BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15472
(247 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P15215|LAMC1_DROME Laminin subunit gamma-1 OS=Drosophila melanogaster GN=LanB2 PE=2
SV=2
Length = 1639
Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG +++CFFD L+NRTGHGGHCLDC+ +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 359 CNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRD-DGYCVNCACD 417
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 418 PVGSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDT 477
Query: 121 VKGQC 125
G C
Sbjct: 478 ETGIC 482
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 57/74 (77%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 420 GSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDTET 479
Query: 232 GQCECKDNVEGAQC 245
G C CK+NVEG +C
Sbjct: 480 GICFCKENVEGRRC 493
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G +C +C+ Y+ N C C C+P+GS N C+ G+C C+PGV G +CD
Sbjct: 928 CKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCD 987
Query: 88 RCDVNHYDFGEAGCKSCECNPAGS 111
+C+ Y F GCK CEC+ +GS
Sbjct: 988 QCENYFYGFSSEGCKPCECDESGS 1011
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 105/255 (41%), Gaps = 67/255 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--------NFCTACNCNPIGSLNLQCNSEGRC-- 75
C +C G CE+C D ++ GD C +C+CN N+ N+ G C
Sbjct: 811 CTECPKGYFGSRCEQCSDGFF---GDPTGLLGEVQTCKSCDCNG----NVDPNAVGNCNR 863
Query: 76 ------QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVK 122
+C G+ CD+C H+ C C C AG+ ++ CD V
Sbjct: 864 TTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVT 923
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------- 171
GQC+ + + GR D C+ + + G
Sbjct: 924 GQCQ-CKPNVIGR---------------------DCGECQPGYFNIRSGNGCENCLCDPV 961
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS N C+ G+C C+PGV G +CD+C+ Y F GCK CEC+ +GS CD
Sbjct: 962 GSYNSTCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSEGCKPCECDESGS--KGFQCDQ- 1018
Query: 231 KGQCECKDNVEGAQC 245
GQC C DNVEG +C
Sbjct: 1019 NGQCPCNDNVEGRRC 1033
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 42/205 (20%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN----- 66
NRT G CL C + G +C++C ++ GD C C+C G+
Sbjct: 862 NRTT--GECLKCIHNTAGEHCDQCLSGHF---GDPLALPHGRCDRCSCYEAGTEQDEQSI 916
Query: 67 LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQ 124
+C+ G+CQCKP V G C C +++ GC++C C+P GS +T CD GQ
Sbjct: 917 TRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST--CDRYSGQ 974
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-----RRCKRDTYPLGHGGSLNLQCN 179
C H V ++ D N + + C+ D GS QC+
Sbjct: 975 C-----------HCRPGVMGQR-CDQCENYFYGFSSEGCKPCECD-----ESGSKGFQCD 1017
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYD 204
G+C C V G +CDRC N YD
Sbjct: 1018 QNGQCPCNDNVEGRRCDRCKENKYD 1042
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 112/261 (42%), Gaps = 34/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C+C+G ++ C D E G C+ CQ + G NC++C +Y + N C C
Sbjct: 744 CDCHGHADIC--DSET-------GRCI-CQHNTHGDNCDQCAKGFYGNALGGTPNDCKRC 793
Query: 58 NCNPIGSLNLQCNSEGRC--QCKPGVTGDKCDRCDVNHYD-----FGEA-GCKSCECNPA 109
C P LQ N + +C G G +C++C + GE CKSC+CN
Sbjct: 794 PC-PNDGACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTGLLGEVQTCKSCDCNGN 852
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
NC+ G+C ++ G H + + S DP RC R Y
Sbjct: 853 VDPNAVGNCNRTTGECLKCIHNTAGE-HCD-QCLSGHFGDPLA---LPHGRCDRCSCYEA 907
Query: 169 GH---GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G S+ G+CQCKP V G C C +++ GC++C C+P GS +T
Sbjct: 908 GTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST 967
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQC C+ V G +C
Sbjct: 968 --CDRYSGQCHCRPGVMGQRC 986
Score = 37.7 bits (86), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 91/236 (38%), Gaps = 41/236 (17%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE C Y G F C C+C+ + C+SE GRC C+ GD CD+C
Sbjct: 718 GQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADI---CDSETGRCICQHNTHGDNCDQC 774
Query: 90 DVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
Y G CK C C G+ + +C SR Q
Sbjct: 775 AKGFYGNALGGTPNDCKRCPCPNDGACLQINEDTVICTECPKGYFGSRCE-------QCS 827
Query: 146 KNF--DPAGNRIWDLRRCKR-----DTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKCD 196
F DP G + +++ CK + P G CN + G C +C G+ CD
Sbjct: 828 DGFFGDPTG-LLGEVQTCKSCDCNGNVDPNAVGN-----CNRTTGECLKCIHNTAGEHCD 881
Query: 197 RCDVNHY----DFGEAGCKSCECNPAGSVKN---TPNCDSVKGQCECKDNVEGAQC 245
+C H+ C C C AG+ ++ CD V GQC+CK NV G C
Sbjct: 882 QCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDC 937
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 63/248 (25%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL--DCQGDRDGPNCEKCRDNY----YQKSGD--- 51
C CNG +++C + HG L +C+ + DGP+C++C Y +++S
Sbjct: 299 CKCNGHASKCVPSTGM-----HGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEV 353
Query: 52 NFCTACNCNPIG-------SLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
N C ACNCN + +L + G C C+ G C+RC N Y + C +
Sbjct: 354 NECKACNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRDDGYCVN 413
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C C+P GS S Q +S G+ + V K RC
Sbjct: 414 CACDPVGS--------------RSLQCNSHGKCQCKPGVTGDK-----------CDRCDN 448
Query: 164 DTYPLG----------HGGSL--NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE--- 207
+ Y G GGS C++E G C CK V G +C+ C ++ +
Sbjct: 449 NYYQFGPHGCQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNR 508
Query: 208 AGCKSCEC 215
GC C C
Sbjct: 509 FGCTPCFC 516
>sp|A0JP86|LAMC1_XENTR Laminin subunit gamma-1 OS=Xenopus tropicalis GN=lamc1 PE=2 SV=1
Length = 1592
Score = 147 bits (371), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 87/125 (69%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S C+FD ELY TGHGGHC C + DGPNCE+CR+NYY++ + C AC CN
Sbjct: 325 CNCNGRSQECYFDPELYRSTGHGGHCTGCADNTDGPNCERCRENYYRQDNNEPCHACQCN 384
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC++ GRC CKPGV G+KCDRC + EAGC+ C CNPAGS T C+
Sbjct: 385 PVGSLSTQCDNYGRCSCKPGVMGEKCDRCQPGFHSLTEAGCRPCACNPAGS---TDECNV 441
Query: 121 VKGQC 125
G+C
Sbjct: 442 ETGRC 446
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC++ GRC CKPGV G+KCDRC + EAGC+ C CNPAGS T C+
Sbjct: 387 GSLSTQCDNYGRCSCKPGVMGEKCDRCQPGFHSLTEAGCRPCACNPAGS---TDECNVET 443
Query: 232 GQCECKDNVEGAQC 245
G+C CKDNVEG C
Sbjct: 444 GRCSCKDNVEGFNC 457
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 108/241 (44%), Gaps = 41/241 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ + C C C S N+ N+ G C
Sbjct: 775 CTNCPLGTTGKRCELCDDGYFGDPLGENGAPRPCRICEC----SNNIDPNAVGNCDRLTG 830
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCE- 126
+C G CDRC Y A C++C CNP G+VK C+ V GQCE
Sbjct: 831 ECLKCIYNTGGFYCDRCRDGFYGNPLAQNPDLKCRACSCNPYGTVKGQSGCNQVTGQCEC 890
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRC 184
++ R E P + R C+R D + LG S + QC+ G+C
Sbjct: 891 LPHVTERDCSACE----------PGFYNLLSGRGCERCDCHSLG---STSGQCDVRTGQC 937
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+C PG++G +C +C+ NH+ FG GCK C+C+P GS + C G+CECK G +
Sbjct: 938 ECHPGISGQQCQQCEPNHFGFGPEGCKPCDCDPEGS--GSLQCKE-DGRCECKSGFVGTR 994
Query: 245 C 245
C
Sbjct: 995 C 995
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 97/207 (46%), Gaps = 39/207 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++CRD +Y ++ D C AC+CNP G++ Q CN G+C+
Sbjct: 830 GECLKCIYNTGGFYCDRCRDGFYGNPLAQNPDLKCRACSCNPYGTVKGQSGCNQVTGQCE 889
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VT C C+ Y+ GC+ C+C+ GS CD GQCE
Sbjct: 890 CLPHVTERDCSACEPGFYNLLSGRGCERCDCHSLGSTSG--QCDVRTGQCE--------- 938
Query: 136 VHTELRVQS-------RKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCK 187
H + Q F P G CK D P G G +LQC +GRC+CK
Sbjct: 939 CHPGISGQQCQQCEPNHFGFGPEG--------CKPCDCDPEGSG---SLQCKEDGRCECK 987
Query: 188 PGVTGDKCDRCDVNH-YDFGEAGCKSC 213
G G +CD+C+ N+ Y+ GC+ C
Sbjct: 988 SGFVGTRCDQCEENYFYNRSGPGCQEC 1014
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 112/260 (43%), Gaps = 31/260 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S+ C D E G C DCQ + GP+CE+C + YY S + C C
Sbjct: 707 CTCNGHSDTC--DPE-------SGVC-DCQHNTAGPHCERCSEGYYGDSTTGSASDCQPC 756
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ GE G C+ CEC+
Sbjct: 757 PC-PGGSSCAVVPRTKEVVCTNCPLGTTGKRCELCDDGYFGDPLGENGAPRPCRICECSN 815
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NCD + G+C ++ G R N A N R C + Y
Sbjct: 816 NIDPNAVGNCDRLTGECLKCIYNTGGFYCDRCRDGFYGN-PLAQNPDLKCRACSCNPYGT 874
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPN 226
G S CN G+C+C P VT C C+ Y+ GC+ C+C+ GS
Sbjct: 875 VKGQS---GCNQVTGQCECLPHVTERDCSACEPGFYNLLSGRGCERCDCHSLGSTSG--Q 929
Query: 227 CDSVKGQCECKDNVEGAQCR 246
CD GQCEC + G QC+
Sbjct: 930 CDVRTGQCECHPGISGQQCQ 949
>sp|Q1LVF0|LAMC1_DANRE Laminin subunit gamma-1 OS=Danio rerio GN=lamc1 PE=2 SV=2
Length = 1593
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S C+FD ELY TGHGGHC +C + DGP CE+C NYY+++ C +C CN
Sbjct: 326 CNCNGKSAECYFDPELYRATGHGGHCRNCADNTDGPKCERCLANYYREASGQRCLSCGCN 385
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC++ GRC CKPGV GDKCDRC ++ EAGC+ C CNPAGS T CD
Sbjct: 386 PVGSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHSLSEAGCRPCSCNPAGS---TQECDV 442
Query: 121 VKGQCE 126
G+C+
Sbjct: 443 QTGRCQ 448
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC++ GRC CKPGV GDKCDRC ++ EAGC+ C CNPAGS T CD
Sbjct: 388 GSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHSLSEAGCRPCSCNPAGS---TQECDVQT 444
Query: 232 GQCECKDNVEGAQC 245
G+C+CK+NV+G C
Sbjct: 445 GRCQCKENVDGFNC 458
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 77/179 (43%), Gaps = 64/179 (35%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYD 95
+C C +Y C CNCNPIGS N QC+ G+C+C+PGVTG C+RC+VN +
Sbjct: 899 DCGACELGFYNLQSGKGCERCNCNPIGSTNGQCDIVSGQCECQPGVTGQHCERCEVNFFG 958
Query: 96 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
F +GCK C+C+P GS ESAQ
Sbjct: 959 FSSSGCKPCDCDPEGS--------------ESAQ-------------------------- 978
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH-YDFGEAGCKSC 213
CK D GRC C+PG G +CD C+ N+ Y+ GC+ C
Sbjct: 979 -----CKED-----------------GRCHCRPGFVGSRCDMCEENYFYNRSTPGCQQC 1015
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 104/250 (41%), Gaps = 59/250 (23%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D ++ +K C AC+CN N+ N+ G C
Sbjct: 776 CTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNN----NIDPNAVGNCNRESG 831
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC Y A CK C+C+P G+V C V GQC
Sbjct: 832 ECLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQTACSQVTGQCPC 891
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNL 176
NR D C+ Y L G GS N
Sbjct: 892 --------------------LPHVINR--DCGACELGFYNLQSGKGCERCNCNPIGSTNG 929
Query: 177 QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
QC+ G+C+C+PGVTG C+RC+VN + F +GCK C+C+P GS + C G+C
Sbjct: 930 QCDIVSGQCECQPGVTGQHCERCEVNFFGFSSSGCKPCDCDPEGS--ESAQCKE-DGRCH 986
Query: 236 CKDNVEGAQC 245
C+ G++C
Sbjct: 987 CRPGFVGSRC 996
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 113/261 (43%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
CNCNG S+ C D E G C +CQ + G +CE+C+D +Y S + C AC
Sbjct: 708 CNCNGHSDTC--DPET-------GMC-NCQHNTAGLSCERCKDGFYGDSTVGSSSDCKAC 757
Query: 58 NCNPIG---SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P G ++ + N C G TG +C+ CD + GE G C++C CN
Sbjct: 758 PC-PAGATCAVVPKTNEVVCTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNN 816
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ G+C ++ G V + Q A N + CK Y
Sbjct: 817 NIDPNAVGNCNRESGECLKCIYNTAG-VFCDRCKQGFYGDARAANVADKCKPCKCSPY-- 873
Query: 169 GHGGSLNLQC---NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G+++ Q G+C C P V C C++ Y+ GC+ C CNP GS
Sbjct: 874 ---GTVDRQTACSQVTGQCPCLPHVINRDCGACELGFYNLQSGKGCERCNCNPIGSTNG- 929
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD V GQCEC+ V G C
Sbjct: 930 -QCDIVSGQCECQPGVTGQHC 949
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C +CQ G +CE+C N++ S C C+C+P GS + QC +GRC C+PG G
Sbjct: 936 GQC-ECQPGVTGQHCERCEVNFFGFSSSG-CKPCDCDPEGSESAQCKEDGRCHCRPGFVG 993
Query: 84 DKCDRCDVNH-YDFGEAGCKSC 104
+CD C+ N+ Y+ GC+ C
Sbjct: 994 SRCDMCEENYFYNRSTPGCQQC 1015
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 88/249 (35%), Gaps = 68/249 (27%)
Query: 35 GPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDR 88
G +CE+C D +++S C CNCN C+ E G C C+ G C+R
Sbjct: 682 GQHCEQC-DQGFRRSRPELRRFSTCERCNCNGHSD---TCDPETGMCNCQHNTAGLSCER 737
Query: 89 CDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
C Y G CK+C C + P + V C + + G
Sbjct: 738 CKDGFYGDSTVGSSSDCKACPCPAGATCAVVPKTNEV--VCTNCPTGTTG---------- 785
Query: 145 RKNFDPAGNRIWDLRRCKR--DTY---PLGHGGSL----------NLQCNSEGRC----- 184
+RC+ D + PLG G + N+ N+ G C
Sbjct: 786 --------------KRCELCDDGFFGDPLGEKGPVRACRACSCNNNIDPNAVGNCNRESG 831
Query: 185 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCEC 236
+C G CDRC Y A CK C+C+P G+V C V GQC C
Sbjct: 832 ECLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQTACSQVTGQCPC 891
Query: 237 KDNVEGAQC 245
+V C
Sbjct: 892 LPHVINRDC 900
>sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditis elegans GN=lam-2 PE=1
SV=3
Length = 1633
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 88/116 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ SNRC+FD++L+ TGHGGHC+DCQG+ G +CE+C N++++ G+N+C AC CN
Sbjct: 347 CNCSQLSNRCYFDQQLFEETGHGGHCIDCQGNTQGVHCEQCIANHWRRPGENYCVACGCN 406
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
IGSL+ QC++EG+CQCKPGVTG CD+C YDF GCK+C C +GS+ N P
Sbjct: 407 EIGSLSTQCDNEGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKNCGCETSGSLNNQP 462
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GSL+ QC++EG+CQCKPGVTG CD+C YDF GCK+C C +GS+ N P CDS
Sbjct: 409 GSLSTQCDNEGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKNCGCETSGSLNNQPRCDSSS 468
Query: 232 GQCECKDNVEGAQC 245
G C CK NVEG QC
Sbjct: 469 GSCSCKLNVEGRQC 482
