE---CVPCNCSGAGSVSTVCDVTGKCACLSNFSG 620
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+C C +Y + E C C C+ GS+ + N + GQC+ A + G+ + + +
Sbjct: 621 RQCTMCMPGYYQYPE--CLPCNCDTHGSIGLSCNTE---GQCQCA-YNFDGKTCNQCK-E 673
Query: 144 SRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
NF DPAG I C + P G CQCK V G C
Sbjct: 674 GFYNFPACEECNCDPAG-VIAKFAGCG--SVPAGE------------LCQCKERVQGRIC 718
Query: 196 DRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D+C +++ + GC+ CEC G++ CD+ GQC CK +V G QC
Sbjct: 719 DKCRPLYWNLNASNPHGCEDCECFIDGTIGALDTCDTKSGQCACKPSVTGRQC 771
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 37/217 (17%)
Query: 39 EKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
E C+D + + D + CNC+ GS + +C G +CQCKP + G +C+ C +Y
Sbjct: 1357 EFCKDAVFSLTADYNSGALPCNCDYYGSTSFECEQFGGQCQCKPHIIGRQCEACKTGYYG 1416
Query: 96 FGEAGCKSCECNPAGSV--KNTPNC---DSVKGQ-CESAQLSSRGRVHTELRVQSRKNFD 149
F + CK C+C P+ ++ K+T C D V G+ C+ + G
Sbjct: 1417 FPD--CKPCDC-PSTALCQKDTGECICPDRVTGEKCDKCMPYTFGY-------------- 1459
Query: 150 PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA 208
++I C + PLG + NLQC+ + G C+CK V G CDRC ++F
Sbjct: 1460 ---DQIIGCEECNCN--PLGVANN-NLQCDLDNGVCECKSNVVGRSCDRCQYGFFNF--P 1511
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ G+ CD C CK NV+G +C
Sbjct: 1512 YCEPCKCDIRGTTFEI--CDQQDETCFCKKNVQGREC 1546
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL-----QCNSEGRCQCKPGVTG 83
C + DG C +C++ +Y C CNC+P G + + CQCK V G
Sbjct: 659 CAYNFDGKTCNQCKEGFYNFPA---CEECNCDPAGVIAKFAGCGSVPAGELCQCKERVQG 715
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
CD+C +++ + GC+ CEC G++ CD+ GQC + + S GR +E
Sbjct: 716 RICDKCRPLYWNLNASNPHGCEDCECFIDGTIGALDTCDTKSGQC-ACKPSVTGRQCSEC 774
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCD 199
+ FD G ++ + C D GGS + CN E G+C+C P VTG C
Sbjct: 775 K---DGTFDLFGASLFGCKDCGCDI-----GGSADNVCNKETGQCRCHPRVTGRTCTYPL 826
Query: 200 VNHY 203
HY
Sbjct: 827 TTHY 830
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 87/204 (42%), Gaps = 39/204 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C + G C C +Y GD C +C C+ +G+ + N G C C
Sbjct: 1939 GECLMCLNNTYGRACNLCAPGFY---GDAIQLKDCQSCICDAVGTEHCD-NFVGTCNCYA 1994
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G+KCDRC+ +HY F GC C+C G N+ CD G+C + + GR
Sbjct: 1995 NVIGEKCDRCEDDHYGFESGRGCSPCDC---GIASNSTQCDDHTGKC-ACKPGVTGR--- 2047
Query: 139 ELRVQSRKNFDPAGNRIWDLRR-------CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGV 190
D W+ C D Y G+G CN++ G+C+C GV
Sbjct: 2048 --------QCDRCEPGYWNYSEEGCVPCSCNTD-YSRGYG------CNAQTGQCECLSGV 2092
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCE 214
G+KCD C + GC+ C+
Sbjct: 2093 VGEKCDSCPYRWVLIPDQGCQECD 2116
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 57/129 (44%), Gaps = 18/129 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ + + F ++ GG C C+ G CE C+ YY G C C+C
Sbjct: 1377 CNCDYYGSTSFECEQF------GGQC-QCKPHIIGRQCEACKTGYY---GFPDCKPCDC- 1425
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPN 117
S L G C C VTG+KCD+C Y FG GC+ C CNP G N
Sbjct: 1426 --PSTALCQKDTGECICPDRVTGEKCDKC--MPYTFGYDQIIGCEECNCNPLGVANNNLQ 1481
Query: 118 CDSVKGQCE 126
CD G CE
Sbjct: 1482 CDLDNGVCE 1490
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
H G C C+ G C++C Y+ S + C C+CN S CN++ G+C+C G
Sbjct: 2034 HTGKCA-CKPGVTGRQCDRCEPGYWNYSEEG-CVPCSCNTDYSRGYGCNAQTGQCECLSG 2091
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCE 105
V G+KCD C + GC+ C+
Sbjct: 2092 VVGEKCDSCPYRWVLIPDQGCQECD 2116
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CD C H FG C+ CECN G++ +C++V G+C CK N GA CR
Sbjct: 440 CDSCSYGH--FGYPNCRPCECNLNGTIGY--HCEAVNGECPCKPNFGGAHCR 487
>gi|440907459|gb|ELR57607.1| Laminin subunit alpha-5 [Bos grunniens mutus]
Length = 3854
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 101/227 (44%), Gaps = 31/227 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P+G+L C+ GRC C+P G CD
Sbjct: 796 CRTGFEGAACDRCAPGYFHFP---LCQLCGCSPVGTLPEGCDDAGRCLCRPEFNGPHCDH 852
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR----VQS 144
C + ++ + E C +C C+P GS+ CD GQC S R RV T LR V
Sbjct: 853 CRLGYHGYPE--CHACHCSPEGSLHAA--CDPHSGQC-----SCRLRV-TGLRCDMCVPG 902
Query: 145 RKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
NF C+ + +P G + + ++ C C+ V G CDRC +
Sbjct: 903 AYNFP----------YCEAGSCHPAGLAPADRVPPEAQAPCTCRAHVEGPSCDRCKPGFW 952
Query: 204 DFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ GC C C+P G++ C GQC CK +V G C +
Sbjct: 953 GLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNGQCFCKPHVCGQTCAA 999
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 112/240 (46%), Gaps = 44/240 (18%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G CL C+ + +GP+C+ CR Y+ G C AC+C+P GSL+ C+ G+C C+ V
Sbjct: 836 AGRCL-CRPEFNGPHCDHCRLGYH---GYPECHACHCSPEGSLHAACDPHSGQCSCRLRV 891
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
TG +CD C Y+F C++ C+PAG D V + AQ R H E
Sbjct: 892 TGLRCDMCVPGAYNFPY--CEAGSCHPAGLAP----ADRVPPE---AQAPCTCRAHVE-- 940
Query: 142 VQSRKNFDPAGNR----IWDL--------RRCKRDTYPLGH-GGSLNLQCNSEGRCQCKP 188
P+ +R W L RC D P G GG+ Q + G+C CKP
Sbjct: 941 -------GPSCDRCKPGFWGLSPSNPEGCTRCNCD--PRGTLGGAAQCQLGN-GQCFCKP 990
Query: 189 GVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C C + +A GC+SC C+ G++ + C+ G C C+ N +G+ C
Sbjct: 991 HVCGQTCAACKDGFFGLDQADYFGCRSCRCDVGGALGQS--CELRTGACMCRPNTQGSTC 1048
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 98/259 (37%), Gaps = 59/259 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC G ++ C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 592 CNCYGHAHDCYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSPDH 651
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC + + GRC C+P TG +CD C DF C
Sbjct: 652 PLDSPHACRRCNCESDFTDGTCEDLTGRCYCRPNFTGARCDACAEGFTDF-----PHCYP 706
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P+ S +T G + S+ G GN C++D
Sbjct: 707 VPSSSHNDTGEQVLPAGHIVNCDCSAAGT---------------QGNA------CRKDP- 744
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G C CKP G C+ C Y GC+ C+C+ G V T
Sbjct: 745 -------------QVGHCVCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVVDGT-- 786
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC C+ EGA C
Sbjct: 787 CDRDSGQCTCRTGFEGAAC 805
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 114/265 (43%), Gaps = 46/265 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G C+ CQ + +G +CE+C+ + + ++ C +C
Sbjct: 2068 CQCHGHSDRCLPGS---------GVCVGCQHNTEGDHCERCQAGFVRTGSEDPAAPCISC 2118
Query: 58 NCN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNP 108
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 2119 PCPLAVPSNNFATGCILRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSG 2178
Query: 109 AGSVKNT-PNCDSVKGQCESAQLSSRG--RVHTELRVQS-RKNFDPAGNRIWDLRRCKR- 163
G +CD + G C RG R T R +S F GN + C R
Sbjct: 2179 NGDPNMLFSDCDPLTGTC-------RGCLRHTTGPRCESCAPGF--YGNALLP-GNCTRC 2228
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSV 221
D P G C+ G+C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2229 DCSPCG-----TEACDPHSGQCLCKAGVTGLRCDRCQEGHFGFEGCEGCRPCACGPAA-- 2281
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCR 246
+ C GQC C+ G QCR
Sbjct: 2282 -ESSECHPQSGQCHCRPGTGGPQCR 2305
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G++ C G +C C+ V G C RC ++ F C+ C+C+ G +
Sbjct: 1640 CGCHEVGAMGPTCEPFGGQCPCRAHVIGRDCSRCATGYWGF--PSCRPCDCS--GRL--- 1692
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1693 --CDELTGQC----------------ICPPRTIPP------DCLVCQPQTFGCHPLVGCE 1728
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G ++ C+++ G+C+C+P V G +CD C + F C+ C+C+ AGS
Sbjct: 1729 ECNCSGPGVQELMDPTCDADSGQCKCRPNVAGRRCDTCAPGFHGF--PSCRPCDCHEAGS 1786
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
T CD + GQC CK+NV+G +C
Sbjct: 1787 APGT--CDPLTGQCYCKENVQGPRC 1809
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 82/210 (39%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 2176 CSGNGDPNMLFSDCDPLT-----GTCRGCLRHTTGPRCESCAPGFYGNALLPGNCTRCDC 2230
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
+P G+ +S G+C CK GVTG +CDRC H+ F G GC+ C C PA + C
Sbjct: 2231 SPCGTEACDPHS-GQCLCKAGVTGLRCDRCQEGHFGFEGCEGCRPCACGPAA---ESSEC 2286
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G QC
Sbjct: 2287 HPQSGQCHCR----------------------PGTGGPQCRECAPGHWGLPEQGCRRCQC 2324
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG+ G++C+ C H
Sbjct: 2325 QGGHCDLHTGRCTCPPGLGGERCETCSHQH 2354
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C H+ E GC+ C+C +CD G+C C +
Sbjct: 2291 GQCHCRPGTGGPQCRECAPGHWGLPEQGCRRCQCQGG-------HCDLHTGRCTCPPGLG 2343
Query: 242 GAQCRS 247
G +C +
Sbjct: 2344 GERCET 2349
>gi|194390720|dbj|BAG62119.1| unnamed protein product [Homo sapiens]
Length = 1101
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNPLGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSCSE 538
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 121/290 (41%), Gaps = 63/290 (21%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHG-GHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C ++++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECRPMQKMRGDVFSPPGMVYGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S L S G C+ C+ G CDRC Y
Sbjct: 323 DLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVK-------NTPNCDSVKGQC------ESAQLSSRGRVHT 138
C CEC+P G++ + P SV GQC E A+ H
Sbjct: 383 LKTISDPYACIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHY 442
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
L DP G C+ D PLG L ++ G+C C VTG C+
Sbjct: 443 GLSAT-----DPLG--------CQPCDCNPLGSLPFLTCDVDT-GQCLCLSYVTGAHCEE 488
Query: 198 CDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C V ++ G GC C+C+ G+ N C GQCEC+ +V G C
Sbjct: 489 CTVGYWGLGNHLHGCSPCDCDIGGAYSNV--CSPKNGQCECRPHVTGRSC 536
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 102/250 (40%), Gaps = 35/250 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN F+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CPCNRFAELC--DPET-------GSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTQG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 1028
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
P+ GG L G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1029 VSPMECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS- 1087
Query: 222 KNTPNCDSVK 231
+ +CD +
Sbjct: 1088 -QSSHCDQAR 1096
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C G +CQCKP V G CDRC YD
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCGRLGGQCQCKPLVVGRCCDRCSTGSYDL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCHCHPQGSKDTV--CDQVTGQC 836
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKP V G CDRC YD G GC C C+P GS CD V GQC C V
Sbjct: 786 GQCQCKPLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQGSKDTV--CDQVTGQCPCHGEVS 843
Query: 242 GAQC 245
G +C
Sbjct: 844 GRRC 847
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 73/181 (40%), Gaps = 17/181 (9%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C V+G +CDRC + FG C C CN + CD G C + +
Sbjct: 834 GQCPCHGEVSGRRCDRCLAGY--FGFPSCHPCPCNRFAEL-----CDPETGSCFNCGGFT 886
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP---LGHGGSLNLQCNSEGRCQCKPG 189
GR + E + +P+ + C D H NL +S+ C C G
Sbjct: 887 TGR-NCERCIDGYYG-NPSSGQPCRPCLCPDDPSSNQYFAHSCYQNLW-SSDVICNCLQG 943
Query: 190 VTGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
TG +C C Y A C+ C CN V + +C V G+C C N +GA C
Sbjct: 944 YTGTQCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLRCLHNTQGANC 1003
Query: 246 R 246
+
Sbjct: 1004 Q 1004
>gi|431902413|gb|ELK08913.1| Usherin [Pteropus alecto]
Length = 2952
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 125/266 (46%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCF-------FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----- 48
C CN S C F E + G GG C DC+ + G NCE C+D +++
Sbjct: 562 CQCNSHSRSCHYSISEDPFPSE--HHRGGGGVCDDCEHNTTGRNCELCKDYFFRPVGMDP 619
Query: 49 SGDNFCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCK 102
S + C +C+C+ IG+ N L C+ G +C CK V+G +C++C Y E GC
Sbjct: 620 SAIDVCKSCDCDKIGTRNSSLLCDQIGGQCNCKRHVSGRQCNQCQNGFYKLQELDPDGCT 679
Query: 103 SCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTEL--RVQSRKNFDPAGNRIWDLR 159
C CN +G+V C GQC+ A + H + +V R N D
Sbjct: 680 PCNCNTSGTVDGDITCHPNSGQCKCKANVIGLRCDHCDFGFKVLRRANAD-------GCE 732
Query: 160 RCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
C+ D HG ++ G+C+C+ G G +CD C + Y GCK+C+C+PAG
Sbjct: 733 PCQCDL----HGSESSVCDPLSGQCECRKGARGLQCDTCREHFYGLDITGCKACDCDPAG 788
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
S+ + CD+ G C C+ V G +C
Sbjct: 789 SLPGS-VCDARTGLCRCRPYVGGRRC 813
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 119/240 (49%), Gaps = 59/240 (24%)
Query: 35 GPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCKPGVTGDKCDRC 89
G C++C + Y+ Q+S + C CNC+ G++N L C+ S G+C CK GVTG C+RC
Sbjct: 810 GRRCDECLEGYFHLQQSNSSLCLPCNCDETGTVNGSLLCDKSTGQCPCKLGVTGLHCNRC 869
Query: 90 DVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
+++ Y+ GC+ CEC+ +G++ T CD + GQC L + +R+
Sbjct: 870 ELHRYNVTTGDFQGCRMCECDSSGTLPGT-ICDPISGQC--------------LCLPNRQ 914
Query: 147 NFDPAGNRIWDLRRCK--RDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGV 190
RRC + + + G G+++ C+ G+C C+
Sbjct: 915 G-----------RRCNECQPGFYISPGNATGCQPCLCHASGAVSHTCDGLTGQCICQDAS 963
Query: 191 T-GDKCDRCDVNHYDFG---EAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
T G +CDRC +H FG + G C+ C C+ +G++ T C V GQC CK V G++C
Sbjct: 964 TAGQRCDRC--HHLYFGFDPQTGRCQPCNCHLSGALNET--CHVVTGQCFCKRFVTGSKC 1019
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 32/238 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCNS-EGRCQC 77
GG C +C+ G C +C++ +Y Q+ + CT CNCN G+++ + C+ G+C+C
Sbjct: 646 GGQC-NCKRHVSGRQCNQCQNGFYKLQELDPDGCTPCNCNTSGTVDGDITCHPNSGQCKC 704
Query: 78 KPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G +CD CD A GC+ C+C+ GS + CD + GQCE + +RG
Sbjct: 705 KANVIGLRCDHCDFGFKVLRRANADGCEPCQCDLHGSESSV--CDPLSGQCECRK-GARG 761
Query: 135 RVHTELRVQS-RKNFDPAGNRIWDLRRCKR-DTYPLGH-GGSLNLQCNSE-GRCQCKPGV 190
L+ + R++F D+ CK D P G GS+ C++ G C+C+P V
Sbjct: 762 -----LQCDTCREHFYGL-----DITGCKACDCDPAGSLPGSV---CDARTGLCRCRPYV 808
Query: 191 TGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +CD C ++ ++ C C C+ G+V + CD GQC CK V G C
Sbjct: 809 GGRRCDECLEGYFHLQQSNSSLCLPCNCDETGTVNGSLLCDKSTGQCPCKLGVTGLHC 866
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 102/253 (40%), Gaps = 61/253 (24%)
Query: 34 DGPNCEKCRDNYYQKS---GDNFCTACNCNPIGSLNLQCNSEGRC--------------- 75
+GP+C++C Y K GD A NC P QCNS R
Sbjct: 532 EGPHCDRCLPLYNDKPFRQGDQ-VHAFNCKPC-----QCNSHSRSCHYSISEDPFPSEHH 585
Query: 76 --------QCKPGVTGDKCDRCDVNHYDFGEAG--------CKSCECNPAGSVKNTPNCD 119
C+ TG C+ C Y F G CKSC+C+ G+ ++ CD
Sbjct: 586 RGGGGVCDDCEHNTTGRNCELC--KDYFFRPVGMDPSAIDVCKSCDCDKIGTRNSSLLCD 643
Query: 120 SVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL--NL 176
+ GQC +S R + + DP G C +T G++ ++
Sbjct: 644 QIGGQCNCKRHVSGRQCNQCQNGFYKLQELDPDG-----CTPCNCNT-----SGTVDGDI 693
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKG 232
C+ G+C+CK V G +CD CD A GC+ C+C+ GS + CD + G
Sbjct: 694 TCHPNSGQCKCKANVIGLRCDHCDFGFKVLRRANADGCEPCQCDLHGSESSV--CDPLSG 751
Query: 233 QCECKDNVEGAQC 245
QCEC+ G QC
Sbjct: 752 QCECRKGARGLQC 764
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQ 76
G G C+ G C++C Y+ ++G C CNC+ G+LN C+ G+C
Sbjct: 952 GLTGQCICQDASTAGQRCDRCHHLYFGFDPQTGR--CQPCNCHLSGALNETCHVVTGQCF 1009
Query: 77 CKPGVTGDKCDRCDV--NHYDFGE-AGCK---SCECNPAGSVKNT 115
CK VTG KCD C + +H D G GC S + P G V+++
Sbjct: 1010 CKRFVTGSKCDACVLSASHLDAGNLLGCSKTPSQQPPPRGQVQSS 1054
>gi|306921185|dbj|BAJ17672.1| laminin, alpha 5 [synthetic construct]
Length = 3690
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 602 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 657
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 658 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 707
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G ++ C C+ V G CDR
Sbjct: 708 DTCVPGAYNFP----------YCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDR 757
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+ G++ C GQC CK +V G C S
Sbjct: 758 CKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 810
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1864 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFMSSRDDPSAPCVSCP 1914
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1915 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1974
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1975 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGN-------CTRCDCTP 2027
Query: 168 LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2028 CGTEA-----CDPRSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS--- 2079
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2080 ECHPQSGQCHCRPGTMGPQCR 2100
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 79/210 (37%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1971 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC 2025
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ S G C CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 2026 TPCGTEACDPRS-GHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---C 2081
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G QC
Sbjct: 2082 HPQSGQCHCR----------------------PGTMGPQCRECAPGYWGLPEQGCRRCQC 2119
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2120 PGGRCDPHTGRCNCPPGLSGERCDTCSQQH 2149
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1438 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1488
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1489 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1526
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1527 ECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1584
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1585 APGV--CDPLTGQCYCKENVQGPKC 1607
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G CDR
Sbjct: 562 CRVGFEGATCDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDR 618
Query: 89 CDVNHYDFGEAGCKSCECNPAGSV 112
C ++ F C++C C+P G++
Sbjct: 619 CRPGYHGF--PNCQACTCDPRGAL 640
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 494 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 550
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL--- 168
+ CD GQC + R F+ A RC + PL
Sbjct: 551 D--RCDPDTGQC-----------------RCRVGFEGA-----TCDRCAPGYFHFPLCQL 586
Query: 169 ---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 587 CGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALDQL- 643
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 644 -CGA-GGLCRCRPGYTGTACQ 662
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C CKP V G
Sbjct: 746 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 805
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 806 QACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 848
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C+C P G CD G+C C +
Sbjct: 2086 GQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGRCNCPPGLS 2138
Query: 242 GAQC 245
G +C
Sbjct: 2139 GERC 2142
>gi|315221168|ref|NP_001186735.1| laminin subunit alpha-1 precursor [Gallus gallus]
Length = 3093
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 104/237 (43%), Gaps = 48/237 (20%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ D G C+KC + +Y C CNC+ GS++ CN +G+C C PGV G+KCD
Sbjct: 929 DCKSDVIGQKCDKCLNGFYGLLTGLGCIPCNCSQFGSISEDCNHQGQCHCLPGVAGEKCD 988
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC + ++GC C+C NC++ GQC
Sbjct: 989 RCAHGFHSLQKSGCTPCDC-----AHTQNNCNADSGQC---------------------- 1021
Query: 148 FDPAGNRIWDLRRCKRDTYPLG-----------HGGSLNLQCNS-EGRCQCKPGVTGDKC 195
P R C+ + + L GS +LQC+ G+CQCK G C
Sbjct: 1022 ICPPHTRGPKCDLCEENHWGLSPKLGCKACNCSDSGSDSLQCDVLTGQCQCKAEFGGQNC 1081
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGS-------VKNTPNCDSVKGQCECKDNVEGAQC 245
RC + + D+ + C +C+C+ +G+ K C+ G C CK+NV G QC
Sbjct: 1082 SRCALGYRDYPD--CVACDCDLSGTKAEMCDDTKGLCGCEEETGICACKENVFGLQC 1136
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 106/234 (45%), Gaps = 39/234 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G CL C G+ G +CEKC D YY + C AC C+ GSL+ C+ E G C CK V
Sbjct: 875 GQCLKCVGNTAGLHCEKCADGYYGDAVTEKSCRACECHVNGSLSSVCHHETGICDCKSDV 934
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G KCD+C Y GC C C+ GS+ + +C+ +GQC H
Sbjct: 935 IGQKCDKCLNGFYGLLTGLGCIPCNCSQFGSI--SEDCNH-QGQC-----------HCLP 980
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPGVTG 192
V K RC + L G CN++ G+C C P G
Sbjct: 981 GVAGEK-----------CDRCAHGFHSLQKSGCTPCDCAHTQNNCNADSGQCICPPHTRG 1029
Query: 193 DKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KCD C+ NH+ + GCK+C C+ +GS ++ CD + GQC+CK G C
Sbjct: 1030 PKCDLCEENHWGLSPKLGCKACNCSDSGS--DSLQCDVLTGQCQCKAEFGGQNC 1081
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 30/143 (20%)
Query: 1 CNCNGFSNRCFFDKELYNR----------TGHGGHCLDCQGDRDGPNCEKCRDNYY--QK 48
CNC+ + C++++ + ++ TG GG CL+C G NCE C D Y+ QK
Sbjct: 334 CNCHNKAEDCYYNQTIADQKRSMNIHGQYTG-GGVCLNCSQHTTGINCEMCADGYFRPQK 392
Query: 49 SG---DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNH 93
D+ C C C+P GSL+ C + G+CQC+ G TG+KCDRC +
Sbjct: 393 VSPYDDHPCYPCGCDPFGSLSSVCVKDERQSDSQHGTWPGQCQCRDGYTGEKCDRCAFGY 452
Query: 94 YDFGEAGCKSCECNPAGSVKNTP 116
G C C C+ GS+ P
Sbjct: 453 R--GYPNCLRCNCSLIGSINEDP 473
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 106/264 (40%), Gaps = 58/264 (21%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCN 60
N FS C + G G C C G CE+C + YY C C CN
Sbjct: 806 ANNFSPTCQLSE------GEGIVCDKCLPGYTGSRCERCANGYYGNPLVPGQSCVPCECN 859
Query: 61 PIGSLNLQ----CNS-EGRC-QCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSV 112
G++N Q C++ G+C +C G C++C +Y E C++CEC+ GS+
Sbjct: 860 --GNVNPQEDGYCDTITGQCLKCVGNTAGLHCEKCADGYYGDAVTEKSCRACECHVNGSL 917
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG- 171
+ C G C+ D G + +C Y L G
Sbjct: 918 SSV--CHHETGICDCKS-------------------DVIGQKC---DKCLNGFYGLLTGL 953
Query: 172 ----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
GS++ CN +G+C C PGV G+KCDRC + ++GC C+C
Sbjct: 954 GCIPCNCSQFGSISEDCNHQGQCHCLPGVAGEKCDRCAHGFHSLQKSGCTPCDC-----A 1008
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
NC++ GQC C + G +C
Sbjct: 1009 HTQNNCNADSGQCICPPHTRGPKC 1032
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HC C +G CEKC YY Q G + C C CNP GS+++ C+ G+C CK G
Sbjct: 1482 HCDACLPGYEGQYCEKCSLGYYGDPQLPGGS-CHLCQCNPSGSVHVNCDRVTGKCPCKQG 1540
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
VTG C+ C+ H E C SC+ N G + N N DS+ S L+ G VH
Sbjct: 1541 VTGQLCEECEPRHL-LLEEECVSCDDNCTGVLLN--NLDSLSENILSLNLT--GVVHVPS 1595
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS--LNL 176
+ S + A + + + TY L G LNL
Sbjct: 1596 GILSE--LENATKHLKNSLLREDRTYSLATAGQSLLNL 1631
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C GP C+ C +N++ S C ACNC+ GS +LQC+ G+CQCK
Sbjct: 1019 GQCI-CPPHTRGPKCDLCEENHWGLSPKLGCKACNCSDSGSDSLQCDVLTGQCQCKAEFG 1077
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C RC + + D+ + C +C+C+ +G+ CD KG C
Sbjct: 1078 GQNCSRCALGYRDYPD--CVACDCDLSGT--KAEMCDDTKGLC 1116
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 112/262 (42%), Gaps = 40/262 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG + C D + G C CQ + GP C++C +Y + C C
Sbjct: 749 CKCNGHATEC--DTQ--------GVCFACQHNTTGPFCDQCLPGFYGSPSQGTPEDCQPC 798
Query: 58 NCNPIGS----LNLQCN-SEGRC----QCKPGVTGDKCDRCDVNHYD---FGEAGCKSCE 105
C P+ S + C SEG +C PG TG +C+RC +Y C CE
Sbjct: 799 AC-PLSSAANNFSPTCQLSEGEGIVCDKCLPGYTGSRCERCANGYYGNPLVPGQSCVPCE 857
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
CN + + CD++ GQC ++ G +H E + D + R C+
Sbjct: 858 CNGNVNPQEDGYCDTITGQCLKCVGNTAG-LHCE-KCADGYYGDAVTEK--SCRACECHV 913
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
GSL+ C+ E G C CK V G KCD+C Y GC C C+ GS+
Sbjct: 914 -----NGSLSSVCHHETGICDCKSDVIGQKCDKCLNGFYGLLTGLGCIPCNCSQFGSI-- 966
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ +C+ +GQC C V G +C
Sbjct: 967 SEDCNH-QGQCHCLPGVAGEKC 987
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 61/138 (44%), Gaps = 25/138 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACN 58
C CN S C D E G CL+C+ + G C C YY K N C+ C
Sbjct: 1410 CQCNNHSETC--DPE-------TGKCLNCRDNTVGDYCSACAPGYYGKVIGSVNDCSLCA 1460
Query: 59 C---NPIGSLNLQCNSEGRC-----QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
C NP+ S + C +G C PG G C++C + +Y C C+CN
Sbjct: 1461 CPRANPV-SFSPTCVLKGVQDYHCDACLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCQCN 1519
Query: 108 PAGSVKNTPNCDSVKGQC 125
P+GSV NCD V G+C
Sbjct: 1520 PSGSVH--VNCDRVTGKC 1535
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C PG G C++C + +Y C C+CNP+GSV NCD V G+C CK V G
Sbjct: 1486 CLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCQCNPSGSVH--VNCDRVTGKCPCKQGVTG 1543
Query: 243 AQC 245
C
Sbjct: 1544 QLC 1546
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQC+ G TG+KCDRC + G C C C+ GS+ P + C CK+NVE
Sbjct: 432 GQCQCRDGYTGEKCDRCAFGYR--GYPNCLRCNCSLIGSINEDPCAEP----CLCKENVE 485
Query: 242 GAQC 245
G C
Sbjct: 486 GENC 489
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 99/253 (39%), Gaps = 65/253 (25%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC-QCKPGVTG 83
+C G +CE C YY+ G F C C CN + +C+++G C C+ TG
Sbjct: 717 ECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCNGHAT---ECDTQGVCFACQHNTTG 773
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNCDSVKGQ------CESAQLS 131
CD+C Y G C+ C C P S N +P C +G+ C
Sbjct: 774 PFCDQCLPGFYGSPSQGTPEDCQPCAC-PLSSAANNFSPTCQLSEGEGIVCDKCLPGYTG 832
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PLGHG---------GSLNLQ--- 177
SR RC Y PL G G++N Q
Sbjct: 833 SR------------------------CERCANGYYGNPLVPGQSCVPCECNGNVNPQEDG 868
Query: 178 -CNS-EGRC-QCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
C++ G+C +C G C++C +Y E C++CEC+ GS+ + C G
Sbjct: 869 YCDTITGQCLKCVGNTAGLHCEKCADGYYGDAVTEKSCRACECHVNGSLSSV--CHHETG 926
Query: 233 QCECKDNVEGAQC 245
C+CK +V G +C
Sbjct: 927 ICDCKSDVIGQKC 939
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 33 RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 92
RDG EKC + G C CNC+ IGS+N +E C CK V G+ CD C
Sbjct: 437 RDGYTGEKCDRCAFGYRGYPNCLRCNCSLIGSINEDPCAEP-CLCKENVEGENCDLCKPG 495
Query: 93 HYDFGE---AGCKSCECNPAGSVKNTPNCDSV 121
Y+ E GC C C V CDS+
Sbjct: 496 FYNLQERNPEGCTECFCFGVSDV-----CDSL 522
>gi|328722049|ref|XP_001949708.2| PREDICTED: laminin subunit alpha-like [Acyrthosiphon pisum]
Length = 3586
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C G CE+C YYQ C C+C+ GS+ + C+++G+C+CKP G +CD+
Sbjct: 536 CLPSFAGRTCEQCSPGYYQYPE---CKFCDCDSQGSIGVSCDNDGKCKCKPNFMGTRCDK 592
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C Y+F C+ C CNPAG + C S+ G+ + GR+ E R
Sbjct: 593 CKEGLYNF--PICEECNCNPAGVLSTFVGCGSLPLGELCQCKPRVNGRICDECR------ 644
Query: 148 FDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
W+L+ D + G + + G+C CKP T +CD C
Sbjct: 645 -----ELFWNLQPTNPDGCQECDCFMPGVLSGVGVCNPKSGQCVCKPSATSRRCDECSEG 699
Query: 202 HYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y E GC C CN GS+ CD GQC C+ + G C
Sbjct: 700 FYSLNENSLFGCTECGCNVGGSINE--KCDKNNGQCLCQPRIVGRAC 744
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 109/282 (38%), Gaps = 81/282 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG SN C DK G C +C+ G +CEKC Y+
Sbjct: 1727 CQCNGHSNTC--DKA-------TGICNNCKHSTTGDHCEKCIIGYHGNASIGTPYDCLIC 1777
Query: 47 ----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG-- 100
+ +NF T C +P G+ + C C PG G +C+ C+ Y E
Sbjct: 1778 ACPLPIASNNFATGCEVSPDGN-------KISCDCIPGYFGARCESCNAGFYGSPETPGE 1830
Query: 101 -CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
CK C+C+ + ++ CDS+ G+C S+ G +
Sbjct: 1831 VCKECQCSGNINKEDPGACDSITGKCTRCLNSTFGE---------------------SCQ 1869
Query: 160 RCKRDTYPLGHGGSLNLQ---------------CNSEGRCQCKPGVTGDKCDRCDVNHYD 204
C+ P G ++NL+ N G C C V G+KCDRC VNHY
Sbjct: 1870 YCR----PGYFGDAVNLKDCQACDCDKCGMEKCDNYNGLCVCHQNVEGEKCDRCAVNHYG 1925
Query: 205 FGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F GCK+CEC A + CD G C CK V G C
Sbjct: 1926 FETCKGCKACECALASE---SSQCDENTGLCRCKPGVAGRTC 1964
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCKP 79
GG C C+ + G C +C D +Y NF C +C CN IGS N C+ + G+C C
Sbjct: 394 GGQC-PCKQNFGGKFCYQCADGFY-----NFPQCKSCECNEIGSRNSICDQKTGQCLCHS 447
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR---- 135
CD+C NH +G C C C+ GS+ C+ GQC + + R
Sbjct: 448 SYGNLSCDQC--NHGYYGFPTCSYCNCDLIGSLPEV--CNKTNGQCMCKEGYAGPRCDKC 503
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+H+ N D + C GS C++ G+C C P G C
Sbjct: 504 LHSY-------------NGYPDCKPCG-----CSERGSATSICDASGKCPCLPSFAGRTC 545
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C +Y + E CK C+C+ GS+ + CD+ G+C+CK N G +C
Sbjct: 546 EQCSPGYYQYPE--CKFCDCDSQGSIGVS--CDN-DGKCKCKPNFMGTRC 590
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 107/265 (40%), Gaps = 47/265 (17%)
Query: 1 CNCNGFSNRCFFDK---------ELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC G S C +D +++ + GG C +C+ G NC+KC +Y+ G
Sbjct: 263 CNCFGHSESCVYDNATDTSHLSIDIHGKYEGGGVCQNCRDHTTGINCDKCVFGFYRPVGK 322
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC+ S G+C+CK CDRC +Y G CK CEC
Sbjct: 323 LLNETDVCQPCNCDHFYSTGNCSEGFGKCECKAAYAAPDCDRCSEGYY--GYPDCKPCEC 380
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-----GNRIWDLRRC 161
G+ C++ GQC Q NF + ++ +C
Sbjct: 381 FLDGT--RGRQCENTGGQCPCKQ-----------------NFGGKFCYQCADGFYNFPQC 421
Query: 162 KRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
K + GS N C+ + G+C C CD+C NH +G C C C+ GS
Sbjct: 422 K--SCECNEIGSRNSICDQKTGQCLCHSSYGNLSCDQC--NHGYYGFPTCSYCNCDLIGS 477
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ C+ GQC CK+ G +C
Sbjct: 478 LPEV--CNKTNGQCMCKEGYAGPRC 500
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 79/192 (41%), Gaps = 47/192 (24%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQC-NSEGRCQCK 78
G C C G +C+ CR Y+ GD C AC+C+ G +C N G C C
Sbjct: 1854 GKCTRCLNSTFGESCQYCRPGYF---GDAVNLKDCQACDCDKCGME--KCDNYNGLCVCH 1908
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G+KCDRC VNHY F GCK+CEC A + CD G C
Sbjct: 1909 QNVEGEKCDRCAVNHYGFETCKGCKACECALASE---SSQCDENTGLCRCKP-------- 1957
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-----------GRCQC 186
R D RCK + G ++ CNSE G+C+C
Sbjct: 1958 ------------GVAGRTCD--RCKPGYWNYTEEGCISCGCNSEYSVGVSCNPRTGQCEC 2003
Query: 187 KPGVTGDKCDRC 198
PGV GDKCD C
Sbjct: 2004 LPGVIGDKCDHC 2015
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ GP C+KC +Y +G C C C+ GS C++ G+C C P G
Sbjct: 487 GQCM-CKEGYAGPRCDKCLHSY---NGYPDCKPCGCSERGSATSICDASGKCPCLPSFAG 542
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR----GRVHTE 139
C++C +Y + E CK C+C+ GS+ + + D K +C+ + +R
Sbjct: 543 RTCEQCSPGYYQYPE--CKFCDCDSQGSIGVSCDNDG-KCKCKPNFMGTRCDKCKEGLYN 599
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
+ N +PAG + C + PLG CQCKP V G CD C
Sbjct: 600 FPICEECNCNPAG-VLSTFVGC--GSLPLGE------------LCQCKPRVNGRICDECR 644
Query: 200 VNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ GC+ C+C G + C+ GQC CK + +C
Sbjct: 645 ELFWNLQPTNPDGCQECDCFMPGVLSGVGVCNPKSGQCVCKPSATSRRC 693
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
+ G C+ C + +G C++C N+Y C AC C + S + QC+ G C+CKPG
Sbjct: 1901 YNGLCV-CHQNVEGEKCDRCAVNHYGFETCKGCKACEC-ALASESSQCDENTGLCRCKPG 1958
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
V G CDRC ++++ E GC SC CN SV + C+ GQCE
Sbjct: 1959 VAGRTCDRCKPGYWNYTEEGCISCGCNSEYSVGVS--CNPRTGQCE 2002
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C+CKPGV G CDRC ++++ E GC SC CN SV + C+ GQCEC V
Sbjct: 1951 GLCRCKPGVAGRTCDRCKPGYWNYTEEGCISCGCNSEYSVGVS--CNPRTGQCECLPGVI 2008
Query: 242 GAQC 245
G +C
Sbjct: 2009 GDKC 2012
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 81/203 (39%), Gaps = 47/203 (23%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNCN GSL+ C+ G +CQCKP V G +C+ C + FG CKSC C + + +
Sbjct: 1299 CNCNSDGSLSYVCDPYGGQCQCKPNVIGRRCEACKTGY--FGFPDCKSCNCPSVATCETS 1356
Query: 116 P------------NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
NCD QCE FDP I C
Sbjct: 1357 SGECICPPRVVGKNCD----QCEPMTYG----------------FDP----IIGCEECNC 1392
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + + N QC+ G C+CK + G CD C H+ F C C C+ G+
Sbjct: 1393 NFFGVEDK---NRQCDLFNGSCECKENIVGRSCDHCRSGHWSFPR--CYLCNCDYRGTTS 1447
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
C+ +C CK NV G C
Sbjct: 1448 EI--CNQNNSECFCKSNVYGQAC 1468
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 82/202 (40%), Gaps = 32/202 (15%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
+GG C C+ + G CE C+ Y+ G C +CNC + + S G C C P V
Sbjct: 1314 YGGQC-QCKPNVIGRRCEACKTGYF---GFPDCKSCNCPSVATCE---TSSGECICPPRV 1366
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G CD+C+ Y F GC+ C CN G CD G CE + + GR
Sbjct: 1367 VGKNCDQCEPMTYGFDPIIGCEECNCNFFGVEDKNRQCDLFNGSCECKE-NIVGRSCDHC 1425
Query: 141 RVQSRKNFDPAGNRIWDLRRCKR---DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCD 196
R +G+ W RC D + G+ + CN + C CK V G CD
Sbjct: 1426 R---------SGH--WSFPRCYLCNCD-----YRGTTSEICNQNNSECFCKSNVYGQACD 1469
Query: 197 RCDVNHYDFGE---AGCKSCEC 215
C ++ E GC C C
Sbjct: 1470 LCKEGTFNIQEKNDEGCSKCFC 1491
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 80/184 (43%), Gaps = 21/184 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN--LQCNSEGR---CQCKPGVTG 83
C+ + G C+KC++ Y C CNCNP G L+ + C S CQCKP V G
Sbjct: 581 CKPNFMGTRCDKCKEGLYNFP---ICEECNCNPAGVLSTFVGCGSLPLGELCQCKPRVNG 637
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
CD C ++ GC+ C+C G + C+ GQC + S+ R E
Sbjct: 638 RICDECRELFWNLQPTNPDGCQECDCFMPGVLSGVGVCNPKSGQC-VCKPSATSRRCDEC 696
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCD 199
S + N ++ C + GGS+N +C+ + G+C C+P + G C
Sbjct: 697 ---SEGFYSLNENSLFGCTECGCNV-----GGSINEKCDKNNGQCLCQPRIVGRACTEPM 748
Query: 200 VNHY 203
HY
Sbjct: 749 QAHY 752
>gi|297289126|ref|XP_001090498.2| PREDICTED: laminin subunit beta-4 [Macaca mulatta]
Length = 1737
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD +Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 307 CSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 366
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 367 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 426
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 427 CQPCDCNPLGSLPLL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 480
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 481 CDCDI-----GGAYSNMCSPKNGQCECRPHVTGRSC 511
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 838 CPCNGFAELC--DSE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 888
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 889 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCPCN 948
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 949 NNIDVTDPESCSRVTGECLRCLHNTQG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 1003
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
P+ GG L G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1004 VSPVECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS- 1062
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD + GQC CK G C
Sbjct: 1063 -QSSHCDQLTGQCPCKLGYGGKHC 1085
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 89/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G ++C G
Sbjct: 964 GECLRCLHNTQGANCQLCKPGHYGSALNQTCRRCSCHASGVSPVECPPGGGACLCDPVTG 1023
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1024 ACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1075
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1076 ----------------------------CK-----LGYGGK------------------- 1083
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1084 -HCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCRCREGVSGQRC 1133
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK V G KCD+C NHY GC+ C+CNP GS+ CD GQC C
Sbjct: 396 GQCLCKENVEGAKCDQCKPNHYGLSATDPLGCQPCDCNPLGSLPLL-TCDVDTGQCLCLS 454
Query: 239 NVEGAQCR 246
V GA C
Sbjct: 455 YVTGAHCE 462
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 23 GGHCL--------DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EG 73
GG CL C + G C++C D Y+ C +C+C+P S + C+ G
Sbjct: 1013 GGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTSQSSHCDQLTG 1072
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+C CK G G C C N+Y C C+CN AG+ K P CD G C
Sbjct: 1073 QCPCKLGYGGKHCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMC 1122
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 45/101 (44%), Gaps = 21/101 (20%)
Query: 160 RCKRD-TYPLGHGGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY------DFGEAGCK 211
RC D T L GG S G C+ C+ G CDRC Y C
Sbjct: 315 RCHFDMTMYLASGGL------SGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYACI 368
Query: 212 SCECNPAGSVK-------NTPNCDSVKGQCECKDNVEGAQC 245
CEC+P G++ + P SV GQC CK+NVEGA+C
Sbjct: 369 PCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKC 409
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 75/191 (39%), Gaps = 37/191 (19%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C V+G +CDRC + FG C+SC CN + CDS G C + +
Sbjct: 809 GQCPCHGEVSGRRCDRCLAGY--FGFPSCRSCPCNGFAEL-----CDSETGSCFNCGGFT 861
Query: 133 RGR-----VHTELRVQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GR + S DP+ N+ + H NL +
Sbjct: 862 TGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQYF------------AHSCYQNLW-S 908
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-E 235
S+ C C G TG +C C Y A C+ C CN V + +C V G+C
Sbjct: 909 SDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCPCNNNIDVTDPESCSRVTGECLR 968
Query: 236 CKDNVEGAQCR 246
C N +GA C+
Sbjct: 969 CLHNTQGANCQ 979
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCK V G CDRC Y
Sbjct: 726 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKSLVVGRCCDRCSPGSYGL 784
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 785 GHHGCHPCHCHPQGSKDTV--CDLVTGQC 811
>gi|91084119|ref|XP_969552.1| PREDICTED: similar to laminin alpha-1, 2 chain [Tribolium castaneum]
gi|270008021|gb|EFA04469.1| hypothetical protein TcasGA2_TC014773 [Tribolium castaneum]
Length = 3160
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 104/235 (44%), Gaps = 50/235 (21%)
Query: 29 CQGDRDGPNCEKCRDNYYQ-KSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
C+ GP C+KC+ Y++ KSG C CNCN GS +L CN + G C CKPGV G C
Sbjct: 1153 CKPHYIGPKCDKCKPGYWKTKSG---CAPCNCNYNGSTSLNCNPQTGLCPCKPGVEGRNC 1209
Query: 87 DRCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
D C HY GCK C+ C G + C G+C L++
Sbjct: 1210 DTCKDKHYGNVATGCKICDPCEKPGHI-----CHPETGKCVCPPLTTGT----------- 1253
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHG------------GSLNLQCNSEGRCQCKPGVTGD 193
+ RC + Y L G GS N QC+ GRC CK G G+
Sbjct: 1254 -----------NCDRCVANAYNLEPGKVGCKPCDCSKTGSSNQQCDESGRCSCKTGFEGE 1302
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
KC+RC ++Y++ C+ C C+ G+ C + C+CK NVEG C
Sbjct: 1303 KCNRCTFDYYNY--PNCRKCGCDIGGTRPEECINGLCKCSQDGCKCKANVEGRHC 1355
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G CL+C+G+ +G CEKC+ YY + + C C C+ IGSL+ C+ E G+CQC+ T
Sbjct: 876 GQCLNCKGNTEGWRCEKCKPGYYGDALMSNCIPCQCDTIGSLSKNCDQETGQCQCRERFT 935
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
C+ C+ Y C +C CN GS +P CD G C+
Sbjct: 936 ERTCNTCEPG-YGNVTGLCVACACNKIGST--SPICDQHTGLCD 976
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 108/281 (38%), Gaps = 81/281 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C+CNG S C D G C CQ + G NCE+C+ +Y
Sbjct: 751 CDCNGHSETCNPDT---------GECF-CQHNTTGENCERCKPGFYGNPLRGTKEACKKC 800
Query: 47 ----QKSGDNFCTACNCNPIGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVNHY----DF 96
+ +NF +C + LN E QC G TGD C+ CD ++ +
Sbjct: 801 ACPLENDENNFSPSCQ---LDYLNEDSEEESYVCTQCPKGYTGDHCEICDDGYFGNPMEL 857
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW 156
G CK C+CN + CD V GQC + + ++ G W
Sbjct: 858 GNV-CKPCDCNGSP-------CDKVTGQCLNCKGNTEG---------------------W 888
Query: 157 DLRRCKRDTYPLGHG-----------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYD 204
+CK Y GSL+ C+ E G+CQC+ T C+ C+ Y
Sbjct: 889 RCEKCKPGYYGDALMSNCIPCQCDTIGSLSKNCDQETGQCQCRERFTERTCNTCEPG-YG 947
Query: 205 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +C CN GS +P CD G C+CK V+G C
Sbjct: 948 NVTGLCVACACNKIGST--SPICDQHTGLCDCKPGVDGFYC 986
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 65/134 (48%), Gaps = 21/134 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN SN C DK + GHCL+C GP+CE C + +Y C C C
Sbjct: 1577 CQCNNRSNTC--DK-------NTGHCLNCTDSTTGPHCELCAEGHYMDPSGK-CLPCLC- 1625
Query: 61 PIGSLNLQ--CNSEGR----CQCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSV 112
P S N C GR C CK G +G +CD+C+ +++ +AG C+ C CN GS
Sbjct: 1626 PSESQNFAQNCTPNGRHNFICICKRGYSGHRCDKCENDYWGNPQAGGTCQPCNCNAYGS- 1684
Query: 113 KNTPNCDSVKGQCE 126
+ CD GQC+
Sbjct: 1685 -ESLKCDKTTGQCK 1697
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 23/130 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G + C +D+ + ++ G GG C +C G NCE+C YY+ G
Sbjct: 360 CNCHGHATSCHYDESV-DKAGLSMDINGNYQGGGVCDNCTAHTTGINCERCLPGYYRPYG 418
Query: 51 -----DNFCTACNCNPIGSLNLQCNSEGR----CQCKPGVTGDKCDRCDVNHYDFGEAGC 101
D C C+C GS C EG C C PG G+KCD+C G C
Sbjct: 419 TVIYADKPCLKCDCELPGSAG-TCTQEGEQAGNCHCLPGYEGEKCDKCAKGFK--GWPSC 475
Query: 102 KSCECNPAGS 111
+ C C+P G+
Sbjct: 476 EPCPCDPRGA 485
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 15/114 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H C+ C+ G C+KC ++Y+ Q G C CNCN GS +L+C+ + G+C+C
Sbjct: 1642 HNFICI-CKRGYSGHRCDKCENDYWGNPQAGGT--CQPCNCNAYGSESLKCDKTTGQCKC 1698
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSC-EC-----NPAGSVKNTPN--CDSVKG 123
KPG TG+KC +C + + C C EC + + N+ N DSVKG
Sbjct: 1699 KPGFTGEKCSKCSSSRNVIQDGVCVPCDECTQILFHTIDELSNSLNDTLDSVKG 1752
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 148 FDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 206
+ P G I+ + C + D G G+ + G C C PG G+KCD+C G
Sbjct: 414 YRPYGTVIYADKPCLKCDCELPGSAGTCTQEGEQAGNCHCLPGYEGEKCDKCAKGFK--G 471
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C C+P G+ + D +G C CKD+VEG C
Sbjct: 472 WPSCEPCPCDPRGAQRT----DDCEGDCLCKDHVEGKFC 506
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 85/209 (40%), Gaps = 50/209 (23%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACN-CNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
C+ +G NC+ C+D +Y N T C C+P C+ E G+C C P TG C
Sbjct: 1200 CKPGVEGRNCDTCKDKHY----GNVATGCKICDPCEKPGHICHPETGKCVCPPLTTGTNC 1255
Query: 87 DRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
DRC N Y+ G+ GCK C+C+ GS QC+ + GR + +
Sbjct: 1256 DRCVANAYNLEPGKVGCKPCDCSKTGSSNQ---------QCDES-----GRCSCKTGFEG 1301
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGH--------GGSLNLQCN------SEGRCQCKPGV 190
K RC D Y + GG+ +C S+ C+CK V
Sbjct: 1302 EK-----------CNRCTFDYYNYPNCRKCGCDIGGTRPEECINGLCKCSQDGCKCKANV 1350
Query: 191 TGDKCDRCDVNHYDFGE---AGCKSCECN 216
G C++C V + AGC C C+
Sbjct: 1351 EGRHCNKCKVGTFGIFPTHIAGCLDCFCS 1379
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
C CK G +G +CD+C+ +++ +AG C+ C CN GS + CD GQC+CK
Sbjct: 1646 CICKRGYSGHRCDKCENDYWGNPQAGGTCQPCNCNAYGS--ESLKCDKTTGQCKCKPGFT 1703
Query: 242 GAQC 245
G +C
Sbjct: 1704 GEKC 1707
>gi|156121053|ref|NP_001095673.1| netrin-4 precursor [Bos taurus]
gi|154426108|gb|AAI51287.1| NTN4 protein [Bos taurus]
gi|296487433|tpg|DAA29546.1| TPA: netrin 4 [Bos taurus]
Length = 627
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y S +
Sbjct: 332 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C +C+C+P+GS L +S G C CKPGV G C+RC V ++ FG+ GC+ C+C
Sbjct: 392 CKSCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD G C S+
Sbjct: 452 --AGS------CDPHTGDCLSS 465
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 20/98 (20%)
Query: 156 WDLRR-------CKR-DTYPLGHG----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
WDLRR CK +P+G S+ S G C CKPGV G C+RC V ++
Sbjct: 380 WDLRRPFSAPDACKSCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYW 439
Query: 204 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
FG+ GC+ C+C AGS CD G C +++
Sbjct: 440 GFGDYGCRPCDC--AGS------CDPHTGDCLSSTDID 469
>gi|20147503|gb|AAM12527.1|AF443072_1 laminin alpha5 chain precursor [Homo sapiens]
Length = 3695
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 602 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 657
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 658 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 707
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G ++ C C+ V G CDR
Sbjct: 708 DTCVPGAYNFP----------YCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDR 757
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+ G++ C GQC CK +V G C S
Sbjct: 758 CKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 810
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1864 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFMSSRDDPSAPCVSCP 1914
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1915 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1974
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1975 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGN-------CTRCDCTP 2027
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2028 CGTEA-----CDPHSGHCLCKAGVTGRRCDRCQEGHFGFNGCGGCRPCACGPAAEGS--- 2079
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2080 ECHPQSGQCHCRPGTMGPQCR 2100
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 80/210 (38%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1971 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC 2025
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 2026 TPCGTEACDPHS-GHCLCKAGVTGRRCDRCQEGHFGFNGCGGCRPCACGPAAEGSE---C 2081
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G QC
Sbjct: 2082 HPQSGQCHCR----------------------PGTMGPQCRECAPGYWGLPEQGCRRCQC 2119
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2120 PGGRCDPHTGRCNCPPGLSGERCDTCSQQH 2149
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1438 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1488
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1489 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1526
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1527 ECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1584
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1585 APGV--CDPLTGQCYCKENVQGPKC 1607
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G CDR
Sbjct: 562 CRVGFEGATCDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDR 618
Query: 89 CDVNHYDFGEAGCKSCECNPAGSV 112
C ++ F C++C C+P G++
Sbjct: 619 CRPGYHGF--PNCQACTCDPRGAL 640
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 494 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 550
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL--- 168
+ CD GQC + R F+ A RC + PL
Sbjct: 551 D--RCDPDTGQC-----------------RCRVGFEGA-----TCDRCAPGYFHFPLCQL 586
Query: 169 ---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 587 CGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALDQL- 643
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 644 -CGA-GGLCRCRPGYTGTACQ 662
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C CKP V G
Sbjct: 746 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 805
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 806 QACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 848
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C+C P G CD G+C C +
Sbjct: 2086 GQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGRCNCPPGLS 2138
Query: 242 GAQC 245
G +C
Sbjct: 2139 GERC 2142
>gi|21264602|ref|NP_005551.3| laminin subunit alpha-5 precursor [Homo sapiens]
gi|317373598|sp|O15230.8|LAMA5_HUMAN RecName: Full=Laminin subunit alpha-5; AltName: Full=Laminin-10
subunit alpha; AltName: Full=Laminin-11 subunit alpha;
AltName: Full=Laminin-15 subunit alpha; Flags: Precursor
Length = 3695
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 602 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 657
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 658 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 707
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G ++ C C+ V G CDR
Sbjct: 708 DTCVPGAYNFP----------YCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDR 757
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+ G++ C GQC CK +V G C S
Sbjct: 758 CKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 810
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1864 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFVSSRDDPSAPCVSCP 1914
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1915 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1974
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1975 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGN-------CTRCDCTP 2027
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2028 CGTEA-----CDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS--- 2079
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2080 ECHPQSGQCHCRPGTMGPQCR 2100
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 80/210 (38%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1971 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC 2025
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 2026 TPCGTEACDPHS-GHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---C 2081
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G QC
Sbjct: 2082 HPQSGQCHCR----------------------PGTMGPQCRECAPGYWGLPEQGCRRCQC 2119
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2120 PGGRCDPHTGRCNCPPGLSGERCDTCSQQH 2149
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1438 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1488
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1489 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1526
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1527 ECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1584
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1585 APGV--CDPLTGQCYCKENVQGPKC 1607
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G CDR
Sbjct: 562 CRVGFEGATCDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDR 618
Query: 89 CDVNHYDFGEAGCKSCECNPAGSV 112
C ++ F C++C C+P G++
Sbjct: 619 CRPGYHGF--PNCQACTCDPRGAL 640
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 494 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 550
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL--- 168
+ CD GQC + R F+ A RC + PL
Sbjct: 551 D--RCDPDTGQC-----------------RCRVGFEGA-----TCDRCAPGYFHFPLCQL 586
Query: 169 ---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 587 CGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALDQL- 643
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 644 -CGA-GGLCRCRPGYTGTACQ 662
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C CKP V G
Sbjct: 746 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 805
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 806 QACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 848
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C+C P G CD G+C C +
Sbjct: 2086 GQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGRCNCPPGLS 2138
Query: 242 GAQC 245
G +C
Sbjct: 2139 GERC 2142
>gi|410952084|ref|XP_003982718.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-1 [Felis
catus]
Length = 2188
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 105/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ Y+Q +
Sbjct: 737 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYFQHPERDVRDPHL 796
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ C+ C Y G
Sbjct: 797 CERCTCDPAGSENGGICDSYTDFSAGLIAGQCRCKLHVEGEHCELCKEGFYGLSAEDPFG 856
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 857 CKSCACNPLGTIPGGNPCDSETGYCYCK------------RLVTGQHCDQCLPEHWGLSN 904
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C+ E G+C C+P V G +C+ + +Y
Sbjct: 905 DLDGCRPCDCDL-----GGALNNSCSPESGQCACRPHVIGRQCNEVESGYY 950
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G CDRC
Sbjct: 1152 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCDRCAPG 1211
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV CD + GQC
Sbjct: 1212 TFGFGPSGCKPCECHLQGSVNAF--CDPITGQC 1242
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G C+ CR YY + C C CN +G++ CN + G+C
Sbjct: 1397 GRCLKCLYHTEGDQCQLCRLGYYGDALRQDCRKCVCNYLGTVQDHCNGSDCQCDKTTGQC 1456
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N + GC C C+PA S P+C+ GQC+ G
Sbjct: 1457 SCLPNVVGQNCDRCAPNTWQLASGTGCDPCSCDPAHSFG--PSCNEFTGQCQCMP-GFGG 1513
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E ++ F G+ + R C D G QC+ S GRC C GV G
Sbjct: 1514 RTCSE----CQELF--WGDPNVECRACDCDPR-----GIETPQCDQSTGRCVCVEGVEGP 1562
Query: 194 KCDRC 198
+CD+C
Sbjct: 1563 RCDKC 1567
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 103/286 (36%), Gaps = 79/286 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G C CQ G NCE+C YY
Sbjct: 1269 CQCNGHADDC---------DSATGACSGCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPC 1319
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFG 97
SG F +C +P+ +L L C C PG G +CD C + D G
Sbjct: 1320 PCPDGPDSGRQFANSCYQDPV-TLQLA------CVCNPGYVGSRCDDCASGFFGNPSDVG 1372
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRKNF 148
C+ CEC+ + CD G+C + QL G LR
Sbjct: 1373 -GSCQPCECHGNIDTTDPEACDRETGRCLKCLYHTEGDQCQLCRLGYYGDALR------- 1424
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDV 200
D R+C + G++ CN + G+C C P V G CDRC
Sbjct: 1425 -------QDCRKCV-----CNYLGTVQDHCNGSDCQCDKTTGQCSCLPNVVGQNCDRCAP 1472
Query: 201 NHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N + GC C C+PA S P+C+ GQC+C G C
Sbjct: 1473 NTWQLASGTGCDPCSCDPAHSFG--PSCNEFTGQCQCMPGFGGRTC 1516
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 112/257 (43%), Gaps = 47/257 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE C D Y+ + N C CNCN S L
Sbjct: 698 GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLAT 756
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDS 120
S G C C+ G C++C ++ E C+ C C+PAGS +N CDS
Sbjct: 757 GNVSGGVCDDCQHNTMGRNCEQCKPFYFQHPERDVRDPHLCERCTCDPAGS-ENGGICDS 815
Query: 121 --------VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHG 171
+ GQC +L G H EL ++ F G D CK PLG
Sbjct: 816 YTDFSAGLIAGQCR-CKLHVEGE-HCEL---CKEGF--YGLSAEDPFGCKSCACNPLGTI 868
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCD 228
N C+SE G C CK VTG CD+C H+ GC+ C+C+ G++ N+ C
Sbjct: 869 PGGN-PCDSETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNS--CS 925
Query: 229 SVKGQCECKDNVEGAQC 245
GQC C+ +V G QC
Sbjct: 926 PESGQCACRPHVIGRQC 942
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 98/238 (41%), Gaps = 30/238 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G + C C C+ GS+N C+ G+C C GV
Sbjct: 1191 GGQC-QCRPNVVGRTCDRCAPGTF-GFGPSGCKPCECHLQGSVNAFCDPITGQCHCFQGV 1248
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CDS G C Q + G H R
Sbjct: 1249 YARQCDRCLPGYWGF--PSCQPCQCN-----GHADDCDSATGACSGCQDYTTG--HNCER 1299
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 1300 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFANSCYQDPVTLQLA----CVCNPGYVGS 1355
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + D G C+ CEC+ + CD G+C +C + EG QC+
Sbjct: 1356 RCDDCASGFFGNPSDVG-GSCQPCECHGNIDTTDPEACDRETGRCLKCLYHTEGDQCQ 1412
>gi|119622036|gb|EAX01631.1| laminin, alpha 1, isoform CRA_d [Homo sapiens]
Length = 2952
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 104/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GS + C+ E G C CK
Sbjct: 868 GECLKCLGNTDGAHCERCADGFY---GDAVTAKNCRACECHVKGSHSAVCHLETGLCDCK 924
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC+ C C+ AGSV + C +GQC
Sbjct: 925 PNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--GCTD-EGQCHCVP-------- 973
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC Y G C+ E G C C P
Sbjct: 974 -----------GVAGKRC---DRCAHGFYAYQDGSCTPCDCPHTQNTCDPETGECVCPPH 1019
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ + E GC++C C+ GS + CD V G C+CK G C
Sbjct: 1020 TQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHH--RCDVVTGHCQCKSKFGGRAC 1074
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D K+ N G GG C++C + G NCE C D YY+
Sbjct: 327 CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETCIDGYYRPHKV 386
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C CNC+P+GSL+ C + G+C CK G TG+KCDRC + +
Sbjct: 387 SPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLHNGKQPGQCPCKEGYTGEKCDRCQLGYK 446
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
D+ C SC CNP GS + P
Sbjct: 447 DY--PTCVSCGCNPVGSASDEP 466
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG+KCDRC + + D+ C SC CNP GS + P G C CK+NVE
Sbjct: 425 GQCPCKEGYTGEKCDRCQLGYKDY--PTCVSCGCNPVGSASDEP----CTGPCVCKENVE 478
Query: 242 GAQC 245
G C
Sbjct: 479 GKAC 482
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C G CE+C D ++ + C ACNC+ +GS + +C+ G CQCK
Sbjct: 1012 GECV-CPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGHCQCKSKFG 1070
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD+C + + DF + C C+C+ G+
Sbjct: 1071 GRACDQCSLGYRDFPD--CVPCDCDLRGT 1097
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCTACNCNPIGSLN-------LQCNS 71
G C+ C + G +CE+C +Y + GD C C C + N L
Sbjct: 755 GVCIACAHNTTGVHCEQCLPGFYGEPSRGTPGD--CQPCACPLTIASNNFSPTCHLNDGD 812
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
E C C PG +G C+RC +Y C C+C+ +CDSV G+C
Sbjct: 813 EVVCDWCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPSEAGHCDSVTGECLK 872
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ GS + C+ E G C C
Sbjct: 873 CLGNTDG-AHCE---RCADGFYGDAVTAKNCRACECHV-----KGSHSAVCHLETGLCDC 923
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KP VTG +CD+C +Y GC+ C C+ AGSV + C +GQC C V G +C
Sbjct: 924 KPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--GCTD-EGQCHCVPGVAGKRC 980
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H C C +G +CE+C +YY Q G + C C+CNP GS++ C+ + G+C C
Sbjct: 1472 HDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGS-CQKCDCNPHGSVHGDCDRTSGQCVC 1530
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+ G +G +CD C+ H E C SC+ G + N
Sbjct: 1531 RLGASGLRCDECEPRHI-LMETDCVSCDDECVGVLLN 1566
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQCNSEG----RC 75
G CL+C + G +C+ C YY K + D AC +P S + C EG RC
Sbjct: 1417 GKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPASFSPTCVLEGDHDFRC 1476
Query: 76 -QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C G G C+RC ++Y + C+ C+CNP GSV +CD GQC
Sbjct: 1477 DACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTSGQC 1528
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 176 LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVK 231
L+ + + RC C G G C+RC ++Y + C+ C+CNP GSV +CD
Sbjct: 1468 LEGDHDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTS 1525
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 1526 GQCVCRLGASGLRC 1539
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQC 234
G CQCK G CD+C + + DF + C C+C+ G+ + N C G C
Sbjct: 1061 GHCQCKSKFGGRACDQCSLGYRDFPD--CVPCDCDLRGTSGDACNLEQGLCGCVEETGAC 1118
Query: 235 ECKDNVEGAQC 245
CK+NV G QC
Sbjct: 1119 PCKENVFGPQC 1129
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNSEGRCQCKPGVTGDKCD 87
C+ G C++C+ Y C +C CNP+GS + + C G C CK V G CD
Sbjct: 429 CKEGYTGEKCDRCQLGYKDYPT---CVSCGCNPVGSASDEPCT--GPCVCKENVEGKACD 483
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
RC Y+ E GC C C
Sbjct: 484 RCKPGFYNLKEKNPRGCSECFC 505
>gi|426225037|ref|XP_004006674.1| PREDICTED: netrin-4 isoform 1 [Ovis aries]
Length = 628
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 37/216 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y S +
Sbjct: 332 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G C+RC V ++ FG+ GC+ C+C
Sbjct: 392 CKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
AGS CD G C LSS + V + W+ + ++
Sbjct: 452 --AGS------CDPHTGDC----LSSSTDIDWYHEVPDFHSMHNKSEPTWEWKD-EQGFS 498
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
L H G+C+CK V G+ C + +
Sbjct: 499 ALRH----------SGKCECKEQVLGNSKAFCGMKY 524
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 20/91 (21%)
Query: 156 WDLRR-------CKR-DTYPLGHG----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
WDLRR CK +P+G S+ S G C CKPGV G C+RC V ++
Sbjct: 380 WDLRRPFSAPDACKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYW 439
Query: 204 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
FG+ GC+ C+C AGS CD G C
Sbjct: 440 GFGDYGCRPCDC--AGS------CDPHTGDC 462
>gi|119595780|gb|EAW75374.1| laminin, alpha 5, isoform CRA_c [Homo sapiens]
Length = 3690
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 602 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 657
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 658 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 707
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G ++ C C+ V G CDR
Sbjct: 708 DTCVPGAYNFP----------YCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDR 757
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+ G++ C GQC CK +V G C S
Sbjct: 758 CKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 810
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1864 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFVSSRDDPSTPCVSCP 1914
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1915 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1974
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1975 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGN-------CTRCDCTP 2027
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2028 CGTEA-----CDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS--- 2079
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2080 ECHPQSGQCHCRPGTMGPQCR 2100
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 80/210 (38%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1971 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC 2025
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 2026 TPCGTEACDPHS-GHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---C 2081
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G QC
Sbjct: 2082 HPQSGQCHCR----------------------PGTMGPQCRECAPGYWGLPEQGCRRCQC 2119
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2120 PGGRCDPHTGRCNCPPGLSGERCDTCSQQH 2149
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1438 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1488
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1489 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1526
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1527 ECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1584
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1585 APGV--CDPLTGQCYCKENVQGPKC 1607
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G CDR
Sbjct: 562 CRVGFEGATCDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDR 618
Query: 89 CDVNHYDFGEAGCKSCECNPAGSV 112
C ++ F C++C C+P G++
Sbjct: 619 CRPGYHGF--PNCQACTCDPRGAL 640
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 81/204 (39%), Gaps = 49/204 (24%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 494 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 550
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPL 168
+ CD GQC + R F+ A C R +PL
Sbjct: 551 D--RCDPDTGQC-----------------RCRVGFEGA--------TCDRCAPGYFHFPL 583
Query: 169 ------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 584 CQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALD 641
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 642 QL--CGA-GGLCRCRPGYTGTACQ 662
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C CKP V G
Sbjct: 746 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 805
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 806 QACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 848
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C+C P G CD G+C C +
Sbjct: 2086 GQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGRCNCPPGLS 2138
Query: 242 GAQC 245
G +C
Sbjct: 2139 GERC 2142
>gi|38788416|ref|NP_005550.2| laminin subunit alpha-1 precursor [Homo sapiens]
gi|281185471|sp|P25391.2|LAMA1_HUMAN RecName: Full=Laminin subunit alpha-1; AltName: Full=Laminin A chain;
AltName: Full=Laminin-1 subunit alpha; AltName:
Full=Laminin-3 subunit alpha; AltName: Full=S-laminin
subunit alpha; Short=S-LAM alpha; Flags: Precursor
gi|225000842|gb|AAI72449.1| Laminin, alpha 1 [synthetic construct]
Length = 3075
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 104/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GS + C+ E G C CK
Sbjct: 868 GECLKCLGNTDGAHCERCADGFY---GDAVTAKNCRACECHVKGSHSAVCHLETGLCDCK 924
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC+ C C+ AGSV + C +GQC
Sbjct: 925 PNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--GCTD-EGQCHCVP-------- 973
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC Y G C+ E G C C P
Sbjct: 974 -----------GVAGKRC---DRCAHGFYAYQDGSCTPCDCPHTQNTCDPETGECVCPPH 1019
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ + E GC++C C+ GS + CD V G C+CK G C
Sbjct: 1020 TQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHH--RCDVVTGHCQCKSKFGGRAC 1074
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D K+ N G GG C++C + G NCE C D YY+
Sbjct: 327 CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETCIDGYYRPHKV 386
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C CNC+P+GSL+ C + G+C CK G TG+KCDRC + +
Sbjct: 387 SPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLHNGKQPGQCPCKEGYTGEKCDRCQLGYK 446
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
D+ C SC CNP GS + P
Sbjct: 447 DY--PTCVSCGCNPVGSASDEP 466
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG+KCDRC + + D+ C SC CNP GS + P G C CK+NVE
Sbjct: 425 GQCPCKEGYTGEKCDRCQLGYKDY--PTCVSCGCNPVGSASDEP----CTGPCVCKENVE 478
Query: 242 GAQC 245
G C
Sbjct: 479 GKAC 482
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C G CE+C D ++ + C ACNC+ +GS + +C+ G CQCK
Sbjct: 1012 GECV-CPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGHCQCKSKFG 1070
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD+C + + DF + C C+C+ G+
Sbjct: 1071 GRACDQCSLGYRDFPD--CVPCDCDLRGT 1097
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCTACNCNPIGSLN-------LQCNS 71
G C+ C + G +CE+C +Y + GD C C C + N L
Sbjct: 755 GVCIACAHNTTGVHCEQCLPGFYGEPSRGTPGD--CQPCACPLTIASNNFSPTCHLNDGD 812
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
E C C PG +G C+RC +Y C C+C+ +CDSV G+C
Sbjct: 813 EVVCDWCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPSEAGHCDSVTGECLK 872
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ GS + C+ E G C C
Sbjct: 873 CLGNTDG-AHCE---RCADGFYGDAVTAKNCRACECHV-----KGSHSAVCHLETGLCDC 923
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KP VTG +CD+C +Y GC+ C C+ AGSV + C +GQC C V G +C
Sbjct: 924 KPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--GCTD-EGQCHCVPGVAGKRC 980
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H C C +G +CE+C +YY Q G + C C+CNP GS++ C+ + G+C C
Sbjct: 1472 HDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGS-CQKCDCNPHGSVHGDCDRTSGQCVC 1530
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+ G +G +CD C+ H E C SC+ G + N
Sbjct: 1531 RLGASGLRCDECEPRHI-LMETDCVSCDDECVGVLLN 1566
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQCNSEG----RC 75
G CL+C + G +C+ C YY K + D AC +P S + C EG RC
Sbjct: 1417 GKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPASFSPTCVLEGDHDFRC 1476
Query: 76 -QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C G G C+RC ++Y + C+ C+CNP GSV +CD GQC
Sbjct: 1477 DACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTSGQC 1528
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 176 LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVK 231
L+ + + RC C G G C+RC ++Y + C+ C+CNP GSV +CD
Sbjct: 1468 LEGDHDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTS 1525
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 1526 GQCVCRLGASGLRC 1539
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQC 234
G CQCK G CD+C + + DF + C C+C+ G+ + N C G C
Sbjct: 1061 GHCQCKSKFGGRACDQCSLGYRDFPD--CVPCDCDLRGTSGDACNLEQGLCGCVEETGAC 1118
Query: 235 ECKDNVEGAQC 245
CK+NV G QC
Sbjct: 1119 PCKENVFGPQC 1129
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNSEGRCQCKPGVTGDKCD 87
C+ G C++C+ Y C +C CNP+GS + + C G C CK V G CD
Sbjct: 429 CKEGYTGEKCDRCQLGYKDYPT---CVSCGCNPVGSASDEPCT--GPCVCKENVEGKACD 483
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
RC Y+ E GC C C
Sbjct: 484 RCKPGFYNLKEKNPRGCSECFC 505
>gi|119595778|gb|EAW75372.1| laminin, alpha 5, isoform CRA_a [Homo sapiens]
Length = 3695
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 602 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 657
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 658 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 707
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G ++ C C+ V G CDR
Sbjct: 708 DTCVPGAYNFP----------YCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDR 757
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+ G++ C GQC CK +V G C S
Sbjct: 758 CKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 810
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1864 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFVSSRDDPSTPCVSCP 1914
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1915 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1974
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1975 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGN-------CTRCDCTP 2027
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2028 CG-----TEACDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS--- 2079
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2080 ECHPQSGQCHCRPGTMGPQCR 2100
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 80/210 (38%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1971 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC 2025
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 2026 TPCGTEACDPHS-GHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---C 2081
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G QC
Sbjct: 2082 HPQSGQCHCR----------------------PGTMGPQCRECAPGYWGLPEQGCRRCQC 2119
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2120 PGGRCDPHTGRCNCPPGLSGERCDTCSQQH 2149
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1438 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1488
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1489 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1526
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1527 ECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1584
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1585 APGV--CDPLTGQCYCKENVQGPKC 1607
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G CDR
Sbjct: 562 CRVGFEGATCDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDR 618
Query: 89 CDVNHYDFGEAGCKSCECNPAGSV 112
C ++ F C++C C+P G++
Sbjct: 619 CRPGYHGF--PNCQACTCDPRGAL 640
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 81/204 (39%), Gaps = 49/204 (24%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 494 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 550
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPL 168
+ CD GQC + R F+ A C R +PL
Sbjct: 551 D--RCDPDTGQC-----------------RCRVGFEGA--------TCDRCAPGYFHFPL 583
Query: 169 ------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 584 CQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALD 641
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 642 QL--CGA-GGLCRCRPGYTGTACQ 662
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C CKP V G
Sbjct: 746 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 805
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 806 QACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 848
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C+C P G CD G+C C +
Sbjct: 2086 GQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGRCNCPPGLS 2138
Query: 242 GAQC 245
G +C
Sbjct: 2139 GERC 2142
>gi|351705789|gb|EHB08708.1| Multiple epidermal growth factor-like domains 9 [Heterocephalus
glaber]
Length = 407
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 18/224 (8%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+CQ G +CE C++ +Y C C+C+P G+L+ CNS G CQC+ GVTG C+
Sbjct: 30 ECQQGYQGLHCETCKEGFYMNHTSGLCLPCHCSPQGALSKLCNSSGNCQCRVGVTGFTCN 89
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C +Y F + GC C+CN + +CD+ G C + Q +S+G E + ++
Sbjct: 90 QCQDGYYGFNKNGCLPCQCN-----NRSASCDARTGVCLNCQENSKGDHCEECKEGFYQS 144
Query: 148 FDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYD 204
P+ +RC + G+ ++ + E +C QCK G TG C++C+ +Y+
Sbjct: 145 PYPS-------KRCLHCPCSAVTSTGNCTIELDELEPKCVQCKDGYTGQNCNKCENGYYN 197
Query: 205 FGEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
++ C C+C+ TP C G+C C N G C
Sbjct: 198 -SDSICIPCQCHGHVDPIKTPKICRPESGECINCLHNTSGFWCE 240
>gi|119622034|gb|EAX01629.1| laminin, alpha 1, isoform CRA_b [Homo sapiens]
Length = 2714
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 104/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GS + C+ E G C CK
Sbjct: 630 GECLKCLGNTDGAHCERCADGFY---GDAVTAKNCRACECHVKGSHSAVCHLETGLCDCK 686
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC+ C C+ AGSV + C +GQC
Sbjct: 687 PNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--GCTD-EGQCHCVP-------- 735
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC Y G C+ E G C C P
Sbjct: 736 -----------GVAGKRC---DRCAHGFYAYQDGSCTPCDCPHTQNTCDPETGECVCPPH 781
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ + E GC++C C+ GS + CD V G C+CK G C
Sbjct: 782 TQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHH--RCDVVTGHCQCKSKFGGRAC 836
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D K+ N G GG C++C + G NCE C D YY+
Sbjct: 89 CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETCIDGYYRPHKV 148
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C CNC+P+GSL+ C + G+C CK G TG+KCDRC + +
Sbjct: 149 SPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLHNGKQPGQCPCKEGYTGEKCDRCQLGYK 208
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
D+ C SC CNP GS + P
Sbjct: 209 DY--PTCVSCGCNPVGSASDEP 228
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG+KCDRC + + D+ C SC CNP GS + P G C CK+NVE
Sbjct: 187 GQCPCKEGYTGEKCDRCQLGYKDY--PTCVSCGCNPVGSASDEP----CTGPCVCKENVE 240
Query: 242 GAQC 245
G C
Sbjct: 241 GKAC 244
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C G CE+C D ++ + C ACNC+ +GS + +C+ G CQCK
Sbjct: 774 GECV-CPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGHCQCKSKFG 832
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD+C + + DF + C C+C+ G+
Sbjct: 833 GRACDQCSLGYRDFPD--CVPCDCDLRGT 859
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCTACNCNPIGSLN-------LQCNS 71
G C+ C + G +CE+C +Y + GD C C C + N L
Sbjct: 517 GVCIACAHNTTGVHCEQCLPGFYGEPSRGTPGD--CQPCACPLTIASNNFSPTCHLNDGD 574
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
E C C PG +G C+RC +Y C C+C+ +CDSV G+C
Sbjct: 575 EVVCDWCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPSEAGHCDSVTGECLK 634
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ GS + C+ E G C C
Sbjct: 635 CLGNTDG-AHCE---RCADGFYGDAVTAKNCRACECHV-----KGSHSAVCHLETGLCDC 685
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KP VTG +CD+C +Y GC+ C C+ AGSV + C +GQC C V G +C
Sbjct: 686 KPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--GCTD-EGQCHCVPGVAGKRC 742
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H C C +G +CE+C +YY Q G + C C+CNP GS++ C+ + G+C C
Sbjct: 1234 HDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGS-CQKCDCNPHGSVHGDCDRTSGQCVC 1292
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+ G +G +CD C+ H E C SC+ G + N
Sbjct: 1293 RLGASGLRCDECEPRHI-LMETDCVSCDDECVGVLLN 1328
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQCNSEG----RC 75
G CL+C + G +C+ C YY K + D AC +P S + C EG RC
Sbjct: 1179 GKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPASFSPTCVLEGDHDFRC 1238
Query: 76 -QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C G G C+RC ++Y + C+ C+CNP GSV +CD GQC
Sbjct: 1239 DACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTSGQC 1290
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 176 LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVK 231
L+ + + RC C G G C+RC ++Y + C+ C+CNP GSV +CD
Sbjct: 1230 LEGDHDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTS 1287
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 1288 GQCVCRLGASGLRC 1301
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQC 234
G CQCK G CD+C + + DF + C C+C+ G+ + N C G C
Sbjct: 823 GHCQCKSKFGGRACDQCSLGYRDFPD--CVPCDCDLRGTSGDACNLEQGLCGCVEETGAC 880
Query: 235 ECKDNVEGAQC 245
CK+NV G QC
Sbjct: 881 PCKENVFGPQC 891
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNSEGRCQCKPGVTGDKCD 87
C+ G C++C+ Y C +C CNP+GS + + C G C CK V G CD
Sbjct: 191 CKEGYTGEKCDRCQLGYKDYPT---CVSCGCNPVGSASDEPCT--GPCVCKENVEGKACD 245
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
RC Y+ E GC C C
Sbjct: 246 RCKPGFYNLKEKNPRGCSECFC 267
>gi|449666107|ref|XP_002168125.2| PREDICTED: laminin subunit beta-1-like [Hydra magnipapillata]
Length = 1818
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 111/274 (40%), Gaps = 91/274 (33%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG S++C FD +YN G GG C DCQ + G CE+C+ YY+ N
Sbjct: 340 CNCNGHSDKCHFDIAVYNANGKTSGGVCDDCQHNTHGRQCEQCKPLYYRDPFKNIFDPDV 399
Query: 54 CTACNCNPIGSLN----------LQCNSE-------GRCQCKPGVTGDKCDRCDVNHYDF 96
C C+C+P GS+ ++ SE G+C CK V G +CD+C ++
Sbjct: 400 CKQCDCDPSGSIGRGECETVSSVVKLGSEEHLSSIPGKCICKSNVEGKRCDQCKNGFWNL 459
Query: 97 GEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
E+ GC+SC C+ GSV+ CD G C
Sbjct: 460 LESKSEGCQSCNCDERGSVE-INKCDQQTGIC---------------------------- 490
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--GCK 211
RCKR+ V G C +C + G GC+
Sbjct: 491 ------RCKRN-------------------------VQGFTCSKCMDGFWALGSTKEGCQ 519
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+ GSV + CD + G C+CK N+ G QC
Sbjct: 520 KCGCDVGGSVSSV--CDDISGSCQCKRNIIGRQC 551
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ---CNS-EGRCQCKP 79
G C +C + G CE C+ +Y + C AC CN +G+ N CNS G+C C P
Sbjct: 1006 GKCFNCLNNAFGDFCETCKPGFYGNASKQSCKACECNSLGTNNNTGGYCNSVSGQCPCLP 1065
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G CD+C Y+ GC++C C+ GS+ T CD GQC+ ++ G+ +
Sbjct: 1066 NVVGMNCDKCADGFYEMIIGKGCRNCMCDLEGSLDGT--CDKTNGQCK-CRVGFGGQFCS 1122
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYP--LGHGGSLNLQCN-SEGRCQCKPGVTGDKC 195
E N W + + + GS +LQCN + G C+CKP V G+KC
Sbjct: 1123 ECE-----------NYSWGMPKTIKGCKACNCNPAGSADLQCNRTSGVCKCKPNVVGEKC 1171
Query: 196 DRC 198
D C
Sbjct: 1172 DMC 1174
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 107/236 (45%), Gaps = 25/236 (10%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ G C++C+ YY G C ACNC+ +GS NL C+ G C CK G+
Sbjct: 801 GGQC-PCKPGVIGRRCDRCKTGYY-GFGSEGCKACNCSRVGSKNLLCDDFTGECLCKEGL 858
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G C+ C NH FG CK C+C S CD+ G C + +++G +
Sbjct: 859 EGRTCNSCPKNH--FGFPDCKPCKCYGHSS-----TCDAATGVCNNCLHNTKG-----IN 906
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG---SLNLQCNSEGRC---QCKPGVTGDKC 195
Q K+ + C+R P G G S + G+ C G TG +C
Sbjct: 907 CQLCKDGYYGNALLGTENACQRCQCPGGSSGNQFSNTCELRDVGKVFCTNCSEGFTGTQC 966
Query: 196 DRCDVNHY--DFGEAG-CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCRS 247
++CD +Y + G CK C CN + +TP CDS G+C C +N G C +
Sbjct: 967 EKCDNGYYGNPLIQGGTCKKCLCNGNINSASTPKCDSATGKCFNCLNNAFGDFCET 1022
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 102/253 (40%), Gaps = 55/253 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNCNPIGSLNLQCNS-EGR----- 74
G C +C + G NC+ C+D YY + +N C C C S N N+ E R
Sbjct: 893 GVCNNCLHNTKGINCQLCKDGYYGNALLGTENACQRCQCPGGSSGNQFSNTCELRDVGKV 952
Query: 75 --CQCKPGVTGDKCDRCDVNHY--DFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C G TG +C++CD +Y + G CK C CN + +TP CDS G+C
Sbjct: 953 FCTNCSEGFTGTQCEKCDNGYYGNPLIQGGTCKKCLCNGNINSASTPKCDSATGKC---- 1008
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY--------------PLGHGGSL 174
F+ N D CK Y LG +
Sbjct: 1009 ------------------FNCLNNAFGDFCETCKPGFYGNASKQSCKACECNSLGTNNNT 1050
Query: 175 NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKG 232
CNS G+C C P V G CD+C Y+ GC++C C+ GS+ T CD G
Sbjct: 1051 GGYCNSVSGQCPCLPNVVGMNCDKCADGFYEMIIGKGCRNCMCDLEGSLDGT--CDKTNG 1108
Query: 233 QCECKDNVEGAQC 245
QC+C+ G C
Sbjct: 1109 QCKCRVGFGGQFC 1121
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 116/263 (44%), Gaps = 50/263 (19%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNP 61
N FSN C EL R C +C G CEKC + YY C C CN
Sbjct: 938 NQFSNTC----EL--RDVGKVFCTNCSEGFTGTQCEKCDNGYYGNPLIQGGTCKKCLCN- 990
Query: 62 IGSLNL----QCNSE-GRC-QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKN 114
G++N +C+S G+C C GD C+ C Y + + CK+CECN G+ N
Sbjct: 991 -GNINSASTPKCDSATGKCFNCLNNAFGDFCETCKPGFYGNASKQSCKACECNSLGTNNN 1049
Query: 115 TPN-CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYP 167
T C+SV GQC L N D + +++ R C D
Sbjct: 1050 TGGYCNSVSGQCPC------------LPNVVGMNCDKCADGFYEMIIGKGCRNCMCDL-- 1095
Query: 168 LGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE----AGCKSCECNPAGSVK 222
GSL+ C+ + G+C+C+ G G C C+ +Y +G GCK+C CNPAGS
Sbjct: 1096 ---EGSLDGTCDKTNGQCKCRVGFGGQFCSECE--NYSWGMPKTIKGCKACNCNPAGSAD 1150
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
C+ G C+CK NV G +C
Sbjct: 1151 --LQCNRTSGVCKCKPNVVGEKC 1171
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 12 FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN----- 66
+ K+L+ + + L+ ++ P+ K +N ++C+C+ G+++
Sbjct: 734 YYKDLWEKNNCLDYYLNPVLEKQVPDVCKKIQFSISTQLNNGASSCDCDVQGTVSTGLSE 793
Query: 67 -LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 124
L C S G +C CKPGV G +CDRC +Y FG GCK+C C+ GS KN CD G+
Sbjct: 794 KLTCESIGGQCPCKPGVIGRRCDRCKTGYYGFGSEGCKACNCSRVGS-KNLL-CDDFTGE 851
Query: 125 C 125
C
Sbjct: 852 C 852
>gi|291394126|ref|XP_002713624.1| PREDICTED: laminin, alpha 1 [Oryctolagus cuniculus]
Length = 3162
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 107/233 (45%), Gaps = 42/233 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C YY + C CNC+ GS + C+ EGRC C PGV GDKCDR
Sbjct: 1008 CKPHVTGKQCDQCLPGYYGLDLGHGCLPCNCSAAGSTSDDCSDEGRCHCAPGVAGDKCDR 1067
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C Y F + GC C C NT CD G+C +RG LR + ++
Sbjct: 1068 CSHGFYAFQDGGCSPCNC---AHTHNT--CDPQTGECLCPP-HTRG-----LRCEVCED- 1115
Query: 149 DPAGNRIWDLRR------CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
G D+ R C R GS QC++ G+C C+ G CD+C +
Sbjct: 1116 ---GYWGHDVERGCQACNCSR-------VGSATHQCDAISGQCPCRSAFGGRSCDQCSLG 1165
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKG---------QCECKDNVEGAQC 245
H DF + C C+C+ G++ +T CD +G C CK+NV G QC
Sbjct: 1166 HRDFPD--CVPCDCDLRGTLADT--CDLEQGLCSCAEETAACSCKENVLGLQC 1214
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 70/142 (49%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + N G GG C++C + G NCE C D YY+
Sbjct: 412 CNCHNKATDCYYDEHVAHQKRSLNIEGQFRGGGVCINCLQNTMGINCETCVDGYYRPHKV 471
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C C+C+P+GSL+ C + G+C CK G GDKCDRC +
Sbjct: 472 SPYEDEPCHPCDCDPVGSLSSVCVKDDLHSDLHNGKWPGQCACKEGYAGDKCDRCQFGYK 531
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
G C CEC+PAGSV + P
Sbjct: 532 --GYPSCVRCECSPAGSVNDDP 551
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C G CE C D Y+ + C ACNC+ +GS QC++ G+C C+
Sbjct: 1097 GECL-CPPHTRGLRCEVCEDGYWGHDVERGCQACNCSRVGSATHQCDAISGQCPCRSAFG 1155
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
G CD+C + H DF + C C+C+ G++ +T CD +G C A+
Sbjct: 1156 GRSCDQCSLGHRDFPD--CVPCDCDLRGTLADT--CDLEQGLCSCAE 1198
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G GDKCDRC + G C CEC+PAGSV + P + C CKDNVE
Sbjct: 510 GQCACKEGYAGDKCDRCQFGYK--GYPSCVRCECSPAGSVNDDPCAEP----CLCKDNVE 563
Query: 242 GAQC 245
G C
Sbjct: 564 GKDC 567
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 107/243 (44%), Gaps = 38/243 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCTACNCNPIGSL--------NLQCN 70
G CL C + G +CE+C +Y + GD C C C P+ + +L
Sbjct: 840 GVCLACAHNTTGDHCEQCLPGFYGEPSRGTPGD--CQPCAC-PLSTASNNFSPTCHLHDG 896
Query: 71 SEGRC-QCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ C QC G GD C+RC +Y GEA C C+C+ +CD V G+C
Sbjct: 897 EDMVCDQCALGYAGDWCERCADGYYGNPTVPGEA-CVPCDCSGNVDPSEPGHCDPVTGEC 955
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRC 184
++ G H E + F + R C D + G L C+ E G C
Sbjct: 956 LKCIGNTAGP-HCE---RCADGFYGDAVTAKNCRAC--DCHEKGSRSGL---CHPETGVC 1006
Query: 185 QCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
CKP VTG +CD+C +Y D G GC C C+ AGS + +C S +G+C C V G
Sbjct: 1007 SCKPHVTGKQCDQCLPGYYGLDLGH-GCLPCNCSAAGSTSD--DC-SDEGRCHCAPGVAG 1062
Query: 243 AQC 245
+C
Sbjct: 1063 DKC 1065
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C +G CE+C Y+ + C C+C+ GS++ C+ E G+C C+PG TG +
Sbjct: 1564 CAPGYEGQYCERCSSGYHGNPRMLGGRCRKCDCSLHGSVHSDCDRESGQCVCRPGATGLR 1623
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C++C+ H E+ C SC+ G + + + D+V S LSS
Sbjct: 1624 CEQCEPRHVVL-ESSCVSCDDECTGVLLD--DLDNVGDAILSVNLSS 1667
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACN 58
CNCN S+ C D E G CL+C G +C+ C Y+ K N C+ C
Sbjct: 1488 CNCNNHSDAC--DPE-------TGKCLNCSDHTAGDHCDVCAPGYFGKVIGLANDCSPCT 1538
Query: 59 C--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNP 108
C + S + C EG RC C PG G C+RC ++ C+ C+C+
Sbjct: 1539 CPYHYPASFSPTCVLEGDGDLRCDACAPGYEGQYCERCSSGYHGNPRMLGGRCRKCDCSL 1598
Query: 109 AGSVKNTPNCDSVKGQC 125
GSV + +CD GQC
Sbjct: 1599 HGSVHS--DCDRESGQC 1613
>gi|426225039|ref|XP_004006675.1| PREDICTED: netrin-4 isoform 2 [Ovis aries]
Length = 591
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 37/216 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y S +
Sbjct: 295 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAPDA 354
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L +S G C CKPGV G C+RC V ++ FG+ GC+ C+C
Sbjct: 355 CKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYWGFGDYGCRPCDC 414
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
AGS CD G C LSS + V + W+ + ++
Sbjct: 415 --AGS------CDPHTGDC----LSSSTDIDWYHEVPDFHSMHNKSEPTWEWKD-EQGFS 461
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
L H G+C+CK V G+ C + +
Sbjct: 462 ALRHS----------GKCECKEQVLGNSKAFCGMKY 487
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 20/91 (21%)
Query: 156 WDLRR-------CKR-DTYPLGHG----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
WDLRR CK +P+G S+ S G C CKPGV G C+RC V ++
Sbjct: 343 WDLRRPFSAPDACKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYW 402
Query: 204 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
FG+ GC+ C+C AGS CD G C
Sbjct: 403 GFGDYGCRPCDC--AGS------CDPHTGDC 425
>gi|400977322|pdb|4AQS|A Chain A, Laminin Beta1 Ln-Le1-4 Structure
Length = 525
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 100/218 (45%), Gaps = 31/218 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 318 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 377
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G++CD C YD G
Sbjct: 378 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYG 437
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R L + D G R
Sbjct: 438 CKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDG-----CRP 492
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
C D GG+LN C+ + G+C C P + G +C+
Sbjct: 493 CDCDL-----GGALNNSCSEDSGQCSCLPHMIGRQCNE 525
>gi|328792916|ref|XP_001122457.2| PREDICTED: laminin subunit beta-1 [Apis mellifera]
Length = 1774
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 109/225 (48%), Gaps = 34/225 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNCN +N C FD+ +Y R+G GG C DCQ + G NCE C+ YY S
Sbjct: 339 CNCNNHTNSCHFDETVYERSGRVSGGVCDDCQHNTRGQNCELCKPFYYHDVTKDISDSEA 398
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C C+C+ GSL+ L + GRC CK V G +C+RC +++F G
Sbjct: 399 CLPCDCDLGGSLDDGICDSRTDLLSGDESGRCHCKANVEGRRCNRCKYGYWNFDPENPEG 458
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C CN G++ N C+ V G+C + + + L + DP G
Sbjct: 459 CQACTCNTLGTIDNR-GCNMVTGECTCKRFVTARDCNQCLPEFWGLSEDPDG-------- 509
Query: 161 CKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
CK D P GGS C+ G+C+C+P V+G C++ + ++Y
Sbjct: 510 CKPCDCDP---GGSYENSCDVITGQCRCRPHVSGRTCNQPEQSYY 551
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCK 78
H G CL C + DG NC+ C+ +Y + + C C C+ +G+ + G+C C
Sbjct: 993 HTGRCLQCLYNTDGSNCQICKPGFYGNALEQDCQDCQCDVLGTDRNAGPCDHRTGQCPCL 1052
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CD C+ NH+ GC CEC+ GSV ++ C+ G CE R +
Sbjct: 1053 PHVIGLLCDSCEENHWRIASGQGCDPCECDAVGSVSDS--CNPYDGTCECRPGFGGRRCN 1110
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ + NF GN + C D GS + QC+ E G C C G+ G+KCD
Sbjct: 1111 -----ECQTNF--WGNPNVECYPCDCDL-----TGSASQQCDRETGTCICHKGIGGEKCD 1158
Query: 197 RCDVNHYDFGEAGCKSCECNPAG 219
+CD +Y + +CNP G
Sbjct: 1159 QCDRGYYGYAP------QCNPCG 1175
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 98/218 (44%), Gaps = 39/218 (17%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
YY G + +C CNP GS +L C S G C CKP V G +CDRC Y FG GC S
Sbjct: 764 YYVYDGAH---SCECNPTGSHSLLCESYGGICPCKPNVVGRRCDRCAPGTYGFGPEGCIS 820
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV--QSRKNFDPAGNRIWDLRRC 161
C+C+ G++ N CD G+C + R +T R Q F W+ C
Sbjct: 821 CDCDGVGALDNF--CDVETGRC-------KCRPNTYGRTCGQCEPGF-------WNFPHC 864
Query: 162 KRDTYPLGHGGSLNLQCNSE-GRC-QCKPGVTGDKCDRCDVNHYDFGEAG----CKSCEC 215
+R GH S C+S+ G C C+ TG CDRC +Y G C++C C
Sbjct: 865 QRCECN-GHAES----CDSKTGACINCRDYTTGHNCDRCIETYYGDPRIGVDIPCRACPC 919
Query: 216 ----NPAGSVKNTPNCDSVKGQ--CECKDNVEGAQCRS 247
+ S + + DSV CEC D G +C S
Sbjct: 920 PGTIDSGHSYAESCSLDSVTHDVICECFDGYTGPRCES 957
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 35 GPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-QCKPGVTGDKCDR 88
GP CE C +NY+ + C CNCN L L N GRC QC G C
Sbjct: 952 GPRCESCAENYFGHPEIPGGSCEFCNCNNNTDLRLAGNCDPHTGRCLQCLYNTDGSNCQI 1011
Query: 89 CDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC----ESAQLSSRGRVHTELRVQ 143
C Y + E C+ C+C+ G+ +N CD GQC L R+
Sbjct: 1012 CKPGFYGNALEQDCQDCQCDVLGTDRNAGPCDHRTGQCPCLPHVIGLLCDSCEENHWRIA 1071
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 202
S + DP C+ D GS++ CN +G C+C+PG G +C+ C N
Sbjct: 1072 SGQGCDP----------CECDAV-----GSVSDSCNPYDGTCECRPGFGGRRCNECQTNF 1116
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C C+C+ GS + CD G C C + G +C
Sbjct: 1117 WGNPNVECYPCDCDLTGSA--SQQCDRETGTCICHKGIGGEKC 1157
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKG 232
L + GRC CK V G +C+RC +++F GC++C CN G++ N C+ V G
Sbjct: 422 LSGDESGRCHCKANVEGRRCNRCKYGYWNFDPENPEGCQACTCNTLGTIDNR-GCNMVTG 480
Query: 233 QCECKDNVEGAQC 245
+C CK V C
Sbjct: 481 ECTCKRFVTARDC 493
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 96/266 (36%), Gaps = 89/266 (33%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG + C G C++C+ G NC++C + YY + D C AC
Sbjct: 867 CECNGHAESC---------DSKTGACINCRDYTTGHNCDRCIETYYGDPRIGVDIPCRAC 917
Query: 58 NC-NPIGSLNLQCNS--------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCE 105
C I S + S + C+C G TG +C+ C N++ E C+ C
Sbjct: 918 PCPGTIDSGHSYAESCSLDSVTHDVICECFDGYTGPRCESCAENYFGHPEIPGGSCEFCN 977
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
CN ++ NCD G+C
Sbjct: 978 CNNNTDLRLAGNCDPHTGRC---------------------------------------- 997
Query: 166 YPLGHGGSLNLQC--NSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
LQC N++G CQ CKPG G+ E C+ C+C+ G+
Sbjct: 998 ----------LQCLYNTDGSNCQICKPGFYGNAL-----------EQDCQDCQCDVLGTD 1036
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCRS 247
+N CD GQC C +V G C S
Sbjct: 1037 RNAGPCDHRTGQCPCLPHVIGLLCDS 1062
>gi|119622033|gb|EAX01628.1| laminin, alpha 1, isoform CRA_a [Homo sapiens]
Length = 2703
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 104/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GS + C+ E G C CK
Sbjct: 708 GECLKCLGNTDGAHCERCADGFY---GDAVTAKNCRACECHVKGSHSAVCHLETGLCDCK 764
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC+ C C+ AGSV + C +GQC
Sbjct: 765 PNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--GCTD-EGQCHCVP-------- 813
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC Y G C+ E G C C P
Sbjct: 814 -----------GVAGKRC---DRCAHGFYAYQDGSCTPCDCPHTQNTCDPETGECVCPPH 859
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ + E GC++C C+ GS + CD V G C+CK G C
Sbjct: 860 TQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHH--RCDVVTGHCQCKSKFGGRAC 914
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG+KCDRC + + D+ C SC CNP GS + P G C CK+NVE
Sbjct: 310 GQCPCKEGYTGEKCDRCQLGYKDY--PTCVSCGCNPVGSASDEP----CTGPCVCKENVE 363
Query: 242 GAQC 245
G C
Sbjct: 364 GKAC 367
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C G CE+C D ++ + C ACNC+ +GS + +C+ G CQCK
Sbjct: 852 GECV-CPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGHCQCKSKFG 910
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD+C + + DF + C C+C+ G+
Sbjct: 911 GRACDQCSLGYRDFPD--CVPCDCDLRGT 937
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
G+C CK G TG+KCDRC + + D+ C SC CNP GS + P
Sbjct: 310 GQCPCKEGYTGEKCDRCQLGYKDY--PTCVSCGCNPVGSASDEP 351
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 40 KCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYD 95
+C +YY Q G + C C+CNP GS++ C+ + G+C C+ G +G +CD C+ H
Sbjct: 1231 RCSSSYYGNPQTPGGS-CQKCDCNPHGSVHGDCDRTSGQCVCRLGASGLRCDECEPRHI- 1288
Query: 96 FGEAGCKSCECNPAGSVKN 114
E C SC+ G + N
Sbjct: 1289 LMETDCVSCDDECVGVLLN 1307
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNSEGRCQCKPGVTGDKCD 87
C+ G C++C+ Y C +C CNP+GS + + C G C CK V G CD
Sbjct: 314 CKEGYTGEKCDRCQLGYKDYPT---CVSCGCNPVGSASDEPCT--GPCVCKENVEGKACD 368
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
RC Y+ E GC C C
Sbjct: 369 RCKPGFYNLKEKNPRGCSECFC 390
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQC 234
G CQCK G CD+C + + DF + C C+C+ G+ + N C G C
Sbjct: 901 GHCQCKSKFGGRACDQCSLGYRDFPD--CVPCDCDLRGTSGDACNLEQGLCGCVEETGAC 958
Query: 235 ECKDNVEGAQC 245
CK+NV G QC
Sbjct: 959 PCKENVFGPQC 969
>gi|395829511|ref|XP_003787900.1| PREDICTED: laminin subunit alpha-5 [Otolemur garnettii]
Length = 3693
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 107/232 (46%), Gaps = 32/232 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
GHC C+ + GP+C+ C Y+ G C AC+C+P G+L+ C++ G C C+PG G
Sbjct: 607 GHC-PCRPEFAGPHCDHCHPGYH---GYPDCHACSCDPRGALDPLCSAGGLCHCRPGYAG 662
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR-- 141
C C + F + C SC C+ G++ + CD+ GQC S R RV T LR
Sbjct: 663 ATCQECSPGFHGFPD--CVSCHCSVDGALHSA--CDAQSGQC-----SCRPRV-TGLRCE 712
Query: 142 --VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
V NF C+ + +P G + + ++ C C+ V G CDRC
Sbjct: 713 MCVPGAYNFP----------FCEVGSCHPAGLASADPARPETQPSCTCRAHVEGPSCDRC 762
Query: 199 DVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ + GC C C+P G++ C GQC CK +V G C +
Sbjct: 763 KPGFWGLNPSIPEGCTRCSCDPRGTLGGVAECQQGNGQCFCKPHVCGRTCAA 814
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 102/259 (39%), Gaps = 59/259 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G +N C++D E+ R GG C+DCQ G NCE C +Y+
Sbjct: 362 CNCHGHANDCYYDSEVDRRHASQSQDGTYQGGGVCIDCQHHTTGINCELCLPGFYRTPDQ 421
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC + + GRC C+P TG++CD C G G C
Sbjct: 422 PLDSPHICRRCNCESDFTDGTCEDLTGRCYCQPNFTGERCDMCAE-----GFVGFPHCYP 476
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P+ S +T GQ + S+ G GN C++D
Sbjct: 477 VPSFSPNDTGEQVLPAGQIVNCDCSAAGT---------------QGN------ACRKDP- 514
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
GRC CKP G C+ C Y GC+ C+C+ G + +
Sbjct: 515 -------------RVGRCVCKPNFHGAHCELCAPGFYG---PGCQPCQCSSPGVIDG--H 556
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC+C+ EGA C
Sbjct: 557 CDPDTGQCKCRLGFEGASC 575
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 109/265 (41%), Gaps = 46/265 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+ C G C+ CQ + +G +CE+C+ + ++ C +C
Sbjct: 1864 CQCHGHSDSCLPGS---------GICVGCQHNTEGDHCERCQAGFVSSRPEDPTAPCISC 1914
Query: 58 NCN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNP 108
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1915 PCPLAVPSNNFAEGCILRGGHTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSG 1974
Query: 109 AGSVKNT-PNCDSVKGQCESAQLSSRG--RVHTELRVQS-RKNFDPAGNRIWDLRRCKR- 163
G +CD + G C RG R T R +S F GN + C R
Sbjct: 1975 NGDPNLLFSDCDPLTGAC-------RGCLRHTTGPRCESCAPGF--YGNALLP-GNCTRC 2024
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSV 221
D P G C+ GRC CKPGV G +CD C H+ F GC C C PA
Sbjct: 2025 DCAPCG-----TEACDPHTGRCLCKPGVAGLRCDHCQDGHFGFDSCEGCHPCTCGPAA-- 2077
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCR 246
P C GQC C+ G QCR
Sbjct: 2078 -EGPECHPQSGQCRCRPGTGGPQCR 2101
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 80/210 (38%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1972 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCESCAPGFYGNALLPGNCTRCDC 2026
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNC 118
P G+ ++ GRC CKPGV G +CD C H+ F GC C C PA P C
Sbjct: 2027 APCGTEACDPHT-GRCLCKPGVAGLRCDHCQDGHFGFDSCEGCHPCTCGPAA---EGPEC 2082
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC R R G R C + L G QC
Sbjct: 2083 HPQSGQC-------RCR---------------PGTGGPQCRECAPGYWGLPEQGCRRCQC 2120
Query: 179 N------SEGRCQCKPGVTGDKCDRCDVNH 202
G C C PG++G++CD C H
Sbjct: 2121 PGGRCDPHTGHCTCPPGLSGERCDTCSQQH 2150
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+P V G +CD C Y F C+ C+C+ AG+ T CD V GQC CK+NV+
Sbjct: 1552 GQCRCRPNVAGRRCDICAPGFYGF--PSCQPCDCHEAGTAPGT--CDPVTGQCRCKENVQ 1607
Query: 242 GAQC 245
G +C
Sbjct: 1608 GLRC 1611
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 82/201 (40%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G +
Sbjct: 498 CDCSAAGTQGNACRKDPRVGRCVCKPNFHGAHCELCAPGFYG---PGCQPCQCSSPGVID 554
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL--- 168
+CD GQC + R F+ A RC + PL
Sbjct: 555 G--HCDPDTGQC-----------------KCRLGFEGA-----SCDRCAPGYFHFPLCQL 590
Query: 169 ---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G+L C+ G C C+P G CD C ++ + + C +C C+P G++ P
Sbjct: 591 CGCSPVGTLARGCDESGHCPCRPEFAGPHCDHCHPGYHGYPD--CHACSCDPRGALD--P 646
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C S G C C+ GA C+
Sbjct: 647 LC-SAGGLCHCRPGYAGATCQ 666
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+PG G +C C ++ E GC+ C+C P G CD G C C +
Sbjct: 2087 GQCRCRPGTGGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGHCTCPPGLS 2139
Query: 242 GAQC 245
G +C
Sbjct: 2140 GERC 2143
>gi|189525349|ref|XP_688995.3| PREDICTED: netrin-4-like [Danio rerio]
Length = 642
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 91/228 (39%), Gaps = 36/228 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+G S C F + ++ TG GG C CQ + G C++CR Y++
Sbjct: 341 CECHGHSESCHFSQRVWLSTGGISGGVCDHCQHNTAGRRCQRCRPGYHRHPARPLNSPHA 400
Query: 54 CTACNCNPIGSLNLQCNSE--------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
CT C C+P GS+ + E G+C CKPGV G C C H+ FGE GCK C
Sbjct: 401 CTRCWCDPAGSVLVHSADEMPWCHPRSGQCHCKPGVGGTTCSHCLPGHWGFGEEGCKPCV 460
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C CD + G C L S+G V R P G +I +L K
Sbjct: 461 C--------PLTCDPITGHC----LDSKGSV--------RLYNVPIGGKIPELSHFKPQE 500
Query: 166 YPLGHGGSLNLQ-CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 212
L + G+C CK D C + H +A S
Sbjct: 501 DERAWPKELAVSALYFTGKCSCKEKKLKSAADLCKMKHAYVIKASVLS 548
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
G+C CKPGV G C C H+ FGE GCK C C CD + G C
Sbjct: 428 GQCHCKPGVGGTTCSHCLPGHWGFGEEGCKPCVC--------PLTCDPITGHC 472
>gi|119622035|gb|EAX01630.1| laminin, alpha 1, isoform CRA_c [Homo sapiens]
Length = 2506
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 104/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GS + C+ E G C CK
Sbjct: 708 GECLKCLGNTDGAHCERCADGFY---GDAVTAKNCRACECHVKGSHSAVCHLETGLCDCK 764
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC+ C C+ AGSV + C +GQC
Sbjct: 765 PNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--GCTD-EGQCHCVP-------- 813
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC Y G C+ E G C C P
Sbjct: 814 -----------GVAGKRC---DRCAHGFYAYQDGSCTPCDCPHTQNTCDPETGECVCPPH 859
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ + E GC++C C+ GS + CD V G C+CK G C
Sbjct: 860 TQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHH--RCDVVTGHCQCKSKFGGRAC 914
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG+KCDRC + + D+ C SC CNP GS + P G C CK+NVE
Sbjct: 310 GQCPCKEGYTGEKCDRCQLGYKDY--PTCVSCGCNPVGSASDEP----CTGPCVCKENVE 363
Query: 242 GAQC 245
G C
Sbjct: 364 GKAC 367
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C G CE+C D ++ + C ACNC+ +GS + +C+ G CQCK
Sbjct: 852 GECV-CPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGHCQCKSKFG 910
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD+C + + DF + C C+C+ G+
Sbjct: 911 GRACDQCSLGYRDFPD--CVPCDCDLRGT 937
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
G+C CK G TG+KCDRC + + D+ C SC CNP GS + P
Sbjct: 310 GQCPCKEGYTGEKCDRCQLGYKDY--PTCVSCGCNPVGSASDEP 351
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 40 KCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYD 95
+C +YY Q G + C C+CNP GS++ C+ + G+C C+ G +G +CD C+ H
Sbjct: 1231 RCSSSYYGNPQTPGGS-CQKCDCNPHGSVHGDCDRTSGQCVCRLGASGLRCDECEPRHI- 1288
Query: 96 FGEAGCKSCECNPAGSVKN 114
E C SC+ G + N
Sbjct: 1289 LMETDCVSCDDECVGVLLN 1307
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQC 234
G CQCK G CD+C + + DF + C C+C+ G+ + N C G C
Sbjct: 901 GHCQCKSKFGGRACDQCSLGYRDFPD--CVPCDCDLRGTSGDACNLEQGLCGCVEETGAC 958
Query: 235 ECKDNVEGAQC 245
CK+NV G QC
Sbjct: 959 PCKENVFGPQC 969
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNSEGRCQCKPGVTGDKCD 87
C+ G C++C+ Y C +C CNP+GS + + C G C CK V G CD
Sbjct: 314 CKEGYTGEKCDRCQLGYKDYPT---CVSCGCNPVGSASDEPCT--GPCVCKENVEGKACD 368
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
RC Y+ E GC C C
Sbjct: 369 RCKPGFYNLKEKNPRGCSECFC 390
>gi|355747929|gb|EHH52426.1| hypothetical protein EGM_12864 [Macaca fascicularis]
Length = 1762
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD +Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNPLGSLPLL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 536
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CPCNGFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G T +C C Y A C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTSTQCGECSTGFYGNPRISGAPCQPCPCN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTQG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 1028
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
P+ GG L G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1029 VSPVECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS- 1087
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD + GQC CK G +C
Sbjct: 1088 -QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 90/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G ++C G
Sbjct: 989 GECLRCLHNTQGANCQLCKPGHYGSALNQTCRRCSCHASGVSPVECPPGGGACLCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -RCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCRCREGVSGQRC 1158
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 106/277 (38%), Gaps = 87/277 (31%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C ++++ G G C+ C+ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECRPMQKVRGDVFSPPGTVHGQCV-CEHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS-----LNLQCNSEGRC-----QCKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S + + S G C+ G CDRC Y
Sbjct: 323 ELQDNACRSCSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S + DPA
Sbjct: 383 LKTISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 415
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY
Sbjct: 416 LGSV-------------------------AGQCLCKENVEGAKCDQCKPNHYGLSATDPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C+CNP GS+ CD GQC C V GA C
Sbjct: 451 GCQPCDCNPLGSLPLL-TCDVDTGQCLCLSYVTGAHC 486
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 23 GGHCL--------DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EG 73
GG CL C + G C++C D Y+ C +C+C+P S + C+ G
Sbjct: 1038 GGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTSQSSHCDQLTG 1097
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+C CK G G +C C N+Y C C+CN AG+ K P CD G C
Sbjct: 1098 QCPCKLGYGGKRCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMC 1147
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 37/191 (19%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C V+G +CDRC + FG C+SC CN + CD G C + +
Sbjct: 834 GQCPCHGEVSGRRCDRCLAGY--FGFPSCRSCPCNGFAEL-----CDPETGSCFNCGGFT 886
Query: 133 RGR-----VHTELRVQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GR + S DP+ N+ + H NL +
Sbjct: 887 TGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQYF------------AHSCYQNLW-S 933
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-E 235
S+ C C G T +C C Y A C+ C CN V + +C V G+C
Sbjct: 934 SDVICNCLQGYTSTQCGECSTGFYGNPRISGAPCQPCPCNNNIDVTDPESCSRVTGECLR 993
Query: 236 CKDNVEGAQCR 246
C N +GA C+
Sbjct: 994 CLHNTQGANCQ 1004
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCK V G CDRC Y
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKSLVVGRCCDRCSPGSYGL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCHCHPQGSKDTV--CDLVTGQC 836
>gi|301780748|ref|XP_002925791.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5-like
[Ailuropoda melanoleuca]
Length = 3514
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ + DGP+C++CR ++ G C AC C+P G+L+ C + G C C+PG TG C
Sbjct: 541 CRPEFDGPHCDRCRPGHH---GYPNCRACTCDPRGTLDQLCGAGGTCHCRPGYTGAACQE 597
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR----VQS 144
C + F + C C C+ GS+ + CD GQC S R RV T LR V
Sbjct: 598 CSPGFHGFPD--CAPCHCSTEGSLHAS--CDPRSGQC-----SCRPRV-TGLRCDTCVPG 647
Query: 145 RKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
NF C+ + +P G + + ++ C C+ V G CD C +
Sbjct: 648 AYNFP----------SCEAGSCHPAGLAPADHSLPEAQAPCTCRAHVEGPSCDHCKPGFW 697
Query: 204 DFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ GC C C+P G++ C GQC CK +V G C
Sbjct: 698 GLSPSNPEGCTRCSCDPRGTLGGLTECQPGDGQCSCKPHVCGQTC 742
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 102/259 (39%), Gaps = 61/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G ++ CF+D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 294 CNCHGHAHDCFYDPEVDRRNASRNQDNVFQGGGVCIDCQHHTTGINCERCLPGFYRAPDH 353
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+C + GRC C+P TG++CD C G AG C
Sbjct: 354 PLDSPHACRRCSCE--SDFTDXXDLTGRCFCRPNFTGERCDACAE-----GFAGFPRCYP 406
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P+ S T GQ + S+ G GN C++D
Sbjct: 407 VPSFSPNGTGEQVLPAGQIVNCDCSAAGT---------------QGN------ACRKDP- 444
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
GRC CKPG G C+ C Y GC+ C+C+ G +
Sbjct: 445 -------------RLGRCVCKPGFQGTHCELCAPGFYG---PGCQPCQCSSPGVADG--D 486
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC C++ EGA C
Sbjct: 487 CDRDSGQCTCREGFEGATC 505
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 51/211 (24%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G+ C G +C C+ V G C RC ++ F C+ CEC
Sbjct: 1354 NNGARPCGCHEMGATGPTCEPFGGQCPCRAHVIGRDCSRCATGYWGF--PSCRPCECR-- 1409
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--- 166
G + CD + GQC V + P D C+ T+
Sbjct: 1410 GRL-----CDELTGQC----------------VCPPRTVPP------DCVVCQPQTFGCH 1442
Query: 167 PL-----------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
PL G + C+ + G+C+C+P VTG +CD C + F C+ C+
Sbjct: 1443 PLVGCEECDCSGPGVQELADPTCDVDSGQCKCRPNVTGRRCDACAPGFHGF--PSCRPCD 1500
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ AGSV + CD + GQC CK+NV+G +C
Sbjct: 1501 CHEAGSVPSL--CDPLTGQCHCKENVQGPRC 1529
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 82/199 (41%), Gaps = 39/199 (19%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKPG G C+ C Y GC+ C+C+ G
Sbjct: 428 CDCSAAGTQGNACRKDPRLGRCVCKPGFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 484
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----- 168
+CD GQC R+ F+ A D +PL
Sbjct: 485 G--DCDRDSGQCTC-----------------REGFEGA---TCDHCAPGYFHFPLCQLCG 522
Query: 169 -GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G+L C+ GRC C+P G CDRC H+ G C++C C+P G++ C
Sbjct: 523 CSPAGTLPEGCDEAGRCSCRPEFDGPHCDRCRPGHH--GYPNCRACTCDPRGTLDQL--C 578
Query: 228 DSVKGQCECKDNVEGAQCR 246
+ G C C+ GA C+
Sbjct: 579 GA-GGTCHCRPGYTGAACQ 596
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
H GHC+ C+ GP C++CR+ Y+ C C C P +C+ + G+C C+PG
Sbjct: 1888 HSGHCV-CKAGVTGPRCDRCREGYFGFQDCGGCRPCACGPAAE-GSECHPQSGQCHCRPG 1945
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECN 107
G +C C ++ E GC+ C+C
Sbjct: 1946 AGGAQCRECAPGYWGLPEQGCRRCQCQ 1972
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C CK GVTG +CDRC ++ F + GC+ C C PA C GQC C+
Sbjct: 1890 GHCVCKAGVTGPRCDRCREGYFGFQDCGGCRPCACGPAAEGSE---CHPQSGQCHCRPGA 1946
Query: 241 EGAQCR 246
GAQCR
Sbjct: 1947 GGAQCR 1952
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 83/255 (32%), Gaps = 88/255 (34%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--------- 51
C C+G S+RC G C+ CQ + +G +CE CR + + +
Sbjct: 1782 CQCHGHSDRCLPGS---------GVCVGCQHNTEGDHCEHCRAGFVRSGSEDPMAPCVSC 1832
Query: 52 ---------NFC---------TACNCNPIGSLNLQCN-------------------SEGR 74
NF T C C P G C G
Sbjct: 1833 PCPLAVPSNNFAVGCVLRGGRTQCLCKP-GYAGASCERTPCAGCDCSTCGTETCDPHSGH 1891
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C CK GVTG +CDRC ++ F + GC+ C C PA C GQC
Sbjct: 1892 CVCKAGVTGPRCDRCREGYFGFQDCGGCRPCACGPAAEGSE---CHPQSGQCHCR----- 1943
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN------SEGRCQCK 187
G R C + L G QC GRC C
Sbjct: 1944 -----------------PGAGGAQCRECAPGYWGLPEQGCRRCQCQGGHCDVHTGRCTCP 1986
Query: 188 PGVTGDKCDRCDVNH 202
PG++G++CD C H
Sbjct: 1987 PGLSGERCDTCSQQH 2001
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C+C +CD G+C C +
Sbjct: 1938 GQCHCRPGAGGAQCRECAPGYWGLPEQGCRRCQCQGG-------HCDVHTGRCTCPPGLS 1990
Query: 242 GAQC 245
G +C
Sbjct: 1991 GERC 1994
>gi|357607280|gb|EHJ65435.1| hypothetical protein KGM_05418 [Danaus plexippus]
Length = 1648
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 113/268 (42%), Gaps = 85/268 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CN + C FD +YN+TG GG C +CQ + G NCE+C YY+ +
Sbjct: 208 CTCNNHATTCHFDAAVYNKTGKISGGVCDNCQHNTMGVNCERCMPTYYKDPRLDIQSPDV 267
Query: 54 CTACNCNPIGSLN--LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA--- 99
C C+C+P G+ + + C+ E GRC CK V G +CDRC +++F
Sbjct: 268 CQPCDCDPEGTTDKEVLCDDETDVANNKTAGRCLCKANVDGLRCDRCKDGYWNFDAQNPD 327
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
GC++C CDS+ ++ RG DPA
Sbjct: 328 GCEAC------------TCDSL------GTINERG-------------CDPAT------- 349
Query: 160 RCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNP 217
G C CK VTG CD+C Y ++ GC C+C+
Sbjct: 350 ----------------------GVCFCKRHVTGRNCDQCLPEFYGLSDSDDGCSPCDCDL 387
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS+ +CD + GQC+C+ NV G +C
Sbjct: 388 GGSIDR--DCDVITGQCKCRPNVTGRRC 413
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 98/203 (48%), Gaps = 25/203 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---SEGRCQCK 78
+ G CL C + G +CE C + YY + + C CNC+ +G+ Q N G+C C
Sbjct: 869 YTGKCLKCLHNTAGEHCEVCEEGYYGNALEKACYKCNCSVLGTNFTQSNCDGITGQCPCF 928
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G CD+C NH+ GC CEC+P GS+ +P C+ G+C+ + GR
Sbjct: 929 NNVMGINCDQCTENHWRIALGTGCDPCECDPVGSI--SPQCNPYIGKCD-CKPGHGGRQC 985
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
Q ++N G+ + C D Y GS++ QC+ E G C CKPG+ G KCD
Sbjct: 986 D----QCQENH--WGDPNIECYECDCDIY-----GSVSQQCSRENGSCICKPGIGGYKCD 1034
Query: 197 RCDVNHYDFGEAGCKSCECNPAG 219
C + GEA ECN G
Sbjct: 1035 MCARGY--LGEAP----ECNACG 1051
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 96/237 (40%), Gaps = 45/237 (18%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---SEGRC-QCKPGVTG 83
DC+ G C+ C DNYY C C CN + N G+C +C G
Sbjct: 823 DCKEGYAGLLCDVCADNYYGDPMKGTCEKCECNDNTDITKPGNCDPYTGKCLKCLHNTAG 882
Query: 84 DKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+ C+ C+ +Y + E C C C+ G+ NCD + GQC
Sbjct: 883 EHCEVCEEGYYGNALEKACYKCNCSVLGTNFTQSNCDGITGQC----------------- 925
Query: 143 QSRKNFDPAGNRIWDLR--RCKRDTYPLGHG-----------GSLNLQCNSE-GRCQCKP 188
P N + + +C + + + G GS++ QCN G+C CKP
Sbjct: 926 -------PCFNNVMGINCDQCTENHWRIALGTGCDPCECDPVGSISPQCNPYIGKCDCKP 978
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G G +CD+C NH+ C C+C+ GSV + C G C CK + G +C
Sbjct: 979 GHGGRQCDQCQENHWGDPNIECYECDCDIYGSV--SQQCSRENGSCICKPGIGGYKC 1033
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP 79
G G C C + G NC++C +N+++ + C C C+P+GS++ QCN G+C CKP
Sbjct: 920 GITGQC-PCFNNVMGINCDQCTENHWRIALGTGCDPCECDPVGSISPQCNPYIGKCDCKP 978
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
G G +CD+C NH+ C C+C+ GSV
Sbjct: 979 GHGGRQCDQCQENHWGDPNIECYECDCDIYGSV 1011
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
+Y ++G C C+P GS + QCN G CQC + G +CDRC Y F + GCK
Sbjct: 640 FYIRNGSE---PCQCDPSGSKSHQCNPFTGNCQCVENIVGVRCDRCAPGTYGFSKFGCKR 696
Query: 104 CECNPAGSVKNTPNCDSVKGQCE 126
C+CN GS+ N CD+ GQC+
Sbjct: 697 CDCNSIGSLDNF--CDAASGQCK 717
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 26/134 (19%)
Query: 29 CQGDRDGPNCEKCRDNYYQKS-GDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
C+ G NC++C +Y S D+ C+ C+C+ GS++ C+ G+C+C+P VTG +C
Sbjct: 354 CKRHVTGRNCDQCLPEFYGLSDSDDGCSPCDCDLGGSIDRDCDVITGQCKCRPNVTGRRC 413
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR---GRVHTEL-RV 142
D+ N++ G++ DS+ + ES+Q +S+ + ++L V
Sbjct: 414 DQPLQNYF--------------VGAL------DSIVYEAESSQCNSQIDDNAIQSQLCHV 453
Query: 143 QSRKNFDPAGNRIW 156
R+N+ W
Sbjct: 454 VIRENYPDGRKETW 467
>gi|354489048|ref|XP_003506676.1| PREDICTED: laminin subunit alpha-3 [Cricetulus griseus]
Length = 3192
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 121/271 (44%), Gaps = 42/271 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D ++ + GG C++CQ + G NCEKC YY+ G
Sbjct: 268 CNCHGHAVDCYYDPDVEQQQASLNSKGTYSGGGVCINCQHNTAGVNCEKCAKGYYRPYGV 327
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + + S G C CKP GD C+ C +Y+F C
Sbjct: 328 PVDALHGCVPCSCDPERADDCEQGS-GHCHCKPNFHGDNCETCADGYYNF-----PFCLR 381
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-----RVQSRKNFDPAGNRIWDLRRC 161
PA SV D V G + + G V E+ R R + G R D R
Sbjct: 382 IPASSVYTLSPEDPVAGNLKGCDCNLEG-VLPEICDDHGRCLCRPGVE--GPRC-DSCRL 437
Query: 162 KRDTYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
++P+ GS + C+ G+C+C PG+TG +CDRC YDF S
Sbjct: 438 GSYSFPICQACQCSAIGSYPVPCDPVTGQCECLPGITGKQCDRCLSGAYDFPYCQGASSV 497
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PAG+V DS G C+CK +V C
Sbjct: 498 CDPAGTV------DSSLGYCQCKPHVASPTC 522
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 106/243 (43%), Gaps = 41/243 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------QKSGDNFCTA------------CNCNPIGSL 65
GHC C+ + G NCE C D YY + + T C+CN G L
Sbjct: 353 GHC-HCKPNFHGDNCETCADGYYNFPFCLRIPASSVYTLSPEDPVAGNLKGCDCNLEGVL 411
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
C+ GRC C+PGV G +CD C + Y F C++C+C+ GS CD V GQC
Sbjct: 412 PEICDDHGRCLCRPGVEGPRCDSCRLGSYSF--PICQACQCSAIGSYPVP--CDPVTGQC 467
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQ 185
E L + K D + +D C+ + G+++ +S G CQ
Sbjct: 468 EC------------LPGITGKQCDRCLSGAYDFPYCQGASSVCDPAGTVD---SSLGYCQ 512
Query: 186 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
CKP V C C +++ + GC C+C+ AG+V T C G C CK +V G
Sbjct: 513 CKPHVASPTCSVCKPLYWNLAKENPNGCSECQCHEAGTVSGTGECGQGDGDCSCKAHVTG 572
Query: 243 AQC 245
C
Sbjct: 573 DAC 575
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR Y C AC C+ IGS + C+ G+C+C PG+T
Sbjct: 419 GRCL-CRPGVEGPRCDSCRLGSYSFP---ICQACQCSAIGSYPVPCDPVTGQCECLPGIT 474
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG--QCESAQLSSRGRVHTEL 140
G +CDRC YDF S C+PAG+V DS G QC+ S V L
Sbjct: 475 GKQCDRCLSGAYDFPYCQGASSVCDPAGTV------DSSLGYCQCKPHVASPTCSVCKPL 528
Query: 141 RVQSRKNFDPAGNRIWDLRR----------CKRDTYPLGHGGSLNLQC-NSEGRCQCKPG 189
W+L + C G G +C +G C CK
Sbjct: 529 --------------YWNLAKENPNGCSECQCHEAGTVSGTG-----ECGQGDGDCSCKAH 569
Query: 190 VTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
VTGD CD C ++ ++ GC+ C+C+ GS+ T C G+C+C+D++ G +C+
Sbjct: 570 VTGDACDTCKDGYFALEKSNYFGCQGCQCDIGGSL--TTMCSGPSGECQCRDHIVGKECQ 627
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 91/211 (43%), Gaps = 51/211 (24%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P G+ + C+ EG +C C+P V G +C RC +Y F CK C C
Sbjct: 1176 NGALPCECHPAGAASRHCSPEGGQCPCRPNVIGRQCTRCAAGYYGFPH--CKPCNCGRRL 1233
Query: 111 SVKNTPNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-----------GNRI 155
+ T C +V+ QCE +++S NF P G
Sbjct: 1234 CEEVTGKCLCPPRTVRPQCEVCEVNSF-------------NFHPLAGCEACNCSRKGTIE 1280
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
+ C RD+ G+C+CKP +TG +CD+C + F E C C C
Sbjct: 1281 AAISECDRDS----------------GQCRCKPRITGQRCDKCAPGFHQFPE--CVPCHC 1322
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
N G + CD G C+CK+NV+G +C+
Sbjct: 1323 NRDGIGREV--CDPGTGACKCKENVKGPECQ 1351
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE C++ +Y + C C C
Sbjct: 1600 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCEHCKEGHYGNAIHGSCRVCPCP 1650
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C +G RC CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1651 HTNSFATGCTVDGGIVRCACKPGYTGAQCERCAPGYFGNPQKFG-GNCQPCNCNSNGQLG 1709
Query: 114 NTPNCDSVKGQCESAQ 129
CD + G C S +
Sbjct: 1710 ---TCDPLTGDCVSQE 1722
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 102/260 (39%), Gaps = 55/260 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN----------PIGSLNLQCN 70
+CQ G C +C Y Q+ N C ACNC+ + N
Sbjct: 232 ECQHHTCGETCNRCCAGYNQRHWRPAARGQHNECEACNCHGHAVDCYYDPDVEQQQASLN 291
Query: 71 SEGR-------CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPN 117
S+G C+ G C++C +Y +G GC C C+P + +
Sbjct: 292 SKGTYSGGGVCINCQHNTAGVNCEKCAKGYYRPYGVPVDALHGCVPCSCDP----ERADD 347
Query: 118 CDSVKGQC--------ESAQLSSRGRVHTE--LRV--QSRKNFDPAGNRIWDLRRCKRDT 165
C+ G C ++ + + G + LR+ S P +L+ C +
Sbjct: 348 CEQGSGHCHCKPNFHGDNCETCADGYYNFPFCLRIPASSVYTLSPEDPVAGNLKGCDCNL 407
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G L C+ GRC C+PGV G +CD C + Y F C++C+C+ GS
Sbjct: 408 -----EGVLPEICDDHGRCLCRPGVEGPRCDSCRLGSYSF--PICQACQCSAIGSYPVP- 459
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD V GQCEC + G QC
Sbjct: 460 -CDPVTGQCECLPGITGKQC 478
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----EGRCQCKPGVTGDKCDRCDV 91
P CE C N + C ACNC+ G++ + G+C+CKP +TG +CD+C
Sbjct: 1250 PQCEVCEVNSFNFHPLAGCEACNCSRKGTIEAAISECDRDSGQCRCKPRITGQRCDKCAP 1309
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
+ F E C C CN G + CD G C+
Sbjct: 1310 GFHQFPE--CVPCHCNRDGIGREV--CDPGTGACK 1340
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 37/190 (19%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACN--CNPIGSLNLQCNSEGRCQCKPGVTGDK 85
+C G C++C Y +C + C+P G+++ +S G CQCKP V
Sbjct: 468 ECLPGITGKQCDRCLSGAYDFP---YCQGASSVCDPAGTVD---SSLGYCQCKPHVASPT 521
Query: 86 CDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLS-------SRG 134
C C +++ + GC C+C+ AG+V T C G C A ++ G
Sbjct: 522 CSVCKPLYWNLAKENPNGCSECQCHEAGTVSGTGECGQGDGDCSCKAHVTGDACDTCKDG 581
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
E + N+ + + C+ D GGSL C+ G CQC+ + G
Sbjct: 582 YFALE-----KSNY-------FGCQGCQCDI-----GGSLTTMCSGPSGECQCRDHIVGK 624
Query: 194 KCDRCDVNHY 203
+C R + ++Y
Sbjct: 625 ECQRPEDSYY 634
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 167 PLGHGGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAG 219
P H S C +G RC CKPG TG +C+RC ++ FG C+ C CN G
Sbjct: 1648 PCPHTNSFATGCTVDGGIVRCACKPGYTGAQCERCAPGYFGNPQKFG-GNCQPCNCNSNG 1706
Query: 220 SVKNTPNCDSVKGQCECKDNVEGA 243
+ CD + G C ++ +G+
Sbjct: 1707 QLG---TCDPLTGDCVSQEPRDGS 1727
>gi|355560912|gb|EHH17598.1| hypothetical protein EGK_14037 [Macaca mulatta]
Length = 1762
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD +Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNPLGSLPLL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 536
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CPCNGFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCPCN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C ++ G ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTPG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 1028
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
P+ GG L G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1029 VSPVECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS- 1087
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD + GQC CK G +C
Sbjct: 1088 -QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 94/249 (37%), Gaps = 82/249 (32%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSG--------DNFCTACNCNPIGS-----LNLQCN 70
G C+ CQ + DGPNCE+C+D ++Q + DN C +C+CN S + +
Sbjct: 293 GQCV-CQHNTDGPNCERCKD-FFQDAPWRPAAELQDNACRSCSCNSHSSRCHFDMTMYLA 350
Query: 71 SEGRC-----QCKPGVTGDKCDRCDVNHY------DFGEAGCKSCECNPAGSVKNTPNCD 119
S G C+ G CDRC Y C CEC+P G++
Sbjct: 351 SGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYACIPCECDPDGTISG----- 405
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
G C S + DPA +
Sbjct: 406 ---GICVS-------------------HSDPALGSV------------------------ 419
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C CK V G KCD+C NHY GC+ C+CNP GS+ CD GQC C
Sbjct: 420 -AGQCLCKENVEGAKCDQCKPNHYGLSATDPLGCQPCDCNPLGSLPLL-TCDVDTGQCLC 477
Query: 237 KDNVEGAQC 245
V GA C
Sbjct: 478 LSYVTGAHC 486
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 90/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G ++C G
Sbjct: 989 GECLRCLHNTPGANCQLCKPGHYGSALNQTCRRCSCHASGVSPVECPPGGGACLCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -RCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCRCREGVSGQRC 1158
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 73/191 (38%), Gaps = 37/191 (19%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C V+G +CDRC + FG C+SC CN + CD G C + +
Sbjct: 834 GQCPCHGEVSGRRCDRCLAGY--FGFPSCRSCPCNGFAEL-----CDPETGSCFNCGGFT 886
Query: 133 RGR-----VHTELRVQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GR + S DP+ N+ + H NL +
Sbjct: 887 TGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQYF------------AHSCYQNLW-S 933
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-E 235
S+ C C G TG +C C Y A C+ C CN V + +C V G+C
Sbjct: 934 SDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCPCNNNIDVTDPESCSRVTGECLR 993
Query: 236 CKDNVEGAQCR 246
C N GA C+
Sbjct: 994 CLHNTPGANCQ 1004
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCK V G CDRC Y
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKSLVVGRCCDRCSPGSYGL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCHCHPQGSKDTV--CDLVTGQC 836
>gi|328793738|ref|XP_396118.4| PREDICTED: laminin subunit alpha, partial [Apis mellifera]
Length = 3544
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 103/238 (43%), Gaps = 48/238 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C++C YY C ACNC+ GS+ C++E +CQC+ G +C++
Sbjct: 482 CLANFAGRTCDQCSPGYYMYPE---CIACNCDSHGSIGASCDAEAKCQCRENFDGTRCNQ 538
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQS 144
C Y+F C+ C C+PAG V+ C S+ QC+ GR+ E +
Sbjct: 539 CKEGFYNF--PTCEGCNCDPAGIVETFQGCGSLPAGELCQCKD---RVEGRICNECK--- 590
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------------SEGRCQCKPGVT 191
W+L+ P G QCN G+C CKPGVT
Sbjct: 591 --------PLYWNLQ-------PYNPQGCEECQCNIPGVIGNIGECDTKSGQCICKPGVT 635
Query: 192 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C++C Y+ E GC C C+ GSV P CD GQC+C+ V G C+
Sbjct: 636 DRSCNQCVDGTYNLQENNFFGCTDCACDIGGSVN--PICDKQTGQCQCQPRVTGLTCK 691
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
+ G C C+ + G C++C DNYY + C AC+C I S + QCN G+C CKPG
Sbjct: 1842 YTGQCF-CRENVIGEQCDRCADNYYDYDSCDGCKACDCG-IASESSQCNDMTGQCLCKPG 1899
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C ++++G GC SCECN SV + C++ GQC
Sbjct: 1900 VTGRRCDQCISGYWNYGSDGCTSCECNIGYSVGVS--CNTTTGQC 1942
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 115/262 (43%), Gaps = 41/262 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG ++ C + G CLDC+ G +CE C YY + C C
Sbjct: 1668 CECNGHADTC---------DVNTGICLDCKDGTMGDHCEFCEQGYYGNATGGTPTDCLIC 1718
Query: 58 NCN-PIGSLNL----QCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCE 105
C P+ S N Q N EG C C PG G +C+ C +Y +GE CK CE
Sbjct: 1719 ACPLPVPSNNFATGCQVNEEGNKISCDCLPGYYGARCESCASGYYGNPETYGEY-CKPCE 1777
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ +CDS G+C ++ G + + F A R D R C
Sbjct: 1778 CSGNIDTNQIGSCDSRTGECLRCLNNTYGEA---CNLCAPGFFGDAIER-KDCRNCLCKE 1833
Query: 166 YPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
+ H C+S G+C C+ V G++CDRC N+YD+ GCK+C+C G
Sbjct: 1834 CGMEH-------CDSYTGQCFCRENVIGEQCDRCADNYYDYDSCDGCKACDC---GIASE 1883
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ C+ + GQC CK V G +C
Sbjct: 1884 SSQCNDMTGQCLCKPGVTGRRC 1905
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 103/238 (43%), Gaps = 47/238 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ GP C++C YY G C CNC+ IGS ++ C++ G+C C G
Sbjct: 433 GTCL-CKKGYGGPRCDQCISGYY---GYPNCRPCNCSSIGSSSISCDAIGKCSCLANFAG 488
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
CD+C +Y + E C +C C+ GS+ + CD+ E + Q
Sbjct: 489 RTCDQCSPGYYMYPE--CIACNCDSHGSIGAS--CDA------------------EAKCQ 526
Query: 144 SRKNFDPAGNRIWDLRRCKRDTY-----------PLGHGGSLN--LQCNSEGRCQCKPGV 190
R+NFD G R +CK Y P G + + CQCK V
Sbjct: 527 CRENFD--GTR---CNQCKEGFYNFPTCEGCNCDPAGIVETFQGCGSLPAGELCQCKDRV 581
Query: 191 TGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C +++ + GC+ C+CN G + N CD+ GQC CK V C
Sbjct: 582 EGRICNECKPLYWNLQPYNPQGCEECQCNIPGVIGNIGECDTKSGQCICKPGVTDRSC 639
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 177 QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
QCN G+C CKPGVTG +CD+C ++++G GC SCECN SV + C++ GQC
Sbjct: 1886 QCNDMTGQCLCKPGVTGRRCDQCISGYWNYGSDGCTSCECNIGYSVGVS--CNTTTGQCS 1943
Query: 236 CKDNVEGAQC 245
C V G +C
Sbjct: 1944 CLPGVIGEKC 1953
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 84/225 (37%), Gaps = 71/225 (31%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
GG CL C+ + G CE C+ +Y G C CNC S L G C C P V
Sbjct: 1257 FGGQCL-CKPNIIGRRCEICKMGFY---GFPNCEPCNC---PSTALCEPKTGACICPPRV 1309
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
TG +CD+C++ Y F GC+ C C+P G + CD G C
Sbjct: 1310 TGKRCDQCEIGTYGFHPILGCEECNCSPLGVIDGDLQCDFFNGSC--------------- 1354
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
RCK + V G +CD+C
Sbjct: 1355 -------------------RCKEN-------------------------VVGRQCDKCRP 1370
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ F C+ C+C+ G+ + CD +C CK+NV+G C
Sbjct: 1371 GYSQFPH--CEKCDCDIRGTTEEI--CDQYTAECYCKENVQGLAC 1411
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 114/263 (43%), Gaps = 43/263 (16%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC G S+ C +D E +++ GG C +C+ + +G NC +C+ +Y+
Sbjct: 209 CNCFGHSDECEYDPEVDEKHLSLDIHDNYEGGGVCKNCRDNTEGINCNRCKSTFYRPDDK 268
Query: 49 --SGDNFCTACNCNPIGSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
+ + C C CN + NL N G+C+C+ T CD C HY G C
Sbjct: 269 PLNATDVCQPCQCN---APNLTGNCADITGKCECRKEYTSPNCDSCSFGHY--GYPNCVP 323
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+C G+ + +C+++ G C +L+ G L Q F + C+
Sbjct: 324 CQCFSNGT--DGDHCEAIDGSC-PCKLNYAGH-FCNLCAQGYYKFP-------ECLPCEC 372
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ PL GS N +C+ G C CK G CD C+ +Y++ C C C+ G+
Sbjct: 373 N--PL---GSHNAECDVISGNCICKNNYGGRTCDICEDGYYNY--PLCTFCNCDSRGTEA 425
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
CD G C CK G +C
Sbjct: 426 EI--CDKSNGTCLCKKGYGGPRC 446
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL-----QCNSEGRCQCKPGV 81
C+ + DG C +C++ +Y NF C CNC+P G + + CQCK V
Sbjct: 527 CRENFDGTRCNQCKEGFY-----NFPTCEGCNCDPAGIVETFQGCGSLPAGELCQCKDRV 581
Query: 82 TGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G C+ C +++ + GC+ C+CN G + N CD+ GQC + G
Sbjct: 582 EGRICNECKPLYWNLQPYNPQGCEECQCNIPGVIGNIGECDTKSGQC----ICKPGVTDR 637
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
++ N + C D GGS+N C+ + G+CQC+P VTG C
Sbjct: 638 SCNQCVDGTYNLQENNFFGCTDCACDI-----GGSVNPICDKQTGQCQCQPRVTGLTCKE 692
Query: 198 CDVNHY 203
HY
Sbjct: 693 PLKAHY 698
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 88/198 (44%), Gaps = 27/198 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C ++ GD C C C G C+S G+C C+
Sbjct: 1795 GECLRCLNNTYGEACNLCAPGFF---GDAIERKDCRNCLCKECGME--HCDSYTGQCFCR 1849
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G++CDRC N+YD+ GCK+C+C G + C+ + GQC L G
Sbjct: 1850 ENVIGEQCDRCADNYYDYDSCDGCKACDC---GIASESSQCNDMTGQC----LCKPG--- 1899
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
V R+ D + W+ + G S+ + CN+ G+C C PGV G+KCD
Sbjct: 1900 ----VTGRR-CDQCISGYWNYGSDGCTSCECNIGYSVGVSCNTTTGQCSCLPGVIGEKCD 1954
Query: 197 RCDVNHYDFGEAGCKSCE 214
C + GC +C+
Sbjct: 1955 HCPYRNVLIPGQGCFACD 1972
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 75/191 (39%), Gaps = 20/191 (10%)
Query: 67 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF--GEAG--CKSCECNPAGSVKNTPNCDSVK 122
L +S +CQC P G C+ C + +Y G G C CECN + CD
Sbjct: 1627 LPASSVEQCQCPPNYQGLSCEECALGYYRVQSGPHGGYCVRCECN-----GHADTCDVNT 1681
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG 182
G C + + G H E Q + G D C + + Q N EG
Sbjct: 1682 GICLDCKDGTMGD-HCEFCEQGYYG-NATGGTPTDCLICACPLPVPSNNFATGCQVNEEG 1739
Query: 183 ---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC- 234
C C PG G +C+ C +Y +GE CK CEC+ +CDS G+C
Sbjct: 1740 NKISCDCLPGYYGARCESCASGYYGNPETYGEY-CKPCECSGNIDTNQIGSCDSRTGECL 1798
Query: 235 ECKDNVEGAQC 245
C +N G C
Sbjct: 1799 RCLNNTYGEAC 1809
>gi|348557362|ref|XP_003464488.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-1-like [Cavia
porcellus]
Length = 3022
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 106/237 (44%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ G +CE+C D +Y GD C AC C+ GSL+ C+ E GRC C+
Sbjct: 885 GQCLKCVGNTGGAHCERCADGFY---GDAVTAKNCRACGCHEKGSLSGVCHPESGRCDCR 941
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y A GC +C C+ GS +C + GQC
Sbjct: 942 PHVTGQRCDQCLPGYYGLDTAPGCLACNCSATGSTSG--DCTDL-GQC------------ 986
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
+ R D RC + GG C+ E G C C P
Sbjct: 987 --------RCLPGVTGRRCD--RCAHGFFSFREGGCTACDCAHTQNSCDPESGECICPPH 1036
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
TG KC+ C+ H+ + E GC++C C+ GS + C+ + GQC CK G C
Sbjct: 1037 TTGPKCEDCEAGHWGWDAEQGCQACSCSSKGSTGS--QCNLLSGQCPCKAEFGGQLC 1091
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 103/233 (44%), Gaps = 40/233 (17%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C YY C ACNC+ GS + C G+C+C PGVTG +CD
Sbjct: 939 DCRPHVTGQRCDQCLPGYYGLDTAPGCLACNCSATGSTSGDCTDLGQCRCLPGVTGRRCD 998
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC + F E GC +C+C +N+ CD G+C HT K
Sbjct: 999 RCAHGFFSFREGGCTACDC---AHTQNS--CDPESGECICPP-------HT----TGPKC 1042
Query: 148 FD-PAGNRIWDLRR------CKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCD 199
D AG+ WD + C GS QCN G+C CK G CD+C
Sbjct: 1043 EDCEAGHWGWDAEQGCQACSCSSK-------GSTGSQCNLLSGQCPCKAEFGGQLCDQCS 1095
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCD-------SVKGQCECKDNVEGAQC 245
+ + DF + C C C+ G++ T + D G C CK+NV G QC
Sbjct: 1096 LGYRDFPD--CVPCACDLRGTLATTCDLDLGVCSCAEDTGACSCKENVVGLQC 1146
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+ ++ C++D+ + + +G GG C+ CQ + G NCE C +Y+
Sbjct: 344 CNCHNKASDCYYDENIAKQKKSLDTSGQFQGGGVCIGCQQNTAGVNCETCVPGFYRPHRV 403
Query: 50 ---GDNFCTACNCNPIGSL-------NLQCNSE-----GRCQCKPGVTGDKCDRCDVNHY 94
D C C+C+P+GSL +LQ N G+C CK G G++CDRC +
Sbjct: 404 SPYEDEPCRPCDCDPVGSLSSDCVKDDLQSNLHHGVWPGQCPCKEGYGGERCDRCQFGYK 463
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
F C C+C+PAGSV + P
Sbjct: 464 GF--PSCVRCDCSPAGSVNDDP 483
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-SGDNF-CTACN 58
C CN S C D E G CL+C+ + G +CE C YY+K +G C+ C
Sbjct: 1420 CTCNNHSAAC--DPET-------GKCLNCRDNTAGDHCELCTPGYYRKVTGTTLHCSPCA 1470
Query: 59 C--NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNP 108
C +P S + C SE RC C G G C+RC V +Y + G G C+ C C+P
Sbjct: 1471 CPHSPPASFSPTCVSEVDGGFRCSACAVGYEGRYCERCSVGYYGNPGMLGGSCQKCICSP 1530
Query: 109 AGSVKNTPNCDSVKGQC 125
GSV + NCD + GQC
Sbjct: 1531 QGSVHS--NCDPLSGQC 1545
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 99/238 (41%), Gaps = 28/238 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC---NPIGSLNLQCNSEGRC-- 75
G C C + G +CE+C +Y + C C C P + + C+ +
Sbjct: 772 GICSGCTHNTTGDHCEQCLPGFYGMPSRGTPRDCQPCACPLATPSNNFSPTCHLDEEEDV 831
Query: 76 ---QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
QC PG G C+RC +Y C C+C+ +CDSV GQC
Sbjct: 832 VCDQCAPGYAGTWCERCADGYYGNPTVPGGSCVPCDCSGNVDPSEPGHCDSVTGQCLKC- 890
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKP 188
+ + G H E + F + R C GSL+ C+ E GRC C+P
Sbjct: 891 VGNTGGAHCE---RCADGFYGDAVTAKNCRACG-----CHEKGSLSGVCHPESGRCDCRP 942
Query: 189 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG +CD+C +Y A GC +C C+ GS +C + GQC C V G +C
Sbjct: 943 HVTGQRCDQCLPGYYGLDTAPGCLACNCSATGSTSG--DCTDL-GQCRCLPGVTGRRC 997
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G++CDRC + F C C+C+PAGSV + P + C CKDNVE
Sbjct: 442 GQCPCKEGYGGERCDRCQFGYKGF--PSCVRCDCSPAGSVNDDPCAEP----CLCKDNVE 495
Query: 242 GAQC 245
G C
Sbjct: 496 GEAC 499
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNS-EGRCQCKP 79
G C C +G CE+C YY G C C C+P GS++ C+ G+C CKP
Sbjct: 1490 GFRCSACAVGYEGRYCERCSVGYYGNPGMLGGSCQKCICSPQGSVHSNCDPLSGQCICKP 1549
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCE 105
G TG +CD C H ++ C SC+
Sbjct: 1550 GATGLQCDECQPRHL-LVDSSCVSCD 1574
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 68/196 (34%), Gaps = 59/196 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C GP CE C ++ + C AC+C+ GS QCN G+C CK
Sbjct: 1029 GECI-CPPHTTGPKCEDCEAGHWGWDAEQGCQACSCSSKGSTGSQCNLLSGQCPCKAEFG 1087
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C + + DF + C C C+ G++ T CD G C
Sbjct: 1088 GQLCDQCSLGYRDFPD--CVPCACDLRGTLATT--CDLDLGVCS---------------- 1127
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C DT G C CK V G +C C +
Sbjct: 1128 ------------------CAEDT----------------GACSCKENVVGLQCSECRTST 1153
Query: 203 YDF---GEAGCKSCEC 215
Y GC C C
Sbjct: 1154 YALRANDPRGCTPCFC 1169
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C G G C+RC V +Y + G G C+ C C+P GSV + NCD + GQC CK G
Sbjct: 1496 CAVGYEGRYCERCSVGYYGNPGMLGGSCQKCICSPQGSVHS--NCDPLSGQCICKPGATG 1553
Query: 243 AQC 245
QC
Sbjct: 1554 LQC 1556
>gi|432860251|ref|XP_004069466.1| PREDICTED: laminin subunit beta-1-like [Oryzias latipes]
Length = 1785
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 44/230 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ +G GG C +CQ + G CE+C+ +YQ N
Sbjct: 340 CNCNQHSDACHFDMAVFVASGGVSGGVCDNCQHNTAGHKCEQCKPFFYQHPERDARDPNI 399
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGC 101
C CNC+P+GS+N G+C+CK V G++CDRC HY + GC
Sbjct: 400 CQPCNCDPLGSVNGGLCDGMTDIRAGLIAGQCRCKVNVEGERCDRCRPAHYGLSDEPEGC 459
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--- 158
K+C C+P G+ CDS G C +L+ + ++ D W L
Sbjct: 460 KACTCSPLGTAPGGNPCDSQSGNCFCKRLT------------TGQDCDQCVPEHWGLSND 507
Query: 159 ----RRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+++ QC+ G+C C+ + G +CD+ + Y
Sbjct: 508 VDGCRPCDCDL-----GGAIHNQCDQMSGQCVCRDHMFGRRCDQIESGFY 552
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ ++ S A C C+P GSL+ C+ G +C+C+P V G CDRC
Sbjct: 749 PMTDICRNFIFRISALLHQGAKECQCDPQGSLSTVCDPNGGQCRCRPNVVGRSCDRCAPA 808
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GC +CECNP GS +P CD + GQC
Sbjct: 809 TFQFGPSGCIACECNPLGS--QSPFCDQLTGQC 839
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 113/267 (42%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTA 56
C+CNG + C D G CL C+ G +CE+C D YY SGD+ C
Sbjct: 866 CSCNGHAETCDPDT---------GSCLHCRDHTAGHSCERCLDGYYGDPVLGSGDH-CRP 915
Query: 57 CNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKS 103
C C P G +L+ + + C C G G +CD C Y E G C
Sbjct: 916 CMC-PDGPESLRQFAGSCFRSDDSQQAVCVCSTGYRGPRCDECSPGFYGSPSEVGGQCVP 974
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC-- 161
C CN + + +CD G+C S G + ++ N + D R+C
Sbjct: 975 CRCNNNIDMLDPESCDRQSGECLRCLYYSEGTACQDCKLGYYGN-----ALLQDCRKCVC 1029
Query: 162 -KRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPA 218
K T P S + CN S G+C C P VTG CDRC + ++ GC+SC+C+P
Sbjct: 1030 NKLGTSPSSCSSSGDCHCNRSSGQCPCLPNVTGQYCDRCAPDTWNMASGLGCQSCDCDPK 1089
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
S + C+ + GQC C G C
Sbjct: 1090 HSYGTS--CNQISGQCSCHPGFGGRTC 1114
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 88/209 (42%), Gaps = 29/209 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN +N D E +R G CL C +G C+ C+ YY + C C CN
Sbjct: 975 CRCN--NNIDMLDPESCDR--QSGECLRCLYYSEGTACQDCKLGYYGNALLQDCRKCVCN 1030
Query: 61 PIGSLNL--------QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAG 110
+G+ CN S G+C C P VTG CDRC + ++ GC+SC+C+P
Sbjct: 1031 KLGTSPSSCSSSGDCHCNRSSGQCPCLPNVTGQYCDRCAPDTWNMASGLGCQSCDCDPKH 1090
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
S + C+ + GQC S GR E + W K
Sbjct: 1091 SYGTS--CNQISGQC-SCHPGFGGRTCNECK-----------ELFWGDPEVKCYACDCDP 1136
Query: 171 GGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
G QCN + GRC C GV+G +CD C
Sbjct: 1137 RGISEQQCNKANGRCVCVEGVSGPRCDTC 1165
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 109/250 (43%), Gaps = 34/250 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS-----LNLQCNS 71
GHC+ C + G NCE+C+D Y+ + N C CNCN + + S
Sbjct: 301 GHCM-CNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKRCNCNQHSDACHFDMAVFVAS 359
Query: 72 EGRC-----QCKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDS 120
G C+ G KC++C Y E C+ C C+P GSV N CD
Sbjct: 360 GGVSGGVCDNCQHNTAGHKCEQCKPFFYQHPERDARDPNICQPCNCDPLGSV-NGGLCDG 418
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR-CKRDT-YPLGHGGSLNLQC 178
+ + ++ + R + + PA + D CK T PLG N C
Sbjct: 419 MT-DIRAGLIAGQCRCKVNVEGERCDRCRPAHYGLSDEPEGCKACTCSPLGTAPGGN-PC 476
Query: 179 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCE 235
+S+ G C CK TG CD+C H+ GC+ C+C+ G++ N CD + GQC
Sbjct: 477 DSQSGNCFCKRLTTGQDCDQCVPEHWGLSNDVDGCRPCDCDLGGAIHN--QCDQMSGQCV 534
Query: 236 CKDNVEGAQC 245
C+D++ G +C
Sbjct: 535 CRDHMFGRRC 544
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 95/233 (40%), Gaps = 20/233 (8%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G +C++C +Q G + C AC CNP+GS + C+ G+C C G
Sbjct: 788 GGQC-RCRPNVVGRSCDRCAPATFQ-FGPSGCIACECNPLGSQSPFCDQLTGQCGCVVGA 845
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CDRC H+ F C+ C CN + CD G C + + G H+ R
Sbjct: 846 YGRQCDRCLPGHWGF--PACRPCSCN-----GHAETCDPDTGSCLHCRDHTAG--HSCER 896
Query: 142 VQSRKNFDPAGNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
DP R C ++ G + + C C G G +CD
Sbjct: 897 CLDGYYGDPVLGSGDHCRPCMCPDGPESLRQFAGSCFRSDDSQQAVCVCSTGYRGPRCDE 956
Query: 198 CDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
C Y E G C C CN + + +CD G+C C EG C+
Sbjct: 957 CSPGFYGSPSEVGGQCVPCRCNNNIDMLDPESCDRQSGECLRCLYYSEGTACQ 1009
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE 207
RC DT+ + G S CN G+C C PG G C+ C + E
Sbjct: 1067 RCAPDTWNMASGLGCQSCDCDPKHSYGTSCNQISGQCSCHPGFGGRTCNECKELFWGDPE 1126
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +C+C+P G + C+ G+C C + V G +C
Sbjct: 1127 VKCYACDCDPRGISEQ--QCNKANGRCVCVEGVSGPRC 1162
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 60/158 (37%), Gaps = 43/158 (27%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G K C+C+P GS+ CD GQC + R N R D
Sbjct: 768 GAKECQCDPQGSLSTV--CDPNGGQC-----------------RCRPN---VVGRSCD-- 803
Query: 160 RCKRDTYPLGHGGSLNLQCNS-----------EGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC T+ G G + +CN G+C C G G +CDRC H+ F
Sbjct: 804 RCAPATFQFGPSGCIACECNPLGSQSPFCDQLTGQCGCVVGAYGRQCDRCLPGHWGF--P 861
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
C+ C CN + CD G C C+D+ G C
Sbjct: 862 ACRPCSCN-----GHAETCDPDTGSCLHCRDHTAGHSC 894
>gi|2098725|gb|AAC53179.1| laminin alpha 3B chain [Mus musculus]
Length = 726
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 105/230 (45%), Gaps = 28/230 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR Y C AC C+ IGS + C+ G+C C PG+T
Sbjct: 455 GRCL-CRPGVEGPQCDSCRSGSYSFP---ICQACQCSTIGSYPVPCDPGNGQCDCLPGIT 510
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG--QCESAQLSSRGRVHTEL 140
G +CDRC YDF C+PAG++ DS G QC+ S V L
Sbjct: 511 GRQCDRCLSGAYDFPYCQGSGSVCHPAGTL------DSSLGYCQCKQHVASPTCSVCKPL 564
Query: 141 RVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
K + R C + G + +G C CK VTGD CD C+
Sbjct: 565 YWNLAKE---------NPRGCSECQCHEAGTLSGIGECGQEDGDCSCKAHVTGDACDTCE 615
Query: 200 VNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ ++ GC+ C+C+ G++ T C G C+C+++VEG QC+
Sbjct: 616 DGFFSLEKSNYFGCQGCQCDIGGAL--TTMCSGPSGVCQCREHVEGKQCQ 663
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 110/265 (41%), Gaps = 74/265 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D ++ ++ GG C++CQ + G NCEKC Y++ G
Sbjct: 304 CNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYFRPHGV 363
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S G C CKP +GD C+ C +Y+F
Sbjct: 364 PVDALHGCIPCSCDPERADDCDQGS-GHCHCKPNFSGDYCETCADGYYNF---------- 412
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP------AGNRIWDLRR 160
P C LR+ N+ P AGN ++
Sbjct: 413 ---------PFC---------------------LRIPVFPNYTPSPEDPVAGN----IKG 438
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
C + G L C+ GRC C+PGV G +CD C Y F C++C+C+ GS
Sbjct: 439 CDCNL-----EGVLPEICDDRGRCLCRPGVEGPQCDSCRSGSYSF--PICQACQCSTIGS 491
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD GQC+C + G QC
Sbjct: 492 YPVP--CDPGNGQCDCLPGITGRQC 514
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G C+ C D ++ N+ C C C+ G+L C+ G CQC+ V G +
Sbjct: 602 CKAHVTGDACDTCEDGFFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGVCQCREHVEGKQ 661
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 662 CQRPENNYY 670
>gi|242015975|ref|XP_002428614.1| Laminin alpha-2 chain precursor, putative [Pediculus humanus
corporis]
gi|212513277|gb|EEB15876.1| Laminin alpha-2 chain precursor, putative [Pediculus humanus
corporis]
Length = 2236
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 111/235 (47%), Gaps = 40/235 (17%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ + G C++C ++ + + C C+CN IGS++ C+ E G+C CKPG+ G KCD
Sbjct: 37 CKSNVTGRACDQCLSRHWGLTSGHGCRPCDCNVIGSISPSCDVETGQCTCKPGIGGLKCD 96
Query: 88 RCDVNHYDFGEAGCKSC-ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
C NHY F GC C EC G V CD G+C + VH + V +
Sbjct: 97 SCLPNHYGFSINGCLECQECKVPGHV-----CDLETGRCVCPPYTQ--GVHCQTCVSNS- 148
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCD 199
W + K D+ GGS QC+ G C C+ G G +CD CD
Sbjct: 149 ---------WGHKGIKGCTPCYCDS-----GGSEKSQCDFYTGECLCRKGFRGSRCDSCD 194
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNT--P-----NCDSVKGQCECKDNVEGAQCRS 247
Y+F CKSCEC+ AG+ T P CD G+C+CK NV G +C S
Sbjct: 195 HGFYNF--PFCKSCECDFAGTKSETCDPITKRCECDDDGGKCQCKANVIGQKCDS 247
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 16/113 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNC-----NPIGSLNLQCNSEGRC 75
G CL+C + GP+CE+C +Y GD F C +C C N S ++ E C
Sbjct: 556 GFCLNCSDNTGGPDCERCGQGFY---GDPFYGPCLSCPCPEPDRNFADSCHVIAGREPIC 612
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQC 125
CKPG +G CDRC + + E C+ CECN GSV + CD GQC
Sbjct: 613 NCKPGYSGKFCDRCAYGWFGYPERTGGFCQPCECNIYGSVSD--ECDEKTGQC 663
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 77/204 (37%), Gaps = 67/204 (32%)
Query: 24 GHCLDCQGDR-------DGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRC 75
GH D + R G +C+ C N + G CT C C+ GS QC+ G C
Sbjct: 120 GHVCDLETGRCVCPPYTQGVHCQTCVSNSWGHKGIKGCTPCYCDSGGSEKSQCDFYTGEC 179
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C+ G G +CD CD Y+F CKSCEC+ AG+ T CD +
Sbjct: 180 LCRKGFRGSRCDSCDHGFYNF--PFCKSCECDFAGTKSET--CDPIT------------- 222
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG-RCQCKPGVTGDK 194
+RC +C+ +G +CQCK V G K
Sbjct: 223 -----------------------KRC---------------ECDDDGGKCQCKANVIGQK 244
Query: 195 CDRCDVNHYDFGEA---GCKSCEC 215
CD C + E GC +C C
Sbjct: 245 CDSCKNGTFGIQEDNPNGCTACFC 268
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
E C CKPG +G CDRC + + E C+ CECN GSV + CD GQC C+
Sbjct: 609 EPICNCKPGYSGKFCDRCAYGWFGYPERTGGFCQPCECNIYGSVSD--ECDEKTGQCNCR 666
Query: 238 DNVEGAQC 245
+EG C
Sbjct: 667 PGIEGRDC 674
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 28 DCQGDRDGPNCEKCRDNY--YQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGD 84
+C+ G C++C + Y + FC C CN GS++ +C+ + G+C C+PG+ G
Sbjct: 613 NCKPGYSGKFCDRCAYGWFGYPERTGGFCQPCECNIYGSVSDECDEKTGQCNCRPGIEGR 672
Query: 85 KCDRCDVNHYDFGEAGCKSCE 105
C C GC CE
Sbjct: 673 DCTVCPTEMV-LTPKGCSVCE 692
>gi|74006161|ref|XP_545710.2| PREDICTED: usherin [Canis lupus familiaris]
Length = 5199
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 29/263 (11%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--- 52
C CN S C ++ + + G GG C DC+ + G NCE C+D +++ G +
Sbjct: 572 CQCNNHSRSCHYNISVDPFPFEHHRGGGGVCEDCEHNTTGRNCELCKDYFFRPVGADPSA 631
Query: 53 --FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C C+C+ +G+ N C+ G +C CK V+G +C++C Y+ E+ GC +C
Sbjct: 632 LDVCKPCDCDKVGTRNGDFLCDKIGGQCNCKRHVSGRQCNQCQNGFYNLQESDPDGCSAC 691
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+ +G+V C GQC+ A + H + ++F+ G C+
Sbjct: 692 NCSTSGTVDGDITCHQNSGQCKCKANVIGLRCDHCNFGYKFLRSFNDDG-----CEPCQC 746
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS++ CN G+C+CK G +CD C + Y CK+C+C+ AGS+
Sbjct: 747 NLH-----GSVSKLCNPLSGQCECKKEAKGLQCDTCREHFYGLDITSCKACDCDMAGSLS 801
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK +V G QC
Sbjct: 802 GT-VCDAKTGQCMCKPSVGGRQC 823
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 30/237 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCNS-EGRCQC 77
GG C +C+ G C +C++ +Y Q+S + C+ACNC+ G+++ + C+ G+C+C
Sbjct: 656 GGQC-NCKRHVSGRQCNQCQNGFYNLQESDPDGCSACNCSTSGTVDGDITCHQNSGQCKC 714
Query: 78 KPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G +CD C+ + F + GC+ C+CN GSV C+ + GQCE + ++G
Sbjct: 715 KANVIGLRCDHCNFGYKFLRSFNDDGCEPCQCNLHGSVSKL--CNPLSGQCECKK-EAKG 771
Query: 135 RVHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN-LQCNSE-GRCQCKPGVT 191
L+ + R++F G I + C D GSL+ C+++ G+C CKP V
Sbjct: 772 -----LQCDTCREHF--YGLDITSCKACDCDM-----AGSLSGTVCDAKTGQCMCKPSVG 819
Query: 192 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +C+ C ++ + C C C+ G+V + CD GQC CK V G C
Sbjct: 820 GRQCNECLEGYFYLQQNDSFLCLPCNCDKTGTVNGSLLCDKSTGQCPCKLGVTGLHC 876
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 107/235 (45%), Gaps = 38/235 (16%)
Query: 29 CQGDRDGPNCEKCRDNY--YQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C+ C Y + D+ C C CN GS++ CN G+C+CK G +
Sbjct: 714 CKANVIGLRCDHCNFGYKFLRSFNDDGCEPCQCNLHGSVSKLCNPLSGQCECKKEAKGLQ 773
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR-----VHTEL 140
CD C + Y CK+C+C+ AGS+ T CD+ GQC + S GR +
Sbjct: 774 CDTCREHFYGLDITSCKACDCDMAGSLSGT-VCDAKTGQC-MCKPSVGGRQCNECLEGYF 831
Query: 141 RVQSRKNF-------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+Q +F D G GSL L S G+C CK GVTG
Sbjct: 832 YLQQNDSFLCLPCNCDKTGTV----------------NGSL-LCDKSTGQCPCKLGVTGL 874
Query: 194 KCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C++C + Y+ GC+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 875 HCNQCVPHRYNLTSGNFQGCQMCECDSLGTLPGT-ICDPISGQCLCLPNRQGRRC 928
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 117/249 (46%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNY-YQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ G C +C + Y Y + D+F C CNC+ G++N L C+ S G+C CK
Sbjct: 810 GQCM-CKPSVGGRQCNECLEGYFYLQQNDSFLCLPCNCDKTGTVNGSLLCDKSTGQCPCK 868
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG C++C + Y+ GC+ CEC+ G++ T CD + GQC
Sbjct: 869 LGVTGLHCNQCVPHRYNLTSGNFQGCQMCECDSLGTLPGT-ICDPISGQC---------- 917
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCK--RDTYPLGHG-------------GSLNLQCNS 180
L + +R+ RRC + + + G G+++ CNS
Sbjct: 918 ----LCLPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHKMGAVHHICNS 962
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ V G+ CD C ++ F C+ C C+ +G++ T C V GQC C
Sbjct: 963 LTGQCICQDASVAGESCDHCRDLYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1020
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1021 KRFVTGSKC 1029
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 20/227 (8%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN-LQCNSE-GRCQCKPGVTGDK 85
+C+ + G C+ CR+++Y + C AC+C+ GSL+ C+++ G+C CKP V G +
Sbjct: 764 ECKKEAKGLQCDTCREHFYGLDITS-CKACDCDMAGSLSGTVCDAKTGQCMCKPSVGGRQ 822
Query: 86 CDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
C+ C ++ + C C C+ G+V + CD GQC +L G +H V
Sbjct: 823 CNECLEGYFYLQQNDSFLCLPCNCDKTGTVNGSLLCDKSTGQCP-CKLGVTG-LHCNQCV 880
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
R N +GN + C+ D+ G C+ G+C C P G +C++C
Sbjct: 881 PHRYNLT-SGN-FQGCQMCECDSL----GTLPGTICDPISGQCLCLPNRQGRRCNQCQPG 934
Query: 202 HY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD-NVEGAQC 245
Y G A GC C C+ G+V + C+S+ GQC C+D +V G C
Sbjct: 935 FYISPGNATGCLPCSCHKMGAVHHI--CNSLTGQCICQDASVAGESC 979
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G +C +C + Y + NF C C C+ +G+L C+ G+C C P G
Sbjct: 867 CKLGVTGLHCNQCVPHRYNLTSGNFQGCQMCECDSLGTLPGTICDPISGQCLCLPNRQGR 926
Query: 85 KCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y G A GC C C+ G+V + C+S+ GQC S G R
Sbjct: 927 RCNQCQPGFYISPGNATGCLPCSCHKMGAVHHI--CNSLTGQCICQDASVAGESCDHCR- 983
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 984 DLYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKRFVTGSKCDTC 1032
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G +C+ CRD Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 965 GQCICQDASVAGESCDHCRDLYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKR 1022
Query: 80 GVTGDKCDRC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
VTG KCD C +H D NP G K +GQ +S+
Sbjct: 1023 FVTGSKCDTCVPRASHLDVN---------NPLGCSKTPSQQPPPRGQVQSS 1064
>gi|833771|gb|AAA68093.1| nicein, partial [Mus musculus]
Length = 464
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 59/200 (29%)
Query: 19 RTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
+TG G CL+C + G +CE+CR+ +Y+ + C CNC+ GSL+ C++ G+C+CK
Sbjct: 2 QTGSGFRCLNCNDNTAGVHCERCREGFYRLRDRDRCLPCNCHSKGSLSAGCDNSGQCRCK 61
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
PGVTG +CDRC + +AGC
Sbjct: 62 PGVTGQRCDRCQPGFHMLSDAGC----------------------------------TRD 87
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
+ ++ S+ + DPAG ++ C+S GRC CKP VTG++CDRC
Sbjct: 88 QGQLDSKCDCDPAG---------------------ISGPCDS-GRCVCKPAVTGERCDRC 125
Query: 199 DVNHYDFGEA---GCKSCEC 215
Y A GC C C
Sbjct: 126 RPRDYHLDRANPEGCTQCFC 145
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GSL+ C++ G+C+CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 46 GSLSAGCDNSGQCRCKPGVTGQRCDRCQPGFHMLSDAGCTRDQGQLDSKCDCDPAGI--- 102
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CDS G+C CK V G +C
Sbjct: 103 SGPCDS--GRCVCKPAVTGERC 122
>gi|114672323|ref|XP_001141549.1| PREDICTED: laminin subunit alpha-1 isoform 1 [Pan troglodytes]
gi|410209156|gb|JAA01797.1| laminin, alpha 1 [Pan troglodytes]
Length = 3075
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 104/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GS + C+ E G C CK
Sbjct: 868 GECLKCLGNTDGAHCERCADGFY---GDAVTAKNCRACECHVKGSHSAVCHLETGLCDCK 924
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC+ C C+ AGS+ + C +GQC
Sbjct: 925 PNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSMSD--GCTD-EGQCHCVP-------- 973
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC Y G C+ E G C C P
Sbjct: 974 -----------GVAGKRC---DRCAHGFYAYQDGSCTPCDCPHTQNTCDPETGECVCPPH 1019
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ + E GC++C C+ GS + CD V G C+CK G C
Sbjct: 1020 TQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHH--RCDVVTGHCQCKSKFGGWAC 1074
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D K+ N G GG C++C + G NCE C D YY+
Sbjct: 327 CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTVGINCETCIDGYYRPHKV 386
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C CNC+P+GSL+ C + G+C CK G TG+KCDRC + +
Sbjct: 387 SPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLHNGKRPGQCPCKEGYTGEKCDRCQLGYK 446
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
D+ C SC CNP GS + P
Sbjct: 447 DY--PTCVSCGCNPVGSASDEP 466
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG+KCDRC + + D+ C SC CNP GS + P G C CK+NVE
Sbjct: 425 GQCPCKEGYTGEKCDRCQLGYKDY--PTCVSCGCNPVGSASDEP----CTGPCVCKENVE 478
Query: 242 GAQC 245
G C
Sbjct: 479 GKAC 482
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C G CE+C D ++ + C ACNC+ +GS + +C+ G CQCK
Sbjct: 1012 GECV-CPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGHCQCKSKFG 1070
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD+C + + DF + C C+C+ G+
Sbjct: 1071 GWACDQCSLGYRDFPD--CVPCDCDLRGT 1097
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCTACNCNPIGSLN-------LQCNS 71
G C+ C + G +CE+C +Y + GD C C C + N L
Sbjct: 755 GVCIACAHNTTGDHCEQCLPGFYGEPSRGTPGD--CQPCACPLTIASNNFSPTCHLNDGD 812
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
E C +C PG +G C+RC +Y C C+C+ +CDSV G+C
Sbjct: 813 EVVCDRCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPSEAGHCDSVTGECLK 872
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ GS + C+ E G C C
Sbjct: 873 CLGNTDG-AHCE---RCADGFYGDAVTAKNCRACECHV-----KGSHSAVCHLETGLCDC 923
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KP VTG +CD+C +Y GC+ C C+ AGS+ + C +GQC C V G +C
Sbjct: 924 KPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSMSD--GCTD-EGQCHCVPGVAGKRC 980
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H C C +G +CE+C YY Q G + C C+CNP GS++ C+ + G+C C
Sbjct: 1472 HDFRCDSCLLGYEGKHCERCSSGYYGNPQTPGGS-CQKCDCNPHGSVHGDCDRTSGQCVC 1530
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+ G +G +CD C+ H E C SC+ G + N
Sbjct: 1531 RLGASGLRCDECEPRHI-LMETDCVSCDDECVGVLLN 1566
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQCNSEG----RC 75
G CL+C + G +C+ C YY K + D AC +P S + C EG RC
Sbjct: 1417 GKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPASFSPTCVLEGDHDFRC 1476
Query: 76 -QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C G G C+RC +Y + C+ C+CNP GSV +CD GQC
Sbjct: 1477 DSCLLGYEGKHCERCSSGYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTSGQC 1528
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 176 LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVK 231
L+ + + RC C G G C+RC +Y + C+ C+CNP GSV +CD
Sbjct: 1468 LEGDHDFRCDSCLLGYEGKHCERCSSGYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTS 1525
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 1526 GQCVCRLGASGLRC 1539
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNSEGRCQCKPGVTGDKCD 87
C+ G C++C+ Y C +C CNP+GS + + C G C CK V G CD
Sbjct: 429 CKEGYTGEKCDRCQLGYKDYPT---CVSCGCNPVGSASDEPCT--GPCVCKENVEGKACD 483
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
RC Y+ E GC C C
Sbjct: 484 RCKPGFYNLKEKNPRGCSECFC 505
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQC 234
G CQCK G CD+C + + DF + C C+C+ G+ + N C G C
Sbjct: 1061 GHCQCKSKFGGWACDQCSLGYRDFPD--CVPCDCDLRGTSGDACNLEQGLCSCVEETGAC 1118
Query: 235 ECKDNVEGAQC 245
CK+NV G QC
Sbjct: 1119 PCKENVFGPQC 1129
>gi|395823207|ref|XP_003784882.1| PREDICTED: laminin subunit alpha-3 [Otolemur garnettii]
Length = 3213
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 112/259 (43%), Gaps = 62/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D ++ + GG C++C+ + G NCEKC YY+ G
Sbjct: 359 CNCHGHATDCYYDPDVEQQQASLNTQGVYAGGGVCINCKHNTAGVNCEKCAKGYYRPYGV 418
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + + S G C CKP G C++C +Y+F C
Sbjct: 419 PVDAPHGCIPCSCDPERAEDCEQGS-GHCHCKPNFHGANCEKCAAGYYNF-----PFCLR 472
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P + +TP+ + DPA D++ C
Sbjct: 473 TPIFPI-STPSPE-----------------------------DPAAG---DIKGCDCHL- 498
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G L C+ GRC C+PGV G +CD C Y F C++C C+ GS + TP
Sbjct: 499 ----EGVLPEICDGHGRCLCRPGVQGPRCDTCRSGFYSF--PICQACWCSALGSYQ-TP- 550
Query: 227 CDSVKGQCECKDNVEGAQC 245
C V GQCEC+ + G +C
Sbjct: 551 CHPVTGQCECRPGITGQRC 569
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 111/231 (48%), Gaps = 25/231 (10%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKP 79
GHG CL C+ GP C+ CR +Y C AC C+ +GS C+ G+C+C+P
Sbjct: 508 GHG-RCL-CRPGVQGPRCDTCRSGFYSFP---ICQACWCSALGSYQTPCHPVTGQCECRP 562
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G+TG +CDRC +DF S CNPAG++ ++ K ES S ++
Sbjct: 563 GITGQRCDRCLSGAHDFPHCQGFSHACNPAGTIDSSLGYCQCKLHVESPTCSICKPLYWN 622
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
L + +P G C+ DT G +C E G C CK V GD CD C
Sbjct: 623 LATE-----NPHG-----CSECRCDTAGTVSGVG---ECGQEDGDCHCKSHVGGDSCDTC 669
Query: 199 DVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 670 EDGYFALDKSNYFGCQGCQCDVGGALSSM--CSGPSGVCQCREHVVGRACQ 718
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 91/201 (45%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G++ C+ +G +C C+P V G +C RC HY F CK+C C
Sbjct: 1231 CECHPTGAIGHPCSPQGGQCPCRPNVIGRQCTRCAPGHYGFPH--CKACSC-------GR 1281
Query: 116 PNCDSVKGQCESAQLSSRGR-----VHTELRVQSRKNFDPAG-----NRIWDLRRCKRDT 165
CD + GQC + R + H+ +F P N C R
Sbjct: 1282 RLCDEMTGQCLCPPRTVRPQCEACEAHS-------FSFHPLAGCEGCN-------CSRR- 1326
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
G G+ C+ + G+C+CKP +TG +CDRC + F E C C CN G+
Sbjct: 1327 ---GTVGAATPACDRDSGQCRCKPRITGRQCDRCASGFHRFPE--CVPCHCNRDGAEPGV 1381
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD G C CK+NVEG++C
Sbjct: 1382 --CDPRTGACLCKENVEGSEC 1400
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+P V G +C RC HY F CK+C C CD + GQC C
Sbjct: 1248 GQCPCRPNVIGRQCTRCAPGHYGFPH--CKACSCG-------RRLCDEMTGQCLCPPRTV 1298
Query: 242 GAQCRS 247
QC +
Sbjct: 1299 RPQCEA 1304
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 657 CKSHVGGDSCDTCEDGYFALDKSNYFGCQGCQCDVGGALSSMCSGPSGVCQCREHVVGRA 716
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 717 CQRPENNYY 725
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 58/139 (41%), Gaps = 35/139 (25%)
Query: 1 CNCNGFSNRC-------FFDKELYNRTGHGGHCLDCQGDRDGPN---CEKCRDNYYQKSG 50
CNCNG SNRC + +R G G H R+G C + +Q +G
Sbjct: 1652 CNCNGHSNRCQDGSGICIRVRAAMHREGEGSH------HREGEGSCWCPEKPPGGWQTAG 1705
Query: 51 DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCEC 106
F T C N RC CK G TG +C+RC ++ FG C+ C C
Sbjct: 1706 --FATGCVVN---------GGNVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCNC 1753
Query: 107 NPAGSVKNTPNCDSVKGQC 125
N G + +C+ + G+C
Sbjct: 1754 NSNG---QSGSCNPLTGEC 1769
>gi|125814641|ref|XP_684538.2| PREDICTED: laminin subunit beta-1 [Danio rerio]
Length = 1767
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 102/230 (44%), Gaps = 44/230 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CN S+ C FD +Y +G+ GG C DC+ + G CE C+ YY+ +
Sbjct: 330 CECNRHSDSCHFDMAVYLSSGNRSGGVCDDCEHNTQGQWCENCKPFYYKHPQRDIRDPRI 389
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGC 101
C C+C+P GSL ++ G+C CK V G +CD C HY + GC
Sbjct: 390 CEPCDCDPRGSLYEGLCDSATNVMRDMIAGQCHCKANVEGQRCDHCKKGHYGLSDDPLGC 449
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--- 158
+SC CNP G++ CD G C R+ + +N D + W L
Sbjct: 450 RSCSCNPLGTLPGGTPCDIQTGSCYCK------------RLVTGRNCDQCLPQHWGLSND 497
Query: 159 ----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C+ E G+C CK + G +CD+ +Y
Sbjct: 498 MDGCRPCDCDV-----GGALNNNCSQETGQCACKEHMFGRRCDQLQSGYY 542
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + C+D + S N C C+P GSL+ C+ G +CQC+P V+G CD C
Sbjct: 736 PLTDICKDYIFSVSALLHNGALECKCDPRGSLSTVCDPIGGQCQCRPNVSGKNCDACAPA 795