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C DC + G C++C +Y + C CNC+P+GS C+ + G+CQCKPGVT
Sbjct: 914 GQC-DCLPNVIGIQCDQCAHGFYNITSGLGCQECNCDPLGSEGNTCDVNTGQCQCKPGVT 972
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +CDRC H+ F GC+ C+C GS CD GQC
Sbjct: 973 GQRCDRCADYHFGFSANGCQPCDCEYIGS--ENQQCDVNSGQC 1013
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKPGVTG +CDRC H+ F GC+ C+C GS CD GQC CK+NVE
Sbjct: 963 GQCQCKPGVTGQRCDRCADYHFGFSANGCQPCDCEYIGS--ENQQCDVNSGQCLCKENVE 1020
Query: 242 GAQC 245
G +C
Sbjct: 1021 GRRC 1024
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 90/220 (40%), Gaps = 60/220 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLN-------LQCN 70
G C C + G NCE C+ Y+ GD C +C C G+ L+CN
Sbjct: 854 GECKKCIFNTHGFNCENCKPGYW---GDALIEPKGNCQSCGCFAAGTRRPNNDYTLLECN 910
Query: 71 SE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
+ G+C C P V G +CD+C Y+ GC+ C C+P GS NT CD GQC+
Sbjct: 911 QQDGQCDCLPNVIGIQCDQCAHGFYNITSGLGCQECNCDPLGSEGNT--CDVNTGQCQCK 968
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLG------------HGGSLN 175
+ +RC R Y G + GS N
Sbjct: 969 PGVTG-------------------------QRCDRCADYHFGFSANGCQPCDCEYIGSEN 1003
Query: 176 LQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
QC+ + G+C CK V G +CD+C N Y + GC C+
Sbjct: 1004 QQCDVNSGQCLCKENVEGRRCDQCAENRYGITQ-GCLPCD 1042
>sp|P11047|LAMC1_HUMAN Laminin subunit gamma-1 OS=Homo sapiens GN=LAMC1 PE=1 SV=3
Length = 1609
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 84/112 (75%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C++C+C+
Sbjct: 342 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSSCHCS 401
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+
Sbjct: 402 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI 453
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 381 RCRENFFRLGNNEACSSCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 440
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 441 GCRPCSCDPSGSID---ECNIETGRCVCKDNVEGFNC 474
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 111/240 (46%), Gaps = 39/240 (16%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C +C G CE C D Y+ G N C C C S N+ N+ G C
Sbjct: 792 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQC----SDNIDPNAVGNCNRLTG 847
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CN G++K +C+ V GQCE
Sbjct: 848 ECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCEC 907
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQ 185
+ Q DP + + C+R D + LG S N QC+ G+C+
Sbjct: 908 L---------PHVTGQDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQCE 955
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PG+TG C+RC+VNH+ FG GCK C+C+P GS+ D G+CEC++ G +C
Sbjct: 956 CQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD---GRCECREGFVGNRC 1012
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCN G++ Q CN G+C+
Sbjct: 847 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCE 906
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 907 CLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 963
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 964 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1011
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1012 CDQCEENYFYNRSWPGCQEC 1031
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 112/261 (42%), Gaps = 35/261 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S + C C
Sbjct: 724 CACNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 773
Query: 58 NCNPIGS--LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+C+
Sbjct: 774 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSD 832
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ + G+C ++ G + N A N + C + Y
Sbjct: 833 NIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGN-PLAPNPADKCKACNCNLY-- 889
Query: 169 GHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G++ Q CN G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 890 ---GTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNG- 945
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 946 -QCDIRTGQCECQPGITGQHC 965
>sp|P02468|LAMC1_MOUSE Laminin subunit gamma-1 OS=Mus musculus GN=Lamc1 PE=1 SV=2
Length = 1607
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG CE+CR+N+++ C+ C+C+
Sbjct: 340 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCS 399
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+ GS T C+
Sbjct: 400 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDLRGS---TDECNV 456
Query: 121 VKGQC 125
G+C
Sbjct: 457 ETGRC 461
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C++ ++ + + C AC CNP G++ Q CN G+CQ
Sbjct: 845 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQ 904
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V+G C CD +Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 905 CLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 961
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D H GSL+LQC +GRC+C+ G G++C
Sbjct: 962 -HCERCETNHFGFGPEGCKPCDCH----------HEGSLSLQCKDDGRCECREGFVGNRC 1010
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 1011 DQCEENYFYNRSWPGCQEC 1029
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNLQCNSEGRC----- 75
C C G CE C D Y+ G N C C CN N+ N+ G C
Sbjct: 790 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND----NIDPNAVGNCNRLTG 845
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C G CDRC + A CK+C CNP G+V+ +C+ V GQC+
Sbjct: 846 ECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQC 905
Query: 128 AQLSSRGRVHTELRVQSRK--NFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
V R DP + + C+R D + LG S N QC+ G+
Sbjct: 906 LP-----------HVSGRDCGTCDPGYYNLQSGQGCERCDCHALG---STNGQCDIRTGQ 951
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C+C+PG+TG C+RC+ NH+ FG GCK C+C+ GS+ D G+CEC++ G
Sbjct: 952 CECQPGITGQHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDD---GRCECREGFVGN 1008
Query: 244 QC 245
+C
Sbjct: 1009 RC 1010
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 56/97 (57%), Gaps = 14/97 (14%)
Query: 160 RCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC + EA
Sbjct: 379 RCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEA 438
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+ GS T C+ G+C CKDNVEG C
Sbjct: 439 GCRPCSCDLRGS---TDECNVETGRCVCKDNVEGFNC 472
>sp|Q9R0B6|LAMC3_MOUSE Laminin subunit gamma-3 OS=Mus musculus GN=Lamc3 PE=2 SV=2
Length = 1581
Score = 127 bits (318), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+ELY TGHGGHC C+ GP+CE+C NYY+ S C C+C+
Sbjct: 336 CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDCH 395
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 396 PAGSLSLQCDNSGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCACNVAGSLG---TCDP 452
Query: 121 VKGQC 125
G C
Sbjct: 453 RSGNC 457
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQ-CNS-EGRC 75
H GHCL C + G +CE CR+ +Y + + C C+C+ GS++ + CN G+C
Sbjct: 839 HSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEKTCNPVTGQC 898
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V+G C RC YD GC+SC+C+P GS++N C GQC
Sbjct: 899 VCLPYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPC------- 949
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
R + R G I R C+ PLG S QC+ C C+PG G K
Sbjct: 950 RPGVTGQACDRCQLGFFGFSIKGCRDCR--CSPLGAASS---QCHENSTCVCRPGFVGYK 1004
Query: 195 CDRCDVNHYDF-GEAGCKSC 213
CDRC N + G+ GC+ C
Sbjct: 1005 CDRCQDNFFLADGDTGCQEC 1024
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 397 AGSLSLQCDNSGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCACNVAGSLG---TCDPR 453
Query: 231 KGQCECKDNVEGAQC 245
G C CK+NVEG+ C
Sbjct: 454 SGNCPCKENVEGSLC 468
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 96/253 (37%), Gaps = 66/253 (26%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF--------CTACNCNPIGSLNLQCNSEGRC-- 75
C C + G CE C D ++ GD C C C S N+ N+ G C
Sbjct: 786 CTHCPPGQRGRRCESCEDGFF---GDPLGLSGAPQPCRRCQC----SGNVDLNAVGNCDP 838
Query: 76 ------QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQ 124
+C TG C+ C Y A C C C+ GSV C+ V GQ
Sbjct: 839 HSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEK-TCNPVTGQ 897
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-----------GS 173
C S GR D RC Y L G GS
Sbjct: 898 CVCLPYVS-GR---------------------DCSRCSPGFYDLQSGRGCQSCKCHPLGS 935
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
L +C+ + G+C C+PGVTG CDRC + + F GC+ C C+P G+ + + +S
Sbjct: 936 LENKCHPKTGQCPCRPGVTGQACDRCQLGFFGFSIKGCRDCRCSPLGAASSQCHENST-- 993
Query: 233 QCECKDNVEGAQC 245
C C+ G +C
Sbjct: 994 -CVCRPGFVGYKC 1005
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------CTACNCNPIGSLNLQCNSEGRC-- 75
G CL C +GP+CE+C +Y G+ F C C C P S G
Sbjct: 732 GICL-CGHHTEGPSCERCMPGFY---GNAFSGRADDCQPCPC-PGQSACATIPESGDVVC 786
Query: 76 -QCKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
C PG G +C+ C+ + G +G C+ C+C+ + NCD G C
Sbjct: 787 THCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVGNCDPHSGHCLRC 846
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
++ G H E R+ F + + +C + L G CN G+C C
Sbjct: 847 LYNTTG-AHCE---HCREGFYGSAVATRPVDKCAPCSCDL-RGSVSEKTCNPVTGQCVCL 901
Query: 188 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P V+G C RC YD GC+SC+C+P GS++N C GQC C+ V G C
Sbjct: 902 PYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPCRPGVTGQAC 958
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 182 GRCQ-CKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G CQ C+ TG C+RC+ N+Y + + C+ C+C+PAGS+ + CD+ G C CK
Sbjct: 359 GHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDCHPAGSL--SLQCDN-SGVCPCKPT 415
Query: 240 VEGAQC 245
V G +C
Sbjct: 416 VTGWKC 421
>sp|Q9Y6N6|LAMC3_HUMAN Laminin subunit gamma-3 OS=Homo sapiens GN=LAMC3 PE=1 SV=3
Length = 1575
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCQ 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 388 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLD---TCDPR 444
Query: 231 KGQCECKDNVEGAQC 245
G+C CK+NVEG C
Sbjct: 445 SGRCPCKENVEGNLC 459
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 101/242 (41%), Gaps = 43/242 (17%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSEGRC----- 75
C C + G CE C D ++ F C C C S N+ N+ G C
Sbjct: 774 CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQC----SGNVDPNAVGNCDPLSG 829
Query: 76 ---QCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCES 127
+C TGD C+ C Y A C C C+P GSV CD V GQC
Sbjct: 830 HCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSC 889
Query: 128 AQLSSRGRVHTELRVQSR---KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
H R SR FD R R CK +PLG S QC+ + G+
Sbjct: 890 LP-------HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQ 935
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C C+PGVTG CDRC + + F GC++C C+P G+ + C G C C+ EG
Sbjct: 936 CTCRPGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCVCRPGFEGY 992
Query: 244 QC 245
+C
Sbjct: 993 KC 994
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCN---SEGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q G+C
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 887
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC + R
Sbjct: 888 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQC-----TCRP 940
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
V + + + F G I R C+ PLG + QC+ G C C+PG G K
Sbjct: 941 GVTGQACDRCQLGF--FGFSIKGCRACR--CSPLGAASA---QCHENGTCVCRPGFEGYK 993
Query: 195 CDRCDVNHY 203
CDRC N +
Sbjct: 994 CDRCHDNFF 1002
>sp|Q8HZI9|LAMC2_HORSE Laminin subunit gamma-2 OS=Equus caballus GN=LAMC2 PE=2 SV=1
Length = 1190
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 78/118 (66%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CE+C+ +Y++ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELHKQTGNGFRCLNCNDNTDGIHCERCKAGFYRQRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGDRCDRCLPGFHTLTDAGCAQDQRLLDSKCDCDPAG 145
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGDRCDRCLPGFHTLTDAGCAQDQRLLDSKCDCDPAGI--- 146
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CDS G+C CK V G +C
Sbjct: 147 SGPCDS--GRCVCKPAVTGERC 166
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G +C++C+ YY GD C ACNCNP+GS ++C S+G C
Sbjct: 537 GRCLKCIHNTAGVHCDQCKAGYY---GDPLAPNPADKCRACNCNPVGSEPVECRSDGSCV 593
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G C+ +
Sbjct: 594 CKPGFGGLSCEHAALT 609
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRPGYYHLDGGNPQGCTQCFC 189
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGRC--QCKPG 80
G C + D P C C +Y D C C C S ++ +E C G
Sbjct: 429 GDCYSGDENPDIPECADCPIGFYNDPQDPRSCKPCPCRNGFSCSVMPETEEVVCNNCPQG 488
Query: 81 VTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
VTG +C+ C ++ FGE G C+ C+CN + NCD + G+C ++ G
Sbjct: 489 VTGARCELCADGYFGDPFGERGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIHNTAG 548
Query: 135 RVHTELRVQSRKNF--DPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVT 191
VH + Q + + DP D +C+ + P+G S ++C S+G C CKPG
Sbjct: 549 -VHCD---QCKAGYYGDPLAPNPAD--KCRACNCNPVG---SEPVECRSDGSCVCKPGFG 599
Query: 192 GDKCDRCDVN 201
G C+ +
Sbjct: 600 GLSCEHAALT 609
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C GVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 485 CPQGVTGARCELCADGYFGDPFGERGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 544
Query: 239 NVEGAQC 245
N G C
Sbjct: 545 NTAGVHC 551
>sp|Q13753|LAMC2_HUMAN Laminin subunit gamma-2 OS=Homo sapiens GN=LAMC2 PE=1 SV=2
Length = 1193
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAG 110
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--------CECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD+ G+C CK V G +C
Sbjct: 149 --PCDA--GRCVCKPAVTGERC 166
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNCNP+GS + C S+G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCKAGYF---GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCV 592
Query: 77 CKPGVTGDKCD 87
CKPG G C+
Sbjct: 593 CKPGFGGPNCE 603
Score = 37.4 bits (85), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