Query: 93 HYDFGEAGCKSCECNPAGS 111
Y FG +GC++C+CNP GS
Sbjct: 796 TYLFGPSGCRACDCNPLGS 814
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 105/236 (44%), Gaps = 26/236 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + G NC+ C Y G + C AC+CNP+GS NL C+ S G+C C PG
Sbjct: 775 GGQC-QCRPNVSGKNCDACAPATY-LFGPSGCRACDCNPLGSQNLFCHPSNGQCLCVPGA 832
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV--HTE 139
G +C C NH+ G CK C CN N+ C + G+C L+ RG H
Sbjct: 833 FGRQCGNCKPNHW--GYPTCKPCSCN-----GNSEQCHPLTGKC----LNCRGHTSGHNC 881
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-----NSEGRCQCKPGVTGDK 194
R +S + R C P G G + C + C C G G K
Sbjct: 882 ERCESGYHRSTLLGSRDQCRPCMCPNGP-GSGMQFSESCYQNPNTLQMVCVCNAGYKGPK 940
Query: 195 CDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
C+ C +Y C C+CN ++++ +CD+ G C +C + +G +C+
Sbjct: 941 CEECASGYYGNTRVPGGRCHPCQCNGNINMQDPESCDARTGACLKCLFHTDGTECQ 996
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 74/185 (40%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC--------NSEGRC 75
G CL C DG C+ C YY + C C CN +GS C G+C
Sbjct: 981 GACLKCLFHTDGTECQYCSRGYYGDARSQNCRRCMCNLVGSSRQSCVDGLCECDRISGQC 1040
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C PGV G CDRC N ++ GC+ C C+P S ++ CD + GQC S + G
Sbjct: 1041 PCLPGVEGQLCDRCAPNTWNINSGRGCQPCRCHPEHSYSSS--CDLLSGQC-SCKPGFGG 1097
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
+ E R W + G QCN + G C C GV G
Sbjct: 1098 KTCEECR-----------ELFWGDPEVECHACDCDPRGIATQQCNKTSGDCVCIEGVAGR 1146
Query: 194 KCDRC 198
+CD C
Sbjct: 1147 RCDTC 1151
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V+G CD C Y FG +GC++C+CNP GS C
Sbjct: 765 GSLSTVCDPIGGQCQCRPNVSGKNCDACAPATYLFGPSGCRACDCNPLGS--QNLFCHPS 822
Query: 231 KGQCECKDNVEGAQC 245
GQC C G QC
Sbjct: 823 NGQCLCVPGAFGRQC 837
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C CK V G +CD C HY + GC+SC CNP G++ CD G C CK
Sbjct: 419 GQCHCKANVEGQRCDHCKKGHYGLSDDPLGCRSCSCNPLGTLPGGTPCDIQTGSCYCKRL 478
Query: 240 VEGAQC 245
V G C
Sbjct: 479 VTGRNC 484
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 96/236 (40%), Gaps = 38/236 (16%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQ----CNSE-GRC-QCKPG 80
C GP CE+C YY + C C CN G++N+Q C++ G C +C
Sbjct: 932 CNAGYKGPKCEECASGYYGNTRVPGGRCHPCQCN--GNINMQDPESCDARTGACLKCLFH 989
Query: 81 VTGDKCDRCDVNHY-DFGEAGCKSCECNPAGS-----VKNTPNCDSVKGQCE-----SAQ 129
G +C C +Y D C+ C CN GS V CD + GQC Q
Sbjct: 990 TDGTECQYCSRGYYGDARSQNCRRCMCNLVGSSRQSCVDGLCECDRISGQCPCLPGVEGQ 1049
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG 189
L R +T + S + P RC + + S +L G+C CKPG
Sbjct: 1050 LCDRCAPNT-WNINSGRGCQPC--------RCHPEH---SYSSSCDLL---SGQCSCKPG 1094
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C + E C +C+C+P G T C+ G C C + V G +C
Sbjct: 1095 FGGKTCEECRELFWGDPEVECHACDCDPRGIA--TQQCNKTSGDCVCIEGVAGRRC 1148
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 109/265 (41%), Gaps = 64/265 (24%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCNPIGS-----LNLQCNS 71
GHC+ C G NCE+C D Y + N C C CN + + +S
Sbjct: 291 GHCM-CNHHTTGLNCEECEDFYQDQPWRPAVGRETNACKKCECNRHSDSCHFDMAVYLSS 349
Query: 72 EGRC-----QCKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDS 120
R C+ G C+ C +Y + C+ C+C+P GS+
Sbjct: 350 GNRSGGVCDDCEHNTQGQWCENCKPFYYKHPQRDIRDPRICEPCDCDPRGSL-------- 401
Query: 121 VKGQCESAQLSSR----GRVHTELRVQSRK-----------NFDPAGNRIWDLRRCKRDT 165
+G C+SA R G+ H + V+ ++ + DP G R C +
Sbjct: 402 YEGLCDSATNVMRDMIAGQCHCKANVEGQRCDHCKKGHYGLSDDPLG-----CRSCSCN- 455
Query: 166 YPLGH---GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPAGS 220
PLG G ++Q G C CK VTG CD+C H+ GC+ C+C+ G+
Sbjct: 456 -PLGTLPGGTPCDIQT---GSCYCKRLVTGRNCDQCLPQHWGLSNDMDGCRPCDCDVGGA 511
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ N NC GQC CK+++ G +C
Sbjct: 512 LNN--NCSQETGQCACKEHMFGRRC 534
>gi|301627181|ref|XP_002942755.1| PREDICTED: netrin-4-like, partial [Xenopus (Silurana) tropicalis]
Length = 339
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 38/206 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD +++ +G+ GG C +CQ + +G C++C+ +++ S +
Sbjct: 44 CKCNGHADSCHFDMDVWLGSGNRTGGVCDNCQHNTEGSQCQRCKPGFFRDLKMPFSAPDA 103
Query: 54 CTACNCNPIGSLNLQCN-------SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C AC+C+PIGS L + G C CKPGV G CD+C V ++ FGE GC+ C+C
Sbjct: 104 CKACSCHPIGSAVLPFGNITLCDPTNGDCPCKPGVAGPHCDQCMVGYWGFGEYGCRPCDC 163
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
AGS CD G C T L + + F P +++ + R T+
Sbjct: 164 --AGS------CDPFTGDCI-----------TNLDIDWYREF-PELLSVYNESQLSR-TW 202
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTG 192
G S G+C+CK V G
Sbjct: 203 EDEQGFS---ALRHSGKCECKEQVLG 225
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 12/73 (16%)
Query: 166 YPLGHG----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+P+G G++ L + G C CKPGV G CD+C V ++ FGE GC+ C+C AGS
Sbjct: 110 HPIGSAVLPFGNITLCDPTNGDCPCKPGVAGPHCDQCMVGYWGFGEYGCRPCDC--AGS- 166
Query: 222 KNTPNCDSVKGQC 234
CD G C
Sbjct: 167 -----CDPFTGDC 174
>gi|291416200|ref|XP_002724335.1| PREDICTED: laminin, gamma 1, partial [Oryctolagus cuniculus]
Length = 751
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 101/200 (50%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ S + C AC+CNP G+L Q CN G+C
Sbjct: 138 GECLKCIYNTAGFYCDRCKDGFFGNPLAPSPTDKCRACDCNPYGTLRQQGGCNPVTGQCA 197
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V G C C+ Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 198 CLPHVAGRDCGACEPGFYNLQSGRGCERCDCHALGSTDG--QCDIRTGQCE-CQPGVTGQ 254
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+PG G +
Sbjct: 255 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCGEDGRCECRPGFVGSR 302
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 303 CDQCEENYFYNRSWPGCQEC 322
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 111/245 (45%), Gaps = 49/245 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
C +C G CE C D Y+ GD C C C S N+ N+ G C
Sbjct: 83 CTNCPTGTTGKRCELCDDGYF---GDPLGRGGPVRLCRPCQC----SDNVDPNAVGNCDR 135
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQ 124
+C G CDRC + A C++C+CNP G+++ C+ V GQ
Sbjct: 136 STGECLKCIYNTAGFYCDRCKDGFFGNPLAPSPTDKCRACDCNPYGTLRQQGGCNPVTGQ 195
Query: 125 CESAQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
C V R +P + R C+R D + LG S + QC+
Sbjct: 196 CACLP-----------HVAGRDCGACEPGFYNLQSGRGCERCDCHALG---STDGQCDIR 241
Query: 182 -GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C+C+PGVTG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC+
Sbjct: 242 TGQCECQPGVTGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCGED---GRCECRPGF 298
Query: 241 EGAQC 245
G++C
Sbjct: 299 VGSRC 303
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 113/264 (42%), Gaps = 41/264 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC-TACNC 59
C CNG S C D E G C +C+ + GP+CE+C D +Y GD+ T+ +C
Sbjct: 15 CTCNGHSETC--DPET-------GVC-NCRDNTAGPHCERCGDGFY---GDSTAGTSADC 61
Query: 60 NP---IGSLN---LQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCEC 106
P GS + + E C C G TG +C+ CD ++ G G C+ C+C
Sbjct: 62 QPCPCPGSSSCAVVPTTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRGGPVRLCRPCQC 121
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDT 165
+ NCD G+C ++ G R + +P D R C +
Sbjct: 122 SDNVDPNAVGNCDRSTGECLKCIYNTAGFYCD--RCKDGFFGNPLAPSPTDKCRACDCNP 179
Query: 166 YPLGHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
Y G+L Q CN G+C C P V G C C+ Y+ GC+ C+C+ GS
Sbjct: 180 Y-----GTLRQQGGCNPVTGQCACLPHVAGRDCGACEPGFYNLQSGRGCERCDCHALGST 234
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ V G C
Sbjct: 235 DG--QCDIRTGQCECQPGVTGQHC 256
>gi|405974476|gb|EKC39117.1| Laminin subunit beta-1 [Crassostrea gigas]
Length = 891
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 104/236 (44%), Gaps = 56/236 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCNG S+RC FD +Y G GG CLDCQ + G NC++C D +YQ
Sbjct: 329 CNCNGHSDRCKFDPAVYEANGGISGGVCLDCQHNTMGRNCQQCTDMFYQDPYQDIRSSTI 388
Query: 54 CTACNCNPIGS-LNLQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P GS L +C+ GRC CK V G +CD C Y+ E+ G
Sbjct: 389 CKPCDCDPSGSLLGGRCDDHSDERNGLVAGRCHCKDHVEGKRCDTCKDGFYNLDESNQQG 448
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C+C+ G+V N+ +CD G C + + R T
Sbjct: 449 CEACDCSMIGTVTNS-SCDKDSGMCLCKRYVTGERCDT---------------------- 485
Query: 161 CKRDTYPLGH------------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C Y L GGS++ C+ + G C CKP + G +C+ +Y
Sbjct: 486 CYHGFYGLSDIDTGCTPCDCDVGGSISEACDQTTGACTCKPNIIGKQCNEPRPGYY 541
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 114/285 (40%), Gaps = 57/285 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNY-------YQKSGDN 52
C+C G ++RC NR G C+ C + G NCE+C+D Y +++ N
Sbjct: 266 CSCYGHASRCEPVDGYNNRPDMVHGQCV-CTHNTKGRNCEQCQDFYNDLPWRPARQNASN 324
Query: 53 FCTACNCN------PIGSLNLQCN---SEGRC-QCKPGVTGDKCDRCDVNHYD------F 96
C CNCN + N S G C C+ G C +C Y
Sbjct: 325 ACKKCNCNGHSDRCKFDPAVYEANGGISGGVCLDCQHNTMGRNCQQCTDMFYQDPYQDIR 384
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV----HTELRVQSRK------ 146
CK C+C+P+GS+ + G+C+ G V H + V+ ++
Sbjct: 385 SSTICKPCDCDPSGSL--------LGGRCDDHSDERNGLVAGRCHCKDHVEGKRCDTCKD 436
Query: 147 ---NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH 202
N D + + + C G N C+ + G C CK VTG++CD C
Sbjct: 437 GFYNLDESNQQGCEACDCSM------IGTVTNSSCDKDSGMCLCKRYVTGERCDTCYHGF 490
Query: 203 YDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y + GC C+C+ GS+ CD G C CK N+ G QC
Sbjct: 491 YGLSDIDTGCTPCDCDVGGSISEA--CDQTTGACTCKPNIIGKQC 533
>gi|397494172|ref|XP_003817959.1| PREDICTED: laminin subunit alpha-1 [Pan paniscus]
Length = 3075
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 104/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GS + C+ E G C CK
Sbjct: 868 GECLKCLGNTDGAHCERCADGFY---GDAVTAKNCRACECHVKGSHSAVCHLETGLCDCK 924
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC+ C C+ AGS+ + C +GQC
Sbjct: 925 PNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSMSD--GCTD-EGQCHCVP-------- 973
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC Y G C+ E G C C P
Sbjct: 974 -----------GVAGKRC---DRCAHGFYAYQDGSCTPCDCPHTQNTCDPETGECVCPPH 1019
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ + E GC++C C+ GS + CD V G C+CK G C
Sbjct: 1020 TQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHH--RCDVVTGHCQCKSKFGGRAC 1074
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D K+ N G GG C++C + G NCE C D YY+
Sbjct: 327 CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTVGINCETCIDGYYRPHKV 386
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C CNC+P+GSL+ C + G+C CK G TG+KCDRC + +
Sbjct: 387 SPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLHNGKRPGQCLCKEGYTGEKCDRCQLGYK 446
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
D+ C SC CNP GS + P
Sbjct: 447 DY--PTCVSCGCNPVGSASDEP 466
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG+KCDRC + + D+ C SC CNP GS + P G C CK+NVE
Sbjct: 425 GQCLCKEGYTGEKCDRCQLGYKDY--PTCVSCGCNPVGSASDEP----CTGPCVCKENVE 478
Query: 242 GAQC 245
G C
Sbjct: 479 GKAC 482
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C G CE+C D ++ + C ACNC+ +GS + +C+ G CQCK
Sbjct: 1012 GECV-CPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGHCQCKSKFG 1070
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD+C + + DF + C C+C+ G+
Sbjct: 1071 GRACDQCSLGYRDFPD--CVPCDCDLRGT 1097
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCTACNCNPIGSLN-------LQCNS 71
G C+ C + G +CE+C +Y + GD C C C + N L
Sbjct: 755 GVCIACAHNTTGDHCEQCLPGFYGEPSRGTPGD--CQPCACPLTIASNNFSPTCHLNDGD 812
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
E C +C PG +G C+RC +Y C C+C+ +CDSV G+C
Sbjct: 813 EVVCDRCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPSEAGHCDSVTGECLK 872
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ GS + C+ E G C C
Sbjct: 873 CLGNTDG-AHCE---RCADGFYGDAVTAKNCRACECHV-----KGSHSAVCHLETGLCDC 923
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KP VTG +CD+C +Y GC+ C C+ AGS+ + C +GQC C V G +C
Sbjct: 924 KPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSMSD--GCTD-EGQCHCVPGVAGKRC 980
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H C C +G +CE+C YY Q G + C C+CNP GS++ C+ + G+C C
Sbjct: 1472 HDFRCDACLLGYEGKHCERCSSGYYGNPQTLGGS-CQKCDCNPHGSVHGDCDRTSGQCVC 1530
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+ G +G +CD C+ H E C SC+ G + N
Sbjct: 1531 RLGASGLRCDECEPRHI-LMETDCVSCDDECVGVLLN 1566
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQCNSEG----RC 75
G CL+C + G +C+ C YY K + D AC +P S + C EG RC
Sbjct: 1417 GKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPASFSPTCVLEGDHDFRC 1476
Query: 76 -QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C G G C+RC +Y + C+ C+CNP GSV +CD GQC
Sbjct: 1477 DACLLGYEGKHCERCSSGYYGNPQTLGGSCQKCDCNPHGSVHG--DCDRTSGQC 1528
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 1 CNCN---GFSNRCFFDKELYNRTGHG---GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC 54
CNC+ S+ C D +L++ +G G CL C+ G C++C+ Y C
Sbjct: 397 CNCDPVGSLSSVCIKD-DLHSDLHNGKRPGQCL-CKEGYTGEKCDRCQLGYKDYPT---C 451
Query: 55 TACNCNPIGSLNLQ-CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
+C CNP+GS + + C G C CK V G CDRC Y+ E GC C C
Sbjct: 452 VSCGCNPVGSASDEPCT--GPCVCKENVEGKACDRCKPGFYNLKEKNPRGCSECFC 505
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 176 LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVK 231
L+ + + RC C G G C+RC +Y + C+ C+CNP GSV +CD
Sbjct: 1468 LEGDHDFRCDACLLGYEGKHCERCSSGYYGNPQTLGGSCQKCDCNPHGSVHG--DCDRTS 1525
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 1526 GQCVCRLGASGLRC 1539
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQC 234
G CQCK G CD+C + + DF + C C+C+ G+ + N C G C
Sbjct: 1061 GHCQCKSKFGGRACDQCSLGYRDFPD--CVPCDCDLRGTSGDACNLEQGLCSCVEETGAC 1118
Query: 235 ECKDNVEGAQC 245
CK+NV G QC
Sbjct: 1119 PCKENVFGPQC 1129
>gi|350408641|ref|XP_003488468.1| PREDICTED: laminin subunit alpha-like [Bombus impatiens]
Length = 3666
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 105/238 (44%), Gaps = 48/238 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C++C YY C ACNC+ GS C++EG+CQC+ G +C +
Sbjct: 603 CLANFAGRTCDQCSPGYYMYPE---CIACNCDSHGSXGASCDAEGKCQCRENFDGGRCSQ 659
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQS 144
C Y+F C+ C C+PAG V+ C S+ QC + RV + Q
Sbjct: 660 CKEGFYNF--PTCEGCNCDPAGVVETFQGCGSLPAGELCQC-------KDRVEGRICNQC 710
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------------SEGRCQCKPGVT 191
+ + W+L+ P G QCN G+C CKPGVT
Sbjct: 711 KPLY-------WNLQ-------PYNPQGCEECQCNIPGVIGNIGECDTKNGQCICKPGVT 756
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C++C Y+ E+ GC C C+ GSV + CD + GQC+C+ V G C+
Sbjct: 757 DRSCNQCVDGTYNLQESNFFGCTDCACDIGGSVNSV--CDKLTGQCQCQPRVTGLTCK 812
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C C D YY CT CNC+ G+ C+ ++G C CK G G +CD
Sbjct: 512 CKNNYGGRTCNICEDGYYNYP---LCTFCNCDARGTEPGVCDKTDGWCLCKKGYGGPRCD 568
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C +N Y +G C+ C C+ GS ++ +CD+V G+C S + GR +
Sbjct: 569 QC-INGY-YGFPNCRPCNCSLTGS--SSISCDAV-GKC-SCLANFAGRTCDQC------- 615
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P + C D++ GS C++EG+CQC+ G +C +C Y+F
Sbjct: 616 -SPGYYMYPECIACNCDSH-----GSXGASCDAEGKCQCRENFDGGRCSQCKEGFYNF-- 667
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQC 245
C+ C C+PAG V+ C S+ C+CKD VEG C
Sbjct: 668 PTCEGCNCDPAGVVETFQGCGSLPAGELCQCKDRVEGRIC 707
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ GP C++C + YY G C CNC+ GS ++ C++ G+C C G
Sbjct: 554 GWCL-CKKGYGGPRCDQCINGYY---GFPNCRPCNCSLTGSSSISCDAVGKCSCLANFAG 609
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
CD+C +Y + E C +C C+ GS + CD+ +G+C+ + GR Q
Sbjct: 610 RTCDQCSPGYYMYPE--CIACNCDSHGSXGAS--CDA-EGKCQCRENFDGGRCS-----Q 659
Query: 144 SRKNF-----------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
++ F DPAG + + C + P G CQCK V G
Sbjct: 660 CKEGFYNFPTCEGCNCDPAG-VVETFQGC--GSLPAGE------------LCQCKDRVEG 704
Query: 193 DKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C++C +++ + GC+ C+CN G + N CD+ GQC CK V C
Sbjct: 705 RICNQCKPLYWNLQPYNPQGCEECQCNIPGVIGNIGECDTKNGQCICKPGVTDRSC 760
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
+ G C C + G C+ C D++Y C AC+C I S + QC+ + G+C+CKPG
Sbjct: 1964 YTGQCY-CHENVVGEQCDHCADDHYGYDTCEGCKACDCG-IASESSQCDDATGQCRCKPG 2021
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C ++++G GC SCECN SV + C++ GQC
Sbjct: 2022 VTGRRCDQCISGYWNYGPEGCTSCECNIGYSVGVS--CNTTTGQC 2064
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 179 NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
++ G+C+CKPGVTG +CD+C ++++G GC SCECN SV + C++ GQC C
Sbjct: 2011 DATGQCRCKPGVTGRRCDQCISGYWNYGPEGCTSCECNIGYSVGVS--CNTTTGQCSCLP 2068
Query: 239 NVEGAQC 245
V G +C
Sbjct: 2069 GVIGEKC 2075
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C C P V G++CD+C+V Y F GC+ C C+P G + CD + G C+CK+NV
Sbjct: 1422 GACSCPPRVIGERCDQCEVGTYGFHPIVGCEECNCSPLGVIDGDLQCDFLNGNCKCKENV 1481
Query: 241 EGAQC 245
G QC
Sbjct: 1482 VGRQC 1486
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 41 CRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
CRD+ + + + N CNCN GS++L+C G +C C+ + G +C+ C Y F
Sbjct: 1345 CRDSIFSLTANYNNRALPCNCNINGSISLECEKFGGQCPCRANIIGRRCEICKTGFYGF- 1403
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ---SRKNFDPAGNR 154
CK C C +T C+ G C S RV E Q F P
Sbjct: 1404 -PNCKPCSC------PSTALCEPETGAC-----SCPPRVIGERCDQCEVGTYGFHP---- 1447
Query: 155 IWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 212
+ C+ + PLG +LQC+ G C+CK V G +CD+C + F C+
Sbjct: 1448 ---IVGCEECNCSPLGVIDG-DLQCDFLNGNCKCKENVVGRQCDKCRSGYSQFPH--CEK 1501
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+C+ G+ N CD +C CK+NV+G+ C
Sbjct: 1502 CDCDIRGTTANI--CDQYTAECFCKENVQGSAC 1532
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 108/261 (41%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C D E G CLDC+ G +CE C+ YY + C C
Sbjct: 1790 CECNGHADTC--DVE-------TGVCLDCKDGTTGDHCELCKQGYYGNATGGTPTDCLIC 1840
Query: 58 NCN-PIGSLNL----QCNSEG---RCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCEC 106
C P S N + N EG C C G G +C+ C Y E CK C+C
Sbjct: 1841 ACPLPFPSNNFATGCEVNEEGNKISCDCLAGYYGARCESCVSGFYGNPEVYGDYCKPCKC 1900
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ +CDS G+C ++ G + + F A R D R C
Sbjct: 1901 SGNIDTNQVGSCDSRTGECLRCLNNTYGEA---CNLCAPGFFGDAVER-KDCRTCSCKEC 1956
Query: 167 PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT 224
+ H C+S G+C C V G++CD C +HY + GCK+C+C G +
Sbjct: 1957 GMKH-------CDSYTGQCYCHENVVGEQCDHCADDHYGYDTCEGCKACDC---GIASES 2006
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQC CK V G +C
Sbjct: 2007 SQCDDATGQCRCKPGVTGRRC 2027
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
GG C C+ + G CE C+ +Y G C C+C P +L C E G C C P
Sbjct: 1378 FGGQC-PCRANIIGRRCEICKTGFY---GFPNCKPCSC-PSTAL---CEPETGACSCPPR 1429
Query: 81 VTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCE 126
V G++CD+C+V Y F GC+ C C+P G + CD + G C+
Sbjct: 1430 VIGERCDQCEVGTYGFHPIVGCEECNCSPLGVIDGDLQCDFLNGNCK 1476
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 21/195 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G CL C + G C C ++ + + C C+C G C+S G+C C V
Sbjct: 1917 GECLRCLNNTYGEACNLCAPGFFGDAVERKDCRTCSCKECGMK--HCDSYTGQCYCHENV 1974
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G++CD C +HY + GCK+C+C G + CD GQC + GR +
Sbjct: 1975 VGEQCDHCADDHYGYDTCEGCKACDC---GIASESSQCDDATGQCR-CKPGVTGR-RCDQ 2029
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCD 199
+ N+ P G C+ + G S+ + CN+ G+C C PGV G+KCD C
Sbjct: 2030 CISGYWNYGPEG-----CTSCECNI-----GYSVGVSCNTTTGQCSCLPGVIGEKCDHCP 2079
Query: 200 VNHYDFGEAGCKSCE 214
+ GC +C+
Sbjct: 2080 YRNVLIPGQGCFACD 2094
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL-----QCNSEGRCQCKPGV 81
C+ + DG C +C++ +Y NF C CNC+P G + + CQCK V
Sbjct: 648 CRENFDGGRCSQCKEGFY-----NFPTCEGCNCDPAGVVETFQGCGSLPAGELCQCKDRV 702
Query: 82 TGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G C++C +++ + GC+ C+CN G + N CD+ GQC + G
Sbjct: 703 EGRICNQCKPLYWNLQPYNPQGCEECQCNIPGVIGNIGECDTKNGQC----ICKPGVTDR 758
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
++ + + C D GGS+N C+ G+CQC+P VTG C
Sbjct: 759 SCNQCVDGTYNLQESNFFGCTDCACDI-----GGSVNSVCDKLTGQCQCQPRVTGLTCKE 813
Query: 198 CDVNHY 203
HY
Sbjct: 814 PLKAHY 819
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 110/263 (41%), Gaps = 43/263 (16%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC G S+ C +D E ++ GG C +C+ + +G NC +C+ +Y+
Sbjct: 330 CNCFGHSDECEYDTEVDEKHLSLDIHGNYEGGGVCKNCRDNTEGINCNRCKPMFYRPRNK 389
Query: 49 --SGDNFCTACNCNPIGSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
+ + C C CN NL N + G+C+C+ T CD C +Y G C
Sbjct: 390 PLNATDVCQPCQCN---GFNLTGNCADATGKCECRKEYTSPNCDSCSYGYY--GYPNCVP 444
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+C G+ + +C ++ G C S+ + L Q F + C+
Sbjct: 445 CQCYSNGT--HGDHCKAIDGSCPCK--SNYAGHYCNLCAQGYYKFP-------ECLPCEC 493
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
++ GSLN C+ G C CK G C+ C+ +Y++ C C C+ G+
Sbjct: 494 NSL-----GSLNDNCDVISGNCTCKNNYGGRTCNICEDGYYNY--PLCTFCNCDARGTEP 546
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
CD G C CK G +C
Sbjct: 547 GV--CDKTDGWCLCKKGYGGPRC 567
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 104/266 (39%), Gaps = 70/266 (26%)
Query: 17 YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-KSGDN--FCTACNCNPIGSLNLQCNSE- 72
YN G C + +G +CE+C YY+ SG + +C +C CN C+ E
Sbjct: 1747 YNVPASGVEQCQCPPNYEGLSCEECAPGYYRVDSGPHGGYCVSCECNGHAD---TCDVET 1803
Query: 73 GRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKS-------------------CECNPAGSV 112
G C CK G TGD C+ C +Y G + CE N G
Sbjct: 1804 GVCLDCKDGTTGDHCELCKQGYYGNATGGTPTDCLICACPLPFPSNNFATGCEVNEEG-- 1861
Query: 113 KNTPNCDSVKG----QCES--AQLSSRGRVHTEL----RVQSRKNFDPAG---NRIWDLR 159
N +CD + G +CES + V+ + + + + G +R +
Sbjct: 1862 -NKISCDCLAGYYGARCESCVSGFYGNPEVYGDYCKPCKCSGNIDTNQVGSCDSRTGECL 1920
Query: 160 RCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
RC +TY G + NL C PG GD +R D C++C C G
Sbjct: 1921 RCLNNTY----GEACNL---------CAPGFFGDAVERKD----------CRTCSCKECG 1957
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+CDS GQC C +NV G QC
Sbjct: 1958 ----MKHCDSYTGQCYCHENVVGEQC 1979
>gi|432105401|gb|ELK31616.1| Laminin subunit alpha-1 [Myotis davidii]
Length = 2891
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 107/233 (45%), Gaps = 42/233 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C YY C CNC+P GSL+ C EG+C C PGV G +CDR
Sbjct: 908 CRARVTGEQCDQCLHGYYGLDTGLGCLPCNCSPSGSLSDDCTEEGQCHCMPGVAGKRCDR 967
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C Y F + GC C+C +NT CD G+C +RG +R + ++
Sbjct: 968 CARGFYAFQDGGCTPCDC---ADTQNT--CDPESGECVCPP-HTRG-----VRCEECED- 1015
Query: 149 DPAGNRIWDLRR------CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
G +DL C + GS + +C G CQCKP G C +C +
Sbjct: 1016 ---GYWGYDLELGCQACNCSSE-------GSASHRCEVLTGHCQCKPVFGGPSCHQCALG 1065
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVK---------GQCECKDNVEGAQC 245
DF + C +C+C+ G+V +T CD + G C CK+NV G QC
Sbjct: 1066 FRDFPD--CVACDCDLRGTVVDT--CDEEQGLCSCAQGTGTCSCKENVLGLQC 1114
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 108/237 (45%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GSL+ C+ E G C C+
Sbjct: 853 GECLRCIGNTDGAHCERCADGFY---GDAVTAKNCRACECHGKGSLSDICHPETGLCSCR 909
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
VTG++CD+C +Y GC C C+P+GS+ + +C +GQC
Sbjct: 910 ARVTGEQCDQCLHGYYGLDTGLGCLPCNCSPSGSLSD--DCTE-EGQCHCMP-------- 958
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC R Y GG C+ E G C C P
Sbjct: 959 -----------GVAGKRC---DRCARGFYAFQDGGCTPCDCADTQNTCDPESGECVCPPH 1004
Query: 190 VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +C+ C+ ++ + E GC++C C+ GS + C+ + G C+CK G C
Sbjct: 1005 TRGVRCEECEDGYWGYDLELGCQACNCSSEGSASH--RCEVLTGHCQCKPVFGGPSC 1059
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 70/142 (49%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + N+ GG C++C + G NCE C D YY+
Sbjct: 378 CNCHNKAKDCYYDESVANQKKSLNIAGQYRGGGVCINCLQNTMGINCETCIDGYYRPHKV 437
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
DN C C+C+P+GSL+ C + G+C CK G TG KCDRC +
Sbjct: 438 SPYEDNPCHPCDCDPVGSLSSVCIKDDLHSDLHRGTWPGQCPCKEGYTGAKCDRCQFGYK 497
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
G C C+C+PAGSV P
Sbjct: 498 --GYPACVRCDCSPAGSVNEDP 517
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG KCDRC + G C C+C+PAGSV P + C CK+NVE
Sbjct: 476 GQCPCKEGYTGAKCDRCQFGYK--GYPACVRCDCSPAGSVNEDPCSEP----CLCKENVE 529
Query: 242 GAQC 245
G C
Sbjct: 530 GKNC 533
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSE-GRCQCK 78
H C C +G CE+C Y+ G C C+C+ GS++ C+ G+C C+
Sbjct: 1328 HDFRCDACVLGYEGQYCERCSSGYHGNPGMPGGTCQRCDCSLHGSVHRDCDRRTGQCVCR 1387
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCE 105
PG G +C+ C+ H E+ C SC+
Sbjct: 1388 PGAAGLRCEECEPRHI-LVESNCVSCD 1413
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C+ Y G C C+C+P GS+N SE C CK V G CDR
Sbjct: 480 CKEGYTGAKCDRCQFGY---KGYPACVRCDCSPAGSVNEDPCSEP-CLCKENVEGKNCDR 535
Query: 89 CDVNHYDFGE---AGCKSCEC 106
C Y+ E GC +C C
Sbjct: 536 CRPGFYNLKERNPQGCSACFC 556
>gi|296230105|ref|XP_002760562.1| PREDICTED: usherin [Callithrix jacchus]
Length = 5203
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 129/265 (48%), Gaps = 29/265 (10%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--- 52
C CN S C ++ + + G GG C DC+ + G NCE C+D ++++ G +
Sbjct: 575 CQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGADPSA 634
Query: 53 --FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C +C+C+ +G+ N + C+ G +C CK V+G +C++C Y E GC C
Sbjct: 635 IDVCKSCDCDKVGTRNGSILCDQIGGQCNCKRHVSGRQCNQCQNGFYSLQELDPDGCSPC 694
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + + + ++F+ G C+
Sbjct: 695 NCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDRCDFGFKFLRSFNDDG-----CEPCQC 749
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS+N CN G+C+CK G +CD C N Y C +C+C+ AGS+
Sbjct: 750 NLH-----GSVNKFCNPLSGQCECKKEAKGLQCDTCRENFYGLDVTNCMACDCDTAGSLP 804
Query: 223 NTPNCDSVKGQCECKDNVEGAQCRS 247
T C++ GQC CK NV G QC +
Sbjct: 805 GT-VCNAKTGQCICKPNVGGRQCNT 828
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 111/226 (49%), Gaps = 20/226 (8%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + D+ C C CN GS+N CN G+C+CK G +
Sbjct: 717 CKANVIGLRCDRCDFGFKFLRSFNDDGCEPCQCNLHGSVNKFCNPLSGQCECKKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y C +C+C+ AGS+ T C++ GQC + +T L
Sbjct: 777 CDTCRENFYGLDVTNCMACDCDTAGSLPGT-VCNAKTGQCICKPNVGGRQCNTCL----E 831
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKCDRCDVNH 202
+NF N + C D G++N L CN S G+C CK GVTG +C++C+ +
Sbjct: 832 RNFYLRQNNSFLCLPCNCD-----KTGTINGSLLCNKSTGQCPCKLGVTGLRCNQCEPHR 886
Query: 203 YDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y+ C+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 887 YNLTIDNFQSCQMCECDSMGTLPGT-ICDPISGQCLCVPNRQGRRC 931
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 119/249 (47%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C C + N+Y + ++F C CNC+ G++N L CN S G+C CK
Sbjct: 813 GQCI-CKPNVGGRQCNTCLERNFYLRQNNSFLCLPCNCDKTGTINGSLLCNKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQSCQMCECDSMGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCHQCQPGFYISPGNASGCLPCSCHTAGAVNHICNS 965
Query: 181 -EGRCQCKPGVT-GDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ T G CD+C ++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASTAGQHCDQCKDRYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQSCQMCECDSMGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C +C Y +GC C C+ AG+V + C+S+ GQC S+ G+ H +
Sbjct: 930 RCHQCQPGFYISPGNASGCLPCSCHTAGAVNHI--CNSLTGQCVCQDASTAGQ-HCDQCK 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DRYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G +C++C+D Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCVCQDASTAGQHCDQCKDRYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1026 FVTGSKCDACVPSASHLD 1043
>gi|410898908|ref|XP_003962939.1| PREDICTED: laminin subunit beta-2-like [Takifugu rubripes]
Length = 1778
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 106/224 (47%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG SN C FD +Y +G+ GG C DCQ + G C+ C+ YY+ +
Sbjct: 329 CNCNGHSNICHFDMAVYLASGNISGGVCDDCQHNTMGYQCDMCKPFYYKDPAKDIRDPHV 388
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C AC+C+P GS N C+S G+C+CK V G +CD+C + G
Sbjct: 389 CVACDCDPDGSQNGGMCDSHTDTSLGLVGGQCRCKVNVDGPRCDKCKTGFFGLSADNPQG 448
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+C+ G+V CD V G C +L + L + D G R
Sbjct: 449 CQPCQCDRMGTVLGNSQCDPVSGDCFCKRLVTGRSCDKCLPEHWALSHDLNG-----CRA 503
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+L+ C+ E G+C+C+ +TG +C + D ++
Sbjct: 504 CDCDV-----GGALDNLCSKETGQCRCRSHMTGRQCSQVDSGYF 542
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSEGR 74
G C C + +GP C C+ Y+ + C C CN +G+ QC + G+
Sbjct: 985 GECRKCLYNSEGPTCGICKSGYFGDASQRNCRKCVCNFLGTDRSQCMDNEDCVCQRATGQ 1044
Query: 75 CQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
CQC V G CD C NH++ G GC+ C C+P SV ++ C+ GQC+
Sbjct: 1045 CQCLQNVIGLTCDHCAPNHWNLAGGRGCEPCGCDPNNSVSSS--CNEFTGQCQ 1095
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+P GS + C+ G +C C+P V G +CD+C Y FG +GC +C C+ GSV T
Sbjct: 766 CNCDPQGSSSSVCDVRGGQCHCRPNVIGRRCDQCAWGTYGFGPSGCTACGCSLEGSV--T 823
Query: 116 PNCDSVKGQCE 126
CD GQC+
Sbjct: 824 RLCDRYTGQCQ 834
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 105/267 (39%), Gaps = 43/267 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC- 59
C CNG ++ C RTG C+ C+ + G CE+C D YY C C C
Sbjct: 860 CQCNGHTDEC------DQRTGA---CIRCRDNTGGDKCERCADGYYGNPASGLCHPCPCP 910
Query: 60 ---NPIGSLNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNP 108
N C + + C C G G +C C ++ C+ C+CN
Sbjct: 911 DGPNSGRHFAATCYQDIQSRQIICNCNQGYIGARCGGCAPGYHGNPSQPSGRCQPCQCNN 970
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
+ + CD G+C +S G + F A R + R+C +
Sbjct: 971 NIDMTDMAACDRRTGECRKCLYNSEG---PTCGICKSGYFGDASQR--NCRKCVCNFL-- 1023
Query: 169 GHGGSLNLQC---------NSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPA 218
G+ QC + G+CQC V G CD C NH++ G GC+ C C+P
Sbjct: 1024 ---GTDRSQCMDNEDCVCQRATGQCQCLQNVIGLTCDHCAPNHWNLAGGRGCEPCGCDPN 1080
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
SV ++ C+ GQC+C+ G C
Sbjct: 1081 NSVSSS--CNEFTGQCQCRSGFGGKTC 1105
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C Y G + CTAC C+ GS+ C+ G+CQC PG
Sbjct: 782 GGQC-HCRPNVIGRRCDQCAWGTY-GFGPSGCTACGCSLEGSVTRLCDRYTGQCQCHPGA 839
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G CD C H+ F C+ C+CN +T CD G C
Sbjct: 840 FGRYCDACKAGHWGF--PTCRPCQCN-----GHTDECDQRTGAC 876
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G +CD+C + GC+ C+C+ G+V CD V G C CK
Sbjct: 418 GQCRCKVNVDGPRCDKCKTGFFGLSADNPQGCQPCQCDRMGTVLGNSQCDPVSGDCFCKR 477
Query: 239 NVEGAQC 245
V G C
Sbjct: 478 LVTGRSC 484
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S++ CN G+CQC+ G G C C+ N++ C++C+C+P G +T C+ V
Sbjct: 1082 SVSSSCNEFTGQCQCRSGFGGKTCTDCEENYWGDPRTQCRACDCDPRGI--DTTQCNRVT 1139
Query: 232 GQCECKDNVEGAQC 245
G C C V G +C
Sbjct: 1140 GHCVCLQGVSGVRC 1153
>gi|296222256|ref|XP_002757120.1| PREDICTED: laminin subunit alpha-1 [Callithrix jacchus]
Length = 3161
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 106/237 (44%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D ++ GD C AC C+ GS + C+ E G C CK
Sbjct: 953 GECLKCLGNTDGAHCERCADGFF---GDAVTAKNCRACECHEKGSHSAVCHLETGLCDCK 1009
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC+ C C+ AGSV + +C +GQC
Sbjct: 1010 PNVTGQQCDQCLRGYYGLDSGHGCQPCNCSTAGSVSD--DCTD-EGQCHCIP-------- 1058
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC R Y G C+ E G C C P
Sbjct: 1059 -----------GVAGKRC---DRCARGFYIYQDGSCTPCDCPHTQNTCDPETGACVCPPH 1104
Query: 190 VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ + E GC++C C+ GS + CD + G C+CK G C
Sbjct: 1105 TQGVKCEECEDGHWGYDLEVGCQACNCSLVGSTHH--QCDVLTGHCQCKSKFGGRAC 1159
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + + GG C++C + G NCE C D YY+
Sbjct: 412 CNCHNKAKDCYYDESVAKQKKSLDTAGQFRGGGVCINCLQNTMGINCETCIDGYYRPHKV 471
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C AC+C+P+GSL+ C + G+C CK G G+KCD C + +
Sbjct: 472 SPYEDEPCRACDCDPVGSLSSVCIKDDRHSDLHNGKWPGQCPCKEGYAGEKCDHCQLGYK 531
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
D+ C C CNP GS + P
Sbjct: 532 DY--PSCVPCGCNPVGSANDEP 551
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 106/227 (46%), Gaps = 28/227 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ + G C++C YY + C CNC+ GS++ C EG+C C PGV G +CD
Sbjct: 1007 DCKPNVTGQQCDQCLRGYYGLDSGHGCQPCNCSTAGSVSDDCTDEGQCHCIPGVAGKRCD 1066
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y + + C C+C +NT CD G C HT+ V+ +
Sbjct: 1067 RCARGFYIYQDGSCTPCDCP---HTQNT--CDPETGACVCPP-------HTQ-GVKCEEC 1113
Query: 148 FDPAGNRIWDLRR-CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF 205
D G+ +DL C+ L GS + QC+ G CQCK G C++C + + F
Sbjct: 1114 ED--GHWGYDLEVGCQACNCSLV--GSTHHQCDVLTGHCQCKSKFGGRACNQCSLGYRGF 1169
Query: 206 GEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
+ C C+C+ G+ +T N C G C CK+NV G QC
Sbjct: 1170 PD--CVPCDCDLRGTSGDTCNLEQGLCSCAKETGACSCKENVFGPQC 1214
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCTACNCNPIGSLN-------LQCNS 71
G C+ C + G +CE+C +Y + GD C C C + N L
Sbjct: 840 GVCIACAHNTTGDHCERCLPGFYGEPSRGTPGD--CQPCACPLTMATNNFSPTCHLNDGD 897
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSC-ECNPAGSV--KNTPNCDSVKGQCES 127
E C QC PG +G C+RC +Y A KSC C+ +G+V K +CDSV G+C
Sbjct: 898 EVVCDQCAPGYSGAWCERCADGYYGNPTAPGKSCVPCDCSGNVDPKEAGHCDSVTGECLK 957
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ GS + C+ E G C C
Sbjct: 958 CLGNTDG-AHCE---RCADGFFGDAVTAKNCRACE-----CHEKGSHSAVCHLETGLCDC 1008
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KP VTG +CD+C +Y GC+ C C+ AGSV + +C +GQC C V G +C
Sbjct: 1009 KPNVTGQQCDQCLRGYYGLDSGHGCQPCNCSTAGSVSD--DCTD-EGQCHCIPGVAGKRC 1065
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNC--NPIGSLNLQCNSEGRC---- 75
G CL+C + G +C+ C YY K N C C C +P S + C EG
Sbjct: 1502 GKCLNCSDNTAGDHCDVCASGYYGKVTGSANDCALCACPHSPPASFSPTCVLEGDHDFHC 1561
Query: 76 -QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C PG G C+RC + +Y + C+ C+CNP GSV CD GQC
Sbjct: 1562 DACLPGYEGQLCERCSLGYYGNPQTPGGSCQKCDCNPHGSVHG--ECDRTSGQC 1613
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H HC C +G CE+C YY Q G + C C+CNP GS++ +C+ + G+C C
Sbjct: 1557 HDFHCDACLPGYEGQLCERCSLGYYGNPQTPGGS-CQKCDCNPHGSVHGECDRTSGQCVC 1615
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ G +G +CD C+ H E C SC+
Sbjct: 1616 RLGASGLRCDECEPRHI-LVETACVSCD 1642
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G+KCD C + + D+ C C CNP GS + P G C CK+NVE
Sbjct: 510 GQCPCKEGYAGEKCDHCQLGYKDY--PSCVPCGCNPVGSANDEP----CTGPCLCKENVE 563
Query: 242 GAQC 245
G C
Sbjct: 564 GKAC 567
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C PG G C+RC + +Y + C+ C+CNP GSV CD GQC C+ G
Sbjct: 1564 CLPGYEGQLCERCSLGYYGNPQTPGGSCQKCDCNPHGSVHG--ECDRTSGQCVCRLGASG 1621
Query: 243 AQC 245
+C
Sbjct: 1622 LRC 1624
>gi|340715997|ref|XP_003396491.1| PREDICTED: laminin subunit alpha-like [Bombus terrestris]
Length = 3666
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 105/238 (44%), Gaps = 48/238 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C++C YY C CNC+ GS+ C++EG+CQC+ G +C +
Sbjct: 603 CLANFAGRTCDQCSPGYYMYPE---CIPCNCDSHGSIGASCDAEGKCQCRENFDGGRCSQ 659
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQS 144
C Y+F C+ C C+PAG V+ C S+ QC + RV + Q
Sbjct: 660 CKEGFYNF--PTCEGCNCDPAGVVETFQGCGSLPAGELCQC-------KDRVEGRICNQC 710
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------------SEGRCQCKPGVT 191
+ + W+L+ P G QCN G+C CKPGVT
Sbjct: 711 KPLY-------WNLQ-------PYNPQGCEECQCNIPGVIGNIGECDTKNGQCICKPGVT 756
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C++C Y+ E+ GC C C+ GSV + CD + GQC+C+ V G C+
Sbjct: 757 DRSCNQCVDGTYNLQESNFFGCTDCACDIGGSVNSV--CDKLTGQCQCQPRVTGLTCK 812
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C C D YY CT CNC+ G+ C+ ++G C CK G G +CD
Sbjct: 512 CKNNYGGRTCNICEDGYYNYPE---CTFCNCDARGTEPGVCDKTDGWCLCKKGYGGPRCD 568
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C +N Y +G C+ C C+ GS ++ +CD+V G+C S + GR +
Sbjct: 569 QC-INGY-YGFPNCRPCNCSLTGS--SSISCDAV-GKC-SCLANFAGRTCDQC------- 615
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P + C D++ GS+ C++EG+CQC+ G +C +C Y+F
Sbjct: 616 -SPGYYMYPECIPCNCDSH-----GSIGASCDAEGKCQCRENFDGGRCSQCKEGFYNF-- 667
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQC 245
C+ C C+PAG V+ C S+ C+CKD VEG C
Sbjct: 668 PTCEGCNCDPAGVVETFQGCGSLPAGELCQCKDRVEGRIC 707
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ GP C++C + YY G C CNC+ GS ++ C++ G+C C G
Sbjct: 554 GWCL-CKKGYGGPRCDQCINGYY---GFPNCRPCNCSLTGSSSISCDAVGKCSCLANFAG 609
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
CD+C +Y + E C C C+ GS+ + CD+ +G+C+ + GR Q
Sbjct: 610 RTCDQCSPGYYMYPE--CIPCNCDSHGSIGAS--CDA-EGKCQCRENFDGGRCS-----Q 659
Query: 144 SRKNF-----------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
++ F DPAG + + C + P G CQCK V G
Sbjct: 660 CKEGFYNFPTCEGCNCDPAG-VVETFQGC--GSLPAGE------------LCQCKDRVEG 704
Query: 193 DKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C++C +++ + GC+ C+CN G + N CD+ GQC CK V C
Sbjct: 705 RICNQCKPLYWNLQPYNPQGCEECQCNIPGVIGNIGECDTKNGQCICKPGVTDRSC 760
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
+ G C C + G C+ C D++Y C AC+C I S + QC+ + G+C+CKPG
Sbjct: 1964 YTGQCY-CHENVVGEQCDHCADDHYGYDTCEGCKACDCG-IASESSQCDDATGQCRCKPG 2021
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C ++++G GC SCECN SV + C++ GQC
Sbjct: 2022 VTGRRCDQCISGYWNYGPEGCTSCECNIGYSVGVS--CNATTGQC 2064
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C C P V G++CD+C+V Y F GC+ C C+P G + CD + G C+CK+NV
Sbjct: 1422 GACSCPPRVIGERCDQCEVGTYGFHPIVGCEECNCSPLGVIDGDLQCDFLNGNCKCKENV 1481
Query: 241 EGAQC 245
G QC
Sbjct: 1482 VGRQC 1486
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 179 NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
++ G+C+CKPGVTG +CD+C ++++G GC SCECN SV + C++ GQC C
Sbjct: 2011 DATGQCRCKPGVTGRRCDQCISGYWNYGPEGCTSCECNIGYSVGVS--CNATTGQCSCLP 2068
Query: 239 NVEGAQC 245
V G +C
Sbjct: 2069 GVIGEKC 2075
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 41 CRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
CRD+ + + + N CNCN GS++L+C G +C CK + G +C+ C Y F
Sbjct: 1345 CRDSIFSLTANYNNRALPCNCNINGSISLECEKFGGQCPCKANIIGRRCEICKTGFYGF- 1403
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ---SRKNFDPAGNR 154
CK C C +T C+ G C S RV E Q F P
Sbjct: 1404 -PNCKPCSC------PSTALCEPETGAC-----SCPPRVIGERCDQCEVGTYGFHP---- 1447
Query: 155 IWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 212
+ C+ + PLG +LQC+ G C+CK V G +CD+C + F C+
Sbjct: 1448 ---IVGCEECNCSPLGVIDG-DLQCDFLNGNCKCKENVVGRQCDKCRSGYSQFPH--CEK 1501
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+C+ G+ N CD +C CK+NV+G C
Sbjct: 1502 CDCDIRGTTANI--CDQYTAECFCKENVQGLAC 1532
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 108/261 (41%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C D E G CLDC+ G +CE C+ YY + C C
Sbjct: 1790 CECNGHADTC--DVE-------TGICLDCKDGTTGDHCELCKQGYYGNATGGTPTDCLIC 1840
Query: 58 NCN-PIGSLNL----QCNSEG---RCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCEC 106
C P S N + N EG C C G G +C+ C Y E CK C+C
Sbjct: 1841 ACPLPFPSNNFATGCEVNEEGNKISCDCLAGYYGARCESCVSGFYGNPEVYGDYCKPCKC 1900
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ +CDS G+C ++ G + + F A R D R C
Sbjct: 1901 SGNIDTNQVGSCDSRTGECLRCLNNTYGEA---CNLCAPGFFGDAVER-KDCRTCSCKEC 1956
Query: 167 PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT 224
+ H C+S G+C C V G++CD C +HY + GCK+C+C G +
Sbjct: 1957 GMKH-------CDSYTGQCYCHENVVGEQCDHCADDHYGYDTCEGCKACDC---GIASES 2006
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQC CK V G +C
Sbjct: 2007 SQCDDATGQCRCKPGVTGRRC 2027
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 111/263 (42%), Gaps = 43/263 (16%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC G S+ C +D E ++ GG C +C+ + +G NC +C+ +Y+
Sbjct: 330 CNCFGHSDECEYDTEVDEKHLSLDIHGNYEGGGVCKNCRDNTEGINCNRCKPMFYRPRNK 389
Query: 49 --SGDNFCTACNCNPIGSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
+ + C C CN NL N + G+C+C+ T CD C +Y G C
Sbjct: 390 PLNATDVCQPCQCN---GFNLTGNCADATGKCECRKEYTSPNCDSCSYGYY--GYPNCVP 444
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+C G+ + +C ++ G C S+ + L Q F + C+
Sbjct: 445 CQCYSNGT--HGDHCKAIDGSCPCK--SNYAGHYCNLCAQGYYKFP-------ECLPCEC 493
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
++ GSLN C+ G C CK G C+ C+ +Y++ E C C C+ G+
Sbjct: 494 NSL-----GSLNDNCDVISGNCTCKNNYGGRTCNICEDGYYNYPE--CTFCNCDARGTEP 546
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
CD G C CK G +C
Sbjct: 547 GV--CDKTDGWCLCKKGYGGPRC 567
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
GG C C+ + G CE C+ +Y G C C+C P +L C E G C C P
Sbjct: 1378 FGGQC-PCKANIIGRRCEICKTGFY---GFPNCKPCSC-PSTAL---CEPETGACSCPPR 1429
Query: 81 VTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCE 126
V G++CD+C+V Y F GC+ C C+P G + CD + G C+
Sbjct: 1430 VIGERCDQCEVGTYGFHPIVGCEECNCSPLGVIDGDLQCDFLNGNCK 1476
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 21/195 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G CL C + G C C ++ + + C C+C G C+S G+C C V
Sbjct: 1917 GECLRCLNNTYGEACNLCAPGFFGDAVERKDCRTCSCKECGMK--HCDSYTGQCYCHENV 1974
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G++CD C +HY + GCK+C+C G + CD GQC + GR +
Sbjct: 1975 VGEQCDHCADDHYGYDTCEGCKACDC---GIASESSQCDDATGQCR-CKPGVTGR-RCDQ 2029
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCD 199
+ N+ P G C+ + G S+ + CN + G+C C PGV G+KCD C
Sbjct: 2030 CISGYWNYGPEG-----CTSCECNI-----GYSVGVSCNATTGQCSCLPGVIGEKCDHCP 2079
Query: 200 VNHYDFGEAGCKSCE 214
+ GC +C+
Sbjct: 2080 YRNVLIPGQGCFACD 2094
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL-----QCNSEGRCQCKPGV 81
C+ + DG C +C++ +Y NF C CNC+P G + + CQCK V
Sbjct: 648 CRENFDGGRCSQCKEGFY-----NFPTCEGCNCDPAGVVETFQGCGSLPAGELCQCKDRV 702
Query: 82 TGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G C++C +++ + GC+ C+CN G + N CD+ GQC + G
Sbjct: 703 EGRICNQCKPLYWNLQPYNPQGCEECQCNIPGVIGNIGECDTKNGQC----ICKPGVTDR 758
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
++ + + C D GGS+N C+ G+CQC+P VTG C
Sbjct: 759 SCNQCVDGTYNLQESNFFGCTDCACDI-----GGSVNSVCDKLTGQCQCQPRVTGLTCKE 813
Query: 198 CDVNHY 203
HY
Sbjct: 814 PLKAHY 819
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 103/266 (38%), Gaps = 70/266 (26%)
Query: 17 YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-KSGDN--FCTACNCNPIGSLNLQCNSE- 72
YN G C + +G +CE+C YY+ SG + +C C CN C+ E
Sbjct: 1747 YNVPASGVEQCQCPPNYEGLSCEECAPGYYRVDSGPHGGYCVGCECNGHAD---TCDVET 1803
Query: 73 GRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKS-------------------CECNPAGSV 112
G C CK G TGD C+ C +Y G + CE N G
Sbjct: 1804 GICLDCKDGTTGDHCELCKQGYYGNATGGTPTDCLICACPLPFPSNNFATGCEVNEEG-- 1861
Query: 113 KNTPNCDSVKG----QCES--AQLSSRGRVHTEL----RVQSRKNFDPAG---NRIWDLR 159
N +CD + G +CES + V+ + + + + G +R +
Sbjct: 1862 -NKISCDCLAGYYGARCESCVSGFYGNPEVYGDYCKPCKCSGNIDTNQVGSCDSRTGECL 1920
Query: 160 RCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
RC +TY G + NL C PG GD +R D C++C C G
Sbjct: 1921 RCLNNTY----GEACNL---------CAPGFFGDAVERKD----------CRTCSCKECG 1957
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+CDS GQC C +NV G QC
Sbjct: 1958 ----MKHCDSYTGQCYCHENVVGEQC 1979
>gi|426357539|ref|XP_004046095.1| PREDICTED: laminin subunit beta-4 [Gorilla gorilla gorilla]
Length = 1761
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNPLGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGHSC 536
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 111/271 (40%), Gaps = 49/271 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNGF+ C D E G C +C G G NCE+C D YY
Sbjct: 863 CPCNGFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 47 ---QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAG 100
S F +C NP +SE C C G TG +C C Y A
Sbjct: 914 PDDPSSNQYFAHSCYQNP-------WSSEVICNCLQGYTGTQCGECSTGFYGNPRISGAP 966
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C CN V + +C V G+C +++G T ++ ++ A N+ RR
Sbjct: 967 CRPCACNNNIDVTDPESCSWVTGECLRCLHNTQG---TNCQLCKPGHYGSALNQT--CRR 1021
Query: 161 CK---RDTYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCE 214
C P+ GG L G C C P VTG CDRC +++ GC+SC+
Sbjct: 1022 CSCHASGVSPMECPPGGGACLCDPVTGACPCLPNVTGLVCDRCADGYWNLVPGRGCQSCD 1081
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+P S + +CD + GQC CK G C
Sbjct: 1082 CDPRTS--QSSHCDQLTGQCPCKLGYGGKHC 1110
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 108/278 (38%), Gaps = 87/278 (31%)
Query: 1 CNCNGFSNRCFFDKEL----YNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C +++ ++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECRPMQKMRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S L S G C+ C+ G CDRC Y
Sbjct: 323 DLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S + DPA
Sbjct: 383 LKTISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 415
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY
Sbjct: 416 LGSV-------------------------AGQCLCKENVEGAKCDQCKPNHYGLSATDPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GC+ C+CNP GS+ CD GQC C V GA C
Sbjct: 451 GCQPCDCNPLGSLPFL-TCDVDTGQCLCLSYVTGAHCE 487
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 89/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G ++C G
Sbjct: 989 GECLRCLHNTQGTNCQLCKPGHYGSALNQTCRRCSCHASGVSPMECPPGGGACLCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPNVTGLVCDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -HCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCHCREGVSGQRC 1158
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 23 GGHCL--------DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EG 73
GG CL C + G C++C D Y+ C +C+C+P S + C+ G
Sbjct: 1038 GGACLCDPVTGACPCLPNVTGLVCDRCADGYWNLVPGRGCQSCDCDPRTSQSSHCDQLTG 1097
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+C CK G G C C N+Y C C+CN AG+ K P CD G C
Sbjct: 1098 QCPCKLGYGGKHCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMC 1147
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCKP V G CDRC YD
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCHCHPQGSKDTV--CDQVTGQC 836
>gi|444526052|gb|ELV14261.1| Laminin subunit beta-4 [Tupaia chinensis]
Length = 971
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 114/250 (45%), Gaps = 33/250 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG S+RC FD +Y +G GG C DC+ + +G +C++CR +Y+ S
Sbjct: 192 CTCNGHSDRCHFDPTVYLASGDLSGGVCEDCRHNTEGQHCDRCRPLFYRNPLKAISDPYA 251
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G CDRC +HY A G
Sbjct: 252 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGASCDRCKPHHYGLSAADPVG 311
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+C+P GS+ + CD GQC Q + G E V + GN + +
Sbjct: 312 CQPCDCHPLGSLPFS-TCDMDTGQC-LCQAYATGPHCKECAV----GYWGLGNHLQECSP 365
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
C D GG+ + C+ E G+C+C+P +TG C ++ F E A
Sbjct: 366 CDCDI-----GGAYSNMCSPEDGQCECRPHITGRSCTEPAPGYF-FAPLNFYLYEAEEAT 419
Query: 220 SVKNTPNCDS 229
++ DS
Sbjct: 420 PLQGLAPLDS 429
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 17/230 (7%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPG 80
G CL CQ GP+C++C Y+ G++ C+ C+C+ G+ + C+ E G+C+C+P
Sbjct: 333 GQCL-CQAYATGPHCKECAVGYW-GLGNHLQECSPCDCDIGGAYSNMCSPEDGQCECRPH 390
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTE 139
+TG C ++ F E A ++ DS GQ + + +
Sbjct: 391 ITGRSCTEPAPGYF-FAPLNFYLYEAEEATPLQGLAPLDSASFGQVSGVHIVFQEPIPGN 449
Query: 140 LRVQSRKNFDP----AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+ + F AG R +P+ ++ + G+C C+ G G +C
Sbjct: 450 PITWTGRGFARVLPGAGLRF----TVNNIPFPMNFAIAVRYEIQFTGQCPCRLGYGGLRC 505
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ +HY C SC CN G+ K+ CD G C C++ V G QC
Sbjct: 506 SECEASHYGDRLGRCISCNCNREGTQKSV--CDPDTGMCHCREGVSGQQC 553
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 108/278 (38%), Gaps = 87/278 (31%)
Query: 1 CNCNGFSNRCFFDKEL----YNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C +E+ ++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 125 CFCNGHASECGPAQEVRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWKPAV 182
Query: 51 ---DNFCTACNCN---------PIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
D+ C +C CN P L S G C+ C+ G CDRC Y
Sbjct: 183 GPQDSTCRSCTCNGHSDRCHFDPTVYLASGDLSGGVCEDCRHNTEGQHCDRCRPLFYRNP 242
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S + DPA
Sbjct: 243 LKAISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 275
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G CDRC +HY A
Sbjct: 276 LGSV-------------------------AGQCLCKENVEGASCDRCKPHHYGLSAADPV 310
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GC+ C+C+P GS+ + CD GQC C+ G C+
Sbjct: 311 GCQPCDCHPLGSLPFS-TCDMDTGQCLCQAYATGPHCK 347
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 35 GPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 91
G C +C ++Y GD C +CNCN G+ C+ + G C C+ GV+G +CDRC
Sbjct: 502 GLRCSECEASHY---GDRLGRCISCNCNREGTQKSVCDPDTGMCHCREGVSGQQCDRCTR 558
Query: 92 NH 93
H
Sbjct: 559 GH 560
>gi|313221742|emb|CBY38837.1| unnamed protein product [Oikopleura dioica]
Length = 1258
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 102/225 (45%), Gaps = 32/225 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C G + C FD ++Y T GG C C+ + +G CE+C + YYQ N
Sbjct: 336 CECYGHATECHFDPDVYEATDSTSGGVCEQCKHNTEGRMCERCIEGYYQDPLKNINDPEI 395
Query: 54 CTACNCNPIGSLNL---------QCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGC 101
C C+C P G + GRC+CK V G++CD+C + GC
Sbjct: 396 CVLCDCEPAGVVGACDRATIPGPDGTVAGRCRCKANVMGERCDQCKPGFHSLDPNNPNGC 455
Query: 102 KSCECNPAGSV-KNTPNCDSVKGQCESAQLSSRGRVHT-ELRVQSRKNFDPAGNRIWDLR 159
C+C+ GSV + CD + GQC + GR T + D G +
Sbjct: 456 SPCDCDDRGSVMRGGSICDPLNGQCHCKSNVTGGRCDTCAPHTYGLSSGDADG-----CK 510
Query: 160 RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
+C+ D GGSLN CN+ +G+C C+P +TG +C+ +H+
Sbjct: 511 KCRCDI-----GGSLNQNCNTVDGKCICRPNITGQRCNDVKEDHF 550
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 109/285 (38%), Gaps = 52/285 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG +N C G CL C D G NCE+C D YY
Sbjct: 880 CECNGHANEC---------DSVSGECLSCAHDTTGANCERCADGYYGDPTSVTNSQCTPC 930
Query: 47 -----QKSGDNFCTACNCNPI-GSLNLQCNSEG------RCQCKPGVTGDKCDRCDVNHY 94
KS F C + + GS + + ++ G C C PG G +CD+C H+
Sbjct: 931 PCPDGPKSNRQFADTCGLSRMRGSSSREDDARGPRPSMVMCNCNPGYQGLQCDQCAPGHF 990
Query: 95 -----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD 149
FG C CECN + CD+ G+C + G +E + +
Sbjct: 991 GNPMEPFGS--CNPCECNGNIDTSDPDACDARTGECLKCLYNRGGDDCSECADGYYEQPN 1048
Query: 150 PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA 208
G + C D G + C+ + G+C C V G C C N +D A
Sbjct: 1049 ADGTD-FTCVPCGCDER--GGDPFIGNTCDKKTGQCACLDKVEGRTCSSCRNNFFDLANA 1105
Query: 209 ----GCKSCECNPAGS--VKNTPNCDSVKGQCECKDNVEGAQCRS 247
GC++C C+P S + CD V GQC CK G C+S
Sbjct: 1106 VENGGCQACGCDPENSEDISGEQPCDMVTGQCRCKPGFGGRDCKS 1150
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS++ C+ S G+C+C+ GVTG C++C + F GC+ C+CN G+V C+
Sbjct: 790 GSISRSCDPSGGQCECREGVTGRTCNQCAAGFFGFSHTGCQMCDCNRRGTVNQGQFCEQQ 849
Query: 231 KGQCECKDNVEGAQC 245
GQC+C + V G QC
Sbjct: 850 SGQCQCLEGVGGRQC 864
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 81/192 (42%), Gaps = 27/192 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS---GDNF-CTACNCNPIGSLNLQCNS----EGRC 75
G CL C +R G +C +C D YY++ G +F C C C+ G N+ G+C
Sbjct: 1022 GECLKCLYNRGGDDCSECADGYYEQPNADGTDFTCVPCGCDERGGDPFIGNTCDKKTGQC 1081
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGS--VKNTPNCDSVKGQCE-SA 128
C V G C C N +D A GC++C C+P S + CD V GQC
Sbjct: 1082 ACLDKVEGRTCSSCRNNFFDLANAVENGGCQACGCDPENSEDISGEQPCDMVTGQCRCKP 1141
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
R E DP +I C D G CN+ G+C+CK
Sbjct: 1142 GFGGRDCKSCEQGYYG----DP---KIGKCEACDCDP----SGVHDPFACNAWTGQCECK 1190
Query: 188 PGVTGDKCDRCD 199
PG+ G CDRC+
Sbjct: 1191 PGIGGQHCDRCE 1202
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 56 ACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+C C+ GS++ C+ S G+C+C+ GVTG C++C + F GC+ C+CN G+V
Sbjct: 783 SCECDQTGSISRSCDPSGGQCECREGVTGRTCNQCAAGFFGFSHTGCQMCDCNRRGTVNQ 842
Query: 115 TPNCDSVKGQCE 126
C+ GQC+
Sbjct: 843 GQFCEQQSGQCQ 854
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 71/168 (42%), Gaps = 19/168 (11%)
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
GV CD + + G KSCEC+ GS+ + CD GQCE + GR +
Sbjct: 760 GVIEKDCDAMTYSISSWFHQGAKSCECDQTGSISRS--CDPSGGQCECRE-GVTGRTCNQ 816
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
F G ++ D R R T G G+CQC GV G +CDRC
Sbjct: 817 C-AAGFFGFSHTGCQMCDCNR--RGTVNQGQFCE-----QQSGQCQCLEGVGGRQCDRCL 868
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
YDF CK CECN + CDSV G+C C + GA C
Sbjct: 869 PGFYDF--PNCKKCECN-----GHANECDSVSGECLSCAHDTTGANCE 909
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 98/243 (40%), Gaps = 49/243 (20%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE---GRCQCKP 79
GG C +C+ G C +C ++ S C C+CN G++N E G+CQC
Sbjct: 800 GGQC-ECREGVTGRTCNQCAAGFFGFSHTG-CQMCDCNRRGTVNQGQFCEQQSGQCQCLE 857
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR---- 135
GV G +CDRC YDF CK CECN + CDSV G+C S + G
Sbjct: 858 GVGGRQCDRCLPGFYDF--PNCKKCECN-----GHANECDSVSGECLSCAHDTTGANCER 910
Query: 136 -----VHTELRVQSRK------NFDPAGNRIWD----LRRCK----RDTYPLGHGGSLNL 176
V + + P NR + L R + R+ G S+ +
Sbjct: 911 CADGYYGDPTSVTNSQCTPCPCPDGPKSNRQFADTCGLSRMRGSSSREDDARGPRPSMVM 970
Query: 177 QCNSEGRCQCKPGVTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVKNTPNCDSVK 231
C C PG G +CD+C H+ FG C CECN + CD+
Sbjct: 971 -------CNCNPGYQGLQCDQCAPGHFGNPMEPFGS--CNPCECNGNIDTSDPDACDART 1021
Query: 232 GQC 234
G+C
Sbjct: 1022 GEC 1024
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C+CKPG G C C+ +Y + G C++C+C+P+G V + C++ GQCECK +
Sbjct: 1135 GQCRCKPGFGGRDCKSCEQGYYGDPKIGKCEACDCDPSG-VHDPFACNAWTGQCECKPGI 1193
Query: 241 EGAQC 245
G C
Sbjct: 1194 GGQHC 1198
>gi|327262517|ref|XP_003216070.1| PREDICTED: LOW QUALITY PROTEIN: Usherin-like [Anolis carolinensis]
Length = 5205
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 123/273 (45%), Gaps = 49/273 (17%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-----SG 50
C C G + C +++ + + G GG C DCQ + G NCE C+D +++ S
Sbjct: 576 CQCYGHATSCHYNRTMDSFPNEHYRGGGGVCDDCQHNTTGRNCELCKDFFFRHIDADLSA 635
Query: 51 DNFCTACNCNPIGSLN---LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C C CN +G++N L G+C CK V+G +C++C Y+ ++ GC C
Sbjct: 636 VDVCKPCECNTVGTINSNQLCDKIGGQCNCKRHVSGKQCNQCQKGFYNLQQSAPDGCSPC 695
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK----NFDPAGNRIWDLRR 160
CN +G+V C GQC+ + V K NF G + L
Sbjct: 696 NCNTSGTVDGDITCHQNSGQCKCKE-----------NVIGLKCEHCNF---GYK--HLLN 739
Query: 161 CKRDTYPLG-------HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 212
K+D G GS+N CN S G+C CK V G CD C Y GCK+
Sbjct: 740 MKKD----GCVHCQCNIHGSVNGFCNPSTGQCTCKKDVGGLYCDTCTDGFYGLDPFGCKT 795
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+C+ GS+ T C+ GQC CK N QC
Sbjct: 796 CDCHIGGSIAGT-ACNPKTGQCVCKPNFGERQC 827
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 101/232 (43%), Gaps = 49/232 (21%)
Query: 38 CEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCKPGVTGDKCDRCDVN 92
C C D YY Q + C CNC+ G++N + C+ S G+C CK V G +C +C +
Sbjct: 827 CIDCLDGYYRVQLNDSLACMPCNCDKTGTVNGSVLCDKSTGQCHCKASVIGLQCSQCMPH 886
Query: 93 HYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD 149
Y+ GC C C+P G++ T CD + G+C R H
Sbjct: 887 MYNLTAQNLLGCDICNCDPLGTLPGT-FCDQINGKCVCLPRRQGRRCH------------ 933
Query: 150 PAGNRIWDLRRCKRDTYPLGHG------------GSLNLQCNSE-GRCQCK-PGVTGDKC 195
+CK Y H GS + CNS G+C C+ V G +C
Sbjct: 934 ----------QCKPGFYFSQHSVDGCSPCLCHPTGSADELCNSHTGQCICQDYSVAGKRC 983
Query: 196 DRCDVNHYDF-GEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D C +Y F E G C+ C C+PAG++ T C + GQC CK G++C
Sbjct: 984 DHCRDYYYGFDAEKGRCQPCNCHPAGAINGT--CHPMTGQCMCKQFATGSKC 1033
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 110/237 (46%), Gaps = 30/237 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCNS-EGRCQC 77
GG C +C+ G C +C+ +Y Q+S + C+ CNCN G+++ + C+ G+C+C
Sbjct: 660 GGQC-NCKRHVSGKQCNQCQKGFYNLQQSAPDGCSPCNCNTSGTVDGDITCHQNSGQCKC 718
Query: 78 KPGVTGDKCDRCDVNH---YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G KC+ C+ + + + GC C+CN GSV C+ GQC + G
Sbjct: 719 KENVIGLKCEHCNFGYKHLLNMKKDGCVHCQCNIHGSVNGF--CNPSTGQCTCKK--DVG 774
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLN-LQCNSE-GRCQCKPGVT 191
++ + DP G CK D + GGS+ CN + G+C CKP
Sbjct: 775 GLYCDTCTDGFYGLDPFG--------CKTCDCH---IGGSIAGTACNPKTGQCVCKPNFG 823
Query: 192 GDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C +Y C C C+ G+V + CD GQC CK +V G QC
Sbjct: 824 ERQCIDCLDGYYRVQLNDSLACMPCNCDKTGTVNGSVLCDKSTGQCHCKASVIGLQC 880
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 92/213 (43%), Gaps = 32/213 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN----LQCNSEGRCQCKPGVT 82
C+ G C +C + Y + N C CNC+P+G+L Q N G+C C P
Sbjct: 871 CKASVIGLQCSQCMPHMYNLTAQNLLGCDICNCDPLGTLPGTFCDQIN--GKCVCLPRRQ 928
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G +C +C Y F + GC C C+P GS C+S GQC S G+
Sbjct: 929 GRRCHQCKPGFY-FSQHSVDGCSPCLCHPTGSADEL--CNSHTGQCICQDYSVAGKRCDH 985
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
R FD R C+ + +P G++N C+ G+C CK TG KCD
Sbjct: 986 CR-DYYYGFDAEKGR------CQPCNCHP---AGAINGTCHPMTGQCMCKQFATGSKCDD 1035
Query: 198 CDVN------HYDFGEAGCKSCECNPAGSVKNT 224
C ++ H FG + S + PAG V N+
Sbjct: 1036 CVLDASNLDVHNLFGCSKIPSQQPPPAGQVLNS 1068
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-FCTACNCNPIGSLNLQCNS-EGRCQCKP 79
H G C+ G C+ CRD YY + C CNC+P G++N C+ G+C CK
Sbjct: 967 HTGQCICQDYSVAGKRCDHCRDYYYGFDAEKGRCQPCNCHPAGAINGTCHPMTGQCMCKQ 1026
Query: 80 GVTGDKCDRCDVN------HYDFGEAGCKSCECNPAGSVKNT 115
TG KCD C ++ H FG + S + PAG V N+
Sbjct: 1027 FATGSKCDDCVLDASNLDVHNLFGCSKIPSQQPPPAGQVLNS 1068
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK V+G +C++C Y+ ++ GC C CN +G+V C GQC+CK+
Sbjct: 661 GQCNCKRHVSGKQCNQCQKGFYNLQQSAPDGCSPCNCNTSGTVDGDITCHQNSGQCKCKE 720
Query: 239 NVEGAQCR 246
NV G +C
Sbjct: 721 NVIGLKCE 728
>gi|443691509|gb|ELT93339.1| hypothetical protein CAPTEDRAFT_157479 [Capitella teleta]
Length = 3664
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 112/238 (47%), Gaps = 32/238 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C+ C + G CE C YY+ C ACNC+P G+ C+ E G+C C+P
Sbjct: 613 GQCV-CNYNYAGKLCESCAPGYYKYPE---CLACNCDPYGAYGSSCDQEFGQCDCRPTFE 668
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV-HTELR 141
G C++C N Y++ C+ C CNPAG+ K P G C + S GR+ + R
Sbjct: 669 GLMCEKCKANFYNY--PICEECNCNPAGA-KQVPGYP--LGGCGA---SDDGRLCECKDR 720
Query: 142 VQSRK---------NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
V R N +P N + C Y G G+ ++ ++G+C CKP V+G
Sbjct: 721 VSGRICDTCLAGYWNLNP--NNPFGCEDCA--CYTPGTVGTSHVCDVNQGQCFCKPYVSG 776
Query: 193 DKCDRC---DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
CD C N ++ GC C+C+P GSV NCD GQC C+ V G C S
Sbjct: 777 RSCDTCVDGTYNLMEYSPFGCIDCKCDPGGSVDT--NCDKDSGQCTCRPRVNGRTCSS 832
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 109/253 (43%), Gaps = 48/253 (18%)
Query: 16 LYNRTGHGGHCLDCQG-DRDGPNCEKC--RDNYYQKSGDNFC---------------TAC 57
L + LD QG D+ G KC D Y S FC C
Sbjct: 1327 LVSADSFSSKMLDVQGVDKSGEFIAKCGYDDFYIDHSTSGFCRDAVYSLTTFYNNGALQC 1386
Query: 58 NCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
NCNP GS++ C G +C+C+P + G C C ++ F + C+ C C P+G
Sbjct: 1387 NCNPDGSVSFSCEEFGGQCRCRPNIIGRTCSECQTGYFGFPD--CRPCNC-PSGL----- 1438
Query: 117 NCDSVKGQCESAQLSSRGRVHTE---LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
CD GQC RV E + +DP C + + G
Sbjct: 1439 -CDPQSGQCVCPP-----RVTGENCDSCLPRTFGYDP----FIGCEECGCSPFGVQQG-- 1486
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
+ CN + G+C CKP V G +CD+C+ HY + GC C C+P+GS+ CD
Sbjct: 1487 -IMDCNVDDGQCSCKPNVAGRRCDQCEAGHYSY--PGCYPCSCDPSGSLPMI--CDQDTS 1541
Query: 233 QCECKDNVEGAQC 245
+C C++NVEG+QC
Sbjct: 1542 ECLCRENVEGSQC 1554
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 109/265 (41%), Gaps = 43/265 (16%)
Query: 1 CNCNGFSNRCFFDK---------ELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
C C G ++ C +D+ +++ GG C +C+ + G NCEKCR Y+ G
Sbjct: 344 CQCYGHTDECIYDEGVAANFTSIDIHGNYEGGGVCQNCRDNTMGVNCEKCRPGYFHPYGV 403
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C C+P S G C CKP TG C+ C + +D+ C+ CEC
Sbjct: 404 LLNATDACQECECDPFFSTGECDGGSGECYCKPEFTGRSCEECAIGFFDWPR--CRPCEC 461
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR--- 163
N G+ C G+C + + G N D + CKR
Sbjct: 462 NVNGTQNQV--CQVGGGEC-PCKPNYEG-----------TNCDQCAYGYYGFPDCKRCDC 507
Query: 164 DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
D+ GSL+ C + G+C C+ C C HY++ C C C+P GS +
Sbjct: 508 DSV-----GSLSGYCEPTTGQCTCRTNYGDRDCGACGRGHYNY--PSCDLCTCDPIGSTE 560
Query: 223 NTPNCDSVKGQCECKDNVEGAQCRS 247
CD G C CKD G QC +
Sbjct: 561 EI--CDMDNGYCLCKDGFGGPQCST 583
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 29/236 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN-PIGSLNLQCN-------SEGRC 75
G C++C+ + GP C C +Y+ C C+C P+ S N S +C
Sbjct: 1830 GECINCRDNYSGPECLTCMKGHYEDPYTRSCQMCSCPLPVASNNFASTCQVAGDGSMVQC 1889
Query: 76 QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C+ G +G +C+ CD+ +Y + E G C+ C CN +++ +CD V G+C +S
Sbjct: 1890 LCEEGYSGRQCELCDIGYYGNPAELGGRCQPCSCNDNIDLRDPFSCDVVTGECLRCINNS 1949
Query: 133 RGRVHTELRVQSRKNFDPAGNRIW--DLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
G T + + F G+ ++ D + C D H G+ S G C CKP V
Sbjct: 1950 TG---TRCELCTDWFF---GDAVYAKDCQTCDCD-----HTGADGCD-KSNGVCLCKPNV 1997
Query: 191 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +CD+C + F A GC+ C+C G + +CD GQC+C+ V G +C
Sbjct: 1998 VGARCDQCAPQTFGFESAVGCERCDC---GIGAHHGDCDLYTGQCDCRPGVIGRKC 2050
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 40/237 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G+CL C+ GP C C +Y C C C GS + C+ G+C C G
Sbjct: 568 GYCL-CKDGFGGPQCSTCAAGFYNHP---HCQECGCAEPGSQSSSCDESGQCVCNYNYAG 623
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C+ C +Y + E C +C C+P G+ ++ CD GQC+ R + +
Sbjct: 624 KLCESCAPGYYKYPE--CLACNCDPYGAYGSS--CDQEFGQCD-----CRPTFEGLMCEK 674
Query: 144 SRKNF-----------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR-CQCKPGVT 191
+ NF +PAG + + YPLG G+ + +GR C+CK V+
Sbjct: 675 CKANFYNYPICEECNCNPAGAK-------QVPGYPLGGCGA-----SDDGRLCECKDRVS 722
Query: 192 GDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G CD C +++ GC+ C C G+V + CD +GQC CK V G C
Sbjct: 723 GRICDTCLAGYWNLNPNNPFGCEDCACYTPGTVGTSHVCDVNQGQCFCKPYVSGRSC 779
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PGV G KCD+C+ H+++G GC +C C G+ C+ G+C+C V
Sbjct: 2037 GQCDCRPGVIGRKCDQCEPGHWNYGSNGCATCNCEFEGAT----TCNVDTGKCQCLPGVT 2092
Query: 242 GAQC 245
G +C
Sbjct: 2093 GDKC 2096
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ + G C++C + C C+C IG+ + C+ G+C C+PGV
Sbjct: 1989 GVCL-CKPNVVGARCDQCAPQTFGFESAVGCERCDCG-IGAHHGDCDLYTGQCDCRPGVI 2046
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KCD+C+ H+++G GC +C C G+ T N D+ K QC
Sbjct: 2047 GRKCDQCEPGHWNYGSNGCATCNCEFEGA--TTCNVDTGKCQC 2087
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
+ G C DC+ G C++C ++ G N C CNC G+ CN + G+CQC PG
Sbjct: 2035 YTGQC-DCRPGVIGRKCDQCEPGHWNY-GSNGCATCNCEFEGATT--CNVDTGKCQCLPG 2090
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCE 105
VTGDKCD+C E GC C+
Sbjct: 2091 VTGDKCDQCLDRWALIPEQGCIECD 2115
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 96/231 (41%), Gaps = 55/231 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN + F +E GG C C+ + G C +C+ Y+ G C CNC
Sbjct: 1386 CNCNPDGSVSFSCEEF------GGQC-RCRPNIIGRTCSECQTGYF---GFPDCRPCNC- 1434
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCD 119
P G + Q G+C C P VTG+ CD C + + GC+ C C+P G + +C+
Sbjct: 1435 PSGLCDPQ---SGQCVCPPRVTGENCDSCLPRTFGYDPFIGCEECGCSPFGVQQGIMDCN 1491
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPLGH---- 170
GQC S + V AG RRC + +YP +
Sbjct: 1492 VDDGQC-----SCKPNV--------------AG------RRCDQCEAGHYSYPGCYPCSC 1526
Query: 171 --GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
GSL + C+ + C C+ V G +CD+C + + E GC C C
Sbjct: 1527 DPSGSLPMICDQDTSECLCRENVEGSQCDQCKASTFYLEERNPEGCTKCFC 1577
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS++ C G +C+C+P + G C C ++ F + C+ C C P+G CD
Sbjct: 1392 GSVSFSCEEFGGQCRCRPNIIGRTCSECQTGYFGFPD--CRPCNC-PSGL------CDPQ 1442
Query: 231 KGQCECKDNVEGAQCRS 247
GQC C V G C S
Sbjct: 1443 SGQCVCPPRVTGENCDS 1459
>gi|195126995|ref|XP_002007954.1| GI13230 [Drosophila mojavensis]
gi|193919563|gb|EDW18430.1| GI13230 [Drosophila mojavensis]
Length = 974
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 130/298 (43%), Gaps = 68/298 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G SN C +D+E+ NR G GG C +CQ + +G NC KC+ YY+ G
Sbjct: 337 CNCHGHSNECIYDEEV-NRKGLSLDIHGHYDGGGVCQNCQHNTEGTNCNKCKPKYYRPRG 395
Query: 51 DNF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C+ CNC+ S G+C+C+ CD C +Y G C+ CE
Sbjct: 396 KYWNETDVCSPCNCDFFYSTGHCEEETGKCECRAAFQPPNCDSCSYGYY--GYPQCRECE 453
Query: 106 CNPAGSVKNTPNCDSVKG------------------------QCESAQLSSRGRVHTELR 141
CN G+ N NC++V G +C++ Q + G ++ +
Sbjct: 454 CNLNGT--NGYNCEAVNGICPCKTNFAGALCKECAESYYGFPECKACQCNKLGSINNDCD 511
Query: 142 VQS-----RKNFDPAGNRIWDLRRCKRDTY--PL------GHGGSLNLQCNSE-GRCQCK 187
V S N+ A RCK Y P H G+ + CN E G+C C+
Sbjct: 512 VVSGNCTCLSNWGGA-----QCERCKDGYYNEPTCSYCDCDHEGTESEICNKETGQCICR 566
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G G +CDRC ++++ C+ C C+ GS T CD+ G+C C N G C
Sbjct: 567 EGFGGPRCDRCLPGYFNY--PSCQPCNCSTTGSSAIT--CDNT-GKCNCLINYSGKLC 619
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 94/228 (41%), Gaps = 29/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C CNC+ GS + CN +G C CKP G +C+
Sbjct: 609 NCLINYSGKLCNMCSAGYYNYPE---CLPCNCDEHGSEGVTCNEDG-CFCKPNFDGRQCE 664
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
RC + Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 665 RCKESFYNF--PACEDCNCDPAGVIDQFAGCGSVPVGELCKCKERVTGRICNECKP---- 718
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G L+ G C CKP G +C C
Sbjct: 719 -------LYWNLTITNPEGCQECDCFIDGTVSGLDTCAPKSGNCHCKPHTMGRQCRECKD 771
Query: 201 NHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D GCK C C+ GS K+ CD + GQC+C V G C
Sbjct: 772 GTFDLDGSSLFGCKDCSCDVGGSWKS--ECDKISGQCKCHPRVTGRAC 817
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN--LQCNSEG---RCQCKPGVTG 83
C+ + DG CE+C++++Y C CNC+P G ++ C S C+CK VTG
Sbjct: 654 CKPNFDGRQCERCKESFYNFPA---CEDCNCDPAGVIDQFAGCGSVPVGELCKCKERVTG 710
Query: 84 DKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
C+ C +++ GC+ C+C G+V C G C + + GR +
Sbjct: 711 RICNECKPLYWNLTITNPEGCQECDCFIDGTVSGLDTCAPKSGNCH-CKPHTMGR---QC 766
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCD 199
R FD G+ ++ + C D GGS +C+ G+C+C P VTG C +
Sbjct: 767 RECKDGTFDLDGSSLFGCKDCSCDV-----GGSWKSECDKISGQCKCHPRVTGRACTQPL 821
Query: 200 VNHY 203
HY
Sbjct: 822 TTHY 825
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+ CD C +Y + + C+ CECN G+ N NC++V G C CK N
Sbjct: 423 GKCECRAAFQPPNCDSCSYGYYGYPQ--CRECECNLNGT--NGYNCEAVNGICPCKTNFA 478
Query: 242 GAQCR 246
GA C+
Sbjct: 479 GALCK 483
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNC---NPIGSLNLQCNSEGRCQCK 78
G C+ G C +C+ Y+ + N C C+C + L+ G C CK
Sbjct: 699 GELCKCKERVTGRICNECKPLYWNLTITNPEGCQECDCFIDGTVSGLDTCAPKSGNCHCK 758
Query: 79 PGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
P G +C C +D GCK C C+ GS K+ CD + GQC+
Sbjct: 759 PHTMGRQCRECKDGTFDLDGSSLFGCKDCSCDVGGSWKS--ECDKISGQCK 807
>gi|118082521|ref|XP_416155.2| PREDICTED: netrin-4 [Gallus gallus]
Length = 778
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 22/144 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD + + +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 482 CKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDA 541
Query: 54 CTACNCNPIGSLNLQCN-------SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L S G C CKPGV G +CDRC ++ FG +GC+ C+C
Sbjct: 542 CKPCSCHPLGSAALPLGPRTFCDPSTGDCPCKPGVAGPRCDRCLPGYWGFGTSGCRPCDC 601
Query: 107 NPAGSVKNTPNCDSVKGQCESAQL 130
+C + G C S+ +
Sbjct: 602 --------ARSCHPLTGDCHSSSV 617
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
S G C CKPGV G +CDRC ++ FG +GC+ C+C
Sbjct: 566 STGDCPCKPGVAGPRCDRCLPGYWGFGTSGCRPCDC 601
>gi|242004311|ref|XP_002423043.1| Laminin beta-1 chain precursor, putative [Pediculus humanus
corporis]
gi|212505974|gb|EEB10305.1| Laminin beta-1 chain precursor, putative [Pediculus humanus
corporis]
Length = 1767
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 109/226 (48%), Gaps = 36/226 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNF 53
CNCN + C FD ++ TG+ GG C +CQ + G NCE+C YY G N
Sbjct: 323 CNCNSHATSCHFDSAVFELTGNVTGGVCDNCQHNTQGRNCEECIPFYYHDPGYDIQDPNA 382
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C+C+P GS + C+S GRC CKP V G +CDRC +++F E G
Sbjct: 383 CQPCDCDPRGSTDDGICDSHTDPGNGLESGRCHCKPNVDGRRCDRCKEGYWNFDENSPEG 442
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C CN G+V N C+ G+C T R + ++ + + W L
Sbjct: 443 CQACSCNIHGTVNNQ-GCNVNTGEC------------TCKRYVTGRDCNQCLPQFWGLSE 489
Query: 161 CKRDTYPLG--HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
+ P GG+ N C+ G+C+C+P V G CD+ + +++
Sbjct: 490 DRDGCKPCNCDLGGAYNNDCDVITGQCRCRPHVVGRACDQPEQSYF 535
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKP 79
GHC+ C + +G +CEKC++ YY + + C C C+ +G+ N + G+C C P
Sbjct: 979 GHCIQCLFNTEGEHCEKCKEGYYGDAINQQCRECVCDLLGT-NATAGPCDRTTGQCPCLP 1037
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G CD C NH+ GC+ C C+P GS + C+ GQC A R
Sbjct: 1038 NVIGLSCDTCKENHWKIASGNGCEPCGCDPVGSY--SEQCNYFDGQCNCAPGFGSRRCD- 1094
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDR 197
Q + F G+ +C+ D GS LQC+ + G C C G+ G KCD+
Sbjct: 1095 ----QCQAYF--WGDPKVQCHQCECDV-----NGSATLQCHRNNGSCICLEGIGGSKCDK 1143
Query: 198 C 198
C
Sbjct: 1144 C 1144
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 75/151 (49%), Gaps = 25/151 (16%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C CNP GS++ +C+ G +C CKP V G +CDRC Y FG GC +C+CN S+
Sbjct: 758 CECNPTGSISYECDPLGGQCDCKPNVVGRRCDRCAPGTYGFGPEGCLACDCN---SLALD 814
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRV--QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
CD + GQC + R HT RV Q + F W+ C+R GH +
Sbjct: 815 NFCDQITGQC-------KCRQHTYGRVCDQCQIGF-------WNFPNCQRCECN-GHADT 859
Query: 174 LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY 203
+L+ G C C+ GD+CDRC +Y
Sbjct: 860 CDLKT---GVCISCRDATFGDRCDRCIEGYY 887
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 102/267 (38%), Gaps = 61/267 (22%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNP 61
+ F++RCF D + ++ +C G C+ C DNYY + C ACNC
Sbjct: 911 HSFASRCFLDPKTHDVV------CNCHIGYSGSRCDVCADNYYGDPELPGGSCQACNC-- 962
Query: 62 IGSLNLQCNSEGRC--------QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSV 112
S N+ G C QC G+ C++C +Y D C+ C C+ G+
Sbjct: 963 --SNNVDITRPGNCDPKTGHCIQCLFNTEGEHCEKCKEGYYGDAINQQCRECVCDLLGTN 1020
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR--RCKRDTYPLGH 170
CD GQC P + L CK + + +
Sbjct: 1021 ATAGPCDRTTGQC------------------------PCLPNVIGLSCDTCKENHWKIAS 1056
Query: 171 G-----------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS + QCN +G+C C PG +CD+C + + C CEC+
Sbjct: 1057 GNGCEPCGCDPVGSYSEQCNYFDGQCNCAPGFGSRRCDQCQAYFWGDPKVQCHQCECDVN 1116
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS T C G C C + + G++C
Sbjct: 1117 GSA--TLQCHRNNGSCICLEGIGGSKC 1141
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 99/277 (35%), Gaps = 84/277 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G C+ C+ G C++C + YY
Sbjct: 851 CECNGHADTCDLKT---------GVCISCRDATFGDRCDRCIEGYYGDPRLGIDIPCRPC 901
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGE 98
SG +F + C +P + C C G +G +CD C N+Y +
Sbjct: 902 PCPGSLDSGHSFASRCFLDPK-------THDVVCNCHIGYSGSRCDVCADNYYGDPELPG 954
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
C++C C+ + NCD G C ++ G H E
Sbjct: 955 GSCQACNCSNNVDITRPGNCDPKTGHCIQCLFNTEGE-HCE------------------- 994
Query: 159 RRCKRDTYPLGHGGSLNLQC------------------NSEGRCQCKPGVTGDKCDRCDV 200
+CK Y G ++N QC + G+C C P V G CD C
Sbjct: 995 -KCKEGYY----GDAINQQCRECVCDLLGTNATAGPCDRTTGQCPCLPNVIGLSCDTCKE 1049
Query: 201 NHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCEC 236
NH+ GC+ C C+P GS + C+ GQC C
Sbjct: 1050 NHWKIASGNGCEPCGCDPVGSY--SEQCNYFDGQCNC 1084
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS++ +C+ G +C CKP V G +CDRC Y FG GC +C+CN S+ CD +
Sbjct: 764 GSISYECDPLGGQCDCKPNVVGRRCDRCAPGTYGFGPEGCLACDCN---SLALDNFCDQI 820
Query: 231 KGQCECKDNVEGAQC 245
GQC+C+ + G C
Sbjct: 821 TGQCKCRQHTYGRVC 835
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
GRC CKP V G +CDRC +++F E GC++C CN G+V N C+ G+C CK
Sbjct: 412 GRCHCKPNVDGRRCDRCKEGYWNFDENSPEGCQACSCNIHGTVNNQ-GCNVNTGECTCKR 470
Query: 239 NVEGAQC 245
V G C
Sbjct: 471 YVTGRDC 477
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 33/238 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C DC+ + G C++C Y G C AC+CN + N G+C+C+
Sbjct: 774 GGQC-DCKPNVVGRRCDRCAPGTY-GFGPEGCLACDCNSLALDNFCDQITGQCKCRQHTY 831
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG----RVHT 138
G CD+C + ++F C+ CECN + CD G C S + ++ G R
Sbjct: 832 GRVCDQCQIGFWNF--PNCQRCECN-----GHADTCDLKTGVCISCRDATFGDRCDRCIE 884
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYP--LGHGGSLNLQCNSEGR-----CQCKPGVT 191
R D C+ P L G S +C + + C C G +
Sbjct: 885 GYYGDPRLGIDIP---------CRPCPCPGSLDSGHSFASRCFLDPKTHDVVCNCHIGYS 935
Query: 192 GDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
G +CD C N+Y + C++C C+ + NCD G C +C N EG C
Sbjct: 936 GSRCDVCADNYYGDPELPGGSCQACNCSNNVDITRPGNCDPKTGHCIQCLFNTEGEHC 993
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 63/161 (39%), Gaps = 42/161 (26%)
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
F G CECNP GS+ + CD + GQC+ + G R
Sbjct: 750 FVHDGAFQCECNPTGSI--SYECDPLGGQCDCKP-------------------NVVGRRC 788
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNS----------EGRCQCKPGVTGDKCDRCDVNHYDF 205
RC TY G G L CNS G+C+C+ G CD+C + ++F
Sbjct: 789 ---DRCAPGTYGFGPEGCLACDCNSLALDNFCDQITGQCKCRQHTYGRVCDQCQIGFWNF 845
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
C+ CECN + CD G C C+D G +C
Sbjct: 846 --PNCQRCECN-----GHADTCDLKTGVCISCRDATFGDRC 879
>gi|119603832|gb|EAW83426.1| laminin, beta 4, isoform CRA_b [Homo sapiens]
Length = 1610
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 289 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 348
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 349 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 408
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 409 CQPCDCNPLGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 462
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 463 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 493
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 107/278 (38%), Gaps = 87/278 (31%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C ++++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 222 CFCNGHASECRPMQKMRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 279
Query: 51 ---DNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S L S G C+ C+ G CDRC Y
Sbjct: 280 DLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 339
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S + DPA
Sbjct: 340 LKTISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 372
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY
Sbjct: 373 LGSV-------------------------AGQCLCKENVEGAKCDQCKPNHYGLSATDPL 407
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GC+ C+CNP GS+ CD GQC C V GA C
Sbjct: 408 GCQPCDCNPLGSLPFL-TCDVDTGQCLCLSYVTGAHCE 444
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN F+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 820 CPCNRFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 870
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 871 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACN 930
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 931 NNIDVTDPESCSRVTGECLRCLHNTQG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 985
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
P+ GG L G C C P VTG CDRC +++ G SC+CN AG+ K
Sbjct: 986 VSPMECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNL-VPGRGSCDCNRAGTQK 1044
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
P CD G C C++ V G +C
Sbjct: 1045 --PICDPDTGMCRCREGVSGQRC 1065
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCKP V G CDRC YD
Sbjct: 708 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDL 766
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 767 GHHGCHPCHCHPQGSKDTV--CDQVTGQC 793
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKP V G CDRC YD G GC C C+P GS CD V GQC C V
Sbjct: 743 GQCQCKPLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQGSKDTV--CDQVTGQCPCHGEVS 800
Query: 242 GAQC 245
G +C
Sbjct: 801 GRRC 804
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 72/191 (37%), Gaps = 37/191 (19%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C V+G +CDRC + FG C C CN + CD G C + +
Sbjct: 791 GQCPCHGEVSGRRCDRCLAGY--FGFPSCHPCPCNRFAEL-----CDPETGSCFNCGGFT 843
Query: 133 RGR-----VHTELRVQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GR + S DP+ N+ + H NL +
Sbjct: 844 TGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQYF------------AHSCYQNLW-S 890
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-E 235
S+ C C G TG +C C Y A C+ C CN V + +C V G+C
Sbjct: 891 SDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLR 950
Query: 236 CKDNVEGAQCR 246
C N +GA C+
Sbjct: 951 CLHNTQGANCQ 961
>gi|219841848|gb|AAI44592.1| Laminin, beta 4 [Homo sapiens]
Length = 1761
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNPLGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 536
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 107/277 (38%), Gaps = 87/277 (31%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C ++++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECRPMQKMRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S L S G C+ C+ G CDRC Y
Sbjct: 323 DLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S + DPA
Sbjct: 383 LKTISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 415
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY
Sbjct: 416 LGSV-------------------------AGQCLCKENVEGAKCDQCKPNHYGLSATDPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C+CNP GS+ CD GQC C V GA C
Sbjct: 451 GCQPCDCNPLGSLPFL-TCDVDTGQCLCLSYVTGAHC 486
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 90/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G ++C G
Sbjct: 989 GECLRCLHNTQGANCQLCKPGHYGSALNQTCRRCSCHASGVSPMECPPGGGACLCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -RCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCRCREGVSGQRC 1158
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 109/264 (41%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN F+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CPCNRFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGTPCQPCACN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTQG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 1028
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
P+ GG L G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1029 VSPMECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS- 1087
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD + GQC CK G +C
Sbjct: 1088 -QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCKP V G CDRC YD
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCHCHPQGSKDTV--CDQVTGQC 836
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKP V G CDRC YD G GC C C+P GS CD V GQC C V
Sbjct: 786 GQCQCKPLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQGSKDTV--CDQVTGQCPCHGEVS 843
Query: 242 GAQC 245
G +C
Sbjct: 844 GRRC 847
>gi|143770880|ref|NP_031382.2| laminin subunit beta-4 precursor [Homo sapiens]
gi|162416049|sp|A4D0S4.1|LAMB4_HUMAN RecName: Full=Laminin subunit beta-4; AltName: Full=Laminin
beta-1-related protein; Flags: Precursor
gi|51095144|gb|EAL24387.1| laminin, beta 4 [Homo sapiens]
gi|187954525|gb|AAI40805.1| Laminin, beta 4 [Homo sapiens]
Length = 1761
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNPLGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 536
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 107/277 (38%), Gaps = 87/277 (31%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C ++++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECRPMQKMRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S L S G C+ C+ G CDRC Y
Sbjct: 323 DLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S + DPA
Sbjct: 383 LKTISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 415
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY
Sbjct: 416 LGSV-------------------------AGQCLCKENVEGAKCDQCKPNHYGLSATDPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C+CNP GS+ CD GQC C V GA C
Sbjct: 451 GCQPCDCNPLGSLPFL-TCDVDTGQCLCLSYVTGAHC 486
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 90/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G ++C G
Sbjct: 989 GECLRCLHNTQGANCQLCKPGHYGSALNQTCRRCSCHASGVSPMECPPGGGACLCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -RCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCRCREGVSGQRC 1158
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN F+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CPCNRFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTQG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 1028
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
P+ GG L G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1029 VSPMECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS- 1087
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD + GQC CK G +C
Sbjct: 1088 -QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCKP V G CDRC YD
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCHCHPQGSKDTV--CDQVTGQC 836
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKP V G CDRC YD G GC C C+P GS CD V GQC C V
Sbjct: 786 GQCQCKPLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQGSKDTV--CDQVTGQCPCHGEVS 843
Query: 242 GAQC 245
G +C
Sbjct: 844 GRRC 847
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 72/191 (37%), Gaps = 37/191 (19%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C V+G +CDRC + FG C C CN + CD G C + +
Sbjct: 834 GQCPCHGEVSGRRCDRCLAGY--FGFPSCHPCPCNRFAEL-----CDPETGSCFNCGGFT 886
Query: 133 RGR-----VHTELRVQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GR + S DP+ N+ + H NL +
Sbjct: 887 TGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQYF------------AHSCYQNLW-S 933
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-E 235
S+ C C G TG +C C Y A C+ C CN V + +C V G+C
Sbjct: 934 SDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLR 993
Query: 236 CKDNVEGAQCR 246
C N +GA C+
Sbjct: 994 CLHNTQGANCQ 1004
>gi|402583138|gb|EJW77082.1| hypothetical protein WUBG_12009, partial [Wuchereria bancrofti]
Length = 333
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C+ C D Y+ G + C C+C+ IG+ + C+ G C CK G +G +CD
Sbjct: 114 CKTNFAGLTCDSCADGYF---GHSQCKYCDCDAIGTEDSICDKVTGACLCKSGFSGSRCD 170
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRK 146
C + Y +G CK C CN GS + CD G C A +S K
Sbjct: 171 ECSL--YFYGYPFCKECGCNKRGS--KSAKCDRKNGDCPCYANFTS-------------K 213
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 206
D +D +CK + GS + C++ G+C CK G++CD+C N Y+F
Sbjct: 214 KCDRCAAGYYDFPKCKPCS--CMAIGSKGMTCDNNGQCYCKKNFQGERCDQCKTNFYNF- 270
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVK 231
C+ C CNP G V P CD V+
Sbjct: 271 -PICEECNCNPKGVVAGFPGCDKVE 294
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 96/219 (43%), Gaps = 27/219 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C+ C Y + C +CNC+ +GSL+ CN S +C CK G CD
Sbjct: 67 CRSNYGGKLCQVCAPGYTNITAG--CISCNCDELGSLHNNCNESTAQCMCKTNFAGLTCD 124
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
C + FG + CK C+C+ G+ + CD V G C S R
Sbjct: 125 SCADGY--FGHSQCKYCDCDAIGTEDSI--CDKVTGACLCKSGFSGSRC----------- 169
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG 206
D + CK GS + +C+ + G C C T KCDRC +YDF
Sbjct: 170 -DECSLYFYGYPFCKECG--CNKRGSKSAKCDRKNGDCPCYANFTSKKCDRCAAGYYDFP 226
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CK C C GS T CD+ GQC CK N +G +C
Sbjct: 227 K--CKPCSCMAIGSKGMT--CDN-NGQCYCKKNFQGERC 260
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 96/237 (40%), Gaps = 42/237 (17%)
Query: 22 HGGHCLD------CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGR 74
H G C D C+ G NC++C +Y C C+C+ G+L+ C GR
Sbjct: 8 HTGDCEDETARCVCKPQFTGVNCDRCTPGHYSPPK---CKPCDCSVNGTLDDICLPINGR 64
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C C+ G C C + + AGC SC C+ GS+ N NC+ QC
Sbjct: 65 CPCRSNYGGKLCQVCAPGYTNI-TAGCISCNCDELGSLHN--NCNESTAQC--------- 112
Query: 135 RVHTELRVQSRKNF-----DPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKP 188
+ NF D + + +CK D +G S+ + G C CK
Sbjct: 113 --------MCKTNFAGLTCDSCADGYFGHSQCKYCDCDAIGTEDSICDK--VTGACLCKS 162
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +G +CD C + Y +G CK C CN GS + CD G C C N +C
Sbjct: 163 GFSGSRCDECSL--YFYGYPFCKECGCNKRGS--KSAKCDRKNGDCPCYANFTSKKC 215
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
P H G + RC CKP TG CDRC HY CK C+C+ G++ +
Sbjct: 5 PAKHTGDCE---DETARCVCKPQFTGVNCDRCTPGHYS--PPKCKPCDCSVNGTLDDI-- 57
Query: 227 CDSVKGQCECKDNVEGAQCR 246
C + G+C C+ N G C+
Sbjct: 58 CLPINGRCPCRSNYGGKLCQ 77
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
GRC C+ G C C + + AGC SC C+ GS+ N NC+ QC CK N
Sbjct: 63 GRCPCRSNYGGKLCQVCAPGYTNI-TAGCISCNCDELGSLHN--NCNESTAQCMCKTNFA 119
Query: 242 GAQCRS 247
G C S
Sbjct: 120 GLTCDS 125
>gi|334311561|ref|XP_001369335.2| PREDICTED: multiple epidermal growth factor-like domains protein
9-like [Monodelphis domestica]
Length = 621
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDK 85
+C G +C+ C + +Y S C +C+C P GS++ C+S G+CQCK GV G K
Sbjct: 242 ECLPGYKGLHCDFCEEGFYPASTKIQGLCWSCDCEPHGSISPTCSSSGKCQCKEGVGGSK 301
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C +Y F E GC+ C+CN + CD G C Q +S+G H E + +
Sbjct: 302 CDHCQDGYYGFNETGCQPCQCNNQSVI-----CDPFSGTCLKCQGNSKGD-HCE---ECK 352
Query: 146 KNFDPAGNRIWDLRRCK-RDTYPLG----HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
F + RC G H G L +C+ QCK G TG C+ C+
Sbjct: 353 DGFYKSPTSFHKCLRCPCSAVTSTGNCSIHSGELVPKCD-----QCKAGYTGPNCNICEN 407
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
+Y+ ++ C CEC+ TP C G+C +C N G C
Sbjct: 408 GYYN-SDSICMKCECSGHVDAIRTPKICKPESGECIDCLHNTTGFHCE 454
>gi|332868303|ref|XP_519311.3| PREDICTED: laminin subunit beta-4 [Pan troglodytes]
Length = 1761
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNPLGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 536
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 111/264 (42%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CPCNGFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGPPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCRPCACN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTQG---ANCQLCKPGHYGSAFNQT--CRRCSCHASG 1028
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
P+ GG L G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1029 VSPMECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS- 1087
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD + GQC CK G +C
Sbjct: 1088 -QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 107/277 (38%), Gaps = 87/277 (31%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C ++++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECRPMQKMRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S L S G C+ C+ G CDRC Y
Sbjct: 323 DLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S + DPA
Sbjct: 383 LKTISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 415
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY
Sbjct: 416 LGSV-------------------------AGQCLCKENVEGAKCDQCKPNHYGLSATDPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C+CNP GS+ CD GQC C V GA C
Sbjct: 451 GCQPCDCNPLGSLPFL-TCDVDTGQCLCLSYVTGAHC 486
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 90/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G ++C G
Sbjct: 989 GECLRCLHNTQGANCQLCKPGHYGSAFNQTCRRCSCHASGVSPMECPPGGGACLCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -RCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCRCREGVSGQRC 1158
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 23 GGHCL--------DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EG 73
GG CL C + G C++C D Y+ C +C+C+P S + C+ G
Sbjct: 1038 GGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTSQSSHCDQLTG 1097
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+C CK G G +C C N+Y C C+CN AG+ K P CD G C
Sbjct: 1098 QCPCKLGYGGKRCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMC 1147
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCKP V G CDRC YD
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCHCHPQGSKDTV--CDQVTGQC 836
>gi|327271443|ref|XP_003220497.1| PREDICTED: laminin subunit beta-3-like [Anolis carolinensis]
Length = 1196
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG SN+C FD +Y G GG C DCQ + G +CE C+ N+++ +
Sbjct: 343 CNCNGHSNKCHFDPAVYEANGGVSGGVCEDCQHNTAGEHCEHCKTNFFRNQRFDLGHPEA 402
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ GRC CK V GD+C C + GC+ C CN
Sbjct: 403 CLPCECDPDGTVPGSSCDPLNGRCVCKDNVQGDRCHLCKPGFTQLTNSNPQGCRDCACNV 462
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
GS +N P CD G+C + T C + + +
Sbjct: 463 LGSCRNMP-CDDETGRCFCLPSVVGEKCDT----------------------CAANHWKI 499
Query: 169 GHG-----------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN-----HYDFGEAGCK 211
G SL+LQCN G+C C+ G G C ++ Y GC+
Sbjct: 500 ASGEGCQACQCNPQNSLSLQCNQFTGQCPCREGYGGLTCSALEIRVCPDRSYGDIRTGCR 559
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+C+ G+ + CD G+C CK G++C
Sbjct: 560 ACDCSFEGTEEM--GCDKQTGRCLCKPGFTGSRC 591
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
C AC+C+ G+ + C+ + GRC CKPG TG +CD+C
Sbjct: 558 CRACDCSFEGTEEMGCDKQTGRCLCKPGFTGSRCDQC 594
>gi|4003503|gb|AAC95123.1| laminin beta-4 chain precursor [Homo sapiens]
Length = 1761
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNPLGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 536
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 107/277 (38%), Gaps = 87/277 (31%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C ++++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECRPMQKMRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S L S G C+ C+ G CDRC Y
Sbjct: 323 DLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S + DPA
Sbjct: 383 LKTISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 415
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY
Sbjct: 416 LGSV-------------------------AGQCLCKENVEGAKCDQCKPNHYGLSATDPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C+CNP GS+ CD GQC C V GA C
Sbjct: 451 GCQPCDCNPLGSLPFL-TCDVDTGQCLCLSYVTGAHC 486
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 90/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G ++C G
Sbjct: 989 GECLRCLHNTQGANCQLCKPGHYGSALNQTCRRCSCHASGVSPMECPPGGGACLCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -RCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCRCREGVSGQRC 1158
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN F+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CPCNRFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTQG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 1028
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
P+ GG L G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1029 VSPMECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS- 1087
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD + GQC CK G +C
Sbjct: 1088 -QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 23 GGHCL--------DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EG 73
GG CL C + G C++C D Y+ C +C+C+P S + C+ G
Sbjct: 1038 GGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTSQSSHCDQLTG 1097
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+C CK G G +C C N+Y C C+CN AG+ K P CD G C
Sbjct: 1098 QCPCKLGYGGKRCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMC 1147
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCKP V G CDRC YD
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCHCHPQGSKDTV--CDQVTGQC 836
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKP V G CDRC YD G GC C C+P GS CD V GQC C V
Sbjct: 786 GQCQCKPLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQGSKDTV--CDQVTGQCPCHGEVS 843
Query: 242 GAQC 245
G +C
Sbjct: 844 GRRC 847
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 72/191 (37%), Gaps = 37/191 (19%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C V+G +CDRC + FG C C CN + CD G C + +
Sbjct: 834 GQCPCHGEVSGRRCDRCLAGY--FGFPSCHPCPCNRFAEL-----CDPETGSCFNCGGFT 886
Query: 133 RGR-----VHTELRVQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GR + S DP+ N+ + H NL +
Sbjct: 887 TGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQYF------------AHSCYQNLW-S 933
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-E 235
S+ C C G TG +C C Y A C+ C CN V + +C V G+C
Sbjct: 934 SDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLR 993
Query: 236 CKDNVEGAQCR 246
C N +GA C+
Sbjct: 994 CLHNTQGANCQ 1004
>gi|194209476|ref|XP_001492741.2| PREDICTED: laminin subunit beta-4 [Equus caballus]
Length = 1747
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 21/145 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C+CNG S+RC F+ +Y +G GG C DCQ + +G +C +CR +Y+ S
Sbjct: 332 CSCNGHSDRCHFNSTVYLASGGLSGGVCEDCQHNTEGQHCHRCRPLFYRDPLKAISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY A G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPAVGSVAGQCLCKDNVQGAKCDQCQPNHYGLSAADPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQC 125
C+ C+C+P GS+ +P CD GQC
Sbjct: 452 CQPCDCHPHGSLPLSP-CDVDTGQC 475
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 114/270 (42%), Gaps = 47/270 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CLCNGFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQSCRPCPC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
+ S N S+ C C G TG +C+ C Y A C+ C CN
Sbjct: 914 PDVPSSNQYFAHSCYQNPWGSDVICDCLQGYTGKQCEECSAGFYGNPRISGAPCQPCACN 973
Query: 108 PAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK-NFDPAGNRIWD 157
+ + +C V G+C + QL G + + R+ + P+G +
Sbjct: 974 NNIDLSDPDSCSRVTGECLRCLHNTHGPNCQLCKPGHFGSAINQTCRRCSCHPSG---VN 1030
Query: 158 LRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCEC 215
C+ D G L C+ + G C C P VTG CD C +++ GC+ C+C
Sbjct: 1031 PAECRPD-----QGACL---CDPDTGTCPCLPNVTGQACDHCADGYWNMIPGRGCQPCDC 1082
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+P S ++ +CD V GQC CK +G +C
Sbjct: 1083 DPQTS--HSRHCDQVTGQCLCKLGYDGKRC 1110
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 46/201 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE----------G 73
G CL C + GPNC+ C+ ++ + + C C+C+P G +C + G
Sbjct: 989 GECLRCLHNTHGPNCQLCKPGHFGSAINQTCRRCSCHPSGVNPAECRPDQGACLCDPDTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CD C +++ GC+ C+C+P S ++ +CD V GQC +L
Sbjct: 1049 TCPCLPNVTGQACDHCADGYWNMIPGRGCQPCDCDPQTS--HSRHCDQVTGQC-LCKLGY 1105
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE----------- 181
G+ +E CK + Y G + CN E
Sbjct: 1106 DGKRCSE---------------------CKENYYGDPQGRCIPCDCNQEGTQKPVCDQAT 1144
Query: 182 GRCQCKPGVTGDKCDRCDVNH 202
G C+C+ GV+G +CDRC H
Sbjct: 1145 GMCRCQEGVSGPRCDRCARGH 1165
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 112/277 (40%), Gaps = 87/277 (31%)
Query: 1 CNCNGFSNRC----FFDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C ++++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECGPMQTVRGDVFSPPGMVHGRCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCN---------PIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY-DF 96
D+ C AC+CN L S G C+ C+ G C RC Y D
Sbjct: 323 GLQDSTCRACSCNGHSDRCHFNSTVYLASGGLSGGVCEDCQHNTEGQHCHRCRPLFYRDP 382
Query: 97 GEA-----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
+A C CEC+P G++ G C S + DPA
Sbjct: 383 LKAISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 415
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY A
Sbjct: 416 VGSV-------------------------AGQCLCKDNVQGAKCDQCQPNHYGLSAADPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C+C+P GS+ +P CD GQC C+ + G +C
Sbjct: 451 GCQPCDCHPHGSLPLSP-CDVDTGQCLCQPSATGPRC 486
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G +C C N+Y + C C+CN G+ K P CD G C C++ V
Sbjct: 1097 GQCLCKLGYDGKRCSECKENYYGDPQGRCIPCDCNQEGTQK--PVCDQATGMCRCQEGVS 1154
Query: 242 GAQC 245
G +C
Sbjct: 1155 GPRC 1158
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 55 TACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
AC C+P GS+ C+ G +CQCKP V G CDRC Y G GC SC C+P GS
Sbjct: 767 VACKCHPQGSVGPSCSRLGGQCQCKPHVAGRCCDRCSAGSYGLGHHGCHSCHCHPEGS-- 824
Query: 114 NTPNCDSVKGQC 125
+ CD + GQC
Sbjct: 825 KSIVCDQITGQC 836
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKP V G CDRC Y G GC SC C+P GS + CD + GQC C+ V
Sbjct: 786 GQCQCKPHVAGRCCDRCSAGSYGLGHHGCHSCHCHPEGS--KSIVCDQITGQCPCQGEVA 843
Query: 242 GAQC 245
G +C
Sbjct: 844 GRRC 847
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 94/232 (40%), Gaps = 39/232 (16%)
Query: 6 FSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS 64
+S +F + L R+ H L D G N S +NFC+ + +
Sbjct: 684 YSIDVYFSQPLEGRSHAHSHILVDSLGLIPQIN-----------SLENFCSEQDLDEYQL 732
Query: 65 LN-LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 123
N ++ SE R P V C+R V+ G +C+C+P GSV P+C + G
Sbjct: 733 HNCVEIASEAR----PRVLPSACERLIVSVSARLHEGAVACKCHPQGSVG--PSCSRLGG 786
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EG 182
QC+ + H R R + AG+ + L + GS ++ C+ G
Sbjct: 787 QCQC-------KPHVAGRCCDRCS---AGS--YGLGHHGCHSCHCHPEGSKSIVCDQITG 834
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
+C C+ V G +CDRC + FG C+ C CN + CD G C
Sbjct: 835 QCPCQGEVAGRRCDRCLAGY--FGFPNCRPCLCNGFAEL-----CDPETGSC 879
>gi|326917477|ref|XP_003205025.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-1-like
[Meleagris gallopavo]
Length = 3082
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 108/234 (46%), Gaps = 39/234 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G CL C G+ G +CEKC D YY + C AC C+ GSL+ C+ + G C CK V
Sbjct: 863 GQCLKCVGNTAGLHCEKCADGYYGDAVTEKSCRACECHVNGSLSSVCHHKTGVCDCKSDV 922
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G KCD+C Y GC C C+ GS+ + +C+ +GQC H
Sbjct: 923 IGQKCDKCLNGFYGLLTGLGCIPCNCSQFGSI--SEDCNH-QGQC-----------HCLP 968
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPGVTG 192
V K RC + L +GG CN++ G+C C P G
Sbjct: 969 GVAGEK-----------CDRCAHGFHSLQNGGCTPCDCAHTQNNCNADSGKCICPPHTWG 1017
Query: 193 DKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KC+ C+ NH+ + GCK+C C+ +GS N+ CD + GQC+CK G C
Sbjct: 1018 PKCELCEENHWGLSPKLGCKACNCSGSGS--NSLQCDVLTGQCQCKAEFGGQNC 1069
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 104/239 (43%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ D G C+KC + +Y C CNC+ GS++ CN +G+C C PGV G+KCD
Sbjct: 917 DCKSDVIGQKCDKCLNGFYGLLTGLGCIPCNCSQFGSISEDCNHQGQCHCLPGVAGEKCD 976
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC + GC C+C +N N DS K C HT
Sbjct: 977 RCAHGFHSLQNGGCTPCDC---AHTQNNCNADSGKCICPP---------HT--------- 1015
Query: 148 FDPAGNRIWDLR--RCKRDTYPLGH-----------GGSLNLQCNS-EGRCQCKPGVTGD 193
W + C+ + + L GS +LQC+ G+CQCK G
Sbjct: 1016 --------WGPKCELCEENHWGLSPKLGCKACNCSGSGSNSLQCDVLTGQCQCKAEFGGQ 1067
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGS-------VKNTPNCDSVKGQCECKDNVEGAQC 245
C RC + + D+ + C +C+C+ +G+ + C+ G C CK+NV G QC
Sbjct: 1068 NCSRCALGYRDYPD--CVACDCDLSGTKAEMCDDTEGLCGCEEETGICTCKENVFGLQC 1124
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 67/142 (47%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYY--QKS 49
CNC+ + C++++ + N G GG CL+C G NCE C D Y+ QK
Sbjct: 322 CNCHNKAEDCYYNQSIADQKRSMNIHGQYIGGGVCLNCSQHTTGINCEMCADGYFRPQKV 381
Query: 50 G---DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D+ C C C+P GSL+ C + G+CQC+ G TG+KCDRC +
Sbjct: 382 SPYDDHPCYPCGCDPFGSLSSVCVKDEHKSDSQHGTWPGQCQCRDGYTGEKCDRCAFGYR 441
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
G C C C+ GS+ P
Sbjct: 442 --GYPNCLRCNCSLIGSINEDP 461
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HC C +G CEKC YY Q G + C C CNP GS+++ C+ G+C CK G
Sbjct: 1470 HCDACLPGYEGQYCEKCSLGYYGDPQLPGGS-CHLCRCNPSGSVHVNCDRVTGKCLCKQG 1528
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
VTG C+ C+ H E C SC+ N G + N N DS+ S L+ G VH
Sbjct: 1529 VTGQLCEECEPRHL-LLEGECVSCDDNCTGVLLN--NLDSLSKDILSLNLT--GIVHV 1581
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 112/262 (42%), Gaps = 40/262 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG + C D + G C CQ + GP C++C +Y + C C
Sbjct: 737 CKCNGHATEC--DTQ--------GVCFACQHNTTGPFCDQCLPGFYGSPSQGTPEDCQPC 786
Query: 58 NCNPIGS----LNLQCN-SEGRC----QCKPGVTGDKCDRCDVNHYD---FGEAGCKSCE 105
C P+ S + C SEG +C PG TG +C+RC +Y C CE
Sbjct: 787 AC-PLSSAANNFSPTCQLSEGEGIVCDKCLPGYTGSRCERCANGYYGNPLVPGQSCVPCE 845
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
CN + + CD+V GQC ++ G +H E + D + R C+
Sbjct: 846 CNGNVNPQEDGYCDTVTGQCLKCVGNTAG-LHCE-KCADGYYGDAVTEK--SCRACECHV 901
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
GSL+ C+ + G C CK V G KCD+C Y GC C C+ GS+
Sbjct: 902 -----NGSLSSVCHHKTGVCDCKSDVIGQKCDKCLNGFYGLLTGLGCIPCNCSQFGSI-- 954
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ +C+ +GQC C V G +C
Sbjct: 955 SEDCNH-QGQCHCLPGVAGEKC 975
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 60/138 (43%), Gaps = 25/138 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACN 58
C CN S C D E G CL+C+ + G C C YY K N C+ C
Sbjct: 1398 CQCNNHSETC--DPE-------TGKCLNCRDNTVGDYCSACAPGYYGKVIGSVNDCSLCA 1448
Query: 59 C---NPIGSLNLQCNSEGRC-----QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
C NP+ S + C +G C PG G C++C + +Y C C CN
Sbjct: 1449 CPRANPV-SFSPTCVLKGVQDYHCDACLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCRCN 1507
Query: 108 PAGSVKNTPNCDSVKGQC 125
P+GSV NCD V G+C
Sbjct: 1508 PSGSVH--VNCDRVTGKC 1523
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C PG G C++C + +Y C C CNP+GSV NCD V G+C CK V G
Sbjct: 1474 CLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCRCNPSGSVH--VNCDRVTGKCLCKQGVTG 1531
Query: 243 AQC 245
C
Sbjct: 1532 QLC 1534
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQC+ G TG+KCDRC + G C C C+ GS+ P + C CK+NVE
Sbjct: 420 GQCQCRDGYTGEKCDRCAFGYR--GYPNCLRCNCSLIGSINEDPCTEP----CLCKENVE 473
Query: 242 GAQC 245
G C
Sbjct: 474 GENC 477
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 99/253 (39%), Gaps = 65/253 (25%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC-QCKPGVTG 83
+C G +CE C YY+ G F C C CN + +C+++G C C+ TG
Sbjct: 705 ECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCNGHAT---ECDTQGVCFACQHNTTG 761
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNCDSVKGQ------CESAQLS 131
CD+C Y G C+ C C P S N +P C +G+ C
Sbjct: 762 PFCDQCLPGFYGSPSQGTPEDCQPCAC-PLSSAANNFSPTCQLSEGEGIVCDKCLPGYTG 820
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PLGHG---------GSLNLQ--- 177
SR RC Y PL G G++N Q
Sbjct: 821 SR------------------------CERCANGYYGNPLVPGQSCVPCECNGNVNPQEDG 856
Query: 178 -CNS-EGRC-QCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
C++ G+C +C G C++C +Y E C++CEC+ GS+ + C G
Sbjct: 857 YCDTVTGQCLKCVGNTAGLHCEKCADGYYGDAVTEKSCRACECHVNGSLSSV--CHHKTG 914
Query: 233 QCECKDNVEGAQC 245
C+CK +V G +C
Sbjct: 915 VCDCKSDVIGQKC 927
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 33 RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 92
RDG EKC + G C CNC+ IGS+N +E C CK V G+ CD C
Sbjct: 425 RDGYTGEKCDRCAFGYRGYPNCLRCNCSLIGSINEDPCTEP-CLCKENVEGENCDLCKPG 483
Query: 93 HYDFGE---AGCKSCEC 106
Y+ E GC C C
Sbjct: 484 FYNLQERNPQGCTECFC 500
>gi|148744318|gb|AAI42620.1| LAMB4 protein [Homo sapiens]
Length = 772
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNPLGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 536
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 107/278 (38%), Gaps = 87/278 (31%)
Query: 1 CNCNGFSNRCFFDKEL----YNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C +++ ++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECRPMQKMRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S L S G C+ C+ G CDRC Y
Sbjct: 323 DLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S DPA
Sbjct: 383 LKTISDPYACIPCECDPDGTISG--------GICVSHS-------------------DPA 415
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY
Sbjct: 416 LGSV-------------------------AGQCLCKENVEGAKCDQCKPNHYGLSATDPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GC+ C+CNP GS+ CD GQC C V GA C
Sbjct: 451 GCQPCDCNPLGSLPFL-TCDVDTGQCLCLSYVTGAHCE 487
>gi|47213438|emb|CAF89545.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3652
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNF 53
C+CNG S++C FD +Y T + GG C DC G NCE C+ YYQ +
Sbjct: 1436 CDCNGHSDKCHFDMAVYLATANTSGGVCDDCSHHTTGRNCELCKPFYYQDPSRDIRDQHV 1495
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C AC+C+P GSL C+S G+C+CK V G +CD C Y + G
Sbjct: 1496 CVACDCDPAGSLEEGLCDSHTDVRSGMIAGQCRCKAHVRGARCDGCMEGFYGLSSSNPLG 1555
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQC 125
C+SC C+P G++ TP CD + G C
Sbjct: 1556 CESCNCDPRGTLGETP-CDQISGDC 1579
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 26/148 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-----F 53
CNC+G ++ C FD +Y +G+ GG C CQ + G C+ C+ YY+ +
Sbjct: 3461 CNCHGHAHTCHFDMAVYLASGNVSGGVCDHCQHNTMGHACDMCKPFYYRDPLKDSRDPQV 3520
Query: 54 CTACNCNPIG-------------SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-- 98
C+AC+C+P G SL L G+C+CK V G +CDRC + F
Sbjct: 3521 CSACDCDPDGSQDGGLCDGHTDSSLGLVA---GQCRCKANVDGARCDRCKAGFFGFSADD 3577
Query: 99 -AGCKSCECNPAGSVKNTPNCDSVKGQC 125
GC+ C+C+ G+V + CD V G C
Sbjct: 3578 PRGCQPCQCDRLGTVLGSSQCDPVSGDC 3605
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 93/232 (40%), Gaps = 59/232 (25%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQC------ 77
G CL C +GP+C +C+ YY + C C C G+ C SEGRC C
Sbjct: 2097 GQCLKCLHHTEGPSCAQCQLGYYGNALAQDCRRCVCVTSGTKPSAC-SEGRCHCDRQSGA 2155
Query: 78 ---KPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
+ V G CD C +H+++G+AG C+ C C+P ++ C
Sbjct: 2156 CPCREHVEGHICDHCAPHHWNYGQAGGCQPCACDPD---------HAMGAHC-------- 2198
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
N PA + W L +P+ G+C C+PG G
Sbjct: 2199 -------------NMVPAASPHWRL-------HPIP---------EFSGQCHCQPGFGGR 2229
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C+ H+ C+ C C+ GS CD G+C+CK + G +C
Sbjct: 2230 QCTECEQFHWGDPREQCQECNCHLLGS--EVAQCDQDTGKCKCKVGMAGKRC 2279
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G +CDRC + F GC+ C+C+ G+V + CD V G C CK
Sbjct: 3550 GQCRCKANVDGARCDRCKAGFFGFSADDPRGCQPCQCDRLGTVLGSSQCDPVSGDCFCKR 3609
Query: 239 NVEGAQC 245
V G C
Sbjct: 3610 LVTGRTC 3616
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
AC C+P GSL+ +C+ G +C CK V G CDRC Y FG GC +
Sbjct: 1941 ACQCDPQGSLSSECSPVGGQCPCKAHVVGQHCDRCAPGTYGFGVNGCAAL 1990
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C+ C + +Y S N C +CNC+P G+L C+ G C CK VTG
Sbjct: 1529 CKAHVRGARCDGCMEGFYGLSSSNPLGCESCNCDPRGTLGETPCDQISGDCACKRYVTGR 1588
Query: 85 KCDRCDVNHYDFG--EAGCKSCECNPAGSVKN 114
C++C + GC+ C+C+ G+ N
Sbjct: 1589 YCNQCLPEFWGLSNDRLGCRPCDCDFGGAYNN 1620
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
CQ G C +C ++ + C CNC+ +GS QC+ + G+C+CK G+ G +CD
Sbjct: 2222 CQPGFGGRQCTECEQFHWGDPREQ-CQECNCHLLGSEVAQCDQDTGKCKCKVGMAGKRCD 2280
Query: 88 RC 89
+C
Sbjct: 2281 QC 2282
>gi|348517124|ref|XP_003446085.1| PREDICTED: laminin subunit alpha-5 [Oreochromis niloticus]
Length = 3663
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 26/222 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL C+ + G CE+CR ++ C C C+P SL+ C + G C C+P +
Sbjct: 591 AGRCL-CRPEFQGARCEQCRSGFHSYPD---CRECTCDPRTSLDSSCTASGHCHCRPNYS 646
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G C++C +Y G C C+C+P GS ++ CD + GQC R
Sbjct: 647 GASCNQCAPGYY--GYPSCTPCQCSPEGSRYSS--CDQLTGQCVCLPSVVGLRC------ 696
Query: 143 QSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
D + + C+ + +P G + GRC+C+ V G CD C
Sbjct: 697 ------DSCAHGAYGFPNCQAGSCHPAGSVQTT--AAPPLGRCECRHHVEGLACDTCKPL 748
Query: 202 HYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
+++ GC +CECN AG+V C GQC+CK NV
Sbjct: 749 YWNLSPDTPEGCSNCECNVAGTVSAVAECAQESGQCQCKPNV 790
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 109/236 (46%), Gaps = 40/236 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C+ + G +C +C YY G CT C C+P GS C+ G+C C P V
Sbjct: 637 GHC-HCRPNYSGASCNQCAPGYY---GYPSCTPCQCSPEGSRYSSCDQLTGQCVCLPSVV 692
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CD C H +G C++ C+PAGSV+ T G+CE R H E
Sbjct: 693 GLRCDSC--AHGAYGFPNCQAGSCHPAGSVQTT--AAPPLGRCEC-------RHHVE--- 738
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLG-------HGGSLNL--QCNSE-GRCQCKPGVTG 192
D W+L DT P G G+++ +C E G+CQCKP V
Sbjct: 739 --GLACDTCKPLYWNL---SPDT-PEGCSNCECNVAGTVSAVAECAQESGQCQCKPNVCS 792
Query: 193 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C ++ E+ GC+ C+C+ G+V P+C G C C+ NVEG +C
Sbjct: 793 GTCSTCKDGFFNLQESDYFGCRGCQCDIGGAVG--PSCGERSGHCRCRPNVEGPKC 846
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 103/233 (44%), Gaps = 48/233 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
GH + C+ GP C++C Y+ C C C+ +GSL C++ GRC C+P G
Sbjct: 547 GHSV-CRSGFLGPQCDQCAPGYFNYP---LCQLCGCSSLGSLPEGCDAAGRCLCRPEFQG 602
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+C++C + + + C+ C C+P S+ ++ C + G C
Sbjct: 603 ARCEQCRSGFHSYPD--CRECTCDPRTSLDSS--C-TASGHC-----------------H 640
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-----------GRCQCKPGVTG 192
R N+ A +C Y G+ QC+ E G+C C P V G
Sbjct: 641 CRPNYSGAS-----CNQCAPGYY--GYPSCTPCQCSPEGSRYSSCDQLTGQCVCLPSVVG 693
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CD C H +G C++ C+PAGSV+ T G+CEC+ +VEG C
Sbjct: 694 LRCDSC--AHGAYGFPNCQAGSCHPAGSVQTT--AAPPLGRCECRHHVEGLAC 742
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 98/266 (36%), Gaps = 74/266 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRT------GH---GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+ S C++D E+ R GH GG CL+CQ G NCE+C YY+
Sbjct: 348 CNCHRHSFDCYYDPEVDERRASLDIHGHYRGGGVCLNCQHHTTGVNCERCVPTYYRSPDH 407
Query: 52 NFCTACNCNP----IGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGE-------A 99
+ C+P + + C + GRC CKP TG+ CD C F E
Sbjct: 408 PIHSPLACSPCDCDVEFTDGTCEDLTGRCFCKPNYTGENCDSCAAGFTGFPECYRDPTHP 467
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
+ E PAG + N CE S+ G V R R
Sbjct: 468 TTINGEARPAGEIIN----------CEC---SAAGTVENSCRADPRT------------- 501
Query: 160 RCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
G C CKPG TGD CD C Y C++C+C G
Sbjct: 502 ----------------------GTCICKPGFTGDHCDACAPGFYGL---NCEACQCAGPG 536
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ + CD V G C+ G QC
Sbjct: 537 CLDGS--CDEVTGHSVCRSGFLGPQC 560
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 91/209 (43%), Gaps = 42/209 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTA 56
C+C+G S+ + + TGH CL C + GP CE C YY GD CT
Sbjct: 1953 CDCSGNSDPNMLFTDCHPLTGH---CLSCMHNTAGPRCESCAPGYY---GDAINAKNCTQ 2006
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT 115
C+C+P G+ + +S G+C+CKPGVTG CDRC+ + F +GC+ C+C+ A ++
Sbjct: 2007 CDCSPCGTESCDPHS-GQCRCKPGVTGLLCDRCEDGSFGFDSCSGCRKCDCDAAAALVQP 2065
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
CD GQC G R+C + G G
Sbjct: 2066 --CDPQSGQCACR----------------------PGVSDSSCRQCAPGFWDYGPNGCKK 2101
Query: 176 LQCNS------EGRCQCKPGVTGDKCDRC 198
C G C+C G+TG +CD C
Sbjct: 2102 CDCRGGHCDPRTGECRCPDGMTGRQCDVC 2130
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 29/225 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C+ G +C+ C +Y G N C AC C G L+ C+ G C+ G
Sbjct: 502 GTCI-CKPGFTGDHCDACAPGFY---GLN-CEACQCAGPGCLDGSCDEVTGHSVCRSGFL 556
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CD+C ++++ C+ C C+ GS+ CD+ G+C R
Sbjct: 557 GPQCDQCAPGYFNY--PLCQLCGCSSLGSLPE--GCDAA-GRCLCRPEFQGARCE----- 606
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
Q R F + D R C D SL+ C + G C C+P +G C++C +
Sbjct: 607 QCRSGF----HSYPDCRECTCDPR-----TSLDSSCTASGHCHCRPNYSGASCNQCAPGY 657
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
Y G C C+C+P GS ++ CD + GQC C +V G +C S
Sbjct: 658 Y--GYPSCTPCQCSPEGSRYSS--CDQLTGQCVCLPSVVGLRCDS 698
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 74/280 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN----FCTA 56
C+CNG S++C G C++C+ + G +CE+C+ + + + C++
Sbjct: 1846 CSCNGHSDQCL---------DGSGICVNCRHNTAGDHCERCQGGFLGNNSVDGQAITCSS 1896
Query: 57 CNC---NPIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
C C P + C G +C+C PG G C+RC Y + C+ C+C
Sbjct: 1897 CPCPLRAPSNNFAEGCVQRGDGMQCRCMPGYAGPNCERCAPGFYGNPVVLGSRCQPCDC- 1955
Query: 108 PAGSVKNTPN-----CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
S + PN C + G C S ++ G RC+
Sbjct: 1956 ---SGNSDPNMLFTDCHPLTGHCLSCMHNTAG------------------------PRCE 1988
Query: 163 RDTYPLGHGGSLNLQ---------CNSE------GRCQCKPGVTGDKCDRCDVNHYDFGE 207
P +G ++N + C +E G+C+CKPGVTG CDRC+ + F
Sbjct: 1989 -SCAPGYYGDAINAKNCTQCDCSPCGTESCDPHSGQCRCKPGVTGLLCDRCEDGSFGFDS 2047
Query: 208 -AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+GC+ C+C+ A ++ CD GQC C+ V + CR
Sbjct: 2048 CSGCRKCDCDAAAALVQP--CDPQSGQCACRPGVSDSSCR 2085
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 50/210 (23%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G+ + C G +C+C+P V G C C ++ F C+ C C
Sbjct: 1417 NNGALPCACHEVGAESDTCERFGGQCRCRPNVIGRDCSMCATGYWGF--PNCRPCNCG-- 1472
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--- 166
+ C+ V G C P + + C+ T+
Sbjct: 1473 -----SRLCEPVTGDC----------------------ICPPRTVLPECTECEPQTFGCH 1505
Query: 167 PL--------GHGGSL--NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
PL H G + ++ C++ G+C+C+ + G +CDRC Y G C+ C+C
Sbjct: 1506 PLVGCEVCNCSHAGIIAPDVSCDTLSGQCRCQNNIVGRQCDRCAPGFY--GYPNCRPCDC 1563
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N AG+ + CD G+C CK+NV+G++C
Sbjct: 1564 NEAGAEEEV--CDQSTGRCLCKENVQGSRC 1591
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 78/185 (42%), Gaps = 18/185 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C+ C G C+ C Y G C A +C+P GS+ GRC+C+ V
Sbjct: 683 GQCV-CLPSVVGLRCDSCAHGAY---GFPNCQAGSCHPAGSVQTTAAPPLGRCECRHHVE 738
Query: 83 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G CD C +++ GC +CECN AG+V C GQC+ G T
Sbjct: 739 GLACDTCKPLYWNLSPDTPEGCSNCECNVAGTVSAVAECAQESGQCQCKPNVCSGTCST- 797
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
F+ + + R C+ D GG++ C G C+C+P V G KC+
Sbjct: 798 ---CKDGFFNLQESDYFGCRGCQCDI-----GGAVGPSCGERSGHCRCRPNVEGPKCNLP 849
Query: 199 DVNHY 203
+HY
Sbjct: 850 RPDHY 854
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 89/235 (37%), Gaps = 48/235 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP--------IGSLNLQCNS-EGRC-QCK 78
C GPNCE+C +Y G+ C P L C+ G C C
Sbjct: 1923 CMPGYAGPNCERCAPGFY---GNPVVLGSRCQPCDCSGNSDPNMLFTDCHPLTGHCLSCM 1979
Query: 79 PGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-----SAQLS 131
G +C+ C +Y C C+C+P G T +CD GQC + L
Sbjct: 1980 HNTAGPRCESCAPGYYGDAINAKNCTQCDCSPCG----TESCDPHSGQCRCKPGVTGLLC 2035
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGV 190
R FD R+C D +L C+ + G+C C+PGV
Sbjct: 2036 DRCE-------DGSFGFDSCSG----CRKCDCDA-----AAALVQPCDPQSGQCACRPGV 2079
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C +C +D+G GCK C+C +CD G+C C D + G QC
Sbjct: 2080 SDSSCRQCAPGFWDYGPNGCKKCDCRGG-------HCDPRTGECRCPDGMTGRQC 2127
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
CQ + G C++C +Y G C C+CN G+ C+ S GRC CK V G +CD
Sbjct: 1536 CQNNIVGRQCDRCAPGFY---GYPNCRPCDCNEAGAEEEVCDQSTGRCLCKENVQGSRCD 1592
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
+C + GC SC C
Sbjct: 1593 QCRDGTFHLDPTNPKGCTSCFC 1614
>gi|397479947|ref|XP_003811261.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-4 [Pan
paniscus]
Length = 1761
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNPPGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 536
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 90/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G ++C G
Sbjct: 989 GECLRCLHNTQGANCQLCKPGHYGSAFNQTCRRCSCHASGVSPMECPPGGGACLCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -RCSECQXNYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCRCREGVSGQRC 1158
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C G G N E+C D YY S C C C
Sbjct: 863 CPCNGFAELC--DPE-------TGSCFNCGGFTTGRNSERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCRPCACN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTQG---ANCQLCKPGHYGSAFNQT--CRRCSCHASG 1028
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
P+ GG L G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1029 VSPMECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS- 1087
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD + GQC CK G +C
Sbjct: 1088 -QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 108/277 (38%), Gaps = 87/277 (31%)
Query: 1 CNCNGFSNRCFFDKEL----YNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C +++ ++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECRPMQKMRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S L S G C+ C+ G CDRC Y
Sbjct: 323 DLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S + DPA
Sbjct: 383 LKTISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 415
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY
Sbjct: 416 LGSV-------------------------AGQCLCKENVEGAKCDQCKPNHYGLSATDPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C+CNP GS+ CD GQC C V GA C
Sbjct: 451 GCQPCDCNPPGSLPFL-TCDVDTGQCLCLSYVTGAHC 486
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 23 GGHCL--------DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EG 73
GG CL C + G C++C D Y+ C +C+C+P S + C+ G
Sbjct: 1038 GGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTSQSSHCDQLTG 1097
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+C CK G G +C C N+Y C C+CN AG+ K P CD G C
Sbjct: 1098 QCPCKLGYGGKRCSECQXNYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMC 1147
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCKP V G CDRC YD
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCHCHPQGSKDTV--CDQVTGQC 836
>gi|312147379|ref|NP_001101707.2| laminin subunit alpha-1 precursor [Rattus norvegicus]
gi|312032315|dbj|BAJ33456.1| laminin, alpha 1 [Rattus norvegicus]
Length = 3083
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 106/237 (44%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C + DG +CE+C D +Y GD C ACNC+ GSL+ C+ E G C CK
Sbjct: 875 GECLKCLWNTDGAHCERCADGFY---GDAVTAKNCRACNCHENGSLSGICHLETGLCDCK 931
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC C C+ GS+ + NC +GQC H
Sbjct: 932 PYVTGQQCDQCLPGYYGLDTGLGCVPCNCSGEGSISD--NCTE-EGQC-----------H 977
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS--------EGRCQCKPG 189
V ++ +C Y +GG C G C C P
Sbjct: 978 CVPGVSGKQ-----------CDQCSHGFYAFQNGGCTPCDCAHTQNNCDPDSGECLCPPH 1026
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC++C+ + E GC++C C+ GS +P CD + GQC CK+ G C
Sbjct: 1027 THGLKCEQCEEAFWGLDPEQGCQACNCSVVGS--TSPQCDVLSGQCSCKEGFGGQSC 1081
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C YY C CNC+ GS++ C EG+C C PGV+G +CD
Sbjct: 929 DCKPYVTGQQCDQCLPGYYGLDTGLGCVPCNCSGEGSISDNCTEEGQCHCVPGVSGKQCD 988
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C Y F GC C+C NCD G+C
Sbjct: 989 QCSHGFYAFQNGGCTPCDC-----AHTQNNCDPDSGEC---------------------- 1021
Query: 148 FDPAGNRIWDLRRCKRDTYPL-----------GHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
P +C+ + L GS + QC+ G+C CK G G C
Sbjct: 1022 LCPPHTHGLKCEQCEEAFWGLDPEQGCQACNCSVVGSTSPQCDVLSGQCSCKEGFGGQSC 1081
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
+C + + F + C C+C+ G++ +T + C G C CK+NV G QC
Sbjct: 1082 HQCSLGYRSFPD--CVPCDCDLRGTLADTCDLEQGLCSCTEDSGTCSCKENVLGPQC 1136
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D ++ N G GG C++C + G NCE C D YY+
Sbjct: 334 CNCHNKAKDCYYDNNVAKERKSLNTAGQYSGGGVCINCLQNTTGINCETCIDQYYRPHKV 393
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C C+C+P+GSL+ C + G+C C+ G GDKCDRC +
Sbjct: 394 SPYEDQPCRPCDCDPVGSLSSVCIKDDLHADLANGKWPGQCPCRKGYAGDKCDRCQFGYR 453
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
F C C+C+ GSV P
Sbjct: 454 GF--PNCVPCDCSTVGSVNEDP 473
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 64/139 (46%), Gaps = 27/139 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
CNCN S+ C D E G CL+C+ G +CE C YY K GD CT
Sbjct: 1410 CNCNNHSDVC--DPE-------TGKCLNCRDHTAGDHCELCTAGYYGKVIGLPGD--CTP 1458
Query: 57 CNC--NPIGSLNLQCNSEGRC-----QCKPGVTGDKCDRCDVNHYDFGEAG---CKSCEC 106
C C +P S + C EG C PG G C+RC ++ A C+ C+C
Sbjct: 1459 CTCPHHPPFSFSPTCVLEGDSGFWCDACLPGYEGQYCERCSAGYHGNPRAAGGSCQKCDC 1518
Query: 107 NPAGSVKNTPNCDSVKGQC 125
NP GSV + +CD GQC
Sbjct: 1519 NPQGSVHS--DCDRASGQC 1535
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C G CE+C + ++ + C ACNC+ +GS + QC+ G+C CK G
Sbjct: 1019 GECL-CPPHTHGLKCEQCEEAFWGLDPEQGCQACNCSVVGSTSPQCDVLSGQCSCKEGFG 1077
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C +C + + F + C C+C+ G++ +T CD +G C
Sbjct: 1078 GQSCHQCSLGYRSFPD--CVPCDCDLRGTLADT--CDLEQGLC 1116
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 105/261 (40%), Gaps = 38/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C C+G S+ C G C C + G +CE+C +Y + C C
Sbjct: 749 CECHGHSSECDIH----------GICSGCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPC 798
Query: 58 NC-------NPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCEC 106
C N + +L E C QC PG +G C+RC +Y C C C
Sbjct: 799 ACPLSIDSNNFSPTCHLTDREEVVCDQCAPGYSGAWCERCADGYYGNPTVPGGTCVPCNC 858
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ +CDSV G+C ++ G H E + F + R C
Sbjct: 859 SGNVDPLEAGHCDSVTGECLKCLWNTDG-AHCE---RCADGFYGDAVTAKNCRACN---- 910
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT 224
GSL+ C+ E G C CKP VTG +CD+C +Y GC C C+ GS+ +
Sbjct: 911 -CHENGSLSGICHLETGLCDCKPYVTGQQCDQCLPGYYGLDTGLGCVPCNCSGEGSISD- 968
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
NC +GQC C V G QC
Sbjct: 969 -NCTE-EGQCHCVPGVSGKQC 987
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C C +G CE+C Y+ ++ C C+CNP GS++ C+ + G+C CKP
Sbjct: 1480 GFWCDACLPGYEGQYCERCSAGYHGNPRAAGGSCQKCDCNPQGSVHSDCDRASGQCVCKP 1539
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G TG C+ C H E+ C SC+ G++ N + DS+ S L+
Sbjct: 1540 GATGLHCEECLPRHI-LMESHCVSCDDECVGALLN--DLDSIGDAVLSLNLA 1588
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ G GDKCDRC + F C C+C+ GSV P + C CK NVE
Sbjct: 432 GQCPCRKGYAGDKCDRCQFGYRGF--PNCVPCDCSTVGSVNEDPCTEP----CLCKKNVE 485
Query: 242 GAQC 245
G C
Sbjct: 486 GENC 489
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C PG G C+RC ++ A C+ C+CNP GSV + +CD GQC CK G
Sbjct: 1486 CLPGYEGQYCERCSAGYHGNPRAAGGSCQKCDCNPQGSVHS--DCDRASGQCVCKPGATG 1543
Query: 243 AQC 245
C
Sbjct: 1544 LHC 1546
>gi|297274994|ref|XP_001118617.2| PREDICTED: laminin subunit alpha-1-like [Macaca mulatta]
Length = 3079
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 106/237 (44%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GS + C+ E G C CK
Sbjct: 872 GECLKCLGNTDGAHCERCADGFY---GDAVTAKNCRACRCHAKGSHSAVCHLETGLCDCK 928
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC+ C C+ AGSV + +C +GQC
Sbjct: 929 PNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--DCTD-EGQCHCVP-------- 977
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC R Y G C+ E G C C P
Sbjct: 978 -----------GVAGKRC---DRCARGFYAYQDGSCTPCDCPHTRNTCDPETGECVCPPH 1023
Query: 190 VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +C+ C+ H+ + E GC++C C+ GS + CD V G+C+C G C
Sbjct: 1024 TQGARCEECEDGHWGYDVEVGCQACNCSLVGSSHH--QCDVVSGRCQCNWKFGGRAC 1078
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D K+ N G GG C +C + G NCE C D YY+
Sbjct: 331 CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCTNCLQNTMGINCETCIDGYYRPHKV 390
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C C+C+P+GSL+ C + G+C CK G G+KCDRC + +
Sbjct: 391 SPYEDEPCRPCDCDPVGSLSSVCVKDDLHSDLRNGKGPGQCPCKEGYAGEKCDRCQLGYK 450
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
D+ C SC CNP GS + P
Sbjct: 451 DY--PACVSCGCNPVGSASDEP 470
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G+KCDRC + + D+ C SC CNP GS + P G C CK+NVE
Sbjct: 429 GQCPCKEGYAGEKCDRCQLGYKDY--PACVSCGCNPVGSASDEP----CTGPCVCKENVE 482
Query: 242 GAQC 245
G C
Sbjct: 483 GKAC 486
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 103/240 (42%), Gaps = 32/240 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCTACNCNPIGSLN-------LQCNS 71
G C+ C + G +CE+C +Y + GD C C C + N L
Sbjct: 759 GICIACAHNTTGDHCERCLPGFYGEPSRGTPGD--CQPCACPLTIASNNFSPTCHLNDGD 816
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
E C QC PG +G C+RC +Y C C+C+ +CDSV G+C
Sbjct: 817 EVVCDQCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPSEAGHCDSVTGECLK 876
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ GS + C+ E G C C
Sbjct: 877 CLGNTDG-AHCE---RCADGFYGDAVTAKNCRACRCHA-----KGSHSAVCHLETGLCDC 927
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KP VTG +CD+C +Y GC+ C C+ AGSV + +C +GQC C V G +C
Sbjct: 928 KPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--DCTD-EGQCHCVPGVAGKRC 984
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C G CE+C D ++ + C ACNC+ +GS + QC+ GRCQC
Sbjct: 1016 GECV-CPPHTQGARCEECEDGHWGYDVEVGCQACNCSLVGSSHHQCDVVSGRCQCNWKFG 1074
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD+C + + DF + C C+C+ G+
Sbjct: 1075 GRACDQCSLGYRDFPD--CVPCDCDLRGT 1101
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H C C +G +CE+C YY Q G + C C+CN GS++ C+ + G+C C
Sbjct: 1476 HNFRCDACLLGYEGQHCERCSLGYYGNPQTLGGS-CQKCDCNLHGSVHGDCDRTSGQCVC 1534
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
+ G +G +CD C+ H E C SC+ G + N + D + G S L+
Sbjct: 1535 RLGASGLRCDECEPRHI-LMETDCVSCDDECVGVLLN--DLDEIGGAILSLNLT 1585
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C+CN S+ C D G CL+C + G +C+ C YY K + C C
Sbjct: 1407 CSCNNHSDTCDPDT---------GKCLNCGDNTAGDHCDVCAFGYYGKVTGSASDCALCV 1457
Query: 59 C--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C +P S + C EG RC C G G C+RC + +Y + C+ C+CN
Sbjct: 1458 CPHSPPASFSPTCVLEGDHNFRCDACLLGYEGQHCERCSLGYYGNPQTLGGSCQKCDCNL 1517
Query: 109 AGSVKNTPNCDSVKGQC 125
GSV +CD GQC
Sbjct: 1518 HGSVHG--DCDRTSGQC 1532
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN---- 226
GS + QC+ GRCQC G CD+C + + DF + C C+C+ G+ + N
Sbjct: 1054 GSSHHQCDVVSGRCQCNWKFGGRACDQCSLGYRDFPD--CVPCDCDLRGTSGDACNLEQG 1111
Query: 227 ---CDSVKGQCECKDNVEGAQC 245
C G C CK+NV G QC
Sbjct: 1112 LCGCAEETGACPCKENVSGPQC 1133
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNSEGRCQCKPGVTGDKCD 87
C+ G C++C+ Y C +C CNP+GS + + C G C CK V G CD
Sbjct: 433 CKEGYAGEKCDRCQLGYKDYPA---CVSCGCNPVGSASDEPCT--GPCVCKENVEGKACD 487
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
RC Y+ E GC C C
Sbjct: 488 RCKPGFYNLKEKNPQGCSECFC 509
>gi|312032317|dbj|BAJ33457.1| laminin, alpha 1 [Rattus norvegicus]
Length = 3083
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 106/237 (44%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C + DG +CE+C D +Y GD C ACNC+ GSL+ C+ E G C CK
Sbjct: 875 GECLKCLWNTDGAHCERCADGFY---GDAVTAKNCRACNCHENGSLSGICHLETGLCDCK 931
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC C C+ GS+ + NC +GQC H
Sbjct: 932 PYVTGQQCDQCLPGYYGLDTGLGCVPCNCSGEGSISD--NCTE-EGQC-----------H 977
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS--------EGRCQCKPG 189
V ++ +C Y +GG C G C C P
Sbjct: 978 CVPGVSGKQ-----------CDQCSHGFYAFQNGGCTPCDCAHTQNNCDPDSGECLCPPH 1026
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC++C+ + E GC++C C+ GS +P CD + GQC CK+ G C
Sbjct: 1027 THGLKCEQCEEAFWGLDPEQGCQACNCSVVGS--TSPQCDVLSGQCSCKEGFGGQSC 1081
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C YY C CNC+ GS++ C EG+C C PGV+G +CD
Sbjct: 929 DCKPYVTGQQCDQCLPGYYGLDTGLGCVPCNCSGEGSISDNCTEEGQCHCVPGVSGKQCD 988
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C Y F GC C+C NCD G+C
Sbjct: 989 QCSHGFYAFQNGGCTPCDC-----AHTQNNCDPDSGEC---------------------- 1021
Query: 148 FDPAGNRIWDLRRCKRDTYPL-----------GHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
P +C+ + L GS + QC+ G+C CK G G C
Sbjct: 1022 LCPPHTHGLKCEQCEEAFWGLDPEQGCQACNCSVVGSTSPQCDVLSGQCSCKEGFGGQSC 1081
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
+C + + F + C C+C+ G++ +T + C G C CK+NV G QC
Sbjct: 1082 HQCSLGYRSFPD--CVPCDCDLRGTLADTCDLEQGLCSCTEDSGTCSCKENVLGPQC 1136
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D ++ N G GG C++C + G NCE C D YY+
Sbjct: 334 CNCHNKAKDCYYDNNVAKERKSLNTAGQYSGGGVCINCLQNTTGINCETCIDQYYRPHKV 393
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C C+C+P+GSL+ C + G+C C+ G GDKCDRC +
Sbjct: 394 SPYEDQPCRPCDCDPVGSLSSVCIKDDLHADLANGKWPGQCPCRKGYAGDKCDRCQFGYR 453
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
F C C+C+ GSV P
Sbjct: 454 GF--PNCVPCDCSTVGSVNEDP 473
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
CNCN S+ C D E G CL+C+ G +CE C YY K GD CT
Sbjct: 1410 CNCNNHSDVC--DPE-------TGKCLNCRDHTAGDHCELCAAGYYGKVIGLPGD--CTP 1458
Query: 57 CNC--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHYDFGEAG---CKSCEC 106
C C +P S + C EG RC C PG G C+RC ++ A C+ C+C
Sbjct: 1459 CTCPHHPPFSFSPTCVLEGDSGFRCDACLPGYEGQYCERCSAGYHGNPRAAGGSCQKCDC 1518
Query: 107 NPAGSVKNTPNCDSVKGQC 125
NP GSV + +CD GQC
Sbjct: 1519 NPQGSVHS--DCDRASGQC 1535
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C G CE+C + ++ + C ACNC+ +GS + QC+ G+C CK G
Sbjct: 1019 GECL-CPPHTHGLKCEQCEEAFWGLDPEQGCQACNCSVVGSTSPQCDVLSGQCSCKEGFG 1077
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C +C + + F + C C+C+ G++ +T CD +G C
Sbjct: 1078 GQSCHQCSLGYRSFPD--CVPCDCDLRGTLADT--CDLEQGLC 1116
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 105/261 (40%), Gaps = 38/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C C+G S+ C G C C + G +CE+C +Y + C C
Sbjct: 749 CECHGHSSECDIH----------GICSGCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPC 798
Query: 58 NC-------NPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCEC 106
C N + +L E C QC PG +G C+RC +Y C C C
Sbjct: 799 ACPLSIDSNNFSPTCHLTDREEVVCDQCAPGYSGAWCERCADGYYGNPTVPGGTCVPCNC 858
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ +CDSV G+C ++ G H E + F + R C
Sbjct: 859 SGNVDPLEAGHCDSVTGECLKCLWNTDG-AHCE---RCADGFYGDAVTAKNCRACN---- 910
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT 224
GSL+ C+ E G C CKP VTG +CD+C +Y GC C C+ GS+ +
Sbjct: 911 -CHENGSLSGICHLETGLCDCKPYVTGQQCDQCLPGYYGLDTGLGCVPCNCSGEGSISD- 968
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
NC +GQC C V G QC
Sbjct: 969 -NCTE-EGQCHCVPGVSGKQC 987
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C C +G CE+C Y+ ++ C C+CNP GS++ C+ + G+C CKP
Sbjct: 1480 GFRCDACLPGYEGQYCERCSAGYHGNPRAAGGSCQKCDCNPQGSVHSDCDRASGQCVCKP 1539
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G TG C+ C H E+ C SC+ G++ N + DS+ S L+
Sbjct: 1540 GATGLHCEECLPRHI-LMESHCVSCDDECVGALLN--DLDSIGDAVLSLNLA 1588
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 167 PLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVK 222
P + L+ +S RC C PG G C+RC ++ A C+ C+CNP GSV
Sbjct: 1466 PFSFSPTCVLEGDSGFRCDACLPGYEGQYCERCSAGYHGNPRAAGGSCQKCDCNPQGSVH 1525
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ +CD GQC CK G C
Sbjct: 1526 S--DCDRASGQCVCKPGATGLHC 1546
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ G GDKCDRC + F C C+C+ GSV P + C CK NVE
Sbjct: 432 GQCPCRKGYAGDKCDRCQFGYRGF--PNCVPCDCSTVGSVNEDPCTEP----CLCKKNVE 485
Query: 242 GAQC 245
G C
Sbjct: 486 GENC 489
>gi|410916825|ref|XP_003971887.1| PREDICTED: laminin subunit alpha-2-like [Takifugu rubripes]
Length = 3091
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 106/238 (44%), Gaps = 52/238 (21%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ + G C+ C + + C C+CN GS + C+ G+C+C+PGVTG KCDR
Sbjct: 922 CKENVIGRKCDTCLSQTHGLNTRGVCAPCHCNSFGSKSFDCDEMGQCRCQPGVTGPKCDR 981
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C ++F E GC CEC+ G+ NCD+ GQC
Sbjct: 982 CARGFFNFQEGGCTPCECSHVGN-----NCDTNTGQCICPP------------------- 1017
Query: 149 DPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGDK 194
+ G R RC + + GH GS++ QCN + G C C+ G+K
Sbjct: 1018 NTIGERC---DRCAPNHW--GHDIVTGCKECGCSAIGSVSQQCNVNTGCCSCRDTYRGEK 1072
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNT--PN-----CDSVKGQCECKDNVEGAQC 245
C+ C + DF + C CEC+ +GS T P C G+C CK NVEG C
Sbjct: 1073 CNECRIGFRDFPQ--CTQCECHFSGSDSQTCDPETQVCACADRTGKCSCKTNVEGHSC 1128
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 116/259 (44%), Gaps = 50/259 (19%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCL--DCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNC 59
N FS C K GG L C+ GP C++C + Y+ + C C+C
Sbjct: 799 NSFSPTCHLSK--------GGELLCDQCEPGYTGPRCDRCYNGYFGQPSVPGGSCQPCHC 850
Query: 60 NPIGSLNLQCNSE-----GRC-QCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGS 111
+ G+L+L GRC +C+ G G CD C +Y A C+ C+C+ GS
Sbjct: 851 H--GNLDLSTPDSCDPVTGRCLRCRQGYGGADCDSCAEGYYGDATAARNCQPCQCHTNGS 908
Query: 112 VKNTPNCDSVKGQCESAQLSSRGR-----VHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ C GQC+ + + GR + + +R P C +++
Sbjct: 909 LSEI--CSQETGQCQCKE-NVIGRKCDTCLSQTHGLNTRGVCAP----------CHCNSF 955
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
GS + C+ G+C+C+PGVTG KCDRC ++F E GC CEC+ G+ N
Sbjct: 956 -----GSKSFDCDEMGQCRCQPGVTGPKCDRCARGFFNFQEGGCTPCECSHVGN-----N 1005
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD+ GQC C N G +C
Sbjct: 1006 CDTNTGQCICPPNTIGERC 1024
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 100/234 (42%), Gaps = 39/234 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G CL C+ G +C+ C + YY + C C C+ GSL+ C+ E G+CQCK V
Sbjct: 867 GRCLRCRQGYGGADCDSCAEGYYGDATAARNCQPCQCHTNGSLSEICSQETGQCQCKENV 926
Query: 82 TGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G KCD C + G C C CN GS + +CD + GQC
Sbjct: 927 IGRKCDTCLSQTHGLNTRGVCAPCHCNSFGS--KSFDCDEM-GQC--------------- 968
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTG 192
R Q G RC R + GG +C+ + G+C C P G
Sbjct: 969 RCQ-------PGVTGPKCDRCARGFFNFQEGGCTPCECSHVGNNCDTNTGQCICPPNTIG 1021
Query: 193 DKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++CDRC NH+ GCK C C+ GSV C+ G C C+D G +C
Sbjct: 1022 ERCDRCAPNHWGHDIVTGCKECGCSAIGSVSQ--QCNVNTGCCSCRDTYRGEKC 1073
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 105/247 (42%), Gaps = 46/247 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGD------NFCTACNCNPIGSLNLQCN----SEG 73
GHCLDC GP+C+ C YY + CT P S + C+ E
Sbjct: 754 GHCLDCIHHTTGPHCDTCLPGYYGNTTHGSPADCQLCTCPLSLPSNSFSPTCHLSKGGEL 813
Query: 74 RC-QCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C QC+PG TG +CDRC N Y FG+ C+ C C+ + +CD V G+C
Sbjct: 814 LCDQCEPGYTGPRCDRC-YNGY-FGQPSVPGGSCQPCHCHGNLDLSTPDSCDPVTGRC-- 869
Query: 128 AQLSSRGRVHTELRVQSRKNF-----DPAGNRIWDLRRCKRDTYPLG--HGGSLNLQCNS 180
++ R+ + D + R+ P GSL+ C+
Sbjct: 870 --------------LRCRQGYGGADCDSCAEGYYGDATAARNCQPCQCHTNGSLSEICSQ 915
Query: 181 E-GRCQCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKD 238
E G+CQCK V G KCD C + G C C CN GS + +CD + GQC C+
Sbjct: 916 ETGQCQCKENVIGRKCDTCLSQTHGLNTRGVCAPCHCNSFGS--KSFDCDEM-GQCRCQP 972
Query: 239 NVEGAQC 245
V G +C
Sbjct: 973 GVTGPKC 979
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C+FD+ + + + GG C+ C G NCE C +Y+ G
Sbjct: 329 CNCHGKAEECYFDQRVADLSLSLDIRGQRRGGGVCVGCSDYTAGTNCETCIPGFYRPVGV 388
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
+N C C+C+ GS+ C + G C CK G G +CDRC V + F
Sbjct: 389 SADEENPCIPCSCDSDGSVKQSCVPDSDQATPSQPPGSCWCKEGFGGLRCDRCAVGYMGF 448
Query: 97 GEAGCKSCECNPAGSVKNTP 116
C+ C C+ GS P
Sbjct: 449 --PFCQRCNCSIDGSTNEDP 466
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 100/232 (43%), Gaps = 47/232 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C+CN F ++ F E+ G C CQ GP C++C ++ Q+ G CT C
Sbjct: 950 CHCNSFGSKSFDCDEM-------GQC-RCQPGVTGPKCDRCARGFFNFQEGG---CTPCE 998
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPN 117
C+ +G+ N N+ G+C C P G++CDRC NH+ GCK C C+ GSV N
Sbjct: 999 CSHVGN-NCDTNT-GQCICPPNTIGERCDRCAPNHWGHDIVTGCKECGCSAIGSVSQQCN 1056
Query: 118 CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNL 176
++ C S + + RG E R+ R D +C + + + GS +
Sbjct: 1057 VNT---GCCSCRDTYRGEKCNECRIGFR-----------DFPQCTQCECH---FSGSDSQ 1099
Query: 177 QCNSE----------GRCQCKPGVTGDKCDRCDVNHYDFG---EAGCKSCEC 215
C+ E G+C CK V G C C + + GC C C
Sbjct: 1100 TCDPETQVCACADRTGKCSCKTNVEGHSCGACKPSTFGLSVKNPLGCSRCYC 1151
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G +CDRC V + F C+ C C S+ + N D C CK+NVE
Sbjct: 425 GSCWCKEGFGGLRCDRCAVGYMGF--PFCQRCNC----SIDGSTNEDPCVTPCVCKENVE 478
Query: 242 GAQC 245
G C
Sbjct: 479 GENC 482
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNSEGRCQCKPGVTGDKCDRCDVNH 93
G C++C Y G FC CNC+ GS N C + C CK V G+ CDRC +
Sbjct: 435 GLRCDRCAVGYM---GFPFCQRCNCSIDGSTNEDPCVTP--CVCKENVEGENCDRCKLGF 489
Query: 94 YDFGEA---GCKSCECNPAGSV 112
Y+ A GC+ C C S+
Sbjct: 490 YNLHRANQRGCEKCSCMGVSSL 511
>gi|395818435|ref|XP_003782634.1| PREDICTED: laminin subunit beta-4 [Otolemur garnettii]
Length = 1757
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 104/267 (38%), Gaps = 84/267 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CNG S+RC FD Y +G GG C DC +G +C++CR +Y+ S +
Sbjct: 331 CRCNGHSDRCHFDLSAYLASGSRSGGVCEDCGHHTEGQHCDRCRPGFYRDPRRAASDPHA 390
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C AC C+P G+++ + G+C CK V G CD+C +H+ + G
Sbjct: 391 CAACECDPDGTISGGICVSHSDPTSGSVLGQCLCKENVEGANCDQCKPHHFGLSASDPLG 450
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C CNP GS+ L
Sbjct: 451 CQPCNCNPFGSLP--------------------------------------------LST 466
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPA 218
C DT G+C C+ TG +CD C ++ G GC C+C+
Sbjct: 467 CDMDT----------------GQCLCQSYATGPRCDECTAGYWGLGNHLHGCSPCDCDIG 510
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ N C GQC C+ +V G C
Sbjct: 511 GAYSNM--CSPRDGQCSCRPHVAGRSC 535
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 47/270 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C+G G NCE+C D YY S C C C
Sbjct: 862 CPCNGFAELC--DPE-------TGSCFNCRGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 912
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
+ S N +S+ C C G G +C C Y A C+ C CN
Sbjct: 913 PDVPSSNQYFAHSCYQNPWSSDVICNCLQGYLGIQCKECSAGFYRNPKLSGAPCQPCACN 972
Query: 108 PAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRK-NFDPAGNRIWD 157
V + +C V G+C + QL G + L R+ + P+G
Sbjct: 973 NNIDVTDPESCSPVTGECLRCLHNTWGPNCQLCKPGYFGSALNQTCRRCSCHPSG----- 1027
Query: 158 LRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCEC 215
P G G C+ G C C P VTG CD C +++ GC+ C C
Sbjct: 1028 ---VNPAVCPPGGGAC---PCDPVTGECPCLPHVTGLGCDHCADGYWNLVPGRGCQPCNC 1081
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+P S + +CD + GQC CK G QC
Sbjct: 1082 DPWNS--QSSHCDQLTGQCPCKVGYGGRQC 1109
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 87/233 (37%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + GPNC+ C+ Y+ + + C C+C+P G C G
Sbjct: 988 GECLRCLHNTWGPNCQLCKPGYFGSALNQTCRRCSCHPSGVNPAVCPPGGGACPCDPVTG 1047
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CD C +++ GC+ C C+P S + +CD + GQC
Sbjct: 1048 ECPCLPHVTGLGCDHCADGYWNLVPGRGCQPCNCDPWNS--QSSHCDQLTGQCP------ 1099
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK +G+GG
Sbjct: 1100 ----------------------------CK-----VGYGGR------------------- 1107
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C N+Y + C C+CN G+ K P CD G C C++ V G QC
Sbjct: 1108 -QCSECMENYYGDPQKRCIPCDCNREGAKK--PVCDPDTGMCHCREGVSGQQC 1157
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCK GVTG CDRC Y
Sbjct: 750 CERLMVSTSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKHGVTGRCCDRCSTGSYGL 808
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC SC C+P GS KNT CD + GQC
Sbjct: 809 GHHGCHSCHCHPQGS-KNT-VCDQLTGQC 835
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCK GVTG CDRC Y G GC SC C+P GS KNT CD + GQC C V
Sbjct: 785 GQCQCKHGVTGRCCDRCSTGSYGLGHHGCHSCHCHPQGS-KNT-VCDQLTGQCLCYGEVA 842
Query: 242 GAQC 245
G +C
Sbjct: 843 GRRC 846
>gi|403277507|ref|XP_003930400.1| PREDICTED: usherin [Saimiri boliviensis boliviensis]
Length = 5203
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 33/267 (12%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--- 52
C CN S C ++ + + G GG C DC+ + G NCE C+D ++++ G +
Sbjct: 575 CQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGADPSA 634
Query: 53 --FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C +C+C+ +G+ N + C+ G +C CK V+G +C++C Y+ E GC C
Sbjct: 635 IDVCKSCDCDKVGTRNGSILCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPC 694
Query: 105 ECNPAGSVKNTPNCDSVKGQ--CESAQLSSR-GRVHTELRVQSRKNFDPAGNRIWDLRRC 161
CN +G+V C GQ C++ + R R + + N D C
Sbjct: 695 NCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDRCNFGFKFLRSFNDD-------GCEAC 747
Query: 162 KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
+ + + GS+N CN G+C+CK G CD C N Y CK+C+C+ AGS
Sbjct: 748 QCNLH-----GSVNNFCNPLSGQCECKNEAKGLHCDTCRENFYGLDVTNCKACDCDTAGS 802
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ T C++ GQC CK NV G QC +
Sbjct: 803 LPGT-VCNAKTGQCICKPNVGGRQCNT 828
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 123/236 (52%), Gaps = 28/236 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCNS-EGRCQC 77
GG C +C+ G C +C++ +Y Q+ + C+ CNCN G+++ + C+ G+C+C
Sbjct: 659 GGQC-NCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQNSGQCKC 717
Query: 78 KPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G +CDRC+ F + GC++C+CN GSV N C+ + GQCE ++G
Sbjct: 718 KANVIGLRCDRCNFGFKFLRSFNDDGCEACQCNLHGSVNNF--CNPLSGQCECKN-EAKG 774
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL-NLQCNSE-GRCQCKPGVTG 192
+H + R+NF G + + + C DT GSL CN++ G+C CKP V G
Sbjct: 775 -LHCD---TCRENF--YGLDVTNCKACDCDT-----AGSLPGTVCNAKTGQCICKPNVGG 823
Query: 193 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+ C ++ + C C C+ G++ + CD GQC CK V G +C
Sbjct: 824 RQCNTCLERNFYLRQNNSFLCLPCNCDKTGTINGSLLCDKSTGQCPCKLGVTGLRC 879
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 121/251 (48%), Gaps = 56/251 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C C + N+Y + ++F C CNC+ G++N L C+ S G+C CK
Sbjct: 813 GQCI-CKPNVGGRQCNTCLERNFYLRQNNSFLCLPCNCDKTGTINGSLLCDKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQSCQMCECDSLGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCK--RDTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTAGAVNHICNS 965
Query: 181 -EGRCQCKPGVT-GDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ T G CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASTAGQHCDQCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQCRS 247
K V G++C +
Sbjct: 1024 KQFVTGSKCEA 1034
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQSCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y G A GC C C+ AG+V + C+S+ GQC S+ G+ H +
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTAGAVNHI--CNSLTGQCVCQDASTAGQ-HCDQCK 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KC+ C
Sbjct: 987 DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCEACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G +C++C+D+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCVCQDASTAGQHCDQCKDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KC+ C +H D
Sbjct: 1026 FVTGSKCEACVPSASHLD 1043
>gi|348521268|ref|XP_003448148.1| PREDICTED: laminin subunit beta-1-like [Oreochromis niloticus]
Length = 1779
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 99/230 (43%), Gaps = 44/230 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNF 53
C CN S C FD +Y +G+ GG C DCQ + G CE+C +YQ N
Sbjct: 333 CECNQHSTSCHFDLAVYVASGNVSGGVCDDCQHNTLGRLCEQCAPFFYQHPSRNLRDPNI 392
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--GC 101
C CNC P GSL + G+C+CK V G++CD C HY G+ GC
Sbjct: 393 CEPCNCEPAGSLEGGLCDPRTDVIAGLISGQCRCKANVEGERCDHCRQGHYGLGQGPHGC 452
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--- 158
C CNP G + CDS G+C R+ N D + W L
Sbjct: 453 LPCTCNPLGMLPGGNPCDSGTGRCFCK------------RLVEGHNCDQCRPQHWGLSND 500
Query: 159 ----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG++N C+ G+C C+ + G +CD+ + +Y
Sbjct: 501 MDGCRPCDCD-----QGGAVNNDCDPHTGQCVCREHMFGRRCDQVESGYY 545
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE---------GR 74
G CL C G C+ C+ YY + C C C +G++ C+S G+
Sbjct: 987 GTCLKCLYHTQGDGCQHCKLGYYGNAATQSCRKCTCYSVGTIPYACSSPDECQCDQRSGQ 1046
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQC 125
C C P V G CDRC + ++ GC+ C+C+P S K++ C V GQC
Sbjct: 1047 CPCLPNVVGQNCDRCAPDTWNLASGTGCQRCDCDPVHSFKSS--CHEVTGQC 1096
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 30 QGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKC 86
Q P + C+ + S AC C+P GSL+ C+ G +CQC+ + G C
Sbjct: 736 QSIIKSPMTDICKQYIFSASALLHKGAMACQCDPQGSLSSLCDPNGGQCQCRHNIAGRNC 795
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
DRC + FG AGC+ C C+P GSV C G CE
Sbjct: 796 DRCAPATFLFGPAGCRPCNCDPLGSVSAL--CHEATGHCE 833
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 113/272 (41%), Gaps = 48/272 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRD---GPNCEKCRDNYY---QKSGDNFC 54
C CNG S C + +TG +CQG RD G +CE+C Y+ + +C
Sbjct: 859 CQCNGHSEYC------HPQTG------ECQGCRDFTTGHHCERCLSGYHGDPELGSGGYC 906
Query: 55 TACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGEAG-C 101
C C P G + L ++ C C PG G +CD C ++ G C
Sbjct: 907 RPCMC-PDGPRSGRQFADSCYLLPNTNQLVCVCSPGYKGVRCDECAPGYFGNPLVPGGRC 965
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--VHTELRVQSRKNFDPAGNRIWDLR 159
C+CN + + +CD+ G C ++G H +L + A + R
Sbjct: 966 MPCQCNNNIDMHDPDSCDARTGTCLKCLYHTQGDGCQHCKL-----GYYGNAATQ--SCR 1018
Query: 160 RC---KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCE 214
+C T P QC+ G+C C P V G CDRC + ++ GC+ C+
Sbjct: 1019 KCTCYSVGTIPYACSSPDECQCDQRSGQCPCLPNVVGQNCDRCAPDTWNLASGTGCQRCD 1078
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C+P S K++ C V GQC CK G CR
Sbjct: 1079 CDPVHSFKSS--CHEVTGQCMCKPGFGGRTCR 1108
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 96/247 (38%), Gaps = 51/247 (20%)
Query: 40 KCRDNYYQKSGDN------FCT--ACNCNPI--GSLNLQCNSEGRCQCKPGVTGDKCDRC 89
+ +D YY D FC A C P+ + + GRC C G C+RC
Sbjct: 251 EVKDKYYYALYDMVVRGNCFCYGHASECAPVDGAPTSAEGMVHGRCVCNHNTEGLNCERC 310
Query: 90 DVNHYDF--------GEAGCKSCECNPAGS------VKNTPNCDSVKGQCESAQLSSRGR 135
++D CK CECN + + + G C+ Q ++ GR
Sbjct: 311 QDFYHDLPWRPAEGRNTHACKKCECNQHSTSCHFDLAVYVASGNVSGGVCDDCQHNTLGR 370
Query: 136 V----------HTELRVQSRK-----NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+ H ++ N +PAG+ L + D G ++
Sbjct: 371 LCEQCAPFFYQHPSRNLRDPNICEPCNCEPAGSLEGGLCDPRTDVI----AGLIS----- 421
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G++CD C HY G+ GC C CNP G + CDS G+C CK
Sbjct: 422 -GQCRCKANVEGERCDHCRQGHYGLGQGPHGCLPCTCNPLGMLPGGNPCDSGTGRCFCKR 480
Query: 239 NVEGAQC 245
VEG C
Sbjct: 481 LVEGHNC 487
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 19/220 (8%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + G NC++C + G C CNC+P+GS++ C+ + G C+C PG
Sbjct: 781 GGQC-QCRHNIAGRNCDRCAPATF-LFGPAGCRPCNCDPLGSVSALCHEATGHCECVPGA 838
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
TG +C C + F C+ C+CN ++ C G+C+ + + G H E R
Sbjct: 839 TGRQCSHCLPGFWGFPH--CRPCQCN-----GHSEYCHPQTGECQGCRDFTTGH-HCE-R 889
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLG---HGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
S + DP R C P S L N+ + C C PG G +CD
Sbjct: 890 CLSGYHGDPELGSGGYCRPCMCPDGPRSGRQFADSCYLLPNTNQLVCVCSPGYKGVRCDE 949
Query: 198 CDVNHY--DFGEAG-CKSCECNPAGSVKNTPNCDSVKGQC 234
C ++ G C C+CN + + +CD+ G C
Sbjct: 950 CAPGYFGNPLVPGGRCMPCQCNNNIDMHDPDSCDARTGTC 989
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 71/189 (37%), Gaps = 43/189 (22%)
Query: 76 QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVK---NTPN---CDSVKGQCESA 128
+C GD C C + +Y + C+ C C G++ ++P+ CD GQC
Sbjct: 991 KCLYHTQGDGCQHCKLGYYGNAATQSCRKCTCYSVGTIPYACSSPDECQCDQRSGQCPC- 1049
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-----------SLNLQ 177
L +N D RC DT+ L G S
Sbjct: 1050 -----------LPNVVGQNCD----------RCAPDTWNLASGTGCQRCDCDPVHSFKSS 1088
Query: 178 CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
C+ G+C CKPG G C C + E C +C+C+ G ++ C GQC C
Sbjct: 1089 CHEVTGQCMCKPGFGGRTCRECKELFWGNPEVKCYACDCDHRGI--SSEQCHRATGQCTC 1146
Query: 237 KDNVEGAQC 245
+ V G +C
Sbjct: 1147 VEGVTGPRC 1155
>gi|332237974|ref|XP_003268179.1| PREDICTED: laminin subunit beta-4 [Nomascus leucogenys]
Length = 1761
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD Y +G GG C DCQ + +G +C+ CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDHCRPVFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPTLGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNPLGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
C D GG+ + C+ + G+C+C+P VTG C V Y F E A
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSCSE-PVPGYFFAPLNFYLYEAEEAT 559
Query: 220 SVK 222
++
Sbjct: 560 PLQ 562
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 113/267 (42%), Gaps = 41/267 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CPCNGFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 914 PNDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGAQCGECSTGFYGNPRISGAPCRPCACN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC------ 161
V + +C V G+C +++G T ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTQG---TNCQLCKPGHYGSALNQT--CRRCSCHASG 1028
Query: 162 -KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPA 218
P G G L C+ G C C P VTG CDRC +++ GC+SC+C+P
Sbjct: 1029 VSPTECPPGGGACL---CDPVTGACPCLPNVTGLSCDRCADGYWNLVPGRGCQSCDCDPR 1085
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
S + +CD + GQC CK G +C
Sbjct: 1086 TS--QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 89/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G +C G
Sbjct: 989 GECLRCLHNTQGTNCQLCKPGHYGSALNQTCRRCSCHASGVSPTECPPGGGACLCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPNVTGLSCDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -RCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCRCREGVSGQRC 1158
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 103/278 (37%), Gaps = 87/278 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHG-----GHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C ++++ G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECRPMQKVWGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S L S G C+ C+ G CD C Y
Sbjct: 323 DLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDHCRPVFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S + G V
Sbjct: 383 LKTISDPYACIPCECDPDGTISG--------GICVSHSDPTLGSV--------------- 419
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
G+C CK V G KCD+C NHY
Sbjct: 420 -----------------------------AGQCLCKENVEGAKCDQCKPNHYGLSATDPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GC+ C+CNP GS+ CD GQC C V GA C
Sbjct: 451 GCQPCDCNPLGSLPFL-TCDVDTGQCLCLSYVTGAHCE 487
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCKP V G CDRC YD
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCRCHPQGSKDTV--CDQVTGQC 836
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 65/167 (38%), Gaps = 42/167 (25%)
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
P V C+R ++ G +C+C+P GSV ++ C + GQC+ L
Sbjct: 744 PQVLPGACERLIISMSAKLHDGAVACKCHPQGSVGSS--CSRLGGQCQCKPL-------- 793
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-----------GRCQCK 187
R D RC +Y LGH G +C+ + G+C C
Sbjct: 794 ------------VVGRCCD--RCSTGSYDLGHHGCHPCRCHPQGSKDTVCDQVTGQCPCH 839
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
V+G +CDRC + FG C+ C CN + CD G C
Sbjct: 840 GEVSGRRCDRCLAGY--FGFPSCRPCPCNGFAEL-----CDPETGSC 879
>gi|380022480|ref|XP_003695073.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-1-like [Apis
florea]
Length = 1773
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 34/225 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN +N C FD+ +Y R+G GG C DCQ + G NCE C+ YY +
Sbjct: 339 CNCNNHTNSCHFDETVYERSGRVSGGVCDDCQHNTRGQNCELCKPFYYHDVTKDISHSEA 398
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C C+C+ GSL+ L + GRC CK V G +C+ C +++F G
Sbjct: 399 CLPCDCDLGGSLDDGICDSRTDILSGDESGRCHCKANVEGRRCNHCKYGYWNFDPENPEG 458
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C CN G++ N C+ V G+C + + + L + DP G
Sbjct: 459 CQACTCNTLGTIDNR-GCNMVTGECTCKRFVTARDCNQCLPEFWGLSEDPDG-------- 509
Query: 161 CKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
CK D P GGS C+ G+C+C+P V+G C++ + ++Y
Sbjct: 510 CKPCDCDP---GGSYENSCDVITGQCRCRPHVSGRTCNQPEQSYY 551
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCK 78
H G CL C + DG NC+ C+ +Y + + C C C+ +G+ + G+C C
Sbjct: 993 HTGRCLQCLYNTDGSNCQICKPGFYGNALEQDCQDCQCDVLGTDRNAGPCDHRTGQCPCL 1052
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CD C+ NH+ GC CEC+ GSV ++ C+ G CE R +
Sbjct: 1053 PHVIGLLCDSCEENHWRIASGQGCDPCECDAVGSVSDS--CNPYDGTCECRPGFGGRRCN 1110
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ + NF GN + C D GS + QC+ E G C C G+ G+KCD
Sbjct: 1111 -----ECQTNF--WGNPNVECYPCDCDL-----TGSASQQCDRETGTCICHKGIGGEKCD 1158
Query: 197 RCDVNHYDFGEAGCKSCECNPAG 219
+CD +Y + +CNP G
Sbjct: 1159 QCDRGYYGYAP------QCNPCG 1175
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 97/218 (44%), Gaps = 39/218 (17%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
YY G + +C CNP GS +L C S G C CKP V G +CDRC Y FG GC
Sbjct: 764 YYAYDGAH---SCECNPTGSHSLLCGSYGGICPCKPNVVGRRCDRCAPGTYGFGPEGCIP 820
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV--QSRKNFDPAGNRIWDLRRC 161
C+C+ G++ N CD G+C + R +T R Q F W+ C
Sbjct: 821 CDCDGVGALDNF--CDVETGRC-------KCRPNTYGRTCGQCEPGF-------WNFPHC 864
Query: 162 KRDTYPLGHGGSLNLQCNSE-GRC-QCKPGVTGDKCDRCDVNHYDFGEAG----CKSCEC 215
+R GH S C+S+ G C C+ TG CDRC +Y G C++C C
Sbjct: 865 QRCECN-GHAES----CDSKTGACINCRDYTTGHNCDRCIETYYGDPRIGVDIPCRACPC 919
Query: 216 ----NPAGSVKNTPNCDSVKGQ--CECKDNVEGAQCRS 247
+ S + + DSV CEC D G +C S
Sbjct: 920 PGTIDSGHSYAESCSLDSVTHDVICECFDGYTGPRCES 957
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 93/223 (41%), Gaps = 29/223 (13%)
Query: 35 GPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-QCKPGVTGDKCDR 88
GP CE C +NY+ + C +CNCN L L N GRC QC G C
Sbjct: 952 GPRCESCAENYFGHPEIPGGSCESCNCNNNTDLRLAGNCDPHTGRCLQCLYNTDGSNCQI 1011
Query: 89 CDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC----ESAQLSSRGRVHTELRVQ 143
C Y + E C+ C+C+ G+ +N CD GQC L R+
Sbjct: 1012 CKPGFYGNALEQDCQDCQCDVLGTDRNAGPCDHRTGQCPCLPHVIGLLCDSCEENHWRIA 1071
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 202
S + DP C+ D GS++ CN +G C+C+PG G +C+ C N
Sbjct: 1072 SGQGCDP----------CECDAV-----GSVSDSCNPYDGTCECRPGFGGRRCNECQTNF 1116
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C C+C+ GS + CD G C C + G +C
Sbjct: 1117 WGNPNVECYPCDCDLTGSA--SQQCDRETGTCICHKGIGGEKC 1157
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKG 232
L + GRC CK V G +C+ C +++F GC++C CN G++ N C+ V G
Sbjct: 422 LSGDESGRCHCKANVEGRRCNHCKYGYWNFDPENPEGCQACTCNTLGTIDNR-GCNMVTG 480
Query: 233 QCECKDNVEGAQC 245
+C CK V C
Sbjct: 481 ECTCKRFVTARDC 493
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 97/266 (36%), Gaps = 89/266 (33%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG + C G C++C+ G NC++C + YY + D C AC
Sbjct: 867 CECNGHAESC---------DSKTGACINCRDYTTGHNCDRCIETYYGDPRIGVDIPCRAC 917
Query: 58 NC-NPIGSLNLQCNS--------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCE 105
C I S + S + C+C G TG +C+ C N++ E C+SC
Sbjct: 918 PCPGTIDSGHSYAESCSLDSVTHDVICECFDGYTGPRCESCAENYFGHPEIPGGSCESCN 977
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
CN ++ NCD G+C
Sbjct: 978 CNNNTDLRLAGNCDPHTGRC---------------------------------------- 997
Query: 166 YPLGHGGSLNLQC--NSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
LQC N++G CQ CKPG G+ E C+ C+C+ G+
Sbjct: 998 ----------LQCLYNTDGSNCQICKPGFYGNAL-----------EQDCQDCQCDVLGTD 1036
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCRS 247
+N CD GQC C +V G C S
Sbjct: 1037 RNAGPCDHRTGQCPCLPHVIGLLCDS 1062
>gi|326911707|ref|XP_003202197.1| PREDICTED: LOW QUALITY PROTEIN: netrin-4-like, partial [Meleagris
gallopavo]
Length = 608
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 28/167 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD + + +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 311 CKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDA 370
Query: 54 CTACNCNPIGSLNLQCN-------SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L S G C CKPGV G +CDRC ++ FG GC+ C+C
Sbjct: 371 CKPCSCHPLGSAALPMGPRTFCDPSTGDCPCKPGVAGPRCDRCLPGYWGFGAGGCRPCDC 430
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
+C + G C S SS V + V F PA N
Sbjct: 431 --------ARSCHPLTGDCHS---SSSADVSWQQEVLP---FQPALN 463
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
S G C CKPGV G +CDRC ++ FG GC+ C+C
Sbjct: 395 STGDCPCKPGVAGPRCDRCLPGYWGFGAGGCRPCDC 430
>gi|194214468|ref|XP_001492354.2| PREDICTED: laminin subunit alpha-1 [Equus caballus]
Length = 3069
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 105/239 (43%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C YY C+ CNC+ GS + C EG+C+C PGV G++CD
Sbjct: 914 DCKPHVTGQQCDQCLRGYYGLDTGLGCSPCNCSASGSTSDDCTEEGQCRCVPGVAGERCD 973
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y + + C C+C +NT CD G+C +RG E
Sbjct: 974 RCARGFYAYQDGSCTRCDC---AHTQNT--CDPASGECVCPP-HTRGVTCEE-------- 1019
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCNS-EGRCQCKPGVTGD 193
G+ W GH GS + QC++ G CQCKP +G
Sbjct: 1020 ---CGDGYW------------GHDPELGCQPCNCSRVGSASRQCDALTGHCQCKPAFSGP 1064
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
C +C + + DF + C +C+CN G++ +T + C G C CK+NV G C
Sbjct: 1065 SCGQCSLGYRDFPD--CVACDCNLRGTLADTCDGEQGLCSCAEDTGTCSCKENVVGLHC 1121
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 99/237 (41%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C YY GD C AC C+ GSL+ C+ E G C CK
Sbjct: 860 GECLRCTGNTDGAHCERCAAGYY---GDAVTAKNCRACECHGQGSLSGVCHLETGLCDCK 916
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC C C+ +GS + +C +GQC
Sbjct: 917 PHVTGQQCDQCLRGYYGLDTGLGCSPCNCSASGSTSD--DCTE-EGQCRCVP-------- 965
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPG 189
AG R RC R Y G C + G C C P
Sbjct: 966 -----------GVAGERC---DRCARGFYAYQDGSCTRCDCAHTQNTCDPASGECVCPPH 1011
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C ++ E GC+ C C+ GS CD++ G C+CK G C
Sbjct: 1012 TRGVTCEECGDGYWGHDPELGCQPCNCSRVGSASR--QCDALTGHCQCKPAFSGPSC 1066
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + N+ GG C++C + G NCE C D YY+
Sbjct: 319 CNCHNKAKDCYYDESVANQKRSLNTAGQFKGGGVCINCLQNTMGINCETCIDGYYRPHKV 378
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D+ C C+C+P+GSL+ C + G+C CK G TG+KCDRC +
Sbjct: 379 SPYEDDPCHPCDCDPLGSLSSVCIKDDLHSDLHKGKWPGQCPCKEGYTGEKCDRCQFGYK 438
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
G C C+C+PAGSV P
Sbjct: 439 --GYPACVLCDCSPAGSVNEDP 458
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 105/262 (40%), Gaps = 56/262 (21%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCN 60
N FS C D G C C G CE+C D YY G++ C CNC+
Sbjct: 792 NNFSPTCHLDD------GDKVVCDQCAPGYSGAWCERCADGYYGNPTVPGES-CVPCNCS 844
Query: 61 P-IGSLNL-QCNS-EGRC-QCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKN 114
+ L + C+S G C +C G C+RC +Y C++CEC+ GS+
Sbjct: 845 GNVDPLEVGHCDSVTGECLRCTGNTDGAHCERCAAGYYGDAVTAKNCRACECHGQGSLSG 904
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG--- 171
C G C+ + H + + D +C R Y L G
Sbjct: 905 V--CHLETGLCDC-------KPHV-----TGQQCD----------QCLRGYYGLDTGLGC 940
Query: 172 --------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
GS + C EG+C+C PGV G++CDRC Y + + C C+C +N
Sbjct: 941 SPCNCSASGSTSDDCTEEGQCRCVPGVAGERCDRCARGFYAYQDGSCTRCDC---AHTQN 997
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
T CD G+C C + G C
Sbjct: 998 T--CDPASGECVCPPHTRGVTC 1017
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG+KCDRC + G C C+C+PAGSV P + C CK+NVE
Sbjct: 417 GQCPCKEGYTGEKCDRCQFGYK--GYPACVLCDCSPAGSVNEDPCSEP----CLCKENVE 470
Query: 242 GAQC 245
G C
Sbjct: 471 GKNC 474
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 36/242 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNFCTACNCNPIGSL--------NLQCN 70
G C C+ + G +CE+C +Y ++ GD C C C P+ + +L
Sbjct: 747 GVCSACKHNTTGDHCEQCMPGFYGRASRGTPGD--CQPCAC-PLSTASNNFSPTCHLDDG 803
Query: 71 SEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSC-ECNPAGSV--KNTPNCDSVKGQCE 126
+ C QC PG +G C+RC +Y +SC CN +G+V +CDSV G+C
Sbjct: 804 DKVVCDQCAPGYSGAWCERCADGYYGNPTVPGESCVPCNCSGNVDPLEVGHCDSVTGECL 863
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-GSLNLQCNSE-GRC 184
++ G H E R + D + + R C+ HG GSL+ C+ E G C
Sbjct: 864 RCTGNTDG-AHCE-RCAAGYYGDAVTAK--NCRACE------CHGQGSLSGVCHLETGLC 913
Query: 185 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
CKP VTG +CD+C +Y GC C C+ +GS + +C +GQC C V G
Sbjct: 914 DCKPHVTGQQCDQCLRGYYGLDTGLGCSPCNCSASGSTSD--DCTE-EGQCRCVPGVAGE 970
Query: 244 QC 245
+C
Sbjct: 971 RC 972
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 6 FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIG 63
FS C + + H C C +G CE+C Y+ ++ C +C+C+P G
Sbjct: 1454 FSPTCVLEGD------HDFRCDACLLGYEGQYCERCSSGYHGNPRAPGGTCQSCDCSPRG 1507
Query: 64 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
S++ C+ G+C C+PG TG +C+ C+ H E+ C SC+
Sbjct: 1508 SVHSDCDRRSGQCVCRPGATGLQCEECEPRHI-LVESDCISCD 1549
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
C CN S+ C D G CL+C + G +C+ C YY K + D A
Sbjct: 1395 CTCNNHSDACDPDT---------GTCLNCSDNTAGDHCDVCAPGYYGKVTGSASDCALCA 1445
Query: 57 CNCNPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C + S + C EG RC C G G C+RC ++ A C+SC+C+P
Sbjct: 1446 CPHSRPASFSPTCVLEGDHDFRCDACLLGYEGQYCERCSSGYHGNPRAPGGTCQSCDCSP 1505
Query: 109 AGSVKNTPNCDSVKGQC 125
GSV + +CD GQC
Sbjct: 1506 RGSVHS--DCDRRSGQC 1520
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 176 LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVK 231
L+ + + RC C G G C+RC ++ A C+SC+C+P GSV + +CD
Sbjct: 1460 LEGDHDFRCDACLLGYEGQYCERCSSGYHGNPRAPGGTCQSCDCSPRGSVHS--DCDRRS 1517
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G QC
Sbjct: 1518 GQCVCRPGATGLQC 1531
>gi|148669616|gb|EDL01563.1| mCG115886, isoform CRA_b [Mus musculus]
Length = 2272
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 109/237 (45%), Gaps = 42/237 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR Y C AC C+ IGS + C+ G+C C PG+T
Sbjct: 413 GRCL-CRPGVEGPQCDSCRSGSYSFP---ICQACQCSTIGSYPVPCDPGNGQCDCLPGIT 468
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF C+PAG++ DS G C+ Q H
Sbjct: 469 GRQCDRCLSGAYDFPYCQGSGSVCHPAGTL------DSSLGYCQCKQ-------HV---- 511
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLG-------HGGSLNL--QCNSE-GRCQCKPGVTG 192
+ W+L + P G G+L+ +C E G C CK VTG
Sbjct: 512 -ASPTCSVCKPLYWNLAK----ENPRGCSECQCHEAGTLSGIGECGQEDGDCSCKAHVTG 566
Query: 193 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
D CD C+ + ++ GC+ C+C+ G++ T C G C+C+++VEG QC+
Sbjct: 567 DACDTCEDGFFSLEKSNYFGCQGCQCDIGGAL--TTMCSGPSGVCQCREHVEGKQCQ 621
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 110/265 (41%), Gaps = 74/265 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D ++ ++ GG C++CQ + G NCEKC Y++ G
Sbjct: 262 CNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYFRPHGV 321
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S G C CKP +GD C+ C +Y+F
Sbjct: 322 PVDALHGCIPCSCDPERADDCDQGS-GHCHCKPNFSGDYCETCADGYYNF---------- 370
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP------AGNRIWDLRR 160
P C LR+ N+ P AGN ++
Sbjct: 371 ---------PFC---------------------LRIPVFPNYTPSPEDPVAGN----IKG 396
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
C + G L C+ GRC C+PGV G +CD C Y F C++C+C+ GS
Sbjct: 397 CDCNL-----EGVLPEICDDRGRCLCRPGVEGPQCDSCRSGSYSF--PICQACQCSTIGS 449
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD GQC+C + G QC
Sbjct: 450 YPVP--CDPGNGQCDCLPGITGRQC 472
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 94/201 (46%), Gaps = 31/201 (15%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P G+ C+ EG +C C+P V G +C RC +Y F CK C C
Sbjct: 1167 NGAIPCECDPAGTAGHHCSPEGGQCPCRPNVIGRQCSRCATGYYGF--PYCKPCNCGRRL 1224
Query: 111 SVKNTPNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ T C +V+ QCE +++S NF P D+ C R
Sbjct: 1225 CEEVTGKCLCPPHTVRPQCEVCEMNSF-------------NFHPVAG--CDVCNCSRK-- 1267
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G + +C+ + G+C+CKP VTG +CD+C Y F E C C CN G+ +
Sbjct: 1268 --GTIEAAVSECDRDSGQCRCKPRVTGQQCDKCAPGFYQFPE--CVPCSCNRDGTEPSV- 1322
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
CD G C CK+NVEG QC+
Sbjct: 1323 -CDPETGACMCKENVEGPQCQ 1342
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C+ +Y + C C C
Sbjct: 1593 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCERCQAGHYGNAIHGSCRVCPCP 1643
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C +G RC CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1644 HTNSFATGCAVDGGAVRCACKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLG 1702
Query: 114 NTPNCDSVKGQC 125
CD + G C
Sbjct: 1703 ---PCDPLTGDC 1711
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----EGRCQCKP 79
G CL C P CE C N + C CNC+ G++ + G+C+CKP
Sbjct: 1230 GKCL-CPPHTVRPQCEVCEMNSFNFHPVAGCDVCNCSRKGTIEAAVSECDRDSGQCRCKP 1288
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C Y F E C C CN G+ + CD G C
Sbjct: 1289 RVTGQQCDKCAPGFYQFPE--CVPCSCNRDGTEPSV--CDPETGAC 1330
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G C+ C D ++ N+ C C C+ G+L C+ G CQC+ V G +
Sbjct: 560 CKAHVTGDACDTCEDGFFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGVCQCREHVEGKQ 619
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 620 CQRPENNYY 628
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 28 DCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
DC G C++C Y Q SG C+P G+L+ +S G CQCK V
Sbjct: 462 DCLPGITGRQCDRCLSGAYDFPYCQGSGSV------CHPAGTLD---SSLGYCQCKQHVA 512
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
C C +++ + GC C+C+ AG++ C G C S + V +
Sbjct: 513 SPTCSVCKPLYWNLAKENPRGCSECQCHEAGTLSGIGECGQEDGDC-----SCKAHVTGD 567
Query: 140 L-RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDR 197
F + + + C+ D GG+L C+ G CQC+ V G +C R
Sbjct: 568 ACDTCEDGFFSLEKSNYFGCQGCQCDI-----GGALTTMCSGPSGVCQCREHVEGKQCQR 622
Query: 198 CDVNHY 203
+ N+Y
Sbjct: 623 PENNYY 628
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 78/204 (38%), Gaps = 38/204 (18%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ + G C +C YY G +C CNC L G+C C P
Sbjct: 1188 GGQC-PCRPNVIGRQCSRCATGYY---GFPYCKPCNCG----RRLCEEVTGKCLCPPHTV 1239
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN-TPNCDSVKGQCESAQLSSRGRVHTEL 140
+C+ C++N ++F AGC C C+ G+++ CD GQC + RV
Sbjct: 1240 RPQCEVCEMNSFNFHPVAGCDVCNCSRKGTIEAAVSECDRDSGQCRC-----KPRV---- 1290
Query: 141 RVQSRKNFDPAGNRIWDLRRC-----KRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDK 194
+ + D + C RD G+ C+ E G C CK V G +
Sbjct: 1291 ---TGQQCDKCAPGFYQFPECVPCSCNRD-------GTEPSVCDPETGACMCKENVEGPQ 1340
Query: 195 CDRCDVNHYDFGEA---GCKSCEC 215
C C + GC C C
Sbjct: 1341 CQLCREGSFYLDPTNPKGCTKCFC 1364
>gi|301607003|ref|XP_002933101.1| PREDICTED: laminin subunit beta-2-like [Xenopus (Silurana)
tropicalis]
Length = 1783
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 38/233 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN S +C FD +Y TG+ GG C DC + G NCE C+ +Y+ +
Sbjct: 335 CNCNNHSRKCHFDMAVYLSTGNVSGGVCDDCVHNTMGRNCELCKPFFYKDPSKDLRDSAV 394
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C AC+C+P GSL+ C+S G+C+CK V G +CDRC + G
Sbjct: 395 CKACDCDPDGSLDGGLCDSLDNPALGLIAGQCRCKDYVEGPRCDRCKTGFFGLSTNNFQG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+C+P G++ + CD + G C + + GR Q F + + R
Sbjct: 455 CQRCQCDPRGTISDGAQCDPISGDCFCKRFVT-GRTCN----QCLPEFWALSHDLHGCRS 509
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD-------RCDVNHYDF 205
C D GG+ + C +E G+C+C+ + G +C+ R ++HY +
Sbjct: 510 CDCDI-----GGAWDNHCATETGQCRCRSHMVGRQCNQVKSGYYRIHLDHYTY 557
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C+C+P GSL+ +C+ G +CQCK V G +CDRC + FG GCK+CECN GS N
Sbjct: 768 CSCDPQGSLSSECDPNGGQCQCKANVIGQRCDRCAPGTHGFGPTGCKACECNMEGSTHNF 827
Query: 116 PNCDSVKGQC 125
CD GQC
Sbjct: 828 --CDQRTGQC 835
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 113/271 (41%), Gaps = 48/271 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTA 56
C CNG S C RTG CL+C+ G CE+C +Y SGD+ C
Sbjct: 862 CQCNGHSEEC------DQRTGA---CLNCRDHSTGDRCERCTAGFYGNPILGSGDH-CRP 911
Query: 57 CNC----NPIGSLNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY--DFGEAG-CKSC 104
C C N C+ + R C CK G TG +C+ C + F G C C
Sbjct: 912 CPCPEGPNSGRHYAASCHQDPRSRQVICNCKQGYTGPRCEECSPGFFGNPFQTGGRCLLC 971
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
+CN + + CD GQC + ++ GR R+ F +R R C++
Sbjct: 972 QCNNNIDMTDIGGCDRRSGQCLKCKYNTEGRFCEHCRI----GFYGDASR----RNCRKC 1023
Query: 165 TYPLGHGGSLNLQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCE 214
T + G+ QC S G+C C P V G CDRC + ++ GC+ C
Sbjct: 1024 T--CNYLGTEPSQCPSREDCMCDRTSGQCLCLPNVRGQNCDRCSPHFWNLASGKGCQPCN 1081
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+P S + +C+ G+C+C+ G C
Sbjct: 1082 CDPNHSF--SLSCNEFTGKCQCRPGFGGLTC 1110
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 100/236 (42%), Gaps = 28/236 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
GG C C+ + G C++C + G C AC CN GS + C+ G+C C+PG
Sbjct: 784 GGQC-QCKANVIGQRCDRCAPGTH-GFGPTGCKACECNMEGSTHNFCDQRTGQCPCRPGA 841
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CDRC H+ F C+ C+CN ++ CD G C + R H+
Sbjct: 842 FGSRCDRCQPGHWGF--PNCRQCQCN-----GHSEECDQRTGACLNC------RDHSTGD 888
Query: 142 VQSRKNFDPAGNRIWDL-RRCKRDTYPLG--HGGSLNLQCNSEGR-----CQCKPGVTGD 193
R GN I C+ P G G C+ + R C CK G TG
Sbjct: 889 RCERCTAGFYGNPILGSGDHCRPCPCPEGPNSGRHYAASCHQDPRSRQVICNCKQGYTGP 948
Query: 194 KCDRCDVNHY--DFGEAG-CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+C+ C + F G C C+CN + + CD GQC +CK N EG C
Sbjct: 949 RCEECSPGFFGNPFQTGGRCLLCQCNNNIDMTDIGGCDRRSGQCLKCKYNTEGRFC 1004
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G +CDRC + GC+ C+C+P G++ + CD + G C CK
Sbjct: 424 GQCRCKDYVEGPRCDRCKTGFFGLSTNNFQGCQRCQCDPRGTISDGAQCDPISGDCFCKR 483
Query: 239 NVEGAQC 245
V G C
Sbjct: 484 FVTGRTC 490
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 64/158 (40%), Gaps = 43/158 (27%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G C C+P GS+ + CD GQC Q + N G R
Sbjct: 764 GALPCSCDPQGSLSS--ECDPNGGQC-----------------QCKANV--IGQRC---D 799
Query: 160 RCKRDTYPLGHGGSLNLQCNSE-----------GRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC T+ G G +CN E G+C C+PG G +CDRC H+ F
Sbjct: 800 RCAPGTHGFGPTGCKACECNMEGSTHNFCDQRTGQCPCRPGAFGSRCDRCQPGHWGF--P 857
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
C+ C+CN ++ CD G C C+D+ G +C
Sbjct: 858 NCRQCQCN-----GHSEECDQRTGACLNCRDHSTGDRC 890
>gi|301617327|ref|XP_002938099.1| PREDICTED: laminin subunit alpha-1-like [Xenopus (Silurana)
tropicalis]
Length = 2972
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 105/251 (41%), Gaps = 53/251 (21%)
Query: 18 NRTGH----GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQC 69
+ TGH G CL C + G +CE C D +Y GD CTAC C+P S++ C
Sbjct: 806 SETGHCDSVTGECLKCIDNTAGSHCEICADGFY---GDAVFAKNCTACRCHPNSSISATC 862
Query: 70 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCES 127
+ E G C+CK V G +CD C HY GC C C+ GS+ + C+ + GQC
Sbjct: 863 HHETGLCECKINVLGQRCDTCVHGHYGLTTGLGCHPCNCSQMGSISDA--CNDL-GQC-- 917
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR--RCKRDTYPLGHGG-------SLNLQC 178
P + L+ C Y GG C
Sbjct: 918 ----------------------PCVPGVAGLKCDICAHGFYAFQEGGCSPCDCAHTQNNC 955
Query: 179 N-SEGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
N G C C P G KCD C+ N++ E GC +C C+ AGS T CD GQC C
Sbjct: 956 NPMTGECICPPHTLGPKCDSCEANYWGHDPELGCLNCNCSIAGS--QTLQCDLSSGQCPC 1013
Query: 237 KDNVEGAQCRS 247
KD G C +
Sbjct: 1014 KDGFGGHNCNT 1024
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 102/239 (42%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+ C +Y + C CNC+ +GS++ CN G+C C PGV G KCD
Sbjct: 870 ECKINVLGQRCDTCVHGHYGLTTGLGCHPCNCSQMGSISDACNDLGQCPCVPGVAGLKCD 929
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
C Y F E GC C+C +N NC+ + G+C +
Sbjct: 930 ICAHGFYAFQEGGCSPCDC---AHTQN--NCNPMTGEC----------------ICPPHT 968
Query: 148 FDPAGNRIWDLRRCKRDTYPLGH-------------GGSLNLQCN-SEGRCQCKPGVTGD 193
P + C+ + + GH GS LQC+ S G+C CK G G
Sbjct: 969 LGPKCD------SCEANYW--GHDPELGCLNCNCSIAGSQTLQCDLSSGQCPCKDGFGGH 1020
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGS-------VKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C + C +C+C+P+G+ + +C+ G C CK NV G+ C
Sbjct: 1021 NCNTCAFGFRQY--PSCIACDCDPSGTQSAWCDDTQTVCSCEEDAGICACKGNVVGSYC 1077
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 28/141 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + +R GG CL+C G NCE C + YY++
Sbjct: 346 CNCHNKAEDCYYDQGVADRNMSLNINNQYIGGGVCLNCTQFTAGINCETCIEGYYRQHKV 405
Query: 51 ----DNFCTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDF 96
DN C C C+ GS+N C +S G+CQCK G TG KCD+C + F
Sbjct: 406 SPYEDNPCIPCECDVFGSVNSVCVVDDNHAKPGSSPGQCQCKEGYTGTKCDQCK---FGF 462
Query: 97 -GEAGCKSCECNPAGSVKNTP 116
G C C C+ GSV P
Sbjct: 463 KGYPNCVRCNCSLVGSVNEDP 483
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C GP C+ C NY+ + C CNC+ GS LQC+ S G+C CK G
Sbjct: 960 GECI-CPPHTLGPKCDSCEANYWGHDPELGCLNCNCSIAGSQTLQCDLSSGQCPCKDGFG 1018
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G C+ C + C +C+C+P+G+
Sbjct: 1019 GHNCNTCAFGFRQY--PSCIACDCDPSGT 1045
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C +G CE+C YY + C C+CN GSLN C+ G+C CKPGVTG
Sbjct: 1427 CLPGYEGQYCERCSLGYYGNPNEPGGTCQKCDCNFSGSLNNDCDGMTGQCSCKPGVTGRL 1486
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
CD C++ H + C SC+ + G + + + DS+ S L+
Sbjct: 1487 CDTCEIRHILLDQE-CISCDDDCTGPLLD--DLDSLHMAMHSVNLT 1529
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 179 NSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+S G+CQCK G TG KCD+C + F G C C C+ GSV P + QC CK
Sbjct: 439 SSPGQCQCKEGYTGTKCDQCK---FGFKGYPNCVRCNCSLVGSVNEDPCAE----QCVCK 491
Query: 238 DNVEGAQC 245
DNVEG C
Sbjct: 492 DNVEGENC 499
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG---SLNLQCNSEG----R 74
G C DC+ + DG +C C +Y + C+ C C P G S + C EG R
Sbjct: 1365 GKCQDCRDNTDGHHCHVCASGFYGRVTGTIADCSLCAC-PKGNTQSFSPTCVLEGISDFR 1423
Query: 75 C-QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC 125
C C PG G C+RC + +Y + E G C+ C+CN +GS+ N +CD + GQC
Sbjct: 1424 CDACLPGYEGQYCERCSLGYYGNPNEPGGTCQKCDCNFSGSLNN--DCDGMTGQC 1476
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 167 PLGHGGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPA 218
P G+ S + C EG RC C PG G C+RC + +Y + E G C+ C+CN +
Sbjct: 1403 PKGNTQSFSPTCVLEGISDFRCDACLPGYEGQYCERCSLGYYGNPNEPGGTCQKCDCNFS 1462
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS+ N +CD + GQC CK V G C
Sbjct: 1463 GSLNN--DCDGMTGQCSCKPGVTGRLC 1487
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
GSLN C+ G+C CKPGVTG CD C++ H + C SC+
Sbjct: 1463 GSLNNDCDGMTGQCSCKPGVTGRLCDTCEIRHILLDQE-CISCD 1505
>gi|297481810|ref|XP_002707771.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Bos
taurus]
gi|296480898|tpg|DAA23013.1| TPA: laminin alpha 5-like [Bos taurus]
Length = 3689
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 105/233 (45%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL C+ + +GP+C++CR Y+ G C AC C+P GS++ C + G C+C G
Sbjct: 597 AGRCL-CRPEFNGPHCDRCRLGYH---GYPECHACACDPRGSVDQLCGAGGLCRCCSGYA 652
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F + C C C+P GS+ CD GQC S R RV T LR
Sbjct: 653 GSTCQECSPGFHGFPD--CAPCHCSPEGSLHAA--CDPHSGQC-----SCRPRV-TGLRC 702
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G + + ++ C C+ V G CDR
Sbjct: 703 DMCVPGAYNFP----------YCEAGSCHPAGLAPADRVPPEAQAPCTCRAHVEGPSCDR 752
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+P G++ C GQC CK +V G C +
Sbjct: 753 CKPGFWGLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNGQCFCKPHVCGQTCAA 805
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 98/259 (37%), Gaps = 59/259 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC G ++ C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 353 CNCYGHAHDCYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSPDH 412
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC + + GRC C+P TG +CD C DF C
Sbjct: 413 PLDSPHACRRCNCESDFTDGTCEDLTGRCYCRPNFTGARCDACAEGFTDF-----PHCYP 467
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P+ S +T G + S+ G GN C++D
Sbjct: 468 VPSSSHNDTGEQVLPAGHIVNCDCSAAGT---------------QGNA------CRKDP- 505
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G C CKP G C+ C Y GC+ C+C+ G V T
Sbjct: 506 -------------QVGHCVCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVVDGT-- 547
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC C+ EGA C
Sbjct: 548 CDRDSGQCTCRTGFEGAAC 566
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 113/265 (42%), Gaps = 46/265 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G C+ CQ + +G +CE+C+ + + ++ C +C
Sbjct: 1852 CQCHGHSDRCLPGS---------GVCIGCQHNTEGDHCERCQAGFVRTGSEDPAAPCISC 1902
Query: 58 NCN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNP 108
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1903 PCPLAVPSNNFATGCILRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSG 1962
Query: 109 AGSVKNT-PNCDSVKGQCESAQLSSRG--RVHTELRVQS-RKNFDPAGNRIWDLRRCKR- 163
G +CD + G C RG R T R +S F GN + C R
Sbjct: 1963 NGDPNMLFSDCDPLTGTC-------RGCLRHTTGPRCESCAPGF--YGNALLP-GNCTRC 2012
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSV 221
D P G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2013 DCSPCGTEA-----CDPHSGHCLCKAGVTGLRCDRCQEGHFGFEGCEGCRPCACGPAA-- 2065
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCR 246
+ C GQC C+ G QCR
Sbjct: 2066 -ESSECHPQSGQCHCRPGTGGPQCR 2089
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+++ C G +C C+ V G C RC ++ F C+ C+C+ G +
Sbjct: 1431 CGCHEVGAMSPTCEPFGGQCPCRAHVIGRDCSRCATGYWGF--PSCRPCDCS--GRL--- 1483
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1484 --CDELTGQC----------------ICPPRTIPP------DCLVCQPQTFGCHPLVGCE 1519
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G ++ C+++ G+C+C+P V G +CD C + F C+ C+C+ AGS
Sbjct: 1520 ECNCSGPGVQELMDPTCDADSGQCKCRPNVAGRRCDTCAPGFHGF--PSCRPCDCHEAGS 1577
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
T CD + GQC CK+NV+G +C
Sbjct: 1578 APGT--CDPLTGQCYCKENVQGPRC 1600
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 81/210 (38%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1960 CSGNGDPNMLFSDCDPLT-----GTCRGCLRHTTGPRCESCAPGFYGNALLPGNCTRCDC 2014
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
+P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA + C
Sbjct: 2015 SPCGTEACDPHS-GHCLCKAGVTGLRCDRCQEGHFGFEGCEGCRPCACGPAA---ESSEC 2070
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G QC
Sbjct: 2071 HPQSGQCHCR----------------------PGTGGPQCRECAPGHWGLPEQGCRRCQC 2108
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG+ G++C+ C H
Sbjct: 2109 QGGHCDLHTGRCTCPPGLGGERCETCSHQH 2138
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTA-----CNCNPIGSLNLQCNSE---GRCQCKPG 80
+G D P+C + + +G+ A C+C+ G+ C + G C CKP
Sbjct: 456 AEGFTDFPHCYPVPSSSHNDTGEQVLPAGHIVNCDCSAAGTQGNACRKDPQVGHCVCKPN 515
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G C+ C Y GC+ C+C+ G V T CD GQC
Sbjct: 516 FQGTHCELCAPGFYG---PGCQPCQCSSPGVVDGT--CDRDSGQCTC------------- 557
Query: 141 RVQSRKNFDPAGNRIWDLRRCKR-----DTYPL------GHGGSLNLQCNSEGRCQCKPG 189
R F+ A C R +PL G+L C+ GRC C+P
Sbjct: 558 ----RTGFEGAA--------CDRCAPGYFHFPLCQLCGCSPVGTLPEGCDDAGRCLCRPE 605
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
G CDRC + ++ + E C +C C+P GSV
Sbjct: 606 FNGPHCDRCRLGYHGYPE--CHACACDPRGSV 635
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 23/147 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCN-SEGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT CNC+P G+L QC G+C CKP V G
Sbjct: 741 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNGQCFCKPHVCG 800
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC------------ESA 128
C C + +A GC+SC C+ G++ + C+ G C E A
Sbjct: 801 QTCAACKDGFFGLDQADYFGCRSCRCDVGGALGQS--CELRTGACMCRPNTQGSTCSEPA 858
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRI 155
Q +H LR++ + P G+ +
Sbjct: 859 QDHYLPDLH-HLRLELEEAATPEGHAV 884
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C H+ E GC+ C+C +CD G+C C +
Sbjct: 2075 GQCHCRPGTGGPQCRECAPGHWGLPEQGCRRCQCQGG-------HCDLHTGRCTCPPGLG 2127
Query: 242 GAQCRS 247
G +C +
Sbjct: 2128 GERCET 2133
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 70/190 (36%), Gaps = 22/190 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL---NLQCNSEGRCQCK 78
H G C C+ G C+ C Y +C A +C+P G + ++ C C+
Sbjct: 687 HSGQC-SCRPRVTGLRCDMCVPGAYNFP---YCEAGSCHPAGLAPADRVPPEAQAPCTCR 742
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
V G CDRC + + GC C C+P G++ C GQC +
Sbjct: 743 AHVEGPSCDRCKPGFWGLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNGQC-----FCKPH 797
Query: 136 VHTELRVQSRKNFDPAGNR-IWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGD 193
V + + F + R C+ D GG+L C G C C+P G
Sbjct: 798 VCGQTCAACKDGFFGLDQADYFGCRSCRCDV-----GGALGQSCELRTGACMCRPNTQGS 852
Query: 194 KCDRCDVNHY 203
C +HY
Sbjct: 853 TCSEPAQDHY 862
>gi|195385926|ref|XP_002051655.1| GJ11135 [Drosophila virilis]
gi|194148112|gb|EDW63810.1| GJ11135 [Drosophila virilis]
Length = 1796
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 111/236 (47%), Gaps = 56/236 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNF 53
C CNG + C FD+ ++ +GH GG C +C + G +CE+C +Y Q S N
Sbjct: 354 CECNGHAVSCHFDEAVFVASGHVSGGFCDNCLHNTQGQHCEECMAFFYRDPAEQLSSPNV 413
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C C+C+P GSL+ C+S G C CKP V G +CDRC +++ AG
Sbjct: 414 CKPCDCDPDGSLDEGICDSVNDPENGIEAGACHCKPNVKGRRCDRCKDGYWNLDPNNPAG 473
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C CN G+V N+ C+ G+C+ +L + G+ D +
Sbjct: 474 CEACTCNTLGTVNNS-GCNMRTGECQCKRLVT-GK---------------------DCNQ 510
Query: 161 CKRDTYPLGH------------GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
C+ +T+ L GGS + C+ GRC+C+ +TG C + N+Y
Sbjct: 511 CQPETFGLSESEDGCTLCNCDVGGSYDNYCDVLTGRCRCRSHMTGRTCSQPKQNYY 566
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 55 TACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
+ CNCNP GSL+ C++ G CQCKP V G +CD+C Y FG GCK+C+CN GS
Sbjct: 795 SMCNCNPTGSLSKVCDANGGFCQCKPNVVGRQCDQCAPGTYGFGPEGCKACDCNSIGSKD 854
Query: 114 NTPNCDSVKGQC 125
N NCD + GQC
Sbjct: 855 N--NCDLLTGQC 864
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 69/227 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---SEGRCQCKPG 80
G CL C D G +CE CRD Y+ + C C C+ +G+ + G+C C P
Sbjct: 1018 GACLKCLYDTTGDHCELCRDGYHGDALQQNCRQCECDFLGTNKTLAHCDRFTGQCPCLPN 1077
Query: 81 VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G C++C +NH+ G GC++C NCD++
Sbjct: 1078 VQGLLCNQCALNHWKIGSGEGCEAC------------NCDAI------------------ 1107
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
G++ QC++ G+C+CKPG G C++C
Sbjct: 1108 --------------------------------GAVQEQCHTFTGQCECKPGFGGRACNQC 1135
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+++ C+ CEC+ G+ CD GQC C + + G +C
Sbjct: 1136 QEHYWGNPNEKCQPCECDQFGAADF--QCDRETGQCVCHEGIGGYKC 1180
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 106/233 (45%), Gaps = 42/233 (18%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
+GG C C+ + G C++C Y G C AC+CN IGS + C+ G+C C P
Sbjct: 811 ANGGFC-QCKPNVVGRQCDQCAPGTY-GFGPEGCKACDCNSIGSKDNNCDLLTGQCACHP 868
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G +C++C +++F C+SCECN ++ CD + GQC + Q S+ G
Sbjct: 869 NTYGRECNQCQPGYWNF--PMCRSCECNGHAAL-----CDPLTGQCLNCQDSTTG----- 916
Query: 140 LRVQSRKNF-----------DPAGNRIWDLRRCK-RDTYPLG----HGGSLNLQCNSEGR 183
F DP R C+ DT G G SL+ + N+
Sbjct: 917 --------FGCDSCLDGYYGDPLLGSEIGCRACRCPDTIASGMSHAEGCSLDTR-NNNML 967
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC 234
C C+ G +G +C+ C N++ E+G C CEC+ + +T NCD G C
Sbjct: 968 CHCQEGYSGARCEICADNYFGSPESGGSCSKCECSNNIDIYDTGNCDRQTGAC 1020
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 89/242 (36%), Gaps = 83/242 (34%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEG---- 73
G CL+CQ G C+ C D YY GD C AC C P + ++EG
Sbjct: 905 GQCLNCQDSTTGFGCDSCLDGYY---GDPLLGSEIGCRACRC-PDTIASGMSHAEGCSLD 960
Query: 74 ------RCQCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC 125
C C+ G +G +C+ C N++ E+G C CEC+
Sbjct: 961 TRNNNMLCHCQEGYSGARCEICADNYFGSPESGGSCSKCECS------------------ 1002
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC- 184
N D I+D C R T G C
Sbjct: 1003 --------------------NNID-----IYDTGNCDRQT----------------GACL 1021
Query: 185 QCKPGVTGDKCDRC-DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
+C TGD C+ C D H D + C+ CEC+ G+ K +CD GQC C NV+G
Sbjct: 1022 KCLYDTTGDHCELCRDGYHGDALQQNCRQCECDFLGTNKTLAHCDRFTGQCPCLPNVQGL 1081
Query: 244 QC 245
C
Sbjct: 1082 LC 1083
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G C CKP V G +CDRC +++ AGC++C CN G+V N+ C+ G+C+CK
Sbjct: 443 GACHCKPNVKGRRCDRCKDGYWNLDPNNPAGCEACTCNTLGTVNNS-GCNMRTGECQCKR 501
Query: 239 NVEGAQC 245
V G C
Sbjct: 502 LVTGKDC 508
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 69/170 (40%), Gaps = 45/170 (26%)
Query: 90 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD 149
DV+ Y + G C CNP GS+ CD+ G C+ + + GR
Sbjct: 785 DVSKYIYD--GASMCNCNPTGSLSKV--CDANGGFCQ-CKPNVVGR-------------- 825
Query: 150 PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-----------EGRCQCKPGVTGDKCDRC 198
+C TY G G CNS G+C C P G +C++C
Sbjct: 826 -------QCDQCAPGTYGFGPEGCKACDCNSIGSKDNNCDLLTGQCACHPNTYGRECNQC 878
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCRS 247
+++F C+SCECN ++ CD + GQC C+D+ G C S
Sbjct: 879 QPGYWNF--PMCRSCECNGHAAL-----CDPLTGQCLNCQDSTTGFGCDS 921
>gi|395855486|ref|XP_003800190.1| PREDICTED: usherin [Otolemur garnettii]
Length = 5202
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 115/228 (50%), Gaps = 24/228 (10%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C+ C + Q D+ C C CN GS+N CN G+C+C+ G +
Sbjct: 717 CKANVIGLRCDHCNFGFKFLQSFNDDGCEPCQCNLHGSVNKFCNPLSGQCECRKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y GCK+C+C+ AGS+ T CD+ GQC + + GR E R
Sbjct: 777 CDTCRENFYGLDVTGCKACDCDTAGSLSGT-VCDAKTGQC-VCKPNVGGRRCNECL---R 831
Query: 146 KNFD-PAGNRIWDLR-RCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKCDRCDV 200
NF P N L C + G++N L C+ S G+C CK GVTG +C++C+
Sbjct: 832 GNFYLPQNNSFLCLPCNCNKT-------GTINGSLLCDKSTGQCPCKLGVTGLRCNQCEP 884
Query: 201 NHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ Y+ GC CEC+P G++ + CD V GQC C N +G +C
Sbjct: 885 HRYNLNIDHFHGCYMCECDPLGTLPGS-ICDPVNGQCLCLPNRQGRRC 931
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 118/249 (47%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKC-RDNYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C R N+Y ++F C CNCN G++N L C+ S G+C CK
Sbjct: 813 GQCV-CKPNVGGRRCNECLRGNFYLPQNNSFLCLPCNCNKTGTINGSLLCDKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ GC CEC+P G++ + CD V GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLNIDHFHGCYMCECDPLGTLPGS-ICDPVNGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPLGHGGSLNLQCNSEG-------- 182
L + +R+ RRC + YP G L C+ G
Sbjct: 921 ----LCLPNRQG-----------RRCNQCQPGFYIYPGNAPGCLPCSCHVTGAVSNVCDS 965
Query: 183 ---RCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
+C C+ VTG CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDVSVTGQNCDQCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVSGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 83/192 (43%), Gaps = 32/192 (16%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQC--NSEGRCQCKPGVTGD 84
C+ G C +C + Y + D+F C C C+P+G+L G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLNIDHFHGCYMCECDPLGTLPGSICDPVNGQCLCLPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG------RV 136
+C++C Y + GC C C+ G+V N CDS+ GQC +S G +
Sbjct: 930 RCNQCQPGFYIYPGNAPGCLPCSCHVTGAVSNV--CDSLTGQCVCQDVSVTGQNCDQCKD 987
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKC 195
H FDP R C+ L G+LN C+ G+C CK VTG KC
Sbjct: 988 H-------YFGFDPQTGR------CQPCNCHLS--GALNETCHLVSGQCFCKQFVTGSKC 1032
Query: 196 DRC--DVNHYDF 205
D C +H D
Sbjct: 1033 DACVPSASHLDI 1044
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK V+G +C++C Y+ E GC+ C CN +G+V C GQC+CK
Sbjct: 660 GQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCRPCNCNTSGTVDGDITCHQNSGQCKCKA 719
Query: 239 NVEGAQC 245
NV G +C
Sbjct: 720 NVIGLRC 726
>gi|187607312|ref|NP_001120605.1| laminin, alpha 5 precursor [Xenopus (Silurana) tropicalis]
gi|171846410|gb|AAI61643.1| LOC100145762 protein [Xenopus (Silurana) tropicalis]
Length = 1649
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 112/240 (46%), Gaps = 49/240 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ + DGP CE+C Y+ C AC+C+P G+ + C G CQC P G
Sbjct: 588 GRCL-CKPEYDGPRCEQCIVGYHSYP---HCQACSCDPRGAADNNCTPTGHCQCHPNYAG 643
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C +C HY G C CNP+GS + + +S++G CE R H E
Sbjct: 644 PSCSQCAAGHY--GYPSCTLGPCNPSGS--KSLSVNSLEGSCEC-------RDHVE---- 688
Query: 144 SRKNFDPAGNR----IWDL--------RRCKRDTYPLGHGGSLN--LQC-NSEGRCQCKP 188
PA ++ W+L RC+ G G++N +C + G+C CKP
Sbjct: 689 -----GPACDKCKPLYWNLAPENPHGCTRCQ-----CGSDGTINGVGECRQATGQCFCKP 738
Query: 189 GVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C C +Y+ + GC+ C+C+ GS+ C G C+C++NV+G+QC
Sbjct: 739 NICSRTCSTCKDGYYNLQPSSYFGCQGCQCDIGGSIGLA--CHEKTGGCQCRENVQGSQC 796
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 99/224 (44%), Gaps = 42/224 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C ++ C C C+P+G+L C+S GRC CKP G +C++
Sbjct: 547 CRSGFEGFLCDQCAPGFFNYP---LCQLCGCSPVGTLPQGCDSTGRCLCKPEYDGPRCEQ 603
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C V ++ + C++C C+P G+ N NC + G C Q N+
Sbjct: 604 CIVGYHSYPH--CQACSCDPRGAADN--NC-TPTGHC-----------------QCHPNY 641
Query: 149 DPAGNRIWDLRRCKRDTY--------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCD 199
AG +C Y P GS +L NS EG C+C+ V G CD+C
Sbjct: 642 --AGP---SCSQCAAGHYGYPSCTLGPCNPSGSKSLSVNSLEGSCECRDHVEGPACDKCK 696
Query: 200 VNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
+++ GC C+C G++ C GQC CK N+
Sbjct: 697 PLYWNLAPENPHGCTRCQCGSDGTINGVGECRQATGQCFCKPNI 740
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 109/261 (41%), Gaps = 62/261 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNCNG + C++D E+ R GG C+DCQ + DG NCE+C YY+
Sbjct: 342 CNCNGHAYDCYYDPEVERRRASMDQHGDFVGGGVCVDCQHNTDGVNCERCIVGYYKSPDH 401
Query: 50 ---GDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C C+C+ ++ C + GRC CKP TG+ C+ C + DF
Sbjct: 402 PSDSPHTCLRCSCD-TEFMDGSCEDLTGRCYCKPNYTGETCESCAEGYMDFP-------H 453
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT-ELRVQSRKNFDPAGNRIWDLRRCKRD 164
C P V +TPN G Q+ + G + + V + GN C++D
Sbjct: 454 CYP---VPDTPN-----GGGTGEQVLTVGEIINCDCHVAGTE-----GN------ACRKD 494
Query: 165 TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
+ G C CKP GD C+ C F C C+C+ G + T
Sbjct: 495 PF--------------VGACVCKPNYWGDSCETCAPG---FFGPSCLDCQCSGPGVLDGT 537
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQC+C+ EG C
Sbjct: 538 --CDRESGQCQCRSGFEGFLC 556
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 92/214 (42%), Gaps = 27/214 (12%)
Query: 37 NCEKCRDNYYQKS--GDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNH 93
N + CRD S +N C+C+ G+L C G +C C+P V G C RC +
Sbjct: 1354 NSKFCRDAAISLSLFYNNGAQPCDCHEAGALGTACEPHGGQCNCRPNVIGRDCSRCATGY 1413
Query: 94 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
+ F C+ C+C + CD V GQC + + + V + F
Sbjct: 1414 WGF--PNCRPCDCG-------SRLCDEVTGQC----ICPPRTIKPDCVVCQPQAFG---- 1456
Query: 154 RIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
L C+ + P G C+ + G+C C P V G +C+RC Y G C+
Sbjct: 1457 -CHPLVGCEECNCSPTGLQNKTEPGCDIQTGQCTCMPNVVGRRCERCAPGFY--GYPACR 1513
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C CN G + CD V GQC CK+NVEG C
Sbjct: 1514 PCNCNRDGVELSI--CDPVTGQCHCKENVEGLTC 1545
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C + GP+C +C +Y G CT CNP GS +L NS EG C+C+ V
Sbjct: 633 GHC-QCHPNYAGPSCSQCAAGHY---GYPSCTLGPCNPSGSKSLSVNSLEGSCECRDHVE 688
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHT 138
G CD+C +++ GC C+C G++ C GQC + SR
Sbjct: 689 GPACDKCKPLYWNLAPENPHGCTRCQCGSDGTINGVGECRQATGQCFCKPNICSRTCSTC 748
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
+ N P+ + + C+ D GGS+ L C+ + G CQC+ V G +C++
Sbjct: 749 K---DGYYNLQPSS--YFGCQGCQCDI-----GGSIGLACHEKTGGCQCRENVQGSQCNQ 798
Query: 198 CDVNHY 203
HY
Sbjct: 799 PTPGHY 804
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 96/245 (39%), Gaps = 58/245 (23%)
Query: 29 CQGDRDGPNCEKCRDNYYQK--------------SGDNFCTA-----CNCNPIGSLNLQC 69
C+ + G CE C + Y +G+ T C+C+ G+ C
Sbjct: 432 CKPNYTGETCESCAEGYMDFPHCYPVPDTPNGGGTGEQVLTVGEIINCDCHVAGTEGNAC 491
Query: 70 NSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
+ G C CKP GD C+ C F C C+C+ G + T CD GQC
Sbjct: 492 RKDPFVGACVCKPNYWGDSCETCAPG---FFGPSCLDCQCSGPGVLDGT--CDRESGQC- 545
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL------GHGGSLNLQCNS 180
Q R F+ + D YPL G+L C+S
Sbjct: 546 ----------------QCRSGFE---GFLCDQCAPGFFNYPLCQLCGCSPVGTLPQGCDS 586
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
GRC CKP G +C++C V ++ + C++C C+P G+ N NC + G C+C N
Sbjct: 587 TGRCLCKPEYDGPRCEQCIVGYHSYPH--CQACSCDPRGAADN--NC-TPTGHCQCHPNY 641
Query: 241 EGAQC 245
G C
Sbjct: 642 AGPSC 646
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-------GRCQ 76
G C+ C P+C C+ + C CNC+P G LQ +E G+C
Sbjct: 1434 GQCI-CPPRTIKPDCVVCQPQAFGCHPLVGCEECNCSPTG---LQNKTEPGCDIQTGQCT 1489
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
C P V G +C+RC Y G C+ C CN G + CD V GQC
Sbjct: 1490 CMPNVVGRRCERCAPGFY--GYPACRPCNCNRDGVELSI--CDPVTGQCH 1535
>gi|402864551|ref|XP_003896523.1| PREDICTED: laminin subunit beta-4 isoform 2 [Papio anubis]
Length = 1560
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD +Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CN GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNSLGSLPLL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 536
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 111/264 (42%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CPCNGFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCPCN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCFHNTQG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 1028
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
P+ GG L G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1029 VSPVECPPGGGACLCDPVTGACPCLPSVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS- 1087
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD + GQC CK G +C
Sbjct: 1088 -QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 90/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G ++C G
Sbjct: 989 GECLRCFHNTQGANCQLCKPGHYGSALNQTCRRCSCHASGVSPVECPPGGGACLCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPSVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -RCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCRCREGVSGQRC 1158
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 120/290 (41%), Gaps = 63/290 (21%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C ++++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECHPMQKVRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS-----LNLQCNSEGRC-----QCKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S + + S G C+ G CDRC Y
Sbjct: 323 DLQDNACRSCSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVK-------NTPNCDSVKGQC------ESAQLSSRGRVHT 138
C CEC+P G++ + P SV GQC E A+ H
Sbjct: 383 LKTISDPYACIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHY 442
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
L DP G + D + PL L C+ + G+C C VTG C+
Sbjct: 443 GLSAT-----DPLGCQPCDCN--SLGSLPL-------LTCDVDTGQCLCLSYVTGAHCEE 488
Query: 198 CDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C V ++ G GC C+C+ G+ N C GQCEC+ +V G C
Sbjct: 489 CTVGYWGLGNHLHGCSPCDCDIGGAYSNV--CSPKNGQCECRPHVTGRSC 536
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 75/181 (41%), Gaps = 17/181 (9%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C V+G +CDRC + FG C+SC CN + CD G C + +
Sbjct: 834 GQCPCHGEVSGRRCDRCLAGY--FGFPSCRSCPCNGFAEL-----CDPETGSCFNCGGFT 886
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP---LGHGGSLNLQCNSEGRCQCKPG 189
GR + E R +P+ + C D H NL +S+ C C G
Sbjct: 887 TGR-NCE-RCIDGYYGNPSSGQPCRPCLCPDDPSSNQYFAHSCYQNLW-SSDVICNCLQG 943
Query: 190 VTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
TG +C C Y A C+ C CN V + +C V G+C C N +GA C
Sbjct: 944 YTGTQCGECSTGFYGNPRISGAPCQPCPCNNNIDVTDPESCSRVTGECLRCFHNTQGANC 1003
Query: 246 R 246
+
Sbjct: 1004 Q 1004
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCK V G CDRC Y
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKSLVVGRCCDRCSPGSYGL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCHCHPQGSKDTV--CDLVTGQC 836
>gi|47218346|emb|CAG04178.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1960
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 98/223 (43%), Gaps = 30/223 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNF 53
C CN + C FD +Y TG+ GG C DC+ + G CE C Y+Q N
Sbjct: 372 CECNQHATTCHFDMAVYMTTGNVSGGVCDDCKHNTMGRQCELCAPFYFQHPNRDPRDPNV 431
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--GC 101
C CNC+P GSL + G+C+CK V G++CD C ++ G GC
Sbjct: 432 CEPCNCDPDGSLQGGLCDAHTDVVAGLISGQCRCKANVEGERCDNCRQGYFGMGRGPDGC 491
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
C CNP G++ CDS G C +L VH Q N + R C
Sbjct: 492 LPCACNPLGTLPRGSPCDSHTGSCFCKRL-----VHGNACDQCVPEHWGLSNDMDGCRPC 546
Query: 162 KRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
D HGG+LN C+ G+C C+ + G +CD+ + Y
Sbjct: 547 DCD-----HGGALNNNCDPHSGQCVCREHMLGRRCDQMEPGFY 584
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS---------EGR 74
G CL C +G C+ C+ YY + C C C+P+G+L C+S G+
Sbjct: 1103 GACLRCLHHTEGYACQHCKAGYYGNAATQSCRKCTCDPVGTLPRACSSPEECACDQQSGQ 1162
Query: 75 CQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNP 108
C CKP V G CDRC + ++ G GC++C+C+P
Sbjct: 1163 CPCKPNVVGQDCDRCAPDTWNMAGGTGCRTCDCDP 1197
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 55 TACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
AC C+P GSL+ C + G +CQC+P V G CD C Y FG +GC++CEC+P GS
Sbjct: 853 VACQCDPQGSLSALCEASGGQCQCRPNVVGRNCDSCAPATYRFGPSGCRACECDPRGSA- 911
Query: 114 NTPNCDSVKGQC 125
T C GQC
Sbjct: 912 -TSFCHQETGQC 922
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C + G +CQC+P V G CD C Y FG +GC++CEC+P GS T C
Sbjct: 861 GSLSALCEASGGQCQCRPNVVGRNCDSCAPATYRFGPSGCRACECDPRGSA--TSFCHQE 918
Query: 231 KGQCECKDNVEGAQC 245
GQC C G QC
Sbjct: 919 TGQCTCLPGATGRQC 933
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
GG C C+ + G NC+ C Y + G + C AC C+P GS C+ E G+C C PG
Sbjct: 871 GGQC-QCRPNVVGRNCDSCAPATY-RFGPSGCRACECDPRGSATSFCHQETGQCTCLPGA 928
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
TG +C C H+ F + C+ C CN ++ +C GQC+
Sbjct: 929 TGRQCSHCLPGHWGFPQ--CRPCHCN-----GHSDSCHPQTGQCQ 966
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C+CK V G++CD C ++ G GC C CNP G++ CDS G C CK
Sbjct: 461 GQCRCKANVEGERCDNCRQGYFGMGRGPDGCLPCACNPLGTLPRGSPCDSHTGSCFCKRL 520
Query: 240 VEGAQC 245
V G C
Sbjct: 521 VHGNAC 526
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 95/244 (38%), Gaps = 50/244 (20%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPG 80
G GGHC C DGP +SG +F +C + C C PG
Sbjct: 1019 GSGGHCRPCTCP-DGP-----------RSGRHFSDSCYV---------LAQQLVCVCSPG 1057
Query: 81 VTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
G +C+ C ++ C C+CN + + +CD+ G C R H
Sbjct: 1058 YKGPRCEECAPGYFGNPSVPGGRCVPCQCNNNIDMHDPGSCDAQTGAC------LRCLHH 1111
Query: 138 TELRVQSRKNFDPAGNRIWDL-RRCKRDTYPLGHGGSLNLQCNS---------EGRCQCK 187
TE GN R+C D G+L C+S G+C CK
Sbjct: 1112 TEGYACQHCKAGYYGNAATQSCRKCTCDPV-----GTLPRACSSPEECACDQQSGQCPCK 1166
Query: 188 PGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPN----CDSVKGQCECKDNVEG 242
P V G CDRC + ++ G GC++C+C+P S ++ N + G+C CK G
Sbjct: 1167 PNVVGQDCDRCAPDTWNMAGGTGCRTCDCDPDHSFGSSCNEASQAHEITGRCSCKPGFGG 1226
Query: 243 AQCR 246
CR
Sbjct: 1227 RTCR 1230
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C CK V G+ CD+C H+ GC+ C+C+ G++ N NCD GQC C+++
Sbjct: 513 GSCFCKRLVHGNACDQCVPEHWGLSNDMDGCRPCDCDHGGALNN--NCDPHSGQCVCREH 570
Query: 240 VEGAQC 245
+ G +C
Sbjct: 571 MLGRRC 576
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
D C+ + G +C+C+P GS+ C++ GQC+ + + GR + +
Sbjct: 835 DICNSYIFSVSALLHKGAVACQCDPQGSLSAL--CEASGGQCQ-CRPNVVGR-NCDSCAP 890
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH 202
+ F P+G R C+ D P G S C+ E G+C C PG TG +C C H
Sbjct: 891 ATYRFGPSG-----CRACECD--PRGSATSF---CHQETGQCTCLPGATGRQCSHCLPGH 940
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQC 245
+ F + C+ C CN ++ +C GQC+ C+D G C
Sbjct: 941 WGFPQ--CRPCHCN-----GHSDSCHPQTGQCQGCRDFTTGHHC 977
>gi|341887434|gb|EGT43369.1| hypothetical protein CAEBREN_17090 [Caenorhabditis brenneri]
Length = 3711
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 133/306 (43%), Gaps = 82/306 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS----------- 49
C+CNG S C D G C DC+ + G +CE C + +Y +
Sbjct: 1830 CDCNGHSATCDPDT---------GICTDCEHNTHGDHCEFCDEGHYGNATNGSPYDCMAC 1880
Query: 50 ------GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE----- 98
+NF +C+ + G L LQCN CKPG TGD+CDRC + FG+
Sbjct: 1881 ACPFAPSNNFAKSCDVSEEGQL-LQCN------CKPGYTGDRCDRCAAGY--FGQPQQVG 1931
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ-------SRKNF--- 148
C+ C+CN ++ ++ C V G C + ++ GR H E Q + KN
Sbjct: 1932 GSCEPCQCNGNNNLTDSRACHPVSGDCYLCEQNTDGR-HCEWCAQWFYGDAVAAKNCSSC 1990
Query: 149 --DPAGNRIWDLR----------------RCKRDTYPLGH----------GGSLNLQCNS 180
D G++ D + RCK D + + N QCN
Sbjct: 1991 ECDQCGSQYCDNKSGGCECKTNVEGDSCDRCKPDHWGFSKCQGCQACHCGTAAFNTQCNV 2050
Query: 181 E-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
E G+C C+PG TG +C+ C+ ++++GE GC C+C S+ CD GQC C++
Sbjct: 2051 ENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCESDLSMGTV--CDVRTGQCHCQEG 2108
Query: 240 VEGAQC 245
G++C
Sbjct: 2109 ATGSRC 2114
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 99/227 (43%), Gaps = 28/227 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C G+ G C+KC +Y C C C G+ C++ G+C CK G++CDR
Sbjct: 630 CNGNFTGRTCDKCAAGFYNYPD---CRGCECLIAGAKGQTCDNNGQCYCKGNFEGERCDR 686
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C N Y+F C+ C CNP+G ++ CD V G+ S + GR+
Sbjct: 687 CKPNFYNF--PICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRI----------- 733
Query: 148 FDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
D WDL+ D G LN G+C CK G CD+C
Sbjct: 734 CDQCKPTFWDLQYHHEDGCRSCDCNTNGTISGLNTCDLKTGQCLCKKNAAGRSCDQCAEG 793
Query: 202 HY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F + GC+SC C+ G+++ CD GQC+C+ V G +C
Sbjct: 794 FYRLNSFNQLGCESCHCDIGGALR--AECDIQSGQCKCRPRVTGLRC 838
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 105/217 (48%), Gaps = 37/217 (17%)
Query: 41 CRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
C+ + + D + +C+C GS + QC G +C+CKP V G +C+RC +Y+F
Sbjct: 1396 CKQKIFSLTTDFNSAALSCDCVAQGSESFQCEEYGGQCKCKPNVIGRRCERCAPGYYNFP 1455
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR-----VQSRKNFDPAG 152
E C C+CN AG CD GQC H E + V + +DP
Sbjct: 1456 E--CIKCQCN-AGQ-----QCDERTGQCFCPP-------HVEGQTCDRCVSNAFGYDP-- 1498
Query: 153 NRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
L C++ +P G G NL C+ E G+C C+ + G +CDRC Y F C
Sbjct: 1499 -----LIGCQKCGCHPQGSEGG-NLVCDPESGQCLCRESMGGRQCDRCLAGFYGFPH--C 1550
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C CN G+ ++ CD+ QC+CK+NV GA+C +
Sbjct: 1551 YGCSCNRDGTTEDI--CDATNAQCKCKENVYGARCEA 1585
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 91/199 (45%), Gaps = 51/199 (25%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQ----CNSEGRCQCKPGV 81
C+G+ +G C++C+ N+Y NF C CNCNP G + + Q + C C+ V
Sbjct: 675 CKGNFEGERCDRCKPNFY-----NFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHV 729
Query: 82 TGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TG CD+C +D E GC+SC+CN G++ CD GQC
Sbjct: 730 TGRICDQCKPTFWDLQYHHEDGCRSCDCNTNGTISGLNTCDLKTGQC------------- 776
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-------------GGSLNLQCNSE-GRC 184
+KN A R D +C Y L GG+L +C+ + G+C
Sbjct: 777 ----LCKKN---AAGRSCD--QCAEGFYRLNSFNQLGCESCHCDIGGALRAECDIQSGQC 827
Query: 185 QCKPGVTGDKCDRCDVNHY 203
+C+P VTG +CDR NHY
Sbjct: 828 KCRPRVTGLRCDRPIENHY 846
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 18/139 (12%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC G SN C++D+++ + G+ GG C++C+ + +G NC KC Y++ G
Sbjct: 356 CNCFGRSNECYYDEQVDLNNQSLDSQGNYEGGGVCVNCRDNTEGINCNKCSYGYFRPEGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
++ C AC+CNP + G+C+C+ G+ CD+C +YD E CK CEC
Sbjct: 416 DWKDPQPCKACDCNPDKHTGACAETTGKCECQARFVGENCDQCAPGYYDPPE--CKPCEC 473
Query: 107 NPAGSVKNTPNCDSVKGQC 125
G+V + C GQC
Sbjct: 474 FVNGTVGDV--CLPEDGQC 490
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 105/239 (43%), Gaps = 48/239 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ G C++C YY G C AC C+ G + +C+S G+C C T
Sbjct: 580 GQCL-CKEGFAGDKCDRCDIAYY---GYPNCKACACDGAGITSPECDSTSGQCPCNGNFT 635
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C Y++ + C+ CEC AG+ T CD+ GQC
Sbjct: 636 GRTCDKCAAGFYNYPD--CRGCECLIAGAKGQT--CDN-NGQC----------------- 673
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTY--PL-------GHGGSLNLQ----CNSEGRCQCKPG 189
+ NF+ G R RCK + Y P+ G + + Q + C C+
Sbjct: 674 YCKGNFE--GER---CDRCKPNFYNFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKH 728
Query: 190 VTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG CD+C +D E GC+SC+CN G++ CD GQC CK N G C
Sbjct: 729 VTGRICDQCKPTFWDLQYHHEDGCRSCDCNTNGTISGLNTCDLKTGQCLCKKNAAGRSC 787
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 45/207 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G C C+ + DG +CE C +Y GD C++C C+ GS N G C+CK
Sbjct: 1956 GDCYLCEQNTDGRHCEWCAQWFY---GDAVAAKNCSSCECDQCGSQYCD-NKSGGCECKT 2011
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V GD CDRC +H+ F + GC++C C G+ C+ GQC ++ R
Sbjct: 2012 NVEGDSCDRCKPDHWGFSKCQGCQACHC---GTAAFNTQCNVENGQCTCRPGATGMRC-- 2066
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSE-GRCQCK 187
C+ + G G S+ C+ G+C C+
Sbjct: 2067 --------------------EHCEHGYWNYGEHGCDKCDCESDLSMGTVCDVRTGQCHCQ 2106
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G TG +CD+C ++ GC+ C+
Sbjct: 2107 EGATGSRCDQCLPSYLRIPVHGCRRCD 2133
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPG 80
G CL C+ + G +C++C + +Y+ + N C +C+C+ G+L +C+ + G+C+C+P
Sbjct: 774 GQCL-CKKNAAGRSCDQCAEGFYRLNSFNQLGCESCHCDIGGALRAECDIQSGQCKCRPR 832
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR-VHTE 139
VTG +CDR NHY F E A + P +V + + A S RG V +
Sbjct: 833 VTGLRCDRPIENHY-FPTLWHNQYEAEDAHTEDQRPVRFAVDPE-QFANFSWRGYAVFSP 890
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
++ + + D ++ L R+ P+ ++++
Sbjct: 891 IQEKILIDVDITKASVYRLLFRYRNPTPVPITATVSI 927
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 82/210 (39%), Gaps = 48/210 (22%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCK 78
+GG C C+ + G CE+C YY NF C C CN QC+ G+C C
Sbjct: 1429 YGGQC-KCKPNVIGRRCERCAPGYY-----NFPECIKCQCNA----GQQCDERTGQCFCP 1478
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CDRC N + + GC+ C C+P GS CD GQC +
Sbjct: 1479 PHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRE-------- 1530
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH---------GGSLNLQCNSEGRCQCKP 188
G R D RC Y H G + ++ + +C+CK
Sbjct: 1531 ------------SMGGRQCD--RCLAGFYGFPHCYGCSCNRDGTTEDICDATNAQCKCKE 1576
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
V G +C+ C +D GC +C C
Sbjct: 1577 NVYGARCEACKAGTFDLSAENPLGCVNCFC 1606
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 89/234 (38%), Gaps = 76/234 (32%)
Query: 29 CQGDRDGPNCEKCRDNYYQ-KSGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVT 82
C GP+C+ C Y++ SG F C C+CN + C+ + G C C+
Sbjct: 1798 CPAPYTGPSCQLCASGYHRVASGSGFLGACVPCDCN---GHSATCDPDTGICTDCEHNTH 1854
Query: 83 GDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
GD C+ CD HY G C +C C A S +CD +S G++
Sbjct: 1855 GDHCEFCDEGHYGNATNGSPYDCMACACPFAPSNNFAKSCD----------VSEEGQL-- 1902
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
LQCN CKPG TGD+CDRC
Sbjct: 1903 -------------------------------------LQCN------CKPGYTGDRCDRC 1919
Query: 199 DVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQCR 246
+ FG+ C+ C+CN ++ ++ C V G C C+ N +G C
Sbjct: 1920 AAGY--FGQPQQVGGSCEPCQCNGNNNLTDSRACHPVSGDCYLCEQNTDGRHCE 1971
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 148 FDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 206
F P G D + CK D P H G+ + G+C+C+ G+ CD+C +YD
Sbjct: 410 FRPEGVDWKDPQPCKACDCNPDKHTGAC---AETTGKCECQARFVGENCDQCAPGYYDPP 466
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
E CK CEC G+V + C GQC CK G C
Sbjct: 467 E--CKPCECFVNGTVGDV--CLPEDGQCPCKPGFGGTFC 501
>gi|194860156|ref|XP_001969522.1| GG23914 [Drosophila erecta]
gi|190661389|gb|EDV58581.1| GG23914 [Drosophila erecta]
Length = 3372
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C + G C+KCR ++ + D C C C+P GS +CN G+C CK GV G C+
Sbjct: 1168 CLANVTGRRCDKCRPGHWNLTADEGCRDCRCDPHGSRGHECNPWTGQCDCKIGVGGQHCN 1227
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGR-----VHTELR 141
C Y F GC+ C C G V CD G+C + +RG V
Sbjct: 1228 ECTEGFYGFNNEGCQRCSACRSEGQV-----CDPHNGRCICPKF-TRGLGCGQCVPGTWD 1281
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
Q+R R C D H GS+ CN+ +G+CQC+ G +G KCD C V
Sbjct: 1282 WQARLG----------CRECDCD-----HIGSIGQHCNTGDGQCQCREGYSGRKCDTCAV 1326
Query: 201 NHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
++ + E C+ C C+P GS + CDS GQC CK V G +C
Sbjct: 1327 GYFGYPE--CRRCGCDPEGSFTQADGSIACDS-NGQCPCKSLVVGLKC 1371
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 111/290 (38%), Gaps = 90/290 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG SN C G+C DC + G CE+C+ YY
Sbjct: 849 CPCNGHSNSCDL---------QSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTPHDCKRC 899
Query: 47 ----QKSGDNFCTACNCNPIGSLNLQCNSEGR-------CQCKPGVTGDKCDRCDVNHY- 94
+ +NF +C ++L E QC G TGD C CD ++
Sbjct: 900 ACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFG 959
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G + C+ C+C AG C+ G+C + + ++ G
Sbjct: 960 NPRQLG-SSCQRCDC--AGG-----PCNVTTGECITCRGNTEG----------------- 994
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCN----------------SEGRCQCKPGVTGDKC 195
W RCK LG+ G + C+ ++G+C CKP G KC
Sbjct: 995 ----WHCERCK-----LGYWGDPAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKC 1045
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CDV + + E C SC C+P GS+ CD GQC CK V GA+C
Sbjct: 1046 NECDVGYANV-ELRCPSCNCDPLGSLVQD-RCDPHTGQCHCKLGVMGAKC 1093
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 59/238 (24%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL-QCNSE-GRCQCKPGV 81
G CL C+ G C +C Y + + C +CNC+P+GSL +C+ G+C CK GV
Sbjct: 1032 GQCL-CKPRYAGQKCNECDVGY--ANVELRCPSCNCDPLGSLVQDRCDPHTGQCHCKLGV 1088
Query: 82 TGDKCDRCDVNHYDFGEAG-----CKSCECNPAGS------VKNT--PNCDSVKGQCESA 128
G KC C ++ + N G V +T PN +S CE
Sbjct: 1089 MGAKCHECQDGYFGMNAVAERMDDLAALRQNSDGDDDDWELVPDTEDPNSESAVA-CEEC 1147
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
SS G + ++ C + T G+C C
Sbjct: 1148 HCSSVGSLSSD---------------------CDKRT----------------GQCACLA 1170
Query: 189 GVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG +CD+C H++ + GC+ C C+P GS + C+ GQC+CK V G C
Sbjct: 1171 NVTGRRCDKCRPGHWNLTADEGCRDCRCDPHGSRGH--ECNPWTGQCDCKIGVGGQHC 1226
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 29 CQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGD 84
C+ G CE+C+ Y+ + + C CNC+P G C+ E GRC C+ GVTG
Sbjct: 1739 CKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGVRTEGCDIETGRCYCREGVTGL 1798
Query: 85 KCDRCDVNHYDFGEAGCKSCE 105
KCD+C + E GC+ C+
Sbjct: 1799 KCDKCQAERHHLVENGCRICD 1819
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 22/135 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C+CNG S+ C D+E G C C+G+ G +C +C + +Y + + C AC C
Sbjct: 1667 CHCNGRSSDC--DRE-------TGVCQGCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPC 1717
Query: 60 NPIGSLNLQ-----CNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAG 110
P + N + E C CKPG TG C+RC ++ + C+ C C+P G
Sbjct: 1718 -PETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDG 1776
Query: 111 SVKNTPNCDSVKGQC 125
T CD G+C
Sbjct: 1777 V--RTEGCDIETGRC 1789
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
E C CKPG TG C+RC ++ + C+ C C+P G T CD G+C C
Sbjct: 1734 EVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGV--RTEGCDIETGRCYC 1791
Query: 237 KDNVEGAQC 245
++ V G +C
Sbjct: 1792 REGVTGLKC 1800
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 63/149 (42%), Gaps = 32/149 (21%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C +C G NCE+C YY GD C C C+ GS + + G CQCK V
Sbjct: 518 GGSC-NCLEGFQGKNCEECAPGYY---GDE-CKRCECDERGSRGSKGSCSGVCQCKLNVE 572
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C C ++D GC SC C+ V C SA+L +
Sbjct: 573 GSTCSECAPGYFDLSAENADGCTSCWCS------------GVSQTCHSAKLQT------- 613
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
L ++ ++ +I D++R K + P+
Sbjct: 614 LAFETLNDW-----KITDIQRVKPISIPV 637
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C G + C +D L G C C + G CE C +Y++ C C
Sbjct: 449 CQCYGHAESCTYDSYL-----DKGICQSCSNNTAGNECEFCEMGFYRELDAPLTDPCLPC 503
Query: 58 NCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
+CNP S C S+ G C C G G C+ C +Y G+ CK CEC+ GS +
Sbjct: 504 SCNPARSTG-GCQSDGGSCNCLEGFQGKNCEECAPGYY--GDE-CKRCECDERGSRGSKG 559
Query: 117 NCDSV 121
+C V
Sbjct: 560 SCSGV 564
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
GRC C+ GVTG KCD+C + E GC+ C+
Sbjct: 1787 GRCYCREGVTGLKCDKCQAERHHLVENGCRICD 1819
>gi|449668161|ref|XP_002161694.2| PREDICTED: uncharacterized protein LOC100197510 [Hydra
magnipapillata]
Length = 1576
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 100/227 (44%), Gaps = 49/227 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S++C D G CL+CQ + G +C+ C+ +Y + N C CNC+
Sbjct: 424 CACNGNSDQCTRD----------GICLNCQFNSMGNSCQFCKSGFYGNALINQCLGCNCH 473
Query: 61 PIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
GS N C+ G+C CKPGV G C +C N++ +GC C CN GS +
Sbjct: 474 IFGSYNASCDMVTGQCYCKPGVVGQTCSKCAPNYFGLSPSGCSPCNCNAFGSSEQ----- 528
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH--------- 170
QC +A G+ VQ K +CK + L
Sbjct: 529 ----QCNNA-----GQCSCFTDVQGLK-----------CDKCKVGYFGLPAKPCSPCECH 568
Query: 171 --GGSLNLQCNSE--GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
G LN C ++ G+C CKPGV G C +C + DFG GCK C
Sbjct: 569 LVGTILNTNCVNDIFGQCSCKPGVEGRDCGQCQKQYSDFGINGCKQC 615
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS QCN+ G+C C V G KCD+C V ++ C CEC+ G++ NT + +
Sbjct: 524 GSSEQQCNNAGQCSCFTDVQGLKCDKCKVGYFGLPAKPCSPCECHLVGTILNTNCVNDIF 583
Query: 232 GQCECKDNVEGAQC 245
GQC CK VEG C
Sbjct: 584 GQCSCKPGVEGRDC 597
>gi|402882065|ref|XP_003904574.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Papio
anubis]
Length = 3694
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 97/234 (41%), Gaps = 45/234 (19%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
CQ GP+C++C Y+ G C C C+P G+L+ C + G C+C+PG TG C
Sbjct: 607 CQPGFAGPHCDQCHPGYH---GFPNCQPCTCDPRGALDQLCGAGGLCRCRPGYTGTACQE 663
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR----VQS 144
C + F C C C+ GS+ CD GQC S R RV T LR V
Sbjct: 664 CSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRCDTCVPG 713
Query: 145 RKNFD--------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
NF PAG + D P ++ C C+ V G CD
Sbjct: 714 AYNFPYCEAGSCHPAGLALVD------PALP-----------EAQAPCVCRANVEGPSCD 756
Query: 197 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
RC + + GC C C+P G++ C GQC CK +V G C +
Sbjct: 757 RCKPGFWGLSPSNPEGCTRCSCDPRGTLGGVAECQPGTGQCFCKPHVCGQACAA 810
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 101/259 (38%), Gaps = 60/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G + C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 359 CNCHGHATDCYYDPEVDQRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPDH 418
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC + + GRC C+P +G++CD C G G SC
Sbjct: 419 PLDSPHVCRRCNCESNFTDGTCEDLTGRCYCRPNFSGERCDVCAE-----GFTGFPSCYL 473
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P+ S +R+ PAG + C D
Sbjct: 474 TPSSSND------------------------------TREQVLPAGQIV----NC--DCS 497
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G G+ + GRC CKP G C+ C Y GC+ C+C+ G +
Sbjct: 498 AAGTQGNACRKDPRVGRCVCKPNFQGTHCELCVPGFYG---PGCQPCQCSSPGVADD--R 552
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD G+C C++ EGA C
Sbjct: 553 CDPDTGRCRCREGFEGATC 571
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 105/265 (39%), Gaps = 47/265 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+DCQ + +G CE+C+ + D C +C
Sbjct: 1864 CQCHGHSDRCLPGS---------GICVDCQHNTEGAQCERCQAGFVSSREDPSAPCVSCP 1914
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1915 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1974
Query: 110 GSVKNTPNC-----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR- 163
G PN D + G C + G N GN C R
Sbjct: 1975 GD----PNLLFSDSDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGN-------CTRC 2023
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSV 221
D P G CN G+C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2024 DCAPCGTEA-----CNPHSGQCLCKAGVTGRRCDRCQEGHFGFEGCGGCRPCACGPAAEG 2078
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2079 SE---CHPQSGQCHCRPGTMGPQCR 2100
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 81/211 (38%), Gaps = 41/211 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1971 CSGNGDPNLLFSDSDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC 2025
Query: 60 NPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPN 117
P G+ CN G+C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2026 APCGTEA--CNPHSGQCLCKAGVTGRRCDRCQEGHFGFEGCGGCRPCACGPAAEGSE--- 2080
Query: 118 CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ 177
C GQC G R C + L G Q
Sbjct: 2081 CHPQSGQCHCR----------------------PGTMGPQCRECAPGYWGLPEQGCRRCQ 2118
Query: 178 CNS------EGRCQCKPGVTGDKCDRCDVNH 202
C GRC C PG++G++CD C H
Sbjct: 2119 CPGGRCDPHTGRCTCPPGLSGERCDTCSQQH 2149
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C+ V G C RC ++ F C+ C+C
Sbjct: 1438 CGCHEVGATGPTCEPFGGQCPCRAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1488
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P + C+ T+ PL
Sbjct: 1489 RLCDELTGQC----------------ICPPRTVPP------ECLLCQPQTFGCHPLVGCE 1526
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1527 ECNCSGPGVQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPHCRPCDCHEAGT 1584
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1585 APGV--CDPLTGQCYCKENVQGPRC 1607
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 49/204 (24%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 494 CDCSAAGTQGNACRKDPRVGRCVCKPNFQGTHCELCVPGFYG---PGCQPCQCSSPGVAD 550
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPL 168
+ CD G+C + R+ F+ A C R +PL
Sbjct: 551 D--RCDPDTGRC-----------------RCREGFEGA--------TCDRCAPGYFRFPL 583
Query: 169 ------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
G+L C+ GRC C+PG G CD+C ++ F C+ C C+P G++
Sbjct: 584 CQLCGCSPAGTLPEGCDEAGRCPCQPGFAGPHCDQCHPGYHGF--PNCQPCTCDPRGALD 641
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 642 QL--CGA-GGLCRCRPGYTGTACQ 662
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ + +GP+C++C+ ++ S N CT C+C+P G+L +C G+C CKP V G
Sbjct: 746 CRANVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDPRGTLGGVAECQPGTGQCFCKPHVCG 805
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 806 QACAACRDGFFGLDQADYFGCRSCRCDAGGALGQS--CEPRTGAC 848
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C+C P G CD G+C C +
Sbjct: 2086 GQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGRCTCPPGLS 2138
Query: 242 GAQC 245
G +C
Sbjct: 2139 GERC 2142
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 69/183 (37%), Gaps = 21/183 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL---QCNSEGRCQCKPGVTGDK 85
C+ G C+ C Y +C A +C+P G + ++ C C+ V G
Sbjct: 698 CRPRVTGLRCDTCVPGAYNFP---YCEAGSCHPAGLALVDPALPEAQAPCVCRANVEGPS 754
Query: 86 CDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
CDRC + + GC C C+P G++ C GQC + V +
Sbjct: 755 CDRCKPGFWGLSPSNPEGCTRCSCDPRGTLGGVAECQPGTGQC-----FCKPHVCGQACA 809
Query: 143 QSRKNFDPAGNR-IWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 200
R F + R C+ D GG+L C G C+C+P G C R
Sbjct: 810 ACRDGFFGLDQADYFGCRSCRCDA-----GGALGQSCEPRTGACRCRPNTQGPTCSRPVR 864
Query: 201 NHY 203
+HY
Sbjct: 865 DHY 867
>gi|341894711|gb|EGT50646.1| hypothetical protein CAEBREN_11682 [Caenorhabditis brenneri]
Length = 3675
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 133/306 (43%), Gaps = 82/306 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS----------- 49
C+CNG S C D G C DC+ + G +CE C + +Y +
Sbjct: 1830 CDCNGHSATCDPDT---------GICTDCEHNTHGDHCEFCDEGHYGNATNGSPYDCMAC 1880
Query: 50 ------GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE----- 98
+NF +C+ + G L LQCN CKPG TGD+CDRC + FG+
Sbjct: 1881 ACPFAPSNNFAKSCDVSEEGQL-LQCN------CKPGYTGDRCDRCAAGY--FGQPQQVG 1931
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ-------SRKNF--- 148
C+ C+CN ++ ++ C V G C + ++ GR H E Q + KN
Sbjct: 1932 GSCEPCQCNGNNNLTDSRACHPVSGDCYLCEQNTDGR-HCEWCAQWFYGDAVAAKNCSSC 1990
Query: 149 --DPAGNRIWDLR----------------RCKRDTYPLGH----------GGSLNLQCNS 180
D G++ D + RCK D + + N QCN
Sbjct: 1991 ECDQCGSQYCDNKSGGCECKTNVEGDSCDRCKPDHWGFSKCQGCQACHCGTAAFNTQCNV 2050
Query: 181 E-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
E G+C C+PG TG +C+ C+ ++++GE GC C+C S+ CD GQC C++
Sbjct: 2051 ENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCESDLSMGTV--CDVRTGQCHCQEG 2108
Query: 240 VEGAQC 245
G++C
Sbjct: 2109 ATGSRC 2114
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 99/227 (43%), Gaps = 28/227 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C G+ G C+KC +Y C C C G+ C++ G+C CK G++CDR
Sbjct: 630 CNGNFTGRTCDKCAAGFYNYPD---CRGCECLIAGAKGQTCDNNGQCYCKGNFEGERCDR 686
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C N Y+F C+ C CNP+G ++ CD V G+ S + GR+
Sbjct: 687 CKPNFYNF--PICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRI----------- 733
Query: 148 FDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
D WDL+ D G LN G+C CK G CD+C
Sbjct: 734 CDQCKPTFWDLQYHHEDGCRSCDCNTNGTISGLNTCDLKTGQCMCKKNAAGRSCDQCAEG 793
Query: 202 HY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F + GC+SC C+ G+++ CD GQC+C+ V G +C
Sbjct: 794 FYRLNSFNQLGCESCHCDIGGALR--AECDIQSGQCKCRPRVTGLRC 838
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 105/217 (48%), Gaps = 37/217 (17%)
Query: 41 CRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
C+ + + D + +C+C GS + QC G +C+CKP V G +C+RC +Y+F
Sbjct: 1396 CKQKIFSLTTDFNSAALSCDCVAQGSESFQCEEYGGQCKCKPNVIGRRCERCAPGYYNFP 1455
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR-----VQSRKNFDPAG 152
E C C+CN AG CD GQC H E + V + +DP
Sbjct: 1456 E--CIKCQCN-AGQ-----QCDERTGQCFCPP-------HVEGQTCDRCVSNAFGYDP-- 1498
Query: 153 NRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
L C++ +P G G NL C+ E G+C C+ + G +CDRC Y F C
Sbjct: 1499 -----LIGCQKCGCHPQGSEGG-NLVCDPESGQCLCRESMGGRQCDRCLAGFYGFPH--C 1550
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C CN G+ ++ CD+ QC+CK+NV GA+C +
Sbjct: 1551 YGCSCNRDGTTEDI--CDATNAQCKCKENVYGARCEA 1585
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 91/199 (45%), Gaps = 51/199 (25%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQ----CNSEGRCQCKPGV 81
C+G+ +G C++C+ N+Y NF C CNCNP G + + Q + C C+ V
Sbjct: 675 CKGNFEGERCDRCKPNFY-----NFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHV 729
Query: 82 TGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TG CD+C +D E GC+SC+CN G++ CD GQC
Sbjct: 730 TGRICDQCKPTFWDLQYHHEDGCRSCDCNTNGTISGLNTCDLKTGQC------------- 776
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-------------GGSLNLQCNSE-GRC 184
+KN A R D +C Y L GG+L +C+ + G+C
Sbjct: 777 ----MCKKN---AAGRSCD--QCAEGFYRLNSFNQLGCESCHCDIGGALRAECDIQSGQC 827
Query: 185 QCKPGVTGDKCDRCDVNHY 203
+C+P VTG +CDR NHY
Sbjct: 828 KCRPRVTGLRCDRPIENHY 846
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 18/139 (12%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC G SN C++D+++ + G+ GG C++C+ + +G NC KC Y++ G
Sbjct: 356 CNCFGRSNECYYDEQVDLNNQSLDSQGNYEGGGVCVNCRDNTEGINCNKCSYGYFRPEGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
++ C AC+CNP + G+C+C+ G+ CD+C +YD E CK CEC
Sbjct: 416 DWKDPQPCKACDCNPDKHTGACAETTGKCECQARFVGENCDQCAPGYYDPPE--CKPCEC 473
Query: 107 NPAGSVKNTPNCDSVKGQC 125
G+V + C GQC
Sbjct: 474 FVNGTVGDV--CLPEDGQC 490
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 105/239 (43%), Gaps = 48/239 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ G C++C YY G C AC C+ G + +C+S G+C C T
Sbjct: 580 GQCL-CKEGFAGDKCDRCDIAYY---GYPNCKACACDGAGITSPECDSTSGQCPCNGNFT 635
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C Y++ + C+ CEC AG+ T CD+ GQC
Sbjct: 636 GRTCDKCAAGFYNYPD--CRGCECLIAGAKGQT--CDN-NGQC----------------- 673
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTY--PL-------GHGGSLNLQ----CNSEGRCQCKPG 189
+ NF+ G R RCK + Y P+ G + + Q + C C+
Sbjct: 674 YCKGNFE--GER---CDRCKPNFYNFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKH 728
Query: 190 VTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG CD+C +D E GC+SC+CN G++ CD GQC CK N G C
Sbjct: 729 VTGRICDQCKPTFWDLQYHHEDGCRSCDCNTNGTISGLNTCDLKTGQCMCKKNAAGRSC 787
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 45/207 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G C C+ + DG +CE C +Y GD C++C C+ GS N G C+CK
Sbjct: 1956 GDCYLCEQNTDGRHCEWCAQWFY---GDAVAAKNCSSCECDQCGSQYCD-NKSGGCECKT 2011
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V GD CDRC +H+ F + GC++C C G+ C+ GQC ++ R
Sbjct: 2012 NVEGDSCDRCKPDHWGFSKCQGCQACHC---GTAAFNTQCNVENGQCTCRPGATGMRC-- 2066
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSE-GRCQCK 187
C+ + G G S+ C+ G+C C+
Sbjct: 2067 --------------------EHCEHGYWNYGEHGCDKCDCESDLSMGTVCDVRTGQCHCQ 2106
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G TG +CD+C ++ GC+ C+
Sbjct: 2107 EGATGSRCDQCLPSYLRIPVHGCRRCD 2133
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 82/210 (39%), Gaps = 48/210 (22%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCK 78
+GG C C+ + G CE+C YY NF C C CN QC+ G+C C
Sbjct: 1429 YGGQC-KCKPNVIGRRCERCAPGYY-----NFPECIKCQCNA----GQQCDERTGQCFCP 1478
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CDRC N + + GC+ C C+P GS CD GQC +
Sbjct: 1479 PHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRE-------- 1530
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH---------GGSLNLQCNSEGRCQCKP 188
G R D RC Y H G + ++ + +C+CK
Sbjct: 1531 ------------SMGGRQCD--RCLAGFYGFPHCYGCSCNRDGTTEDICDATNAQCKCKE 1576
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
V G +C+ C +D GC +C C
Sbjct: 1577 NVYGARCEACKAGTFDLSAENPLGCVNCFC 1606
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPG 80
G C+ C+ + G +C++C + +Y+ + N C +C+C+ G+L +C+ + G+C+C+P
Sbjct: 774 GQCM-CKKNAAGRSCDQCAEGFYRLNSFNQLGCESCHCDIGGALRAECDIQSGQCKCRPR 832
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR-VHTE 139
VTG +CDR NHY F E A + P +V + + A S RG V +
Sbjct: 833 VTGLRCDRPIENHY-FPTLWHNQYEAEDAHTEDQRPVRFAVDPE-QFANFSWRGYAVFSP 890
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
++ + + D ++ L R+ P+ ++++
Sbjct: 891 IQEKILIDVDITKASVYRLLFRYRNPTPVPITATVSI 927
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNP---IGSLNLQCNSEGRCQCK 78
G C+ G C++C+ ++ Q ++ C +C+CN I LN G+C CK
Sbjct: 720 GELCSCRKHVTGRICDQCKPTFWDLQYHHEDGCRSCDCNTNGTISGLNTCDLKTGQCMCK 779
Query: 79 PGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G CD+C Y F + GC+SC C+ G+++ CD GQC+
Sbjct: 780 KNAAGRSCDQCAEGFYRLNSFNQLGCESCHCDIGGALR--AECDIQSGQCK 828
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 89/234 (38%), Gaps = 76/234 (32%)
Query: 29 CQGDRDGPNCEKCRDNYYQ-KSGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVT 82
C GP+C+ C Y++ SG F C C+CN + C+ + G C C+
Sbjct: 1798 CPAPYTGPSCQLCASGYHRVASGSGFLGACVPCDCN---GHSATCDPDTGICTDCEHNTH 1854
Query: 83 GDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
GD C+ CD HY G C +C C A S +CD +S G++
Sbjct: 1855 GDHCEFCDEGHYGNATNGSPYDCMACACPFAPSNNFAKSCD----------VSEEGQL-- 1902
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
LQCN CKPG TGD+CDRC
Sbjct: 1903 -------------------------------------LQCN------CKPGYTGDRCDRC 1919
Query: 199 DVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQCR 246
+ FG+ C+ C+CN ++ ++ C V G C C+ N +G C
Sbjct: 1920 AAGY--FGQPQQVGGSCEPCQCNGNNNLTDSRACHPVSGDCYLCEQNTDGRHCE 1971
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 148 FDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 206
F P G D + CK D P H G+ + G+C+C+ G+ CD+C +YD
Sbjct: 410 FRPEGVDWKDPQPCKACDCNPDKHTGAC---AETTGKCECQARFVGENCDQCAPGYYDPP 466
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
E CK CEC G+V + C GQC CK G C
Sbjct: 467 E--CKPCECFVNGTVGDV--CLPEDGQCPCKPGFGGTFC 501
>gi|410952082|ref|XP_003982717.1| PREDICTED: laminin subunit beta-4 [Felis catus]
Length = 1812
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 21/145 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CNG S+RC FD Y +G GG C DCQ +G +C++CR +Y+ S
Sbjct: 397 CRCNGHSDRCHFDMTAYLASGGRSGGVCEDCQHHTEGQHCDRCRPLFYRDPLRAMSDPYA 456
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+L+ + G+C CK V G KCD+C NH+ A G
Sbjct: 457 CIPCECDPDGTLSGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHHGLSAADPLG 516
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQC 125
C+ C CNP GS+ + CD GQC
Sbjct: 517 CQPCNCNPLGSLPLS-ACDVETGQC 540
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNGF+ C D E G C +C G G NCE+C D YY SG + C C
Sbjct: 928 CLCNGFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGDPPSGRS-CRPCP 977
Query: 59 CNPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCEC 106
C + S N +S+ C C G G +C C Y A C+ C C
Sbjct: 978 CPDVPSSNQYFAHSCYQDPWSSDVICNCLQGYAGKQCGECSAGFYGNPRISGAPCRPCAC 1037
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---- 162
N V + +C V G+C ++G + +F A N+ RRC
Sbjct: 1038 NNNIDVTDPESCSRVTGECLRCLHDTQG---PNCQFCKPGHFGSAINQT--CRRCSCHPS 1092
Query: 163 ---RDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNP 217
P G G L C+ + G C C P VTG CDRC +++ GC+ C C+P
Sbjct: 1093 GVTPAACPPGQGACL---CDPNTGACPCLPNVTGQTCDRCADRYWNLVPGRGCQPCNCDP 1149
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
S ++ +CD + GQC CK +G C
Sbjct: 1150 RTS--HSGHCDQLTGQCPCKLGYDGQHC 1175
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 87/201 (43%), Gaps = 46/201 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----------NSEG 73
G CL C D GPNC+ C+ ++ + + C C+C+P G C + G
Sbjct: 1054 GECLRCLHDTQGPNCQFCKPGHFGSAINQTCRRCSCHPSGVTPAACPPGQGACLCDPNTG 1113
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+ C C+P S ++ +CD + GQC +L
Sbjct: 1114 ACPCLPNVTGQTCDRCADRYWNLVPGRGCQPCNCDPRTS--HSGHCDQLTGQC-PCKLGY 1170
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE----------- 181
G+ +E CK + Y G L CN+E
Sbjct: 1171 DGQHCSE---------------------CKENYYGDPLGRCLPCDCNTEGTQKPVCDQNT 1209
Query: 182 GRCQCKPGVTGDKCDRCDVNH 202
G C+C+ GV+G +CDRC H
Sbjct: 1210 GMCRCREGVSGPRCDRCARGH 1230
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 93/248 (37%), Gaps = 80/248 (32%)
Query: 24 GHCLDCQGDRDGPNCEKCR----DNYYQKSG---DNFCTACNCN---------PIGSLNL 67
G C+ CQ DGPNCE+C+ D ++ + D+ C AC CN L
Sbjct: 358 GQCV-CQHHTDGPNCERCKGFFQDVPWRPAAGLQDSACRACRCNGHSDRCHFDMTAYLAS 416
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDS 120
S G C+ C+ G CDRC Y D A C CEC+P G++
Sbjct: 417 GGRSGGVCEDCQHHTEGQHCDRCRPLFYRDPLRAMSDPYACIPCECDPDGTLSG------ 470
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
G C S + DPA +
Sbjct: 471 --GICVS-------------------HSDPALGSV------------------------- 484
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G+C CK V G KCD+C NH+ A GC+ C CNP GS+ + CD GQC C+
Sbjct: 485 AGQCLCKENVEGAKCDQCKPNHHGLSAADPLGCQPCNCNPLGSLPLS-ACDVETGQCACQ 543
Query: 238 DNVEGAQC 245
G C
Sbjct: 544 SFATGPHC 551
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N AC C+P GS+ C+ G +CQCKP V G CDRC Y G GC C C+P
Sbjct: 828 NNGAVACKCHPQGSVGPNCSRLGGQCQCKPHVAGRCCDRCSTGSYGLGHHGCHPCHCHPQ 887
Query: 110 GSVKNTPNCDSVKGQC 125
GS + CD + GQC
Sbjct: 888 GS--KSAVCDQITGQC 901
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKP V G CDRC Y G GC C C+P GS + CD + GQC C+ V
Sbjct: 851 GQCQCKPHVAGRCCDRCSTGSYGLGHHGCHPCHCHPQGS--KSAVCDQITGQCACQGEVA 908
Query: 242 GAQC 245
G +C
Sbjct: 909 GLRC 912
>gi|410908449|ref|XP_003967703.1| PREDICTED: netrin-4-like [Takifugu rubripes]
Length = 641
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 80/155 (51%), Gaps = 23/155 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CNG + C F + L+ TG GG C DC+ + +G +C+ CR +++ K+ +
Sbjct: 327 CKCNGLARSCHFSRGLWLATGRRSGGVCDDCRHNTEGRHCQNCRKGFFRDPGLPKTSPDS 386
Query: 54 CTACNCNPIGSL----NLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
C C+C+P+GS + C+ S G C CKPGV G +CD C + ++ E GC+ C+C
Sbjct: 387 CKPCSCHPLGSALSGGSPLCDPSSGECTCKPGVGGARCDSCMLGYWGLHEYGCRPCDC-- 444
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRV---HTEL 140
T +CD G C S ++ R HT L
Sbjct: 445 ------TGDCDPYTGDCISGSVADVSRAAAGHTRL 473
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CD C + ++ E GC+ C+C T +CD G C
Sbjct: 409 SSGECTCKPGVGGARCDSCMLGYWGLHEYGCRPCDC--------TGDCDPYTGDC 455
>gi|23831284|sp|Q61789.3|LAMA3_MOUSE RecName: Full=Laminin subunit alpha-3; AltName: Full=Epiligrin
subunit alpha; AltName: Full=Kalinin subunit alpha;
AltName: Full=Laminin-5 subunit alpha; AltName:
Full=Laminin-6 subunit alpha; AltName: Full=Laminin-7
subunit alpha; AltName: Full=Nicein subunit alpha;
Flags: Precursor
Length = 3333
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 110/239 (46%), Gaps = 46/239 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR Y C AC C+ IGS + C+ G+C C PG+T
Sbjct: 504 GRCL-CRPGVEGPQCDSCRSGSYSFP---ICQACQCSTIGSYPVPCDPGNGQCDCLPGIT 559
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG--QCESAQLSSRGRVHTEL 140
G +CDRC YDF C+PAG++ DS G QC+ S V L
Sbjct: 560 GRQCDRCLSGAYDFPYCQGSGSVCHPAGTL------DSSLGYCQCKQHVASPTCSVCKPL 613
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLG-------HGGSLNL--QCNSE-GRCQCKPGV 190
W+L + P G G+L+ +C E G C CK V
Sbjct: 614 --------------YWNLAKEN----PRGCSECQCHEAGTLSGIGECGQEDGDCSCKAHV 655
Query: 191 TGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
TGD CD C+ + ++ GC+ C+C+ G++ T C G C+C+++VEG QC+
Sbjct: 656 TGDACDTCEDGFFSLEKSNYFGCQGCQCDIGGAL--TTMCSGPSGVCQCREHVEGKQCQ 712
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 110/265 (41%), Gaps = 74/265 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D ++ ++ GG C++CQ + G NCEKC Y++ G
Sbjct: 353 CNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYFRPHGV 412
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S G C CKP +GD C+ C +Y+F
Sbjct: 413 PVDALHGCIPCSCDPERADDCDQGS-GHCHCKPNFSGDYCETCADGYYNF---------- 461
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP------AGNRIWDLRR 160
P C LR+ N+ P AGN ++
Sbjct: 462 ---------PFC---------------------LRIPVFPNYTPSPEDPVAGN----IKG 487
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
C + G L C+ GRC C+PGV G +CD C Y F C++C+C+ GS
Sbjct: 488 CDCNL-----EGVLPEICDDRGRCLCRPGVEGPQCDSCRSGSYSF--PICQACQCSTIGS 540
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD GQC+C + G QC
Sbjct: 541 YPVP--CDPGNGQCDCLPGITGRQC 563
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C+ +Y + C C C
Sbjct: 1687 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCERCQAGHYGNAIHGSCRVCPCP 1737
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C +G RC CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1738 HTNSFATGCAVDGGAVRCACKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLG 1796
Query: 114 NTPNCDSVKGQC 125
CD + G C
Sbjct: 1797 ---PCDPLTGDC 1805
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 79/213 (37%), Gaps = 69/213 (32%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
G + R YY G +C CNC L G+C C P +C+ C++N +
Sbjct: 1291 GASAAAVRQGYY---GFPYCKPCNCG----RRLCEEVTGKCLCPPHTVRPQCEVCEMNSF 1343
Query: 95 DFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
+F AGC C C S KG E+A
Sbjct: 1344 NFHPVAGCDVCNC-------------SRKGTIEAA------------------------- 1365
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
+ C RD+ G+C+CKP VTG +CD+C C C
Sbjct: 1366 ----VSECDRDS----------------GQCRCKPRVTGQQCDKCAPGLLPV-PLKCVPC 1404
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CN G+ + CD G C CK+NVEG QC+
Sbjct: 1405 SCNRDGTEPSV--CDPETGACMCKENVEGPQCQ 1435
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G C+ C D ++ N+ C C C+ G+L C+ G CQC+ V G +
Sbjct: 651 CKAHVTGDACDTCEDGFFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGVCQCREHVEGKQ 710
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 711 CQRPENNYY 719
>gi|47218347|emb|CAG04179.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1085
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNF 53
C C + C FD +Y TG+ GG C DC+ + G CE C Y+Q N
Sbjct: 337 CECKQHATTCHFDMAVYMTTGNVSGGVCDDCKHNTMGRQCELCAPFYFQHPNRDPRDPNV 396
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--GC 101
C CNC+P GSL + G+C+CK V G++CD C ++ G GC
Sbjct: 397 CEPCNCDPDGSLQGGLCDAHTDVVAGLISGQCRCKANVEGERCDNCRQGYFGMGRGPDGC 456
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
C CNP G++ CDS G C +L VH Q N + R C
Sbjct: 457 LPCACNPLGTLPRGSPCDSHTGSCFCKRL-----VHGNACDQCVPEHWGLSNDMDGCRPC 511
Query: 162 KRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
D HGG+LN C+ G+C C+ + G +CD+ + Y
Sbjct: 512 DCD-----HGGALNNNCDPHSGQCVCREHMLGRRCDQMEPGFY 549
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 14 KELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG 73
K + RTG GG G P + + D+ AC C+P GSL+ C + G
Sbjct: 815 KAPWVRTGAGG------GGNPSPPRQAQTLSLLSSPTDS--PACQCDPQGSLSALCEASG 866
Query: 74 -RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+CQC+P V G CD C Y FG +GC++CEC+P GS T C GQC
Sbjct: 867 GQCQCRPNVVGRNCDTCAPATYRFGPSGCRACECDPRGSA--TSFCHQETGQC 917
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C + G +CQC+P V G CD C Y FG +GC++CEC+P GS T C
Sbjct: 856 GSLSALCEASGGQCQCRPNVVGRNCDTCAPATYRFGPSGCRACECDPRGSA--TSFCHQE 913
Query: 231 KGQCECKDNVEGAQC 245
GQC C G QC
Sbjct: 914 TGQCTCLPGATGRQC 928
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
GG C C+ + G NC+ C Y + G + C AC C+P GS C+ E G+C C PG
Sbjct: 866 GGQC-QCRPNVVGRNCDTCAPATY-RFGPSGCRACECDPRGSATSFCHQETGQCTCLPGA 923
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
TG +C C H+ F + C+ C CN ++ +C GQC+
Sbjct: 924 TGRQCSHCLPGHWGFPQ--CRPCHCN-----GHSDSCHPQTGQCQ 961
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C+CK V G++CD C ++ G GC C CNP G++ CDS G C CK
Sbjct: 426 GQCRCKANVEGERCDNCRQGYFGMGRGPDGCLPCACNPLGTLPRGSPCDSHTGSCFCKRL 485
Query: 240 VEGAQC 245
V G C
Sbjct: 486 VHGNAC 491
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 101/257 (39%), Gaps = 57/257 (22%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGD----------------NFCTACNCNPIGSLNLQCNSE 72
C+ + DG NCE+C+D Y T C+ + + S
Sbjct: 302 CKHNTDGVNCERCQDFYNDLPWKPAVGRHTHTCRKCECKQHATTCHFDMAVYMTTGNVSG 361
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C CK G +C+ C ++ C+ C C+P GS++ G C
Sbjct: 362 GVCDDCKHNTMGRQCELCAPFYFQHPNRDPRDPNVCEPCNCDPDGSLQG--------GLC 413
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG--GSLNLQCNS--- 180
++ G + + R ++ + N C++ + +G G G L CN
Sbjct: 414 DAHTDVVAGLISGQCRCKANVEGERCDN-------CRQGYFGMGRGPDGCLPCACNPLGT 466
Query: 181 ----------EGRCQCKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCD 228
G C CK V G+ CD+C H+ GC+ C+C+ G++ N NCD
Sbjct: 467 LPRGSPCDSHTGSCFCKRLVHGNACDQCVPEHWGLSNDMDGCRPCDCDHGGALNN--NCD 524
Query: 229 SVKGQCECKDNVEGAQC 245
GQC C++++ G +C
Sbjct: 525 PHSGQCVCREHMLGRRC 541
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
+C+C+P GS+ C++ GQC+ + + GR + + + F P+G R C+
Sbjct: 849 ACQCDPQGSLSAL--CEASGGQCQ-CRPNVVGR-NCDTCAPATYRFGPSG-----CRACE 899
Query: 163 RDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
D P G S C+ E G+C C PG TG +C C H+ F + C+ C CN
Sbjct: 900 CD--PRGSATSF---CHQETGQCTCLPGATGRQCSHCLPGHWGFPQ--CRPCHCN----- 947
Query: 222 KNTPNCDSVKGQCE-CKDNVEGAQC 245
++ +C GQC+ C+D G C
Sbjct: 948 GHSDSCHPQTGQCQGCRDFTTGHHC 972
>gi|307199233|gb|EFN79905.1| Laminin subunit alpha [Harpegnathos saltator]
Length = 3663
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 22/225 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + C++C YY+ C C+C+ GS+ + C+ EG CQC+ G +C++
Sbjct: 602 CLANFASRTCDQCSPGYYKYPE---CIPCSCDSHGSIGVSCDGEGMCQCRENFDGIRCEQ 658
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV-KGQCESAQLSSRGRV--HTELRVQSR 145
C +Y+F C+ C C+PAG V C S+ G+ + GR+ + +
Sbjct: 659 CKEGYYNF--PTCEGCNCDPAGIVATFQGCGSLPPGELCQCKDRVEGRICNQCKPLYWNL 716
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYD 204
+ ++P G +C + + G G + +C+++ G+C CKPGVT +C RC Y+
Sbjct: 717 QPYNPDG-----CEKCHCNIF--GVIGGIG-ECDTKTGQCICKPGVTDRECSRCVDGTYN 768
Query: 205 FGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
E GC C C+ GSV +P CD GQC C+ V G C+
Sbjct: 769 LQERNIFGCSDCACDVGGSV--SPICDKQTGQCPCQPRVTGLTCK 811
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 60/294 (20%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC G S+ C +D E ++ GG C +C+ + +G NC +C+ +Y+
Sbjct: 329 CNCFGHSDECIYDPETDEKHLSLDIHGNYEGGGICQNCRDNTEGINCNRCKPKFYRPRDK 388
Query: 49 --SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ + C +C+C+ S +S GRC+C+ T CD C+ + FG C+ CEC
Sbjct: 389 PLNATDVCQSCDCDYFYSTGNCADSTGRCECRKEFTPPNCDSCNYGY--FGYPNCRPCEC 446
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--------DPAG--NRIW 156
+ G+ + +C++ G C +L+ G + L + NF +P G N +
Sbjct: 447 HLPGT--DGYHCEATDGYC-PCKLNYAGH-YCNLCAEGYYNFPECLPCSCNPLGALNDLC 502
Query: 157 DLR----RCKRDT--------------YPL-------GHGGSLNLQCNSEGRCQCKPGVT 191
D+ CK + YP G ++ +G C CK G
Sbjct: 503 DVVSGNCTCKNNYGGRTCDICENGYFNYPFCTYCNCDPRGTEFSICDKQDGVCLCKEGYG 562
Query: 192 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +CD C +YD+ CK C C+ GS +T +CDS G+C C N C
Sbjct: 563 GTRCDICIPGYYDY--PNCKPCNCSVVGS--STVSCDS-SGKCSCLANFASRTC 611
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 89/197 (45%), Gaps = 27/197 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C Y+ GD C +C C+ G + C+S G+C C
Sbjct: 1916 GECLQCLNNTYGEACNLCAPGYF---GDAVQRKDCKSCVCDECGMEH--CDSYSGKCFCM 1970
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G++CDRC +HY F GCK+C+C G + CD GQC+ GR
Sbjct: 1971 ENVIGERCDRCAPDHYGFSNCNGCKACDC---GLASESSQCDDETGQCKCMP-GVTGR-R 2025
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ +Q N+ P G C T G S+ + CN+ G+C C PGV G+KCD
Sbjct: 2026 CDQCIQGYWNYRPDG-----CASCGCHT-----GYSVGVSCNTTTGQCTCLPGVIGEKCD 2075
Query: 197 RCDVNHYDFGEAGCKSC 213
C H GC SC
Sbjct: 2076 HCPYRHVLIPTQGCFSC 2092
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 98/239 (41%), Gaps = 49/239 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ G C+ C YY C CNC+ +GS + C+S G+C C
Sbjct: 553 GVCL-CKEGYGGTRCDICIPGYYDYPN---CKPCNCSVVGSSTVSCDSSGKCSCLANFAS 608
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
CD+C +Y + E C C C+ GS+ + CD +G C Q
Sbjct: 609 RTCDQCSPGYYKYPE--CIPCSCDSHGSIGVS--CDG-EGMC-----------------Q 646
Query: 144 SRKNFDPAGNRIWDLRRCKRDTY-----------PLGHGGSLNLQCNSEG---RCQCKPG 189
R+NFD G R +CK Y P G + C S CQCK
Sbjct: 647 CRENFD--GIR---CEQCKEGYYNFPTCEGCNCDPAGIVATFQ-GCGSLPPGELCQCKDR 700
Query: 190 VTGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C++C +++ + GC+ C CN G + CD+ GQC CK V +C
Sbjct: 701 VEGRICNQCKPLYWNLQPYNPDGCEKCHCNIFGVIGGIGECDTKTGQCICKPGVTDREC 759
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 106/259 (40%), Gaps = 49/259 (18%)
Query: 22 HGGHCL-------------------DCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNC 59
+GG+C+ DC+ G +CE C YY + C C C
Sbjct: 1782 YGGYCVPCQCNGHASTCDVNTGICQDCKNGTIGDHCEFCEQGYYGNATVGTPTDCLICAC 1841
Query: 60 N-PIGSLNL----QCNSEG---RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
P+ S N + N EG C C P G +C+ C +Y E CK CEC+
Sbjct: 1842 PLPVVSNNFAIGCEVNDEGNKISCDCLPEYYGARCEACAAGYYGNPEVYGDYCKPCECSG 1901
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
+CDS+ G+C ++ G + + F A R D + C D +
Sbjct: 1902 NIDTNQIDSCDSITGECLQCLNNTYGEA---CNLCAPGYFGDAVQR-KDCKSCVCDECGM 1957
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPN 226
H C+S G+C C V G++CDRC +HY F GCK+C+C G +
Sbjct: 1958 EH-------CDSYSGKCFCMENVIGERCDRCAPDHYGFSNCNGCKACDC---GLASESSQ 2007
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC+C V G +C
Sbjct: 2008 CDDETGQCKCMPGVTGRRC 2026
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 89/226 (39%), Gaps = 73/226 (32%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
GG C C+ + G CE C+ +Y G C CNC P +L C S+ GRC C
Sbjct: 1377 FGGQC-PCRPNIIGRRCEICKTGFY---GFPRCRPCNC-PTTAL---CESDSGRCICPSH 1428
Query: 81 VTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
VTG +CD+C+V Y F GC+ C C+P G + CD + G C
Sbjct: 1429 VTGARCDQCEVGTYGFHPIIGCEECNCSPDGVLDGDLQCDLLDGNC-------------- 1474
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
RC++ N GR +CDRC
Sbjct: 1475 --------------------RCEK---------------NVVGR----------RCDRCH 1489
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ F C+ C+C+ G+ + CD + +C CK NV+G C
Sbjct: 1490 AGYSHFPR--CERCDCDLRGTTSDI--CDQITAECFCKTNVQGLAC 1531
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
+ G C C + G C++C ++Y S N C AC+C + S + QC+ E G+C+C PG
Sbjct: 1963 YSGKCF-CMENVIGERCDRCAPDHYGFSNCNGCKACDCG-LASESSQCDDETGQCKCMPG 2020
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C ++++ GC SC C+ SV + C++ GQC
Sbjct: 2021 VTGRRCDQCIQGYWNYRPDGCASCGCHTGYSVGVS--CNTTTGQC 2063
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 101/244 (41%), Gaps = 61/244 (25%)
Query: 28 DCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSEGRC--------Q 76
DC + G CE C YY + GD +C C C S N+ N C Q
Sbjct: 1866 DCLPEYYGARCEACAAGYYGNPEVYGD-YCKPCEC----SGNIDTNQIDSCDSITGECLQ 1920
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C G+ C+ C + FG+A CKSC C+ G +CDS G+C +
Sbjct: 1921 CLNNTYGEACNLCAPGY--FGDAVQRKDCKSCVCDECG----MEHCDSYSGKCFCME--- 1971
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH----------GGSLNLQCNSE- 181
+ G R RC D Y + S + QC+ E
Sbjct: 1972 ----------------NVIGER---CDRCAPDHYGFSNCNGCKACDCGLASESSQCDDET 2012
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C PGVTG +CD+C ++++ GC SC C+ SV + C++ GQC C V
Sbjct: 2013 GQCKCMPGVTGRRCDQCIQGYWNYRPDGCASCGCHTGYSVGVS--CNTTTGQCTCLPGVI 2070
Query: 242 GAQC 245
G +C
Sbjct: 2071 GEKC 2074
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQ-CNSEG---RCQCKPGV 81
C+ + DG CE+C++ YY NF C CNC+P G + Q C S CQCK V
Sbjct: 647 CRENFDGIRCEQCKEGYY-----NFPTCEGCNCDPAGIVATFQGCGSLPPGELCQCKDRV 701
Query: 82 TGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G C++C +++ + GC+ C CN G + CD+ GQC + G
Sbjct: 702 EGRICNQCKPLYWNLQPYNPDGCEKCHCNIFGVIGGIGECDTKTGQC----ICKPGVTDR 757
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
E ++ I+ C D GGS++ C+ + G+C C+P VTG C
Sbjct: 758 ECSRCVDGTYNLQERNIFGCSDCACDV-----GGSVSPICDKQTGQCPCQPRVTGLTCKE 812
Query: 198 CDVNHY 203
HY
Sbjct: 813 PLKAHY 818
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS +L+C G +C C+P + G +C+ C Y F C+ C C T C+S
Sbjct: 1368 GSTSLECEKFGGQCPCRPNIIGRRCEICKTGFYGFPR--CRPCNC------PTTALCESD 1419
Query: 231 KGQCECKDNVEGAQC 245
G+C C +V GA+C
Sbjct: 1420 SGRCICPSHVTGARC 1434
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 77/191 (40%), Gaps = 18/191 (9%)
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF--GEAG--CKSCECNPAGSVKNTPNCDSV 121
+++ +S +CQC P G C+ C +Y G G C C+CN S CD
Sbjct: 1747 SVRASSVEQCQCPPNYQGLSCEECAPGYYRVQSGSYGGYCVPCQCNGHAS-----TCDVN 1801
Query: 122 KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE 181
G C+ + + G H E Q G D C + + ++ + N E
Sbjct: 1802 TGICQDCKNGTIGD-HCEFCEQGYYGNATVGTPT-DCLICACPLPVVSNNFAIGCEVNDE 1859
Query: 182 G---RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC- 234
G C C P G +C+ C +Y E CK CEC+ +CDS+ G+C
Sbjct: 1860 GNKISCDCLPEYYGARCEACAAGYYGNPEVYGDYCKPCECSGNIDTNQIDSCDSITGECL 1919
Query: 235 ECKDNVEGAQC 245
+C +N G C
Sbjct: 1920 QCLNNTYGEAC 1930
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 97/261 (37%), Gaps = 78/261 (29%)
Query: 29 CQGDRDGPNCEKCRDNYYQK------SGDNF-CTACNC---------NPIG-----SLNL 67
CQ + GP C C + QK + F C CNC +P SL++
Sbjct: 294 CQHNTCGPQCATCCKGFEQKKWRQSTASKKFKCEPCNCFGHSDECIYDPETDEKHLSLDI 353
Query: 68 QCNSE--GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNC 118
N E G CQ C+ G C+RC Y + C+SC+C+ +T NC
Sbjct: 354 HGNYEGGGICQNCRDNTEGINCNRCKPKFYRPRDKPLNATDVCQSCDCD---YFYSTGNC 410
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--- 175
G+CE RK F P C Y G+ G N
Sbjct: 411 ADSTGRCE-----------------CRKEFTPPN--------CDSCNY--GYFGYPNCRP 443
Query: 176 ----------LQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
C ++G C CK G C+ C +Y+F E C C CNP G++ +
Sbjct: 444 CECHLPGTDGYHCEATDGYCPCKLNYAGHYCNLCAEGYYNFPE--CLPCSCNPLGALNDL 501
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD V G C CK+N G C
Sbjct: 502 --CDVVSGNCTCKNNYGGRTC 520
>gi|156371020|ref|XP_001628564.1| predicted protein [Nematostella vectensis]
gi|156215544|gb|EDO36501.1| predicted protein [Nematostella vectensis]
Length = 1855
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 93/204 (45%), Gaps = 36/204 (17%)
Query: 56 ACNCNPIGS-LNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
AC C+ +G+ LN C+ G +CQCKPGVTG CD+C Y+F +GC C+C GS
Sbjct: 733 ACGCDSVGTYLNSTCDRYGGKCQCKPGVTGRTCDKCKPGFYNFTSSGCAPCDCVSTGS-- 790
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-- 171
+ C++V GQC + R SR N G Y G G
Sbjct: 791 HHLVCNAVSGQCPC-------KPGVITRTCSRCNDSFYG-------------YTTGSGCV 830
Query: 172 -------GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
GS + QC+ G C CK G KC C Y+F AGC++C C+ GS
Sbjct: 831 ECRCNMSGSADAQCDDVTGNCTCKNSTDGAKCAECRFGFYNFTSAGCQACNCHEGGS--Q 888
Query: 224 TPNCDSVKGQCECKDNVEGAQCRS 247
+ C+ G C CK N G +C S
Sbjct: 889 SQQCNLQTGICTCKSNALGEKCES 912
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 87/185 (47%), Gaps = 19/185 (10%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
+GG C C+ G C+KC+ +Y + C C+C GS +L CN+ G+C CKPG
Sbjct: 750 YGGKC-QCKPGVTGRTCDKCKPGFYNFTSSG-CAPCDCVSTGSHHLVCNAVSGQCPCKPG 807
Query: 81 VTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V C RC+ + Y + +GC C CN +GS CD V G C + + S+ G E
Sbjct: 808 VITRTCSRCNDSFYGYTTGSGCVECRCNMSGSAD--AQCDDVTGNC-TCKNSTDGAKCAE 864
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
R NF AG + + GGS + QCN + G C CK G+KC+ C
Sbjct: 865 CRF-GFYNFTSAGCQACNCH----------EGGSQSQQCNLQTGICTCKSNALGEKCESC 913
Query: 199 DVNHY 203
Y
Sbjct: 914 RPGTY 918
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 27/215 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CT 55
C C+ ++ C + ++ G+G C DC + +G CE+C+D +Y+ + C
Sbjct: 326 CECHSHADSCTYSQQ----EGYGT-CDDCYHNTEGHFCERCKDKFYRNMSLSLNHPEICP 380
Query: 56 ACNCNPIGSLNL-QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAG 110
CNC P G N CN + G+C+C+ VTG +CD C + + C C C G
Sbjct: 381 DCNCFPQGITNNGTCNQTTGQCECRANVTGRQCDSCADTFWGYTLEPIGYCTECLCVGNG 440
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF-DPAGNRIWDLRRCKRDTYPLG 169
+V + NCD GQC S + VHT + + + D D +RC D
Sbjct: 441 TVNASFNCDQYNGQC-----SCKPNVHTRTCQECKHGYWDFPKTLDTDCKRCDCD----- 490
Query: 170 HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
+GGS+ C+ + G C C+ + G +C ++
Sbjct: 491 YGGSVLQICSKTTGSCMCRTNIIGTRCTDVTTGYF 525
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 102/281 (36%), Gaps = 68/281 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--------DN 52
C C+G + C F E G +C DC + G +CE+C + K+ N
Sbjct: 269 CKCHGHARWCDFPHET------GKNC-DCLHNTTGDDCERCLPLFNNKTWMPATSETEPN 321
Query: 53 FCTACNCNPIGSLNLQCNSEGRCQC---KPGVTGDKCDRC----------DVNHYDFGEA 99
C C C+ EG C G C+RC +NH +
Sbjct: 322 PCERCECHSHADSCTYSQQEGYGTCDDCYHNTEGHFCERCKDKFYRNMSLSLNHPEI--- 378
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
C C C P G + N C+ GQCE A ++ R D + W
Sbjct: 379 -CPDCNCFPQG-ITNNGTCNQTTGQCECRANVTGR-------------QCDSCADTFWGY 423
Query: 159 RRCKRDTYPLGH--------GGSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDFG- 206
P+G+ G++N N G+C CKP V C C ++DF
Sbjct: 424 -----TLEPIGYCTECLCVGNGTVNASFNCDQYNGQCSCKPNVHTRTCQECKHGYWDFPK 478
Query: 207 --EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CK C+C+ GSV C G C C+ N+ G +C
Sbjct: 479 TLDTDCKRCDCDYGGSVLQI--CSKTTGSCMCRTNIIGTRC 517
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+ G+C+C+ VTG +CD C + + C C C G+V + NCD GQC C
Sbjct: 398 TTGQCECRANVTGRQCDSCADTFWGYTLEPIGYCTECLCVGNGTVNASFNCDQYNGQCSC 457
Query: 237 KDNVEGAQCR 246
K NV C+
Sbjct: 458 KPNVHTRTCQ 467
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 22 HGGHCLDCQ-GDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSL---NLQCN-SEGRC 75
G +C CQ G + +C +C Y+ K G N C C+C +L + CN + G+C
Sbjct: 1180 QGLYCEQCQPGVDNTTDCTQCLPEYWGLKEGSNGCQDCDCVLPNTLYGNSTVCNATTGQC 1239
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
CK ++G CDRC N Y+ + GC C
Sbjct: 1240 TCKEKISGRTCDRCHENAYNTSDRGCVEC 1268
>gi|410918673|ref|XP_003972809.1| PREDICTED: laminin subunit beta-1-like [Takifugu rubripes]
Length = 1773
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 99/223 (44%), Gaps = 30/223 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNF 53
C CN + C FD +Y TG+ GG C DC+ + G CE+C YYQ N
Sbjct: 333 CECNQHTTECHFDMAVYMTTGNVSGGVCDDCKHNTVGRQCEQCAPFYYQHPNRDLRDPNV 392
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--GC 101
C CNC+P GSL + G+C+CK V G++CD C ++ G GC
Sbjct: 393 CEPCNCDPSGSLQGGLCDARTDVVAGLLSGQCRCKANVEGERCDNCRQGYFGLGRGPDGC 452
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
C CNP G++ CDS G C +L V Q N + R C
Sbjct: 453 LPCTCNPLGTLPRGNPCDSHTGSCFCKRL-----VEGYACDQCVAEHWGLSNDMDGCRPC 507
Query: 162 KRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
D HGG+LN C+ + G+C C+ + G +CD+ + Y
Sbjct: 508 DCD-----HGGALNNNCDPQSGQCVCREHMFGRRCDQVESGFY 545
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 111/267 (41%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTA 56
C+CNG S+ C G C C+ G +CE+C D Y+ SGD+ C
Sbjct: 854 CHCNGHSDYCH---------PQTGQCQSCRDFTTGHHCERCLDGYHGDPELGSGDH-CRP 903
Query: 57 CNCNPIGSLNLQCNSEG--------RCQCKPGVTGDKCDRCDVNHY--DFGEAG-CKSCE 105
C C P G + + S+ C C PG G +CD+C H+ G C C+
Sbjct: 904 CMC-PDGPQSGRHFSDSCYVLAQRLVCVCSPGYRGPRCDQCAPGHFGNPLVPGGRCVPCQ 962
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRD 164
CN + + +CD+ G C R HTE GN + R+C D
Sbjct: 963 CNDNIDMHDPQSCDAQTGAC------IRCLYHTEGYACQHCKAGYYGNAVTQSCRKCMCD 1016
Query: 165 ---TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAG 219
T P +CN G+C CK V G CDRC + ++ GC+ C C+P
Sbjct: 1017 SVGTLPRACSSPEECECNQHSGQCPCKSNVIGQNCDRCAPDTWNITSGTGCQKCNCDPVH 1076
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQCR 246
S ++ C+ V GQC CK G CR
Sbjct: 1077 SFGSS--CNEVTGQCSCKPGFGGRTCR 1101
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P E C + S AC C+P GSL+ C + G +CQC+P + G CD C
Sbjct: 737 PITEICNSYIFSVSALLHKGAMACQCDPQGSLSALCETSGGQCQCRPNIRGRNCDSCAPA 796
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F +GC++CEC+P GSV + C GQC
Sbjct: 797 TYQFSPSGCRACECDPRGSVSSF--CLETTGQC 827
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 168 LGHGGSLNLQCNSE-----------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
L H G++ QC+ + G+CQC+P + G CD C Y F +GC++CEC+
Sbjct: 752 LLHKGAMACQCDPQGSLSALCETSGGQCQCRPNIRGRNCDSCAPATYQFSPSGCRACECD 811
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P GSV + C GQC C G QC
Sbjct: 812 PRGSVSSF--CLETTGQCTCVPGATGRQC 838
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 102/232 (43%), Gaps = 20/232 (8%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGV 81
GG C C+ + G NC+ C YQ S C AC C+P GS++ C + G+C C PG
Sbjct: 776 GGQC-QCRPNIRGRNCDSCAPATYQFSPSG-CRACECDPRGSVSSFCLETTGQCTCVPGA 833
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
TG +C C H+ F + C+ C CN ++ C GQC+S + + G H E R
Sbjct: 834 TGRQCSHCLPGHWGFPQ--CRPCHCN-----GHSDYCHPQTGQCQSCRDFTTGH-HCE-R 884
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR---CQCKPGVTGDKCDRC 198
+ DP R C P G + C + C C PG G +CD+C
Sbjct: 885 CLDGYHGDPELGSGDHCRPCMCPDGPQS-GRHFSDSCYVLAQRLVCVCSPGYRGPRCDQC 943
Query: 199 DVNHY--DFGEAG-CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
H+ G C C+CN + + +CD+ G C C + EG C+
Sbjct: 944 APGHFGNPLVPGGRCVPCQCNDNIDMHDPQSCDAQTGACIRCLYHTEGYACQ 995
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C+CK V G++CD C ++ G GC C CNP G++ CDS G C CK
Sbjct: 422 GQCRCKANVEGERCDNCRQGYFGLGRGPDGCLPCTCNPLGTLPRGNPCDSHTGSCFCKRL 481
Query: 240 VEGAQC 245
VEG C
Sbjct: 482 VEGYAC 487
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 58/262 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNY----YQKS---GDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + DG NCE+C+D Y ++ + + C C CN + +
Sbjct: 294 GHCV-CKHNTDGVNCERCQDFYNDLPWKPAVGRSTHTCKKCECNQHTTECHFDMAVYMTT 352
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHY-----DFGEAG-CKSCECNPAGSVKNTPNCDS 120
S G C CK G +C++C +Y D + C+ C C+P+GS++
Sbjct: 353 GNVSGGVCDDCKHNTVGRQCEQCAPFYYQHPNRDLRDPNVCEPCNCDPSGSLQG------ 406
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG--GSLNLQC 178
G C++ G + + R ++ + N C++ + LG G G L C
Sbjct: 407 --GLCDARTDVVAGLLSGQCRCKANVEGERCDN-------CRQGYFGLGRGPDGCLPCTC 457
Query: 179 NS-------------EGRCQCKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPAGSVKN 223
N G C CK V G CD+C H+ GC+ C+C+ G++ N
Sbjct: 458 NPLGTLPRGNPCDSHTGSCFCKRLVEGYACDQCVAEHWGLSNDMDGCRPCDCDHGGALNN 517
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
NCD GQC C++++ G +C
Sbjct: 518 --NCDPQSGQCVCREHMFGRRC 537
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 92 NHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
N Y F + G +C+C+P GS+ C++ GQC+ + + RGR + + +
Sbjct: 743 NSYIFSVSALLHKGAMACQCDPQGSLSAL--CETSGGQCQ-CRPNIRGR-NCDSCAPATY 798
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 206
F P+G R C+ D P G S L+ + G+C C PG TG +C C H+ F
Sbjct: 799 QFSPSG-----CRACECD--PRGSVSSFCLE--TTGQCTCVPGATGRQCSHCLPGHWGFP 849
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQC 245
+ C+ C CN ++ C GQC+ C+D G C
Sbjct: 850 Q--CRPCHCN-----GHSDYCHPQTGQCQSCRDFTTGHHC 882
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 14/98 (14%)
Query: 160 RCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE 207
RC DT+ + G S CN G+C CKPG G C C + E
Sbjct: 1053 RCAPDTWNITSGTGCQKCNCDPVHSFGSSCNEVTGQCSCKPGFGGRTCRECRELFWGDPE 1112
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +C+C+P G ++ C GQC C + G +C
Sbjct: 1113 VKCHACDCDPRGI--SSEECHRATGQCTCVEAASGPRC 1148
>gi|226423935|ref|NP_034810.1| laminin subunit alpha-3 precursor [Mus musculus]
Length = 3330
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 110/239 (46%), Gaps = 46/239 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR Y C AC C+ IGS + C+ G+C C PG+T
Sbjct: 504 GRCL-CRPGVEGPQCDSCRSGSYSFP---ICQACQCSTIGSYPVPCDPGNGQCDCLPGIT 559
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG--QCESAQLSSRGRVHTEL 140
G +CDRC YDF C+PAG++ DS G QC+ S V L
Sbjct: 560 GRQCDRCLSGAYDFPYCQGSGSVCHPAGTL------DSSLGYCQCKQHVASPTCSVCKPL 613
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLG-------HGGSLNL--QCNSE-GRCQCKPGV 190
W+L + P G G+L+ +C E G C CK V
Sbjct: 614 --------------YWNLAKEN----PRGCSECQCHEAGTLSGIGECGQEDGDCSCKAHV 655
Query: 191 TGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
TGD CD C+ + ++ GC+ C+C+ G++ T C G C+C+++VEG QC+
Sbjct: 656 TGDACDTCEDGFFSLEKSNYFGCQGCQCDIGGAL--TTMCSGPSGVCQCREHVEGKQCQ 712
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 110/265 (41%), Gaps = 74/265 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D ++ ++ GG C++CQ + G NCEKC Y++ G
Sbjct: 353 CNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYFRPHGV 412
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S G C CKP +GD C+ C +Y+F
Sbjct: 413 PVDALHGCIPCSCDPERADDCDQGS-GHCHCKPNFSGDYCETCADGYYNF---------- 461
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP------AGNRIWDLRR 160
P C LR+ N+ P AGN ++
Sbjct: 462 ---------PFC---------------------LRIPVFPNYTPSPEDPVAGN----IKG 487
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
C + G L C+ GRC C+PGV G +CD C Y F C++C+C+ GS
Sbjct: 488 CDCNL-----EGVLPEICDDRGRCLCRPGVEGPQCDSCRSGSYSF--PICQACQCSTIGS 540
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD GQC+C + G QC
Sbjct: 541 YPVP--CDPGNGQCDCLPGITGRQC 563
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 90/211 (42%), Gaps = 51/211 (24%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P G+ C+ EG +C C+P V G +C RC +Y F CK C C
Sbjct: 1258 NGAIPCECDPAGTAGHHCSPEGGQCPCRPNVIGRQCSRCATGYYGF--PYCKPCNCGRRL 1315
Query: 111 SVKNTPNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-----------GNRI 155
+ T C +V+ QCE +++S NF P G
Sbjct: 1316 CEEVTGKCLCPPHTVRPQCEVCEMNSF-------------NFHPVAGCDVCNCSRKGTIE 1362
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
+ C RD+ G+C+CKP VTG +CD+C Y F E C C C
Sbjct: 1363 AAVSECDRDS----------------GQCRCKPRVTGQQCDKCAPGFYQFPE--CVPCSC 1404
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
N G+ + CD G C CK+NVEG QC+
Sbjct: 1405 NRDGTEPSV--CDPETGACMCKENVEGPQCQ 1433
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C+ +Y + C C C
Sbjct: 1684 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCERCQAGHYGNAIHGSCRVCPCP 1734
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C +G RC CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1735 HTNSFATGCAVDGGAVRCACKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLG 1793
Query: 114 NTPNCDSVKGQC 125
CD + G C
Sbjct: 1794 ---PCDPLTGDC 1802
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----EGRCQCKPGVTGDKCDRCDV 91
P CE C N + C CNC+ G++ + G+C+CKP VTG +CD+C
Sbjct: 1332 PQCEVCEMNSFNFHPVAGCDVCNCSRKGTIEAAVSECDRDSGQCRCKPRVTGQQCDKCAP 1391
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ + CD G C
Sbjct: 1392 GFYQFPE--CVPCSCNRDGTEPSV--CDPETGAC 1421
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G C+ C D ++ N+ C C C+ G+L C+ G CQC+ V G +
Sbjct: 651 CKAHVTGDACDTCEDGFFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGVCQCREHVEGKQ 710
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 711 CQRPENNYY 719
>gi|297259425|ref|XP_002798118.1| PREDICTED: laminin subunit alpha-5-like [Macaca mulatta]
Length = 3350
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 97/234 (41%), Gaps = 45/234 (19%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
CQ GP+C++C Y+ G C C C+P G+L+ C + G C+C+PG TG C
Sbjct: 607 CQPGFAGPHCDQCHPGYH---GFPNCQPCTCDPRGALDQLCGAGGLCRCRPGYTGTACQE 663
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR----VQS 144
C + F C C C+ GS+ CD GQC S R RV T LR V
Sbjct: 664 CSPGFHGF--PSCVPCHCSAEGSLHAA--CDPQSGQC-----SCRPRV-TGLRCDTCVPG 713
Query: 145 RKNFD--------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
NF PAG + D P ++ C C+ V G CD
Sbjct: 714 AYNFPYCEAGSCHPAGLALVD------PALP-----------EAQAPCVCRANVEGPSCD 756
Query: 197 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
RC + + GC C C+P G++ C GQC CK +V G C +
Sbjct: 757 RCKPGFWGLSPSNPEGCTRCSCDPRGTLGGVAECQPGTGQCFCKPHVCGQACAA 810
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 100/259 (38%), Gaps = 60/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G + C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 359 CNCHGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPDH 418
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC + + GRC C+P +G++CD C G G SC
Sbjct: 419 PLDSPHVCCRCNCESNFTDGTCEDLTGRCYCRPNFSGERCDVCAE-----GFTGFPSCYP 473
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P+ S +R+ PAG + C D
Sbjct: 474 TPSSSND------------------------------TREQVLPAGQIV----NC--DCS 497
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G G+ + GRC CKP G C+ C Y GC+ C+C+ G +
Sbjct: 498 AAGTQGNACRKDPRVGRCVCKPNFQGTHCELCVPGFYG---PGCQPCQCSSPGVADD--R 552
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD G C C++ EGA C
Sbjct: 553 CDPDTGWCRCREGFEGATC 571
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C+ V G C RC ++ F C+ C+C
Sbjct: 1435 CGCHEVGATGPTCEPFGGQCPCRAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1485
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P + C+ T+ PL
Sbjct: 1486 RLCDELTGQC----------------ICPPRTVPP------ECLLCQPQTFGCHPLVGCE 1523
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1524 ECNCSGPGVQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPHCRPCDCHEAGT 1581
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1582 APGV--CDPLTGQCYCKENVQGPRC 1604
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ + +GP+C++C+ ++ S N CT C+C+P G+L +C G+C CKP V G
Sbjct: 746 CRANVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDPRGTLGGVAECQPGTGQCFCKPHVCG 805
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 806 QACAACKDGFFGLDQADYFGCRSCRCDAGGALGQS--CEPRTGAC 848
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 81/204 (39%), Gaps = 49/204 (24%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 494 CDCSAAGTQGNACRKDPRVGRCVCKPNFQGTHCELCVPGFYG---PGCQPCQCSSPGVAD 550
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPL 168
+ CD G C + R+ F+ A C R +PL
Sbjct: 551 D--RCDPDTGWC-----------------RCREGFEGA--------TCDRCAPGYFRFPL 583
Query: 169 ------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
G+L C+ GRC C+PG G CD+C ++ F C+ C C+P G++
Sbjct: 584 CQLCGCSPAGTLPEGCDEAGRCPCQPGFAGPHCDQCHPGYHGF--PNCQPCTCDPRGALD 641
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 642 QL--CGA-GGLCRCRPGYTGTACQ 662
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 98/253 (38%), Gaps = 57/253 (22%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ---CNSE-GRCQCKPGVTGDKCDRCDV 91
P C C+ + C CNC+ G L C+++ G+C+C+P VTG +CD C
Sbjct: 1504 PECLLCQPQTFGCHPLVGCEECNCSGPGVQELTDPTCDTDSGQCKCRPNVTGRRCDTCSP 1563
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC---ESAQ-------------LSSRGR 135
+ G C+ C+C+ AG+ CD + GQC E+ Q L +
Sbjct: 1564 GFH--GYPHCRPCDCHEAGTAPGV--CDPLTGQCYCKENVQGPRCDQCSLGTFSLDAGNF 1619
Query: 136 VHTELR-----------------VQSRKNFDPAGNRIWDLRRCKRDTY-PLGHGGSLNLQ 177
HTE R +Q R F + + LRR + P G G L
Sbjct: 1620 RHTETRNTVSREELMMVLASLEQLQIRALFSQISSAV-SLRRVALEVASPAGQG---TLA 1675
Query: 178 CNSEGRCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
N E C C GD C C Y C C+C+ ++ C G
Sbjct: 1676 SNVE-LCLCPASYRGDSCQECAPGFYRDIKGLFLGRCVPCQCH-----GHSDRCLPGSGI 1729
Query: 234 C-ECKDNVEGAQC 245
C +C+ N EGAQC
Sbjct: 1730 CVDCQHNTEGAQC 1742
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 21/137 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+DCQ + +G CE+C+ + D C +C
Sbjct: 1714 CQCHGHSDRCL---------PGSGICVDCQHNTEGAQCERCQAGFVSSREDPSAPCVSCP 1764
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1765 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1824
Query: 110 GSVKNT-PNCDSVKGQC 125
G +CD + G C
Sbjct: 1825 GDPNLLFSDCDPLTGAC 1841
>gi|383862551|ref|XP_003706747.1| PREDICTED: laminin subunit beta-1-like, partial [Megachile
rotundata]
Length = 753
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 109/264 (41%), Gaps = 78/264 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN S C FD +Y ++G GG C +CQ + +G NCE C+ YY +
Sbjct: 321 CNCNNHSTSCHFDDLVYEQSGRVSGGVCNNCQHNTEGRNCELCKLFYYHDVTKDISHPEA 380
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C+C+ GSL+ L GRC+CK V G +CDRC +++F A
Sbjct: 381 CLPCDCDLNGSLDDGICDSRTDPLSGGESGRCRCKANVEGRRCDRCKNGYWNFDPA---- 436
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
NP G C++ ++ G + D R C
Sbjct: 437 ---NPEG--------------CQACTCNTLGTI--------------------DNRGCNM 459
Query: 164 DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSV 221
T G C CK VT C++C ++ E GCK C+C+P GS
Sbjct: 460 VT----------------GECTCKRYVTARDCNQCLPEYWGLSEDPDGCKPCDCDPGGSY 503
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+N+ CD GQC C+ ++ G C
Sbjct: 504 ENS--CDVRTGQCRCRPHISGRTC 525
>gi|301755689|ref|XP_002913698.1| PREDICTED: laminin subunit beta-4-like [Ailuropoda melanoleuca]
Length = 1673
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CN S+RC FD Y R+G GG C DC+ + +G +C++CR +Y+ S
Sbjct: 332 CHCNSHSDRCHFDMRAYVRSGGRSGGVCEDCRHNTEGQHCDRCRPLFYRDPLKAMSDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+L+ G+C CK V G KCD+C NH+ A G
Sbjct: 392 CIPCECDPDGTLSGGMCVSHSDPALGTVAGQCLCKENVEGTKCDQCKPNHHGLSAADPVG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQC 125
C+ C CNP GS+ + CD GQC
Sbjct: 452 CQPCNCNPFGSLPLS-TCDVDTGQC 475
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 114/267 (42%), Gaps = 41/267 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNGF+ C D E G C +C G G NCE+C D YY SG + C C
Sbjct: 863 CLCNGFAELC--DPET-------GSCFNCGGFTTGRNCERCIDGYYGNPPSGRS-CRPCP 912
Query: 59 CNPIGS---------LNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCEC 106
C + S +S+ C C G G +C C V Y A C+ C C
Sbjct: 913 CPDVPSSSRYFAHSCYQHPWSSDVICNCLQGYAGKQCGECSVGFYGNPKVSGAPCQPCAC 972
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
N V + +C + G+C ++ G + +F A N+ RRC +
Sbjct: 973 NNNTDVTDPASCSRLTGECLKCLHNTWG---PHCQFCKPGHFGSAVNQT--CRRC--SCH 1025
Query: 167 PLG------HGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPA 218
P G G C+ + G C C P VTG CDRC +++ + GC+ C+C+P
Sbjct: 1026 PSGVNPAECPPGQEACLCDPDNGTCPCLPNVTGQACDRCADGYWNLVPSKGCQPCDCDPR 1085
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
S ++ +CD + GQC CK +G C
Sbjct: 1086 TS--HSSHCDQLTGQCPCKLGYDGKHC 1110
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 106/276 (38%), Gaps = 85/276 (30%)
Query: 1 CNCNGFSNRCFFDKEL----YNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG + C +E+ ++ G G C+ CQ D DGPNCE+CRD ++
Sbjct: 265 CFCNGHARECGPAREVRGDVFSPPGMVHGRCV-CQHDTDGPNCERCRDFFHDAPWRPGAG 323
Query: 51 --DNFCTACNCNPIGS-----LNLQCNSEGRC-----QCKPGVTGDKCDRCDVNHY-DFG 97
D+ C AC+CN + S GR C+ G CDRC Y D
Sbjct: 324 REDSTCRACHCNSHSDRCHFDMRAYVRSGGRSGGVCEDCRHNTEGQHCDRCRPLFYRDPL 383
Query: 98 EA-----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
+A C CEC+P G++ G C S + DPA
Sbjct: 384 KAMSDPYACIPCECDPDGTLSG--------GMCVS-------------------HSDPAL 416
Query: 153 NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 209
+ G+C CK V G KCD+C NH+ A G
Sbjct: 417 GTV-------------------------AGQCLCKENVEGTKCDQCKPNHHGLSAADPVG 451
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C CNP GS+ + CD GQC C+ G C
Sbjct: 452 CQPCNCNPFGSLPLS-TCDVDTGQCLCQPFATGPHC 486
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 46/201 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + GP+C+ C+ ++ + + C C+C+P G +C G
Sbjct: 989 GECLKCLHNTWGPHCQFCKPGHFGSAVNQTCRRCSCHPSGVNPAECPPGQEACLCDPDNG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ + GC+ C+C+P S ++ +CD + GQC +L
Sbjct: 1049 TCPCLPNVTGQACDRCADGYWNLVPSKGCQPCDCDPRTS--HSSHCDQLTGQC-PCKLGY 1105
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PLG--------HGGSLNLQCNSE- 181
G+ CK + Y PLG G+ C+ +
Sbjct: 1106 DGK---------------------HCSGCKENHYSDPLGRCIPCDCNREGAQKPTCDQDT 1144
Query: 182 GRCQCKPGVTGDKCDRCDVNH 202
G C+C+ GV+G +CDRC H
Sbjct: 1145 GMCRCREGVSGPQCDRCARGH 1165
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G C C NHY C C+CN G+ K P CD G C C++ V
Sbjct: 1097 GQCPCKLGYDGKHCSGCKENHYSDPLGRCIPCDCNREGAQK--PTCDQDTGMCRCREGVS 1154
Query: 242 GAQC 245
G QC
Sbjct: 1155 GPQC 1158
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N AC C+P GS+ C+ G +CQCK VTG CD+C Y G GC C C+P G
Sbjct: 764 NGAVACKCHPQGSVGPSCSRLGGQCQCKLHVTGRCCDKCSPGSYGLGHHGCHRCHCHPQG 823
Query: 111 SVKNTPNCDSVKGQC 125
S +P CD + GQC
Sbjct: 824 S--KSPVCDQITGQC 836
>gi|402864549|ref|XP_003896522.1| PREDICTED: laminin subunit beta-4 isoform 1 [Papio anubis]
Length = 1762
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD +Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CN GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNSLGSLPLL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 536
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 111/264 (42%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CPCNGFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCPCN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCFHNTQG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 1028
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
P+ GG L G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1029 VSPVECPPGGGACLCDPVTGACPCLPSVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS- 1087
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD + GQC CK G +C
Sbjct: 1088 -QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 90/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G ++C G
Sbjct: 989 GECLRCFHNTQGANCQLCKPGHYGSALNQTCRRCSCHASGVSPVECPPGGGACLCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPSVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -RCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCRCREGVSGQRC 1158
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 105/277 (37%), Gaps = 87/277 (31%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C ++++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECHPMQKVRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS-----LNLQCNSEGRC-----QCKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S + + S G C+ G CDRC Y
Sbjct: 323 DLQDNACRSCSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S + DPA
Sbjct: 383 LKTISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 415
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY
Sbjct: 416 LGSV-------------------------AGQCLCKENVEGAKCDQCKPNHYGLSATDPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C+CN GS+ CD GQC C V GA C
Sbjct: 451 GCQPCDCNSLGSLPLL-TCDVDTGQCLCLSYVTGAHC 486
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 23 GGHCL--------DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EG 73
GG CL C G C++C D Y+ C +C+C+P S + C+ G
Sbjct: 1038 GGACLCDPVTGACPCLPSVTGLACDRCADGYWNLVPGRGCQSCDCDPRTSQSSHCDQLTG 1097
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+C CK G G +C C N+Y C C+CN AG+ K P CD G C
Sbjct: 1098 QCPCKLGYGGKRCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMC 1147
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 74/191 (38%), Gaps = 37/191 (19%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C V+G +CDRC + FG C+SC CN + CD G C + +
Sbjct: 834 GQCPCHGEVSGRRCDRCLAGY--FGFPSCRSCPCNGFAEL-----CDPETGSCFNCGGFT 886
Query: 133 RGR-----VHTELRVQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GR + S DP+ N+ + H NL +
Sbjct: 887 TGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQYF------------AHSCYQNLW-S 933
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-E 235
S+ C C G TG +C C Y A C+ C CN V + +C V G+C
Sbjct: 934 SDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCPCNNNIDVTDPESCSRVTGECLR 993
Query: 236 CKDNVEGAQCR 246
C N +GA C+
Sbjct: 994 CFHNTQGANCQ 1004
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCK V G CDRC Y
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKSLVVGRCCDRCSPGSYGL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCHCHPQGSKDTV--CDLVTGQC 836
>gi|449677846|ref|XP_002170373.2| PREDICTED: laminin subunit alpha-like, partial [Hydra
magnipapillata]
Length = 3342
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 123/269 (45%), Gaps = 49/269 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRT---------GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+ + C +++++ R GG C +CQ + DG NCEKC+ +Y+ SG
Sbjct: 128 CNCHEHTEECEYNEDIEQRKLSLDINGVYSGGGVCKNCQHNTDGINCEKCKPFFYRPSGV 187
Query: 52 -----NFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
N C ACNC+ S L G+C+CKP TG C C+ + + + C CEC
Sbjct: 188 KVTDVNTCQACNCDTQFSTGLCAEGTGQCECKPQYTGRFCKECNNGFHSYPK--CIPCEC 245
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
N G S+ GQC ++ E Q ++ F G + D +
Sbjct: 246 NVKG---------SLDGQCA---------LNPETGCQCKRGF---GGKFCDEYLPGYFGF 284
Query: 167 P-------LGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
P + G+++ CN + G+C+CK G +G C++CD Y F CK C C+ A
Sbjct: 285 PSCQPCNCITRFGAVDGNCNRTSGQCKCKFGFSGRSCEKCDSGFYLF--PYCKECGCDVA 342
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
++ C G+C+CK +G +C +
Sbjct: 343 KTLDTV--CAPGNGKCDCKPGYDGEKCET 369
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 116/275 (42%), Gaps = 75/275 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+C G S++C G C DC G+ G +C++C+ +Y K C C C
Sbjct: 1578 CDCMGRSDKC---------DAETGVCQDCVGNFFGNHCQECKPGFYGKD----CAPCPCP 1624
Query: 61 PIG-----------SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCEC 106
+ SLN SE C+CK G G KC+ C +Y + E G CK C C
Sbjct: 1625 SVHLTGNFADSCAISLN---TSELICKCKQGYVGAKCESCADGYYGNPTEPGGSCKLCSC 1681
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ ++ + NCD V G C+ ++ G H E +CK
Sbjct: 1682 SGNVNLNLSGNCDPVTGTCKKCLNNTDGD-HCE--------------------KCKS--- 1717
Query: 167 PLGHGGSLNL----QCNSE-----------GRCQCKPGVTGDKCDRCDVNHYDFGE-AGC 210
G G L+ CN+ G+CQCK V G +CDRC ++F GC
Sbjct: 1718 --GFYGKLDNCKDCVCNTCGSSGISCSSTTGQCQCKTNVEGKQCDRCKPQTWNFNSCQGC 1775
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C C A K+ CD++ G+C+C VEG +C
Sbjct: 1776 QDCNCGLASESKD---CDALTGECKCLPTVEGKKC 1807
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 97/229 (42%), Gaps = 30/229 (13%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
DC+ DG CE C +Y G C C C+ GS C+ + G C C+P G KC
Sbjct: 357 DCKPGYDGEKCETCAPMFY---GHPACFNCECSVAGSQTPVCDIDSGECACRPNFAGLKC 413
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSR-----GRVHTEL 140
DRC Y G C C C+ G+ + C+ V G C +SR R
Sbjct: 414 DRCAPGFY--GYPSCAPCNCSIEGA--RSTVCNEVTGDCNCKTTYTSRQCNKCTRGFYGF 469
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
+ N +PAG T G S + N++G+C CK V G +C C
Sbjct: 470 PFCKQCNCNPAG------------TDSGQEGWSGDCSTNNDGQCVCKKNVQGLECSECKA 517
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
++ E+ GC+SC C G+ +C S G C CK V+G +C+
Sbjct: 518 GFFNLQESDDLGCESCGCFQPGTNNGITSC-SANGNCACKVFVDGNKCK 565
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
GRC C PGV GD CDRC + F GC+ C C+ G++ N C+ V GQC CK N
Sbjct: 1227 GRCSCPPGVEGDNCDRCMKGTFGFDPVIGCQPCSCDSTGAIDNNTTCNVVTGQCNCKKNF 1286
Query: 241 EGAQC 245
+C
Sbjct: 1287 GSRKC 1291
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ + G C +C+ +Y G C C+C+ S++ GRC C PGV
Sbjct: 1187 GGQC-PCKENIIGRTCTRCKMGFY---GFPNCKPCSCSNCDSVS------GRCSCPPGVE 1236
Query: 83 GDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQC 125
GD CDRC + F GC+ C C+ G++ N C+ V GQC
Sbjct: 1237 GDNCDRCMKGTFGFDPVIGCQPCSCDSTGAIDNNTTCNVVTGQC 1280
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 96/231 (41%), Gaps = 54/231 (23%)
Query: 32 DRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDR 88
D + + E C+ + + + N +C CN GS + QC+ G +C CK + G C R
Sbjct: 1144 DINESSSEFCKKAVFTLTSNFNNGALSCECNEQGSKSSQCSELGGQCPCKENIIGRTCTR 1203
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C + Y F CK C C+ NCDSV G+C
Sbjct: 1204 CKMGFYGF--PNCKPCSCS---------NCDSVSGRCSC--------------------- 1231
Query: 149 DPAGNRIWDLRRCKRDTY---PL--------GHGGSL--NLQCNS-EGRCQCKPGVTGDK 194
P G + RC + T+ P+ G++ N CN G+C CK K
Sbjct: 1232 -PPGVEGDNCDRCMKGTFGFDPVIGCQPCSCDSTGAIDNNTTCNVVTGQCNCKKNFGSRK 1290
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+ +++ C+ C+C+ AG CD+V G C C+D+V G +C
Sbjct: 1291 CSECEKGFFNY--PLCQECDCHSAG--LKGEKCDAVTGDCICQDSVVGTRC 1337
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ--------CNSEGRCQCKP 79
+C+ C KC +Y G FC CNCNP G+ + Q N++G+C CK
Sbjct: 449 NCKTTYTSRQCNKCTRGFY---GFPFCKQCNCNPAGTDSGQEGWSGDCSTNNDGQCVCKK 505
Query: 80 GVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR- 135
V G +C C ++ E+ GC+SC C G+ +C S G C +
Sbjct: 506 NVQGLECSECKAGFFNLQESDDLGCESCGCFQPGTNNGITSC-SANGNCACKVFVDGNKC 564
Query: 136 ---VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
+ +++ + F G C D GGSLN C G+C CK + G
Sbjct: 565 KNCLPGYYKLEEKNFFGCEG--------CDCD-----EGGSLNSNC-LNGQCFCKSNIVG 610
Query: 193 DKCDRCDVNHY 203
KCDR N Y
Sbjct: 611 QKCDRPAANFY 621
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + +G C++C+ + + C CNC + S + C++ G C+C P V G KCD
Sbjct: 1750 CKTNVEGKQCDRCKPQTWNFNSCQGCQDCNCG-LASESKDCDALTGECKCLPTVEGKKCD 1808
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
C + ++++ +GC+ C C P G CD + G C+
Sbjct: 1809 WCKLGYFNYSLSGCQKCSC-PNGGF-----CDVITGSCD 1841
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 20 TGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCNSEGRC 75
T + G C+ C+ + G C +C+ ++ Q+S D C +C C G+ N C++ G C
Sbjct: 495 TNNDGQCV-CKKNVQGLECSECKAGFFNLQESDDLGCESCGCFQPGTNNGITSCSANGNC 553
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK V G+KC C +Y E GC+ C+C+ GS+ N + + GQC
Sbjct: 554 ACKVFVDGNKCKNCLPGYYKLEEKNFFGCEGCDCDEGGSL----NSNCLNGQC 602
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 178 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 234
C++ G C CK V G+KC C +Y E GC+ C+C+ GS+ N + + GQC
Sbjct: 547 CSANGNCACKVFVDGNKCKNCLPGYYKLEEKNFFGCEGCDCDEGGSL----NSNCLNGQC 602
Query: 235 ECKDNVEGAQC 245
CK N+ G +C
Sbjct: 603 FCKSNIVGQKC 613
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
G C+C P V G KCD C + ++++ +GC+ C C P G CD + G C+C
Sbjct: 1794 GECKCLPTVEGKKCDWCKLGYFNYSLSGCQKCSC-PNGGF-----CDVITGSCDC 1842
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 87/231 (37%), Gaps = 60/231 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-------DNF 53
C CNGFS+ C + G + DCQ + GP CE+C+ + QK D
Sbjct: 71 CMCNGFSDECRPTDVI------GQYKCDCQYNSYGPRCEECKPGFVQKKWRTRRDKDDFV 124
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C CNC+ C+ + K D+N G CK+C+ N G
Sbjct: 125 CEKCNCH---------EHTEECEYNEDIEQRKLS-LDINGVYSGGGVCKNCQHNTDGI-- 172
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR---DTYPLGH 170
NC+ K + P+G ++ D+ C+ DT
Sbjct: 173 ---NCEKCKPFF----------------------YRPSGVKVTDVNTCQACNCDT----- 202
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
S L G+C+CKP TG C C+ + + + C CECN GS+
Sbjct: 203 QFSTGLCAEGTGQCECKPQYTGRFCKECNNGFHSYPK--CIPCECNVKGSL 251
>gi|219842259|ref|NP_009054.5| usherin isoform A [Homo sapiens]
Length = 1546
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + N+Y + ++F C CNC+ G++N L CN S G+C CK
Sbjct: 813 GQCI-CKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCNKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 34/233 (14%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ + G C+ C + + D C C CN GS+N CN G+C+CK G +
Sbjct: 717 CKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y CK+C+C+ AGS+ T C++ GQC + V+ R
Sbjct: 777 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQCIC-----------KPNVEGR 824
Query: 146 K-------NFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKC 195
+ NF N + C D G++N L CN S G+C CK GVTG +C
Sbjct: 825 QCNKCLEGNFYLRQNNSFLCLPCNCD-----KTGTINGSLLCNKSTGQCPCKLGVTGLRC 879
Query: 196 DRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C+ + Y+ C+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 880 NQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 931
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ G+V + C+S+ GQC S G+ + +
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHI--CNSLTGQCVCQDASIAGQRCDQCK- 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK V+G +C++C Y+ E GC C CN +G+V C GQC+CK
Sbjct: 660 GQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQNSGQCKCKA 719
Query: 239 NVEGAQC 245
NV G +C
Sbjct: 720 NVIGLRC 726
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++C+D+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCVCQDASIAGQRCDQCKDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1026 FVTGSKCDACVPSASHLD 1043
>gi|345548553|gb|AEO12553.1| Lefftyrin, partial [Oscarella carmela]
Length = 14757
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 70/257 (27%), Positives = 103/257 (40%), Gaps = 55/257 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C C+G S+RC G C DCQ + G NC+ C+ Y + + N
Sbjct: 515 CVCSGHSDRCV----------GVGEC-DCQHNTAGNNCQMCKPLYNDRPWMSGTVNASNE 563
Query: 54 CTACNCNPIGSLNLQCNSEGR---CQCKPGVTGDKCDRCDVNHYDFGEAG------CKSC 104
C C C+ + + GR C G G C+RC H+ C+SC
Sbjct: 564 CVECECHQHADACVYDDGIGRGMCVNCSDGTEGMNCERCRPFHFRPSSRSLEADDVCESC 623
Query: 105 ECNPAGSVKNTPNC------DSVKGQCESAQLSSRGRVHTELRVQSRKNF---DPAGNRI 155
C+ G V + +C D GQC S +L + GR +E V N DP+G
Sbjct: 624 NCDMVG-VTDAGDCRRGDLSDGDSGQC-SCKLLATGRTCSEC-VGGYFNLTKDDPSG--- 677
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
+RC D G++ + + G+C CK V G KC C+ ++D GC+
Sbjct: 678 --CQRCDCDV-----AGTVGKAVDCDFVTGQCPCKAHVVGLKCSACETGYFDLTNPNGCQ 730
Query: 212 SC--ECNPAGSVKNTPN 226
C +C+ G P+
Sbjct: 731 PCSQQCSTDGCTGPGPD 747
>gi|119613742|gb|EAW93336.1| hCG23154 [Homo sapiens]
Length = 1546
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + N+Y + ++F C CNC+ G++N L CN S G+C CK
Sbjct: 813 GQCI-CKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCNKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 34/233 (14%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ + G C+ C + + D C C CN GS+N CN G+C+CK G +
Sbjct: 717 CKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y CK+C+C+ AGS+ T C++ GQC + V+ R
Sbjct: 777 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQCIC-----------KPNVEGR 824
Query: 146 K-------NFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKC 195
+ NF N + C D G++N L CN S G+C CK GVTG +C
Sbjct: 825 QCNKCLEGNFYLRQNNSFLCLPCNCD-----KTGTINGSLLCNKSTGQCPCKLGVTGLRC 879
Query: 196 DRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C+ + Y+ C+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 880 NQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 931
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ G+V + C+S+ GQC S G+ + +
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHI--CNSLTGQCVCQDASIAGQRCDQCK- 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK V+G +C++C Y+ E GC C CN +G+V C GQC+CK
Sbjct: 660 GQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQNSGQCKCKA 719
Query: 239 NVEGAQC 245
NV G +C
Sbjct: 720 NVIGLRC 726
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++C+D+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCVCQDASIAGQRCDQCKDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1026 FVTGSKCDACVPSASHLD 1043
>gi|355562976|gb|EHH19538.1| hypothetical protein EGK_02217, partial [Macaca mulatta]
Length = 1274
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 105/259 (40%), Gaps = 57/259 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G + C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 261 CNCHGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPDH 320
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC + + GRC C+P +G++CD C G G SC
Sbjct: 321 PLDSPHVCCRCNCESNFTDGTCEDLTGRCYCRPNFSGERCDVCAE-----GFTGFPSCYR 375
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ ++ N +R+ PAG + + C
Sbjct: 376 EHLPATPSSSN-------------------------DTREQVLPAGQIV--MCGCSP--- 405
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G+L C+ GRC C+PG G CD+C ++ F C+ C C+ GS+
Sbjct: 406 ----AGTLPEGCDEAGRCPCQPGFAGPHCDQCHPGYHGF--PNCQPCHCSAEGSLHAA-- 457
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC C+ V G +C
Sbjct: 458 CDPRSGQCSCRPRVTGLRC 476
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 85/200 (42%), Gaps = 30/200 (15%)
Query: 55 TACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
C C+P G+L C+ GRC C+PG G CD+C ++ F C+ C C+ GS+
Sbjct: 399 VMCGCSPAGTLPEGCDEAGRCPCQPGFAGPHCDQCHPGYHGF--PNCQPCHCSAEGSLHA 456
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELR----VQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
CD GQC S R RV T LR V NF W D+ G
Sbjct: 457 A--CDPRSGQC-----SCRPRV-TGLRCDTCVPGAYNFPYCEG--WSSAPTAGDSCEWG- 505
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNC 227
GGS C C+ V G CDRC + + GC C C+P G++ C
Sbjct: 506 GGS----------CVCRANVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDPRGTLGGVAEC 555
Query: 228 DSVKGQCECKDNVEGAQCRS 247
GQC CK +V G C +
Sbjct: 556 QPGTGQCFCKPHVCGQACAA 575
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C+ V G C RC ++ F C+ C+C
Sbjct: 1094 CGCHEVGATGPTCEPFGGQCPCRAHVIGRDCSRCATGYWGF--PNCRPCDCGAR------ 1145
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DP---------AGNRIWDLRRCKRD 164
CD + GQC + V E + + F P +G + +L D
Sbjct: 1146 -LCDELTGQC----ICPPRTVPPECLLCQPQTFGCHPLVGCEECNCSGPGVQELTDPTCD 1200
Query: 165 TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
T G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1201 T--------------DSGQCKCRPNVTGRRCDTCSPGFH--GYPHCRPCDCHEAGTAPGV 1244
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1245 --CDPLTGQCYCKENVQGPRC 1263
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQC 77
GG C+ C+ + +GP+C++C+ ++ S N CT C+C+P G+L +C G+C C
Sbjct: 506 GGSCV-CRANVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDPRGTLGGVAECQPGTGQCFC 564
Query: 78 KPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
KP V G C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 565 KPHVCGQACAACKDGFFGLDQADYFGCRSCRCDAGGALGQS--CEPRTGAC 613
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 79/225 (35%), Gaps = 63/225 (28%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
CQ GP+C++C Y+ G C C+C+ GSL+ C+ G+C C+P VTG +CD
Sbjct: 421 CQPGFAGPHCDQCHPGYH---GFPNCQPCHCSAEGSLHAACDPRSGQCSCRPRVTGLRCD 477
Query: 88 RCDVNHYDFG-----------------------------------------------EAG 100
C Y+F G
Sbjct: 478 TCVPGAYNFPYCEGWSSAPTAGDSCEWGGGSCVCRANVEGPSCDRCKPGFWGLSPSNPEG 537
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR-IWDLR 159
C C C+P G++ C GQC + V + + F + R
Sbjct: 538 CTRCSCDPRGTLGGVAECQPGTGQC-----FCKPHVCGQACAACKDGFFGLDQADYFGCR 592
Query: 160 RCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C+ D GG+L C G C+C+P G C R +HY
Sbjct: 593 SCRCDA-----GGALGQSCEPRTGACRCRPNTQGPTCSRPVRDHY 632
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ---CNSE-GRCQCKP 79
G C+ C P C C+ + C CNC+ G L C+++ G+C+C+P
Sbjct: 1152 GQCI-CPPRTVPPECLLCQPQTFGCHPLVGCEECNCSGPGVQELTDPTCDTDSGQCKCRP 1210
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD C + G C+ C+C+ AG+ CD + GQC
Sbjct: 1211 NVTGRRCDTCSPGFH--GYPHCRPCDCHEAGTAPGV--CDPLTGQC 1252
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 68/180 (37%), Gaps = 23/180 (12%)
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C ++G PG + C + F G + C C+ G+ P C+ GQC
Sbjct: 1059 HCAAQGY-HISPGSSSLFCRNAAASLSLFYNNGARPCGCHEVGATG--PTCEPFGGQCPC 1115
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCK 187
R H R SR W C+ P G L + G+C C
Sbjct: 1116 -------RAHVIGRDCSR-----CATGYWGFPNCR----PCDCGARLCDELT--GQCICP 1157
Query: 188 PGVTGDKCDRCDVNHYD-FGEAGCKSCECNPAGSVKNT-PNCDSVKGQCECKDNVEGAQC 245
P +C C + GC+ C C+ G + T P CD+ GQC+C+ NV G +C
Sbjct: 1158 PRTVPPECLLCQPQTFGCHPLVGCEECNCSGPGVQELTDPTCDTDSGQCKCRPNVTGRRC 1217
>gi|19584002|gb|AAC23748.2| Usher syndrome type IIa protein [Homo sapiens]
Length = 1546
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + N+Y + ++F C CNC+ G++N L CN S G+C CK
Sbjct: 813 GQCI-CKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCNKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 34/233 (14%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ + G C+ C + + D C C CN GS+N CN G+C+CK G +
Sbjct: 717 CKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y CK+C+C+ AGS+ T C++ GQC + V+ R
Sbjct: 777 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQCIC-----------KPNVEGR 824
Query: 146 K-------NFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKC 195
+ NF N + C D G++N L CN S G+C CK GVTG +C
Sbjct: 825 QCNKCLEGNFYLRQNNSFLCLPCNCD-----KTGTINGSLLCNKSTGQCPCKLGVTGLRC 879
Query: 196 DRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C+ + Y+ C+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 880 NQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 931
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ G+V + C+S+ GQC S G+ + +
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHI--CNSLTGQCVCQDASIAGQRCDQCK- 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK V+G +C++C Y+ E GC C CN +G+V C GQC+CK
Sbjct: 660 GQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQNSGQCKCKA 719
Query: 239 NVEGAQC 245
NV G +C
Sbjct: 720 NVIGLRC 726
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++C+D+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCVCQDASIAGQRCDQCKDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1026 FVTGSKCDACVPSASHLD 1043
>gi|410977371|ref|XP_003995079.1| PREDICTED: laminin subunit alpha-1 [Felis catus]
Length = 3391
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 99/233 (42%), Gaps = 40/233 (17%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C YY C CNC+ GSL+ C EGRC C PGV G+KCD
Sbjct: 1238 DCKPHVTGQQCDRCSHGYYGLDTGLGCLPCNCSTPGSLSDDCTEEGRCHCVPGVAGEKCD 1297
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y F + G C P C GQC +RG +
Sbjct: 1298 RCARGFYAFQDGG-----CTPCDCAHTQHTCHPESGQCICPP-HTRG-----------AS 1340
Query: 148 FDPAGNRIWDLRRCKRDTYPLG-------HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCD 199
D + W RD LG GS QC+ GRC+CKP G C +C
Sbjct: 1341 CDECEDGYWG-----RDP-ELGCQACNCSAVGSATHQCDVLTGRCRCKPAFGGPSCHQCS 1394
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
+ + DF + C C+C+P G+ +T + C G C CK+NV G QC
Sbjct: 1395 LGYRDFPD--CVPCDCDPRGTSADTCDEEQSLCSCAEETGICSCKENVFGLQC 1445
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 103/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ G +CE+C D +Y GD C AC C+ GSL+ C+ E G C CK
Sbjct: 1184 GECLKCIGNTAGAHCERCADGFY---GDAVTAKNCCACECHGKGSLSGVCHLETGVCDCK 1240
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CDRC +Y GC C C+ GS+ + +C + GR H
Sbjct: 1241 PHVTGQQCDRCSHGYYGLDTGLGCLPCNCSTPGSLSD--DC------------TEEGRCH 1286
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
V K RC R Y GG C+ E G+C C P
Sbjct: 1287 CVPGVAGEK-----------CDRCARGFYAFQDGGCTPCDCAHTQHTCHPESGQCICPPH 1335
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G CD C+ ++ E GC++C C+ GS T CD + G+C CK G C
Sbjct: 1336 TRGASCDECEDGYWGRDPELGCQACNCSAVGSA--THQCDVLTGRCRCKPAFGGPSC 1390
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 64/142 (45%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+ + C++D + N G GG C+ C + G NCE C D YY+
Sbjct: 643 CNCHNKAQDCYYDGNVANQRRSLNTAGQFRGGGVCISCLQNTMGINCETCIDGYYRPHDV 702
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
DN C C+C+P GSL+ C + G+C CK G G+KCD C +
Sbjct: 703 SPYDDNPCRPCDCDPFGSLSSVCIKDKPQSGLHKGKWPGQCPCKEGYAGEKCDHCQFGYK 762
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
G C CEC+ AG V P
Sbjct: 763 --GYPACVRCECSRAGGVNEDP 782
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C G +C++C D Y+ + + C ACNC+ +GS QC+ GRC+CKP
Sbjct: 1328 GQCI-CPPHTRGASCDECEDGYWGRDPELGCQACNCSAVGSATHQCDVLTGRCRCKPAFG 1386
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
G C +C + + DF + C C+C+P G+ +T CD + C A+
Sbjct: 1387 GPSCHQCSLGYRDFPD--CVPCDCDPRGTSADT--CDEEQSLCSCAE 1429
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 102/251 (40%), Gaps = 54/251 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSL--------NLQCNSE 72
G C C+ + G +CE+C +Y + C C C P+ + +L+ E
Sbjct: 1071 GVCFACKHNTTGDHCEQCAPGFYGLPSRGTPRDCQQCAC-PLSTASNNFSPTCHLEDGDE 1129
Query: 73 GRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C QC PG +G C+RC +Y C C+C+ +CDSV G+C
Sbjct: 1130 VVCDQCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPLEAGHCDSVTGECLKC 1189
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-----------HG-GSLNL 176
++ G H E RC Y HG GSL+
Sbjct: 1190 IGNTAG-AHCE--------------------RCADGFYGDAVTAKNCCACECHGKGSLSG 1228
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQC 234
C+ E G C CKP VTG +CDRC +Y GC C C+ GS+ + +C +G+C
Sbjct: 1229 VCHLETGVCDCKPHVTGQQCDRCSHGYYGLDTGLGCLPCNCSTPGSLSD--DCTE-EGRC 1285
Query: 235 ECKDNVEGAQC 245
C V G +C
Sbjct: 1286 HCVPGVAGEKC 1296
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCK 78
H C C +G CE+C Y+ ++ C C+C+P GS++ C+ G+C C+
Sbjct: 1788 HDFRCDACILGYEGQYCERCSSGYHGNPRALGGTCQRCDCSPSGSVHGDCDRRSGQCVCR 1847
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
PG TG +C+ C+ H E+ C SC+ G + N + D++ S L+
Sbjct: 1848 PGATGLRCEECEPRHILL-ESDCVSCDDECVGVLLN--DLDNIGDAILSVNLT 1897
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G+KCD C + G C CEC+ AG V P + C CK+NVE
Sbjct: 741 GQCPCKEGYAGEKCDHCQFGYK--GYPACVRCECSRAGGVNEDPCSEP----CLCKENVE 794
Query: 242 GAQC 245
G C
Sbjct: 795 GENC 798
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 25/138 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
CNCN S+ C D E G CL+C G +C+ C Y+ K + C+ C
Sbjct: 1719 CNCNNHSDAC--DPE-------TGKCLNCSHSTTGDHCDLCAPGYFGKVTGSASDCSVCA 1769
Query: 59 C---NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C +P S + C EG RC C G G C+RC ++ A C+ C+C+
Sbjct: 1770 CPRSHP-ASFSPTCVLEGDHDFRCDACILGYEGQYCERCSSGYHGNPRALGGTCQRCDCS 1828
Query: 108 PAGSVKNTPNCDSVKGQC 125
P+GSV +CD GQC
Sbjct: 1829 PSGSVHG--DCDRRSGQC 1844
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 167 PLGHGGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPA 218
P H S + C EG RC C G G C+RC ++ A C+ C+C+P+
Sbjct: 1771 PRSHPASFSPTCVLEGDHDFRCDACILGYEGQYCERCSSGYHGNPRALGGTCQRCDCSPS 1830
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GSV +CD GQC C+ G +C
Sbjct: 1831 GSVHG--DCDRRSGQCVCRPGATGLRC 1855
>gi|358336576|dbj|GAA30984.2| laminin beta 1 [Clonorchis sinensis]
Length = 1714
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 104/231 (45%), Gaps = 46/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG + CFF+ LY +G+ GG+C C + +G NCE C+ N+Y+
Sbjct: 288 CECNGHATACFFNPILYASSGNVSGGNCHGCMHNTEGVNCEYCQQNFYRHPDYPINHSMT 347
Query: 54 CTACNCNPIGSLNL----------QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C CNC+ G+L Q + GRC CK V G+KCDRC V +++F + G
Sbjct: 348 CQPCNCHTDGALYAGFCQQYTIPEQNSVAGRCLCKKNVGGEKCDRCKVGYWNFQASNPEG 407
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C CN G++ N CD G C T R N D ++L
Sbjct: 408 CEPCTCNMMGTLDNG-GCDPYTGLC------------TCKRFVGGPNCDQCLEGYFNLTL 454
Query: 161 CKRDTYPLG-------HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
PLG G+ N CN + G+C+CK G TG C + + +Y
Sbjct: 455 A-----PLGCQECACSQLGAKNPNCNRATGQCECKVGFTGRDCAQVEDGYY 500
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 114/269 (42%), Gaps = 55/269 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CN SN C N+T G C +C+ + G CEKC++ +Y
Sbjct: 763 CFCNEMSNMC-------NQTT--GECENCRENTGGMYCEKCKEGFYGDPQRGTPCKPCAC 813
Query: 47 QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCK 102
G N T C P+ E C C+ G TG +CD C +N++ + G C+
Sbjct: 814 PGGGVNHATECRMGPL--------EEQICYCQVGYTGARCDECAMNYFGNPTELG-GSCR 864
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW-DLRR- 160
C+C+ ++ CD G+C +S G N D W D R
Sbjct: 865 PCQCSGNIALNEPGGCDPQTGRCLKCLHNSEGF-----------NCDVCKLGYWGDATRQ 913
Query: 161 -CKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECN 216
C+ + Y G CN +G+C C P V G +C C ++ GC+ C+C+
Sbjct: 914 MCQPCNCYAPGSVDEAKAGCNRDDGQCPCLPNVVGARCYECAPGFFNLTSGKGCEPCQCD 973
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P GS+ + CD++ GQC+CK + G +C
Sbjct: 974 PTGSMSD--KCDAITGQCQCKPDRSGRKC 1000
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 18/182 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ---CN-SEGRCQCKP 79
G CL C + +G NC+ C+ Y+ + C CNC GS++ CN +G+C C P
Sbjct: 885 GRCLKCLHNSEGFNCDVCKLGYWGDATRQMCQPCNCYAPGSVDEAKAGCNRDDGQCPCLP 944
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G +C C ++ GC+ C+C+P GS+ + CD++ GQC+ S +
Sbjct: 945 NVVGARCYECAPGFFNLTSGKGCEPCQCDPTGSMSD--KCDAITGQCQCKPDRSGRKCD- 1001
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
+ R F + N + C D G+++ C+S G+C C+ GV G +CDR
Sbjct: 1002 ----RCRPTFYGSPNEPDGCKPCNCD-----RSGAISDFCDSVTGQCPCRTGVAGRRCDR 1052
Query: 198 CD 199
CD
Sbjct: 1053 CD 1054
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDG--PNCE---KCRDNYYQKSGDNFCTACN 58
+G + RC +EL G DR G P CE + ++++G + C
Sbjct: 617 SGLARRCEVYRELAMDILSGR-----TEDRRGLPPECEVYFRLPRVSWRETG-SVAERCL 670
Query: 59 CNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
CN S C+ G+C CKPGV G +CDRC HY+FG GCK C CNP GSV
Sbjct: 671 CNTTWSETDICDKMTGQCVCKPGVVGRRCDRCAPYHYEFGSRGCKDCACNPQGSV 725
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 20/228 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR-CQCKPGVT 82
G C+ C+ G C++C +Y+ G C C CNP GS++LQC+ E C+C G+
Sbjct: 686 GQCV-CKPGVVGRRCDRCAPYHYE-FGSRGCKDCACNPQGSVSLQCDPETTLCRCHEGIV 743
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD C ++F C+ C CN ++ C+ G+CE+ + + G ++ E
Sbjct: 744 GKHCDTCKPGTWNFPR--CQPCFCNEMSNM-----CNQTTGECENCR-ENTGGMYCE--- 792
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
+ ++ F R + C + H + E C C+ G TG +CD C +N+
Sbjct: 793 KCKEGFYGDPQRGTPCKPCACPGGGVNHATECRMGPLEEQICYCQVGYTGARCDECAMNY 852
Query: 203 Y----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+ + G C+ C+C+ ++ CD G+C +C N EG C
Sbjct: 853 FGNPTELG-GSCRPCQCSGNIALNEPGGCDPQTGRCLKCLHNSEGFNC 899
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 103/232 (44%), Gaps = 32/232 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQ--CNSE-GRC-QCKPGVT 82
CQ G C++C NY+ + C C C+ +LN C+ + GRC +C
Sbjct: 836 CQVGYTGARCDECAMNYFGNPTELGGSCRPCQCSGNIALNEPGGCDPQTGRCLKCLHNSE 895
Query: 83 GDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNT-PNCDSVKGQCESAQLSSRGRVHT-- 138
G CD C + ++ D C+ C C GSV C+ GQC R +
Sbjct: 896 GFNCDVCKLGYWGDATRQMCQPCNCYAPGSVDEAKAGCNRDDGQCPCLPNVVGARCYECA 955
Query: 139 --ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
+ S K +P C+ D GS++ +C++ G+CQCKP +G KC
Sbjct: 956 PGFFNLTSGKGCEP----------CQCDP-----TGSMSDKCDAITGQCQCKPDRSGRKC 1000
Query: 196 DRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
DRC Y GCK C C+ +G++ + CDSV GQC C+ V G +C
Sbjct: 1001 DRCRPTFYGSPNEPDGCKPCNCDRSGAISDF--CDSVTGQCPCRTGVAGRRC 1050
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 177 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQ 233
Q + GRC CK V G+KCDRC V +++F + GC+ C CN G++ N CD G
Sbjct: 372 QNSVAGRCLCKKNVGGEKCDRCKVGYWNFQASNPEGCEPCTCNMMGTLDNG-GCDPYTGL 430
Query: 234 CECKDNVEGAQC 245
C CK V G C
Sbjct: 431 CTCKRFVGGPNC 442
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C CK V G CD+C +++ A GC+ C C+ G+ PNC+ GQCECK
Sbjct: 429 GLCTCKRFVGGPNCDQCLEGYFNLTLAPLGCQECACSQLGA--KNPNCNRATGQCECKVG 486
Query: 240 VEGAQC 245
G C
Sbjct: 487 FTGRDC 492
>gi|326679113|ref|XP_692838.5| PREDICTED: laminin subunit beta-1 [Danio rerio]
Length = 1779
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 72/145 (49%), Gaps = 20/145 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG SN+C FD +Y TG+ GG C +C + G NCE C+ YYQ +
Sbjct: 332 CNCNGHSNQCHFDMAVYLATGNVSGGVCNNCLHNTMGRNCESCKPFYYQDPEKDIRDPAA 391
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFG---EAG 100
C C+C+P+GS+ C+S G+C+CK V G +CD C HY G
Sbjct: 392 CVPCDCDPVGSVEGGVCDSHTDLDLGMIGGQCRCKQNVRGQRCDYCKEGHYGLSLDDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQC 125
C+ C C+P G CD + G C
Sbjct: 452 CQPCNCDPRGITTLGVPCDQISGDC 476
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 106/247 (42%), Gaps = 38/247 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNC---------NPIGSLNLQCN 70
G C DC+ + G CE+C D YY SG++ C C C N +
Sbjct: 867 GACYDCRDNTAGQLCERCVDGYYGNPALGSGEH-CRPCPCPGHPDSGHSNGASCEVDYAS 925
Query: 71 SEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCES 127
++ CQC G G +CDRC +Y E C+ C+CN ++ +CD G C
Sbjct: 926 NQILCQCGQGYAGPRCDRCAPGYYGDPEHPGGSCRPCQCNGNIDPQDPESCDPRTGLCLK 985
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------- 179
++ G +E ++ N I D RRC T G+L C
Sbjct: 986 CLYNTDGDSCSECKLGYYGN-----ALIQDCRRCTCVT-----AGTLPNSCTDGVCQCDK 1035
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK + G CD+C NH++FG + GC+ C C ++ + +C+ GQC C+
Sbjct: 1036 QTGQCPCKQNIIGHNCDQCATNHWNFGSDCGCEPCGCVQPNAL--STHCNMFSGQCHCQP 1093
Query: 239 NVEGAQC 245
G QC
Sbjct: 1094 GFGGRQC 1100
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +C+ G +C+CKP V G KC++C Y FG GC C+C+ G
Sbjct: 754 NGALGCQCDPQGSLSAECDRVGGQCRCKPNVIGRKCNQCAPGTYGFGPYGCTVCDCHSQG 813
Query: 111 SVKNTPNCDSVKGQC 125
SV + +CD V GQC
Sbjct: 814 SVGH--HCDPVTGQC 826
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 168 LGHGGSLNLQCNSE-----------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
+ H G+L QC+ + G+C+CKP V G KC++C Y FG GC C+C+
Sbjct: 751 IMHNGALGCQCDPQGSLSAECDRVGGQCRCKPNVIGRKCNQCAPGTYGFGPYGCTVCDCH 810
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GSV + +CD V GQC C+ G QC
Sbjct: 811 SQGSVGH--HCDPVTGQCMCRHGAIGRQC 837
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 26/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C + DG +C +C+ YY + C C C G+L C G+C
Sbjct: 981 GLCLKCLYNTDGDSCSECKLGYYGNALIQDCRRCTCVTAGTLPNSCTDGVCQCDKQTGQC 1040
Query: 76 QCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
CK + G CD+C NH++FG + GC+ C C ++ + +C+ GQC Q G
Sbjct: 1041 PCKQNIIGHNCDQCATNHWNFGSDCGCEPCGCVQPNAL--STHCNMFSGQCH-CQPGFGG 1097
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
R E F R+ +C+ + +PLG S QC+ + G C CK G +G
Sbjct: 1098 RQCNECEA-----FHWGDPRV----QCEECNCHPLGSETS---QCDRTTGACVCKDGASG 1145
Query: 193 DKCDRC 198
+CD C
Sbjct: 1146 QRCDEC 1151
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 97/231 (41%), Gaps = 40/231 (17%)
Query: 35 GPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQ----CNSE-GRC-QCKPGVTGDKC 86
GP C++C YY + C C CN G+++ Q C+ G C +C GD C
Sbjct: 938 GPRCDRCAPGYYGDPEHPGGSCRPCQCN--GNIDPQDPESCDPRTGLCLKCLYNTDGDSC 995
Query: 87 DRCDVNHY-DFGEAGCKSCECNPAGSVKNTPN-----CDSVKGQCESAQLSSRGRVHTEL 140
C + +Y + C+ C C AG++ N+ CD GQC Q + G
Sbjct: 996 SECKLGYYGNALIQDCRRCTCVTAGTLPNSCTDGVCQCDKQTGQCPCKQ-NIIGH----- 1049
Query: 141 RVQSRKNFDPAGNRIWDLRR---CKRDTYPLG--HGGSLNLQCNS-EGRCQCKPGVTGDK 194
N D W+ C+ P G +L+ CN G+C C+PG G +
Sbjct: 1050 ------NCDQCATNHWNFGSDCGCE----PCGCVQPNALSTHCNMFSGQCHCQPGFGGRQ 1099
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+ H+ C+ C C+P GS T CD G C CKD G +C
Sbjct: 1100 CNECEAFHWGDPRVQCEECNCHPLGS--ETSQCDRTTGACVCKDGASGQRC 1148
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 93/251 (37%), Gaps = 85/251 (33%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGSLNLQCN------ 70
G C+ C+ + G NCE+CRD Y+ + + C CNCN G N QC+
Sbjct: 293 GRCV-CKHNTVGLNCERCRDFYHDAPWRPAETDNAHTCRECNCN--GHSN-QCHFDMAVY 348
Query: 71 ------SEGRC-QCKPGVTGDKCDRCDVNHYDFGE------AGCKSCECNPAGSVKNTPN 117
S G C C G C+ C +Y E A C C+C+P GSV+
Sbjct: 349 LATGNVSGGVCNNCLHNTMGRNCESCKPFYYQDPEKDIRDPAACVPCDCDPVGSVEG--- 405
Query: 118 CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ 177
G C+S HT+L LG G
Sbjct: 406 -----GVCDS---------HTDLD--------------------------LGMIG----- 420
Query: 178 CNSEGRCQCKPGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQC 234
G+C+CK V G +CD C HY GC+ C C+P G CD + G C
Sbjct: 421 ----GQCRCKQNVRGQRCDYCKEGHYGLSLDDPLGCQPCNCDPRGITTLGVPCDQISGDC 476
Query: 235 ECKDNVEGAQC 245
CK V G C
Sbjct: 477 SCKRYVTGRYC 487
>gi|308492878|ref|XP_003108629.1| CRE-EPI-1 protein [Caenorhabditis remanei]
gi|308248369|gb|EFO92321.1| CRE-EPI-1 protein [Caenorhabditis remanei]
Length = 3753
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 103/229 (44%), Gaps = 32/229 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C G+ G C+KC +Y C C C G+ C+S G+C CK G++CDR
Sbjct: 630 CSGNFTGRTCDKCAAGFYNYPE---CRGCECLVSGAKGQTCDSNGQCYCKGNFEGERCDR 686
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C N Y+F C+ C CNP+G ++ CD V G+ S + GR+
Sbjct: 687 CKPNFYNF--PICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRI----------- 733
Query: 148 FDPAGNRIWDL--------RRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
D WDL R C+ +T G LN G+C CK G +CD+C
Sbjct: 734 CDQCKPTFWDLQYHHEDGCRSCECNTN--GTISGLNTCDLKTGQCMCKKNADGRRCDQCA 791
Query: 200 VNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y + + GC+SC C+ G+++ CD GQC+C+ V G +C
Sbjct: 792 EGFYRLNSYNQLGCESCHCDIGGALR--AECDIESGQCKCRPRVTGLRC 838
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 91/199 (45%), Gaps = 51/199 (25%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQ----CNSEGRCQCKPGV 81
C+G+ +G C++C+ N+Y NF C CNCNP G + + Q + C C+ V
Sbjct: 675 CKGNFEGERCDRCKPNFY-----NFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHV 729
Query: 82 TGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TG CD+C +D E GC+SCECN G++ CD GQC
Sbjct: 730 TGRICDQCKPTFWDLQYHHEDGCRSCECNTNGTISGLNTCDLKTGQC------------- 776
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-------------GGSLNLQCNSE-GRC 184
+KN D G R +C Y L GG+L +C+ E G+C
Sbjct: 777 ----MCKKNAD--GRR---CDQCAEGFYRLNSYNQLGCESCHCDIGGALRAECDIESGQC 827
Query: 185 QCKPGVTGDKCDRCDVNHY 203
+C+P VTG +CDR NHY
Sbjct: 828 KCRPRVTGLRCDRPIENHY 846
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 102/217 (47%), Gaps = 37/217 (17%)
Query: 41 CRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
C+ + + D + +C+C GS + QC G +C+CKP V G +C+RC +Y+F
Sbjct: 1412 CKQKIFSLTTDFNSAALSCDCVAQGSESFQCEEYGGQCKCKPNVIGRRCERCAPGYYNFP 1471
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR-----VQSRKNFDPAG 152
E C C+CN C+ GQC H E + V + +DP
Sbjct: 1472 E--CIKCQCNVGQ------QCEERTGQCFCPP-------HVEGQTCDRCVSNAFGYDP-- 1514
Query: 153 NRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
L C++ +P G G NL C+ E G+C C+ + G +CDRC Y F C
Sbjct: 1515 -----LIGCQKCGCHPQGSEGG-NLVCDPESGQCLCRESMGGRQCDRCLAGFYGFPH--C 1566
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C CN G+ + CD+ QC+CK+NV GA+C +
Sbjct: 1567 YGCSCNRDGTTEEI--CDATNAQCKCKENVYGARCEA 1601
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 116/275 (42%), Gaps = 66/275 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS----------- 49
C CNG S C D G C DC+ + G +CE C + +Y +
Sbjct: 1862 CECNGHSATCDPDT---------GICTDCEHNTHGDHCELCDEGHYGNATNGSPYDCMAC 1912
Query: 50 ------GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE----- 98
+NF +C+ + G L LQCN CKPG TGD+CDRC + FG+
Sbjct: 1913 ACPFAPSNNFAKSCDVSEEGQL-LQCN------CKPGYTGDRCDRCAAGY--FGQPQQVG 1963
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
C+ C CN ++ ++ C V G C + ++ GR H E Q A +
Sbjct: 1964 GSCEPCACNGNNNLTDSRACHPVSGDCYLCEQNTDGR-HCEWCAQWFYGDAVAAK---NC 2019
Query: 159 RRCKRDTYPLGHGGSLNLQCNSE------GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCK 211
C+ D QC S+ G C+CK V GD CDRC +H+ F + GC+
Sbjct: 2020 SSCECD------------QCGSQYCDNKSGGCECKTNVEGDSCDRCIADHWGFSKCQGCQ 2067
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+C C G+ C+ GQC C+ G +C
Sbjct: 2068 ACHC---GTAAFNTQCNVENGQCTCRPGATGMRCE 2099
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 108/239 (45%), Gaps = 48/239 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ G C++C YY G C C+C+ G+ + +C+S G+C C T
Sbjct: 580 GQCL-CKEGFAGDKCDRCDIAYY---GYPNCKQCSCDGAGTTSPECDSTSGQCPCSGNFT 635
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C Y++ E C+ CEC +G+ T CDS GQC
Sbjct: 636 GRTCDKCAAGFYNYPE--CRGCECLVSGAKGQT--CDS-NGQC----------------- 673
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTY--PL-------GHGGSLNLQ----CNSEGRCQCKPG 189
+ NF+ G R RCK + Y P+ G + + Q + C C+
Sbjct: 674 YCKGNFE--GER---CDRCKPNFYNFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKH 728
Query: 190 VTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG CD+C +D E GC+SCECN G++ CD GQC CK N +G +C
Sbjct: 729 VTGRICDQCKPTFWDLQYHHEDGCRSCECNTNGTISGLNTCDLKTGQCMCKKNADGRRC 787
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 103/264 (39%), Gaps = 80/264 (30%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP-------------- 79
G C+ C D + + C C C+ GS + C++ G+C+CKP
Sbjct: 498 GTFCDTCADGFTNVTAG--CVECVCDSTGSEHSNCSAATGQCECKPAYAGLSCDKCQVGY 555
Query: 80 -------------------------------GVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
G GDKCDRCD+ +Y G CK C C+
Sbjct: 556 YGDDCKFCNCDPMGTEGGVCDQTTGQCLCKEGFAGDKCDRCDIAYY--GYPNCKQCSCDG 613
Query: 109 AGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
AG+ +P CDS GQC S + R D ++ C+
Sbjct: 614 AGT--TSPECDSTSGQCPCSGNFTGR-------------TCDKCAAGFYNYPECR----- 653
Query: 168 LG----HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
G G+ C+S G+C CK G++CDRC N Y+F C+ C CNP+G ++
Sbjct: 654 -GCECLVSGAKGQTCDSNGQCYCKGNFEGERCDRCKPNFYNF--PICEECNCNPSGVTRD 710
Query: 224 TPNCDSVKG--QCECKDNVEGAQC 245
CD V C C+ +V G C
Sbjct: 711 FQGCDKVSPGELCSCRKHVTGRIC 734
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 18/139 (12%)
Query: 1 CNCNGFSNRCFFDKEL-YNRTGH--------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC G SN C++D+++ N+ GG C++C+ + +G NC KC YY+ G
Sbjct: 356 CNCFGRSNECYYDEQVDLNKQSVDSKGNYEGGGVCVNCRDNTEGINCNKCSYGYYRPEGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C AC+C+P G+C+C+ G+ CD+C +YD E CK CEC
Sbjct: 416 TWDEPQPCKACDCDPDKHTGSCAEETGKCECQARFVGENCDQCAPGYYDPPE--CKPCEC 473
Query: 107 NPAGSVKNTPNCDSVKGQC 125
G+V + C GQC
Sbjct: 474 FVNGTVGDV--CLPENGQC 490
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C+ + +G +C++C +++ S C AC+C + N QCN E G+C C+PG TG +C
Sbjct: 2040 ECKTNVEGDSCDRCIADHWGFSKCQGCQACHCG-TAAFNTQCNVENGQCTCRPGATGMRC 2098
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ C+ ++++GE GC C+C S+ CD GQC
Sbjct: 2099 EHCEHGYWNYGEHGCDKCDCESDLSMGTV--CDVRTGQC 2135
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
+ N QCN E G+C C+PG TG +C+ C+ ++++GE GC C+C S+ CD
Sbjct: 2074 AAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCESDLSMGTV--CDVR 2131
Query: 231 KGQCECKDNVEGAQC 245
GQC C++ G++C
Sbjct: 2132 TGQCHCQEGATGSRC 2146
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 45/207 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G C C+ + DG +CE C +Y GD C++C C+ GS N G C+CK
Sbjct: 1988 GDCYLCEQNTDGRHCEWCAQWFY---GDAVAAKNCSSCECDQCGSQYCD-NKSGGCECKT 2043
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V GD CDRC +H+ F + GC++C C G+ C+ GQC ++ R
Sbjct: 2044 NVEGDSCDRCIADHWGFSKCQGCQACHC---GTAAFNTQCNVENGQCTCRPGATGMRC-- 2098
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSE-GRCQCK 187
C+ + G G S+ C+ G+C C+
Sbjct: 2099 --------------------EHCEHGYWNYGEHGCDKCDCESDLSMGTVCDVRTGQCHCQ 2138
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G TG +CD+C ++ GC+ C+
Sbjct: 2139 EGATGSRCDQCLPSYLRIPTHGCRRCD 2165
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPG 80
G C+ C+ + DG C++C + +Y+ + N C +C+C+ G+L +C+ E G+C+C+P
Sbjct: 774 GQCM-CKKNADGRRCDQCAEGFYRLNSYNQLGCESCHCDIGGALRAECDIESGQCKCRPR 832
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR-VHTE 139
VTG +CDR NHY F E A + P +V + + A S RG V +
Sbjct: 833 VTGLRCDRPIENHY-FPTLWHNQYEAEDAHTEDQRPVRFAVDPE-QFANFSWRGYAVFSP 890
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
++ + + D ++ L R+ P+ +++
Sbjct: 891 IQEKILLDVDITKASVYRLLFRYRNPTPVPITAIVSI 927
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 82/210 (39%), Gaps = 48/210 (22%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCK 78
+GG C C+ + G CE+C YY NF C C CN + QC G+C C
Sbjct: 1445 YGGQC-KCKPNVIGRRCERCAPGYY-----NFPECIKCQCN----VGQQCEERTGQCFCP 1494
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CDRC N + + GC+ C C+P GS CD GQC +
Sbjct: 1495 PHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRE-------- 1546
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH--------GGSLNLQCNSE-GRCQCKP 188
G R D RC Y H G+ C++ +C+CK
Sbjct: 1547 ------------SMGGRQCD--RCLAGFYGFPHCYGCSCNRDGTTEEICDATNAQCKCKE 1592
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
V G +C+ C +D GC +C C
Sbjct: 1593 NVYGARCEACKAGTFDLSAENPLGCVNCFC 1622
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 87/233 (37%), Gaps = 75/233 (32%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVTG 83
C GP+C+ C Y++ S +F C C CN + C+ + G C C+ G
Sbjct: 1831 CPAPYTGPSCQLCASGYHRVSSGSFLGACVPCECN---GHSATCDPDTGICTDCEHNTHG 1887
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
D C+ CD HY G C +C C A S +CD +S G++
Sbjct: 1888 DHCELCDEGHYGNATNGSPYDCMACACPFAPSNNFAKSCD----------VSEEGQL--- 1934
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
LQCN CKPG TGD+CDRC
Sbjct: 1935 ------------------------------------LQCN------CKPGYTGDRCDRCA 1952
Query: 200 VNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQCR 246
+ FG+ C+ C CN ++ ++ C V G C C+ N +G C
Sbjct: 1953 AGY--FGQPQQVGGSCEPCACNGNNNLTDSRACHPVSGDCYLCEQNTDGRHCE 2003
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNP---IGSLNLQCNSEGRCQCK 78
G C+ G C++C+ ++ Q ++ C +C CN I LN G+C CK
Sbjct: 720 GELCSCRKHVTGRICDQCKPTFWDLQYHHEDGCRSCECNTNGTISGLNTCDLKTGQCMCK 779
Query: 79 PGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G +CD+C Y + + GC+SC C+ G+++ CD GQC+
Sbjct: 780 KNADGRRCDQCAEGFYRLNSYNQLGCESCHCDIGGALR--AECDIESGQCK 828
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
P H GS C E G+C+C+ G+ CD+C +YD E CK CEC G+V +
Sbjct: 430 PDKHTGS----CAEETGKCECQARFVGENCDQCAPGYYDPPE--CKPCECFVNGTVGDV- 482
Query: 226 NCDSVKGQCECKDNVEGAQC 245
C GQC CK G C
Sbjct: 483 -CLPENGQCPCKPGFGGTFC 501
>gi|71991177|ref|NP_001023281.1| Protein EPI-1, isoform a [Caenorhabditis elegans]
gi|1845538|dbj|BAA19229.1| laminin alpha [Caenorhabditis elegans]
gi|3417453|dbj|BAA32347.1| laminin alpha chain [Caenorhabditis elegans]
gi|6434305|emb|CAB61016.1| Protein EPI-1, isoform a [Caenorhabditis elegans]
Length = 3704
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C G+ G C+KC +Y C C C G+ C+S G+C CK G++CDR
Sbjct: 631 CNGNFTGRTCDKCAAGFYNYPD---CRGCECLLSGAKGQTCDSNGQCYCKGNFEGERCDR 687
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C N Y+F C+ C CNP+G ++ CD V G+ S + GR+
Sbjct: 688 CKPNFYNF--PICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRI----------- 734
Query: 148 FDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
D WDL+ D G LN G+C CK G +CD+C
Sbjct: 735 CDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRCDQCADG 794
Query: 202 HY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y + + GC+SC C+ G+++ CD GQC+C+ V G +C
Sbjct: 795 FYRLNSYNQMGCESCHCDIGGALR--AECDITSGQCKCRPRVTGLRC 839
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 113/259 (43%), Gaps = 35/259 (13%)
Query: 1 CNCNGFSNRCFFDKEL-YNRTGH--------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC G SN C +D E+ N+ GG C +C+ + +G NC KC Y++ G
Sbjct: 357 CNCFGRSNECEYDAEVDLNKQSIDSQGNYEGGGVCKNCRENTEGVNCNKCSFGYFRPEGV 416
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+C+P G+C+C P G+ CD+C +YD CK CEC
Sbjct: 417 TWNEPQPCKVCDCDPDKHTGACAEETGKCECLPRFVGEDCDQCASGYYD--APKCKPCEC 474
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
N G++ + C GQC + G E N AG C D
Sbjct: 475 NVNGTIGDV--CLPEDGQCPCK--AGFGGTFCETCADGYTNVT-AG-----CVECVCDAT 524
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
HG S G+C+CKP G CD+C V + FG+ CK C C+P G+
Sbjct: 525 GSEHGNC----SASTGQCECKPAYAGLSCDKCQVGY--FGD-DCKFCNCDPMGTEGGV-- 575
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC CK+ G +C
Sbjct: 576 CDQTTGQCLCKEGFAGDKC 594
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 99/200 (49%), Gaps = 35/200 (17%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+C+C GS + QC G +C+CKPGV G +C+RC +Y+F E C C+CN AG
Sbjct: 1414 SCDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYNFPE--CIKCQCN-AGQ--- 1467
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELR-----VQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
CD GQC H E + V + +DP L C++ +P
Sbjct: 1468 --QCDERTGQCFCPP-------HVEGQTCDRCVSNAFGYDP-------LIGCQKCGCHPQ 1511
Query: 169 GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G G NL C+ E G+C C+ + G +CDRC Y F C C CN AG+ + C
Sbjct: 1512 GSEGG-NLVCDPESGQCLCRESMGGRQCDRCLAGFYGFPH--CYGCSCNRAGTTEEI--C 1566
Query: 228 DSVKGQCECKDNVEGAQCRS 247
D+ QC+CK+NV G +C +
Sbjct: 1567 DATNAQCKCKENVYGGRCEA 1586
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 91/199 (45%), Gaps = 51/199 (25%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQ----CNSEGRCQCKPGV 81
C+G+ +G C++C+ N+Y NF C CNCNP G + + Q + C C+ V
Sbjct: 676 CKGNFEGERCDRCKPNFY-----NFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHV 730
Query: 82 TGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TG CD+C +D E GC+SC+CN G++ CD GQC
Sbjct: 731 TGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQC------------- 777
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-------------GGSLNLQCN-SEGRC 184
+KN D G R +C Y L GG+L +C+ + G+C
Sbjct: 778 ----MCKKNAD--GRR---CDQCADGFYRLNSYNQMGCESCHCDIGGALRAECDITSGQC 828
Query: 185 QCKPGVTGDKCDRCDVNHY 203
+C+P VTG +CD+ NHY
Sbjct: 829 KCRPRVTGLRCDQPIENHY 847
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 112/282 (39%), Gaps = 80/282 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS----------- 49
C CNG S C D G C DC+ + +G +CE C + +Y +