GRC CKP VTG++CDRC +Y+ GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIH 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGIYC 550
Score = 34.3 bits (77), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 77 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKC-- 541
Query: 131 SSRGRVHTELRV---QSRKNF--DPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRC 184
+H + Q + + DP D +C+ + P+G S + C S+G C
Sbjct: 542 -----IHNTAGIYCDQCKAGYFGDPLAPNPAD--KCRACNCNPMG---SEPVGCRSDGTC 591
Query: 185 QCKPGVTGDKCD 196
CKPG G C+
Sbjct: 592 VCKPGFGGPNCE 603
>sp|Q61092|LAMC2_MOUSE Laminin subunit gamma-2 OS=Mus musculus GN=Lamc2 PE=1 SV=2
Length = 1191
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 106/218 (48%), Gaps = 59/218 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG G CL+C + G +CE+CR+ +Y+ + C CNC+
Sbjct: 28 CDCNGKSRQCVFDQELHRQTGSGFRCLNCNDNTAGVHCERCREGFYRHRDRDRCLPCNCH 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+ C++ G+C+CKPGVTG +CDRC + +AG C
Sbjct: 88 SKGSLSAGCDNSGQCRCKPGVTGQRCDRCQPGFHMLTDAG-----------------CTR 130
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+GQ +S + + DPAG ++ C+S
Sbjct: 131 DQGQLDS-----------------KCDCDPAG---------------------ISGPCDS 152
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG++CDRC +Y A GC C C
Sbjct: 153 -GRCVCKPAVTGERCDRCRPGYYHLDRANPEGCTQCFC 189
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GSL+ C++ G+C+CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSAGCDNSGQCRCKPGVTGQRCDRCQPGFHMLTDAGCTRDQGQLDSKCDCDPAGI--- 146
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ CDS G+C CK V G +C
Sbjct: 147 SGPCDS--GRCVCKPAVTGERC 166
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-------CTACNCNPIGSLNLQCNSEGRCQ 76
G CL C + G C++C+ Y+ GD C ACNC+P+GS +C +G C
Sbjct: 536 GRCLKCIYNTAGVYCDQCKAGYF---GDPLAPNPADKCRACNCSPMGSEPGECRGDGSCV 592
Query: 77 CKPGVTGDKCDRCDVN 92
CKPG G CD +
Sbjct: 593 CKPGFGGLNCDHAALT 608
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 186 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C PGVTG +C+ C + FGE G C+ C+CN + NCD + G+C +C
Sbjct: 484 CPPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNNVDPNASGNCDQLTGRCLKCIY 543
Query: 239 NVEGAQC 245
N G C
Sbjct: 544 NTAGVYC 550
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 77 CKPGVTGDKCDRCDVNHY--DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C PGVTG +C+ C + FGE G C+ C+CN + NCD + G+C
Sbjct: 484 CPPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNNVDPNASGNCDQLTGRCLKCIY 543
Query: 131 SSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCK 187
++ G V+ + Q + + DP D +C+ + P+G +C +G C CK
Sbjct: 544 NTAG-VYCD---QCKAGYFGDPLAPNPAD--KCRACNCSPMGSEPG---ECRGDGSCVCK 594
Query: 188 PGVTGDKCDRCDVN 201
PG G CD +
Sbjct: 595 PGFGGLNCDHAALT 608
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ + G C+KC+ + C CNCN GS + C G+C C+PGVTG KCD
Sbjct: 938 ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCD 997
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +++F E GC +CEC+ G+ NCD G+C
Sbjct: 998 RCAHGYFNFQEGGCTACECSHLGN-----NCDPKTGRC---------------------- 1030
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-------------GSLNLQCN-SEGRCQCKPGVTGD 193
P +C +T+ GH GSL+ QCN + G+C C P +G
Sbjct: 1031 ICPPNTIGEKCSKCAPNTW--GHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
KC C H+++ C C+C G+ T + ++ K GQC CK NVEG C
Sbjct: 1089 KCTECSRGHWNYPR--CNLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHC 1145
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ + C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C CN
Sbjct: 870 ----NLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVDAKNCQPCRCNAG 923
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS C S GQCE R V G R +CK T+ L
Sbjct: 924 GSFSEV--CHSQTGQCEC-----RANVQ--------------GQRC---DKCKAGTFGLQ 959
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+
Sbjct: 960 SARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL 1019
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD G+C C N G +C
Sbjct: 1020 GN-----NCDPKTGRCICPPNTIGEKC 1041
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCN----------SEGRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC +
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYT-- 461
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK+C C+ GS P
Sbjct: 462 GYPDCKACNCSGLGSKNEDP 481
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C KC N + S C ACNC+ +GSL+ QCN + G+C C P +
Sbjct: 1028 GRCI-CPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFS 1086
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G KC C H+++ C C+C G+ T CDS +C
Sbjct: 1087 GAKCTECSRGHWNYPR--CNLCDCFLPGTDATT--CDSETKKC 1125
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 105/268 (39%), Gaps = 66/268 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F +E G C CQ G C++C Y+ Q+ G CTAC
Sbjct: 967 CNCNSFGSKSFDCEE-------SGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACE 1015
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + GRC C P G+KC +C N + GCK+C C+ GS+
Sbjct: 1016 CSHLGN---NCDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDF-- 1070
Query: 117 NCDSVKGQC------ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLG 169
C+ GQC A+ + R H W+ RC D + G
Sbjct: 1071 QCNVNTGQCNCHPKFSGAKCTECSRGH------------------WNYPRCNLCDCFLPG 1112
Query: 170 HGGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECN 216
+ C+SE G+C CK V G CDRC + GC SC C
Sbjct: 1113 TDAT---TCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYC- 1168
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
T C KG ++ Q
Sbjct: 1169 ----FGTTTQCSEAKGLIRTWVTLKAEQ 1192
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
C C +G CE+C Y G+ C C C+P GSL + C+ G C C+PG T
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTCRPGAT 1553
Query: 83 GDKCDRCDVNH 93
G KCD C H
Sbjct: 1554 GRKCDGCKHWH 1564
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 28/140 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S+ C + + C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLCDPETSI---------CQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLN---LQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCE 105
C I S N C +EG RC C G G C+RC + G G C+ CE
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYT--GSPGNPGGSCQECE 1528
Query: 106 CNPAGSVKNTPNCDSVKGQC 125
C+P GS+ CD V G C
Sbjct: 1529 CDPYGSLPVP--CDPVTGFC 1546
Score = 38.5 bits (88), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
+ G C CK G G CDRC + G CK+C C+ GS N D G C CK+N
Sbjct: 438 APGSCHCKTGFGGVSCDRCARGYT--GYPDCKACNCSGLGS----KNEDPCFGPCICKEN 491
Query: 240 VEGAQC 245
VEG C
Sbjct: 492 VEGGDC 497
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 184 CQCKPGVTGDKCDRC-----DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECK 237
CQC PG TG C+ C VN FG C+ C+C + +CD V G+C CK
Sbjct: 724 CQCPPGYTGSSCESCWPRHRRVNGTIFG-GICEPCQC-----FGHAESCDDVTGECLNCK 777
Query: 238 DNVEGAQC 245
D+ G C
Sbjct: 778 DHTGGPYC 785
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 84/241 (34%), Gaps = 87/241 (36%)
Query: 28 DCQGDRDGPNCEKCRDNYYQ--------KSGDNF--CTACNCNPIGSLNLQCNSE-GRCQ 76
DC G +CE C +Y+ G C C CN SL C+ E CQ
Sbjct: 1381 DCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTCVPCQCNGHSSL---CDPETSICQ 1437
Query: 77 -CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQCESAQLSSRG 134
C+ GD C+RC + +Y G VK PN C QC +SS
Sbjct: 1438 NCQHHTAGDFCERCALGYY---------------GIVKGLPNDCQ----QCACPLISSS- 1477
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG----RCQ-CKPG 189
NF P+ C +EG RC C G
Sbjct: 1478 -----------NNFSPS--------------------------CVAEGLDDYRCTACPRG 1500
Query: 190 VTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
G C+RC + G G C+ CEC+P GS+ CD V G C C+ G +
Sbjct: 1501 YEGQYCERCAPGYT--GSPGNPGGSCQECECDPYGSLPVP--CDPVTGFCTCRPGATGRK 1556
Query: 245 C 245
C
Sbjct: 1557 C 1557
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+ G N E + R G C+ G +C++C Y +G C ACNC+
Sbjct: 416 CDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGY---TGYPDCKACNCS 472
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+GS N + G C CK V G C RC ++ E K C+
Sbjct: 473 GLGSKN-EDPCFGPCICKENVEGGDCSRCKSGFFNLQEDNWKGCD 516
>sp|Q8K3K1|USH2A_RAT Usherin OS=Rattus norvegicus GN=Ush2a PE=1 SV=1
Length = 1512
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 128/266 (48%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-- 52
C C+G ++ C +D + YNR G GG C DCQ G NCE C+D +Y+ G +
Sbjct: 571 CQCHGHASSCHYDASMDPFPLEYNRGG-GGVCDDCQHHTTGRNCESCQDYFYRPIGADPA 629
Query: 53 ---FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAG---CKS 103
C C+CN G+ N L C+ G +C CK V+G +C RC + Y C+
Sbjct: 630 DPEVCKHCDCNRDGTRNGSLLCDLVGDQCDCKRRVSGRRCFRCHIGFYGLQALDPDCCRP 689
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+CNP+G+V C GQC S + V LR R +F G + LR
Sbjct: 690 CDCNPSGTVDGDITCHHNSGQC-----SCKANV-IGLRCD-RCSF---GFKF--LRSLNA 737
Query: 164 DTYPLGH---GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
D H GS+N C+ G+C CK G +CD C N Y + C+ C+CN AG
Sbjct: 738 DGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLPWSACEVCDCNRAG 797
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ T CD+ GQC CK +V G +C
Sbjct: 798 TQAGT-VCDAETGQCVCKPSVGGRRC 822
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 107/233 (45%), Gaps = 29/233 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCKPGVT 82
DC+ G C +C +Y Q + C C+CNP G+++ + C+ + G+C CK V
Sbjct: 659 DCKRRVSGRRCFRCHIGFYGLQALDPDCCRPCDCNPSGTVDGDITCHHNSGQCSCKANVI 718
Query: 83 GDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G +CDRC + F + GC+ C CN GSV CD + GQC + ++G
Sbjct: 719 GLRCDRCSFG-FKFLRSLNADGCEPCHCNLHGSVNQL--CDPLSGQCVCKK-EAKG---- 770
Query: 139 ELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
LR R+NF ++ C R G C++E G+C CKP V G +C
Sbjct: 771 -LRCDVCRENFYGLPWSACEVCDCNRA------GTQAGTVCDAETGQCVCKPSVGGRRCS 823
Query: 197 RCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C +++ + C C C G+V + CD GQC CK V G +C
Sbjct: 824 ECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCKLGVTGLRCH 876
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 114/249 (45%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ G C +C++ Y+ +++ + C CNC G++N L C+ S G+C CK
Sbjct: 809 GQCV-CKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCK 867
Query: 79 PGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C +C + ++ GC++C+C+ G++ + CD V GQC
Sbjct: 868 LGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLLGS-MCDPVSGQC---------- 916
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYPLGHGGSL----------NLQCNS 180
L + R+ RRC + + P G L N CNS
Sbjct: 917 ----LCLPHRQE-----------RRCVQCQPGCYSSPSNATGCLPCLCHTVATKNCICNS 961
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G C C P TG +C ++ F C+ C C+ AG+ T CD+V GQC C
Sbjct: 962 VTGHCYCPDPSTTGLSWHQCQDRYFRFDPLTGRCRPCHCHVAGASNGT--CDAVTGQCFC 1019
Query: 237 KDNVEGAQC 245
K+ V G++C
Sbjct: 1020 KEFVTGSKC 1028
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 20/226 (8%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDK 85
C+ + G C++C + + + C C+CN GS+N C+ G+C CK G +
Sbjct: 713 CKANVIGLRCDRCSFGFKFLRSLNADGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLR 772
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y + C+ C+CN AG+ T CD+ GQC + S GR +E + +
Sbjct: 773 CDVCRENFYGLPWSACEVCDCNRAGTQAGT-VCDAETGQC-VCKPSVGGRRCSECK-EGY 829
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKCDRCDVNH 202
N + + C++ G++N L C+ S G+C CK GVTG +C +C +
Sbjct: 830 FNLRQNDSHLCLPCNCEKT-------GTVNGSLLCDKSTGQCPCKLGVTGLRCHQCKPHR 882
Query: 203 YDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ GC++C+C+ G++ + CD V GQC C + + +C
Sbjct: 883 FNLTMDNPQGCQACDCDSLGTLLGS-MCDPVSGQCLCLPHRQERRC 927
Score = 37.4 bits (85), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C+ + + + DN C AC+C+ +G+L C+ G+C C P
Sbjct: 866 CKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLLGSMCDPVSGQCLCLPHRQER 925
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C +C Y GC C C+ + KN C+SV G C S+ G + +
Sbjct: 926 RCVQCQPGCYSSPSNATGCLPCLCHTVAT-KNC-ICNSVTGHCYCPDPSTTGLSWHQCQD 983
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
+ + FDP R R C G+ N C++ G+C CK VTG KCD C
Sbjct: 984 RYFR-FDPLTGRC---RPCHCHV-----AGASNGTCDAVTGQCFCKEFVTGSKCDTC 1031
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ-KSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GHC G + +C+D Y++ C C+C+ G+ N C++ G+C CK V
Sbjct: 964 GHCYCPDPSTTGLSWHQCQDRYFRFDPLTGRCRPCHCHVAGASNGTCDAVTGQCFCKEFV 1023
Query: 82 TGDKCDRC 89
TG KCD C
Sbjct: 1024 TGSKCDTC 1031
>sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2
Length = 1786
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 54 CTACNCNPIGSLNL-QCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N C+S G+C+CK V G+ CD C YD G
Sbjct: 395 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-- 158
CKSC CNP G++ CDS G C R+ + ++ D W L
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGHCYCK------------RLVTGQHCDQCLPEHWGLSN 502
Query: 159 -----RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R C D GG+LN C +E G+C C+P + G +C+ + +Y
Sbjct: 503 DLDGCRPCDCDL-----GGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 108/277 (38%), Gaps = 61/277 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C G CL+CQ G NCE+C YY
Sbjct: 867 CQCNGHADDC---------DPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPC 917
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
SG F +C +P+ +L L C C PG G +CD C ++ + E G
Sbjct: 918 PCPDGPDSGRQFARSCYQDPV-TLQLA------CVCDPGYIGSRCDDCASGYFGNPSEVG 970
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WD 157
C+ C+C+ + CD G+C + HTE F G+ + D
Sbjct: 971 GSCQPCQCHNNIDTTDPEACDKETGRC------LKCLYHTEGEHCQFCRFGYYGDALQQD 1024
Query: 158 LRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPGVTGDKCDRCDVNHYDFGE-A 208
R+C + G++ CN + G+C C P V G CDRC N +
Sbjct: 1025 CRKCV-----CNYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGT 1079
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C CN A S P+C+ GQC+C G C
Sbjct: 1080 GCDPCNCNAAHSFG--PSCNEFTGQCQCMPGFGGRTC 1114
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GCK CEC+ GSV C+ V GQC
Sbjct: 810 TFGFGPSGCKPCECHLQGSVNAF--CNPVTGQC 840
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 102/278 (36%), Gaps = 91/278 (32%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFNEEVEGMVH--GHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNPIGSLNLQCN------------SEGRCQ-CKPGVTGDKCDRCDVNHYDF 96
N C CNCN ++ C+ S G C C+ G C++C +Y
Sbjct: 328 NSNACKKCNCN---EHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQH 384
Query: 97 GEAG------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
E C+ C C+PAGS +G C+S S G +
Sbjct: 385 PERDIRDPNFCERCTCDPAGSQN--------EGICDSYTDFSTGLI-------------- 422
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-- 208
G+C+CK V G+ CD C YD
Sbjct: 423 ------------------------------AGQCRCKLNVEGEHCDVCKEGFYDLSSEDP 452
Query: 209 -GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GCKSC CNP G++ CDS G C CK V G C
Sbjct: 453 FGCKSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHC 490
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV C+ V
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAF--CNPV 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 837 TGQCHCFQGVYARQC 851
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 100/237 (42%), Gaps = 28/237 (11%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS+N CN G+C C GV
Sbjct: 789 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGV 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC H+ F C+ C+CN + +CD V G+C + Q + G H R
Sbjct: 847 YARQCDRCLPGHWGF--PSCQPCQCN-----GHADDCDPVTGECLNCQDYTMG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQL----ACVCDPGYIGS 953
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C ++ + E G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 954 RCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1010
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CEC+P GS+ + CD GQC+C+ NV G C
Sbjct: 772 ACECDPQGSLSSV--CDPNGGQCQCRPNVVGRTC 803
>sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2
Length = 3333
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 127/271 (46%), Gaps = 42/271 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G ++ C++D ++ + GG C++CQ + G NCE+C YY+ G
Sbjct: 356 CNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 415
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S GRC CKP GD C++C + +Y+F C
Sbjct: 416 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAIGYYNF-----PFCLR 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-----RVQSRKNFDPAGNRIWDLRRC 161
P V + D V G + + G V E+ R R + G R D R
Sbjct: 470 IPIFPVSTPSSEDPVAGDIKGCDCNLEG-VLPEICDAHGRCLCRPGVE--GPRC-DTCRS 525
Query: 162 KRDTYPL------GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
++P+ GS + C+S G+C+C+PGVTG +CDRC YDF S
Sbjct: 526 GFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSA 585
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PAG++ +S G C+CK +VEG C
Sbjct: 586 CDPAGTI------NSNLGYCQCKLHVEGPTC 610
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 44/238 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 507 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ +S G C+ ++H E
Sbjct: 563 GQRCDRCLSGAYDFPHCQGSSSACDPAGTI------NSNLGYCQC-------KLHVEGPT 609
Query: 143 QSRKNFDPAGNRIWDLR----------RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVT 191
SR W+L +C + G G +C +G C CK V
Sbjct: 610 CSRCKL-----LYWNLDKENPSGCSECKCHKAGTVSGTG-----ECRQGDGDCHCKSHVG 659
Query: 192 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
GD CD C+ ++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 660 GDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSM--CSGPSGVCQCREHVVGKVCQ 715
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 105/240 (43%), Gaps = 44/240 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQ--------------------KSGDNFCTACNCNPIGSLNLQ 68
C+ + G NCEKC YY +GD C+CN G L
Sbjct: 445 CKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGD--IKGCDCNLEGVLPEI 502
Query: 69 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C++ GRC C+PGV G +CD C Y F C++C C+ GS + C SV GQCE
Sbjct: 503 CDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSYQMP--CSSVTGQCECR 558
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
+ R D + +D C+ + G++N ++ G CQCK
Sbjct: 559 PGVTGQRC------------DRCLSGAYDFPHCQGSSSACDPAGTIN---SNLGYCQCKL 603
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G C RC + +++ + +GC C+C+ AG+V T C G C CK +V G C
Sbjct: 604 HVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSC 663
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 90/225 (40%), Gaps = 55/225 (24%)
Query: 37 NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYD 95
N + +Y K C C+P G+ C+ EG +C C+P V G +C RC HY
Sbjct: 1250 NSARSLVAFYHKGA----LPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYG 1305
Query: 96 FGEAGCKSCECNPAGSVKNTPNCD----SVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
F CK C C + T C +V+ QCE + S +F P
Sbjct: 1306 FPR--CKPCSCGRRLCEEMTGQCRCPPRTVRPQCEVCETHSF-------------SFHPM 1350
Query: 152 -----------GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
G + C RD+ G+C+CKP +TG +CDRC
Sbjct: 1351 AGCEGCNCSRRGTIEAAMPECDRDS----------------GQCRCKPRITGRQCDRCAS 1394
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y F E C C CN G+ CD G C CK+NVEG +C
Sbjct: 1395 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGACLCKENVEGTEC 1435
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SN+C G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1687 CNCNGHSNQC---------QDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCP 1737
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1738 HTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 1796
Query: 114 NTPNCDSVKGQC 125
+C + G C
Sbjct: 1797 ---SCHPLTGDC 1805
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 103/264 (39%), Gaps = 63/264 (23%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN--------------PIGSLN 66
+CQ G C++C Y Q+ + C ACNC+ SLN
Sbjct: 320 ECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASNCYYDPDVERQQASLN 379
Query: 67 LQCNSEGR---CQCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPN 117
Q G C+ G C++C +Y +G GC C C+P ++
Sbjct: 380 TQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDP----EHADG 435
Query: 118 CDSVKGQ-----------CESAQLSSRG-----RVHTELRVQSRKNFDPAGNRIWDLRRC 161
C+ G+ CE + R+ V + + DP D++ C
Sbjct: 436 CEQGSGRCHCKPNFHGDNCEKCAIGYYNFPFCLRIPI-FPVSTPSSEDPVAG---DIKGC 491
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
+ G L C++ GRC C+PGV G +CD C Y F C++C C+ GS
Sbjct: 492 DCNL-----EGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSF--PICQACWCSALGSY 544
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ C SV GQCEC+ V G +C
Sbjct: 545 QMP--CSSVTGQCECRPGVTGQRC 566
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEGRCQCKPGVTGDKCDRCDV 91
P CE C + + C CNC+ G++ G+C+CKP +TG +CDRC
Sbjct: 1335 PQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCAS 1394
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
Y F E C C CN G+ CD G C
Sbjct: 1395 GFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1424
Score = 38.5 bits (88), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G +C+ C D Y+ N+ C C C+ G+L+ C+ G CQC+ V G
Sbjct: 654 CKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKV 713
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 714 CQRPENNYY 722
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 80/204 (39%), Gaps = 38/204 (18%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C CQ + G C +C +Y G C C+C L G+C+C P
Sbjct: 1282 GGQC-PCQPNVIGRQCTRCATGHY---GFPRCKPCSCG----RRLCEEMTGQCRCPPRTV 1333
Query: 83 GDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKN-TPNCDSVKGQCESAQLSSRGRVHTEL 140
+C+ C+ + + F AGC+ C C+ G+++ P CD GQC
Sbjct: 1334 RPQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKP----------- 1382
Query: 141 RVQSRKNFDPAGNRIWDLRRC-----KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDK 194
R+ R+ D + + C RD G+ C+ G C CK V G +
Sbjct: 1383 RITGRQC-DRCASGFYRFPECVPCNCNRD-------GTEPGVCDPGTGACLCKENVEGTE 1434
Query: 195 CDRCDVNHYDFGEA---GCKSCEC 215
C+ C + A GC SC C
Sbjct: 1435 CNVCREGSFHLDPANLKGCTSCFC 1458
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 183 RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC---E 235
RC CK G TG +C+RC ++ FG C+ C CN G + +C + G C E
Sbjct: 1754 RCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG---SCHPLTGDCINQE 1809
Query: 236 CKDNVEGAQC 245
KD+ +C
Sbjct: 1810 PKDSSPAEEC 1819
>sp|Q9H1U4|MEGF9_HUMAN Multiple epidermal growth factor-like domains protein 9 OS=Homo
sapiens GN=MEGF9 PE=2 SV=3
Length = 602
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C+ G +CE C++ +Y C C+C+P G+L++ CNS G+CQCK GV G CD
Sbjct: 225 ECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPHGALSIPCNSSGKCQCKVGVIGSICD 284
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC +Y F + GC C+CN + +CD++ G C + Q +S+G H E + ++
Sbjct: 285 RCQDGYYGFSKNGCLPCQCN-----NRSASCDALTGACLNCQENSKGN-HCE---ECKEG 335
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF 205
F + + + RC + GS +++ + E C QCK G G C++C+ +Y+F
Sbjct: 336 FYQSPDATKECLRCPCSA--VTSTGSCSIKSSELEPECDQCKDGYIGPNCNKCENGYYNF 393
Query: 206 GEAGCKSCECN-PAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
++ C+ C+C+ VK C G+C C N G C
Sbjct: 394 -DSICRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCE 435
>sp|Q9HB63|NET4_HUMAN Netrin-4 OS=Homo sapiens GN=NTN4 PE=2 SV=2
Length = 628
Score = 90.9 bits (224), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQSRKNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 495
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 496 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 524
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 177 QCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN----CDSV 230
Q N+EG+ CQ CKPG D + CK C C+P GS N CD
Sbjct: 363 QHNTEGQYCQRCKPGFYRD------LRRPFSAPDACKPCSCHPVGSAVLPANSVTFCDPS 416
Query: 231 KGQCECKDNVEGAQC 245
G C CK V G +C
Sbjct: 417 NGDCPCKPGVAGRRC 431
>sp|Q8BH27|MEGF9_MOUSE Multiple epidermal growth factor-like domains protein 9 OS=Mus
musculus GN=Megf9 PE=2 SV=1
Length = 600
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 108/226 (47%), Gaps = 22/226 (9%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC G +C+ C++ +Y C C+C+P G++++ CNS G CQCK GVTG CD
Sbjct: 223 DCHVGYQGLHCDTCKEGFYLNHTVGLCLPCHCSPHGAVSILCNSSGNCQCKVGVTGSMCD 282
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+C HY FG+ GC C+CN + +CD G C + Q +S+G H E + ++
Sbjct: 283 KCQDGHYGFGKTGCLPCQCN-----NRSDSCDVHTGACLNCQENSKGE-HCE---ECKEG 333
Query: 148 FDPAGNRIWDLRRCK-RDTYPLG----HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
F P+ + RC G G L C+ QCK G TG C++C+ +
Sbjct: 334 FYPSPDAAKQCHRCPCSAVTSTGNCTIESGELEPTCD-----QCKDGYTGQNCNKCENGY 388
Query: 203 YDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQC-ECKDNVEGAQCR 246
Y+ ++ C CEC+ TP C G+C C N G C
Sbjct: 389 YN-SDSICTQCECHGHVDPIKTPKICKPESGECINCLHNTTGFWCE 433
>sp|Q5RB89|NET4_PONAB Netrin-4 OS=Pongo abelii GN=NTN4 PE=2 SV=1
Length = 628
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 45/220 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR-KNFDPAGNR---IWDLRRCK 162
AGS CD + G C S+ HT++ +F P N+ W+ +
Sbjct: 452 --AGS------CDPITGDCISS--------HTDIDWHHEFPDFRPVHNKSEAAWEWEDAQ 495
Query: 163 RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
G L+ G+C+CK G+ C + +
Sbjct: 496 ------GFSALLH-----SGKCECKEQTLGNAKAFCGMKY 524
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 12/75 (16%)
Query: 177 QCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN----CDSV 230
Q N+EG+ CQ CKPG D + CK C C+P GS N CD
Sbjct: 363 QHNTEGQHCQRCKPGFYRD------LRRPFSAPDACKPCSCHPVGSAVLPANSVTFCDPS 416
Query: 231 KGQCECKDNVEGAQC 245
G C CK V G C
Sbjct: 417 NGDCPCKPGVAGRHC 431
>sp|Q2QI47|USH2A_MOUSE Usherin OS=Mus musculus GN=Ush2A PE=1 SV=2
Length = 5193
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 127/266 (47%), Gaps = 35/266 (13%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG---- 50
C C+G ++ C +D + +NR G GG C DCQ G +CE C+D +Y+ G
Sbjct: 572 CQCHGHASSCHYDASVDPFPLEHNRGG-GGVCDDCQHHTTGRHCESCQDYFYRPVGADPA 630
Query: 51 -DNFCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
+ C C+CN G+ N L C+ G +C CK V+G +C +C YD GC+
Sbjct: 631 APDACKLCDCNRAGTRNGSLHCDPIGGQCDCKRRVSGRQCLQCQDGFYDLQALDPDGCRP 690
Query: 104 CECNPAGSVKNTPNCDSVKGQ--CESAQLSSR-GRVHTELRVQSRKNFDPAGNRIWDLRR 160
C CNP+G+V C GQ C++ + R R + + N D
Sbjct: 691 CNCNPSGTVDGDITCHQNSGQCSCKANVIGLRCNRCNFGFKFLQSFNGD-------GCEP 743
Query: 161 CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
C+ + + GS+N C+ G+C CK G KCD C N Y + C+ C+C+ AG
Sbjct: 744 CQCNLH-----GSVNQLCDPLSGQCACKKEAKGLKCDSCRENFYGLPWSACEVCDCSKAG 798
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
S T CD+ GQC CK NV G QC
Sbjct: 799 SQPGT-VCDTETGQCVCKPNVGGRQC 823
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C+ Y+ ++ + C CNC +G++N L+C+ S G+C CK
Sbjct: 810 GQCV-CKPNVGGRQCSQCKAGYFNLYQNDSHLCLTCNCEKMGTVNGSLRCDKSTGQCPCK 868
Query: 79 PGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C +C + ++ GC++C+C+ G++ + CD + GQC
Sbjct: 869 LGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGS-MCDPISGQC---------- 917
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-----DTYP---------LGH-GGSLNLQCNS 180
L + R+ RRC++ + P L H G+++ CNS
Sbjct: 918 ----LCLPHRQG-----------RRCEQCQPGFYSSPSNATGCLPCLCHTAGAVSHICNS 962
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C P TG C +C +++ F C+ C C+ AG+ T CD+V GQC C
Sbjct: 963 VTGQCSCHDPSTTGRSCHQCQESYFRFDPLTGRCRPCHCHVAGASNGT--CDAVTGQCFC 1020
Query: 237 KDNVEGAQC 245
K+ V G++C
Sbjct: 1021 KEFVTGSKC 1029
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C+ + + + DN C AC+C+ +G+L C+ G+C C P G
Sbjct: 867 CKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGSMCDPISGQCLCLPHRQGR 926
Query: 85 KCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ AG+V + C+SV GQC S+ GR + +