Sbjct: 1830 CECNGHSATCDPDT---------GICTDCEHNTNGDHCEFCNEGHYGNATNGSPYDCMAC 1880
Query: 50 ------GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCD---VNHYDFGEAG 100
+NF +C+ + G L LQCN CKPG TGD+CDRC H
Sbjct: 1881 ACPFAPTNNFAKSCDVSEEGQL-LQCN------CKPGYTGDRCDRCASGFFGHPQISGES 1933
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C C+CN ++ ++ +C G C + ++ GR H E
Sbjct: 1934 CSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGR-HCE--------------------S 1972
Query: 161 CKRDTYPLGHGGSLNL---------QCNSE------GRCQCKPGVTGDKCDRCDVNHYDF 205
C Y G ++ QC S+ G C+CK V GD CDRC +H+ F
Sbjct: 1973 CAAWFY----GDAVTAKNCSSCECSQCGSQYCDNKSGGCECKINVEGDSCDRCKPDHWGF 2028
Query: 206 GE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ GC+ C C G+ C+ GQC C+ G +C
Sbjct: 2029 SKCQGCQGCHC---GTAAFNTQCNVENGQCTCRPGATGMRCE 2067
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 107/239 (44%), Gaps = 48/239 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ G C++C +Y G C AC C+ G + +C+ + G+C C T
Sbjct: 581 GQCL-CKEGFAGDKCDRCDIAFY---GYPNCKACACDGAGITSPECDATSGQCPCNGNFT 636
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C Y++ + C+ CEC +G+ T CDS GQC
Sbjct: 637 GRTCDKCAAGFYNYPD--CRGCECLLSGAKGQT--CDS-NGQC----------------- 674
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTY--PL-------GHGGSLNLQ----CNSEGRCQCKPG 189
+ NF+ G R RCK + Y P+ G + + Q + C C+
Sbjct: 675 YCKGNFE--GER---CDRCKPNFYNFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKH 729
Query: 190 VTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG CD+C +D E GC+SC+CN G++ CD GQC CK N +G +C
Sbjct: 730 VTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRC 788
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C+ + +G +C++C+ +++ S C C+C + N QCN E G+C C+PG TG +C
Sbjct: 2008 ECKINVEGDSCDRCKPDHWGFSKCQGCQGCHCG-TAAFNTQCNVENGQCTCRPGATGMRC 2066
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ C+ ++++GE GC C+C S+ CD GQC
Sbjct: 2067 EHCEHGYWNYGEHGCDKCDCEADLSMGTV--CDVRTGQC 2103
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
+ N QCN E G+C C+PG TG +C+ C+ ++++GE GC C+C S+ CD
Sbjct: 2042 AAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTV--CDVR 2099
Query: 231 KGQCECKDNVEGAQC 245
GQC C++ G++C
Sbjct: 2100 TGQCHCQEGATGSRC 2114
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 45/207 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G C C+ + DG +CE C +Y GD C++C C+ GS N G C+CK
Sbjct: 1956 GDCYLCEQNTDGRHCESCAAWFY---GDAVTAKNCSSCECSQCGSQYCD-NKSGGCECKI 2011
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V GD CDRC +H+ F + GC+ C C G+ C+ GQC ++ R
Sbjct: 2012 NVEGDSCDRCKPDHWGFSKCQGCQGCHC---GTAAFNTQCNVENGQCTCRPGATGMRC-- 2066
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSE-GRCQCK 187
C+ + G G S+ C+ G+C C+
Sbjct: 2067 --------------------EHCEHGYWNYGEHGCDKCDCEADLSMGTVCDVRTGQCHCQ 2106
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G TG +CD+C ++ GC+ C+
Sbjct: 2107 EGATGSRCDQCLPSYLRIPTYGCRRCD 2133
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPG 80
G C+ C+ + DG C++C D +Y+ + N C +C+C+ G+L +C+ + G+C+C+P
Sbjct: 775 GQCM-CKKNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALRAECDITSGQCKCRPR 833
Query: 81 VTGDKCDRCDVNHY 94
VTG +CD+ NHY
Sbjct: 834 VTGLRCDQPIENHY 847
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 81/210 (38%), Gaps = 48/210 (22%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCK 78
+GG C C+ G CE+C YY NF C C CN QC+ G+C C
Sbjct: 1430 YGGQC-KCKPGVIGRRCERCAPGYY-----NFPECIKCQCNA----GQQCDERTGQCFCP 1479
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CDRC N + + GC+ C C+P GS CD GQC +
Sbjct: 1480 PHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRE-------- 1531
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH--------GGSLNLQCNSE-GRCQCKP 188
G R D RC Y H G+ C++ +C+CK
Sbjct: 1532 ------------SMGGRQCD--RCLAGFYGFPHCYGCSCNRAGTTEEICDATNAQCKCKE 1577
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
V G +C+ C +D GC +C C
Sbjct: 1578 NVYGGRCEACKAGTFDLSAENPLGCVNCFC 1607
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCN---PIGSLNLQCNSEGRCQCK 78
G C+ G C++C+ ++ Q ++ C +C+CN I LN G+C CK
Sbjct: 721 GELCSCRKHVTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCK 780
Query: 79 PGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G +CD+C Y + + GC+SC C+ G+++ CD GQC+
Sbjct: 781 KNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALR--AECDITSGQCK 829
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 84/232 (36%), Gaps = 71/232 (30%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVTG 83
C GP+C+ C Y++ +F C C CN + C+ + G C C+ G
Sbjct: 1799 CPAPYTGPSCQLCASGYHRVQSGSFLGACVPCECN---GHSATCDPDTGICTDCEHNTNG 1855
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
D C+ C+ HY G C +C C A + +CD +S G++
Sbjct: 1856 DHCEFCNEGHYGNATNGSPYDCMACACPFAPTNNFAKSCD----------VSEEGQL--- 1902
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
LQCN CKPG TGD+CDRC
Sbjct: 1903 ------------------------------------LQCN------CKPGYTGDRCDRCA 1920
Query: 200 ---VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQCRS 247
H C C+CN ++ ++ +C G C C+ N +G C S
Sbjct: 1921 SGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCES 1972
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ G CE C Y+ G++ C C+C S+ C+ G+C C+ G TG +CD
Sbjct: 2057 CRPGATGMRCEHCEHGYWNY-GEHGCDKCDCEADLSMGTVCDVRTGQCHCQEGATGSRCD 2115
Query: 88 RCDVNHYDFGEAGCKSC-EC--NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
+C ++ GC+ C EC + G V N V G A +SS V L ++
Sbjct: 2116 QCLPSYLRIPTYGCRRCDECVHHLIGDVDNLELEIDVLGTA-IANISSATIVGARL-ARN 2173
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+K F+ N I + + +++ G + ++ NS
Sbjct: 2174 KKEFNDI-NEITKMLNDEENSFGNVFGDAQDILTNS 2208
>gi|392900542|ref|NP_001255500.1| Protein EPI-1, isoform c [Caenorhabditis elegans]
gi|225877996|emb|CAX65067.1| Protein EPI-1, isoform c [Caenorhabditis elegans]
Length = 3683
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C G+ G C+KC +Y C C C G+ C+S G+C CK G++CDR
Sbjct: 631 CNGNFTGRTCDKCAAGFYNYPD---CRGCECLLSGAKGQTCDSNGQCYCKGNFEGERCDR 687
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C N Y+F C+ C CNP+G ++ CD V G+ S + GR+
Sbjct: 688 CKPNFYNF--PICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRI----------- 734
Query: 148 FDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
D WDL+ D G LN G+C CK G +CD+C
Sbjct: 735 CDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRCDQCADG 794
Query: 202 HY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y + + GC+SC C+ G+++ CD GQC+C+ V G +C
Sbjct: 795 FYRLNSYNQMGCESCHCDIGGALR--AECDITSGQCKCRPRVTGLRC 839
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 113/259 (43%), Gaps = 35/259 (13%)
Query: 1 CNCNGFSNRCFFDKEL-YNRTGH--------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC G SN C +D E+ N+ GG C +C+ + +G NC KC Y++ G
Sbjct: 357 CNCFGRSNECEYDAEVDLNKQSIDSQGNYEGGGVCKNCRENTEGVNCNKCSFGYFRPEGV 416
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+C+P G+C+C P G+ CD+C +YD CK CEC
Sbjct: 417 TWNEPQPCKVCDCDPDKHTGACAEETGKCECLPRFVGEDCDQCASGYYD--APKCKPCEC 474
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
N G++ + C GQC + G E N AG C D
Sbjct: 475 NVNGTIGDV--CLPEDGQCPCK--AGFGGTFCETCADGYTNVT-AG-----CVECVCDAT 524
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
HG S G+C+CKP G CD+C V + FG+ CK C C+P G+
Sbjct: 525 GSEHGNC----SASTGQCECKPAYAGLSCDKCQVGY--FGD-DCKFCNCDPMGTEGGV-- 575
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC CK+ G +C
Sbjct: 576 CDQTTGQCLCKEGFAGDKC 594
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 99/200 (49%), Gaps = 35/200 (17%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+C+C GS + QC G +C+CKPGV G +C+RC +Y+F E C C+CN AG
Sbjct: 1425 SCDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYNFPE--CIKCQCN-AGQ--- 1478
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELR-----VQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
CD GQC H E + V + +DP L C++ +P
Sbjct: 1479 --QCDERTGQCFCPP-------HVEGQTCDRCVSNAFGYDP-------LIGCQKCGCHPQ 1522
Query: 169 GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G G NL C+ E G+C C+ + G +CDRC Y F C C CN AG+ + C
Sbjct: 1523 GSEGG-NLVCDPESGQCLCRESMGGRQCDRCLAGFYGFPH--CYGCSCNRAGTTEEI--C 1577
Query: 228 DSVKGQCECKDNVEGAQCRS 247
D+ QC+CK+NV G +C +
Sbjct: 1578 DATNAQCKCKENVYGGRCEA 1597
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 91/199 (45%), Gaps = 51/199 (25%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQ----CNSEGRCQCKPGV 81
C+G+ +G C++C+ N+Y NF C CNCNP G + + Q + C C+ V
Sbjct: 676 CKGNFEGERCDRCKPNFY-----NFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHV 730
Query: 82 TGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TG CD+C +D E GC+SC+CN G++ CD GQC
Sbjct: 731 TGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQC------------- 777
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-------------GGSLNLQCN-SEGRC 184
+KN D G R +C Y L GG+L +C+ + G+C
Sbjct: 778 ----MCKKNAD--GRR---CDQCADGFYRLNSYNQMGCESCHCDIGGALRAECDITSGQC 828
Query: 185 QCKPGVTGDKCDRCDVNHY 203
+C+P VTG +CD+ NHY
Sbjct: 829 KCRPRVTGLRCDQPIENHY 847
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 112/282 (39%), Gaps = 80/282 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS----------- 49
C CNG S C D G C DC+ + +G +CE C + +Y +
Sbjct: 1841 CECNGHSATCDPDT---------GICTDCEHNTNGDHCEFCNEGHYGNATNGSPYDCMAC 1891
Query: 50 ------GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCD---VNHYDFGEAG 100
+NF +C+ + G L LQCN CKPG TGD+CDRC H
Sbjct: 1892 ACPFAPTNNFAKSCDVSEEGQL-LQCN------CKPGYTGDRCDRCASGFFGHPQISGES 1944
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C C+CN ++ ++ +C G C + ++ GR H E
Sbjct: 1945 CSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGR-HCE--------------------S 1983
Query: 161 CKRDTYPLGHGGSLNL---------QCNSE------GRCQCKPGVTGDKCDRCDVNHYDF 205
C Y G ++ QC S+ G C+CK V GD CDRC +H+ F
Sbjct: 1984 CAAWFY----GDAVTAKNCSSCECSQCGSQYCDNKSGGCECKINVEGDSCDRCKPDHWGF 2039
Query: 206 GE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ GC+ C C G+ C+ GQC C+ G +C
Sbjct: 2040 SKCQGCQGCHC---GTAAFNTQCNVENGQCTCRPGATGMRCE 2078
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 107/239 (44%), Gaps = 48/239 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ G C++C +Y G C AC C+ G + +C+ + G+C C T
Sbjct: 581 GQCL-CKEGFAGDKCDRCDIAFY---GYPNCKACACDGAGITSPECDATSGQCPCNGNFT 636
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C Y++ + C+ CEC +G+ T CDS GQC
Sbjct: 637 GRTCDKCAAGFYNYPD--CRGCECLLSGAKGQT--CDS-NGQC----------------- 674
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTY--PL-------GHGGSLNLQ----CNSEGRCQCKPG 189
+ NF+ G R RCK + Y P+ G + + Q + C C+
Sbjct: 675 YCKGNFE--GER---CDRCKPNFYNFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKH 729
Query: 190 VTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG CD+C +D E GC+SC+CN G++ CD GQC CK N +G +C
Sbjct: 730 VTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRC 788
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C+ + +G +C++C+ +++ S C C+C + N QCN E G+C C+PG TG +C
Sbjct: 2019 ECKINVEGDSCDRCKPDHWGFSKCQGCQGCHCG-TAAFNTQCNVENGQCTCRPGATGMRC 2077
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ C+ ++++GE GC C+C S+ CD GQC
Sbjct: 2078 EHCEHGYWNYGEHGCDKCDCEADLSMGTV--CDVRTGQC 2114
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
+ N QCN E G+C C+PG TG +C+ C+ ++++GE GC C+C S+ CD
Sbjct: 2053 AAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTV--CDVR 2110
Query: 231 KGQCECKDNVEGAQC 245
GQC C++ G++C
Sbjct: 2111 TGQCHCQEGATGSRC 2125
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 45/207 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G C C+ + DG +CE C +Y GD C++C C+ GS N G C+CK
Sbjct: 1967 GDCYLCEQNTDGRHCESCAAWFY---GDAVTAKNCSSCECSQCGSQYCD-NKSGGCECKI 2022
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V GD CDRC +H+ F + GC+ C C G+ C+ GQC ++ R
Sbjct: 2023 NVEGDSCDRCKPDHWGFSKCQGCQGCHC---GTAAFNTQCNVENGQCTCRPGATGMRC-- 2077
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSE-GRCQCK 187
C+ + G G S+ C+ G+C C+
Sbjct: 2078 --------------------EHCEHGYWNYGEHGCDKCDCEADLSMGTVCDVRTGQCHCQ 2117
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G TG +CD+C ++ GC+ C+
Sbjct: 2118 EGATGSRCDQCLPSYLRIPTYGCRRCD 2144
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPG 80
G C+ C+ + DG C++C D +Y+ + N C +C+C+ G+L +C+ + G+C+C+P
Sbjct: 775 GQCM-CKKNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALRAECDITSGQCKCRPR 833
Query: 81 VTGDKCDRCDVNHY 94
VTG +CD+ NHY
Sbjct: 834 VTGLRCDQPIENHY 847
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 81/210 (38%), Gaps = 48/210 (22%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCK 78
+GG C C+ G CE+C YY NF C C CN QC+ G+C C
Sbjct: 1441 YGGQC-KCKPGVIGRRCERCAPGYY-----NFPECIKCQCNA----GQQCDERTGQCFCP 1490
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CDRC N + + GC+ C C+P GS CD GQC +
Sbjct: 1491 PHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRE-------- 1542
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH--------GGSLNLQCNSE-GRCQCKP 188
G R D RC Y H G+ C++ +C+CK
Sbjct: 1543 ------------SMGGRQCD--RCLAGFYGFPHCYGCSCNRAGTTEEICDATNAQCKCKE 1588
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
V G +C+ C +D GC +C C
Sbjct: 1589 NVYGGRCEACKAGTFDLSAENPLGCVNCFC 1618
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCN---PIGSLNLQCNSEGRCQCK 78
G C+ G C++C+ ++ Q ++ C +C+CN I LN G+C CK
Sbjct: 721 GELCSCRKHVTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCK 780
Query: 79 PGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G +CD+C Y + + GC+SC C+ G+++ CD GQC+
Sbjct: 781 KNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALR--AECDITSGQCK 829
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 84/232 (36%), Gaps = 71/232 (30%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVTG 83
C GP+C+ C Y++ +F C C CN + C+ + G C C+ G
Sbjct: 1810 CPAPYTGPSCQLCASGYHRVQSGSFLGACVPCECN---GHSATCDPDTGICTDCEHNTNG 1866
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
D C+ C+ HY G C +C C A + +CD +S G++
Sbjct: 1867 DHCEFCNEGHYGNATNGSPYDCMACACPFAPTNNFAKSCD----------VSEEGQL--- 1913
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
LQCN CKPG TGD+CDRC
Sbjct: 1914 ------------------------------------LQCN------CKPGYTGDRCDRCA 1931
Query: 200 ---VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQCRS 247
H C C+CN ++ ++ +C G C C+ N +G C S
Sbjct: 1932 SGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCES 1983
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ G CE C Y+ G++ C C+C S+ C+ G+C C+ G TG +CD
Sbjct: 2068 CRPGATGMRCEHCEHGYWNY-GEHGCDKCDCEADLSMGTVCDVRTGQCHCQEGATGSRCD 2126
Query: 88 RCDVNHYDFGEAGCKSC-EC--NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
+C ++ GC+ C EC + G V N V G A +SS V L ++
Sbjct: 2127 QCLPSYLRIPTYGCRRCDECVHHLIGDVDNLELEIDVLGTA-IANISSATIVGARL-ARN 2184
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+K F+ N I + + +++ G + ++ NS
Sbjct: 2185 KKEFNDI-NEITKMLNDEENSFGNVFGDAQDILTNS 2219
>gi|313243973|emb|CBY14851.1| unnamed protein product [Oikopleura dioica]
Length = 1847
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 102/225 (45%), Gaps = 32/225 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRT--GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C G + C FD ++Y T GG C C+ + +G CE+C + YYQ N
Sbjct: 336 CECYGHATECHFDPDVYEATDSTSGGVCEQCKHNTEGRMCERCIEGYYQDPLKNINDPEI 395
Query: 54 CTACNCNPIGSLNL---------QCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGC 101
C C+C P G + GRC+CK V G++CD+C + GC
Sbjct: 396 CVLCDCEPAGVVGACDRATIPGPDGTVAGRCRCKANVMGERCDQCKPGFHSLDPNNPNGC 455
Query: 102 KSCECNPAGSV-KNTPNCDSVKGQCESAQLSSRGRVHT-ELRVQSRKNFDPAGNRIWDLR 159
C+C+ GSV + CD + GQC + GR T + D G +
Sbjct: 456 SPCDCDDRGSVMRGGSICDPLNGQCHCKSNVTGGRCDTCAPHTYGLSSGDADG-----CK 510
Query: 160 RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
+C+ D GGSLN CN+ +G+C C+P +TG +C+ +H+
Sbjct: 511 KCRCDI-----GGSLNQNCNTVDGKCICRPNITGQRCNDVKEDHF 550
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 106/303 (34%), Gaps = 88/303 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG +N C G CL C D G NCE+C D YY
Sbjct: 880 CECNGHANEC---------DSVSGECLSCAHDTTGANCERCADGYYGDPTSVTNIQCTPC 930
Query: 47 -----QKSGDNFCTACNCNPI-GSLNLQCNSEG------RCQCKPGVTGDKCDRCDVNHY 94
KS F C + + GS + + ++ G C C PG G +CD+C H+
Sbjct: 931 PCPDGPKSNRQFADTCGLSRMRGSSSREDDARGPRPSMVMCNCNPGYQGLQCDQCAPGHF 990
Query: 95 -----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD 149
FG C CECN + CD+ G+C L +RG
Sbjct: 991 GNPMEPFG--SCNPCECNGNIDTSDPDACDARTGECLKC-LYNRG--------------- 1032
Query: 150 PAGNRIWDLRRCKRDTYPLGHGGSLNLQC-------------------NSEGRCQCKPGV 190
G+ D C Y + + C G+C C V
Sbjct: 1033 --GD---DCSECADGYYEQPNADGTDFTCVPCGCDERGGDPFIGNTCDKKTGQCACLDKV 1087
Query: 191 TGDKCDRCDVNHYDFGEA----GCKSCECNPAGS--VKNTPNCDSVKGQCECKDNVEGAQ 244
G C C N +D A GC++C C+P S + CD V GQC CK G
Sbjct: 1088 EGRTCSSCRNNFFDLVNAVENGGCQACGCDPENSEDISGEQPCDMVTGQCRCKPGFGGRD 1147
Query: 245 CRS 247
C+S
Sbjct: 1148 CKS 1150
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS++ C+ S G+C+C+ GVTG C++C + F GC+ C+CN G+V C+
Sbjct: 790 GSISRSCDPSGGQCECREGVTGRTCNQCAAGFFGFSHTGCQMCDCNRRGTVNQGQFCEQQ 849
Query: 231 KGQCECKDNVEGAQC 245
GQC+C + V G QC
Sbjct: 850 SGQCQCLEGVGGRQC 864
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 56 ACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+C C+ GS++ C+ S G+C+C+ GVTG C++C + F GC+ C+CN G+V
Sbjct: 783 SCECDQTGSISRSCDPSGGQCECREGVTGRTCNQCAAGFFGFSHTGCQMCDCNRRGTVNQ 842
Query: 115 TPNCDSVKGQCE 126
C+ GQC+
Sbjct: 843 GQFCEQQSGQCQ 854
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 86/203 (42%), Gaps = 49/203 (24%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK---SGDNF-CTACNCNPIGSLNLQCNS----EGRC 75
G CL C +R G +C +C D YY++ G +F C C C+ G N+ G+C
Sbjct: 1022 GECLKCLYNRGGDDCSECADGYYEQPNADGTDFTCVPCGCDERGGDPFIGNTCDKKTGQC 1081
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGS--VKNTPNCDSVKGQCESAQ 129
C V G C C N +D A GC++C C+P S + CD V GQC
Sbjct: 1082 ACLDKVEGRTCSSCRNNFFDLVNAVENGGCQACGCDPENSEDISGEQPCDMVTGQC---- 1137
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PLGH---------GGSLNLQ 177
+ + F G R D + C++ Y +G G
Sbjct: 1138 -------------RCKPGF---GGR--DCKSCEQGYYGDPKIGKCEACDCDPSGVHDPFA 1179
Query: 178 CNS-EGRCQCKPGVTGDKCDRCD 199
CN+ G+C+CKPG+ G CDRC+
Sbjct: 1180 CNAWTGQCECKPGIGGQHCDRCE 1202
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 100/245 (40%), Gaps = 53/245 (21%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL--QCNSE-GRCQCKP 79
GG C +C+ G C +C ++ S C C+CN G++N C + G+CQC
Sbjct: 800 GGQC-ECREGVTGRTCNQCAAGFFGFSHTG-CQMCDCNRRGTVNQGQFCEQQSGQCQCLE 857
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR---- 135
GV G +CDRC YDF CK CECN + CDSV G+C S + G
Sbjct: 858 GVGGRQCDRCLPGFYDF--PNCKKCECNGHAN-----ECDSVSGECLSCAHDTTGANCER 910
Query: 136 ----VHTELRVQSRKNFD---------PAGNRIWD----LRRCK----RDTYPLGHGGSL 174
+ + S N P NR + L R + R+ G S+
Sbjct: 911 CADGYYGD--PTSVTNIQCTPCPCPDGPKSNRQFADTCGLSRMRGSSSREDDARGPRPSM 968
Query: 175 NLQCNSEGRCQCKPGVTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVKNTPNCDS 229
+ C C PG G +CD+C H+ FG C CECN + CD+
Sbjct: 969 VM-------CNCNPGYQGLQCDQCAPGHFGNPMEPFG--SCNPCECNGNIDTSDPDACDA 1019
Query: 230 VKGQC 234
G+C
Sbjct: 1020 RTGEC 1024
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 68/181 (37%), Gaps = 45/181 (24%)
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
GV CD + + G KSCEC+ GS+ + CD GQCE + GR
Sbjct: 760 GVIEKDCDAMTYSISSWFHQGAKSCECDQTGSISRS--CDPSGGQCECRE-GVTGRT--- 813
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------------SEGRCQC 186
+C + H G CN G+CQC
Sbjct: 814 ------------------CNQCAAGFFGFSHTGCQMCDCNRRGTVNQGQFCEQQSGQCQC 855
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
GV G +CDRC YDF CK CECN + CDSV G+C C + GA C
Sbjct: 856 LEGVGGRQCDRCLPGFYDF--PNCKKCECNGHAN-----ECDSVSGECLSCAHDTTGANC 908
Query: 246 R 246
Sbjct: 909 E 909
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C+CKPG G C C+ +Y + G C++C+C+P+G V + C++ GQCECK +
Sbjct: 1135 GQCRCKPGFGGRDCKSCEQGYYGDPKIGKCEACDCDPSG-VHDPFACNAWTGQCECKPGI 1193
Query: 241 EGAQC 245
G C
Sbjct: 1194 GGQHC 1198
>gi|71991183|ref|NP_001023282.1| Protein EPI-1, isoform b [Caenorhabditis elegans]
gi|2497610|sp|Q21313.1|EPI1_CAEEL RecName: Full=Laminin-like protein epi-1; Flags: Precursor
gi|3878396|emb|CAA94293.1| Protein EPI-1, isoform b [Caenorhabditis elegans]
Length = 3672
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C G+ G C+KC +Y C C C G+ C+S G+C CK G++CDR
Sbjct: 631 CNGNFTGRTCDKCAAGFYNYPD---CRGCECLLSGAKGQTCDSNGQCYCKGNFEGERCDR 687
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C N Y+F C+ C CNP+G ++ CD V G+ S + GR+
Sbjct: 688 CKPNFYNF--PICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRI----------- 734
Query: 148 FDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
D WDL+ D G LN G+C CK G +CD+C
Sbjct: 735 CDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRCDQCADG 794
Query: 202 HY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y + + GC+SC C+ G+++ CD GQC+C+ V G +C
Sbjct: 795 FYRLNSYNQMGCESCHCDIGGALR--AECDITSGQCKCRPRVTGLRC 839
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 113/259 (43%), Gaps = 35/259 (13%)
Query: 1 CNCNGFSNRCFFDKEL-YNRTGH--------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC G SN C +D E+ N+ GG C +C+ + +G NC KC Y++ G
Sbjct: 357 CNCFGRSNECEYDAEVDLNKQSIDSQGNYEGGGVCKNCRENTEGVNCNKCSFGYFRPEGV 416
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+C+P G+C+C P G+ CD+C +YD CK CEC
Sbjct: 417 TWNEPQPCKVCDCDPDKHTGACAEETGKCECLPRFVGEDCDQCASGYYD--APKCKPCEC 474
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
N G++ + C GQC + G E N AG C D
Sbjct: 475 NVNGTIGDV--CLPEDGQCPCK--AGFGGTFCETCADGYTNVT-AG-----CVECVCDAT 524
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
HG S G+C+CKP G CD+C V + FG+ CK C C+P G+
Sbjct: 525 GSEHGNC----SASTGQCECKPAYAGLSCDKCQVGY--FGD-DCKFCNCDPMGTEGGV-- 575
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC CK+ G +C
Sbjct: 576 CDQTTGQCLCKEGFAGDKC 594
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 99/200 (49%), Gaps = 35/200 (17%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+C+C GS + QC G +C+CKPGV G +C+RC +Y+F E C C+CN AG
Sbjct: 1414 SCDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYNFPE--CIKCQCN-AGQ--- 1467
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELR-----VQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
CD GQC H E + V + +DP L C++ +P
Sbjct: 1468 --QCDERTGQCFCPP-------HVEGQTCDRCVSNAFGYDP-------LIGCQKCGCHPQ 1511
Query: 169 GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G G NL C+ E G+C C+ + G +CDRC Y F C C CN AG+ + C
Sbjct: 1512 GSEGG-NLVCDPESGQCLCRESMGGRQCDRCLAGFYGFPH--CYGCSCNRAGTTEEI--C 1566
Query: 228 DSVKGQCECKDNVEGAQCRS 247
D+ QC+CK+NV G +C +
Sbjct: 1567 DATNAQCKCKENVYGGRCEA 1586
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 91/199 (45%), Gaps = 51/199 (25%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQ----CNSEGRCQCKPGV 81
C+G+ +G C++C+ N+Y NF C CNCNP G + + Q + C C+ V
Sbjct: 676 CKGNFEGERCDRCKPNFY-----NFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHV 730
Query: 82 TGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TG CD+C +D E GC+SC+CN G++ CD GQC
Sbjct: 731 TGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQC------------- 777
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-------------GGSLNLQCN-SEGRC 184
+KN D G R +C Y L GG+L +C+ + G+C
Sbjct: 778 ----MCKKNAD--GRR---CDQCADGFYRLNSYNQMGCESCHCDIGGALRAECDITSGQC 828
Query: 185 QCKPGVTGDKCDRCDVNHY 203
+C+P VTG +CD+ NHY
Sbjct: 829 KCRPRVTGLRCDQPIENHY 847
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 112/282 (39%), Gaps = 80/282 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS----------- 49
C CNG S C D G C DC+ + +G +CE C + +Y +
Sbjct: 1830 CECNGHSATCDPDT---------GICTDCEHNTNGDHCEFCNEGHYGNATNGSPYDCMAC 1880
Query: 50 ------GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCD---VNHYDFGEAG 100
+NF +C+ + G L LQCN CKPG TGD+CDRC H
Sbjct: 1881 ACPFAPTNNFAKSCDVSEEGQL-LQCN------CKPGYTGDRCDRCASGFFGHPQISGES 1933
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C C+CN ++ ++ +C G C + ++ GR H E
Sbjct: 1934 CSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGR-HCE--------------------S 1972
Query: 161 CKRDTYPLGHGGSLNL---------QCNSE------GRCQCKPGVTGDKCDRCDVNHYDF 205
C Y G ++ QC S+ G C+CK V GD CDRC +H+ F
Sbjct: 1973 CAAWFY----GDAVTAKNCSSCECSQCGSQYCDNKSGGCECKINVEGDSCDRCKPDHWGF 2028
Query: 206 GE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ GC+ C C G+ C+ GQC C+ G +C
Sbjct: 2029 SKCQGCQGCHC---GTAAFNTQCNVENGQCTCRPGATGMRCE 2067
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 107/239 (44%), Gaps = 48/239 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ G C++C +Y G C AC C+ G + +C+ + G+C C T
Sbjct: 581 GQCL-CKEGFAGDKCDRCDIAFY---GYPNCKACACDGAGITSPECDATSGQCPCNGNFT 636
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C Y++ + C+ CEC +G+ T CDS GQC
Sbjct: 637 GRTCDKCAAGFYNYPD--CRGCECLLSGAKGQT--CDS-NGQC----------------- 674
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTY--PL-------GHGGSLNLQ----CNSEGRCQCKPG 189
+ NF+ G R RCK + Y P+ G + + Q + C C+
Sbjct: 675 YCKGNFE--GER---CDRCKPNFYNFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKH 729
Query: 190 VTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG CD+C +D E GC+SC+CN G++ CD GQC CK N +G +C
Sbjct: 730 VTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRC 788
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C+ + +G +C++C+ +++ S C C+C + N QCN E G+C C+PG TG +C
Sbjct: 2008 ECKINVEGDSCDRCKPDHWGFSKCQGCQGCHCG-TAAFNTQCNVENGQCTCRPGATGMRC 2066
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ C+ ++++GE GC C+C S+ CD GQC
Sbjct: 2067 EHCEHGYWNYGEHGCDKCDCEADLSMGTV--CDVRTGQC 2103
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
+ N QCN E G+C C+PG TG +C+ C+ ++++GE GC C+C S+ CD
Sbjct: 2042 AAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTV--CDVR 2099
Query: 231 KGQCECKDNVEGAQC 245
GQC C++ G++C
Sbjct: 2100 TGQCHCQEGATGSRC 2114
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 45/207 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G C C+ + DG +CE C +Y GD C++C C+ GS N G C+CK
Sbjct: 1956 GDCYLCEQNTDGRHCESCAAWFY---GDAVTAKNCSSCECSQCGSQYCD-NKSGGCECKI 2011
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V GD CDRC +H+ F + GC+ C C G+ C+ GQC ++ R
Sbjct: 2012 NVEGDSCDRCKPDHWGFSKCQGCQGCHC---GTAAFNTQCNVENGQCTCRPGATGMRC-- 2066
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSE-GRCQCK 187
C+ + G G S+ C+ G+C C+
Sbjct: 2067 --------------------EHCEHGYWNYGEHGCDKCDCEADLSMGTVCDVRTGQCHCQ 2106
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G TG +CD+C ++ GC+ C+
Sbjct: 2107 EGATGSRCDQCLPSYLRIPTYGCRRCD 2133
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPG 80
G C+ C+ + DG C++C D +Y+ + N C +C+C+ G+L +C+ + G+C+C+P
Sbjct: 775 GQCM-CKKNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALRAECDITSGQCKCRPR 833
Query: 81 VTGDKCDRCDVNHY 94
VTG +CD+ NHY
Sbjct: 834 VTGLRCDQPIENHY 847
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 81/210 (38%), Gaps = 48/210 (22%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCK 78
+GG C C+ G CE+C YY NF C C CN QC+ G+C C
Sbjct: 1430 YGGQC-KCKPGVIGRRCERCAPGYY-----NFPECIKCQCNA----GQQCDERTGQCFCP 1479
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CDRC N + + GC+ C C+P GS CD GQC +
Sbjct: 1480 PHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRE-------- 1531
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH--------GGSLNLQCNSE-GRCQCKP 188
G R D RC Y H G+ C++ +C+CK
Sbjct: 1532 ------------SMGGRQCD--RCLAGFYGFPHCYGCSCNRAGTTEEICDATNAQCKCKE 1577
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
V G +C+ C +D GC +C C
Sbjct: 1578 NVYGGRCEACKAGTFDLSAENPLGCVNCFC 1607
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCN---PIGSLNLQCNSEGRCQCK 78
G C+ G C++C+ ++ Q ++ C +C+CN I LN G+C CK
Sbjct: 721 GELCSCRKHVTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCK 780
Query: 79 PGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G +CD+C Y + + GC+SC C+ G+++ CD GQC+
Sbjct: 781 KNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALR--AECDITSGQCK 829
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 84/232 (36%), Gaps = 71/232 (30%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVTG 83
C GP+C+ C Y++ +F C C CN + C+ + G C C+ G
Sbjct: 1799 CPAPYTGPSCQLCASGYHRVQSGSFLGACVPCECN---GHSATCDPDTGICTDCEHNTNG 1855
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
D C+ C+ HY G C +C C A + +CD +S G++
Sbjct: 1856 DHCEFCNEGHYGNATNGSPYDCMACACPFAPTNNFAKSCD----------VSEEGQL--- 1902
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
LQCN CKPG TGD+CDRC
Sbjct: 1903 ------------------------------------LQCN------CKPGYTGDRCDRCA 1920
Query: 200 ---VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQCRS 247
H C C+CN ++ ++ +C G C C+ N +G C S
Sbjct: 1921 SGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCES 1972
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ G CE C Y+ G++ C C+C S+ C+ G+C C+ G TG +CD
Sbjct: 2057 CRPGATGMRCEHCEHGYWNY-GEHGCDKCDCEADLSMGTVCDVRTGQCHCQEGATGSRCD 2115
Query: 88 RCDVNHYDFGEAGCKSC-EC--NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
+C ++ GC+ C EC + G V N V G A +SS V L ++
Sbjct: 2116 QCLPSYLRIPTYGCRRCDECVHHLIGDVDNLELEIDVLGTA-IANISSATIVGARL-ARN 2173
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+K F+ N I + + +++ G + ++ NS
Sbjct: 2174 KKEFNDI-NEITKMLNDEENSFGNVFGDAQDILTNS 2208
>gi|392900546|ref|NP_001255501.1| Protein EPI-1, isoform d [Caenorhabditis elegans]
gi|225877997|emb|CAX65068.1| Protein EPI-1, isoform d [Caenorhabditis elegans]
Length = 3663
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C G+ G C+KC +Y C C C G+ C+S G+C CK G++CDR
Sbjct: 631 CNGNFTGRTCDKCAAGFYNYPD---CRGCECLLSGAKGQTCDSNGQCYCKGNFEGERCDR 687
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C N Y+F C+ C CNP+G ++ CD V G+ S + GR+
Sbjct: 688 CKPNFYNF--PICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRI----------- 734
Query: 148 FDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
D WDL+ D G LN G+C CK G +CD+C
Sbjct: 735 CDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRCDQCADG 794
Query: 202 HY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y + + GC+SC C+ G+++ CD GQC+C+ V G +C
Sbjct: 795 FYRLNSYNQMGCESCHCDIGGALR--AECDITSGQCKCRPRVTGLRC 839
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 113/259 (43%), Gaps = 35/259 (13%)
Query: 1 CNCNGFSNRCFFDKEL-YNRTGH--------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC G SN C +D E+ N+ GG C +C+ + +G NC KC Y++ G
Sbjct: 357 CNCFGRSNECEYDAEVDLNKQSIDSQGNYEGGGVCKNCRENTEGVNCNKCSFGYFRPEGV 416
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+C+P G+C+C P G+ CD+C +YD CK CEC
Sbjct: 417 TWNEPQPCKVCDCDPDKHTGACAEETGKCECLPRFVGEDCDQCASGYYD--APKCKPCEC 474
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
N G++ + C GQC + G E N AG C D
Sbjct: 475 NVNGTIGDV--CLPEDGQCPCK--AGFGGTFCETCADGYTNVT-AG-----CVECVCDAT 524
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
HG S G+C+CKP G CD+C V + FG+ CK C C+P G+
Sbjct: 525 GSEHGNC----SASTGQCECKPAYAGLSCDKCQVGY--FGD-DCKFCNCDPMGTEGGV-- 575
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC CK+ G +C
Sbjct: 576 CDQTTGQCLCKEGFAGDKC 594
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 99/200 (49%), Gaps = 35/200 (17%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+C+C GS + QC G +C+CKPGV G +C+RC +Y+F E C C+CN AG
Sbjct: 1405 SCDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYNFPE--CIKCQCN-AGQ--- 1458
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELR-----VQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
CD GQC H E + V + +DP L C++ +P
Sbjct: 1459 --QCDERTGQCFCPP-------HVEGQTCDRCVSNAFGYDP-------LIGCQKCGCHPQ 1502
Query: 169 GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G G NL C+ E G+C C+ + G +CDRC Y F C C CN AG+ + C
Sbjct: 1503 GSEGG-NLVCDPESGQCLCRESMGGRQCDRCLAGFYGFPH--CYGCSCNRAGTTEEI--C 1557
Query: 228 DSVKGQCECKDNVEGAQCRS 247
D+ QC+CK+NV G +C +
Sbjct: 1558 DATNAQCKCKENVYGGRCEA 1577
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 91/199 (45%), Gaps = 51/199 (25%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQ----CNSEGRCQCKPGV 81
C+G+ +G C++C+ N+Y NF C CNCNP G + + Q + C C+ V
Sbjct: 676 CKGNFEGERCDRCKPNFY-----NFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHV 730
Query: 82 TGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TG CD+C +D E GC+SC+CN G++ CD GQC
Sbjct: 731 TGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQC------------- 777
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-------------GGSLNLQCN-SEGRC 184
+KN D G R +C Y L GG+L +C+ + G+C
Sbjct: 778 ----MCKKNAD--GRR---CDQCADGFYRLNSYNQMGCESCHCDIGGALRAECDITSGQC 828
Query: 185 QCKPGVTGDKCDRCDVNHY 203
+C+P VTG +CD+ NHY
Sbjct: 829 KCRPRVTGLRCDQPIENHY 847
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 112/282 (39%), Gaps = 80/282 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS----------- 49
C CNG S C D G C DC+ + +G +CE C + +Y +
Sbjct: 1821 CECNGHSATCDPDT---------GICTDCEHNTNGDHCEFCNEGHYGNATNGSPYDCMAC 1871
Query: 50 ------GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCD---VNHYDFGEAG 100
+NF +C+ + G L LQCN CKPG TGD+CDRC H
Sbjct: 1872 ACPFAPTNNFAKSCDVSEEGQL-LQCN------CKPGYTGDRCDRCASGFFGHPQISGES 1924
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C C+CN ++ ++ +C G C + ++ GR H E
Sbjct: 1925 CSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGR-HCE--------------------S 1963
Query: 161 CKRDTYPLGHGGSLNL---------QCNSE------GRCQCKPGVTGDKCDRCDVNHYDF 205
C Y G ++ QC S+ G C+CK V GD CDRC +H+ F
Sbjct: 1964 CAAWFY----GDAVTAKNCSSCECSQCGSQYCDNKSGGCECKINVEGDSCDRCKPDHWGF 2019
Query: 206 GE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ GC+ C C G+ C+ GQC C+ G +C
Sbjct: 2020 SKCQGCQGCHC---GTAAFNTQCNVENGQCTCRPGATGMRCE 2058
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 107/239 (44%), Gaps = 48/239 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ G C++C +Y G C AC C+ G + +C+ + G+C C T
Sbjct: 581 GQCL-CKEGFAGDKCDRCDIAFY---GYPNCKACACDGAGITSPECDATSGQCPCNGNFT 636
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C Y++ + C+ CEC +G+ T CDS GQC
Sbjct: 637 GRTCDKCAAGFYNYPD--CRGCECLLSGAKGQT--CDS-NGQC----------------- 674
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTY--PL-------GHGGSLNLQ----CNSEGRCQCKPG 189
+ NF+ G R RCK + Y P+ G + + Q + C C+
Sbjct: 675 YCKGNFE--GER---CDRCKPNFYNFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKH 729
Query: 190 VTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG CD+C +D E GC+SC+CN G++ CD GQC CK N +G +C
Sbjct: 730 VTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRC 788
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C+ + +G +C++C+ +++ S C C+C + N QCN E G+C C+PG TG +C
Sbjct: 1999 ECKINVEGDSCDRCKPDHWGFSKCQGCQGCHCG-TAAFNTQCNVENGQCTCRPGATGMRC 2057
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ C+ ++++GE GC C+C S+ CD GQC
Sbjct: 2058 EHCEHGYWNYGEHGCDKCDCEADLSMGTV--CDVRTGQC 2094
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
+ N QCN E G+C C+PG TG +C+ C+ ++++GE GC C+C S+ CD
Sbjct: 2033 AAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTV--CDVR 2090
Query: 231 KGQCECKDNVEGAQC 245
GQC C++ G++C
Sbjct: 2091 TGQCHCQEGATGSRC 2105
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 45/207 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G C C+ + DG +CE C +Y GD C++C C+ GS N G C+CK
Sbjct: 1947 GDCYLCEQNTDGRHCESCAAWFY---GDAVTAKNCSSCECSQCGSQYCD-NKSGGCECKI 2002
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V GD CDRC +H+ F + GC+ C C G+ C+ GQC ++ R
Sbjct: 2003 NVEGDSCDRCKPDHWGFSKCQGCQGCHC---GTAAFNTQCNVENGQCTCRPGATGMRC-- 2057
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSE-GRCQCK 187
C+ + G G S+ C+ G+C C+
Sbjct: 2058 --------------------EHCEHGYWNYGEHGCDKCDCEADLSMGTVCDVRTGQCHCQ 2097
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G TG +CD+C ++ GC+ C+
Sbjct: 2098 EGATGSRCDQCLPSYLRIPTYGCRRCD 2124
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPG 80
G C+ C+ + DG C++C D +Y+ + N C +C+C+ G+L +C+ + G+C+C+P
Sbjct: 775 GQCM-CKKNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALRAECDITSGQCKCRPR 833
Query: 81 VTGDKCDRCDVNHY 94
VTG +CD+ NHY
Sbjct: 834 VTGLRCDQPIENHY 847
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 81/210 (38%), Gaps = 48/210 (22%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCK 78
+GG C C+ G CE+C YY NF C C CN QC+ G+C C
Sbjct: 1421 YGGQC-KCKPGVIGRRCERCAPGYY-----NFPECIKCQCNA----GQQCDERTGQCFCP 1470
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CDRC N + + GC+ C C+P GS CD GQC +
Sbjct: 1471 PHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRE-------- 1522
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH--------GGSLNLQCNSE-GRCQCKP 188
G R D RC Y H G+ C++ +C+CK
Sbjct: 1523 ------------SMGGRQCD--RCLAGFYGFPHCYGCSCNRAGTTEEICDATNAQCKCKE 1568
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
V G +C+ C +D GC +C C
Sbjct: 1569 NVYGGRCEACKAGTFDLSAENPLGCVNCFC 1598
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCN---PIGSLNLQCNSEGRCQCK 78
G C+ G C++C+ ++ Q ++ C +C+CN I LN G+C CK
Sbjct: 721 GELCSCRKHVTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCK 780
Query: 79 PGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G +CD+C Y + + GC+SC C+ G+++ CD GQC+
Sbjct: 781 KNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALR--AECDITSGQCK 829
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 84/232 (36%), Gaps = 71/232 (30%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVTG 83
C GP+C+ C Y++ +F C C CN + C+ + G C C+ G
Sbjct: 1790 CPAPYTGPSCQLCASGYHRVQSGSFLGACVPCECN---GHSATCDPDTGICTDCEHNTNG 1846
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
D C+ C+ HY G C +C C A + +CD +S G++
Sbjct: 1847 DHCEFCNEGHYGNATNGSPYDCMACACPFAPTNNFAKSCD----------VSEEGQL--- 1893
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
LQCN CKPG TGD+CDRC
Sbjct: 1894 ------------------------------------LQCN------CKPGYTGDRCDRCA 1911
Query: 200 ---VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQCRS 247
H C C+CN ++ ++ +C G C C+ N +G C S
Sbjct: 1912 SGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCES 1963
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ G CE C Y+ G++ C C+C S+ C+ G+C C+ G TG +CD
Sbjct: 2048 CRPGATGMRCEHCEHGYWNY-GEHGCDKCDCEADLSMGTVCDVRTGQCHCQEGATGSRCD 2106
Query: 88 RCDVNHYDFGEAGCKSC-EC--NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
+C ++ GC+ C EC + G V N V G A +SS V L ++
Sbjct: 2107 QCLPSYLRIPTYGCRRCDECVHHLIGDVDNLELEIDVLGTA-IANISSATIVGARL-ARN 2164
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+K F+ N I + + +++ G + ++ NS
Sbjct: 2165 KKEFNDI-NEITKMLNDEENSFGNVFGDAQDILTNS 2199
>gi|348500775|ref|XP_003437948.1| PREDICTED: laminin subunit alpha-3 [Oreochromis niloticus]
Length = 3244
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 108/259 (41%), Gaps = 62/259 (23%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
C C + C++D E+ + R GG C++CQ + G NCE+C + +Y+ G
Sbjct: 346 CQCFSHAFDCYYDPEVEKRGTSLDTFGRFDGGGVCINCQHNTAGVNCERCIEGFYRPYGV 405
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C C+ + + S GRC CKP G+ CDRC HY + + C
Sbjct: 406 PTESPTGCIPCRCDERTTAGCEMGS-GRCICKPQFAGENCDRCADGHYYYPD--CFRYPV 462
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
PA + PAG + ++ C D
Sbjct: 463 YPATTKS------------------------------------PAGPIVGKIKPCICD-- 484
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
+ G+L+ C++ GRC C+ V G++CDRC ++ F C++C C+ GS T
Sbjct: 485 ---YRGTLDGICDALGRCLCQQSVEGERCDRCRPGYHSF--PNCRACRCSQEGSYDAT-- 537
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD + GQC C V G C
Sbjct: 538 CDPLSGQCLCLPGVVGQLC 556
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 88/192 (45%), Gaps = 25/192 (13%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C+C+ GS + C++ G +C C+P V G +C +C + FG C+ C+C
Sbjct: 1287 CDCDASGSTGIVCDAVGGQCPCRPHVIGRQCTKCATGY--FGFPYCRPCDCG-------R 1337
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSL 174
CD V G+C + V V + F L C+ + P G +
Sbjct: 1338 RLCDEVTGRC----ICPPQTVRPACDVCQNQTFS-----YHPLLGCENCECSPSGIAANA 1388
Query: 175 NLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
QC+ + G+C CKP + G KCDRC +Y F + C C+CN G N CD G+
Sbjct: 1389 GAQCDRNTGQCSCKPRIGGRKCDRCAPGYYRFPD--CVPCDCNQGGVTSNV--CDPDTGR 1444
Query: 234 CECKDNVEGAQC 245
C CK NV G +C
Sbjct: 1445 CLCKRNVAGVRC 1456
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 83/201 (41%), Gaps = 35/201 (17%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
C C+ G+L+ C++ GRC C+ V G++CDRC ++ F C++C C+ GS T
Sbjct: 481 CICDYRGTLDGICDALGRCLCQQSVEGERCDRCRPGYHSF--PNCRACRCSQEGSYDAT- 537
Query: 117 NCDSVKGQC-----ESAQLSSR--GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
CD + GQC QL R V S + AG D R
Sbjct: 538 -CDPLSGQCLCLPGVVGQLCDRCASGVRFPQCSASISVCNTAGTEASDPR---------- 586
Query: 170 HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPN 226
G C+C V G CDRC +++ GC C C+ G++
Sbjct: 587 -----------TGSCRCLANVEGTLCDRCKPLYWNLAVDNPRGCIECHCDLKGTLSGVGE 635
Query: 227 CDSVKGQCECKDNVEGAQCRS 247
C+ GQC CK N G C S
Sbjct: 636 CEQKSGQCHCKPNTCGHACDS 656
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S+ C +RTG CL+C+ + G CE+C+D YY + C AC C
Sbjct: 1709 CECNGLSDEC------EDRTGR---CLNCRYNTAGDRCERCKDGYYGDAALRTCRACPCP 1759
Query: 61 --------PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
+G + N E C C+ G G KC+RC +Y G+ C P
Sbjct: 1760 FTTSTQNFAVGCREVYGNIE--CICRAGYAGSKCERCAPGYY--GDPLIPGGSCRPCNCA 1815
Query: 113 KNTPNCDSVKGQCESA 128
N +CD G C++A
Sbjct: 1816 GNGNSCDPRTGVCKNA 1831
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL CQ +G C++CR Y+ C AC C+ GS + C+ G+C C PGV
Sbjct: 497 GRCL-CQQSVEGERCDRCRPGYHSFPN---CRACRCSQEGSYDATCDPLSGQCLCLPGVV 552
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
G CDRC + F + CN AG+ + P S
Sbjct: 553 GQLCDRC-ASGVRFPQCSASISVCNTAGTEASDPRTGS 589
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIG---SLNLQCN-SEGRCQCKPGVTGDKCDRCDV 91
P C+ C++ + C C C+P G + QC+ + G+C CKP + G KCDRC
Sbjct: 1356 PACDVCQNQTFSYHPLLGCENCECSPSGIAANAGAQCDRNTGQCSCKPRIGGRKCDRCAP 1415
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+Y F + C C+CN G N CD G+C
Sbjct: 1416 GYYRFPD--CVPCDCNQGGVTSNV--CDPDTGRC 1445
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 80/207 (38%), Gaps = 44/207 (21%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ G C KC Y+ G +C C+C L GRC C P
Sbjct: 1303 GGQC-PCRPHVIGRQCTKCATGYF---GFPYCRPCDCG----RRLCDEVTGRCICPPQTV 1354
Query: 83 GDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTEL 140
CD C + + GC++CEC+P+G N CD GQC S + R+
Sbjct: 1355 RPACDVCQNQTFSYHPLLGCENCECSPSGIAANAGAQCDRNTGQC-----SCKPRI---- 1405
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPL--------GHGGSLNLQCNSE-GRCQCKPGVT 191
G R D RC Y GG + C+ + GRC CK V
Sbjct: 1406 -----------GGRKCD--RCAPGYYRFPDCVPCDCNQGGVTSNVCDPDTGRCLCKRNVA 1452
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCEC 215
G +CD C + F + GC SC C
Sbjct: 1453 GVRCDTCRERSFYFDPSNPLGCTSCFC 1479
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CKP G CD C ++ + GC+ C+C+ G++ C+ + GQC+C+
Sbjct: 641 GQCHCKPNTCGHACDSCKDGYFLLQKKNYYGCQGCQCDIGGAIGTA--CNDISGQCQCRK 698
Query: 239 NVEGAQC 245
N+ G +C
Sbjct: 699 NIIGRKC 705
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQC-NSEGRCQ-CKPGVTG 83
C G +CEKC+ YY+ F C C CN L+ +C + GRC C+ G
Sbjct: 1678 CPSQYTGDSCEKCQPGYYRDGSSPFLGLCVPCECN---GLSDECEDRTGRCLNCRYNTAG 1734
Query: 84 DKCDRCDVNHY-DFGEAGCKSCECNPAGSVKN-TPNCDSVKGQCE 126
D+C+RC +Y D C++C C S +N C V G E
Sbjct: 1735 DRCERCKDGYYGDAALRTCRACPCPFTTSTQNFAVGCREVYGNIE 1779
>gi|8515086|gb|AAF75819.1| Usher syndrome type IIa protein [Homo sapiens]
Length = 1546
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + N+Y + ++F C CNC+ G++N L CN S G+C CK
Sbjct: 813 GQCI-CKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCNKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 34/233 (14%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ + G C+ C + + D C C CN GS+N CN G+C+CK G +
Sbjct: 717 CKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y CK+C+C+ AGS+ T C++ GQC + V+ R
Sbjct: 777 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQCIC-----------KPNVEGR 824
Query: 146 K-------NFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKC 195
+ NF N + C D G++N L CN S G+C CK GVTG +C
Sbjct: 825 QCNKCLEGNFYLRQNNSFLCLPCNCD-----KTGTINGSLLCNKSTGQCPCKLGVTGLRC 879
Query: 196 DRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C+ + Y+ C+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 880 NQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 931
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ G+V + C+S+ GQC S G+ + +
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHI--CNSLTGQCVCQDASIAGQRCDQCK- 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK V+G +C++C Y+ E GC C CN +G+V C GQC+CK
Sbjct: 660 GQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQNSGQCKCKA 719
Query: 239 NVEGAQC 245
NV G +C
Sbjct: 720 NVIGLRC 726
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++C+D+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCVCQDASIAGQRCDQCKDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1026 FVTGSKCDACVPSASHLD 1043
>gi|345329548|ref|XP_003431393.1| PREDICTED: usherin [Ornithorhynchus anatinus]
Length = 5043
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 124/264 (46%), Gaps = 31/264 (11%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-- 52
C C S RC ++ E +NR G GG C +CQ + G NCE C+D ++ G N
Sbjct: 575 CQCYNHSRRCHYNITMDPFPEEHNR-GGGGVCENCQHNTTGRNCELCKDYLFRPVGANPS 633
Query: 53 ---FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
C C+C+ G+ N L C G +C CK V+G +C+ C Y+ + GC
Sbjct: 634 ARDVCKPCDCDETGTRNSSLLCEKIGGQCNCKRHVSGRQCNHCQDGFYNLQRSDPDGCSP 693
Query: 104 CECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
C+CN +G+V C GQC+ A + + ++F+ G + C+
Sbjct: 694 CKCNISGTVNGDITCHQNSGQCKCKANVIGLKCNRCNFGFKVLRSFNEEGCVL-----CQ 748
Query: 163 RDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+ GS + CN G+C+C+ G +CD C N Y AGCK+CEC+ GS+
Sbjct: 749 CHIH-----GSASPFCNPHSGQCKCRKDTQGLQCDTCIENFYGLDGAGCKACECDVDGSL 803
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
T C + GQC CK N G +C
Sbjct: 804 PGT-VCSAETGQCTCKPNFGGRRC 826
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 49/241 (20%)
Query: 29 CQGDRDGPNCEKCRDNY--YQKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCKPGVTG 83
C+ + G C +C D Y Q++ ++C C+C+ G++N C+ S G+C CKPG TG
Sbjct: 817 CKPNFGGRRCSECLDGYSHLQQNSSSWCQPCDCDKAGTVNGSFLCDKSTGQCPCKPGSTG 876
Query: 84 DKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
C++C + Y+ +GC++C+C+ G+ CD + GQC L +R
Sbjct: 877 LHCNQCAPHWYNLTLNNPSGCQTCDCDSLGTSAGM-VCDQMSGQCPC--LPTR------- 926
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGH------------GGSLNLQCNSE-GRCQCK 187
Q R+ +CK Y H GS++ CNS+ +C CK
Sbjct: 927 --QGRR-----------CNQCKSGFYISSHTTTGCLPCSCHPTGSVHGVCNSQTSQCICK 973
Query: 188 -PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
V+G +CD+C +++ F C+ C C+ AGS+ T C S+ GQC CK V G +
Sbjct: 974 DASVSGWRCDQCKDHYFGFDSLAGRCQPCSCHLAGSLNRT--CHSLTGQCFCKLFVTGIK 1031
Query: 245 C 245
C
Sbjct: 1032 C 1032
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 117/236 (49%), Gaps = 28/236 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCNS-EGRCQC 77
GG C +C+ G C C+D +Y Q+S + C+ C CN G++N + C+ G+C+C
Sbjct: 659 GGQC-NCKRHVSGRQCNHCQDGFYNLQRSDPDGCSPCKCNISGTVNGDITCHQNSGQCKC 717
Query: 78 KPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G KC+RC+ F E GC C+C+ GS +P C+ GQC+ + ++G
Sbjct: 718 KANVIGLKCNRCNFGFKVLRSFNEEGCVLCQCHIHGSA--SPFCNPHSGQCKCRK-DTQG 774
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL-NLQCNSE-GRCQCKPGVTG 192
+ + +++ D AG + C+ D GSL C++E G+C CKP G
Sbjct: 775 -LQCDTCIENFYGLDGAG-----CKACECDV-----DGSLPGTVCSAETGQCTCKPNFGG 823
Query: 193 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C + + + C+ C+C+ AG+V + CD GQC CK G C
Sbjct: 824 RRCSECLDGYSHLQQNSSSWCQPCDCDKAGTVNGSFLCDKSTGQCPCKPGSTGLHC 879
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 48/218 (22%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQCNS-EGRCQCKPGVTGD 84
C+ G +C +C ++Y + +N C C+C+ +G S + C+ G+C C P G
Sbjct: 870 CKPGSTGLHCNQCAPHWYNLTLNNPSGCQTCDCDSLGTSAGMVCDQMSGQCPCLPTRQGR 929
Query: 85 KCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+P GSV C+S QC S G
Sbjct: 930 RCNQCKSGFYISSHTTTGCLPCSCHPTGSVHGV--CNSQTSQCICKDASVSG-------- 979
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGH------------GGSLNLQCNS-EGRCQCKPG 189
W +CK + GSLN C+S G+C CK
Sbjct: 980 -------------WRCDQCKDHYFGFDSLAGRCQPCSCHLAGSLNRTCHSLTGQCFCKLF 1026
Query: 190 VTGDKCDRCD--VNHYD----FGEAGCKSCECNPAGSV 221
VTG KCD C +H D FG + S + P G V
Sbjct: 1027 VTGIKCDTCIHGASHLDIHNQFGCSKTPSQQPPPRGQV 1064
>gi|344271443|ref|XP_003407548.1| PREDICTED: LOW QUALITY PROTEIN: multiple epidermal growth
factor-like domains protein 9-like [Loxodonta africana]
Length = 583
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 108/229 (47%), Gaps = 26/229 (11%)
Query: 28 DCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDK 85
+C G CE C++ +Y C C+C+P G++++ CNS G+CQCK GVTG
Sbjct: 204 ECHPGYQGLRCETCKEGFYLNHTYSSRLCLPCDCSPNGAVSILCNSSGKCQCKVGVTGST 263
Query: 86 CDRCDVNHYDFGEAGCKSCEC-NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
C++C +Y F E GC C C N +GS CD++ G C S Q +S+G H E +
Sbjct: 264 CNQCQDGYYGFSENGCLPCRCSNRSGS------CDALTGACLSCQGNSKGD-HCE---EC 313
Query: 145 RKNFDPAGNRIWDLRRCKRDTYP-----LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
++ F + + RC + G L +C QCK G TG C++C+
Sbjct: 314 KEGFYQRPDATKECLRCPCSAVTSTGNCIIELGELEPKC-----VQCKDGYTGWNCNKCE 368
Query: 200 VNHYDFGEAGCKSCEC-NPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+Y+ ++ C C+C + VK C G+C C N G C
Sbjct: 369 NGYYN-SDSICIKCQCHDHVDPVKTPKICKPESGECINCLHNTTGFWCE 416
>gi|308478231|ref|XP_003101327.1| hypothetical protein CRE_13469 [Caenorhabditis remanei]
gi|308263228|gb|EFP07181.1| hypothetical protein CRE_13469 [Caenorhabditis remanei]
Length = 1815
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 93/229 (40%), Gaps = 64/229 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCKPG 80
G CL C +G CE C D YY + C C CN +G+ + G+C C
Sbjct: 1009 GECLKCLHHTEGAQCEHCVDGYYGDAKLKTCQRCVCNELGTNTTKGACDRVSGQCPCHDN 1068
Query: 81 VTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G +CD+C NH++ AGC++C C+P G V PN
Sbjct: 1069 VIGMQCDQCAENHFNLASGAGCEACGCDPNGVV---PN---------------------- 1103
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
H G +LQCN +G+CQCKPG G KCD+C
Sbjct: 1104 ------------------------------HEGVPHLQCNIFDGQCQCKPGRGGRKCDQC 1133
Query: 199 DVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ ++ GC CECNP GS + C G CEC+ GA C
Sbjct: 1134 EDLYWGDPTTPDGCHRCECNPTGS--KSLQCHRNNGTCECQPGSGGALC 1180
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 106/236 (44%), Gaps = 56/236 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ---KSGDN--F 53
CNCN + RC FD+ +Y +G GG C DC + G NCE+C+ YY+ ++ D+
Sbjct: 348 CNCNRHALRCHFDRAVYEASGFVSGGVCDDCMHNTQGKNCEQCKPFYYRDPRRTIDDPHV 407
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+ GS N C E G+C CK V G++CDRC +++ E G
Sbjct: 408 CLPCECDKAGSQNKGICEGEEDAERGLVAGKCYCKTNVDGNRCDRCKNGYWNLTETNIDG 467
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C +C CN G+ N CD G C T R+ + +N D +
Sbjct: 468 CVACTCNLLGTY-NNEGCDKYTGLC------------TCKRLVTGENCD----------Q 504
Query: 161 CKRDTYPLGH------------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C + Y L GGS + C S G+C+C+ G +G +C+ D + Y
Sbjct: 505 CLPEHYGLSEHVDGCKACDCDIGGSYDNTCEVSTGQCKCREGFSGRRCETADSSFY 560
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N + CNC+ GS++ C+ G +C+CKP V G +C++C + Y FG GCK C+C+ G
Sbjct: 778 NKTSECNCDATGSVSGICSVHGGQCECKPNVVGRRCEQCAIGTYGFGPTGCKKCDCDAVG 837
Query: 111 SVKNTPNCDSVKGQC 125
S+ N +CD GQC
Sbjct: 838 SLGN--DCDKQSGQC 850
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 111/240 (46%), Gaps = 30/240 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP- 79
HGG C +C+ + G CE+C Y G C C+C+ +GSL C+ + G+C C+
Sbjct: 798 HGGQC-ECKPNVVGRRCEQCAIGTY-GFGPTGCKKCDCDAVGSLGNDCDKQSGQCVCREK 855
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G+ G +C++C + F E C++C+CN ++ CD G C + + G H
Sbjct: 856 GIYGRQCNQCQPGFWGFPE--CRTCQCNDHANI-----CDQTSGACIECRDLTTG--HYC 906
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCN----SEGRCQCKPG 189
R Q DP R+ CK T H + L+ + + C CK G
Sbjct: 907 DRCQDGYYGDP---RLGVGIPCKPCPCPGGPTSGYQHADTCYLRNSGNNTQDIVCNCKSG 963
Query: 190 VTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
G++C C NH+ E G C+ C+CN + +CD+ G+C +C + EGAQC
Sbjct: 964 YQGERCGECAQNHWGSPREVGGTCERCDCNGNIDMSMEGSCDAATGECLKCLHHTEGAQC 1023
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 29 CQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKC 86
C+ R G C++C D Y+ + + C C CNP GS +LQC+ + G C+C+PG G C
Sbjct: 1121 CKPGRGGRKCDQCEDLYWGDPTTPDGCHRCECNPTGSKSLQCHRNNGTCECQPGSGGALC 1180
Query: 87 DRC 89
+ C
Sbjct: 1181 NEC 1183
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 175 NLQCNSEGRCQCKPG--------VTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTP 225
N+ + EG C G G +C+ C +Y D C+ C CN G+
Sbjct: 995 NIDMSMEGSCDAATGECLKCLHHTEGAQCEHCVDGYYGDAKLKTCQRCVCNELGTNTTKG 1054
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD V GQC C DNV G QC
Sbjct: 1055 ACDRVSGQCPCHDNVIGMQC 1074
>gi|109112582|ref|XP_001116322.1| PREDICTED: laminin subunit gamma-3-like, partial [Macaca mulatta]
Length = 240
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 90/188 (47%), Gaps = 22/188 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQCNSE---GRCQ 76
GHCL C + G +CE+CR+ +Y + + C C+C+P GS++ Q + G+C
Sbjct: 46 GHCLRCLHNTAGDHCERCREGFYGSALVPRPADKCKPCSCHPQGSVSEQMPCDPVTGQCS 105
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C RC +D GC+SC+C+P GS ++ C GQC R
Sbjct: 106 CLPHVTGRDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQCTC-------R 156
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+ R G I R C+ PLG + + QC+ G C C+PG G KC
Sbjct: 157 PGVTGQACDRCQLGFFGFSIKGCRACR--CSPLG---AASAQCHENGTCICRPGFEGYKC 211
Query: 196 DRCDVNHY 203
DRC N +
Sbjct: 212 DRCHDNFF 219
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 86/197 (43%), Gaps = 34/197 (17%)
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSV 112
NC+P+ L+C GD C+RC Y CK C C+P GSV
Sbjct: 40 NCDPLSGHCLRCLHN--------TAGDHCERCREGFYGSALVPRPADKCKPCSCHPQGSV 91
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLG 169
CD V GQC H R SR FD R R CK +PLG
Sbjct: 92 SEQMPCDPVTGQCSCLP-------HVTGRDCSRCYPGFFDLQPGR--GCRSCK--CHPLG 140
Query: 170 HGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
S QC+ + G+C C+PGVTG CDRC + + F GC++C C+P G+ + C
Sbjct: 141 ---SQEDQCHPKTGQCTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCH 195
Query: 229 SVKGQCECKDNVEGAQC 245
G C C+ EG +C
Sbjct: 196 E-NGTCICRPGFEGYKC 211
>gi|6651382|gb|AAF22284.1|AF172277_3 laminin beta 1 related protein [Homo sapiens]
Length = 761
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 101/220 (45%), Gaps = 36/220 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC---- 54
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 320 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 379
Query: 55 -----TACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 99
AC C+P G+++ + G+C CK V G KCD+C NHY
Sbjct: 380 CIRESPACECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSAT 439
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW 156
GC+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 440 DPLGCQPCDCNPLGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLH 493
Query: 157 DLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 494 GCSPCDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 528
>gi|198417037|ref|XP_002127794.1| PREDICTED: similar to LOC494988 protein [Ciona intestinalis]
Length = 1754
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 95/185 (51%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS-----LNLQCN---SEGRC 75
G C +C + GP+CE+CRD YY D C AC CN +G+ +N QC + G+C
Sbjct: 981 GVCTNCLHNTAGPHCEQCRDYYYGNPLDQNCMACQCNLLGTDSSVCVNGQCQCDATTGQC 1040
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V+G CD+C NH+ GC+SC C+P S+ T C+ + GQC L G
Sbjct: 1041 PCYPNVSGQNCDQCLPNHWKLASGTGCESCGCSPEHSLGTT--CNEITGQC----LCVDG 1094
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGD 193
+ F GN + C+ + + GS++ QCN+ G+C+C+ GV G
Sbjct: 1095 FGGRTCHNCADGYF---GNPDIECYACECNIF-----GSVSTQCNTNTGQCECRDGVGGR 1146
Query: 194 KCDRC 198
+CDRC
Sbjct: 1147 RCDRC 1151
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 104/269 (38%), Gaps = 83/269 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + C FD +Y TG GG C +CQ + G NCE+C YYQ + +
Sbjct: 325 CNCNNHATECHFDPAVYAATGQVSGGVCENCQHNTVGRNCEQCASYYYQDASKDIRDPTV 384
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C AC+C+ GSL+ G+C+CK V G +CD+C ++ G
Sbjct: 385 CVACDCDVAGSLDDGICDGLTDPDLGMIAGQCRCKQYVQGQRCDQCRDGYFGLDANNPNG 444
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C +C+C+ G++ CDS GQC
Sbjct: 445 CTACDCDSLGTLSGANTCDSETGQC----------------------------------I 470
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPA 218
CKR T TG +CD C + GC C+C+
Sbjct: 471 CKRFT-------------------------TGRRCDMCVPQTWGMSAIPHGCNECDCDIG 505
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
G+ N +C+ GQC C+ N+ +C S
Sbjct: 506 GAYDN--DCNQASGQCNCRPNINHRRCDS 532
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 116/265 (43%), Gaps = 37/265 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
CNCNG ++ C D+E G CL C+ + G +C+ C D YY + C AC
Sbjct: 853 CNCNGHTDSC--DQET-------GECLGCRDNTMGAHCDSCIDGYYGNPLLGSLDQCKAC 903
Query: 58 NC---------NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCE 105
C G Q + + C C PG G +CD+C ++ + C+ CE
Sbjct: 904 MCPDGPGSGRQYSTGCRQDQVSGQVVCYCMPGYAGARCDQCAPAYWGNPQTVNGLCRKCE 963
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WDLRRCKRD 164
CN + CDS G C + ++ G H E Q R + GN + + C+ +
Sbjct: 964 CNNNIDPFDPTACDSATGVCTNCLHNTAGP-HCE---QCRDYY--YGNPLDQNCMACQCN 1017
Query: 165 TYPLGHGGSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGS 220
+N QC + G+C C P V+G CD+C NH+ GC+SC C+P S
Sbjct: 1018 LLGTDSSVCVNGQCQCDATTGQCPCYPNVSGQNCDQCLPNHWKLASGTGCESCGCSPEHS 1077
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ T C+ + GQC C D G C
Sbjct: 1078 LGTT--CNEITGQCLCVDGFGGRTC 1100
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 39 EKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYD 95
E+C D + S + C+CNP GS + C + G+CQCKP V G KCDRC Y
Sbjct: 739 EECADLLFSMSAIIHDGAKPCDCNPQGSTSSICETWAGQCQCKPNVIGRKCDRCAPGTYG 798
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
FG GC+ C+C+ GS CD +GQCE
Sbjct: 799 FGPTGCRECDCDALGS--RNEFCDIARGQCE 827
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
SL CN G+C C G G C C ++ + C +CECN GSV + C++
Sbjct: 1077 SLGTTCNEITGQCLCVDGFGGRTCHNCADGYFGNPDIECYACECNIFGSV--STQCNTNT 1134
Query: 232 GQCECKDNVEGAQC 245
GQCEC+D V G +C
Sbjct: 1135 GQCECRDGVGGRRC 1148
>gi|195473999|ref|XP_002089279.1| GE19027 [Drosophila yakuba]
gi|194175380|gb|EDW88991.1| GE19027 [Drosophila yakuba]
Length = 3440
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C + G C+KCR ++ + C C C+P GS +CN G+C CK GV G C+
Sbjct: 1236 CLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIGVGGQHCN 1295
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGR-----VHTELR 141
C + F GC+ C C G V CD G+C + + RG V
Sbjct: 1296 ECTEGFFGFTTEGCQRCSACRSEGQV-----CDPHNGRCICPKFT-RGLACGQCVPGTWG 1349
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDV 200
Q+R R C D H GS+ QCN S+G+CQC+ G +G KCD C V
Sbjct: 1350 WQARLG----------CRECDCD-----HIGSIGQQCNTSDGQCQCREGYSGRKCDTCAV 1394
Query: 201 NHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
++ + E C+ C C+P GS + CDS GQC CK V G +C
Sbjct: 1395 GYFGYPE--CRRCGCDPEGSFTQADGSIACDS-NGQCPCKSLVVGLKC 1439
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 112/290 (38%), Gaps = 90/290 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG SN C G+C DC + G CE+C+ YY
Sbjct: 849 CPCNGHSNSCDL---------QSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTPHDCKRC 899
Query: 47 ----QKSGDNFCTACNCNPIGSLNLQCNSEGR-------CQCKPGVTGDKCDRCDVNHY- 94
+ +NF +C ++L E QC G TGD C CD ++
Sbjct: 900 ACPLPEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFG 959
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G + C+ C+C AG C+ G+C + + ++ G
Sbjct: 960 NPRQLG-SSCQRCDC--AGG-----PCNVTTGECITCRGNTEG----------------- 994
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCN----------------SEGRCQCKPGVTGDKC 195
W RCK LG+ G + C+ ++G+C CKP G KC
Sbjct: 995 ----WHCERCK-----LGYWGDPAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKC 1045
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CDV + + E C SC C+P GS+ CD GQC CK+ V GA+C
Sbjct: 1046 NECDVGYANV-ELRCPSCNCDPLGSLVQD-RCDPHTGQCHCKEGVMGAKC 1093
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 106/276 (38%), Gaps = 67/276 (24%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL-QCNSE-GRCQCKPGV 81
G CL C+ G C +C Y + + C +CNC+P+GSL +C+ G+C CK GV
Sbjct: 1032 GQCL-CKPRYAGQKCNECDVGY--ANVELRCPSCNCDPLGSLVQDRCDPHTGQCHCKEGV 1088
Query: 82 TGDKCDRCDVNHYDFGEAGCK---------------------------------SCECNP 108
G KC C ++ + + C
Sbjct: 1089 MGAKCHECQDGYFGMNALAERMDDLAALRQNSDGEGDDDDWELVPDSEDPDSESAVACEA 1148
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTE-LRVQSRKNFDPAGNRIWD-LRRCKRDTY 166
A +++ PN S QL+S E L + P RIW + R +
Sbjct: 1149 AMRIESLPNW--------SKQLTSILHFGEESLGIPDPGRHGPKPARIWHYVYRTGEQSI 1200
Query: 167 --------PL-------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
P GSL+ C+ G+C C VTG +CD+C H++ G
Sbjct: 1201 AASCAAFRPFLVIECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEG 1260
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C C+P GS + C+ GQC+CK V G C
Sbjct: 1261 CRDCRCDPHGSRGH--ECNPWTGQCDCKIGVGGQHC 1294
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H G C+ C G C +C + C C+C+ IGS+ QCN S+G+CQC+ G
Sbjct: 1325 HNGRCI-CPKFTRGLACGQCVPGTWGWQARLGCRECDCDHIGSIGQQCNTSDGQCQCREG 1383
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQC 125
+G KCD C V ++ + E C+ C C+P GS + CDS GQC
Sbjct: 1384 YSGRKCDTCAVGYFGYPE--CRRCGCDPEGSFTQADGSIACDS-NGQC 1428
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 36/204 (17%)
Query: 53 FCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAG 110
C+C+ +GSL+ C+ G+C C VTG +CD+C H++ GC+ C C+P G
Sbjct: 1211 LVIECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHG 1270
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
S + C+ GQC+ G H + F G C+R +
Sbjct: 1271 SRGH--ECNPWTGQCDCK--IGVGGQHCNECTEGFFGFTTEG--------CQRCS----- 1313
Query: 171 GGSLNLQCNSEG--------RCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSV 221
C SEG RC C G C +C + + GC+ C+C+ GS+
Sbjct: 1314 ------ACRSEGQVCDPHNGRCICPKFTRGLACGQCVPGTWGWQARLGCRECDCDHIGSI 1367
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
C++ GQC+C++ G +C
Sbjct: 1368 GQ--QCNTSDGQCQCREGYSGRKC 1389
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 71/181 (39%), Gaps = 63/181 (34%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C+G+ +G +CE+C+ Y+ C C+C+ GS + C+S +G+C CKP
Sbjct: 983 GECITCRGNTEGWHCERCKLGYWGDPAVG-CDPCHCHTEGSESGLCDSTDGQCLCKPRYA 1041
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G KC+ CDV + + E C SC C
Sbjct: 1042 GQKCNECDVGYANV-ELRCPSCNC------------------------------------ 1064
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
DP G+ + D RC T G+C CK GV G KC C +
Sbjct: 1065 ------DPLGSLVQD--RCDPHT----------------GQCHCKEGVMGAKCHECQDGY 1100
Query: 203 Y 203
+
Sbjct: 1101 F 1101
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 29 CQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGD 84
C+ G CE+C+ Y+ + + C CNC+P G C+ E GRC C+ GVTG
Sbjct: 1807 CKPGYTGRLCERCQAGYFGDPMRHPNTTCQPCNCHPDGVRTEGCDIETGRCYCREGVTGL 1866
Query: 85 KCDRCDVNHYDFGEAGCKSCE 105
KCD+C + + GC+ C+
Sbjct: 1867 KCDKCQAERHYLVDNGCRICD 1887
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 26/137 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C+CNG S+ C D+E G C +C+G+ G +C +C + +Y + + C AC C
Sbjct: 1735 CHCNGRSSDC--DRE-------TGVCQNCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPC 1785
Query: 60 NPIGSLNLQ-----CNSEGRCQCKPGVTGDKCDRCDVNHYDFGE------AGCKSCECNP 108
P + N + E C CKPG TG C+RC + FG+ C+ C C+P
Sbjct: 1786 -PETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGY--FGDPMRHPNTTCQPCNCHP 1842
Query: 109 AGSVKNTPNCDSVKGQC 125
G T CD G+C
Sbjct: 1843 DGV--RTEGCDIETGRC 1857
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGE------AGCKSCECNPAGSVKNTPNCDSVKGQC 234
E C CKPG TG C+RC + FG+ C+ C C+P G T CD G+C
Sbjct: 1802 EVSCVCKPGYTGRLCERCQAGY--FGDPMRHPNTTCQPCNCHPDGV--RTEGCDIETGRC 1857
Query: 235 ECKDNVEGAQC 245
C++ V G +C
Sbjct: 1858 YCREGVTGLKC 1868
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C G + C +D L G C C + G CE C +Y++ C C
Sbjct: 449 CQCYGHAESCTYDSFL-----DKGICQSCSNNTVGNECEFCEMGFYRELDAPLTDPCLPC 503
Query: 58 NCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
+CNP S C S+ G C C G G C+ C +Y G+ CK CEC+ GS+ +
Sbjct: 504 SCNPARSTG-GCQSDGGSCNCLEGFQGKNCEECAPGYY--GDE-CKRCECDERGSLGSKG 559
Query: 117 NCDSV 121
+C V
Sbjct: 560 SCSDV 564
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C +C G NCE+C YY GD C C C+ GSL + + CQCK V
Sbjct: 518 GGSC-NCLEGFQGKNCEECAPGYY---GDE-CKRCECDERGSLGSKGSCSDVCQCKLNVE 572
Query: 83 GDKCDRCDVNHYDFG---EAGCKSCECN 107
G C C ++D GC SC C+
Sbjct: 573 GSTCSECAPGYFDLSAENAEGCTSCWCS 600
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C C G G C+ C +Y G+ CK CEC+ GS+ + +C V C+CK NVE
Sbjct: 519 GSCNCLEGFQGKNCEECAPGYY--GDE-CKRCECDERGSLGSKGSCSDV---CQCKLNVE 572
Query: 242 GAQC 245
G+ C
Sbjct: 573 GSTC 576
>gi|432862991|ref|XP_004069973.1| PREDICTED: netrin-4-like [Oryzias latipes]
Length = 650
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 20/139 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CNG ++ C F + L+ TG GG C C+ + +G C+ C+ YY+ K+ +
Sbjct: 354 CKCNGHASNCHFSRGLWMATGRRSGGVCDQCRHNTEGRRCQTCKRGYYRDASRPKNAADS 413
Query: 54 CTACNCNPIGSL-----NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
C C C+PIGS+ +L S G C CKPGV G +CDRC + H+ E GC+ C+C
Sbjct: 414 CKPCTCHPIGSIFQADGHLCDPSNGNCTCKPGVGGPQCDRCLMGHWGLHEHGCRPCDC-- 471
Query: 109 AGSVKNTPNCDSVKGQCES 127
+CD G C S
Sbjct: 472 ------LGDCDPYTGDCSS 484
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
S G C CKPGV G +CDRC + H+ E GC+ C+C +CD G C +
Sbjct: 436 SNGNCTCKPGVGGPQCDRCLMGHWGLHEHGCRPCDC--------LGDCDPYTGDCSSGSD 487
Query: 240 VE 241
VE
Sbjct: 488 VE 489
>gi|308453155|ref|XP_003089323.1| CRE-LAM-1 protein [Caenorhabditis remanei]
gi|308241157|gb|EFO85109.1| CRE-LAM-1 protein [Caenorhabditis remanei]
Length = 1264
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 93/229 (40%), Gaps = 64/229 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCKPG 80
G CL C +G CE C D YY + C C CN +G+ + G+C C
Sbjct: 1009 GECLKCLHHTEGAQCEHCVDGYYGDAKLKTCQRCVCNELGTNTTKGACDRVSGQCPCHDN 1068
Query: 81 VTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G +CD+C NH++ AGC++C C+P G V PN
Sbjct: 1069 VIGMQCDQCAENHFNLASGAGCEACGCDPNGVV---PN---------------------- 1103
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
H G +LQCN +G+CQCKPG G KCD+C
Sbjct: 1104 ------------------------------HEGVPHLQCNIFDGQCQCKPGRGGRKCDQC 1133
Query: 199 DVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ ++ GC CECNP GS + C G CEC+ GA C
Sbjct: 1134 EDLYWGDPTTPDGCHRCECNPTGS--KSLQCHRNNGTCECQPGSGGALC 1180
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 103/224 (45%), Gaps = 32/224 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ---KSGDN--F 53
CNCN + RC FD+ +Y +G GG C DC + G NCE+C+ YY+ ++ D+
Sbjct: 348 CNCNRHALRCHFDRAVYEASGFVSGGVCDDCMHNTQGKNCEQCKPFYYRDPRRTIDDPHV 407
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+ GS N C E G+C CK V G++CDRC +++ E G
Sbjct: 408 CLPCECDKAGSQNKGICEGEEDAERGLVAGKCYCKTNVDGNRCDRCKNGYWNLTETNIDG 467
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C +C CN G+ N CD G C +L V E Q + +
Sbjct: 468 CVACTCNLLGTYNNE-GCDKYTGLCTCKRL-----VTGENCDQCLPEHYGLSEHVDGCKA 521
Query: 161 CKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C D GGS + C S G+C+C+ G +G +C+ D + Y
Sbjct: 522 CDCDI-----GGSYDNTCEVSTGQCKCREGFSGRRCETADSSFY 560
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 83/192 (43%), Gaps = 40/192 (20%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N + CNC+ GS++ C+ G +C+CKP V G +C++C + Y FG GCK C+C+ G
Sbjct: 778 NKTSECNCDATGSVSGICSVHGGQCECKPNVVGRRCEQCAIGTYGFGPTGCKKCDCDAVG 837
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
S+ N +CD GQC + GR Q + F W C+
Sbjct: 838 SLGN--DCDKQSGQCVCREKGIYGRQCN----QCQPGF-------WGFPECR-------- 876
Query: 171 GGSLNLQCN--------SEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNP 217
QCN + G C +C+ TG CDRC +Y G CK C C P
Sbjct: 877 ----TCQCNDHANICDQTSGACIECRDLTTGHYCDRCQDGYYGDPRLGVGIPCKPCPC-P 931
Query: 218 AGSVKNTPNCDS 229
G + D+
Sbjct: 932 GGPTSGYQHADT 943
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 112/241 (46%), Gaps = 30/241 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP- 79
HGG C +C+ + G CE+C Y G C C+C+ +GSL C+ + G+C C+
Sbjct: 798 HGGQC-ECKPNVVGRRCEQCAIGTY-GFGPTGCKKCDCDAVGSLGNDCDKQSGQCVCREK 855
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G+ G +C++C + F E C++C+CN ++ CD G C + + G H
Sbjct: 856 GIYGRQCNQCQPGFWGFPE--CRTCQCNDHANI-----CDQTSGACIECRDLTTG--HYC 906
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLG------HGGSLNLQCN----SEGRCQCKPG 189
R Q DP R+ CK P G H + L+ + + C CK G
Sbjct: 907 DRCQDGYYGDP---RLGVGIPCKPCPCPGGPTSGYQHADTCYLRNSGNNTQDIVCNCKSG 963
Query: 190 VTGDKCDRCDVNHYDFG-EAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
G++C C NH+ E G C+ C+CN + +CD+ G+C +C + EGAQC
Sbjct: 964 YQGERCGECAQNHWGSPREVGGTCERCDCNGNIDMSMEGSCDAATGECLKCLHHTEGAQC 1023
Query: 246 R 246
Sbjct: 1024 E 1024
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 29 CQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKC 86
C+ R G C++C D Y+ + + C C CNP GS +LQC+ + G C+C+PG G C
Sbjct: 1121 CKPGRGGRKCDQCEDLYWGDPTTPDGCHRCECNPTGSKSLQCHRNNGTCECQPGSGGALC 1180
Query: 87 DRC 89
+ C
Sbjct: 1181 NEC 1183
>gi|410986166|ref|XP_003999383.1| PREDICTED: laminin subunit beta-3 isoform 1 [Felis catus]
gi|410986168|ref|XP_003999384.1| PREDICTED: laminin subunit beta-3 isoform 2 [Felis catus]
Length = 1172
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 121/267 (45%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ HGG C DC+ +G NCE+C+ +Y++
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAHGGVCDDCRDHTEGKNCERCQLHYFRNRRPGAPIQET 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ + C+ G+C CK V G++CD C A GC C+CN
Sbjct: 376 CIPCECDPDGAVPGVPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNI 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGR----VHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
GS ++ P CD G C + ++ S + +P C D
Sbjct: 436 LGSHRDMP-CDEESGHCLCLPHVVGPKCDQCAPYHWKLASGRGCEP----------CACD 484
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCD-----RCDVNHYDFGEAGCKSCECNPA 218
+ SL+ QCN G+C C+ G G CD +C Y GC++C+C+
Sbjct: 485 PH-----NSLSPQCNQFTGQCPCREGFGGLTCDAAALRQCPDRTYGDTGTGCRACDCDFR 539
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD G+C C+ + G +C
Sbjct: 540 GT--EGPGCDKASGRCLCRPGLTGPRC 564
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLD---CQGDRDGPNCEKCRDNY----YQKSGD-- 51
C C+G ++RC + D CQ + GPNCE+C Y ++ + D
Sbjct: 250 CFCHGHADRCAPKPGASSSPSTAVQVHDICVCQHNTAGPNCERCAPFYNNRPWRPADDQD 309
Query: 52 -NFCTACNCN---------PIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG 100
+ C C+CN P Q G C C+ G C+RC ++++ G
Sbjct: 310 PHECQPCDCNGHSETCHFDPAVFAASQGAHGGVCDDCRDHTEGKNCERCQLHYFRNRRPG 369
Query: 101 ------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
C CEC+P G+V P CD V GQC + V E + F G
Sbjct: 370 APIQETCIPCECDPDGAVPGVP-CDPVTGQC-----VCKEHVQGERCDLCKPGF--TGLT 421
Query: 155 IWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
+ + C R D L G ++ C+ E G C C P V G KCD+C H+ GC+
Sbjct: 422 YANPQGCHRCDCNIL--GSHRDMPCDEESGHCLCLPHVVGPKCDQCAPYHWKLASGRGCE 479
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S+ +P C+ GQC C++ G C
Sbjct: 480 PCACDPHNSL--SPQCNQFTGQCPCREGFGGLTC 511
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 85/193 (44%), Gaps = 40/193 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGS-LNLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C C+CN +GS ++ C+ E G C C P
Sbjct: 397 GQCV-CKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSHRDMPCDEESGHCLCLP 455
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C H+ GC+ C C+P S+ +P C+ GQC
Sbjct: 456 HVVGPKCDQCAPYHWKLASGRGCEPCACDPHNSL--SPQCNQFTGQCPC----------- 502
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------------SEGRCQ 185
R+ F LR+C TY G G+ C+ + GRC
Sbjct: 503 ------REGFGGLTCDAAALRQCPDRTY--GDTGTGCRACDCDFRGTEGPGCDKASGRCL 554
Query: 186 CKPGVTGDKCDRC 198
C+PG+TG +CD+C
Sbjct: 555 CRPGLTGPRCDQC 567
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 2 NCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP 61
CN F+ +C R G GG L C D +C D Y +G C AC+C+
Sbjct: 492 QCNQFTGQC------PCREGFGG--LTC----DAAALRQCPDRTYGDTGTG-CRACDCDF 538
Query: 62 IGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
G+ C+ + GRC C+PG+TG +CD+C
Sbjct: 539 RGTEGPGCDKASGRCLCRPGLTGPRCDQC 567
>gi|410919269|ref|XP_003973107.1| PREDICTED: laminin subunit beta-3-like [Takifugu rubripes]
Length = 1158
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 111/266 (41%), Gaps = 40/266 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CN + RC FD +Y +G GG C C GP C++C Y
Sbjct: 307 CECNSHARRCRFDPAVYEASGRRSGGVCEGCMHHTTGPKCDRCAPGYQPNPRSKMDRPDA 366
Query: 54 CTACNCNPIGSLNLQC--NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+ G++N ++ CQCK V G +CDRC +Y A GC C C+
Sbjct: 367 CIRCVCSTEGTVNAGGCDDTTSSCQCKVNVEGPRCDRCKRGYYGLSAANPLGCSKCSCSS 426
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR----- 163
GS+ + CD V GQC R H N D N W +R
Sbjct: 427 DGSISDV--CDPVIGQC-----LCRPHFHGS-------NCDMCSNGYWKPFLSERCVPCN 472
Query: 164 -DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
D S + C+ G+C+C+P G C+ C N + GC+ C+C+P G++
Sbjct: 473 CDPT-----TSYSDTCDQVTGQCRCRPNFGGRTCNECPENTFGDPLLGCQKCQCDPEGTL 527
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCRS 247
C+ G C C+ V G++C S
Sbjct: 528 PE--GCNKQTGVCLCRPGVTGSRCGS 551
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 87/191 (45%), Gaps = 39/191 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ + +GP C++C+ YY S N C+ C+C+ GS++ C+ G+C C+P G
Sbjct: 392 CKVNVEGPRCDRCKRGYYGLSAANPLGCSKCSCSSDGSISDVCDPVIGQCLCRPHFHGSN 451
Query: 86 CDRCDVNHYD-FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
CD C ++ F C C C+P S +T CD V GQC +
Sbjct: 452 CDMCSNGYWKPFLSERCVPCNCDPTTSYSDT--CDQVTGQC-----------------RC 492
Query: 145 RKNFDPAGNRIWDLRRCKRDTY--PL--------GHGGSLNLQCNSE-GRCQCKPGVTGD 193
R NF G R + C +T+ PL G+L CN + G C C+PGVTG
Sbjct: 493 RPNF---GGRTCN--ECPENTFGDPLLGCQKCQCDPEGTLPEGCNKQTGVCLCRPGVTGS 547
Query: 194 KCDRCDVNHYD 204
+C C H D
Sbjct: 548 RCGSCSRGHCD 558
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 111/293 (37%), Gaps = 88/293 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY-------YQKSGDNF 53
C C+G +NRC D + C DCQ + G NCE+C D + ++ +
Sbjct: 249 CMCHGHANRCLPDMQ----NSVTPRC-DCQHNTAGMNCERCDDLFNDLPWRPAEEGKTHS 303
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGV-------------------TGDKCDRCDVNH- 93
C C CN + RC+ P V TG KCDRC +
Sbjct: 304 CQRCECN---------SHARRCRFDPAVYEASGRRSGGVCEGCMHHTTGPKCDRCAPGYQ 354
Query: 94 ------YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
D +A C C C+ G+V N CD C+ +V+ E
Sbjct: 355 PNPRSKMDRPDA-CIRCVCSTEGTV-NAGGCDDTTSSCQC-------KVNVE-------- 397
Query: 148 FDPAGNRIWDLRRCKRDTY------PLG-------HGGSLNLQCNSE-GRCQCKPGVTGD 193
G R RCKR Y PLG GS++ C+ G+C C+P G
Sbjct: 398 ----GPRC---DRCKRGYYGLSAANPLGCSKCSCSSDGSISDVCDPVIGQCLCRPHFHGS 450
Query: 194 KCDRCDVNHYD-FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD C ++ F C C C+P S +T CD V GQC C+ N G C
Sbjct: 451 NCDMCSNGYWKPFLSERCVPCNCDPTTSYSDT--CDQVTGQCRCRPNFGGRTC 501
>gi|195492256|ref|XP_002093913.1| GE20494 [Drosophila yakuba]
gi|194180014|gb|EDW93625.1| GE20494 [Drosophila yakuba]
Length = 3710
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ GS + CN++G+C C+P G +CD
Sbjct: 606 NCLNNFAGKQCTLCTAGYYSYPD---CLPCHCDSYGSQGVSCNADGQCLCQPNFDGRQCD 662
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 663 SCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECK----- 715
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G +L+ + G+C CKP G +C C
Sbjct: 716 ------PLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 769
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D A GCK C C+ GS ++ CD V GQC+C + G C
Sbjct: 770 GTFDLDSASLFGCKDCSCDVGGSWQSV--CDKVSGQCKCHPRITGLAC 815
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 129/316 (40%), Gaps = 103/316 (32%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G SN C +D+E+ NR G GG C +CQ + G NC KC+ YY+ G
Sbjct: 333 CNCHGHSNECKYDEEV-NRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKG 391
Query: 51 --------------DNF------------------------------------CTACNCN 60
DNF C C CN
Sbjct: 392 KHWNETDVCSPCQCDNFFSTGHCEEETGNCECRAAFQPPSCDSCAYGYYGYPNCRECECN 451
Query: 61 PIGSLNLQCNSEG--RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 118
G+ C +E +C CK G C +C +Y F E CK+CECN GS+ N +C
Sbjct: 452 LNGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPE--CKACECNKIGSITN--DC 507
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD--TYPL------GH 170
+ G+C+ L++ G + E RCK YP +
Sbjct: 508 NVTTGECKC--LTNFGGDNCE--------------------RCKHGYFNYPTCSYCDCDN 545
Query: 171 GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
G+ + CN + G+C C+ G G +CD+C Y++ + CK C C+ GS T CD+
Sbjct: 546 QGTESEICNKQSGQCICREGFGGPRCDQCLPGFYNYPD--CKPCNCSSTGSSAIT--CDN 601
Query: 230 VKGQCECKDNVEGAQC 245
G+C C +N G QC
Sbjct: 602 T-GKCNCLNNFAGKQC 616
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 116/275 (42%), Gaps = 56/275 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCN-PIGSLNL-------QCNSE 72
G C CQ G +CE+C YY + + C C C P S N + +
Sbjct: 1822 GICTKCQHGTKGDHCEECVSGYYGNATNGTPGDCMICACPLPFDSNNFADSCEISESGDQ 1881
Query: 73 GRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC--- 125
C+CKPG TG +C+ C Y + GE CK CEC+ + ++ +CD+ G+C
Sbjct: 1882 IHCECKPGYTGPRCESCANGFYGQPENLGEV-CKPCECSGNINPEDQGSCDTRTGECLRC 1940
Query: 126 ------ESAQLSSRGRVHTELRVQS----------RKNFDPA-------GNRIWDL-RRC 161
+ L + G +++++ + DP N I + RC
Sbjct: 1941 LNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTQECDPYVGVCTCHENVIGERCDRC 2000
Query: 162 KRDTYPLGHG----------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
K D Y G S + QC+ G C CK GVTG +CDRC V+H+ + + GC
Sbjct: 2001 KPDHYGFESGVGCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEQDGC 2060
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C CN S C+ G+C+C V G +C
Sbjct: 2061 TPCNCNQGYS--RGFGCNPNTGKCQCLPGVIGDRC 2093
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 108/282 (38%), Gaps = 95/282 (33%)
Query: 22 HGGHCL-------------------DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNC 59
+GG+C+ CQ G +CE+C YY + + C C C
Sbjct: 1801 YGGYCIPCECNGHSETCDCATGICTKCQHGTKGDHCEECVSGYYGNATNGTPGDCMICAC 1860
Query: 60 N-PIGSLNL-------QCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECN 107
P S N + + C+CKPG TG +C+ C Y + GE CK CEC+
Sbjct: 1861 PLPFDSNNFADSCEISESGDQIHCECKPGYTGPRCESCANGFYGQPENLGEV-CKPCECS 1919
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY- 166
+ ++ +CD+ G+C RC +T+
Sbjct: 1920 GNINPEDQGSCDTRTGEC---------------------------------LRCLNNTFG 1946
Query: 167 -------PLGHGGSLNLQ-CNS--------------EGRCQCKPGVTGDKCDRCDVNHYD 204
P +G ++ L+ C S G C C V G++CDRC +HY
Sbjct: 1947 AACNLCAPGFYGDAIKLKNCQSCDCDDLGTQECDPYVGVCTCHENVIGERCDRCKPDHYG 2006
Query: 205 FGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F GC++C+C G+ N+ CD G C CK V G QC
Sbjct: 2007 FESGVGCRACDC---GAASNSTQCDPHTGHCACKSGVTGRQC 2045
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
S G C C P V GD C++C N Y F + GC+ C CNP G CD G C C++
Sbjct: 1432 STGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNAQCDLFNGTCSCRE 1491
Query: 239 NVEGAQC 245
N+EG C
Sbjct: 1492 NIEGRAC 1498
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 86/207 (41%), Gaps = 47/207 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+ +C+ G C C
Sbjct: 1935 GECLRCLNNTFGAACNLCAPGFY---GDAIKLKNCQSCDCDDLGTQ--ECDPYVGVCTCH 1989
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G++CDRC +HY F GC++C+C G+ N+ CD G C + + GR
Sbjct: 1990 ENVIGERCDRCKPDHYGFESGVGCRACDC---GAASNSTQCDPHTGHC-ACKSGVTGR-- 2043
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCN-SEGRCQC 186
RC D + G S CN + G+CQC
Sbjct: 2044 -------------------QCDRCAVDHWKYEQDGCTPCNCNQGYSRGFGCNPNTGKCQC 2084
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PGV GD+CD C + GC+ C
Sbjct: 2085 LPGVIGDRCDACPNRWVLIKDEGCQEC 2111
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C++C + YY G C AC CN IGS+ CN + G C+C GD C+
Sbjct: 470 CKINFAGAYCKQCAEGYY---GFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCE 526
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC H F C C+C+ G+ C+ GQC + R L
Sbjct: 527 RC--KHGYFNYPTCSYCDCDNQGTESEI--CNKQSGQCICREGFGGPRCDQCL------- 575
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P D + C GS + C++ G+C C G +C C +Y + +
Sbjct: 576 --PGFYNYPDCKPCN-----CSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPD 628
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C C+ GS + N D GQC C+ N +G QC S
Sbjct: 629 --CLPCHCDSYGSQGVSCNAD---GQCLCQPNFDGRQCDS 663
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 85/200 (42%), Gaps = 30/200 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + C CR YY G C C C P ++ C S G C C P V
Sbjct: 1391 GGQC-QCKPNVIERTCGACRSRYY---GFPDCKPCKC-PNSAM---CEPSTGECMCPPNV 1442
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
GD C++C N Y F + GC+ C CNP G CD G C S + + GR
Sbjct: 1443 IGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNAQCDLFNGTC-SCRENIEGRA---- 1497
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDT--YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
D N ++ C++ + P G L + +G C CK V G CD+C
Sbjct: 1498 -------CDVCTNGYFNFPHCEQCSCHRP---GTELEVCDKVDGECFCKKNVVGRDCDQC 1547
Query: 199 DVNHYDFGEA---GCKSCEC 215
D Y+ E+ GC +C C
Sbjct: 1548 DDGTYNLQESNPEGCTTCFC 1567
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 84/206 (40%), Gaps = 53/206 (25%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+ GS + +C+ G +CQCKP V C C +Y F + CK C+C N+
Sbjct: 1375 CNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPD--CKPCKC------PNS 1426
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY-------- 166
C+ G+C N I DL +C +TY
Sbjct: 1427 AMCEPSTGECMCPP-----------------------NVIGDLCEKCAPNTYGFHQVIGC 1463
Query: 167 ------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
P+G N QC+ G C C+ + G CD C +++F C+ C C+ G
Sbjct: 1464 EECACNPMGIANG-NAQCDLFNGTCSCRENIEGRACDVCTNGYFNFPH--CEQCSCHRPG 1520
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD V G+C CK NV G C
Sbjct: 1521 TELEV--CDKVDGECFCKKNVVGRDC 1544
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL CQ + DG C+ C++ +Y NF C CNC+P G ++ C S C+
Sbjct: 648 GQCL-CQPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 701
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK VTG C+ C +++ + GC+ C+C G++ C S GQC + ++
Sbjct: 702 CKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQC-PCKPHTQ 760
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R FD ++ + C D GGS C+ G+C+C P +TG
Sbjct: 761 GRRCQECR---DGTFDLDSASLFGCKDCSCDV-----GGSWQSVCDKVSGQCKCHPRITG 812
Query: 193 DKCDRCDVNHY 203
C + H+
Sbjct: 813 LACTQPLTTHF 823
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H GHC C+ G C++C ++++ D CT CNCN S CN + G+CQC PG
Sbjct: 2030 HTGHCA-CKSGVTGRQCDRCAVDHWKYEQDG-CTPCNCNQGYSRGFGCNPNTGKCQCLPG 2087
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSC 104
V GD+CD C + GC+ C
Sbjct: 2088 VIGDRCDACPNRWVLIKDEGCQEC 2111
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 39/229 (17%)
Query: 41 CRDNYYQKS-----GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY- 94
R NY++++ D + T + + G+ Q + RC C PG +G C+ C +Y
Sbjct: 1736 IRANYWEQTLVTHLADVYLTLADEDEEGTSYNQFLAVERCSCPPGYSGLSCEDCAPGYYR 1795
Query: 95 -DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ----SRKN 147
G G C CECN ++ CD G C Q ++G H E V + N
Sbjct: 1796 DPSGPYGGYCIPCECN-----GHSETCDCATGICTKCQHGTKGD-HCEECVSGYYGNATN 1849
Query: 148 FDPAGNRI------WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
P I +D D+ + G + C+CKPG TG +C+ C
Sbjct: 1850 GTPGDCMICACPLPFDSNNFA-DSCEISESG-------DQIHCECKPGYTGPRCESCANG 1901
Query: 202 HY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
Y + GE CK CEC+ + ++ +CD+ G+C C +N GA C
Sbjct: 1902 FYGQPENLGEV-CKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAAC 1949
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNV 240
G C+C+ CD C +Y G C+ CECN G+ N +C++ GQ C CK N
Sbjct: 419 GNCECRAAFQPPSCDSCAYGYY--GYPNCRECECNLNGT--NGYHCEAESGQQCPCKINF 474
Query: 241 EGAQCR 246
GA C+
Sbjct: 475 AGAYCK 480
>gi|326928025|ref|XP_003210185.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-2-like
[Meleagris gallopavo]
Length = 1814
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 52/240 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S RC FD ++ TG+ G C CQ + G C C+ YY+ +
Sbjct: 369 CDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRRCHLCKPFYYKDPSKDLRDPAV 428
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C ACNC+P G+++ + G+C+CK V G +CDRC + A G
Sbjct: 429 CRACNCDPEGTVDGGLCDGADDPERGLIAGQCRCKEHVQGPRCDRCKAGFFGLSAANPQG 488
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
C+ C C+P G+V + CD + G C R+ + ++ D W L
Sbjct: 489 CQRCRCDPRGTVADGSQCDPISGDCLCK------------RLVTGRSCDQCLPEHWALSH 536
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD-------RCDVNHYDF 205
R C+ D GG+ N +C +E G+CQC+ + G +C+ R +++HY +
Sbjct: 537 DLPGCRPCECDV-----GGARNNRCAAETGQCQCRRHIVGRQCEQVEPGFYRINLDHYTY 591
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--------GRC 75
G CL C + GP+C +C+ YY + + C C+CN +G+ C + G+C
Sbjct: 1022 GQCLRCLYNTAGPHCAECQPGYYGDALRHSCRRCSCNALGTDPSTCGPQQCHCDQRSGQC 1081
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N ++ G GC+ C C+P S+ +P C+ GQC S + G
Sbjct: 1082 HCLPHVEGQSCDRCSPNFWNLGSGQGCEPCACHPQHSL--SPACNQFTGQC-SCRPGFGG 1138
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGD 193
R + + Q G+ R C D G + QC+ G C C+PGV+G
Sbjct: 1139 RTCADCQEQH------WGDPRLQCRACDCDPR-----GIASAQCHRGSGHCDCRPGVSGV 1187
Query: 194 KCDRC 198
+CD+C
Sbjct: 1188 RCDQC 1192
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P GSL+ +C +G +C+CKP V G +C RC + + FG GC+ C+C+ GS+
Sbjct: 800 CLCDPQGSLSAECQPQGGQCRCKPNVVGRRCHRCSLGTFGFGPGGCRPCQCSGEGSLSAV 859
Query: 116 PNCDSVKGQC 125
CD+V GQC
Sbjct: 860 --CDTVTGQC 867
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 100/237 (42%), Gaps = 28/237 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
GG C C+ + G C +C + G C C C+ GSL+ C++ G+C C+ G
Sbjct: 815 QGGQC-RCKPNVVGRRCHRCSLGTF-GFGPGGCRPCQCSGEGSLSAVCDTVTGQCPCRQG 872
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE- 139
G +CDRC H+ F C+ C+CN + CD G C R R HT+
Sbjct: 873 AHGSRCDRCQPGHWGF--PTCQPCQCN-----GHAEECDPQTGSC------LRCRDHTDG 919
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL--QCNSEGR-----CQCKPGVTG 192
R Q + + C+ P G GG + C +GR C C PG TG
Sbjct: 920 ERCQRXAGXXXXXPALGSGQHCRPCPCPDGPGGPRHFAASCYQDGRSRQVVCHCSPGYTG 979
Query: 193 DKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+CD C +Y D + G C C+C+ + + CD GQC C N G C
Sbjct: 980 PRCDECAPGYYGDPLQPGGRCLPCQCHNNIDMTDPEACDRRTGQCLRCLYNTAGPHC 1036
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 90/248 (36%), Gaps = 79/248 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNFCTACNCNP--------IGSLNLQ 68
G C+ C+ G NCE+C D Y++ S N C C+CN +
Sbjct: 330 GRCV-CKHHTQGLNCERCEDFYHELPWRPAEGSSTNACRRCDCNEHSRRCHFDMAVFLAT 388
Query: 69 CNSEGRC--QCKPGVTGDKCDRCDVNHY-----DFGE-AGCKSCECNPAGSVKNTPNCDS 120
N+ G C+ G +C C +Y D + A C++C C+P G+V
Sbjct: 389 GNTSGAVCDGCQHNTMGRRCHLCKPFYYKDPSKDLRDPAVCRACNCDPEGTVDG------ 442
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
G C+ A RG +
Sbjct: 443 --GLCDGADDPERGLI-------------------------------------------- 456
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G+C+CK V G +CDRC + A GC+ C C+P G+V + CD + G C CK
Sbjct: 457 AGQCRCKEHVQGPRCDRCKAGFFGLSAANPQGCQRCRCDPRGTVADGSQCDPISGDCLCK 516
Query: 238 DNVEGAQC 245
V G C
Sbjct: 517 RLVTGRSC 524
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 102/264 (38%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG---DNFCTAC 57
C CNG + C G CL C+ DG C++ C C
Sbjct: 894 CQCNGHAEEC---------DPQTGSCLRCRDHTDGERCQRXAGXXXXXPALGSGQHCRPC 944
Query: 58 NC--NPIGSLNL--QCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCE 105
C P G + C +GR C C PG TG +CD C +Y D + G C C+
Sbjct: 945 PCPDGPGGPRHFAASCYQDGRSRQVVCHCSPGYTGPRCDECAPGYYGDPLQPGGRCLPCQ 1004
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ + + CD GQC ++ G E Q D + RRC +
Sbjct: 1005 CHNNIDMTDPEACDRRTGQCLRCLYNTAGPHCAE--CQPGYYGDALRH---SCRRCSCNA 1059
Query: 166 YPLGHGGSLNLQCN---SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
QC+ G+C C P V G CDRC N ++ G GC+ C C+P S+
Sbjct: 1060 LGTDPSTCGPQQCHCDQRSGQCHCLPHVEGQSCDRCSPNFWNLGSGQGCEPCACHPQHSL 1119
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+P C+ GQC C+ G C
Sbjct: 1120 --SPACNQFTGQCSCRPGFGGRTC 1141
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 92/238 (38%), Gaps = 54/238 (22%)
Query: 35 GPNCEKCRDNYYQKSGDNF-----CTACNC-NPIGSLNLQC--NSEGRC-QCKPGVTGDK 85
GP C++C YY GD C C C N I + + G+C +C G
Sbjct: 979 GPRCDECAPGYY---GDPLQPGGRCLPCQCHNNIDMTDPEACDRRTGQCLRCLYNTAGPH 1035
Query: 86 CDRCDVNHY-DFGEAGCKSCECNPAGSVKNT--P---NCDSVKGQCESAQLSSRGRVHTE 139
C C +Y D C+ C CN G+ +T P +CD GQC H
Sbjct: 1036 CAECQPGYYGDALRHSCRRCSCNALGTDPSTCGPQQCHCDQRSGQC-----------HCL 1084
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCK 187
V+ + RC + + LG G SL+ CN G+C C+
Sbjct: 1085 PHVEGQ-----------SCDRCSPNFWNLGSGQGCEPCACHPQHSLSPACNQFTGQCSCR 1133
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
PG G C C H+ C++C+C+P G + C G C+C+ V G +C
Sbjct: 1134 PGFGGRTCADCQEQHWGDPRLQCRACDCDPRGIA--SAQCHRGSGHCDCRPGVSGVRC 1189
>gi|403282675|ref|XP_003932767.1| PREDICTED: laminin subunit alpha-5, partial [Saimiri boliviensis
boliviensis]
Length = 3596
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 97/234 (41%), Gaps = 45/234 (19%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ GP+C++C Y+ G C AC C+P G+L+ C G C C+PG G C
Sbjct: 522 CRPGFAGPHCDRCHPGYH---GFPNCQACTCDPRGALDQLCGVGGVCHCRPGYMGTACQE 578
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR----VQS 144
C + F C C+C+ GS+ CD GQC S R RV T LR V
Sbjct: 579 CSPGFHGF--PSCVPCDCSTEGSLHAA--CDPRSGQC-----SCRPRV-TGLRCDACVTG 628
Query: 145 RKNFD--------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
NF PAG + D P ++ C+C+ V G CD
Sbjct: 629 AYNFPYCEAGSCHPAGLALVD------PALP-----------EAQAPCKCRAHVEGPSCD 671
Query: 197 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
RC + + GC C C+P G++ C GQC CK +V G C +
Sbjct: 672 RCKPGFWGLSPSNPKGCTRCSCDPRGTLGGVAECQPGSGQCFCKPHVCGQACSA 725
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 104/241 (43%), Gaps = 42/241 (17%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKP 79
G GG C C+ G C++C ++ G C C+C+ GSL+ C+ G+C C+P
Sbjct: 560 GVGGVC-HCRPGYMGTACQECSPGFH---GFPSCVPCDCSTEGSLHAACDPRSGQCSCRP 615
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
VTG +CD C Y+F C++ C+PAG P + C+ R H E
Sbjct: 616 RVTGLRCDACVTGAYNFPY--CEAGSCHPAGLALVDPALPEAQAPCKC-------RAHVE 666
Query: 140 LRVQSRKNFDPAGNR----IWDL--------RRCKRDTYPLGHGGSLNLQCNSEGRCQCK 187
P+ +R W L RC D P G G + G+C CK
Sbjct: 667 ---------GPSCDRCKPGFWGLSPSNPKGCTRCSCD--PRGTLGGVAECQPGSGQCFCK 715
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
P V G C C + +A GC+SC C+ G++ P+C+ G C C+ N +G
Sbjct: 716 PHVCGQACSACKDGFFGLDQADYFGCRSCRCDIGGALG--PSCEPRTGTCLCRPNTQGPT 773
Query: 245 C 245
C
Sbjct: 774 C 774
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+ CQ + +GP CE+C+ + D C +C
Sbjct: 1775 CQCHGHSDRCLPGS---------GICVGCQHNTEGPRCERCQAGFMSSGEDPSAPCVSCP 1825
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1826 CPLSVPSNNFAEGCILRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1885
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1886 GDPNLLFSDCDPLTGACRGCLRHTTGPRCELCAPGFYGNALLPGN-------CTRCDCAP 1938
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ GRC CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 1939 CG-----TEACDPHSGRCLCKAGVTGQRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE-- 1991
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 1992 -CHPQSGQCHCQPGTRGPQCR 2011
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 81/210 (38%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1882 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCELCAPGFYGNALLPGNCTRCDC 1936
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ +S GRC CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 1937 APCGTEACDPHS-GRCLCKAGVTGQRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---C 1992
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R R C + L G QC
Sbjct: 1993 HPQSGQCHCQ----------------------PGTRGPQCRECAPGYWGLPEQGCRRCQC 2030
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
G C C PG++G++CD C H
Sbjct: 2031 PGGRCDPHTGHCTCPPGLSGERCDTCSQQH 2060
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 98/260 (37%), Gaps = 62/260 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G + C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 274 CNCHGHATDCYYDPEVDRRRASQSMDGTYQGGGVCIDCQHHTTGINCERCLPGFYRSPDH 333
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+C + + GRC C+P +G++CD C F C
Sbjct: 334 PLDSPHACRRCSCESDFTDGTCEDLTGRCYCRPRFSGERCDSCAEGFTGFP-------RC 386
Query: 107 NPAGSVKN-TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
P S N T GQ + S+ G GN C++D
Sbjct: 387 YPVPSSSNDTGEQVLPAGQIVNCDCSAAGT---------------QGN------ACRKDP 425
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GRC CKP G C+ C F GC+ C+C+ G +
Sbjct: 426 --------------RVGRCVCKPNFQGTHCELCAPG---FHGPGCQPCQCSSPGVADD-- 466
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD G+C C+ EGA C
Sbjct: 467 RCDPDTGRCRCRAGFEGAMC 486
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C+ V G C RC ++ F C+ C+C
Sbjct: 1353 CGCHEVGATGPTCEPFGGQCPCRAHVIGRDCSRCATGYWGFPH--CRPCDCG-------A 1403
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1404 RLCDELTGQC----------------ICPPRTVPP------DCLLCQPQTFGCHPLVGCE 1441
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P V+G +CD C + G C+ C+C+ AG+
Sbjct: 1442 ECNCSGPGVQELTDPTCDADSGQCKCRPNVSGRRCDTCSPGFH--GYPSCRPCDCHDAGT 1499
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD V GQC CK+NV+G +C
Sbjct: 1500 APGV--CDPVTGQCYCKENVQGPRC 1522
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 82/204 (40%), Gaps = 49/204 (24%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C F GC+ C+C+ G
Sbjct: 409 CDCSAAGTQGNACRKDPRVGRCVCKPNFQGTHCELCAPG---FHGPGCQPCQCSSPGVAD 465
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPL 168
+ CD G+C + R F+ A C R +PL
Sbjct: 466 D--RCDPDTGRC-----------------RCRAGFEGA--------MCDRCAPGYFHFPL 498
Query: 169 ------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
G+L C+ GRC C+PG G CDRC ++ F C++C C+P G++
Sbjct: 499 CQLCSCSPAGTLPEGCDEAGRCPCRPGFAGPHCDRCHPGYHGF--PNCQACTCDPRGALD 556
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
C V G C C+ G C+
Sbjct: 557 QL--C-GVGGVCHCRPGYMGTACQ 577
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C+C P G CD G C C +
Sbjct: 1997 GQCHCQPGTRGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGHCTCPPGLS 2049
Query: 242 GAQC 245
G +C
Sbjct: 2050 GERC 2053
>gi|119603831|gb|EAW83425.1| laminin, beta 4, isoform CRA_a [Homo sapiens]
Length = 1615
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 101/220 (45%), Gaps = 36/220 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC---- 54
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 289 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 348
Query: 55 -----TACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 99
AC C+P G+++ + G+C CK V G KCD+C NHY
Sbjct: 349 CIRESPACECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSAT 408
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW 156
GC+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 409 DPLGCQPCDCNPLGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLH 462
Query: 157 DLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 463 GCSPCDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 497
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN F+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 825 CPCNRFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 875
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 876 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACN 935
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 936 NNIDVTDPESCSRVTGECLRCLHNTQG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 990
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
P+ GG L G C C P VTG CDRC +++ G SC+CN AG+ K
Sbjct: 991 VSPMECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNL-VPGRGSCDCNRAGTQK 1049
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
P CD G C C++ V G +C
Sbjct: 1050 --PICDPDTGMCRCREGVSGQRC 1070
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCKP V G CDRC YD
Sbjct: 713 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDL 771
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 772 GHHGCHPCHCHPQGSKDTV--CDQVTGQC 798
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKP V G CDRC YD G GC C C+P GS CD V GQC C V
Sbjct: 748 GQCQCKPLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQGSKDTV--CDQVTGQCPCHGEVS 805
Query: 242 GAQC 245
G +C
Sbjct: 806 GRRC 809
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 72/191 (37%), Gaps = 37/191 (19%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C V+G +CDRC + FG C C CN + CD G C + +
Sbjct: 796 GQCPCHGEVSGRRCDRCLAGY--FGFPSCHPCPCNRFAEL-----CDPETGSCFNCGGFT 848
Query: 133 RGR-----VHTELRVQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GR + S DP+ N+ + H NL +
Sbjct: 849 TGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQYF------------AHSCYQNLW-S 895
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-E 235
S+ C C G TG +C C Y A C+ C CN V + +C V G+C
Sbjct: 896 SDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLR 955
Query: 236 CKDNVEGAQCR 246
C N +GA C+
Sbjct: 956 CLHNTQGANCQ 966
>gi|61744143|gb|AAX55655.1| laminin alpha 1 [Danio rerio]
Length = 3062
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 109/235 (46%), Gaps = 37/235 (15%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCN-SEGRCQ 76
H G CL C G GP+CE+CRD YY GD C AC C GSL+ CN G+C+
Sbjct: 869 HTGECLKCVGHTAGPHCERCRDGYY---GDAIHEKNCQACGCYSNGSLSTICNLITGQCE 925
Query: 77 CKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSV-KGQCESAQLSSR 133
CK V G CDRC ++ GE GC+ CECN +G++ + +CD + QC + +
Sbjct: 926 CKHNVVGKTCDRCQEGYHGIISGE-GCRPCECNQSGAL--SASCDEEGRCQCITGVTGDK 982
Query: 134 -GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVT 191
R H NF G D C HG CN + G C C P
Sbjct: 983 CDRCH-----HGYYNFKENGCTACD---CAHT-----HG-----NCNDQTGECICPPHTH 1024
Query: 192 GDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC++CD H+ G +GCK C C+ GS + CD GQC C G C
Sbjct: 1025 GLKCEQCDEGHWGHDGVSGCKVCNCSAVGSSSSQ--CDLSSGQCVCALQFSGLTC 1077
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 98/244 (40%), Gaps = 58/244 (23%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQK--SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPG--- 80
C CQ G C++C D Y+ + C+ C CN N+ + G C G
Sbjct: 819 CDQCQPGYTGDKCQRCADGYFGEPVVPGQRCSPCECNG----NVDPSEAGHCDTHTGECL 874
Query: 81 -----VTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G C+RC +Y E C++C C GS+ C+ + GQCE
Sbjct: 875 KCVGHTAGPHCERCRDGYYGDAIHEKNCQACGCYSNGSLSTI--CNLITGQCECKH---- 928
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTYPLGHG-----------GSLNLQCNSE 181
N + RC+ + + G G+L+ C+ E
Sbjct: 929 -------------------NVVGKTCDRCQEGYHGIISGEGCRPCECNQSGALSASCDEE 969
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
GRCQC GVTGDKCDRC +Y+F E GC +C+C NC+ G+C C +
Sbjct: 970 GRCQCITGVTGDKCDRCHHGYYNFKENGCTACDC-----AHTHGNCNDQTGECICPPHTH 1024
Query: 242 GAQC 245
G +C
Sbjct: 1025 GLKC 1028
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 116/242 (47%), Gaps = 36/242 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLN-------LQCNSEG 73
G CL C + GP+C++C +Y + + C C+C + N LQ E
Sbjct: 758 GECLGCAHNTTGPHCDQCLPGFYGDASEGTPDDCQRCSCPLTLASNNFSPTCQLQAPGEF 817
Query: 74 RC-QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
C QC+PG TGDKC RC + FGE C CECN +CD+ G+C
Sbjct: 818 ICDQCQPGYTGDKCQRCADGY--FGEPVVPGQRCSPCECNGNVDPSEAGHCDTHTGECLK 875
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQ 185
+ G H E + R + G+ I + + C+ Y GSL+ CN G+C+
Sbjct: 876 CVGHTAGP-HCE---RCRDGY--YGDAIHE-KNCQACGCYS---NGSLSTICNLITGQCE 925
Query: 186 CKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
CK V G CDRC ++ GE GC+ CECN +G++ + +CD +G+C+C V G
Sbjct: 926 CKHNVVGKTCDRCQEGYHGIISGE-GCRPCECNQSGAL--SASCDE-EGRCQCITGVTGD 981
Query: 244 QC 245
+C
Sbjct: 982 KC 983
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+ ++ CF+++ + N G GG C++C+ + G NCE C D YY+
Sbjct: 334 CNCHNKADDCFYNQTVADLKLSMNTHGQFTGGGVCVNCRHNTAGVNCETCADGYYRPHQV 393
Query: 50 ---GDNFCTACNCNPIGSLNLQCN------------SEGRCQCKPGVTGDKCDRCDVNHY 94
+ C C C+ GS++ C S G+C CK G G+KCDRC
Sbjct: 394 SPYAEEPCVECQCDMRGSVSPVCIRDDNHANPDAGLSPGQCVCKEGFAGEKCDRCAFGFR 453
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
DF C CEC+ GS P
Sbjct: 454 DF--PVCSRCECSLDGSHNTDP 473
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQCNSEG----R 74
H G CL CQ + G +C C YY K + C+ C C G S + C EG R
Sbjct: 1419 HTGQCLGCQHNTAGEHCHVCAAGYYGKVQGSVSDCSLCACPLRGQSFSSTCVLEGAGDFR 1478
Query: 75 C-QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCE 126
C +C+ G G C+RC V ++ + E G C+ C C+ +GSV + CD+ G+CE
Sbjct: 1479 CDRCEEGYEGRYCERCAVGYFGNPSEPGGRCQVCACSESGSVHSV--CDAHTGRCE 1532
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG-SLNLQCNSEGRCQCKPGVT 82
G C+ C G CE+C + ++ G + C CNC+ +G S + S G+C C +
Sbjct: 1015 GECI-CPPHTHGLKCEQCDEGHWGHDGVSGCKVCNCSAVGSSSSQCDLSSGQCVCALQFS 1073
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G CDRC + + +F + C +C+CNP G+ CD G C
Sbjct: 1074 GLTCDRCALGYRNFPQ--CSACDCNPNGT--RAQFCDEALGVC 1112
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ +G CE+C Y+ + C C C+ GS++ C++ GRC+CKPGV G
Sbjct: 1482 CEEGYEGRYCERCAVGYFGNPSEPGGRCQVCACSESGSVHSVCDAHTGRCECKPGVRGHL 1541
Query: 86 CDRCDVNHYDFGEAGCKSC 104
CD+C+ H E C SC
Sbjct: 1542 CDQCEERHVLVHEQ-CVSC 1559
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
S G+C CK G G+KCDRC DF C CEC+ GS NT C +C CK N
Sbjct: 430 SPGQCVCKEGFAGEKCDRCAFGFRDF--PVCSRCECSLDGS-HNTDPC----MECVCKAN 482
Query: 240 VEGAQC 245
V G+ C
Sbjct: 483 VMGSHC 488
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV--------KGQ 233
G+C C +G CDRC + + +F + C +C+CNP G+ CD GQ
Sbjct: 1064 GQCVCALQFSGLTCDRCALGYRNFPQ--CSACDCNPNGT--RAQFCDEALGVCGCEDHGQ 1119
Query: 234 CECKDNVEGAQC 245
C CKDNV G C
Sbjct: 1120 CSCKDNVGGRGC 1131
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 171 GGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVK 222
G S + C EG RC +C+ G G C+RC V ++ + E G C+ C C+ +GSV
Sbjct: 1462 GQSFSSTCVLEGAGDFRCDRCEEGYEGRYCERCAVGYFGNPSEPGGRCQVCACSESGSVH 1521
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ CD+ G+CECK V G C
Sbjct: 1522 SV--CDAHTGRCECKPGVRGHLC 1542
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 81/236 (34%), Gaps = 76/236 (32%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRCQ-CKPG 80
HC +C G +CE C +Y+ G F C C CN + +C+ G C C
Sbjct: 711 HC-ECPWGYSGTSCELCIPGFYRVGGILFGGNCLPCECNDHAT---ECDINGECLGCAHN 766
Query: 81 VTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
TG CD+C Y G C+ C C P N
Sbjct: 767 TTGPHCDQCLPGFYGDASEGTPDDCQRCSC-PLTLASN---------------------- 803
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKC 195
NF P C+ LQ E C QC+PG TGDKC
Sbjct: 804 ----------NFSPT---------CQ-------------LQAPGEFICDQCQPGYTGDKC 831
Query: 196 DRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
RC + FGE C CECN +CD+ G+C +C + G C
Sbjct: 832 QRCADGY--FGEPVVPGQRCSPCECNGNVDPSEAGHCDTHTGECLKCVGHTAGPHC 885
>gi|432960246|ref|XP_004086428.1| PREDICTED: laminin subunit alpha-5-like [Oryzias latipes]
Length = 3993
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 108/233 (46%), Gaps = 43/233 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCD 87
C+ + G +C++C YY G CT C+C+P GS ++ C + G+C C PGV G KCD
Sbjct: 1089 CRPNYSGASCDQCAPGYY---GYPSCTPCHCSPEGSRHVACEQTTGQCMCLPGVVGLKCD 1145
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSV--KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
C H +G C++ C+PAGSV P+ GQCE R H E
Sbjct: 1146 ACP--HGSYGFPNCQAGTCHPAGSVHFAALPHV----GQCEC-------RRHVE------ 1186
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLG-------HGGSLN--LQCNSE-GRCQCKPGVTGDKC 195
A +R L P G G+L+ +C E G+C CKP V C
Sbjct: 1187 ---GAACDRCKPLYWNLSPDSPNGCSSCECNIAGTLSGVAECAQETGQCHCKPSVCSGAC 1243
Query: 196 DRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C Y+ GC+SC+C+ GS+ P C+ GQC C+ NVEG +C
Sbjct: 1244 SACKDGFYNLQHHNYFGCQSCQCDIGGSLG--PFCEDQNGQCRCRSNVEGPKC 1294
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 101/228 (44%), Gaps = 47/228 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C Y+ C C C+ IGSL C++ GRC C+P G +C++
Sbjct: 999 CRNGFQGSQCDQCAPGYFYYP---LCQLCGCSTIGSLPEGCDASGRCLCRPEFQGPRCEQ 1055
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C + F C+ C C+P S+ ++ C +V G C R N+
Sbjct: 1056 CRSGFHSF--PNCQECVCDPRTSLDSS--C-TVSGIC-----------------HCRPNY 1093
Query: 149 DPAGNRIWDLRRCKRDTYPL--------GHGGSLNLQC-NSEGRCQCKPGVTGDKCDRCD 199
A +C Y GS ++ C + G+C C PGV G KCD C
Sbjct: 1094 SGAS-----CDQCAPGYYGYPSCTPCHCSPEGSRHVACEQTTGQCMCLPGVVGLKCDACP 1148
Query: 200 VNHYDFGEAGCKSCECNPAGSV--KNTPNCDSVKGQCECKDNVEGAQC 245
H +G C++ C+PAGSV P+ GQCEC+ +VEGA C
Sbjct: 1149 --HGSYGFPNCQAGTCHPAGSVHFAALPHV----GQCECRRHVEGAAC 1190
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 98/259 (37%), Gaps = 68/259 (26%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+ + C++D E+ + GH GG CL+CQ G NCE+C YY+
Sbjct: 804 CNCHHHAFECYYDPEIDRKRLSLDIHGHHRGGGVCLNCQHHTTGVNCERCIPTYYRSPDH 863
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C CNC + + GRC CKP TGD C+ C F E + E
Sbjct: 864 PINSPQACLPCNCQMEFTDGTCEDLTGRCFCKPNYTGDDCNSCASGFIGFPEC-YRDGEA 922
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
PAG + N CE S+ G V R R
Sbjct: 923 KPAGEIIN----------CEC---SAAGTVENSCRPDPRT-------------------- 949
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G C CKPG TGD CD C Y C++C+C G +
Sbjct: 950 ---------------GTCICKPGFTGDHCDTCAPGFYGL---NCQACQCLGPGCYDGS-- 989
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD V G C++ +G+QC
Sbjct: 990 CDLVSGDGVCRNGFQGSQC 1008
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 50/210 (23%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G+ + C G +C+C+P V G C C ++ F C+ C C
Sbjct: 1865 NNGAMPCACHEVGAESDTCEQFGGQCRCRPNVIGRDCSMCATGYWGF--PNCRPCNCG-- 1920
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--- 166
+ C+ V G+C P + + +C+ T+
Sbjct: 1921 -----SRLCEPVNGEC----------------------ICPPRTLLPECSQCEPQTFGCH 1953
Query: 167 PL--------GHGGSLNL--QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
P+ HGG L+ C+S G+C CK + G +CDRC + +Y G C+ CEC
Sbjct: 1954 PIVGCEVCNCSHGGVLSHDDSCDSLNGQCSCKNNIIGRQCDRCALGYY--GYPNCRPCEC 2011
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N AG+ + CDSV G+C CK+NV+GA+C
Sbjct: 2012 NEAGTEEEV--CDSVTGRCLCKENVQGARC 2039
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
H G C C+ GP CE+C D + + C+ C+C+ +L C+ + G+C C+PG
Sbjct: 2468 HTGQC-HCKAGVTGPRCERCEDGTFGFDSCSGCSQCDCDASAALVQPCHPQSGQCACQPG 2526
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCEC 106
V G C +C +D+G GCK C+C
Sbjct: 2527 VNGPNCRQCAPGFWDYGTNGCKKCDC 2552
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 100/263 (38%), Gaps = 63/263 (23%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCN- 60
N F+ RC + G CL C GP CE+C +Y + C CNCN
Sbjct: 2354 NNFAERCV-------QGGDSLQCL-CMPGYAGPRCERCAPGFYGNPMVLGSSCQPCNCNG 2405
Query: 61 --PIGSLNLQCNSE-GRC-QCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKN 114
L + C+ + G+C C GD C C Y C C+C+P G
Sbjct: 2406 NSDPNMLFIDCHPQTGKCLSCMHNTAGDHCHLCAPGFYGDAISAKNCTKCDCSPCG---- 2461
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH---- 170
T +CD GQC H + V G R RC+ T+
Sbjct: 2462 TKSCDPHTGQC-----------HCKAGV--------TGPRC---ERCEDGTFGFDSCSGC 2499
Query: 171 -------GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+L C+ + G+C C+PGV G C +C +D+G GCK C+C
Sbjct: 2500 SQCDCDASAALVQPCHPQSGQCACQPGVNGPNCRQCAPGFWDYGTNGCKKCDCR------ 2553
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+CD G+C C D G QC
Sbjct: 2554 --GHCDPRTGECHCPDGTTGKQC 2574
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTA 56
CNCNG S+ + + +TG CL C + G +C C +Y GD CT
Sbjct: 2401 CNCNGNSDPNMLFIDCHPQTGK---CLSCMHNTAGDHCHLCAPGFY---GDAISAKNCTK 2454
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT 115
C+C+P G+ + ++ G+C CK GVTG +C+RC+ + F +GC C+C+ + ++
Sbjct: 2455 CDCSPCGTKSCDPHT-GQCHCKAGVTGPRCERCEDGTFGFDSCSGCSQCDCDASAALVQP 2513
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
C GQC + Q G + R+C + G G
Sbjct: 2514 --CHPQSGQC-ACQPGVNGP---------------------NCRQCAPGFWDYGTNGCKK 2549
Query: 176 LQCNSE-----GRCQCKPGVTGDKCDRC 198
C G C C G TG +CD+C
Sbjct: 2550 CDCRGHCDPRTGECHCPDGTTGKQCDKC 2577
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C++C YY G C C CN G+ C+S GRC CK V G +CD
Sbjct: 1984 CKNNIIGRQCDRCALGYY---GYPNCRPCECNEAGTEEEVCDSVTGRCLCKENVQGARCD 2040
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
+C + + GC SC C
Sbjct: 2041 QCRIGTFHLDPTNPKGCTSCFC 2062
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 22/120 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
CNCNG S++C G CL+CQ + G CEKC + S D AC+
Sbjct: 2294 CNCNGHSDQCL---------DGSGLCLNCQHNTAGNQCEKCTGGFLGNNSLDGQAVACSS 2344
Query: 60 ------NPIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
P + +C G +C C PG G +C+RC Y + C+ C CN
Sbjct: 2345 CPCPLRAPSNNFAERCVQGGDSLQCLCMPGYAGPRCERCAPGFYGNPMVLGSSCQPCNCN 2404
>gi|345789797|ref|XP_855195.2| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Canis
lupus familiaris]
Length = 2113
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ + DGP+C++CR ++ G C AC C+P G+L+ C + G C C+ G TG C
Sbjct: 764 CRPEFDGPHCDRCRPGHH---GYPDCRACTCDPRGALDQLCGAGGTCHCRAGYTGAACQE 820
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR----VQS 144
C + F + C C C+ GS+ + CD GQC S R V T LR V
Sbjct: 821 CSPGFHGFPD--CTPCNCSAEGSLHAS--CDPRSGQC-----SCRPSV-TGLRCDMCVPG 870
Query: 145 RKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
NF C+ + +P G + + ++ C C+ V G CDRC +
Sbjct: 871 AYNFP----------YCEAGSCHPAGLAPAGHRLPEAQVPCTCRAHVEGPSCDRCKPGFW 920
Query: 204 DFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
GC C+C+P G++ C GQC CK +V G C +
Sbjct: 921 GLSPENPEGCTRCDCDPRGTLGGLTECQPGDGQCSCKPHVCGQTCAA 967
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 103/259 (39%), Gaps = 59/259 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G ++ CF+D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 515 CNCHGHAHDCFYDPEVDRRNASQNQDNVYQGGGVCIDCQHHTTGINCERCLPGFYRAPDH 574
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC + + GRC C+P TG++CD C G G C
Sbjct: 575 PLDSPHACRRCNCESDFTDGTCEDLTGRCYCRPNFTGERCDACAE-----GFTGFPHCYP 629
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P+ S +T GQ + S+ G GN C++D
Sbjct: 630 VPSFSPNDTGEQVLPAGQIVNCDCSAAGT---------------QGN------ACRQDP- 667
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
GRC CKPG G C+ C Y GC+ C+C+ G +
Sbjct: 668 -------------RLGRCVCKPGFQGVHCELCAPGFYG---PGCQPCQCSSPGVADG--D 709
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD G+C C++ EGA C
Sbjct: 710 CDRDSGRCTCREGFEGAAC 728
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G CDR
Sbjct: 719 CREGFEGAACDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCPCRPEFDGPHCDR 775
Query: 89 CDVNHYDFGEAGCKSCECNPAGSV 112
C H+ + + C++C C+P G++
Sbjct: 776 CRPGHHGYPD--CRACTCDPRGAL 797
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 49/204 (24%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKPG G C+ C Y GC+ C+C+ G
Sbjct: 651 CDCSAAGTQGNACRQDPRLGRCVCKPGFQGVHCELCAPGFYG---PGCQPCQCSSPGVAD 707
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPL 168
+CD G+C R+ F+ A C R +PL
Sbjct: 708 G--DCDRDSGRCTC-----------------REGFEGAA--------CDRCAPGYFHFPL 740
Query: 169 ------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
G+L C+ GRC C+P G CDRC H+ + + C++C C+P G++
Sbjct: 741 CQLCGCSPAGTLPEGCDEAGRCPCRPEFDGPHCDRCRPGHHGYPD--CRACTCDPRGALD 798
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
C + G C C+ GA C+
Sbjct: 799 QL--CGA-GGTCHCRAGYTGAACQ 819
>gi|24158431|ref|NP_571104.1| netrin 1a precursor [Danio rerio]
gi|2327065|gb|AAC60252.1| netrin-1a [Danio rerio]
gi|165993482|emb|CAP71961.1| ntn1a [Danio rerio]
Length = 603
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ S
Sbjct: 340 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRKA 399
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC N Y + C P
Sbjct: 400 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-ANGYQQSRSPIAPCIKIPIAPP 458
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
T + CES +S+G++ ++ +K++
Sbjct: 459 TTTASSTEEPSDCESYCKASKGKLKINMKKYCKKDY 494
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG ++RC D++ G +C+ + GP C++C+ +Y + N
Sbjct: 284 CKCNGHASRCVKDRD-------GNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANE 336
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D +
Sbjct: 337 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISH 396
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 397 RKACKACDCHPVGAAGKT--CNQTTGQC 422
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 90/226 (39%), Gaps = 52/226 (23%)
Query: 27 LDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR--CQCKPGVTG 83
L GD + + E RD+Y+ D C CN S ++ + +G C+CK G
Sbjct: 253 LHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVK-DRDGNLVCECKHNTAG 311
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RV 142
+CDRC HYD + E N + NC+ +C R + EL ++
Sbjct: 312 PECDRCKPFHYDRPWQRATAREANECVAC----NCNLHARRC---------RFNMELYKL 358
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS-LNLQCNSEGR--CQCKPGVTGDKCDRCD 199
RK+ GG LN + N+ GR CK G D
Sbjct: 359 SGRKS-----------------------GGVCLNCRHNTAGRHCHYCKEGYYRDMSK--P 393
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++H CK+C+C+P G+ T C+ GQC CKD V G C
Sbjct: 394 ISH----RKACKACDCHPVGAAGKT--CNQTTGQCPCKDGVTGITC 433
>gi|313224219|emb|CBY32304.1| unnamed protein product [Oikopleura dioica]
Length = 2301
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 114/256 (44%), Gaps = 44/256 (17%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCN- 60
N S C+ DK+ + +CQ GP CEKC ++ + + C C+CN
Sbjct: 1937 NSHSVSCYHDKDDFKIV------CNCQYGYTGPACEKCDAGFFGRPNMINQECKKCDCNG 1990
Query: 61 --PIGSLNLQC-NSEGRC-QCKPGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVK 113
+ + N+QC N +G C C G C++C + FG E C+SC CN GS
Sbjct: 1991 NSDMSTGNVQCDNQDGTCLACVNDTAGKHCEKC--APFFFGNAIEKTCESCVCNICGS-- 2046
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD---TYPLGH 170
CD++ G C+ + V E D + WD C T
Sbjct: 2047 --QGCDNIFGDCQC-----KPNVIGE-------TCDKCADGFWDFDSCHITGCKTCACHP 2092
Query: 171 GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
GSL+ C+ G+C CKPGV G CD+C HYD GCKSC C PAG CDS
Sbjct: 2093 DGSLSDVCDKLTGQCTCKPGVEGLSCDKCQEGHYDLTSTGCKSCNC-PAGL-----PCDS 2146
Query: 230 VKGQCECKDNVEGAQC 245
G+CEC V GAQC
Sbjct: 2147 QTGRCECPPGVIGAQC 2162
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C D G +CEKC ++ + + C +C CN GS N G CQCKP V G
Sbjct: 2006 GTCLACVNDTAGKHCEKCAPFFFGNAIEKTCESCVCNICGSQGCD-NIFGDCQCKPNVIG 2064
Query: 84 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+ CD+C +DF GCK+C C+P GS+ + CD + GQC
Sbjct: 2065 ETCDKCADGFWDFDSCHITGCKTCACHPDGSLSDV--CDKLTGQCTCK------------ 2110
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG------SLNLQCNSE-GRCQCKPGVTGD 193
G +C+ Y L G L C+S+ GRC+C PGV G
Sbjct: 2111 ----------PGVEGLSCDKCQEGHYDLTSTGCKSCNCPAGLPCDSQTGRCECPPGVIGA 2160
Query: 194 KCDRCD 199
+CD+C+
Sbjct: 2161 QCDQCE 2166
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 79/178 (44%), Gaps = 38/178 (21%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C+CKP V G C RC+V +Y++ C+ C C V NT CD G+C
Sbjct: 1441 GQCECKPNVIGRDCSRCEVGYYNW--PNCRKCNC-----VGNTV-CDENTGEC------- 1485
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-----GRCQCK 187
PA N D C+ D Y H + + G+C C
Sbjct: 1486 ---------------LCPA-NTSEDCLSCQNDAYGYHHITEGTIGASESCDDHNGQCACL 1529
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P +TG CDRC +Y F CK CEC+ G++ + CD G C+CKDNVEG C
Sbjct: 1530 PSITGKSCDRCLPGYYGF--PNCKKCECDERGTIGDNNQCDVKTGACQCKDNVEGTSC 1585
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-NLQCN-SEGRCQCKPGVTGDKC 86
C DG CEKCR Y+ C C C+ IG+L N C+ G+C CK +G +C
Sbjct: 584 CDDRFDGAKCEKCRAGYHTFPD---CVDCTCSEIGTLKNEPCDIYTGQCACKEEYSGVRC 640
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
D+C N Y CK+CEC+ G+ + CD V GQC+ Q L + +
Sbjct: 641 DQCADNFYMDESGFCKACECDLNGA--ESGYCDKVTGQCQCRQTDG-------LAQTTGR 691
Query: 147 NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN--SEGRCQCKPGVTGDKCDRCDVNHY 203
D ++ +C+ +P G C+ G C CK G C++C H+
Sbjct: 692 RCDSCALGFFNFPKCESCPCHPDGIANPDKAYCSFFETGTCTCKRATGGMYCEQCLNKHW 751
Query: 204 DFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
+ A GC+ C C AG + +C S GQC CK++V
Sbjct: 752 NLQGANPDGCEECGCFRAGLLNEIKDCASSDGQCSCKNHV 791
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 113/275 (41%), Gaps = 63/275 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY--YQKSGDNF-CTAC 57
C CN N C + E+ T C+D + G NCE C + Y Y K G + C C
Sbjct: 1877 CKCN---NHCDYCDEVAQSTLEYSTCMD---NTAGQNCEYCAEGYIGYAKGGTSSDCKRC 1930
Query: 58 NC-NPIGSLNLQC-----NSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNP 108
C + S ++ C + + C C+ G TG C++CD + + CK C+CN
Sbjct: 1931 PCPSEQNSHSVSCYHDKDDFKIVCNCQYGYTGPACEKCDAGFFGRPNMINQECKKCDCNG 1990
Query: 109 AGSVKN-TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
+ CD+ G C + + G+ H E +C P
Sbjct: 1991 NSDMSTGNVQCDNQDGTCLACVNDTAGK-HCE--------------------KCA----P 2025
Query: 168 LGHGGSLNLQC--------------NSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGC 210
G ++ C N G CQCKP V G+ CD+C +DF GC
Sbjct: 2026 FFFGNAIEKTCESCVCNICGSQGCDNIFGDCQCKPNVIGETCDKCADGFWDFDSCHITGC 2085
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
K+C C+P GS+ + CD + GQC CK VEG C
Sbjct: 2086 KTCACHPDGSLSDV--CDKLTGQCTCKPGVEGLSC 2118
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 110/268 (41%), Gaps = 40/268 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+ ++RC++D+ + R G GG C+DC+ G NCE+C + +Y+
Sbjct: 345 CNCHQHADRCYYDENV-ERNGLSVSAEGIYEGGGVCVDCKHHTTGINCERCENGFYRNPA 403
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
+ C C+C P + C+ + G C+CK G C+ C +F E C C
Sbjct: 404 ADIIDVGACLECDC-PSNYTDTTCDHDTGACKCKEKYAGHLCNSCAEGFMNFPE--CDPC 460
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF-----DPAGNRIWDLR 159
C AG T GQC +S ++N+ D + ++
Sbjct: 461 PCFYAG----TEATQDASGQCRPDDISG--------TCSCKENYTGSMCDQCADGFFNFP 508
Query: 160 RCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
C G N C+ E G C CKP GD C++C ++++ C C C+
Sbjct: 509 DCLPCECAQQPGAIKNASCDKESGACVCKPAFDGDSCEQCATRYHNY--PACDRCLCSEY 566
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G+ + N C C D +GA+C
Sbjct: 567 GTTDDFCNATLSTLSCFCDDRFDGAKCE 594
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 103/233 (44%), Gaps = 29/233 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCK-----PGVT 82
C+ + G C++C DN+Y FC AC C+ G+ + C+ G+CQC+ T
Sbjct: 631 CKEEYSGVRCDQCADNFYMDES-GFCKACECDLNGAESGYCDKVTGQCQCRQTDGLAQTT 689
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CD C + ++F + C+SC C+P G N D K C + + T R
Sbjct: 690 GRRCDSCALGFFNFPK--CESCPCHPDG----IANPD--KAYCSFFETGT----CTCKRA 737
Query: 143 QSRKNFDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
+ N+ W+L+ D + G + +S+G+C CK V KC
Sbjct: 738 TGGMYCEQCLNKHWNLQGANPDGCEECGCFRAGLLNEIKDCASSDGQCSCKNHVCTRKCS 797
Query: 197 RCDVNHYDFGEA---GCKSCECNPAGSVKNT-PNCDSVKGQCECKDNVEGAQC 245
+C Y E GC C C+ G+ C+ GQC CKD+V+G +C
Sbjct: 798 KCLDGFYGLEEKDYFGCVPCSCDVGGTEGGALAQCEGNNGQCTCKDHVKGRRC 850
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 94/228 (41%), Gaps = 29/228 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---SEGRCQCKPGVTGDK 85
C+ DG +CE+C Y+ C C C+ G+ + CN S C C G K
Sbjct: 536 CKPAFDGDSCEQCATRYHNYPA---CDRCLCSEYGTTDDFCNATLSTLSCFCDDRFDGAK 592
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
C++C ++ F + C C C+ G++KN P CD GQC + S R Q
Sbjct: 593 CEKCRAGYHTFPD--CVDCTCSEIGTLKNEP-CDIYTGQCACKEEYSGVRCD-----QCA 644
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCK-----PGVTGDKCDRCDV 200
NF + C + G+ + G+CQC+ TG +CD C +
Sbjct: 645 DNFYMDESGFCKACECDLNGAESGYCDKVT------GQCQCRQTDGLAQTTGRRCDSCAL 698
Query: 201 NHYDFGEAGCKSCECNPAGSV-KNTPNCDSVK-GQCECKDNVEGAQCR 246
++F + C+SC C+P G + C + G C CK G C
Sbjct: 699 GFFNFPK--CESCPCHPDGIANPDKAYCSFFETGTCTCKRATGGMYCE 744
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 112/285 (39%), Gaps = 63/285 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-------DNF 53
C+CNG ++ C DK N + C DC+ + G +C++C + Q+ +N
Sbjct: 286 CDCNGHADECSADK---NSGDYKLRC-DCKHNTAGISCQECMPLFNQRKWKHAERDHENE 341
Query: 54 CTACNCNP----------IGSLNLQCNSEGRCQ-------CKPGVTGDKCDRCDVNHY-- 94
C ACNC+ + L ++EG + CK TG C+RC+ Y
Sbjct: 342 CVACNCHQHADRCYYDENVERNGLSVSAEGIYEGGGVCVDCKHHTTGINCERCENGFYRN 401
Query: 95 ---DFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
D + G C C+C P+ T CD G C+ + + ++
Sbjct: 402 PAADIIDVGACLECDC-PSNYTDTT--CDHDTGACKCKEKYAGHLCNS------------ 446
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNS--------EGRCQCKPGVTGDKCDRCDVNH 202
+ C D P + G+ Q S G C CK TG CD+C
Sbjct: 447 CAEGFMNFPEC--DPCPCFYAGTEATQDASGQCRPDDISGTCSCKENYTGSMCDQCADGF 504
Query: 203 YDFGEAGCKSCEC-NPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
++F + C CEC G++KN +CD G C CK +G C
Sbjct: 505 FNFPD--CLPCECAQQPGAIKNA-SCDKESGACVCKPAFDGDSCE 546
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 38/141 (26%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYY-----------------QKSGDNFCTA------- 56
+GG C +C+ + G +C +C YY + +G+ C A
Sbjct: 1438 AYGGQC-ECKPNVIGRDCSRCEVGYYNWPNCRKCNCVGNTVCDENTGECLCPANTSEDCL 1496
Query: 57 -CNCNPIGSLNLQCNS----------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
C + G ++ + G+C C P +TG CDRC +Y F CK CE
Sbjct: 1497 SCQNDAYGYHHITEGTIGASESCDDHNGQCACLPSITGKSCDRCLPGYYGF--PNCKKCE 1554
Query: 106 CNPAGSVKNTPNCDSVKGQCE 126
C+ G++ + CD G C+
Sbjct: 1555 CDERGTIGDNNQCDVKTGACQ 1575
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL--NLQCNSE-GRCQCK 78
H G C C G +C++C YY G C C C+ G++ N QC+ + G CQCK
Sbjct: 1522 HNGQCA-CLPSITGKSCDRCLPGYY---GFPNCKKCECDERGTIGDNNQCDVKTGACQCK 1577
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECN 107
V G C RC + AGC SC C+
Sbjct: 1578 DNVEGTSCSRCKAGSFFLDSQNPAGCISCFCS 1609
>gi|301609245|ref|XP_002934184.1| PREDICTED: laminin subunit alpha-3-like [Xenopus (Silurana)
tropicalis]
Length = 3303
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 131/313 (41%), Gaps = 72/313 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQ---- 47
CNC+G ++ C++D ++ R G GG C++CQ + G NCE+C YY+
Sbjct: 332 CNCHGHASDCYYDADIDTRKGSLDIYGQYRGGGVCINCQHNTAGVNCERCAKGYYRPYGV 391
Query: 48 -KSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---------- 96
K + C C+C+P + + S GRC CKP +G+ C+RC Y+F
Sbjct: 392 PKEASHGCVPCSCSPDKADGCEEGS-GRCYCKPNFSGNNCERCAEGFYNFPVCTRIPFYP 450
Query: 97 ---------GEAG-CKSCECNPAGSVKNT---------------PNCDSVK------GQC 125
AG K C C+P G V CD + +C
Sbjct: 451 GVTESPTEDPSAGHIKECNCHPTGVVPEVCDPTGKCLCHFRAEGAQCDQCRPGYHSFPKC 510
Query: 126 ESAQLSSRGRVHTELRVQSRKNF---DPAGNR-------IWDLRRCKRDTYPLGHGGSLN 175
E+ Q SS+G + + + + + D G R D RC+ + G+L+
Sbjct: 511 EACQCSSQGSYQSTCDLVTGQCYCRPDATGQRCDKCTSGSHDFPRCEGFSGECDPTGTLH 570
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKG 232
+Q +G C+C P V G C+RC +++ GC C C G++ C +G
Sbjct: 571 IQ---DGYCRCLPRVEGLTCNRCKPLYWNLARENPNGCADCMCEVQGTISGIGECHKTEG 627
Query: 233 QCECKDNVEGAQC 245
C CK NV A C
Sbjct: 628 DCYCKTNVCSASC 640
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNCN G+ N C+ G +C C+ + G +C RC +Y F C+SC C +
Sbjct: 1253 CNCNLEGATNPTCSPYGGQCSCRANIIGRRCSRCATGYYGFPH--CRSCNCG-------S 1303
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSL 174
CD V G+C + + + E+ Q ++ P L C+ + +G
Sbjct: 1304 RLCDEVTGKCICPPQTLKPK--CEICNQQSFSYHP-------LVGCEGCNCSTVGVVQPT 1354
Query: 175 NLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
C+ + G+C+CKP + G +CDRC H+ F + C C+CNP G+ + C+ G
Sbjct: 1355 LSHCDGTSGQCKCKPRIVGRQCDRCSPGHFHFPD--CFPCDCNPKGTEPHI--CNPHTGT 1410
Query: 234 CECKDNVEGAQC 245
C CK+NV G +C
Sbjct: 1411 CLCKENVIGKKC 1422
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 102/249 (40%), Gaps = 68/249 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C +G C++CR Y+ C AC C+ GS C+ G+C C+P T
Sbjct: 484 GKCL-CHFRAEGAQCDQCRPGYHSFPK---CEACQCSSQGSYQSTCDLVTGQCYCRPDAT 539
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE--- 139
G +CD+C +DF P C+ G+C+ G +H +
Sbjct: 540 GQRCDKCTSGSHDF-------------------PRCEGFSGECDPT-----GTLHIQDGY 575
Query: 140 ----LRVQSRKNFDPAGNR----IWDLRR----------CKRDTYPLGHGGSLNLQCN-S 180
RV+ NR W+L R C+ G G +C+ +
Sbjct: 576 CRCLPRVEGL-----TCNRCKPLYWNLARENPNGCADCMCEVQGTISGIG-----ECHKT 625
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCEC 236
EG C CK V CD C +Y EA GCK C+C+ G++ + C G C C
Sbjct: 626 EGDCYCKTNVCSASCDTCKDGYY-LLEARNYFGCKGCQCDLGGAISHL--CSESSGTCSC 682
Query: 237 KDNVEGAQC 245
+DNVEG +C
Sbjct: 683 RDNVEGMKC 691
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 59/135 (43%), Gaps = 23/135 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG SNRC G C++C D G CE C++ Y + C C C
Sbjct: 1675 CMCNGHSNRC---------QDGSGICINCLHDTTGDYCEFCKEGYTGNATLGNCRLCPCP 1725
Query: 61 ---PIGSLNLQCNSEGR---CQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAG 110
P S C GR C CKPG G C+RC +Y FG + C+ C C G
Sbjct: 1726 LSVPSNSFATGCVGTGRNMRCMCKPGYAGVSCERCAPGYYGNPLKFG-SSCQPCNCGNNG 1784
Query: 111 SVKNTPNCDSVKGQC 125
++ +CD + G+C
Sbjct: 1785 QLR---SCDPLTGEC 1796
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN----SEGRCQCKPGVTGDKCDRCDV 91
P CE C + C CNC+ +G + + + G+C+CKP + G +CDRC
Sbjct: 1322 PKCEICNQQSFSYHPLVGCEGCNCSTVGVVQPTLSHCDGTSGQCKCKPRIVGRQCDRCSP 1381
Query: 92 NHYDFGEAGCKSCECNPAGS 111
H+ F + C C+CNP G+
Sbjct: 1382 GHFHFPD--CFPCDCNPKGT 1399
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 83/208 (39%), Gaps = 32/208 (15%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
+GG C C+ + G C +C YY G C +CNC GS L G+C C P
Sbjct: 1268 YGGQC-SCRANIIGRRCSRCATGYY---GFPHCRSCNC---GS-RLCDEVTGKCICPPQT 1319
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTE 139
KC+ C+ + + GC+ C C+ G V+ T +CD GQC+
Sbjct: 1320 LKPKCEICNQQSFSYHPLVGCEGCNCSTVGVVQPTLSHCDGTSGQCKCKP---------- 1369
Query: 140 LRVQSRK--NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
R+ R+ P D C D P G + CN G C CK V G KCD
Sbjct: 1370 -RIVGRQCDRCSPGHFHFPDCFPC--DCNPKGTEPHI---CNPHTGTCLCKENVIGKKCD 1423
Query: 197 RCDVNHYDF---GEAGCKSCECNPAGSV 221
C + +GC +C C A +
Sbjct: 1424 VCRRGSFRLDSSNPSGCTTCFCFGATDI 1451
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 35/188 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACN-----CNPIGSLNLQCNSEGRCQCKPGVTG 83
C+ D G C+KC SG + C C+P G+L++Q +G C+C P V G
Sbjct: 534 CRPDATGQRCDKC------TSGSHDFPRCEGFSGECDPTGTLHIQ---DGYCRCLPRVEG 584
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT-- 138
C+RC +++ GC C C G++ C +G C T
Sbjct: 585 LTCNRCKPLYWNLARENPNGCADCMCEVQGTISGIGECHKTEGDCYCKTNVCSASCDTCK 644
Query: 139 --ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKC 195
+++R F G C+ D GG+++ C+ S G C C+ V G KC
Sbjct: 645 DGYYLLEARNYFGCKG--------CQCDL-----GGAISHLCSESSGTCSCRDNVEGMKC 691
Query: 196 DRCDVNHY 203
++ N+Y
Sbjct: 692 NQPKSNYY 699
>gi|410918665|ref|XP_003972805.1| PREDICTED: netrin-4-like [Takifugu rubripes]
Length = 615
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 73/140 (52%), Gaps = 22/140 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CNG + C FD + +G GG C DC + +G C+KC+ N+Y+ + +
Sbjct: 326 CKCNGHALSCHFDWTAWRESGQRSGGVC-DCLHNTEGRQCQKCKVNFYRDPRRPHAAPDS 384
Query: 54 CTACNCNPIGSLNLQCN------SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 107
C +CNC+P+GSL + S G C CKPGV G CDRC V ++ F GC+ C+C
Sbjct: 385 CKSCNCHPLGSLPFHFDGSVCDPSNGNCICKPGVGGAHCDRCMVGYWGFHGYGCRPCDC- 443
Query: 108 PAGSVKNTPNCDSVKGQCES 127
AG +CD G C S
Sbjct: 444 -AG------DCDPFTGDCVS 456
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ F GC+ C+C AG +CD G C
Sbjct: 408 SNGNCICKPGVGGAHCDRCMVGYWGFHGYGCRPCDC--AG------DCDPFTGDC 454
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHY------DFGEAGCKSCECNPAGSVK---NTPNCDSV 230
S G C C G +C +C VN Y CKSC C+P GS+ + CD
Sbjct: 349 SGGVCDCLHNTEGRQCQKCKVNFYRDPRRPHAAPDSCKSCNCHPLGSLPFHFDGSVCDPS 408
Query: 231 KGQCECKDNVEGAQC 245
G C CK V GA C
Sbjct: 409 NGNCICKPGVGGAHC 423
>gi|395516305|ref|XP_003762331.1| PREDICTED: laminin subunit beta-2-like [Sarcophilus harrisii]
Length = 1870
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 106/237 (44%), Gaps = 26/237 (10%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ G C++C+ Y G C+ C C+P GS +L C+S G+C C+PG+
Sbjct: 866 GGQC-PCRPHVIGQRCDQCKPQTY-GFGPAGCSECRCSPEGSTSLTCDSLSGQCSCQPGI 923
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
TG +CDRC + F C+ CECN +T C G C++ ++ GR H E R
Sbjct: 924 TGRRCDRCLPGQWGFPH--CQPCECN-----GHTEQCHPHTGACQACGDATTGR-HCE-R 974
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG-----RCQCKPGVTGDKCD 196
Q DP R C + LG G C ++G C C PG G +CD
Sbjct: 975 CQDGYYGDPVLGSGQQCRPCPCPGF-LGSGNYHATSCQADGGSERILCFCAPGYAGPRCD 1033
Query: 197 RCDVNHYD-------FGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQC 245
RC ++ G A C+ C+CN + CD G C+ C + G C
Sbjct: 1034 RCSAGYFGRPWPEGIVGGAPCRPCQCNNNIDPSDPMACDPHSGHCQRCLHHTHGPHC 1090
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 100/231 (43%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-----F 53
C C+ + C FD ++ +G+ GG C CQ G +CE CR Y++ ++
Sbjct: 362 CECHQHARSCHFDMAVFVASGNVSGGVCDACQHHTAGRHCEICRPFYHRDPREDPRSPYT 421
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P G+L+ ++ G+C+CK V G +CD C +Y A G
Sbjct: 422 CKPCDCDPSGTLDGGLCDTHTDEVRGLLSGQCRCKAHVWGPRCDTCRPGYYGLSPALPEG 481
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
C SC C+P G+V CDS+ G C R + +N D W L
Sbjct: 482 CLSCRCDPRGTVPGDTPCDSISGDCYCK------------RFVTGQNCDQCLPEFWGLSS 529
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+ + +C+S EG C C+P + G C ++
Sbjct: 530 DFTGCRPCDCD-----FGGAYSNRCSSGEGLCPCRPHLQGRDCLELQSGYF 575
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 111/274 (40%), Gaps = 48/274 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------C 54
C CNG + +C H G C C G +CE+C+D YY GD C
Sbjct: 944 CECNGHTEQCH---------PHTGACQACGDATTGRHCERCQDGYY---GDPVLGSGQQC 991
Query: 55 TACNC-NPIGSLNLQ---CNSEG-----RCQCKPGVTGDKCDRCDVNHYD-------FGE 98
C C +GS N C ++G C C PG G +CDRC ++ G
Sbjct: 992 RPCPCPGFLGSGNYHATSCQADGGSERILCFCAPGYAGPRCDRCSAGYFGRPWPEGIVGG 1051
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN-FDPAGNRIWD 157
A C+ C+CN + CD G C+ + G + + N P G
Sbjct: 1052 APCRPCQCNNNIDPSDPMACDPHSGHCQRCLHHTHGPHCSHCQPGYYGNALRPRG----- 1106
Query: 158 LRRC---KRDTYP--LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCK 211
RRC +R T P G + G C C+P V G CDRC ++ G GC+
Sbjct: 1107 CRRCGCDQRGTVPGRCPPGSGICFCDRLSGHCPCRPHVLGRLCDRCAPQFWNLGGPRGCE 1166
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P SV+ P C V GQC C++ G C
Sbjct: 1167 PCACHPQHSVQ--PACHLVTGQCPCREGFGGRTC 1198
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
AC C+P GSL+ +C G +C C+P V G +CD+C Y FG AGC C C+P GS
Sbjct: 849 ACECDPQGSLSSECARVGGQCPCRPHVIGQRCDQCKPQTYGFGPAGCSECRCSPEGSTSL 908
Query: 115 TPNCDSVKGQC 125
T CDS+ GQC
Sbjct: 909 T--CDSLSGQC 917
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G +CD C +Y A GC SC C+P G+V CDS+ G C CK
Sbjct: 451 GQCRCKAHVWGPRCDTCRPGYYGLSPALPEGCLSCRCDPRGTVPGDTPCDSISGDCYCKR 510
Query: 239 NVEGAQC 245
V G C
Sbjct: 511 FVTGQNC 517
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 72/178 (40%), Gaps = 43/178 (24%)
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G + C R + +G +CEC+P GS+ + C V GQC R H
Sbjct: 826 GPPSESCARLVCSISALLYSGGLACECDPQGSLSS--ECARVGGQCPC-------RPHV- 875
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------GSLNLQCNS-EGRCQCKP 188
G R +CK TY G GS +L C+S G+C C+P
Sbjct: 876 -----------IGQRC---DQCKPQTYGFGPAGCSECRCSPEGSTSLTCDSLSGQCSCQP 921
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQC 245
G+TG +CDRC + F C+ CECN +T C G C+ C D G C
Sbjct: 922 GITGRRCDRCLPGQWGFPH--CQPCECN-----GHTEQCHPHTGACQACGDATTGRHC 972
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
GHC C+ G C++C ++ G C C C+P S+ C+ G+C C+ G
Sbjct: 1136 GHC-PCRPHVLGRLCDRCAPQFWNLGGPRGCEPCACHPQHSVQPACHLVTGQCPCREGFG 1194
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
G C +C ++ E C++C C+P GS+
Sbjct: 1195 GRTCSQCQEGYWGDPEKECRACACDPQGSI 1224
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 93/237 (39%), Gaps = 41/237 (17%)
Query: 35 GPNCEKCRDNYYQKS------GDNFCTACNCN----PIGSLNLQCNSEGRCQ-CKPGVTG 83
GP C++C Y+ + G C C CN P + +S G CQ C G
Sbjct: 1029 GPRCDRCSAGYFGRPWPEGIVGGAPCRPCQCNNNIDPSDPMACDPHS-GHCQRCLHHTHG 1087
Query: 84 DKCDRCDVNHY--DFGEAGCKSCECNPAGSVKN--TPN-----CDSVKGQCESAQLSSRG 134
C C +Y GC+ C C+ G+V P CD + G C
Sbjct: 1088 PHCSHCQPGYYGNALRPRGCRRCGCDQRGTVPGRCPPGSGICFCDRLSGHCPC------- 1140
Query: 135 RVHTELRVQSRKNFDPAGNRIWDL---RRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
R H R+ R + W+L R C+ H S+ C+ G+C C+ G
Sbjct: 1141 RPHVLGRLCDR-----CAPQFWNLGGPRGCEPCACHPQH--SVQPACHLVTGQCPCREGF 1193
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
G C +C ++ E C++C C+P GS+ C G C C + + G +C++
Sbjct: 1194 GGRTCSQCQEGYWGDPEKECRACACDPQGSISL--RCHPRTGACSCLEGISGPRCKA 1248
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 104/263 (39%), Gaps = 68/263 (25%)
Query: 29 CQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNP------------IGSLNLQC 69
CQ GP+CE+C+D ++ + + C C C+ + S N+
Sbjct: 327 CQHQTAGPHCERCQDLFHDQPWRPAEPGNAHACRECECHQHARSCHFDMAVFVASGNV-- 384
Query: 70 NSEGRC-QCKPGVTGDKCDRC-DVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVK 122
S G C C+ G C+ C H D E CK C+C+P+G++
Sbjct: 385 -SGGVCDACQHHTAGRHCEICRPFYHRDPREDPRSPYTCKPCDCDPSGTLDG-------- 435
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR--RCKRDTYPLGHG---GSLNLQ 177
G C++ RG + + R ++ +W R C+ Y L G L+ +
Sbjct: 436 GLCDTHTDEVRGLLSGQCRCKAH---------VWGPRCDTCRPGYYGLSPALPEGCLSCR 486
Query: 178 CNSEGR-------------CQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVK 222
C+ G C CK VTG CD+C + GC+ C+C+ G+
Sbjct: 487 CDPRGTVPGDTPCDSISGDCYCKRFVTGQNCDQCLPEFWGLSSDFTGCRPCDCDFGGAYS 546
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
N C S +G C C+ +++G C
Sbjct: 547 N--RCSSGEGLCPCRPHLQGRDC 567
>gi|67466782|sp|Q00174.2|LAMA_DROME RecName: Full=Laminin subunit alpha; AltName: Full=Laminin A chain;
Flags: Precursor
Length = 3712
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ GS + CNS+G+C C+P G +CD
Sbjct: 606 NCLNNFAGKQCTLCTAGYYSYPD---CLPCHCDSHGSQGVSCNSDGQCLCQPNFDGRQCD 662
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 663 SCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECK----- 715
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G +L+ + G+C CKP G +C C
Sbjct: 716 ------PLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 769
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D A GCK C C+ GS ++ CD + GQC+C + G C
Sbjct: 770 GTFDLDSASLFGCKDCSCDVGGSWQSV--CDKISGQCKCHPRITGLAC 815
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 104/260 (40%), Gaps = 74/260 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCN-PIGSLNL-------QCNSE 72
G C CQ +G +CE+C YY + + C C C P S N + +
Sbjct: 1823 GICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQ 1882
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+CKPG TG +C+ C Y E+ CK CEC+ + ++ +CD+ G+C
Sbjct: 1883 IHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGSCDTRTGEC---- 1938
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--------PLGHGGSLNLQ-CNS 180
RC +T+ P +G ++ L+ C S
Sbjct: 1939 -----------------------------LRCLNNTFGAACNLCAPGFYGDAIKLKNCQS 1969
Query: 181 --------------EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
G C C V GD+CDRC +HY F GC++C+C G+ N+
Sbjct: 1970 CDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNST 2026
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD G C CK V G QC
Sbjct: 2027 QCDPHTGHCACKSGVTGRQC 2046
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 113/270 (41%), Gaps = 56/270 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G SN C +D+E+ NR G GG C +CQ + G NC KC+ YY+ G
Sbjct: 333 CNCHGHSNECKYDEEV-NRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKG 391
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
++ C+ C C+ S C E G C+C+ CD C +Y G C+ C
Sbjct: 392 KHWNETDVCSPCQCDYFFSTG-HCEEETGNCECRAAFQPPSCDSCAYGYY--GYPNCREC 448
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN G+ N +C++ GQ +++ G ++C
Sbjct: 449 ECNLNGT--NGYHCEAESGQQCPCKINFAGAY---------------------CKQCAEG 485
Query: 165 TYPLGH--------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
Y GS+ CN + G C+C GD C+RC H F C C+C
Sbjct: 486 YYGFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERC--KHGYFNYPTCSYCDC 543
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G+ C+ GQC C++ G +C
Sbjct: 544 DNQGTESEI--CNKQSGQCICREGFGGPRC 571
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C P V GD C++C N Y F + GC+ C CNP G CD G CEC+
Sbjct: 1432 TTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ 1491
Query: 239 NVEGAQC 245
N+EG C
Sbjct: 1492 NIEGRAC 1498
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+ C+ G C C
Sbjct: 1936 GECLRCLNNTFGAACNLCAPGFY---GDAIKLKNCQSCDCDDLGTQT--CDPFVGVCTCH 1990
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V GD+CDRC +HY F GC++C+C G+ N+ CD G C + + GR
Sbjct: 1991 ENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNSTQCDPHTGHC-ACKSGVTGR-- 2044
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCN-SEGRCQC 186
RC D + G S CN + G+CQC
Sbjct: 2045 -------------------QCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQC 2085
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PGV GD+CD C + GC+ C
Sbjct: 2086 LPGVIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C++C + YY G C AC CN IGS+ CN + G C+C GD C+
Sbjct: 470 CKINFAGAYCKQCAEGYY---GFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCE 526
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC H F C C+C+ G+ C+ GQC + R L
Sbjct: 527 RC--KHGYFNYPTCSYCDCDNQGTESEI--CNKQSGQCICREGFGGPRCDQCL------- 575
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P D + C GS + C++ G+C C G +C C +Y + +
Sbjct: 576 --PGFYNYPDCKPCN-----CSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPD 628
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C C+ GS + N D GQC C+ N +G QC S
Sbjct: 629 --CLPCHCDSHGSQGVSCNSD---GQCLCQPNFDGRQCDS 663
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 84/206 (40%), Gaps = 53/206 (25%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+ GS + +C+ G +CQCKP V C C +Y F + CK C+C N+
Sbjct: 1375 CNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPD--CKPCKC------PNS 1426
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY-------- 166
C+ G+C N I DL +C +TY
Sbjct: 1427 AMCEPTTGECMCPP-----------------------NVIGDLCEKCAPNTYGFHQVIGC 1463
Query: 167 ------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
P+G N QC+ G C+C+ + G CD C +++F C+ C C+ G
Sbjct: 1464 EECACNPMGIANG-NSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPH--CEQCSCHKPG 1520
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD + G C CK NV G C
Sbjct: 1521 TELEV--CDKIDGACFCKKNVVGRDC 1544
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL CQ + DG C+ C++ +Y NF C CNC+P G ++ C S C+
Sbjct: 648 GQCL-CQPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 701
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK VTG C+ C +++ + GC+ C+C G++ C S GQC + ++
Sbjct: 702 CKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQC-PCKPHTQ 760
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R FD ++ + C D GGS C+ G+C+C P +TG
Sbjct: 761 GRRCQECR---DGTFDLDSASLFGCKDCSCDV-----GGSWQSVCDKISGQCKCHPRITG 812
Query: 193 DKCDRCDVNHY 203
C + H+
Sbjct: 813 LACTQPLTTHF 823
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + C CR YY G C C C P ++ C + G C C P V
Sbjct: 1391 GGQC-QCKPNVIERTCGACRSRYY---GFPDCKPCKC-PNSAM---CEPTTGECMCPPNV 1442
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
GD C++C N Y F + GC+ C CNP G CD G CE Q + GR
Sbjct: 1443 IGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ-NIEGRA---- 1497
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDT--YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
D N ++ C++ + P G L + +G C CK V G CD+C
Sbjct: 1498 -------CDVCSNGYFNFPHCEQCSCHKP---GTELEVCDKIDGACFCKKNVVGRDCDQC 1547
Query: 199 DVNHYDFGEA---GCKSCEC 215
Y+ E+ GC +C C
Sbjct: 1548 VDGTYNLQESNPDGCTTCFC 1567
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H GHC C+ G C++C ++++ D CT CNCN S CN + G+CQC PG
Sbjct: 2031 HTGHCA-CKSGVTGRQCDRCAVDHWKYEKDG-CTPCNCNQGYSRGFGCNPNTGKCQCLPG 2088
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSC 104
V GD+CD C + GC+ C
Sbjct: 2089 VIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 41 CRDNYYQKS-----GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY- 94
R NY++++ D + T + + G+ Q + RC C PG +G C+ C +Y
Sbjct: 1737 IRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYR 1796
Query: 95 -DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G G C CECN ++ CD G C Q + G H E R S +
Sbjct: 1797 DPSGPYGGYCIPCECN-----GHSETCDCATGICSKCQHGTEGD-HCE-RCVSGYYGNAT 1849
Query: 152 GNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
D C D+ ++ + + C+CKPG TG +C+ C Y E
Sbjct: 1850 NGTPGDCMICACPLPFDSNNFATSCEIS-ESGDQIHCECKPGYTGPRCESCANGFYGEPE 1908
Query: 208 A---GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+ CK CEC+ + ++ +CD+ G+C C +N GA C
Sbjct: 1909 SIGQVCKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAAC 1950
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNV 240
G C+C+ CD C +Y G C+ CECN G+ N +C++ GQ C CK N
Sbjct: 419 GNCECRAAFQPPSCDSCAYGYY--GYPNCRECECNLNGT--NGYHCEAESGQQCPCKINF 474
Query: 241 EGAQCR 246
GA C+
Sbjct: 475 AGAYCK 480
>gi|189182208|gb|ACD81880.1| SD07123p [Drosophila melanogaster]
Length = 3712
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ GS + CNS+G+C C+P G +CD
Sbjct: 606 NCLNNFAGKQCTLCTAGYYSYPD---CLPCHCDSHGSQGVSCNSDGQCLCQPNFDGRQCD 662
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 663 SCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECK----- 715
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G +L+ + G+C CKP G +C C
Sbjct: 716 ------PLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 769
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D A GCK C C+ GS ++ CD + GQC+C + G C
Sbjct: 770 GTFDLDSASLFGCKDCSCDVGGSWQSV--CDKISGQCKCHPRITGLAC 815
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 113/270 (41%), Gaps = 56/270 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G SN C +D+E+ NR G GG C +CQ + G NC KC+ YY+ G
Sbjct: 333 CNCHGHSNECKYDEEV-NRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKG 391
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
++ C+ C C+ S C E G C+C+ CD C +Y G C+ C
Sbjct: 392 KHWNETDVCSPCQCDYFFSTG-HCEEETGNCECRAAFQPPSCDSCAYGYY--GYPNCREC 448
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN G+ N +C++ GQ +++ G ++C
Sbjct: 449 ECNLNGT--NGYHCEAESGQQCPCKINFAGAY---------------------CKQCAEG 485
Query: 165 TYPLGH--------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
Y GS+ CN + G C+C GD C+RC H F C C+C
Sbjct: 486 YYGFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERC--KHGYFNYPTCSYCDC 543
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G+ C+ GQC C++ G +C
Sbjct: 544 DNQGTESEI--CNKQSGQCICREGFGGPRC 571
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 108/282 (38%), Gaps = 95/282 (33%)
Query: 22 HGGHCL-------------------DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNC 59
+GG+C+ CQ +G +CE+C YY + + C C C
Sbjct: 1802 YGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICAC 1861
Query: 60 N-PIGSLNL-------QCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECN 107
P S N + + C+CKPG TG +C+ C Y GE CK CEC+
Sbjct: 1862 PLPFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGEV-CKPCECS 1920
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY- 166
+ ++ +CD+ G+C RC +T+
Sbjct: 1921 GNINPEDQGSCDTRTGEC---------------------------------LRCLNNTFG 1947
Query: 167 -------PLGHGGSLNLQ-CNS--------------EGRCQCKPGVTGDKCDRCDVNHYD 204
P +G ++ L+ C S G C C V GD+CDRC +HY
Sbjct: 1948 AACNLCAPGFYGDAIKLKNCQSCDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYG 2007
Query: 205 FGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F GC++C+C G+ N+ CD G C CK V G QC
Sbjct: 2008 FESGVGCRACDC---GAASNSTQCDPHTGHCACKSGVTGRQC 2046
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 116/275 (42%), Gaps = 56/275 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCN-PIGSLNL-------QCNSE 72
G C CQ +G +CE+C YY + + C C C P S N + +
Sbjct: 1823 GICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQ 1882
Query: 73 GRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC--- 125
C+CKPG TG +C+ C Y GE CK CEC+ + ++ +CD+ G+C
Sbjct: 1883 IHCECKPGYTGPRCESCANGFYGEPESIGEV-CKPCECSGNINPEDQGSCDTRTGECLRC 1941
Query: 126 ------ESAQLSSRGRVHTELRVQS----------RKNFDPA-------GNRIWDL-RRC 161
+ L + G +++++ + DP N I D RC
Sbjct: 1942 LNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTQTCDPFVGVCTCHENVIGDRCDRC 2001
Query: 162 KRDTYPLGHG----------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
K D Y G S + QC+ G C CK GVTG +CDRC V+H+ + + GC
Sbjct: 2002 KPDHYGFESGVGCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGC 2061
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C CN S C+ G+C+C V G +C
Sbjct: 2062 TPCNCNQGYS--RGFGCNPNTGKCQCLPGVIGDRC 2094
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C P V GD C++C N Y F + GC+ C CNP G CD G CEC+
Sbjct: 1432 TTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ 1491
Query: 239 NVEGAQC 245
N+EG C
Sbjct: 1492 NIEGRAC 1498
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+ C+ G C C
Sbjct: 1936 GECLRCLNNTFGAACNLCAPGFY---GDAIKLKNCQSCDCDDLGTQT--CDPFVGVCTCH 1990
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V GD+CDRC +HY F GC++C+C G+ N+ CD G C + + GR
Sbjct: 1991 ENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNSTQCDPHTGHC-ACKSGVTGR-- 2044
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCN-SEGRCQC 186
RC D + G S CN + G+CQC
Sbjct: 2045 -------------------QCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQC 2085
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PGV GD+CD C + GC+ C
Sbjct: 2086 LPGVIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C++C + YY G C AC CN IGS+ CN + G C+C GD C+
Sbjct: 470 CKINFAGAYCKQCAEGYY---GFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCE 526
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC H F C C+C+ G+ C+ GQC + R L
Sbjct: 527 RC--KHGYFNYPTCSYCDCDNQGTESEI--CNKQSGQCICREGFGGPRCDQCL------- 575
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P D + C GS + C++ G+C C G +C C +Y + +
Sbjct: 576 --PGFYNYPDCKPCN-----CSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPD 628
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C C+ GS + N D GQC C+ N +G QC S
Sbjct: 629 --CLPCHCDSHGSQGVSCNSD---GQCLCQPNFDGRQCDS 663
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 84/206 (40%), Gaps = 53/206 (25%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+ GS + +C+ G +CQCKP V C C +Y F + CK C+C N+
Sbjct: 1375 CNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPD--CKPCKC------PNS 1426
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY-------- 166
C+ G+C N I DL +C +TY
Sbjct: 1427 AMCEPTTGECMCPP-----------------------NVIGDLCEKCAPNTYGFHQVIGC 1463
Query: 167 ------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
P+G N QC+ G C+C+ + G CD C +++F C+ C C+ G
Sbjct: 1464 EECACNPMGIANG-NSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPH--CEQCSCHKPG 1520
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD + G C CK NV G C
Sbjct: 1521 TELEV--CDKIDGACFCKKNVVGRDC 1544
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL CQ + DG C+ C++ +Y NF C CNC+P G ++ C S C+
Sbjct: 648 GQCL-CQPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 701
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK VTG C+ C +++ + GC+ C+C G++ C S GQC + ++
Sbjct: 702 CKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQC-PCKPHTQ 760
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R FD ++ + C D GGS C+ G+C+C P +TG
Sbjct: 761 GRRCQECR---DGTFDLDSASLFGCKDCSCDV-----GGSWQSVCDKISGQCKCHPRITG 812
Query: 193 DKCDRCDVNHY 203
C + H+
Sbjct: 813 LACTQPLTTHF 823
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + C CR YY G C C C P ++ C + G C C P V
Sbjct: 1391 GGQC-QCKPNVIERTCGACRSRYY---GFPDCKPCKC-PNSAM---CEPTTGECMCPPNV 1442
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
GD C++C N Y F + GC+ C CNP G CD G CE Q + GR
Sbjct: 1443 IGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ-NIEGRA---- 1497
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDT--YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
D N ++ C++ + P G L + +G C CK V G CD+C
Sbjct: 1498 -------CDVCSNGYFNFPHCEQCSCHKP---GTELEVCDKIDGACFCKKNVVGRDCDQC 1547
Query: 199 DVNHYDFGEA---GCKSCEC 215
Y+ E+ GC +C C
Sbjct: 1548 VDGTYNLQESNPDGCTTCFC 1567
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H GHC C+ G C++C ++++ D CT CNCN S CN + G+CQC PG
Sbjct: 2031 HTGHCA-CKSGVTGRQCDRCAVDHWKYEKDG-CTPCNCNQGYSRGFGCNPNTGKCQCLPG 2088
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSC 104
V GD+CD C + GC+ C
Sbjct: 2089 VIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 94/223 (42%), Gaps = 27/223 (12%)
Query: 41 CRDNYYQKS-----GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY- 94
R NY++++ D + T + + G+ Q + RC C PG +G C+ C +Y
Sbjct: 1737 IRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYR 1796
Query: 95 -DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G G C CECN ++ CD G C Q + G H E R S +
Sbjct: 1797 DPSGPYGGYCIPCECN-----GHSETCDCATGICSKCQHGTEGD-HCE-RCVSGYYGNAT 1849
Query: 152 GNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---- 203
D C D+ ++ + + C+CKPG TG +C+ C Y
Sbjct: 1850 NGTPGDCMICACPLPFDSNNFATSCEIS-ESGDQIHCECKPGYTGPRCESCANGFYGEPE 1908
Query: 204 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
GE CK CEC+ + ++ +CD+ G+C C +N GA C
Sbjct: 1909 SIGEV-CKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAAC 1950
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNV 240
G C+C+ CD C +Y G C+ CECN G+ N +C++ GQ C CK N
Sbjct: 419 GNCECRAAFQPPSCDSCAYGYY--GYPNCRECECNLNGT--NGYHCEAESGQQCPCKINF 474
Query: 241 EGAQCR 246
GA C+
Sbjct: 475 AGAYCK 480
>gi|195034153|ref|XP_001988835.1| GH10359 [Drosophila grimshawi]
gi|193904835|gb|EDW03702.1| GH10359 [Drosophila grimshawi]
Length = 1788
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 109/265 (41%), Gaps = 80/265 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNF 53
C CN + C FD+ ++ +G GG C +C + G +CE+C +Y Q S N
Sbjct: 352 CECNNHAVSCHFDEAVFAASGFVSGGVCDNCLHNTQGQHCEECMAFFYRDPLEQLSSPNV 411
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C AC+C+P GSL+ C+S G C CKP VTG +CDRC ++ +A G
Sbjct: 412 CKACDCDPDGSLDDGICDSVNDPENGAVAGACHCKPNVTGRRCDRCKEGYWQLNQANPDG 471
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+SC CN G+V N+ C+ G+C
Sbjct: 472 CESCTCNTLGTVNNS-GCNMHNGEC----------------------------------H 496
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
CKR L G N QC+P G E GC C C+ GS
Sbjct: 497 CKR----LVTGKDCN---------QCQPETFG----------LSESEDGCTHCSCDIGGS 533
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
N CD + GQC C+ ++ G C
Sbjct: 534 FDNY--CDVLTGQCRCRSHMTGRTC 556
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N + CNCNP GS + +C+S G CQCKP V G +CD+C Y FG GC++C+CN
Sbjct: 783 NNGASMCNCNPTGSFSKECDSNGGFCQCKPNVVGRQCDQCAPGTYGFGPEGCRACDCNSI 842
Query: 110 GSVKNTPNCDSVKGQC 125
GS N NCD + GQC
Sbjct: 843 GSKDN--NCDLLTGQC 856
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 19/183 (10%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS---LNLQCNSEGRCQC 77
G G CL C D G +CE CRD Y+ + C C C+ +G+ L G+C C
Sbjct: 1007 GQTGACLKCLYDTTGDHCELCRDGYHGDALQQNCRQCECDFLGTNRTLAYCDRHTGQCPC 1066
Query: 78 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
P V G C++C +NH+ GC+ C C+ G+++ C + GQCE Q GR
Sbjct: 1067 LPNVEGLLCNQCALNHWKIATGEGCEPCNCDAIGAMQE--QCHTFTGQCECRQ-GFGGRA 1123
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
+ + GN + C D + G+ + QC+ E G+C C G+ GDKC
Sbjct: 1124 CNQCQAHY------WGNPNEKCQACMCDQF-----GAADFQCDRETGQCVCHEGIGGDKC 1172
Query: 196 DRC 198
+ C
Sbjct: 1173 NEC 1175
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 185 QCKPGVTGDKCDRC-DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
+C TGD C+ C D H D + C+ CEC+ G+ + CD GQC C NVEG
Sbjct: 1014 KCLYDTTGDHCELCRDGYHGDALQQNCRQCECDFLGTNRTLAYCDRHTGQCPCLPNVEGL 1073
Query: 244 QC 245
C
Sbjct: 1074 LC 1075
>gi|17136292|ref|NP_476617.1| laminin A [Drosophila melanogaster]
gi|10728114|gb|AAF50672.2| laminin A [Drosophila melanogaster]
Length = 3712
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ GS + CNS+G+C C+P G +CD
Sbjct: 606 NCLNNFAGKQCTLCTAGYYSYPD---CLPCHCDSHGSQGVSCNSDGQCLCQPNFDGRQCD 662
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 663 SCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECK----- 715
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G +L+ + G+C CKP G +C C
Sbjct: 716 ------PLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 769
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D A GCK C C+ GS ++ CD + GQC+C + G C
Sbjct: 770 GTFDLDSASLFGCKDCSCDVGGSWQSV--CDKISGQCKCHPRITGLAC 815
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 104/260 (40%), Gaps = 74/260 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCN-PIGSLNL-------QCNSE 72
G C CQ +G +CE+C YY + + C C C P S N + +
Sbjct: 1823 GICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQ 1882
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+CKPG TG +C+ C Y E+ CK CEC+ + ++ +CD+ G+C
Sbjct: 1883 IHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGSCDTRTGEC---- 1938
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--------PLGHGGSLNLQ-CNS 180
RC +T+ P +G ++ L+ C S
Sbjct: 1939 -----------------------------LRCLNNTFGAACNLCAPGFYGDAIKLKNCQS 1969
Query: 181 --------------EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
G C C V GD+CDRC +HY F GC++C+C G+ N+
Sbjct: 1970 CDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNST 2026
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD G C CK V G QC
Sbjct: 2027 QCDPHTGHCACKSGVTGRQC 2046
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 113/270 (41%), Gaps = 56/270 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G SN C +D+E+ NR G GG C +CQ + G NC KC+ YY+ G
Sbjct: 333 CNCHGHSNECKYDEEV-NRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKG 391
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
++ C+ C C+ S C E G C+C+ CD C +Y G C+ C
Sbjct: 392 KHWNETDVCSPCQCDYFFSTG-HCEEETGNCECRAAFQPPSCDSCAYGYY--GYPNCREC 448
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN G+ N +C++ GQ +++ G ++C
Sbjct: 449 ECNLNGT--NGYHCEAESGQQCPCKINFAGAY---------------------CKQCAEG 485
Query: 165 TYPLGH--------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
Y GS+ CN + G C+C GD C+RC H F C C+C
Sbjct: 486 YYGFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERC--KHGYFNYPTCSYCDC 543
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G+ C+ GQC C++ G +C
Sbjct: 544 DNQGTESEI--CNKQSGQCICREGFGGPRC 571
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C P V GD C++C N Y F + GC+ C CNP G CD G CEC+
Sbjct: 1432 TTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ 1491
Query: 239 NVEGAQC 245
N+EG C
Sbjct: 1492 NIEGRAC 1498
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+ C+ G C C
Sbjct: 1936 GECLRCLNNTFGAACNLCAPGFY---GDAIKLKNCQSCDCDDLGTQT--CDPFVGVCTCH 1990
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V GD+CDRC +HY F GC++C+C G+ N+ CD G C + + GR
Sbjct: 1991 ENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNSTQCDPHTGHC-ACKSGVTGR-- 2044
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCN-SEGRCQC 186
RC D + G S CN + G+CQC
Sbjct: 2045 -------------------QCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQC 2085
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PGV GD+CD C + GC+ C
Sbjct: 2086 LPGVIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C++C + YY G C AC CN IGS+ CN + G C+C GD C+
Sbjct: 470 CKINFAGAYCKQCAEGYY---GFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCE 526
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC H F C C+C+ G+ C+ GQC + R L
Sbjct: 527 RC--KHGYFNYPTCSYCDCDNQGTESEI--CNKQSGQCICREGFGGPRCDQCL------- 575
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P D + C GS + C++ G+C C G +C C +Y + +
Sbjct: 576 --PGFYNYPDCKPCN-----CSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPD 628
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C C+ GS + N D GQC C+ N +G QC S
Sbjct: 629 --CLPCHCDSHGSQGVSCNSD---GQCLCQPNFDGRQCDS 663
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 84/206 (40%), Gaps = 53/206 (25%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+ GS + +C+ G +CQCKP V C C +Y F + CK C+C N+
Sbjct: 1375 CNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPD--CKPCKC------PNS 1426
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY-------- 166
C+ G+C N I DL +C +TY
Sbjct: 1427 AMCEPTTGECMCPP-----------------------NVIGDLCEKCAPNTYGFHQVIGC 1463
Query: 167 ------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
P+G N QC+ G C+C+ + G CD C +++F C+ C C+ G
Sbjct: 1464 EECACNPMGIANG-NSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPH--CEQCSCHKPG 1520
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD + G C CK NV G C
Sbjct: 1521 TELEV--CDKIDGACFCKKNVVGRDC 1544
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL CQ + DG C+ C++ +Y NF C CNC+P G ++ C S C+
Sbjct: 648 GQCL-CQPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 701
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK VTG C+ C +++ + GC+ C+C G++ C S GQC + ++
Sbjct: 702 CKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQC-PCKPHTQ 760
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R FD ++ + C D GGS C+ G+C+C P +TG
Sbjct: 761 GRRCQECR---DGTFDLDSASLFGCKDCSCDV-----GGSWQSVCDKISGQCKCHPRITG 812
Query: 193 DKCDRCDVNHY 203
C + H+
Sbjct: 813 LACTQPLTTHF 823
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + C CR YY G C C C P ++ C + G C C P V
Sbjct: 1391 GGQC-QCKPNVIERTCGACRSRYY---GFPDCKPCKC-PNSAM---CEPTTGECMCPPNV 1442
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
GD C++C N Y F + GC+ C CNP G CD G CE Q + GR
Sbjct: 1443 IGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ-NIEGRA---- 1497
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDT--YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
D N ++ C++ + P G L + +G C CK V G CD+C
Sbjct: 1498 -------CDVCSNGYFNFPHCEQCSCHKP---GTELEVCDKIDGACFCKKNVVGRDCDQC 1547
Query: 199 DVNHYDFGEA---GCKSCEC 215
Y+ E+ GC +C C
Sbjct: 1548 VDGTYNLQESNPDGCTTCFC 1567
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H GHC C+ G C++C ++++ D CT CNCN S CN + G+CQC PG
Sbjct: 2031 HTGHCA-CKSGVTGRQCDRCAVDHWKYEKDG-CTPCNCNQGYSRGFGCNPNTGKCQCLPG 2088
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSC 104
V GD+CD C + GC+ C
Sbjct: 2089 VIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 41 CRDNYYQKS-----GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY- 94
R NY++++ D + T + + G+ Q + RC C PG +G C+ C +Y
Sbjct: 1737 IRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYR 1796