Sbjct: 927 RCEQCQPGFYSSPSNATGCLPCLCHTAGAVSHI--CNSVTGQCSCHDPSTTGRSCHQCQ- 983
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC--- 198
+S FDP R R C G+ N C++ G+C CK VTG KCD C
Sbjct: 984 ESYFRFDPLTGRC---RPCHCHV-----AGASNGTCDAVTGQCFCKEFVTGSKCDTCVPG 1035
Query: 199 ----DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
DVN+ G + S + P G V+++ + EC +
Sbjct: 1036 ASHLDVNNL-LGCSKTPSQQPPPRGWVQSSSTINVSWSPPECPN 1078
>sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus musculus GN=Lama2 PE=1 SV=1
Length = 3106
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 117/242 (48%), Gaps = 30/242 (12%)
Query: 12 FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS 71
F ++ + RTG +C+ + G +C++C+ + C CNCN GS + C +
Sbjct: 922 FSEDCHTRTGQ----CECRPNVQGRHCDECKPETFGLQLGRGCLPCNCNSFGSKSFDCEA 977
Query: 72 EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C+PGV G KCDRC +++F E GC +C+C+ G+ NCD GQC +
Sbjct: 978 SGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHLGN-----NCDPKTGQCICPP-N 1031
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
+ G +E + + G ++ C T GSL QCN + G+C C P
Sbjct: 1032 TTGEKCSECLPNTWGHSIVTGCKV-----CNCSTV-----GSLASQCNVNTGQCSCHPKF 1081
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGA 243
+G KC C H+++ C C+C G+ T + ++ K GQC CK NVEG
Sbjct: 1082 SGMKCSECSRGHWNY--PLCTLCDCFLPGTDATTCDLETRKCSCSDQTGQCSCKVNVEGV 1139
Query: 244 QC 245
C
Sbjct: 1140 HC 1141
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 112/267 (41%), Gaps = 66/267 (24%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ + C C CN
Sbjct: 812 NNFSPTCHLDRSL------GLICDECPIGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 865
Query: 62 IGSLNLQCNSEGRCQ--------CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPA 109
NL + G C CKPG TG C+ C + FG+A C+ C C+
Sbjct: 866 ----NLDYSIPGSCDSLSGSCLICKPGTTGRYCELCADGY--FGDAVNTKNCQPCRCDIN 919
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
GS +C + GQCE VQ R CK +T+ L
Sbjct: 920 GSFSE--DCHTRTGQCECRP-----------NVQGRH-----------CDECKPETFGLQ 955
Query: 170 HG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
G GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+
Sbjct: 956 LGRGCLPCNCNSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHL 1015
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ NCD GQC C N G +C
Sbjct: 1016 GN-----NCDPKTGQCICPPNTTGEKC 1037
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 105/254 (41%), Gaps = 60/254 (23%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY------------------QKSGDNFCTACNCNPIGSL 65
G CL+C+ GP C +C +Y +NF C+ + SL
Sbjct: 767 GECLNCKDHTGGPYCNECLPGFYGDPTRGSPEDCQPCACPLNIPSNNFSPTCHLD--RSL 824
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-----GCKSCECNPAGSVKNTPNCDS 120
L C+ +C G TG +C+RC + FG+ C+ C+CN +CDS
Sbjct: 825 GLICD-----ECPIGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDYSIPGSCDS 877
Query: 121 VKGQCESAQLSSRGRVHTEL-------RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
+ G C + + GR + EL + KN P C+ D GS
Sbjct: 878 LSGSCLICKPGTTGR-YCELCADGYFGDAVNTKNCQP----------CRCDI-----NGS 921
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVK 231
+ C++ G+C+C+P V G CD C + GC C CN GS + +C++
Sbjct: 922 FSEDCHTRTGQCECRPNVQGRHCDECKPETFGLQLGRGCLPCNCNSFGS--KSFDCEA-S 978
Query: 232 GQCECKDNVEGAQC 245
GQC C+ V G +C
Sbjct: 979 GQCWCQPGVAGKKC 992
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 97/238 (40%), Gaps = 59/238 (24%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F D E G C CQ G C++C Y+ Q+ G C AC+
Sbjct: 963 CNCNSFGSKSF-DCE------ASGQCW-CQPGVAGKKCDRCAHGYFNFQEGG---CIACD 1011
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 116
C+ +G+ C+ + G+C C P TG+KC C N + GCK C C+ GS+ +
Sbjct: 1012 CSHLGN---NCDPKTGQCICPPNTTGEKCSECLPNTWGHSIVTGCKVCNCSTVGSLAS-- 1066
Query: 117 NCDSVKGQCE-SAQLS-------SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
C+ GQC + S SRG W+ C D +
Sbjct: 1067 QCNVNTGQCSCHPKFSGMKCSECSRGH--------------------WNYPLCTLCDCFL 1106
Query: 168 LGHGGSL-NLQC------NSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
G + +L+ + G+C CK V G CDRC + GC SC C
Sbjct: 1107 PGTDATTCDLETRKCSCSDQTGQCSCKVNVEGVHCDRCRPGKFGLDAKNPLGCSSCYC 1164
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
C C +G CE+C Y S C C C+P GSL + C+ G C C+PG T
Sbjct: 1490 CTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDRVTGLCTCRPGAT 1549
Query: 83 GDKCDRCDVNH 93
G KCD C+ H
Sbjct: 1550 GRKCDGCEHWH 1560
Score = 38.5 bits (88), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G CDRC ++ G C+ C C+ GS N D G C CK+NVE
Sbjct: 436 GSCHCKTGFGGVNCDRCVRGYH--GYPDCQPCNCSGLGST----NEDPCVGPCSCKENVE 489
Query: 242 GAQC 245
G C
Sbjct: 490 GEDC 493
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CNG S++C D E C +CQ G CE+C YY + N C C
Sbjct: 1416 CQCNGHSSQC--DPE-------TSVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCA 1466
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C +P + + C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1467 CPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1526
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ CD V G C
Sbjct: 1527 PYGSLPVP--CDRVTGLC 1542
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 6 FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL 65
S C D++ R G C C+ G NC++C Y+ G C CNC+ +GS
Sbjct: 418 LSEVCVKDEKYAQRGLKPGSC-HCKTGFGGVNCDRCVRGYH---GYPDCQPCNCSGLGST 473
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
N + G C CK V G+ C RC ++ E K CE
Sbjct: 474 N-EDPCVGPCSCKENVEGEDCSRCKSGFFNLQEDNQKGCE 512
Score = 31.2 bits (69), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 186 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C G G C+RC + + C+ CEC+P GS+ CD V G C C+ G
Sbjct: 1493 CPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVP--CDRVTGLCTCRPGATG 1550
Query: 243 AQC 245
+C
Sbjct: 1551 RKC 1553
>sp|Q9JI33|NET4_MOUSE Netrin-4 OS=Mus musculus GN=Ntn4 PE=2 SV=2
Length = 628
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 22/142 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C AC+C+P+GS L +S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKACSCHPVGSAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCISS 465
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
S G C CKPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 416 SNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 462
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 175 NLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS----VKNTPNCD 228
N Q N+EG+ CQ CKPG D + CK+C C+P GS + CD
Sbjct: 361 NCQHNTEGQHCQRCKPGFYRD------LRRPFSAPDACKACSCHPVGSAILPFSSVTFCD 414
Query: 229 SVKGQCECKDNVEGAQC 245
G C CK V G C
Sbjct: 415 PSNGDCPCKPGVAGPHC 431
>sp|Q8JHV6|LAMB4_DANRE Laminin subunit beta-4 OS=Danio rerio GN=lamb4 PE=2 SV=1
Length = 1827
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 105/209 (50%), Gaps = 23/209 (11%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ---KSGDN--F 53
CNC+ S +C F+ Y TG GG C DC+ +R GP CE C YYQ +S D+
Sbjct: 334 CNCHSHSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQDPQRSVDDPYA 393
Query: 54 CTACNCNPIGSLN--LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNP 108
C C+C+ GS++ L G+C CK + G++CDRC V Y F +GC+ C CN
Sbjct: 394 CIPCDCDLDGSVDRGLCDPVNGQCVCKQNIEGERCDRCKVGFYGFSRDDPSGCQLCRCNF 453
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G+++ CD G+C + + Q + GN ++ C D
Sbjct: 454 LGTIQVGNPCDPTTGRCICEHFAYGSQCD-----QCLPGYWGLGNTVYGCIPCDCDI--- 505
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCD 196
GG+L +C+S +G+C+C+P + G KC+
Sbjct: 506 --GGALKTECSSVDGQCKCRPNMVGQKCN 532
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + G C+ C Y G N C+ C+C+ GS C+ + G+C C+ G+
Sbjct: 869 GGQC-QCKPNVIGRCCDSCAPLTY-GLGPNGCSPCDCDRSGSTTELCDQTTGQCSCRDGI 926
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
TG +C+RC +Y F C+ C+CN + CD + G C + S GR + E R
Sbjct: 927 TGLQCNRCYPGYYGF--PLCRRCQCNRLADI-----CDPITGDCLDCREHSAGR-NCE-R 977
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR-----CQCKPGVTGDKCD 196
+ DP + + C G G CN + R C+C PG TG +CD
Sbjct: 978 CEEGYVGDPVSGQPCEPCLCPDLN---GSGRFFAFSCNKDPRSGAPYCECLPGHTGPQCD 1034
Query: 197 RCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCRS 247
C Y D G CK C CN ++ CD V G+C C N EG +C+S
Sbjct: 1035 SCSPGFYGDLRLPGGRCKECCCNNNIDPRDGDACDPVTGECLRCLHNTEGPRCQS 1089
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 25/190 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS---------EGR 74
G CL C + +GP C+ C+ YY + C C+C+ G+ + +C + G+
Sbjct: 1073 GECLRCLHNTEGPRCQSCKRGYYGNALAQDCKECSCDRRGTDDSKCPAGSPCFCDQDTGQ 1132
Query: 75 CQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C+PGV G C+ CD +++ G+ GC+ C CN ++ CD + GQC Q
Sbjct: 1133 CPCRPGVQGALCNECDDGYWNMDGDYGCQPCNCNREHALNYI--CDKITGQC-LCQPEYG 1189
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR+ E +F GN C + G+++ C++ G C CKPGVTG
Sbjct: 1190 GRICDEC---GPNHF---GNPDLQCMFCDCNL-----EGTVHPACDAYTGECLCKPGVTG 1238
Query: 193 DKCDRCDVNH 202
CD C H
Sbjct: 1239 PFCDECAPGH 1248
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 121/279 (43%), Gaps = 48/279 (17%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQ-------K 48
C CNG +++C + + G G C+ CQ + G NCE+C+D Y+ K
Sbjct: 267 CFCNGHASQCIPVDGARGDTFTEPGMVHGRCV-CQHNTAGYNCERCQDFYHDAPWRPGGK 325
Query: 49 SGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVN------------HYD 95
+ + C CNC+ S + +C+ E R GV+G CD C N +Y
Sbjct: 326 ADSDVCKRCNCH---SHSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQ 382
Query: 96 FGE------AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT-ELRVQSRKNF 148
+ C C+C+ GSV CD V GQC Q R ++
Sbjct: 383 DPQRSVDDPYACIPCDCDLDGSVDRG-LCDPVNGQCVCKQNIEGERCDRCKVGFYGFSRD 441
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
DP+G + L RC LG N + GRC C+ G +CD+C ++ G
Sbjct: 442 DPSGCQ---LCRCNF----LGTIQVGNPCDPTTGRCICEHFAYGSQCDQCLPGYWGLGNT 494
Query: 209 --GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC C+C+ G++K C SV GQC+C+ N+ G +C
Sbjct: 495 VYGCIPCDCDIGGALKT--ECSSVDGQCKCRPNMVGQKC 531
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N +CNC+ +G+ C+ G +CQCKP V G CD C Y G GC C+C+ +G
Sbjct: 848 NGAVSCNCHHVGAYGSSCSKFGGQCQCKPNVIGRCCDSCAPLTYGLGPNGCSPCDCDRSG 907
Query: 111 SVKNTPNCDSVKGQC 125
S T CD GQC
Sbjct: 908 S--TTELCDQTTGQC 920
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
+LN C+ G+C C+P G CD C NH+ + C C+CN G+V P CD+
Sbjct: 1170 ALNYICDKITGQCLCQPEYGGRICDECGPNHFGNPDLQCMFCDCNLEGTVH--PACDAYT 1227
Query: 232 GQCECKDNVEGAQC 245
G+C CK V G C
Sbjct: 1228 GECLCKPGVTGPFC 1241
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 86/237 (36%), Gaps = 68/237 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNCNPIGS----LNLQCNSEGR---- 74
G CLDC+ G NCE+C + Y C C C + CN + R
Sbjct: 961 GDCLDCREHSAGRNCERCEEGYVGDPVSGQPCEPCLCPDLNGSGRFFAFSCNKDPRSGAP 1020
Query: 75 -CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C+C PG TG +CD C Y D G CK C CN ++ CD V G+C
Sbjct: 1021 YCECLPGHTGPQCDSCSPGFYGDLRLPGGRCKECCCNNNIDPRDGDACDPVTGECLRCLH 1080
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC-KPG 189
++ G R QS CKR Y G +L C C C + G
Sbjct: 1081 NTEGP-----RCQS----------------CKRGYY----GNALAQDCK---ECSCDRRG 1112
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP-NCDSVKGQCECKDNVEGAQC 245
KC PAGS P CD GQC C+ V+GA C
Sbjct: 1113 TDDSKC---------------------PAGS----PCFCDQDTGQCPCRPGVQGALC 1144
>sp|Q61001|LAMA5_MOUSE Laminin subunit alpha-5 OS=Mus musculus GN=Lama5 PE=1 SV=4
Length = 3718
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ DGP+C++C Y+ G C AC C+P G+L+ QC G C C+PG TG C
Sbjct: 613 CRPGFDGPHCDRCLPGYH---GYPDCHACACDPRGALDQQCGVGGLCHCRPGYTGATCQE 669
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV---HTELRVQSR 145
C Y F C C C+ GS+ T CD GQC R RV H ++ V
Sbjct: 670 CSPGFYGF--PSCIPCHCSADGSLHTT--CDPTTGQCR-----CRPRVTGLHCDMCVPGA 720
Query: 146 KNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD 204
NF C+ + +P G + ++ C C+ V G CDRC ++
Sbjct: 721 YNFP----------YCEAGSCHPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGYWG 770
Query: 205 FGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ GC C C+P G++ C GQC CK +V G C +
Sbjct: 771 LSASNPEGCTRCSCDPRGTLGGVTECQG-NGQCFCKAHVCGKTCAA 815
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 93/232 (40%), Gaps = 56/232 (24%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G HC C GP+C C+ C+ G N C+ E G+C C+ G
Sbjct: 529 GAHCELCAPGFHGPSCHPCQ----------------CSSPGVANSLCDPESGQCMCRTGF 572
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
GD+CD C + ++ F C+ C C+PAG++ CD G+C
Sbjct: 573 EGDRCDHCALGYFHF--PLCQLCGCSPAGTLPE--GCDEA-GRC---------------- 611
Query: 142 VQSRKNFD--------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
Q R FD P + D C D G+L+ QC G C C+PG TG
Sbjct: 612 -QCRPGFDGPHCDRCLPGYHGYPDCHACACDPR-----GALDQQCGVGGLCHCRPGYTGA 665
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C Y F C C C+ GS+ T CD GQC C+ V G C
Sbjct: 666 TCQECSPGFYGF--PSCIPCHCSADGSLHTT--CDPTTGQCRCRPRVTGLHC 713
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 118/290 (40%), Gaps = 76/290 (26%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+G + C++D E+ R GG CLDCQ G NCE+C +++
Sbjct: 364 CNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQ 423
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-------- 98
+ C C+C + + GRC C+P TG+ C C + DF
Sbjct: 424 PLDSPHVCRPCDCESDFTDGTCEDLTGRCYCRPNFTGELCAACAEGYTDFPHCYPLPSFP 483
Query: 99 ----------AG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
AG +C+CN AG+ N D G+C + + RG H EL
Sbjct: 484 HNDTREQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRC-VCKPNFRG-AHCEL------- 534
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNSE-GRCQCKPGVTGDKC 195
C P HG G N C+ E G+C C+ G GD+C
Sbjct: 535 -------------CA----PGFHGPSCHPCQCSSPGVANSLCDPESGQCMCRTGFEGDRC 577
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D C + ++ F C+ C C+PAG++ CD G+C+C+ +G C
Sbjct: 578 DHCALGYFHF--PLCQLCGCSPAGTLPE--GCDEA-GRCQCRPGFDGPHC 622
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 109/262 (41%), Gaps = 42/262 (16%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G C+ CQ + +G CE+CR + N C +C
Sbjct: 1865 CQCHGHSDRCLPGS---------GICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSC 1915
Query: 58 NCNPIGSLN-------LQCNSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
C P+ + + N +C C+PG G C+RC + + C+ C+C+
Sbjct: 1916 PC-PLAVPSNNFADGCVLRNGRTQCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDCS 1974
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DT 165
G +CD + G C + G H E + F GN + C R D
Sbjct: 1975 GNGDPNMIFSDCDPLTGACRGCLRHTTGP-HCE---RCAPGF--YGNALLP-GNCTRCDC 2027
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN 223
P G C+ + GRC CK GVTG +CDRC ++ F + GC+ C C PA
Sbjct: 2028 SPCG-----TETCDPQSGRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGS- 2081
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
C GQC C+ G QC
Sbjct: 2082 --ECHPQSGQCHCQPGTTGPQC 2101
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP+CE+C +Y + CT C+C
Sbjct: 1973 CSGNGDPNMIFSDCDPLT-----GACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRCDC 2027
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNC 118
+P G+ S GRC CK GVTG +CDRC ++ F + GC+ C C PA C
Sbjct: 2028 SPCGTETCDPQS-GRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGSE---C 2083
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCKRDTYPLGHGGSLNL 176
GQC H + + + A W L + C+R P GH
Sbjct: 2084 HPQSGQC-----------HCQPGTTGPQCLECAPG-YWGLPEKGCRRCQCPRGH------ 2125
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNH 202
C+ G C C PG++G++CD C H
Sbjct: 2126 -CDPHTGHCTCPPGLSGERCDTCSQQH 2151
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C+C+P V G +CD C Y G C+ C+C+ AG++ + CD + GQC CK+NV+
Sbjct: 1553 GQCRCRPNVAGRRCDTCAPGFY--GYPSCRPCDCHEAGTMASV--CDPLTGQCHCKENVQ 1608
Query: 242 GAQC 245
G++C
Sbjct: 1609 GSRC 1612
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 92/232 (39%), Gaps = 44/232 (18%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTA-----CNCNPIGSLNLQCNSE---GRCQCKPG 80
+G D P+C + + + A C+CN G+ C + GRC CKP
Sbjct: 467 AEGYTDFPHCYPLPSFPHNDTREQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRCVCKPN 526
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G C+ C F C C+C+ G + CD GQC
Sbjct: 527 FRGAHCELCAPG---FHGPSCHPCQCSSPGVANSL--CDPESGQC--------------- 566
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPL------GHGGSLNLQCNSEGRCQCKPGVTGDK 194
R F+ G+R D +PL G+L C+ GRCQC+PG G
Sbjct: 567 --MCRTGFE--GDRC-DHCALGYFHFPLCQLCGCSPAGTLPEGCDEAGRCQCRPGFDGPH 621
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CDRC ++ + + C +C C+P G++ C V G C C+ GA C+
Sbjct: 622 CDRCLPGYHGYPD--CHACACDPRGALDQ--QC-GVGGLCHCRPGYTGATCQ 668
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEGRCQCKPGVTGD 84
C+ +GP+C++C+ Y+ S N CT C+C+P G+L +C G+C CK V G
Sbjct: 752 CRAHVEGPSCDRCKPGYWGLSASNPEGCTRCSCDPRGTLGGVTECQGNGQCFCKAHVCGK 811
Query: 85 KCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
C C + A GC+SC C+ G++
Sbjct: 812 TCAACKDGFFGLDYADYFGCRSCRCDVGGAL 842
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG TG +C C ++ E GC+ C+C P G +CD G C C +
Sbjct: 2088 GQCHCQPGTTGPQCLECAPGYWGLPEKGCRRCQC-PRG------HCDPHTGHCTCPPGLS 2140
Query: 242 GAQC 245
G +C
Sbjct: 2141 GERC 2144
Score = 37.7 bits (86), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C+ C +Y G C C+C+ G++ C+ G+C CK V G +CD
Sbjct: 1557 CRPNVAGRRCDTCAPGFY---GYPSCRPCDCHEAGTMASVCDPLTGQCHCKENVQGSRCD 1613
Query: 88 RCDVNHYDFGEAGCKSC 104
+C V + A K C
Sbjct: 1614 QCRVGTFSLDAANPKGC 1630
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 76/207 (36%), Gaps = 51/207 (24%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+G G +C +C Y+ G C C+C L G+C C P
Sbjct: 1459 GGQC-PCRGHVIGRDCSRCATGYW---GFPNCRPCDCG----ARLCDELTGQCICPPRTV 1510
Query: 83 GDKCDRCDVNHYD-FGEAGCKSCECNPAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTEL 140
C C + GC+ C C+ G + T P CD GQC
Sbjct: 1511 PPDCLVCQPQSFGCHPLVGCEECNCSGPGVQELTDPTCDMDSGQC--------------- 1555
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDT-------YPL------GHGGSLNLQCNS-EGRCQC 186
+ R N AG RRC DT YP G++ C+ G+C C
Sbjct: 1556 --RCRPNV--AG------RRC--DTCAPGFYGYPSCRPCDCHEAGTMASVCDPLTGQCHC 1603
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
K V G +CD+C V + A K C
Sbjct: 1604 KENVQGSRCDQCRVGTFSLDAANPKGC 1630
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 26/185 (14%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL---QCNSEGRCQCKPGVTGDK 85
C+ G +C+ C Y +C A +C+P G ++ C C+ V G
Sbjct: 704 CRPRVTGLHCDMCVPGAYNFP---YCEAGSCHPAGLAPANPALPETQAPCMCRAHVEGPS 760
Query: 86 CDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
CDRC ++ + GC C C+P G++ C GQC + V +
Sbjct: 761 CDRCKPGYWGLSASNPEGCTRCSCDPRGTLGGVTECQG-NGQC-----FCKAHVCGKTCA 814
Query: 143 QSRKNFDPAGNRIWDL---RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
+ F G D R C+ D GG+L C + G C+C+P G C
Sbjct: 815 ACKDGF--FGLDYADYFGCRSCRCDV-----GGALGQGCEPKTGACRCRPNTQGPTCSEP 867
Query: 199 DVNHY 203
+HY
Sbjct: 868 AKDHY 872
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 14/123 (11%)
Query: 35 GPNCEKCRDNYY-QKSGDNF-CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 91
G C C+D ++ D F C +C C+ G+L C + G C+C+P G C
Sbjct: 810 GKTCAACKDGFFGLDYADYFGCRSCRCDVGGALGQGCEPKTGACRCRPNTQGPTCSEPAK 869
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVK---GQCESAQLSSRGRVH---TELRVQSR 145
+HY + E A TP +V+ E S RG H + R+ +R
Sbjct: 870 DHY-LPDLHHMRLELEEAA----TPEGHAVRFGFNPLEFENFSWRGYAHMMAIQPRIVAR 924
Query: 146 KNF 148
N
Sbjct: 925 LNV 927
>sp|P02469|LAMB1_MOUSE Laminin subunit beta-1 OS=Mus musculus GN=Lamb1 PE=1 SV=3
Length = 1786
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 335 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 394
Query: 54 CTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P GS N G+C+CK V G++CD C YD G
Sbjct: 395 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYG 454
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
CKSC CNP G++ CDS G C +L + R Q N + R
Sbjct: 455 CKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-----QCLPQHWGLSNDLDGCRP 509
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C D GG+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 510 CDCDL-----GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 548
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 109/292 (37%), Gaps = 80/292 (27%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-------------------QKSGDNFCTACNCNPIGS 64
G CL CQ G NCE+C YY SG F +C +P+ +
Sbjct: 881 GECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPV-T 939
Query: 65 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDS 120
L L C C PG G +CD C + DFG C+ C+C+ + CD
Sbjct: 940 LQLA------CVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDK 992
Query: 121 VKGQC---------ESAQLSSRGRVHTELRVQSRK---NF---------------DPAG- 152
G+C + QL G LR RK N+ D A
Sbjct: 993 ETGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVKEHCNGSDCHCDKATG 1052
Query: 153 ------NRI-WDLRRCKRDTYPLGHGG-----------SLNLQCNS-EGRCQCKPGVTGD 193
N I + RC +T+ L G S CN G+CQC PG G
Sbjct: 1053 QCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCNCNAAHSFGPSCNEFTGQCQCMPGFGGR 1112
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1113 TCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1162
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG GCK C+C+ GS + CD++ GQC
Sbjct: 810 TFGFGPNGCKPCDCHLQGSA--SAFCDAITGQC 840
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GS + CD++
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSA--SAFCDAI 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 837 TGQCHCFQGIYARQC 851
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 30/238 (12%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G N C C+C+ GS + C++ G+C C G+
Sbjct: 789 GGQC-QCRPNVVGRTCNRCAPGTF-GFGPNGCKPCDCHLQGSASAFCDAITGQCHCFQGI 846
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+CDRC ++ F C+ C+CN + +CD+V G+C S Q + G H R
Sbjct: 847 YARQCDRCLPGYWGF--PSCQPCQCN-----GHALDCDTVTGECLSCQDYTTG--HNCER 897
Query: 142 VQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ DP R C R + + LQ C C PG G
Sbjct: 898 CLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQL----ACVCDPGYIGS 953
Query: 194 KCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+CD C + DFG C+ C+C+ + CD G+C +C + EG C+
Sbjct: 954 RCDDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQ 1010
Score = 31.6 bits (70), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CEC+P GS+ + CD GQC+C+ NV G C
Sbjct: 772 ACECDPQGSLSSV--CDPNGGQCQCRPNVVGRTC 803
>sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8
Length = 3695
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG T
Sbjct: 602 AGRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYT 657
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR- 141
G C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 658 GTACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC 707
Query: 142 ---VQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
V NF C+ + +P G ++ C C+ V G CDR
Sbjct: 708 DTCVPGAYNFP----------YCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDR 757
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C + + GC C C+ G++ C GQC CK +V G C S
Sbjct: 758 CKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 810
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1864 CQCHGHSDRCLPGS---------GVCVDCQHNTEGAHCERCQAGFVSSRDDPSAPCVSCP 1914
Query: 59 CN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPA 109
C P + C G +C CKPG G C+RC + + C+ C+C+
Sbjct: 1915 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGN 1974
Query: 110 GSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
G +CD + G C + G N GN C R D P
Sbjct: 1975 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGN-------CTRCDCTP 2027
Query: 168 LGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 225
G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2028 CGTEA-----CDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS--- 2079
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2080 ECHPQSGQCHCRPGTMGPQCR 2100
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 80/210 (38%), Gaps = 39/210 (18%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACNC 59
C+ NG N F D + G C C GP CE C +Y + CT C+C
Sbjct: 1971 CSGNGDPNLLFSDCDPLT-----GACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC 2025
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNC 118
P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA C
Sbjct: 2026 TPCGTEACDPHS-GHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---C 2081
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC 178
GQC G R C + L G QC
Sbjct: 2082 HPQSGQCHCR----------------------PGTMGPQCRECAPGYWGLPEQGCRRCQC 2119
Query: 179 NS------EGRCQCKPGVTGDKCDRCDVNH 202
GRC C PG++G++CD C H
Sbjct: 2120 PGGRCDPHTGRCNCPPGLSGERCDTCSQQH 2149
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+ +G+ C G +C C V G C RC ++ F C+ C+C
Sbjct: 1438 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF--PNCRPCDCG-------A 1488
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PL---- 168
CD + GQC + + P D C+ T+ PL
Sbjct: 1489 RLCDELTGQC----------------ICPPRTIPP------DCLLCQPQTFGCHPLVGCE 1526
Query: 169 -------GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
G + C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+
Sbjct: 1527 ECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGT 1584
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD + GQC CK+NV+G +C
Sbjct: 1585 APGV--CDPLTGQCYCKENVQGPKC 1607
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G CDR
Sbjct: 562 CRVGFEGATCDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDR 618
Query: 89 CDVNHYDFGEAGCKSCECNPAGSV 112
C ++ F C++C C+P G++
Sbjct: 619 CRPGYHGF--PNCQACTCDPRGAL 640
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 43/201 (21%)
Query: 57 CNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C+C+ G+ C + GRC CKP G C+ C Y GC+ C+C+ G
Sbjct: 494 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVAD 550
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--PL--- 168
+ CD GQC + R F+ A RC + PL
Sbjct: 551 D--RCDPDTGQC-----------------RCRVGFEGA-----TCDRCAPGYFHFPLCQL 586
Query: 169 ---GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
G+L C+ GRC C+P G CDRC ++ F C++C C+P G++
Sbjct: 587 CGCSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGF--PNCQACTCDPRGALDQL- 643
Query: 226 NCDSVKGQCECKDNVEGAQCR 246
C + G C C+ G C+
Sbjct: 644 -CGA-GGLCRCRPGYTGTACQ 662
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNS-EGRCQCKPGVTG 83
C+ +GP+C++C+ ++ S N CT C+C+ G+L +C G+C CKP V G
Sbjct: 746 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 805
Query: 84 DKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C C + +A GC+SC C+ G++ + C+ G C
Sbjct: 806 QACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CEPRTGVC 848
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+PG G +C C ++ E GC+ C+C P G CD G+C C +
Sbjct: 2086 GQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGRCNCPPGLS 2138
Query: 242 GAQC 245
G +C
Sbjct: 2139 GERC 2142
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 18/82 (21%)
Query: 182 GRCQCKPGVTGDKCDRC------------------DVNHYDFGEAGCKSCECNPAGSVKN 223
GRC C+P +G++CD C D +C+C+ AG+ N
Sbjct: 445 GRCYCRPNFSGERCDVCAEGFTGFPSCYPTPSSSNDTREQVLPAGQIVNCDCSAAGTQGN 504
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
D G+C CK N +G C
Sbjct: 505 ACRKDPRVGRCLCKPNFQGTHC 526
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCD 87
C+ + G C+ C ++ G C C+C+ G+ C+ G+C CK V G KCD
Sbjct: 1552 CRPNVTGRRCDTCSPGFH---GYPRCRPCDCHEAGTAPGVCDPLTGQCYCKENVQGPKCD 1608
Query: 88 RCDVNHYDFGEAGCKSC 104
+C + + A K C
Sbjct: 1609 QCSLGTFSLDAANPKGC 1625
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 35 GPNCEKCRDNYY-QKSGDNF-CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 91
G C C+D ++ D F C +C C+ G+L C G C+C+P G C
Sbjct: 805 GQACASCKDGFFGLDQADYFGCRSCRCDIGGALGQSCEPRTGVCRCRPNTQGPTCSEPAR 864