Query: 95 -DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G G C CECN ++ CD G C Q + G H E R S +
Sbjct: 1797 DPSGPYGGYCIPCECN-----GHSETCDCATGICSKCQHGTEGD-HCE-RCVSGYYGNAT 1849
Query: 152 GNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
D C D+ ++ + + C+CKPG TG +C+ C Y E
Sbjct: 1850 NGTPGDCMICACPLPFDSNNFATSCEIS-ESGDQIHCECKPGYTGPRCESCANGFYGEPE 1908
Query: 208 A---GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+ CK CEC+ + ++ +CD+ G+C C +N GA C
Sbjct: 1909 SIGQVCKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAAC 1950
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNV 240
G C+C+ CD C +Y G C+ CECN G+ N +C++ GQ C CK N
Sbjct: 419 GNCECRAAFQPPSCDSCAYGYY--GYPNCRECECNLNGT--NGYHCEAESGQQCPCKINF 474
Query: 241 EGAQCR 246
GA C+
Sbjct: 475 AGAYCK 480
>gi|427780831|gb|JAA55867.1| Putative laminin a [Rhipicephalus pulchellus]
Length = 545
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 126/307 (41%), Gaps = 86/307 (28%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC G S C++D++ ++ GG C +CQ + +G NC KC+ +Y+
Sbjct: 199 CNCFGHSEDCYYDEKVDEQQLSLNIHGIYDGGGVCRNCQHNTEGINCNKCKPGFYRPYNK 258
Query: 49 --SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD----------- 95
+ + C C C+ S G+C+C+P CD+C+V +Y
Sbjct: 259 ALNDTHVCQPCQCDLTYSSGNCSEGSGQCECRPEFLPPNCDQCNVGYYGYPSCRPCDCHA 318
Query: 96 ---------------------------------FGEAGCKSCECNPAGSVKNTPNCDSVK 122
+G CK C C+P ++ T CD
Sbjct: 319 EGTQGRVCQVNGGQCPCRPYYEGKNCDRCAPGYYGFPNCKPCNCDPTAALGRT--CDDTT 376
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR---DTYPLGHGGSLNLQCN 179
GQC+ + S GR E +V +D CK DT G+L+ CN
Sbjct: 377 GQCQ-CRNSYGGRQCLECQVG-----------FYDYPSCKLCACDT-----TGTLDDVCN 419
Query: 180 SE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
++ G+C CKP G +CD+C +Y F CK CEC+P GS+ CD+ G+C C
Sbjct: 420 NQTGQCLCKPEYGGARCDQCAPGYYGF--PNCKPCECDPKGSLSEV--CDA-SGKCPCLA 474
Query: 239 NVEGAQC 245
+ G QC
Sbjct: 475 SFTGLQC 481
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 28/227 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
+GG C C+ +G NC++C YY G C CNC+P +L C+ + G+CQC+
Sbjct: 329 NGGQC-PCRPYYEGKNCDRCAPGYY---GFPNCKPCNCDPTAALGRTCDDTTGQCQCRNS 384
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +C C V YD+ CK C C+ G++ + C++ GQC R
Sbjct: 385 YGGRQCLECQVGFYDY--PSCKLCACDTTGTLDDV--CNNQTGQCLCKPEYGGARC---- 436
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
P + + C+ D GSL+ C++ G+C C TG +CD+C
Sbjct: 437 -----DQCAPGYYGFPNCKPCECDP-----KGSLSEVCDASGKCPCLASFTGLQCDQCAP 486
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
++ + E C CEC+ G+V + D G C CK N +G +C S
Sbjct: 487 GYFSYPE--CHPCECDTYGAVGVSCGND---GICFCKPNFDGDKCNS 528
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ G C +C+ +Y C C C+ G+L+ CN++ G+C CKP G +CD
Sbjct: 381 CRNSYGGRQCLECQVGFYDYPS---CKLCACDTTGTLDDVCNNQTGQCLCKPEYGGARCD 437
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C +Y F CK CEC+P GS+ CD+ G+C L+S + +
Sbjct: 438 QCAPGYYGF--PNCKPCECDPKGSLSEV--CDA-SGKCPC--LASFTGLQCD-------Q 483
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF 205
P + C+ DTY G++ + C ++G C CKP GDKC+ C Y++
Sbjct: 484 CAPGYFSYPECHPCECDTY-----GAVGVSCGNDGICFCKPNFDGDKCNSCKKGFYNY 536
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 103/276 (37%), Gaps = 56/276 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG ++ C ++ + CQ G CE+C + QK N
Sbjct: 140 CVCNGHADTC----DITDPANTYKLSCQCQHHTCGHQCEQCCPGFTQKKWQRASIDNPNV 195
Query: 54 CTACNC----------NPIGSLNLQCNSEGRCQ-------CKPGVTGDKCDRCDVNHY-D 95
C CNC + L N G C+ G C++C Y
Sbjct: 196 CEPCNCFGHSEDCYYDEKVDEQQLSLNIHGIYDGGGVCRNCQHNTEGINCNKCKPGFYRP 255
Query: 96 FGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
+ +A C+ C+C+ S + NC GQCE E N D
Sbjct: 256 YNKALNDTHVCQPCQCDLTYS---SGNCSEGSGQCE---------CRPEFL---PPNCDQ 300
Query: 151 AGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG 209
+ C+ D + G G + Q N G+C C+P G CDRC +Y F
Sbjct: 301 CNVGYYGYPSCRPCDCHAEGTQGRV-CQVNG-GQCPCRPYYEGKNCDRCAPGYYGF--PN 356
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CK C C+P ++ T CD GQC+C+++ G QC
Sbjct: 357 CKPCNCDPTAALGRT--CDDTTGQCQCRNSYGGRQC 390
>gi|397758|gb|AAC37178.1| laminin A [Drosophila melanogaster]
Length = 3712
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ GS + CNS+G+C C+P G +CD
Sbjct: 606 NCLNNFAGKQCTLCTAGYYSYPD---CLPCHCDSHGSQGVSCNSDGQCLCQPNFDGRQCD 662
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 663 SCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECK----- 715
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G +L+ + G+C CKP G +C C
Sbjct: 716 ------PLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 769
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D A GCK C C+ GS ++ CD + GQC+C + G C
Sbjct: 770 GTFDLDSASLFGCKDCSCDVGGSWQSV--CDKISGQCKCHPRITGLAC 815
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 113/270 (41%), Gaps = 56/270 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G SN C +D+E+ NR G GG C +CQ + G NC KC+ YY+ G
Sbjct: 333 CNCHGHSNECKYDEEV-NRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKG 391
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
++ C+ C C+ S C E G C+C+ CD C +Y G C+ C
Sbjct: 392 KHWNETDVCSPCQCDYFFSTG-HCEEETGNCECRAAFQPPSCDSCAYGYY--GYPNCREC 448
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN G+ N +C++ GQ +++ G ++C
Sbjct: 449 ECNLNGT--NGYHCEAESGQQCPCKINFAGAY---------------------CKQCAEG 485
Query: 165 TYPLGH--------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
Y GS+ CN + G C+C GD C+RC H F C C+C
Sbjct: 486 YYGFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERC--KHGYFNYPTCSYCDC 543
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G+ C+ GQC C++ G +C
Sbjct: 544 DNQGTESEI--CNKQSGQCICREGFGGPRC 571
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 108/282 (38%), Gaps = 95/282 (33%)
Query: 22 HGGHCL-------------------DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNC 59
+GG+C+ CQ +G +CE+C YY + + C C C
Sbjct: 1802 YGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICAC 1861
Query: 60 N-PIGSLNL-------QCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECN 107
P S N + + C+CKPG TG +C+ C Y GE CK CEC+
Sbjct: 1862 PLPFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGEV-CKPCECS 1920
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY- 166
+ ++ +CD+ G+C RC +T+
Sbjct: 1921 GNINPEDQGSCDTRTGEC---------------------------------LRCLNNTFG 1947
Query: 167 -------PLGHGGSLNLQ-CNS--------------EGRCQCKPGVTGDKCDRCDVNHYD 204
P +G ++ L+ C S G C C V GD+CDRC +HY
Sbjct: 1948 AACNLCAPGFYGDAIKLKNCQSCDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYG 2007
Query: 205 FGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F GC++C+C G+ N+ CD G C CK V G QC
Sbjct: 2008 FESGVGCRACDC---GAASNSTQCDPHTGHCACKSGVTGRQC 2046
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 116/275 (42%), Gaps = 56/275 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCN-PIGSLNL-------QCNSE 72
G C CQ +G +CE+C YY + + C C C P S N + +
Sbjct: 1823 GICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQ 1882
Query: 73 GRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC--- 125
C+CKPG TG +C+ C Y GE CK CEC+ + ++ +CD+ G+C
Sbjct: 1883 IHCECKPGYTGPRCESCANGFYGEPESIGEV-CKPCECSGNINPEDQGSCDTRTGECLRC 1941
Query: 126 ------ESAQLSSRGRVHTELRVQS----------RKNFDPA-------GNRIWDL-RRC 161
+ L + G +++++ + DP N I D RC
Sbjct: 1942 LNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTQTCDPFVGVCTCHENVIGDRCDRC 2001
Query: 162 KRDTYPLGHG----------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
K D Y G S + QC+ G C CK GVTG +CDRC V+H+ + + GC
Sbjct: 2002 KPDHYGFESGVGCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGC 2061
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C CN S C+ G+C+C V G +C
Sbjct: 2062 TPCNCNQGYS--RGFGCNPNTGKCQCLPGVIGDRC 2094
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C P V GD C++C N Y F + GC+ C CNP G CD G CEC+
Sbjct: 1432 TTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ 1491
Query: 239 NVEGAQC 245
N+EG C
Sbjct: 1492 NIEGRAC 1498
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+ C+ G C C
Sbjct: 1936 GECLRCLNNTFGAACNLCAPGFY---GDAIKLKNCQSCDCDDLGTQT--CDPFVGVCTCH 1990
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V GD+CDRC +HY F GC++C+C G+ N+ CD G C + + GR
Sbjct: 1991 ENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNSTQCDPHTGHC-ACKSGVTGR-- 2044
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCN-SEGRCQC 186
RC D + G S CN + G+CQC
Sbjct: 2045 -------------------QCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQC 2085
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PGV GD+CD C + GC+ C
Sbjct: 2086 LPGVIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C++C + YY G C AC CN IGS+ CN + G C+C GD C+
Sbjct: 470 CKINFAGAYCKQCAEGYY---GFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCE 526
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC H F C C+C+ G+ C+ GQC + R L
Sbjct: 527 RC--KHGYFNYPTCSYCDCDNQGTESEI--CNKQSGQCICREGFGGPRCDQCL------- 575
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P D + C GS + C++ G+C C G +C C +Y + +
Sbjct: 576 --PGFYNYPDCKPCN-----CSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPD 628
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C C+ GS + N D GQC C+ N +G QC S
Sbjct: 629 --CLPCHCDSHGSQGVSCNSD---GQCLCQPNFDGRQCDS 663
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 84/206 (40%), Gaps = 53/206 (25%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+ GS + +C+ G +CQCKP V C C +Y F + CK C+C N+
Sbjct: 1375 CNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPD--CKPCKC------PNS 1426
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY-------- 166
C+ G+C N I DL +C +TY
Sbjct: 1427 AMCEPTTGECMCPP-----------------------NVIGDLCEKCAPNTYGFHQVIGC 1463
Query: 167 ------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
P+G N QC+ G C+C+ + G CD C +++F C+ C C+ G
Sbjct: 1464 EECACNPMGIANG-NSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPH--CEQCSCHKPG 1520
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD + G C CK NV G C
Sbjct: 1521 TELEV--CDKIDGACFCKKNVVGRDC 1544
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL CQ + DG C+ C++ +Y NF C CNC+P G ++ C S C+
Sbjct: 648 GQCL-CQPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 701
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK VTG C+ C +++ + GC+ C+C G++ C S GQC + ++
Sbjct: 702 CKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQC-PCKPHTQ 760
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R FD ++ + C D GGS C+ G+C+C P +TG
Sbjct: 761 GRRCQECR---DGTFDLDSASLFGCKDCSCDV-----GGSWQSVCDKISGQCKCHPRITG 812
Query: 193 DKCDRCDVNHY 203
C + H+
Sbjct: 813 LACTQPLTTHF 823
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + C CR YY G C C C P ++ C + G C C P V
Sbjct: 1391 GGQC-QCKPNVIERTCGACRSRYY---GFPDCKPCKC-PNSAM---CEPTTGECMCPPNV 1442
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
GD C++C N Y F + GC+ C CNP G CD G CE Q + GR
Sbjct: 1443 IGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ-NIEGRA---- 1497
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDT--YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
D N ++ C++ + P G L + +G C CK V G CD+C
Sbjct: 1498 -------CDVCSNGYFNFPHCEQCSCHKP---GTELEVCDKIDGACFCKKNVVGRDCDQC 1547
Query: 199 DVNHYDFGEA---GCKSCEC 215
Y+ E+ GC +C C
Sbjct: 1548 VDGTYNLQESNQDGCTTCFC 1567
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H GHC C+ G C++C ++++ D CT CNCN S CN + G+CQC PG
Sbjct: 2031 HTGHCA-CKSGVTGRQCDRCAVDHWKYEKDG-CTPCNCNQGYSRGFGCNPNTGKCQCLPG 2088
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSC 104
V GD+CD C + GC+ C
Sbjct: 2089 VIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 94/223 (42%), Gaps = 27/223 (12%)
Query: 41 CRDNYYQKS-----GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY- 94
R NY++++ D + T + + G+ Q + RC C PG +G C+ C +Y
Sbjct: 1737 IRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYR 1796
Query: 95 -DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G G C CECN ++ CD G C Q + G H E R S +
Sbjct: 1797 DPSGPYGGYCIPCECN-----GHSETCDCATGICSKCQHGTEGD-HCE-RCVSGYYGNAT 1849
Query: 152 GNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---- 203
D C D+ ++ + + C+CKPG TG +C+ C Y
Sbjct: 1850 NGTPGDCMICACPLPFDSNNFATSCEIS-ESGDQIHCECKPGYTGPRCESCANGFYGEPE 1908
Query: 204 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
GE CK CEC+ + ++ +CD+ G+C C +N GA C
Sbjct: 1909 SIGEV-CKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAAC 1950
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNV 240
G C+C+ CD C +Y G C+ CECN G+ N +C++ GQ C CK N
Sbjct: 419 GNCECRAAFQPPSCDSCAYGYY--GYPNCRECECNLNGT--NGYHCEAESGQQCPCKINF 474
Query: 241 EGAQCR 246
GA C+
Sbjct: 475 AGAYCK 480
>gi|224094402|ref|XP_002189547.1| PREDICTED: netrin-4 [Taeniopygia guttata]
Length = 629
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD +++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 333 CKCNGHADTCHFDVDVWLASGNRSGGVCDNCQHNTEGQHCQRCKLGFYRDLRKPFSAPDA 392
Query: 54 CTACNCNPIGSLNLQCN-------SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L S G C CKPGV G +CD C ++ FG GC+ C+C
Sbjct: 393 CKPCSCHPVGSAVLPLGPGTFCDPSTGDCPCKPGVAGPRCDHCLPGYWGFGPYGCRPCDC 452
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
+CD G C S+
Sbjct: 453 --------ARSCDPHTGDCHSS 466
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 165 TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
PLG G + S G C CKPGV G +CD C ++ FG GC+ C+C
Sbjct: 405 VLPLGPGTFCD---PSTGDCPCKPGVAGPRCDHCLPGYWGFGPYGCRPCDC 452
>gi|256080034|ref|XP_002576288.1| laminin beta chain-related [Schistosoma mansoni]
gi|350646049|emb|CCD59327.1| laminin beta chain-related [Schistosoma mansoni]
Length = 1753
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 101/231 (43%), Gaps = 46/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + CFF+ L++++G+ GG+C C + +G NCE C+ N+Y+
Sbjct: 334 CNCNNHATACFFNPVLFSKSGNVSGGNCHGCIHNTEGVNCEFCQPNFYRHPSYPIDHPLT 393
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C CNC+ G+L Q GRC CK V G+KCDRC V ++F G
Sbjct: 394 CQPCNCHLDGTLYDNFCQQYTIPEQNTIAGRCICKKNVGGEKCDRCKVGFWNFQAENPDG 453
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C CN G++ N CD G C R N D ++L
Sbjct: 454 CEACSCNMIGTIDNG-GCDPFTGLCICK------------RFVGGPNCDRCLEGYFNL-- 498
Query: 161 CKRDTYPLG-------HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
T PLG GSLN C G+C CK G TG C + +Y
Sbjct: 499 ---STTPLGCQECACSQIGSLNPNCERVSGQCACKVGFTGRDCSEVENGYY 546
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 122/264 (46%), Gaps = 45/264 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTA 56
C CN FS+ C N+T G C +C+ + G +CE CR+ +Y GD C
Sbjct: 809 CICNEFSDFC-------NQTT--GICENCRDNTGGDHCETCREGFY---GDPLRKTPCKP 856
Query: 57 CNCNPIGSLN------LQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECN 107
C+C P G LN + E C CK G TG +C +C +N++ + E G C+ CEC+
Sbjct: 857 CSC-PGGGLNHAKECHMGPLEEQICICKVGYTGPRCSQCAMNYFGNPTEPGGSCRQCECS 915
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW-DLRR--CKR- 163
+V +CD + GQC ++ G D + W D R C+
Sbjct: 916 GNIAVNVPGSCDPITGQCLKCLHNTEGYY-----------CDVCKDGFWGDATRQMCQPC 964
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
+ YPLG CN E G+C C P V G +C C ++ GC+ C C+P GS+
Sbjct: 965 NCYPLGSIDEGAGGCNRENGQCSCLPNVIGPRCYECAPYFFNLTSGKGCEPCLCDPTGSI 1024
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ CD V GQC CK + G +C
Sbjct: 1025 DDL--CDPVMGQCRCKPDRSGRRC 1046
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL---QCNSE-GRCQCKP 79
G CL C + +G C+ C+D ++ + C CNC P+GS++ CN E G+C C P
Sbjct: 931 GQCLKCLHNTEGYYCDVCKDGFWGDATRQMCQPCNCYPLGSIDEGAGGCNRENGQCSCLP 990
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G +C C ++ GC+ C C+P GS+ + CD V GQC S R
Sbjct: 991 NVIGPRCYECAPYFFNLTSGKGCEPCLCDPTGSIDDL--CDPVMGQCRCKPDRSGRRCD- 1047
Query: 139 ELRVQSRKNF--DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
Q R+ F DP C R G + +L G+C C+ G+TG +CD
Sbjct: 1048 ----QCRRLFYSDPTTPDRCLPCDCDR------VGSTSDLCDPLTGQCPCRTGITGQRCD 1097
Query: 197 RCD 199
RCD
Sbjct: 1098 RCD 1100
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 110/223 (49%), Gaps = 31/223 (13%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH 93
G C++C +Y S CT C C+P GS++LQC+ + C+C+PG+ G C+ C+
Sbjct: 742 GRQCDRCAPYHYGFSARG-CTDCACDPQGSVSLQCHEDTSLCECRPGIVGKHCNMCNPGF 800
Query: 94 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DPA 151
+DF C+ C CN C+ G CE+ + ++ G H E R+ F DP
Sbjct: 801 WDF--PNCRPCICNEFSDF-----CNQTTGICENCRDNTGGD-HCE---TCREGFYGDP- 848
Query: 152 GNRIWDLRR--CKRDTYP---LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DF 205
LR+ CK + P L H ++ E C CK G TG +C +C +N++ +
Sbjct: 849 ------LRKTPCKPCSCPGGGLNHAKECHMGPLEEQICICKVGYTGPRCSQCAMNYFGNP 902
Query: 206 GEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
E G C+ CEC+ +V +CD + GQC +C N EG C
Sbjct: 903 TEPGGSCRQCECSGNIAVNVPGSCDPITGQCLKCLHNTEGYYC 945
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 48 KSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
K + C CN GS + C+ G+C CK GV G +CDRC HY F GC C C
Sbjct: 706 KESSSVAQRCLCNSTGSRSEICDKLTGQCPCKDGVVGRQCDRCAPYHYGFSARGCTDCAC 765
Query: 107 NPAGSV 112
+P GSV
Sbjct: 766 DPQGSV 771
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
GRC CK V G+KCDRC V ++F GC++C CN G++ N CD G C CK
Sbjct: 423 GRCICKKNVGGEKCDRCKVGFWNFQAENPDGCEACSCNMIGTIDNG-GCDPFTGLCICKR 481
Query: 239 NVEGAQC 245
V G C
Sbjct: 482 FVGGPNC 488
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C CK V G CDRC +++ GC+ C C+ GS+ PNC+ V GQC CK
Sbjct: 475 GLCICKRFVGGPNCDRCLEGYFNLSTTPLGCQECACSQIGSLN--PNCERVSGQCACKVG 532
Query: 240 VEGAQC 245
G C
Sbjct: 533 FTGRDC 538
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 92/243 (37%), Gaps = 54/243 (22%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEGRC--------QCK 78
C+ GP C +C NY+ + C C C S N+ N G C +C
Sbjct: 882 CKVGYTGPRCSQCAMNYFGNPTEPGGSCRQCEC----SGNIAVNVPGSCDPITGQCLKCL 937
Query: 79 PGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSV-KNTPNCDSVKGQCESAQLSSRGRV 136
G CD C + D C+ C C P GS+ + C+ GQC
Sbjct: 938 HNTEGYYCDVCKDGFWGDATRQMCQPCNCYPLGSIDEGAGGCNRENGQCSCLP------- 990
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNS-EGRC 184
+ G R ++ C + L G GS++ C+ G+C
Sbjct: 991 ------------NVIGPRCYE---CAPYFFNLTSGKGCEPCLCDPTGSIDDLCDPVMGQC 1035
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+CKP +G +CD+C Y C C+C+ GS + CD + GQC C+ + G
Sbjct: 1036 RCKPDRSGRRCDQCRRLFYSDPTTPDRCLPCDCDRVGSTSDL--CDPLTGQCPCRTGITG 1093
Query: 243 AQC 245
+C
Sbjct: 1094 QRC 1096
>gi|195377056|ref|XP_002047308.1| GJ12003 [Drosophila virilis]
gi|194154466|gb|EDW69650.1| GJ12003 [Drosophila virilis]
Length = 3723
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 135/301 (44%), Gaps = 74/301 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G SN C +D+++ NR G GG C +CQ + +G NC KC+ YY+ G
Sbjct: 337 CNCHGHSNECIYDEDV-NRKGLSLDIHGHYDGGGVCQNCQHNTEGTNCNKCKPKYYRPRG 395
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
+ C+ CNC+ S C E G+C+C+ CD C +Y G C+ C
Sbjct: 396 KYWNETDVCSPCNCDYFYSTG-HCEEETGKCECRAAFQPPNCDSCSYGYY--GYPQCREC 452
Query: 105 ECNPAGSVKNTPNCDSVKG------------------------QCESAQLSSRGRVHTEL 140
ECN G+ N NC++V G +C++ Q + G ++ +
Sbjct: 453 ECNLNGT--NGYNCEAVNGICPCKTNFAGALCKECAESYYGFPECKACQCNKLGSINNDC 510
Query: 141 RVQSRKNFDPAGN----RIWDLRRCKR--DTY---PL------GHGGSLNLQCNSE-GRC 184
V S GN W +C+R D Y P H G+ + CN E G+C
Sbjct: 511 DVVS-------GNCTCLSNWGGAQCERCKDGYYNEPTCSYCDCDHQGTESEICNKESGQC 563
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
C+ G G +CDRC +Y++ C+ C C+ GS +T CD+ G+C C N G
Sbjct: 564 ICRDGFGGPRCDRCLPGYYNY--PSCQPCNCSTTGSSAST--CDNT-GKCNCLINYSGKL 618
Query: 245 C 245
C
Sbjct: 619 C 619
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 97/228 (42%), Gaps = 29/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C CNC+ GS + CN +G C CKP G +C+
Sbjct: 609 NCLINYSGKLCNMCSAGYYNYPE---CLPCNCDEHGSEGVTCNEDG-CFCKPNFDGRQCE 664
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
RC + Y+F C+ C C+PAG + C SV G+ + RGR+ E +
Sbjct: 665 RCKESFYNF--PACEDCNCDPAGVIDQFAGCGSVPVGELCKCKERVRGRICNECK----- 717
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G L+ + G C CKP TG +C+ C
Sbjct: 718 ------PLYWNLTVSNPEGCQECDCFIDGTVSGLDTCASKLGNCHCKPHTTGRRCNECKD 771
Query: 201 NHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D GCK C C+ GS K+ C+ + GQC C V G C
Sbjct: 772 GTFDLDGSSLFGCKDCSCDVGGSWKS--ECNKISGQCNCHPRVTGRAC 817
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 109/256 (42%), Gaps = 61/256 (23%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSEGR 74
+ +G HC DC GP CE C + +Y + GD C C C S N+ N G
Sbjct: 1878 SESGDKIHC-DCLPGYTGPRCESCANGFYGSPETQGD-VCKPCEC----SGNINPNEPGS 1931
Query: 75 CQCKPG--------VTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVK 122
C + G +G C+ C Y G+A C+SC+C+ G+++ CD
Sbjct: 1932 CDTRTGECLRCLNNTSGMACNLCAPGFY--GDAVQLKNCQSCDCDELGTLE----CDPFV 1985
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------G 172
G+C + H + G R RCK D Y G
Sbjct: 1986 GKC---------KCHDNV----------IGER---CDRCKPDHYGFDSGVGCRACDCGAA 2023
Query: 173 SLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S + QC+ G C CKPGVTG +CDRC V+H+++ + GC C CN S T C+
Sbjct: 2024 SNSTQCDDHTGHCLCKPGVTGRQCDRCTVDHWNYEKEGCSPCNCNQGYSRAGT-GCNPQT 2082
Query: 232 GQCECKDNVEGAQCRS 247
GQC C V G +C +
Sbjct: 2083 GQCVCLPGVIGDRCEA 2098
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 110/260 (42%), Gaps = 51/260 (19%)
Query: 22 HGGHCL-------------------DCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC 59
+GG+C+ DCQ G +CE+C YY + + C C+C
Sbjct: 1803 YGGYCIPCECNGHADTCDCATGICKDCQHSTRGDHCEECVAGYYGNATRGTPHDCIICSC 1862
Query: 60 N-PIGSLNL-------QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNP 108
P S N + + C C PG TG +C+ C Y E CK CEC+
Sbjct: 1863 PLPFDSNNFATGCEISESGDKIHCDCLPGYTGPRCESCANGFYGSPETQGDVCKPCECSG 1922
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
+ +CD+ G+C ++ G F G+ + L+ C+ D
Sbjct: 1923 NINPNEPGSCDTRTGECLRCLNNTSGMACN----LCAPGF--YGDAV-QLKNCQSCDCDE 1975
Query: 168 LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
LG L+C+ G+C+C V G++CDRC +HY F GC++C+C G+ N+
Sbjct: 1976 LG-----TLECDPFVGKCKCHDNVIGERCDRCKPDHYGFDSGVGCRACDC---GAASNST 2027
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD G C CK V G QC
Sbjct: 2028 QCDDHTGHCLCKPGVTGRQC 2047
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 41/204 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+L +C+ G+C+C
Sbjct: 1937 GECLRCLNNTSGMACNLCAPGFY---GDAVQLKNCQSCDCDELGTL--ECDPFVGKCKCH 1991
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G++CDRC +HY F GC++C+C G+ N+ CD G C + GR
Sbjct: 1992 DNVIGERCDRCKPDHYGFDSGVGCRACDC---GAASNSTQCDDHTGHC-LCKPGVTGRQC 2047
Query: 138 TELRVQSRKNFDPAGNRIWDLRR-------CKRDTYPLGHGGSLNLQCNSE-GRCQCKPG 189
V W+ + C + G G CN + G+C C PG
Sbjct: 2048 DRCTVDH-----------WNYEKEGCSPCNCNQGYSRAGTG------CNPQTGQCVCLPG 2090
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSC 213
V GD+C+ C N + E GC C
Sbjct: 2091 VIGDRCEACP-NRWVLTEDGCMEC 2113
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 179 NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECK 237
++ G C C P V G CD+C + Y F + GC+ C CN G CD G CEC+
Sbjct: 1432 STTGECMCPPNVIGALCDKCAPHTYGFHQVIGCEECNCNYMGIANGNQQCDMFNGSCECR 1491
Query: 238 DNVEGAQC 245
DN+ G C
Sbjct: 1492 DNIVGRAC 1499
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN--LQCNSEG---RCQCKPGVTG 83
C+ + DG CE+C++++Y C CNC+P G ++ C S C+CK V G
Sbjct: 654 CKPNFDGRQCERCKESFYNFPA---CEDCNCDPAGVIDQFAGCGSVPVGELCKCKERVRG 710
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
C+ C +++ + GC+ C+C G+V C S G C + + GR E
Sbjct: 711 RICNECKPLYWNLTVSNPEGCQECDCFIDGTVSGLDTCASKLGNCH-CKPHTTGRRCNEC 769
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCD 199
+ FD G+ ++ + C D GGS +CN G+C C P VTG C +
Sbjct: 770 K---DGTFDLDGSSLFGCKDCSCDV-----GGSWKSECNKISGQCNCHPRVTGRACTQPL 821
Query: 200 VNHY 203
HY
Sbjct: 822 TTHY 825
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 91/214 (42%), Gaps = 35/214 (16%)
Query: 41 CRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
C++ + + D N C+C+ GS + +C+ G +CQC+ V G +C C +Y F
Sbjct: 1358 CKNAVFSLTADYNNGALPCSCDYGGSTSFECHPFGGQCQCRKNVIGRQCTACRTGYYGFP 1417
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCE-----SAQLSSRGRVHTELRVQSRKNFDPAG 152
+ CK C+C +T C+S G+C L + HT
Sbjct: 1418 D--CKPCDC------PSTAMCESTTGECMCPPNVIGALCDKCAPHTY-----------GF 1458
Query: 153 NRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
+++ C + + +G N QC+ G C+C+ + G CD C Y+F C
Sbjct: 1459 HQVIGCEECNCNYMGIANG---NQQCDMFNGSCECRDNIVGRACDGCAHGFYEFPR--CS 1513
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+ G+ CD + G C CK NV G C
Sbjct: 1514 RCSCHKPGTELEV--CDKIDGSCFCKKNVVGRDC 1545
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 81/204 (39%), Gaps = 38/204 (18%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ + G C CR YY G C C+C S + ++ G C C P V
Sbjct: 1392 GGQC-QCRKNVIGRQCTACRTGYY---GFPDCKPCDC---PSTAMCESTTGECMCPPNVI 1444
Query: 83 GDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G CD+C + Y F + GC+ C CN G CD G CE
Sbjct: 1445 GALCDKCAPHTYGFHQVIGCEECNCNYMGIANGNQQCDMFNGSCE--------------- 1489
Query: 142 VQSRKNF-----DPAGNRIWDLRRCKRDT--YPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R N D + ++ RC R + P G L + +G C CK V G
Sbjct: 1490 --CRDNIVGRACDGCAHGFYEFPRCSRCSCHKP---GTELEVCDKIDGSCFCKKNVVGRD 1544
Query: 195 CDRCDVNHYDFGEA---GCKSCEC 215
CD+C Y+ ++ GC +C C
Sbjct: 1545 CDQCVEGTYNLQDSNPDGCTTCFC 1568
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+ CD C +Y G C+ CECN G+ N NC++V G C CK N
Sbjct: 423 GKCECRAAFQPPNCDSCSYGYY--GYPQCRECECNLNGT--NGYNCEAVNGICPCKTNFA 478
Query: 242 GAQCR 246
GA C+
Sbjct: 479 GALCK 483
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNY--YQKSGDNFCTACNCNP-IGSLNLQCNSE-GRCQC 77
H GHCL C+ G C++C ++ Y+K G C+ CNCN CN + G+C C
Sbjct: 2032 HTGHCL-CKPGVTGRQCDRCTVDHWNYEKEG---CSPCNCNQGYSRAGTGCNPQTGQCVC 2087
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSC 104
PGV GD+C+ C N + E GC C
Sbjct: 2088 LPGVIGDRCEACP-NRWVLTEDGCMEC 2113
>gi|194867588|ref|XP_001972103.1| GG14069 [Drosophila erecta]
gi|190653886|gb|EDV51129.1| GG14069 [Drosophila erecta]
Length = 3725
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ GS + CN++G+C C+P G +CD
Sbjct: 606 NCLNNFAGKQCTLCTAGYYSYPD---CLPCHCDTYGSQGVSCNADGQCLCQPNFDGRQCD 662
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 663 SCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECK----- 715
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G +L+ + G+C CKP G +C C
Sbjct: 716 ------PLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 769
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D A GCK C C+ GS ++ CD + GQC+C + G C
Sbjct: 770 GTFDLDSASLFGCKDCSCDVGGSWQSV--CDKISGQCKCHPRITGLAC 815
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 112/270 (41%), Gaps = 56/270 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G S C +D+E+ NR G GG C +CQ + G NC KC+ YY+ G
Sbjct: 333 CNCHGHSTECKYDEEV-NRKGLSLDIHGHYDGGGVCQNCQHNTVGTNCNKCKPKYYRPKG 391
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
++ C+ C C+ S C E G C+C+ CD C +Y G C+ C
Sbjct: 392 KHWNETDVCSPCQCDYFFSTG-HCEEETGNCECRAAFQPPSCDSCAYGYY--GYPNCREC 448
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN G+ N +C++ GQ +++ G ++C
Sbjct: 449 ECNLNGT--NGYHCEAESGQQCPCKINFAGAY---------------------CKQCAEG 485
Query: 165 TYPLGH--------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
Y GS+ CN + G C+C GD C+RC H F C C+C
Sbjct: 486 YYGFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERC--KHGYFNYPTCSYCDC 543
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G+ C+ GQC C++ G +C
Sbjct: 544 DNQGTESEI--CNKQSGQCICREGFGGPRC 571
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 87/207 (42%), Gaps = 47/207 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+L +C+ G C C
Sbjct: 1936 GECLRCLNNTSGAACNLCAPGFY---GDAIKLKNCQSCDCDDLGTL--ECDPFVGVCTCH 1990
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G++CDRC +HY F GC++C+C G+ N+ CD G C + + GR
Sbjct: 1991 ENVIGERCDRCKPDHYGFESGVGCRACDC---GAASNSTQCDPHTGHC-ACKSGVTGR-- 2044
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCN-SEGRCQC 186
RC D + G S CN + G+CQC
Sbjct: 2045 -------------------QCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQC 2085
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PGV GD+CD C + GC+ C
Sbjct: 2086 LPGVIGDRCDACPNRWVLLKDDGCQEC 2112
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 113/261 (43%), Gaps = 53/261 (20%)
Query: 22 HGGHCL-------------------DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNC 59
+GG+C+ +CQ G +CE+C YY + + C C C
Sbjct: 1802 YGGYCIPCECNGHSETCDCATGICSNCQHGTQGEHCEQCVSGYYGNATNGTPGDCMICAC 1861
Query: 60 N-PIGSLNL-------QCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECN 107
P S N + + C+CKPG TG +C+ C Y + GE CK CEC+
Sbjct: 1862 PLPFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGQPENMGEV-CKPCECS 1920
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTY 166
+ ++ +CD+ G+C ++ G F G+ I L+ C+ D
Sbjct: 1921 GNINPEDQGSCDTRTGECLRCLNNTSGAACN----LCAPGF--YGDAI-KLKNCQSCDCD 1973
Query: 167 PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT 224
LG L+C+ G C C V G++CDRC +HY F GC++C+C G+ N+
Sbjct: 1974 DLG-----TLECDPFVGVCTCHENVIGERCDRCKPDHYGFESGVGCRACDC---GAASNS 2025
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD G C CK V G QC
Sbjct: 2026 TQCDPHTGHCACKSGVTGRQC 2046
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 116/275 (42%), Gaps = 56/275 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCN-PIGSLNL-------QCNSE 72
G C +CQ G +CE+C YY + + C C C P S N + +
Sbjct: 1823 GICSNCQHGTQGEHCEQCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQ 1882
Query: 73 GRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC--- 125
C+CKPG TG +C+ C Y + GE CK CEC+ + ++ +CD+ G+C
Sbjct: 1883 IHCECKPGYTGPRCESCANGFYGQPENMGEV-CKPCECSGNINPEDQGSCDTRTGECLRC 1941
Query: 126 ------ESAQLSSRGRVHTELRVQS----------RKNFDPA-------GNRIWDL-RRC 161
+ L + G +++++ DP N I + RC
Sbjct: 1942 LNNTSGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTLECDPFVGVCTCHENVIGERCDRC 2001
Query: 162 KRDTYPLGHG----------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
K D Y G S + QC+ G C CK GVTG +CDRC V+H+ + + GC
Sbjct: 2002 KPDHYGFESGVGCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGC 2061
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C CN S C+ G+C+C V G +C
Sbjct: 2062 TPCNCNQGYS--RGFGCNPNTGKCQCLPGVIGDRC 2094
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
S G C C P V GD C++C N Y F + GC+ C CNP G CD G C C++
Sbjct: 1432 STGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCTCRE 1491
Query: 239 NVEGAQC 245
N+EG C
Sbjct: 1492 NIEGRAC 1498
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C++C + YY G C AC CN IGS+ CN + G C+C GD C+
Sbjct: 470 CKINFAGAYCKQCAEGYY---GFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCE 526
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC H F C C+C+ G+ C+ GQC + R L
Sbjct: 527 RC--KHGYFNYPTCSYCDCDNQGTESEI--CNKQSGQCICREGFGGPRCDQCL------- 575
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P D + C GS + C++ G+C C G +C C +Y + +
Sbjct: 576 --PGFYNYPDCKPCN-----CSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPD 628
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C C+ GS + N D GQC C+ N +G QC S
Sbjct: 629 --CLPCHCDTYGSQGVSCNAD---GQCLCQPNFDGRQCDS 663
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 84/206 (40%), Gaps = 53/206 (25%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+ GS + +C+ G +CQCKP V C C +Y F + CK C+C N+
Sbjct: 1375 CNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPD--CKPCKC------PNS 1426
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY-------- 166
C+ G+C N I DL +C +TY
Sbjct: 1427 AMCEPSTGECMCPP-----------------------NVIGDLCEKCAPNTYGFHQVIGC 1463
Query: 167 ------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
P+G N QC+ G C C+ + G CD C +++F C+ C C+ G
Sbjct: 1464 EECACNPMGIANG-NSQCDLFNGTCTCRENIEGRACDVCSNGYFNFPH--CEQCSCHKPG 1520
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD V G+C CK NV G C
Sbjct: 1521 TELEV--CDKVDGECFCKKNVVGRDC 1544
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 85/200 (42%), Gaps = 30/200 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + C CR YY G C C C P ++ C S G C C P V
Sbjct: 1391 GGQC-QCKPNVIERTCGACRSRYY---GFPDCKPCKC-PNSAM---CEPSTGECMCPPNV 1442
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
GD C++C N Y F + GC+ C CNP G CD G C + + + GR
Sbjct: 1443 IGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTC-TCRENIEGRA---- 1497
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDT--YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
D N ++ C++ + P G L + +G C CK V G CD+C
Sbjct: 1498 -------CDVCSNGYFNFPHCEQCSCHKP---GTELEVCDKVDGECFCKKNVVGRDCDQC 1547
Query: 199 DVNHYDFGEA---GCKSCEC 215
D Y+ E+ GC +C C
Sbjct: 1548 DDGTYNLQESNPEGCTTCFC 1567
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL CQ + DG C+ C++ +Y NF C CNC+P G ++ C S C+
Sbjct: 648 GQCL-CQPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 701
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK VTG C+ C +++ + GC+ C+C G++ C S GQC + ++
Sbjct: 702 CKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQC-PCKPHTQ 760
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R FD ++ + C D GGS C+ G+C+C P +TG
Sbjct: 761 GRRCQECR---DGTFDLDSASLFGCKDCSCDV-----GGSWQSVCDKISGQCKCHPRITG 812
Query: 193 DKCDRCDVNHY 203
C + H+
Sbjct: 813 LACTQPLTTHF 823
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H GHC C+ G C++C ++++ D CT CNCN S CN + G+CQC PG
Sbjct: 2031 HTGHCA-CKSGVTGRQCDRCAVDHWKYEKDG-CTPCNCNQGYSRGFGCNPNTGKCQCLPG 2088
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSC 104
V GD+CD C + GC+ C
Sbjct: 2089 VIGDRCDACPNRWVLLKDDGCQEC 2112
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 41 CRDNYYQKS-----GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY- 94
R NY++++ D + T + + G+ + + RC C PG +G C+ C +Y
Sbjct: 1737 IRANYWEQTLVTHLSDVYLTLADEDEDGTGKYELLAVERCSCPPGYSGHSCEDCAPGYYR 1796
Query: 95 -DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G G C CECN ++ CD G C + Q ++G H E V
Sbjct: 1797 DPSGPYGGYCIPCECN-----GHSETCDCATGICSNCQHGTQGE-HCEQCVSGYYGNATN 1850
Query: 152 GNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---- 203
G D C D+ ++ + + C+CKPG TG +C+ C Y
Sbjct: 1851 GTP-GDCMICACPLPFDSNNFATSCEIS-ESGDQIHCECKPGYTGPRCESCANGFYGQPE 1908
Query: 204 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+ GE CK CEC+ + ++ +CD+ G+C C +N GA C
Sbjct: 1909 NMGEV-CKPCECSGNINPEDQGSCDTRTGECLRCLNNTSGAAC 1950
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNV 240
G C+C+ CD C +Y G C+ CECN G+ N +C++ GQ C CK N
Sbjct: 419 GNCECRAAFQPPSCDSCAYGYY--GYPNCRECECNLNGT--NGYHCEAESGQQCPCKINF 474
Query: 241 EGAQCR 246
GA C+
Sbjct: 475 AGAYCK 480
>gi|195337897|ref|XP_002035562.1| GM13851 [Drosophila sechellia]
gi|194128655|gb|EDW50698.1| GM13851 [Drosophila sechellia]
Length = 3694
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ GS + CNS+G+C C+P G +CD
Sbjct: 589 NCLNNFAGKQCTLCTAGYYSYPD---CLPCHCDSHGSQGVSCNSDGQCLCQPNFDGRQCD 645
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 646 SCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECK----- 698
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G +L+ + G+C CKP G +C C
Sbjct: 699 ------PLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 752
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D A GCK C C+ GS ++ CD + GQC+C + G C
Sbjct: 753 GTFDLDSASLFGCKDCSCDVGGSWQSV--CDKISGQCKCHPRITGLAC 798
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 113/270 (41%), Gaps = 56/270 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G SN C +D+E+ NR G GG C +CQ + G NC KC+ YY+
Sbjct: 316 CNCHGHSNECKYDEEV-NRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKE 374
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
++ C+ C C+ S C E G C+C+ CD C +Y G C+ C
Sbjct: 375 KHWNETDVCSPCQCDYFFSTG-HCEEETGNCECRAAFQPPSCDSCAYGYY--GYPNCREC 431
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN G+ N +C++ GQ + + NF A ++C
Sbjct: 432 ECNLNGT--NGYHCEAESGQ----------------QCPCKINFAGAY-----CKQCAEG 468
Query: 165 TYPLGH--------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
Y GS+ CN + G C+C GD C+RC H F C C+C
Sbjct: 469 YYGFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERC--KHGYFNYPTCSYCDC 526
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G+ C+ GQC C++ G +C
Sbjct: 527 DNQGTESEI--CNKQSGQCICREGFGGPRC 554
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 102/260 (39%), Gaps = 74/260 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCN-PIGSLNL-------QCNSE 72
G C CQ +G +C++C YY + + C C C P S N + +
Sbjct: 1806 GICSKCQHGTEGDHCDRCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQ 1865
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+CKPG TG C+ C Y E+ CK CEC+ + ++ +CD+ G+C
Sbjct: 1866 IHCECKPGYTGPVCESCANGFYGEPESIGQVCKPCECSGNINPEDQGSCDTRTGEC---- 1921
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--------PLGHGGSLNLQ-CNS 180
C +T+ P +G ++ L+ C S
Sbjct: 1922 -----------------------------LLCLNNTFGAACNLCAPGFYGDAIKLKNCQS 1952
Query: 181 --------------EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
G C C V GD+CDRC +HY F GC++C+C G+ N+
Sbjct: 1953 CDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNSS 2009
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD G C CK V G QC
Sbjct: 2010 QCDPHTGHCACKSGVTGRQC 2029
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C P V GD C++C N Y F + GC+ C CNP G CD G CEC+
Sbjct: 1415 TTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ 1474
Query: 239 NVEGAQC 245
N+EG C
Sbjct: 1475 NIEGRAC 1481
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+ C+ G C C
Sbjct: 1919 GECLLCLNNTFGAACNLCAPGFY---GDAIKLKNCQSCDCDDLGTQT--CDPFVGVCTCH 1973
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V GD+CDRC +HY F GC++C+C G+ N+ CD G C + + GR
Sbjct: 1974 ENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNSSQCDPHTGHC-ACKSGVTGR-- 2027
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCN-SEGRCQC 186
RC D + G S CN + G+CQC
Sbjct: 2028 -------------------QCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQC 2068
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PGV GD+CD C + GC+ C
Sbjct: 2069 LPGVIGDRCDACPNRWVLIKDEGCQEC 2095
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C++C + YY G C AC CN IGS+ CN + G C+C GD C+
Sbjct: 453 CKINFAGAYCKQCAEGYY---GFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCE 509
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC H F C C+C+ G+ C+ GQC + R L
Sbjct: 510 RC--KHGYFNYPTCSYCDCDNQGTESEI--CNKQSGQCICREGFGGPRCDQCL------- 558
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P D + C GS + C++ G+C C G +C C +Y + +
Sbjct: 559 --PGFYNYPDCKPCN-----CSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPD 611
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C C+ GS + N D GQC C+ N +G QC S
Sbjct: 612 --CLPCHCDSHGSQGVSCNSD---GQCLCQPNFDGRQCDS 646
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 84/206 (40%), Gaps = 53/206 (25%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+ GS + +C+ G +CQCKP V C C +Y F + CK C+C N+
Sbjct: 1358 CNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPD--CKPCKC------PNS 1409
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY-------- 166
C+ G+C N I DL +C +TY
Sbjct: 1410 AMCEPTTGECMCPP-----------------------NVIGDLCEKCAPNTYGFHQVIGC 1446
Query: 167 ------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
P+G N QC+ G C+C+ + G CD C +++F C+ C C+ G
Sbjct: 1447 EECACNPMGIANG-NSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPH--CEQCSCHKPG 1503
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD + G C CK NV G C
Sbjct: 1504 AELEV--CDKIDGACFCKKNVVGRDC 1527
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + C CR YY G C C C P ++ C + G C C P V
Sbjct: 1374 GGQC-QCKPNVIERTCGACRSRYY---GFPDCKPCKC-PNSAM---CEPTTGECMCPPNV 1425
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
GD C++C N Y F + GC+ C CNP G CD G CE Q + GR
Sbjct: 1426 IGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ-NIEGRA---- 1480
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDT--YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
D N ++ C++ + P G L + +G C CK V G CD+C
Sbjct: 1481 -------CDVCSNGYFNFPHCEQCSCHKP---GAELEVCDKIDGACFCKKNVVGRDCDQC 1530
Query: 199 DVNHYDFGEA---GCKSCEC 215
Y+ E+ GC +C C
Sbjct: 1531 VDGTYNLQESNPDGCTTCFC 1550
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL CQ + DG C+ C++ +Y NF C CNC+P G ++ C S C+
Sbjct: 631 GQCL-CQPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 684
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK VTG C+ C +++ + GC+ C+C G++ C S GQC + ++
Sbjct: 685 CKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQC-PCKPHTQ 743
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R FD ++ + C D GGS C+ G+C+C P +TG
Sbjct: 744 GRRCQECR---DGTFDLDSASLFGCKDCSCDV-----GGSWQSVCDKISGQCKCHPRITG 795
Query: 193 DKCDRCDVNHY 203
C + H+
Sbjct: 796 LACTQPLTTHF 806
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H GHC C+ G C++C ++++ D CT CNCN S CN + G+CQC PG
Sbjct: 2014 HTGHCA-CKSGVTGRQCDRCAVDHWKYEKDG-CTPCNCNQGYSRGFGCNPNTGKCQCLPG 2071
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSC 104
V GD+CD C + GC+ C
Sbjct: 2072 VIGDRCDACPNRWVLIKDEGCQEC 2095
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNV 240
G C+C+ CD C +Y G C+ CECN G+ N +C++ GQ C CK N
Sbjct: 402 GNCECRAAFQPPSCDSCAYGYY--GYPNCRECECNLNGT--NGYHCEAESGQQCPCKINF 457
Query: 241 EGAQCR 246
GA C+
Sbjct: 458 AGAYCK 463
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 25/222 (11%)
Query: 41 CRDNYYQKS-----GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY- 94
R NY++++ D + T + + G+ Q + RC C PG +G C+ C +Y
Sbjct: 1720 IRANYWEQTLVTHLADVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYR 1779
Query: 95 -DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G G C CECN ++ CD G C Q + G H + R S +
Sbjct: 1780 DPSGPYGGYCIPCECN-----GHSETCDCATGICSKCQHGTEGD-HCD-RCVSGYYGNAT 1832
Query: 152 GNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
D C D+ ++ + + C+CKPG TG C+ C Y E
Sbjct: 1833 NGTPGDCMICACPLPFDSNNFATSCEIS-ESGDQIHCECKPGYTGPVCESCANGFYGEPE 1891
Query: 208 A---GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+ CK CEC+ + ++ +CD+ G+C C +N GA C
Sbjct: 1892 SIGQVCKPCECSGNINPEDQGSCDTRTGECLLCLNNTFGAAC 1933
>gi|390351676|ref|XP_796271.3| PREDICTED: laminin subunit alpha-5-like, partial [Strongylocentrotus
purpuratus]
Length = 1195
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 122/295 (41%), Gaps = 65/295 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGD-NFCTAC 57
CNCNG ++RC G CL+C + G CE C++ YY SGD + C C
Sbjct: 888 CNCNGHASRC---------DSKTGQCLECDHNTVGDQCESCKEGYYGDAPSGDPDACKIC 938
Query: 58 NC-NPIGSLNLQCN------SEGRCQCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNP 108
+C PI + N + C C+PG TG CD+C +Y C+ C+C+
Sbjct: 939 SCPQPIENQNFAVTCTFSPQGDQFCICQPGHTGQYCDQCVQGYYGNPLQGQACRRCDCSG 998
Query: 109 -AGSVKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQSRK------------- 146
CD G C + + ++GR + + RVQS +
Sbjct: 999 NTDPTTGLAECDQSSGNCTNCVVQTKGRSCEDCNDWYYGDARVQSCQACSCDRCGSDSCD 1058
Query: 147 NFDPAGN-----RIWDLRRCKRDTYPLG----------HGGSLNLQCNSE-GRCQCKPGV 190
NF+ N +D RC+ + G+++ QC+ E G+C C PGV
Sbjct: 1059 NFNGVCNCRPNVVGYDCERCQVGYWNFDSCSGCLPCDCSLGAVDSQCDMETGQCTCMPGV 1118
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GDKCD C ++++G GC C C+P CD G+C C G C
Sbjct: 1119 GGDKCDACLHGYWNYGPNGCYECNCDPK------LRCDPYTGECLCPPGAMGENC 1167
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 23/190 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G+C +C G +CE C D YY + C AC+C+ GS + N G C C+P V G
Sbjct: 1014 GNCTNCVVQTKGRSCEDCNDWYYGDARVQSCQACSCDRCGSDSCD-NFNGVCNCRPNVVG 1072
Query: 84 DKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
C+RC V +++F +GC C+C+ G+V + CD GQC + G + +
Sbjct: 1073 YDCERCQVGYWNFDSCSGCLPCDCS-LGAVDS--QCDMETGQCTC--MPGVGGDKCDACL 1127
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
N+ P G C D L+C+ G C C PG G+ CD+C+ +
Sbjct: 1128 HGYWNYGPNG-----CYECNCDP---------KLRCDPYTGECLCPPGAMGENCDQCE-D 1172
Query: 202 HYDFGEAGCK 211
Y E GC+
Sbjct: 1173 RYILTEQGCQ 1182
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 41/233 (17%)
Query: 32 DRDGPNCEKCR--DNYYQKSGDNFC---------------TACNCNPIGSLNLQCNSEG- 73
DR G + C D Y+ FC + C+C+ GSL+ C+ G
Sbjct: 423 DRAGEFIQYCSANDFYFSPDSSGFCREAVFSLSSAFNYGASECDCDSQGSLSFNCDELGG 482
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
+C C+ + G +C++C V +YDF C++C C C+ V G+C + +
Sbjct: 483 QCNCRQNIVGRRCNKCAVGYYDF--PYCRACTCESG-------VCNEVSGECICPE--NV 531
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
+ + + P I C+ D + + +L C+ G C CKP + G
Sbjct: 532 AGTNCDTCAPQTYGYHP----IVGCVDCECDIRGVDNN---DLNCDFFTGECNCKPNIGG 584
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+RC+ +Y G C+ C C+ G+ + CD QC CKDNV G QC
Sbjct: 585 RQCERCERGNY--GYPYCEPCNCDVNGTTEEI--CDQTTAQCLCKDNVYGDQC 633
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C C V G CD C Y + GC CEC+ G N NCD G+C CK N+
Sbjct: 523 GECICPENVAGTNCDTCAPQTYGYHPIVGCVDCECDIRGVDNNDLNCDFFTGECNCKPNI 582
Query: 241 EGAQCR 246
G QC
Sbjct: 583 GGRQCE 588
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 82/207 (39%), Gaps = 45/207 (21%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C +C+ + G C KC YY +C AC C + CN G C C V
Sbjct: 481 GGQC-NCRQNIVGRRCNKCAVGYYDFP---YCRACTCE-----SGVCNEVSGECICPENV 531
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G CD C Y + GC CEC+ G N NCD G+C + +
Sbjct: 532 AGTNCDTCAPQTYGYHPIVGCVDCECDIRGVDNNDLNCDFFTGEC-----------NCKP 580
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGH--------GGSLNLQCN-SEGRCQCKPGVT 191
+ R+ RC+R Y + G+ C+ + +C CK V
Sbjct: 581 NIGGRQ-----------CERCERGNYGYPYCEPCNCDVNGTTEEICDQTTAQCLCKDNVY 629
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCEC 215
GD+C++C+ + ++ GC SC C
Sbjct: 630 GDQCNQCEPGTFYLADSNPEGCISCFC 656
>gi|432916842|ref|XP_004079406.1| PREDICTED: laminin subunit alpha-3-like [Oryzias latipes]
Length = 3369
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 76/272 (27%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ---- 47
C C ++ C++D E+ + R GG C+DCQ + G NCE+C + +++
Sbjct: 349 CQCFSHASDCYYDPEVERRGASLDTFGRYSGGGVCVDCQHNTAGVNCERCAEGFFRPYDV 408
Query: 48 -KSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C +C+C+ + + S GRC C+P G+ CDRC +Y +
Sbjct: 409 PPESHTGCISCSCDDRTASGCEMGS-GRCVCRPQFAGENCDRCADGYYLY---------- 457
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P C S + + + PAG I + C
Sbjct: 458 ---------PQCISYPVRLTTTEF-------------------PAGP-IVEPTAC----- 483
Query: 167 PLGHG-------------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PLG+ G+++ C++ GRC C+ GV G++CDRC +Y F C++C
Sbjct: 484 PLGYFDSPNCQPCSCDYRGTVSRVCDASGRCLCREGVDGERCDRCRRGYYSF--PNCQAC 541
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+ GS C+ GQC C V G QC
Sbjct: 542 QCSQKGSYDTI--CNPTSGQCLCLPGVVGQQC 571
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 43/208 (20%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C C+C+ G+++ C++ GRC C+ GV G++CDRC +Y F C++C+C+ GS
Sbjct: 493 CQPCSCDYRGTVSRVCDASGRCLCREGVDGERCDRCRRGYYSF--PNCQACQCSQKGSYD 550
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTE-------LRV----QSRKNFDPAGNRIWDLRRCK 162
C+ GQC L G V + L ++ + + AG I D +
Sbjct: 551 TI--CNPTSGQC----LCLPGVVGQQCDQCASGLSFPQCSEAIRGCNIAGTEISDPQM-- 602
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAG 219
G C+C P V G CDRC +++ GC C C+ G
Sbjct: 603 -------------------GSCRCLPNVEGPLCDRCKQLYWNLATDNPHGCTECHCDLKG 643
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQCRS 247
++ C+ GQC CK +V G C S
Sbjct: 644 TLSGVGECEQKSGQCHCKPHVCGHACDS 671
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 80/199 (40%), Gaps = 39/199 (19%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C+CN GS C+ G +C C+P + G +C +C +Y F C+ CEC
Sbjct: 1303 CDCNKSGSTGSDCSPVGGQCPCRPHIIGRQCTKCATGYYGF--PYCRPCECG-------R 1353
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--------P 167
CD V G+C + R PA + +L P
Sbjct: 1354 RLCDEVTGRCICPPQTVR----------------PACDVCQNLTFSYHPLLGCENCACSP 1397
Query: 168 LGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G + C+ G+C CKP V G +CDRC +Y F C C+C+ G N
Sbjct: 1398 TGISTNAGPHCDRVSGQCSCKPYVGGRQCDRCAAGYYRF--PNCLPCDCHKDGVTSNV-- 1453
Query: 227 CDSVKGQCECKDNVEGAQC 245
C G+C CK NV G +C
Sbjct: 1454 CHPDTGECLCKRNVAGVRC 1472
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL--QCNSE-GRCQCKPGVTG 83
C + +GP C++C+ Y+ + DN CT C+C+ G+L+ +C + G+C CKP V G
Sbjct: 607 CLPNVEGPLCDRCKQLYWNLATDNPHGCTECHCDLKGTLSGVGECEQKSGQCHCKPHVCG 666
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
CD C ++ + GC++C+C+ G++ CD + GQC+
Sbjct: 667 HACDSCKEGYFLMQKKDYFGCETCQCDVGGAIGM--GCDQISGQCQ 710
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 17/132 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG ++ C G CL+C+ + G CE C++ YY + C AC C
Sbjct: 1725 CQCNGLASEC---------EDKTGRCLNCRYNTAGDRCEHCKEGYYGNAALRTCRACPCP 1775
Query: 61 PIGSLN------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
S N + N C CKPG TG++C+RC + FG+ C P N
Sbjct: 1776 FSESGNNFAVGCREVNGNINCVCKPGYTGERCERCSSGY--FGDPMSPGGRCQPCNCNGN 1833
Query: 115 TPNCDSVKGQCE 126
NCD G C+
Sbjct: 1834 GNNCDPRTGVCK 1845
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 88/274 (32%), Gaps = 117/274 (42%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE----------- 72
G CL C+ DG C++CR YY C AC C+ GS + CN
Sbjct: 512 GRCL-CREGVDGERCDRCRRGYYSFPN---CQACQCSQKGSYDTICNPTSGQCLCLPGVV 567
Query: 73 -----------------------------------GRCQCKPGVTGDKCDRCDVNHYDFG 97
G C+C P V G CDRC +++
Sbjct: 568 GQQCDQCASGLSFPQCSEAIRGCNIAGTEISDPQMGSCRCLPNVEGPLCDRCKQLYWNLA 627
Query: 98 E---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
GC C C+ G++ G+CE
Sbjct: 628 TDNPHGCTECHCDLKGTLSGV-------GECE---------------------------- 652
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCK 211
G+C CKP V G CD C ++ + GC+
Sbjct: 653 ------------------------QKSGQCHCKPHVCGHACDSCKEGYFLMQKKDYFGCE 688
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+C+ G++ CD + GQC+C+ N+ G C
Sbjct: 689 TCQCDVGGAIGM--GCDQISGQCQCRANIIGRTC 720
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 77/207 (37%), Gaps = 44/207 (21%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ G C KC YY G +C C C L GRC C P
Sbjct: 1319 GGQC-PCRPHIIGRQCTKCATGYY---GFPYCRPCECG----RRLCDEVTGRCICPPQTV 1370
Query: 83 GDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTEL 140
CD C + + GC++C C+P G N P+CD V GQC
Sbjct: 1371 RPACDVCQNLTFSYHPLLGCENCACSPTGISTNAGPHCDRVSGQC--------------- 1415
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGH---------GGSLNLQCNSEGRCQCKPGVT 191
S K + G R D RC Y + G + N+ G C CK V
Sbjct: 1416 ---SCKPY--VGGRQCD--RCAAGYYRFPNCLPCDCHKDGVTSNVCHPDTGECLCKRNVA 1468
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCEC 215
G +CD C + F + GC SC C
Sbjct: 1469 GVRCDVCREGSFYFDPSNPQGCTSCFC 1495
>gi|157800|gb|AAA28662.1| laminin A chain [Drosophila melanogaster]
Length = 3712
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ GS + CNS+G+C C+P G +CD
Sbjct: 606 NCLNNFAGKQCTLCTAGYYSYPD---CLPCHCDSHGSQGVSCNSDGQCLCQPNFDGRQCD 662
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 663 SCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECK----- 715
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G +L+ + G+C CKP G +C C
Sbjct: 716 ------PLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 769
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D A GCK C C+ GS ++ CD + GQC+C + G C
Sbjct: 770 GTFDLDSASLFGCKDCSCDVGGSWQSV--CDKISGQCKCHPRITGLAC 815
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 104/260 (40%), Gaps = 74/260 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCN-PIGSLNL-------QCNSE 72
G C CQ +G +CE+C YY + + C C C P S N + +
Sbjct: 1823 GICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQ 1882
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+CKPG TG +C+ C Y E+ CK CEC+ + ++ +CD+ G+C
Sbjct: 1883 IHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGSCDTRTGEC---- 1938
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--------PLGHGGSLNLQ-CNS 180
RC +T+ P +G ++ L+ C S
Sbjct: 1939 -----------------------------LRCLNNTFGAACNLCAPGFYGDAIKLKNCQS 1969
Query: 181 --------------EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
G C C V GD+CDRC +HY F GC++C+C G+ N+
Sbjct: 1970 CDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNST 2026
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD G C CK V G QC
Sbjct: 2027 QCDPHTGHCACKSGVTGRQC 2046
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 113/270 (41%), Gaps = 56/270 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G SN C +D+E+ NR G GG C +CQ + G NC KC+ YY+ G
Sbjct: 333 CNCHGHSNECKYDEEV-NRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKG 391
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
++ C+ C C+ S C E G C+C+ CD C +Y G C+ C
Sbjct: 392 KHWNETDVCSPCQCDYFFSTG-HCEEETGNCECRAAFQPPSCDSCAYGYY--GYPNCREC 448
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN G+ N +C++ GQ +++ G ++C
Sbjct: 449 ECNLNGT--NGYHCEAESGQQCPCKINFAGAY---------------------CKQCAEG 485
Query: 165 TYPLGH--------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
Y GS+ CN + G C+C GD C+RC H F C C+C
Sbjct: 486 YYGFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERC--KHGYFNYPTCSYCDC 543
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G+ C+ GQC C++ G +C
Sbjct: 544 DNQGTESEI--CNKQSGQCICREGFGGPRC 571
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C P V GD C++C N Y F + GC+ C CNP G CD G CEC+
Sbjct: 1432 TTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ 1491
Query: 239 NVEGAQC 245
N+EG C
Sbjct: 1492 NIEGRAC 1498
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+ C+ G C C
Sbjct: 1936 GECLRCLNNTFGAACNLCAPGFY---GDAIKLKNCQSCDCDDLGTQT--CDPFVGVCTCH 1990
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V GD+CDRC +HY F GC++C+C G+ N+ CD G C + + GR
Sbjct: 1991 ENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNSTQCDPHTGHC-ACKSGVTGR-- 2044
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCN-SEGRCQC 186
RC D + G S CN + G+CQC
Sbjct: 2045 -------------------QCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQC 2085
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PGV GD+CD C + GC+ C
Sbjct: 2086 LPGVIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C++C + YY G C AC CN IGS+ CN + G C+C GD C+
Sbjct: 470 CKINFAGAYCKQCAEGYY---GFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCE 526
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC H F C C+C+ G+ C+ GQC + R L
Sbjct: 527 RC--KHGYFNYPTCSYCDCDNQGTESEI--CNKQSGQCICREGFGGPRCDQCL------- 575
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P D + C GS + C++ G+C C G +C C +Y + +
Sbjct: 576 --PGFYNYPDCKPCN-----CSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPD 628
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C C+ GS + N D GQC C+ N +G QC S
Sbjct: 629 --CLPCHCDSHGSQGVSCNSD---GQCLCQPNFDGRQCDS 663
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 85/206 (41%), Gaps = 53/206 (25%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+ GS + +C+ G +CQCKP V C RC +Y F + CK C+C N+
Sbjct: 1375 CNCDYAGSTSFECHPFGGQCQCKPNVIERTCGRCRSRYYGFPD--CKPCKC------PNS 1426
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY-------- 166
C+ G+C N I DL +C +TY
Sbjct: 1427 AMCEPTTGECMCPP-----------------------NVIGDLCEKCAPNTYGFHQVIGC 1463
Query: 167 ------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
P+G N QC+ G C+C+ + G CD C +++F C+ C C+ G
Sbjct: 1464 EECACNPMGIANG-NSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPH--CEQCSCHKPG 1520
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD + G C CK NV G C
Sbjct: 1521 TELEV--CDKIDGACFCKKNVVGRDC 1544
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 85/200 (42%), Gaps = 30/200 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + C +CR YY G C C C P ++ C + G C C P V
Sbjct: 1391 GGQC-QCKPNVIERTCGRCRSRYY---GFPDCKPCKC-PNSAM---CEPTTGECMCPPNV 1442
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
GD C++C N Y F + GC+ C CNP G CD G CE Q + GR
Sbjct: 1443 IGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ-NIEGRA---- 1497
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDT--YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
D N ++ C++ + P G L + +G C CK V G CD+C
Sbjct: 1498 -------CDVCSNGYFNFPHCEQCSCHKP---GTELEVCDKIDGACFCKKNVVGRDCDQC 1547
Query: 199 DVNHYDFGEA---GCKSCEC 215
Y+ E+ GC +C C
Sbjct: 1548 VDGTYNLQESNPDGCTTCFC 1567
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL CQ + DG C+ C++ +Y NF C CNC+P G ++ C S C+
Sbjct: 648 GQCL-CQPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 701
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK VTG C+ C +++ + GC+ C+C G++ C S GQC + ++
Sbjct: 702 CKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQC-PCKPHTQ 760
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R FD ++ + C D GGS C+ G+C+C P +TG
Sbjct: 761 GRRCQECR---DGTFDLDSASLFGCKDCSCDV-----GGSWQSVCDKISGQCKCHPRITG 812
Query: 193 DKCDRCDVNHY 203
C + H+
Sbjct: 813 LACTQPLTTHF 823
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H GHC C+ G C++C ++++ D CT CNCN S CN + G+CQC PG
Sbjct: 2031 HTGHCA-CKSGVTGRQCDRCAVDHWKYEKDG-CTPCNCNQGYSRGFGCNPNTGKCQCLPG 2088
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSC 104
V GD+CD C + GC+ C
Sbjct: 2089 VIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 41 CRDNYYQKS-----GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY- 94
R NY++++ D + T + + G+ Q + RC C PG +G C+ C +Y
Sbjct: 1737 IRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYR 1796
Query: 95 -DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G G C CECN ++ CD G C Q + G H E R S +
Sbjct: 1797 DPSGPYGGYCIPCECN-----GHSETCDCATGICSKCQHGTEGD-HCE-RCVSGYYGNAT 1849
Query: 152 GNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
D C D+ ++ + + C+CKPG TG +C+ C Y E
Sbjct: 1850 NGTPGDCMICACPLPFDSNNFATSCEIS-ESGDQIHCECKPGYTGPRCESCANGFYGEPE 1908
Query: 208 A---GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+ CK CEC+ + ++ +CD+ G+C C +N GA C
Sbjct: 1909 SIGQVCKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAAC 1950
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNV 240
G C+C+ CD C +Y G C+ CECN G+ N +C++ GQ C CK N
Sbjct: 419 GNCECRAAFQPPSCDSCAYGYY--GYPNCRECECNLNGT--NGYHCEAESGQQCPCKINF 474
Query: 241 EGAQCR 246
GA C+
Sbjct: 475 AGAYCK 480
>gi|345495089|ref|XP_001603629.2| PREDICTED: laminin subunit alpha-like [Nasonia vitripennis]
Length = 3648
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 24/225 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C +C Y++ C +C+C+ GS+ + C+ +G+CQC+ GD+CD+
Sbjct: 615 CLSNFVGKTCNQCAPGYHKYPE---CISCDCDSHGSIGVSCDLDGKCQCRENFDGDRCDK 671
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQS 144
C N Y+F C+ C C+PAG C S+ QC + RV + Q
Sbjct: 672 CKENFYNF--PSCEGCNCDPAGIAGTFQGCGSLPAGELCQC-------KERVEGRICNQC 722
Query: 145 RKNF-DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
+K F + N I CK + G GS+ G+C CKP VT C C +
Sbjct: 723 KKLFWNLQANNILGCDNCKCNI--PGVIGSIGECDGKTGQCICKPSVTSRDCSSCVDGTF 780
Query: 204 DFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
E+ GC C C+ G++ +T C+ + GQC C+ V+G C
Sbjct: 781 GLQESNLYGCSQCSCDIGGALSST--CNKIDGQCRCRSRVDGKTC 823
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 108/240 (45%), Gaps = 47/240 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
GHCL C+ GP C++C Y+ G C CNC+ GS ++ C++ G+C C G
Sbjct: 566 GHCL-CKEGYGGPRCDQCVSGYF---GFPNCQPCNCSKNGSTSIGCDASGKCSCLSNFVG 621
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C++C ++ + E C SC+C+ GS+ + CD + G+C Q
Sbjct: 622 KTCNQCAPGYHKYPE--CISCDCDSHGSIGVS--CD-LDGKC-----------------Q 659
Query: 144 SRKNFDPAGNRIWDLRRCKRDTY-----------PLGHGGSLN--LQCNSEGRCQCKPGV 190
R+NFD G+R +CK + Y P G G+ + CQCK V
Sbjct: 660 CRENFD--GDR---CDKCKENFYNFPSCEGCNCDPAGIAGTFQGCGSLPAGELCQCKERV 714
Query: 191 TGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
G C++C ++ GC +C+CN G + + CD GQC CK +V C S
Sbjct: 715 EGRICNQCKKLFWNLQANNILGCDNCKCNIPGVIGSIGECDGKTGQCICKPSVTSRDCSS 774
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ + G +C C D Y+ C C C+ G+ + C+ + G C CK G G +CD
Sbjct: 524 CKNNYGGRSCNTCEDGYFDYPD---CKFCECDTRGTESGVCDKQDGHCLCKEGYGGPRCD 580
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C V+ Y FG C+ C C+ GS + CD+ G+C S + G+ +
Sbjct: 581 QC-VSGY-FGFPNCQPCNCSKNGS--TSIGCDA-SGKC-SCLSNFVGKTCNQCA------ 628
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P ++ + C D++ GS+ + C+ +G+CQC+ GD+CD+C N Y+F
Sbjct: 629 --PGYHKYPECISCDCDSH-----GSIGVSCDLDGKCQCRENFDGDRCDKCKENFYNF-- 679
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQC 245
C+ C C+PAG C S+ C+CK+ VEG C
Sbjct: 680 PSCEGCNCDPAGIAGTFQGCGSLPAGELCQCKERVEGRIC 719
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCTACNCNPIGSLNLQCNSEGRCQC 77
GG C +C+ + +G NC C+ +Y+ + + C C C+ I S + G+C+C
Sbjct: 373 GGVCQNCKHNTEGINCNHCKPKFYRPQNKPLNATDVCQPCQCDYIYSTGNCYDLTGQCEC 432
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
K T CD C +Y G C+ C+CN G+ + +C++ +GQC + + +
Sbjct: 433 KKEYTAPNCDSCSYGYY--GYPHCRPCDCNLNGT--DGYHCEAYEGQCPCKE--NFAGHY 486
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCD 196
++ + NF D C+ D GSLN C+ G C CK G C+
Sbjct: 487 CDICAEEYYNFP-------DCLPCECDAI-----GSLNNVCDVVSGNCTCKNNYGGRSCN 534
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ ++D+ + CK CEC+ G+ CD G C CK+ G +C
Sbjct: 535 TCEDGYFDYPD--CKFCECDTRGTESGV--CDKQDGHCLCKEGYGGPRC 579
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C + G C++C D+++ S C C+C + S + QC + G C+CKPGV G CD
Sbjct: 1981 CHENVVGEKCDRCADDHWGFSKCQGCRPCDC-ALASDSTQCEDDTGNCKCKPGVEGRTCD 2039
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
RC ++++G GC SCEC S +C+ GQCE
Sbjct: 2040 RCMAGYWNYGPEGCISCECTTGYS--RGASCNPETGQCE 2076
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 110/271 (40%), Gaps = 59/271 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG ++ C + G C +C+ G +CE C YY + + C C
Sbjct: 1801 CQCNGHADTCDVNT---------GICHNCKNGTTGDHCELCEVGYYGNATIGTPSDCLIC 1851
Query: 58 NCN-PIGSLNL-------QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
C PI S N + S+ C C G G +C+ C ++ E CK C+C
Sbjct: 1852 ACPLPIPSNNFAQGCEVSEDGSKISCDCNEGYYGARCESCAAGYFGRPEVIGDHCKPCDC 1911
Query: 107 NPAGSVKNTPNCDSVKGQC---------ESAQLSSRGRVHTELRVQSRKN-F-DPAGNRI 155
+ +CDSV G+C E+ L + G + + K+ F D G +
Sbjct: 1912 SGNIDTNEIDSCDSVTGECLKCLNNTYGEACNLCAPGFFGDAVEKKDCKSCFCDKCGMKY 1971
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCE 214
D N +G CQC V G+KCDRC +H+ F + GC+ C+
Sbjct: 1972 CD---------------------NRDGLCQCHENVVGEKCDRCADDHWGFSKCQGCRPCD 2010
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C A ++ C+ G C+CK VEG C
Sbjct: 2011 CALAS---DSTQCEDDTGNCKCKPGVEGRTC 2038
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C+CKPGV G CDRC ++++G GC SCEC S +C+ GQCEC V
Sbjct: 2025 GNCKCKPGVEGRTCDRCMAGYWNYGPEGCISCECTTGYS--RGASCNPETGQCECLPGVL 2082
Query: 242 GAQC 245
G +C
Sbjct: 2083 GEKC 2086
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C C V G +CD+C+ Y + + GC+ C+C+P G + CD + G C+CK NV
Sbjct: 1435 GACICPSHVVGPRCDQCEPGTYGYDQIIGCEECQCHPYGVLDGDLQCDLLTGHCKCKKNV 1494
Query: 241 EGAQCRS 247
EG +C +
Sbjct: 1495 EGRECNT 1501
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 89/194 (45%), Gaps = 19/194 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL C + G C C ++ + + C +C C+ G + N +G CQC V
Sbjct: 1928 GECLKCLNNTYGEACNLCAPGFFGDAVEKKDCKSCFCDKCG-MKYCDNRDGLCQCHENVV 1986
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G+KCDRC +H+ F + GC+ C+C A ++ C+ G C+ + GR +
Sbjct: 1987 GEKCDRCADDHWGFSKCQGCRPCDCALAS---DSTQCEDDTGNCK-CKPGVEGRT-CDRC 2041
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 200
+ N+ P G C+ T G S CN E G+C+C PGV G+KCD C
Sbjct: 2042 MAGYWNYGPEG-----CISCECTT-----GYSRGASCNPETGQCECLPGVLGEKCDHCPH 2091
Query: 201 NHYDFGEAGCKSCE 214
GC++C+
Sbjct: 2092 RTVLDERRGCQTCD 2105
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
EG+C CK G CD C +Y+F + C CEC+ GS+ N CD V G C CK+N
Sbjct: 473 EGQCPCKENFAGHYCDICAEEYYNFPD--CLPCECDAIGSLNNV--CDVVSGNCTCKNNY 528
Query: 241 EGAQCRS 247
G C +
Sbjct: 529 GGRSCNT 535
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 27/187 (14%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL-----QCNSEGRCQCKPGV 81
C+ + DG C+KC++N+Y NF C CNC+P G + CQCK V
Sbjct: 660 CRENFDGDRCDKCKENFY-----NFPSCEGCNCDPAGIAGTFQGCGSLPAGELCQCKERV 714
Query: 82 TGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVH 137
G C++C ++ GC +C+CN G + + CD GQC ++SR
Sbjct: 715 EGRICNQCKKLFWNLQANNILGCDNCKCNIPGVIGSIGECDGKTGQCICKPSVTSR---- 770
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCD 196
+ F + ++ +C D GG+L+ CN +G+C+C+ V G C+
Sbjct: 771 -DCSSCVDGTFGLQESNLYGCSQCSCDI-----GGALSSTCNKIDGQCRCRSRVDGKTCN 824
Query: 197 RCDVNHY 203
+ HY
Sbjct: 825 KPMRAHY 831
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 37/215 (17%)
Query: 41 CRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
CRD+ + + + + C+C+ G+ + +C G +C CK + G +C+ C + FG
Sbjct: 1358 CRDSVFSLTTNYNSGALPCSCDIDGTRSFECEKFGGQCPCKDNIIGRRCNICKTGY--FG 1415
Query: 98 EAGCKSCECNPAGSV--KNTPNC----DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C+ C C P+ ++ T C V +C+ + + G
Sbjct: 1416 FPNCRPCNC-PSAAICEPETGACICPSHVVGPRCDQCEPGTYGY---------------- 1458
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
++I C+ Y + G +LQC+ G C+CK V G +C+ C HY F C
Sbjct: 1459 -DQIIGCEECQCHPYGVLDG---DLQCDLLTGHCKCKKNVEGRECNTCRAGHYQF--PYC 1512
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+C+ G+ + C+ C CK+NV G C
Sbjct: 1513 DKCDCDVRGTTEEI--CNQETADCHCKENVHGPAC 1545
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN--LQCNS-EGRCQCKPG 80
G C+ C GP C++C Y C C C+P G L+ LQC+ G C+CK
Sbjct: 1435 GACI-CPSHVVGPRCDQCEPGTYGYDQIIGCEECQCHPYGVLDGDLQCDLLTGHCKCKKN 1493
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
V G +C+ C HY F C C+C+ G+ +
Sbjct: 1494 VEGRECNTCRAGHYQF--PYCDKCDCDVRGTTEEI 1526
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 86/201 (42%), Gaps = 32/201 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
GG C C+ + G C C+ Y+ G C CNC P ++ C E G C C V
Sbjct: 1392 GGQC-PCKDNIIGRRCNICKTGYF---GFPNCRPCNC-PSAAI---CEPETGACICPSHV 1443
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CD+C+ Y + + GC+ C+C+P G + CD + G C+ +
Sbjct: 1444 VGPRCDQCEPGTYGYDQIIGCEECQCHPYGVLDGDLQCDLLTGHCKCKK----------- 1492
Query: 141 RVQSRK-NFDPAGNRIWDL-RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
V+ R+ N AG+ + +C D G+ CN E C CK V G CD
Sbjct: 1493 NVEGRECNTCRAGHYQFPYCDKCDCDV-----RGTTEEICNQETADCHCKENVHGPACDL 1547
Query: 198 CDVNHYDFGEA---GCKSCEC 215
C ++ + GC +C C
Sbjct: 1548 CKDGMFNLQPSNPKGCSACFC 1568
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDK 85
C + G +CE+C YY+ +G N +C C CN G + + G C CK G TGD
Sbjct: 1771 CPPNYKGLSCEECAKGYYRVAGPNGGYCVKCQCN--GHADTCDVNTGICHNCKNGTTGDH 1828
Query: 86 CDRCDVNHYDFGEAGCKS 103
C+ C+V +Y G S
Sbjct: 1829 CELCEVGYYGNATIGTPS 1846
>gi|426241863|ref|XP_004014800.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Ovis
aries]
Length = 3434
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 26/225 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ + +G +C++CR Y+ G C AC C+P GS++ C + G C+C+PG G
Sbjct: 553 GRCL-CRPEFNGAHCDRCRLGYH---GYPECHACACDPRGSMDQLCGAGGLCRCRPGYAG 608
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C C + F + C C C+P GS+ CD GQC S R RV T LR
Sbjct: 609 ATCQECSPGFHGFPD--CAPCHCSPEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC- 657
Query: 144 SRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
D +D C+ + +P G + + ++ C C+ V G CDRC
Sbjct: 658 -----DMCVPGAYDFPYCEAGSCHPAGLAPADRVPPEAQAPCTCRAHVEGPSCDRCKPGF 712
Query: 203 YDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQ--CECKDNVEG 242
+ + GC C C+P G++ C + Q CKD G
Sbjct: 713 WGLSPSNPEGCTRCNCDPRGTLGGAAQCQPCRDQTCAACKDGFFG 757
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 98/259 (37%), Gaps = 59/259 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC G ++ C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 308 CNCYGHAHDCYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSPDH 367
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNC + + GRC C+P TG +CD C DF C
Sbjct: 368 PLDSPHACRRCNCESDFTDGTCEDLTGRCYCRPNFTGARCDACAEGFTDF-----PHCYP 422
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P+ S +T G + S+ G GN C++D
Sbjct: 423 VPSSSHNDTGEQVLPAGHIVNCDCSAAGT---------------QGN------ACRKDP- 460
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G C CKP G C+ C Y GC+ C+C+ G V T
Sbjct: 461 -------------QVGHCVCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVVDGT-- 502
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC C+ EGA C
Sbjct: 503 CDRDSGQCMCRTGFEGAAC 521
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 114/266 (42%), Gaps = 48/266 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN---FCTAC 57
C C+G S+RC G C+ CQ + +G +CE+C+ + + ++ C +C
Sbjct: 1786 CQCHGHSDRCLPGS---------GVCVGCQHNTEGDHCERCQAGFVRTGSEDPAAPCISC 1836
Query: 58 NCN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNP 108
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1837 PCPLAVPSNNFATGCILRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSG 1896
Query: 109 AGSVKNT-PNCDSVKGQCESAQLSSRG--RVHTELRVQS-RKNFDPAGNRIWDLRRCKR- 163
G +CD + G C RG R T R +S F GN + C R
Sbjct: 1897 NGDPNMLFSDCDPLTGAC-------RGCLRHTTGPRCESCAPGF--YGNALLP-GNCTRC 1946
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGS 220
D P G C+ GRC CK GVTG +CDRC H+ F EA GC C C PA
Sbjct: 1947 DCSPCGTEA-----CDPHSGRCLCKAGVTGLRCDRCQEGHFGF-EACEGCHPCACGPAA- 1999
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQCR 246
+ C GQC C+ G QCR
Sbjct: 2000 --ESSECHPQSGQCHCRPGTGGPQCR 2023
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+++ C G +C C+ V G C RC ++ F C+ C+C+ G +
Sbjct: 1370 CGCHEVGAMSPTCEPFGGQCPCRAHVIGRDCSRCATGYWGF--PNCRPCDCS--GRL--- 1422
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1423 --CDELTGQC----------------ICPPRTIPP------DCLVCQPQTFGCHPLVGCE 1458
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G ++ C+ + G+C+C+P V G +CD C + F C+ C+C+ AGS
Sbjct: 1459 ECNCSGPGVQELMDPTCDVDSGQCKCRPNVAGRRCDTCAPGFHGF--PSCRPCDCHEAGS 1516
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1517 APGM--CDPLTGQCYCKENVQGPRC 1539
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 83/211 (39%), Gaps = 41/211 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1894 CSGNGDPNMLFSDCDPLT-----GACRGCLRHTTGPRCESCAPGFYGNALLPGNCTRCDC 1948
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPN 117
+P G+ +S GRC CK GVTG +CDRC H+ F EA GC C C PA +
Sbjct: 1949 SPCGTEACDPHS-GRCLCKAGVTGLRCDRCQEGHFGF-EACEGCHPCACGPAA---ESSE 2003
Query: 118 CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ 177
C GQC G R C + L G Q
Sbjct: 2004 CHPQSGQCHCR----------------------PGTGGPQCRECAPGHWGLPEQGCRRCQ 2041
Query: 178 CNS------EGRCQCKPGVTGDKCDRCDVNH 202
C GRC C PG++G++C+ C H
Sbjct: 2042 CQGGHCDLHTGRCTCPPGLSGERCETCSHQH 2072
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 95/236 (40%), Gaps = 54/236 (22%)
Query: 30 QGDRDGPNCEKCRDNYYQKSGDNFCTA-----CNCNPIGSLNLQCNSE---GRCQCKPGV 81
+G D P+C + + +G+ A C+C+ G+ C + G C CKP
Sbjct: 412 EGFTDFPHCYPVPSSSHNDTGEQVLPAGHIVNCDCSAAGTQGNACRKDPQVGHCVCKPNF 471
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G C+ C Y GC+ C+C+ G V T CD GQC
Sbjct: 472 QGTHCELCAPGFYG---PGCQPCQCSSPGVVDGT--CDRDSGQC---------------- 510
Query: 142 VQSRKNFDPAGNRIWDLRRCKR-----DTYPL------GHGGSLNLQCNSEGRCQCKPGV 190
R F+ A C R +PL G+L C++ GRC C+P
Sbjct: 511 -MCRTGFEGAA--------CDRCAPGYFHFPLCQLCGCSPVGTLPEGCDATGRCLCRPEF 561
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G CDRC + ++ + E C +C C+P GS+ C + G C C+ GA C+
Sbjct: 562 NGAHCDRCRLGYHGYPE--CHACACDPRGSMDQL--CGA-GGLCRCRPGYAGATCQ 612
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G+C C+P VTG +CD C YDF C++ C+PAG
Sbjct: 633 GSLHAACDPRSGQCSCRPRVTGLRCDMCVPGAYDFPY--CEAGSCHPAGLAPADRVPPEA 690
Query: 231 KGQCECKDNVEGAQC 245
+ C C+ +VEG C
Sbjct: 691 QAPCTCRAHVEGPSC 705
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C H+ E GC+ C+C +CD G+C C +
Sbjct: 2009 GQCHCRPGTGGPQCRECAPGHWGLPEQGCRRCQCQGG-------HCDLHTGRCTCPPGLS 2061
Query: 242 GAQCRS 247
G +C +
Sbjct: 2062 GERCET 2067
>gi|313229713|emb|CBY18528.1| unnamed protein product [Oikopleura dioica]
Length = 3726
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C D G +CEKC ++ + + C +C CN GS N G CQCKP V G
Sbjct: 2008 GTCLACVNDTAGKHCEKCAPFFFGNAIEKTCESCVCNICGSQGCD-NIFGDCQCKPNVIG 2066
Query: 84 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+ CD+C +DF GCK+C C+P GS+ + CD + GQC
Sbjct: 2067 ETCDKCADGFWDFDSCHITGCKTCACHPEGSLSDV--CDKLTGQCTCK------------ 2112
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG------SLNLQCNSE-GRCQCKPGVTGD 193
G +C+ Y L G + L C+S+ GRC+C PGV G
Sbjct: 2113 ----------PGVEGLSCDKCQEGHYDLTSTGCKSCNCPVGLPCDSQTGRCECPPGVIGA 2162
Query: 194 KCDRCD 199
+CD+C+
Sbjct: 2163 QCDQCE 2168
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 82/187 (43%), Gaps = 47/187 (25%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C+CKP V G C RC+V +Y++ C+ C C V NT CD G+C
Sbjct: 1441 GQCECKPNVIGRDCSRCEVGYYNW--PNCRKCNC-----VGNTV-CDENTGEC------- 1485
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL-QCNSEG--------- 182
PA N D C+ D Y H L CN+EG
Sbjct: 1486 ---------------LCPA-NTSEDCLSCQNDAYGYHHITGCKLCNCNAEGTIGASESCD 1529
Query: 183 ----RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+C C P +TG CDRC +Y F CK CEC+ G++ + CD G C+CKD
Sbjct: 1530 DHNGQCACLPSITGKSCDRCLPGYYGF--PNCKKCECDERGTIGDNNQCDVKTGACQCKD 1587
Query: 239 NVEGAQC 245
NVEG C
Sbjct: 1588 NVEGTSC 1594
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 104/237 (43%), Gaps = 48/237 (20%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCN---PIGSLNLQCNSE-GRC-QCKPG 80
+CQ GP CEKC ++ + + C C+CN + + N+QC+ + G C C
Sbjct: 1957 NCQYGYTGPACEKCDAGFFGRPNMINQECKKCDCNGNSDMSTGNVQCDDQDGTCLACVND 2016
Query: 81 VTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
G C++C + FG E C+SC CN GS CD++ G C
Sbjct: 2017 TAGKHCEKC--APFFFGNAIEKTCESCVCNICGS----QGCDNIFGDC------------ 2058
Query: 138 TELRVQSRKNF-----DPAGNRIWDLRRCKRD---TYPLGHGGSLNLQCNS-EGRCQCKP 188
Q + N D + WD C T GSL+ C+ G+C CKP
Sbjct: 2059 -----QCKPNVIGETCDKCADGFWDFDSCHITGCKTCACHPEGSLSDVCDKLTGQCTCKP 2113
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GV G CD+C HYD GCKSC C P G CDS G+CEC V GAQC
Sbjct: 2114 GVEGLSCDKCQEGHYDLTSTGCKSCNC-PVGL-----PCDSQTGRCECPPGVIGAQC 2164
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 34 DGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDV 91
DG CEKCR Y+ C C C+ IG+L N C+ G+C CK +G +CD+C
Sbjct: 589 DGAKCEKCRAGYHTFPD---CVDCTCSEIGTLKNEPCDIYTGQCACKEEYSGVRCDQCAD 645
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
N Y CK+CEC+ G+ + CD V GQC+ Q + G T + + D
Sbjct: 646 NFYMDESGFCKACECDLNGA--ESGYCDKVTGQCQCRQ--TDGLAQT-----TGRRCDSC 696
Query: 152 GNRIWDLRRCKR-DTYPLGHGGSLNLQCN--SEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
++ +C+ +P G C+ G C CK G C++C H++ A
Sbjct: 697 ALGFFNFPKCESCPCHPDGIANPDKAYCSFFETGTCTCKRATGGMYCEQCLNKHWNLQGA 756
Query: 209 ---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
GC+ C C AG + +C S GQC CK++V
Sbjct: 757 NPDGCEECGCFRAGLLNEIKDCASSDGQCSCKNHV 791
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 98/236 (41%), Gaps = 52/236 (22%)
Query: 35 GPNCEKCRDNY--YQKSGDNF-CTACNC-NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCD 90
G NCE C + Y Y K G + C C C + S ++ + + C C+ G TG C++CD
Sbjct: 1912 GQNCEYCAEGYIGYAKGGTSSDCKRCPCPSEQNSHSVSYDFKIVCNCQYGYTGPACEKCD 1971
Query: 91 VNHY---DFGEAGCKSCECNPAGSVKN-TPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
+ + CK C+CN + CD G C + + G+ H E
Sbjct: 1972 AGFFGRPNMINQECKKCDCNGNSDMSTGNVQCDDQDGTCLACVNDTAGK-HCE------- 2023
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC--------------NSEGRCQCKPGVTG 192
+C P G ++ C N G CQCKP V G
Sbjct: 2024 -------------KCA----PFFFGNAIEKTCESCVCNICGSQGCDNIFGDCQCKPNVIG 2066
Query: 193 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD+C +DF GCK+C C+P GS+ + CD + GQC CK VEG C
Sbjct: 2067 ETCDKCADGFWDFDSCHITGCKTCACHPEGSLSDV--CDKLTGQCTCKPGVEGLSC 2120
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 40/268 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+ + RC++D+ + R G GG C+DC+ G NCE+C + +Y+
Sbjct: 345 CNCHQHAERCYYDENV-ERNGLSVSAEGIYEGGGVCVDCKHHTTGINCERCENGFYRNPA 403
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
+ C C+C P + C+ + G C+CK G C+ C +F E C C
Sbjct: 404 ADIIDVEACLECDC-PSNYTDTTCDHDTGACKCKEKYAGHLCNSCAEGFMNFPE--CDPC 460
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF-----DPAGNRIWDLR 159
C AG T GQC +S ++N+ D + ++
Sbjct: 461 PCFYAG----TEATQDASGQCRPDDISG--------TCSCKENYTGPMCDQCADGFFNFP 508
Query: 160 RCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
C G N C+ E G C CKP GD C++C ++++ C C C+
Sbjct: 509 DCIPCECAQQPGAIKNAPCDKESGACVCKPAFDGDSCEQCATRYHNY--PACDRCLCSEY 566
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G+ + N C C D +GA+C
Sbjct: 567 GTTDDFCNATLSTLSCFCDDRFDGAKCE 594
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 108/246 (43%), Gaps = 42/246 (17%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCK-- 78
+ G C C+ + G C++C DN+Y FC AC C+ G+ + C+ G+CQC+
Sbjct: 625 YTGQCA-CKEEYSGVRCDQCADNFYMDES-GFCKACECDLNGAESGYCDKVTGQCQCRQT 682
Query: 79 ---PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS--- 132
TG +CD C + ++F + C+SC C+P G N D K C + +
Sbjct: 683 DGLAQTTGRRCDSCALGFFNFPK--CESCPCHPDG----IANPD--KAYCSFFETGTCTC 734
Query: 133 ---RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGR 183
G ++ E N+ W+L+ D + G + +S+G+
Sbjct: 735 KRATGGMYCE----------QCLNKHWNLQGANPDGCEECGCFRAGLLNEIKDCASSDGQ 784
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNT-PNCDSVKGQCECKDN 239
C CK V KC +C Y E GC C C+ G+ C++ GQC CKD+
Sbjct: 785 CSCKNHVCTRKCSKCLDGFYGLEEKDYFGCVPCSCDVGGTQGGALAQCEANNGQCTCKDH 844
Query: 240 VEGAQC 245
V+G +C
Sbjct: 845 VKGRRC 850
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCKPGVT 82
CL CQ D G Y+ +G C CNCN G++ + G+C C P +T
Sbjct: 1495 CLSCQNDAYG---------YHHITG---CKLCNCNAEGTIGASESCDDHNGQCACLPSIT 1542
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G CDRC +Y F CK CEC+ G++ + CD G C+
Sbjct: 1543 GKSCDRCLPGYYGF--PNCKKCECDERGTIGDNNQCDVKTGACQ 1584
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 35/231 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---SEGRCQCKPGVTGDK 85
C+ DG +CE+C Y+ C C C+ G+ + CN S C C G K
Sbjct: 536 CKPAFDGDSCEQCATRYHNYPA---CDRCLCSEYGTTDDFCNATLSTLSCFCDDRFDGAK 592
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
C++C ++ F + C C C+ G++KN P CD GQC + S R Q
Sbjct: 593 CEKCRAGYHTFPD--CVDCTCSEIGTLKNEP-CDIYTGQCACKEEYSGVRCD-----QCA 644
Query: 146 KNF--DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK-----PGVTGDKCDR 197
NF D +G + C+ D G+ + C+ G+CQC+ TG +CD
Sbjct: 645 DNFYMDESGF----CKACECDL-----NGAESGYCDKVTGQCQCRQTDGLAQTTGRRCDS 695
Query: 198 CDVNHYDFGEAGCKSCECNPAGSV-KNTPNCDSVK-GQCECKDNVEGAQCR 246
C + ++F + C+SC C+P G + C + G C CK G C
Sbjct: 696 CALGFFNFPK--CESCPCHPDGIANPDKAYCSFFETGTCTCKRATGGMYCE 744
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKP 79
+GG C +C+ + G +C +C YY C CNC +G N C+ G C C P
Sbjct: 1438 AYGGQC-ECKPNVIGRDCSRCEVGYYNWPN---CRKCNC--VG--NTVCDENTGECLC-P 1488
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
T + C C + Y + GCK C CN G++ + +CD GQC
Sbjct: 1489 ANTSEDCLSCQNDAYGYHHITGCKLCNCNAEGTIGASESCDDHNGQCAC----------- 1537
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
L + K+ D + CK+ + G G N QC+ + G CQCK V G C
Sbjct: 1538 -LPSITGKSCDRCLPGYYGFPNCKKCECDERGTIGDNN-QCDVKTGACQCKDNVEGTSCS 1595
Query: 197 RCDVNHYDFGE---AGCKSCECN 216
RC + AGC SC C+
Sbjct: 1596 RCKAGSFFLDSQNPAGCISCFCS 1618
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 110/285 (38%), Gaps = 63/285 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-------DNF 53
C+CNG ++ C DK N + C DC+ + G +C++C + Q+ +N
Sbjct: 286 CDCNGHADECSADK---NSGDYKLRC-DCKHNTAGISCQECMPLFNQRKWKHAERDHENE 341
Query: 54 CTACNCNP----------IGSLNLQCNSEGRCQ-------CKPGVTGDKCDRCDVNHYDF 96
C ACNC+ + L ++EG + CK TG C+RC+ Y
Sbjct: 342 CVACNCHQHAERCYYDENVERNGLSVSAEGIYEGGGVCVDCKHHTTGINCERCENGFYRN 401
Query: 97 GEA------GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
A C C+C P+ T CD G C+ + + ++
Sbjct: 402 PAADIIDVEACLECDC-PSNYTDTT--CDHDTGACKCKEKYAGHLCNS------------ 446
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNS--------EGRCQCKPGVTGDKCDRCDVNH 202
+ C D P + G+ Q S G C CK TG CD+C
Sbjct: 447 CAEGFMNFPEC--DPCPCFYAGTEATQDASGQCRPDDISGTCSCKENYTGPMCDQCADGF 504
Query: 203 YDFGEAGCKSCEC-NPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
++F + C CEC G++KN P CD G C CK +G C
Sbjct: 505 FNFPD--CIPCECAQQPGAIKNAP-CDKESGACVCKPAFDGDSCE 546
>gi|219842266|ref|NP_996816.2| usherin isoform B [Homo sapiens]
Length = 5202
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + N+Y + ++F C CNC+ G++N L CN S G+C CK
Sbjct: 813 GQCI-CKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCNKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 109/233 (46%), Gaps = 34/233 (14%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ + G C+ C + + D C C CN GS+N CN G+C+CK G +
Sbjct: 717 CKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y CK+C+C+ AGS+ T C++ GQC V+ R
Sbjct: 777 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQCICKP-----------NVEGR 824
Query: 146 K-------NFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKC 195
+ NF N + C D G++N L CN S G+C CK GVTG +C
Sbjct: 825 QCNKCLEGNFYLRQNNSFLCLPCNCD-----KTGTINGSLLCNKSTGQCPCKLGVTGLRC 879
Query: 196 DRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C+ + Y+ C+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 880 NQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 931
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK V+G +C++C Y+ E GC C CN +G+V C GQC+CK
Sbjct: 660 GQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQNSGQCKCKA 719
Query: 239 NVEGAQC 245
NV G +C
Sbjct: 720 NVIGLRC 726
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ G+V + C+S+ GQC S G+ + +
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHI--CNSLTGQCVCQDASIAGQRCDQCK- 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++C+D+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCVCQDASIAGQRCDQCKDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1026 FVTGSKCDACVPSASHLD 1043
>gi|91207975|sp|O75445.3|USH2A_HUMAN RecName: Full=Usherin; AltName: Full=Usher syndrome type IIa protein;
AltName: Full=Usher syndrome type-2A protein; Flags:
Precursor
gi|44804677|gb|AAS47698.1| Usher syndrome 2A isoform B [Homo sapiens]
Length = 5202
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + N+Y + ++F C CNC+ G++N L CN S G+C CK
Sbjct: 813 GQCI-CKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCNKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 109/233 (46%), Gaps = 34/233 (14%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ + G C+ C + + D C C CN GS+N CN G+C+CK G +
Sbjct: 717 CKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y CK+C+C+ AGS+ T C++ GQC V+ R
Sbjct: 777 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQCICKP-----------NVEGR 824
Query: 146 K-------NFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKC 195
+ NF N + C D G++N L CN S G+C CK GVTG +C
Sbjct: 825 QCNKCLEGNFYLRQNNSFLCLPCNCD-----KTGTINGSLLCNKSTGQCPCKLGVTGLRC 879
Query: 196 DRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C+ + Y+ C+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 880 NQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 931
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK V+G +C++C Y+ E GC C CN +G+V C GQC+CK
Sbjct: 660 GQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQNSGQCKCKA 719
Query: 239 NVEGAQC 245
NV G +C
Sbjct: 720 NVIGLRC 726
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ G+V + C+S+ GQC S G+ + +
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHI--CNSLTGQCVCQDASIAGQRCDQCK- 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++C+D+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCVCQDASIAGQRCDQCKDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1026 FVTGSKCDACVPSASHLD 1043
>gi|432859182|ref|XP_004069053.1| PREDICTED: laminin subunit beta-3-like [Oryzias latipes]
Length = 1136
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 112/261 (42%), Gaps = 30/261 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CN + C FD L+ +G GG C +C GP C++C Y
Sbjct: 289 CECNNHAQSCHFDWALFESSGRRSGGVCDNCMHHTTGPQCDRCAPGYQPNPRSRMDRPDA 348
Query: 54 CTACNCNPIGSLNL-QC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNP 108
C C+C+ G+++ +C +S C+CK V G +CDRC Y AGC C C+P
Sbjct: 349 CIRCSCSSDGTVDGGRCEDSPDSCRCKEKVEGPRCDRCKTGFYGLSASNPAGCSPCSCSP 408
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
GS+ + C+ V GQC Q +GR D + W KR +
Sbjct: 409 DGSMSDV--CEPVTGQC-PCQPHFQGR-----------TCDRCSSGYWKPALSKRCEPCS 454
Query: 168 LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
S + C+ G+C C+PG G C C Y GC+ C+C+ GS+
Sbjct: 455 CDPTSSTSDACDQLTGQCWCRPGFGGRTCSECPDGSYGDPLTGCQRCQCDAEGSLPG--G 512
Query: 227 CDSVKGQCECKDNVEGAQCRS 247
CD G C C+ V GA+C S
Sbjct: 513 CDKQTGACRCQPGVTGARCDS 533
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 25/190 (13%)
Query: 20 TGHGGHCLD------CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNS 71
T GG C D C+ +GP C++C+ +Y S N C+ C+C+P GS++ C
Sbjct: 359 TVDGGRCEDSPDSCRCKEKVEGPRCDRCKTGFYGLSASNPAGCSPCSCSPDGSMSDVCEP 418
Query: 72 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
G+C C+P G CDRC ++ + C+ C C+P S + CD + GQC +
Sbjct: 419 VTGQCPCQPHFQGRTCDRCSSGYWKPALSKRCEPCSCDPTSSTSDA--CDQLTGQC-WCR 475
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKP 188
GR +E S G+ + +RC+ D GSL C+ + G C+C+P
Sbjct: 476 PGFGGRTCSECPDGSY------GDPLTGCQRCQCDAE-----GSLPGGCDKQTGACRCQP 524
Query: 189 GVTGDKCDRC 198
GVTG +CD C
Sbjct: 525 GVTGARCDSC 534
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 106/284 (37%), Gaps = 71/284 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSGD---NF 53
C C+G +NRC + + C DCQ + G NCE+C D Y ++ + D
Sbjct: 232 CMCHGHANRC-----VPQDSSVSPQC-DCQHNTAGLNCERCADLYNDLPWRAAEDGNTQT 285
Query: 54 CTACNCNPIGSL----NLQCNSEGRCQ------CKPGVTGDKCDRCDVNH-------YDF 96
C C CN S GR C TG +CDRC + D
Sbjct: 286 CKRCECNNHAQSCHFDWALFESSGRRSGGVCDNCMHHTTGPQCDRCAPGYQPNPRSRMDR 345
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW 156
+A C C C+ G+V G+CE + S R + E G R
Sbjct: 346 PDA-CIRCSCSSDGTVDG--------GRCEDSPDSCRCKEKVE------------GPRC- 383
Query: 157 DLRRCKRDTYPLGHG-------------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 202
RCK Y L GS++ C G+C C+P G CDRC +
Sbjct: 384 --DRCKTGFYGLSASNPAGCSPCSCSPDGSMSDVCEPVTGQCPCQPHFQGRTCDRCSSGY 441
Query: 203 YDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ + C+ C C+P S + CD + GQC C+ G C
Sbjct: 442 WKPALSKRCEPCSCDPTSSTSDA--CDQLTGQCWCRPGFGGRTC 483
>gi|339234671|ref|XP_003378890.1| laminin subunit beta-1 [Trichinella spiralis]
gi|316978498|gb|EFV61480.1| laminin subunit beta-1 [Trichinella spiralis]
Length = 1750
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 104/236 (44%), Gaps = 56/236 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNCN +NRC FD +Y +G GG C DCQ + G NCE C+ +Y+ S
Sbjct: 300 CNCNEHANRCHFDHAVYEASGFVSGGVCDDCQHNTMGKNCEMCKPYFYRDPDRALSDPYV 359
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C AC C+ GSLN C SE GRC CK V GD CD C +++ + G
Sbjct: 360 CRACECDLRGSLNQGICESETDSERNLISGRCHCKVHVVGDHCDACKNGYWNLDQDNPEG 419
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C +C CN G+V N CD G+C T R+ + N D R
Sbjct: 420 CTACTCNLLGTVNNE-GCDKRTGEC------------TCKRLVTGDNCD----------R 456
Query: 161 CKRDTYPLGH------------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C + Y L GG+ + C+ G+C+C+ +G +CD + +Y
Sbjct: 457 CLLEHYGLSEQLDGCKPCDCDIGGAYDNSCDVMNGQCRCRAHFSGRRCDIPESGYY 512
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 55 TACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
AC+CNP GS++ C+ G +CQCK V G +CD C + FG GC+SC+CN G++
Sbjct: 735 VACDCNPTGSVSGMCDQLGGQCQCKQNVLGRRCDVCAAGTFGFGPQGCRSCDCNSIGALD 794
Query: 114 NTPNCDSVKGQCE 126
N CDS GQC+
Sbjct: 795 NF--CDSNSGQCK 805
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 30/237 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C+ C + G C +C+CN IG+L+ C+S G+C+C+ V
Sbjct: 753 GGQC-QCKQNVLGRRCDVCAAGTF-GFGPQGCRSCDCNSIGALDNFCDSNSGQCKCREAV 810
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSV--KNTPNC----DSVKGQ-CESAQLSSRG 134
G +CD+C ++ F + C+ C+CN +V + T C D G CE QL G
Sbjct: 811 HGRQCDQCQPGYWGFPD--CRPCQCNGHANVCDQRTGACVDCRDLTAGHHCEQCQLGYYG 868
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR-CQCKPGVTGD 193
+ + R P G H S L SE C C+ G G+
Sbjct: 869 DPRLGVSIPCRPCPCPGG-----------PGSGFQHADSCYLDAVSESVVCNCRHGYEGE 917
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+CDRC N++ + G C+ C+CN +CD G+C +C N +G QC
Sbjct: 918 RCDRCITNYWGNPNELG-GSCERCDCNGNIDFDVPGSCDQKTGRCLKCTSNTDGYQC 973
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 82/228 (35%), Gaps = 64/228 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKP 79
G CL C + DG CE C ++ + C C CN +G+ ++ G+C C P
Sbjct: 959 GRCLKCTSNTDGYQCEHCMAGFFGDAQTQSCAKCVCNILGT-DITAGPCDRITGQCPCLP 1017
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G +CD C H+ GC+SC +CD + ++
Sbjct: 1018 NVVGRECDACASGHWKIASGRGCESC------------DCDEQGVEVDN----------- 1054
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
D PL LQCN +G+C CKPG G C
Sbjct: 1055 -------------------------DQRPL-------LQCNEFDGQCPCKPGRGGRTCGE 1082
Query: 198 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ ++ GC C+CN GS T C G C C G C
Sbjct: 1083 CENYYWGDPSTGCVRCQCNSIGS--ETLQCHRANGSCVCLPGSGGPNC 1128
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 26/141 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTAC 57
C CNG +N C RTG C+DC+ G +CE+C+ YY + G + C C
Sbjct: 831 CQCNGHANVC------DQRTGA---CVDCRDLTAGHHCEQCQLGYYGDPRLGVSIPCRPC 881
Query: 58 NC--------NPIGSLNLQCNSEGR-CQCKPGVTGDKCDRCDVNHY----DFGEAGCKSC 104
C S L SE C C+ G G++CDRC N++ + G C+ C
Sbjct: 882 PCPGGPGSGFQHADSCYLDAVSESVVCNCRHGYEGERCDRCITNYWGNPNELG-GSCERC 940
Query: 105 ECNPAGSVKNTPNCDSVKGQC 125
+CN +CD G+C
Sbjct: 941 DCNGNIDFDVPGSCDQKTGRC 961
>gi|363741472|ref|XP_003642506.1| PREDICTED: laminin subunit alpha-5, partial [Gallus gallus]
Length = 3601
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 105/227 (46%), Gaps = 36/227 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ +G C++C Y+ C C C+ +G+L C+S GRC CK G
Sbjct: 468 GQCL-CRTGFEGQLCDRCAPGYFNYP---LCQLCGCSAVGTLPGGCDSSGRCFCKAEFAG 523
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT----E 139
+C++C H+ + C +C C+ G+V N NC S GQC ++ G HT
Sbjct: 524 PRCEQCSSGHHSYPH--CYACSCDSRGAVDN--NC-SPAGQCR-CHVNFTG--HTCNQCA 575
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
L + P +C R+ GSL+ CN E G+C C+P VTG +CD C
Sbjct: 576 LGFYGYPSCTPC--------QCSRE-------GSLHSTCNQETGQCSCRPKVTGLRCDSC 620
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F C+ CNPAG V P+ G C C+ VEG C
Sbjct: 621 VPGAYGFPH--CEVGSCNPAGLVTADPSL--APGSCACRAYVEGPAC 663
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 103/260 (39%), Gaps = 61/260 (23%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNCNG + C++D E+ ++ GG C+DCQ G NCE+C YY +S D
Sbjct: 268 CNCNGHAYDCYYDPEVDRHKASKSREDKFEGGGVCIDCQHHTTGVNCERCIPGYY-RSPD 326
Query: 52 N------FCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C CNC + + GRC CKP TG+ C+ C + DF C
Sbjct: 327 HPIDSPYICYRCNCKSDFTDGTCEDLTGRCYCKPNYTGEHCNACAEGYLDF-----PHCY 381
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
PA + +T + PAG I C D
Sbjct: 382 PVPAFAYNDT-----------------------------GEQVLPAGQII----NC--DC 406
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
Y G G+ + G C CKP G CD+C HY C+ C+C+ G T
Sbjct: 407 YAGGTEGNACRKDPRVGMCVCKPNFQGTHCDQCTPGHYG---PLCQPCQCSGPGQYDGT- 462
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CDS GQC C+ EG C
Sbjct: 463 -CDSETGQCLCRTGFEGQLC 481
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 112/273 (41%), Gaps = 62/273 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C+CNG S++C G CL+CQ + +G +CE+C+D Y G C C
Sbjct: 1768 CHCNGHSDQCL---------PGSGICLNCQHNTEGDHCEQCKDGYVGSRNADGSLQCVGC 1818
Query: 58 NCN-PIGSLNLQCN-----SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
C + S N S +C CKPG G C+RC +Y G C P
Sbjct: 1819 PCPLSVASNNFAIGCVHKGSSTQCLCKPGYAGPNCERCAPGYY--GNPLVIGSSCQPCDC 1876
Query: 112 VKNT-PN-----CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
NT PN CDS+ G C + G V E+ C
Sbjct: 1877 SGNTDPNMLFSSCDSLTGTCMGCMHHTAG-VRCEV--------------------CAPGF 1915
Query: 166 YPLGHGGSLNLQCN-----------SEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSC 213
Y QCN G+C CK GVTG CD C+ +Y F G +GC+ C
Sbjct: 1916 YGDAVAAKNCTQCNCSPCGTDSCHPQTGQCFCKAGVTGQHCDHCEEGYYGFEGCSGCRRC 1975
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+C+ G++ ++ C + GQC C V G++C+
Sbjct: 1976 DCD-VGAMGSS--CHAQTGQCHCLPGVSGSRCQ 2005
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 94/223 (42%), Gaps = 53/223 (23%)
Query: 41 CRDNYYQKS--GDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
CRD+ S +N C C+ G+ QC G +C CK V G +C RC ++ F
Sbjct: 1328 CRDSAISLSLFYNNGAQPCQCHEAGARGSQCEPFGGQCPCKSNVIGRECSRCATGYWGF- 1386
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
C+ C+C T CD V GQC P +
Sbjct: 1387 -PNCRPCDCG-------TRLCDEVTGQC----------------------ICPPHTLKPE 1416
Query: 158 LRRCKRDTY---PL-----------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH 202
C+ T+ PL G L C+ + G+C+CKP V G +CD C +
Sbjct: 1417 CVVCEPQTFGCHPLIGCEDCNCSQPGVQELTELGCDVDSGQCKCKPNVIGRRCDLCAPGY 1476
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y + C+ C+C+P G+ + CD V GQC CK+NVEG +C
Sbjct: 1477 YHY--PSCRRCDCHPDGTEVSV--CDPVTGQCHCKENVEGPRC 1515
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 97/233 (41%), Gaps = 43/233 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C + G C +C +Y G CT C C+ GSL+ CN E G+C C+P VTG +CD
Sbjct: 562 CHVNFTGHTCNQCALGFY---GYPSCTPCQCSREGSLHSTCNQETGQCSCRPKVTGLRCD 618
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
C Y F C+ CNPAG V P+ G C R + E
Sbjct: 619 SCVPGAYGFPH--CEVGSCNPAGLVTADPSL--APGSCAC-------RAYVE-------- 659
Query: 148 FDPAGNR----IWDLR--------RCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
PA +R W+L CK +T G + Q N G+C CKP G C
Sbjct: 660 -GPACDRCKPLYWNLTPDNPYGCTSCKCETKGTISGIAECQQGN--GQCFCKPNTCGQFC 716
Query: 196 DRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C ++ GC+ C C+ GS+ P+C+ G C C+ N G C
Sbjct: 717 SACKDGYFSMENTNYFGCQGCRCDVGGSLG--PSCEERSGACRCRQNTRGPTC 767
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 53/237 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C+ C+ + G +C++C +Y C C C+ G + C+SE G+C C+ G
Sbjct: 423 GMCV-CKPNFQGTHCDQCTPGHY----GPLCQPCQCSGPGQYDGTCDSETGQCLCRTGFE 477
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELR 141
G CDRC ++++ C+ C C+ G++ CDS G+C A+ +
Sbjct: 478 GQLCDRCAPGYFNY--PLCQLCGCSAVGTLPG--GCDS-SGRCFCKAEFAGP-------- 524
Query: 142 VQSRKNFDPAGNRIWDLRRCKR-----DTYPLGHG------GSLNLQCNSEGRCQCKPGV 190
RC++ +YP + G+++ C+ G+C+C
Sbjct: 525 ------------------RCEQCSSGHHSYPHCYACSCDSRGAVDNNCSPAGQCRCHVNF 566
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
TG C++C + Y G C C+C+ GS+ +T C+ GQC C+ V G +C S
Sbjct: 567 TGHTCNQCALGFY--GYPSCTPCQCSREGSLHST--CNQETGQCSCRPKVTGLRCDS 619
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP--------IGSLNLQCNS- 71
G CL C+ GPNCE+C YY G+ +C P L C+S
Sbjct: 1837 GSSTQCL-CKPGYAGPNCERCAPGYY---GNPLVIGSSCQPCDCSGNTDPNMLFSSCDSL 1892
Query: 72 EGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCE-S 127
G C C G +C+ C Y A C C C+P G T +C GQC
Sbjct: 1893 TGTCMGCMHHTAGVRCEVCAPGFYGDAVAAKNCTQCNCSPCG----TDSCHPQTGQCFCK 1948
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
A ++ + H E + F+ RRC D G++ C+++ G+C C
Sbjct: 1949 AGVTGQHCDHCE---EGYYGFEGCSG----CRRCDCDV------GAMGSSCHAQTGQCHC 1995
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
PGV+G +C +C ++ F E GC+ CEC GS CD G+C C + + G QC
Sbjct: 1996 LPGVSGSRCQQCAPGYWGFSERGCRKCECR-GGS------CDPRTGECTCSNGLTGKQC 2047
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 42/191 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G C+ C G CE C +Y GD CT CNC+P G+ + C+ + G+C CK
Sbjct: 1894 GTCMGCMHHTAGVRCEVCAPGFY---GDAVAAKNCTQCNCSPCGTDS--CHPQTGQCFCK 1948
Query: 79 PGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
GVTG CD C+ +Y F G +GC+ C+C+ G++ ++ C + GQC S R
Sbjct: 1949 AGVTGQHCDHCEEGYYGFEGCSGCRRCDCD-VGAMGSS--CHAQTGQCHCLPGVSGSRC- 2004
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS------EGRCQCKPGVT 191
++C + G +C G C C G+T
Sbjct: 2005 ---------------------QQCAPGYWGFSERGCRKCECRGGSCDPRTGECTCSNGLT 2043
Query: 192 GDKCDRCDVNH 202
G +CD C N+
Sbjct: 2044 GKQCDVCMHNY 2054
>gi|163716977|gb|ABY40628.1| alpha 3,4,5-laminin [Ciona savignyi]
Length = 3777
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 97/221 (43%), Gaps = 31/221 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C C G +C+ CR Y+ G C C C GSL+ C+S GRC CK
Sbjct: 561 GQCF-CGDKYSGQSCDDCRSGYF---GFPVCQECQCTAPGSLDNTCDSRSGRCHCKRNYQ 616
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G+ C+ C Y G C SC+CN GS + T CD GQC L
Sbjct: 617 GESCEECAPEFY--GYPNCVSCDCNVRGSQRTT--CDQTNGQCLC------------LPN 660
Query: 143 QSRKNFDPAGNRIWDLRRCK------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
++ D ++ RC+ R + G L + G+C+CKP V G CD
Sbjct: 661 IGGRSCDHCTPDYFNFPRCEECSCDARGIESVVQGVCLAF---TTGQCECKPNVIGRNCD 717
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
C +HYD + GC SC C G++ +CDS GQC CK
Sbjct: 718 MCKPSHYDL-DQGCVSCNCFIQGTLDGVGDCDSDDGQCFCK 757
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 112/265 (42%), Gaps = 47/265 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C +D+++ R GG CL+CQ G NCE+C Y++ S
Sbjct: 337 CNCHGHTTECEYDEDVARRRLSLDLAGNYEGGGVCLNCQHHTAGINCEQCASGYWRPSNV 396
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
N C C+C+ ++ + GRC CK GD+CD C +YDF E C++C+C
Sbjct: 397 DPRDPNGCRPCDCDSTYTVGSCEPNTGRCYCKVQYAGDRCDSCAPGYYDFPE--CRACDC 454
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF-----DPAGNRIWDLRRC 161
G++ + C V C + NF D ++ +C
Sbjct: 455 YYNGTLNDV--CLPVGDACP-----------------CKYNFAGKYCDECAAGFYNFPQC 495
Query: 162 KRDTYP-LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
D G G + ++ G C C G G C C ++++ C+ C C+ G+
Sbjct: 496 --DVCECTGEGVASDVCDPYTGACPCADGFAGPSCTECASGYFNY--PLCQRCPCSDVGT 551
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ N CD V GQC C D G C
Sbjct: 552 IGNV--CDPVTGQCFCGDKYSGQSC 574
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 24/175 (13%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C+P V G +C+RC FG C+ C+C A CD+V G C +++
Sbjct: 1409 GQCPCRPNVIGRQCERCRTGF--FGYPDCQPCDCGGA-------MCDTVDGNC-ICPINT 1458
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
+ + + +FDP ++ C D P G + C+ ++G+C CK V
Sbjct: 1459 VAPACNQCKPLTH-SFDP-------IQGCLECDCNPEGVENVTDRGCSVTDGQCNCKDTV 1510
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
TG +CDRC + FG C+ C+C+ G V + C+ V GQC CK NV+G QC
Sbjct: 1511 TGQRCDRCKPGY--FGFPNCQKCQCDVRGRVSD--GCNPVTGQCLCKPNVDGLQC 1561
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 103/235 (43%), Gaps = 47/235 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G +CE+C +Y G C +C+CN GS C+ + G+C C P + G CD
Sbjct: 611 CKRNYQGESCEECAPEFY---GYPNCVSCDCNVRGSQRTTCDQTNGQCLCLPNIGGRSCD 667
Query: 88 RCDVNHYDFGEAGCKSCECNPAG--SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
C ++++F C+ C C+ G SV GQCE + + GR
Sbjct: 668 HCTPDYFNFPR--CEECSCDARGIESVVQGVCLAFTTGQCE-CKPNVIGR---------- 714
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNL--QCNSE-GRCQCKPGVTGD 193
+ CK Y L G G+L+ C+S+ G+C CKP
Sbjct: 715 -----------NCDMCKPSHYDLDQGCVSCNCFIQGTLDGVGDCDSDDGQCFCKPYTCTQ 763
Query: 194 KCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C +C Y E GC SCEC+ G++ T CD GQC+C+ V G +C
Sbjct: 764 RCSQCVDGFYSLEELNYLGCTSCECDIGGAM--TVACDKNTGQCQCRSGVAGRRC 816
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 92/225 (40%), Gaps = 47/225 (20%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 93
GP+C +C Y+ C C C+ +G++ C+ G+C C +G CD C +
Sbjct: 525 GPSCTECASGYFNYP---LCQRCPCSDVGTIGNVCDPVTGQCFCGDKYSGQSCDDCRSGY 581
Query: 94 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
FG C+ C+C GS+ NT CDS G+C H + Q
Sbjct: 582 --FGFPVCQECQCTAPGSLDNT--CDSRSGRC-----------HCKRNYQGES------- 619
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCN-----------SEGRCQCKPGVTGDKCDRCDVNH 202
C + Y G+ ++ CN + G+C C P + G CD C ++
Sbjct: 620 ----CEECAPEFY--GYPNCVSCDCNVRGSQRTTCDQTNGQCLCLPNIGGRSCDHCTPDY 673
Query: 203 YDFGEAGCKSCECNPAG--SVKNTPNCDSVKGQCECKDNVEGAQC 245
++F C+ C C+ G SV GQCECK NV G C
Sbjct: 674 FNFPR--CEECSCDARGIESVVQGVCLAFTTGQCECKPNVIGRNC 716
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G C DC + G CE+C D Y+ GD C+ C+C+ G+ ++ + G C C P
Sbjct: 1955 GECTDCMFNTGGKYCERCADGYF---GDAIIARNCSECSCDSCGT-DICDHVMGHCSCMP 2010
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCEC--NPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
V G+ CD C+ ++F +GC++C C GSV CD GQCE A
Sbjct: 2011 HVIGNLCDTCEPGFFNFQSCSGCQNCACAEGALGSV-----CDVNSGQCECA-------- 2057
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCK----RDTYPLGHGGSLNLQCN-SEGRCQCKPGVT 191
V R + G + CK R+ P CN G+C+C PG++
Sbjct: 2058 --PNIVGVRCDTCAPGFYEYSAMGCKPCNCRNNGP----------CNRMNGQCECPPGIS 2105
Query: 192 GDKCDRCDVNHYDFGEAGCKSCE 214
G +CD+C++ + G + CE
Sbjct: 2106 GVQCDQCELARHIL-PPGARECE 2127
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ----CNSEGRCQCKP 79
G+C+ C + P C +C+ + C C+CNP G N+ ++G+C CK
Sbjct: 1450 GNCI-CPINTVAPACNQCKPLTHSFDPIQGCLECDCNPEGVENVTDRGCSVTDGQCNCKD 1508
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CDRC + FG C+ C+C+ G V + C+ V GQC
Sbjct: 1509 TVTGQRCDRCKPGY--FGFPNCQKCQCDVRGRVSD--GCNPVTGQC 1550
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 104/262 (39%), Gaps = 68/262 (25%)
Query: 24 GHCL-----------DCQGDRDGPNCEKCRDNYY--QKSGD-NFCTACNCN-PIGSLNL- 67
GHC+ DC + G NC+ C D Y SG+ + C C C P+ N
Sbjct: 1832 GHCITCDKVGPIKSSDCLHNTGGKNCDVCVDGYIGNATSGEVDACQPCPCPFPMEDGNFA 1891
Query: 68 ----QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT-PN----- 117
+ + E C C+ G TG +C+ C N Y FG C P N PN
Sbjct: 1892 DTCEELDGELVCHCQVGYTGARCELC-ANGY-FGNPAVYGGSCQPCNCHGNLDPNLIMET 1949
Query: 118 CDSVKGQCESAQLSSRGRV-------HTELRVQSRK----NFDPAGNRIWDLRRCKRDTY 166
CD + G+C ++ G+ + + +R + D G I D +
Sbjct: 1950 CDPLTGECTDCMFNTGGKYCERCADGYFGDAIIARNCSECSCDSCGTDICD--------H 2001
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCEC--NPAGSVKN 223
+GH C C P V G+ CD C+ ++F +GC++C C GSV
Sbjct: 2002 VMGH-------------CSCMPHVIGNLCDTCEPGFFNFQSCSGCQNCACAEGALGSV-- 2046
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD GQCEC N+ G +C
Sbjct: 2047 ---CDVNSGQCECAPNIVGVRC 2065
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 95/250 (38%), Gaps = 68/250 (27%)
Query: 35 GPNCEKCRDNYYQKS-------GDNFCTACNCNPIG--------------SLNLQCNSEG 73
G +CE+C + + QK+ N C ACNC+ SL+L N EG
Sbjct: 308 GDSCERCCEGFVQKAWRAAVPESTNQCEACNCHGHTTECEYDEDVARRRLSLDLAGNYEG 367
Query: 74 R---CQCKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNPAGSVKNTPNCDSVKGQ 124
C+ G C++C ++ GC+ C+C+ +V G
Sbjct: 368 GGVCLNCQHHTAGINCEQCASGYWRPSNVDPRDPNGCRPCDCDSTYTV----------GS 417
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNR-------IWDLRRCKR-DTYPLGHGGSLNL 176
CE + GR + +++ AG+R +D C+ D Y + G+LN
Sbjct: 418 CE----PNTGRCYCKVQY--------AGDRCDSCAPGYYDFPECRACDCY---YNGTLND 462
Query: 177 QCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C G C CK G CD C Y+F + C CEC G + CD G C
Sbjct: 463 VCLPVGDACPCKYNFAGKYCDECAAGFYNFPQ--CDVCECTGEGVASDV--CDPYTGACP 518
Query: 236 CKDNVEGAQC 245
C D G C
Sbjct: 519 CADGFAGPSC 528
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 38 CEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C +C D +Y N+ CT+C C+ G++ + C+ + G+CQC+ GV G +C+R
Sbjct: 765 CSQCVDGFYSLEELNYLGCTSCECDIGGAMTVACDKNTGQCQCRSGVAGRRCNRA 819
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C+ C +Y+ S C CNC G N G+C+C PG++G +CD
Sbjct: 2055 ECAPNIVGVRCDTCAPGFYEYSAMG-CKPCNCRNNGPCN---RMNGQCECPPGISGVQCD 2110
Query: 88 RCDVNHYDFGEAGCKSCE----CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+C++ + G + CE C + P D V+ S G VH R+Q
Sbjct: 2111 QCELARHIL-PPGARECERCSTCTDDLLDEIEPMTDEVRSAFLQLANISVG-VHAYRRLQ 2168
Query: 144 SRKNF 148
+N
Sbjct: 2169 DVQNM 2173
>gi|117168301|ref|NP_032506.2| laminin subunit alpha-1 precursor [Mus musculus]
gi|225000362|gb|AAI72652.1| Laminin, alpha 1 [synthetic construct]
gi|225356474|gb|AAI56302.1| Laminin, alpha 1 [synthetic construct]
Length = 3083
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 103/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C + DG +CE+C D +Y GD C AC+C+ GSL+ C+ E G C CK
Sbjct: 875 GECLKCLWNTDGAHCERCADGFY---GDAVTAKNCRACDCHENGSLSGICHLETGLCDCK 931
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC C C+ GSV + NC +GQC H
Sbjct: 932 PHVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSD--NCTE-EGQC-----------H 977
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPG 189
V ++ RC Y GG C + G C C P
Sbjct: 978 CGPGVSGKQ-----------CDRCSHGFYAFQDGGCTPCDCAHTQNNCDPASGECLCPPH 1026
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ ++ E GC++C C+ GS + CD + G C CK G C
Sbjct: 1027 TQGLKCEECEEAYWGLDPEQGCQACNCSAVGS--TSAQCDVLSGHCPCKKGFGGQSC 1081
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 95/239 (39%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C YY C CNC+ GS++ C EG+C C PGV+G +CD
Sbjct: 929 DCKPHVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSDNCTEEGQCHCGPGVSGKQCD 988
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y F + GC C+C NCD G+C
Sbjct: 989 RCSHGFYAFQDGGCTPCDC-----AHTQNNCDPASGEC---------------------- 1021
Query: 148 FDPAGNRIWDLRRCKRDTYPL-----------GHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
P + C+ + L GS + QC+ G C CK G G C
Sbjct: 1022 LCPPHTQGLKCEECEEAYWGLDPEQGCQACNCSAVGSTSAQCDVLSGHCPCKKGFGGQSC 1081
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK---------GQCECKDNVEGAQC 245
+C + + F + C C C+ G++ +T CD + G C CK+N G QC
Sbjct: 1082 HQCSLGYRSFPD--CVPCGCDLRGTLPDT--CDLEQGLCSCSEDGGTCSCKENAVGPQC 1136
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D + N G GG C++C + G NCE C D YY+
Sbjct: 334 CNCHNKAKDCYYDSSVAKERRSLNTAGQYSGGGVCVNCSQNTTGINCETCIDQYYRPHKV 393
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D+ C CNC+P+GSL+ C + G+C C+ G GDKCDRC +
Sbjct: 394 SPYDDHPCRPCNCDPVGSLSSVCIKDDRHADLANGKWPGQCPCRKGYAGDKCDRCQFGYR 453
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
F C C+C GS+ P
Sbjct: 454 GF--PNCIPCDCRTVGSLNEDP 473
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
CNCN S+ C D E G CL C+ G +CE C YY K GD CT
Sbjct: 1410 CNCNNHSDVC--DPE-------TGKCLSCRDHTSGDHCELCASGYYGKVTGLPGD--CTP 1458
Query: 57 CNC--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHYDFGEAG---CKSCEC 106
C C +P S + C EG RC C PG G C+RC ++ A C++C+C
Sbjct: 1459 CTCPHHPPFSFSPTCVVEGDSDFRCNACLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDC 1518
Query: 107 NPAGSVKNTPNCDSVKGQC 125
NP GSV + +CD GQC
Sbjct: 1519 NPQGSVHS--DCDRASGQC 1535
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C G CE+C + Y+ + C ACNC+ +GS + QC+ G C CK G
Sbjct: 1019 GECL-CPPHTQGLKCEECEEAYWGLDPEQGCQACNCSAVGSTSAQCDVLSGHCPCKKGFG 1077
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C +C + + F + C C C+ G++ +T CD +G C
Sbjct: 1078 GQSCHQCSLGYRSFPD--CVPCGCDLRGTLPDT--CDLEQGLC 1116
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 100/238 (42%), Gaps = 28/238 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC-------NPIGSLNLQCNSEG 73
G C C + G +CE+C +Y + C C C N + +L E
Sbjct: 762 GICSVCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCACPLSIDSNNFSPTCHLTDGEEV 821
Query: 74 RC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C QC PG +G C+RC +Y C C C+ +CDSV G+C
Sbjct: 822 VCDQCAPGYSGSWCERCADGYYGNPTVPGGTCVPCNCSGNVDPLEAGHCDSVTGECLKCL 881
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKP 188
++ G H E + F + R C D + GSL+ C+ E G C CKP
Sbjct: 882 WNTDG-AHCE---RCADGFYGDAVTAKNCRAC--DCH---ENGSLSGICHLETGLCDCKP 932
Query: 189 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG +CD+C +Y GC C C+ GSV + NC +GQC C V G QC
Sbjct: 933 HVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSD--NCTE-EGQCHCGPGVSGKQC 987
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C +G CE+C Y+ ++ C C+CNP GS++ C+ + G+C CKPG TG
Sbjct: 1486 CLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQGSVHSDCDRASGQCVCKPGATGLH 1545
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C++C H E+ C SC+ + G + N + DSV S L+
Sbjct: 1546 CEKCLPRHI-LMESDCVSCDDDCVGPLLN--DLDSVGDAVLSLNLT 1588
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 167 PLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVK 222
P + ++ +S+ RC C PG G C+RC ++ A C++C+CNP GSV
Sbjct: 1466 PFSFSPTCVVEGDSDFRCNACLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQGSVH 1525
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ +CD GQC CK G C
Sbjct: 1526 S--DCDRASGQCVCKPGATGLHC 1546
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ G GDKCDRC + F C C+C GS+ P + C CK NVE
Sbjct: 432 GQCPCRKGYAGDKCDRCQFGYRGF--PNCIPCDCRTVGSLNEDPCIEP----CLCKKNVE 485
Query: 242 GAQC 245
G C
Sbjct: 486 GKNC 489
>gi|126364|sp|P19137.1|LAMA1_MOUSE RecName: Full=Laminin subunit alpha-1; AltName: Full=Laminin A chain;
AltName: Full=Laminin-1 subunit alpha; AltName:
Full=Laminin-3 subunit alpha; AltName: Full=S-laminin
subunit alpha; Short=S-LAM alpha; Flags: Precursor
gi|309420|gb|AAA39410.1| laminin A chain [Mus musculus]
Length = 3084
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 103/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C + DG +CE+C D +Y GD C AC+C+ GSL+ C+ E G C CK
Sbjct: 875 GECLKCLWNTDGAHCERCADGFY---GDAVTAKNCRACDCHENGSLSGVCHLETGLCDCK 931
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC C C+ GSV + NC +GQC H
Sbjct: 932 PHVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSD--NCTE-EGQC-----------H 977
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPG 189
V ++ RC Y GG C + G C C P
Sbjct: 978 CGPGVSGKQ-----------CDRCSHGFYAFQDGGCTPCDCAHTQNNCDPASGECLCPPH 1026
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ ++ E GC++C C+ GS + CD + G C CK G C
Sbjct: 1027 TQGLKCEECEEAYWGLDPEQGCQACNCSAVGS--TSAQCDVLSGHCPCKKGFGGQSC 1081
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 95/237 (40%), Gaps = 48/237 (20%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C YY C CNC+ GS++ C EG+C C PGV+G +CD
Sbjct: 929 DCKPHVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSDNCTEEGQCHCGPGVSGKQCD 988
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y F + GC C+C NCD G+C
Sbjct: 989 RCSHGFYAFQDGGCTPCDC-----AHTQNNCDPASGEC---------------------- 1021
Query: 148 FDPAGNRIWDLRRCKRDTYPL-----------GHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
P + C+ + L GS + QC+ G C CK G G C
Sbjct: 1022 LCPPHTQGLKCEECEEAYWGLDPEQGCQACNCSAVGSTSAQCDVLSGHCPCKKGFGGQSC 1081
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
+C + + F + C C C+ G++ +T + C G C CK+NV G QC
Sbjct: 1082 HQCSLGYRSFPD--CVPCGCDLRGTLPDTCDLEQGLCSCSEDSGTCSCKENVVGPQC 1136
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D + N G GG C++C + G NCE C D YY+
Sbjct: 334 CNCHNKAKDCYYDSSVAKERRSLNTAGQYSGGGVCVNCSQNTTGINCETCIDQYYRPHKV 393
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D+ C CNC+P+GSL+ C + G+C C+ G GDKCDRC +
Sbjct: 394 SPYDDHPCRPCNCDPVGSLSSVCIKDDRHADLANGKWPGQCPCRKGYAGDKCDRCQFGYR 453
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
F C C+C GS+ P
Sbjct: 454 GF--PNCIPCDCRTVGSLNEDP 473
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
CNCN S+ C D E G CL C+ G +CE C YY K GD CT
Sbjct: 1410 CNCNNHSDVC--DPE-------TGKCLSCRDHTSGDHCELCASGYYGKVTGLPGD--CTP 1458
Query: 57 CNC--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHYDFGEAG---CKSCEC 106
C C +P S + C EG RC C PG G C+RC ++ A C++C+C
Sbjct: 1459 CTCPHHPPFSFSPTCVVEGDSDFRCNACLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDC 1518
Query: 107 NPAGSVKNTPNCDSVKGQC 125
NP GSV + +CD GQC
Sbjct: 1519 NPQGSVHS--DCDRASGQC 1535
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C G CE+C + Y+ + C ACNC+ +GS + QC+ G C CK G
Sbjct: 1019 GECL-CPPHTQGLKCEECEEAYWGLDPEQGCQACNCSAVGSTSAQCDVLSGHCPCKKGFG 1077
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C +C + + F + C C C+ G++ +T CD +G C
Sbjct: 1078 GQSCHQCSLGYRSFPD--CVPCGCDLRGTLPDT--CDLEQGLC 1116
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 100/238 (42%), Gaps = 28/238 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC-------NPIGSLNLQCNSEG 73
G C C + G +CE+C +Y + C C C N + +L E
Sbjct: 762 GICSVCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCACPLSIDSNNFSPTCHLTDGEEV 821
Query: 74 RC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C QC PG +G C+RC +Y C C C+ +CDSV G+C
Sbjct: 822 VCDQCAPGYSGSWCERCADGYYGNPTVPGGTCVPCNCSGNVDPLEAGHCDSVTGECLKCL 881
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKP 188
++ G H E + F + R C D + GSL+ C+ E G C CKP
Sbjct: 882 WNTDG-AHCE---RCADGFYGDAVTAKNCRAC--DCH---ENGSLSGVCHLETGLCDCKP 932
Query: 189 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG +CD+C +Y GC C C+ GSV + NC +GQC C V G QC
Sbjct: 933 HVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSD--NCTE-EGQCHCGPGVSGKQC 987
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C +G CE+C Y+ ++ C C+CNP GS++ C+ + G+C CKPG TG
Sbjct: 1486 CLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQGSVHSDCDRASGQCVCKPGATGLH 1545
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C++C H E+ C SC+ + G + N + DSV S L+
Sbjct: 1546 CEKCLPRHI-LMESDCVSCDDDCVGPLLN--DLDSVGDAVLSLNLT 1588
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 167 PLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVK 222
P + ++ +S+ RC C PG G C+RC ++ A C++C+CNP GSV
Sbjct: 1466 PFSFSPTCVVEGDSDFRCNACLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQGSVH 1525
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ +CD GQC CK G C
Sbjct: 1526 S--DCDRASGQCVCKPGATGLHC 1546
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ G GDKCDRC + F C C+C GS+ P + C CK NVE
Sbjct: 432 GQCPCRKGYAGDKCDRCQFGYRGF--PNCIPCDCRTVGSLNEDPCIEP----CLCKKNVE 485
Query: 242 GAQC 245
G C
Sbjct: 486 GKNC 489
>gi|410953440|ref|XP_003983378.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Felis
catus]
Length = 3394
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
GHC+ C+ +G C++C Y+ C C C+P+G+L C+ GRC C+PG G
Sbjct: 518 GHCV-CREGFEGAACDRCAPGYFHFP---LCQLCGCSPVGTLPEGCDEAGRCPCRPGFDG 573
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV--------KGQCESAQLSSRG- 134
CDRC H+ + + C +C C+P G++ V C+ G
Sbjct: 574 PHCDRCSPGHHGYPD--CHACTCDPRGALDQLCGAGGVCLCRPGYTGATCQECSPGFHGF 631
Query: 135 ---RVH-TELR----VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQ 185
R H T LR V NF C+ + +P G + + + ++ C
Sbjct: 632 CSCRPHVTGLRCDACVPGAYNFP----------TCEAGSCHPAGLAPADHTRPEAQAPCT 681
Query: 186 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C+ V G CDRC + + GC C C+P G++ C GQC CK +V G
Sbjct: 682 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDPRGTLGGVAECRPGDGQCSCKPHVCG 741
Query: 243 AQC 245
C
Sbjct: 742 QAC 744
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 103/247 (41%), Gaps = 48/247 (19%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ DGP+C++C ++ G C AC C+P G+L+ C + G C C+PG TG C
Sbjct: 567 CRPGFDGPHCDRCSPGHH---GYPDCHACTCDPRGALDQLCGAGGVCLCRPGYTGATCQE 623
Query: 89 CDVNHYDFGEAGCKSCECNP----------AGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
C + F C C P N P C++ G C A L+ HT
Sbjct: 624 CSPGFHGF-------CSCRPHVTGLRCDACVPGAYNFPTCEA--GSCHPAGLAPAD--HT 672
Query: 139 ELRVQS----RKNFD-PAGNR----IWDL--------RRCKRDTYPLGHGGSLNLQCNSE 181
Q+ R + + P+ +R W L RC D P G G + +
Sbjct: 673 RPEAQAPCTCRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCD--PRGTLGGVAECRPGD 730
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CKP V G C C + A GC+SC C+ G++ CD G C C+
Sbjct: 731 GQCSCKPHVCGQACAACRDGFFGLDRADYFGCRSCRCDVGGALGQ--GCDPRTGACRCRP 788
Query: 239 NVEGAQC 245
N +G C
Sbjct: 789 NTQGLTC 795
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 94/259 (36%), Gaps = 60/259 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ CF+D E+ R GG C+DCQ G NCE+C +++
Sbjct: 319 CNCHGHAHDCFYDPEVDRRNASQNLDGAYQGGGVCIDCQHHTTGINCERCLPGFFRAPDQ 378
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C GRC C+P TG++CD C F C
Sbjct: 379 PLDSPHACRRXXXXXXXXXXXXXXXTGRCYCRPNFTGERCDACAEGFAGFP-------RC 431
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
PA S N HT +V PAG + C D
Sbjct: 432 YPASSSPN----------------------HTGEQVL------PAGQIV----NC--DCS 457
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G G+ + GRC CKP G C+ C Y C+ C C+ G V +
Sbjct: 458 AAGTQGNACRKDPRVGRCVCKPAFQGVHCELCAPGFYG---PSCQPCRCSSPGVVDG--D 512
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD G C C++ EGA C
Sbjct: 513 CDPDSGHCVCREGFEGAAC 531
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 51/211 (24%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G++ C G +C C+ V G C RC ++ F C+ C+C
Sbjct: 1212 NNGARPCGCHEMGAMGPTCEPFGGQCPCRAHVIGRDCSRCATGYWGF--PSCRPCDCR-- 1267
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--- 166
G + CD + G+C V + P D C+ T+
Sbjct: 1268 GRL-----CDELTGRC----------------VCPPRTVPP------DCIVCQPQTFGCH 1300
Query: 167 PL-----------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
PL G + C+ + G+C+C+P V G +CD C + G C+ C+
Sbjct: 1301 PLVGCEECNCSGPGVQELTDPTCDMDSGQCKCRPNVAGRRCDTCAPGFH--GYPSCRPCD 1358
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ AGS CD + GQC CK+NV+G +C
Sbjct: 1359 CHEAGSTPGV--CDPLTGQCYCKENVQGLRC 1387
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 18/93 (19%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP--------IGSLNLQCNSE------GR 74
C+ G +CE+C ++ G+ +C P C +E G
Sbjct: 1731 CKPGYAGASCERCAPGFF---GNPMVLGSSCQPCDCSGNXXXXXXXSPCGTETCDPHSGH 1787
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCEC 106
C CKPGVTG +CDRC H+ F GC+ C C
Sbjct: 1788 CVCKPGVTGPRCDRCQEGHFGFQSCGGCRPCAC 1820
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCEC 215
G C CKPGVTG +CDRC H+ F GC+ C C
Sbjct: 1786 GHCVCKPGVTGPRCDRCQEGHFGFQSCGGCRPCAC 1820
>gi|354500239|ref|XP_003512208.1| PREDICTED: laminin subunit beta-2 [Cricetulus griseus]
gi|344254379|gb|EGW10483.1| Laminin subunit beta-2 [Cricetulus griseus]
Length = 1800
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 107/267 (40%), Gaps = 83/267 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG ++ C FD +Y +G+ GG C CQ + G +CE CR +Y +
Sbjct: 350 CECNGHAHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYHDPTKDMRDPAA 409
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P+GS + +C+S G+C+CK V G +C +C + + G
Sbjct: 410 CRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASDPVG 469
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CN G+V CDS G C
Sbjct: 470 CQRCQCNSRGTVPGATPCDSNSGAC----------------------------------F 495
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPA 218
CKR GHG CDRC H+ GC+ C+C+
Sbjct: 496 CKRLV--TGHG-----------------------CDRCLPGHWGLSHDLLGCRPCDCDVG 530
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+V P CD GQC C+ ++ G +C
Sbjct: 531 GAVD--PQCDEATGQCRCRQHMIGRRC 555
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C + +GP+C C+ ++ ++ C C CNP+G+ QC S
Sbjct: 1005 HTGQCLRCLYNTEGPHCGHCKPGFHGQAARQSCHRCTCNPLGTNPQQCPSTDQCRCDPSS 1064
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CD C N ++F GC+ C C+P + P C+ GQC
Sbjct: 1065 GQCPCLPHVQGLSCDHCAPNFWNFTSGRGCQPCACHP--TRARGPTCNEFTGQCH-CHAG 1121
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D G N QC+ S G C C+PGV
Sbjct: 1122 FGGRTCSE--CQKLHWGDPG----LQCRACDCDPR-----GIDNPQCHRSTGHCSCRPGV 1170
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1171 SGVRCDQC 1178
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +CN G +C CKPGV G +CD C Y FG AGC++C+C+P G
Sbjct: 780 NGALPCQCDPQGSLSSECNPHGGQCLCKPGVAGRRCDVCATGSYGFGPAGCQACQCSPDG 839
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 840 ALSAL--CEGTSGQC 852
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 107/273 (39%), Gaps = 52/273 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 879 CVCNGHADEC---------DTHTGACLGCRDYTGGEHCERCVAGFHGDPRLPYGGQCRPC 929
Query: 58 NCNPIGS-----LNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P G C+ +G C C+ G TG +C+ C H+ D + G C+ C
Sbjct: 930 PC-PEGPGSQRHFATSCHRDGYSQQIVCHCRAGYTGLRCEACAPGHFGDPSKPGGQCQLC 988
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQS--RKNFDPAGNR 154
EC+ + CD GQC ++ G H + QS R +P G
Sbjct: 989 ECSGNIDPTDPDACDPHTGQCLRCLYNTEGPHCGHCKPGFHGQAARQSCHRCTCNPLG-- 1046
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKS 212
T P + +C+ S G+C C P V G CD C N ++F GC+
Sbjct: 1047 ----------TNPQQCPSTDQCRCDPSSGQCPCLPHVQGLSCDHCAPNFWNFTSGRGCQP 1096
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P + P C+ GQC C G C
Sbjct: 1097 CACHP--TRARGPTCNEFTGQCHCHAGFGGRTC 1127
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C G G C C H+ C++C+C+P G + P C G C C+ V
Sbjct: 1114 GQCHCHAGFGGRTCSECQKLHWGDPGLQCRACDCDPRG--IDNPQCHRSTGHCSCRPGVS 1171
Query: 242 GAQC 245
G +C
Sbjct: 1172 GVRC 1175
>gi|354501735|ref|XP_003512944.1| PREDICTED: laminin subunit gamma-3, partial [Cricetulus griseus]
Length = 1146
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 95/201 (47%), Gaps = 23/201 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQ--CNS-EGR 74
H GHCL C + G +CE C D +Y + ++ C C+C+ GS + + CN G+
Sbjct: 402 HSGHCLRCLYNTTGAHCEHCLDGFYGSALATRPEDKCAPCSCDLRGSASKKTPCNPVTGQ 461
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C P VTG C C YD GC+SC+C+P GS++N C GQC
Sbjct: 462 CACLPHVTGRDCSHCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPC------ 513
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
R + R G I R C+ PLG +++ QC+ C C+PG G
Sbjct: 514 -RPGVTGQSCDRCQLGFFGFSIKGCRDCR--CSPLG---AVSSQCHENSTCVCRPGFVGY 567
Query: 194 KCDRCDVNHYDF-GEAGCKSC 213
KCDRC N + G+ GC+ C
Sbjct: 568 KCDRCQDNFFLLDGDTGCQEC 588
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 90/222 (40%), Gaps = 44/222 (19%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 349 CTHCPPGQRGRRCETCEDGFF---GDPLGLSGAPQPCHQCQC----SGNVDLNAVGNCDP 401
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C+ C Y A C C C+ GS C+ V GQ
Sbjct: 402 HSGHCLRCLYNTTGAHCEHCLDGFYGSALATRPEDKCAPCSCDLRGSASKKTPCNPVTGQ 461
Query: 125 CE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE- 181
C ++ R H P + R C+ +PLG SL +C+ +
Sbjct: 462 CACLPHVTGRDCSHC----------SPGFYDLQSGRGCQSCKCHPLG---SLENKCHPKT 508
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
G+C C+PGVTG CDRC + + F GC+ C C+P G+V +
Sbjct: 509 GQCPCRPGVTGQSCDRCQLGFFGFSIKGCRDCRCSPLGAVSS 550
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 96/239 (40%), Gaps = 28/239 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGRC-- 75
G CL C +GP+CE+C ++ G+ F C C C P S G
Sbjct: 295 GVCL-CGHHTEGPSCERCVPGFF---GNAFSGHADDCQPCPC-PGQSACTTIPETGEVVC 349
Query: 76 -QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
C PG G +C+ C+ + G +G C C+C+ + NCD G C
Sbjct: 350 THCPPGQRGRRCETCEDGFFGDPLGLSGAPQPCHQCQCSGNVDLNAVGNCDPHSGHCLRC 409
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
++ G H E F + +C + L S CN G+C C
Sbjct: 410 LYNTTG-AHCE---HCLDGFYGSALATRPEDKCAPCSCDLRGSASKKTPCNPVTGQCACL 465
Query: 188 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P VTG C C YD GC+SC+C+P GS++N C GQC C+ V G C
Sbjct: 466 PHVTGRDCSHCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPCRPGVTGQSC 522
>gi|118786046|ref|XP_315098.3| AGAP004993-PA [Anopheles gambiae str. PEST]
gi|116127696|gb|EAA10481.4| AGAP004993-PA [Anopheles gambiae str. PEST]
Length = 3704
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 96/224 (42%), Gaps = 34/224 (15%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
G C C YYQ C CNC+ GSL C ++G+CQCK G C +C Y
Sbjct: 614 GRQCTACLAGYYQYPE---CLPCNCDSYGSLAKSCTNDGQCQCKDNFDGKNCQQCREGFY 670
Query: 95 DFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQSRKNFDP 150
+F C+ C C+PAG + C SV QC + RVH + + R +
Sbjct: 671 NF--PACEECNCDPAGVIPRFAGCGSVPAGELCQC-------KERVHGRICDKCRPLY-- 719
Query: 151 AGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD 204
W+L + + G G+L+ G+C CKP VTG +C C +D
Sbjct: 720 -----WNLTASNPHGCQECECFIDGTIGALDTCDTKSGQCACKPSVTGRQCTECKDGTFD 774
Query: 205 -FGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
FG GCK C C+ G+ N C+ GQC C V G C
Sbjct: 775 LFGSNLFGCKDCGCDIGGAADNV--CNKETGQCRCHPRVSGRTC 816
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 116/276 (42%), Gaps = 54/276 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCN-PIGSLNLQCN-------SE 72
G C DCQ G +C++C + YY + N C C C P+ S N + E
Sbjct: 1820 GICHDCQHYTTGEHCDQCIEGYYGNATRGTPNDCMICACPLPVESNNFATSCEVSEDGYE 1879
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C CKPG G+KC C +Y + CK C+C+ + + CDSV G+C
Sbjct: 1880 IHCACKPGYHGEKCQSCAPGYYGQPQVEGEFCKPCDCSGNINAEEPGACDSVSGECLLCL 1939
Query: 130 LSSRGRV-----------HTELR-----VQSRKNFDPAGNRIWDLR-----------RCK 162
++ GR L+ + + D N I RC+
Sbjct: 1940 NNTYGRACNLCAPGFYGDAINLKDCQSCICDKTGMDYCDNFIGTCNCLPNVIGEKCDRCE 1999
Query: 163 RDTYPLGHG----------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
D Y G S + QC+ G+C CKPGVTG +CDRC+ ++++ E GC
Sbjct: 2000 EDHYGFESGRGCTPCDCGIASNSSQCDDHTGKCACKPGVTGRQCDRCEPGYWNYSEEGCV 2059
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C CN S C+++ GQCEC V G +C S
Sbjct: 2060 PCSCNTDYS--RGLGCNALTGQCECLSGVVGEKCDS 2093
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 113/269 (42%), Gaps = 55/269 (20%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G S+ C + +E+ + GG C +CQ + G NC +C D +Y+ G
Sbjct: 335 CNCHGHSDECIYSEEIDEKGLSLDIHGNYEGGGVCQNCQHNTKGINCNQCEDKFYRPYGR 394
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C C+C+ S C E GRC+C+ CD C H FG C+ CE
Sbjct: 395 FWNETDVCQPCDCDHFYSTG-NCEEETGRCECRAEFEPPLCDACSYGH--FGYPNCRQCE 451
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
CN G++ C++V G C + NFD ++C ++
Sbjct: 452 CNLNGTIGYY--CEAVNGTCP-----------------CKHNFDGP-----HCKQCAKEY 487
Query: 166 YPL--------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
Y GS++ C+ G+CQC+P G CD C Y + + C C C+
Sbjct: 488 YGFPDCDPCDCNMHGSVDSVCDEGSGQCQCRPNFAGRLCDSCKDGFYRYPD--CTYCNCD 545
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ CD G C C++ G +C
Sbjct: 546 VRGTLDEV--CDKNSGTCLCREGYGGPRC 572
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 101/233 (43%), Gaps = 37/233 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ GP C++C YY C CNC+ GS + C+ GRC C G
Sbjct: 559 GTCL-CREGYGGPRCDQCIPGYYNYPD---CVPCNCSSAGSTSTVCDITGRCSCLENFGG 614
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+C C +Y + E C C C+ GS+ + D GQC+ + G+ + R +
Sbjct: 615 RQCTACLAGYYQYPE--CLPCNCDSYGSLAKSCTND---GQCQCKD-NFDGKNCQQCR-E 667
Query: 144 SRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
NF DPAG I C + P G CQCK V G C
Sbjct: 668 GFYNFPACEECNCDPAG-VIPRFAGCG--SVPAGE------------LCQCKERVHGRIC 712
Query: 196 DRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D+C +++ + GC+ CEC G++ CD+ GQC CK +V G QC
Sbjct: 713 DKCRPLYWNLTASNPHGCQECECFIDGTIGALDTCDTKSGQCACKPSVTGRQC 765
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 111/271 (40%), Gaps = 52/271 (19%)
Query: 3 CNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKC-RDNYY-QKSGDNFC---- 54
NG S R + D L H G + D+ + C +D++Y Q + +FC
Sbjct: 1298 LNGGSTRLWVDYVLLVPADQFHNGLLQEETFDQTNAFIQNCGQDHFYIQTNASDFCKKAV 1357
Query: 55 -----------TACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCK 102
CNC+ GS + +C G +CQCK + G KC+ C Y F + CK
Sbjct: 1358 FSLTADYNSGALPCNCDYFGSTSFECEPFGGQCQCKAHIIGRKCEACKTGFYGFPD--CK 1415
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK-----NFDPAGNRIWD 157
C C +T C G+C RV K + ++I
Sbjct: 1416 PCNC------PSTAQCHKDTGECVCPD-----------RVTGEKCDQCVPYTFGFDQIIG 1458
Query: 158 LRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
C + PLG + NLQC+ E G C+CK V G KCDRC ++F C+ C C+
Sbjct: 1459 CEECNCN--PLGVANN-NLQCDMESGLCECKSNVVGRKCDRCQYGFFNF--PYCEPCHCD 1513
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
G+ CD C CK NV+G +C +
Sbjct: 1514 IRGTTFEI--CDQTDESCFCKKNVQGRECNT 1542
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 21/184 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL-----QCNSEGRCQCKPGVTG 83
C+ + DG NC++CR+ +Y C CNC+P G + + CQCK V G
Sbjct: 653 CKDNFDGKNCQQCREGFYNFPA---CEECNCDPAGVIPRFAGCGSVPAGELCQCKERVHG 709
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
CD+C +++ + GC+ CEC G++ CD+ GQC + + S GR TE
Sbjct: 710 RICDKCRPLYWNLTASNPHGCQECECFIDGTIGALDTCDTKSGQC-ACKPSVTGRQCTEC 768
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCD 199
+ FD G+ ++ + C D GG+ + CN E G+C+C P V+G C
Sbjct: 769 K---DGTFDLFGSNLFGCKDCGCDI-----GGAADNVCNKETGQCRCHPRVSGRTCSYPL 820
Query: 200 VNHY 203
HY
Sbjct: 821 TTHY 824
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 96/221 (43%), Gaps = 31/221 (14%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + DGP+C++C YY G C C+CN GS++ C+ G+CQC+P G CD
Sbjct: 471 CKHNFDGPHCKQCAKEYY---GFPDCDPCDCNMHGSVDSVCDEGSGQCQCRPNFAGRLCD 527
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
C Y + + C C C+ G++ CD G C + G + + N
Sbjct: 528 SCKDGFYRYPD--CTYCNCDVRGTLDEV--CDKNSGTCLCRE--GYGGPRCDQCIPGYYN 581
Query: 148 FDPAGNRIWDLRRCKRDTYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF 205
+ D P GS + C+ GRC C G +C C +Y +
Sbjct: 582 YP--------------DCVPCNCSSAGSTSTVCDITGRCSCLENFGGRQCTACLAGYYQY 627
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
E C C C+ GS+ + D GQC+CKDN +G C+
Sbjct: 628 PE--CLPCNCDSYGSLAKSCTND---GQCQCKDNFDGKNCQ 663
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 84/208 (40%), Gaps = 45/208 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C + G C C +Y GD C +C C+ G ++ N G C C P
Sbjct: 1933 GECLLCLNNTYGRACNLCAPGFY---GDAINLKDCQSCICDKTG-MDYCDNFIGTCNCLP 1988
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G+KCDRC+ +HY F GC C+C G N+ CD G+C + + GR
Sbjct: 1989 NVIGEKCDRCEEDHYGFESGRGCTPCDC---GIASNSSQCDDHTGKC-ACKPGVTGR--- 2041
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-----------GRCQCK 187
RC+ + G + CN++ G+C+C
Sbjct: 2042 ------------------QCDRCEPGYWNYSEEGCVPCSCNTDYSRGLGCNALTGQCECL 2083
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
GV G+KCD C + GC+ C+
Sbjct: 2084 SGVVGEKCDSCPYRWVLIPDTGCQECDV 2111
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ F + F + GG C C+ G CE C+ +Y G C CNC
Sbjct: 1371 CNCDYFGSTSFECEPF------GGQC-QCKAHIIGRKCEACKTGFY---GFPDCKPCNCP 1420
Query: 61 PIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNC 118
QC+ + G C C VTG+KCD+C + F + GC+ C CNP G N C
Sbjct: 1421 STA----QCHKDTGECVCPDRVTGEKCDQCVPYTFGFDQIIGCEECNCNPLGVANNNLQC 1476
Query: 119 DSVKGQCE 126
D G CE
Sbjct: 1477 DMESGLCE 1484
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
H G C C+ G C++C Y+ S + C C+CN S L CN+ G+C+C G
Sbjct: 2028 HTGKCA-CKPGVTGRQCDRCEPGYWNYSEEG-CVPCSCNTDYSRGLGCNALTGQCECLSG 2085
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCEC 106
V G+KCD C + GC+ C+
Sbjct: 2086 VVGEKCDSCPYRWVLIPDTGCQECDV 2111
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
G++ C + G C CK G C +C +Y F + C C+CN GSV + CD
Sbjct: 456 GTIGYYCEAVNGTCPCKHNFDGPHCKQCAKEYYGFPD--CDPCDCNMHGSVDSV--CDEG 511
Query: 231 KGQCECKDNVEGAQCRS 247
GQC+C+ N G C S
Sbjct: 512 SGQCQCRPNFAGRLCDS 528
>gi|31982223|ref|NP_032509.2| laminin subunit beta-2 precursor [Mus musculus]
gi|341940890|sp|Q61292.2|LAMB2_MOUSE RecName: Full=Laminin subunit beta-2; AltName: Full=Laminin-11
subunit beta; AltName: Full=Laminin-14 subunit beta;
AltName: Full=Laminin-15 subunit beta; AltName:
Full=Laminin-3 subunit beta; AltName: Full=Laminin-4
subunit beta; AltName: Full=Laminin-7 subunit beta;
AltName: Full=Laminin-9 subunit beta; AltName:
Full=S-laminin subunit beta; Short=S-LAM beta; Flags:
Precursor
gi|19913504|gb|AAH26051.1| Laminin, beta 2 [Mus musculus]
gi|148689344|gb|EDL21291.1| laminin, beta 2, isoform CRA_a [Mus musculus]
gi|148689345|gb|EDL21292.1| laminin, beta 2, isoform CRA_a [Mus musculus]
Length = 1799
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 109/267 (40%), Gaps = 83/267 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG ++ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 350 CECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAV 409
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P+GS + +C+S G+C+CK V G +C +C + + G
Sbjct: 410 CRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASDPRG 469
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CN G+V + CDS G C
Sbjct: 470 CQRCQCNSRGTVPGSSPCDSSSGTC----------------------------------F 495
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPA 218
CKR GHG CDRC H+ GC+ C+C+
Sbjct: 496 CKRLV--TGHG-----------------------CDRCLPGHWGLSHDLLGCRPCDCDVG 530
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ P CD GQC C+ ++ G +C
Sbjct: 531 GALD--PQCDEATGQCRCRQHMIGRRC 555
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +C+ G +C+CKPGV G +CD C +Y FG AGC++C+C+P G
Sbjct: 779 NGALPCQCDPQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYGFGPAGCQACQCSPDG 838
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 839 ALSAL--CEGTSGQC 851
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C + +GP+C C+ ++ ++ C C CN +G+ +C S
Sbjct: 1004 HTGQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLLGTDPRRCPSTDLCHCDPST 1063
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CD C N ++F GC+ C C+P S P C+ GQC
Sbjct: 1064 GQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQPCACHP--SRARGPTCNEFTGQCH-CHAG 1120
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D G QC+ S G C C+PGV
Sbjct: 1121 FGGRTCSE--CQELYWGDPG----LQCRACDCDPR-----GIDKPQCHRSTGHCSCRPGV 1169
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1170 SGVRCDQC 1177
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 99/243 (40%), Gaps = 40/243 (16%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ G C+ C YY G C AC C+P G+L+ C + G+C C+PG
Sbjct: 799 HGGQC-RCKPGVVGRRCDVCATGYY-GFGPAGCQACQCSPDGALSALCEGTSGQCPCRPG 856
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR----- 135
G +CD C + F C+ C CN CD+ G C + + G
Sbjct: 857 AFGLRCDHCQRGQWGF--PNCRPCVCN-----GRADECDTHTGACLGCRDYTGGEHCERC 909
Query: 136 ---VHTELRVQSRKNFDP------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
H + R+ P G++ C RD Y + + CQC
Sbjct: 910 IAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHRDGY------------SQQIVCQC 957
Query: 187 KPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEG 242
+ G TG +C+ C H+ D + G C+ CEC+ + CD GQC C N EG
Sbjct: 958 REGYTGLRCEACAPGHFGDPSKPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHNTEG 1017
Query: 243 AQC 245
C
Sbjct: 1018 PHC 1020
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 110/274 (40%), Gaps = 54/274 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 878 CVCNGRADEC---------DTHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPC 928
Query: 58 NCNPIGS-----LNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P G C+ +G CQC+ G TG +C+ C H+ D + G C+ C
Sbjct: 929 PC-PEGPGSQRHFATSCHRDGYSQQIVCQCREGYTGLRCEACAPGHFGDPSKPGGRCQLC 987
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQS--RKNFDPAGNR 154
EC+ + CD GQC ++ G H + QS R + G
Sbjct: 988 ECSGNIDPMDPDACDPHTGQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLLGT- 1046
Query: 155 IWDLRRCKRDTYPLGHGGSLNL-QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
D RRC S +L C+ S G+C C P V G CD C N ++F GC+
Sbjct: 1047 --DPRRCP----------STDLCHCDPSTGQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQ 1094
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S P C+ GQC C G C
Sbjct: 1095 PCACHP--SRARGPTCNEFTGQCHCHAGFGGRTC 1126
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C G G C C ++ C++C+C+P G K P C G C C+ V
Sbjct: 1113 GQCHCHAGFGGRTCSECQELYWGDPGLQCRACDCDPRGIDK--PQCHRSTGHCSCRPGVS 1170
Query: 242 GAQC 245
G +C
Sbjct: 1171 GVRC 1174
>gi|312379797|gb|EFR25965.1| hypothetical protein AND_08260 [Anopheles darlingi]
Length = 1415
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 56/228 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + C FD+ +Y +G GG C +CQ + G +CE+C YY+ ++
Sbjct: 329 CNCNNHATSCHFDQAVYEHSGRVSGGVCDNCQHNTQGYHCEECAPFYYRDPNEDIQSPYV 388
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C AC+C+P GSL+ C+S G C CK V G +CD+C ++F E+ G
Sbjct: 389 CKACDCDPRGSLDDGVCDSIADEENGIEAGACHCKRNVNGRRCDQCREGFWNFDESNPDG 448
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+SC CN G+V N+ C+ G+C +L + GR D +
Sbjct: 449 CQSCTCNTLGTVNNS-GCNVYTGECICKRLVT-GR---------------------DCNQ 485
Query: 161 CKRDTYPLGH------------GGSLNLQCNS-EGRCQCKPGVTGDKC 195
C +TY L GGSL+ C+ G+C+C+P + G C
Sbjct: 486 CMPETYGLSDSLEGCTACACHPGGSLDNSCDVITGQCRCRPHMQGRDC 533
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 109/283 (38%), Gaps = 61/283 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG + C G C+ CQ G C++C D YY
Sbjct: 854 CECNGHTPTC---------DSKTGECVQCQDFTQGWKCDRCLDGYYGNPLLGSSIGCRPC 904
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--- 98
SG ++ C +P ++ C C G G +CD C N++ E
Sbjct: 905 RCPDTTASGHSYANECYLHP-------STNDVICSCDQGYAGARCDVCADNYFGNPEKPG 957
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
C+ CECN +K + NCDS G+C+ ++ G H E R + R D
Sbjct: 958 GVCQECECNNNVDLKRSGNCDSRTGKCQQCLYNTEGD-HCEY---CRDGYYGDAFR-QDC 1012
Query: 159 RRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNP 217
R C D LG ++ G+C C V G CD C NH+ GC++C+C+P
Sbjct: 1013 RAC--DCNLLGTNQTIAHCDRYTGQCPCLRNVKGQYCDECIENHWKIASGEGCEACDCDP 1070
Query: 218 AGSVKN---------------TPNCDSVKGQCECKDNVEGAQC 245
G++ T CD V GQC C + G +C
Sbjct: 1071 VGALNEQCNPVTCDCNVYGAATQQCDRVTGQCVCNLGIGGYKC 1113
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGD 84
D +++ P E+CR+ S +N +AC CNP GS++ C S G C CK V G
Sbjct: 731 DVNYEKNAP--EECRELLKAISVYINNGASACECNPTGSMSKTCAESGGYCACKTNVIGR 788
Query: 85 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+CD+C Y FG GCK+C+CN GS N +CD + GQC
Sbjct: 789 QCDQCAPGTYGFGPEGCKACDCNSIGSKDN--DCDLITGQC 827
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G C CK V G +CD+C ++F E+ GC+SC CN G+V N+ C+ G+C CK
Sbjct: 418 GACHCKRNVNGRRCDQCREGFWNFDESNPDGCQSCTCNTLGTVNNS-GCNVYTGECICKR 476
Query: 239 NVEGAQC 245
V G C
Sbjct: 477 LVTGRDC 483
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 18/79 (22%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------------- 71
C + G C++C +N+++ + C AC+C+P+G+LN QCN
Sbjct: 1038 CLRNVKGQYCDECIENHWKIASGEGCEACDCDPVGALNEQCNPVTCDCNVYGAATQQCDR 1097
Query: 72 -EGRCQCKPGVTGDKCDRC 89
G+C C G+ G KCD+C
Sbjct: 1098 VTGQCVCNLGIGGYKCDQC 1116
>gi|195015231|ref|XP_001984162.1| GH16286 [Drosophila grimshawi]
gi|193897644|gb|EDV96510.1| GH16286 [Drosophila grimshawi]
Length = 3702
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 96/228 (42%), Gaps = 29/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C +Y C ACNCN GS + CN G C CKP G +C+
Sbjct: 609 NCLINYSGKLCNMCSAGFYNYPE---CLACNCNEHGSEGVTCNENG-CFCKPNFDGRQCE 664
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
RC + Y+F C+ C C+PAG ++ C SV G+ + GR+ E +
Sbjct: 665 RCKESFYNF--PACEDCNCDPAGVIEQFAGCGSVPVGELCKCKERVTGRICNECK----- 717
Query: 147 NFDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D Y G L+ G+C CKP G +C C
Sbjct: 718 ------PLYWNLTVSNADGCQECDCYIDGTVSGLDTCAPKSGKCHCKPHTMGRQCHECRD 771
Query: 201 NHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D GCK C C+ GS K+ CD + GQC+C V G C
Sbjct: 772 GTFDLDGSSLFGCKDCSCDVGGSWKS--ECDKISGQCKCHPRVTGRAC 817
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 116/270 (42%), Gaps = 57/270 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G +N C +D+++ NR G GG C +CQ + +G NC KC+ YY+ G
Sbjct: 337 CNCHGHTNDCMYDEDV-NRKGLSLDIHGHYDGGGVCKNCQHNTEGTNCNKCKPKYYRPRG 395
Query: 51 -----DNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
+ C+ CNC+ S C E G+C+C+ CD C +Y G C+ C
Sbjct: 396 KYWNETDVCSPCNCDFFYSTG-HCEEETGKCECRAAFQPPNCDSCSYGYY--GYPQCREC 452
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN G+ N NC++V G C + NF A + C
Sbjct: 453 ECNLNGT--NGYNCEAVNGICP-----------------CKTNFAGAL-----CKECAES 488
Query: 165 TYPLGH--------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
Y GS+N C+ G C C G +C+RC +Y+ E C C+C
Sbjct: 489 YYGFPECKACQCNKLGSINNDCDIVSGNCTCLSNWGGAQCERCKDGYYN--EPTCTYCDC 546
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G+ C GQC C++ G++C
Sbjct: 547 DHQGTESEI--CSKASGQCICREGFGGSRC 574
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 107/254 (42%), Gaps = 57/254 (22%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSEGR 74
+ +G HC +C GP CE C + ++ + GD FC C C S N+ N +G
Sbjct: 1878 SESGTEIHC-ECMRGYTGPRCEACANGFFGSPETPGD-FCKPCEC----SGNINPNEQGS 1931
Query: 75 CQCKPG--------VTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 124
C + G +G C+ C Y C+SC+C+ G+++ CD G+
Sbjct: 1932 CDTRTGECLRCLNNTSGMACNLCAPGFYGDAINLKNCQSCDCDEVGTLQ----CDPAVGK 1987
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------GSL 174
C+ + + G R RCK D Y G S
Sbjct: 1988 CKCHE-------------------NVIGERC---DRCKPDHYGFDSGTGCRACDCGAASN 2025
Query: 175 NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
+ QC+ G C CKPGVTG +CDRC V+H+ + + GC C CN S T C+ GQ
Sbjct: 2026 STQCDEHTGHCFCKPGVTGRQCDRCTVDHWRYEKDGCTPCNCNEGYSRAGT-GCNPHTGQ 2084
Query: 234 CECKDNVEGAQCRS 247
C C V G +C +
Sbjct: 2085 CVCLPGVIGDRCEA 2098
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNCN-PIGSLNL-------QCNSE 72
G C DCQ G +CE C YY + + C C C P S N + +E
Sbjct: 1824 GICKDCQHSTRGDHCEHCVAGYYGNATYGTPHDCMICACPLPYDSNNFAIGCEISESGTE 1883
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+C G TG +C+ C + E CK CEC+ + +CD+ G+C
Sbjct: 1884 IHCECMRGYTGPRCEACANGFFGSPETPGDFCKPCECSGNINPNEQGSCDTRTGECLRCL 1943
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCK 187
++ G + + + A N L+ C+ D +G LQC+ + G+C+C
Sbjct: 1944 NNTSGMA---CNLCAPGFYGDAIN----LKNCQSCDCDEVG-----TLQCDPAVGKCKCH 1991
Query: 188 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G++CDRC +HY F GC++C+C G+ N+ CD G C CK V G QC
Sbjct: 1992 ENVIGERCDRCKPDHYGFDSGTGCRACDC---GAASNSTQCDEHTGHCFCKPGVTGRQC 2047
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 86/208 (41%), Gaps = 49/208 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCN-SEGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+L QC+ + G+C+C
Sbjct: 1937 GECLRCLNNTSGMACNLCAPGFY---GDAINLKNCQSCDCDEVGTL--QCDPAVGKCKCH 1991
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G++CDRC +HY F GC++C+C G+ N+ CD G C
Sbjct: 1992 ENVIGERCDRCKPDHYGFDSGTGCRACDC---GAASNSTQCDEHTGHC------------ 2036
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS------------EGRCQ 185
F G RC D + G CN G+C
Sbjct: 2037 ----------FCKPGVTGRQCDRCTVDHWRYEKDGCTPCNCNEGYSRAGTGCNPHTGQCV 2086
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
C PGV GD+C+ C N + E GC C
Sbjct: 2087 CLPGVIGDRCEACP-NRWVLTEDGCMEC 2113
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C P V G CD+C N Y F + GC+ C CN G CD + G CEC+D
Sbjct: 1433 TTGECMCPPNVIGALCDKCAPNTYGFHQVIGCEECNCNYMGIANGKQQCDMLNGSCECRD 1492
Query: 239 NVEGAQC 245
N+ G C
Sbjct: 1493 NIVGRAC 1499
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN--LQCNSEG---RCQCKPGVTG 83
C+ + DG CE+C++++Y C CNC+P G + C S C+CK VTG
Sbjct: 654 CKPNFDGRQCERCKESFYNFPA---CEDCNCDPAGVIEQFAGCGSVPVGELCKCKERVTG 710
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
C+ C +++ + GC+ C+C G+V C G+C + + GR E
Sbjct: 711 RICNECKPLYWNLTVSNADGCQECDCYIDGTVSGLDTCAPKSGKCH-CKPHTMGRQCHEC 769
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCD 199
R FD G+ ++ + C D GGS +C+ G+C+C P VTG C +
Sbjct: 770 R---DGTFDLDGSSLFGCKDCSCDV-----GGSWKSECDKISGQCKCHPRVTGRACTQPL 821
Query: 200 VNHY 203
HY
Sbjct: 822 TTHY 825
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 80/204 (39%), Gaps = 38/204 (18%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ + G C CR YY G C C+C S + + G C C P V
Sbjct: 1392 GGQC-QCRKNVIGRQCTACRTGYY---GFPDCKVCDC---PSTAMCEATTGECMCPPNVI 1444
Query: 83 GDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G CD+C N Y F + GC+ C CN G CD + G CE
Sbjct: 1445 GALCDKCAPNTYGFHQVIGCEECNCNYMGIANGKQQCDMLNGSCE--------------- 1489
Query: 142 VQSRKNF-----DPAGNRIWDLRRCKRDT--YPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R N D + +D RC R T P G L + +G C CK V G
Sbjct: 1490 --CRDNIVGRACDGCAHGFYDFPRCSRCTCHKP---GTELEVCNKIDGSCFCKENVLGRD 1544
Query: 195 CDRCDVNHYDFGE---AGCKSCEC 215
CD+C Y+ + GC +C C
Sbjct: 1545 CDQCKDGTYNLRDDNPEGCTTCFC 1568
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 53/225 (23%)
Query: 39 EKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYD 95
E C+ + + D + +CNC+ GS + +C+ G+CQC+ V G +C C +Y
Sbjct: 1356 EFCKSAVFSLTADYNSGALSCNCDYAGSTSFECHPFGGQCQCRKNVIGRQCTACRTGYYG 1415
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
F + CK C+C +T C++ G+C N I
Sbjct: 1416 FPD--CKVCDC------PSTAMCEATTGECMCPP-----------------------NVI 1444
Query: 156 WDL-RRCKRDTYPL-----------GHGGSLN--LQCNS-EGRCQCKPGVTGDKCDRCDV 200
L +C +TY + G N QC+ G C+C+ + G CD C
Sbjct: 1445 GALCDKCAPNTYGFHQVIGCEECNCNYMGIANGKQQCDMLNGSCECRDNIVGRACDGCAH 1504
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
YDF C C C+ G+ C+ + G C CK+NV G C
Sbjct: 1505 GFYDFPR--CSRCTCHKPGTELEV--CNKIDGSCFCKENVLGRDC 1545
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+ CD C +Y G C+ CECN G+ N NC++V G C CK N
Sbjct: 423 GKCECRAAFQPPNCDSCSYGYY--GYPQCRECECNLNGT--NGYNCEAVNGICPCKTNFA 478
Query: 242 GAQCR 246
GA C+
Sbjct: 479 GALCK 483
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP-IGSLNLQCNSE-GRCQCKP 79
H GHC C+ G C++C ++++ D CT CNCN CN G+C C P
Sbjct: 2032 HTGHCF-CKPGVTGRQCDRCTVDHWRYEKDG-CTPCNCNEGYSRAGTGCNPHTGQCVCLP 2089
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSC 104
GV GD+C+ C N + E GC C
Sbjct: 2090 GVIGDRCEACP-NRWVLTEDGCMEC 2113
>gi|431839378|gb|ELK01304.1| Laminin subunit beta-4, partial [Pteropus alecto]
Length = 1235
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 23/146 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C+CNG S+RC FD +Y +G GG C DC+ + +GP+C++CR +Y+ S
Sbjct: 138 CSCNGHSDRCHFDMNVYLASGGVSGGVCEDCRHNTEGPHCDRCRPLFYRDPLKAISDPYA 197
Query: 54 CTACNCNPIGSLN-----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 99
C C C+P G+++ L+ + G+C CK V G KCD+C N+Y
Sbjct: 198 CLPCECDPDGTVSGGICVSHSDPALEWVA-GQCLCKENVEGAKCDQCKPNYYGLSATDPK 256
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQC 125
GC+ C CNP GS+ + CD G C
Sbjct: 257 GCQPCNCNPFGSLPLS-TCDVDTGHC 281
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQC--NSEGRCQCK 78
G CL C+ + +G C++C+ NYY S + C CNCNP GSL L G C CK
Sbjct: 226 AGQCL-CKENVEGAKCDQCKPNYYGLSATDPKGCQPCNCNPFGSLPLSTCDVDTGHCLCK 284
Query: 79 PGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
P G C+ C V ++ GC C+C+ G+ N C GQCE
Sbjct: 285 PFAIGPHCEDCTVGYWGLENHPHGCVPCDCDIGGAYSNM--CSPKDGQCE 332
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK V G KCD+C N+Y GC+ C CNP GS+ + CD G C CK
Sbjct: 227 GQCLCKENVEGAKCDQCKPNYYGLSATDPKGCQPCNCNPFGSLPLS-TCDVDTGHCLCKP 285
Query: 239 NVEGAQC 245
G C
Sbjct: 286 FAIGPHC 292
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 19 RTGHGGHCLDCQ-GDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GR 74
+ GH G L+ DG +C C+++YY GD C AC+CN G+ C+ + G
Sbjct: 580 KPGHFGSALNQTCRSYDGKHCSDCKEDYY---GDPLERCIACDCNREGTQRPICDGDTGM 636
Query: 75 CQCKPGVTGDKCDRCDVNH 93
C+C+ G++G +CDRC H
Sbjct: 637 CRCREGISGQQCDRCARGH 655
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 13/73 (17%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVK-------NTPNCDSVKG 232
C+ G CDRC Y D +A C CEC+P G+V + P + V G
Sbjct: 168 CRHNTEGPHCDRCRPLFYRDPLKAISDPYACLPCECDPDGTVSGGICVSHSDPALEWVAG 227
Query: 233 QCECKDNVEGAQC 245
QC CK+NVEGA+C
Sbjct: 228 QCLCKENVEGAKC 240
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 77/203 (37%), Gaps = 45/203 (22%)
Query: 52 NFCTACNCNPIGSLNL------QCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCK 102
+F TA +G LN + ++ G Q + V G +C+ C Y A C+
Sbjct: 482 DFPTAALAIVMGLLNFVIQRQDRASTAGGLQLEETVKGKQCEECSAGFYGNPRISGAPCR 541
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
C CN + + +C V G+C +++G + + CK
Sbjct: 542 PCACNNNIDITDPESCSQVTGECLKCLHNTQGP---------------------NCQLCK 580
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
P G +LN C S G C C ++Y C +C+CN G+ +
Sbjct: 581 ----PGHFGSALNQTCRS---------YDGKHCSDCKEDYYGDPLERCIACDCNREGTQR 627
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
P CD G C C++ + G QC
Sbjct: 628 --PICDGDTGMCRCREGISGQQC 648
>gi|270004880|gb|EFA01328.1| laminin A [Tribolium castaneum]
Length = 2328
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 111/262 (42%), Gaps = 37/262 (14%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC SN C +D+E ++ R GG CL+CQ + DG NC KC+ +Y+ G
Sbjct: 333 CNCFQHSNECVYDEEVDRKGLSLDIHGRYAGGGVCLNCQHNTDGINCNKCKPTFYRPFGK 392
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNCN S G+C+CK CD C + FG C+ CEC
Sbjct: 393 FENDTDACQPCNCNHFYSTGNCAEGSGQCECKKQFQPPNCDSCSFGY--FGYPNCRPCEC 450
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
G+ C++ GQC L + G Q P D + C+ +
Sbjct: 451 FLNGT--KDLQCEARNGQCPC--LYNYGG-------QFCGECAPGYYSFPDCKHCECNP- 498
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GS+ C E G C CK G +CD C +Y++ C C C+ G+ +
Sbjct: 499 ----EGSVTNACEQESGNCTCKNNFGGKRCDECQHGYYNY--PTCDYCNCDIKGTKEGI- 551
Query: 226 NCDSVKGQCECKDNVEGAQCRS 247
CD GQC CK+ G +C S
Sbjct: 552 -CDKTTGQCMCKEGYTGDRCDS 572
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C++C Y++ C C C+ GS+ + C+ EG+C+C G +CD
Sbjct: 606 CSTNYGGKTCDQCNPGYFKYPE---CLPCECDSHGSIGVSCDGEGKCECHHNFAGLRCDS 662
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV-KGQCESAQLSSRGRVHTELRVQSRKN 147
C Y+F C+ C C+PAG V C SV G+ + GR+ + R N
Sbjct: 663 CREGFYNF--PACEDCNCHPAGVVAGFAGCGSVPAGELCQCKERVEGRICNKCR-PLYWN 719
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG 206
P N CK + + G ++ C+SE G C CK V G C C Y+
Sbjct: 720 LSP--NNPQGCEECKCNISGVLGGIAV---CDSESGECVCKSLVMGRGCTECVDGTYNLQ 774
Query: 207 EA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
E GC C+C+ GSV N CD GQC C V+G C+
Sbjct: 775 EENLFGCTDCDCDVGGSVNNI--CDKATGQCLCHSRVKGRTCK 815
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ G C+ C YY G C CNC+ +GS+ C++ G+C C G
Sbjct: 557 GQCM-CKEGYTGDRCDSCLAGYY---GYPDCKPCNCSKVGSVGFSCSATGKCSCSTNYGG 612
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
CD+C+ ++ + E C CEC+ GS+ + CD +G+CE LR
Sbjct: 613 KTCDQCNPGYFKYPE--CLPCECDSHGSIGVS--CDG-EGKCECHH------NFAGLRCD 661
Query: 144 S-RKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLN--LQCNSEGRCQCKPGVTGDKCDRCD 199
S R+ F ++ C+ + +P G + CQCK V G C++C
Sbjct: 662 SCREGF-------YNFPACEDCNCHPAGVVAGFAGCGSVPAGELCQCKERVEGRICNKCR 714
Query: 200 VNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+++ GC+ C+CN +G + CDS G+C CK V G C
Sbjct: 715 PLYWNLSPNNPQGCEECKCNISGVLGGIAVCDSESGECVCKSLVMGRGC 763
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 41 CRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
C+D+ + + ++ C C+ GSL+ +C+ G +C+CKP + G KC+ C + FG
Sbjct: 1344 CKDSVFSITAGHNSGALPCGCDFAGSLSFECDKFGGQCRCKPNIIGRKCEACKTGY--FG 1401
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQC--ESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
CK C C + C+ GQC + R L +DP I
Sbjct: 1402 FPDCKPCNC------PSIAFCEPTTGQCICPPHVVGERCDQCEPLTY----GYDP----I 1447
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
CK + LG G+ N+ G C CKP V G +CD+C HY F C+ C C
Sbjct: 1448 IGCEECKCNI--LGIEGTEQCDLNN-GSCHCKPNVVGRQCDKCLAGHYAF--PYCEFCSC 1502
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ G+ CD +C CK NV G C
Sbjct: 1503 DYRGTTSEI--CDQATAECFCKKNVVGPTCE 1531
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 96/221 (43%), Gaps = 29/221 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C + G C +C YY C C CNP GS+ C E G C CK G +CD
Sbjct: 469 CLYNYGGQFCGECAPGYYSFPD---CKHCECNPEGSVTNACEQESGNCTCKNNFGGKRCD 525
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
C +Y++ C C C+ G+ + CD GQC + + R + L
Sbjct: 526 ECQHGYYNY--PTCDYCNCDIKGTKEGI--CDKTTGQCMCKEGYTGDRCDSCL------- 574
Query: 148 FDPAGNRIW-DLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 206
AG + D + C GS+ C++ G+C C G CD+C+ ++ +
Sbjct: 575 ---AGYYGYPDCKPCN-----CSKVGSVGFSCSATGKCSCSTNYGGKTCDQCNPGYFKYP 626
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
E C CEC+ GS+ + CD +G+CEC N G +C S
Sbjct: 627 E--CLPCECDSHGSIGVS--CDG-EGKCECHHNFAGLRCDS 662
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 29/198 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C Y+ GD C +C C+ +G+ + CNS G C CK
Sbjct: 1921 GECLRCLNNTYGKACALCAPGYF---GDAVNLKDCQSCICDELGTDH--CNSFTGECVCK 1975
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
P V G+KCDRC++ V N +S +G+ A + T
Sbjct: 1976 PNVIGEKCDRCEL----------PIVRSVTTSRVSVDANLESPEGRAIVAVPAFGTTQQT 2025
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCD 196
++ V S ++ G ++ C + Y LG G CN+ G+C+C GV G+KCD
Sbjct: 2026 DVFV-SLQSLVFGGKLEENVSACGCKSEYSLGFG------CNALTGQCECLQGVVGEKCD 2078
Query: 197 RCDVNHYDFGEAGCKSCE 214
+C + GC C+
Sbjct: 2079 QCPHRWVFVPDYGCHQCD 2096
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 26/192 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTACNCN-PIGSLNLQ----CNSEGR- 74
G CL+C + G +CE C Y+ +G C C C P+GS N +++G
Sbjct: 1808 GICLNCTHNTRGDHCELCEVGYHGNALAGTPMDCLICACPLPVGSNNFATACDVSADGEK 1867
Query: 75 --CQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+CK G G +C C Y E+ CK C+C+ + + +CD+V G+C
Sbjct: 1868 ISCECKEGYFGARCQSCAAGFYGRPESLGDFCKPCQCSGNINPDDPSSCDTVSGECLRCL 1927
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKP 188
++ G+ + + F A N + D + C D H CNS G C CKP
Sbjct: 1928 NNTYGKA---CALCAPGYFGDAVN-LKDCQSCICDELGTDH-------CNSFTGECVCKP 1976
Query: 189 GVTGDKCDRCDV 200
V G+KCDRC++
Sbjct: 1977 NVIGEKCDRCEL 1988
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 78/185 (42%), Gaps = 21/185 (11%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN--LQCNSEG---RCQCKPGVT 82
+C + G C+ CR+ +Y C CNC+P G + C S CQCK V
Sbjct: 650 ECHHNFAGLRCDSCREGFYNFPA---CEDCNCHPAGVVAGFAGCGSVPAGELCQCKERVE 706
Query: 83 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C++C +++ GC+ C+CN +G + CDS G+C L GR TE
Sbjct: 707 GRICNKCRPLYWNLSPNNPQGCEECKCNISGVLGGIAVCDSESGECVCKSLV-MGRGCTE 765
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
++ ++ C D GGS+N C+ + G+C C V G C
Sbjct: 766 C---VDGTYNLQEENLFGCTDCDCDV-----GGSVNNICDKATGQCLCHSRVKGRTCKEP 817
Query: 199 DVNHY 203
HY
Sbjct: 818 LETHY 822
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL-QCN-SEGRCQCKPGV 81
G C+ C G C++C Y C C CN +G QC+ + G C CKP V
Sbjct: 1421 GQCI-CPPHVVGERCDQCEPLTYGYDPIIGCEECKCNILGIEGTEQCDLNNGSCHCKPNV 1479
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +CD+C HY F C+ C C+ G+ CD +C
Sbjct: 1480 VGRQCDKCLAGHYAF--PYCEFCSCDYRGTTSEI--CDQATAEC 1519
>gi|449271698|gb|EMC81982.1| Laminin subunit beta-3, partial [Columba livia]
Length = 207
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 72/137 (52%), Gaps = 13/137 (9%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG S C FD ELY +G GG C CQ + +G NCE+C+ NY++ +
Sbjct: 42 CNCNGHSASCHFDPELYRASGGASGGVCDSCQHNTEGNNCERCKTNYFRNPRQDLTHPEA 101
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C++ GRC CK V GD+C C A GC+ C CN
Sbjct: 102 CLPCECDPDGTVPGSVCDALTGRCVCKENVQGDRCHLCKPGFAQLANANPMGCRRCTCNV 161
Query: 109 AGSVKNTPNCDSVKGQC 125
G+ +N P CD G+C
Sbjct: 162 LGTQQNVP-CDDETGRC 177
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
GRC CK V GD+C C A GC+ C CN G+ +N P CD G+C C
Sbjct: 123 GRCVCKENVQGDRCHLCKPGFAQLANANPMGCRRCTCNVLGTQQNVP-CDDETGRCACLP 181
Query: 239 NVEGAQC 245
NV G C
Sbjct: 182 NVVGNDC 188
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY-----DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G+ C+RC N++ D C CEC+P G+V + CD++ G+C CK+N
Sbjct: 72 CQHNTEGNNCERCKTNYFRNPRQDLTHPEACLPCECDPDGTVPGS-VCDALTGRCVCKEN 130
Query: 240 VEGAQCR 246
V+G +C
Sbjct: 131 VQGDRCH 137
>gi|74150060|dbj|BAE24350.1| unnamed protein product [Mus musculus]
Length = 1375
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 109/267 (40%), Gaps = 83/267 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG ++ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 350 CECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAV 409
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P+GS + +C+S G+C+CK V G +C +C + + G
Sbjct: 410 CRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASDPRG 469
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CN G+V + CDS G C
Sbjct: 470 CQRCQCNSRGTVPGSSPCDSSSGTC----------------------------------F 495
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPA 218
CKR GHG CDRC H+ GC+ C+C+
Sbjct: 496 CKRLV--TGHG-----------------------CDRCLPGHWGLSHDLLGCRPCDCDVG 530
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ P CD GQC C+ ++ G +C
Sbjct: 531 GALD--PQCDEATGQCRCRQHMIGRRC 555
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C + +GP+C C+ ++ ++ C C CN +G+ +C S
Sbjct: 1004 HTGQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLLGTDPRRCPSTDLCHCDPST 1063
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CD C N ++F GC+ C C+P S P C+ GQC
Sbjct: 1064 GQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQPCACHP--SRARGPTCNEFTGQCH-CHAG 1120
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D G QC+ S G C C+PGV
Sbjct: 1121 FGGRTCSE--CQELYWGDPG----LQCRACDCDPR-----GIDKPQCHRSTGHCSCRPGV 1169
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1170 SGVRCDQC 1177
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +C+ G +C+CKPGV G +CD C +Y FG AGC++C+C+P G
Sbjct: 779 NGALPCQCDPQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYGFGPAGCQACQCSPDG 838
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 839 ALSAL--CEGTSGQC 851
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 105/236 (44%), Gaps = 26/236 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ G C+ C YY G C AC C+P G+L+ C + G+C C+PG
Sbjct: 799 HGGQC-RCKPGVVGRRCDVCATGYY-GFGPAGCQACQCSPDGALSALCEGTSGQCPCRPG 856
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CD C + F C+ C CN CD+ G C + + G H E
Sbjct: 857 AFGLRCDHCQRGQWGF--PNCRPCVCN-----GRADECDTHTGACLGCRDYTGGE-HCE- 907
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL--QCNSEGR-----CQCKPGVTGD 193
R + + DP R+ +C+ P G G + C+ +G CQC+ G TG
Sbjct: 908 RCIAGFHGDP---RLPYGGQCRPCPCPEGPGSQRHFATSCHRDGYSQQIVCQCREGYTGL 964
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+C+ C H+ D + G C+ CEC+ + CD GQC C N EG C
Sbjct: 965 RCEACAPGHFGDPSKPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHNTEGPHC 1020
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 110/274 (40%), Gaps = 54/274 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 878 CVCNGRADEC---------DTHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPC 928
Query: 58 NCNPIGS-----LNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P G C+ +G CQC+ G TG +C+ C H+ D + G C+ C
Sbjct: 929 PC-PEGPGSQRHFATSCHRDGYSQQIVCQCREGYTGLRCEACAPGHFGDPSKPGGRCQLC 987
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQS--RKNFDPAGNR 154
EC+ + CD GQC ++ G H + QS R + G
Sbjct: 988 ECSGNIDPMDPDACDPHTGQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLLGT- 1046
Query: 155 IWDLRRCKRDTYPLGHGGSLNL-QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
D RRC S +L C+ S G+C C P V G CD C N ++F GC+
Sbjct: 1047 --DPRRCP----------STDLCHCDPSTGQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQ 1094
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S P C+ GQC C G C
Sbjct: 1095 PCACHP--SRARGPTCNEFTGQCHCHAGFGGRTC 1126
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C G G C C ++ C++C+C+P G K P C G C C+ V
Sbjct: 1113 GQCHCHAGFGGRTCSECQELYWGDPGLQCRACDCDPRGIDK--PQCHRSTGHCSCRPGVS 1170
Query: 242 GAQC 245
G +C
Sbjct: 1171 GVRC 1174
>gi|403277629|ref|XP_003930456.1| PREDICTED: laminin subunit beta-3 [Saimiri boliviensis boliviensis]
Length = 1172
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 123/269 (45%), Gaps = 44/269 (16%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ +GG C +C+ +G NCE+C+ +Y++ S
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQEA 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ + C+ G+C CK V G++CD C A GC C+C+
Sbjct: 376 CIPCECDPDGAVPGVPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCSI 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCK 162
GS ++ P CD G+C L V ++ D G W L C
Sbjct: 436 LGSRRDMP-CDEESGRC----LCLPNVVGSKC--------DQCGPYHWKLASGQGCEPCA 482