Query: 92 NHY 94
+HY
Sbjct: 865 DHY 867
>sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens GN=LAMA1 PE=1 SV=2
Length = 3075
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 104/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C G+ DG +CE+C D +Y GD C AC C+ GS + C+ E G C CK
Sbjct: 868 GECLKCLGNTDGAHCERCADGFY---GDAVTAKNCRACECHVKGSHSAVCHLETGLCDCK 924
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC+ C C+ AGSV + C +GQC
Sbjct: 925 PNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--GCTD-EGQCHCVP-------- 973
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-------SLNLQCNSE-GRCQCKPG 189
AG R RC Y G C+ E G C C P
Sbjct: 974 -----------GVAGKRC---DRCAHGFYAYQDGSCTPCDCPHTQNTCDPETGECVCPPH 1019
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ H+ + E GC++C C+ GS + CD V G C+CK G C
Sbjct: 1020 TQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHH--RCDVVTGHCQCKSKFGGRAC 1074
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D K+ N G GG C++C + G NCE C D YY+
Sbjct: 327 CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETCIDGYYRPHKV 386
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D C CNC+P+GSL+ C + G+C CK G TG+KCDRC + +
Sbjct: 387 SPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLHNGKQPGQCPCKEGYTGEKCDRCQLGYK 446
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
D+ C SC CNP GS + P
Sbjct: 447 DY--PTCVSCGCNPVGSASDEP 466
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C CK G TG+KCDRC + + D+ C SC CNP GS + P G C CK+NVE
Sbjct: 425 GQCPCKEGYTGEKCDRCQLGYKDY--PTCVSCGCNPVGSASDEP----CTGPCVCKENVE 478
Query: 242 GAQC 245
G C
Sbjct: 479 GKAC 482
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C G CE+C D ++ + C ACNC+ +GS + +C+ G CQCK
Sbjct: 1012 GECV-CPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGHCQCKSKFG 1070
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
G CD+C + + DF + C C+C+ G+
Sbjct: 1071 GRACDQCSLGYRDFPD--CVPCDCDLRGT 1097
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNFCTACNCNPIGSLN-------LQCNS 71
G C+ C + G +CE+C +Y + GD C C C + N L
Sbjct: 755 GVCIACAHNTTGVHCEQCLPGFYGEPSRGTPGD--CQPCACPLTIASNNFSPTCHLNDGD 812
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
E C C PG +G C+RC +Y C C+C+ +CDSV G+C
Sbjct: 813 EVVCDWCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPSEAGHCDSVTGECLK 872
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
++ G H E + F + R C+ GS + C+ E G C C
Sbjct: 873 CLGNTDG-AHCE---RCADGFYGDAVTAKNCRACECHV-----KGSHSAVCHLETGLCDC 923
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KP VTG +CD+C +Y GC+ C C+ AGSV + C +GQC C V G +C
Sbjct: 924 KPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD--GCTD-EGQCHCVPGVAGKRC 980
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQC 77
H C C +G +CE+C +YY Q G + C C+CNP GS++ C+ + G+C C
Sbjct: 1472 HDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGS-CQKCDCNPHGSVHGDCDRTSGQCVC 1530
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+ G +G +CD C+ H E C SC+ G + N
Sbjct: 1531 RLGASGLRCDECEPRHI-LMETDCVSCDDECVGVLLN 1566
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQCNSEG----RC 75
G CL+C + G +C+ C YY K + D AC +P S + C EG RC
Sbjct: 1417 GKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPASFSPTCVLEGDHDFRC 1476
Query: 76 -QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C G G C+RC ++Y + C+ C+CNP GSV +CD GQC
Sbjct: 1477 DACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTSGQC 1528
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 176 LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVK 231
L+ + + RC C G G C+RC ++Y + C+ C+CNP GSV +CD
Sbjct: 1468 LEGDHDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTS 1525
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 1526 GQCVCRLGASGLRC 1539
Score = 37.7 bits (86), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQC 234
G CQCK G CD+C + + DF + C C+C+ G+ + N C G C
Sbjct: 1061 GHCQCKSKFGGRACDQCSLGYRDFPD--CVPCDCDLRGTSGDACNLEQGLCGCVEETGAC 1118
Query: 235 ECKDNVEGAQC 245
CK+NV G QC
Sbjct: 1119 PCKENVFGPQC 1129
Score = 37.7 bits (86), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNSEGRCQCKPGVTGDKCD 87
C+ G C++C+ Y C +C CNP+GS + + C G C CK V G CD
Sbjct: 429 CKEGYTGEKCDRCQLGYKDYPT---CVSCGCNPVGSASDEPCT--GPCVCKENVEGKACD 483
Query: 88 RCDVNHYDFGEA---GCKSCEC 106
RC Y+ E GC C C
Sbjct: 484 RCKPGFYNLKEKNPRGCSECFC 505
>sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens GN=LAMB4 PE=2 SV=1
Length = 1761
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLN----------LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C C+P G+++ + G+C CK V G KCD+C NHY G
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CNP GS+ CD GQC LS H E + + GN +
Sbjct: 452 CQPCDCNPLGSLPFL-TCDVDTGQCLC--LSYVTGAHCE---ECTVGYWGLGNHLHGCSP 505
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
C D GG+ + C+ + G+C+C+P VTG C
Sbjct: 506 CDCDI-----GGAYSNVCSPKNGQCECRPHVTGRSC 536
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 107/277 (38%), Gaps = 87/277 (31%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C CNG ++ C ++++ G G C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECRPMQKMRGDVFSPPGMVHGQCV-CQHNTDGPNCERCKD-FFQDAPWRPAA 322
Query: 51 ---DNFCTACNCNPIGS---------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY--- 94
DN C +C+CN S L S G C+ C+ G CDRC Y
Sbjct: 323 DLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDP 382
Query: 95 ---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C CEC+P G++ G C S + DPA
Sbjct: 383 LKTISDPYACIPCECDPDGTISG--------GICVS-------------------HSDPA 415
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA--- 208
+ G+C CK V G KCD+C NHY
Sbjct: 416 LGSV-------------------------AGQCLCKENVEGAKCDQCKPNHYGLSATDPL 450
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C+CNP GS+ CD GQC C V GA C
Sbjct: 451 GCQPCDCNPLGSLPFL-TCDVDTGQCLCLSYVTGAHC 486
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 90/233 (38%), Gaps = 74/233 (31%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS----------EG 73
G CL C + G NC+ C+ +Y + + C C+C+ G ++C G
Sbjct: 989 GECLRCLHNTQGANCQLCKPGHYGSALNQTCRRCSCHASGVSPMECPPGGGACLCDPVTG 1048
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C C P VTG CDRC +++ GC+SC+C+P S + +CD + GQC
Sbjct: 1049 ACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS--QSSHCDQLTGQCP------ 1100
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
CK LG+GG
Sbjct: 1101 ----------------------------CK-----LGYGGK------------------- 1108
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C N+Y C C+CN AG+ K P CD G C C++ V G +C
Sbjct: 1109 -RCSECQENYYGDPPGRCIPCDCNRAGTQK--PICDPDTGMCRCREGVSGQRC 1158
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN F+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CPCNRFAELC--DPE-------TGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNLQ---------CNSEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECN 107
S N +S+ C C G TG +C C Y A C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTQG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 1028
Query: 165 TYPL--GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
P+ GG L G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1029 VSPMECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS- 1087
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD + GQC CK G +C
Sbjct: 1088 -QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G +CQCKP V G CDRC YD
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G GC C C+P GS CD V GQC
Sbjct: 810 GHHGCHPCHCHPQGSKDTV--CDQVTGQC 836
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+CQCKP V G CDRC YD G GC C C+P GS CD V GQC C V
Sbjct: 786 GQCQCKPLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQGSKDTV--CDQVTGQCPCHGEVS 843
Query: 242 GAQC 245
G +C
Sbjct: 844 GRRC 847
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 72/191 (37%), Gaps = 37/191 (19%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G+C C V+G +CDRC + FG C C CN + CD G C + +
Sbjct: 834 GQCPCHGEVSGRRCDRCLAGY--FGFPSCHPCPCNRFAEL-----CDPETGSCFNCGGFT 886
Query: 133 RGR-----VHTELRVQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GR + S DP+ N+ + H NL +
Sbjct: 887 TGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQYF------------AHSCYQNLW-S 933
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-E 235
S+ C C G TG +C C Y A C+ C CN V + +C V G+C
Sbjct: 934 SDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLR 993
Query: 236 CKDNVEGAQCR 246
C N +GA C+
Sbjct: 994 CLHNTQGANCQ 1004
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
P V C+R ++ G +C+C+P GSV ++ C + GQC+CK V G
Sbjct: 744 PQVLPGACERLIISMSAKLHDGAVACKCHPQGSVGSS--CSRLGGQCQCKPLVVG 796
>sp|Q61789|LAMA3_MOUSE Laminin subunit alpha-3 OS=Mus musculus GN=Lama3 PE=1 SV=3
Length = 3333
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 110/239 (46%), Gaps = 46/239 (19%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR Y C AC C+ IGS + C+ G+C C PG+T
Sbjct: 504 GRCL-CRPGVEGPQCDSCRSGSYSFP---ICQACQCSTIGSYPVPCDPGNGQCDCLPGIT 559
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG--QCESAQLSSRGRVHTEL 140
G +CDRC YDF C+PAG++ DS G QC+ S V L
Sbjct: 560 GRQCDRCLSGAYDFPYCQGSGSVCHPAGTL------DSSLGYCQCKQHVASPTCSVCKPL 613
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLG-------HGGSLNL--QCNSE-GRCQCKPGV 190
W+L + P G G+L+ +C E G C CK V
Sbjct: 614 --------------YWNLAKEN----PRGCSECQCHEAGTLSGIGECGQEDGDCSCKAHV 655
Query: 191 TGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
TGD CD C+ + ++ GC+ C+C+ G++ T C G C+C+++VEG QC+
Sbjct: 656 TGDACDTCEDGFFSLEKSNYFGCQGCQCDIGGAL--TTMCSGPSGVCQCREHVEGKQCQ 712
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 110/265 (41%), Gaps = 74/265 (27%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D ++ ++ GG C++CQ + G NCEKC Y++ G
Sbjct: 353 CNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYFRPHGV 412
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P + + S G C CKP +GD C+ C +Y+F
Sbjct: 413 PVDALHGCIPCSCDPERADDCDQGS-GHCHCKPNFSGDYCETCADGYYNF---------- 461
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP------AGNRIWDLRR 160
P C LR+ N+ P AGN ++
Sbjct: 462 ---------PFC---------------------LRIPVFPNYTPSPEDPVAGN----IKG 487
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
C + G L C+ GRC C+PGV G +CD C Y F C++C+C+ GS
Sbjct: 488 CDCNL-----EGVLPEICDDRGRCLCRPGVEGPQCDSCRSGSYSF--PICQACQCSTIGS 540
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
CD GQC+C + G QC
Sbjct: 541 YPVP--CDPGNGQCDCLPGITGRQC 563
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC G C++CQ + G +CE+C+ +Y + C C C
Sbjct: 1687 CNCNGHSNRC---------QDGSGICINCQHNTAGEHCERCQAGHYGNAIHGSCRVCPCP 1737
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVK 113
S C +G RC CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1738 HTNSFATGCAVDGGAVRCACKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLG 1796
Query: 114 NTPNCDSVKGQC 125
CD + G C
Sbjct: 1797 ---PCDPLTGDC 1805
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 79/213 (37%), Gaps = 69/213 (32%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
G + R YY G +C CNC L G+C C P +C+ C++N +
Sbjct: 1291 GASAAAVRQGYY---GFPYCKPCNCG----RRLCEEVTGKCLCPPHTVRPQCEVCEMNSF 1343
Query: 95 DFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
+F AGC C C S KG E+A
Sbjct: 1344 NFHPVAGCDVCNC-------------SRKGTIEAA------------------------- 1365
Query: 154 RIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
+ C RD+ G+C+CKP VTG +CD+C C C
Sbjct: 1366 ----VSECDRDS----------------GQCRCKPRVTGQQCDKCAPGLLPV-PLKCVPC 1404
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CN G+ + CD G C CK+NVEG QC+
Sbjct: 1405 SCNRDGTEPSV--CDPETGACMCKENVEGPQCQ 1435
Score = 38.1 bits (87), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C+ G C+ C D ++ N+ C C C+ G+L C+ G CQC+ V G +
Sbjct: 651 CKAHVTGDACDTCEDGFFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGVCQCREHVEGKQ 710
Query: 86 CDRCDVNHY 94
C R + N+Y
Sbjct: 711 CQRPENNYY 719
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 167 PLGHGGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAG 219
P H S C +G RC CKPG TG +C+RC ++ FG C+ C CN G
Sbjct: 1735 PCPHTNSFATGCAVDGGAVRCACKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNG 1793
Query: 220 SVKNTPNCDSVKGQC---ECKDNVEGAQC 245
+ CD + G C E KD +C
Sbjct: 1794 QLG---PCDPLTGDCVNQEPKDGSPAEEC 1819
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 78/193 (40%), Gaps = 43/193 (22%)
Query: 28 DCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
DC G C++C Y Q SG C+P G+L+ +S G CQCK V
Sbjct: 553 DCLPGITGRQCDRCLSGAYDFPYCQGSGSV------CHPAGTLD---SSLGYCQCKQHVA 603
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLS------- 131
C C +++ + GC C+C+ AG++ C G C A ++
Sbjct: 604 SPTCSVCKPLYWNLAKENPRGCSECQCHEAGTLSGIGECGQEDGDCSCKAHVTGDACDTC 663
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
G E + N+ + + C+ D GG+L C+ G CQC+ V
Sbjct: 664 EDGFFSLE-----KSNY-------FGCQGCQCDI-----GGALTTMCSGPSGVCQCREHV 706
Query: 191 TGDKCDRCDVNHY 203
G +C R + N+Y
Sbjct: 707 EGKQCQRPENNYY 719
>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis elegans GN=epi-1 PE=1
SV=1
Length = 3672
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C G+ G C+KC +Y C C C G+ C+S G+C CK G++CDR
Sbjct: 631 CNGNFTGRTCDKCAAGFYNYPD---CRGCECLLSGAKGQTCDSNGQCYCKGNFEGERCDR 687
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRKN 147
C N Y+F C+ C CNP+G ++ CD V G+ S + GR+
Sbjct: 688 CKPNFYNF--PICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRI----------- 734
Query: 148 FDPAGNRIWDLRRCKRDT------YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
D WDL+ D G LN G+C CK G +CD+C
Sbjct: 735 CDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRCDQCADG 794
Query: 202 HY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y + + GC+SC C+ G+++ CD GQC+C+ V G +C
Sbjct: 795 FYRLNSYNQMGCESCHCDIGGALR--AECDITSGQCKCRPRVTGLRC 839
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 113/259 (43%), Gaps = 35/259 (13%)