Query: 163 RDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCD-----RCDVNHYDFGEAGCKSCECN 216
D + SL+ QCN G+C C+ G G C RC Y GC++C+C+
Sbjct: 483 CDLH-----NSLSPQCNQFTGQCPCREGYGGLTCSAAAIRRCPDRTYGDAATGCRACDCD 537
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD G+C C+ + G +C
Sbjct: 538 FRGT--EGPGCDKASGRCLCRPGLTGPRC 564
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 102/243 (41%), Gaps = 38/243 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN---------PIGSLNLQCNSE 72
CQ + GPNCE+C Y + + C C+CN P Q
Sbjct: 281 CQHNTAGPNCERCAPFYNNRPWRPAEGREAHECQRCDCNGHSETCHFDPAVFAASQGAYG 340
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C C+ G C+RC ++++ G C CEC+P G+V P CD V GQC
Sbjct: 341 GVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQEACIPCECDPDGAVPGVP-CDPVTGQC 399
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
+ V E + F G + + C R D L G ++ C+ E GR
Sbjct: 400 -----VCKEHVQGERCDLCKPGF--TGLTYANPQGCHRCDCSIL--GSRRDMPCDEESGR 450
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C P V G KCD+C H+ GC+ C C+ S+ +P C+ GQC C++ G
Sbjct: 451 CLCLPNVVGSKCDQCGPYHWKLASGQGCEPCACDLHNSL--SPQCNQFTGQCPCREGYGG 508
Query: 243 AQC 245
C
Sbjct: 509 LTC 511
>gi|1244720|gb|AAC53535.1| laminin beta 2 [Mus musculus]
Length = 1799
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 109/267 (40%), Gaps = 83/267 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG ++ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 350 CECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAV 409
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P+GS + +C+S G+C+CK V G +C +C + + G
Sbjct: 410 CRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASDPRG 469
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CN G+V + CDS G C
Sbjct: 470 CQRCQCNSRGTVPGSSPCDSSSGTC----------------------------------F 495
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPA 218
CKR GHG CDRC H+ GC+ C+C+
Sbjct: 496 CKRLV--TGHG-----------------------CDRCLPGHWGLSHDLLGCRPCDCDVG 530
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ P CD GQC C+ ++ G +C
Sbjct: 531 GALD--PQCDEATGQCPCRQHMIGRRC 555
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +C+ G +C+CKPGV G +CD C +Y FG AGC++C+C+P G
Sbjct: 779 NGALPCQCDPQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYGFGPAGCQACQCSPDG 838
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 839 ALSAL--CEGTSGQC 851
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C + +GP+C C+ ++ ++ C C CN +G+ +C S
Sbjct: 1004 HTGQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLLGTDPRRCPSTDLCHCDPST 1063
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CD C N ++F GC+ C C+P S P C+ GQC
Sbjct: 1064 GQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQPCACHP--SRARGPTCNEFTGQCH-CHAG 1120
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D G QC+ S G C C+PGV
Sbjct: 1121 FGGRTCSE--CQELYWGDPG----LQCRACDCDPR-----GIDKPQCHRSTGHCSCRPGV 1169
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1170 SGVRCDQC 1177
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 97/243 (39%), Gaps = 40/243 (16%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ G C+ C YY G C AC C+P G+L+ C + G+C C+PG
Sbjct: 799 HGGQC-RCKPGVVGRRCDVCATGYY-GFGPAGCQACQCSPDGALSALCEGTSGQCPCRPG 856
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR----- 135
G +CD C + F C+ C CN CD+ G C + + G
Sbjct: 857 AFGLRCDHCQRGQWGF--PNCRPCVCN-----GRADECDTHTGACLGCRDYTGGEHCERC 909
Query: 136 ---VHTELRVQSRKNFDP------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
H + R+ P G++ C RD Y + + C C
Sbjct: 910 IAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHRDGY------------SQQIVCHC 957
Query: 187 KPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEG 242
+ G TG +C+ C + D + G C+ CEC+ + CD GQC C N EG
Sbjct: 958 RAGYTGLRCEACAPGPFGDPSKPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHNTEG 1017
Query: 243 AQC 245
C
Sbjct: 1018 PHC 1020
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 108/274 (39%), Gaps = 54/274 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 878 CVCNGRADEC---------DTHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPC 928
Query: 58 NCNPIGS-----LNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P G C+ +G C C+ G TG +C+ C + D + G C+ C
Sbjct: 929 PC-PEGPGSQRHFATSCHRDGYSQQIVCHCRAGYTGLRCEACAPGPFGDPSKPGGRCQLC 987
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQS--RKNFDPAGNR 154
EC+ + CD GQC ++ G H + QS R + G
Sbjct: 988 ECSGNIDPMDPDACDPHTGQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLLGT- 1046
Query: 155 IWDLRRCKRDTYPLGHGGSLNL-QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
D RRC S +L C+ S G+C C P V G CD C N ++F GC+
Sbjct: 1047 --DPRRCP----------STDLCHCDPSTGQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQ 1094
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S P C+ GQC C G C
Sbjct: 1095 PCACHP--SRARGPTCNEFTGQCHCHAGFGGRTC 1126
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C G G C C ++ C++C+C+P G K P C G C C+ V
Sbjct: 1113 GQCHCHAGFGGRTCSECQELYWGDPGLQCRACDCDPRGIDK--PQCHRSTGHCSCRPGVS 1170
Query: 242 GAQC 245
G +C
Sbjct: 1171 GVRC 1174
>gi|355698933|gb|AES00963.1| laminin, beta 3 [Mustela putorius furo]
Length = 956
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 123/267 (46%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ HGG C +C+ +G NCE+C+ +Y++
Sbjct: 101 CDCNGHSETCHFDPAVFAASQGTHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPIQET 160
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ G+C CK V G++CD C A GC C+C+
Sbjct: 161 CIPCECDPDGAVPGAPCDPGTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCSV 220
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGR----VHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
GS ++ P CD GQC + ++ S + +P C D
Sbjct: 221 LGSHRDMP-CDEESGQCLCLPHVVGPKCDQCAPYHWKLASGRGCEP----------CACD 269
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH---YDFGEAG--CKSCECNPA 218
+ SL+ QCN G+C C+ G G C + +G+AG C++C+C+
Sbjct: 270 PH-----NSLSPQCNQFTGQCPCREGFGGLTCSAAAIRQCPDRTYGDAGTTCRACDCDFR 324
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD V G+C C+ + G +C
Sbjct: 325 GT--EGPGCDKVSGRCLCRPGLTGPRC 349
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 105/243 (43%), Gaps = 38/243 (15%)
Query: 29 CQGDRDGPNCEKCRDNY----YQKSGD---NFCTACNCN---------PIGSLNLQCNSE 72
CQ + GPNCE+C Y ++ + D + C C+CN P Q
Sbjct: 66 CQHNTAGPNCERCAPFYNDQPWRPADDQDPHECQRCDCNGHSETCHFDPAVFAASQGTHG 125
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C C+ G C+RC ++++ G C CEC+P G+V P CD GQC
Sbjct: 126 GVCDNCRDHTEGKNCERCQLHYFRNRRPGAPIQETCIPCECDPDGAVPGAP-CDPGTGQC 184
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
+ V E + F G + + C R D L G ++ C+ E G+
Sbjct: 185 -----VCKEHVQGERCDLCKPGF--TGLTYANPQGCHRCDCSVL--GSHRDMPCDEESGQ 235
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C P V G KCD+C H+ GC+ C C+P S+ +P C+ GQC C++ G
Sbjct: 236 CLCLPHVVGPKCDQCAPYHWKLASGRGCEPCACDPHNSL--SPQCNQFTGQCPCREGFGG 293
Query: 243 AQC 245
C
Sbjct: 294 LTC 296
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 40/193 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGS-LNLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C C+C+ +GS ++ C+ E G+C C P
Sbjct: 182 GQCV-CKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCSVLGSHRDMPCDEESGQCLCLP 240
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C H+ GC+ C C+P S+ +P C+ GQC
Sbjct: 241 HVVGPKCDQCAPYHWKLASGRGCEPCACDPHNSL--SPQCNQFTGQCPC----------- 287
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------------SEGRCQ 185
R+ F +R+C TY G G+ C+ GRC
Sbjct: 288 ------REGFGGLTCSAAAIRQCPDRTY--GDAGTTCRACDCDFRGTEGPGCDKVSGRCL 339
Query: 186 CKPGVTGDKCDRC 198
C+PG+TG +CD+C
Sbjct: 340 CRPGLTGPRCDQC 352
>gi|301607123|ref|XP_002933162.1| PREDICTED: laminin subunit beta-4-like [Xenopus (Silurana)
tropicalis]
Length = 1537
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 30/223 (13%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG S +C FD +Y N GG C DCQ + G CE C+ +Y+ +
Sbjct: 326 CNCNGHSEKCHFDMAVYLANNRASGGVCEDCQDNTMGNQCELCKPYFYRNPVHDVADPYA 385
Query: 54 CTACNCNPIGSL-NLQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C+C+ GS N C S+ G C CK V G +CD+C ++ G
Sbjct: 386 CIPCDCDENGSQGNGLCQSQTNHRTGTLAGACLCKENVEGIRCDQCKSGYFGLSANDPLG 445
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C CNP GS+K + CD+V G+C+ Q ++ GR E + GN +
Sbjct: 446 CQYCNCNPFGSLKFSV-CDTVTGECQCQQFAT-GRYCEE----CIPGYWGLGNSLHSCTP 499
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
C D G +L S G+C C+P + G C++ +Y
Sbjct: 500 CNCDI----GGARSDLCSQSNGQCDCRPNMNGRHCNQPKPGYY 538
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C + G NC+KC Y+ S N C C+C S +QCN G+C CKP TG KC+
Sbjct: 1048 CLPNVIGTNCDKCASGYWGMSNGNGCQPCDCYLNNSFGIQCNQFTGQCLCKPKHTGKKCN 1107
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
C+ NH+ + C C+CN G+++ P CD V G C
Sbjct: 1108 ECEENHFGDAKYQCLPCKCNLEGTIR--PMCDKVTGSC 1143
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 110/278 (39%), Gaps = 61/278 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG S C G CLDC+G +G NCE+C++NYY
Sbjct: 857 CQCNGNSEICDLVT---------GACLDCKGFTNGTNCERCQNNYYGNPVLGQSCRPCMC 907
Query: 47 ---QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEA 99
S F +C+ +P ++E C C G TG+ C+ C Y +FG
Sbjct: 908 PDSPNSNRYFAHSCHQDPD-------SAEMVCSCLSGYTGNNCEACPPGFYGNMEEFG-G 959
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR---------GRVHTELRVQSRKNF-D 149
C C+CN V N +CD V G+C ++ G + L RK +
Sbjct: 960 RCLPCQCNNNIDVTNPESCDKVTGECLECLYNTYGANCESCLPGYFGSPLLQNCRKCICN 1019
Query: 150 PAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
P G + + + +G CN + G+C C P V G CD+C ++
Sbjct: 1020 PVGTNVENCSVYEE----IGE-----CVCNKTTGQCPCLPNVIGTNCDKCASGYWGMSNG 1070
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C+C S C+ GQC CK G +C
Sbjct: 1071 NGCQPCDCYLNNSFG--IQCNQFTGQCLCKPKHTGKKC 1106
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C+CN GSL+ C+ G C CKP V G CDRC V + F GCK C C+ G
Sbjct: 758 NGAVKCSCNIDGSLSPICSKFGGHCNCKPNVAGRCCDRCAVGSFGFDSDGCKECNCDTKG 817
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVH 137
SV +P CD V GQC RG +H
Sbjct: 818 SV--SPLCDQVTGQC-----VCRGEIH 837
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S +QCN G+C CKP TG KC+ C+ NH+ + C C+CN G+++ P CD V
Sbjct: 1083 SFGIQCNQFTGQCLCKPKHTGKKCNECEENHFGDAKYQCLPCKCNLEGTIR--PMCDKVT 1140
Query: 232 GQCECKDNVEGAQC 245
G C C+ V G C
Sbjct: 1141 GSCICRPGVTGRYC 1154
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 106/239 (44%), Gaps = 30/239 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
GGHC +C+ + G C++C + D C CNC+ GS++ C+ G+C C+
Sbjct: 778 FGGHC-NCKPNVAGRCCDRCAVGSFGFDSDG-CKECNCDTKGSVSPLCDQVTGQCVCRGE 835
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+ G +CD C +Y F C+ C+CN N+ CD V G C L +G +
Sbjct: 836 IHGRQCDSCLPGYYGF--PNCQPCQCN-----GNSEICDLVTGAC----LDCKGFTNGTN 884
Query: 141 RVQSRKNFDPAGNRIW--DLRRCKRDTYP-----LGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ + N+ GN + R C P H + ++E C C G TG+
Sbjct: 885 CERCQNNY--YGNPVLGQSCRPCMCPDSPNSNRYFAHSCHQDPD-SAEMVCSCLSGYTGN 941
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCRS 247
C+ C Y +FG C C+CN V N +CD V G+C EC N GA C S
Sbjct: 942 NCEACPPGFYGNMEEFG-GRCLPCQCNNNIDVTNPESCDKVTGECLECLYNTYGANCES 999
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 77/189 (40%), Gaps = 28/189 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN------------S 71
G CL+C + G NCE C Y+ C C CNP+G+ C+ +
Sbjct: 983 GECLECLYNTYGANCESCLPGYFGSPLLQNCRKCICNPVGTNVENCSVYEEIGECVCNKT 1042
Query: 72 EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
G+C C P V G CD+C ++ GC+ C+C S C+ GQC L
Sbjct: 1043 TGQCPCLPNVIGTNCDKCASGYWGMSNGNGCQPCDCYLNNSFG--IQCNQFTGQC----L 1096
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPG 189
+ +F G+ + CK + G++ C+ G C C+PG
Sbjct: 1097 CKPKHTGKKCNECEENHF---GDAKYQCLPCKCNL-----EGTIRPMCDKVTGSCICRPG 1148
Query: 190 VTGDKCDRC 198
VTG CD+C
Sbjct: 1149 VTGRYCDQC 1157
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 103/278 (37%), Gaps = 87/278 (31%)
Query: 1 CNCNGFSNRCF------FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY-------YQ 47
C CNG + +C D Y HG C+ CQ + DG NCEKC++ Y
Sbjct: 259 CFCNGHARQCVPLQNMQADVASYPEMVHG-RCV-CQHNTDGVNCEKCKEFYNDTPWAPAV 316
Query: 48 KSGDNFCTACNCNPIG-------SLNLQCN--SEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
DN C CNCN ++ L N S G C+ C+ G++C+ C Y
Sbjct: 317 AFNDNACRKCNCNGHSEKCHFDMAVYLANNRASGGVCEDCQDNTMGNQCELCKPYFYRNP 376
Query: 95 --DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
D + C C+C+ GS N G C+S G +
Sbjct: 377 VHDVADPYACIPCDCDENGSQGN--------GLCQSQTNHRTGTL--------------- 413
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---A 208
G C CK V G +CD+C ++
Sbjct: 414 -----------------------------AGACLCKENVEGIRCDQCKSGYFGLSANDPL 444
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GC+ C CNP GS+K + CD+V G+C+C+ G C
Sbjct: 445 GCQYCNCNPFGSLKFSV-CDTVTGECQCQQFATGRYCE 481
>gi|426254015|ref|XP_004020683.1| PREDICTED: laminin subunit alpha-1 [Ovis aries]
Length = 3080
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 101/233 (43%), Gaps = 41/233 (17%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G C++C YY C CNC+ GSL+ C EG+C C PGV G+KCD
Sbjct: 926 ECKPHVTGQRCDQCLYGYYGLDSGLGCLPCNCSA-GSLSDDCTPEGQCLCVPGVAGEKCD 984
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y + + GC C+C +NT CD G+C +RG E
Sbjct: 985 RCARGFYAYQDGGCTPCDC---AHTQNT--CDPETGECVCPP-HTRGAACKEC-ADGHWG 1037
Query: 148 FDPAGNRIWDLRRCKRDTYPLG-------HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCD 199
DP LG GS + QC+ GRC CKP G CD+C
Sbjct: 1038 HDPE----------------LGCQACNCSSVGSASQQCDVVTGRCPCKPAFGGRACDQCS 1081
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
+ F C +C+C+P G++ + + C G C CK+NV G QC
Sbjct: 1082 PGYKSF--PNCVACDCDPRGTLADACDQEQGLCSCAQETGACSCKENVAGPQC 1132
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+++ N+ GG C+ C + G NCE C D +Y+ G
Sbjct: 331 CNCHNKAKDCYYDEDVANQRRSLNIAGQFRGGGVCVGCLQNTMGVNCETCVDGFYRPHGV 390
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
DN C C+C+ +GSL+ C + G+C CK G G+KCDRC +
Sbjct: 391 SPYEDNPCRPCDCDRLGSLSSVCVKDDLHSDLHRGKWPGQCPCKEGYVGEKCDRCQFGYK 450
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
+ E C SC+CNPAGSV P
Sbjct: 451 GYPE--CVSCDCNPAGSVNEEP 470
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 107/264 (40%), Gaps = 59/264 (22%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCN 60
N FS C D G C C G CE+C D YY GD+ C CNC+
Sbjct: 804 NNFSPTCHLDD------GDEVVCDQCASGHTGDWCERCADGYYGNPTVPGDS-CVPCNCS 856
Query: 61 PIGSLNL----QCNS-EGRC-QCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSV 112
G+++L C+S G C +C G C+RC Y C++CEC+ GS+
Sbjct: 857 --GNVDLLQAGSCDSVTGECLRCLGNTDGPHCERCADGFYGDAVTAKNCRACECHGQGSL 914
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG- 171
C G CE + H G R +C Y L G
Sbjct: 915 SAV--CHPETGLCEC-------KPHV------------TGQRC---DQCLYGYYGLDSGL 950
Query: 172 ---------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
GSL+ C EG+C C PGV G+KCDRC Y + + GC C+C +
Sbjct: 951 GCLPCNCSAGSLSDDCTPEGQCLCVPGVAGEKCDRCARGFYAYQDGGCTPCDC---AHTQ 1007
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
NT CD G+C C + GA C+
Sbjct: 1008 NT--CDPETGECVCPPHTRGAACK 1029
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G+KCDRC + + E C SC+CNPAGSV P +S C CK+NVE
Sbjct: 429 GQCPCKEGYVGEKCDRCQFGYKGYPE--CVSCDCNPAGSVNEEPCSES----CLCKENVE 482
Query: 242 GAQC 245
G+ C
Sbjct: 483 GSHC 486
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 106/242 (43%), Gaps = 37/242 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSL--------NLQCNSE 72
G C CQ + G +CE+C +Y + C C C P+ + +L E
Sbjct: 759 GVCFACQHNTAGDHCERCLPGFYGLPSRGTPGDCQPCAC-PLSTASNNFSPTCHLDDGDE 817
Query: 73 GRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C QC G TGD C+RC +Y C C C+ + +CDSV G+C
Sbjct: 818 VVCDQCASGHTGDWCERCADGYYGNPTVPGDSCVPCNCSGNVDLLQAGSCDSVTGECLRC 877
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-GSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ HG GSL+ C+ E G C+C
Sbjct: 878 LGNTDGP-HCE---RCADGFYGDAVTAKNCRACE------CHGQGSLSAVCHPETGLCEC 927
Query: 187 KPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN--TPNCDSVKGQCECKDNVEGA 243
KP VTG +CD+C +Y GC C C+ AGS+ + TP +GQC C V G
Sbjct: 928 KPHVTGQRCDQCLYGYYGLDSGLGCLPCNCS-AGSLSDDCTP-----EGQCLCVPGVAGE 981
Query: 244 QC 245
+C
Sbjct: 982 KC 983
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
G C++C+ Y G C +C+CNP GS+N + SE C CK V G CDRC Y
Sbjct: 439 GEKCDRCQFGY---KGYPECVSCDCNPAGSVNEEPCSES-CLCKENVEGSHCDRCKPGFY 494
Query: 95 DFGE---AGCKSCEC 106
+ E GC C C
Sbjct: 495 NLEERNPQGCSECFC 509
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCK 78
H C C +G CE+C YY + C C+C+ GS++ C+ G+C C+
Sbjct: 1475 HDFRCDACFVGYEGQYCERCSSGYYGNPRMPGGTCQRCDCSLHGSVHGDCDRGSGQCVCR 1534
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
PG TG +C C+ H E+ C SC+ + G + N
Sbjct: 1535 PGATGLRCGECEPRHI-LVESDCVSCDDDCVGVLLN 1569
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
CNCN S+ C D E G CL+C + G C+ C YY K + C+ C
Sbjct: 1406 CNCNNHSDAC--DPE-------TGKCLNCGHNTTGDRCDTCAPGYYGKVTGSASDCSPCT 1456
Query: 59 C--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNP 108
C + S + C EG RC C G G C+RC +Y C+ C+C+
Sbjct: 1457 CPHSLPASYSPTCVLEGDHDFRCDACFVGYEGQYCERCSSGYYGNPRMPGGTCQRCDCSL 1516
Query: 109 AGSVKNTPNCDSVKGQC 125
GSV +CD GQC
Sbjct: 1517 HGSVHG--DCDRGSGQC 1531
>gi|341895736|gb|EGT51671.1| hypothetical protein CAEBREN_05144 [Caenorhabditis brenneri]
Length = 1793
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 93/229 (40%), Gaps = 64/229 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCKPG 80
G CL C +GP CE C D YY + C C CN +G+ + + G+C C
Sbjct: 1008 GECLKCLHHTEGPQCEHCVDGYYGDAKLKTCQRCVCNELGTNSTKGACDRVSGQCPCHDN 1067
Query: 81 VTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
+ G +CD+C NH++ GC++C C+P G V PN
Sbjct: 1068 IVGMQCDQCAENHFNLASGTGCEACGCDPNGVV---PN---------------------- 1102
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
H G +LQCN +G+CQCK G G KCD+C
Sbjct: 1103 ------------------------------HEGVPHLQCNIFDGQCQCKQGRGGRKCDQC 1132
Query: 199 DVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ ++ GC CECNP GS + C G CEC+ GA C
Sbjct: 1133 EDLYWGDPTTPDGCHRCECNPTGS--KSLQCHRNNGTCECQAGSGGALC 1179
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 108/236 (45%), Gaps = 56/236 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ---KSGDN--F 53
CNCN + RC FD+ +Y +G GG C DC + G NCE+C+ +Y+ ++ D+
Sbjct: 347 CNCNRHALRCHFDRAVYEASGFVSGGVCDDCMHNTQGKNCEQCKPFFYRDPRRTIDDPHV 406
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+ GS N C E G+C CK V G++CDRC +++ E+ G
Sbjct: 407 CLPCECDKAGSQNKGICEGEEDAERGLVAGKCYCKTNVDGNRCDRCKNGYWNLTESNIDG 466
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C +C CN G+ N CD G C T R+ + +N D +
Sbjct: 467 CVACTCNLLGTY-NNEGCDKYTGMC------------TCKRLVTGENCD----------Q 503
Query: 161 CKRDTYPLGH------------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C + Y L GGS + C+ S G+C+C+ G +G +C+ D + Y
Sbjct: 504 CLPEHYGLSEHVDGCKACDCDIGGSYDNSCDVSTGQCKCREGFSGRRCETADSSFY 559
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N + CNC+ GS++ C+ G +C+CKP V G +CD+C + Y FG GCK C+C+ G
Sbjct: 777 NKTSECNCDATGSVSGICSVLGGQCECKPNVVGRRCDQCAIGTYGFGPTGCKKCDCDAVG 836
Query: 111 SVKNTPNCDSVKGQC 125
S+ N +CD GQC
Sbjct: 837 SLGN--DCDKQSGQC 849
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 30/239 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP-G 80
GG C +C+ + G C++C Y G C C+C+ +GSL C+ + G+C C+ G
Sbjct: 798 GGQC-ECKPNVVGRRCDQCAIGTY-GFGPTGCKKCDCDAVGSLGNDCDKQSGQCVCREKG 855
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+ G +C++C + F E C++C+CN ++ CD G C + + G H
Sbjct: 856 IYGRQCNQCQPGFWGFPE--CRTCQCNDHANI-----CDQATGACIECRDLTTG--HYCD 906
Query: 141 RVQSRKNFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCN----SEGRCQCKPGV 190
R Q DP R+ CK T H + L+ + + C CK G
Sbjct: 907 RCQDGYYGDP---RLGVGIPCKPCPCPGGPTSGYQHADTCYLRNSGNNTQDIVCNCKSGY 963
Query: 191 TGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
G++C C NH+ E G C+ C+CN + +CD+ G+C +C + EG QC
Sbjct: 964 QGERCGECAQNHWGSPREVGGTCERCDCNGNIDMSMEGSCDAATGECLKCLHHTEGPQC 1022
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 175 NLQCNSEGRCQCKPG--------VTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTP 225
N+ + EG C G G +C+ C +Y D C+ C CN G+
Sbjct: 994 NIDMSMEGSCDAATGECLKCLHHTEGPQCEHCVDGYYGDAKLKTCQRCVCNELGTNSTKG 1053
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD V GQC C DN+ G QC
Sbjct: 1054 ACDRVSGQCPCHDNIVGMQC 1073
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 29 CQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKC 86
C+ R G C++C D Y+ + + C C CNP GS +LQC+ + G C+C+ G G C
Sbjct: 1120 CKQGRGGRKCDQCEDLYWGDPTTPDGCHRCECNPTGSKSLQCHRNNGTCECQAGSGGALC 1179
Query: 87 DRC 89
+ C
Sbjct: 1180 NEC 1182
>gi|326931919|ref|XP_003212071.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5-like
[Meleagris gallopavo]
Length = 3565
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 107/227 (47%), Gaps = 36/227 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ +G +C++C Y+ C C C+ +G+L C+S GRC C+ TG
Sbjct: 462 GQCL-CRTGFEGHSCDQCAPGYFNYP---LCQLCGCSAVGTLPGGCDSSGRCFCRAEFTG 517
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT----E 139
+C++C H+ + C +C C+ G+V N NC S GQC ++ G HT
Sbjct: 518 PRCEQCSSGHHSYPH--CYACSCDSRGAVDN--NC-SPAGQCR-CHVNFAG--HTCNQCA 569
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
L + P +C R+ GSL+ C+ E G+C C+P VTG +CD C
Sbjct: 570 LGFYGYPSCTPC--------QCSRE-------GSLHSTCDQETGQCSCRPKVTGLRCDSC 614
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F C+ CNPAG V P+ G C C+ VEG C
Sbjct: 615 VPGAYGFPH--CEVGSCNPAGLVTADPSL--APGSCACRAYVEGPAC 657
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 102/260 (39%), Gaps = 61/260 (23%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNCNG + C++D E+ ++ GG C+DCQ G NCE+C YY +S D
Sbjct: 262 CNCNGHAYDCYYDPEVDRHKASKSREDKYEGGGVCIDCQHHTTGVNCERCIPGYY-RSPD 320
Query: 52 N------FCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C CNC + + GRC CKP TG+ CD C G G C
Sbjct: 321 HPIDSPYICYRCNCKSDFTDGTCEDLTGRCYCKPNYTGEHCDACAE-----GYXGFPHCY 375
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
PA + +T + PAG I C D
Sbjct: 376 PVPAFAYNDT-----------------------------GEQVLPAGQII----NC--DC 400
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
Y G G+ + G C CKP G CD+C HY C+ C+C+ G T
Sbjct: 401 YAGGTEGNACRKDPRVGMCVCKPNFQGTHCDQCTPGHYG---PLCQPCQCSGPGQYDGT- 456
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CDS GQC C+ EG C
Sbjct: 457 -CDSETGQCLCRTGFEGHSC 475
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 94/223 (42%), Gaps = 53/223 (23%)
Query: 41 CRDNYYQKS--GDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
CRD+ S +N C C+ G+ QC G +C CK V G +C RC ++ F
Sbjct: 1322 CRDSAISLSLFYNNGAQPCQCHEAGARGSQCEPFGGQCPCKSNVIGRECSRCATGYWGF- 1380
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
C+ C+C T CD V GQC P +
Sbjct: 1381 -PNCRPCDCG-------TRLCDEVTGQC----------------------ICPPHTLKPE 1410
Query: 158 LRRCKRDTY---PL-----------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH 202
C+ T+ PL G L C+ + G+C+CKP + G +CD C +
Sbjct: 1411 CVVCEPQTFGCHPLIGCEDCNCSQPGVQELTELGCDVDSGQCKCKPNIIGRRCDLCAPGY 1470
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y + C+ C+C+P G+ + CD V GQC CK+NVEG +C
Sbjct: 1471 YHY--PSCRRCDCHPDGTEASV--CDPVTGQCHCKENVEGPRC 1509
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 98/233 (42%), Gaps = 43/233 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C + G C +C +Y G CT C C+ GSL+ C+ E G+C C+P VTG +CD
Sbjct: 556 CHVNFAGHTCNQCALGFY---GYPSCTPCQCSREGSLHSTCDQETGQCSCRPKVTGLRCD 612
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
C Y F C+ CNPAG V P+ G C R + E
Sbjct: 613 SCVPGAYGFPH--CEVGSCNPAGLVTADPSL--APGSCAC-------RAYVE-------- 653
Query: 148 FDPAGNR----IWDLR--------RCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
PA +R W+L CK +T G + Q N G+C CKP G C
Sbjct: 654 -GPACDRCKPLYWNLTPDNPYGCTSCKCETKGTISGIAECQQGN--GQCFCKPNTCGQFC 710
Query: 196 DRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C ++ A GC+ C C+ GS+ P+C+ G C C+ N G C
Sbjct: 711 SACKDGYFSMENANYFGCQGCRCDVGGSLG--PSCEERSGACRCRQNTRGPTC 761
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 51/236 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C+ C+ + G +C++C +Y C C C+ G + C+SE G+C C+ G
Sbjct: 417 GMCV-CKPNFQGTHCDQCTPGHY----GPLCQPCQCSGPGQYDGTCDSETGQCLCRTGFE 471
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C ++++ C+ C C+ G++ CDS G+C
Sbjct: 472 GHSCDQCAPGYFNY--PLCQLCGCSAVGTLPG--GCDS-SGRCFC--------------- 511
Query: 143 QSRKNFDPAGNRIWDLRRCKR-----DTYPLGHG------GSLNLQCNSEGRCQCKPGVT 191
R F RC++ +YP + G+++ C+ G+C+C
Sbjct: 512 --RAEFTGP--------RCEQCSSGHHSYPHCYACSCDSRGAVDNNCSPAGQCRCHVNFA 561
Query: 192 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
G C++C + Y G C C+C+ GS+ +T CD GQC C+ V G +C S
Sbjct: 562 GHTCNQCALGFY--GYPSCTPCQCSREGSLHST--CDQETGQCSCRPKVTGLRCDS 613
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP--------IGSLNLQCNS- 71
G CL C+ GPNCE+C YY G+ +C P L C+S
Sbjct: 1802 GSSTQCL-CKPGYAGPNCERCAPGYY---GNPLVIGSSCQPCDCSGNTDPNMLFSSCDSL 1857
Query: 72 EGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCE-S 127
G C C G +C+ C Y A C C C+P G T +C GQC
Sbjct: 1858 TGTCTGCMHHTAGARCEVCAPGFYGDAVAAKNCTKCNCSPCG----TDSCHPQTGQCFCK 1913
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
A ++ + H E + F+ RRC D G++ C+++ G+C C
Sbjct: 1914 AGVTGQHCDHCE---EGYYGFEGCSG----CRRCDCDV------GAMGSSCHAQTGQCHC 1960
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
PGV+G C +C ++ F + GC+ CEC GS CD G+C C + + G QC
Sbjct: 1961 LPGVSGLHCQQCAPGYWGFSDRGCRKCECR-GGS------CDPRTGECTCSNGLTGKQC 2012
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY---YQKSGDNFCTAC 57
C+CNG S++C G CL+CQ + +G +CE+C+D Y + G C C
Sbjct: 1733 CHCNGHSDQCL---------PGSGICLNCQHNTEGDHCEQCKDGYVGSHSADGSLQCVGC 1783
Query: 58 NCN-PIGSLNLQC-----NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
C I S N S +C CKPG G C+RC +Y G C P
Sbjct: 1784 PCPLSIASNNFAIGCVHKGSSTQCLCKPGYAGPNCERCAPGYY--GNPLVIGSSCQPCDC 1841
Query: 112 VKNT-PN-----CDSVKGQC 125
NT PN CDS+ G C
Sbjct: 1842 SGNTDPNMLFSSCDSLTGTC 1861
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G C C G CE C +Y GD CT CNC+P G+ + C+ + G+C CK
Sbjct: 1859 GTCTGCMHHTAGARCEVCAPGFY---GDAVAAKNCTKCNCSPCGTDS--CHPQTGQCFCK 1913
Query: 79 PGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
GVTG CD C+ +Y F G +GC+ C+C+ G++ ++ C + GQC L +H
Sbjct: 1914 AGVTGQHCDHCEEGYYGFEGCSGCRRCDCD-VGAMGSS--CHAQTGQCHC--LPGVSGLH 1968
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
+ F G R + R GGS + + G C C G+TG +CD
Sbjct: 1969 CQQCAPGYWGFSDRGCRKCECR-----------GGSCDPRT---GECTCSNGLTGKQCDV 2014
Query: 198 CDVNH 202
C N+
Sbjct: 2015 CMHNY 2019
>gi|156348297|ref|XP_001621795.1| hypothetical protein NEMVEDRAFT_v1g221570 [Nematostella vectensis]
gi|156208061|gb|EDO29695.1| predicted protein [Nematostella vectensis]
Length = 840
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 92/200 (46%), Gaps = 27/200 (13%)
Query: 56 ACNCNPIGSLNLQCNSE--GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSV 112
AC CN G++ + G+C C+P V G KCD C ++YDF GCK+C CN GS
Sbjct: 333 ACECNATGAVTPSVCDQCGGQCSCRPHVIGRKCDECRPDYYDFTSGLGCKACACNMTGSK 392
Query: 113 KNTPNCDSVKGQCESAQLS---SRGRVHTELRVQSRKNFDPAG-NRIWDLRRCKRDTYPL 168
+++ + D+ K +C + SR H S P G N ++
Sbjct: 393 RSSCHPDTGKCECHPSITERQCSRCLDH-YFNFTSGVGCQPCGCNELY------------ 439
Query: 169 GHGGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
S +LQC N G C CK GV G KC C Y+ GC C+C+ GS+ P C
Sbjct: 440 ----SRDLQCDNDTGVCSCKDGVGGAKCTECSDAFYNLTTEGCTGCQCDLNGSLN--PVC 493
Query: 228 DSVKGQCECKDNVEGAQCRS 247
+ + G C C+ N G C S
Sbjct: 494 NKLNGNCTCRSNAIGRLCDS 513
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
DC G +CE+C + + + CTAC C+P GS + QC++ G C C V GDKC
Sbjct: 704 DCHPLVTGLSCERCVKDAFNYTSGEGCTACGCHPQGSNDTQCDAVFGNCTCNTNVKGDKC 763
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
D+C N YD G++ C +C C+ + NT CD V GQC+
Sbjct: 764 DQCMPNFYDVGKS-CIACNCSENYTQPNT-TCDVVTGQCK 801
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 59/111 (53%), Gaps = 14/111 (12%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNS-EGRCQ 76
C +C G CE+C+D+YY D C ACNC GS + +CN+ G+C
Sbjct: 645 CTNCSEGHAGRQCERCQDSYYGTPTDPVNGQCRKCNCNACNCTDRGSKHGECNNVTGQCD 704
Query: 77 CKPGVTGDKCDRC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
C P VTG C+RC D +Y GE GC +C C+P GS N CD+V G C
Sbjct: 705 CHPLVTGLSCERCVKDAFNYTSGE-GCTACGCHPQGS--NDTQCDAVFGNC 752
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDF 96
C +C D+Y+ + C C CN + S +LQC N G C CK GV G KC C Y+
Sbjct: 414 CSRCLDHYFNFTSGVGCQPCGCNELYSRDLQCDNDTGVCSCKDGVGGAKCTECSDAFYNL 473
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
GC C+C+ GS+ P C+ + G C
Sbjct: 474 TTEGCTGCQCDLNGSLN--PVCNKLNGNC 500
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 179 NSEGRCQCKPGVTGDKCDRC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
N G+C C P VTG C+RC D +Y GE GC +C C+P GS N CD+V G C C
Sbjct: 698 NVTGQCDCHPLVTGLSCERCVKDAFNYTSGE-GCTACGCHPQGS--NDTQCDAVFGNCTC 754
Query: 237 KDNVEGAQC 245
NV+G +C
Sbjct: 755 NTNVKGDKC 763
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 73/179 (40%), Gaps = 43/179 (24%)
Query: 77 CKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTP---NCDSVKGQCESAQ 129
C G G +C+RC ++Y D C+ C CN C++V GQC+
Sbjct: 648 CSEGHAGRQCERCQDSYYGTPTDPVNGQCRKCNCNACNCTDRGSKHGECNNVTGQCDCHP 707
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQC 178
L + RC +D + G GS + QC
Sbjct: 708 LVTG----------------------LSCERCVKDAFNYTSGEGCTACGCHPQGSNDTQC 745
Query: 179 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
++ G C C V GDKCD+C N YD G++ C +C C+ + NT CD V GQC+C
Sbjct: 746 DAVFGNCTCNTNVKGDKCDQCMPNFYDVGKS-CIACNCSENYTQPNT-TCDVVTGQCKC 802
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 79/194 (40%), Gaps = 52/194 (26%)
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQ 124
N + E CQ G GD Y G+A CECN G+V TP+ CD GQ
Sbjct: 308 NWTGHKEIGCQVLAGFYGDL--------YQKGQA----CECNATGAV--TPSVCDQCGGQ 353
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GS 173
C R H V RK C+ D Y G GS
Sbjct: 354 CSC-------RPH----VIGRK-----------CDECRPDYYDFTSGLGCKACACNMTGS 391
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVK 231
C+ + G+C+C P +T +C RC ++++F GC+ C CN S CD+
Sbjct: 392 KRSSCHPDTGKCECHPSITERQCSRCLDHYFNFTSGVGCQPCGCNELYS--RDLQCDNDT 449
Query: 232 GQCECKDNVEGAQC 245
G C CKD V GA+C
Sbjct: 450 GVCSCKDGVGGAKC 463
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCT 55
C CN S C E ++ G+G CL+C + CE+C+ +Y+ + N C
Sbjct: 37 CGCNNHSASC----EYHSSKGYG-VCLNCTDNTMXDKCEQCKPAFYRNPDTPLNHTNTCL 91
Query: 56 ACNCNPIGSLNLQ---CNSEGRCQCKPGVTGDKCDRC 89
C C+ G++N +G+C CK VTG CD C
Sbjct: 92 ECGCHGAGTVNASDVCRKLDGQCPCKQAVTGRTCDTC 128
>gi|170571450|ref|XP_001891733.1| Laminin related. see also lmb- protein 1 [Brugia malayi]
gi|158603600|gb|EDP39466.1| Laminin related. see also lmb- protein 1, putative [Brugia malayi]
Length = 1789
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 112/266 (42%), Gaps = 68/266 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG + RC FD+ +Y +G GG C +C + G NCE+C+ +Y+ +
Sbjct: 343 CECNGHAARCHFDRAVYQASGFVSGGVCDECLHNTQGKNCEQCKPYFYRNPDRPITDPYV 402
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C C C+ GSLN EG + G+ KC C+ N G
Sbjct: 403 CLPCKCDKTGSLN-DGICEGEEDSERGLVAGKC----------------YCKSNVEGP-- 443
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIWDL--------RRCKR 163
Q+S+ G + NF D N W L R C
Sbjct: 444 --------------WQVSNFGAI-------PDSNFRCDHCKNGFWKLTADDPNGCRPCSC 482
Query: 164 DTYPLGHGGSLNLQ-CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAG 219
D GS N + CN + G C CK VTGD CD+C HY + GCK C+C+ G
Sbjct: 483 DLL-----GSFNNEGCNKQTGECLCKQLVTGDACDKCLPEHYGLSDDLYGCKPCDCDLGG 537
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
SV N +CD + GQC+C+ N G +C
Sbjct: 538 SVDN--HCDVITGQCKCRRNFSGRRC 561
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 118/251 (47%), Gaps = 47/251 (18%)
Query: 20 TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCK 78
+G GG C DC+ + G C++C Y G + CT+C C+ +GSLN CN + G+C C+
Sbjct: 803 SGKGGQC-DCKPNVIGRRCDRCAVGTY-GFGPSGCTSCECDSVGSLNNNCNRQSGQCSCR 860
Query: 79 P-GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR-- 135
G+TG +C++C + F + C+ C+CN S+ CD G C + G
Sbjct: 861 ERGITGRQCNQCQPGFWSFPD--CRVCQCNDHASI-----CDQKTGACIDCLDLTDGYYC 913
Query: 136 ------VHTELRVQSRKNFDP--------AGNRIWD---LRRCKRDTYPLGHGGSLNLQC 178
+ + R+ + P +G + D LR P H + ++ C
Sbjct: 914 DHCKDGYYGDPRLGINLSCKPCPCPGGLDSGFQHADTCYLR-------PSEHSEAPDVVC 966
Query: 179 NSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC- 234
N C+ G TG++C C VNH+ + E G C+ CECN V +CD V G C
Sbjct: 967 N------CRIGYTGERCSSCAVNHWGNPNELGGTCEPCECNGNIDVNVEGSCDPVTGDCI 1020
Query: 235 ECKDNVEGAQC 245
+C N EGAQC
Sbjct: 1021 KCLHNTEGAQC 1031
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 108/259 (41%), Gaps = 56/259 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTACNCNPIG-----------SLNLQC 69
G C+DC DG C+ C+D YY + G N C C C P G L
Sbjct: 899 GACIDCLDLTDGYYCDHCKDGYYGDPRLGINLSCKPCPC-PGGLDSGFQHADTCYLRPSE 957
Query: 70 NSEG---RCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKG 123
+SE C C+ G TG++C C VNH+ + E G C+ CECN V +CD V G
Sbjct: 958 HSEAPDVVCNCRIGYTGERCSSCAVNHWGNPNELGGTCEPCECNGNIDVNVEGSCDPVTG 1017
Query: 124 QCESAQLSSRGR--------VHTELRVQSRKN---FDPAGNRIWDLRRCKRDTYPLGHGG 172
C ++ G + + +++S + D NR C R T
Sbjct: 1018 DCIKCLHNTEGAQCEDCMEGYYGDAKIRSCQKCVCNDLGTNRTAGA--CDRVT------- 1068
Query: 173 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV-----KNTPN 226
G+C C P V G CD C V+H+D GC+ C+C+P G + +
Sbjct: 1069 ---------GQCPCLPNVIGIACDLCAVHHFDLASGKGCEPCKCDPTGVILSDDGMSQLQ 1119
Query: 227 CDSVKGQCECKDNVEGAQC 245
C+ + G+C CK G C
Sbjct: 1120 CNELDGRCYCKPGRGGRTC 1138
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+ GS + C+ +G +C CKP V G +CDRC V Y FG +GC SCEC+ G
Sbjct: 785 NRSLECECDATGSRSGICSGKGGQCDCKPNVIGRRCDRCAVGTYGFGPSGCTSCECDSVG 844
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGR 135
S+ N NC+ GQC + GR
Sbjct: 845 SLNN--NCNRQSGQCSCRERGITGR 867
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 92/231 (39%), Gaps = 23/231 (9%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEGRC--------QC 77
+C+ G C C N++ + C C CN N+ N EG C +C
Sbjct: 967 NCRIGYTGERCSSCAVNHWGNPNELGGTCEPCECNG----NIDVNVEGSCDPVTGDCIKC 1022
Query: 78 KPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
G +C+ C +Y D C+ C CN G+ + CD V GQC +
Sbjct: 1023 LHNTEGAQCEDCMEGYYGDAKIRSCQKCVCNDLGTNRTAGACDRVTGQCPCLP----NVI 1078
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
+ + +FD A + + +C L G LQCN +GRC CKPG G C
Sbjct: 1079 GIACDLCAVHHFDLASGKGCEPCKCDPTGVILSDDGMSQLQCNELDGRCYCKPGRGGRTC 1138
Query: 196 DRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ H+ D C+ CEC+ GS T CD G C C G C
Sbjct: 1139 SDCEDYHWGDPATGECRKCECDRIGSA--TQQCDRNNGSCICLPGSGGPLC 1187
>gi|45383784|ref|NP_989497.1| laminin subunit beta-2 precursor [Gallus gallus]
gi|2708707|gb|AAB92586.1| laminin beta 2-like chain [Gallus gallus]
Length = 1792
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 52/240 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S RC FD ++ TG+ G C CQ + G +C C+ YY+ +
Sbjct: 347 CDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRHCHLCKPFYYKDPSKDLRDPTV 406
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C ACNC P G+++ + G+C+CK V G +CDRC + A G
Sbjct: 407 CRACNCYPEGTVDGGLCDGADDPERGLIAGQCRCKEHVQGPRCDRCKAGFFGLSAANPQG 466
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
C+ C C+P G+V + CD V G C R+ + ++ D W L
Sbjct: 467 CQRCRCDPRGTVADGSQCDPVSGDCLCK------------RLVTGRSCDQCLPEHWALSH 514
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD-------RCDVNHYDF 205
R C+ D GG+ + QC E G+C+C+ + G +C+ R +++HY +
Sbjct: 515 DLPGCRPCECDV-----GGAHDNQCAMETGQCRCRSHIVGRQCEQVEPGFYRINLDHYTY 569
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--------GRC 75
G CL C + GP+C +C+ YY + + C C+CN +G+ C + G+C
Sbjct: 1000 GQCLRCLYNTAGPHCAECQPGYYGDAMRHSCRRCSCNTLGTDPNTCGPQQCQCDQRSGQC 1059
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N ++ G GC+ C C+P S+ +P C+ GQC S + G
Sbjct: 1060 HCLPHVEGQSCDRCSPNFWNLGSGQGCEPCACHPQHSL--SPACNQFTGQC-SCRPGFGG 1116
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGD 193
R T Q + DP R C D G + QC+ G C C+PG++G
Sbjct: 1117 R--TCANCQEQHWGDPR----LQCRACDCDPR-----GIASTQCHHGSGHCDCRPGISGV 1165
Query: 194 KCDRC 198
+CD+C
Sbjct: 1166 RCDQC 1170
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 109/266 (40%), Gaps = 39/266 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG + C G CL C+ DG C++C ++ C C
Sbjct: 872 CQCNGHAEEC---------DPQTGSCLRCRDHTDGERCQRCAAGHFGNPALGSGQHCRPC 922
Query: 58 NC--NPIGSLNL--QCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCE 105
C P G + C +GR C C PG TG +CD C +Y D + G C+ C+
Sbjct: 923 PCPDGPGGPRHFAASCYQDGRSRQVVCHCSPGYTGPRCDECAPGYYGDPLQPGGHCRPCQ 982
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ + CD GQC ++ G E Q D + RRC +T
Sbjct: 983 CHNNIDTTDPEACDRRTGQCLRCLYNTAGPHCAE--CQPGYYGDAMRH---SCRRCSCNT 1037
Query: 166 YPLGHG----GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAG 219
LG G QC+ G+C C P V G CDRC N ++ G GC+ C C+P
Sbjct: 1038 --LGTDPNTCGPQQCQCDQRSGQCHCLPHVEGQSCDRCSPNFWNLGSGQGCEPCACHPQH 1095
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
S+ +P C+ GQC C+ G C
Sbjct: 1096 SL--SPACNQFTGQCSCRPGFGGRTC 1119
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 101/236 (42%), Gaps = 28/236 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G C C C+ GSL+ C++ G+C C+ G
Sbjct: 794 GGQC-RCKPNVVGRRCHRCSPGTF-GFGPRRCDPCQCSGEGSLSAVCDTVTGQCPCRQGA 851
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CDRC H+ F C+ C+CN + CD G C R R HT+
Sbjct: 852 HGSRCDRCQPGHWGF--PTCRPCQCN-----GHAEECDPQTGSC------LRCRDHTDGE 898
Query: 142 VQSRKNFDPAGN-RIWDLRRCKRDTYPLGHGGSLNL--QCNSEGR-----CQCKPGVTGD 193
R GN + + C+ P G GG + C +GR C C PG TG
Sbjct: 899 RCQRCAAGHFGNPALGSGQHCRPCPCPDGPGGPRHFAASCYQDGRSRQVVCHCSPGYTGP 958
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+CD C +Y D + G C+ C+C+ + CD GQC C N G C
Sbjct: 959 RCDECAPGYYGDPLQPGGHCRPCQCHNNIDTTDPEACDRRTGQCLRCLYNTAGPHC 1014
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P E C + S N C C+P GSL+ +C +G +C+CKP V G +C RC
Sbjct: 755 PVAEPCSRLLHSLSAILHNGALPCLCDPQGSLSAECQPQGGQCRCKPNVVGRRCHRCSPG 814
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG C C+C+ GS+ CD+V GQC
Sbjct: 815 TFGFGPRRCDPCQCSGEGSLSAV--CDTVTGQC 845
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G +CDRC + A GC+ C C+P G+V + CD V G C CK
Sbjct: 436 GQCRCKEHVQGPRCDRCKAGFFGLSAANPQGCQRCRCDPRGTVADGSQCDPVSGDCLCKR 495
Query: 239 NVEGAQC 245
V G C
Sbjct: 496 LVTGRSC 502
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 91/238 (38%), Gaps = 54/238 (22%)
Query: 35 GPNCEKCRDNYYQKSGDNF-----CTACNC-NPIGSLNLQC--NSEGRC-QCKPGVTGDK 85
GP C++C YY GD C C C N I + + + G+C +C G
Sbjct: 957 GPRCDECAPGYY---GDPLQPGGHCRPCQCHNNIDTTDPEACDRRTGQCLRCLYNTAGPH 1013
Query: 86 CDRCDVNHY-DFGEAGCKSCECNPAGSVKNT--PN---CDSVKGQCESAQLSSRGRVHTE 139
C C +Y D C+ C CN G+ NT P CD GQC H
Sbjct: 1014 CAECQPGYYGDAMRHSCRRCSCNTLGTDPNTCGPQQCQCDQRSGQC-----------HCL 1062
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCK 187
V+ + RC + + LG G SL+ CN G+C C+
Sbjct: 1063 PHVEGQ-----------SCDRCSPNFWNLGSGQGCEPCACHPQHSLSPACNQFTGQCSCR 1111
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
PG G C C H+ C++C+C+P G C G C+C+ + G +C
Sbjct: 1112 PGFGGRTCANCQEQHWGDPRLQCRACDCDPRGIAST--QCHHGSGHCDCRPGISGVRC 1167
>gi|355708158|gb|AES03181.1| netrin 1 [Mustela putorius furo]
Length = 168
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 14 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 73
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 74 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 132
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 133 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCRKDY 168
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C +Y D G+ CK+C+C+P G+ T C+ GQC CKD
Sbjct: 44 CRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGKT--CNQTTGQCPCKDG 101
Query: 240 VEGAQC 245
V G C
Sbjct: 102 VTGITC 107
>gi|296230654|ref|XP_002760803.1| PREDICTED: laminin subunit beta-3 [Callithrix jacchus]
Length = 1172
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 124/269 (46%), Gaps = 44/269 (16%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C+CNG S C FD ++ ++ +GG C +C+ + +G NCE+C+ +Y++ S
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDNTEGRNCERCQLHYFRNRRPGVSIQEA 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ + C+ G+C CK V G++CD C A GC C+C+
Sbjct: 376 CIPCECDPDGAVPGVPCDPVTGQCMCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCSI 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCK 162
GS ++ P CD G+C L V ++ D G W L C
Sbjct: 436 LGSRRDMP-CDEESGRC----LCLPNVVGSKC--------DQCGPYHWKLASGQGCEPCA 482
Query: 163 RDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH-----YDFGEAGCKSCECN 216
D++ SL+ QCN G+C C+ G G C + Y GC++C+C+
Sbjct: 483 CDSH-----NSLSPQCNQFTGQCPCREGYGGLTCSAAAIRQCPDRTYGDAATGCRACDCD 537
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD G+C C+ + G +C
Sbjct: 538 FRGT--EGPGCDKASGRCLCRPGLTGPRC 564
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 102/243 (41%), Gaps = 38/243 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN---------PIGSLNLQCNSE 72
CQ + GPNCE+C Y + + C C+CN P Q
Sbjct: 281 CQHNTAGPNCERCAPFYNNRPWRPAEGQEAHECQRCDCNGHSETCHFDPAVFAASQGAYG 340
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C C+ G C+RC ++++ G C CEC+P G+V P CD V GQC
Sbjct: 341 GVCDNCRDNTEGRNCERCQLHYFRNRRPGVSIQEACIPCECDPDGAVPGVP-CDPVTGQC 399
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
+ V E + F G + + C R D L G ++ C+ E GR
Sbjct: 400 -----MCKEHVQGERCDLCKPGF--TGLTYANPQGCHRCDCSIL--GSRRDMPCDEESGR 450
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C P V G KCD+C H+ GC+ C C+ S+ +P C+ GQC C++ G
Sbjct: 451 CLCLPNVVGSKCDQCGPYHWKLASGQGCEPCACDSHNSL--SPQCNQFTGQCPCREGYGG 508
Query: 243 AQC 245
C
Sbjct: 509 LTC 511
>gi|332021489|gb|EGI61854.1| Laminin subunit alpha-1 [Acromyrmex echinatior]
Length = 2357
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 104/230 (45%), Gaps = 41/230 (17%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCD 87
C+ G C +C+ Y+ + CT C C+ +GS N C N G C CKPGV G +CD
Sbjct: 186 CKPQVIGRQCNECKTGYWGLTSGTGCTPCGCDSMGSHNTSCSNDTGECYCKPGVGGSRCD 245
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLS-----SRGRVHTELR 141
C +Y F GC+ C+ C G V CD G+C +L+ R R
Sbjct: 246 SCLSGYYGFSLNGCQLCDSCVRPGHV-----CDPDTGRCVCPRLTYGEHCDRCR------ 294
Query: 142 VQSRKNFDPAGNRIWDLRR---CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
P WDL C+ LG GS QC+ +G+C C+ G G +C+RC
Sbjct: 295 --------PGA---WDLVPRVGCRLCACTLGATGS---QCDHQGQCPCRIGYDGLRCERC 340
Query: 199 DVNHYDFGEAGCKSCECNPAGSVK---NTPNCDSVKGQCECKDNVEGAQC 245
+Y G C+ C CN AG+ CD KGQC CK+ V G QC
Sbjct: 341 AKGYY--GYPRCRPCGCNLAGTTHCHDGVCECDD-KGQCPCKELVVGRQC 387
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 19/134 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S C D+E G+CL+C+ + G +C C D++Y C C C
Sbjct: 670 CQCNGRSEVC--DRE-------TGYCLNCKENTFGAHCNVCTDSFYGHPEIGGCKPCPCP 720
Query: 61 PI-----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSV 112
+ + ++ N+E C CKPG G KC+RC +Y D + C C CN AGS+
Sbjct: 721 QVDKRFSSTCVVRANNEPICHCKPGYVGRKCERCAHGYYGFPDLPDGKCVPCNCNLAGSL 780
Query: 113 KNTPNCDSVKGQCE 126
+ CD GQC+
Sbjct: 781 SD--GCDGETGQCK 792
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
++ N+E C CKPG G KC+RC +Y D + C C CN AGS+ + CD G
Sbjct: 732 VRANNEPICHCKPGYVGRKCERCAHGYYGFPDLPDGKCVPCNCNLAGSLSD--GCDGETG 789
Query: 233 QCECKDNVEGAQC 245
QC+CK G C
Sbjct: 790 QCKCKIGSTGRDC 802
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ G CE+C YY D C CNCN GSL+ C+ E G+C+CK G TG
Sbjct: 742 CKPGYVGRKCERCAHGYYGFPDLPDGKCVPCNCNLAGSLSDGCDGETGQCKCKIGSTGRD 801
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C +C + + C SC N G + +T
Sbjct: 802 CSQCTAYRHVYINNVCTSCNDNCTGILLDT 831
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+CQCKP V G +C+ C ++ GC C C+ GS + +C + G+C CK V
Sbjct: 182 GQCQCKPQVIGRQCNECKTGYWGLTSGTGCTPCGCDSMGS--HNTSCSNDTGECYCKPGV 239
Query: 241 EGAQCRS 247
G++C S
Sbjct: 240 GGSRCDS 246
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 55 TACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGS 111
T C CN +GS + C+ G+CQCKP V G +C+ C ++ GC C C+ GS
Sbjct: 163 TGCGCNNLGSTSSACDIVSGQCQCKPQVIGRQCNECKTGYWGLTSGTGCTPCGCDSMGS 221
>gi|291244980|ref|XP_002742373.1| PREDICTED: laminin, beta 2-like [Saccoglossus kowalevskii]
Length = 1752
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 105/224 (46%), Gaps = 32/224 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
CNCN ++RC FD +Y +TG GG C +CQ + G NCE+CR +Y N
Sbjct: 316 CNCNNHASRCHFDPAVYEQTGQISGGVCDNCQHNTLGRNCEQCRPFFYMDPSKDIRDPNV 375
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C CNC+P G++N +C S GRC CK V GD+CD C +++ G
Sbjct: 376 CVPCNCDPSGAVNGGECESREDRENGLVAGRCICKRFVEGDRCDVCRDGYWNLEYNNPEG 435
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C C G+V N C GQC +L + + L + DP G +
Sbjct: 436 CQPCSCALQGTVGNQ-GCHKRTGQCVCKRLVTGRDCNECLDGYWGLSDDPDG-----CKP 489
Query: 161 CKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C D GGS + C S+G+C+CK + G +CD + +
Sbjct: 490 CDCDI-----GGSYDNLCEKSDGQCRCKRNIIGRRCDMAEPGFF 528
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 87/198 (43%), Gaps = 46/198 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + +G CE C+ +Y + + C C CN +G+ C++ G
Sbjct: 967 GECLRCLYNTEGTYCENCKPGFYGDALNKDCKKCVCNILGTDRSVCDNMNNCGICDSNTG 1026
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
+C C P V G CDRC +++ GC+ C C GSV + C+ GQC
Sbjct: 1027 QCPCLPNVEGRNCDRCTDDYWKLASGTGCELCNCCSYGSV--SSQCNEFDGQC------- 1077
Query: 133 RGRVHTELRVQSRKNF----------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE- 181
Q R F D G+ + + + C D GS +LQC+ +
Sbjct: 1078 ----------QCRPGFGGRQCCDCEADFWGDPLVECKACNCDP-----DGSESLQCDRDT 1122
Query: 182 GRCQCKPGVTGDKCDRCD 199
G C CK GVTGDKCDRCD
Sbjct: 1123 GVCLCKEGVTGDKCDRCD 1140
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P E C D + S + CNC+ GS++ C + G +C+CK V G +CDRC
Sbjct: 722 PMPEICEDLIFSMSASMYDGAVPCNCDQTGSVSSVCGAIGGQCECKSNVIGRRCDRCSPG 781
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y FG GC+ C+CN GS + CD GQC
Sbjct: 782 TYGFGPQGCQLCDCNQIGS--RSLLCDVNSGQC 812
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 108/273 (39%), Gaps = 51/273 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G C DC+ + G C+ C +Y
Sbjct: 839 CQCNGHADTC---------DSRTGTCEDCRDNTAGQFCQICALGFYGDPREGSGQVCQPC 889
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGE 98
SG F +C +P + C+CK G TG +CD+CD N +
Sbjct: 890 MCPGGAGSGFQFADSCYLDPRSQTVI-------CECKEGYTGIRCDQCDNNFFGNPLIPG 942
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
GC++C CN NCD+ G+C ++ G + + A N+ D
Sbjct: 943 GGCQNCSCNGNIDPSVPGNCDARTGECLRCLYNTEGTYCENCKPGF---YGDALNK--DC 997
Query: 159 RRCKRDTYPLGHGGSLNLQ----CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKS 212
++C + N+ C+S G+C C P V G CDRC +++ GC+
Sbjct: 998 KKCVCNILGTDRSVCDNMNNCGICDSNTGQCPCLPNVEGRNCDRCTDDYWKLASGTGCEL 1057
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C GSV + C+ GQC+C+ G QC
Sbjct: 1058 CNCCSYGSV--SSQCNEFDGQCQCRPGFGGRQC 1088
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 15/81 (18%)
Query: 12 FDKELYNRTGHGG-HCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN 70
FD + R G GG C DC+ D G +C+ ACNC+P GS +LQC+
Sbjct: 1073 FDGQCQCRPGFGGRQCCDCEADFWGDPLVECK-------------ACNCDPDGSESLQCD 1119
Query: 71 SE-GRCQCKPGVTGDKCDRCD 90
+ G C CK GVTGDKCDRCD
Sbjct: 1120 RDTGVCLCKEGVTGDKCDRCD 1140
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 77/188 (40%), Gaps = 54/188 (28%)
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS-------VKNTPNCDSVKGQCESAQ 129
CKPG GD ++ CK C CN G+ + N CDS GQC
Sbjct: 984 CKPGFYGDALNK-----------DCKKCVCNILGTDRSVCDNMNNCGICDSNTGQCPCLP 1032
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQC 178
V+ R + RC D + L G GS++ QC
Sbjct: 1033 -----------NVEGR-----------NCDRCTDDYWKLASGTGCELCNCCSYGSVSSQC 1070
Query: 179 NS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
N +G+CQC+PG G +C C+ + + CK+C C+P GS + CD G C CK
Sbjct: 1071 NEFDGQCQCRPGFGGRQCCDCEADFWGDPLVECKACNCDPDGS--ESLQCDRDTGVCLCK 1128
Query: 238 DNVEGAQC 245
+ V G +C
Sbjct: 1129 EGVTGDKC 1136
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 110/291 (37%), Gaps = 69/291 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSG---DNF 53
C C G ++RC + + + +G DC + G NCE+C D Y ++ + N
Sbjct: 253 CQCYGHASRCIPLEGMSHESGMVYGNCDCTHNTKGLNCEQCEDFYNDLPWRPAAGGETNA 312
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGV-------TGDKCDRCDVNHY------------ 94
C CNCN N RC P V +G CD C N
Sbjct: 313 CKRCNCN---------NHASRCHFDPAVYEQTGQISGGVCDNCQHNTLGRNCEQCRPFFY 363
Query: 95 -----DFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE---LRVQSR 145
D + C C C+P+G+V G+CES + G V R
Sbjct: 364 MDPSKDIRDPNVCVPCNCDPSGAVNG--------GECESREDRENGLVAGRCICKRFVEG 415
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLG--------HGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
D + W+L P G G N C+ G+C CK VTG C+
Sbjct: 416 DRCDVCRDGYWNLEY----NNPEGCQPCSCALQGTVGNQGCHKRTGQCVCKRLVTGRDCN 471
Query: 197 RCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C ++ + GCK C+C+ GS N C+ GQC CK N+ G +C
Sbjct: 472 ECLDGYWGLSDDPDGCKPCDCDIGGSYDNL--CEKSDGQCRCKRNIIGRRC 520
>gi|47220593|emb|CAG05619.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1233
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 111/273 (40%), Gaps = 50/273 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG S C H G C +C+ GPNC++C + YY
Sbjct: 910 CQCNGLSEEC---------DPHTGECWNCRQHAQGPNCDRCEEGYYGDPVSRQPCEPCLC 960
Query: 47 ---QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAG 100
Q SG F T+C+ P SL L C C+ G G CDRC +Y A
Sbjct: 961 PDIQGSGRFFATSCHHEP-QSLGLT------CACREGHEGPSCDRCSPGYYGNLALPGAS 1013
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR-----I 155
C+ C CN + + CD V G+C ++ G + + N A R
Sbjct: 1014 CELCLCNNNIDLDDRNACDGVTGECLRCLHNTMGPQCQDCKPGYYGN---ALERDCKECS 1070
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCE 214
D R K PLG + S G+C C+ GV G CD C+ +++ G +GC+ C
Sbjct: 1071 CDRRGTKVTQCPLGSPCFCD---PSTGQCPCRKGVVGVLCDECEDGYWNMDGASGCQPCS 1127
Query: 215 CNPAGSVKNTPN--CDSVKGQCECKDNVEGAQC 245
C+PA S+ C V GQC C G QC
Sbjct: 1128 CDPANSLSYVWVSCCVQVTGQCPCLTEFGGQQC 1160
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 96/240 (40%), Gaps = 52/240 (21%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
AC CN +G+L C+ G C CKP V G CD C + FG GC++C+C+P G+
Sbjct: 815 ACRCNAVGALGPSCSKLGGVCDCKPNVIGRCCDACAPMTFGFGPDGCEACDCDPRGATSE 874
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQS--------------RKNFDPAGNRIWDLR- 159
CD V+GQC S +L GR R + DP W+ R
Sbjct: 875 L--CDQVRGQC-SCRLEVTGRRCDHCRTGYWGFPLCRPCQCNGLSEECDPHTGECWNCRQ 931
Query: 160 --------RCKRDTY--PL--------------GHGGSLNLQCNSEGR-----CQCKPGV 190
RC+ Y P+ G G C+ E + C C+ G
Sbjct: 932 HAQGPNCDRCEEGYYGDPVSRQPCEPCLCPDIQGSGRFFATSCHHEPQSLGLTCACREGH 991
Query: 191 TGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
G CDRC +Y A C+ C CN + + CD V G+C C N G QC+
Sbjct: 992 EGPSCDRCSPGYYGNLALPGASCELCLCNNNIDLDDRNACDGVTGECLRCLHNTMGPQCQ 1051
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 87/222 (39%), Gaps = 56/222 (25%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NS 71
G G CL C + GP C+ C+ YY + + C C+C+ G+ QC S
Sbjct: 1033 GVTGECLRCLHNTMGPQCQDCKPGYYGNALERDCKECSCDRRGTKVTQCPLGSPCFCDPS 1092
Query: 72 EGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPN--CDSVKGQCESA 128
G+C C+ GV G CD C+ +++ G +GC+ C C+PA S+ C V GQC
Sbjct: 1093 TGQCPCRKGVVGVLCDECEDGYWNMDGASGCQPCSCDPANSLSYVWVSCCVQVTGQCPCL 1152
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-------- 180
TE Q D G H G+ +LQC S
Sbjct: 1153 ---------TEFGGQ---QCDECGEN---------------HFGNPDLQCVSCDCNLDGT 1185
Query: 181 --------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G C C+ GVTG CD C H D C+ C
Sbjct: 1186 ERPSCDPETGECMCRKGVTGIFCDECAPGH-DSEFPACRECH 1226
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 99/256 (38%), Gaps = 37/256 (14%)
Query: 11 FFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQ 68
FF ++ G C+ +GP+C++C YY C C CN L+ +
Sbjct: 969 FFATSCHHEPQSLGLTCACREGHEGPSCDRCSPGYYGNLALPGASCELCLCNNNIDLDDR 1028
Query: 69 CNSEGR----CQCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGS-VKNTP-----N 117
+G +C G +C C +Y + E CK C C+ G+ V P
Sbjct: 1029 NACDGVTGECLRCLHNTMGPQCQDCKPGYYGNALERDCKECSCDRRGTKVTQCPLGSPCF 1088
Query: 118 CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------RRCKRDTYPLGHG 171
CD GQC +G V D + W++ + C D P
Sbjct: 1089 CDPSTGQCPC----RKGVVGVLC--------DECEDGYWNMDGASGCQPCSCD--PANSL 1134
Query: 172 GSLNLQC--NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
+ + C G+C C G +CD C NH+ + C SC+CN G+ + P+CD
Sbjct: 1135 SYVWVSCCVQVTGQCPCLTEFGGQQCDECGENHFGNPDLQCVSCDCNLDGTER--PSCDP 1192
Query: 230 VKGQCECKDNVEGAQC 245
G+C C+ V G C
Sbjct: 1193 ETGECMCRKGVTGIFC 1208
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 118/278 (42%), Gaps = 49/278 (17%)
Query: 1 CNCNGFSNRCF-FDK---ELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYY--------Q 47
C CNG +++C D+ + +++ G G C+ C + G NCE+C D ++ Q
Sbjct: 242 CFCNGHASQCTPVDQGRGDTFSQPGMVHGRCV-CLHNTAGENCERCADFHHDSPWRPGGQ 300
Query: 48 KSGDNFCTACNCN------PIGSLNLQCN---SEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
K+ D C CNC+ + S G C C+ G TG +C+ C Y
Sbjct: 301 KAAD-VCRRCNCHGHSESCHFDLARFEATGGVSGGMCDNCRHGRTGPQCEHCQAKFYQDP 359
Query: 95 ----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT-ELRVQSRKNFD 149
D +A C C+C+ AGS K CD + GQC + R + + + D
Sbjct: 360 QRARDHPQA-CIRCDCDLAGS-KGGGLCDPLTGQCLCKDNTEGQRCDRCKYGFFNLQPDD 417
Query: 150 PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG 209
P G + C+ + G GS + G C C P G CDRC V + G +
Sbjct: 418 PNG-----CQECR--CHVSGTVGSCD---PVTGGCDCDPLAVGPLCDRCLVGFWGLGNSL 467
Query: 210 --CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+C+ G+ + C +GQC C N+ G +C
Sbjct: 468 FRCSPCDCDLGGA--QSTQCSPEEGQCRCLPNMVGRRC 503
>gi|56788965|gb|AAH88400.1| Lamb2 protein [Rattus norvegicus]
Length = 1593
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 111/265 (41%), Gaps = 79/265 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG S+ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 350 CECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPAA 409
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C+C+P+GS + +C+S G+C+CK V G +C +C + +
Sbjct: 410 CRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSAS---- 465
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
NP G C+ Q +SRG V P G
Sbjct: 466 ---NPRG--------------CQRCQCNSRGTV-------------PGGT---------- 485
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGS 220
C+S G C CK VTGD CDRC H+ GC+ C+C+ G+
Sbjct: 486 -------------PCDSSSGTCFCKRLVTGDGCDRCLPGHWGLSHDLLGCRPCDCDVGGA 532
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ P CD GQC C+ ++ G +C
Sbjct: 533 LD--PQCDEATGQCRCRPHMIGRRC 555
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C +GP+C C+ ++ ++ C C CN +G+ +C S
Sbjct: 1006 HTGQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGTDPQRCPSTDLCHCDPST 1065
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CDRC N ++F GC+ C C+P S P C+ GQC
Sbjct: 1066 GQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQPCACHP--SRARGPTCNEFTGQCH-CHAG 1122
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D G QC+ S G C C+PGV
Sbjct: 1123 FGGRTCSE--CQELHWGDPG----LQCRACDCDPR-----GIDKPQCHRSTGHCSCRPGV 1171
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1172 SGVRCDQC 1179
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +CN G +C+CKPGV G +CD C +Y FG AGC++C+C+P G
Sbjct: 781 NGALPCQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDG 840
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 841 ALSAL--CEGTSGQC 853
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ +CN G +C+CKPGV G +CD C +Y FG AGC++C+C+P G++ C+
Sbjct: 792 GSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDGALSAL--CEGT 849
Query: 231 KGQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 850 SGQCLCRTGAFGLRC 864
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 103/236 (43%), Gaps = 26/236 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ G C+ C YY G C AC C+P G+L+ C + G+C C+ G
Sbjct: 801 HGGQC-RCKPGVVGRRCDACATGYY-GFGPAGCQACQCSPDGALSALCEGTSGQCLCRTG 858
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CD C + F C+ C CN CD+ G C + + G H E
Sbjct: 859 AFGLRCDHCQRGQWGF--PNCRPCVCN-----GRADECDAHTGACLGCRDYTGGE-HCE- 909
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL--QCNSEGR-----CQCKPGVTGD 193
R + + DP R+ +C+ P G G + C+ +G C C+ G TG
Sbjct: 910 RCIAGFHGDP---RLPYGGQCRPCPCPEGPGSQRHFATSCHRDGYSQQIVCHCRAGYTGL 966
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+C+ C H+ D + G C+ CEC+ + CD GQC C + EG C
Sbjct: 967 RCEACAPGHFGDPSKPGGRCQLCECSGNIDPTDPGACDPHTGQCLRCLHHTEGPHC 1022
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 109/274 (39%), Gaps = 54/274 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 880 CVCNGRADEC---------DAHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPC 930
Query: 58 NCNPIGS-----LNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P G C+ +G C C+ G TG +C+ C H+ D + G C+ C
Sbjct: 931 PC-PEGPGSQRHFATSCHRDGYSQQIVCHCRAGYTGLRCEACAPGHFGDPSKPGGRCQLC 989
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQS--RKNFDPAGNR 154
EC+ + CD GQC + G H + QS R + G
Sbjct: 990 ECSGNIDPTDPGACDPHTGQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGT- 1048
Query: 155 IWDLRRCKRDTYPLGHGGSLNL-QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
D +RC S +L C+ S G+C C P V G CDRC N ++F GC+
Sbjct: 1049 --DPQRCP----------STDLCHCDPSTGQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQ 1096
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S P C+ GQC C G C
Sbjct: 1097 PCACHP--SRARGPTCNEFTGQCHCHAGFGGRTC 1128
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C G G C C H+ C++C+C+P G K P C G C C+ V
Sbjct: 1115 GQCHCHAGFGGRTCSECQELHWGDPGLQCRACDCDPRGIDK--PQCHRSTGHCSCRPGVS 1172
Query: 242 GAQC 245
G +C
Sbjct: 1173 GVRC 1176
>gi|156380830|ref|XP_001631970.1| predicted protein [Nematostella vectensis]
gi|156219019|gb|EDO39907.1| predicted protein [Nematostella vectensis]
Length = 256
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 95/191 (49%), Gaps = 25/191 (13%)
Query: 57 CNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNCNP G+ NL C+ S GRC C+ + G KCD C + H++F CK+C CN AGS ++
Sbjct: 1 CNCNPEGATNLVCDQSTGRCPCRTRIRGKKCDLCPLGHFNFPR--CKACNCNTAGS--HS 56
Query: 116 PNCDSVKGQCESA-QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
C+ + G+C +++ R + + NF D C D PL +
Sbjct: 57 FMCNELTGECPCKDKIAGR---QCDRCLWGFFNFP-------DCWWCDCD--PLTTKDEI 104
Query: 175 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
C++ G C CK G +C +C +Y F C +C CN GS + +CD G+C
Sbjct: 105 ---CDNTGSCVCKDNFQGHRCQKCMTGYYGF--PLCITCNCNVQGS--ESQSCDQASGKC 157
Query: 235 ECKDNVEGAQC 245
CK NV G +C
Sbjct: 158 TCKKNVIGWKC 168
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 95/238 (39%), Gaps = 39/238 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
CNCN + F EL G C C+ G C++C ++ NF C C+
Sbjct: 47 CNCNTAGSHSFMCNELT------GEC-PCKDKIAGRQCDRCLWGFF-----NFPDCWWCD 94
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 118
C+P+ + + C++ G C CK G +C +C +Y F C +C CN GS + +C
Sbjct: 95 CDPLTTKDEICDNTGSCVCKDNFQGHRCQKCMTGYYGF--PLCITCNCNVQGS--ESQSC 150
Query: 119 DSVKGQCE------SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
D G+C + + ++ N DP G + + LG
Sbjct: 151 DQASGKCTCKKNVIGWKCDMCAKDLVSFPACTKCNCDPGGTVVLPGQSKVGSASVLGQS- 209
Query: 173 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNC 227
C CK V G CDRC +++F +GC +C C+ G++ C
Sbjct: 210 -----------CMCKMNVQGTLCDRCRFGYFNFSAENPSGCTTCGCSTRGTMAAMRGC 256
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 86/205 (41%), Gaps = 40/205 (19%)
Query: 54 CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS- 111
C ACNCN GS + CN G C CK + G +CDRC ++F + C C+C+P +
Sbjct: 44 CKACNCNTAGSHSFMCNELTGECPCKDKIAGRQCDRCLWGFFNFPD--CWWCDCDPLTTK 101
Query: 112 ---VKNTPNC---DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
NT +C D+ +G Q G L + N + ++ D
Sbjct: 102 DEICDNTGSCVCKDNFQGH--RCQKCMTGYYGFPLCITCNCNVQGSESQSCD-------- 151
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV---- 221
+ G+C CK V G KCD C + F C C C+P G+V
Sbjct: 152 -------------QASGKCTCKKNVIGWKCDMCAKDLVSF--PACTKCNCDPGGTVVLPG 196
Query: 222 KNTPNCDSVKGQ-CECKDNVEGAQC 245
++ SV GQ C CK NV+G C
Sbjct: 197 QSKVGSASVLGQSCMCKMNVQGTLC 221
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK-NFDPAGNRIWDLRRCK 162
C CNP G+ CD S GR R++ +K + P G+ ++ RCK
Sbjct: 1 CNCNPEGATNLV--CDQ-----------STGRCPCRTRIRGKKCDLCPLGH--FNFPRCK 45
Query: 163 RDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
GS + CN G C CK + G +CDRC ++F + C C+C+P +
Sbjct: 46 --ACNCNTAGSHSFMCNELTGECPCKDKIAGRQCDRCLWGFFNFPD--CWWCDCDPLTTK 101
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCR 246
CD+ G C CKDN +G +C+
Sbjct: 102 DEI--CDNT-GSCVCKDNFQGHRCQ 123
>gi|410979929|ref|XP_003996333.1| PREDICTED: netrin-1 [Felis catus]
Length = 410
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 87 CNCNLHARRCRFNTELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPVTHRKA 146
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 147 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 205
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 206 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCRKDY 241
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C +Y D G+ CK+C+C+P G+ T C+ GQC CKD
Sbjct: 117 CRHNTAGRHCHYCKEGYYRDMGKPVTHRKACKACDCHPVGAAGKT--CNQTTGQCPCKDG 174
Query: 240 VEGAQC 245
V G C
Sbjct: 175 VTGITC 180
>gi|345323689|ref|XP_001506606.2| PREDICTED: laminin subunit beta-2 [Ornithorhynchus anatinus]
Length = 1813
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 25/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE---------GR 74
G C C +GP+C CR YY ++ + C C+CN +G+ QC S+ G+
Sbjct: 1020 GQCQRCLYHSEGPHCAYCRPGYYGQAAHHSCRRCSCNFLGTERSQCPSQEECHCDQSSGQ 1079
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C P + G CDRC N ++ GC+ C+C+P+ SV +P+C+ GQC +
Sbjct: 1080 CPCLPNIQGQNCDRCAPNFWNLASGQGCQPCDCHPSHSV--SPSCNEFTGQCH-CRAGFG 1136
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
GR T+ Q DP+ R C D G LQC+ + G C C+PGV+G
Sbjct: 1137 GRACTD--CQENHWGDPS----QQCRACDCDPR-----GIETLQCHRTTGHCNCRPGVSG 1185
Query: 193 DKCDRC 198
+CD+C
Sbjct: 1186 VRCDQC 1191
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P GSL+ +CN G +CQCK V G +CDRC V Y FG +GC++C+CNP G++ +
Sbjct: 798 CQCDPQGSLSSECNPHGGQCQCKANVVGRRCDRCAVGTYGFGPSGCRACQCNPEGTLSSL 857
Query: 116 PNCDSVKGQC 125
CDSV GQC
Sbjct: 858 --CDSVSGQC 865
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 95/223 (42%), Gaps = 52/223 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CN S C FD ++ +G+ GG C CQ + G +C+ CR YY+ +
Sbjct: 388 CECNQHSRSCHFDMAVFLASGNVSGGVCDGCQHNTMGQHCQLCRPFYYRDPRADLRSPVA 447
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFG---EAG 100
C AC+C+P GSLN C+S G+C+CK V G +C C + G
Sbjct: 448 CRACDCDPSGSLNGGLCDSHDDPALGLLAGQCRCKDHVAGPRCQSCRDGFFGLSADNSQG 507
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C C+P G+V P CD V G C +L + P+ ++ R
Sbjct: 508 CRRCRCDPRGTVSGGPPCDPVSGDCFCKRLVT----------------GPSCDQCLGEER 551
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
C R+T G+C C+ + G +C++ HY
Sbjct: 552 CARET----------------GQCHCRNHMIGRRCNQVQPGHY 578
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 13/89 (14%)
Query: 168 LGHGGSLNLQCNSE-----------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
L H G+L QC+ + G+CQCK V G +CDRC V Y FG +GC++C+CN
Sbjct: 790 LLHDGALPCQCDPQGSLSSECNPHGGQCQCKANVVGRRCDRCAVGTYGFGPSGCRACQCN 849
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P G++ + CDSV GQC C+ G++C
Sbjct: 850 PEGTLSSL--CDSVSGQCPCRPGAFGSRC 876
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 107/237 (45%), Gaps = 28/237 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
HGG C C+ + G C++C Y G + C AC CNP G+L+ C+S G+C C+PG
Sbjct: 813 HGGQC-QCKANVVGRRCDRCAVGTY-GFGPSGCRACQCNPEGTLSSLCDSVSGQCPCRPG 870
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CD C H+ F C+ C CN + CD G C++ R HT
Sbjct: 871 AFGSRCDHCQPGHWGFPR--CRPCHCN-----GHAEECDQRTGACQAC------RDHTAG 917
Query: 141 RVQSRKNFDPAGNRIWDL-RRCKRDTYPLGHGGSLNL--QCNSEGR-----CQCKPGVTG 192
R GN + C+ P G G + C+ +G C C+PG TG
Sbjct: 918 DRCDRCVAGFYGNPVLTSGGHCRPCPCPEGPGSRRHFAASCHQDGHSHQVICHCQPGHTG 977
Query: 193 DKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQC 245
+C+ C HY + +AG C+ C+C+ + CD GQC+ C + EG C
Sbjct: 978 PRCEECAPGHYGNPSQAGGRCQPCQCSNNIDPTDPEACDRRTGQCQRCLYHSEGPHC 1034
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 89/246 (36%), Gaps = 84/246 (34%)
Query: 29 CQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNP------------IGSLNLQC 69
C+ GP+CE+C+D ++ + S + C C CN + S N+
Sbjct: 353 CKHRTSGPHCERCQDFHHDRPWRPAEPSDPHICRECECNQHSRSCHFDMAVFLASGNV-- 410
Query: 70 NSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNPAGSVKNTPNCDSVK 122
S G C C+ G C C +Y A C++C+C+P+GS+ N CDS
Sbjct: 411 -SGGVCDGCQHNTMGQHCQLCRPFYYRDPRADLRSPVACRACDCDPSGSL-NGGLCDS-- 466
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG 182
+ DPA + G
Sbjct: 467 ------------------------HDDPALGLL-------------------------AG 477
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+C+CK V G +C C + GC+ C C+P G+V P CD V G C CK
Sbjct: 478 QCRCKDHVAGPRCQSCRDGFFGLSADNSQGCRRCRCDPRGTVSGGPPCDPVSGDCFCKRL 537
Query: 240 VEGAQC 245
V G C
Sbjct: 538 VTGPSC 543
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 93/244 (38%), Gaps = 36/244 (14%)
Query: 21 GHGGHCL-DCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNC-NPIGSLNLQC--NSEGR 74
GH + CQ GP CE+C +Y C C C N I + + G+
Sbjct: 962 GHSHQVICHCQPGHTGPRCEECAPGHYGNPSQAGGRCQPCQCSNNIDPTDPEACDRRTGQ 1021
Query: 75 CQ-CKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNT-P-----NCDSVKGQCE 126
CQ C G C C +Y C+ C CN G+ ++ P +CD GQC
Sbjct: 1022 CQRCLYHSEGPHCAYCRPGYYGQAAHHSCRRCSCNFLGTERSQCPSQEECHCDQSSGQCP 1081
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR----DTYPLGHGGSLNLQCNS-E 181
L +N D W+L + D +P S++ CN
Sbjct: 1082 C------------LPNIQGQNCDRCAPNFWNLASGQGCQPCDCHP---SHSVSPSCNEFT 1126
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ G G C C NH+ C++C+C+P G T C G C C+ V
Sbjct: 1127 GQCHCRAGFGGRACTDCQENHWGDPSQQCRACDCDPRG--IETLQCHRTTGHCNCRPGVS 1184
Query: 242 GAQC 245
G +C
Sbjct: 1185 GVRC 1188
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 73/190 (38%), Gaps = 44/190 (23%)
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C+ E K G + C ++ G C+C+P GS+ + C+ GQC
Sbjct: 763 RCHEESLTPAK-GSPAEACAPLLISLAALLHDGALPCQCDPQGSLSS--ECNPHGGQC-- 817
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE------ 181
Q + N G R RC TY G G QCN E
Sbjct: 818 ---------------QCKANV--VGRRC---DRCAVGTYGFGPSGCRACQCNPEGTLSSL 857
Query: 182 -----GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE- 235
G+C C+PG G +CD C H+ F C+ C CN + CD G C+
Sbjct: 858 CDSVSGQCPCRPGAFGSRCDHCQPGHWGFPR--CRPCHCN-----GHAEECDQRTGACQA 910
Query: 236 CKDNVEGAQC 245
C+D+ G +C
Sbjct: 911 CRDHTAGDRC 920
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Query: 186 CKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNPAGSV-------KNTPNCDSVKG 232
C+ G C C +Y A C++C+C+P+GS+ + P + G
Sbjct: 418 CQHNTMGQHCQLCRPFYYRDPRADLRSPVACRACDCDPSGSLNGGLCDSHDDPALGLLAG 477
Query: 233 QCECKDNVEGAQCRS 247
QC CKD+V G +C+S
Sbjct: 478 QCRCKDHVAGPRCQS 492
>gi|348521256|ref|XP_003448142.1| PREDICTED: netrin-4 [Oreochromis niloticus]
Length = 614
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 70/139 (50%), Gaps = 23/139 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CNG + C FD + +G GG C DC + +G CEKC+ +Y+ + +
Sbjct: 325 CKCNGHAQTCRFDWTAWRESGQRSGGVC-DCLHNTEGRQCEKCKPGFYRDPNRPHAAPDS 383
Query: 54 CTACNCNPIGSLNLQCN-------SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C CNC+P+GS+ + G C CKPGV G CDRC V ++ F E GC+ C+C
Sbjct: 384 CKPCNCHPMGSVPFHLADGSLCDPANGNCICKPGVGGAHCDRCMVGYWGFHEYGCRPCDC 443
Query: 107 NPAGSVKNTPNCDSVKGQC 125
AG +CD G C
Sbjct: 444 --AG------DCDPFTGDC 454
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CKPGV G CDRC V ++ F E GC+ C+C AG +CD G C +
Sbjct: 408 ANGNCICKPGVGGAHCDRCMVGYWGFHEYGCRPCDC--AG------DCDPFTGDCMFGSD 459
Query: 240 VE 241
+E
Sbjct: 460 LE 461
>gi|345326706|ref|XP_001509942.2| PREDICTED: netrin-4-like [Ornithorhynchus anatinus]
Length = 355
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 43/163 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYY------------ 46
C CNG ++ C FD +++ +G+ GG C +CQ + +G +C++C+ +Y
Sbjct: 39 CKCNGHADTCHFDIDIWQASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 98
Query: 47 -------------QKSGDNFCT-ACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDK 85
++ G+N C+C+P+G+ L +S G C CKPGV G
Sbjct: 99 CKSILPLWKIVDSKRKGENSTKKVCSCHPVGTAVLPFSSVTFCDPSNGDCPCKPGVAGPH 158
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
CDRC V ++ FGE GC+ C+C AGS CD + G C S+
Sbjct: 159 CDRCMVGYWGFGEYGCRPCDC--AGS------CDPLTGDCTSS 193
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FGE GC+ C+C AGS CD + G C
Sbjct: 144 SNGDCPCKPGVAGPHCDRCMVGYWGFGEYGCRPCDC--AGS------CDPLTGDC 190
>gi|194752203|ref|XP_001958412.1| GF10909 [Drosophila ananassae]
gi|190625694|gb|EDV41218.1| GF10909 [Drosophila ananassae]
Length = 3720
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ GS + CN++G+C C+P G +CD
Sbjct: 606 NCLNNFAGKQCTLCSAGYYSYPD---CLPCHCDSHGSQGVTCNADGQCLCEPNFDGRQCD 662
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C Y+F C+ C C+PAG + C SV G+ + +GR+ E +
Sbjct: 663 SCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKDRVQGRICDECK----- 715
Query: 147 NFDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G +L+ + G+C CKP G +C C
Sbjct: 716 ------PLYWNLNISNADGCENCECWTDGTISALDTCASKSGQCPCKPHTQGRRCQECRD 769
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D A GCK C C+ GS + CD + GQC+C V G C
Sbjct: 770 GTFDLDSASLFGCKDCSCDVGGSWNSV--CDKISGQCKCHPRVTGRAC 815
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 128/315 (40%), Gaps = 101/315 (32%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G SN C +D+E ++ R GG C +CQ + G NC KC YY+ G
Sbjct: 333 CNCHGHSNECKYDEEVNRKGLSLDIHGRYEGGGVCRNCQHNTVGINCNKCMPKYYRPKGK 392
Query: 51 -------------DNF------------------------------------CTACNCNP 61
D+F C C CN
Sbjct: 393 HWNETDVCSPCQCDHFYSTGHCEEETGNCECLAAFQPPNCDSCAYGYYGYPNCRECECNL 452
Query: 62 IGSLNLQCNSEG--RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
G+ C +E +C CK G C +C +Y F E CK+CECN GS+ N +C+
Sbjct: 453 NGTNGYHCEAESGQQCPCKINFAGPYCKQCAEGYYGFPE--CKACECNKIGSITN--DCN 508
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD--TYPL------GHG 171
G+C+ L++ G + E RCK YP +
Sbjct: 509 VTTGECKC--LTNFGGDNCE--------------------RCKHGYFNYPTCSYCDCDNQ 546
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
G+ + CN + G+C C+ G G +CD+C +Y++ + CK C C+ GS T CD+
Sbjct: 547 GTESEICNKQSGQCICREGFGGPRCDQCLPGYYNYPD--CKPCNCSGTGSSAIT--CDNT 602
Query: 231 KGQCECKDNVEGAQC 245
G+C C +N G QC
Sbjct: 603 -GKCNCLNNFAGKQC 616
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 88/207 (42%), Gaps = 47/207 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+LN C+ G+C C
Sbjct: 1936 GECLRCLNNTYGAACNLCAPGFY---GDAIKLKNCQSCDCDDLGTLN--CDPFVGKCTCH 1990
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G++CDRC +HY F GC++C+C GS N+ CD G C + + GR
Sbjct: 1991 ENVIGERCDRCKADHYGFESGLGCRACDC---GSASNSTQCDPHTGHC-ACKPGVTGR-- 2044
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCN-SEGRCQC 186
RC D + G S CN + G+CQC
Sbjct: 2045 -------------------QCDRCAVDHWKYEIDGCTPCNCNQGYSRGFGCNPNTGKCQC 2085
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PGV GD+CD C + GC+ C
Sbjct: 2086 LPGVIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 110/283 (38%), Gaps = 97/283 (34%)
Query: 22 HGGHCLD-------------------CQGDRDGPNCEKCRDNYYQKS-----GDNFCTAC 57
+GG+C+ CQ G +CE+C YY + GD C C
Sbjct: 1802 YGGYCIPCECNGHSETCDCATGICTACQHGTQGDHCEQCVAGYYGDATRGTPGD--CMIC 1859
Query: 58 NCN-PIGSLNL-------QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
C P S N + +E C+C+PG TG +C+ C Y EA CK CEC
Sbjct: 1860 ACPLPFDSNNFATSCEISESGNEIHCECQPGYTGPRCEACANGFYGQPEALGEVCKPCEC 1919
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ + ++ +CD+ G+C RC +TY
Sbjct: 1920 SGNINPEDQGSCDTRTGEC---------------------------------LRCLNNTY 1946
Query: 167 --------PLGHGGSLNLQ-CNS--------------EGRCQCKPGVTGDKCDRCDVNHY 203
P +G ++ L+ C S G+C C V G++CDRC +HY
Sbjct: 1947 GAACNLCAPGFYGDAIKLKNCQSCDCDDLGTLNCDPFVGKCTCHENVIGERCDRCKADHY 2006
Query: 204 DFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F GC++C+C GS N+ CD G C CK V G QC
Sbjct: 2007 GFESGLGCRACDC---GSASNSTQCDPHTGHCACKPGVTGRQC 2046
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 117/276 (42%), Gaps = 58/276 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNFCTACNCN-PIGSLNL-------QCN 70
G C CQ G +CE+C YY + GD C C C P S N +
Sbjct: 1823 GICTACQHGTQGDHCEQCVAGYYGDATRGTPGD--CMICACPLPFDSNNFATSCEISESG 1880
Query: 71 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC-- 125
+E C+C+PG TG +C+ C Y EA CK CEC+ + ++ +CD+ G+C
Sbjct: 1881 NEIHCECQPGYTGPRCEACANGFYGQPEALGEVCKPCECSGNINPEDQGSCDTRTGECLR 1940
Query: 126 -------ESAQLSSRGRVHTELRVQS----------RKNFDPAGNR------IWDLR--R 160
+ L + G +++++ N DP + + R R
Sbjct: 1941 CLNNTYGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTLNCDPFVGKCTCHENVIGERCDR 2000
Query: 161 CKRDTYPLGHG----------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAG 209
CK D Y G S + QC+ G C CKPGVTG +CDRC V+H+ + G
Sbjct: 2001 CKADHYGFESGLGCRACDCGSASNSTQCDPHTGHCACKPGVTGRQCDRCAVDHWKYEIDG 2060
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C CN S C+ G+C+C V G +C
Sbjct: 2061 CTPCNCNQGYS--RGFGCNPNTGKCQCLPGVIGDRC 2094
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 94/220 (42%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + GP C++C + YY G C AC CN IGS+ CN + G C+C GD C+
Sbjct: 470 CKINFAGPYCKQCAEGYY---GFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCE 526
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC H F C C+C+ G+ C+ GQC + R L
Sbjct: 527 RC--KHGYFNYPTCSYCDCDNQGTESEI--CNKQSGQCICREGFGGPRCDQCL------- 575
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P D + C GS + C++ G+C C G +C C +Y + +
Sbjct: 576 --PGYYNYPDCKPCN-----CSGTGSSAITCDNTGKCNCLNNFAGKQCTLCSAGYYSYPD 628
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C C+ GS T N D GQC C+ N +G QC S
Sbjct: 629 --CLPCHCDSHGSQGVTCNAD---GQCLCEPNFDGRQCDS 663
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C P V G+ C++C N Y F + GC+ C CN G CD G CEC+D
Sbjct: 1432 TTGECMCPPNVIGEMCEKCAPNTYGFHQVIGCEECNCNHMGIANGNTQCDLFNGTCECRD 1491
Query: 239 NVEGAQC 245
N+EG C
Sbjct: 1492 NIEGRAC 1498
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL C+ + DG C+ C++ +Y NF C CNC+P G ++ C S C+
Sbjct: 648 GQCL-CEPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 701
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK V G CD C +++ + GC++CEC G++ C S GQC + ++
Sbjct: 702 CKDRVQGRICDECKPLYWNLNISNADGCENCECWTDGTISALDTCASKSGQC-PCKPHTQ 760
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R FD ++ + C D GGS N C+ G+C+C P VTG
Sbjct: 761 GRRCQECR---DGTFDLDSASLFGCKDCSCDV-----GGSWNSVCDKISGQCKCHPRVTG 812
Query: 193 DKCDRCDVNHY 203
C + H+
Sbjct: 813 RACTQPLTTHF 823
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 53/225 (23%)
Query: 39 EKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
E C+ + + + D + CNC+ GS + +C+ G +CQCKP V +C C +Y
Sbjct: 1355 EFCKKSVFSLTADYNSGSLPCNCDYAGSTSFECHPFGGQCQCKPNVIERQCGACRSRYYG 1414
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
F + CK C+C P+ ++ C+ G+C N I
Sbjct: 1415 FPD--CKPCQC-PSSAM-----CEPTTGECMCPP-----------------------NVI 1443
Query: 156 WDL-RRCKRDTYPL-----------GHGGSLN--LQCNS-EGRCQCKPGVTGDKCDRCDV 200
++ +C +TY H G N QC+ G C+C+ + G CD C
Sbjct: 1444 GEMCEKCAPNTYGFHQVIGCEECNCNHMGIANGNTQCDLFNGTCECRDNIEGRACDVCAH 1503
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+++F C+ C C+ G+ CD V G C CK NV G C
Sbjct: 1504 GYFNFPH--CQQCSCHKPGTEIEV--CDKVDGSCFCKKNVVGRDC 1544
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H GHC C+ G C++C ++++ D CT CNCN S CN + G+CQC PG
Sbjct: 2031 HTGHCA-CKPGVTGRQCDRCAVDHWKYEIDG-CTPCNCNQGYSRGFGCNPNTGKCQCLPG 2088
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSC 104
V GD+CD C + GC+ C
Sbjct: 2089 VIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + C CR YY G C C C P ++ C + G C C P V
Sbjct: 1391 GGQC-QCKPNVIERQCGACRSRYY---GFPDCKPCQC-PSSAM---CEPTTGECMCPPNV 1442
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE 126
G+ C++C N Y F + GC+ C CN G CD G CE
Sbjct: 1443 IGEMCEKCAPNTYGFHQVIGCEECNCNHMGIANGNTQCDLFNGTCE 1488
>gi|359319942|ref|XP_547393.4| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-3 [Canis lupus
familiaris]
Length = 1205
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 124/267 (46%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ HGG C +C+ +G NCE+C+ +Y++
Sbjct: 349 CDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPIQET 408
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ + C+ G+C CK V G++CD C A GC C+CN
Sbjct: 409 CIPCECDPDGAVPGVPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNI 468
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGR----VHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
GS ++ P CD GQC + ++ S + +P C D
Sbjct: 469 LGSRRDLP-CDEETGQCLCLPHVVGPKCDQCAPYHWKLASGRGCEP----------CACD 517
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH---YDFGEA--GCKSCECNPA 218
+ +L+ QCN G+C C+ G G C+ + +G+A GC++C+C+
Sbjct: 518 PH-----NALSPQCNQFTGQCPCREGFGGLTCNAAALRQCPDRTYGDAGSGCRACDCDFR 572
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD G+C C+ + G +C
Sbjct: 573 GT--EGPGCDKASGRCLCRPGLTGPRC 597
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 106/243 (43%), Gaps = 38/243 (15%)
Query: 29 CQGDRDGPNCEKCRDNY----YQKSGD---NFCTACNCN---------PIGSLNLQCNSE 72
CQ + GPNCE+C Y ++ + D + C C+CN P Q
Sbjct: 314 CQHNTAGPNCERCAPFYNNQPWRPADDQDPHECQRCDCNGHSETCHFDPAVFAASQGAHG 373
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C C+ G C+RC ++++ G C CEC+P G+V P CD V GQC
Sbjct: 374 GVCDNCRDHTEGKNCERCQLHYFRNRRPGAPIQETCIPCECDPDGAVPGVP-CDPVTGQC 432
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
+ V E + F G + + C R D LG +L C+ E G+
Sbjct: 433 -----VCKEHVQGERCDLCKPGF--TGLTYANPQGCHRCDCNILG--SRRDLPCDEETGQ 483
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C P V G KCD+C H+ GC+ C C+P ++ +P C+ GQC C++ G
Sbjct: 484 CLCLPHVVGPKCDQCAPYHWKLASGRGCEPCACDPHNAL--SPQCNQFTGQCPCREGFGG 541
Query: 243 AQC 245
C
Sbjct: 542 LTC 544
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 40/193 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C C+CN +GS +L C+ E G+C C P
Sbjct: 430 GQCV-CKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDLPCDEETGQCLCLP 488
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C H+ GC+ C C+P ++ +P C+ GQC
Sbjct: 489 HVVGPKCDQCAPYHWKLASGRGCEPCACDPHNAL--SPQCNQFTGQCPC----------- 535
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------------SEGRCQ 185
R+ F LR+C TY G GS C+ + GRC
Sbjct: 536 ------REGFGGLTCNAAALRQCPDRTY--GDAGSGCRACDCDFRGTEGPGCDKASGRCL 587
Query: 186 CKPGVTGDKCDRC 198
C+PG+TG +CD+C
Sbjct: 588 CRPGLTGPRCDQC 600
>gi|195588206|ref|XP_002083849.1| GD13136 [Drosophila simulans]
gi|194195858|gb|EDX09434.1| GD13136 [Drosophila simulans]
Length = 3399
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ GS + CNS+G+C C+P G +CD
Sbjct: 342 NCLNNFAGKQCTLCTAGYYSYPD---CLPCHCDSHGSQGVSCNSDGQCLCQPNFDGRQCD 398
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 399 SCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECK----- 451
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G +L+ + G+C CKP G +C C
Sbjct: 452 ------PLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 505
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D A GCK C C+ GS ++ CD + GQC+C + G C
Sbjct: 506 GTFDLDSASLFGCKDCSCDVGGSWQSV--CDKISGQCKCHPRITGLAC 551
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 104/267 (38%), Gaps = 88/267 (32%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS------------------GDNFCTACNCNPIGSL 65
G C CQ +G +CE+C YY + +NF T+C + G
Sbjct: 1559 GICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESG-- 1616
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVK 122
+ C+CKPG TG +C+ C Y E+ CK CEC+ + ++ +CD+
Sbjct: 1617 -----DQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGSCDTRT 1671
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--------PLGHGGSL 174
G+C RC +T+ P +G ++
Sbjct: 1672 GEC---------------------------------LRCLNNTFGAACNLCAPGFYGDAI 1698
Query: 175 NLQ-CNS--------------EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPA 218
L+ C S G C C V GD+CDRC +HY F GC++C+C
Sbjct: 1699 KLKNCQSCDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDC--- 1755
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ N+ CD G C CK V G QC
Sbjct: 1756 GAASNSTQCDPHTGHCACKSGVTGRQC 1782
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYD 95
NCE+C+ Y+ C+ C+C+ G+ + CN + G+C C+ G G +CD+C Y+
Sbjct: 260 NCERCKHGYFNYPT---CSYCDCDNQGTESEICNKQSGQCICREGFGGPRCDQCLPGFYN 316
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
+ + CK C C+ GS T CD+ G+C L++ L ++
Sbjct: 317 YPD--CKPCNCSSTGSSAIT--CDNT-GKCNC--LNNFAGKQCTLCTAGYYSYP------ 363
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
D C D++ GS + CNS+G+C C+P G +CD C Y+F C+ C C
Sbjct: 364 -DCLPCHCDSH-----GSQGVSCNSDGQCLCQPNFDGRQCDSCKEGFYNF--PSCEDCNC 415
Query: 216 NPAGSVKNTPNCDSVK--GQCECKDNVEGAQC 245
+PAG + C SV C+CK+ V G C
Sbjct: 416 DPAGVIDKFAGCGSVPVGELCKCKERVTGRIC 447
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C P V GD C++C N Y F + GC+ C CNP G CD G CEC+
Sbjct: 1168 TTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ 1227
Query: 239 NVEGAQC 245
N+EG C
Sbjct: 1228 NIEGRAC 1234
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+ C+ G C C
Sbjct: 1672 GECLRCLNNTFGAACNLCAPGFY---GDAIKLKNCQSCDCDDLGTQT--CDPFVGVCTCH 1726
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V GD+CDRC +HY F GC++C+C G+ N+ CD G C + + GR
Sbjct: 1727 ENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNSTQCDPHTGHC-ACKSGVTGR-- 1780
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCN-SEGRCQC 186
RC D + G S CN + G+CQC
Sbjct: 1781 -------------------QCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQC 1821
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PGV GD+CD C + GC+ C
Sbjct: 1822 LPGVIGDRCDACPNRWVLIKDEGCQEC 1848
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 84/206 (40%), Gaps = 53/206 (25%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+ GS + +C+ G +CQCKP V C C +Y F + CK C+C N+
Sbjct: 1111 CNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPD--CKPCKC------PNS 1162
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY-------- 166
C+ G+C N I DL +C +TY
Sbjct: 1163 AMCEPTTGECMCPP-----------------------NVIGDLCEKCAPNTYGFHQVIGC 1199
Query: 167 ------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
P+G N QC+ G C+C+ + G CD C +++F C+ C C+ G
Sbjct: 1200 EECACNPMGIANG-NSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPH--CEQCSCHKPG 1256
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD + G C CK NV G C
Sbjct: 1257 TELEV--CDKIDGACFCKKNVVGRDC 1280
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + C CR YY G C C C P ++ C + G C C P V
Sbjct: 1127 GGQC-QCKPNVIERTCGACRSRYY---GFPDCKPCKC-PNSAM---CEPTTGECMCPPNV 1178
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
GD C++C N Y F + GC+ C CNP G CD G CE Q + GR
Sbjct: 1179 IGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ-NIEGRA---- 1233
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDT--YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
D N ++ C++ + P G L + +G C CK V G CD+C
Sbjct: 1234 -------CDVCSNGYFNFPHCEQCSCHKP---GTELEVCDKIDGACFCKKNVVGRDCDQC 1283
Query: 199 DVNHYDFGEA---GCKSCEC 215
Y+ E+ GC +C C
Sbjct: 1284 VDGTYNLQESNPDGCTTCFC 1303
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H GHC C+ G C++C ++++ D CT CNCN S CN + G+CQC PG
Sbjct: 1767 HTGHCA-CKSGVTGRQCDRCAVDHWKYEKDG-CTPCNCNQGYSRGFGCNPNTGKCQCLPG 1824
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSC-ECNPA---GSVKNTPNCDSVKGQCESAQLSSRGRV 136
V GD+CD C + GC+ C C+ A + + DSV S +L+ ++
Sbjct: 1825 VIGDRCDACPNRWVLIKDEGCQECNNCHHALLDVTDRMRYQIDSVLEDFNSPKLNYYDQL 1884
Query: 137 HTELRVQSRKNFDP 150
EL + K DP
Sbjct: 1885 ADELEPKV-KELDP 1897
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL CQ + DG C+ C++ +Y NF C CNC+P G ++ C S C+
Sbjct: 384 GQCL-CQPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 437
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK VTG C+ C +++ + GC+ C+C G++ C S GQC + ++
Sbjct: 438 CKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQC-PCKPHTQ 496
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R FD ++ + C D GGS C+ G+C+C P +TG
Sbjct: 497 GRRCQECR---DGTFDLDSASLFGCKDCSCDV-----GGSWQSVCDKISGQCKCHPRITG 548
Query: 193 DKCDRCDVNHY 203
C + H+
Sbjct: 549 LACTQPLTTHF 559
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 41 CRDNYYQKS-----GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY- 94
R NY++++ D + T + + G+ Q + RC C PG +G C+ C +Y
Sbjct: 1473 IRANYWEQTLVTHLADVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYR 1532
Query: 95 -DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G G C CECN ++ CD G C Q + G H E R S +
Sbjct: 1533 DPSGPYGGYCIPCECN-----GHSETCDCATGICSKCQHGTEGD-HCE-RCVSGYYGNAT 1585
Query: 152 GNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
D C D+ ++ + + C+CKPG TG +C+ C Y E
Sbjct: 1586 NGTPGDCMICACPLPFDSNNFATSCEIS-ESGDQIHCECKPGYTGPRCESCANGFYGEPE 1644
Query: 208 A---GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+ CK CEC+ + ++ +CD+ G+C C +N GA C
Sbjct: 1645 SIGQVCKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAAC 1686
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS + C++ G+C C G +C C +Y + + C C C+ GS + N D
Sbjct: 329 GSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPD--CLPCHCDSHGSQGVSCNSD--- 383
Query: 232 GQCECKDNVEGAQCRS 247
GQC C+ N +G QC S
Sbjct: 384 GQCLCQPNFDGRQCDS 399
>gi|355753755|gb|EHH57720.1| Netrin-1, partial [Macaca fascicularis]
Length = 334
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 71 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPISHRKA 130
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 131 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 189
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
T + C+S +S+G++ ++ +K++
Sbjct: 190 TTTASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 225
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C +Y D G+ CK+C+C+P G+ T C+ GQC CKD
Sbjct: 101 CRHNTAGRHCHYCKEGYYRDMGKPISHRKACKACDCHPVGAAGKT--CNQTTGQCPCKDG 158
Query: 240 VEGAQC 245
V G C
Sbjct: 159 VTGITC 164
>gi|348511211|ref|XP_003443138.1| PREDICTED: netrin-1-like [Oreochromis niloticus]
Length = 600
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ +
Sbjct: 340 CHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKSISHRRA 399
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C PA S
Sbjct: 400 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPAASP 458
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
T + CES +S+G++ ++ +K++
Sbjct: 459 TATYSSYEEPTDCESHCKASKGKMKITMKKYCKKDY 494
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG +++C D+E G +C+ + GP C++C+ +Y + N
Sbjct: 284 CKCNGHASKCVKDRE-------GNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANE 336
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C AC+CN N++ S G C C+ G C C +Y D ++
Sbjct: 337 CVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKSISH 396
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 397 RRACKACDCHPVGAAGKT--CNQTTGQC 422
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 86/224 (38%), Gaps = 48/224 (21%)
Query: 27 LDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR--CQCKPGVTG 83
L GD + + E RD+Y+ D C CN S ++ + EG C+CK G
Sbjct: 253 LHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASKCVK-DREGNLVCECKHNTAG 311
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+CDRC HYD + E N + C + R R + EL
Sbjct: 312 PECDRCKPFHYDRPWQRATAREANECVA-------------CHCNLHARRCRFNMEL--- 355
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVN 201
+ +G R G LN + N+ GR CK G D ++
Sbjct: 356 ----YKLSGRR--------------SGGVCLNCRHNTAGRHCHYCKEGYYRDMTK--SIS 395
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
H CK+C+C+P G+ T C+ GQC CKD V G C
Sbjct: 396 H----RRACKACDCHPVGAAGKT--CNQTTGQCPCKDGVTGITC 433
>gi|395516303|ref|XP_003762330.1| PREDICTED: laminin subunit beta-2-like [Sarcophilus harrisii]
Length = 1563
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 87/186 (46%), Gaps = 25/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPG--- 80
G CL C + +GP C CR YY ++ C C CN +G+ QC S+ +C+C PG
Sbjct: 770 GQCLRCLHNSEGPRCAHCRLGYYGQAAHQSCRRCTCNFLGTERSQCPSQDKCRCDPGSGQ 829
Query: 81 ------VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
+ G CDRC N ++ GC+ C C+P S +P+C+ GQC +
Sbjct: 830 CPCLPNIQGQSCDRCAPNFWNLASGQGCQPCSCHP--SHATSPSCNEFTGQCH-CRAGFG 886
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRCQCKPGVTG 192
GR TE Q DP R C D+ G QC ++ G C C+PGV G
Sbjct: 887 GRTCTE--CQENHWGDPG----LQCRACDCDSR-----GIETPQCHHATGHCVCRPGVAG 935
Query: 193 DKCDRC 198
+CD+C
Sbjct: 936 VRCDQC 941
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 105/237 (44%), Gaps = 26/237 (10%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
HGG C C+ G C C + G + C AC C+P GSL+ C+ + G+C C+P
Sbjct: 562 AHGGQC-PCKPHVTGRRCHPCAPGTF-GFGTSGCRACQCSPEGSLSSLCHEASGQCPCRP 619
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G G +CDRC + F C+ C CN + +CD G C+S + + G H E
Sbjct: 620 GAFGPRCDRCQPGQWGF--PSCRPCHCN-----GHADDCDPRTGSCQSCRDHTAGD-HCE 671
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-------NSEGRCQCKPGVTG 192
R + +P + C+ P G GG + + + C C+PG TG
Sbjct: 672 -RCMAGFYGNPV---LASGGHCRPCPCPEGPGGQRHFATSCHQDRHSQQVICHCQPGYTG 727
Query: 193 DKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+C+ C H+ D G C+ CEC+ + CD GQC C N EG +C
Sbjct: 728 PRCEECAPGHFGDPLRPGGRCQPCECSSNIDPMDPEACDRQTGQCLRCLHNSEGPRC 784
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 112/270 (41%), Gaps = 46/270 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C+CNG ++ C RTG C C+ G +CE+C +Y + C C
Sbjct: 642 CHCNGHADDC------DPRTGS---CQSCRDHTAGDHCERCMAGFYGNPVLASGGHCRPC 692
Query: 58 NC--NPIGSLNLQCN-------SEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCE 105
C P G + + + C C+PG TG +C+ C H+ D G C+ CE
Sbjct: 693 PCPEGPGGQRHFATSCHQDRHSQQVICHCQPGYTGPRCEECAPGHFGDPLRPGGRCQPCE 752
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ + CD GQC +S G R+ + A ++ RRC +
Sbjct: 753 CSSNIDPMDPEACDRQTGQCLRCLHNSEGPRCAHCRL---GYYGQAAHQ--SCRRCTCNF 807
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPG---------VTGDKCDRCDVNHYDFGEA-GCKSCEC 215
G+ QC S+ +C+C PG + G CDRC N ++ GC+ C C
Sbjct: 808 L-----GTERSQCPSQDKCRCDPGSGQCPCLPNIQGQSCDRCAPNFWNLASGQGCQPCSC 862
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+P S +P+C+ GQC C+ G C
Sbjct: 863 HP--SHATSPSCNEFTGQCHCRAGFGGRTC 890
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 55 TACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C C+P GSL+ +C + G +C CKP VTG +C C + FG +GC++C+C+P GS+
Sbjct: 546 VTCQCDPQGSLSSECQAHGGQCPCKPHVTGRRCHPCAPGTFGFGTSGCRACQCSPEGSLS 605
Query: 114 NTPNCDSVKGQC 125
+ C GQC
Sbjct: 606 SL--CHEASGQC 615
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C CK VTG C+RC +H+ GC+ C+C+ G+++ P C GQC C+ +
Sbjct: 319 GACFCKRLVTGRHCERCLADHWGLSHDLLGCRPCDCDVGGALE--PRCAEDSGQCRCRRH 376
Query: 240 VEGAQC 245
+ G +C
Sbjct: 377 MFGRRC 382
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACN--CNPIGSLNLQCNS-EGRCQCKPGVTG 83
C+ GP C++CRD Y+ S + C C C++ G C CK VTG
Sbjct: 270 CKEHVAGPRCQRCRDGYFGLSAADPQGCQRCRGDPRGPVPGGPPCDAGSGACFCKRLVTG 329
Query: 84 DKCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQC 125
C+RC +H+ GC+ C+C+ G+++ P C GQC
Sbjct: 330 RHCERCLADHWGLSHDLLGCRPCDCDVGGALE--PRCAEDSGQC 371
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 93/237 (39%), Gaps = 39/237 (16%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP------IGSLNLQC--NSEGRC-QCKP 79
CQ GP CE+C ++ GD C P I ++ + G+C +C
Sbjct: 721 CQPGYTGPRCEECAPGHF---GDPLRPGGRCQPCECSSNIDPMDPEACDRQTGQCLRCLH 777
Query: 80 GVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNT-PN-----CDSVKGQCESAQLSS 132
G +C C + +Y C+ C CN G+ ++ P+ CD GQC
Sbjct: 778 NSEGPRCAHCRLGYYGQAAHQSCRRCTCNFLGTERSQCPSQDKCRCDPGSGQCPC----- 832
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDL---RRCKRDTYPLGHGGSLNLQCNS-EGRCQCKP 188
L ++ D W+L + C+ + H S + CN G+C C+
Sbjct: 833 -------LPNIQGQSCDRCAPNFWNLASGQGCQPCSCHPSHATSPS--CNEFTGQCHCRA 883
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G G C C NH+ C++C+C+ G TP C G C C+ V G +C
Sbjct: 884 GFGGRTCTECQENHWGDPGLQCRACDCDSRGI--ETPQCHHATGHCVCRPGVAGVRC 938
>gi|395511709|ref|XP_003760096.1| PREDICTED: laminin subunit alpha-1 [Sarcophilus harrisii]
Length = 3087
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 72/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKELYNR------TGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + +R GH GG C++C + G NCE C D YY+
Sbjct: 335 CNCHNKTKDCYYDQSVADRKKSMNTAGHFKGGGVCVNCLQNTAGINCETCIDGYYRPHKV 394
Query: 51 ----DNFCTACNCNPIGSLNLQC------------NSEGRCQCKPGVTGDKCDRCDVNHY 94
+N C CNC+P GSLN C N G+CQC+ G TG+KCDRC +
Sbjct: 395 SPYENNPCLPCNCDPFGSLNSVCIKDDRQSDQLNGNWPGQCQCREGYTGEKCDRCQFGYK 454
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
G C C C+ AGSV + P
Sbjct: 455 --GYPNCFRCNCSLAGSVNDDP 474
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 103/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ +GP+CE+C + +Y GD C AC+C+ SL+ C+ E G C+CK
Sbjct: 876 GECLKCIGNTEGPHCERCAEGFY---GDALVAKNCRACSCHGSSSLSSVCHHETGLCKCK 932
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CD+C Y GC C C+ GSV + NC S +GQC
Sbjct: 933 PNVMGQHCDQCLDGFYGLNTGLGCLPCNCSQLGSV--SENC-SDEGQCYCVP-------- 981
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC Y G C+ E G C C P
Sbjct: 982 -----------GVAGQRC---DRCAHGFYAYQDGSCTPCNCPHTQNTCDPESGECICPPH 1027
Query: 190 VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ ++ E GCK+C C+ GS + CD GQC C++ G C
Sbjct: 1028 SQGLKCESCEDGYWGRDPELGCKACNCSSIGSTSH--QCDLSTGQCSCREKYGGQSC 1082
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 103/243 (42%), Gaps = 62/243 (25%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ + G +C++C D +Y + C CNC+ +GS++ C+ EG+C C PGV G +CDR
Sbjct: 931 CKPNVMGQHCDQCLDGFYGLNTGLGCLPCNCSQLGSVSENCSDEGQCYCVPGVAGQRCDR 990
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-----------ESAQLSSRGRVH 137
C Y + + C C C +NT CD G+C ES + GR
Sbjct: 991 CAHGFYAYQDGSCTPCNC---PHTQNT--CDPESGECICPPHSQGLKCESCEDGYWGR-- 1043
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-------HGGSLNLQCN-SEGRCQCKPG 189
DP LG GS + QC+ S G+C C+
Sbjct: 1044 -----------DPE----------------LGCKACNCSSIGSTSHQCDLSTGQCSCREK 1076
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEG 242
G C+ C + D+ + C SC+C +G+ T + C+ G C CK+NV G
Sbjct: 1077 YGGQSCNECALGFRDYPD--CVSCDCEISGTKGETCDEKQGVCSCEEESGTCFCKENVFG 1134
Query: 243 AQC 245
C
Sbjct: 1135 LHC 1137
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C G CE C D Y+ + + C ACNC+ IGS + QC+ S G+C C+
Sbjct: 1020 GECI-CPPHSQGLKCESCEDGYWGRDPELGCKACNCSSIGSTSHQCDLSTGQCSCREKYG 1078
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C+ C + D+ + C SC+C +G+ T CD +G C
Sbjct: 1079 GQSCNECALGFRDYPD--CVSCDCEISGTKGET--CDEKQGVC 1117
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 6 FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPI 62
FS+ C + E + C C +G CEKC +Y K G + C C+C+P
Sbjct: 1469 FSSTCVLEGE------NDFRCNACSLGYEGQYCEKCSSGFYGNPIKLGGS-CQPCDCDPN 1521
Query: 63 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 121
GS++ CN+ G+C CKPGVTG C+ C+ H E+ C SC+ G + N + D++
Sbjct: 1522 GSVHSFCNTTSGQCICKPGVTGHACNECEPRHI-LVESKCVSCDDECVGVLLN--DLDNI 1578
Query: 122 KGQCESAQLS 131
S L+
Sbjct: 1579 TDAISSVNLT 1588
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS++ C+ EG+C C PGV G +CDRC Y + + C C C +NT CD
Sbjct: 965 GSVSENCSDEGQCYCVPGVAGQRCDRCAHGFYAYQDGSCTPCNC---PHTQNT--CDPES 1019
Query: 232 GQCECKDNVEGAQCRS 247
G+C C + +G +C S
Sbjct: 1020 GECICPPHSQGLKCES 1035
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
L N G+CQC+ G TG+KCDRC + G C C C+ AGSV + P + C
Sbjct: 427 LNGNWPGQCQCREGYTGEKCDRCQFGYK--GYPNCFRCNCSLAGSVNDDPCTEP----CL 480
Query: 236 CKDNVEGAQC 245
CK+NVEG +C
Sbjct: 481 CKENVEGEEC 490
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 98/239 (41%), Gaps = 30/239 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLN-------LQCNSEG 73
G CL C+ + G +C++C +Y + C C C + N L E
Sbjct: 763 GVCLTCKHNTAGAHCDQCSPGFYGNPSRGTSEDCQRCACPLTTASNNFSPTCHLDDGDEV 822
Query: 74 RC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C QC+PG TG C+RC +Y C C+CN +CD+V G+C
Sbjct: 823 ICDQCQPGYTGMWCERCADGYYGNPTVPGETCVPCDCNSNVDPLEVDHCDTVTGECLKCI 882
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC--NSEGRCQCK 187
++ G H E + + F + R C HG S + G C+CK
Sbjct: 883 GNTEGP-HCE---RCAEGFYGDALVAKNCRACS------CHGSSSLSSVCHHETGLCKCK 932
Query: 188 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P V G CD+C Y GC C C+ GSV + NC S +GQC C V G +C
Sbjct: 933 PNVMGQHCDQCLDGFYGLNTGLGCLPCNCSQLGSV--SENC-SDEGQCYCVPGVAGQRC 988
>gi|62006048|dbj|BAC97967.3| mKIAA0533 protein [Mus musculus]
Length = 1702
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 56/206 (27%), Positives = 80/206 (38%), Gaps = 39/206 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C C+G S+RC G C+ CQ + +G CE+CR + N + C
Sbjct: 107 CQCHGHSDRCL---------PGSGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSC 157
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCD 119
P N C + G +CDRC ++ F + GC+ C C PA C
Sbjct: 158 PCPLAVPSNNFADGCVLRNG----RCDRCLEGYFGFEQCQGCRPCACGPAA---KGSECH 210
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCKRDTYPLGHGGSLNLQ 177
GQC H + + + A W L + C+R P GH
Sbjct: 211 PQSGQC-----------HCQPGTTGPQCLECAPG-YWGLPEKGCRRCQCPRGH------- 251
Query: 178 CNSE-GRCQCKPGVTGDKCDRCDVNH 202
C+ G C C PG++G++CD C H
Sbjct: 252 CDPHTGHCTCPPGLSGERCDTCSQQH 277
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 84/226 (37%), Gaps = 40/226 (17%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC-QCKPGVTGD 84
C + G +C++C YY+ + F C C C+ G + G C C+ GD
Sbjct: 76 CPANYRGDSCQECAPGYYRDTKGLFLGRCVPCQCH--GHSDRCLPGSGICVGCQHNTEGD 133
Query: 85 KCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPN-CDSVKGQCESAQLSSRGRVHTE 139
+C+RC + C SC C A N + C G+C+ G +
Sbjct: 134 QCERCRPGFVSSDPSNPASPCVSCPCPLAVPSNNFADGCVLRNGRCDRCLEGYFGFEQCQ 193
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
R C P G + Q G+C C+PG TG +C C
Sbjct: 194 -----------------GCRPCA--CGPAAKGSECHPQ---SGQCHCQPGTTGPQCLECA 231
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ E GC+ C+C P G +CD G C C + G +C
Sbjct: 232 PGYWGLPEKGCRRCQC-PRG------HCDPHTGHCTCPPGLSGERC 270
>gi|307193128|gb|EFN76045.1| Laminin subunit alpha-1 [Harpegnathos saltator]
Length = 2285
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ G C +C+ Y+ + C CNC+ +GS N+ C+S G+C CKPGV G +CD
Sbjct: 83 CKPQVVGRQCNECKIGYWGLASGTGCATCNCDTMGSRNVSCHSNTGQCYCKPGVGGSRCD 142
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
C HY F GC+ C+ C G + CD G+C L+ +
Sbjct: 143 TCLSGHYGFSANGCQLCDPCVRPGHM-----CDPDTGRCVCPSLT------------YGE 185
Query: 147 NFDPAGNRIWDL------RRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
+ D WDL R C G+ QC+ +G+C C+ G G +C+RC
Sbjct: 186 HCDRCRPGAWDLVPRVGCRPCACTL------GATRPQCDHQGQCPCRIGYDGLRCERCAK 239
Query: 201 NHYDFGEAGCKSCECNPAGSVK---NTPNCDSVKGQCECKDNVEGAQC 245
+Y G C+ C CN AG+ + CD KGQC CK+ G QC
Sbjct: 240 GYY--GYPRCRPCSCNAAGTTQCQDGICGCDD-KGQCPCKELAVGRQC 284
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 65/134 (48%), Gaps = 19/134 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S+ C D+E G+CLDC+ G +C+ C D++Y C C C
Sbjct: 580 CQCNGRSDVC--DRE-------TGYCLDCREYTIGAHCDVCMDSFYGHPEFGGCRPCPCP 630
Query: 61 PI-----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSV 112
+ + ++ E C CKPG TG KC+RC +Y D + C C CN AGSV
Sbjct: 631 QVDKRFSSTCVIRMGIEPICHCKPGYTGRKCERCSYGYYGLPDLPDGKCVPCNCNLAGSV 690
Query: 113 KNTPNCDSVKGQCE 126
+ CD GQC+
Sbjct: 691 SDA--CDGETGQCK 702
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
++ E C CKPG TG KC+RC +Y D + C C CN AGSV + CD G
Sbjct: 642 IRMGIEPICHCKPGYTGRKCERCSYGYYGLPDLPDGKCVPCNCNLAGSVSDA--CDGETG 699
Query: 233 QCECKDNVEGAQC 245
QC+C+ G C
Sbjct: 700 QCKCRPGSTGRDC 712
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ G CE+C YY D C CNCN GS++ C+ E G+C+C+PG TG
Sbjct: 652 CKPGYTGRKCERCSYGYYGLPDLPDGKCVPCNCNLAGSVSDACDGETGQCKCRPGSTGRD 711
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C C + + C +C+ N G + NT S + ++ ++
Sbjct: 712 CSECTAYRHVYINDVCTTCDDNCTGILLNTVEMMSARLAADTNDIA 757
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-----CNSEGRCQ 76
H G C C+ DG CE+C YY G C C+CN G+ Q C+ +G+C
Sbjct: 219 HQGQC-PCRIGYDGLRCERCAKGYY---GYPRCRPCSCNAAGTTQCQDGICGCDDKGQCP 274
Query: 77 CKPGVTGDKCDRCDVNHYDFG---EAGCKSCEC 106
CK G +CD+C + GC C C
Sbjct: 275 CKELAVGRQCDQCKEGTFGLAADNARGCTECFC 307
>gi|431915873|gb|ELK16127.1| Laminin subunit beta-3 [Pteropus alecto]
Length = 1197
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 120/272 (44%), Gaps = 50/272 (18%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ HGG C +C+ +G NCE+C+ +Y++
Sbjct: 378 CDCNGHSETCHFDPAVFATSQGAHGGVCDNCRDHTEGKNCERCQQHYFRNRRPGAPIQEA 437
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ + C+ G+C CK V G++CD C A GC C+C+
Sbjct: 438 CIPCECDPDGAVPGVPCDPVTGQCVCKEHVQGERCDLCKPGFTGLSSANPQGCHRCDCSV 497
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
GS ++ P CD G+C L D W L
Sbjct: 498 LGSQQDMP-CDEESGRCLC------------LPHVVGPKCDQCAPYHWKLAS-------- 536
Query: 169 GHG---------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH---YDFGEAG--CKSC 213
G G SL+ QCN G+C C+ G G C+ + +G+AG C++C
Sbjct: 537 GRGCEPCACDPNNSLSPQCNQFTGQCPCREGFGGLMCNAAAIRQCPDRTYGDAGTGCRAC 596
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+ G+ P CD G+C C+ + G +C
Sbjct: 597 DCDFRGT--EGPGCDKTSGRCLCRPGLTGPRC 626
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 40/193 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + S N C C+C+ +GS ++ C+ E GRC C P
Sbjct: 459 GQCV-CKEHVQGERCDLCKPGFTGLSSANPQGCHRCDCSVLGSQQDMPCDEESGRCLCLP 517
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C H+ GC+ C C+P S+ +P C+ GQC
Sbjct: 518 HVVGPKCDQCAPYHWKLASGRGCEPCACDPNNSL--SPQCNQFTGQCPC----------- 564
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------------SEGRCQ 185
R+ F +R+C TY G G+ C+ + GRC
Sbjct: 565 ------REGFGGLMCNAAAIRQCPDRTY--GDAGTGCRACDCDFRGTEGPGCDKTSGRCL 616
Query: 186 CKPGVTGDKCDRC 198
C+PG+TG +CD+C
Sbjct: 617 CRPGLTGPRCDQC 629
>gi|313239954|emb|CBY32317.1| unnamed protein product [Oikopleura dioica]
Length = 3305
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C D G +CEKC ++ + + C +C CN GS N G CQCKP V G
Sbjct: 1835 GTCLACVNDTAGKHCEKCAPFFFGNAIEKTCESCVCNICGSQGCD-NIFGDCQCKPNVIG 1893
Query: 84 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+ CD+C +DF GCK+C C+P GS+ + CD + GQC
Sbjct: 1894 ETCDKCADGFWDFDSCHITGCKTCACHPEGSLSDV--CDKLTGQCTCK------------ 1939
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG------SLNLQCNSE-GRCQCKPGVTGD 193
G +C+ Y L G L C+S+ GRC+C PGV G
Sbjct: 1940 ----------PGVEGLSCDKCQEGHYDLTSTGCKSCNCPAGLPCDSQTGRCECPPGVIGA 1989
Query: 194 KCDRCD 199
+CD+C+
Sbjct: 1990 QCDQCE 1995
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 82/187 (43%), Gaps = 47/187 (25%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C+CKP V G C RC+V +Y++ C+ C C V NT CD G+C
Sbjct: 1297 GQCECKPNVIGRDCSRCEVGYYNW--PNCRKCNC-----VGNTV-CDENTGEC------- 1341
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL-QCNSEG--------- 182
PA N D C+ D Y H L CN+EG
Sbjct: 1342 ---------------LCPA-NTSEDCLSCQNDAYGYHHITGCKLCNCNAEGTIGASESCD 1385
Query: 183 ----RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+C C P +TG CDRC +Y F CK CEC+ G++ + CD G C+CKD
Sbjct: 1386 DHNGQCACLPSITGKSCDRCLPGYYGF--PNCKKCECDERGTIGDNNQCDVKTGACQCKD 1443
Query: 239 NVEGAQC 245
NVEG C
Sbjct: 1444 NVEGTSC 1450
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 104/237 (43%), Gaps = 48/237 (20%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCN---PIGSLNLQCNSE-GRC-QCKPG 80
+CQ GP CEKC ++ + + C C+CN + + +QC+ + G C C
Sbjct: 1784 NCQYGYTGPACEKCDAGFFGRPNMINQECKKCDCNGNSDMSTGKVQCDDQDGTCLACVND 1843
Query: 81 VTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
G C++C + FG E C+SC CN GS CD++ G C
Sbjct: 1844 TAGKHCEKC--APFFFGNAIEKTCESCVCNICGS----QGCDNIFGDC------------ 1885
Query: 138 TELRVQSRKNF-----DPAGNRIWDLRRCKRD---TYPLGHGGSLNLQCNS-EGRCQCKP 188
Q + N D + WD C T GSL+ C+ G+C CKP
Sbjct: 1886 -----QCKPNVIGETCDKCADGFWDFDSCHITGCKTCACHPEGSLSDVCDKLTGQCTCKP 1940
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GV G CD+C HYD GCKSC C PAG CDS G+CEC V GAQC
Sbjct: 1941 GVEGLSCDKCQEGHYDLTSTGCKSCNC-PAGL-----PCDSQTGRCECPPGVIGAQC 1991
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 96/253 (37%), Gaps = 77/253 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+ ++RC++D+ + R G GG C+DC+ G NCE+C + +Y+
Sbjct: 345 CNCHQHADRCYYDENV-ERNGLSVSAEGIYEGGGVCVDCKHHTTGINCERCENGFYRNPA 403
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
+ C C+C P + C+ + G C+CK G C+ C +F E C C
Sbjct: 404 ADIIDVGACLECDC-PSNYTDTTCDHDTGACKCKEKYAGHLCNSCAEGFMNFPE--CDPC 460
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
C AG T GQC +S
Sbjct: 461 PCFYAG----TKATQDASGQCRPDDIS--------------------------------- 483
Query: 165 TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
G C CK TG CD+C ++F + SCEC+ G+ +
Sbjct: 484 -----------------GTCSCKENYTGPMCDQCADGFFNFPDC-IPSCECDLNGA--ES 523
Query: 225 PNCDSVKGQCECK 237
CD V GQC+C+
Sbjct: 524 GYCDKVTGQCQCR 536
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCKPGVT 82
CL CQ D G Y+ +G C CNCN G++ + G+C C P +T
Sbjct: 1351 CLSCQNDAYG---------YHHITG---CKLCNCNAEGTIGASESCDDHNGQCACLPSIT 1398
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G CDRC +Y F CK CEC+ G++ + CD G C+
Sbjct: 1399 GKSCDRCLPGYYGF--PNCKKCECDERGTIGDNNQCDVKTGACQ 1440
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 105/242 (43%), Gaps = 48/242 (19%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNS-EGRCQCK-----P 79
C+ + GP C++C D ++ NF +C C+ G+ + C+ G+CQC+
Sbjct: 488 CKENYTGPMCDQCADGFF-----NFPDCIPSCECDLNGAESGYCDKVTGQCQCRQTDGLA 542
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS------R 133
TG +CD C + ++F + C+SC C+P G N D K C + +
Sbjct: 543 QTTGRRCDSCALGFFNFPK--CESCPCHPDG----IANPD--KAYCSFFETGTCTCKRAT 594
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCK 187
G ++ E N+ W+L+ D + G + +S+G+C CK
Sbjct: 595 GGMYCE----------QCLNKHWNLQGTNPDGCEECGCFRAGLLNEIKDCASSDGQCSCK 644
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNT-PNCDSVKGQCECKDNVEGA 243
V KC +C Y E GC C C+ G+ C++ GQC CKD+V+G
Sbjct: 645 NHVCTRKCSKCLDGFYGLEEKDYFGCVPCSCDVGGTQGGALAQCEANNGQCTCKDHVKGR 704
Query: 244 QC 245
+C
Sbjct: 705 RC 706
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKP 79
+GG C +C+ + G +C +C YY C CNC +G N C+ G C C P
Sbjct: 1294 AYGGQC-ECKPNVIGRDCSRCEVGYYNWPN---CRKCNC--VG--NTVCDENTGECLC-P 1344
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
T + C C + Y + GCK C CN G++ + +CD GQC
Sbjct: 1345 ANTSEDCLSCQNDAYGYHHITGCKLCNCNAEGTIGASESCDDHNGQCAC----------- 1393
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
L + K+ D + CK+ + G G N QC+ + G CQCK V G C
Sbjct: 1394 -LPSITGKSCDRCLPGYYGFPNCKKCECDERGTIGDNN-QCDVKTGACQCKDNVEGTSCS 1451
Query: 197 RCDVNHYDFGE---AGCKSCECN 216
RC + AGC SC C+
Sbjct: 1452 RCKAGSFFLDSQNPAGCISCFCS 1474
>gi|344237018|gb|EGV93121.1| Laminin subunit beta-1 [Cricetulus griseus]
Length = 1617
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN 58
CNCN S+ C FD ++ TG+ GG C DCQ + G NCE+C+ YYQ +
Sbjct: 188 CNCNEHSSSCHFDMAVFLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDVRDPNL 247
Query: 59 CNPIGSLNLQCN---------SEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
C P C+ G+C+CK V G++CD C Y GCKSC C
Sbjct: 248 CEPGSENGGICDGYTDFSAGLIAGQCRCKLHVEGERCDVCKEGFYGLSAEDPFGCKSCAC 307
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
NP G++ CDS G C +L + R Q N + R C D
Sbjct: 308 NPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-----QCLPQHWGLSNDLDGCRPCDCDL- 361
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
GG+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 362 ----GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 395
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C + G NC++C N +Q + C +CNCN S CN G+CQC PG
Sbjct: 883 GQCL-CLPNVIGQNCDQCAPNTWQLASGTGCESCNCNAAHSFGPSCNEFTGQCQCMPGFG 941
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C C + + C++C+C+P G TP CD GQC
Sbjct: 942 GRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQC 982
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 597 PMTDVCRNIIFSISAMIHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRACNRCAPG 656
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK C+C+ GSV CD+V GQC
Sbjct: 657 TFGFGPNGCKPCDCDLQGSVDAF--CDAVTGQC 687
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEGRC 75
G CL C +G +C+ C+ YY + C C CN +G++ CN + G+C
Sbjct: 826 GRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVQEHCNGSDCHCDKATGQC 885
Query: 76 QCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CD+C N + GC+SC CN A S P+C+ GQC+ G
Sbjct: 886 LCLPNVIGQNCDQCAPNTWQLASGTGCESCNCNAAHSFG--PSCNEFTGQCQCMP-GFGG 942
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E ++ F G+ + R C D G QC+ S G+C C GV G
Sbjct: 943 RTCSE----CQELF--WGDPDVECRACDCDPR-----GIETPQCDQSTGQCVCVEGVEGP 991
Query: 194 KCDRC 198
+CD+C
Sbjct: 992 RCDKC 996
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 105/306 (34%), Gaps = 87/306 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG + C G CL CQ G NCE+C YY
Sbjct: 714 CQCNGHAEDC---------DTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPC 764
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQC-------------------------------N 70
SG F +C +PI +L L C
Sbjct: 765 PCPDGPNSGRQFARSCYQDPI-TLQLACVCDPGYIDFGGSCQPCQCHHNIDTTDPEACDK 823
Query: 71 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPN-----CDSVKG 123
GRC +C GD C C +Y D C+ C CN G+V+ N CD G
Sbjct: 824 ETGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVQEHCNGSDCHCDKATG 883
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR---CKRDTYPLGHGGSLNLQCNS 180
QC L +N D W L C+ H S CN
Sbjct: 884 QCLC------------LPNVIGQNCDQCAPNTWQLASGTGCESCNCNAAH--SFGPSCNE 929
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+CQC PG G C C + + C++C+C+P G TP CD GQC C +
Sbjct: 930 FTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEG 987
Query: 240 VEGAQC 245
VEG +C
Sbjct: 988 VEGPRC 993
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GSV CD+V
Sbjct: 626 GSLSSVCDPNGGQCQCRPNVVGRACNRCAPGTFGFGPNGCKPCDCDLQGSVDAF--CDAV 683
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 684 TGQCHCFQGIYARQC 698
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G++CD C Y GCKSC CNP G++ CDS G C CK
Sbjct: 271 GQCRCKLHVEGERCDVCKEGFYGLSAEDPFGCKSCACNPLGTIPGGNPCDSETGYCYCKR 330
Query: 239 NVEGAQC 245
V G +C
Sbjct: 331 LVTGQRC 337
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS++ C++ G+C C G+
Sbjct: 636 GGQC-QCRPNVVGRACNRCAPGTF-GFGPNGCKPCDCDLQGSVDAFCDAVTGQCHCFQGI 693
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
+CDRC H+ F C+ C+CN + +CD+V G+C S Q + G
Sbjct: 694 YARQCDRCLPGHWGF--PSCQPCQCN-----GHAEDCDTVTGECLSCQDYTTG 739
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 104/253 (41%), Gaps = 45/253 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------QKSGDNFCTACNCNPIGS---------LNL 67
GHC+ C+ + G NCE C D Y+ + N C CNCN S L
Sbjct: 149 GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLAT 207
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS------ 120
S G C C+ G C++C +Y E + GS +N CD
Sbjct: 208 GNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDVRDPNLCEPGS-ENGGICDGYTDFSA 266
Query: 121 --VKGQCESAQLSSRGRVHTELR---VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
+ GQC R ++H E V + + + + C + PLG N
Sbjct: 267 GLIAGQC-------RCKLHVEGERCDVCKEGFYGLSAEDPFGCKSCACN--PLGTIPGGN 317
Query: 176 LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKG 232
C+SE G C CK VTG +CD+C H+ GC+ C+C+ G++ N+ C G
Sbjct: 318 -PCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNS--CSEDSG 374
Query: 233 QCECKDNVEGAQC 245
QC C ++ G QC
Sbjct: 375 QCSCLPHMIGRQC 387
>gi|324500023|gb|ADY40025.1| Laminin subunit beta-1 [Ascaris suum]
Length = 1790
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 112/255 (43%), Gaps = 60/255 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNCNG + RC FD+ +Y +G GG C +C + G NCE+C+ YY+ +
Sbjct: 343 CNCNGHAARCHFDRAVYQASGFVSGGVCDECMHNTQGKNCEQCKPFYYRNPQRPITDPYV 402
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C C C+ GSLN + EG + G+ KC C+ N G
Sbjct: 403 CLPCECDKAGSLN-EGICEGEEDPERGLVAGKC----------------YCKSNVDG--- 442
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
P CD K S LS+ DP G R CK + LG
Sbjct: 443 --PRCDHCKNGFWS--LSAE---------------DPNG-----CRACK--CHLLGTFN- 475
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSV 230
N CN G C CK VTG+ CDRC HY E GC++C+C+ G++ N CD +
Sbjct: 476 -NEGCNKRTGECLCKRLVTGENCDRCLPEHYGLSEEPDGCRACDCDIGGALDNY--CDVI 532
Query: 231 KGQCECKDNVEGAQC 245
GQC+C+ + G +C
Sbjct: 533 TGQCKCRAHFSGRRC 547
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 38/242 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTACNCNPIGSLN----------LQCN 70
G C++C+ DG C++C+D YY + G N C C C G L+ L+ N
Sbjct: 885 GACIECRDLTDGYYCDRCKDGYYGDPRLGINLPCKPCPCP--GGLDSGFQHADTCYLRPN 942
Query: 71 SEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVK 122
++ C CK G TG++C C +NH+ + E G C+ C+CN + +CD+V
Sbjct: 943 TDSESPDVVCNCKAGYTGERCASCAINHWGNPNELGGTCERCDCNGNIDLSVEGSCDAVT 1002
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSE 181
G C ++ G + E ++ F A +R C+R LG ++
Sbjct: 1003 GDCIKCLHNTEG-IQCENCIEGY--FGDA-----KIRSCQRCVCNELGTNLTVGACDRVS 1054
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSV---KNTP--NCDSVKGQCE 235
G+C C P V G +CD C H+D GC+ C C+P G + NTP C+ G+C
Sbjct: 1055 GQCACLPNVVGQQCDTCAPQHFDLASGTGCEPCNCDPNGVLLREDNTPELQCNEFDGRCP 1114
Query: 236 CK 237
CK
Sbjct: 1115 CK 1116
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+P GS++ C ++G +C CKP V G +CDRC V Y FG +GC +CEC+ GS+ N
Sbjct: 776 CNCDPTGSVSGICAAKGGQCDCKPNVVGRRCDRCAVGTYGFGPSGCTACECDSVGSLSNI 835
Query: 116 PNCDSVKGQC 125
CD GQC
Sbjct: 836 --CDKQSGQC 843
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 31/243 (12%)
Query: 20 TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCK 78
GG C DC+ + G C++C Y G + CTAC C+ +GSL+ C+ + G+C C+
Sbjct: 789 AAKGGQC-DCKPNVVGRRCDRCAVGTY-GFGPSGCTACECDSVGSLSNICDKQSGQCLCR 846
Query: 79 P-GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
G+TG +C++C + F + C+ C+CN S+ CD G C + + G
Sbjct: 847 ERGITGRQCNQCQPGFWSFPD--CRVCQCNDHASI-----CDQKTGACIECRDLTDGYYC 899
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG------HGGSLNLQCNSEGR-----CQC 186
R + DP R+ CK P G H + L+ N++ C C
Sbjct: 900 D--RCKDGYYGDP---RLGINLPCKPCPCPGGLDSGFQHADTCYLRPNTDSESPDVVCNC 954
Query: 187 KPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEG 242
K G TG++C C +NH+ + E G C+ C+CN + +CD+V G C +C N EG
Sbjct: 955 KAGYTGERCASCAINHWGNPNELGGTCERCDCNGNIDLSVEGSCDAVTGDCIKCLHNTEG 1014
Query: 243 AQC 245
QC
Sbjct: 1015 IQC 1017
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 87/229 (37%), Gaps = 65/229 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----EGRCQCKP 79
G C+ C + +G CE C + Y+ + C C CN +G+ NL + G+C C P
Sbjct: 1003 GDCIKCLHNTEGIQCENCIEGYFGDAKIRSCQRCVCNELGT-NLTVGACDRVSGQCACLP 1061
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G +CD C H+D GC+ C C+P G
Sbjct: 1062 NVVGQQCDTCAPQHFDLASGTGCEPCNCDPNG---------------------------- 1093
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
V R++ P LQCN +GRC CK G G C
Sbjct: 1094 ---VLLREDNTP------------------------ELQCNEFDGRCPCKRGRGGRTCSD 1126
Query: 198 CDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ ++ AG CK C+C+P GS + C G C C GA C
Sbjct: 1127 CEDYYWGDPMAGECKRCQCDPIGSA--SQQCHRNNGTCTCLPGSGGALC 1173
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ R G C C D Y+ C C C+PIGS + QC+ + G C C PG G C+
Sbjct: 1115 CKRGRGGRTCSDCEDYYWGDPMAGECKRCQCDPIGSASQQCHRNNGTCTCLPGSGGALCN 1174
Query: 88 RC 89
C
Sbjct: 1175 EC 1176
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 175 NLQCNSEGRC--------QCKPGVTGDKCDRCDVNHYDFGEAGCKSCE---CNPAGSVKN 223
N+ + EG C +C G +C+ C + Y FG+A +SC+ CN G+
Sbjct: 989 NIDLSVEGSCDAVTGDCIKCLHNTEGIQCENC-IEGY-FGDAKIRSCQRCVCNELGTNLT 1046
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD V GQC C NV G QC
Sbjct: 1047 VGACDRVSGQCACLPNVVGQQC 1068
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G CL C+ G NC++C +Y S + + C AC+C+ G+L+ C+ G+C+C+
Sbjct: 484 GECL-CKRLVTGENCDRCLPEHYGLSEEPDGCRACDCDIGGALDNYCDVITGQCKCRAHF 542
Query: 82 TGDKCDRCDVNHY 94
+G +CD D ++Y
Sbjct: 543 SGRRCDTADSSYY 555
>gi|2183225|gb|AAB60881.1| netrin-2 [Danio rerio]
Length = 244
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ S
Sbjct: 100 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRKA 159
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC N Y + C P
Sbjct: 160 CKACDCHPVGAAGQTCNQTTGQCPCKDGVTGITCNRC-ANGYQQSRSPIAPCIKIPIAPP 218
Query: 113 KNTPNCDSVKGQCESAQLSSRGRV 136
T + CES +S+G++
Sbjct: 219 TTTASSTEEPSDCESYCKASKGKL 242
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG ++RC D++ G +C+ + GP C++C+ +Y + N
Sbjct: 44 CKCNGHASRCVKDRD-------GNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANE 96
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D +
Sbjct: 97 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISH 156
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 157 RKACKACDCHPVGAAGQT--CNQTTGQC 182
>gi|355568240|gb|EHH24521.1| Netrin-1, partial [Macaca mulatta]
Length = 581
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 318 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPISHRKA 377
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 378 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 436
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
T + C+S +S+G++ ++ +K++
Sbjct: 437 TTTASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 472
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 262 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 314
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 315 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPISH 374
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 375 RKACKACDCHPVGAAGKT--CNQTTGQC 400
>gi|334325895|ref|XP_001369892.2| PREDICTED: laminin subunit alpha-1 [Monodelphis domestica]
Length = 2995
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 70/138 (50%), Gaps = 26/138 (18%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + N G GG C++CQ + G NCE C D YY+
Sbjct: 318 CNCHNKTKDCYYDQSVADQKKSMNLAGEFKGGGVCINCQQNTAGINCETCADGYYRPHNV 377
Query: 51 ---DNF-CTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
D + C CNC+P GSL+ C E G+CQCK G TG KCDRC + D+
Sbjct: 378 SPRDEYPCQPCNCDPWGSLSSICTKEDDLWNDGKCFGQCQCKEGYTGQKCDRCQFGYKDY 437
Query: 97 GEAGCKSCECNPAGSVKN 114
C C CN AGS+ +
Sbjct: 438 PR--CSQCTCNEAGSISD 453
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 106/237 (44%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ G +CE+C D Y+ GD C+AC C+ GS++ CN E G C CK
Sbjct: 857 GECLKCIGNTGGRHCERCADGYH---GDAVVAKNCSACWCHETGSVSNICNYETGVCNCK 913
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CD+C ++D GC+ C C+ +GSV + NCD +G+C+
Sbjct: 914 PNVIGQHCDQCANGYFDLKTGVGCQPCNCHKSGSV--SENCDD-EGKCQCVP-------- 962
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG + +C R Y G C+SE G C C P
Sbjct: 963 -----------GVAGQKC---DQCARGFYNYQDGSCTPCDCEHTQNSCDSESGECICPPN 1008
Query: 190 VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C+ H+ + GCK C C+ GS + CD GQC CK G +C
Sbjct: 1009 TKGLHCEDCEDEHWGHDPDIGCKPCNCSNKGSTSH--RCDLESGQCLCKKEYAGKKC 1063
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 30/227 (13%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G +C++C + Y+ C CNC+ GS++ C+ EG+CQC PGV G KCD
Sbjct: 911 NCKPNVIGQHCDQCANGYFDLKTGVGCQPCNCHKSGSVSENCDDEGKCQCVPGVAGQKCD 970
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQCESAQLSSRGRVHTELRVQSRK 146
+C Y++ + C C+C ++T N CDS G+C +++G +H E
Sbjct: 971 QCARGFYNYQDGSCTPCDC------EHTQNSCDSESGECICPP-NTKG-LHCEDCEDEHW 1022
Query: 147 NFDPAGNRIWDL--RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
DP D+ + C + GS + +C+ E G+C CK G KC+ C
Sbjct: 1023 GHDP------DIGCKPCN-----CSNKGSTSHRCDLESGQCLCKKEYAGKKCNECAFGFR 1071
Query: 204 DFGEAGCKSCECNPAGSVKNTPN-----CDSVKGQCECKDNVEGAQC 245
D+ + C C C+ +G+ ++T + C+ G C CK+NV G C
Sbjct: 1072 DYPD--CVPCNCDGSGTREDTCDGKVCSCEKRTGFCTCKENVFGLHC 1116
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 118/262 (45%), Gaps = 40/262 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C G C+DC+ + G NC++C +Y + C C
Sbjct: 731 CECNGHASDCDIH----------GVCIDCKDNTTGENCDQCLPGFYGNASQGTPADCQPC 780
Query: 58 NCNPIGSLN-------LQCNSEGRC-QCKPGVTGDKCDRCDVNHYD----FGEAGCKSCE 105
C S N L E C +C+ G G++C+RC +Y FGE+ C C+
Sbjct: 781 KCPLSSSSNNFSPTCSLNNEDEVICDKCQTGYIGNQCERCADGYYGNPTVFGES-CIPCD 839
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
CN + NCD+V G+C ++ GR H E R + D + C
Sbjct: 840 CNDNVDPLESDNCDTVTGECLKCIGNTGGR-HCE-RCADGYHGDAVVAKNCSACWCHET- 896
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
GS++ CN E G C CKP V G CD+C ++D GC+ C C+ +GSV
Sbjct: 897 ------GSVSNICNYETGVCNCKPNVIGQHCDQCANGYFDLKTGVGCQPCNCHKSGSV-- 948
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ NCD +G+C+C V G +C
Sbjct: 949 SENCDD-EGKCQCVPGVAGQKC 969
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 14/120 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C +GP CEKC YY G+ F C ACNC+P GS++ CN+ G+C CKPGV+
Sbjct: 1467 CAPGYEGPYCEKCGSGYY---GNPFLIGGSCQACNCDPNGSVHGLCNTTSGQCICKPGVS 1523
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C + H + C SC+ G + N D+V +Q++ G +H +
Sbjct: 1524 GRACDKCKLRHV-LVDLECVSCDDECVGVLLNV--LDNVTDAI--SQMNFTGIIHVPYEI 1578
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCK G TG KCDRC + D+ C C CN AGS+ + CD C CK+NVE
Sbjct: 414 GQCQCKEGYTGQKCDRCQFGYKDYPR--CSQCTCNEAGSISDL--CDE---PCLCKENVE 466
Query: 242 GAQC 245
G C
Sbjct: 467 GDNC 470
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNC-NPIGSLNLQCN----SEGRC- 75
G CL+C+ + G +C+ C YY K N C+ C C S + C+ ++ RC
Sbjct: 1406 GQCLNCRDNTAGDHCDICAPGYYGKVRGSVNDCSVCECPRSNASFSPTCHLVDENDFRCD 1465
Query: 76 QCKPGVTGDKCDRCDVNHY--DFGEAG-CKSCECNPAGSVKNTPNCDSVKGQC 125
C PG G C++C +Y F G C++C C+P GSV C++ GQC
Sbjct: 1466 ACAPGYEGPYCEKCGSGYYGNPFLIGGSCQACNCDPNGSVHGL--CNTTSGQC 1516
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C PG G C++C +Y F G C++C C+P GSV C++ GQC CK V G
Sbjct: 1467 CAPGYEGPYCEKCGSGYYGNPFLIGGSCQACNCDPNGSVHGL--CNTTSGQCICKPGVSG 1524
Query: 243 AQC 245
C
Sbjct: 1525 RAC 1527
>gi|260800033|ref|XP_002594941.1| hypothetical protein BRAFLDRAFT_244565 [Branchiostoma floridae]
gi|229280179|gb|EEN50952.1| hypothetical protein BRAFLDRAFT_244565 [Branchiostoma floridae]
Length = 598
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 15/121 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CN ++ C FD ++ T GG C DCQ + G C +CR YYQ K+
Sbjct: 320 CECNSHADSCHFDLNVWRATNGKTGGVCDDCQHNTMGRRCHRCRPGYYQDPTRDKAHPQI 379
Query: 54 CTACNCNPIGSLN-----LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCE 105
C C C+P+G+++ CN GRC+CK GVTG +CDRC N++ FG+ GC+ C
Sbjct: 380 CKRCECDPVGTVDGVSGKRPCNMVTGRCKCKNGVTGTRCDRCRPNYWGFGKIRNGCQKCN 439
Query: 106 C 106
C
Sbjct: 440 C 440
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 76/214 (35%), Gaps = 83/214 (38%)
Query: 29 CQGDRDGPNCEKCRDNY---YQKSGD------NFCTACNCNPIGS-----LNLQCNSEGR 74
C+ + G NCE+C Y K G+ N C C CN LN+ + G+
Sbjct: 283 CRHNTAGVNCERCAPLYNNQPWKPGNGRTGKKNMCEKCECNSHADSCHFDLNVWRATNGK 342
Query: 75 C-----QCKPGVTGDKCDRCDVNHYD------FGEAGCKSCECNPAGSVKNTPNCDSVKG 123
C+ G +C RC +Y CK CEC+P G+V D V G
Sbjct: 343 TGGVCDDCQHNTMGRRCHRCRPGYYQDPTRDKAHPQICKRCECDPVGTV------DGVSG 396
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
+ R C T GR
Sbjct: 397 K----------------------------------RPCNMVT----------------GR 406
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCEC 215
C+CK GVTG +CDRC N++ FG+ GC+ C C
Sbjct: 407 CKCKNGVTGTRCDRCRPNYWGFGKIRNGCQKCNC 440
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 186 CKPGVTGDKCDRCDVNHYD------FGEAGCKSCECNPAGSVKNTPN---CDSVKGQCEC 236
C+ G +C RC +Y CK CEC+P G+V C+ V G+C+C
Sbjct: 350 CQHNTMGRRCHRCRPGYYQDPTRDKAHPQICKRCECDPVGTVDGVSGKRPCNMVTGRCKC 409
Query: 237 KDNVEGAQC 245
K+ V G +C
Sbjct: 410 KNGVTGTRC 418
>gi|397486158|ref|XP_003814198.1| PREDICTED: usherin [Pan paniscus]
Length = 5202
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + N+Y + ++F C CNC+ G++N L C+ S G+C CK
Sbjct: 813 GQCI-CKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCDKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHTCNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASIAGQRCDQCRDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 111/233 (47%), Gaps = 34/233 (14%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ + G C++C + + D+ C C CN GS+N CN G+C+CK G +
Sbjct: 717 CKANVIGLRCDRCNFGFKFLRSFNDDGCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y CK+C+C+ AGS+ T C++ GQC V+ R
Sbjct: 777 CDTCRENFYGLDVTSCKACDCDTAGSLPGT-VCNAKTGQCICKP-----------NVEGR 824
Query: 146 K-------NFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKC 195
+ NF N + C D G++N L C+ S G+C CK GVTG +C
Sbjct: 825 QCNKCLEGNFYLRQNNSFLCLPCNCD-----KTGTINGSLLCDKSTGQCPCKLGVTGLRC 879
Query: 196 DRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C+ + Y+ C+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 880 NQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 931
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y G A GC C C+ G+V +T C+S+ GQC S G+ + R
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHT--CNSLTGQCVCQDASIAGQRCDQCR- 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK V+G +C++C Y+ E GC C CN +G+V C GQC+CK
Sbjct: 660 GQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNISGTVDGDITCHQNSGQCKCKA 719
Query: 239 NVEGAQC 245
NV G +C
Sbjct: 720 NVIGLRC 726
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++CRD+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCVCQDASIAGQRCDQCRDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1026 FVTGSKCDACVPSASHLD 1043
>gi|149018527|gb|EDL77168.1| laminin, beta 2 [Rattus norvegicus]
Length = 1801
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 111/265 (41%), Gaps = 79/265 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG S+ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 350 CECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPAA 409
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C+C+P+GS + +C+S G+C+CK V G +C +C + +
Sbjct: 410 CRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSAS---- 465
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
NP G C+ Q +SRG V P G
Sbjct: 466 ---NPRG--------------CQRCQCNSRGTV-------------PGGT---------- 485
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGS 220
C+S G C CK VTGD CDRC H+ GC+ C+C+ G+
Sbjct: 486 -------------PCDSSSGTCFCKRLVTGDGCDRCLPGHWGLSHDLLGCRPCDCDVGGA 532
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ P CD GQC C+ ++ G +C
Sbjct: 533 LD--PQCDEATGQCRCRPHMIGRRC 555
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +CN G +C+CKPGV G +CD C +Y FG AGC++C+C+P G
Sbjct: 781 NGALPCQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDG 840
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 841 ALSAL--CEGTSGQC 853
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C +GP+C C+ ++ ++ C C CN +G+ +C S
Sbjct: 1006 HTGQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGTDPQRCPSTDLCHCDPST 1065
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CDRC N ++F GC+ C C+P S P C+ GQC
Sbjct: 1066 GQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQPCACHP--SRARGPTCNEFTGQCH-CHAG 1122
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D G QC+ S G C C+PGV
Sbjct: 1123 FGGRTCSE--CQELHWGDPG----LQCRACDCDPR-----GIDKPQCHRSTGHCSCRPGV 1171
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1172 SGVRCDQC 1179
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ +CN G +C+CKPGV G +CD C +Y FG AGC++C+C+P G++ C+
Sbjct: 792 GSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDGALSAL--CEGT 849
Query: 231 KGQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 850 SGQCLCRTGAFGLRC 864
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 97/243 (39%), Gaps = 40/243 (16%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ G C+ C YY G C AC C+P G+L+ C + G+C C+ G
Sbjct: 801 HGGQC-RCKPGVVGRRCDACATGYY-GFGPAGCQACQCSPDGALSALCEGTSGQCLCRTG 858
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR----- 135
G +CD C + F C+ C CN CD+ G C + + G
Sbjct: 859 AFGLRCDHCQRGQWGF--PNCRPCVCN-----GRADECDAHTGACLGCRDYTGGEHCERC 911
Query: 136 ---VHTELRVQSRKNFDP------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
H + R+ P G++ C RD Y + + C C
Sbjct: 912 IAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHRDGY------------SQQIVCHC 959
Query: 187 KPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEG 242
+ G TG +C+ C H+ D + G C+ CEC+ + CD GQC C + EG
Sbjct: 960 RAGYTGLRCEACAPGHFGDPSKPGGRCQLCECSGNIDPTDPGACDPHTGQCLRCLHHTEG 1019
Query: 243 AQC 245
C
Sbjct: 1020 PHC 1022
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 109/274 (39%), Gaps = 54/274 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 880 CVCNGRADEC---------DAHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPC 930
Query: 58 NCNPIGS-----LNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P G C+ +G C C+ G TG +C+ C H+ D + G C+ C
Sbjct: 931 PC-PEGPGSQRHFATSCHRDGYSQQIVCHCRAGYTGLRCEACAPGHFGDPSKPGGRCQLC 989
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQS--RKNFDPAGNR 154
EC+ + CD GQC + G H + QS R + G
Sbjct: 990 ECSGNIDPTDPGACDPHTGQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGT- 1048
Query: 155 IWDLRRCKRDTYPLGHGGSLNL-QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
D +RC S +L C+ S G+C C P V G CDRC N ++F GC+
Sbjct: 1049 --DPQRCP----------STDLCHCDPSTGQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQ 1096
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S P C+ GQC C G C
Sbjct: 1097 PCACHP--SRARGPTCNEFTGQCHCHAGFGGRTC 1128
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C G G C C H+ C++C+C+P G K P C G C C+ V
Sbjct: 1115 GQCHCHAGFGGRTCSECQELHWGDPGLQCRACDCDPRGIDK--PQCHRSTGHCSCRPGVS 1172
Query: 242 GAQC 245
G +C
Sbjct: 1173 GVRC 1176
>gi|410985513|ref|XP_003999066.1| PREDICTED: netrin-3 [Felis catus]
Length = 475
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC F ++ C
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG---FQQSRSPVAPCVKTPVP 427
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNFD 149
T SV+ Q C+ +RG L+ RK++D
Sbjct: 428 GPTEESSSVEPQDCDVHCKPARGSYRISLKKFCRKDYD 465
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 34/149 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DCQ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDTQ--------GHLICDCQHGTEGPDCGRCKPFYCDRPWQRATAREAH 306
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 366
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 367 DRRACRACDCHPVGAAGKT--CNQTTGQC 393
>gi|395749706|ref|XP_002828100.2| PREDICTED: laminin subunit alpha-1 [Pongo abelii]
Length = 2383
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D K+ N G GG C++C + G NCE C D YY+
Sbjct: 322 CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETCIDGYYRPHKV 381
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C CNC+P+GSL+ C + G+C CK G G+KCDRC + +
Sbjct: 382 SPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLHNGKWPGQCPCKEGYAGEKCDRCQLGYK 441
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
D+ C SC CNPAGS + P
Sbjct: 442 DY--PTCVSCGCNPAGSASDEP 461
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G+KCDRC + + D+ C SC CNPAGS + P C G C CK+NVE
Sbjct: 420 GQCPCKEGYAGEKCDRCQLGYKDY--PTCVSCGCNPAGSASDEP-C---TGPCVCKENVE 473
Query: 242 GAQC 245
G C
Sbjct: 474 GKAC 477
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H C C +G +CE+C YY Q G + C C+CNP GS++ C+ + G+C C
Sbjct: 913 HNFRCDACLLGYEGKHCERCSSGYYGNPQTPGGS-CQKCDCNPHGSVHGDCDRTSGQCVC 971
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ G +G +CD C+ H E C SC+
Sbjct: 972 RLGASGLRCDECEPRHI-LMETDCVSCD 998
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C+CN S+ C D G CL+C + G +C+ C YY K + C C
Sbjct: 844 CSCNNHSDTCDPDT---------GKCLNCGDNTAGDHCDVCASGYYGKVTGSASDCAPCA 894
Query: 59 C--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C +P S + C EG RC C G G C+RC +Y + C+ C+CNP
Sbjct: 895 CPHSPPASFSPTCVLEGDHNFRCDACLLGYEGKHCERCSSGYYGNPQTPGGSCQKCDCNP 954
Query: 109 AGSVKNTPNCDSVKGQC 125
GSV +CD GQC
Sbjct: 955 HGSVHG--DCDRTSGQC 969
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C G G C+RC +Y + C+ C+CNP GSV +CD GQC C+ G
Sbjct: 920 CLLGYEGKHCERCSSGYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTSGQCVCRLGASG 977
Query: 243 AQC 245
+C
Sbjct: 978 LRC 980
>gi|189235268|ref|XP_972827.2| PREDICTED: similar to laminin A chain, putative [Tribolium castaneum]
Length = 4228
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 108/260 (41%), Gaps = 74/260 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTACNCN-PIGSLNLQ----CNSEGR- 74
G CL+C + G +CE C Y+ +G C C C P+GS N +++G
Sbjct: 1806 GICLNCTHNTRGDHCELCEVGYHGNALAGTPMDCLICACPLPVGSNNFATACDVSADGEK 1865
Query: 75 --CQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+CK G G +C C Y E+ CK C+C+ + + +CD+V G+C
Sbjct: 1866 ISCECKEGYFGARCQSCAAGFYGRPESLGDFCKPCQCSGNINPDDPSSCDTVSGEC---- 1921
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--------PLGHGGSLNLQ---- 177
RC +TY P G ++NL+
Sbjct: 1922 -----------------------------LRCLNNTYGKACALCAPGYFGDAVNLKDCQS 1952
Query: 178 ----------CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
CNS G C CKP V G+KCDRC+V HY F AGC C+C A ++
Sbjct: 1953 CICDELGTDHCNSFTGECVCKPNVIGEKCDRCEVKHYGFQTGAGCVPCDCAEAS---DSS 2009
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD V GQC CK V G C
Sbjct: 2010 QCDDVTGQCRCKPGVSGRSC 2029
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C + G C++C Y++ C C C+ GS+ + C+ EG+C+C G +CD
Sbjct: 606 CSTNYGGKTCDQCNPGYFKYPE---CLPCECDSHGSIGVSCDGEGKCECHHNFAGLRCDS 662
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQS 144
C Y+F C+ C C+PAG V C SV QC+ GR+ + R
Sbjct: 663 CREGFYNF--PACEDCNCHPAGVVAGFAGCGSVPAGELCQCKE---RVEGRICNKCR-PL 716
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
N P N CK + + G ++ C+SE G C CK V G C C Y
Sbjct: 717 YWNLSP--NNPQGCEECKCNISGVLGGIAV---CDSESGECVCKSLVMGRGCTECVDGTY 771
Query: 204 DFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ E GC C+C+ GSV N CD GQC C V+G C+
Sbjct: 772 NLQEENLFGCTDCDCDVGGSVNNI--CDKATGQCLCHSRVKGRTCK 815
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 111/266 (41%), Gaps = 45/266 (16%)
Query: 1 CNCNGFSNRCFFDKE---------LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC SN C +D+E ++ R GG CL+CQ + DG NC KC+ +Y+ G
Sbjct: 333 CNCFQHSNECVYDEEVDRKGLSLDIHGRYAGGGVCLNCQHNTDGINCNKCKPTFYRPFGK 392
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C CNCN S G+C+CK CD C + FG C+ CEC
Sbjct: 393 FENDTDACQPCNCNHFYSTGNCAEGSGQCECKKQFQPPNCDSCSFGY--FGYPNCRPCEC 450
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF----DPAGNRIWDLRRCK 162
G+ C++ GQC L + G F P D + C+
Sbjct: 451 FLNGT--KDLQCEARNGQCPC--LYNYG-----------GQFCGECAPGYYSFPDCKHCE 495
Query: 163 RDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+ GS+ C E G C CK G +CD C +Y++ C C C+ G+
Sbjct: 496 CNP-----EGSVTNACEQESGNCTCKNNFGGKRCDECQHGYYNY--PTCDYCNCDIKGTK 548
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCRS 247
+ CD GQC CK+ G +C S
Sbjct: 549 EGI--CDKTTGQCMCKEGYTGDRCDS 572
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 94/210 (44%), Gaps = 51/210 (24%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C Y+ GD C +C C+ +G+ + CNS G C CK
Sbjct: 1919 GECLRCLNNTYGKACALCAPGYF---GDAVNLKDCQSCICDELGTDH--CNSFTGECVCK 1973
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRV 136
P V G+KCDRC+V HY F AGC C+C A ++ CD V GQC +S R
Sbjct: 1974 PNVIGEKCDRCEVKHYGFQTGAGCVPCDCAEAS---DSSQCDDVTGQCRCKPGVSGR--- 2027
Query: 137 HTELRVQSRKNFDPAGNR----IWDLRR-------CKRDTYPLGHGGSLNLQCNS-EGRC 184
+ NR W+ CK + Y LG G CN+ G+C
Sbjct: 2028 --------------SCNRCSAGFWNYTTDGCVSCGCKSE-YSLGFG------CNALTGQC 2066
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
+C GV G+KCD+C + GC C+
Sbjct: 2067 ECLQGVVGEKCDQCPHRWVFVPDYGCHQCD 2096
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 41/235 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ G C+ C YY G C CNC+ +GS+ C++ G+C C G
Sbjct: 557 GQCM-CKEGYTGDRCDSCLAGYY---GYPDCKPCNCSKVGSVGFSCSATGKCSCSTNYGG 612
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
CD+C+ ++ + E C CEC+ GS+ + CD +G+CE
Sbjct: 613 KTCDQCNPGYFKYPE--CLPCECDSHGSIGVS--CDG-EGKCE----------------- 650
Query: 144 SRKNFDPAGNR-------IWDLRRCKR-DTYPLGHGGSLN--LQCNSEGRCQCKPGVTGD 193
NF AG R ++ C+ + +P G + CQCK V G
Sbjct: 651 CHHNF--AGLRCDSCREGFYNFPACEDCNCHPAGVVAGFAGCGSVPAGELCQCKERVEGR 708
Query: 194 KCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C++C +++ GC+ C+CN +G + CDS G+C CK V G C
Sbjct: 709 ICNKCRPLYWNLSPNNPQGCEECKCNISGVLGGIAVCDSESGECVCKSLVMGRGC 763
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 41 CRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
C+D+ + + ++ C C+ GSL+ +C+ G +C+CKP + G KC+ C + FG
Sbjct: 1344 CKDSVFSITAGHNSGALPCGCDFAGSLSFECDKFGGQCRCKPNIIGRKCEACKTGY--FG 1401
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQC--ESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
CK C C + C+ GQC + R L +DP I
Sbjct: 1402 FPDCKPCNC------PSIAFCEPTTGQCICPPHVVGERCDQCEPLTY----GYDP----I 1447
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
CK + LG G+ N+ G C CKP V G +CD+C HY F C+ C C
Sbjct: 1448 IGCEECKCNI--LGIEGTEQCDLNN-GSCHCKPNVVGRQCDKCLAGHYAF--PYCEFCSC 1502
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ G+ CD +C CK NV G C
Sbjct: 1503 DYRGTTSEI--CDQATAECFCKKNVVGPTCE 1531
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 96/221 (43%), Gaps = 29/221 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C + G C +C YY C C CNP GS+ C E G C CK G +CD
Sbjct: 469 CLYNYGGQFCGECAPGYYSFPD---CKHCECNPEGSVTNACEQESGNCTCKNNFGGKRCD 525
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
C +Y++ C C C+ G+ + CD GQC + + R + L
Sbjct: 526 ECQHGYYNY--PTCDYCNCDIKGTKEGI--CDKTTGQCMCKEGYTGDRCDSCL------- 574
Query: 148 FDPAGNRIW-DLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 206
AG + D + C GS+ C++ G+C C G CD+C+ ++ +
Sbjct: 575 ---AGYYGYPDCKPCN-----CSKVGSVGFSCSATGKCSCSTNYGGKTCDQCNPGYFKYP 626
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
E C CEC+ GS+ + CD +G+CEC N G +C S
Sbjct: 627 E--CLPCECDSHGSIGVS--CDG-EGKCECHHNFAGLRCDS 662
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+CKPGV+G C+RC +++ GC SC C S+ C+++ GQCEC V
Sbjct: 2016 GQCRCKPGVSGRSCNRCSAGFWNYTTDGCVSCGCKSEYSLGF--GCNALTGQCECLQGVV 2073
Query: 242 GAQC 245
G +C
Sbjct: 2074 GEKC 2077
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL-QCN-SEGRCQCKPGV 81
G C+ C G C++C Y C C CN +G QC+ + G C CKP V
Sbjct: 1421 GQCI-CPPHVVGERCDQCEPLTYGYDPIIGCEECKCNILGIEGTEQCDLNNGSCHCKPNV 1479
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +CD+C HY F C+ C C+ G+ CD +C
Sbjct: 1480 VGRQCDKCLAGHYAF--PYCEFCSCDYRGTTSEI--CDQATAEC 1519
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 78/185 (42%), Gaps = 21/185 (11%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN--LQCNSEG---RCQCKPGVT 82
+C + G C+ CR+ +Y C CNC+P G + C S CQCK V
Sbjct: 650 ECHHNFAGLRCDSCREGFYNFPA---CEDCNCHPAGVVAGFAGCGSVPAGELCQCKERVE 706
Query: 83 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C++C +++ GC+ C+CN +G + CDS G+C L GR TE
Sbjct: 707 GRICNKCRPLYWNLSPNNPQGCEECKCNISGVLGGIAVCDSESGECVCKSLV-MGRGCTE 765
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
++ ++ C D GGS+N C+ + G+C C V G C
Sbjct: 766 C---VDGTYNLQEENLFGCTDCDCDV-----GGSVNNICDKATGQCLCHSRVKGRTCKEP 817
Query: 199 DVNHY 203
HY
Sbjct: 818 LETHY 822
>gi|6981142|ref|NP_037106.1| laminin subunit beta-2 precursor [Rattus norvegicus]
gi|126371|sp|P15800.1|LAMB2_RAT RecName: Full=Laminin subunit beta-2; AltName: Full=Laminin chain
B3; AltName: Full=Laminin-11 subunit beta; AltName:
Full=Laminin-14 subunit beta; AltName: Full=Laminin-15
subunit beta; AltName: Full=Laminin-3 subunit beta;
AltName: Full=Laminin-4 subunit beta; AltName:
Full=Laminin-7 subunit beta; AltName: Full=Laminin-9
subunit beta; AltName: Full=S-laminin subunit beta;
Short=S-LAM beta; Flags: Precursor
gi|57251|emb|CAA34561.1| precursor (AA -35 to 1766) [Rattus norvegicus]
Length = 1801
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 111/265 (41%), Gaps = 79/265 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG S+ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 350 CECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPAA 409
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C+C+P+GS + +C+S G+C+CK V G +C +C + +
Sbjct: 410 CRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSAS---- 465
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
NP G C+ Q +SRG V P G
Sbjct: 466 ---NPRG--------------CQRCQCNSRGTV-------------PGGT---------- 485
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGS 220
C+S G C CK VTGD CDRC H+ GC+ C+C+ G+
Sbjct: 486 -------------PCDSSSGTCFCKRLVTGDGCDRCLPGHWGLSHDLLGCRPCDCDVGGA 532
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ P CD GQC C+ ++ G +C
Sbjct: 533 LD--PQCDEATGQCPCRPHMIGRRC 555
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +CN G +C+CKPGV G +CD C +Y FG AGC++C+C+P G
Sbjct: 781 NGALPCQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDG 840
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 841 ALSAL--CEGTSGQC 853
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C +GP+C C+ ++ ++ C C CN +G+ +C S
Sbjct: 1006 HTGQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGTDPQRCPSTDLCHCDPST 1065
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CDRC N ++F GC+ C C+P S P C+ GQC
Sbjct: 1066 GQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQPCACHP--SRARGPTCNEFTGQCH-CHAG 1122
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D G QC+ S G C C+PGV
Sbjct: 1123 FGGRTCSE--CQELHWGDPG----LQCRACDCDPR-----GIDKPQCHRSTGHCSCRPGV 1171
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1172 SGVRCDQC 1179
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ +CN G +C+CKPGV G +CD C +Y FG AGC++C+C+P G++ C+
Sbjct: 792 GSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDGALSAL--CEGT 849
Query: 231 KGQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 850 SGQCLCRTGAFGLRC 864
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 97/243 (39%), Gaps = 40/243 (16%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ G C+ C YY G C AC C+P G+L+ C + G+C C+ G
Sbjct: 801 HGGQC-RCKPGVVGRRCDACATGYY-GFGPAGCQACQCSPDGALSALCEGTSGQCLCRTG 858
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR----- 135
G +CD C + F C+ C CN CD+ G C + + G
Sbjct: 859 AFGLRCDHCQRGQWGF--PNCRPCVCN-----GRADECDAHTGACLGCRDYTGGEHCERC 911
Query: 136 ---VHTELRVQSRKNFDP------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
H + R+ P G++ C RD Y + + C C
Sbjct: 912 IAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHRDGY------------SQQIVCHC 959
Query: 187 KPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEG 242
+ G TG +C+ C H+ D + G C+ CEC+ + CD GQC C + EG
Sbjct: 960 RAGYTGLRCEACAPGHFGDPSKPGGRCQLCECSGNIDPTDPGACDPHTGQCLRCLHHTEG 1019
Query: 243 AQC 245
C
Sbjct: 1020 PHC 1022
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 109/274 (39%), Gaps = 54/274 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 880 CVCNGRADEC---------DAHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPC 930
Query: 58 NCNPIGS-----LNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P G C+ +G C C+ G TG +C+ C H+ D + G C+ C
Sbjct: 931 PC-PEGPGSQRHFATSCHRDGYSQQIVCHCRAGYTGLRCEACAPGHFGDPSKPGGRCQLC 989
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQS--RKNFDPAGNR 154
EC+ + CD GQC + G H + QS R + G
Sbjct: 990 ECSGNIDPTDPGACDPHTGQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGT- 1048
Query: 155 IWDLRRCKRDTYPLGHGGSLNL-QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
D +RC S +L C+ S G+C C P V G CDRC N ++F GC+
Sbjct: 1049 --DPQRCP----------STDLCHCDPSTGQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQ 1096
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S P C+ GQC C G C
Sbjct: 1097 PCACHP--SRARGPTCNEFTGQCHCHAGFGGRTC 1128
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C G G C C H+ C++C+C+P G K P C G C C+ V
Sbjct: 1115 GQCHCHAGFGGRTCSECQELHWGDPGLQCRACDCDPRGIDK--PQCHRSTGHCSCRPGVS 1172
Query: 242 GAQC 245
G +C
Sbjct: 1173 GVRC 1176
>gi|226290|prf||1505373A laminin-like adhesive protein
Length = 1801
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 111/265 (41%), Gaps = 79/265 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG S+ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 350 CECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPAA 409
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C+C+P+GS + +C+S G+C+CK V G +C +C + +
Sbjct: 410 CRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSAS---- 465
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
NP G C+ Q +SRG V P G
Sbjct: 466 ---NPRG--------------CQRCQCNSRGTV-------------PGGT---------- 485
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGS 220
C+S G C CK VTGD CDRC H+ GC+ C+C+ G+
Sbjct: 486 -------------PCDSSSGTCFCKRLVTGDGCDRCLPGHWGLSHDLLGCRPCDCDVGGA 532
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ P CD GQC C+ ++ G +C
Sbjct: 533 LD--PQCDEATGQCPCRPHMIGRRC 555
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +CN G +C+CKPGV G +CD C +Y FG AGC++C+C+P G
Sbjct: 781 NGALPCQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDG 840
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 841 ALSAL--CEGTSGQC 853
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C +GP+C C+ ++ ++ C C CN +G+ +C S
Sbjct: 1006 HTGQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGTDPQRCPSTDLCHCDPST 1065
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CDRC N ++F GC+ C C+P S P C+ GQC
Sbjct: 1066 GQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQPCACHP--SRARGPTCNEFTGQCH-CHAG 1122
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D G QC+ S G C C+PGV
Sbjct: 1123 FGGRTCSE--CQELHWGDPG----LQCRACDCDPR-----GIDKPQCHRSTGHCSCRPGV 1171
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1172 SGVRCDQC 1179
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ +CN G +C+CKPGV G +CD C +Y FG AGC++C+C+P G++ C+
Sbjct: 792 GSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDGALSAL--CEGT 849
Query: 231 KGQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 850 SGQCLCRTGAFGLRC 864
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 97/243 (39%), Gaps = 40/243 (16%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ G C+ C YY G C AC C+P G+L+ C + G+C C+ G
Sbjct: 801 HGGQC-RCKPGVVGRRCDACATGYY-GFGPAGCQACQCSPDGALSALCEGTSGQCLCRTG 858
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR----- 135
G +CD C + F C+ C CN CD+ G C + + G
Sbjct: 859 AFGLRCDHCQRGQWGF--PNCRPCVCN-----GRADECDAHTGACLGCRDYTGGEHCERC 911
Query: 136 ---VHTELRVQSRKNFDP------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
H + R+ P G++ C RD Y + + C C
Sbjct: 912 IAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHRDGY------------SQQIVCHC 959
Query: 187 KPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEG 242
+ G TG +C+ C H+ D + G C+ CEC+ + CD GQC C + EG
Sbjct: 960 RAGYTGLRCEACAPGHFGDPSKPGGRCQLCECSGNIDPTDPGACDPHTGQCLRCLHHTEG 1019
Query: 243 AQC 245
C
Sbjct: 1020 PHC 1022
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 109/274 (39%), Gaps = 54/274 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 880 CVCNGRADEC---------DAHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPC 930
Query: 58 NCNPIGS-----LNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P G C+ +G C C+ G TG +C+ C H+ D + G C+ C
Sbjct: 931 PC-PEGPGSQRHFATSCHRDGYSQQIVCHCRAGYTGLRCEACAPGHFGDPSKPGGRCQLC 989
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQS--RKNFDPAGNR 154
EC+ + CD GQC + G H + QS R + G
Sbjct: 990 ECSGNIDPTDPGACDPHTGQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGT- 1048
Query: 155 IWDLRRCKRDTYPLGHGGSLNL-QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
D +RC S +L C+ S G+C C P V G CDRC N ++F GC+
Sbjct: 1049 --DPQRCP----------STDLCHCDPSTGQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQ 1096
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S P C+ GQC C G C
Sbjct: 1097 PCACHP--SRARGPTCNEFTGQCHCHAGFGGRTC 1128
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C G G C C H+ C++C+C+P G K P C G C C+ V
Sbjct: 1115 GQCHCHAGFGGRTCSECQELHWGDPGLQCRACDCDPRGIDK--PQCHRSTGHCSCRPGVS 1172
Query: 242 GAQC 245
G +C
Sbjct: 1173 GVRC 1176
>gi|126336016|ref|XP_001377786.1| PREDICTED: laminin subunit beta-2 [Monodelphis domestica]
Length = 1794
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPG--- 80
G CL C +GP C CR YY ++ C C CN +G+ QC S+ +C+C PG
Sbjct: 1001 GQCLRCLHHSEGPRCAHCRPGYYGQAAHQSCRRCTCNFLGTERSQCPSQDKCRCDPGSGQ 1060
Query: 81 ------VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
+ G CDRC N ++ GC+ C C+P S +P+C+ GQC +
Sbjct: 1061 CPCLPNIQGQSCDRCAPNFWNLASGRGCQPCSCHP--SHATSPSCNEFTGQCH-CRAGFG 1117
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRCQCKPGVTG 192
GR TE Q DP R C D G QC ++ G C C+PGV G
Sbjct: 1118 GRTCTE--CQENHWGDPG----LQCRACDCDPR-----GIETPQCHHATGHCVCRPGVAG 1166
Query: 193 DKCDRC 198
+CD+C
Sbjct: 1167 VRCDQC 1172
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 55/236 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+ S C FD ++ +G+ GG C DCQ G +CE CR YY+ +
Sbjct: 345 CECHQHSRSCHFDMAVFLASGNTSGGVCDDCQHHTAGMHCEICRPFYYRDPTRDLRDPAV 404
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P G+ + + G+C+CK V G +C RC ++ G
Sbjct: 405 CRPCDCDPSGARDGGLCDPHDDPMLGLVSGQCRCKEHVVGPRCQRCRDGYFGLSTTNPQG 464
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+C+P G+V P CDS G C R+ + K+ D R
Sbjct: 465 CQRCQCDPRGTVPGGPPCDSNSGDCFCK------------RLVTGKHCD----------R 502
Query: 161 CKRDTYPLGH------------GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D + L H GG+L +C + G+C+C+ + G +CD+ ++
Sbjct: 503 CLTDHWGLSHDLLGCRPCDCDVGGALEPRCAEDSGQCRCRRHMFGRRCDQVQPGYF 558
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 103/237 (43%), Gaps = 28/237 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ + G C+ C + G + C AC C+P GS + C+ + G+C C+PG
Sbjct: 794 HGGQC-PCKANVAGRRCDHCAPGTF-GFGPSGCRACQCSPDGSFSSLCHEASGQCPCRPG 851
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CDRC + F C+ C CN ++ CD G C+ R R HT
Sbjct: 852 AFGLRCDRCQPGQWGF--PSCRPCHCN-----GHSDECDPRTGACQ------RCRDHTAG 898
Query: 141 RVQSRKNFDPAGNRIWDL-RRCKRDTYPLGHGGSLNLQC-------NSEGRCQCKPGVTG 192
R GN + C+ P G GG + + + C C+PG TG
Sbjct: 899 DNCERCTAGFYGNPVLASGGHCRPCPCPEGPGGQRHFATSCHQDRHSQQVVCHCQPGYTG 958
Query: 193 DKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+C+ C H+ D G C+ CEC+ + CD GQC C + EG +C
Sbjct: 959 PRCEECAPGHFGDPQRPGGRCQPCECSNNIDPMDPEACDRRSGQCLRCLHHSEGPRC 1015
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 108/270 (40%), Gaps = 46/270 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C+CNG S+ C G C C+ G NCE+C +Y + C C
Sbjct: 873 CHCNGHSDEC---------DPRTGACQRCRDHTAGDNCERCTAGFYGNPVLASGGHCRPC 923
Query: 58 NC--NPIGSLNLQC-------NSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCE 105
C P G + + + C C+PG TG +C+ C H+ D G C+ CE
Sbjct: 924 PCPEGPGGQRHFATSCHQDRHSQQVVCHCQPGYTGPRCEECAPGHFGDPQRPGGRCQPCE 983
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ + CD GQC S G R + A ++ RRC +
Sbjct: 984 CSNNIDPMDPEACDRRSGQCLRCLHHSEGPRCAHCRP---GYYGQAAHQ--SCRRCTCNF 1038
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPG---------VTGDKCDRCDVNHYDFGEA-GCKSCEC 215
G+ QC S+ +C+C PG + G CDRC N ++ GC+ C C
Sbjct: 1039 L-----GTERSQCPSQDKCRCDPGSGQCPCLPNIQGQSCDRCAPNFWNLASGRGCQPCSC 1093
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+P S +P+C+ GQC C+ G C
Sbjct: 1094 HP--SHATSPSCNEFTGQCHCRAGFGGRTC 1121
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N AC C+P GSL+ +C G +C CK V G +CD C + FG +GC++C+C+P G
Sbjct: 774 NGALACQCDPQGSLSSECQPHGGQCPCKANVAGRRCDHCAPGTFGFGPSGCRACQCSPDG 833
Query: 111 SVKNTPNCDSVKGQC 125
S + C GQC
Sbjct: 834 SFSSL--CHEASGQC 846
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 163 RDTYPLGHGGSLNLQCNSE-----------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
R L H G+L QC+ + G+C CK V G +CD C + FG +GC+
Sbjct: 766 RSLAALLHNGALACQCDPQGSLSSECQPHGGQCPCKANVAGRRCDHCAPGTFGFGPSGCR 825
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+C+P GS + C GQC C+ G +C
Sbjct: 826 ACQCSPDGSFSSL--CHEASGQCPCRPGAFGLRC 857
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G +C RC ++ GC+ C+C+P G+V P CDS G C CK
Sbjct: 434 GQCRCKEHVVGPRCQRCRDGYFGLSTTNPQGCQRCQCDPRGTVPGGPPCDSNSGDCFCKR 493
Query: 239 NVEGAQC 245
V G C
Sbjct: 494 LVTGKHC 500
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 25/149 (16%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
G +C+C+P GS+ + C GQC A ++ R H F P+G R
Sbjct: 775 GALACQCDPQGSLSS--ECQPHGGQCPCKANVAGRRCDHC---APGTFGFGPSGCRAC-- 827
Query: 159 RRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
+C D GS + C+ + G+C C+PG G +CDRC + F C+ C CN
Sbjct: 828 -QCSPD-------GSFSSLCHEASGQCPCRPGAFGLRCDRCQPGQWGF--PSCRPCHCN- 876
Query: 218 AGSVKNTPNCDSVKGQCE-CKDNVEGAQC 245
++ CD G C+ C+D+ G C
Sbjct: 877 ----GHSDECDPRTGACQRCRDHTAGDNC 901
>gi|431894057|gb|ELK03863.1| Netrin-1 [Pteropus alecto]
Length = 341
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 78 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 137
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 138 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 196
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 197 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 232
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C +Y D G+ CK+C+C+P G+ T C+ GQC CKD
Sbjct: 108 CRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGKT--CNQTTGQCPCKDG 165
Query: 240 VEGAQC 245
V G C
Sbjct: 166 VTGITC 171
>gi|85677493|ref|NP_001034260.1| laminin subunit alpha-5 precursor [Danio rerio]
gi|81171109|gb|ABB58781.1| laminin alpha 5 [Danio rerio]
Length = 3664
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 101/232 (43%), Gaps = 46/232 (19%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL C+ + GP C++C+ ++ C C C+P SL+ C+ +C C+P +
Sbjct: 590 AGRCL-CRPEFTGPRCDQCQSGFHSYPN---CQVCTCDPRTSLDSSCSELDQCNCRPNYS 645
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-----------ESAQLS 131
G +C +C +Y + C C+C+ GS + +CD V GQC +S
Sbjct: 646 GPRCQQCAPGYYSY--PSCTPCDCSVEGS--RSSSCDPVSGQCVCLPNIEGQRCDSCSPG 701
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT 191
S G +L +PAG+ D P + G C C+P V
Sbjct: 702 SYGFPLCQL-----GTCNPAGS-------VHNDILP------------TVGSCVCRPYVE 737
Query: 192 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C+RC +++ GC +C+CN AG++ C GQC CK NV
Sbjct: 738 GVACERCKPLYWNLSPDTIYGCSTCDCNTAGTLSEVAECTQRTGQCFCKPNV 789
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 31/229 (13%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
+C+ + GP C++C YY CT C+C+ GS + C+ G+C C P + G +C
Sbjct: 639 NCRPNYSGPRCQQCAPGYYSYPS---CTPCDCSVEGSRSSSCDPVSGQCVCLPNIEGQRC 695
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR- 145
D C Y F C+ CNPAGSV N + G C R + E R
Sbjct: 696 DSCSPGSYGF--PLCQLGTCNPAGSVHN--DILPTVGSCVC-------RPYVEGVACERC 744
Query: 146 --KNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCNSE-GRCQCKPGVTGDKCDRCDV 200
++ + + I+ C +T G+L+ +C G+C CKP V C+ C
Sbjct: 745 KPLYWNLSPDTIYGCSTCDCNT-----AGTLSEVAECTQRTGQCFCKPNVCSGTCNVCKD 799
Query: 201 NHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
++ + GC+ C+C+ GSV CD G+C C+ NVEG +C+
Sbjct: 800 GFFNLQKDSYFGCQGCQCDIGGSVGQA--CDERYGRCRCRPNVEGPKCK 846
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 118/263 (44%), Gaps = 42/263 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-SGDNFCTACNC 59
CNCNG S++C G C++C+ + G +CEKC ++ + D +C+
Sbjct: 1843 CNCNGHSDQCL---------DGSGICVNCRHNTAGNHCEKCLGGFHHNNTVDGHSVSCSS 1893
Query: 60 NP----IGSLNLQCN-----SEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
P + S N + RC C PG G KC+RC +Y + C+ C CN
Sbjct: 1894 CPCPLQVASNNFAIRCVEKPNNMRCLCMPGYAGSKCERCAPGYYGNPVVIGSTCQPCNCN 1953
Query: 108 PAGSVKNT--PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-D 164
S N +C + G+C+S ++ G H E+ G+ I + C R +
Sbjct: 1954 -GNSDPNMLFSDCHPLTGECQSCMHNTAGP-HCEICAPGFY-----GDAI-TAKNCTRCN 2005
Query: 165 TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVK 222
P G C+S G+C CKPGV G +CDRC+ + F GC+ C+C+ + ++
Sbjct: 2006 CSPCGTA-----HCDSHTGQCHCKPGVVGAQCDRCEHGTFGFDSCTGCRKCDCDASAALV 2060
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
CD V G C C+ V G C
Sbjct: 2061 QA--CDPVNGACACQPGVNGPNC 2081
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 50/210 (23%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G+ + C S G +C+C+P V G C +C +Y F C+ C C
Sbjct: 1415 NNGAVPCGCHEVGAESDTCESFGGQCRCRPNVIGRDCSQCATGYYGF--PNCRPCNCG-- 1470
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--- 166
+ C+ V G+C + + P D C+ T+
Sbjct: 1471 -----SRLCEPVTGEC----------------ICPPRTLQP------DCVTCEPQTFGCH 1503
Query: 167 PL----------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
PL S+++ C++ G+C+C+ + G +CDRC Y G C+ C C
Sbjct: 1504 PLVGCEMCNCSRPGVTSMDISCDTNNGQCRCRNNIVGRQCDRCFPGFY--GYPNCRPCNC 1561
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N AG+ N CDS G+C CK+NVEG +C
Sbjct: 1562 NEAGTEMNV--CDSFTGRCLCKENVEGPRC 1589
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 103/243 (42%), Gaps = 58/243 (23%)
Query: 29 CQGDRDGPNCEKCRDNY------YQ--------KSGDNFCTACNCNPIGSLNLQCNSEGR 74
C+ + G NC++C + Y YQ +G+N C CN G+ C + R
Sbjct: 441 CKPNYTGENCDQCAEGYEHFPECYQVLINGEVRPAGENIID-CECNAAGTEGNSCRPDPR 499
Query: 75 ---CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C CKP TG+ CD C ++ C+ C+C+ G + + CD+V GQC
Sbjct: 500 TNTCVCKPEFTGEHCDTCSHGYFSIN---CQRCQCSGQGCLDGS--CDAVTGQCVCR--- 551
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCK--RDTYPL------GHGGSLNLQCNSEGR 183
+G + + +C YPL GS+ C+ GR
Sbjct: 552 -------------------SGFQGYSCEQCAPGYFNYPLCQYCGCSVVGSIPEMCDPAGR 592
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+P TG +CD+C + + C+ C C+P S+ ++ C + QC C+ N G
Sbjct: 593 CLCRPEFTGPRCDQCQSGFHSY--PNCQVCTCDPRTSLDSS--CSELD-QCNCRPNYSGP 647
Query: 244 QCR 246
+C+
Sbjct: 648 RCQ 650
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 18/185 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-NLQCNSEGRCQCKPGVT 82
G C+ C + +G C+ C Y G C CNP GS+ N + G C C+P V
Sbjct: 682 GQCV-CLPNIEGQRCDSCSPGSY---GFPLCQLGTCNPAGSVHNDILPTVGSCVCRPYVE 737
Query: 83 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C+RC +++ GC +C+CN AG++ C GQC G +
Sbjct: 738 GVACERCKPLYWNLSPDTIYGCSTCDCNTAGTLSEVAECTQRTGQCFCKPNVCSGTCN-- 795
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
V F+ + + + C+ D GGS+ C+ GRC+C+P V G KC +
Sbjct: 796 --VCKDGFFNLQKDSYFGCQGCQCDI-----GGSVGQACDERYGRCRCRPNVEGPKCKQP 848
Query: 199 DVNHY 203
+HY
Sbjct: 849 RPDHY 853
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ G +CE+C Y+ C C C+ +GS+ C+ GRC C+P TG
Sbjct: 546 GQCV-CRSGFQGYSCEQCAPGYFNYP---LCQYCGCSVVGSIPEMCDPAGRCLCRPEFTG 601
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
+CD+C + + C+ C C+P S+ ++
Sbjct: 602 PRCDQCQSGFHSY--PNCQVCTCDPRTSLDSS 631
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 83/238 (34%), Gaps = 54/238 (22%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS----EGRCQ-CKPGV 81
C G CE+C YY + C CNCN N+ + G CQ C
Sbjct: 1920 CMPGYAGSKCERCAPGYYGNPVVIGSTCQPCNCNGNSDPNMLFSDCHPLTGECQSCMHNT 1979
Query: 82 TGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C+ C Y C C C+P G T +CDS GQC G V +
Sbjct: 1980 AGPHCEICAPGFYGDAITAKNCTRCNCSPCG----TAHCDSHTGQCHCKP----GVVGAQ 2031
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-----------GGSLNLQCNS-EGRCQCK 187
RC+ T+ +L C+ G C C+
Sbjct: 2032 CD------------------RCEHGTFGFDSCTGCRKCDCDASAALVQACDPVNGACACQ 2073
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
PGV G C +C H+++ GC+ CEC CD G+C C + G QC
Sbjct: 2074 PGVNGPNCHQCAPGHWNYSSNGCRKCECKGG-------RCDPRTGECRCTTGLTGKQC 2124
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
H G C C+ G C++C + C C+C+ +L C+ G C C+PG
Sbjct: 2017 HTGQC-HCKPGVVGAQCDRCEHGTFGFDSCTGCRKCDCDASAALVQACDPVNGACACQPG 2075
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCEC 106
V G C +C H+++ GC+ CEC
Sbjct: 2076 VNGPNCHQCAPGHWNYSSNGCRKCEC 2101
>gi|321474022|gb|EFX84988.1| hypothetical protein DAPPUDRAFT_300823 [Daphnia pulex]
Length = 1776
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 20 TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS-LNLQ----CNSE-G 73
G G CL C + +G +CE C+ ++ + CT C CN +GS +L+ CN + G
Sbjct: 989 AGKSGECLQCLFNTEGFSCEVCQKGFFGDALSQQCTPCVCNLLGSDSSLEGPSVCNRQTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
+C C P V G CDRC V+H+ GC++C C+P GS+ C+ GQCE +
Sbjct: 1049 QCPCLPNVEGLSCDRCAVDHWKIASGEGCEACSCDPVGSLST--QCNEFDGQCECRE-GF 1105
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRCQCKPGVT 191
GR + R N P+ N R C D PL GS QC ++ G C C PG+
Sbjct: 1106 GGRKCDQCRANYWGN--PSDN---SCRPCLCD--PL---GSATQQCHHATGACVCLPGMG 1155
Query: 192 GDKCDRCDVNHYDFGEAGCKSCECNPAG 219
G+KCDRC G G +C P G
Sbjct: 1156 GEKCDRC-----ARGYVGAIVPDCQPCG 1178
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 21/145 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNCN S++C FD +Y TG GG C DC + G NCE+C+ +YQ S +
Sbjct: 333 CNCNQHSDQCHFDPAVYEATGRISGGVCDDCNHNTMGRNCEQCKAFFYQDPTKAISDADV 392
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P GSL+ C++ G+C CK V G +CD+C +++F E G
Sbjct: 393 CLPCDCDPRGSLDDGICDARSDPSGGVQAGQCHCKRFVEGRRCDQCQHGYWNFTEENPDG 452
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQC 125
C+ C CN G+ +N C+ G+C
Sbjct: 453 CQVCSCNLLGTYENQ-GCNVYSGEC 476
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 39/265 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG ++ C G CLDC+ +C++C D+YY + D C AC
Sbjct: 865 CECNGHADLC---------DSRTGRCLDCRDFTTDDHCDRCLDSYYGDPRLGVDIPCRAC 915
Query: 58 NC----------NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
C P SL+ + + C+C+ G G +CD C N++ E C+ C
Sbjct: 916 PCPGTIDSGHSYAPRCSLDRE-TQDVICECQEGYAGPRCDVCADNYFGNPEVLGGQCRPC 974
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
+C+ + NC G+C ++ G V + F A ++ C
Sbjct: 975 QCSNNIDLSRPGNCAGKSGECLQCLFNTEG---FSCEVCQKGFFGDALSQQCTPCVCNL- 1030
Query: 165 TYPLGHGGSLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGS 220
LG SL CN + G+C C P V G CDRC V+H+ GC++C C+P GS
Sbjct: 1031 ---LGSDSSLEGPSVCNRQTGQCPCLPNVEGLSCDRCAVDHWKIASGEGCEACSCDPVGS 1087
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ C+ GQCEC++ G +C
Sbjct: 1088 LST--QCNEFDGQCECREGFGGRKC 1110
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 97/205 (47%), Gaps = 38/205 (18%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P GS + C+S G +C CKP V G +CD+C + FG GC CECNP GS+ N
Sbjct: 771 CQCDPTGSSSSICDSLGGQCSCKPNVVGRRCDQCAPGTFGFGPEGCSPCECNPVGSLDNF 830
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRV--QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
CDS GQC R R +T RV Q + + W+ C+R G
Sbjct: 831 --CDSGTGQC-------RCRPNTYGRVCDQCQPGY-------WNFPSCQR----CECNGH 870
Query: 174 LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN----T 224
+L + GRC C+ T D CDRC ++Y G C++C C G++ +
Sbjct: 871 ADLCDSRTGRCLDCRDFTTDDHCDRCLDSYYGDPRLGVDIPCRACPC--PGTIDSGHSYA 928
Query: 225 PNC----DSVKGQCECKDNVEGAQC 245
P C ++ CEC++ G +C
Sbjct: 929 PRCSLDRETQDVICECQEGYAGPRC 953
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 117/278 (42%), Gaps = 43/278 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-------DNF 53
C+C G ++RC + RT +C + G NCE+C D Y+ N
Sbjct: 270 CSCYGHASRCLPLPGVDERTDMVHGRCECTHNTKGLNCEQCEDFYHDLPWRPAIGRQTNA 329
Query: 54 CTACNCNPIGSLNLQCN-------SEGRCQ------CKPGVTGDKCDRCDVNHYD----- 95
C CNCN QC+ + GR C G C++C Y
Sbjct: 330 CKRCNCNQHSD---QCHFDPAVYEATGRISGGVCDDCNHNTMGRNCEQCKAFFYQDPTKA 386
Query: 96 FGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
+A C C+C+P GS+ + CD+ Q G+ H + V+ R+ D +
Sbjct: 387 ISDADVCLPCDCDPRGSLDDGI-CDARSDPSGGVQA---GQCHCKRFVEGRR-CDQCQHG 441
Query: 155 IWDLRRCKRDTYPL----GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA- 208
W+ D + G N CN G C CK VTG CD+C H+ EA
Sbjct: 442 YWNFTEENPDGCQVCSCNLLGTYENQGCNVYSGECVCKRYVTGRDCDQCLPEHWGLSEAR 501
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GCK+CEC+P GS N NCD + GQC+C+ +V G C
Sbjct: 502 DGCKACECDPGGSYDN--NCDLLTGQCKCRPHVTGRTC 537
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 166 YPLGHG--------GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
Y LG G GS + C+S G +C CKP V G +CD+C + FG GC CECN
Sbjct: 763 YVLGSGFECQCDPTGSSSSICDSLGGQCSCKPNVVGRRCDQCAPGTFGFGPEGCSPCECN 822
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P GS+ N CDS GQC C+ N G C
Sbjct: 823 PVGSLDNF--CDSGTGQCRCRPNTYGRVC 849
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNH 93
G C++CR NY+ DN C C C+P+GS QC ++ G C C PG+ G+KCDRC
Sbjct: 1107 GRKCDQCRANYWGNPSDNSCRPCLCDPLGSATQQCHHATGACVCLPGMGGEKCDRC---- 1162
Query: 94 YDFGEAGCKSCECNPAGSVKNTPN--CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G G +C P G + + ++GQ E +++ T + F+
Sbjct: 1163 -ARGYVGAIVPDCQPCGECFDNWDRILQELRGQTEQVVVAAGQIRETGATGAYTREFETM 1221
Query: 152 GNRIWDLRRCKRDTYPLGH 170
N++ D+R +T GH
Sbjct: 1222 ENKLSDVRALLLNTTLSGH 1240
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 103/234 (44%), Gaps = 24/234 (10%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C++C + G C+ C CNP+GSL+ C+S G+C+C+P
Sbjct: 787 GGQC-SCKPNVVGRRCDQCAPGTF-GFGPEGCSPCECNPVGSLDNFCDSGTGQCRCRPNT 844
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL- 140
G CD+C +++F C+ CECN + CDS G+C L R +
Sbjct: 845 YGRVCDQCQPGYWNF--PSCQRCECNGHADL-----CDSRTGRC----LDCRDFTTDDHC 893
Query: 141 -RVQSRKNFDPAGNRIWDLRRCK-RDTYPLGHGGSLNLQCNSEGR---CQCKPGVTGDKC 195
R DP R C T GH + + E + C+C+ G G +C
Sbjct: 894 DRCLDSYYGDPRLGVDIPCRACPCPGTIDSGHSYAPRCSLDRETQDVICECQEGYAGPRC 953
Query: 196 DRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
D C N++ E C+ C+C+ + NC G+C +C N EG C
Sbjct: 954 DVCADNYFGNPEVLGGQCRPCQCSNNIDLSRPGNCAGKSGECLQCLFNTEGFSC 1007
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 104/267 (38%), Gaps = 57/267 (21%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNP 61
+ ++ RC D+E + +CQ GP C+ C DNY+ + C C C+
Sbjct: 925 HSYAPRCSLDRETQDVI------CECQEGYAGPRCDVCADNYFGNPEVLGGQCRPCQCSN 978
Query: 62 IGSLNLQCNSEGR----CQCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGS---VK 113
L+ N G+ QC G C+ C + D C C CN GS ++
Sbjct: 979 NIDLSRPGNCAGKSGECLQCLFNTEGFSCEVCQKGFFGDALSQQCTPCVCNLLGSDSSLE 1038
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR--RCKRDTYPLGHG 171
C+ GQC P + L RC D + + G
Sbjct: 1039 GPSVCNRQTGQC------------------------PCLPNVEGLSCDRCAVDHWKIASG 1074
Query: 172 -----------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPA 218
GSL+ QCN +G+C+C+ G G KCD+C N++ + + C+ C C+P
Sbjct: 1075 EGCEACSCDPVGSLSTQCNEFDGQCECREGFGGRKCDQCRANYWGNPSDNSCRPCLCDPL 1134
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS T C G C C + G +C
Sbjct: 1135 GSA--TQQCHHATGACVCLPGMGGEKC 1159
>gi|363730920|ref|XP_426078.3| PREDICTED: laminin subunit alpha-3 [Gallus gallus]
Length = 3364
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 105/247 (42%), Gaps = 59/247 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ--------------------KSGDNFCTACNCNPIG 63
G C C+ + G NCE C D +Y +GD T C CN +G
Sbjct: 438 GRCF-CKWNFQGENCEHCADGFYSFPFCIHIPVYPFTSPNPRDAIAGD--ITVCECNSVG 494
Query: 64 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 123
+ C+ GRC C+ GV G +CD C H+ F C++C+C+P GS + C+ G
Sbjct: 495 TQPEVCDFLGRCLCRSGVVGLQCDSCQPGHHSF--PVCEACQCSPLGSRHSI--CEPTTG 550
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS--- 180
QCE Q + GR Q + A N +P G +N +CN
Sbjct: 551 QCE-CQTNVTGR-------QCDRCISAAPN------------FPYCEG--INSECNPSGS 588
Query: 181 ----EGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQ 233
G CQC V G C +C +++ E GC +C+C+ +G++ C G+
Sbjct: 589 VDSHSGYCQCLQHVEGPTCSKCKPLYWNLAEENPEGCTACQCDVSGTLSGVGECQQETGR 648
Query: 234 CECKDNV 240
C CK NV
Sbjct: 649 CYCKSNV 655
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 90/218 (41%), Gaps = 65/218 (29%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN-- 107
+N CNC+ GS++ C+ G +C C+P V G +C RC +Y F CK C C
Sbjct: 1290 NNGAVPCNCHSEGSMSPTCSPLGGQCICRPNVIGRQCSRCQTGYYGF--PSCKLCNCGQR 1347
Query: 108 -----------PAGSVKNTPNCDS---------VKGQCESAQLSSRGRVHTELRVQSRKN 147
P +VK P C+ CES S RG V+ R + KN
Sbjct: 1348 LCDDLTGKCICPPRTVK--PKCEVCERYYFSYHPLAGCESCNCSERGVVNAA-RPECEKN 1404
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
G+C+CKPG+ G +CDRC YDF
Sbjct: 1405 ---------------------------------NGQCKCKPGIRGRQCDRCAPGTYDF-- 1429
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+CN G+ + CD G C CK+NVEGA+C
Sbjct: 1430 PNCIPCKCNRDGTEPDV--CDPQTGICLCKENVEGAEC 1465
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 107/237 (45%), Gaps = 42/237 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ G C+ C+ ++ C AC C+P+GS + C + G+C+C+ VT
Sbjct: 504 GRCL-CRSGVVGLQCDSCQPGHHSFP---VCEACQCSPLGSRHSICEPTTGQCECQTNVT 559
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC +F + ECNP+GSV DS G C+ Q H E
Sbjct: 560 GRQCDRCISAAPNFPYCEGINSECNPSGSV------DSHSGYCQCLQ-------HVE--- 603
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLG-------HGGSLNL--QCNSE-GRCQCKPGVTG 192
P ++ L + P G G+L+ +C E GRC CK V G
Sbjct: 604 ------GPTCSKCKPLYWNLAEENPEGCTACQCDVSGTLSGVGECQQETGRCYCKSNVCG 657
Query: 193 DKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
D C+ C+ +Y GCK C+C+ GS+ C G C+C+++V G C+
Sbjct: 658 DFCNTCEAGYYALENKNYFGCKGCQCDVGGSISFA--CAEPSGACQCREHVVGKACQ 712
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL--QCNSE-GRCQ 76
H G+C C +GP C KC+ Y+ + +N CTAC C+ G+L+ +C E GRC
Sbjct: 592 HSGYC-QCLQHVEGPTCSKCKPLYWNLAEENPEGCTACQCDVSGTLSGVGECQQETGRCY 650
Query: 77 CKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSV 112
CK V GD C+ C+ +Y GCK C+C+ GS+
Sbjct: 651 CKSNVCGDFCNTCEAGYYALENKNYFGCKGCQCDVGGSI 689
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G CE C+D Y+ + C C C
Sbjct: 1719 CNCNGNSNRCH---------DGTGKCINCQYNTAGEKCELCKDGYFGDATQGSCRICPCP 1769
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
C + G +C CK G TG +C+RC ++ +G C+ C CN G +
Sbjct: 1770 YTNRFATGCVANGGEIQCLCKEGYTGVRCERCAPGYFGNPQKYG-GYCQKCNCNNNGQLA 1828
Query: 114 NTPNCDSVKGQC 125
+CD + G+C
Sbjct: 1829 ---SCDRLTGEC 1837
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 110/263 (41%), Gaps = 56/263 (21%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGD-------NFCTACNCNPIG-------------- 63
HC +CQ + G C++C Y QK N C CNC+
Sbjct: 315 HC-ECQHNTCGETCDRCCPGYNQKQWQPATAGNINICEPCNCHGHATDCYYDADVDQRRE 373
Query: 64 SLNLQCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKN 114
SLN+ + EG C+ G C++C +Y +G GC SC C+ ++
Sbjct: 374 SLNIHGHYEGGGVCINCQHNTAGVNCEKCAKGYYRPYGVPARAPDGCISCPCD----LER 429
Query: 115 TPNCDSVKGQC--------ESAQLSSRGRVH----TELRVQSRKNFDPAGNRIWDLRRCK 162
C+ G+C E+ + + G + V + +P D+ C+
Sbjct: 430 AEGCEEGSGRCFCKWNFQGENCEHCADGFYSFPFCIHIPVYPFTSPNPRDAIAGDITVCE 489
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
++ G+ C+ GRC C+ GV G +CD C H+ F C++C+C+P GS
Sbjct: 490 CNSV-----GTQPEVCDFLGRCLCRSGVVGLQCDSCQPGHHSF--PVCEACQCSPLGSRH 542
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ C+ GQCEC+ NV G QC
Sbjct: 543 SI--CEPTTGQCECQTNVTGRQC 563
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL---QCN-SEGRCQCKPGVTGDKCDRCDV 91
P CE C Y+ C +CNC+ G +N +C + G+C+CKPG+ G +CDRC
Sbjct: 1365 PKCEVCERYYFSYHPLAGCESCNCSERGVVNAARPECEKNNGQCKCKPGIRGRQCDRCAP 1424
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
YDF C C+CN G+ + CD G C
Sbjct: 1425 GTYDF--PNCIPCKCNRDGTEPDV--CDPQTGIC 1454
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN--CNPIGSLNLQCNSEGRCQCKPGVTG 83
+CQ + G C++C + NF C N CNP GS++ + G CQC V G
Sbjct: 553 ECQTNVTGRQCDRCIS-----AAPNFPYCEGINSECNPSGSVD---SHSGYCQCLQHVEG 604
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC--------ESAQLSS 132
C +C +++ E GC +C+C+ +G++ C G+C +
Sbjct: 605 PTCSKCKPLYWNLAEENPEGCTACQCDVSGTLSGVGECQQETGRCYCKSNVCGDFCNTCE 664
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRCQCKPGVT 191
G E KN+ + + C+ D GGS++ C G CQC+ V
Sbjct: 665 AGYYALE-----NKNY-------FGCKGCQCDV-----GGSISFACAEPSGACQCREHVV 707
Query: 192 GDKCDRCDVNHY 203
G C + N++
Sbjct: 708 GKACQEPEKNYF 719
>gi|345800259|ref|XP_850304.2| PREDICTED: LOW QUALITY PROTEIN: netrin-1 [Canis lupus familiaris]
Length = 604
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCRKDY 495
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
>gi|332216443|ref|XP_003257361.1| PREDICTED: laminin subunit beta-2 [Nomascus leucogenys]
Length = 1678
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 109/267 (40%), Gaps = 83/267 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+G ++ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 347 CECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPAV 406
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C +C+C+P+GS + +C+S G+C+CK V G +C +C + + G
Sbjct: 407 CRSCDCDPMGSQDGGRCDSHDDPALGLVSGQCRCKEHVVGTRCQQCRDGFFGLSISDPLG 466
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CN G+V + CD G C
Sbjct: 467 CRRCQCNARGTVPGSTPCDPNSGSC----------------------------------Y 492
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPA 218
CKR GHG CDRC H+ GC+ C+C+
Sbjct: 493 CKRLV--TGHG-----------------------CDRCLPGHWGLSHDLLGCRPCDCDVG 527
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ P CD GQC C+ ++ G +C
Sbjct: 528 GALD--PQCDEATGQCHCRQHMVGRRC 552
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C +GP+C C+ ++ ++ C C CN +G+ QC S
Sbjct: 883 HTGQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTCNLLGTNPQQCPSPDQCHCDPSS 942
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CDRC N ++ GC+ C C+P S P C+ GQC +
Sbjct: 943 GQCPCLPNVQGPSCDRCAPNFWNLTSGHGCQPCACHP--SRARGPTCNEFTGQCH-CRAG 999
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D+ G QC+ S G C C+PGV
Sbjct: 1000 FGGRTCSE--CQELHWGDPG----LQCRACDCDSR-----GIDTPQCHRSTGHCSCRPGV 1048
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1049 SGVRCDQC 1056
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 107/279 (38%), Gaps = 64/279 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C H G CL C+ G +CE+C ++
Sbjct: 757 CVCNGHADEC---------NTHTGACLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPC 807
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
S +F T+C+ + + + + C C+ G TG +C+ C H+ D G
Sbjct: 808 PCPEGPGSQRHFATSCHRD-------EYSQQIVCHCRAGYTGLRCEACAPGHFGDPSRPG 860
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR--VQSRKNFDPAGNRIW 156
C+ CEC+ + CD GQC R HTE + F R
Sbjct: 861 GRCQLCECSGNIDPMDPDACDPHTGQC------LRCLHHTEGPHCAHCKPGFHGQAAR-- 912
Query: 157 DLRRCKRDTYPLGHGGSLNLQC---------NSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
+ C R T L G+ QC S G+C C P V G CDRC N ++
Sbjct: 913 --QSCHRCTCNL--LGTNPQQCPSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPNFWNLTS 968
Query: 208 A-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P S P C+ GQC C+ G C
Sbjct: 969 GHGCQPCACHP--SRARGPTCNEFTGQCHCRAGFGGRTC 1005
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 87/225 (38%), Gaps = 38/225 (16%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE 98
K Y + G AC C+ G+L+ C + G+C C+ G G +CDRC + F
Sbjct: 694 KLSWTLYSQPGSALLLACQCSHEGALSSLCEKTSGQCLCRTGAFGLRCDRCQRGQWGF-- 751
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQSRKNFDP 150
C+ C CN + C++ G C + + G H + R+ P
Sbjct: 752 PSCRPCVCN-----GHADECNTHTGACLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRP 806
Query: 151 ------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY- 203
G++ C RD Y + + C C+ G TG +C+ C H+
Sbjct: 807 CPCPEGPGSQRHFATSCHRDEY------------SQQIVCHCRAGYTGLRCEACAPGHFG 854
Query: 204 DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
D G C+ CEC+ + CD GQC C + EG C
Sbjct: 855 DPSRPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHC 899
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ G G C C H+ C++C+C+ G +TP C G C C+ V
Sbjct: 992 GQCHCRAGFGGRTCSECQELHWGDPGLQCRACDCDSRG--IDTPQCHRSTGHCSCRPGVS 1049
Query: 242 GAQC 245
G +C
Sbjct: 1050 GVRC 1053
>gi|297578324|gb|ADI46647.1| laminin alpha 5 [Danio rerio]
Length = 3664
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 101/232 (43%), Gaps = 46/232 (19%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL C+ + GP C++C+ ++ C C C+P SL+ C+ +C C+P +
Sbjct: 590 AGRCL-CRPEFTGPRCDQCQSGFHSYPN---CQVCTCDPRTSLDSSCSELDQCNCRPNYS 645
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-----------ESAQLS 131
G +C +C +Y + C C+C+ GS + +CD V GQC +S
Sbjct: 646 GPRCQQCAPGYYSY--PSCTPCDCSVEGS--RSSSCDPVSGQCVCLPNIEGQRCDSCSPG 701
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT 191
S G +L +PAG+ D P + G C C+P V
Sbjct: 702 SYGFPLCQL-----GTCNPAGS-------VHNDILP------------TVGSCVCRPYVE 737
Query: 192 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C+RC +++ GC +C+CN AG++ C GQC CK NV
Sbjct: 738 GVACERCKPLYWNLSPDTIYGCSTCDCNTAGTLSEVAECTQRTGQCFCKPNV 789
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 31/229 (13%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
+C+ + GP C++C YY CT C+C+ GS + C+ G+C C P + G +C
Sbjct: 639 NCRPNYSGPRCQQCAPGYYSYPS---CTPCDCSVEGSRSSSCDPVSGQCVCLPNIEGQRC 695
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR- 145
D C Y F C+ CNPAGSV N + G C R + E R
Sbjct: 696 DSCSPGSYGF--PLCQLGTCNPAGSVHN--DILPTVGSCVC-------RPYVEGVACERC 744
Query: 146 --KNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCNSE-GRCQCKPGVTGDKCDRCDV 200
++ + + I+ C +T G+L+ +C G+C CKP V C+ C
Sbjct: 745 KPLYWNLSPDTIYGCSTCDCNT-----AGTLSEVAECTQRTGQCFCKPNVCSGTCNVCKD 799
Query: 201 NHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
++ + GC+ C+C+ GSV CD G+C C+ NVEG +C+
Sbjct: 800 GFFNLQKDSYFGCQGCQCDIGGSVGQA--CDERYGRCRCRPNVEGPKCK 846
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 118/263 (44%), Gaps = 42/263 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-SGDNFCTACNC 59
CNCNG S++C G C++C+ + G +CEKC ++ + D +C+
Sbjct: 1843 CNCNGHSDQCL---------DGSGICVNCRHNTAGNHCEKCLGGFHHNNTVDGHSVSCSS 1893
Query: 60 NP----IGSLNLQCN-----SEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
P + S N + RC C PG G KC+RC +Y + C+ C CN
Sbjct: 1894 CPCPLQVASNNFAIRCVEKPNNMRCLCMPGYAGSKCERCAPGYYGNPVVIGSTCQPCNCN 1953
Query: 108 PAGSVKNT--PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-D 164
S N +C + G+C+S ++ G H E+ G+ I + C R +
Sbjct: 1954 -GNSDPNMLFSDCHPLTGECQSCMHNTAGP-HCEICAPGFY-----GDAI-TAKNCTRCN 2005
Query: 165 TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVK 222
P G C+S G+C CKPGV G +CDRC+ + F GC+ C+C+ + ++
Sbjct: 2006 CSPCGTA-----HCDSHTGQCHCKPGVVGAQCDRCEHGTFGFDSCTGCRKCDCDASAALV 2060
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
CD V G C C+ V G C
Sbjct: 2061 QA--CDPVNGACACQPGVNGPNC 2081
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 50/210 (23%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G+ + C S G +C+C+P V G C +C +Y F C+ C C
Sbjct: 1415 NNGAVPCGCHEVGAESDTCESFGGQCRCRPNVIGRDCSQCATGYYGF--PNCRPCNCG-- 1470
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--- 166
+ C+ V G+C + + P D C+ T+
Sbjct: 1471 -----SRLCEPVTGEC----------------ICPPRTLQP------DCVTCEPQTFGCH 1503
Query: 167 PL----------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
PL S+++ C++ G+C+C+ + G +CDRC Y G C+ C C
Sbjct: 1504 PLVGCEMCNCSRPGVTSMDISCDTNNGQCRCRNNIVGRQCDRCXPGFY--GYPNCRPCNC 1561
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N AG+ N CDS G+C CK+NVEG +C
Sbjct: 1562 NEAGTEMNV--CDSFTGRCLCKENVEGPRC 1589
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 103/243 (42%), Gaps = 58/243 (23%)
Query: 29 CQGDRDGPNCEKCRDNY------YQ--------KSGDNFCTACNCNPIGSLNLQCNSEGR 74
C+ + G NC++C + Y YQ +G+N C CN G+ C + R
Sbjct: 441 CKPNYTGENCDQCAEGYEHFPECYQVLINGEVRPAGENIID-CECNAAGTEGNSCRPDPR 499
Query: 75 ---CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C CKP TG+ CD C ++ C+ C+C+ G + + CD+V GQC
Sbjct: 500 TNTCVCKPEFTGEHCDTCSHGYFSIN---CQRCQCSGQGCLDGS--CDAVTGQCVCR--- 551
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCK--RDTYPL------GHGGSLNLQCNSEGR 183
+G + + +C YPL GS+ C+ GR
Sbjct: 552 -------------------SGFQGYSCEQCAPGYFNYPLCQYCGCSVVGSIPEMCDPAGR 592
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+P TG +CD+C + + C+ C C+P S+ ++ C + QC C+ N G
Sbjct: 593 CLCRPEFTGPRCDQCQSGFHSY--PNCQVCTCDPRTSLDSS--CSELD-QCNCRPNYSGP 647
Query: 244 QCR 246
+C+
Sbjct: 648 RCQ 650
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 18/185 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-NLQCNSEGRCQCKPGVT 82
G C+ C + +G C+ C Y G C CNP GS+ N + G C C+P V
Sbjct: 682 GQCV-CLPNIEGQRCDSCSPGSY---GFPLCQLGTCNPAGSVHNDILPTVGSCVCRPYVE 737
Query: 83 GDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C+RC +++ GC +C+CN AG++ C GQC G +
Sbjct: 738 GVACERCKPLYWNLSPDTIYGCSTCDCNTAGTLSEVAECTQRTGQCFCKPNVCSGTCN-- 795
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
V F+ + + + C+ D GGS+ C+ GRC+C+P V G KC +
Sbjct: 796 --VCKDGFFNLQKDSYFGCQGCQCDI-----GGSVGQACDERYGRCRCRPNVEGPKCKQP 848
Query: 199 DVNHY 203
+HY
Sbjct: 849 RPDHY 853
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ G +CE+C Y+ C C C+ +GS+ C+ GRC C+P TG
Sbjct: 546 GQCV-CRSGFQGYSCEQCAPGYFNYP---LCQYCGCSVVGSIPEMCDPAGRCLCRPEFTG 601
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
+CD+C + + C+ C C+P S+ ++
Sbjct: 602 PRCDQCQSGFHSY--PNCQVCTCDPRTSLDSS 631
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 83/238 (34%), Gaps = 54/238 (22%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS----EGRCQ-CKPGV 81
C G CE+C YY + C CNCN N+ + G CQ C
Sbjct: 1920 CMPGYAGSKCERCAPGYYGNPVVIGSTCQPCNCNGNSDPNMLFSDCHPLTGECQSCMHNT 1979
Query: 82 TGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C+ C Y C C C+P G T +CDS GQC G V +
Sbjct: 1980 AGPHCEICAPGFYGDAITAKNCTRCNCSPCG----TAHCDSHTGQCHCKP----GVVGAQ 2031
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-----------GGSLNLQCNS-EGRCQCK 187
RC+ T+ +L C+ G C C+
Sbjct: 2032 CD------------------RCEHGTFGFDSCTGCRKCDCDASAALVQACDPVNGACACQ 2073
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
PGV G C +C H+++ GC+ CEC CD G+C C + G QC
Sbjct: 2074 PGVNGPNCHQCAPGHWNYSSNGCRKCECKGG-------RCDPRTGECRCTTGLTGKQC 2124
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
H G C C+ G C++C + C C+C+ +L C+ G C C+PG
Sbjct: 2017 HTGQC-HCKPGVVGAQCDRCEHGTFGFDSCTGCRKCDCDASAALVQACDPVNGACACQPG 2075
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCEC 106
V G C +C H+++ GC+ CEC
Sbjct: 2076 VNGPNCHQCAPGHWNYSSNGCRKCEC 2101
>gi|449276705|gb|EMC85137.1| Laminin subunit beta-2, partial [Columba livia]
Length = 1354
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 26/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--------GRC 75
G CL C + GP+C +C+ YY + + C C+CN +G+ C + G+C
Sbjct: 656 GRCLRCLYNTAGPHCAECQPGYYGDATRHSCRRCSCNTLGTDPSTCGPQQCQCDGRSGQC 715
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N ++ G GC+ C C+P ++ TP C+ GQC S + G
Sbjct: 716 HCLPHVEGQNCDRCSPNFWNLGSGQGCQPCACHPQHAL--TPACNQFTGQC-SCRPGFGG 772
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
R + Q DP R+C+ D P G N QC+ S G C+C+PG++G
Sbjct: 773 RTCGD--CQEHHWGDPQ-------RQCRACDCDPR---GVANTQCHRSSGHCECRPGISG 820
Query: 193 DKCDRC 198
+CD+C
Sbjct: 821 IRCDQC 826
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CT 55
C+CN S RC FD +Y TG+ G C CQ + G C C+ YY+ +
Sbjct: 11 CDCNEHSQRCHFDMAVYLATGNTSGSVCDGCQHNTMGRRCHLCKPFYYKDPSKDLRDPAV 70
Query: 56 ACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCK 102
+C+P GSL+ C+S G+C+CK V G +CDRC + A GC+
Sbjct: 71 CRDCDPEGSLDGGLCDSADDPARGLIAGQCRCKEHVAGPRCDRCKPGFFGLSAANPQGCQ 130
Query: 103 SCECNPAGSVKNTPNCDSVKGQC 125
C C+P G+V CD V G C
Sbjct: 131 RCRCDPRGTVAEGSRCDPVSGDC 153
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 103/264 (39%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG + C RTG C+ C+ DG C++C ++ C C
Sbjct: 528 CQCNGHAEDC------DPRTGS---CMRCRDHTDGERCQRCAAGHFGNPALGSGQHCRPC 578
Query: 58 NC--NPIGSLNLQCN-------SEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCE 105
C P + + +G C C PG TG +CD C +Y + C C+
Sbjct: 579 PCPEGPGSPRHFAASCYQDPRSRQGVCHCSPGYTGPRCDECAPGYYGDPLQPDGRCLPCQ 638
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ + CD G+C ++ G E + + R RRC +T
Sbjct: 639 CHDNIDATDPEACDRRTGRCLRCLYNTAGPHCAE----CQPGYYGDATR-HSCRRCSCNT 693
Query: 166 YPLGHGGSLNLQCNSEGR---CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
QC +GR C C P V G CDRC N ++ G GC+ C C+P ++
Sbjct: 694 LGTDPSTCGPQQCQCDGRSGQCHCLPHVEGQNCDRCSPNFWNLGSGQGCQPCACHPQHAL 753
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
TP C+ GQC C+ G C
Sbjct: 754 --TPACNQFTGQCSCRPGFGGRTC 775
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKP 79
G G C C +G NC++C N++ C C C+P +L CN G+C C+P
Sbjct: 710 GRSGQC-HCLPHVEGQNCDRCSPNFWNLGSGQGCQPCACHPQHALTPACNQFTGQCSCRP 768
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G G C C +H+ + C++C+C+P G V NT C G CE
Sbjct: 769 GFGGRTCGDCQEHHWGDPQRQCRACDCDPRG-VANT-QCHRSSGHCE 813
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 96/235 (40%), Gaps = 48/235 (20%)
Query: 35 GPNCEKCRDNYY--QKSGDNFCTACNCNP-IGSLNLQC--NSEGRC-QCKPGVTGDKCDR 88
GP C++C YY D C C C+ I + + + GRC +C G C
Sbjct: 613 GPRCDECAPGYYGDPLQPDGRCLPCQCHDNIDATDPEACDRRTGRCLRCLYNTAGPHCAE 672
Query: 89 CDVNHY-DFGEAGCKSCECNPAGSVKNT--PN---CDSVKGQCESAQLSSRGRVHTELRV 142
C +Y D C+ C CN G+ +T P CD GQC H V
Sbjct: 673 CQPGYYGDATRHSCRRCSCNTLGTDPSTCGPQQCQCDGRSGQC-----------HCLPHV 721
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCKPGV 190
+ +N D RC + + LG G +L CN G+C C+PG
Sbjct: 722 EG-QNCD----------RCSPNFWNLGSGQGCQPCACHPQHALTPACNQFTGQCSCRPGF 770
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C C +H+ + C++C+C+P G V NT C G CEC+ + G +C
Sbjct: 771 GGRTCGDCQEHHWGDPQRQCRACDCDPRG-VANT-QCHRSSGHCECRPGISGIRC 823
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G +CDRC + A GC+ C C+P G+V CD V G C CK
Sbjct: 98 GQCRCKEHVAGPRCDRCKPGFFGLSAANPQGCQRCRCDPRGTVAEGSRCDPVSGDCFCKR 157
Query: 239 NVEGAQC 245
V G C
Sbjct: 158 LVAGHSC 164
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P GSL+ +C +G +C+CKP V G +C RC + FG GC++C+C+ GSV
Sbjct: 434 CLCDPQGSLSAECRPQGGQCRCKPNVMGRRCHRCSPGTFGFGPGGCRACQCSREGSVSTV 493
Query: 116 PNCDSVKGQC 125
CDS GQC
Sbjct: 494 --CDSRTGQC 501
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 84/205 (40%), Gaps = 26/205 (12%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC C+ GS++ C+S G+C C+ G CDRC H+ F C+ C+CN
Sbjct: 479 CRACQCSREGSVSTVCDSRTGQCSCREGACPSCCDRCQPGHWGF--PACRPCQCN----- 531
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN-RIWDLRRCKRDTYPLGHG 171
+ +CD G C R R HT+ R GN + + C+ P G G
Sbjct: 532 GHAEDCDPRTGSC------MRCRDHTDGERCQRCAAGHFGNPALGSGQHCRPCPCPEGPG 585
Query: 172 GSLNLQC-------NSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPAGSV 221
+ + +G C C PG TG +CD C +Y + C C+C+
Sbjct: 586 SPRHFAASCYQDPRSRQGVCHCSPGYTGPRCDECAPGYYGDPLQPDGRCLPCQCHDNIDA 645
Query: 222 KNTPNCDSVKGQC-ECKDNVEGAQC 245
+ CD G+C C N G C
Sbjct: 646 TDPEACDRRTGRCLRCLYNTAGPHC 670
>gi|156354022|ref|XP_001623203.1| predicted protein [Nematostella vectensis]
gi|156209878|gb|EDO31103.1| predicted protein [Nematostella vectensis]
Length = 1440
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 92/200 (46%), Gaps = 27/200 (13%)
Query: 56 ACNCNPIGSLNLQCNSE--GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSV 112
AC CN G++ + G+C C+P V G KCD C ++YDF GCK+C CN GS
Sbjct: 660 ACECNATGAVTPSVCDQCGGQCSCRPHVIGRKCDECRPDYYDFTSGLGCKACACNMTGSK 719
Query: 113 KNTPNCDSVKGQCESAQLS---SRGRVHTELRVQSRKNFDPAG-NRIWDLRRCKRDTYPL 168
+++ + D+ K +C + SR H S P G N ++
Sbjct: 720 RSSCHPDTGKCECHPSITERQCSRCLDH-YFNFTSGVGCQPCGCNELY------------ 766
Query: 169 GHGGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
S +LQC N G C CK GV G KC C Y+ GC C+C+ GS+ P C
Sbjct: 767 ----SRDLQCDNDTGVCSCKDGVGGAKCTECSDAFYNLTTEGCTGCQCDLNGSLN--PVC 820
Query: 228 DSVKGQCECKDNVEGAQCRS 247
+ + G C C+ N G C S
Sbjct: 821 NKLNGNCTCRSNAIGRLCDS 840
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C + G NC+ C ++ + C ACNC GS + +CN+ G+C C P VT
Sbjct: 1237 GECLKCLYNTSGFNCQWCVSGFHGNATAKTCQACNCTDRGSKHGECNNVTGQCDCHPLVT 1296
Query: 83 GDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQC 125
G C+RC + +++ GC +C C+P GS N CD+V G C
Sbjct: 1297 GLSCERCVKDAFNYTSGKGCTACGCHPQGS--NDTQCDAVFGNC 1338
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDF 96
C +C D+Y+ + C C CN + S +LQC N G C CK GV G KC C Y+
Sbjct: 741 CSRCLDHYFNFTSGVGCQPCGCNELYSRDLQCDNDTGVCSCKDGVGGAKCTECSDAFYNL 800
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
GC C+C+ GS+ P C+ + G C
Sbjct: 801 TTEGCTGCQCDLNGSLN--PVCNKLNGNC 827
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
DC G +CE+C + + + CTAC C+P GS + QC++ G C C V GDKC
Sbjct: 1290 DCHPLVTGLSCERCVKDAFNYTSGKGCTACGCHPQGSNDTQCDAVFGNCTCNTNVKGDKC 1349
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
D+C N YD G++ C C S + P D Q + A + G
Sbjct: 1350 DQCMPNFYDVGKS-CIGVSCTARSSAWSRPAPDEGSLQLDVAFRPTLG 1396
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 109/264 (41%), Gaps = 41/264 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CN ++ C D E G C+DCQ + G +CEKC Y + + + C
Sbjct: 1108 CSCNNHTDTC--DPE-------SGVCIDCQHNTTGDHCEKCAVGLYGDATNGTSSDCREC 1158
Query: 61 PIGSLNLQCNSEGR------------CQCKPGVTGDKCDRCDVNHY----DFGEAGCKSC 104
P NS R C G +C+RC +Y D C+ C
Sbjct: 1159 PCPGGPFSANSFARSCVLGSDGLPTCTNCSESHAGRQCERCQDGYYGTPTDPVNGQCRKC 1218
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKR 163
CN T NC++ G+C ++ G + + V GN + C
Sbjct: 1219 NCNGNVDPGVTGNCNTTTGECLKCLYNTSG-FNCQWCVSGFH-----GNATAKTCQACNC 1272
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
HG +CN+ G+C C P VTG C+RC + +++ GC +C C+P GS
Sbjct: 1273 TDRGSKHG-----ECNNVTGQCDCHPLVTGLSCERCVKDAFNYTSGKGCTACGCHPQGS- 1326
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
N CD+V G C C NV+G +C
Sbjct: 1327 -NDTQCDAVFGNCTCNTNVKGDKC 1349
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 2 NCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCR-DNYYQKSGDNF--CTACN 58
C G +N F + N+T +G R P E + D +Y + N C+ACN
Sbjct: 354 TCLGKTNHIMFINSIINQT---------KGFR--PTRENIKKDGFYSLNAGNTAGCSACN 402
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
C+P GS+N+ C+ G C C+P +G KCD + Y
Sbjct: 403 CDPAGSINVTCSDGGACHCRPHFSGLKCDVIERGFY 438
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 79/194 (40%), Gaps = 52/194 (26%)
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQ 124
N + E CQ G GD Y G+A CECN G+V TP+ CD GQ
Sbjct: 635 NWTGHKEIGCQVLAGFYGDL--------YQKGQA----CECNATGAV--TPSVCDQCGGQ 680
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GS 173
C R H V RK C+ D Y G GS
Sbjct: 681 CSC-------RPH----VIGRK-----------CDECRPDYYDFTSGLGCKACACNMTGS 718
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVK 231
C+ + G+C+C P +T +C RC ++++F GC+ C CN S CD+
Sbjct: 719 KRSSCHPDTGKCECHPSITERQCSRCLDHYFNFTSGVGCQPCGCNELYS--RDLQCDNDT 776
Query: 232 GQCECKDNVEGAQC 245
G C CKD V GA+C
Sbjct: 777 GVCSCKDGVGGAKC 790
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 84/223 (37%), Gaps = 45/223 (20%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCN---SEGRC-QCK 78
C +C G CE+C+D YY D C CNCN + N + G C +C
Sbjct: 1184 CTNCSESHAGRQCERCQDGYYGTPTDPVNGQCRKCNCNGNVDPGVTGNCNTTTGECLKCL 1243
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
+G C C + A C++C C GS C++V GQC+ L +
Sbjct: 1244 YNTSGFNCQWCVSGFHGNATAKTCQACNCTDRGSKHG--ECNNVTGQCDCHPLVTG---- 1297
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNSE-GRCQ 185
RC +D + G GS + QC++ G C
Sbjct: 1298 ------------------LSCERCVKDAFNYTSGKGCTACGCHPQGSNDTQCDAVFGNCT 1339
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
C V GDKCD+C N YD G++ C C S + P D
Sbjct: 1340 CNTNVKGDKCDQCMPNFYDVGKS-CIGVSCTARSSAWSRPAPD 1381
>gi|338724761|ref|XP_001915830.2| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-3-like [Equus
caballus]
Length = 1172
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 116/272 (42%), Gaps = 50/272 (18%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ HGG C +C+ +G NCE+C+ +Y++
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPIQET 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ G+C CK V G++CD C A GC C+C+
Sbjct: 376 CIPCECDPDGAVPGAPCDPLTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCSV 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
GS ++ P CD G+C L D W L
Sbjct: 436 LGSRRDMP-CDEESGRCLC------------LPHVVGPKCDQCAPHHWKLAS-------- 474
Query: 169 GHG---------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH-----YDFGEAGCKSC 213
G G SL+ QCN G+C C+ G G C + Y AGC++C
Sbjct: 475 GRGCEPCACDPRNSLSPQCNQLTGQCPCREGFGGLTCSAAAIRQCPDRTYGDAAAGCRAC 534
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+ G+ P CD G+C C+ + G +C
Sbjct: 535 DCDFRGT--EGPGCDKASGRCLCRPGLTGPRC 564
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 108/243 (44%), Gaps = 38/243 (15%)
Query: 29 CQGDRDGPNCEKCRDNY----YQKSGD---NFCTACNCN---------PIGSLNLQCNSE 72
CQ + GPNCE+C Y ++ + D + C C+CN P Q
Sbjct: 281 CQHNTAGPNCERCAPFYNNRPWRPADDQDPHECQRCDCNGHSETCHFDPAVFAASQGAHG 340
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C C+ G C+RC ++++ G C CEC+P G+V P CD + GQC
Sbjct: 341 GVCDNCRDHTEGKNCERCQLHYFRNRRPGAPIQETCIPCECDPDGAVPGAP-CDPLTGQC 399
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
+ V E + F G + + C R D L G ++ C+ E GR
Sbjct: 400 -----VCKEHVQGERCDLCKPGF--TGLTYANPQGCHRCDCSVL--GSRRDMPCDEESGR 450
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C P V G KCD+C +H+ GC+ C C+P S+ +P C+ + GQC C++ G
Sbjct: 451 CLCLPHVVGPKCDQCAPHHWKLASGRGCEPCACDPRNSL--SPQCNQLTGQCPCREGFGG 508
Query: 243 AQC 245
C
Sbjct: 509 LTC 511
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 36/191 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C C+C+ +GS ++ C+ E GRC C P
Sbjct: 397 GQCV-CKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCSVLGSRRDMPCDEESGRCLCLP 455
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C +H+ GC+ C C+P S+ +P C+ + GQC
Sbjct: 456 HVVGPKCDQCAPHHWKLASGRGCEPCACDPRNSL--SPQCNQLTGQCPC----------- 502
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-----------SEGRCQCK 187
R+ F +R+C TY G C+ + GRC C+
Sbjct: 503 ------REGFGGLTCSAAAIRQCPDRTYGDAAAGCRACDCDFRGTEGPGCDKASGRCLCR 556
Query: 188 PGVTGDKCDRC 198
PG+TG +CD+C
Sbjct: 557 PGLTGPRCDQC 567
>gi|47228486|emb|CAG05306.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1724
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 93/215 (43%), Gaps = 46/215 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ + G CE+C+ ++ + C C CN GSL+ C+ EGRC+C GV G
Sbjct: 911 GQCL-CRENVTGRACERCQSGFFGLRREQGCQGCGCNQSGSLSESCDEEGRCRCMTGVGG 969
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
DKCDRC +Y + C++C C G NCD G+C
Sbjct: 970 DKCDRCGHGYYGADISSCRACTCVHTGG-----NCDPQTGECTC---------------- 1008
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPG 189
PA RCK + GH GS L+C+ + G+CQC+ G
Sbjct: 1009 ------PANTEGPTCGRCKAGYW--GHNPTTGCEPCSCSVEGSSALECDLTNGQCQCREG 1060
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
G CD C ++ G C C C+ AG+ +N
Sbjct: 1061 FGGKSCDHCATGYH--GYPACLPCGCDLAGTDENV 1093
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 113/279 (40%), Gaps = 62/279 (22%)
Query: 23 GGHCL-DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNC---NPIGSLNLQCNSEGRC 75
G CL C + GP+CE+C +Y + + C C C NP S + C E
Sbjct: 745 AGVCLVSCAHNTSGPHCEECLPGFYGNATEGTADDCQPCPCPLTNPSNSFSPTCVLEASG 804
Query: 76 Q-----CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCES 127
Q C+ G TG C+RC Y + C C+C+ +V +CD V G+C
Sbjct: 805 QVSCDRCQEGYTGTTCERCASGFYGNPQVVGGTCVRCDCHGNVNVSEAGHCDVVTGECLR 864
Query: 128 AQLSSRGRVHTEL--------RVQSRK------NFDPAGNRIWDL--------------- 158
L + G H E+ V+++ + A + + D+
Sbjct: 865 C-LFNTGGPHCEVCQPGYYGDAVRAKNCQECGCDVVGAVSSVCDVTTGQCLCRENVTGRA 923
Query: 159 -RRCKRDTYPL-----------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 206
RC+ + L GSL+ C+ EGRC+C GV GDKCDRC +Y
Sbjct: 924 CERCQSGFFGLRREQGCQGCGCNQSGSLSESCDEEGRCRCMTGVGGDKCDRCGHGYYGAD 983
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C++C C G NCD G+C C N EG C
Sbjct: 984 ISSCRACTCVHTGG-----NCDPQTGECTCPANTEGPTC 1017
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 68/134 (50%), Gaps = 20/134 (14%)
Query: 1 CNCNGFSNRCFFDK---------ELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+ + CF+++ +L+ GG C+ CQ + G NCE C D YY+ +
Sbjct: 332 CNCHNKATDCFYNQTVAELSLSLDLHGLRRGGGVCVSCQQNTAGVNCESCVDGYYRPAEV 391
Query: 50 ---GDNFCTACNCNPIGSLNLQCN----SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 102
D C AC+C+P GS + C+ G+C CK G TG +CD C + DF + C
Sbjct: 392 SPYSDFPCVACSCDPRGSESPVCSRGDTQPGQCVCKQGFTGRQCDTCAFGYRDFPQ--CV 449
Query: 103 SCECNPAGSVKNTP 116
CEC+ AGS P
Sbjct: 450 RCECHSAGSTNADP 463
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 103/231 (44%), Gaps = 33/231 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCN-SEGRCQCK 78
G CL C + GP+CE C+ YY GD C C C+ +G+++ C+ + G+C C+
Sbjct: 860 GECLRCLFNTGGPHCEVCQPGYY---GDAVRAKNCQECGCDVVGAVSSVCDVTTGQCLCR 916
Query: 79 PGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
VTG C+RC + E GC+ C CN +GS+ + CD GR
Sbjct: 917 ENVTGRACERCQSGFFGLRREQGCQGCGCNQSGSLSES--CD------------EEGRCR 962
Query: 138 TELRVQSRKNFDPAGNRIW--DLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
V K D G+ + D+ C+ T + GG+ + Q G C C G C
Sbjct: 963 CMTGVGGDK-CDRCGHGYYGADISSCRACTC-VHTGGNCDPQ---TGECTCPANTEGPTC 1017
Query: 196 DRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
RC ++ GC+ C C+ GS + CD GQC+C++ G C
Sbjct: 1018 GRCKAGYWGHNPTTGCEPCSCSVEGS--SALECDLTNGQCQCREGFGGKSC 1066
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 16/171 (9%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNP 61
N FS C + L + C CQ G CE+C +Y C C+C+
Sbjct: 1455 NSFSATCVSEGLLGDF-----RCTACQSGYQGRYCERCSTGFYGNPSVPGGVCLPCDCSG 1509
Query: 62 IGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS CN+ G+C CK GV G CD+C+ H E C SC+ + G + N +
Sbjct: 1510 WGSRQPVCNNLSGKCDCKAGVKGRSCDQCEDRHI-LQEGECVSCDDSCTGVLLN--ELED 1566
Query: 121 VKGQCESAQLSSRGRVH----TELRVQSRK-NFDPAGNRIWDLRRCKRDTY 166
V + +SS +L QSR+ R+ ++C D
Sbjct: 1567 VDHHLRTVNISSLAVASYLQLAQLEKQSRQLQVTAQHRRLLGTQQCSDDAL 1617
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG +CD C + DF + C CEC+ AGS P C C CK NV
Sbjct: 422 GQCVCKQGFTGRQCDTCAFGYRDFPQ--CVRCECHSAGSTNADP-CTP----CTCKVNVM 474
Query: 242 GAQC 245
GA C
Sbjct: 475 GANC 478
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 25/139 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+ S RC + G C DCQ G +C++C Y+ + C+ C
Sbjct: 1399 CRCSNHSERCDVES---------GECQDCQHHTSGESCQQCAPGYHGNVSGSISDCSLCA 1449
Query: 59 CNPI--GSLNLQCNSEG-----RCQ-CKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
C P+ S + C SEG RC C+ G G C+RC Y C C+C+
Sbjct: 1450 C-PLKDNSFSATCVSEGLLGDFRCTACQSGYQGRYCERCSTGFYGNPSVPGGVCLPCDCS 1508
Query: 108 PAGSVKNTPNCDSVKGQCE 126
GS + P C+++ G+C+
Sbjct: 1509 GWGSRQ--PVCNNLSGKCD 1525
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 91/250 (36%), Gaps = 56/250 (22%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC--QCKPGVT 82
+C G +CE C +Y+ G F C C CN + +C+S G C C +
Sbjct: 701 ECPWGYSGTSCEVCLSGFYRVGGVLFGGNCMQCECNDHAT---ECDSAGVCLVSCAHNTS 757
Query: 83 GDKCDRCDVNHYDFGEAG----CKSCEC---NPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
G C+ C Y G C+ C C NP+ S +P C L + G+
Sbjct: 758 GPHCEECLPGFYGNATEGTADDCQPCPCPLTNPSNSF--SPTC----------VLEASGQ 805
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PLGHGGSL-------NLQCNSEGRCQC 186
V + R Q G RC Y P GG+ N+ + G C
Sbjct: 806 VSCD-RCQE-------GYTGTTCERCASGFYGNPQVVGGTCVRCDCHGNVNVSEAGHCDV 857
Query: 187 KPG--------VTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
G G C+ C +Y C+ C C+ G+V + CD GQC C
Sbjct: 858 VTGECLRCLFNTGGPHCEVCQPGYYGDAVRAKNCQECGCDVVGAVSSV--CDVTTGQCLC 915
Query: 237 KDNVEGAQCR 246
++NV G C
Sbjct: 916 RENVTGRACE 925
>gi|260811219|ref|XP_002600320.1| hypothetical protein BRAFLDRAFT_66822 [Branchiostoma floridae]
gi|229285606|gb|EEN56332.1| hypothetical protein BRAFLDRAFT_66822 [Branchiostoma floridae]
Length = 1752
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 102/247 (41%), Gaps = 42/247 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C +C + G +C++C D +Y CT C+CN GS + C+ + G+C C+P
Sbjct: 916 GQCTNCTNNTGGDHCKRCADGWYGLVMPGMGSNCTECSCNNTGSTSPTCDHNTGQCACQP 975
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS-------- 131
+TG +CD C+ N++DF GC +C C+ G+V +P CD G C +
Sbjct: 976 NITGRQCDVCEPNYWDFSTEGCTTCSCHQPGAV--SPQCDLTTGACTCTDHAMGMQCDGC 1033
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL----NLQCNSEGRCQCK 187
G H N+ + C D Y G G + N C
Sbjct: 1034 ETGYYH---------------NQDQECVNCSIDQYISGEGIDIITSPNYPILYPSNLDCW 1078
Query: 188 PGVTGDKCDRCDVNHYDFG----EAGCK-----SCECNPAGSVKNTPNCDSVKGQCECKD 238
+T D +V +F AG SC C+ G+V CD GQC+C+
Sbjct: 1079 YVITTDPGYALEVTILNFDLPDRSAGNDVTSGGSCNCSILGTVNGNMTCDPRSGQCDCRS 1138
Query: 239 NVEGAQC 245
V G +C
Sbjct: 1139 GVRGQKC 1145
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 40/165 (24%)
Query: 54 CTACNCNPIGSLNLQC--NSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNP 108
CT+CNC G N N+ G+C CK V G CD C V ++ GC++C+C+
Sbjct: 59 CTSCNCTTSGITNNGTCDNTTGQCTCKEQVFGRTCDTCKVGFWNLTADNPYGCQACDCDA 118
Query: 109 AGSVKNTPNCDSVKG-----------QCESAQLSS----RGRVHTELRVQSRKNF---DP 150
AG+ ++ CD + G +C+ ++SS RG+ + N +P
Sbjct: 119 AGTFNSSNLCDQLTGTCVCKDNTEGDRCDRCKVSSDRCDRGK-------EGSYNLTADNP 171
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
AG + C+ D GGS++ QCNS G CQC+P +TG C
Sbjct: 172 AGCTL-----CECDP-----GGSVSPQCNSTGHCQCRPNMTGKTC 206
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 179 NSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCE 235
N+ G+C CK V G CD C V ++ GC++C+C+ AG+ ++ CD + G C
Sbjct: 77 NTTGQCTCKEQVFGRTCDTCKVGFWNLTADNPYGCQACDCDAAGTFNSSNLCDQLTGTCV 136
Query: 236 CKDNVEGAQC 245
CKDN EG +C
Sbjct: 137 CKDNTEGDRC 146
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 21/116 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN---LQCNSEGRCQCKPGVTG 83
C+ G C+ C+ ++ + DN C AC+C+ G+ N L G C CK G
Sbjct: 84 CKEQVFGRTCDTCKVGFWNLTADNPYGCQACDCDAAGTFNSSNLCDQLTGTCVCKDNTEG 143
Query: 84 DKCDRCDVN----------HYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCE 126
D+CDRC V+ Y+ AGC CEC+P GSV +P C+S G C+
Sbjct: 144 DRCDRCKVSSDRCDRGKEGSYNLTADNPAGCTLCECDPGGSV--SPQCNS-TGHCQ 196
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C C PGV G CD C Y GC +C+C+ +GSV + CD V G C C +NV
Sbjct: 421 GQCVCLPGVVGRGCDLCAAYTYGIATGEGCTACDCDQSGSVAQS--CDPVTGACRCHENV 478
Query: 241 EGAQCRS 247
+C S
Sbjct: 479 LPPKCDS 485
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 16/77 (20%)
Query: 182 GRCQCKPGVTGDKCDRCDVN----------HYDFGE---AGCKSCECNPAGSVKNTPNCD 228
G C CK GD+CDRC V+ Y+ AGC CEC+P GSV +P C+
Sbjct: 133 GTCVCKDNTEGDRCDRCKVSSDRCDRGKEGSYNLTADNPAGCTLCECDPGGSV--SPQCN 190
Query: 229 SVKGQCECKDNVEGAQC 245
S G C+C+ N+ G C
Sbjct: 191 S-TGHCQCRPNMTGKTC 206
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 38 CEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKC 86
C++ ++ Y + DN CT C C+P GS++ QCNS G CQC+P +TG C
Sbjct: 156 CDRGKEGSYNLTADNPAGCTLCECDPGGSVSPQCNSTGHCQCRPNMTGKTC 206
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C+ C G C+ C Y + CTAC+C+ GS+ C+ G C+C V
Sbjct: 420 GGQCV-CLPGVVGRGCDLCAAYTYGIATGEGCTACDCDQSGSVAQSCDPVTGACRCHENV 478
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 115
KCD C +HY GC C CN S NT
Sbjct: 479 LPPKCDSCAEDHYGLHTGQGCLPCACNLTYSYNNT 513
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 90/231 (38%), Gaps = 37/231 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRT-GHGGHCLDCQGDRDGPNCEKCRDNYYQK--SGDNF---C 54
C C G FD + +T G C +C G+ G +C+ C + +Y + + N C
Sbjct: 843 CECPGLVG---FDTNYFAKTCDENGTCHNCIGNHVGNHCQDCAEGFYGQPHNATNLNGTC 899
Query: 55 TACNCN---PI-GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG----CKSCEC 106
C C P+ S++ QC + C GD C RC Y G C C C
Sbjct: 900 LPCECTDSPPVCDSVSGQCTN-----CTNNTGGDHCKRCADGWYGLVMPGMGSNCTECSC 954
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
N GS +P CD GQC + Q + GR D WD T
Sbjct: 955 NNTGS--TSPTCDHNTGQC-ACQPNITGR-----------QCDVCEPNYWDFSTEGCTTC 1000
Query: 167 PLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
G+++ QC+ + G C C G +CD C+ +Y + C +C +
Sbjct: 1001 SCHQPGAVSPQCDLTTGACTCTDHAMGMQCDGCETGYYHNQDQECVNCSID 1051
>gi|167538373|ref|XP_001750851.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770672|gb|EDQ84355.1| predicted protein [Monosiga brevicollis MX1]
Length = 10056
Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 1 CNCNGFSNRCFF----DKELYNRT-GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-- 53
C C+G ++ C + D + T G GG C +C G C C D ++ S +
Sbjct: 561 CTCHGKADACVYSAAHDPHPDSWTVGDGGVC-NCTAHTTGRQCAACADGFFLPSNRSITE 619
Query: 54 ---CTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
C C CN G C + +G C CKP V G CD C ++ A GC++C C
Sbjct: 620 VDPCRPCVCNAAGRATATCQDGDGACSCKPHVQGSTCDVCARGFFNLSAANPEGCQACVC 679
Query: 107 NPAGSV-KNTPNCDSVKGQC 125
N AGS NT C +G C
Sbjct: 680 NEAGSRHNNTFFCGQDEGGC 699
Score = 70.1 bits (170), Expect = 7e-10, Method: Composition-based stats.
Identities = 63/217 (29%), Positives = 86/217 (39%), Gaps = 32/217 (14%)
Query: 53 FCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCD--VNHYDFGEA-------GCKS 103
F C P+ S + NS C C G +C+ C N F A C+
Sbjct: 502 FELECGPEPVRS-SPPYNSTLSCSCGGNTIGSQCEACAPLYNAKPFRPALGPAAAFTCQP 560
Query: 104 CECNPAG-----SVKNTPNCDSVK----GQCE-SAQLSSRGRVHTELRVQSRKNFDPAGN 153
C C+ S + P+ DS G C +A + R + + F P+
Sbjct: 561 CTCHGKADACVYSAAHDPHPDSWTVGDGGVCNCTAHTTGR-----QCAACADGFFLPSNR 615
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 209
I ++ C+ G C + +G C CKP V G CD C ++ A G
Sbjct: 616 SITEVDPCRPCV--CNAAGRATATCQDGDGACSCKPHVQGSTCDVCARGFFNLSAANPEG 673
Query: 210 CKSCECNPAGSV-KNTPNCDSVKGQCECKDNVEGAQC 245
C++C CN AGS NT C +G C CKDNV GA C
Sbjct: 674 CQACVCNEAGSRHNNTFFCGQDEGGCLCKDNVLGAAC 710
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 83/248 (33%), Gaps = 38/248 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--------SGDN 52
C C+GF C + + + C G+ G CE C Y K +
Sbjct: 497 CACHGFELECGPEPVRSSPPYNSTLSCSCGGNTIGSQCEACAPLYNAKPFRPALGPAAAF 556
Query: 53 FCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY-----D 95
C C C+ + + G C C TG +C C +
Sbjct: 557 TCQPCTCHGKADACVYSAAHDPHPDSWTVGDGGVCNCTAHTTGRQCAACADGFFLPSNRS 616
Query: 96 FGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
E C+ C CN AG + T C G C S + +G + V +R F+ +
Sbjct: 617 ITEVDPCRPCVCNAAG--RATATCQDGDGAC-SCKPHVQG---STCDVCARGFFNLSAAN 670
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCK 211
+ C + H + EG C CK V G CD C ++ A GC
Sbjct: 671 PEGCQACVCNEAGSRHNNTF-FCGQDEGGCLCKDNVLGAACDTCRPGFFNLSTAHDQGCI 729
Query: 212 SCE--CNP 217
+C C+P
Sbjct: 730 ACHALCDP 737
>gi|326665004|ref|XP_003197932.1| PREDICTED: laminin subunit gamma-2 [Danio rerio]
Length = 1138
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 9/90 (10%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C+C+G + C D+ G +CL+CQG+ G +CE C++ YY Q++GDN C CNC
Sbjct: 30 CSCHGKARFCRADQ-------LGLYCLNCQGNTQGRHCESCKEGYYHQRAGDN-CVPCNC 81
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRC 89
NP GS C+S G+C CK G+ GDKCDRC
Sbjct: 82 NPAGSQGPVCSSNGQCTCKQGIHGDKCDRC 111
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C C GPNCE C Y+ C ACNCN GS++ C+ +G+C+CK G G
Sbjct: 495 GQCRKCLNHSTGPNCEYCEAGYHHNYPTEPCQACNCNRQGSVSNSCSDKGQCECKEGYDG 554
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGS 111
+C+ E+ C SC NP S
Sbjct: 555 LRCE----------ESTCPSC-FNPVKS 571
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 191 TGDKCDRCDVN-HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
TG C+ C+ H+++ C++C CN GSV N+ C S KGQCECK+ +G +C
Sbjct: 505 TGPNCEYCEAGYHHNYPTEPCQACNCNRQGSVSNS--C-SDKGQCECKEGYDGLRC 557
>gi|345326490|ref|XP_003431050.1| PREDICTED: netrin-1-like [Ornithorhynchus anatinus]
Length = 603
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C CR+ YY+
Sbjct: 361 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCREGYYRDLSKPITHRKA 420
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C PA
Sbjct: 421 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPAPPP 479
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW 156
+ C+S +S+G++ ++ +K++ IW
Sbjct: 480 TTAASSTEEPEDCDSYCKASKGKLKINMKKYCKKDYA-----IW 518
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 62/164 (37%), Gaps = 41/164 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRT----------------GHGGHCLDCQGDRDGPNCEKCRDN 44
C CNG + RC D G GG DC+ GP C++C+
Sbjct: 282 CKCNGHAARCVRDGAHGPGNGPGPGPGPGHAPHGADGPGGLVCDCKHHTAGPECDRCKPF 341
Query: 45 YYQKSGD-------NFCTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCD 87
+Y + N C ACNCN N++ S G C C+ G C
Sbjct: 342 HYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCH 401
Query: 88 RCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQC 125
C +Y D + CK+C+C+P G+ T C+ GQC
Sbjct: 402 YCREGYYRDLSKPITHRKACKACDCHPVGAAGKT--CNQTTGQC 443
>gi|119595779|gb|EAW75373.1| laminin, alpha 5, isoform CRA_b [Homo sapiens]
Length = 3714
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 102/242 (42%), Gaps = 53/242 (21%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 606 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 661
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 662 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 711
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR--CQCKPGVTGDKCD 196
V NF C+ D+ C S+ + C C+ V G CD
Sbjct: 712 DTCVPGAYNFP----------YCEGDS------------CESQAQVPCMCRAHVEGPSCD 749
Query: 197 RCDVNHYDFGEA---GCK--------SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
RC + + GC C C+ G++ C GQC CK +V G C
Sbjct: 750 RCKPGFWGLSPSNPEGCTRECALEYWGCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQAC 809
Query: 246 RS 247
S
Sbjct: 810 AS 811
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1439 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1489
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1490 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1527
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1528 ECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1585
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1586 APGV--CDPLTGQCYCKENVQGPKC 1608
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G CDR
Sbjct: 566 CRVGFEGATCDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDR 622
Query: 89 CDVNHYDFGEAGCKSCECNPAGSV 112
C ++ F C++C C+P G++
Sbjct: 623 CRPGYHGF--PNCQACTCDPRGAL 644
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C CK GVTG +CDRC H+ F G GC+ C C PA C GQC C+
Sbjct: 2064 GHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---CHPQSGQCHCRPGT 2120
Query: 241 EGAQCR 246
G QCR
Sbjct: 2121 MGPQCR 2126
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
H GHCL C+ G C++C++ ++ G C C C P +C+ + G+C C+PG
Sbjct: 2062 HSGHCL-CKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAE-GSECHPQSGQCHCRPG 2119
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +C C ++ E GC+ C+C P G CD G+C
Sbjct: 2120 TMGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGRC 2157
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 81/204 (39%), Gaps = 49/204 (24%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 498 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 554
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPL 168
+ CD GQC + R F+ A C R +PL
Sbjct: 555 D--RCDPDTGQC-----------------RCRVGFEGA--------TCDRCAPGYFHFPL 587
Query: 169 ------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 588 CQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALD 645
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 646 QL--CGA-GGLCRCRPGYTGTACQ 666
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 82/235 (34%), Gaps = 64/235 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY------------QK 48
C+ NG N F D + G C C GP CE C +Y ++
Sbjct: 1972 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRRRR 2026
Query: 49 SGDN--------------FCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
+G + C+C P G+ +S G C CK GVTG +CDRC H+
Sbjct: 2027 AGRDAPWGGLRGEEGGLLGVPRCDCTPCGTEACDPHS-GHCLCKAGVTGRRCDRCQEGHF 2085
Query: 95 DF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
F G GC+ C C PA C GQC G
Sbjct: 2086 GFDGCGGCRPCACGPAAEGSE---CHPQSGQCHCR----------------------PGT 2120
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCNS------EGRCQCKPGVTGDKCDRCDVNH 202
R C + L G QC GRC C PG++G++CD C H
Sbjct: 2121 MGPQCRECAPGYWGLPEQGCRRCQCPGGRCDPHTGRCNCPPGLSGERCDTCSQQH 2175
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C+C P G CD G+C C +
Sbjct: 2112 GQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGRCNCPPGLS 2164
Query: 242 GAQC 245
G +C
Sbjct: 2165 GERC 2168
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 18/113 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CT--------ACNCNPIGSLN--LQCNS-EGRC 75
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C
Sbjct: 739 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRECALEYWGCSCDLRGTLGGVAECQPGTGQC 798
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
CKP V G C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 799 FCKPHVCGQACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 849
>gi|297282019|ref|XP_002802197.1| PREDICTED: laminin subunit beta-3-like [Macaca mulatta]
Length = 1174
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ +GG C +C+ +G NCE+C+ +Y++ S
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQET 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ G+C CK V G++CD C A GC C+CN
Sbjct: 376 CIPCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNI 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGR----VHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
GS ++ P CD G+C + ++ S + +P C D
Sbjct: 436 LGSRRDVP-CDEESGRCLCLPNVVGPKCDQCAPYHWKLASGQGCEP----------CACD 484
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH-----YDFGEAGCKSCECNPA 218
+ SL+ QCN G+C C+ G G C + Y GC++C+C+
Sbjct: 485 PH-----NSLSPQCNQFTGQCPCREGFGGLTCSAAAIRQCPDRTYGDAATGCRACDCDFR 539
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD G+C C+ + G +C
Sbjct: 540 GT--EGPGCDKASGRCLCRAGLTGPRC 564
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 103/243 (42%), Gaps = 38/243 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN---------PIGSLNLQCNSE 72
CQ + GPNCE+C Y + + C C+CN P Q
Sbjct: 281 CQHNTAGPNCERCAPFYNNRPWRPAEGRDTHECQRCDCNGHSETCHFDPAVFAASQGAYG 340
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C C+ G C+RC ++++ G C CEC+P G+V P CD V GQC
Sbjct: 341 GVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCIPCECDPDGAVPGAP-CDPVTGQC 399
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
+ V E + F G + + C R D LG ++ C+ E GR
Sbjct: 400 -----VCKEHVQGERCDLCKPGF--TGLTYANPQGCHRCDCNILG--SRRDVPCDEESGR 450
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C P V G KCD+C H+ GC+ C C+P S+ +P C+ GQC C++ G
Sbjct: 451 CLCLPNVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSL--SPQCNQFTGQCPCREGFGG 508
Query: 243 AQC 245
C
Sbjct: 509 LTC 511
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 36/191 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C C+CN +GS ++ C+ E GRC C P
Sbjct: 397 GQCV-CKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDVPCDEESGRCLCLP 455
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C H+ GC+ C C+P S+ +P C+ GQC
Sbjct: 456 NVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSL--SPQCNQFTGQCPC----------- 502
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-----------SEGRCQCK 187
R+ F +R+C TY G C+ + GRC C+
Sbjct: 503 ------REGFGGLTCSAAAIRQCPDRTYGDAATGCRACDCDFRGTEGPGCDKASGRCLCR 556
Query: 188 PGVTGDKCDRC 198
G+TG +CD+C
Sbjct: 557 AGLTGPRCDQC 567
>gi|449276683|gb|EMC85115.1| Netrin-4, partial [Columba livia]
Length = 601
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 14/120 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C C+ ++ C FD ++ +G GG C +C+ + +G C++C+ YY+ S
Sbjct: 298 CRCHSHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMSSPEV 357
Query: 54 CTACNCNPIGSLNLQCNSEGRCQ-------CKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C C P+GS N + RC CKPGV G CDRC + ++ FGE GC+ C+C
Sbjct: 358 CKPCACQPVGSANATFSRSWRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGENGCRPCDC 417
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 88/245 (35%), Gaps = 90/245 (36%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHG-----GHCLDCQGDRDGPNCEKCRDNY---YQKSGD- 51
C CNG + C EL NRTG G C+ C+ + G +CEKC Y K GD
Sbjct: 233 CFCNGHAEEC----ELANRTGVTENTVHGKCV-CRHNTAGDHCEKCAPLYNDQPWKPGDG 287
Query: 52 -----NFCTACNCNPIGS-----LNLQCNSEGRC-----QCKPGVTGDKCDRCDVNHY-D 95
N C C C+ L++ S R CK G +C RC +Y D
Sbjct: 288 KTGAPNECKKCRCHSHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRD 347
Query: 96 FGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
G+ CK C C P GS T
Sbjct: 348 RGKPMSSPEVCKPCACQPVGSANAT----------------------------------- 372
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
+R W RC T G C CKPGV G CDRC + ++ FGE GC
Sbjct: 373 -FSRSW---RCHPKT----------------GFCYCKPGVAGPNCDRCLMGYWGFGENGC 412
Query: 211 KSCEC 215
+ C+C
Sbjct: 413 RPCDC 417
>gi|357622603|gb|EHJ74029.1| putative laminin A chain [Danaus plexippus]
Length = 3687
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ + G +CE C D YY C C CN +GS++ C+ E G C CK +G C+
Sbjct: 460 CKYNYAGKSCEMCADGYYSPE----CKNCECNSVGSVSQVCDKESGNCTCKSKYSGRTCN 515
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C+ +Y++ CK C C+ +G+ N CD V GQC R L
Sbjct: 516 QCEAGYYEY--PTCKQCNCDVSGTEPNV--CDDVTGQCVCKPGFGGVRCDQCL------- 564
Query: 148 FDPAGNRIWDLRRCKRDTYP--LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF 205
+++ +R P GS + C+++G+C C G +CD+C +Y F
Sbjct: 565 ----SGYFMEVKGRERSCVPCNCSPTGSTSTSCSADGKCNCLVNFGGKQCDQCSPGYYKF 620
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
E C C C+ +G+ +T CD GQC CK N +G +C
Sbjct: 621 PE--CLPCNCDESGTFGST--CDD-SGQCHCKPNFDGIKC 655
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 112/272 (41%), Gaps = 59/272 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
G C+ C+ G C++C Y+ K + C CNC+P GS + C+++G+C C
Sbjct: 547 GQCV-CKPGFGGVRCDQCLSGYFMEVKGRERSCVPCNCSPTGSTSTSCSADGKCNCLVNF 605
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT----------PNCDSVK--------- 122
G +CD+C +Y F E C C C+ +G+ +T PN D +K
Sbjct: 606 GGKQCDQCSPGYYKFPE--CLPCNCDESGTFGSTCDDSGQCHCKPNFDGIKCDKCKEQFY 663
Query: 123 --GQCESAQLSSRGRVHT----------EL-----RVQSRKNFDPAGNRIWDLRRCKRD- 164
CE RG + + EL RVQ R D W+L+
Sbjct: 664 NFPACEECNCDPRGVIASFAGCGSVPAGELCQCKDRVQGRICND-CKPLFWNLQEYNPSG 722
Query: 165 --------TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 213
LG G+ N + G+C CK V +CD C Y GC +C
Sbjct: 723 CQECSCNLAGTLGGLGACNTR---SGQCTCKMNVGERQCDECQDGFYKLESQNLFGCAAC 779
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+ GS+ N NCD GQC C VEG +C
Sbjct: 780 DCDIGGSIDN--NCDKRTGQCRCHSRVEGRRC 809
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 56/269 (20%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+ + C +D E+ + GG C +CQ + +G NC KC+ +Y+ G
Sbjct: 324 CNCHNHTTECEYDAEIDEKHLSLDIHGLYEGGGVCKNCQHNTEGINCNKCKPTFYRPYGK 383
Query: 52 NF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C CNCN S C E GRC+C+ CD C ++D+ CK C
Sbjct: 384 TWDELDVCQPCNCNLHYSTG-NCEEETGRCECRSEFNPPNCDSCAYGYFDY--PNCKPCT 440
Query: 106 CNPAGSVKNTPNCDSVKGQC--------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
CN G+ +C G C +S ++ + G E
Sbjct: 441 CNLNGT--EGQHCTPTDGMCPCKYNYAGKSCEMCADGYYSPE------------------ 480
Query: 158 LRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
+ C+ ++ GS++ C+ E G C CK +G C++C+ +Y++ CK C C+
Sbjct: 481 CKNCECNSV-----GSVSQVCDKESGNCTCKSKYSGRTCNQCEAGYYEY--PTCKQCNCD 533
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+G+ N CD V GQC CK G +C
Sbjct: 534 VSGTEPNV--CDDVTGQCVCKPGFGGVRC 560
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 85/197 (43%), Gaps = 26/197 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCN-SEGRCQCK 78
G CL C + G C C ++ GD CTAC C+ G +C+ S G C C+
Sbjct: 1931 GDCLKCVNNTSGAACNLCAPGFF---GDAVFSKNCTACVCDEYGME--RCDPSTGTCICR 1985
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
PGV G C+ C +H+ GC C+C G + CD G+C+ A
Sbjct: 1986 PGVIGSSCNLCKPDHWGLNSGQGCTPCDC---GIASESSQCDDNNGKCKCA--------- 2033
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
+ + + D W+ + D G S+ CN+ G+C+C PGV G+KCDR
Sbjct: 2034 ---KGVTGMHCDQCAAGYWNYSKDGCDRCNCNKGYSVGFMCNATGQCECLPGVVGEKCDR 2090
Query: 198 CDVNHYDFGEAGCKSCE 214
C + GC C+
Sbjct: 2091 CPERWVLIPQEGCLECD 2107
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN--LQCNSE-GRCQCKPG 80
G C+ C + +G NC++C+ + C CNCNP+G +N LQC ++ G C CK
Sbjct: 1435 GECI-CPKNVEGENCDRCKPYTFNFDVQRGCDDCNCNPMGVINDQLQCEADSGNCPCKDN 1493
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ G CD C+ HYDF + C C C+ G+ + CD QC
Sbjct: 1494 IIGRTCDHCEPGHYDFPD--CVQCSCDLNGTTDDV--CDQNTAQC 1534
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 95/241 (39%), Gaps = 69/241 (28%)
Query: 38 CEKCRDNYYQKSGDN--FC---------------TACNCNPIGSLNLQCNSEG-RCQCKP 79
EKC N+Y S + FC +C C+ +GS L+CN+ G +C CK
Sbjct: 1341 IEKCALNHYHISSNETGFCHDAMFSITSEYNSGALSCFCDFMGSTELECNTFGGQCPCKE 1400
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G C C +Y F C+ C C P+ ++ CD G+C
Sbjct: 1401 NVIGRTCSACKTGYYGF--PNCRPCHC-PSTAI-----CDD-NGEC-------------- 1437
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTY--------------PLGHGGSLNLQCNSE-GRC 184
P + RCK T+ P+G LQC ++ G C
Sbjct: 1438 --------ICPKNVEGENCDRCKPYTFNFDVQRGCDDCNCNPMGVIND-QLQCEADSGNC 1488
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
CK + G CD C+ HYDF + C C C+ G+ + CD QC CK +V+G
Sbjct: 1489 PCKDNIIGRTCDHCEPGHYDFPD--CVQCSCDLNGTTDDV--CDQNTAQCYCKKHVKGQA 1544
Query: 245 C 245
C
Sbjct: 1545 C 1545
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 107/270 (39%), Gaps = 57/270 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS----------- 49
C CNG S C + G CL+C + G +CE+C Y+ +
Sbjct: 1804 CQCNGHSKECDVNT---------GICLECTDNTMGDHCEQCIPGYHGDATVGTPKDCLIC 1854
Query: 50 -------GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 99
+NF C+ + GSL C CKPG G +C+ C +Y E
Sbjct: 1855 ACPMPYPSNNFAVGCDLSGNGSLI-------SCVCKPGYGGARCEFCAAGYYGVPEEIGD 1907
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL- 158
CK C C+ + + +CDS+ G C ++ G + + F G+ ++
Sbjct: 1908 YCKPCNCSGNINTDDPGSCDSITGDCLKCVNNTSG---AACNLCAPGFF---GDAVFSKN 1961
Query: 159 -RRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCEC 215
C D Y + +C+ S G C C+PGV G C+ C +H+ GC C+C
Sbjct: 1962 CTACVCDEYGME-------RCDPSTGTCICRPGVIGSSCNLCKPDHWGLNSGQGCTPCDC 2014
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G + CD G+C+C V G C
Sbjct: 2015 ---GIASESSQCDDNNGKCKCAKGVTGMHC 2041
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 31/189 (16%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL-----QCNSEGRCQCKPGVTG 83
C+ + DG C+KC++ +Y C CNC+P G + + CQCK V G
Sbjct: 646 CKPNFDGIKCDKCKEQFYNFPA---CEECNCDPRGVIASFAGCGSVPAGELCQCKDRVQG 702
Query: 84 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE- 139
C+ C ++ E +GC+ C CN AG++ C++ GQC + +++ R E
Sbjct: 703 RICNDCKPLFWNLQEYNPSGCQECSCNLAGTLGGLGACNTRSGQC-TCKMNVGERQCDEC 761
Query: 140 ----LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDK 194
+++S+ F A C D GGS++ C+ G+C+C V G +
Sbjct: 762 QDGFYKLESQNLFGCAA--------CDCDI-----GGSIDNNCDKRTGQCRCHSRVEGRR 808
Query: 195 CDRCDVNHY 203
CDR HY
Sbjct: 809 CDRPIRAHY 817
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
GG C C+ + G C C+ YY G C C+C P ++ C+ G C C V
Sbjct: 1392 FGGQC-PCKENVIGRTCSACKTGYY---GFPNCRPCHC-PSTAI---CDDNGECICPKNV 1443
Query: 82 TGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G+ CDRC ++F + GC C CNP G + + C++ G C
Sbjct: 1444 EGENCDRCKPYTFNFDVQRGCDDCNCNPMGVINDQLQCEADSGNC 1488
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C GVTG CD+C ++++ + GC C CN SV N GQCEC V
Sbjct: 2028 GKCKCAKGVTGMHCDQCAAGYWNYSKDGCDRCNCNKGYSVGFMCNA---TGQCECLPGVV 2084
Query: 242 GAQC 245
G +C
Sbjct: 2085 GEKC 2088
>gi|4732099|gb|AAD28603.1|AF128866_1 netrin-3 precursor [Mus musculus]
Length = 580
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRG 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC F ++ C
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG---FQQSRSPVAPCVKTPVP 427
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNF 148
T V+ Q CES +RG L+ RK++
Sbjct: 428 GPTEESSPVEPQDCESHCRPARGSYRISLKKFCRKDY 464
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSG---DNF 53
C CNG ++RC D HG DCQ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDT-------HGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHA 307
Query: 54 CTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA--- 99
C AC+CN N++ S G C C+ G C C Y D G
Sbjct: 308 CLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSD 367
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
GC++C+C+P G+ T C+ GQC
Sbjct: 368 RRGCRACDCHPVGAAGKT--CNQTTGQC 393
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC++C+C+P G+ T C+ GQC CKD V G C
Sbjct: 370 GCRACDCHPVGAAGKT--CNQTTGQCPCKDGVTGLTC 404
>gi|5326872|gb|AAD42078.1|AF149094_1 axon guidance cue netrin-3 [Mus musculus]
Length = 580
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC F ++ C
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG---FQQSRSPVAPCVKTPVP 427
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNF 148
T V+ Q CES +RG L+ RK++
Sbjct: 428 GPTEESSPVEPQDCESHCRPARGSYRISLKKFCRKDY 464
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSG---DNF 53
C CNG ++RC D HG DCQ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDT-------HGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHA 307
Query: 54 CTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA--- 99
C AC+CN N++ S G C C+ G C C Y D G
Sbjct: 308 CLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSD 367
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 368 RRACRACDCHPVGAAGKT--CNQTTGQC 393
>gi|148235429|ref|NP_001088164.1| laminin, beta 2 (laminin S) precursor [Xenopus laevis]
gi|54035234|gb|AAH84071.1| LOC494988 protein [Xenopus laevis]
Length = 1783
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 38/233 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN S +C FD +Y TG+ GG C DC + G NCE C+ +Y+ +
Sbjct: 335 CNCNNHSRKCHFDMAVYLSTGNVSGGVCDDCVHNTMGRNCEFCKPFFYKDPSKDIRDSAV 394
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C+C+P GSL+ C+++ G+C+CK G +CDRC + G
Sbjct: 395 CKDCDCDPDGSLDGGLCDAQDSPALGLIAGQCRCKDYAEGPRCDRCKTGFFGLSANNFQG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+C+P G++ CD + G C + + GR Q F + + R
Sbjct: 455 CQRCQCDPRGTISGGAQCDPISGDCFCKRFVT-GRTCN----QCLPEFWALSHDLHGCRS 509
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD-------RCDVNHYDF 205
C D GG+ + C E G+C+C+ + G +C+ R ++HY +
Sbjct: 510 CDCDV-----GGAWDNHCAMETGQCRCRSHMVGRQCNQVKSGYYRIHLDHYTY 557
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C+C+P GSL+ +C+ G +CQCK V G +CDRC Y FG GC+ CECN GS +N
Sbjct: 768 CSCDPQGSLSSECDPNGGQCQCKTNVIGQRCDRCAPGTYGFGPTGCRVCECNKEGSSQNF 827
Query: 116 PNCDSVKGQC 125
CD GQC
Sbjct: 828 --CDQRTGQC 835
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 25/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE---------GR 74
G CL C+ + +G CE CR +Y + + C C CN +G+ QC S G+
Sbjct: 990 GQCLKCKFNTEGRFCEHCRIGFYGDASRHNCRKCACNYLGTEPSQCPSREDCMCDRTSGQ 1049
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C P V G CDRC N ++ GC+ C C+P S + C+ G+C+ +
Sbjct: 1050 CHCLPNVMGQNCDRCSPNFWNLASGKGCQPCNCDPNHSF--SLACNEFTGKCQ-CRPGFG 1106
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
G T+ ++N+ GN R C D G QCN + G C C+ GV+G
Sbjct: 1107 GLTCTD----CQENY--WGNPNIQCRACDCD-----RRGIKAAQCNRATGHCSCRAGVSG 1155
Query: 193 DKCDRC 198
+CD+C
Sbjct: 1156 VRCDQC 1161
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 105/277 (37%), Gaps = 60/277 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CN S C G CL+C+ G CE+C ++
Sbjct: 862 CQCNSHSEEC---------DQRTGACLNCRDHSTGDRCERCIAGFFGNPVLGSGDHCRPC 912
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGEA 99
SG +F +C +P + C CK G +G +CD C + F
Sbjct: 913 PCPEGPTSGRHFAASCQQDPRSRQVI-------CNCKQGYSGVRCDECSPGFFGNPFQTG 965
Query: 100 G-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
G C C+CN + + CD GQC + ++ GR R+ F +R +
Sbjct: 966 GRCLLCQCNNNIDMTDIGACDRRSGQCLKCKFNTEGRFCEHCRI----GFYGDASR-HNC 1020
Query: 159 RRCKRDTYPLGHGGSLNLQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA- 208
R+C + G+ QC S G+C C P V G CDRC N ++
Sbjct: 1021 RKCA-----CNYLGTEPSQCPSREDCMCDRTSGQCHCLPNVMGQNCDRCSPNFWNLASGK 1075
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P S + C+ G+C+C+ G C
Sbjct: 1076 GCQPCNCDPNHSF--SLACNEFTGKCQCRPGFGGLTC 1110
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 93/248 (37%), Gaps = 59/248 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC------- 75
+C+ G C++C ++ G+ F C C CN N+ G C
Sbjct: 940 NCKQGYSGVRCDECSPGFF---GNPFQTGGRCLLCQCNN----NIDMTDIGACDRRSGQC 992
Query: 76 -QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNT-PN-----CDSVKGQCES 127
+CK G C+ C + Y D C+ C CN G+ + P+ CD GQC
Sbjct: 993 LKCKFNTEGRFCEHCRIGFYGDASRHNCRKCACNYLGTEPSQCPSREDCMCDRTSGQC-- 1050
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNLQC 178
H V +N D W+L G G S +L C
Sbjct: 1051 ---------HCLPNVMG-QNCDRCSPNFWNLAS--------GKGCQPCNCDPNHSFSLAC 1092
Query: 179 NS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
N G+CQC+PG G C C N++ C++C+C+ G C+ G C C+
Sbjct: 1093 NEFTGKCQCRPGFGGLTCTDCQENYWGNPNIQCRACDCDRRGI--KAAQCNRATGHCSCR 1150
Query: 238 DNVEGAQC 245
V G +C
Sbjct: 1151 AGVSGVRC 1158
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 63/158 (39%), Gaps = 43/158 (27%)
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G C C+P GS+ + CD GQC Q + N G R
Sbjct: 764 GALPCSCDPQGSL--SSECDPNGGQC-----------------QCKTNV--IGQRC---D 799
Query: 160 RCKRDTYPLGHGGSLNLQCNSE-----------GRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC TY G G +CN E G+C C+ G G +CDRC H+ F
Sbjct: 800 RCAPGTYGFGPTGCRVCECNKEGSSQNFCDQRTGQCPCRQGAFGSRCDRCQPGHWGF--P 857
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
C+ C+CN ++ CD G C C+D+ G +C
Sbjct: 858 NCRQCQCN-----SHSEECDQRTGACLNCRDHSTGDRC 890
>gi|341896986|gb|EGT52921.1| hypothetical protein CAEBREN_09948 [Caenorhabditis brenneri]
Length = 612
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKC-----RDNYYQKSGDNF 53
CNCN + RC FD EL+ +G+ GG CL+C+ + G NC C RD +
Sbjct: 347 CNCNQHAKRCRFDSELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTTLPMTHRKA 406
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C +C C+P+GSL CN S G+C CKPGVTG C+RC
Sbjct: 407 CKSCGCHPVGSLGKSCNQSSGQCVCKPGVTGTTCNRC 443
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 63/154 (40%), Gaps = 44/154 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG ++RC FDK G + DC+ + G CE C+ +Y + + N
Sbjct: 291 CKCNGHASRCIFDK-------MGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANS 343
Query: 54 CTACNCNPIGS--------------------LNLQCNSEGR--CQCKPGVTGDKCDRCDV 91
C ACNCN LN + N+ GR CKPG D +
Sbjct: 344 CVACNCNQHAKRCRFDSELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTT--LPM 401
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
H CKSC C+P GS+ + C+ GQC
Sbjct: 402 TH----RKACKSCGCHPVGSLGKS--CNQSSGQC 429
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 67/181 (37%), Gaps = 60/181 (33%)
Query: 75 CQCKPGVTGDKCDRCDVNHYD--FGEA------GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C CK G +C+ C HYD +G A C +C CN
Sbjct: 310 CDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCN------------------- 350
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR--C 184
Q + R R +EL F +GNR G LN + N+ GR
Sbjct: 351 --QHAKRCRFDSEL-------FRLSGNR--------------SGGVCLNCRHNTAGRNCH 387
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
CKPG D + H CKSC C+P GS+ + C+ GQC CK V G
Sbjct: 388 LCKPGFVRDTT--LPMTH----RKACKSCGCHPVGSLGKS--CNQSSGQCVCKPGVTGTT 439
Query: 245 C 245
C
Sbjct: 440 C 440
>gi|281306763|ref|NP_446184.1| netrin 3 precursor [Rattus norvegicus]
gi|149051997|gb|EDM03814.1| netrin 2-like (chicken) [Rattus norvegicus]
Length = 580
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC F ++ C
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG---FQQSRSPVAPCVKTPVP 427
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNF 148
T V+ Q CES +RG L+ RK++
Sbjct: 428 GPTEESSPVEPQDCESHCRPARGSYRISLKKFCRKDY 464
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSG---DNF 53
C CNG S+RC D HG DCQ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHSSRCLMDT-------HGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHA 307
Query: 54 CTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA--- 99
C AC+CN N++ S G C C+ G C C Y D G
Sbjct: 308 CLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSD 367
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 368 RRACRACDCHPVGAAGKT--CNQTTGQC 393
>gi|6754904|ref|NP_035077.1| netrin-3 precursor [Mus musculus]
gi|56404670|sp|Q9R1A3.1|NET3_MOUSE RecName: Full=Netrin-3; AltName: Full=Netrin-2-like protein; Flags:
Precursor
gi|5107302|gb|AAD40063.1|AF152418_1 netrin-3 [Mus musculus]
gi|26327107|dbj|BAC27297.1| unnamed protein product [Mus musculus]
gi|62871707|gb|AAH94362.1| Netrin 3 [Mus musculus]
gi|74202588|dbj|BAE24860.1| unnamed protein product [Mus musculus]
gi|148690352|gb|EDL22299.1| netrin 2-like (chicken), isoform CRA_a [Mus musculus]
Length = 580
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC F ++ C
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG---FQQSRSPVAPCVKTPVP 427
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNF 148
T V+ Q CES +RG L+ RK++
Sbjct: 428 GPTEESSPVEPQDCESHCRPARGSYRISLKKFCRKDY 464
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSG---DNF 53
C CNG ++RC D HG DCQ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDT-------HGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHA 307
Query: 54 CTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA--- 99
C AC+CN N++ S G C C+ G C C Y D G
Sbjct: 308 CLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSD 367
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 368 RRACRACDCHPVGAAGKT--CNQTTGQC 393
>gi|348513005|ref|XP_003444033.1| PREDICTED: netrin-4-like [Oreochromis niloticus]
Length = 638
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 20/139 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CNG + C F + L+ TG GG C DC+ + +G +C+ C+ +Y+ K +
Sbjct: 342 CKCNGHARSCHFSRGLWLATGRRSGGVCDDCRHNTEGRHCQSCKKGFYRDPSRPKMAPDS 401
Query: 54 CTACNCNPIGSLNLQCNS-----EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
C AC+C+P+GS++ ++ G C CKPGV G CD C ++ E GC+ C+C
Sbjct: 402 CKACSCHPVGSVHSGGSTLCDPNTGECTCKPGVGGPYCDSCMTGYWGLNEYGCRPCDC-- 459
Query: 109 AGSVKNTPNCDSVKGQCES 127
+CD G C S
Sbjct: 460 ------VGDCDPYTGDCIS 472
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 86/201 (42%), Gaps = 36/201 (17%)
Query: 63 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF------GEAG----CKSCECNPAGSV 112
G+ N+ G+C C+ GD C+RC + D G G C+ C+CN
Sbjct: 291 GTQNISNMVHGKCACRHNTAGDHCERCAPLYNDQPWQAANGITGTAHECQKCKCN----- 345
Query: 113 KNTPNCDSVKGQCESAQLSSRG-----RVHTELRV-QS-RKNF--DPAGNRIWDLRRCKR 163
+ +C +G + S G R +TE R QS +K F DP+ ++ CK
Sbjct: 346 GHARSCHFSRGLWLATGRRSGGVCDDCRHNTEGRHCQSCKKGFYRDPSRPKM-APDSCKA 404
Query: 164 -DTYPLG--HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
+P+G H G L + G C CKPGV G CD C ++ E GC+ C+C
Sbjct: 405 CSCHPVGSVHSGGSTLCDPNTGECTCKPGVGGPYCDSCMTGYWGLNEYGCRPCDC----- 459
Query: 221 VKNTPNCDSVKGQCECKDNVE 241
+CD G C +VE
Sbjct: 460 ---VGDCDPYTGDCISGSDVE 477
>gi|194224618|ref|XP_001915033.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Equus
caballus]
Length = 3585
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 96/216 (44%), Gaps = 35/216 (16%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL C+ + DGP+C++CR ++ G C AC C+P G+L+ C G C C+PG
Sbjct: 536 AGRCL-CRPEFDGPHCDRCRPGHH---GYPDCRACACDPRGALDQLCGVGGVCHCRPGYM 591
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F + C C CN GS+ + CD GQC S R RV T LR
Sbjct: 592 GTTCQECSPGFHGFPD--CAPCHCNADGSLHAS--CDPRSGQC-----SCRPRV-TGLRC 641
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G ++ ++ C C+ V G CDR
Sbjct: 642 DTCVPGAYNFP----------YCEAGSCHPAGLAPAVP---EAQAPCMCRAHVEGPSCDR 688
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSV 230
C + + GC C C+P G++ C V
Sbjct: 689 CKPGFWGLSPSTPEGCTRCSCDPRGTLGGVAECQLV 724
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 94/226 (41%), Gaps = 44/226 (19%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ + G +CE C +Y C C C+ G + C+ + G+CQC+ G G CD
Sbjct: 451 CKPNFQGTHCELCAPGFYGPG----CQPCRCSSPGVADGDCDRDSGQCQCRTGFEGAACD 506
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC ++ F C+ C C+P+G++ CD G+C R
Sbjct: 507 RCAPGYFHF--PLCRLCGCSPSGTLPE--GCDEA-GRC-----------------LCRPE 544
Query: 148 FD--------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
FD P + D R C D G+L+ C G C C+PG G C C
Sbjct: 545 FDGPHCDRCRPGHHGYPDCRACACDPR-----GALDQLCGVGGVCHCRPGYMGTTCQECS 599
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ F + C C CN GS+ + CD GQC C+ V G +C
Sbjct: 600 PGFHGFPD--CAPCHCNADGSLHAS--CDPRSGQCSCRPRVTGLRC 641
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 98/260 (37%), Gaps = 62/260 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+ ++ C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 293 CNCHSHAHDCYYDPEVDRRNASQNQDNVYQGGGVCIDCQHHTTGINCERCLPGFYRAPDQ 352
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C CNC + + GRC C+P TG++CD C F C
Sbjct: 353 PLDSPYACRRCNCESDFTDGTCEDLTGRCYCRPNFTGERCDACAEGFTGFP-------LC 405
Query: 107 NPAGSVKNTPNCDSV-KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
+P S N + GQ + S+ G GN C++D
Sbjct: 406 HPVASFPNDTGEQVLPAGQIVNCDCSAAGT---------------QGN------ACRKDP 444
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
GRC CKP G C+ C Y GC+ C C+ G
Sbjct: 445 --------------RVGRCVCKPNFQGTHCELCAPGFYG---PGCQPCRCSSPGVADG-- 485
Query: 226 NCDSVKGQCECKDNVEGAQC 245
+CD GQC+C+ EGA C
Sbjct: 486 DCDRDSGQCQCRTGFEGAAC 505
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 113/264 (42%), Gaps = 44/264 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G C+ CQ + +G +CE+C+ + + ++ C +C
Sbjct: 1806 CQCHGHSDRCLPGS---------GVCVGCQHNTEGDHCEQCQAGFVRSGSEDPAAPCVSC 1856
Query: 58 NCN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNP 108
C P + + C G +C CKPG G C+RC ++ + C+ C+C+
Sbjct: 1857 PCPLSVPSNNFAVGCILRGGRTQCLCKPGYAGASCERCAPGYFGNPLVLGSSCQPCDCSG 1916
Query: 109 AGSVKNT-PNCDSVKGQCESAQLSSRG--RVHTELRVQS-RKNFDPAGNRIWDLRRCKR- 163
G +CD + G C RG R T R +S F GN + C R
Sbjct: 1917 NGDPNMLFSDCDPLTGTC-------RGCLRHTTGPRCESCAPGF--YGNALLP-GNCSRC 1966
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
D P G C+ + G+C CK GVTG CDRC H FG AGC+ C G
Sbjct: 1967 DCSPCG-----TEACDPQSGQCLCKAGVTGPSCDRCQEGH--FGFAGCRGCRPCACGPAA 2019
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2020 EGSECHPQSGQCHCRPGTGGLQCR 2043
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 80/210 (38%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + C+ C+C
Sbjct: 1914 CSGNGDPNMLFSDCDPLT-----GTCRGCLRHTTGPRCESCAPGFYGNALLPGNCSRCDC 1968
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
+P G+ S G+C CK GVTG CDRC H+ F G GC+ C C PA C
Sbjct: 1969 SPCGTEACDPQS-GQCLCKAGVTGPSCDRCQEGHFGFAGCRGCRPCACGPAAEGSE---C 2024
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G QC
Sbjct: 2025 HPQSGQCHCR----------------------PGTGGLQCRECAPGHWGLPEQGCRRCQC 2062
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2063 RGGHCDLHTGRCTCPPGLSGERCDTCSHQH 2092
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 22/237 (9%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP 79
G GG C C+ G C++C ++ G C C+CN GSL+ C+ G+C C+P
Sbjct: 579 GVGGVC-HCRPGYMGTTCQECSPGFH---GFPDCAPCHCNADGSLHASCDPRSGQCSCRP 634
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS-------VKG-QCESAQLS 131
VTG +CD C Y+F C++ C+PAG P + V+G C+ +
Sbjct: 635 RVTGLRCDTCVPGAYNFPY--CEAGSCHPAGLAPAVPEAQAPCMCRAHVEGPSCDRCKPG 692
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT 191
G + +R + DP G + + C+ PL G + +L + KP V
Sbjct: 693 FWGLSPSTPEGCTRCSCDPRGT-LGGVAECQL-VNPLLPGTTFSLCVKGSPQDLRKPHVC 750
Query: 192 GDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C + A C+SC C+ G++ C+ G C C+ N +G C
Sbjct: 751 GXTXTACKDGFFGLDRADYFVCRSCRCDVGGALGQ--GCEPRTGACRCRPNTQGLTC 805
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ + C G +C C+ V G C RC ++ F C+ C+C+ G +
Sbjct: 1384 CGCHEVGATSPTCEPFGGQCPCRAYVIGRDCSRCATGYWGF--PNCRPCDCS--GRL--- 1436
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC P D C+ T+ PL
Sbjct: 1437 --CDELTGQCTC----------------------PPRTVPPDCIICQPQTFGCHPLVGCE 1472
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P V G +CD C + G C C+C+ AGS
Sbjct: 1473 ECNCSGPGVQELTDPTCDTDSGQCKCRPNVAGRRCDTCAPGFH--GYPACHPCDCHTAGS 1530
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1531 APGV--CDPLTGQCYCKENVQGPRC 1553
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 81/204 (39%), Gaps = 49/204 (24%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C C+ G
Sbjct: 428 CDCSAAGTQGNACRKDPRVGRCVCKPNFQGTHCELCAPGFYG---PGCQPCRCSSPGVAD 484
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPL 168
+CD GQC Q R F+ A C R +PL
Sbjct: 485 G--DCDRDSGQC-----------------QCRTGFEGAA--------CDRCAPGYFHFPL 517
Query: 169 ------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
G+L C+ GRC C+P G CDRC H+ + + C++C C+P G++
Sbjct: 518 CRLCGCSPSGTLPEGCDEAGRCLCRPEFDGPHCDRCRPGHHGYPD--CRACACDPRGALD 575
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
C V G C C+ G C+
Sbjct: 576 QL--C-GVGGVCHCRPGYMGTTCQ 596
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 88/226 (38%), Gaps = 31/226 (13%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS----EGRCQ-CKPGV 81
C+ G +CE+C Y+ + C C+C+ G N+ + G C+ C
Sbjct: 1882 CKPGYAGASCERCAPGYFGNPLVLGSSCQPCDCSGNGDPNMLFSDCDPLTGTCRGCLRHT 1941
Query: 82 TGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
TG +C+ C Y C C+C+P G T CD GQC L G
Sbjct: 1942 TGPRCESCAPGFYGNALLPGNCSRCDCSPCG----TEACDPQSGQC----LCKAGVTGPS 1993
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
+F AG R R C P G + Q G+C C+PG G +C C
Sbjct: 1994 CDRCQEGHFGFAGCR--GCRPCA--CGPAAEGSECHPQ---SGQCHCRPGTGGLQCRECA 2046
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
H+ E GC+ C+C +CD G+C C + G +C
Sbjct: 2047 PGHWGLPEQGCRRCQCRGG-------HCDLHTGRCTCPPGLSGERC 2085
>gi|386769627|ref|NP_476790.3| wing blister, isoform G [Drosophila melanogaster]
gi|383291494|gb|AAF53381.3| wing blister, isoform G [Drosophila melanogaster]
Length = 3001
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C + G C+KCR ++ + C C C+P GS +CN G+C CK GV G C+
Sbjct: 1171 CLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIGVGGQHCN 1230
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGR-----VHTELR 141
C + F GC+ C C G V CD G+C + + RG V
Sbjct: 1231 ECTEGFFGFSTEGCQRCSACRSEGQV-----CDPHNGRCICPKFT-RGLGCGQCVPGTWG 1284
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
Q+R R C+ D H GS+ QC++ +G+CQC+ G +G KCD C +
Sbjct: 1285 WQARLG----------CRECECD-----HIGSIGQQCSTGDGQCQCREGYSGRKCDTCAI 1329
Query: 201 NHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
++ + E C+ C C+ GS + CDS GQC CK V G +C
Sbjct: 1330 GYFGYPE--CRRCGCDAEGSFTQADGSIACDS-NGQCPCKSLVVGLKC 1374
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 110/287 (38%), Gaps = 84/287 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG SN C G+C DC + G CE+C+ YY
Sbjct: 852 CPCNGHSNSCDL---------QSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTPNDCKRC 902
Query: 47 ----QKSGDNFCTACNCNPIGSLNLQCNSEGR-------CQCKPGVTGDKCDRCDVNHYD 95
+ +NF +C ++L E QC G TGD C CD ++
Sbjct: 903 ACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFG 962
Query: 96 FGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
SC+ C+ AG C+ G+C + + ++ G
Sbjct: 963 NPRQPGSSCQRCDCAGG-----PCNVTTGECITCRGNTEG-------------------- 997
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCN----------------SEGRCQCKPGVTGDKCDRC 198
W RCK LG+ G + C+ ++G+C CKP G KCD C
Sbjct: 998 -WHCERCK-----LGYWGDPAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDEC 1051
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
DV + + E C SC C+P GS+ CD GQC CK+ V GA+C
Sbjct: 1052 DVGYANV-ELRCPSCNCDPLGSLVQD-RCDPHTGQCHCKEGVMGAKC 1096
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 29 CQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGD 84
C+ G CE+C+ Y+ + + C CNC+P G C+ E GRC C+ GVTG
Sbjct: 1742 CKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRCYCREGVTGL 1801
Query: 85 KCDRCDVNHYDFGEAGCKSCE 105
KCD+C + + GCK C+
Sbjct: 1802 KCDKCQAERHHLVDNGCKICD 1822
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
H G C+ C G C +C + C C C+ IGS+ QC++ +G+CQC+ G
Sbjct: 1260 HNGRCI-CPKFTRGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREG 1318
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQC 125
+G KCD C + ++ + E C+ C C+ GS + CDS GQC
Sbjct: 1319 YSGRKCDTCAIGYFGYPE--CRRCGCDAEGSFTQADGSIACDS-NGQC 1363
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C+CNG S+ C D+E G C +C+G+ G +C +C + +Y + + C AC C
Sbjct: 1670 CHCNGRSSDC--DRET-------GVCQNCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPC 1720
Query: 60 NPIGSLNLQ-----CNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAG 110
P + N + E C CKPG TG C+RC ++ + C+ C C+P G
Sbjct: 1721 -PETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDG 1779
Query: 111 SVKNTPNCDSVKGQC 125
T CD G+C
Sbjct: 1780 I--QTEGCDVETGRC 1792
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 70/196 (35%), Gaps = 71/196 (36%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGS 111
C C+C+ +GSL+ C+ G+C C VTG +CD+C H++ GC+ C C
Sbjct: 1147 CEECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRC----- 1201
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
DP G+R GH
Sbjct: 1202 -------------------------------------DPHGSR--------------GH- 1209
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDS 229
+CN G+C CK GV G C+ C + F GC+ C C G V CD
Sbjct: 1210 -----ECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQV-----CDP 1259
Query: 230 VKGQCECKDNVEGAQC 245
G+C C G C
Sbjct: 1260 HNGRCICPKFTRGLGC 1275
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C G + C +D L G C C + G CE C +Y++ C C
Sbjct: 452 CQCYGHAESCTYDPFL-----DKGICQSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPC 506
Query: 58 NCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
+CNP S C S+ G C C G G C+ C +Y CK CEC+ GS+ +T
Sbjct: 507 SCNPARSTG-GCQSDGGSCNCLEGFQGKNCEECAPGYYG---DDCKRCECDERGSLGSTG 562
Query: 117 NCDSV 121
+C V
Sbjct: 563 SCSGV 567
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 64/149 (42%), Gaps = 32/149 (21%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C +C G NCE+C YY GD+ C C C+ GSL + G CQCK V
Sbjct: 521 GGSC-NCLEGFQGKNCEECAPGYY---GDD-CKRCECDERGSLGSTGSCSGVCQCKLNVE 575
Query: 83 GDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C C ++D GC SC C+ V C SA+L +
Sbjct: 576 GSTCSECAPGYFDLSAENAEGCTSCWCS------------GVSQTCHSAKLQT------- 616
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
L ++ ++ +I D++R K + P+
Sbjct: 617 LAFETLNDW-----KITDIQRVKPISIPV 640
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
E C CKPG TG C+RC ++ + C+ C C+P G T CD G+C C
Sbjct: 1737 EVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGI--QTEGCDVETGRCYC 1794
Query: 237 KDNVEGAQC 245
++ V G +C
Sbjct: 1795 REGVTGLKC 1803
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C C G G C+ C +Y CK CEC+ GS+ +T +C V C+CK NVE
Sbjct: 522 GSCNCLEGFQGKNCEECAPGYYG---DDCKRCECDERGSLGSTGSCSGV---CQCKLNVE 575
Query: 242 GAQC 245
G+ C
Sbjct: 576 GSTC 579
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
GRC C+ GVTG KCD+C + + GCK C+
Sbjct: 1790 GRCYCREGVTGLKCDKCQAERHHLVDNGCKICD 1822
>gi|363738709|ref|XP_003642058.1| PREDICTED: netrin-4-like [Gallus gallus]
Length = 632
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
C C+ ++ C FD ++ +G GG C +C+ + +G C++C+ YY+ G
Sbjct: 329 CRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMSSAEV 388
Query: 54 CTACNCNPIGSLNLQCNSEGRCQ-------CKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C P+GS N + RC CKPGV G CDRC + ++ FGE GC+ C+C
Sbjct: 389 CKPCSCQPMGSANATFSRSWRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGENGCRPCDC 448
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 88/245 (35%), Gaps = 90/245 (36%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH-----GGHCLDCQGDRDGPNCEKCRDNY---YQKSGD- 51
C CNG + C EL NRTG G C+ C+ + G +CEKC Y K GD
Sbjct: 264 CFCNGHAEEC----ELANRTGEVENVVHGKCV-CRHNTAGDHCEKCAPLYNDQPWKPGDG 318
Query: 52 -----NFCTACNCNPIGS-----LNLQCNSEGRC-----QCKPGVTGDKCDRCDVNHY-D 95
N C C C+ L++ S R CK G +C RC +Y D
Sbjct: 319 KTGAPNECKKCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRD 378
Query: 96 FGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
G+ CK C C P GS T
Sbjct: 379 RGKPMSSAEVCKPCSCQPMGSANAT----------------------------------- 403
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
+R W RC T G C CKPGV G CDRC + ++ FGE GC
Sbjct: 404 -FSRSW---RCHPKT----------------GFCYCKPGVAGPNCDRCLMGYWGFGENGC 443
Query: 211 KSCEC 215
+ C+C
Sbjct: 444 RPCDC 448
>gi|443720790|gb|ELU10388.1| hypothetical protein CAPTEDRAFT_219723 [Capitella teleta]
Length = 2631
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 100/229 (43%), Gaps = 49/229 (21%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 93
G NC +C Y + + C C C+PIGS + C+S G+C C+PGV+G CD C +H
Sbjct: 704 GRNCAECESGY--GNVELGCPHCKCDPIGSASQNCDSITGQCPCRPGVSGVHCDHCMADH 761
Query: 94 YDFGEAGCKSC-ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
+ F GC+ C +C G V CD G C P
Sbjct: 762 HGFSTDGCQECGKCPLPGQV-----CDPEDGDCVC----------------------PVN 794
Query: 153 NRIWDLRRCKRDT--YPLGHG---------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 200
+ RC + Y HG S +LQC+ E G+C+C+ G G KCD+C
Sbjct: 795 TEGSECERCSVNAWGYDAQHGCKMCNCTRLSSSSLQCDLESGQCECRSGYRGQKCDQCPA 854
Query: 201 NHYDFGEAGCKSCECNPAGSVKN---TPNCD-SVKGQCECKDNVEGAQC 245
+DF C C C+P G N T C SV G C CKD V G +C
Sbjct: 855 GFFDF--PFCAPCGCDPTGVDLNQCETETCGCSVDGHCPCKDFVIGEKC 901
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 110/291 (37%), Gaps = 74/291 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG + C + G C DCQ + G CE C +Y
Sbjct: 587 CRCNGHAQSC---------DPYTGECFDCQHNTQGGFCEDCAFGFYGDATEGSHDACKPC 637
Query: 47 -------------------QKSGDNFCTACN----------CNPIGSLNLQCNSE-GRCQ 76
Q S D C C C+P GS C+ E G+C
Sbjct: 638 ACPMVDAENNFAQGCIPSDQGSRDYMCIGCKMGFEGEFCERCDPKGSSGALCDRETGQCS 697
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
C P G C C+ + Y E GC C+C+P GS NCDS+ GQC S V
Sbjct: 698 CLPRFGGRNCAECE-SGYGNVELGCPHCKCDPIGSASQ--NCDSITGQCPCRPGVS--GV 752
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
H + + F G + C + P G + C+ E G C C G +C
Sbjct: 753 HCDHCMADHHGFSTDG-----CQECGKCPLP----GQV---CDPEDGDCVCPVNTEGSEC 800
Query: 196 DRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+RC VN + + + GCK C C S ++ CD GQCEC+ G +C
Sbjct: 801 ERCSVNAWGYDAQHGCKMCNCTRLSS--SSLQCDLESGQCECRSGYRGQKC 849
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 70/191 (36%), Gaps = 61/191 (31%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C + +G CE+C N + + C CNC + S +LQC+ E G+C+C+ G G KCD
Sbjct: 791 CPVNTEGSECERCSVNAWGYDAQHGCKMCNCTRLSSSSLQCDLESGQCECRSGYRGQKCD 850
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C +DF C C C+P G
Sbjct: 851 QCPAGFFDF--PFCAPCGCDPTGV------------------------------------ 872
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
DL +C+ +T C+ +G C CK V G+KC C +
Sbjct: 873 ---------DLNQCETET----------CGCSVDGHCPCKDFVIGEKCTDCAEGSFSLKS 913
Query: 208 ---AGCKSCEC 215
GC C C
Sbjct: 914 DNPKGCTDCFC 924
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 91/243 (37%), Gaps = 52/243 (21%)
Query: 44 NYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---- 99
+Y+Q + A +G S C C G TG C+RC + G
Sbjct: 523 HYHQTTVFLHDVAMETASMGGTGDVMTSVEMCHCPAGYTGSSCERCLAGYRRVGSVLLGG 582
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV-----------HTE--------- 139
C+ C CN + +CD G+C Q +++G TE
Sbjct: 583 TCEPCRCN-----GHAQSCDPYTGECFDCQHNTQGGFCEDCAFGFYGDATEGSHDACKPC 637
Query: 140 --LRVQSRKNF------DPAGNRIWDLRRCKRDTY--------PLGHGGSLNLQCNSE-G 182
V + NF G+R + CK P G G+L C+ E G
Sbjct: 638 ACPMVDAENNFAQGCIPSDQGSRDYMCIGCKMGFEGEFCERCDPKGSSGAL---CDRETG 694
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+C C P G C C+ + Y E GC C+C+P GS NCDS+ GQC C+ V G
Sbjct: 695 QCSCLPRFGGRNCAECE-SGYGNVELGCPHCKCDPIGSASQ--NCDSITGQCPCRPGVSG 751
Query: 243 AQC 245
C
Sbjct: 752 VHC 754
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 13/129 (10%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCTACNCNPIGSLNLQCNSEGR-CQ 76
GG C+DC+ +R G NCE C D +Y G + C C C G+ + + R +
Sbjct: 260 GGVCVDCKNNRMGINCELCEDGFYLPEGVDPRHPHSCRPCLCEGPGASGMCIKDDSRLIE 319
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC----ESAQ 129
V GD+CDRC Y+ + GC C C + N+ S + E
Sbjct: 320 GFANVRGDRCDRCMEGTYNLQMSNPEGCDQCFCFGITDMCNSSTLRSTEIHVMVGWEMTD 379
Query: 130 LSSRGRVHT 138
L G +HT
Sbjct: 380 LVGSGNLHT 388
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 56/135 (41%), Gaps = 23/135 (17%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG-SLNLQCNSEGRC------ 75
G C DCQ + G NCE C D YY S T +C+ G L L N+
Sbjct: 1137 GLSCQDCQHNTMGDNCEFCEDGYYGDS--TTATPSSCHRCGCPLTLTSNNFSPTCVHDVF 1194
Query: 76 -------QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C G G C+RC +Y A C+ C CNP GS CD +G
Sbjct: 1195 TGDYVCDACPEGYEGVHCERCQTGYYGSPSAYGSSCQPCACNPEGSRGEV--CD--EGIL 1250
Query: 126 ESAQLSSRGRVHTEL 140
+++ +++ V+ EL
Sbjct: 1251 KASNMTAHRDVYAEL 1265
>gi|328792823|ref|XP_394251.3| PREDICTED: laminin subunit alpha-5-like [Apis mellifera]
Length = 2278
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 70/133 (52%), Gaps = 20/133 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG SN C + G+CL+C+G+ GP C+ C D++Y + D C C C
Sbjct: 575 CQCNGRSNICNIET---------GYCLNCRGNTAGPRCDICADSFYGHA-DFGCKPCPCP 624
Query: 61 PI-----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AG-CKSCECNPAGSV 112
+ + N+E C CKPG TG KC+RC +Y F AG C CECNPAGS+
Sbjct: 625 QADKRFSSTCTILANAEPICVCKPGYTGRKCERCSAGYYGFPHLPAGKCTPCECNPAGSL 684
Query: 113 KNTPNCDSVKGQC 125
+ CD+ GQC
Sbjct: 685 ND--ECDTETGQC 695
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 45/232 (19%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ G C++C ++ G C C C+PIG+ N C+ + G+C CK GV G +CD
Sbjct: 81 CKPHVAGRQCDQCTVGFWGLPGGAGCAPCGCDPIGARNSSCHEAVGQCYCKQGVGGTRCD 140
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
C +Y F GC++C+ C G + CD G+C L+ H +
Sbjct: 141 TCLPGYYGFSSNGCQACDPCVRPGHI-----CDPDTGRCVCPTLTFGE--HCD------- 186
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHG----------GSLNLQCNSEGRCQCKPGVTGDKCD 196
RC+ ++ L G GS C+ G+C C+ G G +C+
Sbjct: 187 -------------RCRPGSWDLVAGVGCRPCACTLGSTKPHCDHRGQCPCRIGYAGLRCE 233
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSV---KNTPNCDSVKGQCECKDNVEGAQC 245
RC +Y G C+ C CN AG+ + T +CD +GQC CK+ G QC
Sbjct: 234 RCAKGYY--GYPRCRPCGCNAAGTTRCDRETCDCDD-EGQCPCKEYAVGRQC 282
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 93/193 (48%), Gaps = 24/193 (12%)
Query: 57 CNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKN 114
C CNP+GS++ C+ G+CQCKP V G +CD+C V + G AGC C C+P G+ +N
Sbjct: 60 CRCNPVGSVSSTCDIVTGQCQCKPHVAGRQCDQCTVGFWGLPGGAGCAPCGCDPIGA-RN 118
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
+ +C GQC Q R T L F G + D C R GH
Sbjct: 119 S-SCHEAVGQCYCKQGVGGTRCDTCL--PGYYGFSSNGCQACD--PCVRP----GH---- 165
Query: 175 NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKG 232
C+ + GRC C G+ CDRC +D GC+ C C GS K P+CD +G
Sbjct: 166 --ICDPDTGRCVCPTLTFGEHCDRCRPGSWDLVAGVGCRPCACT-LGSTK--PHCDH-RG 219
Query: 233 QCECKDNVEGAQC 245
QC C+ G +C
Sbjct: 220 QCPCRIGYAGLRC 232
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 175 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AG-CKSCECNPAGSVKNTPNCDSVK 231
+ N+E C CKPG TG KC+RC +Y F AG C CECNPAGS+ + CD+
Sbjct: 635 TILANAEPICVCKPGYTGRKCERCSAGYYGFPHLPAGKCTPCECNPAGSLND--ECDTET 692
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G C
Sbjct: 693 GQCRCRAGSTGRDC 706
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 29 CQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTG 83
C+ G CE+C YY +G CT C CNP GSLN +C++E G+C+C+ G TG
Sbjct: 646 CKPGYTGRKCERCSAGYYGFPHLPAGK--CTPCECNPAGSLNDECDTETGQCRCRAGSTG 703
Query: 84 DKCDRCDVNHYDFGEAGCKSC 104
C C + F C SC
Sbjct: 704 RDCSECTAYRHVFINNVCTSC 724
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 63/184 (34%), Gaps = 63/184 (34%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
G +C++CR + C C C +GS C+ G+C C+ G G +C+RC +Y
Sbjct: 182 GEHCDRCRPGSWDLVAGVGCRPCACT-LGSTKPHCDHRGQCPCRIGYAGLRCERCAKGYY 240
Query: 95 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
G C+ C CN AG+
Sbjct: 241 --GYPRCRPCGCNAAGTT------------------------------------------ 256
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG---EAGCK 211
RC R+T C+ EG+C CK G +CDRC + GC
Sbjct: 257 -----RCDRET----------CDCDDEGQCPCKEYAVGRQCDRCKEGTFGLAVDNPKGCT 301
Query: 212 SCEC 215
C C
Sbjct: 302 ECFC 305
>gi|340709968|ref|XP_003393571.1| PREDICTED: laminin subunit beta-1-like isoform 1 [Bombus
terrestris]
Length = 1774
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CN +N C FD+ +Y +G GG C DCQ + G NCE C+ +Y +
Sbjct: 339 CICNNHTNSCHFDEAVYENSGRVSGGVCDDCQHNTMGKNCELCKPFFYHDVTKDITHPEA 398
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C C+C+ GSL+ L GRC CK V G +CDRC ++F G
Sbjct: 399 CLPCDCDLGGSLDDGICDSITNPLTGGESGRCNCKANVEGRRCDRCKNGFWNFDPENPEG 458
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C CN G++ N C+ V G+C + + + L + DP G
Sbjct: 459 CQACTCNILGTIDNR-GCNMVTGECTCKRYVTARDCNQCLPEYWGLSEDPDG-------- 509
Query: 161 CKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
CK D P GGS C+ G+C+C+P V+G C++ + ++Y
Sbjct: 510 CKPCDCDP---GGSYENSCDVVTGQCRCRPHVSGRTCNQPEQSYY 551
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCKPG 80
G CL C + DG NC+ C+ +Y + + C C C+ +G+ + G+C C P
Sbjct: 995 GRCLQCLYNTDGANCQICKAGFYGNALEQDCEDCMCDVLGTDRNAGPCDHRTGQCSCLPH 1054
Query: 81 VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G CD C+ NH+ GC CEC+ GSV + C+ G CE R +
Sbjct: 1055 VIGLLCDSCEENHWRIASGQGCDPCECDAVGSVSD--RCNPYDGTCECRPGFGGRRCN-- 1110
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
+ + N+ GN + C D GS + QC+ E G C C G+ G+KCD+C
Sbjct: 1111 ---ECQTNY--WGNPNVECYPCDCDL-----TGSASQQCDRETGMCVCHKGIGGEKCDQC 1160
Query: 199 DVNHYDFGEAGCKSCECNPAG 219
D +Y G A +CNP G
Sbjct: 1161 DRGYY--GNAP----QCNPCG 1175
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 35 GPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-QCKPGVTGDKCDR 88
GP CE C +NY+ + C +CNCN L N GRC QC G C
Sbjct: 952 GPRCESCAENYFGNPEVPGGSCESCNCNNNTDLRRPGNCDPETGRCLQCLYNTDGANCQI 1011
Query: 89 CDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV-----HTELRV 142
C Y + E C+ C C+ G+ +N CD GQC S G + R+
Sbjct: 1012 CKAGFYGNALEQDCEDCMCDVLGTDRNAGPCDHRTGQC-SCLPHVIGLLCDSCEENHWRI 1070
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
S + DP C+ D GS++ +CN +G C+C+PG G +C+ C N
Sbjct: 1071 ASGQGCDP----------CECDAV-----GSVSDRCNPYDGTCECRPGFGGRRCNECQTN 1115
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ C C+C+ GS + CD G C C + G +C
Sbjct: 1116 YWGNPNVECYPCDCDLTGSA--SQQCDRETGMCVCHKGIGGEKC 1157
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 94/218 (43%), Gaps = 39/218 (17%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
YY G + +C CNP GS +L C N G C CK V G +CDRC Y F GC
Sbjct: 764 YYVYDGAH---SCECNPTGSHSLLCENYGGTCPCKQNVVGRRCDRCAPGTYGFSPEGCIP 820
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV--QSRKNFDPAGNRIWDLRRC 161
C+C+ G++ N CD G+C + R +T R Q F W+ C
Sbjct: 821 CDCDGVGALDNF--CDIETGRC-------KCRPNTYGRTCGQCEPGF-------WNFPHC 864
Query: 162 KRDTYPLGHGGSLNLQCNSE-GRC-QCKPGVTGDKCDRCDVNHYDFGEAG----CKSCEC 215
+R GH S C+S+ G C C+ TG CDRC +Y G C++C C
Sbjct: 865 QRCECN-GHAES----CDSKTGACINCRDYTTGHNCDRCIETYYGDPRIGVDIPCRACPC 919
Query: 216 ----NPAGSVKNTPNCDSVKGQ--CECKDNVEGAQCRS 247
+ S + + D V CEC D G +C S
Sbjct: 920 PGTIDSGHSYAESCSLDPVTHDVICECFDGYTGPRCES 957
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNP 217
C T PL G S GRC CK V G +CDRC ++F GC++C CN
Sbjct: 415 CDSITNPLTGGES--------GRCNCKANVEGRRCDRCKNGFWNFDPENPEGCQACTCNI 466
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ N C+ V G+C CK V C
Sbjct: 467 LGTIDNR-GCNMVTGECTCKRYVTARDC 493
>gi|395836742|ref|XP_003791309.1| PREDICTED: LOW QUALITY PROTEIN: netrin-1 [Otolemur garnettii]
Length = 944
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 681 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPISHRKA 740
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 741 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 799
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 800 TTVASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 835
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 625 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 677
Query: 54 CTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 678 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPISH 737
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 738 RKACKACDCHPVGAAGKT--CNQTTGQC 763
>gi|308510879|ref|XP_003117622.1| CRE-UNC-6 protein [Caenorhabditis remanei]
gi|308238268|gb|EFO82220.1| CRE-UNC-6 protein [Caenorhabditis remanei]
Length = 612
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC FD EL+ +G+ GG CL+C+ + G NC C+ Y + +
Sbjct: 347 CNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGYVRDTSLPMTHRKA 406
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C +C C+P+GSL CN S G+C CKPGVTG C+RC
Sbjct: 407 CKSCGCHPVGSLGKSCNQSSGQCVCKPGVTGTTCNRC 443
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 63/154 (40%), Gaps = 44/154 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG ++RC FDK G + DC+ + G CE C+ +Y + + N
Sbjct: 291 CKCNGHASRCIFDK-------MGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANS 343
Query: 54 CTACNCNPIGS--------------------LNLQCNSEGR--CQCKPGVTGDKCDRCDV 91
C ACNCN LN + N+ GR CKPG D +
Sbjct: 344 CVACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGYVRDTS--LPM 401
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
H CKSC C+P GS+ + C+ GQC
Sbjct: 402 TH----RKACKSCGCHPVGSLGKS--CNQSSGQC 429
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 66/181 (36%), Gaps = 60/181 (33%)
Query: 75 CQCKPGVTGDKCDRCDVNHYD--FGEA------GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C CK G +C+ C HYD +G A C +C CN
Sbjct: 310 CDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCN------------------- 350
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR--C 184
Q + R R EL F +GNR G LN + N+ GR
Sbjct: 351 --QHAKRCRFDAEL-------FRLSGNR--------------SGGVCLNCRHNTAGRNCH 387
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
CKPG D + H CKSC C+P GS+ + C+ GQC CK V G
Sbjct: 388 LCKPGYVRDTS--LPMTH----RKACKSCGCHPVGSLGKS--CNQSSGQCVCKPGVTGTT 439
Query: 245 C 245
C
Sbjct: 440 C 440
>gi|198431367|ref|XP_002126899.1| PREDICTED: similar to alpha 3,4,5-laminin [Ciona intestinalis]
Length = 3766
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C+ C G +C+ CR ++ G C C C GSL+ C++ GRC CK
Sbjct: 558 GQCI-CGDKYAGQSCDDCRSGFF---GFPVCQECQCTEPGSLDNTCDTRSGRCHCKSNYR 613
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G+ C+ C +Y G C SC+C+ GS + T CD GQC
Sbjct: 614 GESCEECAPEYY--GYPNCVSCDCDLRGSQRTT--CDQTNGQC----------------- 652
Query: 143 QSRKNF-----DPAGNRIWDLRRCK------RDTYPLGHGGSLNLQCNSEGRCQCKPGVT 191
R N D ++ RC+ R + G L + G+C+CKP V
Sbjct: 653 LCRPNVGGRACDHCTPDYFNFPRCEECSCDARGIESVVPGVCLAF---TTGQCECKPNVV 709
Query: 192 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G CD C HYD + GC SC C G++ NCDS GQC CK
Sbjct: 710 GKNCDMCKPLHYDI-DQGCVSCNCFLQGTLDGVGNCDSDDGQCFCK 754
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
G+LN C+ + G CQC P + G +CDRC YD+ E GCK C C +N C+ V
Sbjct: 2036 GALNSVCDVNTGECQCAPNIVGARCDRCAPGFYDYSEMGCKPCNC------RNNGPCNPV 2089
Query: 231 KGQCECKDNVEGAQC 245
GQCEC + G QC
Sbjct: 2090 NGQCECPPGITGVQC 2104
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 16/129 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G S+ C +D+++ R GG CL+C + G NCE+C Y++ S
Sbjct: 334 CNCHGHSSECQYDEDVARRRLSIDLAGNYEGGGVCLNCLHNTAGINCEQCASGYWRPSSV 393
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+C+ ++ + GRC CK GD+CDRC +YDF E C+ C+C
Sbjct: 394 DPRSIDGCRPCDCDSTYTVGSCEPNTGRCYCKVQYAGDRCDRCAPGYYDFPE--CRPCDC 451
Query: 107 NPAGSVKNT 115
G++ +
Sbjct: 452 YYNGTLNDV 460
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 102/235 (43%), Gaps = 47/235 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G +CE+C YY G C +C+C+ GS C+ + G+C C+P V G CD
Sbjct: 608 CKSNYRGESCEECAPEYY---GYPNCVSCDCDLRGSQRTTCDQTNGQCLCRPNVGGRACD 664
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNC--DSVKGQCESAQLSSRGRVHTELRVQSR 145
C ++++F C+ C C+ G P GQCE + + G
Sbjct: 665 HCTPDYFNFPR--CEECSCDARGIESVVPGVCLAFTTGQCE-CKPNVVG----------- 710
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNLQCN---SEGRCQCKPGVTGD 193
KN D CK Y + G G+L+ N +G+C CKP
Sbjct: 711 KNCD----------MCKPLHYDIDQGCVSCNCFLQGTLDGVGNCDSDDGQCFCKPYTCTQ 760
Query: 194 KCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C +C Y D GC SC+C+ G++ T +CD GQC C+ V G +C
Sbjct: 761 RCSQCVDGFYGLEDLNYLGCTSCQCDIGGAM--TASCDKNTGQCRCRTGVAGRRC 813
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
GHC CQ G C+ C +Y C C C G+LN C+ + G CQC P +
Sbjct: 1999 GHC-SCQPHVIGSLCDTCEPGFYNFDSCTGCQNCACAE-GALNSVCDVNTGECQCAPNIV 2056
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G +CDRC YD+ E GCK C C +N C+ V GQCE
Sbjct: 2057 GARCDRCAPGFYDYSEMGCKPCNC------RNNGPCNPVNGQCE 2094
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 91/215 (42%), Gaps = 27/215 (12%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 93
GP+C +C D Y+ C C C+ +G+ C+ G+C C G CD C
Sbjct: 522 GPSCTECADGYFNYP---LCQRCPCSDVGTTGNVCDPITGQCICGDKYAGQSCDDCRSGF 578
Query: 94 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
FG C+ C+C GS+ NT CD+ G+C + R +S + P
Sbjct: 579 --FGFPVCQECQCTEPGSLDNT--CDTRSGRC---------HCKSNYRGESCEECAPEYY 625
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 212
+ C D GS C+ + G+C C+P V G CD C ++++F C+
Sbjct: 626 GYPNCVSCDCDLR-----GSQRTTCDQTNGQCLCRPNVGGRACDHCTPDYFNFPR--CEE 678
Query: 213 CECNPAGSVKNTPNC--DSVKGQCECKDNVEGAQC 245
C C+ G P GQCECK NV G C
Sbjct: 679 CSCDARGIESVVPGVCLAFTTGQCECKPNVVGKNC 713
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C+P V G +C+RC ++ F C+ C+C A CD V G C +++
Sbjct: 1405 GQCPCRPNVIGRQCERCKTGYFSF--PNCQPCDCGGA-------MCDPVNGNC-ICPVNT 1454
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
E + + +FDP ++ C D G + C+ ++G+C CK V
Sbjct: 1455 IAPACDECQPLTH-SFDP-------IQGCLECDCNADGVENVTDRGCDVADGQCNCKETV 1506
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
TG +CD+C + FG C+ C+C+ G + + C+ + GQC CK NV G QC
Sbjct: 1507 TGQRCDQCKPGY--FGFPNCRKCQCDERG--RASDGCNPITGQCLCKPNVAGLQC 1557
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 42/203 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G C +C + G CE+C D Y+ GD CT C C+ G+ N+ + G C C+P
Sbjct: 1950 GECSECMFNTGGKYCERCADGYF---GDAIIARNCTECACDACGT-NVCDHMMGHCSCQP 2005
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G CD C+ Y+F GC++C C G++ + CD G+C+ A
Sbjct: 2006 HVIGSLCDTCEPGFYNFDSCTGCQNCAC-AEGALNSV--CDVNTGECQCAP--------- 2053
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG------SLNLQCNS-EGRCQCKPGVT 191
+ G R RC Y G N CN G+C+C PG+T
Sbjct: 2054 ----------NIVGARC---DRCAPGFYDYSEMGCKPCNCRNNGPCNPVNGQCECPPGIT 2100
Query: 192 GDKCDRCDVNHYDFGEAGCKSCE 214
G +CD+C++ + G + CE
Sbjct: 2101 GVQCDQCELARHIL-PPGARECE 2122
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL-----QCNSEGRCQ 76
G CL C+ + G C+ C +Y+ NF C C+C+ G ++ + G+C+
Sbjct: 650 GQCL-CRPNVGGRACDHCTPDYF-----NFPRCEECSCDARGIESVVPGVCLAFTTGQCE 703
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
CKP V G CD C HYD + GC SC C G++ NCDS GQC + R
Sbjct: 704 CKPNVVGKNCDMCKPLHYDI-DQGCVSCNCFLQGTLDGVGNCDSDDGQCFCKPYTCTQRC 762
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKC 195
Q F + DL + GG++ C+ + G+C+C+ GV G +C
Sbjct: 763 S-----QCVDGF----YGLEDLNYLGCTSCQCDIGGAMTASCDKNTGQCRCRTGVAGRRC 813
Query: 196 DRC 198
+R
Sbjct: 814 NRA 816
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 95/250 (38%), Gaps = 63/250 (25%)
Query: 28 DCQGDRDGPNCEKCRDNYY--QKSGD-NFCTACNCN-PIGSLNL-----QCNSEGRCQCK 78
DC + G NC+ C D Y SG+ + C C C P+ N Q + E C C+
Sbjct: 1842 DCLHNTGGDNCDVCIDGYIGNATSGEIDACQPCPCPFPMEDGNFADTCEQLDGELVCYCQ 1901
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT-PN-----CDSVKGQCESAQLSS 132
G TG +C+ C + FG C P N PN CD + G+C ++
Sbjct: 1902 VGYTGARCELCASGY--FGNPAVYGGSCQPCNCHGNLDPNLIMETCDPLTGECSECMFNT 1959
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN------------- 179
G+ RC G+ G + N
Sbjct: 1960 GGKY---------------------CERCAD-----GYFGDAIIARNCTECACDACGTNV 1993
Query: 180 ---SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCE 235
G C C+P V G CD C+ Y+F GC++C C G++ + CD G+C+
Sbjct: 1994 CDHMMGHCSCQPHVIGSLCDTCEPGFYNFDSCTGCQNCAC-AEGALNSV--CDVNTGECQ 2050
Query: 236 CKDNVEGAQC 245
C N+ GA+C
Sbjct: 2051 CAPNIVGARC 2060
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
GRC CK GD+CDRC +YDF E C+ C+C G++ + C + C CK N
Sbjct: 420 GRCYCKVQYAGDRCDRCAPGYYDFPE--CRPCDCYYNGTLNDV--CLPLGDACPCKYNFA 475
Query: 242 GAQC 245
G C
Sbjct: 476 GKYC 479
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ---CN-SEGRCQCKP 79
G+C+ C + P C++C+ + C C+CN G N+ C+ ++G+C CK
Sbjct: 1446 GNCI-CPVNTIAPACDECQPLTHSFDPIQGCLECDCNADGVENVTDRGCDVADGQCNCKE 1504
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C + FG C+ C+C+ G + + C+ + GQC
Sbjct: 1505 TVTGQRCDQCKPGY--FGFPNCRKCQCDERG--RASDGCNPITGQC 1546
>gi|47208533|emb|CAF91230.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2146
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 110/276 (39%), Gaps = 75/276 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ DGP CE+C+ ++ C C+C+P SL++ C G+C+C+P +G
Sbjct: 205 GRCL-CKPAFDGPRCEQCKSGFHSYPN---CQVCSCDPHTSLDVSCTPSGQCRCQPNYSG 260
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
CD+C +Y G C C C+ GS + +CD + GQC + G V
Sbjct: 261 ASCDQCAPGYY--GYPSCAPCGCSAEGS--HYSHCDRLSGQC----VCRPGVV------- 305
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
+ D + ++ C+ T SL+L C S+ +C+C+ V G CDRC ++
Sbjct: 306 -GRRCDACTHGLYGFPSCQGFTTSSSGINSLSLSC-SQDQCECRLHVEGPICDRCKPLYW 363
Query: 204 DFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECK----------------------- 237
+ GC CECN AG++ C GQC CK
Sbjct: 364 NLSPDSPDGCSDCECNTAGTLSRVAECAQDSGQCPCKPNACSGTCSTCKDGFYNLQQQNY 423
Query: 238 ----------------------------DNVEGAQC 245
NVEG +C
Sbjct: 424 FGCQGCQCDVGGSEGQACEERNGHCGCRPNVEGPKC 459
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 114/270 (42%), Gaps = 54/270 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNF-CTA 56
CNCNG S+ C G C DCQ + G +CEKC+ ++ +G C++
Sbjct: 1465 CNCNGHSDYCL---------DGSGICADCQHNTAGDHCEKCQGGFHGNISVAGQAVSCSS 1515
Query: 57 CNCNPIGSLN------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
C C N +Q + +C C PG TG KC+RC +Y G +C P
Sbjct: 1516 CPCPLTVPSNNFAEGCVQKSDTMQCLCMPGYTGPKCERCTPGYY--GNPMVLGSKCQPCN 1573
Query: 111 SVKNT-PN-----CDSVKGQCESAQLSSRGRVHTEL-------RVQSRKNFDPAGNRIWD 157
NT PN C + G+C + ++ G +H ++ S KN +
Sbjct: 1574 CHGNTDPNMLFTDCHPLTGECLNCMHNTAG-LHCDVCAPGFYGDAISVKNCTKCDCSLCG 1632
Query: 158 LRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECN 216
C T G+C CKPGV G +CDRC + F +GC+SC+CN
Sbjct: 1633 TESCDPHT----------------GQCHCKPGVLGRRCDRCLEGFFGFDSCSGCRSCDCN 1676
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ ++ CD GQC C+ V G CR
Sbjct: 1677 ASAALVQP--CDPQSGQCACQHGVNGPNCR 1704
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 104/256 (40%), Gaps = 46/256 (17%)
Query: 20 TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
TGHG C+ G C++C Y+ C C C+ +GSL C++ GRC CKP
Sbjct: 159 TGHG----ICRTGFHGYECDQCAPGYFNYP---LCQLCGCSSVGSLPEVCDTLGRCLCKP 211
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT------------------------ 115
G +C++C + + C+ C C+P S+ +
Sbjct: 212 AFDGPRCEQCKSGFHSY--PNCQVCSCDPHTSLDVSCTPSGQCRCQPNYSGASCDQCAPG 269
Query: 116 ----PNCDSVKGQCESAQLSSRGRVHTELR----VQSRKNFDPAGNRIWDLRRCKRDTYP 167
P+C E + S R+ + V R+ D + ++ C+ T
Sbjct: 270 YYGYPSCAPCGCSAEGSHYSHCDRLSGQCVCRPGVVGRR-CDACTHGLYGFPSCQGFTTS 328
Query: 168 LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNT 224
SL+L C S+ +C+C+ V G CDRC +++ GC CECN AG++
Sbjct: 329 SSGINSLSLSC-SQDQCECRLHVEGPICDRCKPLYWNLSPDSPDGCSDCECNTAGTLSRV 387
Query: 225 PNCDSVKGQCECKDNV 240
C GQC CK N
Sbjct: 388 AECAQDSGQCPCKPNA 403
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 26/198 (13%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G+ + C G +C C+P V G C C ++ F + CK C C
Sbjct: 1036 NNGALPCGCHEVGADSNTCQPFGGQCSCRPNVIGRDCTMCATGYWGFPD--CKPCNCG-- 1091
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
T C+ V G C + + T+ Q+ G + + +YP
Sbjct: 1092 -----TRLCEPVSGDCICPPRTLQPEC-TQCEPQTFGCHPVVGCEVCNC------SYP-- 1137
Query: 170 HGGSL-NLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G L ++ C+ G+C+CK + G +CDRC Y G C+ C CN AG+ + C
Sbjct: 1138 -GVVLPDVNCDRVSGQCRCKNNIVGRQCDRCAPGFY--GYPNCRPCNCNEAGTEEEV--C 1192
Query: 228 DSVKGQCECKDNVEGAQC 245
D V GQC CK+NV+G++C
Sbjct: 1193 DFVTGQCLCKENVQGSRC 1210
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 42/209 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTA 56
CNC+G ++ + + TG CL+C + G +C+ C +Y GD CT
Sbjct: 1572 CNCHGNTDPNMLFTDCHPLTGE---CLNCMHNTAGLHCDVCAPGFY---GDAISVKNCTK 1625
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT 115
C+C+ G+ + ++ G+C CKPGV G +CDRC + F +GC+SC+CN + ++
Sbjct: 1626 CDCSLCGTESCDPHT-GQCHCKPGVLGRRCDRCLEGFFGFDSCSGCRSCDCNASAALVQP 1684
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
CD GQC G + R+C + G G +
Sbjct: 1685 --CDPQSGQCACQH----------------------GVNGPNCRQCAPGFWDYGPSGCKS 1720
Query: 176 LQCNS------EGRCQCKPGVTGDKCDRC 198
C G C+C G+TG +CD C
Sbjct: 1721 CDCRGGHCDPRTGECRCADGMTGKQCDTC 1749
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 93/227 (40%), Gaps = 51/227 (22%)
Query: 57 CNCNPIGSLNLQCNSEGR---CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C C+ G+++ C + C CK G TGD CD C F C+ C+C+ G +
Sbjct: 96 CECSAAGTVDNSCRPHPQTRTCICKLGFTGDHCDTCAPG---FHGLNCQICQCSGPGCLD 152
Query: 114 NTPNCDSVKG--------------QCESAQL----------SSRGRVHTELRVQSRKNFD 149
+ CD++ G QC SS G + R
Sbjct: 153 GS--CDTLTGHGICRTGFHGYECDQCAPGYFNYPLCQLCGCSSVGSLPEVCDTLGRCLCK 210
Query: 150 PAGNRIWDLRRCKR-----DTYP------LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
PA +D RC++ +YP SL++ C G+C+C+P +G CD+C
Sbjct: 211 PA----FDGPRCEQCKSGFHSYPNCQVCSCDPHTSLDVSCTPSGQCRCQPNYSGASCDQC 266
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+Y G C C C+ GS + +CD + GQC C+ V G +C
Sbjct: 267 APGYY--GYPSCAPCGCSAEGS--HYSHCDRLSGQCVCRPGVVGRRC 309
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS----EGRCQ-CKPGV 81
C GP CE+C YY + C CNC+ N+ G C C
Sbjct: 1542 CMPGYTGPKCERCTPGYYGNPMVLGSKCQPCNCHGNTDPNMLFTDCHPLTGECLNCMHNT 1601
Query: 82 TGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G CD C Y C C+C+ G T +CD GQC + GR +
Sbjct: 1602 AGLHCDVCAPGFYGDAISVKNCTKCDCSLCG----TESCDPHTGQCH-CKPGVLGR-RCD 1655
Query: 140 LRVQSRKNFDP-AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
++ FD +G R D +L C+ + G+C C+ GV G C +
Sbjct: 1656 RCLEGFFGFDSCSGCRSCDCNA----------SAALVQPCDPQSGQCACQHGVNGPNCRQ 1705
Query: 198 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +D+G +GCKSC+C +CD G+C C D + G QC
Sbjct: 1706 CAPGFWDYGPSGCKSCDCRGG-------HCDPRTGECRCADGMTGKQC 1746
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 65/150 (43%), Gaps = 22/150 (14%)
Query: 62 IGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNC 118
I SL+L C S+ +C+C+ V G CDRC +++ GC CECN AG++ C
Sbjct: 332 INSLSLSC-SQDQCECRLHVEGPICDRCKPLYWNLSPDSPDGCSDCECNTAGTLSRVAEC 390
Query: 119 DSVKGQCESAQLSSRGRVHT----ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
GQC + G T +Q + F G C+ D GGS
Sbjct: 391 AQDSGQCPCKPNACSGTCSTCKDGFYNLQQQNYFGCQG--------CQCDV-----GGSE 437
Query: 175 NLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C G C C+P V G KC++ +HY
Sbjct: 438 GQACEERNGHCGCRPNVEGPKCNKPRKDHY 467
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 102/269 (37%), Gaps = 65/269 (24%)
Query: 35 GPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC 89
G NCE+C YY+ C+ C C+ + + G C CK +G+ CD+C
Sbjct: 2 GVNCERCVPTYYRSPDYTIDSQLACSRCECDSQFTDGTCEDFTGLCFCKVNFSGENCDQC 61
Query: 90 DVNHYDF----------------GEAG----CKSCECNPAGSVKNT-------------- 115
+F GEA +CEC+ AG+V N+
Sbjct: 62 ASGFINFPHCYPMATYPTDNNNNGEAKPAGEIINCECSAAGTVDNSCRPHPQTRTCICKL 121
Query: 116 ----PNCDSVKG-----QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK--RD 164
+CD+ C+ Q S G + + G ++ +C
Sbjct: 122 GFTGDHCDTCAPGFHGLNCQICQCSGPGCLDGSCDTLTGHGICRTGFHGYECDQCAPGYF 181
Query: 165 TYPL------GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
YPL GSL C++ GRC CKP G +C++C + + C+ C C+P
Sbjct: 182 NYPLCQLCGCSSVGSLPEVCDTLGRCLCKPAFDGPRCEQCKSGFHSY--PNCQVCSCDPH 239
Query: 219 GS--VKNTPNCDSVKGQCECKDNVEGAQC 245
S V TP+ GQC C+ N GA C
Sbjct: 240 TSLDVSCTPS-----GQCRCQPNYSGASC 263
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C++C +Y G C CNCN G+ C+ G+C CK V G +CD
Sbjct: 1155 CKNNIVGRQCDRCAPGFY---GYPNCRPCNCNEAGTEEEVCDFVTGQCLCKENVQGSRCD 1211
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
+C V + GC SC C
Sbjct: 1212 QCKVGTFHLDPTNPKGCTSCFC 1233
>gi|348578077|ref|XP_003474810.1| PREDICTED: laminin subunit beta-3-like [Cavia porcellus]
Length = 1174
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 57/276 (20%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ HGG C +C+ +G NCE+C+ +Y++ +
Sbjct: 317 CDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPLEET 376
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ G+C CK V G++CD C GC C+C+
Sbjct: 377 CIPCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTHTNPQGCHRCDCSI 436
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G+ ++ P CD G+C + G R +C + + L
Sbjct: 437 LGARRDMP-CDEETGRCLCLP-------------------NVVGPRC---DQCAPNHWKL 473
Query: 169 GHG-----------GSLNLQCNS-EGRCQCKPGVTGDKCDRC-------DVNHYDFGEAG 209
G SL+ QCN G+C C+ G G C+ D H D G
Sbjct: 474 ASGQGCQPCACDPRTSLSSQCNQFTGQCPCQEGFDGLTCNAAAAIRQCPDQTHGDIA-TG 532
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+SC+C+ G+ P CD V G+C C+ G +C
Sbjct: 533 CRSCDCDFRGT--ENPGCDKVSGRCLCRPGFTGRRC 566
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 107/254 (42%), Gaps = 60/254 (23%)
Query: 29 CQGDRDGPNCEKCRDNY----YQKSGD---NFCTACNCN---------PIGSLNLQCNSE 72
CQ + GP+CE+C Y ++ + D + C C+CN P Q
Sbjct: 282 CQHNTAGPHCERCAPFYNNQPWRPAEDQDPHECQRCDCNGHSETCHFDPAVFAASQGAHG 341
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C C+ G C+RC ++++ G C CEC+P G+V P CD V GQC
Sbjct: 342 GVCDNCRDHTEGKNCERCQLHYFRNRRPGAPLEETCIPCECDPDGAVPGAP-CDPVTGQC 400
Query: 126 ---ESAQ--------LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGS 173
E Q G HT +P G C R D LG
Sbjct: 401 VCKEHVQGERCDLCKPGFTGLTHT----------NPQG--------CHRCDCSILG--AR 440
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVK 231
++ C+ E GRC C P V G +CD+C NH+ GC+ C C+P S+ + C+
Sbjct: 441 RDMPCDEETGRCLCLPNVVGPRCDQCAPNHWKLASGQGCQPCACDPRTSLSS--QCNQFT 498
Query: 232 GQCECKDNVEGAQC 245
GQC C++ +G C
Sbjct: 499 GQCPCQEGFDGLTC 512
>gi|327266061|ref|XP_003217825.1| PREDICTED: netrin-4-like [Anolis carolinensis]
Length = 748
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 22/139 (15%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
C C+ ++ C FD+ ++ +R GG C +C+ + +G C++C+ +Y+ G
Sbjct: 445 CRCHNHADSCHFDRSVWLASRKKSGGICDNCKHNTEGNRCQRCKPGFYRDRGKPISSPQI 504
Query: 54 CTACNCNPIGSLNLQCNSE-------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+G+++ N G C CK GV G KCDRC + ++ FGE GC+ C+C
Sbjct: 505 CKPCSCHPMGTVSATFNQSWKCHPKTGFCYCKAGVAGPKCDRCLLGYWGFGEHGCRPCDC 564
Query: 107 NPAGSVKNTPNCDSVKGQC 125
+CD G+C
Sbjct: 565 --------ARDCDKQTGEC 575
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
G C CK GV G KCDRC + ++ FGE GC+ C+C +CD G+C
Sbjct: 531 GFCYCKAGVAGPKCDRCLLGYWGFGEHGCRPCDC--------ARDCDKQTGEC 575
>gi|395856423|ref|XP_003800628.1| PREDICTED: laminin subunit beta-2 [Otolemur garnettii]
Length = 1793
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 108/267 (40%), Gaps = 83/267 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+G ++ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 342 CECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGHHCELCRPFFYRDPTKDLRDPAV 401
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P+GS + +C+S G+C+CK V G++C +C + + G
Sbjct: 402 CRPCDCDPMGSQDGGRCDSHDDPALGLVSGQCRCKEYVVGNRCQQCRDGFFGLSASDPLG 461
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CN G+V C DP G
Sbjct: 462 CRRCQCNTRGTVPGHTPC------------------------------DPKG-------- 483
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPA 218
G C CK VTG C+ C H+ GC+ C+C+
Sbjct: 484 ---------------------GTCFCKRLVTGHGCNHCLPGHWGLSHDLLGCRPCDCDVG 522
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ P CD GQC C+ ++ G +C
Sbjct: 523 GALD--PQCDEATGQCHCRQHMVGRRC 547
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C CNP GSL+ +CN G +C CKPGV G CD C +Y FG GC++C+C+P G
Sbjct: 773 NGALPCQCNPQGSLSSECNPHGGQCLCKPGVIGRHCDLCVPGYYGFGPTGCQACQCSPEG 832
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 833 ALSGL--CEGTSGQC 845
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C +GP+C C+ ++ ++ C C CN +G+ QC S
Sbjct: 998 HTGQCLRCLHHTEGPHCAHCKPGFHGQAAQQSCHRCTCNRLGTNPQQCPSADSCHCDPSS 1057
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQL 130
G+C C P V G CD C N ++ GC+ C C+ S P C GQC A
Sbjct: 1058 GQCPCLPNVQGPSCDHCAPNFWNLTSGHGCQPCACH--QSRARGPTCSEFTGQCHCHAGF 1115
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPG 189
R T Q DP R C D + G QC+ S G C C+PG
Sbjct: 1116 GGR----TCAECQELHWGDPG----LQCRVCDCDPH-----GIDTPQCHRSTGHCSCRPG 1162
Query: 190 VTGDKCDRC 198
V+G +CD+C
Sbjct: 1163 VSGVRCDQC 1171
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 168 LGHGGSLNLQCNSE-----------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
L + G+L QCN + G+C CKPGV G CD C +Y FG GC++C+C+
Sbjct: 770 LIYNGALPCQCNPQGSLSSECNPHGGQCLCKPGVIGRHCDLCVPGYYGFGPTGCQACQCS 829
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P G++ C+ GQC C+ G +C
Sbjct: 830 PEGALSGL--CEGTSGQCPCRTGAFGLRC 856
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 105/238 (44%), Gaps = 30/238 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG CL C+ G +C+ C YY G C AC C+P G+L+ C + G+C C+ G
Sbjct: 793 HGGQCL-CKPGVIGRHCDLCVPGYY-GFGPTGCQACQCSPEGALSGLCEGTSGQCPCRTG 850
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CDRC + F C+ C CN + CD+ G C + + G H E
Sbjct: 851 AFGLRCDRCQRGQWGF--PSCRPCVCN-----GHADECDTHTGACLGCRDHTGGE-HCE- 901
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL-------QCNSEGRCQCKPGVTGD 193
R + DP R+ +C+ P G G + + + + C C+ G TG
Sbjct: 902 RCIAGFYGDP---RLPYGGQCRPCPCPEGPGSQRHFATSCHRDEYSQQIVCHCQTGHTGL 958
Query: 194 KCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+C+ C H FG+ C+ CEC+ + + CD GQC C + EG C
Sbjct: 959 RCEACAPGH--FGQPSRPGGQCQPCECSGNIDLMDPDACDPHTGQCLRCLHHTEGPHC 1014
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 104/276 (37%), Gaps = 58/276 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C H G CL C+ G +CE+C +Y
Sbjct: 872 CVCNGHADEC---------DTHTGACLGCRDHTGGEHCERCIAGFYGDPRLPYGGQCRPC 922
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG- 100
S +F T+C+ + + + + C C+ G TG +C+ C H FG+
Sbjct: 923 PCPEGPGSQRHFATSCHRD-------EYSQQIVCHCQTGHTGLRCEACAPGH--FGQPSR 973
Query: 101 ----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR--VQSRKNFDPAGNR 154
C+ CEC+ + + CD GQC R HTE + F +
Sbjct: 974 PGGQCQPCECSGNIDLMDPDACDPHTGQC------LRCLHHTEGPHCAHCKPGFHGQAAQ 1027
Query: 155 IWDLRRC---KRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-G 209
RC + T P + + C+ S G+C C P V G CD C N ++ G
Sbjct: 1028 -QSCHRCTCNRLGTNPQQCPSADSCHCDPSSGQCPCLPNVQGPSCDHCAPNFWNLTSGHG 1086
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C C+ S P C GQC C G C
Sbjct: 1087 CQPCACH--QSRARGPTCSEFTGQCHCHAGFGGRTC 1120
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C G G C C H+ C+ C+C+P G +TP C G C C+ V
Sbjct: 1107 GQCHCHAGFGGRTCAECQELHWGDPGLQCRVCDCDPHG--IDTPQCHRSTGHCSCRPGVS 1164
Query: 242 GAQC 245
G +C
Sbjct: 1165 GVRC 1168
>gi|431906648|gb|ELK10769.1| Netrin-3 [Pteropus alecto]
Length = 580
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 8/99 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDV 91
C AC+C+P+G+ CN + G+C CK GVTG C+RC +
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAL 409
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATAREAH 306
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 366
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C++C+C+P G+ T C+ GQC
Sbjct: 367 DRRACRACDCHPVGAAGKT--CNQTTGQCP 394
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C Y D G A C++C+C+P G+ T C+ GQC CKD
Sbjct: 341 CRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKT--CNQTTGQCPCKDG 398
Query: 240 VEGAQC 245
V G C
Sbjct: 399 VTGLTC 404
>gi|62005680|dbj|BAD91310.1| axon guidance molecule HpNetrin [Hemicentrotus pulcherrimus]
Length = 623
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 8/101 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
CNCN + +C F+ ELY +G GG CL C+ + DG C C++ YY+
Sbjct: 354 CNCNLHARKCRFNMELYKLSGRKSGGVCLKCRHNTDGRYCHYCKEGYYRDQSKPITHRKV 413
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNH 93
C AC+C+PIGSL CN + G+C CK GVTG C+RC + +
Sbjct: 414 CKACDCHPIGSLGSICNQTTGQCPCKDGVTGLTCNRCSLGY 454
>gi|327266246|ref|XP_003217917.1| PREDICTED: laminin subunit beta-1-like [Anolis carolinensis]
Length = 1827
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 20/145 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN S+RC FD +Y TG+ GG C +C + G +C+ C+ YY+ +
Sbjct: 322 CNCNEHSHRCHFDMAVYLATGNTSGGVCDECLHNTMGRHCQLCKPFYYRNPMADIRASTA 381
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C+C+P+GSL+ C+S G+C+CK V G +CD C Y + G
Sbjct: 382 CIPCDCDPVGSLDGGVCDSHTDVSLGMIAGQCRCKDNVKGVRCDSCKEAFYGLSQNDPLG 441
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQC 125
C+ C C+P G + CD + G C
Sbjct: 442 CQPCRCDPRGIIAGNSPCDHISGDC 466
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 115/272 (42%), Gaps = 51/272 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------C 54
C+CNG S C H G C DC+ G +CE+C D YY GD C
Sbjct: 905 CHCNGHSEECDL---------HTGACHDCRDYTAGRHCERCLDGYY---GDPILGSGQQC 952
Query: 55 TACNCNPI-GSLN---LQCNS-----EGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCK 102
C C GS + + C++ + C C PG TG +CDRC ++ E C+
Sbjct: 953 RPCPCPGYPGSRHYHGISCDTDRETNQISCLCAPGYTGLRCDRCSPGYFGAPEQEGGACR 1012
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
C+CN + CD GQC + G E + P R C+
Sbjct: 1013 PCQCNNNIDTSDPEACDPHTGQCLRCLYYTSGPHCAECQ--------PGYYGSAFQRSCR 1064
Query: 163 RDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSC 213
R T G+L + C+ + G C C+ V CDRC N + FG + GC+ C
Sbjct: 1065 RCT--CNEQGTLPMHCSKGICHCDRTTGNCPCRANVVDKNCDRCAQNFWGFGSDLGCQPC 1122
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+PA S+++ +C+ GQC C+ G C
Sbjct: 1123 DCDPAHSLRS--DCNMFTGQCHCQPGFGGRVC 1152
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 24/187 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN--------SEG 73
H G CL C GP+C +C+ YY + C C CN G+L + C+ + G
Sbjct: 1031 HTGQCLRCLYYTSGPHCAECQPGYYGSAFQRSCRRCTCNEQGTLPMHCSKGICHCDRTTG 1090
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C+ V CDRC N + FG + GC+ C+C+PA S+++ +C+ GQC Q
Sbjct: 1091 NCPCRANVVDKNCDRCAQNFWGFGSDLGCQPCDCDPAHSLRS--DCNMFTGQCH-CQPGF 1147
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
GRV ++ + D G+ + C+ D GS + QC+ G C C+ G T
Sbjct: 1148 GGRVCSQCQE------DHWGDPEQECLPCECDP-----AGSESPQCDRLSGHCLCREGFT 1196
Query: 192 GDKCDRC 198
G +C +C
Sbjct: 1197 GRRCHQC 1203
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
SL CN G+C C+PG G C +C +H+ E C CEC+PAGS +P CD +
Sbjct: 1129 SLRSDCNMFTGQCHCQPGFGGRVCSQCQEDHWGDPEQECLPCECDPAGS--ESPQCDRLS 1186
Query: 232 GQCECKDNVEGAQC 245
G C C++ G +C
Sbjct: 1187 GHCLCREGFTGRRC 1200
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P GS + C+ G +CQCKP V G +CD C Y FG GC C C+ GS
Sbjct: 811 CQCDPQGSTSSVCHKLGGQCQCKPNVIGRRCDECVPGTYGFGPYGCIPCACSHEGSASKI 870
Query: 116 PNCDSVKGQC 125
C+ GQC
Sbjct: 871 --CEPTSGQC 878
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G +CD C Y + GC+ C C+P G + CD + G C CK
Sbjct: 411 GQCRCKDNVKGVRCDSCKEAFYGLSQNDPLGCQPCRCDPRGIIAGNSPCDHISGDCYCKR 470
Query: 239 NVEGAQC 245
V G C
Sbjct: 471 FVTGRYC 477
>gi|115686177|ref|XP_781902.2| PREDICTED: netrin-1-like [Strongylocentrotus purpuratus]
Length = 623
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 8/101 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
CNCN + +C F+ ELY +G GG CL C+ + DG C C++ YY+
Sbjct: 354 CNCNLHARKCRFNMELYKLSGRKSGGVCLKCRHNTDGRYCHYCKEGYYRDQSKPITHRKV 413
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNH 93
C AC+C+PIGSL CN + G+C CK GVTG C+RC + +
Sbjct: 414 CKACDCHPIGSLGSICNQTTGQCPCKDGVTGLTCNRCSLGY 454
>gi|351696323|gb|EHA99241.1| Netrin-3 [Heterocephalus glaber]
Length = 490
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 12/159 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +GH GG CL+C+ + G +C C++ +Y+ +
Sbjct: 311 CSCNGHARRCRFNMELYRLSGHRSGGVCLNCRHNTAGRHCHYCQEGFYRDPDRSLSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC + F ++ C
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCALG---FQQSRSPVAPCVKTPIP 427
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNFDP 150
T + V+ Q C+S + G L+ RK++ P
Sbjct: 428 GPTEDSSPVEPQDCKSHCRPAHGSYRISLKKFCRKDYGP 466
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 34/150 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDAQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARETH 306
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHYDFGE---- 98
C AC+CN N++ S G C C+ G C C Y +
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGHRSGGVCLNCRHNTAGRHCHYCQEGFYRDPDRSLS 366
Query: 99 --AGCKSCECNPAGSVKNTPNCDSVKGQCE 126
C++C+C+P G+ T C+ GQC
Sbjct: 367 DRRACRACDCHPVGAAGKT--CNQTTGQCP 394
>gi|340709970|ref|XP_003393572.1| PREDICTED: laminin subunit beta-1-like isoform 2 [Bombus
terrestris]
Length = 1803
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CN +N C FD+ +Y +G GG C DCQ + G NCE C+ +Y +
Sbjct: 368 CICNNHTNSCHFDEAVYENSGRVSGGVCDDCQHNTMGKNCELCKPFFYHDVTKDITHPEA 427
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C C+C+ GSL+ L GRC CK V G +CDRC ++F G
Sbjct: 428 CLPCDCDLGGSLDDGICDSITNPLTGGESGRCNCKANVEGRRCDRCKNGFWNFDPENPEG 487
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C++C CN G++ N C+ V G+C + + + L + DP G
Sbjct: 488 CQACTCNILGTIDNR-GCNMVTGECTCKRYVTARDCNQCLPEYWGLSEDPDG-------- 538
Query: 161 CKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
CK D P GGS C+ G+C+C+P V+G C++ + ++Y
Sbjct: 539 CKPCDCDP---GGSYENSCDVVTGQCRCRPHVSGRTCNQPEQSYY 580
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCKPG 80
G CL C + DG NC+ C+ +Y + + C C C+ +G+ + G+C C P
Sbjct: 1024 GRCLQCLYNTDGANCQICKAGFYGNALEQDCEDCMCDVLGTDRNAGPCDHRTGQCSCLPH 1083
Query: 81 VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G CD C+ NH+ GC CEC+ GSV + C+ G CE R +
Sbjct: 1084 VIGLLCDSCEENHWRIASGQGCDPCECDAVGSVSD--RCNPYDGTCECRPGFGGRRCN-- 1139
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
+ + N+ GN + C D GS + QC+ E G C C G+ G+KCD+C
Sbjct: 1140 ---ECQTNY--WGNPNVECYPCDCDL-----TGSASQQCDRETGMCVCHKGIGGEKCDQC 1189
Query: 199 DVNHYDFGEAGCKSCECNPAG 219
D +Y G A +CNP G
Sbjct: 1190 DRGYY--GNAP----QCNPCG 1204
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 35 GPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN---SEGRC-QCKPGVTGDKCDR 88
GP CE C +NY+ + C +CNCN L N GRC QC G C
Sbjct: 981 GPRCESCAENYFGNPEVPGGSCESCNCNNNTDLRRPGNCDPETGRCLQCLYNTDGANCQI 1040
Query: 89 CDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV-----HTELRV 142
C Y + E C+ C C+ G+ +N CD GQC S G + R+
Sbjct: 1041 CKAGFYGNALEQDCEDCMCDVLGTDRNAGPCDHRTGQC-SCLPHVIGLLCDSCEENHWRI 1099
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
S + DP C+ D GS++ +CN +G C+C+PG G +C+ C N
Sbjct: 1100 ASGQGCDP----------CECDAV-----GSVSDRCNPYDGTCECRPGFGGRRCNECQTN 1144
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ C C+C+ GS + CD G C C + G +C
Sbjct: 1145 YWGNPNVECYPCDCDLTGSA--SQQCDRETGMCVCHKGIGGEKC 1186
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 94/218 (43%), Gaps = 39/218 (17%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
YY G + +C CNP GS +L C N G C CK V G +CDRC Y F GC
Sbjct: 793 YYVYDGAH---SCECNPTGSHSLLCENYGGTCPCKQNVVGRRCDRCAPGTYGFSPEGCIP 849
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV--QSRKNFDPAGNRIWDLRRC 161
C+C+ G++ N CD G+C + R +T R Q F W+ C
Sbjct: 850 CDCDGVGALDNF--CDIETGRC-------KCRPNTYGRTCGQCEPGF-------WNFPHC 893
Query: 162 KRDTYPLGHGGSLNLQCNSE-GRC-QCKPGVTGDKCDRCDVNHYDFGEAG----CKSCEC 215
+R GH S C+S+ G C C+ TG CDRC +Y G C++C C
Sbjct: 894 QRCECN-GHAES----CDSKTGACINCRDYTTGHNCDRCIETYYGDPRIGVDIPCRACPC 948
Query: 216 ----NPAGSVKNTPNCDSVKGQ--CECKDNVEGAQCRS 247
+ S + + D V CEC D G +C S
Sbjct: 949 PGTIDSGHSYAESCSLDPVTHDVICECFDGYTGPRCES 986
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNP 217
C T PL G S GRC CK V G +CDRC ++F GC++C CN
Sbjct: 444 CDSITNPLTGGES--------GRCNCKANVEGRRCDRCKNGFWNFDPENPEGCQACTCNI 495
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ N C+ V G+C CK V C
Sbjct: 496 LGTIDNR-GCNMVTGECTCKRYVTARDC 522
>gi|4732097|gb|AAD28602.1|AF128865_1 netrin-1 precursor [Mus musculus]
Length = 604
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 460 TTAASSAEEPEDCDSYCKASKGKLKMNMKKYCRKDY 495
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
>gi|341895521|gb|EGT51456.1| CBN-LAM-1 protein [Caenorhabditis brenneri]
Length = 1049
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 105/224 (46%), Gaps = 32/224 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ---KSGDN--F 53
CNCN + RC FD+ +Y +G GG C DC + G NCE+C+ +Y+ ++ D+
Sbjct: 347 CNCNRHALRCHFDRAVYEASGFVSGGVCDDCMHNTQGKNCEQCKPFFYRDPRRTIDDPHV 406
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+ GS N C E G+C CK V G++CDRC +++ E+ G
Sbjct: 407 CLPCECDKAGSQNKGICEGEEDAERGLVAGKCYCKTNVDGNRCDRCKNGYWNLTESNIDG 466
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C +C CN G+ N CD G C +L V E Q + +
Sbjct: 467 CVACTCNLLGTYNNE-GCDKYTGMCTCKRL-----VTGENCDQCLPEHYGLSEHVDGCKA 520
Query: 161 CKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C D GGS + C+ S G+C+C+ G +G +C+ D + Y
Sbjct: 521 CDCDI-----GGSYDNSCDVSTGQCKCREGFSGRRCETADSSFY 559
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N + CNC+ GS++ C+ G +C+CKP V G +CD+C + Y FG GCK C+C+ G
Sbjct: 777 NKTSECNCDATGSVSGICSVLGGQCECKPNVVGRRCDQCAIGTYGFGPTGCKKCDCDAVG 836
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGR 135
S+ N +CD GQC + GR
Sbjct: 837 SLGN--DCDKQSGQCVCREKGIYGR 859
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 30/239 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP-G 80
GG C +C+ + G C++C Y G C C+C+ +GSL C+ + G+C C+ G
Sbjct: 798 GGQC-ECKPNVVGRRCDQCAIGTY-GFGPTGCKKCDCDAVGSLGNDCDKQSGQCVCREKG 855
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+ G +C++C + F E C++C+CN ++ CD G C + + G H
Sbjct: 856 IYGRQCNQCQPGFWGFPE--CRTCQCNDHANI-----CDQATGACIECRDLTTG--HYCD 906
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLG------HGGSLNLQCN----SEGRCQCKPGV 190
R Q DP R+ CK P G H + L+ + + C CK G
Sbjct: 907 RCQDGYYGDP---RLGVGIPCKPCPCPGGPTSGYQHADTCYLRNSGNNTQDIVCNCKSGY 963
Query: 191 TGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
G++C C NH+ E G C+ C+CN + +CD+ G+C +C + EG QC
Sbjct: 964 QGERCGECAQNHWGSPREVGGTCERCDCNGNIDMSMEGSCDAATGECLKCLHHTEGPQC 1022
>gi|149052990|gb|EDM04807.1| netrin 1, isoform CRA_a [Rattus norvegicus]
Length = 446
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ G
Sbjct: 183 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKA 242
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 243 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 301
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 302 TTAASSMEEPEDCDSYCKASKGKLKMNMKKYCRKDY 337
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 127 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 179
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C Y D G+
Sbjct: 180 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITH 239
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 240 RKACKACDCHPVGAAGKT--CNQTTGQC 265
>gi|268579963|ref|XP_002644964.1| C. briggsae CBR-UNC-6 protein [Caenorhabditis briggsae]
Length = 608
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKC-----RDNYYQKSGDNF 53
CNCN + RC FD EL+ +G+ GG CL+C+ + G NC C RD +
Sbjct: 343 CNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKA 402
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C +C C+P+GSL CN S G+C CKPGVTG C+RC
Sbjct: 403 CKSCGCHPVGSLGKSCNQSSGQCVCKPGVTGTTCNRC 439
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 63/154 (40%), Gaps = 44/154 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG ++RC FDK G + DC+ + G CE C+ +Y + + N
Sbjct: 287 CKCNGHASRCIFDK-------MGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANS 339
Query: 54 CTACNCNPIGS--------------------LNLQCNSEGR--CQCKPGVTGDKCDRCDV 91
C ACNCN LN + N+ GR CKPG D +
Sbjct: 340 CVACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTS--LPM 397
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
H CKSC C+P GS+ + C+ GQC
Sbjct: 398 TH----RKACKSCGCHPVGSLGKS--CNQSSGQC 425
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 66/181 (36%), Gaps = 60/181 (33%)
Query: 75 CQCKPGVTGDKCDRCDVNHYD--FGEA------GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C CK G +C+ C HYD +G A C +C CN
Sbjct: 306 CDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCN------------------- 346
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR--C 184
Q + R R EL F +GNR G LN + N+ GR
Sbjct: 347 --QHAKRCRFDAEL-------FRLSGNR--------------SGGVCLNCRHNTAGRNCH 383
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
CKPG D + H CKSC C+P GS+ + C+ GQC CK V G
Sbjct: 384 LCKPGFVRDTS--LPMTH----RKACKSCGCHPVGSLGKS--CNQSSGQCVCKPGVTGTT 435
Query: 245 C 245
C
Sbjct: 436 C 436
>gi|395516696|ref|XP_003762523.1| PREDICTED: netrin-4-like [Sarcophilus harrisii]
Length = 638
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 22/143 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C C+ ++ C FD++++ +G GG C +C+ +G +C+KC+ +Y+ S
Sbjct: 333 CRCHNHADSCHFDEDVWLSSGKRRGGICDNCRHHTEGRHCQKCKSGFYRDWSKPMSSPEV 392
Query: 54 CTACNCNPIGSLN------LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C P+GS N C+ + G C CKPGV G CDRC V ++ FG GC+ C C
Sbjct: 393 CKPCSCQPLGSSNETSHKGFPCHPKTGYCLCKPGVAGPHCDRCLVGYWGFGGNGCRPCNC 452
Query: 107 NPAGSVKNTPNCDSVKGQCESAQ 129
+ A CD G C S
Sbjct: 453 SGA--------CDPHTGACLSGH 467
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G C CKPGV G CDRC V ++ FG GC+ C C+ A
Sbjct: 419 GYCLCKPGVAGPHCDRCLVGYWGFGGNGCRPCNCSGA 455
>gi|17570167|ref|NP_509165.1| Protein UNC-6 [Caenorhabditis elegans]
gi|465001|sp|P34710.1|UNC6_CAEEL RecName: Full=Netrin unc-6; AltName: Full=Uncoordinated protein 6;
Flags: Precursor
gi|289724|gb|AAA28157.1| unc-6 [Caenorhabditis elegans]
gi|351060259|emb|CCD67895.1| Protein UNC-6 [Caenorhabditis elegans]
Length = 612
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKC-----RDNYYQKSGDNF 53
CNCN + RC FD EL+ +G+ GG CL+C+ + G NC C RD +
Sbjct: 347 CNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKA 406
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C +C C+P+GSL CN S G+C CKPGVTG C+RC
Sbjct: 407 CKSCGCHPVGSLGKSCNQSSGQCVCKPGVTGTTCNRC 443
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 63/154 (40%), Gaps = 44/154 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG ++RC FDK G + DC+ + G CE C+ +Y + + N
Sbjct: 291 CKCNGHASRCIFDK-------MGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANS 343
Query: 54 CTACNCNPIGS--------------------LNLQCNSEGR--CQCKPGVTGDKCDRCDV 91
C ACNCN LN + N+ GR CKPG D +
Sbjct: 344 CVACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTS--LPM 401
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
H CKSC C+P GS+ + C+ GQC
Sbjct: 402 TH----RKACKSCGCHPVGSLGKS--CNQSSGQC 429
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 66/181 (36%), Gaps = 60/181 (33%)
Query: 75 CQCKPGVTGDKCDRCDVNHYD--FGEA------GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C CK G +C+ C HYD +G A C +C CN
Sbjct: 310 CDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCN------------------- 350
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR--C 184
Q + R R EL F +GNR G LN + N+ GR
Sbjct: 351 --QHAKRCRFDAEL-------FRLSGNR--------------SGGVCLNCRHNTAGRNCH 387
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
CKPG D + H CKSC C+P GS+ + C+ GQC CK V G
Sbjct: 388 LCKPGFVRDTS--LPMTH----RKACKSCGCHPVGSLGKS--CNQSSGQCVCKPGVTGTT 439
Query: 245 C 245
C
Sbjct: 440 C 440
>gi|338711702|ref|XP_003362564.1| PREDICTED: LOW QUALITY PROTEIN: netrin-1-like [Equus caballus]
Length = 530
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 267 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 326
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 327 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGVTCNRC-AKGYQQSRSPIAPCIKIPVAPP 385
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C+S +S+G++ ++ +K++
Sbjct: 386 TTAATSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 421
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 211 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 263
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 264 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITH 323
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 324 RKACKACDCHPVGAAGKT--CNQTTGQC 349
>gi|402898752|ref|XP_003912381.1| PREDICTED: netrin-1 [Papio anubis]
Length = 808
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 545 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPISHRKA 604
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 605 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 663
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 664 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 699
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 489 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 541
Query: 54 CTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 542 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPISH 601
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 602 RKACKACDCHPVGAAGKT--CNQTTGQC 627
>gi|4098197|gb|AAD09221.1| netrin-1 [Homo sapiens]
Length = 604
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 495
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D+ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRT-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
>gi|291405054|ref|XP_002719022.1| PREDICTED: netrin 1, partial [Oryctolagus cuniculus]
Length = 474
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 296 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 355
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 356 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 414
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 415 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 450
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ GG DC+ + GP C++C+ +Y + N
Sbjct: 240 CKCNGHAARCVRDRD-------GGLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 292
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 293 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITH 352
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 353 RKACRACDCHPVGAAGKT--CNQTTGQC 378
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C +Y D G+ C++C+C+P G+ T C+ GQC CKD
Sbjct: 326 CRHNTAGRHCHYCKEGYYRDMGKPITHRKACRACDCHPVGAAGKT--CNQTTGQCPCKDG 383
Query: 240 VEGAQC 245
V G C
Sbjct: 384 VTGITC 389
>gi|195427709|ref|XP_002061919.1| GK17256 [Drosophila willistoni]
gi|194158004|gb|EDW72905.1| GK17256 [Drosophila willistoni]
Length = 3709
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 97/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ G+ + CN++G+C C+P G +CD
Sbjct: 606 NCLTNFAGRQCTLCSAGYYSYPD---CLPCHCDLHGAEGVTCNADGQCLCQPNFDGRQCD 662
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C Y+F C+ C C+PAG + C SV G+ + GR+ E + Q
Sbjct: 663 SCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICDECKPQ--- 717
Query: 147 NFDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G +L+ + G+C CKP G +C C
Sbjct: 718 --------YWNLNISNPDGCQNCDCWTDGTISALDTCASKSGQCPCKPHTQGRRCKECKD 769
Query: 201 NHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
YD GCK C C+ GS K +CD GQC+C V G C
Sbjct: 770 GTYDLDGSSLFGCKDCNCDVGGSWKT--DCDKNSGQCKCHPRVTGRAC 815
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 107/253 (42%), Gaps = 60/253 (23%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEGRC 75
+ +G+ HC +C GP CE C + +Y +S + C C C S N+ +G C
Sbjct: 1870 SESGNEIHC-ECLPGYTGPRCESCANGFYGNPESPGDICKPCEC----SGNINPLEQGSC 1924
Query: 76 QCKPG--------VTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKG 123
+ G +G C+ C + FG+A C+SC+C G+++ CD G
Sbjct: 1925 DTRTGECLRCLNNTSGTACNLCAPGY--FGDAVELKNCQSCDCEEVGTLE----CDPHVG 1978
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------GS 173
QC + G R RCK D Y G S
Sbjct: 1979 QCTCHD-------------------NVIGERC---DRCKPDHYGFSSGVGCRACDCGAAS 2016
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
+ QC+ G C CKPGVTG +CDRC V+H+ + + GC C CN S C+ + G
Sbjct: 2017 NSTQCDDHNGNCACKPGVTGRQCDRCAVDHWKYHKEGCTPCNCNQGYS--RGFGCNPLNG 2074
Query: 233 QCECKDNVEGAQC 245
QCEC V G +C
Sbjct: 2075 QCECLPGVIGDRC 2087
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 123/316 (38%), Gaps = 103/316 (32%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G SN C +D E NR G GG C +CQ + G NC KC+ YY+ G
Sbjct: 333 CNCHGHSNECEYD-ETVNRKGLSLDIHGNYDGGGVCKNCQHNTVGTNCNKCKPKYYRPKG 391
Query: 51 DNF--------------------------------------------------CTACNCN 60
+ C C CN
Sbjct: 392 KYWNETDVCSPCQCDFFYSTGHCEEETGNCECRAAFQPPNCDSCAYGYYGYPNCRECECN 451
Query: 61 PIGSLNLQCNSEG--RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 118
G+ C +E +C CK G C +C +Y F E CK+CEC+ GS+ N +C
Sbjct: 452 LNGTNGYHCEAESGEQCPCKINFAGPYCKQCAEGYYGFPE--CKACECHKLGSITN--DC 507
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-------- 170
D G+C+ L++ G + E RCK Y
Sbjct: 508 DVNTGECKC--LTNFGGDNCE--------------------RCKHGYYSYPQCLYCDCDN 545
Query: 171 GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
G+ + CN + G+C C+ G G +CD+C +Y++ + CK C C+ GS T CD+
Sbjct: 546 QGTESEICNKQSGQCICREGFGGPRCDQCLPGYYNYPD--CKPCNCSSTGSSAIT--CDN 601
Query: 230 VKGQCECKDNVEGAQC 245
G+C C N G QC
Sbjct: 602 T-GKCNCLTNFAGRQC 616
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 103/236 (43%), Gaps = 37/236 (15%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
G C+ C+ GP C++C YY C CNC+ GS + C++ G+C C
Sbjct: 556 QSGQCI-CREGFGGPRCDQCLPGYYNYPD---CKPCNCSSTGSSAITCDNTGKCNCLTNF 611
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +C C +Y + + C C C+ G+ T N D GQC Q + GR +
Sbjct: 612 AGRQCTLCSAGYYSYPD--CLPCHCDLHGAEGVTCNAD---GQC-LCQPNFDGRQCDSCK 665
Query: 142 VQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ NF DPAG I C + P+G C+CK VTG
Sbjct: 666 -EGFYNFPSCEDCNCDPAG-VIDKFAGC--GSVPVGE------------LCKCKERVTGR 709
Query: 194 KCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CD C +++ + GC++C+C G++ C S GQC CK + +G +C+
Sbjct: 710 ICDECKPQYWNLNISNPDGCQNCDCWTDGTISALDTCASKSGQCPCKPHTQGRRCK 765
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 114/260 (43%), Gaps = 51/260 (19%)
Query: 22 HGGHCL-------------------DCQGDRDGPNCEKCRDNYYQKSGD---NFCTACNC 59
+GG+C+ +CQ G +CE+C YY + + + C C C
Sbjct: 1795 YGGYCIPCECNGHAETCDCATGICKECQHGTRGDHCEECVAGYYGNATNGSPHDCMICAC 1854
Query: 60 N-PIGSLNL-------QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNP 108
P S N + +E C+C PG TG +C+ C Y E+ CK CEC+
Sbjct: 1855 PLPFDSNNFATSCEISESGNEIHCECLPGYTGPRCESCANGFYGNPESPGDICKPCECSG 1914
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
+ +CD+ G+C ++ G T + + F A +L+ C+ D
Sbjct: 1915 NINPLEQGSCDTRTGECLRCLNNTSG---TACNLCAPGYFGDA----VELKNCQSCDCEE 1967
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
+G L+C+ G+C C V G++CDRC +HY F GC++C+C G+ N+
Sbjct: 1968 VG-----TLECDPHVGQCTCHDNVIGERCDRCKPDHYGFSSGVGCRACDC---GAASNST 2019
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD G C CK V G QC
Sbjct: 2020 QCDDHNGNCACKPGVTGRQC 2039
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 85/204 (41%), Gaps = 41/204 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G CL C + G C C Y+ + + C +C+C +G+L +C+ G+C C V
Sbjct: 1929 GECLRCLNNTSGTACNLCAPGYFGDAVELKNCQSCDCEEVGTL--ECDPHVGQCTCHDNV 1986
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G++CDRC +HY F GC++C+C G+ N+ CD G C + + GR
Sbjct: 1987 IGERCDRCKPDHYGFSSGVGCRACDC---GAASNSTQCDDHNGNC-ACKPGVTGR----- 2037
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCNS-EGRCQCKPG 189
RC D + G S CN G+C+C PG
Sbjct: 2038 ----------------QCDRCAVDHWKYHKEGCTPCNCNQGYSRGFGCNPLNGQCECLPG 2081
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSC 213
V GD+CD C + GC C
Sbjct: 2082 VIGDRCDACPNRWVLIKDEGCIEC 2105
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL CQ + DG C+ C++ +Y NF C CNC+P G ++ C S C+
Sbjct: 648 GQCL-CQPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 701
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK VTG CD C +++ + GC++C+C G++ C S GQC + ++
Sbjct: 702 CKERVTGRICDECKPQYWNLNISNPDGCQNCDCWTDGTISALDTCASKSGQC-PCKPHTQ 760
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
GR E + +D G+ ++ + C D GGS C+ + G+C+C P VTG
Sbjct: 761 GRRCKECK---DGTYDLDGSSLFGCKDCNCDV-----GGSWKTDCDKNSGQCKCHPRVTG 812
Query: 193 DKCDRCDVNHY 203
C + HY
Sbjct: 813 RACTQPLTTHY 823
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C P V GD C++C N Y F + GC+ C CN G CD G CEC+D
Sbjct: 1425 TTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECNCNYLGITNGNTQCDMFNGTCECRD 1484
Query: 239 NVEGAQC 245
++EG C
Sbjct: 1485 HIEGRAC 1491
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + GP C++C + YY G C AC C+ +GS+ C+ + G C+C GD C+
Sbjct: 470 CKINFAGPYCKQCAEGYY---GFPECKACECHKLGSITNDCDVNTGECKCLTNFGGDNCE 526
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y + + C C+C+ G+ C+ GQC + R L
Sbjct: 527 RCKHGYYSYPQ--CLYCDCDNQGTESEI--CNKQSGQCICREGFGGPRCDQCL------- 575
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P D + C GS + C++ G+C C G +C C +Y + +
Sbjct: 576 --PGYYNYPDCKPCN-----CSSTGSSAITCDNTGKCNCLTNFAGRQCTLCSAGYYSYPD 628
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C C+ G+ T N D GQC C+ N +G QC S
Sbjct: 629 --CLPCHCDLHGAEGVTCNAD---GQCLCQPNFDGRQCDS 663
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 85/206 (41%), Gaps = 53/206 (25%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+ GS + +C+ G +CQCKP V +C C +Y F + CK CEC P+ ++
Sbjct: 1368 CNCDYAGSTSFECHPFGGQCQCKPNVIERQCGSCKSRYYGFPD--CKRCEC-PSSAM--- 1421
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY-------- 166
C+ G+C N I DL +C +TY
Sbjct: 1422 --CEPTTGECMCPP-----------------------NVIGDLCEKCAPNTYGFHQVIGC 1456
Query: 167 ------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
LG N QC+ G C+C+ + G CD C +Y+F C C C+ G
Sbjct: 1457 EECNCNYLGITNG-NTQCDMFNGTCECRDHIEGRACDVCAHGYYEFPR--CGQCSCHKPG 1513
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD + G C CK NV G C
Sbjct: 1514 TELEV--CDKIDGSCFCKKNVVGRDC 1537
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 61/155 (39%), Gaps = 29/155 (18%)
Query: 71 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+ G C C P V GD C++C N Y F + GC+ C CN G CD G CE
Sbjct: 1425 TTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECNCNYLGITNGNTQCDMFNGTCEC-- 1482
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH------GGSLNLQCNSEGR 183
R H E R D + ++ RC G G L + +G
Sbjct: 1483 -----RDHIEGRA-----CDVCAHGYYEFPRC-------GQCSCHKPGTELEVCDKIDGS 1525
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
C CK V G CD+C Y+ + GC +C C
Sbjct: 1526 CFCKKNVVGRDCDQCIDGTYNLQDNNPDGCTTCFC 1560
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNY--YQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCK 78
H G+C C+ G C++C ++ Y K G CT CNCN S CN G+C+C
Sbjct: 2024 HNGNCA-CKPGVTGRQCDRCAVDHWKYHKEG---CTPCNCNQGYSRGFGCNPLNGQCECL 2079
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSC 104
PGV GD+CD C + GC C
Sbjct: 2080 PGVIGDRCDACPNRWVLIKDEGCIEC 2105
>gi|344290208|ref|XP_003416830.1| PREDICTED: netrin-1, partial [Loxodonta africana]
Length = 558
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 495
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCMRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
>gi|397494596|ref|XP_003818160.1| PREDICTED: netrin-1, partial [Pan paniscus]
Length = 527
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 264 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 323
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 324 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 382
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 383 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 418
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 208 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 260
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 261 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITH 320
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 321 RKACKACDCHPVGAAGKT--CNQTTGQC 346
>gi|358334367|dbj|GAA52816.1| laminin alpha 1/2, partial [Clonorchis sinensis]
Length = 3545
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 111/246 (45%), Gaps = 47/246 (19%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCN-SEGRC 75
G G C+ C + GP C+ C + + GD C CNC+ +GS++ C +G+C
Sbjct: 971 GTTGLCI-CGFNTAGPRCDACAEGTH---GDPLLGQACRPCNCHEMGSVSPTCRLGDGQC 1026
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT-PNCDSVKGQCESAQLSSRG 134
C+PG G +CDRC + +AGC C+C+P G+ +N P CD V GQC
Sbjct: 1027 TCRPGYEGVRCDRCVAGRGNV-DAGCPPCQCSPLGTQQNVRPPCDQVTGQC--------- 1076
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG---------HGGSLNLQCNSE-GRC 184
+ F G + D +C Y LG +++ C+ E GRC
Sbjct: 1077 --------VCKHGF---GGTL-DCSKCAPGYYSLGPDTCTECMCSSRAIDRVCDPEDGRC 1124
Query: 185 QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPA----GSVKNTPNCDSVKGQCECKDN 239
+C V G+ CD+C ++ + C +C+C G+V CD GQC C +
Sbjct: 1125 KCGENVVGNTCDKCKTGYFWNVTGPNCLACDCGIGTIIDGTVGGAVGCDMQTGQCRCAPH 1184
Query: 240 VEGAQC 245
V G QC
Sbjct: 1185 VTGRQC 1190
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 37/229 (16%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-------NLQCNSE-GRCQCKPGVTGDKC 86
G C+KC+ Y+ C AC+C IG++ + C+ + G+C+C P VTG +C
Sbjct: 1132 GNTCDKCKTGYFWNVTGPNCLACDCG-IGTIIDGTVGGAVGCDMQTGQCRCAPHVTGRQC 1190
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
C+ ++ GC+ C P G + CD + G+C + R E +
Sbjct: 1191 TECEPGYFGVSAKGCQPCPSCPNGQL-----CDQITGKCICPPNTQGDRC--EECTKGSW 1243
Query: 147 NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYD 204
+++P CK + +G + C+ G+C CK G TG CD+CD +Y
Sbjct: 1244 DYNPVAG-------CKDCNCSEVGSVSGADTTCDLVSGKCSCKRGYTGRACDQCDAGYY- 1295
Query: 205 FGEAGCKSCECNPAGSVKNTPN--------CDSVKGQCECKDNVEGAQC 245
G C+ CEC+PAGS++ PN C+ G C CK NV+G +C
Sbjct: 1296 -GYPNCRPCECDPAGSLR--PNGTESTITLCNPADGSCFCKANVQGERC 1341
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 94/225 (41%), Gaps = 40/225 (17%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY- 94
+C KC YY G + CT C C+ +++ C+ E GRC+C V G+ CD+C ++
Sbjct: 1087 DCSKCAPGYY-SLGPDTCTECMCSS-RAIDRVCDPEDGRCKCGENVVGNTCDKCKTGYFW 1144
Query: 95 DFGEAGCKSCECNPA----GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
+ C +C+C G+V CD GQC A + GR TE
Sbjct: 1145 NVTGPNCLACDCGIGTIIDGTVGGAVGCDMQTGQCRCAPHVT-GRQCTE----------- 1192
Query: 151 AGNRIWDLRRCKRDTYPLGHGG--------SLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C+ + + G + L G+C C P GD+C+ C
Sbjct: 1193 ----------CEPGYFGVSAKGCQPCPSCPNGQLCDQITGKCICPPNTQGDRCEECTKGS 1242
Query: 203 YDFGE-AGCKSCECNPAGSVKNT-PNCDSVKGQCECKDNVEGAQC 245
+D+ AGCK C C+ GSV CD V G+C CK G C
Sbjct: 1243 WDYNPVAGCKDCNCSEVGSVSGADTTCDLVSGKCSCKRGYTGRAC 1287
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 81/212 (38%), Gaps = 69/212 (32%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL---NLQCN-SEGRCQCKPGVTG 83
+ QGDR CE+C + + C CNC+ +GS+ + C+ G+C CK G TG
Sbjct: 1229 NTQGDR----CEECTKGSWDYNPVAGCKDCNCSEVGSVSGADTTCDLVSGKCSCKRGYTG 1284
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
CD+CD +Y G C+ CEC+PAGS++
Sbjct: 1285 RACDQCDAGYY--GYPNCRPCECDPAGSLR------------------------------ 1312
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
P G ++ L ++G C CK V G++CD C +
Sbjct: 1313 -----------------------PNGTESTITLCNPADGSCFCKANVQGERCDECKPGTF 1349
Query: 204 DFG---EAGCKSCECNPAGSVKNTPNCDSVKG 232
GC +C C P+ P C + G
Sbjct: 1350 GLNIDYPLGCYTCFCFPSN---QKPKCSLLTG 1378
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 1 CNCNGFSNRCFFDKELYN-RTGH--------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G ++ C F++ + N R GG C+DC+ D G NCE C+ YY+
Sbjct: 348 CNCHGKADSCVFNQTVANLRLSQRKDGVFEGGGVCVDCREDTTGINCESCKPGYYRPVHV 407
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSE--------GRCQCKPGVTGDKCDRCDVNH--YDF 96
N C C C+ GS + ++E G C CK G G +CD+C + D
Sbjct: 408 RPDSPNPCVRCECDTAGSTGVCVSNEREIPNRYPGDCICKEGFAGKRCDQCAEGYRRSDT 467
Query: 97 GEAGCKSCECNPAGS 111
+ C +C C+ GS
Sbjct: 468 DPSKCVACTCDVRGS 482
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 26/139 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C C+G S+ C G C C G+ GP+C +C + Y+ K G C C
Sbjct: 1670 CRCHGMSSHC---------DPVTGVCQACTGNTVGPDCGQCAEGYFGDPKKGQT-CVKCQ 1719
Query: 59 CNPIGSLNLQCN---------SEGRCQCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECN 107
C P + +C CKPG TG +C+RC ++ C+ CEC+
Sbjct: 1720 C-PTEQTDYAITCTPFQDRPYVAHQCVCKPGYTGPRCERCAPGYFGDPLSMIACQPCECD 1778
Query: 108 PAGSVKNTPNCDSVKGQCE 126
+GS + NCD G C+
Sbjct: 1779 VSGS--KSANCDQRTGACD 1795
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 95/250 (38%), Gaps = 69/250 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGD-NFCTACNCNPIGSLNLQCNSEGRC----- 75
G C DCQ + G CE C +Y KSG + C C C NL G C
Sbjct: 863 GKCTDCQHNTAGDKCELCAPGFYGDPKSGSPSACQPCECP-----NLANKKTGSCVANEQ 917
Query: 76 ------------QCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSV 121
C+ G C+ C +Y E G C+ C+C + C+
Sbjct: 918 APPTDLRPYLCLDCEDYTRGRYCELCIEGYYGQPEKGIPCQKCDCG-----RGAIGCNGT 972
Query: 122 KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL----------G 169
G C F+ AG R C T+ PL
Sbjct: 973 TGLCICG-------------------FNTAGPRC---DACAEGTHGDPLLGQACRPCNCH 1010
Query: 170 HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT-PNC 227
GS++ C +G+C C+PG G +CDRC + +AGC C+C+P G+ +N P C
Sbjct: 1011 EMGSVSPTCRLGDGQCTCRPGYEGVRCDRCVAGRGNV-DAGCPPCQCSPLGTQQNVRPPC 1069
Query: 228 DSVKGQCECK 237
D V GQC CK
Sbjct: 1070 DQVTGQCVCK 1079
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 183 RCQCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
+C CKPG TG +C+RC ++ C+ CEC+ +GS + NCD G C+C +
Sbjct: 1743 QCVCKPGYTGPRCERCAPGYFGDPLSMIACQPCECDVSGS--KSANCDQRTGACDCWPGI 1800
Query: 241 EGAQC 245
+G +C
Sbjct: 1801 QGRRC 1805
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQ 76
+ H C+ GP CE+C Y+ GD C C C+ GS + C+ G C
Sbjct: 1739 YVAHQCVCKPGYTGPRCERCAPGYF---GDPLSMIACQPCECDVSGSKSANCDQRTGACD 1795
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C PG+ G +CD+C+ +H +AG C+ C G + D VK Q ++ ++S
Sbjct: 1796 CWPGIQGRRCDQCEPDH--VVDAGRCRDCRGPCTGEL--LIKADEVKSQIDNLNMTS 1848
>gi|81916437|sp|Q924Z9.1|NET1_RAT RecName: Full=Netrin-1; Flags: Precursor
gi|14148768|gb|AAK17014.1| netrin-1 [Rattus norvegicus]
Length = 604
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 460 TTAASSMEEPEDCDSYCKASKGKLKMNMKKYCRKDY 495
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
>gi|405975891|gb|EKC40422.1| Laminin subunit beta-1 [Crassostrea gigas]
Length = 340
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL--QCNSE-GRCQCKPG 80
G CL C + +G +CEKC+ YY S C C C+P G+ C+ E G+C C P
Sbjct: 93 GECLKCLFNTEGFSCEKCKPGYYGDSTTQSCVECVCDPYGTDRSAGSCDRETGQCPCLPN 152
Query: 81 VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
VTG +CD C +++ GC +C C+P GS+ T C+ GQC+ Q RG
Sbjct: 153 VTGLRCDACLAGYWNITSGEGCSACGCDPEGSLGIT--CNQFDGQCDCQQ--ERG----- 203
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
K+ + W + + GS ++QC+ G+C C G++G KCDRC
Sbjct: 204 -----GKDCSQCEDLYWGDPKVQCTAGDCNGQGSADMQCDRRTGQCVCLTGISGYKCDRC 258
Query: 199 D 199
D
Sbjct: 259 D 259
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 47/232 (20%)
Query: 35 GPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEGRC--------QCKPGVTGD 84
GPNC+ C +NY+ ++ C C CN N+ + +G C +C G
Sbjct: 50 GPNCDTCAENYFGNPLVANSTCEPCLCNN----NIDPHVDGSCDTSSGECLKCLFNTEGF 105
Query: 85 KCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C++C +Y D C C C+P G+ ++ +CD GQC + R L
Sbjct: 106 SCEKCKPGYYGDSTTQSCVECVCDPYGTDRSAGSCDRETGQCPCLPNVTGLRCDACL--- 162
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHG---------GSLNLQCNS-EGRCQCKPGVTGD 193
AG W++ G G GSL + CN +G+C C+ G
Sbjct: 163 -------AG--YWNITS--------GEGCSACGCDPEGSLGITCNQFDGQCDCQQERGGK 205
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +C+ ++ + C + +CN GS CD GQC C + G +C
Sbjct: 206 DCSQCEDLYWGDPKVQCTAGDCNGQGSADM--QCDRRTGQCVCLTGISGYKC 255
>gi|332247811|ref|XP_003273054.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-3 [Nomascus
leucogenys]
Length = 1170
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C+CNG S C FD ++ ++ +GG C +C+ +G NCE+C+ +Y++ S
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGVSIQET 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ G+C CK V G++CD C A GC C+CN
Sbjct: 376 CIPCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNI 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGR----VHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
GS ++ P CD G C + ++ S + +P C D
Sbjct: 436 LGSRRDMP-CDEESGHCLCLPNVVGPKCDQCAPYHWKLASGQGCEP----------CACD 484
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH-----YDFGEAGCKSCECNPA 218
+ SL+ QCN G+C C+ G G C + Y GC++C+C+
Sbjct: 485 PH-----NSLSPQCNQFTGQCPCREGFGGLTCSAAAIRQCPDRTYGDAATGCRACDCDFR 539
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD G+C C+ + G++C
Sbjct: 540 GT--EGPGCDKASGRCLCRPGLTGSRC 564
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 36/191 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C C+CN +GS ++ C+ E G C C P
Sbjct: 397 GQCV-CKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDMPCDEESGHCLCLP 455
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C H+ GC+ C C+P S+ +P C+ GQC
Sbjct: 456 NVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSL--SPQCNQFTGQCPC----------- 502
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-----------SEGRCQCK 187
R+ F +R+C TY G C+ + GRC C+
Sbjct: 503 ------REGFGGLTCSAAAIRQCPDRTYGDAATGCRACDCDFRGTEGPGCDKASGRCLCR 556
Query: 188 PGVTGDKCDRC 198
PG+TG +CD+C
Sbjct: 557 PGLTGSRCDQC 567
>gi|297489728|ref|XP_002697843.1| PREDICTED: laminin subunit alpha-1 [Bos taurus]
gi|296473778|tpg|DAA15893.1| TPA: laminin, alpha 1-like [Bos taurus]
Length = 3030
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 98/242 (40%), Gaps = 59/242 (24%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G C++C YY C CNC+ GSL+ C EG C C PGV G+KCD
Sbjct: 876 ECKPHVTGQRCDQCLYGYYGLETGLGCLPCNCSA-GSLSDDCTPEGHCLCVPGVAGEKCD 934
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y + + GC C+C +NT CD G+C
Sbjct: 935 RCARGFYSYQDGGCTPCDC---AHTQNT--CDPETGECVC-------------------- 969
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGS-LNLQCNS----------------EGRCQCKPGV 190
P R C GH G L L C + G C+CKP
Sbjct: 970 --PPHTRGAACEECAD-----GHWGHDLELGCQACNCSSVGAASQRCDVVTGHCRCKPAF 1022
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGA 243
G C++C + F + C +C+C+P G++ +T + C G C CK+NV G
Sbjct: 1023 GGRTCEQCSPGYKGFPD--CMACDCDPRGTLADTCDQEQGLCSCAQETGACSCKENVAGP 1080
Query: 244 QC 245
QC
Sbjct: 1081 QC 1082
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 106/263 (40%), Gaps = 59/263 (22%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCN 60
N FS C D G C C G CE+C D YY GD+ C ACNC+
Sbjct: 754 NNFSPTCHLDD------GDEVVCDQCAPGYMGDWCERCADGYYGNPTVPGDS-CVACNCS 806
Query: 61 PIGSLNL----QCNS-EGRC-QCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSV 112
G+++L C+S G C +C G C+RC Y C++CEC+ GS+
Sbjct: 807 --GNVDLLEPGSCDSVTGECLRCLGNTDGPHCERCADGFYGDAVTAKNCRACECHGQGSL 864
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG- 171
C G CE + H G R +C Y L G
Sbjct: 865 SAV--CHPETGLCEC-------KPHV------------TGQRC---DQCLYGYYGLETGL 900
Query: 172 ---------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
GSL+ C EG C C PGV G+KCDRC Y + + GC C+C +
Sbjct: 901 GCLPCNCSAGSLSDDCTPEGHCLCVPGVAGEKCDRCARGFYSYQDGGCTPCDC---AHTQ 957
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
NT CD G+C C + GA C
Sbjct: 958 NT--CDPETGECVCPPHTRGAAC 978
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 27/133 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+++ N+ GG C+ C + G NCE C D YY+ G
Sbjct: 327 CNCHNKAKDCYYDEDVANQRRSLNIAGQFRGGGVCIGCLQNTMGVNCETCVDGYYRPHGV 386
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE--------GRC--QCKPGVTGDKCDRCDVNHYDF 96
D+ C C+C+P+GSLN C + G C V G CDRC Y+
Sbjct: 387 SPYEDHPCRPCDCDPVGSLNSVCIKDDLHSDLHRGTCFISVLENVEGSHCDRCKPGFYNL 446
Query: 97 GEA---GCKSCEC 106
E GC C C
Sbjct: 447 EEKNPQGCSECFC 459
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 106/242 (43%), Gaps = 37/242 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSL--------NLQCNSE 72
G C CQ + G +CE+C +Y + C C C P+ + +L E
Sbjct: 709 GVCFACQHNTTGEHCERCLPGFYGLPSRGTPGDCQPCAC-PLSTASNNFSPTCHLDDGDE 767
Query: 73 GRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C QC PG GD C+RC +Y C +C C+ + +CDSV G+C
Sbjct: 768 VVCDQCAPGYMGDWCERCADGYYGNPTVPGDSCVACNCSGNVDLLEPGSCDSVTGECLRC 827
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-GSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ HG GSL+ C+ E G C+C
Sbjct: 828 LGNTDGP-HCE---RCADGFYGDAVTAKNCRACE------CHGQGSLSAVCHPETGLCEC 877
Query: 187 KPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN--TPNCDSVKGQCECKDNVEGA 243
KP VTG +CD+C +Y GC C C+ AGS+ + TP +G C C V G
Sbjct: 878 KPHVTGQRCDQCLYGYYGLETGLGCLPCNCS-AGSLSDDCTP-----EGHCLCVPGVAGE 931
Query: 244 QC 245
+C
Sbjct: 932 KC 933
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCK 78
H C C +G CE+C YY + + C C+C+P GS++ C+ G+C C+
Sbjct: 1425 HDFRCDACFVGYEGQYCERCSSGYYGNPRMPGSTCQRCDCSPHGSVHSDCDRGSGQCICR 1484
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
PG TG +C C+ H E+ C SC+ + G + N
Sbjct: 1485 PGATGLRCGDCEPRHI-LVESDCVSCDDDCVGVLLN 1519
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 23/137 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
CNCN S+ C D E G CL+C + G +C+ C YY K + C+ C
Sbjct: 1356 CNCNNHSDTC--DPE-------TGKCLNCGHNTTGDHCDTCAPGYYGKVTGSASDCSPCT 1406
Query: 59 C--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNP 108
C + S + C EG RC C G G C+RC +Y + C+ C+C+P
Sbjct: 1407 CPHSLPASYSPTCILEGDHDFRCDACFVGYEGQYCERCSSGYYGNPRMPGSTCQRCDCSP 1466
Query: 109 AGSVKNTPNCDSVKGQC 125
GSV + +CD GQC
Sbjct: 1467 HGSVHS--DCDRGSGQC 1481
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 54/138 (39%), Gaps = 24/138 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE----------G 73
GHC C+ G CE+C Y G C AC+C+P G+L C+ E G
Sbjct: 1014 GHC-RCKPAFGGRTCEQCSPGY---KGFPDCMACDCDPRGTLADTCDQEQGLCSCAQETG 1069
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C CK V G +C C + +A GC C C + C +G +
Sbjct: 1070 ACSCKENVAGPQCGECRAGTFALDKADPRGCTPCFCFGLSQL-----CSEAQGYVRTP-- 1122
Query: 131 SSRGRVHTELRVQSRKNF 148
+ G LRV S+ N
Sbjct: 1123 VTLGSDQPLLRVVSQSNL 1140
>gi|410515422|ref|NP_446183.2| netrin-1 precursor [Rattus norvegicus]
Length = 604
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 460 TTAASSMEEPEDCDSYCKASKGKLKMNMKKYCRKDY 495
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
>gi|334348518|ref|XP_003342069.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-4-like
[Monodelphis domestica]
Length = 1762
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 73/145 (50%), Gaps = 21/145 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
CNCNG S C FD LY + GG C DCQ + G +C++C+ +Y+ S +
Sbjct: 332 CNCNGHSEHCHFDMSLYLSSNGISGGMCEDCQHNTMGQHCDQCKPLFYRDPLKAISDPHA 391
Query: 54 CTACNCNPIGSLN-LQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C C+P GSL+ C S G+C CK V G +CD+C +Y G
Sbjct: 392 CIPCECDPEGSLSGGMCESYPDPALGIEAGQCLCKDNVGGAQCDQCKPGYYGLNANDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQC 125
C+ C CNP GS+ + CD V G+C
Sbjct: 452 CQPCNCNPLGSIPFS-ICDVVTGRC 475
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 106/266 (39%), Gaps = 37/266 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C+G G NCE+C D YY S C C C
Sbjct: 864 CPCNGFAELC--DPE-------TGSCFNCKGFTAGLNCERCIDGYYGNPSSGQPCVPCQC 914
Query: 60 NPIGSLNL---------QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECN 107
+ S N E C C+ G TG CD C Y C C CN
Sbjct: 915 PDVPSSNQYFARSCYQNSWTLEVICNCQEGYTGIHCDECSNGFYGNPRISGECCLPCPCN 974
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR-----IWDLRRCK 162
+ +C S G+C ++ G + F A + +L
Sbjct: 975 NNIDRTDPESCSSSTGECLKCLYNTHG---PNCQFCKPGYFGSAPTQNCKRCTCNLSGVN 1031
Query: 163 RDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGS 220
R T P+G G L C+ + G C C P V G CD+C +++ GC+ CEC+P S
Sbjct: 1032 RTTCPMGDGACL---CDPTTGSCPCLPNVVGLACDQCAEGYWNLVPGKGCQFCECDPENS 1088
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQCR 246
++ +C+ GQC CK G C
Sbjct: 1089 --HSTHCNQFTGQCPCKLGYGGKHCH 1112
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
Query: 170 HGGSLNLQCNSEG-----------RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
H G++ +C+S+G +CQCKP VTG CD+C V Y G GC SCEC+P
Sbjct: 764 HNGAVACKCHSQGSIASSCSKLGGQCQCKPQVTGRCCDKCSVGTYGLGHHGCHSCECHPQ 823
Query: 219 GSVKNTPNCDSVKGQCECKDNVEG 242
GS CD V GQC C N+EG
Sbjct: 824 GSKSTI--CDQVTGQCSCLQNIEG 845
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 112/277 (40%), Gaps = 85/277 (30%)
Query: 1 CNCNGFSNRC----FFDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYY-------QK 48
C CNG + C ++++ G G C+ CQ + DGPNCE+C++ ++ +
Sbjct: 265 CFCNGHAKECGPIQHVRGDVFSPPGMVHGQCI-CQHNTDGPNCERCKEFFHDVPWRPAEG 323
Query: 49 SGDNFCTACNCNPIG-------SLNLQCN--SEGRCQ-CKPGVTGDKCDRCDVNHY-DFG 97
DN C +CNCN SL L N S G C+ C+ G CD+C Y D
Sbjct: 324 LQDNACRSCNCNGHSEHCHFDMSLYLSSNGISGGMCEDCQHNTMGQHCDQCKPLFYRDPL 383
Query: 98 EA-----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
+A C CEC+P GS+ G CES DPA
Sbjct: 384 KAISDPHACIPCECDPEGSLSG--------GMCESYP-------------------DPA- 415
Query: 153 NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 209
L ++ G+C CK V G +CD+C +Y G
Sbjct: 416 ---------------------LGIEA---GQCLCKDNVGGAQCDQCKPGYYGLNANDPLG 451
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C+ C CNP GS+ + CD V G+C C+ V G C
Sbjct: 452 CQPCNCNPLGSIPFS-ICDVVTGRCLCQPFVTGPHCE 487
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N AC C+ GS+ C+ G +CQCKP VTG CD+C V Y G GC SCEC+P G
Sbjct: 765 NGAVACKCHSQGSIASSCSKLGGQCQCKPQVTGRCCDKCSVGTYGLGHHGCHSCECHPQG 824
Query: 111 SVKNTPNCDSVKGQCESAQ 129
S CD V GQC Q
Sbjct: 825 SKSTI--CDQVTGQCSCLQ 841
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 89/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN---------PIGSLNLQCN-SEG 73
G CL C + GPNC+ C+ Y+ + C C CN P+G C+ + G
Sbjct: 990 GECLKCLYNTHGPNCQFCKPGYFGSAPTQNCKRCTCNLSGVNRTTCPMGDGACLCDPTTG 1049
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P V G CD+C +++ GC+ CEC+P S ++ +C+ GQC
Sbjct: 1050 SCPCLPNVVGLACDQCAEGYWNLVPGKGCQFCECDPENS--HSTHCNQFTGQCP------ 1101
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1102 ----------------------------CK-----LGYGGK------------------- 1109
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +C+ N+Y + C +C+CN G+ TP CD G C C+ V G C
Sbjct: 1110 -HCHKCEENYYADSQMQCIACKCNKEGT--QTPICDQETGSCLCRAGVTGQFC 1159
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
CNCN + F ++ G CL CQ GP+CEKC D Y+ +S + C+ C+C
Sbjct: 455 CNCNPLGSIPFSICDVVT-----GRCL-CQPFVTGPHCEKCLDGYWGLESHQHGCSPCDC 508
Query: 60 NPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 94
+ G+ + C+ +G+C+C+P V G +C + ++
Sbjct: 509 DVGGAYSNLCSPHDGQCECRPHVIGHQCTEPEPGYF 544
>gi|358418685|ref|XP_003584020.1| PREDICTED: laminin subunit alpha-1 [Bos taurus]
Length = 3030
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 98/242 (40%), Gaps = 59/242 (24%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G C++C YY C CNC+ GSL+ C EG C C PGV G+KCD
Sbjct: 876 ECKPHVTGQRCDQCLYGYYGLETGLGCLPCNCSA-GSLSDDCTPEGHCLCVPGVAGEKCD 934
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y + + GC C+C +NT CD G+C
Sbjct: 935 RCARGFYSYQDGGCTPCDC---AHTQNT--CDPETGECVC-------------------- 969
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGS-LNLQCNS----------------EGRCQCKPGV 190
P R C GH G L L C + G C+CKP
Sbjct: 970 --PPHTRGAACEECAD-----GHWGHDLELGCQACNCSSVGAASQRCDVVTGHCRCKPAF 1022
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGA 243
G C++C + F + C +C+C+P G++ +T + C G C CK+NV G
Sbjct: 1023 GGRTCEQCSPGYKGFPD--CMACDCDPRGTLADTCDQEQGLCSCAQETGACSCKENVAGP 1080
Query: 244 QC 245
QC
Sbjct: 1081 QC 1082
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 106/263 (40%), Gaps = 59/263 (22%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCN 60
N FS C D G C C G CE+C D YY GD+ C ACNC+
Sbjct: 754 NNFSPTCHLDD------GDEVVCDQCAPGYMGDWCERCADGYYGNPTVPGDS-CVACNCS 806
Query: 61 PIGSLNL----QCNS-EGRC-QCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSV 112
G+++L C+S G C +C G C+RC Y C++CEC+ GS+
Sbjct: 807 --GNVDLLEPGSCDSVTGECLRCLGNTDGPHCERCADGFYGDAVTAKNCRACECHGQGSL 864
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG- 171
C G CE + H G R +C Y L G
Sbjct: 865 SAV--CHPETGLCEC-------KPHV------------TGQRC---DQCLYGYYGLETGL 900
Query: 172 ---------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
GSL+ C EG C C PGV G+KCDRC Y + + GC C+C +
Sbjct: 901 GCLPCNCSAGSLSDDCTPEGHCLCVPGVAGEKCDRCARGFYSYQDGGCTPCDC---AHTQ 957
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
NT CD G+C C + GA C
Sbjct: 958 NT--CDPETGECVCPPHTRGAAC 978
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 27/133 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+++ N+ GG C+ C + G NCE C D YY+ G
Sbjct: 327 CNCHNKAKDCYYDEDVANQRRSLNIAGQFRGGGVCIGCLQNTMGVNCETCVDGYYRPHGV 386
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE--------GRC--QCKPGVTGDKCDRCDVNHYDF 96
D+ C C+C+P+GSLN C + G C V G CDRC Y+
Sbjct: 387 SPYEDHPCRPCDCDPVGSLNSVCIKDDLHSDLHRGTCFISVLENVEGSHCDRCKPGFYNL 446
Query: 97 GEA---GCKSCEC 106
E GC C C
Sbjct: 447 EEKNPQGCSECFC 459
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 106/242 (43%), Gaps = 37/242 (15%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSL--------NLQCNSE 72
G C CQ + G +CE+C +Y + C C C P+ + +L E
Sbjct: 709 GVCFACQHNTTGEHCERCLPGFYGLPSRGTPGDCQPCAC-PLSTASNNFSPTCHLDDGDE 767
Query: 73 GRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C QC PG GD C+RC +Y C +C C+ + +CDSV G+C
Sbjct: 768 VVCDQCAPGYMGDWCERCADGYYGNPTVPGDSCVACNCSGNVDLLEPGSCDSVTGECLRC 827
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-GSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ HG GSL+ C+ E G C+C
Sbjct: 828 LGNTDGP-HCE---RCADGFYGDAVTAKNCRACE------CHGQGSLSAVCHPETGLCEC 877
Query: 187 KPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN--TPNCDSVKGQCECKDNVEGA 243
KP VTG +CD+C +Y GC C C+ AGS+ + TP +G C C V G
Sbjct: 878 KPHVTGQRCDQCLYGYYGLETGLGCLPCNCS-AGSLSDDCTP-----EGHCLCVPGVAGE 931
Query: 244 QC 245
+C
Sbjct: 932 KC 933
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCK 78
H C C +G CE+C YY + + C C+C+P GS++ C+ G+C C+
Sbjct: 1425 HDFRCDACFVGYEGQYCERCSSGYYGNPRMPGSTCQRCDCSPHGSVHSDCDRGSGQCICR 1484
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
PG TG +C C+ H E+ C SC+ + G + N
Sbjct: 1485 PGATGLRCGDCEPRHI-LVESDCVSCDDDCVGVLLN 1519
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 23/137 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
CNCN S+ C D E G CL+C + G +C+ C YY K + C+ C
Sbjct: 1356 CNCNNHSDTC--DPE-------TGKCLNCGHNTTGDHCDTCAPGYYGKVTGSASDCSPCT 1406
Query: 59 C--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNP 108
C + S + C EG RC C G G C+RC +Y + C+ C+C+P
Sbjct: 1407 CPHSLPASYSPTCILEGDHDFRCDACFVGYEGQYCERCSSGYYGNPRMPGSTCQRCDCSP 1466
Query: 109 AGSVKNTPNCDSVKGQC 125
GSV + +CD GQC
Sbjct: 1467 HGSVHS--DCDRGSGQC 1481
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 17/96 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE----------G 73
GHC C+ G CE+C Y G C AC+C+P G+L C+ E G
Sbjct: 1014 GHC-RCKPAFGGRTCEQCSPGY---KGFPDCMACDCDPRGTLADTCDQEQGLCSCAQETG 1069
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
C CK V G +C C + +A GC C C
Sbjct: 1070 ACSCKENVAGPQCGECRAGTFALDKADPRGCTPCFC 1105
>gi|148613884|ref|NP_004813.2| netrin-1 precursor [Homo sapiens]
gi|229462906|sp|O95631.2|NET1_HUMAN RecName: Full=Netrin-1; AltName: Full=Epididymis tissue protein Li
131P; Flags: Precursor
gi|317040170|gb|ADU87650.1| epididymis secretory sperm binding protein Li 131P [Homo sapiens]
gi|410287090|gb|JAA22145.1| netrin 1 [Pan troglodytes]
Length = 604
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 495
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
>gi|432944094|ref|XP_004083319.1| PREDICTED: netrin-4-like [Oryzias latipes]
Length = 656
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 23/139 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CNG + C FD + +G GG C DC + +G C+KC+ +++ ++ +
Sbjct: 366 CKCNGHAQSCRFDWTAWRESGQRSGGIC-DCLHNTEGRQCQKCKAGFHRDPRRPQTAPDS 424
Query: 54 CTACNCNPIGSLNLQCN-------SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS+ S G C CKPGV G++CDRC V ++ F E GC+ C+C
Sbjct: 425 CKPCSCHPMGSILYNSTDGSTCDPSNGNCICKPGVGGERCDRCMVGYWGFHEYGCRPCDC 484
Query: 107 NPAGSVKNTPNCDSVKGQC 125
AG +CD G C
Sbjct: 485 --AG------DCDPFTGDC 495
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G++CDRC V ++ F E GC+ C+C AG +CD G C
Sbjct: 449 SNGNCICKPGVGGERCDRCMVGYWGFHEYGCRPCDC--AG------DCDPFTGDC 495
>gi|344292000|ref|XP_003417716.1| PREDICTED: netrin-3-like [Loxodonta africana]
Length = 571
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 302 CSCNGHTRRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRHA 361
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 362 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 398
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 34/149 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSGD---N 52
C CNG ++RC D + H + DCQ +GP+C +C+ Y +Q++ +
Sbjct: 246 CKCNGHASRCLLDAQ--------SHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATTREAH 297
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 298 ACLACSCNGHTRRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 357
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 358 DRHACRACDCHPVGAAGKT--CNQTTGQC 384
>gi|297283282|ref|XP_002802409.1| PREDICTED: netrin-3-like [Macaca mulatta]
Length = 577
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 407
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESH 306
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 366
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C++C+C+P G+ T C+ GQC
Sbjct: 367 DRRACRACDCHPVGAAGKT--CNQTTGQCP 394
>gi|190339196|gb|AAI63582.1| Ntn4 protein [Danio rerio]
Length = 593
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 17/132 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CNG + C FD+ ++ R+G HGG C DC + G +C+ C+ +Y+ + +
Sbjct: 317 CKCNGHAESCHFDESIWLRSGQQHGGVC-DCLHNTTGQHCQHCQSGFYRDPEKPSTAPDS 375
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
CT C CN +GS + ++ G C CKPGV G C++C + ++ E GCK C+C AG
Sbjct: 376 CTPCMCNHVGSSYCKPDN-GECVCKPGVAGRHCEQCMLGYWGLDEYGCKPCQC--AG--- 429
Query: 114 NTPNCDSVKGQC 125
+CD G C
Sbjct: 430 ---DCDPYTGDC 438
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G C CKPGV G C++C + ++ E GCK C+C AG +CD G C +
Sbjct: 394 GECVCKPGVAGRHCEQCMLGYWGLDEYGCKPCQC--AG------DCDPYTGDCMIR 441
>gi|112363094|ref|NP_032770.2| netrin-1 precursor [Mus musculus]
gi|341942243|sp|O09118.3|NET1_MOUSE RecName: Full=Netrin-1; Flags: Precursor
gi|148678499|gb|EDL10446.1| netrin 1 [Mus musculus]
gi|223461232|gb|AAI41295.1| Netrin 1 [Mus musculus]
Length = 604
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKMNMKKYCRKDY 495
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
>gi|158289139|ref|XP_566169.3| AGAP000224-PA [Anopheles gambiae str. PEST]
Length = 352
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
CNCNG + RC F+ ELY +G GG CL C+ G +C CR+ +Y+ +
Sbjct: 4 CNCNGHARRCRFNMELYKMSGRISGGVCLSCRHATTGRHCHYCREGFYRDATKPITHRKV 63
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+PIGS CN + G+C CK GVTG C+RC
Sbjct: 64 CKACDCHPIGSSGKTCNHTTGQCPCKDGVTGLTCNRC 100
>gi|441659620|ref|XP_003269111.2| PREDICTED: uncharacterized protein LOC100591655 [Nomascus
leucogenys]
Length = 782
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 513 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 572
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 573 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 609
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 34/149 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 457 CKCNGHASRCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESH 508
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 509 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 568
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 569 DRRACRACDCHPVGAAGKT--CNQTTGQC 595
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C Y D G A C++C+C+P G+ T C+ GQC CKD
Sbjct: 543 CRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKT--CNQTTGQCPCKDG 600
Query: 240 VEGAQC 245
V G C
Sbjct: 601 VTGLTC 606
>gi|1730293|gb|AAC52971.1| Netrin-1 [Mus musculus]
Length = 603
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ G
Sbjct: 340 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKA 399
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 400 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 458
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 459 TTAASSVEEPEDCDSYCKASKGKLKMNMKKYCRKDY 494
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 284 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 336
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C Y D G+
Sbjct: 337 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITH 396
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 397 RKACKACDCHPVGAAGKT--CNQTTGQC 422
>gi|326927992|ref|XP_003210170.1| PREDICTED: netrin-4-like [Meleagris gallopavo]
Length = 638
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 14/120 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
C C+ ++ C FD ++ +G GG C +C+ + +G C +C+ YY+ G
Sbjct: 335 CRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCHRCKPGYYRDRGKPMSSAEV 394
Query: 54 CTACNCNPIGSLNLQCNSEGRCQ-------CKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C P+GS N + RC CKPGV G CDRC + ++ FGE GC+ C+C
Sbjct: 395 CKPCSCQPMGSANATFSRSWRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGENGCRPCDC 454
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 87/245 (35%), Gaps = 90/245 (36%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH-----GGHCLDCQGDRDGPNCEKCRDNY---YQKSGD- 51
C CNG + C EL NRTG G C+ C + G +CEKC Y K GD
Sbjct: 270 CFCNGHAEEC----ELANRTGEVENVVHGKCV-CSHNTAGDHCEKCAPLYNDQPWKPGDG 324
Query: 52 -----NFCTACNCNPIGS-----LNLQCNSEGRC-----QCKPGVTGDKCDRCDVNHY-D 95
N C C C+ L++ S R CK G +C RC +Y D
Sbjct: 325 KSGAPNECKKCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCHRCKPGYYRD 384
Query: 96 FGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
G+ CK C C P GS T
Sbjct: 385 RGKPMSSAEVCKPCSCQPMGSANAT----------------------------------- 409
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
+R W RC T G C CKPGV G CDRC + ++ FGE GC
Sbjct: 410 -FSRSW---RCHPKT----------------GFCYCKPGVAGPNCDRCLMGYWGFGENGC 449
Query: 211 KSCEC 215
+ C+C
Sbjct: 450 RPCDC 454
>gi|156320366|ref|XP_001618170.1| hypothetical protein NEMVEDRAFT_v1g155465 [Nematostella vectensis]
gi|156197830|gb|EDO26070.1| predicted protein [Nematostella vectensis]
Length = 239
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 98/217 (45%), Gaps = 36/217 (16%)
Query: 56 ACNCNPIGSLNL-QCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
AC+C+P+GS L +C G +C+CKPGV G C RC Y+ GC+ C+C SV
Sbjct: 12 ACSCDPLGSRTLSECEPYGGQCRCKPGVEGRDCGRCKPGFYNMTSEGCRPCDCKGPNSV- 70
Query: 114 NTPNCDSVKGQCESAQLSSRGRV--------HTELRVQSRKNFDPAGNRI-WDLRRCKRD 164
CD V G+CE ++ GR T+ ++S + D N + +C
Sbjct: 71 ----CDPVSGECE-CPANTVGRTCEPCQCNNSTDKCLRSGECRDCQHNTTGFYCDKCVTG 125
Query: 165 TYPLG----------------HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
TY +G S +L + G+C CK V G C RC V+ Y FG A
Sbjct: 126 TYGNATAQQCKGKQISCDCNVNGSSSSLCDHVTGQCSCKENVVGRDCSRCKVSSYGFGPA 185
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C CN GS + CD G C C V G +C
Sbjct: 186 GCTECACNVHGSA--SLQCDD-SGVCPCNLEVIGTKC 219
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 102/244 (41%), Gaps = 54/244 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC- 59
C+C+ +R + E Y GG C C+ +G +C +C+ +Y + + C C+C
Sbjct: 13 CSCDPLGSRTLSECEPY-----GGQC-RCKPGVEGRDCGRCKPGFYNMTSEG-CRPCDCK 65
Query: 60 ------NPI-GSLNLQCNSEGR----CQC----------------KPGVTGDKCDRCDVN 92
+P+ G N+ GR CQC + TG CD+C
Sbjct: 66 GPNSVCDPVSGECECPANTVGRTCEPCQCNNSTDKCLRSGECRDCQHNTTGFYCDKCVTG 125
Query: 93 HYDFGEAG-CK----SCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
Y A CK SC+CN GS + CD V GQC S + + GR + +V S
Sbjct: 126 TYGNATAQQCKGKQISCDCNVNGSSSSL--CDHVTGQC-SCKENVVGRDCSRCKVSSY-G 181
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
F PAG C + + GS +LQC+ G C C V G KC +C ++ +
Sbjct: 182 FGPAG-----CTECACNVH-----GSASLQCDDSGVCPCNLEVIGTKCTQCKTGYFGLPK 231
Query: 208 AGCK 211
CK
Sbjct: 232 MACK 235
>gi|198432295|ref|XP_002126784.1| PREDICTED: similar to Netrin-4 precursor (Beta-netrin)
(Hepar-derived netrin-like protein) [Ciona intestinalis]
Length = 677
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 18/124 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNC+ S RC FD EL+ R+G+ GG C+ CQ G C C+ Y+++ S +
Sbjct: 335 CNCHSHSQRCRFDSELWERSGNRSGGVCMGCQHKTRGRYCHLCKPGYFRRLEADLSDQDI 394
Query: 54 CTACNCNPIGSL----------NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 102
C C C+ G+ L C++ G+C+CKPGV G +CDRC ++ FG GC
Sbjct: 395 CRECLCDITGTYFHKPRTRRQQTLPCDTITGQCRCKPGVGGRRCDRCLHGYWGFGRHGCS 454
Query: 103 SCEC 106
C C
Sbjct: 455 ECLC 458
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 175 NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
L C++ G+C+CKPGV G +CDRC ++ FG GC C C
Sbjct: 417 TLPCDTITGQCRCKPGVGGRRCDRCLHGYWGFGRHGCSECLC 458
>gi|410928530|ref|XP_003977653.1| PREDICTED: laminin subunit alpha-3-like [Takifugu rubripes]
Length = 3337
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 106/262 (40%), Gaps = 72/262 (27%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
C C S+ CF+D E+ + R GG C +CQ + G NCE+C +Y+
Sbjct: 349 CQCFSHSSDCFYDPEVEKNRASLDTFGRYDGGGVCTNCQHNTAGVNCERCIQGFYRPFQV 408
Query: 49 --SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C C+ + + S GRC CKP +G CD C + +
Sbjct: 409 PPESPSGCIPCRCDERTTAGCEMGS-GRCVCKPQFSGHNCDVCADGYIYY---------- 457
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW---DLRRCKR 163
P C + + S K+ PAG + D R +R
Sbjct: 458 ---------PQC-----------------IRYPVFTTSTKS--PAGPIVECVCDYRGTER 489
Query: 164 DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
+ C++ GRC C+ GV G++CDRC H+ F C++C+C+ GS N
Sbjct: 490 EV------------CDTSGRCLCRRGVAGERCDRCQPGHHSF--PSCQACQCSTEGSYGN 535
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
C+ V GQC C V G QC
Sbjct: 536 V--CNPVSGQCLCLPGVVGQQC 555
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 103/250 (41%), Gaps = 58/250 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--------------QKSGDNFCTACNCNPIGSLNLQC 69
G C+ C+ G NC+ C D Y KS C C+ G+ C
Sbjct: 434 GRCV-CKPQFSGHNCDVCADGYIYYPQCIRYPVFTTSTKSPAGPIVECVCDYRGTEREVC 492
Query: 70 NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
++ GRC C+ GV G++CDRC H+ F C++C+C+ GS N C+ V GQC
Sbjct: 493 DTSGRCLCRRGVAGERCDRCQPGHHSF--PSCQACQCSTEGSYGNV--CNPVSGQC---- 544
Query: 130 LSSRGRVHTE-------LRVQ----SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
L G V + LR S + AG+ + D PL
Sbjct: 545 LCLPGVVGQQCDQCASGLRFPQCSGSIHGCNSAGSAVVD---------PL---------- 585
Query: 179 NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE 235
G C+C V G CDRC ++D GCK C+C+ G++ +C GQC
Sbjct: 586 --TGSCRCLENVEGTLCDRCKPLYWDLAVVNPEGCKECQCDLKGTLSGVGDCQQKSGQCR 643
Query: 236 CKDNVEGAQC 245
CK N G C
Sbjct: 644 CKPNACGRSC 653
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 103/237 (43%), Gaps = 43/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ G C++C+ ++ C AC C+ GS CN G+C C PGV
Sbjct: 496 GRCL-CRRGVAGERCDRCQPGHHSFPS---CQACQCSTEGSYGNVCNPVSGQCLCLPGVV 551
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CD+C + F + CN AGS D + G C + V L
Sbjct: 552 GQQCDQC-ASGLRFPQCSGSIHGCNSAGSAV----VDPLTGSCRCLE-----NVEGTLCD 601
Query: 143 QSRKNFDPAGNRIWDL--------RRCKRDTYPLGHGGSLNLQCN---SEGRCQCKPGVT 191
+ + + WDL + C+ D G+L+ + G+C+CKP
Sbjct: 602 RCKPLY-------WDLAVVNPEGCKECQCDL-----KGTLSGVGDCQQKSGQCRCKPNAC 649
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C ++ + GC+ C+C+ G+V + CD GQC C+DNV G QC
Sbjct: 650 GRSCNTCKDGYFQLQKKKYFGCQDCQCDVGGAVDVS--CDETSGQCRCRDNVVGRQC 704
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN-------- 107
CNC+ GS C+ G +C C+P V G +C +C +Y F C+ CEC
Sbjct: 1268 CNCHRSGSEGSSCDPAGGQCACRPHVIGRQCTKCASGYYGF--PYCRPCECGRRLCDEVT 1325
Query: 108 -----PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
P +VK P+CD + Q S + P L C
Sbjct: 1326 GKCICPPQTVK--PSCDVCQAQTFS--------------------YHP-------LLGCD 1356
Query: 163 R-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
+ P G + C+ G+C CKP + G +CDRC +Y F E C C CN G
Sbjct: 1357 GCECSPTGIDDATRPDCDRLTGQCNCKPRIGGRRCDRCAAGYYRFPE--CLPCNCNRDGV 1414
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ + DS G+C CK NV G++C
Sbjct: 1415 TPDVCHPDS--GRCLCKKNVAGSKC 1437
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 77/207 (37%), Gaps = 44/207 (21%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ G C KC YY G +C C C L G+C C P
Sbjct: 1284 GGQCA-CRPHVIGRQCTKCASGYY---GFPYCRPCECG----RRLCDEVTGKCICPPQTV 1335
Query: 83 GDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTEL 140
CD C + + GC CEC+P G T P+CD + GQC + + R+
Sbjct: 1336 KPSCDVCQAQTFSYHPLLGCDGCECSPTGIDDATRPDCDRLTGQC-----NCKPRI---- 1386
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGH---------GGSLNLQCNSEGRCQCKPGVT 191
G R D RC Y G + ++ GRC CK V
Sbjct: 1387 -----------GGRRCD--RCAAGYYRFPECLPCNCNRDGVTPDVCHPDSGRCLCKKNVA 1433
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCEC 215
G KCD C + F + GC SC C
Sbjct: 1434 GSKCDACKDGGFYFDPSNPHGCTSCFC 1460
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 23/135 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG + C G CL+C+ + G CE+C++ YY C C C
Sbjct: 1690 CECNGHAEEC---------EDKTGRCLNCRYNTAGDRCERCKEGYYGDGARGTCRVCPCP 1740
Query: 61 PIGSLN------LQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGEAG-CKSCECNPAGS 111
S N + +C C+ G TGD+C C ++ G C+ C+CN G+
Sbjct: 1741 FSVSTNSFAVGCREVFGAFQCICRDGYTGDRCQSCAPGYFGDPLAPGGRCQPCQCNGNGN 1800
Query: 112 VKNTPNCDSVKGQCE 126
NCD G C+
Sbjct: 1801 -----NCDPRTGVCK 1810
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 23/140 (16%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
G C+C V G CDRC ++D GCK C+C+ G++ +C GQC +
Sbjct: 587 GSCRCLENVEGTLCDRCKPLYWDLAVVNPEGCKECQCDLKGTLSGVGDCQQKSGQCR-CK 645
Query: 130 LSSRGRV-----HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGR 183
++ GR ++Q +K F + C+ D GG++++ C+ + G+
Sbjct: 646 PNACGRSCNTCKDGYFQLQKKKYFG--------CQDCQCDV-----GGAVDVSCDETSGQ 692
Query: 184 CQCKPGVTGDKCDRCDVNHY 203
C+C+ V G +C N+Y
Sbjct: 693 CRCRDNVVGRQCSEPAPNYY 712
>gi|403273628|ref|XP_003928608.1| PREDICTED: netrin-3 [Saimiri boliviensis boliviensis]
Length = 578
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 310 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRV 369
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 370 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 406
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 254 CKCNGHASRCLLDAQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATAREPH 305
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 306 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 365
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C++C+C+P G+ T C+ GQC
Sbjct: 366 DRRVCRACDCHPVGAAGKT--CNQTTGQCP 393
>gi|355745955|gb|EHH50580.1| hypothetical protein EGM_01434 [Macaca fascicularis]
Length = 1172
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ +GG C +C+ +G NCE+C+ +Y++ S
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQET 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ G+C CK V G++CD C A GC C+CN
Sbjct: 376 CIPCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNI 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGR----VHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
GS ++ P CD G+C + ++ S + +P C D
Sbjct: 436 LGSRRDVP-CDEESGRCLCLPNVVGPKCDQCAPYHWKLASGQGCEP----------CACD 484
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH-----YDFGEAGCKSCECNPA 218
+ SL+ QCN G+C C+ G G C + Y GC++C+C+
Sbjct: 485 PH-----NSLSPQCNQFTGQCPCREGFGGLTCSAAAIRQCPDRTYGDAATGCRACDCDFR 539
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD G+C C+ + G +C
Sbjct: 540 GT--EGPGCDKASGRCLCRAGLTGPRC 564
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 103/243 (42%), Gaps = 38/243 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN---------PIGSLNLQCNSE 72
CQ + GPNCE+C Y + + C C+CN P Q
Sbjct: 281 CQHNTAGPNCERCAPFYNNRPWRPAEGRDTHECQRCDCNGHSETCHFDPAVFAASQGAYG 340
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C C+ G C+RC ++++ G C CEC+P G+V P CD V GQC
Sbjct: 341 GVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCIPCECDPDGAVPGAP-CDPVTGQC 399
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
+ V E + F G + + C R D LG ++ C+ E GR
Sbjct: 400 -----VCKEHVQGERCDLCKPGF--TGLTYANPQGCHRCDCNILG--SRRDVPCDEESGR 450
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C P V G KCD+C H+ GC+ C C+P S+ +P C+ GQC C++ G
Sbjct: 451 CLCLPNVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSL--SPQCNQFTGQCPCREGFGG 508
Query: 243 AQC 245
C
Sbjct: 509 LTC 511
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 36/191 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C C+CN +GS ++ C+ E GRC C P
Sbjct: 397 GQCV-CKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDVPCDEESGRCLCLP 455
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C H+ GC+ C C+P S+ +P C+ GQC
Sbjct: 456 NVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSL--SPQCNQFTGQCPC----------- 502
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-----------SEGRCQCK 187
R+ F +R+C TY G C+ + GRC C+
Sbjct: 503 ------REGFGGLTCSAAAIRQCPDRTYGDAATGCRACDCDFRGTEGPGCDKASGRCLCR 556
Query: 188 PGVTGDKCDRC 198
G+TG +CD+C
Sbjct: 557 AGLTGPRCDQC 567
>gi|355558808|gb|EHH15588.1| hypothetical protein EGK_01700 [Macaca mulatta]
Length = 1172
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ +GG C +C+ +G NCE+C+ +Y++ S
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQET 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ G+C CK V G++CD C A GC C+CN
Sbjct: 376 CIPCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNI 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGR----VHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
GS ++ P CD G+C + ++ S + +P C D
Sbjct: 436 LGSRRDVP-CDEESGRCLCLPNVVGPKCDQCAPYHWKLASGQGCEP----------CACD 484
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH-----YDFGEAGCKSCECNPA 218
+ SL+ QCN G+C C+ G G C + Y GC++C+C+
Sbjct: 485 PH-----NSLSPQCNQFTGQCPCREGFGGLTCSAAAIRQCPDRTYGDAATGCRACDCDFR 539
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD G+C C+ + G +C
Sbjct: 540 GT--EGPGCDKASGRCLCRAGLTGPRC 564
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 103/243 (42%), Gaps = 38/243 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN---------PIGSLNLQCNSE 72
CQ + GPNCE+C Y + + C C+CN P Q
Sbjct: 281 CQHNTAGPNCERCAPFYNNRPWRPAEGRDTHECQRCDCNGHSETCHFDPAVFAASQGAYG 340
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C C+ G C+RC ++++ G C CEC+P G+V P CD V GQC
Sbjct: 341 GVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCIPCECDPDGAVPGAP-CDPVTGQC 399
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
+ V E + F G + + C R D LG ++ C+ E GR
Sbjct: 400 -----VCKEHVQGERCDLCKPGF--TGLTYANPQGCHRCDCNILG--SRRDVPCDEESGR 450
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C P V G KCD+C H+ GC+ C C+P S+ +P C+ GQC C++ G
Sbjct: 451 CLCLPNVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSL--SPQCNQFTGQCPCREGFGG 508
Query: 243 AQC 245
C
Sbjct: 509 LTC 511
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 36/191 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C C+CN +GS ++ C+ E GRC C P
Sbjct: 397 GQCV-CKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDVPCDEESGRCLCLP 455
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C H+ GC+ C C+P S+ +P C+ GQC
Sbjct: 456 NVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSL--SPQCNQFTGQCPC----------- 502
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-----------SEGRCQCK 187
R+ F +R+C TY G C+ + GRC C+
Sbjct: 503 ------REGFGGLTCSAAAIRQCPDRTYGDAATGCRACDCDFRGTEGPGCDKASGRCLCR 556
Query: 188 PGVTGDKCDRC 198
G+TG +CD+C
Sbjct: 557 AGLTGPRCDQC 567
>gi|345801976|ref|XP_537003.3| PREDICTED: netrin-3 [Canis lupus familiaris]
Length = 577
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 407
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 34/149 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DCQ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDTQ--------GHLICDCQHGTEGPDCGRCKPFYCDRPWQRATAREAH 306
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 366
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 367 DRRACRACDCHPVGAAGKT--CNQTTGQC 393
>gi|403275386|ref|XP_003929430.1| PREDICTED: netrin-1 [Saimiri boliviensis boliviensis]
Length = 682
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 419 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 478
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 479 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 537
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 538 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 573
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 363 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 415
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 416 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITH 475
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 476 RKACKACDCHPVGAAGKT--CNQTTGQC 501
>gi|300796659|ref|NP_001179495.1| netrin-1 precursor [Bos taurus]
gi|296476680|tpg|DAA18795.1| TPA: netrin 1-like [Bos taurus]
Length = 603
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 340 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLGKPITHRKA 399
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 400 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 458
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 459 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 494
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 284 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 336
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 337 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLGKPITH 396
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 397 RKACKACDCHPVGAAGKT--CNQTTGQC 422
>gi|118404128|ref|NP_001072385.1| netrin 1 precursor [Xenopus (Silurana) tropicalis]
gi|111306023|gb|AAI21569.1| netrin 1 [Xenopus (Silurana) tropicalis]
Length = 601
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CN S+RC F+ ELY +G GG CL+C+ + G +C C+ Y + +
Sbjct: 333 CECNLHSHRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKQGYKRDLSKPITSRKA 392
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC-----ECN 107
C C C+PIG++N CN + G+CQCK GVTG C+RC Y + C E
Sbjct: 393 CKPCQCHPIGAVNAMCNQTTGQCQCKTGVTGPTCNRCAPG-YQQSRSAHMPCVRIQEEMT 451
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
S + +C+S S RVH LR +K++
Sbjct: 452 TTASYPQEWKAGTNGTECQSYCKPSHSRVHMNLRKYCKKDY 492
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 35/150 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG ++RC KE G +CQ + GP C+ C+ YY + S +
Sbjct: 278 CKCNGHASRCTAGKE--------GLMCECQHNTIGPECDACKPFYYDRPWQRATPSNAHE 329
Query: 54 CTACNCNPIGSLNLQCNSE-----GR------CQCKPGVTGDKCDRC------DVNHYDF 96
C AC CN + S + N E GR C+ G C C D++
Sbjct: 330 CVACECN-LHSHRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKQGYKRDLSKPIT 388
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
CK C+C+P G+V C+ GQC+
Sbjct: 389 SRKACKPCQCHPIGAVNAM--CNQTTGQCQ 416
>gi|190338532|gb|AAI63717.1| Laminin, alpha 4 [Danio rerio]
Length = 1871
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 95/239 (39%), Gaps = 81/239 (33%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTA 56
C+CNG S+ E +N TG CL+C GD G NCE+C +Y GD C
Sbjct: 155 CDCNGNSDPNLIFNECHNVTGK---CLNCWGDTAGDNCERCAPGFY---GDAISAKDCQE 208
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT 115
C CN G+ + S G C CKPGVTG CDRC+ H FG GC+ CEC A
Sbjct: 209 CQCNKCGTASCDDRS-GVCHCKPGVTGQLCDRCEDGHSGFGTCMGCRRCECASA------ 261
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
+++ C +PL H
Sbjct: 262 ----ALRATC----------------------------------------HPLTHS---- 273
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
CQC+PG G C+RC +D+ +GC+ C+C NCD G+C
Sbjct: 274 --------CQCRPGAGGRYCERCLPGFWDYSPSGCRKCDCPEE-------NCDLHTGEC 317
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 114/276 (41%), Gaps = 70/276 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
CNC G ++ C G C+DC+ G CE+C D + S G C C
Sbjct: 49 CNCKGHADSC---------EDITGICIDCRDHTLGDFCEQCEDRFLPVSLPDGTFMCRPC 99
Query: 58 NCNPIG----SLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCEC 106
C P+ + C+ G RC C+ G G C+RC +Y + G + CK C+C
Sbjct: 100 AC-PLSLESNNFAAHCDKRGEFLRCVCQDGYAGHYCERCAPGYYGNPMELGNS-CKKCDC 157
Query: 107 NPAGSVKNTPN-CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
N N C +V G+C L+ G D AG+ + RC
Sbjct: 158 NGNSDPNLIFNECHNVTGKC----LNCWG--------------DTAGD---NCERCA--- 193
Query: 166 YPLGHGGSLNL------QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGE-AG 209
P +G +++ QCN G C CKPGVTG CDRC+ H FG G
Sbjct: 194 -PGFYGDAISAKDCQECQCNKCGTASCDDRSGVCHCKPGVTGQLCDRCEDGHSGFGTCMG 252
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ CEC A +++ T C + C+C+ G C
Sbjct: 253 CRRCECASA-ALRAT--CHPLTHSCQCRPGAGGRYC 285
>gi|449486448|ref|XP_004186136.1| PREDICTED: LOW QUALITY PROTEIN: laminin, alpha 5 [Taeniopygia
guttata]
Length = 2547
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 100/259 (38%), Gaps = 59/259 (22%)
Query: 1 CNCNGFSNRCFFDKEL---------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNCNG + C++D E+ ++ GG C+DCQ G NCE+C YY+
Sbjct: 355 CNCNGHAYDCYYDPEVDRHKASRSREDKFEGGGVCIDCQHHTTGINCERCIPGYYRSPDH 414
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C CNC + + GRC CKP TG+ C C + +F
Sbjct: 415 PIDSPYVCYRCNCESDFTDGTCEDLTGRCYCKPNFTGEHCQACAEGYLNF---------- 464
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P+C V +++ + + PAG I D Y
Sbjct: 465 ---------PHCYPVPAFSQNS---------------TGEQVLPAGQII------NCDCY 494
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G G+ + G C CKP G CD+C HY C+ C+C+ G T
Sbjct: 495 AGGTEGNACRKDPRVGMCVCKPNFQGTHCDQCAPGHYG---PSCQPCQCSGPGQYDGT-- 549
Query: 227 CDSVKGQCECKDNVEGAQC 245
CDS GQC C+ EG C
Sbjct: 550 CDSETGQCLCRTGFEGQSC 568
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ +G +C++C Y+ C C C+ +G+L C+S G C C+ G
Sbjct: 555 GQCL-CRTGFEGQSCDQCAPGYFNYP---LCQLCGCSAVGTLPGGCDSAGNCFCRAEFAG 610
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRV 142
+C++C H+ + C +C C+ G+V N NC S GQC + L
Sbjct: 611 PRCEQCSPGHHSYPH--CYACSCDSRGAVDN--NC-SPAGQCRCHGNFAGHTCNQCALGF 665
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVN 201
+ P +C R+ GSL+ C + G+C C+P VTG +CD C
Sbjct: 666 YGYPSCTPC--------QCSRE-------GSLHGTCEQDTGQCSCRPKVTGLRCDTCVPG 710
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F C+ CNPAG P+ G C C+ VEG C
Sbjct: 711 AYGFPH--CQVGSCNPAGLETADPSL--APGSCACRAYVEGPAC 750
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 112/273 (41%), Gaps = 62/273 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C+CNG S++C G CL+CQ + +G +CE+C+D Y C C
Sbjct: 2084 CHCNGHSDQCL---------PGSGICLNCQHNTEGDHCERCKDGYMGSPSAQEPLQCVGC 2134
Query: 58 NCN-PIGSLNLQC-----NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
C + S N S +C CKPG G C+RC +Y G C P
Sbjct: 2135 PCPLSVASNNFAVGCVHKGSNMQCLCKPGYAGPNCERCAPGYY--GNPLVIGSSCQPCDC 2192
Query: 112 VKNT-PN-----CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
NT PN CDS+ G C G +H AG R + C
Sbjct: 2193 SGNTDPNMLFSSCDSLTGACS-------GCMHHT-----------AGARC---QLCAPGY 2231
Query: 166 YPLGHGGSLNLQCN-----------SEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSC 213
Y QCN G+C CK GVTG CDRC+ +Y F G +GC+ C
Sbjct: 2232 YGDAVLAKNCTQCNCSPCGTDSCHPQTGQCFCKTGVTGQHCDRCEEGYYGFEGCSGCRRC 2291
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+C+ G+V ++ C GQC C V G++C
Sbjct: 2292 DCD-VGAVGSS--CHVQSGQCSCLPGVSGSRCH 2321
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G+C C+ + GP CE+C ++ C AC+C+ G+++ C+ G+C+C
Sbjct: 599 AGNCF-CRAEFAGPRCEQCSPGHHSYP---HCYACSCDSRGAVDNNCSPAGQCRCHGNFA 654
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C++C + Y G C C+C+ GS+ T C+ GQC S R +V T LR
Sbjct: 655 GHTCNQCALGFY--GYPSCTPCQCSREGSLHGT--CEQDTGQC-----SCRPKV-TGLRC 704
Query: 142 ---VQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
V F +PAG D + G C C+ V
Sbjct: 705 DTCVPGAYGFPHCQVGSCNPAGLETADPSL-------------------APGSCACRAYV 745
Query: 191 TGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
G CDRC +++ GC SC+C+ G+V C GQC CK V G C +
Sbjct: 746 EGPACDRCKPGYWNLTPENPYGCLSCKCDTKGTVSGITECRQGDGQCFCKATVCGQFCSA 805
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 98/233 (42%), Gaps = 43/233 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C G+ G C +C +Y G CT C C+ GSL+ C + G+C C+P VTG +CD
Sbjct: 649 CHGNFAGHTCNQCALGFY---GYPSCTPCQCSREGSLHGTCEQDTGQCSCRPKVTGLRCD 705
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
C Y F C+ CNPAG P+ G C R + E
Sbjct: 706 TCVPGAYGFPH--CQVGSCNPAGLETADPSL--APGSCAC-------RAYVE-------- 746
Query: 148 FDPAGNR----IWDLR--------RCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
PA +R W+L CK DT G + Q +G+C CK V G C
Sbjct: 747 -GPACDRCKPGYWNLTPENPYGCLSCKCDTKGTVSGITECRQ--GDGQCFCKATVCGQFC 803
Query: 196 DRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +++ A GC+ C C+ G++ P+C+ G C C+ + G C
Sbjct: 804 SACKDGYFNMENANYFGCQGCRCDVGGALG--PSCEERSGACRCRQSTRGPTC 854
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 84/203 (41%), Gaps = 40/203 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G C C G C+ C YY GD CT CNC+P G+ + + G+C CK
Sbjct: 2210 GACSGCMHHTAGARCQLCAPGYY---GDAVLAKNCTQCNCSPCGTDSCHPQT-GQCFCKT 2265
Query: 80 GVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
GVTG CDRC+ +Y F G +GC+ C+C+ G+V ++ C GQC S R H
Sbjct: 2266 GVTGQHCDRCEEGYYGFEGCSGCRRCDCD-VGAVGSS--CHVQSGQCSCLPGVSGSRCH- 2321
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS------EGRCQCKPGVTG 192
+C + G GG +C G C C G+TG
Sbjct: 2322 ---------------------QCAPGYWGFGQGGCTKCECRGGSCDPRSGECTCPNGLTG 2360
Query: 193 DKCDRCDVNHYDFGEAGCKSCEC 215
+CD C H G S +C
Sbjct: 2361 KQCDVCLHEHEILVANGPDSIKC 2383
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 98/238 (41%), Gaps = 40/238 (16%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP--------IGSLNLQCNS- 71
G CL C+ GPNCE+C YY G+ +C P L C+S
Sbjct: 2153 GSNMQCL-CKPGYAGPNCERCAPGYY---GNPLVIGSSCQPCDCSGNTDPNMLFSSCDSL 2208
Query: 72 EGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
G C C G +C C +Y C C C+P G T +C GQC
Sbjct: 2209 TGACSGCMHHTAGARCQLCAPGYYGDAVLAKNCTQCNCSPCG----TDSCHPQTGQC-FC 2263
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCK 187
+ G+ H + + F+ RRC D G++ C+ + G+C C
Sbjct: 2264 KTGVTGQ-HCDRCEEGYYGFEGCSG----CRRCDCDV------GAVGSSCHVQSGQCSCL 2312
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
PGV+G +C +C ++ FG+ GC CEC GS CD G+C C + + G QC
Sbjct: 2313 PGVSGSRCHQCAPGYWGFGQGGCTKCECR-GGS------CDPRSGECTCPNGLTGKQC 2363
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 14/130 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP C++C+ Y+ + +N C +C C+ G+++ +C +G+C CK V G
Sbjct: 741 CRAYVEGPACDRCKPGYWNLTPENPYGCLSCKCDTKGTVSGITECRQGDGQCFCKATVCG 800
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
C C +++ A GC+ C C+ G++ P+C+ G C Q S+RG T+
Sbjct: 801 QFCSACKDGYFNMENANYFGCQGCRCDVGGALG--PSCEERSGACRCRQ-STRGPTCTQ- 856
Query: 141 RVQSRKNFDP 150
+R ++ P
Sbjct: 857 --PARDHYFP 864
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 17/180 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ G C+ C Y G C +CNP G + + G C C+ V G CD
Sbjct: 695 CRPKVTGLRCDTCVPGAY---GFPHCQVGSCNPAGLETADPSLAPGSCACRAYVEGPACD 751
Query: 88 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
RC +++ GC SC+C+ G+V C GQC + + G+ + +
Sbjct: 752 RCKPGYWNLTPENPYGCLSCKCDTKGTVSGITECRQGDGQC-FCKATVCGQFCSACK--- 807
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
F+ + + C+ D GG+L C G C+C+ G C + +HY
Sbjct: 808 DGYFNMENANYFGCQGCRCDV-----GGALGPSCEERSGACRCRQSTRGPTCTQPARDHY 862
>gi|440895598|gb|ELR47748.1| Netrin-1, partial [Bos grunniens mutus]
Length = 549
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 286 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLGKPITHRKA 345
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 346 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 404
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 405 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 440
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 33/149 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------- 53
C CNG + RC D++ DC+ + GP C++C+ +Y +
Sbjct: 229 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREASL 281
Query: 54 -CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-- 99
TACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 282 PLTACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLGKPIT 341
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 342 HRKACKACDCHPVGAAGKT--CNQTTGQC 368
>gi|24584296|ref|NP_723870.1| wing blister, isoform B [Drosophila melanogaster]
gi|22946483|gb|AAN10875.1| wing blister, isoform B [Drosophila melanogaster]
Length = 3375
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C + G C+KCR ++ + C C C+P GS +CN G+C CK GV G C+
Sbjct: 1171 CLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIGVGGQHCN 1230
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGR-----VHTELR 141
C + F GC+ C C G V CD G+C + + RG V
Sbjct: 1231 ECTEGFFGFSTEGCQRCSACRSEGQV-----CDPHNGRCICPKFT-RGLGCGQCVPGTWG 1284
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
Q+R R C+ D H GS+ QC++ +G+CQC+ G +G KCD C +
Sbjct: 1285 WQARLG----------CRECECD-----HIGSIGQQCSTGDGQCQCREGYSGRKCDTCAI 1329
Query: 201 NHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
++ + E C+ C C+ GS + CDS GQC CK V G +C
Sbjct: 1330 GYFGYPE--CRRCGCDAEGSFTQADGSIACDS-NGQCPCKSLVVGLKC 1374
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 110/287 (38%), Gaps = 84/287 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG SN C G+C DC + G CE+C+ YY
Sbjct: 852 CPCNGHSNSCDL---------QSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTPNDCKRC 902
Query: 47 ----QKSGDNFCTACNCNPIGSLNLQCNSEGR-------CQCKPGVTGDKCDRCDVNHYD 95
+ +NF +C ++L E QC G TGD C CD ++
Sbjct: 903 ACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFG 962
Query: 96 FGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
SC+ C+ AG C+ G+C + + ++ G
Sbjct: 963 NPRQPGSSCQRCDCAGG-----PCNVTTGECITCRGNTEG-------------------- 997
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCN----------------SEGRCQCKPGVTGDKCDRC 198
W RCK LG+ G + C+ ++G+C CKP G KCD C
Sbjct: 998 -WHCERCK-----LGYWGDPAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDEC 1051
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
DV + + E C SC C+P GS+ CD GQC CK+ V GA+C
Sbjct: 1052 DVGYANV-ELRCPSCNCDPLGSLVQD-RCDPHTGQCHCKEGVMGAKC 1096
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 29 CQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGD 84
C+ G CE+C+ Y+ + + C CNC+P G C+ E GRC C+ GVTG
Sbjct: 1742 CKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRCYCREGVTGL 1801
Query: 85 KCDRCDVNHYDFGEAGCKSCE 105
KCD+C + + GCK C+
Sbjct: 1802 KCDKCQAERHHLVDNGCKICD 1822
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
H G C+ C G C +C + C C C+ IGS+ QC++ +G+CQC+ G
Sbjct: 1260 HNGRCI-CPKFTRGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREG 1318
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQC 125
+G KCD C + ++ + E C+ C C+ GS + CDS GQC
Sbjct: 1319 YSGRKCDTCAIGYFGYPE--CRRCGCDAEGSFTQADGSIACDS-NGQC 1363
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C+CNG S+ C D+E G C +C+G+ G +C +C + +Y + + C AC C
Sbjct: 1670 CHCNGRSSDC--DRE-------TGVCQNCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPC 1720
Query: 60 NPIGSLNLQ-----CNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAG 110
P + N + E C CKPG TG C+RC ++ + C+ C C+P G
Sbjct: 1721 -PETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDG 1779
Query: 111 SVKNTPNCDSVKGQC 125
T CD G+C
Sbjct: 1780 I--QTEGCDVETGRC 1792
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 70/196 (35%), Gaps = 71/196 (36%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGS 111
C C+C+ +GSL+ C+ G+C C VTG +CD+C H++ GC+ C C
Sbjct: 1147 CEECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRC----- 1201
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
DP G+R GH
Sbjct: 1202 -------------------------------------DPHGSR--------------GH- 1209
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDS 229
+CN G+C CK GV G C+ C + F GC+ C C G V CD
Sbjct: 1210 -----ECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQV-----CDP 1259
Query: 230 VKGQCECKDNVEGAQC 245
G+C C G C
Sbjct: 1260 HNGRCICPKFTRGLGC 1275
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C G + C +D L G C C + G CE C +Y++ C C
Sbjct: 452 CQCYGHAESCTYDPFL-----DKGICQSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPC 506
Query: 58 NCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
+CNP S C S+ G C C G G C+ C +Y CK CEC+ GS+ +T
Sbjct: 507 SCNPARSTG-GCQSDGGSCNCLEGFQGKNCEECAPGYYG---DDCKRCECDERGSLGSTG 562
Query: 117 NCDSV 121
+C V
Sbjct: 563 SCSGV 567
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
E C CKPG TG C+RC ++ + C+ C C+P G T CD G+C C
Sbjct: 1737 EVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGI--QTEGCDVETGRCYC 1794
Query: 237 KDNVEGAQC 245
++ V G +C
Sbjct: 1795 REGVTGLKC 1803
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 64/149 (42%), Gaps = 32/149 (21%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C +C G NCE+C YY GD+ C C C+ GSL + G CQCK V
Sbjct: 521 GGSC-NCLEGFQGKNCEECAPGYY---GDD-CKRCECDERGSLGSTGSCSGVCQCKLNVE 575
Query: 83 GDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C C ++D GC SC C+ V C SA+L +
Sbjct: 576 GSTCSECAPGYFDLSAENAEGCTSCWCS------------GVSQTCHSAKLQT------- 616
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
L ++ ++ +I D++R K + P+
Sbjct: 617 LAFETLNDW-----KITDIQRVKPISIPV 640
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C C G G C+ C +Y CK CEC+ GS+ +T +C V C+CK NVE
Sbjct: 522 GSCNCLEGFQGKNCEECAPGYYG---DDCKRCECDERGSLGSTGSCSGV---CQCKLNVE 575
Query: 242 GAQC 245
G+ C
Sbjct: 576 GSTC 579
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
GRC C+ GVTG KCD+C + + GCK C+
Sbjct: 1790 GRCYCREGVTGLKCDKCQAERHHLVDNGCKICD 1822
>gi|332848668|ref|XP_511846.3| PREDICTED: netrin-1 [Pan troglodytes]
Length = 725
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 495
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHHTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C +Y D G+ CK+C+C+P G+ T C+ GQC CKD
Sbjct: 371 CRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGKT--CNQTTGQCPCKDG 428
Query: 240 VEGAQC 245
V G C
Sbjct: 429 VTGITC 434
>gi|332634763|ref|NP_001193834.1| netrin-3 precursor [Bos taurus]
gi|296473584|tpg|DAA15699.1| TPA: netrin 3 [Bos taurus]
Length = 580
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 407
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 34/150 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDPQ--------GHLTCDCRHGTEGPDCSRCKPFYCDRPWQRATAREAH 306
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 366
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C++C+C+P G+ T C+ GQC
Sbjct: 367 DRRACRACDCHPVGAAGKT--CNQTTGQCP 394
Score = 36.6 bits (83), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C Y D G A C++C+C+P G+ T C+ GQC CKD
Sbjct: 341 CRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKT--CNQTTGQCPCKDG 398
Query: 240 VEGAQC 245
V G C
Sbjct: 399 VTGLTC 404
>gi|335284868|ref|XP_003354720.1| PREDICTED: netrin-3 [Sus scrofa]
Length = 580
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 407
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 34/149 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG +++C D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASKCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATAREAH 306
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 366
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 367 DRRACRACDCHPVGAAGKT--CNQTTGQC 393
>gi|170036789|ref|XP_001846244.1| laminin alpha-1, 2 chain [Culex quinquefasciatus]
gi|167879687|gb|EDS43070.1| laminin alpha-1, 2 chain [Culex quinquefasciatus]
Length = 2296
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 102/234 (43%), Gaps = 47/234 (20%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ +G C +C Y+ C C C+P GS++ +C++ G+C CKPGV G CD
Sbjct: 102 CKPFVEGRQCNRCVAGYWNLESGVGCIQCTCDPSGSVHQECDAFSGQCYCKPGVEGPSCD 161
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
RC +Y F GCK CE C V CD G+C
Sbjct: 162 RCQPGYYGFSSQGCKRCEQCASPSYV-----CDPDTGRCMC------------------- 197
Query: 147 NFDPAGNRIWDLRRCKRDTY--PLGHG---------GSLNLQCNSE-GRCQCKPGVTGDK 194
P + + R C +T+ G GS+ CN++ G+C CK G TG +
Sbjct: 198 ---PPNSHGHECRSCVANTWGNVFQRGCQNCECDIAGSIGQSCNAQTGQCNCKEGFTGRQ 254
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
C+ C +Y G C+ C C+ GS+ + +CD GQC CK V G QC
Sbjct: 255 CNECAAGYY--GYPNCQRCGCDERGSIPRPDGSFDCDE-HGQCLCKSMVFGRQC 305
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 93/204 (45%), Gaps = 38/204 (18%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGS 111
ACNC+ GSLN CN + G C CKP V G +C+RC +++ GC C C+P+GS
Sbjct: 78 LLACNCHVQGSLNRICNQQRGLCVCKPFVEGRQCNRCVAGYWNLESGVGCIQCTCDPSGS 137
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
V CD+ GQC + G RC+ Y
Sbjct: 138 VHQ--ECDAFSGQC----------------------YCKPGVEGPSCDRCQPGYYGFSSQ 173
Query: 172 G--------SLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSV 221
G S + C+ + GRC C P G +C C N + + + GC++CEC+ AGS+
Sbjct: 174 GCKRCEQCASPSYVCDPDTGRCMCPPNSHGHECRSCVANTWGNVFQRGCQNCECDIAGSI 233
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ C++ GQC CK+ G QC
Sbjct: 234 GQS--CNAQTGQCNCKEGFTGRQC 255
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDS 229
GS++ +C++ G+C CKPGV G CDRC +Y F GCK CE C V CD
Sbjct: 136 GSVHQECDAFSGQCYCKPGVEGPSCDRCQPGYYGFSSQGCKRCEQCASPSYV-----CDP 190
Query: 230 VKGQCECKDNVEGAQCRS 247
G+C C N G +CRS
Sbjct: 191 DTGRCMCPPNSHGHECRS 208
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ G CE+C YY + D C C+CN GSL+ +C ++ G+CQCKPG+ G +
Sbjct: 672 CKPGYAGKLCERCVKGYYGFPELEDGRCEYCDCNREGSLSDECETKSGQCQCKPGIMGKR 731
Query: 86 CDRCDVNHYDFGEAGCKSCE 105
CDRC+ + CK C+
Sbjct: 732 CDRCEQPKHIVQGYKCKPCD 751
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCEC 236
SE C CKPG G C+RC +Y F E C+ C+CN GS+ + C++ GQC+C
Sbjct: 666 SEVSCICKPGYAGKLCERCVKGYYGFPELEDGRCEYCDCNREGSLSD--ECETKSGQCQC 723
Query: 237 KDNVEGAQC 245
K + G +C
Sbjct: 724 KPGIMGKRC 732
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
GSL+ +C ++ G+CQCKPG+ G +CDRC+ + CK C+
Sbjct: 708 GSLSDECETKSGQCQCKPGIMGKRCDRCEQPKHIVQGYKCKPCD 751
>gi|301770389|ref|XP_002920595.1| PREDICTED: laminin subunit beta-2-like [Ailuropoda melanoleuca]
Length = 1797
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 79/265 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+G ++ C FD +Y +G+ GG C CQ D G +CE CR +Y+ +
Sbjct: 346 CECHGHAHSCHFDMAVYLASGNVSGGVCDGCQHDTAGRHCELCRPFFYRDPSKDLRDPAV 405
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C +C+C+P+GS + +C+ G+C+CK V G +C +C ++ AG
Sbjct: 406 CRSCDCDPMGSQDSGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGYFGLSASDPAG 465
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+C+ G+V T +CD G C
Sbjct: 466 CRRCQCDARGTVPGTTSCDPNSGTC----------------------------------F 491
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
CKR G CN +C PG G D GC+ C+C+ G+
Sbjct: 492 CKRLVTGRG--------CN-----RCLPGHWGLSHDLL----------GCRPCDCDVGGA 528
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ P CD GQC C+ ++ G +C
Sbjct: 529 MD--PQCDEATGQCRCRQHMVGRRC 551
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPG--- 80
G CL C +GP+C C+ ++ ++ C C+CN +G+ QC S RC C P
Sbjct: 1004 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCSCNLLGTDPQQCPSADRCNCDPSSGQ 1063
Query: 81 ------VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
V G CDRC N ++ GC+ C C+P S P C+ GQC +
Sbjct: 1064 CPCLPNVQGPSCDRCAPNFWNLTSGHGCQPCACHP--SRARGPTCNEFTGQCH-CRAGFG 1120
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
GR +E Q DP R C D G QC+ S G C C+PGV+G
Sbjct: 1121 GRTCSE--CQELHWGDPG----LQCRACDCDPR-----GIDTPQCHRSTGHCSCRPGVSG 1169
Query: 193 DKCDRC 198
+CD+C
Sbjct: 1170 VRCDQC 1175
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +CN G +C CKP V G +CD C Y FG GC++C+C+P G
Sbjct: 777 NGALPCQCDPQGSLSSECNPHGGQCLCKPAVAGRRCDLCAPGFYGFGPTGCQACQCSPEG 836
Query: 111 SVKNTPNCDSVKGQC 125
S+ C+ GQC
Sbjct: 837 SLSGL--CEGTSGQC 849
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 98/243 (40%), Gaps = 40/243 (16%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG CL C+ G C+ C +Y G C AC C+P GSL+ C + G+C C+ G
Sbjct: 797 HGGQCL-CKPAVAGRRCDLCAPGFY-GFGPTGCQACQCSPEGSLSGLCEGTSGQCPCRTG 854
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR----- 135
G +CD C + F C+ C CN + CD+ G C + + G
Sbjct: 855 AFGLRCDHCQRGQWGFPR--CQPCVCN-----GHADECDTHTGACLGCRDHTGGEHCERC 907
Query: 136 ---VHTELRVQSRKNFDP------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
H + R+ P G+R C RD Y + + C C
Sbjct: 908 IAGFHGDPRLPYGGQCRPCPCPEGPGSRRHFATSCHRDGY------------SQQIMCHC 955
Query: 187 KPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEG 242
K G TG +CD C ++ D G C+ CEC+ + CD GQC C + EG
Sbjct: 956 KAGYTGLRCDACAPGYFGDPSRPGGQCQPCECSGNIDPTDPDACDPRTGQCLRCLHHTEG 1015
Query: 243 AQC 245
C
Sbjct: 1016 PHC 1018
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 106/273 (38%), Gaps = 52/273 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 876 CVCNGHADEC---------DTHTGACLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPC 926
Query: 58 NCNPIGS-----LNLQCNSEG-----RCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P G C+ +G C CK G TG +CD C ++ D G C+ C
Sbjct: 927 PC-PEGPGSRRHFATSCHRDGYSQQIMCHCKAGYTGLRCDACAPGYFGDPSRPGGQCQPC 985
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCK 162
EC+ + CD GQC R HTE + F R + C
Sbjct: 986 ECSGNIDPTDPDACDPRTGQC------LRCLHHTEGPHCAHCKPGFHGQAAR----QSCH 1035
Query: 163 RDTYPLGHGGSLNLQC---------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKS 212
R + L G+ QC S G+C C P V G CDRC N ++ GC+
Sbjct: 1036 RCSCNL--LGTDPQQCPSADRCNCDPSSGQCPCLPNVQGPSCDRCAPNFWNLTSGHGCQP 1093
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S P C+ GQC C+ G C
Sbjct: 1094 CACHP--SRARGPTCNEFTGQCHCRAGFGGRTC 1124
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ G G C C H+ C++C+C+P G +TP C G C C+ V
Sbjct: 1111 GQCHCRAGFGGRTCSECQELHWGDPGLQCRACDCDPRG--IDTPQCHRSTGHCSCRPGVS 1168
Query: 242 GAQC 245
G +C
Sbjct: 1169 GVRC 1172
>gi|350578145|ref|XP_003480297.1| PREDICTED: laminin subunit alpha-2-like, partial [Sus scrofa]
Length = 254
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 83/184 (45%), Gaps = 46/184 (25%)
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
CKPG TG C+ C + FG+A C+ C CN GS + C + GQCE
Sbjct: 58 CKPGTTGRYCELCADGY--FGDAVDAKNCQPCHCNANGSFSDV--CHTRTGQCE------ 107
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNSE 181
+ VQ R+ CK +T+ L GS + C
Sbjct: 108 -----CKPNVQGRR-----------CDECKPETFGLQSARGCIPCNCNSFGSKSFDCEES 151
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PGVTG KCDRC +++F E GC +C+C+ G+ NCD GQC C N
Sbjct: 152 GQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCDPKTGQCICPPNTI 206
Query: 242 GAQC 245
G +C
Sbjct: 207 GEKC 210
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 16/126 (12%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS+ C + RTG +C+ + G C++C+ + C CNC
Sbjct: 89 CNANGSFSDVC------HTRTGQ----CECKPNVQGRRCDECKPETFGLQSARGCIPCNC 138
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+ NCD
Sbjct: 139 NSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCD 193
Query: 120 SVKGQC 125
GQC
Sbjct: 194 PKTGQC 199
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 17/97 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F +E G C CQ G C++C Y+ Q+ G CTAC+
Sbjct: 136 CNCNSFGSKSFDCEE-------SGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACD 184
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 94
C+ +G+ C+ + G+C C P G+KC +C N +
Sbjct: 185 CSHLGN---NCDPKTGQCICPPNTIGEKCSKCAPNTW 218
>gi|327264812|ref|XP_003217205.1| PREDICTED: netrin-1-like [Anolis carolinensis]
Length = 711
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+
Sbjct: 448 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKPITHRKA 507
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 508 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVVPP 566
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
T + C+S +S+G++ ++ +K++
Sbjct: 567 TTTASSTEEPSDCDSYCKASKGKLKINMKKYCKKDY 602
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ G DC+ + GP C++C+ +Y + N
Sbjct: 392 CKCNGHAARCLRDRD-------GLLACDCKHNTAGPECDRCKPFHYDRPWQRATAREANQ 444
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D +
Sbjct: 445 CLACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKPITH 504
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 505 RKACKACDCHPVGAAGKT--CNQTTGQC 530
>gi|354494916|ref|XP_003509580.1| PREDICTED: netrin-3 [Cricetulus griseus]
gi|344253649|gb|EGW09753.1| Netrin-3 [Cricetulus griseus]
Length = 580
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC F ++ C
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG---FQQSRSPVAPCVKTPVP 427
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNF 148
T V+ Q CES +RG L+ +K++
Sbjct: 428 GPTEESSPVEPQDCESHCRPARGSYRISLKKFCKKDY 464
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSG---DNF 53
C CNG ++RC D HG DCQ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDS-------HGHLICDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHA 307
Query: 54 CTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA--- 99
C AC+CN N++ S G C C+ G C C Y D G
Sbjct: 308 CLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSD 367
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 368 RRACRACDCHPVGAAGKT--CNQTTGQC 393
>gi|281338355|gb|EFB13939.1| hypothetical protein PANDA_009358 [Ailuropoda melanoleuca]
Length = 1805
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 79/265 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+G ++ C FD +Y +G+ GG C CQ D G +CE CR +Y+ +
Sbjct: 354 CECHGHAHSCHFDMAVYLASGNVSGGVCDGCQHDTAGRHCELCRPFFYRDPSKDLRDPAV 413
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C +C+C+P+GS + +C+ G+C+CK V G +C +C ++ AG
Sbjct: 414 CRSCDCDPMGSQDSGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGYFGLSASDPAG 473
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+C+ G+V T +CD G C
Sbjct: 474 CRRCQCDARGTVPGTTSCDPNSGTC----------------------------------F 499
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
CKR G CN +C PG G D GC+ C+C+ G+
Sbjct: 500 CKRLVTGRG--------CN-----RCLPGHWGLSHDLL----------GCRPCDCDVGGA 536
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ P CD GQC C+ ++ G +C
Sbjct: 537 MD--PQCDEATGQCRCRQHMVGRRC 559
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPG--- 80
G CL C +GP+C C+ ++ ++ C C+CN +G+ QC S RC C P
Sbjct: 1012 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCSCNLLGTDPQQCPSADRCNCDPSSGQ 1071
Query: 81 ------VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
V G CDRC N ++ GC+ C C+P S P C+ GQC +
Sbjct: 1072 CPCLPNVQGPSCDRCAPNFWNLTSGHGCQPCACHP--SRARGPTCNEFTGQCH-CRAGFG 1128
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
GR +E Q DP R C D G QC+ S G C C+PGV+G
Sbjct: 1129 GRTCSE--CQELHWGDPG----LQCRACDCDPR-----GIDTPQCHRSTGHCSCRPGVSG 1177
Query: 193 DKCDRC 198
+CD+C
Sbjct: 1178 VRCDQC 1183
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +CN G +C CKP V G +CD C Y FG GC++C+C+P G
Sbjct: 785 NGALPCQCDPQGSLSSECNPHGGQCLCKPAVAGRRCDLCAPGFYGFGPTGCQACQCSPEG 844
Query: 111 SVKNTPNCDSVKGQC 125
S+ C+ GQC
Sbjct: 845 SLSGL--CEGTSGQC 857
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 98/243 (40%), Gaps = 40/243 (16%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG CL C+ G C+ C +Y G C AC C+P GSL+ C + G+C C+ G
Sbjct: 805 HGGQCL-CKPAVAGRRCDLCAPGFY-GFGPTGCQACQCSPEGSLSGLCEGTSGQCPCRTG 862
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR----- 135
G +CD C + F C+ C CN + CD+ G C + + G
Sbjct: 863 AFGLRCDHCQRGQWGFPR--CQPCVCN-----GHADECDTHTGACLGCRDHTGGEHCERC 915
Query: 136 ---VHTELRVQSRKNFDP------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
H + R+ P G+R C RD Y + + C C
Sbjct: 916 IAGFHGDPRLPYGGQCRPCPCPEGPGSRRHFATSCHRDGY------------SQQIMCHC 963
Query: 187 KPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEG 242
K G TG +CD C ++ D G C+ CEC+ + CD GQC C + EG
Sbjct: 964 KAGYTGLRCDACAPGYFGDPSRPGGQCQPCECSGNIDPTDPDACDPRTGQCLRCLHHTEG 1023
Query: 243 AQC 245
C
Sbjct: 1024 PHC 1026
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 106/273 (38%), Gaps = 52/273 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 884 CVCNGHADEC---------DTHTGACLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPC 934
Query: 58 NCNPIGS-----LNLQCNSEG-----RCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P G C+ +G C CK G TG +CD C ++ D G C+ C
Sbjct: 935 PC-PEGPGSRRHFATSCHRDGYSQQIMCHCKAGYTGLRCDACAPGYFGDPSRPGGQCQPC 993
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCK 162
EC+ + CD GQC R HTE + F R + C
Sbjct: 994 ECSGNIDPTDPDACDPRTGQC------LRCLHHTEGPHCAHCKPGFHGQAAR----QSCH 1043
Query: 163 RDTYPLGHGGSLNLQC---------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKS 212
R + L G+ QC S G+C C P V G CDRC N ++ GC+
Sbjct: 1044 RCSCNL--LGTDPQQCPSADRCNCDPSSGQCPCLPNVQGPSCDRCAPNFWNLTSGHGCQP 1101
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S P C+ GQC C+ G C
Sbjct: 1102 CACHP--SRARGPTCNEFTGQCHCRAGFGGRTC 1132
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ G G C C H+ C++C+C+P G +TP C G C C+ V
Sbjct: 1119 GQCHCRAGFGGRTCSECQELHWGDPGLQCRACDCDPRG--IDTPQCHRSTGHCSCRPGVS 1176
Query: 242 GAQC 245
G +C
Sbjct: 1177 GVRC 1180
>gi|83415122|ref|NP_001032775.1| netrin-4 precursor [Danio rerio]
gi|62866617|gb|AAY17260.1| netrin 4 precursor [Danio rerio]
Length = 558
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 17/132 (12%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CNG + C FD+ ++ R+G HGG C DC + G +C+ C+ +Y+ + +
Sbjct: 281 CKCNGHAESCHFDESVWLRSGQQHGGVC-DCLHNTTGQHCQHCQSGFYRDPKKPSTAPDS 339
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
CT C CN +GS + ++ G C CKPGV G C++C + ++ E GCK C+C AG
Sbjct: 340 CTPCMCNHVGSSYCKPDN-GECVCKPGVAGRHCEQCMLGYWGLDEYGCKPCQC--AG--- 393
Query: 114 NTPNCDSVKGQC 125
+CD G C
Sbjct: 394 ---DCDPYTGDC 402
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G C CKPGV G C++C + ++ E GCK C+C AG +CD G C +
Sbjct: 358 GECVCKPGVAGRHCEQCMLGYWGLDEYGCKPCQC--AG------DCDPYTGDCMIR 405
>gi|195118467|ref|XP_002003758.1| GI21346 [Drosophila mojavensis]
gi|193914333|gb|EDW13200.1| GI21346 [Drosophila mojavensis]
Length = 1793
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 56/236 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG + C FD+ ++ +GH GG C +C + G +CE+C +Y+ S N
Sbjct: 354 CECNGHAVSCHFDEAMFVASGHVSGGFCDNCLHNTQGQHCEECMAFFYRDPAEPLSSPNV 413
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C C+C+PIGSL+ C+S G C CK V G +CDRC ++ G
Sbjct: 414 CRPCDCDPIGSLDEGICDSVNDPENGIEAGACHCKKNVKGRRCDRCKDGFWNLDPNNPEG 473
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C CN G+V N+ C+ G+C+ +L + G+ D +
Sbjct: 474 CEECTCNTLGTVNNS-GCNMHTGECQCKRLVT-GK---------------------DCNQ 510
Query: 161 CKRDTYPLGH------------GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
C+ +T+ L GGS + C+ G+C+C+ +TG C + N+Y
Sbjct: 511 CQPETFGLSESEDGCTLCNCDTGGSYDNYCDVLTGQCRCRSHMTGRTCSQPKQNYY 566
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 84/193 (43%), Gaps = 70/193 (36%)
Query: 55 TACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
+ CNCNP GSL+ C++ G CQCKP V G +CD+C Y FG GCKSC+CN GS
Sbjct: 792 SMCNCNPTGSLSKVCDANGGFCQCKPNVVGRQCDQCAPGTYGFGPEGCKSCDCNSIGSKD 851
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
N NCD + GQC C +TY
Sbjct: 852 N--NCDLLTGQCA----------------------------------CHPNTY------- 868
Query: 174 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
+CN QC+PG +++F C+ CECN SV CD + GQ
Sbjct: 869 -GRECN-----QCQPG------------YWNF--PACRVCECNGHASV-----CDPLTGQ 903
Query: 234 C-ECKDNVEGAQC 245
C C+D+ +G C
Sbjct: 904 CINCQDSTDGFNC 916
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 88/227 (38%), Gaps = 69/227 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---SEGRCQCKPG 80
G CL C D G +CE CRD Y+ + C C C+ +G+ + G+C C P
Sbjct: 1015 GACLKCLYDTTGEHCELCRDGYHGDALQQNCRPCECDFLGTNKTLAHCDRFTGQCPCLPN 1074
Query: 81 VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G C+ C VNH+ G GC+ C NCD++
Sbjct: 1075 VQGLLCNECAVNHWKIGSGEGCEPC------------NCDAI------------------ 1104
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
G++ QC+S G+C+CKPG G C++C
Sbjct: 1105 --------------------------------GAVQEQCHSFTGQCECKPGFGGRACNQC 1132
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ + C+ C+C+ GS CD GQC C + + G +C
Sbjct: 1133 QAHFWGNPNEKCQPCDCDQFGSADY--QCDRETGQCVCHEGIGGYKC 1177
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 109/235 (46%), Gaps = 21/235 (8%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
+GG C C+ + G C++C Y G C +C+CN IGS + C+ G+C C P
Sbjct: 808 ANGGFC-QCKPNVVGRQCDQCAPGTY-GFGPEGCKSCDCNSIGSKDNNCDLLTGQCACHP 865
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G +C++C +++F C+ CECN SV CD + GQC + Q S+ G + +
Sbjct: 866 NTYGRECNQCQPGYWNF--PACRVCECNGHASV-----CDPLTGQCINCQDSTDG-FNCD 917
Query: 140 LRVQSRKNFDPAGNRIWDLRRCK-RDTYPLGH----GGSLNLQCNSEGRCQCKPGVTGDK 194
+ DP R C+ DT G G SL+ + N+ C C+ G G +
Sbjct: 918 TCLDGYYG-DPLLGSEIGCRACRCPDTMASGMSHADGCSLDTR-NNNMLCNCQEGYAGAR 975
Query: 195 CDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
C+ C N++ E+G C C+C+ T NCD G C +C + G C
Sbjct: 976 CEICADNYFGNPESGGSCSKCDCSNNIDPYETGNCDRQTGACLKCLYDTTGEHCE 1030
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 97/264 (36%), Gaps = 90/264 (34%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------C 54
C CNG ++ C G C++CQ DG NC+ C D YY GD C
Sbjct: 888 CECNGHASVC---------DPLTGQCINCQDSTDGFNCDTCLDGYY---GDPLLGSEIGC 935
Query: 55 TACNCNPIGSLNLQ----CNSEGR-----CQCKPGVTGDKCDRCDVNHYDFGEAG--CKS 103
AC C + + C+ + R C C+ G G +C+ C N++ E+G C
Sbjct: 936 RACRCPDTMASGMSHADGCSLDTRNNNMLCNCQEGYAGARCEICADNYFGNPESGGSCSK 995
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+C+ N DP ++ C R
Sbjct: 996 CDCS--------------------------------------NNIDP-----YETGNCDR 1012
Query: 164 DTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRC-DVNHYDFGEAGCKSCECNPAGSV 221
T G C +C TG+ C+ C D H D + C+ CEC+ G+
Sbjct: 1013 QT----------------GACLKCLYDTTGEHCELCRDGYHGDALQQNCRPCECDFLGTN 1056
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
K +CD GQC C NV+G C
Sbjct: 1057 KTLAHCDRFTGQCPCLPNVQGLLC 1080
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G C CK V G +CDRC ++ GC+ C CN G+V N+ C+ G+C+CK
Sbjct: 443 GACHCKKNVKGRRCDRCKDGFWNLDPNNPEGCEECTCNTLGTVNNS-GCNMHTGECQCKR 501
Query: 239 NVEGAQC 245
V G C
Sbjct: 502 LVTGKDC 508
>gi|426380822|ref|XP_004057059.1| PREDICTED: netrin-3 [Gorilla gorilla gorilla]
Length = 580
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 407
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESH 306
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 366
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C++C+C+P G+ T C+ GQC
Sbjct: 367 DRRACRACDCHPVGAAGKT--CNQTTGQCP 394
>gi|5453810|ref|NP_006172.1| netrin-3 precursor [Homo sapiens]
gi|56404431|sp|O00634.1|NET3_HUMAN RecName: Full=Netrin-3; AltName: Full=Netrin-2-like protein; Flags:
Precursor
gi|2052393|gb|AAC51246.1| netrin-2 like protein [Homo sapiens]
gi|2052395|gb|AAC51247.1| netrin-2 like protein [Homo sapiens]
gi|119605910|gb|EAW85504.1| netrin 2-like (chicken) [Homo sapiens]
Length = 580
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 407
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESH 306
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 366
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C++C+C+P G+ T C+ GQC
Sbjct: 367 DRRACRACDCHPVGAAGKT--CNQTTGQCP 394
>gi|4883938|gb|AAD31714.1|AF135118_1 laminin alpha1,2 [Drosophila melanogaster]
Length = 3367
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C + G C+KCR ++ + C C C+P GS +CN G+C CK GV G C+
Sbjct: 1171 CLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIGVGGQHCN 1230
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGR-----VHTELR 141
C + F GC+ C C G V CD G+C + + RG V
Sbjct: 1231 ECTEGFFGFSTEGCQRCSACRSEGQV-----CDPHNGRCICPKFT-RGLGCGQCVPGTWG 1284
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
Q+R R C+ D H GS+ QC++ +G+CQC+ G +G KCD C +
Sbjct: 1285 WQARLG----------CRECECD-----HIGSIGQQCSTGDGQCQCREGYSGRKCDTCAI 1329
Query: 201 NHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
++ + E C+ C C+ GS + CDS GQC CK V G +C
Sbjct: 1330 GYFGYPE--CRRCGCDAEGSFTQADGSIACDS-NGQCPCKSLVVGLKC 1374
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 110/287 (38%), Gaps = 84/287 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG SN C G+C DC + G CE+C+ YY
Sbjct: 852 CPCNGHSNSCDL---------QSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTPNDCKRC 902
Query: 47 ----QKSGDNFCTACNCNPIGSLNLQCNSEGR-------CQCKPGVTGDKCDRCDVNHYD 95
+ +NF +C ++L E QC G TGD C CD ++
Sbjct: 903 ACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFG 962
Query: 96 FGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
SC+ C+ AG C+ G+C + + ++ G
Sbjct: 963 NPRQPGSSCQRCDCAGG-----PCNVTTGECITCRGNTEG-------------------- 997
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCN----------------SEGRCQCKPGVTGDKCDRC 198
W RCK LG+ G + C+ ++G+C CKP G KCD C
Sbjct: 998 -WHCERCK-----LGYWGDPAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDEC 1051
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
DV + + E C SC C+P GS+ CD GQC CK+ V GA+C
Sbjct: 1052 DVGYANV-ELRCPSCNCDPLGSLVQD-RCDPHTGQCHCKEGVMGAKC 1096
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 29 CQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGD 84
C+ G CE+C+ Y+ + + C CNC+P G C+ E GRC C+ GVTG
Sbjct: 1742 CKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRCYCREGVTGL 1801
Query: 85 KCDRCDVNHYDFGEAGCKSCE 105
KCD+C + + GCK C+
Sbjct: 1802 KCDKCQAERHHLVDNGCKICD 1822
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
H G C+ C G C +C + C C C+ IGS+ QC++ +G+CQC+ G
Sbjct: 1260 HNGRCI-CPKFTRGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREG 1318
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQC 125
+G KCD C + ++ + E C+ C C+ GS + CDS GQC
Sbjct: 1319 YSGRKCDTCAIGYFGYPE--CRRCGCDAEGSFTQADGSIACDS-NGQC 1363
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C+CNG S+ C D+E G C +C+G+ G +C +C + +Y + + C AC C
Sbjct: 1670 CHCNGRSSDC--DRE-------TGVCQNCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPC 1720
Query: 60 NPIGSLNLQ-----CNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAG 110
P + N + E C CKPG TG C+RC ++ + C+ C C+P G
Sbjct: 1721 -PETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDG 1779
Query: 111 SVKNTPNCDSVKGQC 125
T CD G+C
Sbjct: 1780 I--QTEGCDVETGRC 1792
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 70/196 (35%), Gaps = 71/196 (36%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGS 111
C C+C+ +GSL+ C+ G+C C VTG +CD+C H++ GC+ C C
Sbjct: 1147 CEECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRC----- 1201
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
DP G+R GH
Sbjct: 1202 -------------------------------------DPHGSR--------------GH- 1209
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDS 229
+CN G+C CK GV G C+ C + F GC+ C C G V CD
Sbjct: 1210 -----ECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQV-----CDP 1259
Query: 230 VKGQCECKDNVEGAQC 245
G+C C G C
Sbjct: 1260 HNGRCICPKFTRGLGC 1275
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C G + C +D L G C C + G CE C +Y++ C C
Sbjct: 452 CQCYGHAESCTYDPFL-----DKGICQSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPC 506
Query: 58 NCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
+CNP S C S+ G C C G G C+ C +Y CK CEC+ GS+ +T
Sbjct: 507 SCNPARSTG-GCQSDGGSCNCLEGFQGKNCEECAPGYYG---DDCKRCECDERGSLGSTG 562
Query: 117 NCDSV 121
+C V
Sbjct: 563 SCSGV 567
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
E C CKPG TG C+RC ++ + C+ C C+P G T CD G+C C
Sbjct: 1737 EVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGI--QTEGCDVETGRCYC 1794
Query: 237 KDNVEGAQC 245
++ V G +C
Sbjct: 1795 REGVTGLKC 1803
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 64/149 (42%), Gaps = 32/149 (21%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C +C G NCE+C YY GD+ C C C+ GSL + G CQCK V
Sbjct: 521 GGSC-NCLEGFQGKNCEECAPGYY---GDD-CKRCECDERGSLGSTGSCSGVCQCKLNVE 575
Query: 83 GDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C C ++D GC SC C+ V C SA+L +
Sbjct: 576 GSTCSECAPGYFDLSAENAEGCTSCWCS------------GVSQTCHSAKLQT------- 616
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
L ++ ++ +I D++R K + P+
Sbjct: 617 LAFETLNDW-----KITDIQRVKPISIPV 640
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C C G G C+ C +Y CK CEC+ GS+ +T +C V C+CK NVE
Sbjct: 522 GSCNCLEGFQGKNCEECAPGYYG---DDCKRCECDERGSLGSTGSCSGV---CQCKLNVE 575
Query: 242 GAQC 245
G+ C
Sbjct: 576 GSTC 579
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
GRC C+ GVTG KCD+C + + GCK C+
Sbjct: 1790 GRCYCREGVTGLKCDKCQAERHHLVDNGCKICD 1822
>gi|402907346|ref|XP_003916437.1| PREDICTED: netrin-3 [Papio anubis]
Length = 580
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 407
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESH 306
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 366
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C++C+C+P G+ T C+ GQC
Sbjct: 367 DRRACRACDCHPVGAAGKT--CNQTTGQCP 394
>gi|156397131|ref|XP_001637745.1| predicted protein [Nematostella vectensis]
gi|156224860|gb|EDO45682.1| predicted protein [Nematostella vectensis]
Length = 183
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 68 QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQC 125
+C G C+ C+ TG CD+C Y A CK+C+CN GS ++ CD V GQC
Sbjct: 15 KCLRSGECRDCQHNTTGFYCDKCVTGTYGNATAQQCKACDCNVNGS--SSSLCDHVTGQC 72
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQ 185
S + + GR + +V S F PAG C + + GS +LQC+ G C
Sbjct: 73 -SCKENVVGRDCSRCKVNSY-GFGPAG-----CTECACNVH-----GSASLQCDDSGVCP 120
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C V G KC +C ++ + CK+C+CN G+V T + GQC+CK V G C
Sbjct: 121 CNLEVIGTKCAQCKTGYFGLPKMTCKACDCNVDGTVNGTVCANDTIGQCQCKSGVTGRAC 180
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 82/212 (38%), Gaps = 49/212 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN +++C G C DCQ + G C+KC Y + C AC+CN
Sbjct: 7 CQCNNSTDKCL----------RSGECRDCQHNTTGFYCDKCVTGTYGNATAQQCKACDCN 56
Query: 61 PIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
GS + C+ G+C CK V G C RC VN Y FG AGC C CN GS
Sbjct: 57 VNGSSSSLCDHVTGQCSCKENVVGRDCSRCKVNSYGFGPAGCTECACNVHGSA------- 109
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
S Q G L V K +CK + L CN
Sbjct: 110 -------SLQCDDSGVCPCNLEVIGTK-----------CAQCKTGYFGLPKMTCKACDCN 151
Query: 180 SE-------------GRCQCKPGVTGDKCDRC 198
+ G+CQCK GVTG CD+C
Sbjct: 152 VDGTVNGTVCANDTIGQCQCKSGVTGRACDKC 183
>gi|326917515|ref|XP_003205044.1| PREDICTED: laminin subunit alpha-3-like [Meleagris gallopavo]
Length = 3356
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 111/260 (42%), Gaps = 64/260 (24%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D +E N GH GG C++CQ + G NCEKC YY+ G
Sbjct: 371 CNCHGHATDCYYDADVDQRRESLNIHGHYEGGGVCINCQHNTAGVNCEKCAKGYYRPYGV 430
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C +C C+ + + S GRC CK G+ C+ C Y F C
Sbjct: 431 PARAPDGCISCPCDLERAEGCEEGS-GRCFCKWNFKGENCEHCADGFYSF--PFCIHIPV 487
Query: 107 NPAGSVKNTPNC-DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
P S PN D++ G + +S G T+ V
Sbjct: 488 YPFTS----PNPRDAIAGDIIVCECNSVG---TQPEV----------------------- 517
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
C+ G+C C+ GV G +CD C H+ F C++C+C+P GS +
Sbjct: 518 ------------CDFLGKCLCRSGVVGHQCDSCQPGHHTF--PVCEACQCSPRGSQHSI- 562
Query: 226 NCDSVKGQCECKDNVEGAQC 245
C+ GQCEC+ ++ G QC
Sbjct: 563 -CEPTMGQCECQADITGRQC 581
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 61/248 (24%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ--------------------KSGDNFCTACNCNPIG 63
G C C+ + G NCE C D +Y +GD C CN +G
Sbjct: 456 GRCF-CKWNFKGENCEHCADGFYSFPFCIHIPVYPFTSPNPRDAIAGD--IIVCECNSVG 512
Query: 64 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 123
+ C+ G+C C+ GV G +CD C H+ F C++C+C+P GS + C+ G
Sbjct: 513 TQPEVCDFLGKCLCRSGVVGHQCDSCQPGHHTF--PVCEACQCSPRGSQHSI--CEPTMG 568
Query: 124 QCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-- 180
QCE A ++ R RC + + ++ +CN
Sbjct: 569 QCECQADITGR-----------------------QCDRCISAAHNFPYCEGIDSECNPSG 605
Query: 181 -----EGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKG 232
G CQC V G C +C +++ E GC +C C+ +G++ C G
Sbjct: 606 SIDSHSGYCQCLQHVEGPTCSKCKPLYWNLAEENPEGCTACLCDVSGTLSGVGECQQETG 665
Query: 233 QCECKDNV 240
+C CK NV
Sbjct: 666 RCYCKSNV 673
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 107/237 (45%), Gaps = 42/237 (17%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ G C+ C+ ++ C AC C+P GS + C + G+C+C+ +T
Sbjct: 522 GKCL-CRSGVVGHQCDSCQPGHHTFP---VCEACQCSPRGSQHSICEPTMGQCECQADIT 577
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC ++F ECNP+GS+ DS G C+ Q H E
Sbjct: 578 GRQCDRCISAAHNFPYCEGIDSECNPSGSI------DSHSGYCQCLQ-------HVE--- 621
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLG-------HGGSLNL--QCNSE-GRCQCKPGVTG 192
P ++ L + P G G+L+ +C E GRC CK V G
Sbjct: 622 ------GPTCSKCKPLYWNLAEENPEGCTACLCDVSGTLSGVGECQQETGRCYCKSNVCG 675
Query: 193 DKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
D C+ C+ +Y GCK C+C+ GS+ + C G C+C+++V G C+
Sbjct: 676 DFCNTCEAGYYALENKNYFGCKGCQCDVGGSISSA--CAEPSGACQCREHVVGKACQ 730
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 104/267 (38%), Gaps = 70/267 (26%)
Query: 6 FSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP 61
+S+R DK T GG+ +R C+ + D CNC+
Sbjct: 1234 YSHRILDKKTMDKSFDFITQCGGNSFHIDPERSSAFCKDSVRSLVAFYNDG-AVPCNCHS 1292
Query: 62 IGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN------------- 107
GS++ C+ G +C C+P V G +C RC +Y F CK C C
Sbjct: 1293 EGSMSPTCSPLGGQCICRPNVIGRQCSRCQTGYYGF--PFCKLCNCGQRLCDDLTGKCIC 1350
Query: 108 PAGSVKNTPNCDSVKGQ---------CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
P +VK P C+ + CES S RG V+ R + KN
Sbjct: 1351 PPRTVK--PKCEVCEKHYFGYHPLAGCESCNCSERGIVNAA-RPECEKN----------- 1396
Query: 159 RRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
+G+C+CKPG+ G +CD+C Y F C C CN
Sbjct: 1397 ----------------------KGQCKCKPGIRGRQCDQCVPGTYGF--PNCIPCNCNRD 1432
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ + CD G C CK+NVEGA+C
Sbjct: 1433 GTEPDV--CDPRTGVCLCKENVEGAEC 1457
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNL--QCNSE-GRCQ 76
H G+C C +GP C KC+ Y+ + +N CTAC C+ G+L+ +C E GRC
Sbjct: 610 HSGYC-QCLQHVEGPTCSKCKPLYWNLAEENPEGCTACLCDVSGTLSGVGECQQETGRCY 668
Query: 77 CKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
CK V GD C+ C+ +Y GCK C+C+ GS+ + C G C+
Sbjct: 669 CKSNVCGDFCNTCEAGYYALENKNYFGCKGCQCDVGGSISSA--CAEPSGACQ 719
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G CE C+D Y+ + C C C
Sbjct: 1711 CNCNGNSNRCH---------DGTGKCINCQYNTAGEKCELCKDGYFGDATQGSCRICPCP 1761
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
C + G +C CK G TG +C+RC ++ +G C+ C CN G +
Sbjct: 1762 YTNRFATGCVANGEEIQCLCKEGYTGVRCERCAPGYFGNPQKYG-GYCQKCNCNNNGQLA 1820
Query: 114 NTPNCDSVKGQC 125
+CD + G+C
Sbjct: 1821 ---SCDYLTGEC 1829
>gi|281342135|gb|EFB17719.1| hypothetical protein PANDA_016247 [Ailuropoda melanoleuca]
Length = 494
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 294 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 353
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 354 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 390
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 34/149 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DCQ +GP+C +C+ Y +Q++ +
Sbjct: 238 CKCNGHASRCLLDTQ--------GHLICDCQHGTEGPDCGRCKPFYCDRPWQRATAREAH 289
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 290 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 349
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 350 DRRACRACDCHPVGAAGKT--CNQTTGQC 376
>gi|345782840|ref|XP_540379.3| PREDICTED: laminin subunit beta-4 [Canis lupus familiaris]
Length = 1747
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 72/145 (49%), Gaps = 21/145 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CN S+RC FD Y +G GG C C+ + +G +C++CR +Y+ S
Sbjct: 332 CRCNSHSDRCHFDMTAYLSSGGRSGGVCEACRHNTEGQHCDRCRPLFYRDPLKAMSDPYA 391
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C C+P G+L+ C S G+C CK V G KCD+C NH+ G
Sbjct: 392 CIPCECDPDGTLSGGMCVSHSDPALGAVAGQCLCKENVEGAKCDQCKPNHHTLSATDPMG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQC 125
C+ C C+P+GS P CD GQC
Sbjct: 452 CQPCNCHPSGSAP-LPACDVDTGQC 475
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 123/294 (41%), Gaps = 71/294 (24%)
Query: 1 CNCNGFSNRCFFDKE----LYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C +E +++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECDPVQEARGDVFSPPGMVHGRCV-CQHNTDGPNCERCKD-FFQDAPWRPGA 322
Query: 51 ---DNFCTACNCNP---------IGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY-DF 96
D+ C AC CN L+ S G C+ C+ G CDRC Y D
Sbjct: 323 GPQDSTCRACRCNSHSDRCHFDMTAYLSSGGRSGGVCEACRHNTEGQHCDRCRPLFYRDP 382
Query: 97 GEA-----GCKSCECNPAGSVK-------NTPNCDSVKGQC------ESAQLSSRGRVHT 138
+A C CEC+P G++ + P +V GQC E A+ H
Sbjct: 383 LKAMSDPYACIPCECDPDGTLSGGMCVSHSDPALGAVAGQCLCKENVEGAKCDQCKPNHH 442
Query: 139 ELRVQSRK-----NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
L N P+G+ L C DT G+C C+P TG
Sbjct: 443 TLSATDPMGCQPCNCHPSGSA--PLPACDVDT----------------GQCLCQPFATGP 484
Query: 194 KCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+ C V H+ + GC C+C+ G+ N C GQCEC+ ++ G C
Sbjct: 485 RCEECAVGHWRMEDHLHGCSPCDCDIGGAYSNV--CSPKDGQCECRPHITGRSC 536
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 111/266 (41%), Gaps = 39/266 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CNGF+ C D E G C +C G G NCE+C D YY + C C C
Sbjct: 863 CLCNGFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPAAGKSCRPCPC 913
Query: 60 NPIGS---------LNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
+ S +S+ C C G TG +C C Y A C+ C CN
Sbjct: 914 PDVPSSSQYFAHSCYQHPWSSDVICNCLQGYTGKQCGECSAGFYGNPRVSGAPCQPCVCN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
+ + +C + G+C +++G + +F A N+ RRC +P
Sbjct: 974 NNTDMTDPESCSPLTGECLKCLHNTQG---PNCQFCKPGHFGSALNQT--CRRC--SCHP 1026
Query: 168 LGHG------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAG 219
G G C+ + G C C P VTG CDRC +++ GC+ C+C+P
Sbjct: 1027 PGVNPAECPPGLETCLCDPDTGMCPCLPNVTGRTCDRCADGYWNLVPGRGCQPCDCDPRT 1086
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
S + +CD + GQC CK +G C
Sbjct: 1087 S--HGGHCDQLTGQCRCKLGYDGKHC 1110
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 88/233 (37%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + GPNC+ C+ ++ + + C C+C+P G +C G
Sbjct: 989 GECLKCLHNTQGPNCQFCKPGHFGSALNQTCRRCSCHPPGVNPAECPPGLETCLCDPDTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+ C+C+P S + +CD + GQC
Sbjct: 1049 MCPCLPNVTGRTCDRCADGYWNLVPGRGCQPCDCDPRTS--HGGHCDQLTGQC------- 1099
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
RCK LG+ G
Sbjct: 1100 ---------------------------RCK-----LGYDGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C N+Y C C+C+ G+ K P CD G C C++ V G +C
Sbjct: 1109 -HCSGCKENYYGDPLEQCIPCDCSGEGAQK--PTCDQDTGMCRCREGVGGPRC 1158
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 19 RTGHGGHCLDCQGD------RDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN 70
RT HGGHC G DG +C C++NYY GD C C+C+ G+ C+
Sbjct: 1085 RTSHGGHCDQLTGQCRCKLGYDGKHCSGCKENYY---GDPLEQCIPCDCSGEGAQKPTCD 1141
Query: 71 SE-GRCQCKPGVTGDKCDRCDVNH 93
+ G C+C+ GV G +CDRC H
Sbjct: 1142 QDTGMCRCREGVGGPRCDRCARGH 1165
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N AC C+P GS+ L C+ G +CQCKP V G CDRC Y G GC C C+P G
Sbjct: 764 NGAIACKCHPQGSVGLSCSRLGGQCQCKPHVAGRCCDRCSTGSYGLGHHGCHPCHCHPQG 823
Query: 111 SVKNTPNCDSVKGQC 125
S T CD + GQC
Sbjct: 824 S--KTTVCDQITGQC 836
>gi|355709873|gb|EHH31337.1| hypothetical protein EGK_12388, partial [Macaca mulatta]
Length = 387
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 207 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 266
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 267 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 303
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 34/149 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 151 CKCNGHASRCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESH 202
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 203 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 262
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 263 DRRACRACDCHPVGAAGKT--CNQTTGQC 289
>gi|281352353|gb|EFB27937.1| hypothetical protein PANDA_011037 [Ailuropoda melanoleuca]
Length = 1161
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ +GG C +C+ +G NCE+C+ +Y++ S
Sbjct: 305 CDCNGHSESCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQET 364
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ + C+ G+C CK V G++CD C A GC C+C+
Sbjct: 365 CIPCECDPDGAVPGVPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCSL 424
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGR----VHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
GS ++ P C+ GQC + ++ S + +P C D
Sbjct: 425 LGSRRDMP-CNEESGQCLCLPHVVGPKCDQCAPYHWKLASGRGCEP----------CACD 473
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH---YDFGEAG--CKSCECNPA 218
+ SL QCN G+C C+ G +G C + +G+AG C++C+C+
Sbjct: 474 PH-----NSLGPQCNQFTGQCPCREGFSGLTCSAAAIRQCPDRTYGDAGTTCRACDCDFR 528
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD G+C C+ + G +C
Sbjct: 529 GT--EGPGCDKASGRCLCRPGLTGPRC 553
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 104/243 (42%), Gaps = 38/243 (15%)
Query: 29 CQGDRDGPNCEKC---RDNYYQKSGDNF----CTACNCN---------PIGSLNLQCNSE 72
CQ + GPNCE+C N + D+ C C+CN P Q +
Sbjct: 270 CQHNTAGPNCERCAPFHSNRPWRPADDQDPHECQRCDCNGHSESCHFDPAVFAASQGTNG 329
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C C+ G C+RC ++++ G C CEC+P G+V P CD V GQC
Sbjct: 330 GVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCIPCECDPDGAVPGVP-CDPVTGQC 388
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
+ V E + F G + + C R D L G ++ CN E G+
Sbjct: 389 -----VCKEHVQGERCDLCKPGF--TGLTYANPQGCHRCDCSLL--GSRRDMPCNEESGQ 439
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C P V G KCD+C H+ GC+ C C+P S+ P C+ GQC C++ G
Sbjct: 440 CLCLPHVVGPKCDQCAPYHWKLASGRGCEPCACDPHNSLG--PQCNQFTGQCPCREGFSG 497
Query: 243 AQC 245
C
Sbjct: 498 LTC 500
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 96
+C D Y +G C AC+C+ G+ C+ + GRC C+PG+TG +CD+C + D
Sbjct: 507 QCPDRTYGDAGTT-CRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQCQRGYCDL 563
>gi|397469240|ref|XP_003806269.1| PREDICTED: netrin-3 [Pan paniscus]
Length = 542
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDHRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 407
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESH 306
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 366
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C++C+C+P G+ T C+ GQC
Sbjct: 367 DHRACRACDCHPVGAAGKT--CNQTTGQCP 394
>gi|332845056|ref|XP_003314975.1| PREDICTED: LOW QUALITY PROTEIN: netrin-3, partial [Pan troglodytes]
Length = 537
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 268 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 327
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 328 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 364
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 212 CKCNGHASRCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESH 263
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 264 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 323
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C++C+C+P G+ T C+ GQC
Sbjct: 324 DRRACRACDCHPVGAAGKT--CNQTTGQCP 351
>gi|198466988|ref|XP_001354219.2| GA10179 [Drosophila pseudoobscura pseudoobscura]
gi|198149455|gb|EAL31272.2| GA10179 [Drosophila pseudoobscura pseudoobscura]
Length = 3708
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 97/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ GS + CN++G+C C+P G +CD
Sbjct: 606 NCLNNFAGKQCTLCSAGYYSYPD---CLPCHCDSHGSQGVTCNADGQCLCQPNFDGRQCD 662
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C + Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 663 SCKESFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVSGRICDECK----- 715
Query: 147 NFDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G L+ + G+C CKP G +C C
Sbjct: 716 ------PLYWNLNISNPDGCENCDCWTDGTISGLDTCASKSGQCPCKPHTQGRRCKECRD 769
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D + GCK C+C+ GS + CD GQC+C V G C
Sbjct: 770 GTFDLDSSSLFGCKDCQCDVGGSWASV--CDKTSGQCKCHPRVTGRAC 815
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 117/270 (43%), Gaps = 56/270 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G S C +D+++ NR G GG C +CQ + G NC KC+ YY+ G
Sbjct: 333 CNCHGHSTECKYDEDV-NRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKG 391
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
++ C+ C C+ S C E G C+C+ CD C +Y G C+ C
Sbjct: 392 KHWNDTDVCSPCQCDFFYSTG-HCEEETGNCECRAAFQPPNCDSCAYGYY--GYPNCREC 448
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN G+ N +C++ GQ + + NF AG+ ++C
Sbjct: 449 ECNLNGT--NGYHCEAESGQ----------------QCPCKINF--AGSY---CKQCAEG 485
Query: 165 TYPL--------GHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
Y GS+ CN + G C+C GD C+RC +Y++ C C+C
Sbjct: 486 YYGFPECKACECNQIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYYNY--PACSYCDC 543
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G+ C+ GQC C++ G +C
Sbjct: 544 DNQGTESEI--CNKQSGQCICREGFGGPRC 571
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 89/207 (42%), Gaps = 47/207 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+L +C+ G+C C
Sbjct: 1938 GECLRCLNNTFGAACNLCAPGFY---GDAVKLKNCQSCDCDDLGTL--ECDPFVGKCTCH 1992
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G++CDRC +HY F GC++C+C G+ N+ CD+ G C + + GR
Sbjct: 1993 ENVIGERCDRCKADHYGFESGLGCRACDC---GAASNSTQCDAHTGHC-ACKPGVTGR-- 2046
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCN-SEGRCQC 186
RC D + G S CN + G+CQC
Sbjct: 2047 -------------------QCDRCAVDHWKYQKEGCTPCNCNQGYSRGFGCNPNTGKCQC 2087
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PGV GD+CD C + GC+ C
Sbjct: 2088 LPGVIGDRCDACPNRWVLIKDEGCQEC 2114
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 104/236 (44%), Gaps = 37/236 (15%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
G C+ C+ GP C++C +Y C CNC+ GS + C++ G+C C
Sbjct: 556 QSGQCI-CREGFGGPRCDQCLPGFYNYPD---CKPCNCSSTGSSAITCDNTGKCNCLNNF 611
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +C C +Y + + C C C+ GS T N D GQC Q + GR +
Sbjct: 612 AGKQCTLCSAGYYSYPD--CLPCHCDSHGSQGVTCNAD---GQC-LCQPNFDGRQCDSCK 665
Query: 142 VQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+S NF DPAG I C + P+G C+CK V+G
Sbjct: 666 -ESFYNFPSCEDCNCDPAG-VIDKFAGC--GSVPVGE------------LCKCKERVSGR 709
Query: 194 KCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CD C +++ + GC++C+C G++ C S GQC CK + +G +C+
Sbjct: 710 ICDECKPLYWNLNISNPDGCENCDCWTDGTISGLDTCASKSGQCPCKPHTQGRRCK 765
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 109/254 (42%), Gaps = 62/254 (24%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSEGR 74
+ +G+ HC +C+ GP CE C + +Y + GD C C+C S N+ +G
Sbjct: 1879 SESGNEIHC-ECRPGYTGPRCESCANGFYGNPENVGD-VCKPCDC----SGNINPEDQGS 1932
Query: 75 CQCKPG--------VTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVK 122
C + G G C+ C Y G+A C+SC+C+ G+++ CD
Sbjct: 1933 CDTRTGECLRCLNNTFGAACNLCAPGFY--GDAVKLKNCQSCDCDDLGTLE----CDPFV 1986
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------G 172
G+C + + G R RCK D Y G
Sbjct: 1987 GKCTCHE-------------------NVIGERC---DRCKADHYGFESGLGCRACDCGAA 2024
Query: 173 SLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S + QC++ G C CKPGVTG +CDRC V+H+ + + GC C CN S C+
Sbjct: 2025 SNSTQCDAHTGHCACKPGVTGRQCDRCAVDHWKYQKEGCTPCNCNQGYS--RGFGCNPNT 2082
Query: 232 GQCECKDNVEGAQC 245
G+C+C V G +C
Sbjct: 2083 GKCQCLPGVIGDRC 2096
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 95/220 (43%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C++C + YY G C AC CN IGS+ CN + G C+C GD C+
Sbjct: 470 CKINFAGSYCKQCAEGYY---GFPECKACECNQIGSITNDCNVTTGECKCLTNFGGDNCE 526
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y++ C C+C+ G+ C+ GQC + R L
Sbjct: 527 RCKHGYYNY--PACSYCDCDNQGTESEI--CNKQSGQCICREGFGGPRCDQCL------- 575
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P D + C GS + C++ G+C C G +C C +Y + +
Sbjct: 576 --PGFYNYPDCKPCN-----CSSTGSSAITCDNTGKCNCLNNFAGKQCTLCSAGYYSYPD 628
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C C+ GS T N D GQC C+ N +G QC S
Sbjct: 629 --CLPCHCDSHGSQGVTCNAD---GQCLCQPNFDGRQCDS 663
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 110/282 (39%), Gaps = 95/282 (33%)
Query: 22 HGGHCLD-------------------CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNC 59
+GG+C+ CQ G +CE C YY + + C C C
Sbjct: 1804 YGGYCIPCECNGHSETCDCATGICTGCQHGTQGEHCEDCVSGYYGNATNGTPIDCMICAC 1863
Query: 60 N-PIGSLNL-------QCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECN 107
P S N + +E C+C+PG TG +C+ C Y + G+ CK C+C+
Sbjct: 1864 PLPFDSNNFATSCEISESGNEIHCECRPGYTGPRCESCANGFYGNPENVGDV-CKPCDCS 1922
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY- 166
+ ++ +CD+ G+C RC +T+
Sbjct: 1923 GNINPEDQGSCDTRTGEC---------------------------------LRCLNNTFG 1949
Query: 167 -------PLGHGGSLNLQ-CNS--------------EGRCQCKPGVTGDKCDRCDVNHYD 204
P +G ++ L+ C S G+C C V G++CDRC +HY
Sbjct: 1950 AACNLCAPGFYGDAVKLKNCQSCDCDDLGTLECDPFVGKCTCHENVIGERCDRCKADHYG 2009
Query: 205 FGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F GC++C+C G+ N+ CD+ G C CK V G QC
Sbjct: 2010 FESGLGCRACDC---GAASNSTQCDAHTGHCACKPGVTGRQC 2048
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C P V GD C++C N Y F + GC+ C CN G CD G CEC+D
Sbjct: 1432 TTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECNCNYLGIANGNTQCDMFNGTCECRD 1491
Query: 239 NVEGAQC 245
N+EG C
Sbjct: 1492 NIEGRAC 1498
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL CQ + DG C+ C++++Y NF C CNC+P G ++ C S C+
Sbjct: 648 GQCL-CQPNFDGRQCDSCKESFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 701
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK V+G CD C +++ + GC++C+C G++ C S GQC + ++
Sbjct: 702 CKERVSGRICDECKPLYWNLNISNPDGCENCDCWTDGTISGLDTCASKSGQC-PCKPHTQ 760
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
GR E R FD + ++ + C+ D GGS C+ + G+C+C P VTG
Sbjct: 761 GRRCKECR---DGTFDLDSSSLFGCKDCQCDV-----GGSWASVCDKTSGQCKCHPRVTG 812
Query: 193 DKCDRCDVNHY 203
C + HY
Sbjct: 813 RACTQPLTTHY 823
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 90/226 (39%), Gaps = 55/226 (24%)
Query: 39 EKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
E C+ + + D + ACNC+ GS + +C G +CQCKP V +C C +Y
Sbjct: 1355 EFCKKAVFSVTADYNSGALACNCDYAGSTSFECRPFGGQCQCKPNVIERQCGTCRSRYYG 1414
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
F + CK CEC P ++ C+ G+C N I
Sbjct: 1415 FPD--CKPCEC-PTSAM-----CEPTTGECMCPP-----------------------NVI 1443
Query: 156 WDL-RRCKRDTY--------------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCD 199
DL +C +TY LG N QC+ G C+C+ + G CD C
Sbjct: 1444 GDLCEKCAPNTYGFHQVIGCEECNCNYLGIANG-NTQCDMFNGTCECRDNIEGRACDVCA 1502
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+Y F C C C+ G+ CD + G C CK NV G C
Sbjct: 1503 HGYYQFPR--CDQCSCHTPGTELEV--CDKIDGSCFCKKNVVGRDC 1544
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNY--YQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H GHC C+ G C++C ++ YQK G CT CNCN S CN + G+CQC
Sbjct: 2032 AHTGHCA-CKPGVTGRQCDRCAVDHWKYQKEG---CTPCNCNQGYSRGFGCNPNTGKCQC 2087
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSC 104
PGV GD+CD C + GC+ C
Sbjct: 2088 LPGVIGDRCDACPNRWVLIKDEGCQEC 2114
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + C CR YY G C C C P ++ C + G C C P V
Sbjct: 1391 GGQC-QCKPNVIERQCGTCRSRYY---GFPDCKPCEC-PTSAM---CEPTTGECMCPPNV 1442
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE 126
GD C++C N Y F + GC+ C CN G CD G CE
Sbjct: 1443 IGDLCEKCAPNTYGFHQVIGCEECNCNYLGIANGNTQCDMFNGTCE 1488
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 41 CRDNYYQKS-----GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY- 94
R NY++++ D + + + + G+ Q + RC C PG G C+ C +Y
Sbjct: 1739 IRANYWEQTLVTHISDVYLSLADEDADGTAEYQFLAVERCSCPPGYVGHSCEDCAPGYYR 1798
Query: 95 -DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G G C CECN ++ CD G C Q ++G H E V
Sbjct: 1799 DPNGPYGGYCIPCECN-----GHSETCDCATGICTGCQHGTQGE-HCEDCVSGYYGNATN 1852
Query: 152 GNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---- 203
G I D C D+ ++ + +E C+C+PG TG +C+ C Y
Sbjct: 1853 GTPI-DCMICACPLPFDSNNFATSCEIS-ESGNEIHCECRPGYTGPRCESCANGFYGNPE 1910
Query: 204 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+ G+ CK C+C+ + ++ +CD+ G+C C +N GA C
Sbjct: 1911 NVGDV-CKPCDCSGNINPEDQGSCDTRTGECLRCLNNTFGAAC 1952
>gi|195338403|ref|XP_002035814.1| GM15516 [Drosophila sechellia]
gi|194129694|gb|EDW51737.1| GM15516 [Drosophila sechellia]
Length = 2682
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C + G C+KCR ++ + C C C+P GS +CN G+C CK GV G C+
Sbjct: 478 CLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIGVGGQHCN 537
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGR-----VHTELR 141
C + F GC+ C C G V CD G+C + + RG V
Sbjct: 538 ECTEGFFGFSTEGCQRCSACRSEGQV-----CDPHNGRCICPKFT-RGLGCGQCVPGTWG 591
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
Q+R R C+ D H GS+ QC++ +G+CQC+ G +G KCD C +
Sbjct: 592 WQARLG----------CRECECD-----HIGSIGQQCSTGDGQCQCREGYSGRKCDTCAI 636
Query: 201 NHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
++ + E C+ C C+ GS + CDS GQC CK V G +C
Sbjct: 637 GYFGYPE--CRRCGCDAEGSFTQADGSIACDS-NGQCPCKSLVVGLKC 681
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 113/290 (38%), Gaps = 90/290 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG SN C G+C DC + G CE+C+ YY
Sbjct: 159 CPCNGHSNSCDL---------QSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTPNDCKRC 209
Query: 47 ----QKSGDNFCTACNCNPIGSLNLQCNSEGR-------CQCKPGVTGDKCDRCDVNHY- 94
+ +NF +C ++L E QC G TGD C CD ++
Sbjct: 210 ACPLPEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFG 269
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G + C+ C+C AG C+ G+C + + ++ G
Sbjct: 270 NPRQLG-SSCQRCDC--AGG-----PCNVTTGECITCRGNTEG----------------- 304
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCN----------------SEGRCQCKPGVTGDKC 195
W RCK LG+ G + C+ ++G+C CKP G KC
Sbjct: 305 ----WHCERCK-----LGYWGDPAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKC 355
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D CDV + + E C SC C+P GS+ + CD GQC CK+ V GA+C
Sbjct: 356 DECDVGYANV-ELRCPSCNCDPLGSL-DQDRCDPHTGQCHCKEGVMGAKC 403
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 29 CQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGD 84
C+ G CE+C+ Y+ + + C CNC+P G C+ E GRC C+ GVTG
Sbjct: 1049 CKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRCFCREGVTGH 1108
Query: 85 KCDRCDVNHYDFGEAGCKSCE 105
KCD+C + + GCK C+
Sbjct: 1109 KCDKCQAERHHLVDNGCKICD 1129
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
H G C+ C G C +C + C C C+ IGS+ QC++ +G+CQC+ G
Sbjct: 567 HNGRCI-CPKFTRGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREG 625
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN---TPNCDSVKGQC 125
+G KCD C + ++ + E C+ C C+ GS + CDS GQC
Sbjct: 626 YSGRKCDTCAIGYFGYPE--CRRCGCDAEGSFTQADGSIACDS-NGQC 670
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C+CNG S+ C D+E G C +C+G+ G +C +C + +Y + + C AC C
Sbjct: 977 CHCNGRSSDC--DRE-------TGVCQNCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPC 1027
Query: 60 NPIGSLNLQ-----CNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAG 110
P + N + E C CKPG TG C+RC ++ + C+ C C+P G
Sbjct: 1028 -PETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDG 1086
Query: 111 SVKNTPNCDSVKGQC 125
T CD G+C
Sbjct: 1087 I--QTEGCDVETGRC 1099
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 102/269 (37%), Gaps = 75/269 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL-QCNSE-GRCQCKPGV 81
G CL C+ G C++C Y + + C +CNC+P+GSL+ +C+ G+C CK GV
Sbjct: 342 GQCL-CKPRYAGQKCDECDVGY--ANVELRCPSCNCDPLGSLDQDRCDPHTGQCHCKEGV 398
Query: 82 TGDKCDRCDVNHYDF------------------------------------GEAGCKSCE 105
G KC C ++ C+ C
Sbjct: 399 MGAKCHECQDGYFGMNAVADRMDDLAALRQNSDSDDDDWELVPDTEDPNSESAVACEECH 458
Query: 106 CNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL------ 158
C+ GS+ + +CD GQC A ++ R D W+L
Sbjct: 459 CSSVGSLSS--DCDKRTGQCACLANVTGR-------------RCDKCRPGHWNLTAGEGC 503
Query: 159 RRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE-CN 216
R C+ D + GS +CN G+C CK GV G C+ C + F GC+ C C
Sbjct: 504 RDCRCDPH-----GSRGHECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACR 558
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G V CD G+C C G C
Sbjct: 559 SEGQV-----CDPHNGRCICPKFTRGLGC 582
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 181 EGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
E C CKPG TG C+RC ++ + C+ C C+P G T CD G+C C
Sbjct: 1044 EVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGI--QTEGCDVETGRCFC 1101
Query: 237 KDNVEGAQC 245
++ V G +C
Sbjct: 1102 REGVTGHKC 1110
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
GRC C+ GVTG KCD+C + + GCK C+
Sbjct: 1097 GRCFCREGVTGHKCDKCQAERHHLVDNGCKICD 1129
>gi|297697850|ref|XP_002826053.1| PREDICTED: netrin-3, partial [Pongo abelii]
Length = 482
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 213 CSCNGHARRCRFNMELYRLSGRRTGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 272
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 273 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 309
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 34/149 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 157 CKCNGHASRCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESH 208
Query: 53 FCTACNCNPIG---SLNLQC-NSEGR------CQCKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ GR C+ G C C Y D G A
Sbjct: 209 ACLACSCNGHARRCRFNMELYRLSGRRTGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 268
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 269 DRRACRACDCHPVGAAGKT--CNQTTGQC 295
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C Y D G A C++C+C+P G+ T C+ GQC CKD
Sbjct: 243 CRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKT--CNQTTGQCPCKDG 300
Query: 240 VEGAQC 245
V G C
Sbjct: 301 VTGLTC 306
>gi|194862946|ref|XP_001970200.1| GG10498 [Drosophila erecta]
gi|190662067|gb|EDV59259.1| GG10498 [Drosophila erecta]
Length = 1786
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 33 RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDV 91
+ P C+ DN + + CNCNP GSL+ +C S G CQCKP V G +CD C
Sbjct: 766 KSDPKCQNL-DNILSVFVHDGASMCNCNPTGSLSKECESNGGHCQCKPNVVGRQCDLCAP 824
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
Y FG GCK+C+CN GS N NCD + GQC+
Sbjct: 825 GTYGFGPEGCKACDCNSIGSKDN--NCDVITGQCQ 857
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 90/227 (39%), Gaps = 69/227 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---SEGRCQCKPG 80
G CL C G +CE C+D ++ + C C+C+ +G+ N + G+C C P
Sbjct: 1010 GACLKCLYQTTGDHCELCKDGFFGDALQQNCQQCDCDFLGTNNTIAHCDRYTGQCPCLPN 1069
Query: 81 VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G +CD+C NH+ GC+SC NCD +
Sbjct: 1070 VQGVRCDQCAENHWKIASGEGCESC------------NCDPI------------------ 1099
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
G+L+ QCNS G+CQCKPG G C++C
Sbjct: 1100 --------------------------------GALHEQCNSYTGQCQCKPGFGGRACNQC 1127
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+++ C+ CEC+ G+ CD G C C + + G +C
Sbjct: 1128 QAHYWGNPNEKCQPCECDQFGAADY--QCDRETGNCVCHEGIGGYKC 1172
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 56/236 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CN + C FD+ ++ +G GG C +C + G +CE+C +Y+ + D+
Sbjct: 355 CECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSDSV 414
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C+C+P GS + C+S G C CK VTG +C++C +++ G
Sbjct: 415 CQPCDCDPQGSSDDGICDSLNDPEDGALAGACHCKAFVTGRRCNKCKDGYWNLQSDNPEG 474
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C CN G+ +N C G+C+ + + G+ D +
Sbjct: 475 CEPCTCNILGT-ENNSGCVMRTGECKCKKYVT-GK---------------------DCNQ 511
Query: 161 CKRDTYPLGH------------GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
C +TY L GGS + C+ G+C+C+P +TG C + N++
Sbjct: 512 CMPETYGLSESPEGCSLCNCDAGGSYDNYCDVISGQCRCRPHMTGRSCSQPKQNYF 567
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C+CK VTG C++C Y E+ GC C C+ GS N CD + GQC C+ +
Sbjct: 496 GECKCKKYVTGKDCNQCMPETYGLSESPEGCSLCNCDAGGSYDNY--CDVISGQCRCRPH 553
Query: 240 VEGAQC 245
+ G C
Sbjct: 554 MTGRSC 559
>gi|348536620|ref|XP_003455794.1| PREDICTED: laminin subunit alpha-1 [Oreochromis niloticus]
Length = 3050
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 100/230 (43%), Gaps = 48/230 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C C+ + G C+ C+ +Y + C C C+ GSL C+ EG+CQC GVTG
Sbjct: 908 GQCF-CRENVTGRTCDHCKSGFYGLQSGHGCIPCGCSKSGSLFESCDKEGQCQCVEGVTG 966
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
KCDRC +Y F + GC +C C+ G NC+ G+C
Sbjct: 967 HKCDRCSRGYYGFHDKGCIACSCDHTGG-----NCNPENGEC------------------ 1003
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGH-------------GGSLNLQCN-SEGRCQCKPG 189
PA +C ++ + GH GS + C+ + G+C CK G
Sbjct: 1004 ----ICPAHTEGETCNKCVKNYW--GHNPTTGCKPCSCSEAGSSSPLCDLTNGQCLCKEG 1057
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G CD+C +Y G C +C C+ AG+ + C++ G C C++
Sbjct: 1058 FFGRSCDQCAPGYY--GYPACSACGCDMAGTEETF--CNATLGVCSCQNT 1103
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 104/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCN-SEGRCQCK 78
G CL C G+ G +CE C+ YY GD C C+C+ G+L+ QCN + G+C C+
Sbjct: 857 GECLRCLGNTAGRHCELCQPGYY---GDAVHTKDCWECDCDVNGALSSQCNVTTGQCFCR 913
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
VTG CD C Y GC C C+ +GS+ + CD +GQC+ +
Sbjct: 914 ENVTGRTCDHCKSGFYGLQSGHGCIPCGCSKSGSLFES--CDK-EGQCQCVE-------- 962
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE--------GRCQCKPG 189
G++ RC R Y G + C+ G C C
Sbjct: 963 -----------GVTGHKC---DRCSRGYYGFHDKGCIACSCDHTGGNCNPENGECICPAH 1008
Query: 190 VTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ C++C N++ GCK C C+ AGS ++P CD GQC CK+ G C
Sbjct: 1009 TEGETCNKCVKNYWGHNPTTGCKPCSCSEAGS--SSPLCDLTNGQCLCKEGFFGRSC 1063
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 113/285 (39%), Gaps = 77/285 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G C+ C + G +C++C +Y + + F C +P G
Sbjct: 744 GVCVACTHNTTGSHCDQCLQGFYGDATEGTTDDCQLCPCPLTEPSNRFSPTCVLDPSG-- 801
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVK 122
+ C+ QCK G TG C++C Y + C CECN + +CD+V
Sbjct: 802 QVLCD-----QCKDGYTGTNCEKCASGFYGNPQVVGGTCIRCECNGNVDISEVGHCDTVT 856
Query: 123 GQCESAQLSSRGR-------------VHT----------------ELRVQSRKNF--DPA 151
G+C ++ GR VHT + V + + F +
Sbjct: 857 GECLRCLGNTAGRHCELCQPGYYGDAVHTKDCWECDCDVNGALSSQCNVTTGQCFCRENV 916
Query: 152 GNRIWDLRRCKRDTYPL--GHG---------GSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
R D CK Y L GHG GSL C+ EG+CQC GVTG KCDRC
Sbjct: 917 TGRTCD--HCKSGFYGLQSGHGCIPCGCSKSGSLFESCDKEGQCQCVEGVTGHKCDRCSR 974
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+Y F + GC +C C+ G NC+ G+C C + EG C
Sbjct: 975 GYYGFHDKGCIACSCDHTGG-----NCNPENGECICPAHTEGETC 1014
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+ ++ C++++ + + + GG C +CQ + G NCE C+D YY+ +
Sbjct: 325 CNCHNKADNCYYNQTISDLSLSLNTHGVRRGGGVCFNCQQNTAGINCETCKDGYYRPAEV 384
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSE--------GRCQCKPGVTGDKCDRCDVNHYDFGE 98
D C C C+ GS + C + G+C CK G G +CDRC + DF +
Sbjct: 385 SPYSDFPCVECKCDLRGSKSSVCTRDNTQPGLLVGQCMCKEGFAGQQCDRCAFGYRDFPQ 444
Query: 99 AGCKSCECNPAGSVKNTP 116
C CECN +GS+ P
Sbjct: 445 --CVRCECNLSGSINTDP 460
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G G +CDRC + DF + C CECN +GS+ NT C C CK+NV
Sbjct: 419 GQCMCKEGFAGQQCDRCAFGYRDFPQ--CVRCECNLSGSI-NTDPCSP----CICKENVM 471
Query: 242 GAQC 245
GA C
Sbjct: 472 GAHC 475
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 59/138 (42%), Gaps = 23/138 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CN S C+ + G C DC+ G +CEKC YY K + C+ C
Sbjct: 1394 CRCNNHSQSCYTET---------GECQDCKHHTSGQSCEKCASGYYGSVKGFIDDCSPCA 1444
Query: 59 CNPI-GSLNLQCNSEG-----RCQ-CKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNP 108
C + S + C EG RC C+PG G C+RC V +Y C C C
Sbjct: 1445 CPLLNNSFSPTCILEGAAGDFRCTACQPGYEGRYCERCSVGYYGNPSVPGGVCSQCSCTA 1504
Query: 109 AGSVKNTPNCDSVKGQCE 126
GS+ CD + G+CE
Sbjct: 1505 WGSLHLL--CDVLTGECE 1520
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 73/197 (37%), Gaps = 60/197 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C +G C KC NY+ + C C+C+ GS + C+ + G+C CK G
Sbjct: 1001 GECI-CPAHTEGETCNKCVKNYWGHNPTTGCKPCSCSEAGSSSPLCDLTNGQCLCKEGFF 1059
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C +Y G C +C C+ AG+ + C++ G C
Sbjct: 1060 GRSCDQCAPGYY--GYPACSACGCDMAGTEETF--CNATLGVCS---------------- 1099
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
C + G C CKPGV+G +C+ C
Sbjct: 1100 -----------------------------------CQNTGNCVCKPGVSGRRCEECVSGW 1124
Query: 203 YDFGEA---GCKSCECN 216
+ GC C C+
Sbjct: 1125 FGLSAENLDGCLQCFCS 1141
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 4 NGFSNRCFFDKELYNRTGHGG--HCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNC 59
N FS C + G G C CQ +G CE+C YY C+ C+C
Sbjct: 1450 NSFSPTCILE-------GAAGDFRCTACQPGYEGRYCERCSVGYYGNPSVPGGVCSQCSC 1502
Query: 60 NPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
GSL+L C+ G C+CK GV G C+ C+ + F E C SC+
Sbjct: 1503 TAWGSLHLLCDVLTGECECKDGVKGQSCNECEERNI-FQEGECVSCD 1548
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C+PG G C+RC V +Y C C C GS+ CD + G+CECKD V+G
Sbjct: 1470 CQPGYEGRYCERCSVGYYGNPSVPGGVCSQCSCTAWGSLHLL--CDVLTGECECKDGVKG 1527
Query: 243 AQC 245
C
Sbjct: 1528 QSC 1530
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 76/232 (32%), Gaps = 73/232 (31%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC-QCKPGVTG 83
+C G +CE C +Y+ G F C C CN + +C+ G C C TG
Sbjct: 699 ECPWGYSGTSCESCLPGFYRVGGILFGGNCMQCECNDHAT---ECDIHGVCVACTHNTTG 755
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNCDSVKGQCESAQLSSRGRVH 137
CD+C Y G C+ C C P N +P C
Sbjct: 756 SHCDQCLQGFYGDATEGTTDDCQLCPC-PLTEPSNRFSPTC------------------- 795
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
DP+G + D QCK G TG C++
Sbjct: 796 ---------VLDPSGQVLCD---------------------------QCKDGYTGTNCEK 819
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
C Y + C CECN + +CD+V G+C C N G C
Sbjct: 820 CASGFYGNPQVVGGTCIRCECNGNVDISEVGHCDTVTGECLRCLGNTAGRHC 871
>gi|449494739|ref|XP_002195244.2| PREDICTED: laminin subunit alpha-3 [Taeniopygia guttata]
Length = 3421
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 103/259 (39%), Gaps = 64/259 (24%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + CF+D ++ N GH GG C++CQ + G NCEKC YY+ G
Sbjct: 425 CNCHGHATDCFYDADVDQQRASLNIHGHYEGGGVCINCQHNTAGINCEKCAKGYYRPYGV 484
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+CN + + S GRC CK GD C+RC Y G C
Sbjct: 485 PVRAPDGCIPCSCNLEHADGCEEGS-GRCFCKQNFQGDHCERCADGFY-----GYPFCVY 538
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P ++ D V G D+ CK +
Sbjct: 539 TPVYPFTSSIPSDGVAG---------------------------------DIIVCKCNLL 565
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
G+ C+ GRC C+ V G +CD C H+ F + EC+PAGS+
Sbjct: 566 -----GTQPEVCDFLGRCLCRSEVAGLQCDSCQPGHHSFPACQGVNSECDPAGSI----- 615
Query: 227 CDSVKGQCECKDNVEGAQC 245
S G C+C +VEG C
Sbjct: 616 -GSHSGFCQCLQHVEGPTC 633
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 107/258 (41%), Gaps = 64/258 (24%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCT---------------------ACNCNPI 62
G C C+ + G +CE+C D +Y G FC C CN +
Sbjct: 510 GRCF-CKQNFQGDHCERCADGFY---GYPFCVYTPVYPFTSSIPSDGVAGDIIVCKCNLL 565
Query: 63 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 122
G+ C+ GRC C+ V G +CD C H+ F + EC+PAGS+ S
Sbjct: 566 GTQPEVCDFLGRCLCRSEVAGLQCDSCQPGHHSFPACQGVNSECDPAGSI------GSHS 619
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR--------CKRDTYPLGHGGSL 174
G C+ Q H E S+ W+L + C+ D G+L
Sbjct: 620 GFCQCLQ-------HVEGPTCSK-----CKPLYWNLAKENPEGCTACQCDV-----SGTL 662
Query: 175 N--LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCD 228
+ +C E G C CK V G+ CD C+ +Y + GC+ C C+ GS+ +P C
Sbjct: 663 SGVAECQQENGHCYCKSNVCGESCDTCEAGYYALEKKNYFGCQGCRCDVGGSL--SPACS 720
Query: 229 SVKGQCECKDNVEGAQCR 246
G C+C+ +V G CR
Sbjct: 721 QPWGSCQCRAHVVGTTCR 738
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C+DCQ + G CE C+D Y+ + C C C
Sbjct: 1723 CNCNGNSNRC---------QDGTGKCIDCQYNTAGEKCEHCKDGYFGDATQGSCRECPCP 1773
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
C + G +C CK G TG +C+RC ++ +G C+ C CN G +
Sbjct: 1774 YTNRFAAGCVANGEEIQCLCKEGYTGARCERCAPGYFGNPQKYG-GFCQKCNCNNNGQLA 1832
Query: 114 NTPNCDSVKGQC 125
+CD + G+C
Sbjct: 1833 ---SCDHLTGEC 1841
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 51 DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ G+ + C+ G +C C+P V G +C RC +Y F CK C C
Sbjct: 1294 NNGALPCACHSAGAASPACSPLGGQCVCRPNVIGRQCSRCQTGYYGF--PFCKLCNCGQR 1351
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
CD + G+C + + + E+ + ++ P L CK +
Sbjct: 1352 -------LCDDMTGKCICPPRTVKPK--CEVCEKYYFSYHP-------LAGCKSCNCSEK 1395
Query: 169 GHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G + +C+ + G+C+CKPG+ G +CD+C Y F C C CN G+ + C
Sbjct: 1396 GIVDVASPECDKTSGQCKCKPGIKGRQCDQCAPGTYGF--PNCVPCSCNRDGTEPDV--C 1451
Query: 228 DSVKGQCECKDNVEGAQC 245
D G C CK+NVEGA C
Sbjct: 1452 DPQTGICLCKENVEGATC 1469
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKPGVTGDKCDRCDV 91
P CE C Y+ C +CNC+ G +++ + G+C+CKPG+ G +CD+C
Sbjct: 1369 PKCEVCEKYYFSYHPLAGCKSCNCSEKGIVDVASPECDKTSGQCKCKPGIKGRQCDQCAP 1428
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F C C CN G+ + CD G C
Sbjct: 1429 GTYGF--PNCVPCSCNRDGTEPDV--CDPQTGIC 1458
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 83/214 (38%), Gaps = 48/214 (22%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C+ C+ + G C +C+ YY G FC CNC L + G+C C P
Sbjct: 1316 GGQCV-CRPNVIGRQCSRCQTGYY---GFPFCKLCNCGQ----RLCDDMTGKCICPPRTV 1367
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGSV-KNTPNCDSVKGQCESAQLSSRGRVHTEL 140
KC+ C+ ++ + AGCKSC C+ G V +P CD GQC+ + +GR
Sbjct: 1368 KPKCEVCEKYYFSYHPLAGCKSCNCSEKGIVDVASPECDKTSGQCK-CKPGIKGR----- 1421
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR-----------CQCKPG 189
+C TY G + CN +G C CK
Sbjct: 1422 ----------------QCDQCAPGTY--GFPNCVPCSCNRDGTEPDVCDPQTGICLCKEN 1463
Query: 190 VTGDKCDRCDVNHYDFGEA---GCKSCECNPAGS 220
V G CD C + + GC C C A S
Sbjct: 1464 VEGATCDTCRRGSFYLNPSNPRGCTPCFCFGATS 1497
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 38/194 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN--CNPIGSLNLQCNSEGRCQCKPGV 81
G CL C+ + G C+ C+ ++ C N C+P GS+ + G CQC V
Sbjct: 576 GRCL-CRSEVAGLQCDSCQPGHHSFPA---CQGVNSECDPAGSIG---SHSGFCQCLQHV 628
Query: 82 TGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC--------ESAQL 130
G C +C +++ + GC +C+C+ +G++ C G C ES
Sbjct: 629 EGPTCSKCKPLYWNLAKENPEGCTACQCDVSGTLSGVAECQQENGHCYCKSNVCGESCDT 688
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPG 189
G E +KN+ + + C+ D GGSL+ C+ G CQC+
Sbjct: 689 CEAGYYALE-----KKNY-------FGCQGCRCDV-----GGSLSPACSQPWGSCQCRAH 731
Query: 190 VTGDKCDRCDVNHY 203
V G C + N++
Sbjct: 732 VVGTTCREPEKNYF 745
>gi|284005150|ref|NP_001164710.1| netrin 4 precursor [Saccoglossus kowalevskii]
gi|283464047|gb|ADB22607.1| netrin4 [Saccoglossus kowalevskii]
Length = 610
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTA-- 56
C CNG ++ C FD +L++ T + GG C C+ G NC+ C YY+ S F A
Sbjct: 330 CECNGHADSCHFDSKLWDSTNYVTGGVCDSCKHHTTGTNCQLCESGYYRDSTKEFTAANA 389
Query: 57 ---CNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+P G+ N C+ + G C CK GV CD C +Y FG GC+ C C
Sbjct: 390 CKRCRCDPTGTSNRPCDEASGICFCKKGVAEPLCDMCLPGYYGFGRNGCRECTC 443
>gi|444712135|gb|ELW53066.1| Netrin-1 [Tupaia chinensis]
Length = 299
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 35 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 94
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C +P
Sbjct: 95 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIMSPV 150
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C +Y D G+ CK+C+C+P G+ T C+ GQC CKD
Sbjct: 65 CRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGKT--CNQTTGQCPCKDG 122
Query: 240 VEGAQC 245
V G C
Sbjct: 123 VTGITC 128
>gi|402594018|gb|EJW87945.1| hypothetical protein WUBG_01144 [Wuchereria bancrofti]
Length = 531
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
CNCN + RC F+ ELY +G+ GG C++C+ + G NC C+ Y++ +
Sbjct: 266 CNCNLHAKRCRFNMELYRLSGNKSGGVCINCRHNTAGRNCHYCKPGYFRDLTKSVTHRKV 325
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C ACNC+P+GSL+ CN S G+C CK GVTG C++C
Sbjct: 326 CKACNCHPVGSLSRSCNQSSGQCICKDGVTGLTCNQC 362
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 174 LNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
+N + N+ GR CKPG D V H CK+C C+P GS+ + C+
Sbjct: 294 INCRHNTAGRNCHYCKPGYFRDLTK--SVTH----RKVCKACNCHPVGSLSRS--CNQSS 345
Query: 232 GQCECKDNVEGAQC 245
GQC CKD V G C
Sbjct: 346 GQCICKDGVTGLTC 359
>gi|347963403|ref|XP_310908.5| AGAP000225-PA [Anopheles gambiae str. PEST]
gi|333467216|gb|EAA06389.5| AGAP000225-PA [Anopheles gambiae str. PEST]
Length = 717
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
CNCNG + RC F+ ELY +G GG CL C+ G +C CR+ +Y+ +
Sbjct: 394 CNCNGHARRCRFNMELYKMSGRISGGVCLSCRHATTGRHCHYCREGFYRDATKPITHRKV 453
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+PIGS CN + G+C CK GVTG C+RC
Sbjct: 454 CKACDCHPIGSSGKTCNHTTGQCPCKDGVTGLTCNRC 490
>gi|383861154|ref|XP_003706051.1| PREDICTED: laminin subunit alpha-2-like [Megachile rotundata]
Length = 2282
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 106/231 (45%), Gaps = 43/231 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ G C++C Y+ + C C C+PIGS N C+ G+C CKPGV G +CD
Sbjct: 84 CRPHVTGRQCDRCMVGYWGLTTGAGCAPCGCDPIGSHNSSCHDITGQCYCKPGVGGARCD 143
Query: 88 RCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
C +Y F GC+ C+ C G + CD G+C L+ H +
Sbjct: 144 NCLPGYYGFSSKGCQVCDPCLRPGHI-----CDPDTGRCICPMLTFGE--HCD------- 189
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHG----------GSLNLQCNSEGRCQCKPGVTGDKCD 196
RC+ ++ L G GS C+ +G+C C+ G G +C+
Sbjct: 190 -------------RCRPGSWDLVPGVGCRLCDCTLGSTRSHCDHQGQCPCRIGYDGRRCE 236
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVK-NTPNCD-SVKGQCECKDNVEGAQC 245
+C +Y G C+ C CN AG+++ + CD + GQC CK++V G QC
Sbjct: 237 KCAKGYY--GYPRCRPCGCNVAGTLQCDNEVCDCNDDGQCPCKEHVYGRQC 285
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG S C D+E GHCL+C+G+ GP C+ C D++Y D C C C
Sbjct: 578 CQCNGRSEIC--DRE-------TGHCLNCRGNTAGPRCDVCADSFYGHP-DFGCKPCPCP 627
Query: 61 PI-----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSV 112
+ + N+E C CKPG TG +C++C +Y + C C CN AGS+
Sbjct: 628 QTDKRFSNTCMVLANTEAICVCKPGYTGRRCEQCSPGYYGLPHLPDGKCMPCNCNSAGSL 687
Query: 113 KNTPNCDSVKGQC 125
+ CD GQC
Sbjct: 688 SD--ECDMETGQC 698
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 57 CNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 114
C CN IGS+ C+ G+CQC+P VTG +CDRC V ++ AGC C C+P GS +
Sbjct: 63 CRCNNIGSITTACDIVTGQCQCRPHVTGRQCDRCMVGYWGLTTGAGCAPCGCDPIGS--H 120
Query: 115 TPNCDSVKGQC 125
+C + GQC
Sbjct: 121 NSSCHDITGQC 131
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
+ N+E C CKPG TG +C++C +Y + C C CN AGS+ + CD G
Sbjct: 639 VLANTEAICVCKPGYTGRRCEQCSPGYYGLPHLPDGKCMPCNCNSAGSLSD--ECDMETG 696
Query: 233 QCECKDNVEGAQC 245
QC C+ G C
Sbjct: 697 QCRCRAGSTGRDC 709
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ G CE+C YY D C CNCN GSL+ +C+ E G+C+C+ G TG
Sbjct: 649 CKPGYTGRRCEQCSPGYYGLPHLPDGKCMPCNCNSAGSLSDECDMETGQCRCRAGSTGRD 708
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C + + C SC N G + +T
Sbjct: 709 CSECTAYRHVYINNVCTSCNDNCTGILLDT 738
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-----CNSEGRCQ 76
H G C C+ DG CEKC YY G C C CN G+L CN +G+C
Sbjct: 220 HQGQC-PCRIGYDGRRCEKCAKGYY---GYPRCRPCGCNVAGTLQCDNEVCDCNDDGQCP 275
Query: 77 CKPGVTGDKCDRCDVNHYDFG---EAGCKSCEC 106
CK V G +C++C + GC C C
Sbjct: 276 CKEHVYGRQCNQCKEGTFGLAVDTPKGCTECFC 308
>gi|440913501|gb|ELR62950.1| Netrin-3, partial [Bos grunniens mutus]
Length = 381
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 228 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 287
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 288 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 324
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 34/149 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH DC+ +GP+C +C+ Y +Q++ +
Sbjct: 172 CKCNGHASRCLLDPQ--------GHLTCDCRHGTEGPDCSRCKPFYCDRPWQRATAREAH 223
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 224 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 283
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 284 DRRACRACDCHPVGAAGKT--CNQTTGQC 310
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C Y D G A C++C+C+P G+ T C+ GQC CKD
Sbjct: 258 CRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKT--CNQTTGQCPCKDG 315
Query: 240 VEGAQC 245
V G C
Sbjct: 316 VTGLTC 321
>gi|312072905|ref|XP_003139279.1| hypothetical protein LOAG_03694 [Loa loa]
gi|307765560|gb|EFO24794.1| hypothetical protein LOAG_03694 [Loa loa]
Length = 409
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G+ GG C++C+ + G NC C+ Y++ +
Sbjct: 266 CNCNLHAKRCRFNMELYRLSGNKSGGVCINCRHNTAGRNCHYCKPGYFRDLTKSITHRKA 325
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C ACNC+P+GSL+ CN S G+C CK GVTG C++C
Sbjct: 326 CKACNCHPVGSLSRSCNQSSGQCICKDGVTGLTCNQC 362
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG ++RC DK G + DC+ + G +CE+C+ + + N
Sbjct: 210 CKCNGHASRCILDKT-------GNYICDCKHNTAGADCERCKTFHLDRPWGRATSENANH 262
Query: 54 CTACNCNPIGS---LNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C ++ D ++
Sbjct: 263 CVACNCNLHAKRCRFNMELYRLSGNKSGGVCINCRHNTAGRNCHYCKPGYFRDLTKSITH 322
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C C+P GS+ + C+ GQC
Sbjct: 323 RKACKACNCHPVGSLSRS--CNQSSGQC 348
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 171 GGSLNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
G +N + N+ GR CKPG D + H CK+C C+P GS+ + C+
Sbjct: 291 GVCINCRHNTAGRNCHYCKPGYFRDLTK--SITH----RKACKACNCHPVGSLSRS--CN 342
Query: 229 SVKGQCECKDNVEGAQC 245
GQC CKD V G C
Sbjct: 343 QSSGQCICKDGVTGLTC 359
>gi|297271904|ref|XP_001113322.2| PREDICTED: netrin-1 isoform 1 [Macaca mulatta]
Length = 608
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPISHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + SC P +
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIASC-LEPHKEI 458
Query: 113 KNTPNCDSVKG-----QCESAQLSSRGRVHTELRVQSRKNF 148
P + C+S +S+G++ ++ +K++
Sbjct: 459 PVAPPTTTASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 499
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPISH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
>gi|77993334|ref|NP_001030158.1| laminin subunit alpha-1 precursor [Danio rerio]
gi|71370785|gb|AAZ30636.1| laminin alpha 1 [Danio rerio]
Length = 3075
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C++C++ Y+ + C C CN G+L+ C+ EGRCQC GVTGDKCD
Sbjct: 925 ECKHNVVGKTCDRCQEGYHGINSGEGCRPCECNQSGALSASCDEEGRCQCITGVTGDKCD 984
Query: 88 RCDVNHYDFGEAGCKSCEC 106
RC +Y+F E GC +C+C
Sbjct: 985 RCHHGYYNFKENGCTACDC 1003
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 99/244 (40%), Gaps = 58/244 (23%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQK--SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPG--- 80
C CQ G C++C D Y+ + C+ C CN N+ + GRC G
Sbjct: 819 CDQCQSGYTGDKCQRCADGYFGEPVVPGQRCSPCECNG----NVDPSEAGRCDTHTGECL 874
Query: 81 -----VTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
G C+RC +Y E C++C C GS+ C+ + GQCE
Sbjct: 875 KCVGHTAGPHCERCRDGYYGDAIQEKNCQACGCYSNGSLSTI--CNLITGQCECKH---- 928
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTYPLGHG-----------GSLNLQCNSE 181
N + RC+ + + G G+L+ C+ E
Sbjct: 929 -------------------NVVGKTCDRCQEGYHGINSGEGCRPCECNQSGALSASCDEE 969
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
GRCQC GVTGDKCDRC +Y+F E GC +C+C NC+ G+C C +
Sbjct: 970 GRCQCITGVTGDKCDRCHHGYYNFKENGCTACDC-----AHTHGNCNGQTGECICPPHTH 1024
Query: 242 GAQC 245
G +C
Sbjct: 1025 GLKC 1028
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 112/241 (46%), Gaps = 34/241 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLN-------LQCNSEG 73
G CL C + GP+C++C +Y + + C C+C + N LQ E
Sbjct: 758 GECLGCAHNTTGPHCDQCLPGFYGDASEGTPDDCQRCSCPLTLASNNFSPTCQLQAPGEF 817
Query: 74 RC-QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
C QC+ G TGDKC RC + FGE C CECN CD+ G+C
Sbjct: 818 ICDQCQSGYTGDKCQRCADGY--FGEPVVPGQRCSPCECNGNVDPSEAGRCDTHTGECLK 875
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQ 185
+ G H E + R + G+ I + + C+ Y GSL+ CN G+C+
Sbjct: 876 CVGHTAGP-HCE---RCRDGY--YGDAIQE-KNCQACGCYS---NGSLSTICNLITGQCE 925
Query: 186 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
CK V G CDRC ++ GC+ CECN +G++ + +CD +G+C+C V G +
Sbjct: 926 CKHNVVGKTCDRCQEGYHGINSGEGCRPCECNQSGAL--SASCDE-EGRCQCITGVTGDK 982
Query: 245 C 245
C
Sbjct: 983 C 983
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+ ++ CF+++ + N G GG C++C+ + G NCE C D YY+
Sbjct: 334 CNCHNKADDCFYNQTVADLKLSMNTHGQFTGGGVCVNCRHNTAGVNCETCADGYYRPHQV 393
Query: 50 ---GDNFCTACNCNPIGSLNLQCN------------SEGRCQCKPGVTGDKCDRCDVNHY 94
+ C C C+ GS++ C S G+C CK G G+KCDRC
Sbjct: 394 SPYAEEPCVECQCDMRGSVSPVCIRDDNHANPDAGLSPGQCVCKEGFAGEKCDRCAFGFR 453
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
DF C CECN GS P
Sbjct: 454 DF--PVCSRCECNLDGSHNTDP 473
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQCNSEG----R 74
H G CL CQ + G +C C YY K + C+ C C G S + C EG R
Sbjct: 1419 HTGQCLGCQHNTAGEHCHVCAAGYYGKVQGSVSDCSLCACPLRGQSFSSTCVLEGAGDFR 1478
Query: 75 C-QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCE 126
C +C+ G G C+RC V ++ + E G C+ C C+ +GSV + CD+ G+CE
Sbjct: 1479 CDRCEEGYEGRYCERCAVGYFGNPSEPGGRCQVCACSESGSVHSV--CDAHTGRCE 1532
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG-SLNLQCNSEGRCQCKP 79
G G C+ C G CE+C + ++ G + C CNC+ +G S + S G+C C
Sbjct: 1012 GQTGECI-CPPHTHGLKCEQCDEGHWGHDGVSGCKVCNCSVVGSSSSQCDLSSGQCVCAL 1070
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+G CDRC + + +F + C +C+CNP G+ CD G C
Sbjct: 1071 QFSGLTCDRCALGYRNFPQ--CSACDCNPNGT--RAQFCDEALGVC 1112
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
S G+C CK G G+KCDRC DF C CECN GS NT C +C CK N
Sbjct: 430 SPGQCVCKEGFAGEKCDRCAFGFRDF--PVCSRCECNLDGS-HNTDPC----MECVCKAN 482
Query: 240 VEGAQC 245
V G+ C
Sbjct: 483 VMGSHC 488
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ +G CE+C Y+ + C C C+ GS++ C++ GRC+CKPGV G
Sbjct: 1482 CEEGYEGRYCERCAVGYFGNPSEPGGRCQVCACSESGSVHSVCDAHTGRCECKPGVRGHL 1541
Query: 86 CDRCDVNHYDFGEAGCKSC 104
CD+C+ H E C SC
Sbjct: 1542 CDQCEERHVLVHEQ-CVSC 1559
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV--------KGQ 233
G+C C +G CDRC + + +F + C +C+CNP G+ CD GQ
Sbjct: 1064 GQCVCALQFSGLTCDRCALGYRNFPQ--CSACDCNPNGT--RAQFCDEALGVCGCEDHGQ 1119
Query: 234 CECKDNVEGAQC 245
C CKDNV G C
Sbjct: 1120 CSCKDNVGGRGC 1131
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 171 GGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVK 222
G S + C EG RC +C+ G G C+RC V ++ + E G C+ C C+ +GSV
Sbjct: 1462 GQSFSSTCVLEGAGDFRCDRCEEGYEGRYCERCAVGYFGNPSEPGGRCQVCACSESGSVH 1521
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ CD+ G+CECK V G C
Sbjct: 1522 SV--CDAHTGRCECKPGVRGHLC 1542
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 97/252 (38%), Gaps = 58/252 (23%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRCQ-CKPG 80
HC +C G +CE C +Y+ G F C C CN + +C+ G C C
Sbjct: 711 HC-ECPWGYSGTSCELCIPGFYRVGGILFGGNCLPCECNDHAT---ECDINGECLGCAHN 766
Query: 81 VTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN-TPNCDSVKGQCESAQLSSRGR 135
TG CD+C Y G C+ C C + N +P C QL + G
Sbjct: 767 TTGPHCDQCLPGFYGDASEGTPDDCQRCSCPLTLASNNFSPTC----------QLQAPGE 816
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTY---PLGHGG-------SLNLQCNSEGR 183
+ + QS D +C+R D Y P+ G + N+ + GR
Sbjct: 817 FICD-QCQSGYTGD----------KCQRCADGYFGEPVVPGQRCSPCECNGNVDPSEAGR 865
Query: 184 CQCKPG--------VTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
C G G C+RC +Y E C++C C GS+ C+ + GQ
Sbjct: 866 CDTHTGECLKCVGHTAGPHCERCRDGYYGDAIQEKNCQACGCYSNGSLSTI--CNLITGQ 923
Query: 234 CECKDNVEGAQC 245
CECK NV G C
Sbjct: 924 CECKHNVVGKTC 935
>gi|344278459|ref|XP_003411011.1| PREDICTED: laminin subunit gamma-2-like [Loxodonta africana]
Length = 1184
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 5 GFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS 64
G S +C FD+E+Y +TG+G CL C + DG +CE+C++ +Y++ + C CNCN GS
Sbjct: 25 GKSRQCIFDQEIYRQTGNGFRCLSCNDNTDGIHCERCKEGFYRQRERDRCLPCNCNSKGS 84
Query: 65 L-NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG--------EAGCKSCECNPAGSV 112
+C + QC P +TG++C C + G E C+C+PAG +
Sbjct: 85 TCAHRCTHTTKKQCSPKITGERCGNCLHKDHSLGNSWSAQDKEILDPKCDCDPAGIM 141
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 72/170 (42%), Gaps = 39/170 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +C++C+ Y+ GD C ACNCNP+GS ++C S+G C
Sbjct: 530 GRCLKCIHNTAGFHCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSAPVECRSDGSCV 586
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ-LSSRGR 135
CKPG G CD A SC PA + D Q +S + L S R
Sbjct: 587 CKPGFGGLNCD----------HAALTSC---PACYNQVKIQMDQFTQQLQSLEALVSEAR 633
Query: 136 -------VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
E R+Q A +W++ R + + G SLNLQ
Sbjct: 634 DGGAVPNAELEGRIQQ------AEEALWNILREAQISE--GAIRSLNLQL 675
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 106
C+C+P G + C++ G C CKP VTGD+CDRC +Y GC C C
Sbjct: 133 CDCDPAGIMG-PCDT-GHCVCKPAVTGDRCDRCRPGYYHLDAGNPEGCTQCFC 183
>gi|440901389|gb|ELR52343.1| Laminin subunit beta-3 [Bos grunniens mutus]
Length = 1165
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 120/267 (44%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ HGG C +C+ +G NCE+C+ +Y++
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGRNCERCQLHYFRNRRPGAPIQET 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ G+C CK V G++CD C + GC+ C+C+
Sbjct: 376 CIPCECDPDGAVPGAPCDPLTGQCVCKEHVQGERCDLCKPGFTGLTFSNPQGCRRCDCSV 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGR----VHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
G+ ++ P CD G+C + ++ S + +P C D
Sbjct: 436 LGARRDVP-CDEETGRCVCLPHVVGPKCDQCAPHHWKLASGRGCEP----------CACD 484
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH-----YDFGEAGCKSCECNPA 218
+ SL QCN G+C C+ G G C + Y AGC++C+C+
Sbjct: 485 PH-----NSLGPQCNQFTGQCACREGFGGLTCRAAAIRQCPDRTYGDAAAGCRACDCDFR 539
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD G+C C+ + G +C
Sbjct: 540 GT--EGPGCDKASGRCLCRPGLTGPRC 564
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 118/276 (42%), Gaps = 41/276 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLD---CQGDRDGPNCEKCRDNY----YQKSGD-- 51
C C+G ++RC + CQ + GPNCE+C Y ++ + D
Sbjct: 250 CLCHGHADRCAPSSRTPASPSSAVQVHEVCVCQHNTAGPNCERCAPFYNNRPWRPAEDQD 309
Query: 52 -NFCTACNCN---------PIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG 100
+ C C+CN P Q G C C+ G C+RC ++++ G
Sbjct: 310 PHECQRCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGRNCERCQLHYFRNRRPG 369
Query: 101 ------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
C CEC+P G+V P CD + GQC + V E + F G
Sbjct: 370 APIQETCIPCECDPDGAVPGAP-CDPLTGQC-----VCKEHVQGERCDLCKPGF--TGLT 421
Query: 155 IWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
+ + C+R D LG ++ C+ E GRC C P V G KCD+C +H+ GC+
Sbjct: 422 FSNPQGCRRCDCSVLG--ARRDVPCDEETGRCVCLPHVVGPKCDQCAPHHWKLASGRGCE 479
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C+P S+ P C+ GQC C++ G CR+
Sbjct: 480 PCACDPHNSLG--PQCNQFTGQCACREGFGGLTCRA 513
>gi|301773354|ref|XP_002922092.1| PREDICTED: laminin subunit beta-3-like [Ailuropoda melanoleuca]
Length = 1197
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 40/267 (14%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ +GG C +C+ +G NCE+C+ +Y++ S
Sbjct: 341 CDCNGHSESCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQET 400
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ + C+ G+C CK V G++CD C A GC C+C+
Sbjct: 401 CIPCECDPDGAVPGVPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCSL 460
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGR----VHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
GS ++ P C+ GQC + ++ S + +P C D
Sbjct: 461 LGSRRDMP-CNEESGQCLCLPHVVGPKCDQCAPYHWKLASGRGCEP----------CACD 509
Query: 165 TYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH---YDFGEAG--CKSCECNPA 218
+ SL QCN G+C C+ G +G C + +G+AG C++C+C+
Sbjct: 510 PH-----NSLGPQCNQFTGQCPCREGFSGLTCSAAAIRQCPDRTYGDAGTTCRACDCDFR 564
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD G+C C+ + G +C
Sbjct: 565 GT--EGPGCDKASGRCLCRPGLTGPRC 589
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 104/243 (42%), Gaps = 38/243 (15%)
Query: 29 CQGDRDGPNCEKC---RDNYYQKSGDN----FCTACNCN---------PIGSLNLQCNSE 72
CQ + GPNCE+C N + D+ C C+CN P Q +
Sbjct: 306 CQHNTAGPNCERCAPFHSNRPWRPADDQDPHECQRCDCNGHSESCHFDPAVFAASQGTNG 365
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C C+ G C+RC ++++ G C CEC+P G+V P CD V GQC
Sbjct: 366 GVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCIPCECDPDGAVPGVP-CDPVTGQC 424
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
+ V E + F G + + C R D L G ++ CN E G+
Sbjct: 425 -----VCKEHVQGERCDLCKPGF--TGLTYANPQGCHRCDCSLL--GSRRDMPCNEESGQ 475
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C P V G KCD+C H+ GC+ C C+P S+ P C+ GQC C++ G
Sbjct: 476 CLCLPHVVGPKCDQCAPYHWKLASGRGCEPCACDPHNSLG--PQCNQFTGQCPCREGFSG 533
Query: 243 AQC 245
C
Sbjct: 534 LTC 536
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 96
+C D Y +G C AC+C+ G+ C+ + GRC C+PG+TG +CD+C + D
Sbjct: 543 QCPDRTYGDAGTT-CRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQCQRGYCDL 599
>gi|149566529|ref|XP_001515541.1| PREDICTED: netrin-3-like, partial [Ornithorhynchus anatinus]
Length = 278
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CN + RC F+ ELY +G GG CL+C+ + G +C CR+ YY+ S
Sbjct: 15 CSCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCREGYYRDRARPVSDRRA 74
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC + + C PA S
Sbjct: 75 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC-AKGFQQSRSPVAPCIKIPATSP 133
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
CES ++G L+ +K++
Sbjct: 134 TAAVTSTEEPADCESYCKPAKGNYKINLKKYCKKDY 169
>gi|432845628|ref|XP_004065831.1| PREDICTED: netrin-1-like [Oryzias latipes]
Length = 602
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ S
Sbjct: 339 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKA 398
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 399 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVSPP 457
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ CES +S+G++ ++ +K++
Sbjct: 458 TTPASSTEEASDCESYCKASKGKLKINMKKYCKKDY 493
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG ++RC D++ G DC+ + GP C++C+ +Y + N
Sbjct: 283 CKCNGHASRCVKDRD-------GSLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANE 335
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C Y D +
Sbjct: 336 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISH 395
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 396 RKACKACDCHPVGAAGKT--CNQTTGQC 421
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 89/226 (39%), Gaps = 52/226 (23%)
Query: 27 LDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR--CQCKPGVTG 83
L GD + + E RD+Y+ D C CN S ++ + +G C CK G
Sbjct: 252 LHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVK-DRDGSLVCDCKHNTAG 310
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RV 142
+CDRC HYD + E N + NC+ +C R + EL ++
Sbjct: 311 PECDRCKPFHYDRPWQRATAREANECVAC----NCNLHARRC---------RFNMELYKL 357
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS-LNLQCNSEGR--CQCKPGVTGDKCDRCD 199
RK+ GG LN + N+ GR CK G D
Sbjct: 358 SGRKS-----------------------GGVCLNCRHNTAGRHCHYCKEGFYRDLSK--P 392
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++H CK+C+C+P G+ T C+ GQC CKD V G C
Sbjct: 393 ISH----RKACKACDCHPVGAAGKT--CNQTTGQCPCKDGVTGITC 432
>gi|291243792|ref|XP_002741784.1| PREDICTED: laminin B1-like [Saccoglossus kowalevskii]
Length = 626
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 24/234 (10%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGD 84
H C G NC C+++Y++ + C C CN G +N C+ GRC C GVTGD
Sbjct: 48 HLCICLPGYQGDNCTICKEDYFRYNESLPCEPCQCNSTGVVNNTCDRYGRCNCADGVTGD 107
Query: 85 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
KC C+ +Y+ GC C+CN ++ CD + G C ++ ++ +
Sbjct: 108 KCTSCEDGYYNLTTDGCSLCQCNGHATL-----CDKLTGICHDCANNTSSDDCSQCQPFY 162
Query: 145 RKNFDPAG---------NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
++++ + + C D + + G ++ C+S CK TG C
Sbjct: 163 YRDYNKTSEDSCEKCPCSEHSSTQTCHYDEHFNNNTG--DVVCDS-----CKLNYTGQFC 215
Query: 196 DRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+ CD N Y + C +C+CN + T NCDS+ G+C +C N G C
Sbjct: 216 NECDDNFYMSNTTLKVCTACDCNDNVILNQTGNCDSLTGECLKCVFNTTGDHCE 269
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 177 QCNSEGR-CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQC 234
+C+SE C C PG GD C C +++ + E+ C+ C+CN G V NT CD G+C
Sbjct: 42 KCDSETHLCICLPGYQGDNCTICKEDYFRYNESLPCEPCQCNSTGVVNNT--CDRY-GRC 98
Query: 235 ECKDNVEGAQCRS 247
C D V G +C S
Sbjct: 99 NCADGVTGDKCTS 111
>gi|432871176|ref|XP_004071870.1| PREDICTED: netrin-1-like [Oryzias latipes]
Length = 600
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN + RC F+ ELY +G GG CL+C+ + G +C C++ Y++
Sbjct: 340 CHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYFRDMSKPISHRRA 399
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P S
Sbjct: 400 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVASP 458
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+T + C+S +S+G++ ++ +K++
Sbjct: 459 TSTYSSYEEPSDCDSYCKASKGKMKITMKKYCKKDY 494
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 86/224 (38%), Gaps = 48/224 (21%)
Query: 27 LDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR--CQCKPGVTG 83
L GD + + E RD+Y+ D C CN S ++ + EG C+CK G
Sbjct: 253 LHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASKCVK-DREGNLVCECKHNTAG 311
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+CDRC HYD + E N + C + R R + EL
Sbjct: 312 PECDRCKPFHYDRPWQRATAREANECVA-------------CHCNLHARRCRFNMEL--- 355
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVN 201
+ +G R G LN + N+ GR CK G D ++
Sbjct: 356 ----YKLSGRR--------------SGGVCLNCRHNTAGRHCHYCKEGYFRDMSK--PIS 395
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
H CK+C+C+P G+ T C+ GQC CKD V G C
Sbjct: 396 H----RRACKACDCHPVGAAGKT--CNQTTGQCPCKDGVTGITC 433
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG +++C D+E G +C+ + GP C++C+ +Y + N
Sbjct: 284 CKCNGHASKCVKDRE-------GNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANE 336
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C AC+CN N++ S G C C+ G C C ++ D +
Sbjct: 337 CVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYFRDMSKPISH 396
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 397 RRACKACDCHPVGAAGKT--CNQTTGQC 422
>gi|348581898|ref|XP_003476714.1| PREDICTED: laminin subunit beta-2 [Cavia porcellus]
Length = 1800
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 105/267 (39%), Gaps = 83/267 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+G ++ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 349 CECHGHTHSCHFDMAIYLASGNVSGGVCDRCQHNTVGHHCELCRPFFYRDPMKDLRDPAV 408
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P+GS + C+S G+C+CK V G +C RC + + G
Sbjct: 409 CRPCDCDPMGSQDGGLCDSHDDAALGLVSGQCRCKEHVMGPRCQRCRSGFFGLSASDPLG 468
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CN G+V CD+ G C
Sbjct: 469 CRRCQCNTRGTVPGDTPCDANSGTC----------------------------------F 494
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPA 218
CKR GHG CD C H+ GC+ C C+
Sbjct: 495 CKRLV--TGHG-----------------------CDHCLPGHWGLSHDLLGCRPCNCDVG 529
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ P CD GQC C+ ++ G +C
Sbjct: 530 GALD--PQCDETTGQCHCRQHMVGRRC 554
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N +C C+P GSL+ +CN G +C+CKPGV G +C+ C +Y FG AGC++C+C+P G
Sbjct: 780 NGALSCQCDPEGSLSSECNPHGGQCRCKPGVVGRRCNICATGYYGFGPAGCQACQCSPEG 839
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 840 ALSGL--CEGTTGQC 852
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---------SEGR 74
G CL C +GP+C C+ ++ ++ C C CN +G+ QC S G+
Sbjct: 1007 GQCLRCLYHTEGPHCAYCKPGFHGQATRQSCHRCTCNLLGTNPQQCPSTDQCQCDLSSGQ 1066
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSS 132
C C P V G CDRC N ++F GC+ C C+ + +P C+ GQC A
Sbjct: 1067 CPCLPNVQGLSCDRCAPNFWNFTSGRGCQPCACHLTRA--RSPTCNEFTGQCNCHAGFGG 1124
Query: 133 RG-----RVHT-ELRVQSRK-NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQ 185
R +H + +Q R + DP G D +C R T G C
Sbjct: 1125 RSCSECQELHWGDPGLQCRACDCDPRG---IDTPQCHRST----------------GHCS 1165
Query: 186 CKPGVTGDKCDRC 198
C+PGV+G +CD+C
Sbjct: 1166 CRPGVSGVRCDQC 1178
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 13/89 (14%)
Query: 168 LGHGGSLNLQCNSE-----------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
L + G+L+ QC+ E G+C+CKPGV G +C+ C +Y FG AGC++C+C+
Sbjct: 777 LIYNGALSCQCDPEGSLSSECNPHGGQCRCKPGVVGRRCNICATGYYGFGPAGCQACQCS 836
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P G++ C+ GQC C+ G +C
Sbjct: 837 PEGALSGL--CEGTTGQCPCRTGAFGLRC 863
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 106/270 (39%), Gaps = 46/270 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C CNG ++ C H G CL+C+ G +CE+C +Y Q C C
Sbjct: 879 CICNGHADEC---------DTHTGICLNCRDHTGGEHCERCIAGFYGDPQLPYGGQCRPC 929
Query: 58 NC--NPIGSLNL--QCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCE 105
C P N C+ +G C C+ G TG +CD C H+ D G C CE
Sbjct: 930 PCPEGPESQRNFATSCHRDGYSQQIVCHCRSGYTGLRCDTCAPGHFGDPSRPGGRCLPCE 989
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR--VQSRKNFDPAGNRIWDLRRCKR 163
C+ + CD GQC R HTE + F R + C R
Sbjct: 990 CSGNIDPMDPDACDPRTGQC------LRCLYHTEGPHCAYCKPGFHGQATR----QSCHR 1039
Query: 164 ------DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCEC 215
T P + QC+ S G+C C P V G CDRC N ++F GC+ C C
Sbjct: 1040 CTCNLLGTNPQQCPSTDQCQCDLSSGQCPCLPNVQGLSCDRCAPNFWNFTSGRGCQPCAC 1099
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ + +P C+ GQC C G C
Sbjct: 1100 HLTRA--RSPTCNEFTGQCNCHAGFGGRSC 1127
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 98/253 (38%), Gaps = 60/253 (23%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ G C C YY G C AC C+P G+L+ C + G+C C+ G
Sbjct: 800 HGGQC-RCKPGVVGRRCNICATGYY-GFGPAGCQACQCSPEGALSGLCEGTTGQCPCRTG 857
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CD C + F C+ C CN + CD+ G C + + + G H E
Sbjct: 858 AFGLRCDHCQRGQWGF--PNCRPCICN-----GHADECDTHTGICLNCRDHTGGE-HCER 909
Query: 141 RV------------------------QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
+ +S++NF + C RD Y
Sbjct: 910 CIAGFYGDPQLPYGGQCRPCPCPEGPESQRNFATS---------CHRDGY---------- 950
Query: 177 QCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQ 233
+ + C C+ G TG +CD C H+ D G C CEC+ + CD GQ
Sbjct: 951 --SQQIVCHCRSGYTGLRCDTCAPGHFGDPSRPGGRCLPCECSGNIDPMDPDACDPRTGQ 1008
Query: 234 C-ECKDNVEGAQC 245
C C + EG C
Sbjct: 1009 CLRCLYHTEGPHC 1021
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C G G C C H+ C++C+C+P G +TP C G C C+ V
Sbjct: 1114 GQCNCHAGFGGRSCSECQELHWGDPGLQCRACDCDPRG--IDTPQCHRSTGHCSCRPGVS 1171
Query: 242 GAQC 245
G +C
Sbjct: 1172 GVRC 1175
>gi|156400068|ref|XP_001638822.1| predicted protein [Nematostella vectensis]
gi|156225946|gb|EDO46759.1| predicted protein [Nematostella vectensis]
Length = 906
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 108/248 (43%), Gaps = 47/248 (18%)
Query: 1 CNCNGFSNRCFFDKEL----YNRT-GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCT 55
C CN + C+++ L +RT G GG C++C + G C CRD+++++ G +
Sbjct: 532 CECNNHATACYYNSSLDPSPASRTVGGGGVCINCLHNTAGQFCHVCRDDFFREPGKSLSA 591
Query: 56 ACNCNP---------IGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
C+P G + S G C CK V C +C +++ + GC++
Sbjct: 592 VDVCSPCQCTGPGVETGKTSCARVSSGNCTCKKYVREPTCGQCMKGYFNLSSSNPEGCQA 651
Query: 104 CECNPAGSV--KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
C CNP G++ TP G+ E + S G+ VQ + W+
Sbjct: 652 CNCNPKGTLGGDRTP-----AGELECS--GSNGKCACLTNVQGLRCDKCVSAYYWN---- 700
Query: 162 KRDTYPLGHG---------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG-CK 211
P G+G GSL CNS G CQCKP + G +CDRC Y G G CK
Sbjct: 701 -----PSGYGCSPCNCDASGSLATNCNSTGYCQCKPNIGGRRCDRCMPGSY--GSPGSCK 753
Query: 212 SCECNPAG 219
C CN AG
Sbjct: 754 PCNCNVAG 761
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSV--KNTP----NCDSV 230
S G C CK V C +C +++ + GC++C CNP G++ TP C
Sbjct: 616 SSGNCTCKKYVREPTCGQCMKGYFNLSSSNPEGCQACNCNPKGTLGGDRTPAGELECSGS 675
Query: 231 KGQCECKDNVEGAQC 245
G+C C NV+G +C
Sbjct: 676 NGKCACLTNVQGLRC 690
>gi|260797158|ref|XP_002593571.1| hypothetical protein BRAFLDRAFT_88482 [Branchiostoma floridae]
gi|229278796|gb|EEN49582.1| hypothetical protein BRAFLDRAFT_88482 [Branchiostoma floridae]
Length = 1323
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 1 CNCNGFSNRCFFDKELY--------NRTGHGG-HCLDCQGDRDGPNCEKCRDNYYQ---- 47
CNCN S C +++ + N + HGG CL C+ + G NCE+C +Y+
Sbjct: 793 CNCNNHSQVCVYNETVAAGNLSMSANGSFHGGGVCLSCRDNTTGTNCEQCDTLFYRNPEV 852
Query: 48 -KSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C C C+ +GS + QCN E G+C CKPGV G CD C +Y+F GC C
Sbjct: 853 SHQSSSACLPCECDLVGSSSSQCNMETGQCPCKPGVGGRMCDVCLPGYYNFSSGGCTPCP 912
Query: 106 CNPAGSVKNTP 116
C P + +TP
Sbjct: 913 CYPL--LHHTP 921
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 21/123 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+C+G S++C N TG C+ C G+ G NC++C D ++ + C+AC C+
Sbjct: 963 CDCSGNSDQC------SNVTGE---CIGCHGNTTGFNCDRCADGFFGDAVFGNCSACACD 1013
Query: 61 PIGSLNLQCN-SEGRCQCKPGV--TGDKCDRCDVNHYDF---------GEAGCKSCECNP 108
GS+ L CN + G C CKPGV + +C RC NHY F + GC C C+
Sbjct: 1014 EAGSVALVCNHTTGLCPCKPGVDSSTRRCSRCMENHYGFDTPDGDGTDSQPGCSPCNCDV 1073
Query: 109 AGS 111
GS
Sbjct: 1074 LGS 1076
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 38 CEKCRDNYY---QKSGDNF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC 89
C +C +N+Y GD C+ CNC+ +GS +LQC G C C PGV G KCD C
Sbjct: 1042 CSRCMENHYGFDTPDGDGTDSQPGCSPCNCDVLGSTSLQCGEGGNCSCHPGVEGTKCDVC 1101
Query: 90 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
Y + C +C+C+P G++ + Q Q + G T+
Sbjct: 1102 MEGTYGLPDMECLACDCDPVGTLSDFDPFLPTTTQSAVGQTTILGLTTTQ 1151
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQ-CKPGVT 82
+C G CE+C D Y+ GD C C+C+ G+ + N G C C T
Sbjct: 933 NCTQGHKGEQCERCEDFYW---GDPVHGTACAECDCS--GNSDQCSNVTGECIGCHGNTT 987
Query: 83 GDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G CDRC + D C +C C+ AGSV C+ G C + V + R
Sbjct: 988 GFNCDRCADGFFGDAVFGNCSACACDEAGSVALV--CNHTTGLCPC-----KPGVDSSTR 1040
Query: 142 -----VQSRKNFD-PAGNRIWDLRRCKR---DTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
+++ FD P G+ C D GS +LQC G C C PGV G
Sbjct: 1041 RCSRCMENHYGFDTPDGDGTDSQPGCSPCNCDVL-----GSTSLQCGEGGNCSCHPGVEG 1095
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
KCD C Y + C +C+C+P G++ +
Sbjct: 1096 TKCDVCMEGTYGLPDMECLACDCDPVGTLSD 1126
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 94/243 (38%), Gaps = 54/243 (22%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN---LQCNSEGRCQCKPGVTGDK 85
C+ G C+ C YY S CT C C P+ + + C C G G++
Sbjct: 884 CKPGVGGRMCDVCLPGYYNFSSGG-CTPCPCYPLLHHTPCYVDQGGQVTCNCTQGHKGEQ 942
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
C+RC+ ++ G EC+ +G N+ C +V G+C ++ G
Sbjct: 943 CERCEDFYWGDPVHGTACAECDCSG---NSDQCSNVTGECIGCHGNTTG----------- 988
Query: 146 KNFDPAGNRIWDLRRCKRDTY---PLG--------HGGSLNLQCN-SEGRCQCKPGV--T 191
++ RC + G GS+ L CN + G C CKPGV +
Sbjct: 989 ----------FNCDRCADGFFGDAVFGNCSACACDEAGSVALVCNHTTGLCPCKPGVDSS 1038
Query: 192 GDKCDRCDVNHYDF---------GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+C RC NHY F + GC C C+ GS + C G C C VEG
Sbjct: 1039 TRRCSRCMENHYGFDTPDGDGTDSQPGCSPCNCDVLGS--TSLQCGE-GGNCSCHPGVEG 1095
Query: 243 AQC 245
+C
Sbjct: 1096 TKC 1098
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 107/272 (39%), Gaps = 48/272 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY--YQKSGDNFCTACN 58
C CNG C + G + C G+ GP CE+C+ Y + C ACN
Sbjct: 741 CECNGLGIGCEISAD------SGQYECICSGNTQGPFCEECQPLYNQFPYQPGQPCQACN 794
Query: 59 CN----------PIGSLNLQCNSEGR-------CQCKPGVTGDKCDRCDVNHYDFGE--- 98
CN + + NL ++ G C+ TG C++CD Y E
Sbjct: 795 CNNHSQVCVYNETVAAGNLSMSANGSFHGGGVCLSCRDNTTGTNCEQCDTLFYRNPEVSH 854
Query: 99 ---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
+ C CEC+ GS ++ C+ GQC + GR+ ++ + NF G
Sbjct: 855 QSSSACLPCECDLVGS--SSSQCNMETGQCP-CKPGVGGRM-CDVCLPGYYNFSSGG--- 907
Query: 156 WDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
C YPL H + + C C G G++C+RC+ ++ G E
Sbjct: 908 -----CTPCPCYPLLHHTPCYVDQGGQVTCNCTQGHKGEQCERCEDFYWGDPVHGTACAE 962
Query: 215 CNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQC 245
C+ +G N+ C +V G+C C N G C
Sbjct: 963 CDCSG---NSDQCSNVTGECIGCHGNTTGFNC 991
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.479
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,404,097,826
Number of Sequences: 23463169
Number of extensions: 191629262
Number of successful extensions: 525673
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1719
Number of HSP's successfully gapped in prelim test: 8281
Number of HSP's that attempted gapping in prelim test: 366722
Number of HSP's gapped (non-prelim): 79474
length of query: 247
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 108
effective length of database: 9,097,814,876
effective search space: 982564006608
effective search space used: 982564006608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)