Query: 1 CNCNGFSNRCFFDKEL-YNRTGH--------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC G SN C +D E+ N+ GG C +C+ + +G NC KC Y++ G
Sbjct: 357 CNCFGRSNECEYDAEVDLNKQSIDSQGNYEGGGVCKNCRENTEGVNCNKCSFGYFRPEGV 416
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+C+P G+C+C P G+ CD+C +YD CK CEC
Sbjct: 417 TWNEPQPCKVCDCDPDKHTGACAEETGKCECLPRFVGEDCDQCASGYYD--APKCKPCEC 474
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
N G++ + C GQC + G E N AG C D
Sbjct: 475 NVNGTIGDV--CLPEDGQCPCK--AGFGGTFCETCADGYTNVT-AG-----CVECVCDAT 524
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
HG S G+C+CKP G CD+C V + FG+ CK C C+P G+
Sbjct: 525 GSEHGNC----SASTGQCECKPAYAGLSCDKCQVGY--FGD-DCKFCNCDPMGTEGGV-- 575
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD GQC CK+ G +C
Sbjct: 576 CDQTTGQCLCKEGFAGDKC 594
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 99/200 (49%), Gaps = 35/200 (17%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
+C+C GS + QC G +C+CKPGV G +C+RC +Y+F E C C+CN AG
Sbjct: 1414 SCDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYNFPE--CIKCQCN-AGQ--- 1467
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELR-----VQSRKNFDPAGNRIWDLRRCKR-DTYPL 168
CD GQC H E + V + +DP L C++ +P
Sbjct: 1468 --QCDERTGQCFCPP-------HVEGQTCDRCVSNAFGYDP-------LIGCQKCGCHPQ 1511
Query: 169 GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
G G NL C+ E G+C C+ + G +CDRC Y F C C CN AG+ + C
Sbjct: 1512 GSEGG-NLVCDPESGQCLCRESMGGRQCDRCLAGFYGFPH--CYGCSCNRAGTTEEI--C 1566
Query: 228 DSVKGQCECKDNVEGAQCRS 247
D+ QC+CK+NV G +C +
Sbjct: 1567 DATNAQCKCKENVYGGRCEA 1586
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 91/199 (45%), Gaps = 51/199 (25%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQ----CNSEGRCQCKPGV 81
C+G+ +G C++C+ N+Y NF C CNCNP G + + Q + C C+ V
Sbjct: 676 CKGNFEGERCDRCKPNFY-----NFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKHV 730
Query: 82 TGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TG CD+C +D E GC+SC+CN G++ CD GQC
Sbjct: 731 TGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQC------------- 777
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-------------GGSLNLQCN-SEGRC 184
+KN D G R +C Y L GG+L +C+ + G+C
Sbjct: 778 ----MCKKNAD--GRR---CDQCADGFYRLNSYNQMGCESCHCDIGGALRAECDITSGQC 828
Query: 185 QCKPGVTGDKCDRCDVNHY 203
+C+P VTG +CD+ NHY
Sbjct: 829 KCRPRVTGLRCDQPIENHY 847
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 112/282 (39%), Gaps = 80/282 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS----------- 49
C CNG S C D G C DC+ + +G +CE C + +Y +
Sbjct: 1830 CECNGHSATCDPDT---------GICTDCEHNTNGDHCEFCNEGHYGNATNGSPYDCMAC 1880
Query: 50 ------GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCD---VNHYDFGEAG 100
+NF +C+ + G L LQCN CKPG TGD+CDRC H
Sbjct: 1881 ACPFAPTNNFAKSCDVSEEGQL-LQCN------CKPGYTGDRCDRCASGFFGHPQISGES 1933
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C C+CN ++ ++ +C G C + ++ GR H E
Sbjct: 1934 CSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGR-HCE--------------------S 1972
Query: 161 CKRDTYPLGHGGSLNL---------QCNSE------GRCQCKPGVTGDKCDRCDVNHYDF 205
C Y G ++ QC S+ G C+CK V GD CDRC +H+ F
Sbjct: 1973 CAAWFY----GDAVTAKNCSSCECSQCGSQYCDNKSGGCECKINVEGDSCDRCKPDHWGF 2028
Query: 206 GE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ GC+ C C G+ C+ GQC C+ G +C
Sbjct: 2029 SKCQGCQGCHC---GTAAFNTQCNVENGQCTCRPGATGMRCE 2067
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 107/239 (44%), Gaps = 48/239 (20%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ G C++C +Y G C AC C+ G + +C+ + G+C C T
Sbjct: 581 GQCL-CKEGFAGDKCDRCDIAFY---GYPNCKACACDGAGITSPECDATSGQCPCNGNFT 636
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C Y++ + C+ CEC +G+ T CDS GQC
Sbjct: 637 GRTCDKCAAGFYNYPD--CRGCECLLSGAKGQT--CDS-NGQC----------------- 674
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTY--PL-------GHGGSLNLQ----CNSEGRCQCKPG 189
+ NF+ G R RCK + Y P+ G + + Q + C C+
Sbjct: 675 YCKGNFE--GER---CDRCKPNFYNFPICEECNCNPSGVTRDFQGCDKVSPGELCSCRKH 729
Query: 190 VTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG CD+C +D E GC+SC+CN G++ CD GQC CK N +G +C
Sbjct: 730 VTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRC 788
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKC 86
+C+ + +G +C++C+ +++ S C C+C + N QCN E G+C C+PG TG +C
Sbjct: 2008 ECKINVEGDSCDRCKPDHWGFSKCQGCQGCHCG-TAAFNTQCNVENGQCTCRPGATGMRC 2066
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ C+ ++++GE GC C+C S+ CD GQC
Sbjct: 2067 EHCEHGYWNYGEHGCDKCDCEADLSMGTV--CDVRTGQC 2103
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
+ N QCN E G+C C+PG TG +C+ C+ ++++GE GC C+C S+ CD
Sbjct: 2042 AAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTV--CDVR 2099
Query: 231 KGQCECKDNVEGAQC 245
GQC C++ G++C
Sbjct: 2100 TGQCHCQEGATGSRC 2114
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 45/207 (21%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G C C+ + DG +CE C +Y GD C++C C+ GS N G C+CK
Sbjct: 1956 GDCYLCEQNTDGRHCESCAAWFY---GDAVTAKNCSSCECSQCGSQYCD-NKSGGCECKI 2011
Query: 80 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V GD CDRC +H+ F + GC+ C C G+ C+ GQC ++ R
Sbjct: 2012 NVEGDSCDRCKPDHWGFSKCQGCQGCHC---GTAAFNTQCNVENGQCTCRPGATGMRC-- 2066
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG----------SLNLQCNSE-GRCQCK 187
C+ + G G S+ C+ G+C C+
Sbjct: 2067 --------------------EHCEHGYWNYGEHGCDKCDCEADLSMGTVCDVRTGQCHCQ 2106
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G TG +CD+C ++ GC+ C+
Sbjct: 2107 EGATGSRCDQCLPSYLRIPTYGCRRCD 2133
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPG 80
G C+ C+ + DG C++C D +Y+ + N C +C+C+ G+L +C+ + G+C+C+P
Sbjct: 775 GQCM-CKKNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALRAECDITSGQCKCRPR 833
Query: 81 VTGDKCDRCDVNHY 94
VTG +CD+ NHY
Sbjct: 834 VTGLRCDQPIENHY 847
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 81/210 (38%), Gaps = 48/210 (22%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCK 78
+GG C C+ G CE+C YY NF C C CN QC+ G+C C
Sbjct: 1430 YGGQC-KCKPGVIGRRCERCAPGYY-----NFPECIKCQCNA----GQQCDERTGQCFCP 1479
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P V G CDRC N + + GC+ C C+P GS CD GQC +
Sbjct: 1480 PHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRE-------- 1531
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH--------GGSLNLQCNSE-GRCQCKP 188
G R D RC Y H G+ C++ +C+CK
Sbjct: 1532 ------------SMGGRQCD--RCLAGFYGFPHCYGCSCNRAGTTEEICDATNAQCKCKE 1577
Query: 189 GVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
V G +C+ C +D GC +C C
Sbjct: 1578 NVYGGRCEACKAGTFDLSAENPLGCVNCFC 1607
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCN---PIGSLNLQCNSEGRCQCK 78
G C+ G C++C+ ++ Q ++ C +C+CN I LN G+C CK
Sbjct: 721 GELCSCRKHVTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCK 780
Query: 79 PGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
G +CD+C Y + + GC+SC C+ G+++ CD GQC+
Sbjct: 781 KNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALR--AECDITSGQCK 829
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 84/232 (36%), Gaps = 71/232 (30%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVTG 83
C GP+C+ C Y++ +F C C CN + C+ + G C C+ G
Sbjct: 1799 CPAPYTGPSCQLCASGYHRVQSGSFLGACVPCECN---GHSATCDPDTGICTDCEHNTNG 1855
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
D C+ C+ HY G C +C C A + +CD +S G++
Sbjct: 1856 DHCEFCNEGHYGNATNGSPYDCMACACPFAPTNNFAKSCD----------VSEEGQL--- 1902
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
LQCN CKPG TGD+CDRC
Sbjct: 1903 ------------------------------------LQCN------CKPGYTGDRCDRCA 1920
Query: 200 ---VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQCRS 247
H C C+CN ++ ++ +C G C C+ N +G C S
Sbjct: 1921 SGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCES 1972
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ G CE C Y+ G++ C C+C S+ C+ G+C C+ G TG +CD
Sbjct: 2057 CRPGATGMRCEHCEHGYWNY-GEHGCDKCDCEADLSMGTVCDVRTGQCHCQEGATGSRCD 2115
Query: 88 RCDVNHYDFGEAGCKSC-EC--NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
+C ++ GC+ C EC + G V N V G A +SS V L ++
Sbjct: 2116 QCLPSYLRIPTYGCRRCDECVHHLIGDVDNLELEIDVLGTA-IANISSATIVGARL-ARN 2173
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
+K F+ N I + + +++ G + ++ NS
Sbjct: 2174 KKEFNDI-NEITKMLNDEENSFGNVFGDAQDILTNS 2208
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 92/249 (36%), Gaps = 37/249 (14%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS----LNLQCNSEGRCQCKP 79
GH +D RD P R +Y C CN L Q C+C+
Sbjct: 268 GHLMDMNEWRD-PTV--TRRYFYAIKEIMIGGRCVCNGHAVTCDILEPQRPKSLLCRCEH 324
Query: 80 GVTGDKCDRC-----------DVNHYDFGEAGC----KSCECNPAGSVKNTPNCDSVKGQ 124
GD C+RC H +F C +S EC V +G
Sbjct: 325 NTCGDMCERCCPGFVQKQWQAATAHNNFTCEACNCFGRSNECEYDAEVDLNKQSIDSQGN 384
Query: 125 CESAQLSSRGRVHTELRVQ----SRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN 179
E + R +TE V S F P G + + CK D P H G+ C
Sbjct: 385 YEGGGVCKNCRENTE-GVNCNKCSFGYFRPEGVTWNEPQPCKVCDCDPDKHTGA----CA 439
Query: 180 SE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
E G+C+C P G+ CD+C +YD CK CECN G++ + C GQC CK
Sbjct: 440 EETGKCECLPRFVGEDCDQCASGYYD--APKCKPCECNVNGTIGDV--CLPEDGQCPCKA 495
Query: 239 NVEGAQCRS 247
G C +
Sbjct: 496 GFGGTFCET 504
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
+C + G C C YY C C+C+ GS + CNS+G+C C+P G +CD
Sbjct: 606 NCLNNFAGKQCTLCTAGYYSYPD---CLPCHCDSHGSQGVSCNSDGQCLCQPNFDGRQCD 662
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRVQSRK 146
C Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 663 SCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECK----- 715
Query: 147 NFDPAGNRIWDLRRCKR------DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
W+L D + G +L+ + G+C CKP G +C C
Sbjct: 716 ------PLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 769
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D A GCK C C+ GS ++ CD + GQC+C + G C
Sbjct: 770 GTFDLDSASLFGCKDCSCDVGGSWQSV--CDKISGQCKCHPRITGLAC 815
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 104/260 (40%), Gaps = 74/260 (28%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCN-PIGSLNL-------QCNSE 72
G C CQ +G +CE+C YY + + C C C P S N + +
Sbjct: 1823 GICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQ 1882
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+CKPG TG +C+ C Y E+ CK CEC+ + ++ +CD+ G+C
Sbjct: 1883 IHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGSCDTRTGEC---- 1938
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--------PLGHGGSLNLQ-CNS 180
RC +T+ P +G ++ L+ C S
Sbjct: 1939 -----------------------------LRCLNNTFGAACNLCAPGFYGDAIKLKNCQS 1969
Query: 181 --------------EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 225
G C C V GD+CDRC +HY F GC++C+C G+ N+
Sbjct: 1970 CDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNST 2026
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD G C CK V G QC
Sbjct: 2027 QCDPHTGHCACKSGVTGRQC 2046
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 113/270 (41%), Gaps = 56/270 (20%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH----------GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G SN C +D+E+ NR G GG C +CQ + G NC KC+ YY+ G
Sbjct: 333 CNCHGHSNECKYDEEV-NRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKG 391
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
++ C+ C C+ S C E G C+C+ CD C +Y G C+ C
Sbjct: 392 KHWNETDVCSPCQCDYFFSTG-HCEEETGNCECRAAFQPPSCDSCAYGYY--GYPNCREC 448
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN G+ N +C++ GQ +++ G ++C
Sbjct: 449 ECNLNGT--NGYHCEAESGQQCPCKINFAGAY---------------------CKQCAEG 485
Query: 165 TYPLGH--------GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
Y GS+ CN + G C+C GD C+RC H F C C+C
Sbjct: 486 YYGFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERC--KHGYFNYPTCSYCDC 543
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G+ C+ GQC C++ G +C
Sbjct: 544 DNQGTESEI--CNKQSGQCICREGFGGPRC 571
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C P V GD C++C N Y F + GC+ C CNP G CD G CEC+
Sbjct: 1432 TTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ 1491
Query: 239 NVEGAQC 245
N+EG C
Sbjct: 1492 NIEGRAC 1498
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+ C+ G C C
Sbjct: 1936 GECLRCLNNTFGAACNLCAPGFY---GDAIKLKNCQSCDCDDLGTQT--CDPFVGVCTCH 1990
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V GD+CDRC +HY F GC++C+C G+ N+ CD G C + + GR
Sbjct: 1991 ENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNSTQCDPHTGHC-ACKSGVTGR-- 2044
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPL----------GHGGSLNLQCN-SEGRCQC 186
RC D + G S CN + G+CQC
Sbjct: 2045 -------------------QCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQC 2085
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC 213
PGV GD+CD C + GC+ C
Sbjct: 2086 LPGVIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCD 87
C+ + G C++C + YY G C AC CN IGS+ CN + G C+C GD C+
Sbjct: 470 CKINFAGAYCKQCAEGYY---GFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCE 526
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC H F C C+C+ G+ C+ GQC + R L
Sbjct: 527 RC--KHGYFNYPTCSYCDCDNQGTESEI--CNKQSGQCICREGFGGPRCDQCL------- 575
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
P D + C GS + C++ G+C C G +C C +Y + +
Sbjct: 576 --PGFYNYPDCKPCN-----CSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPD 628
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C C+ GS + N D GQC C+ N +G QC S
Sbjct: 629 --CLPCHCDSHGSQGVSCNSD---GQCLCQPNFDGRQCDS 663
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 84/206 (40%), Gaps = 53/206 (25%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNC+ GS + +C+ G +CQCKP V C C +Y F + CK C+C N+
Sbjct: 1375 CNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPD--CKPCKC------PNS 1426
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTY-------- 166
C+ G+C N I DL +C +TY
Sbjct: 1427 AMCEPTTGECMCPP-----------------------NVIGDLCEKCAPNTYGFHQVIGC 1463
Query: 167 ------PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
P+G N QC+ G C+C+ + G CD C +++F C+ C C+ G
Sbjct: 1464 EECACNPMGIANG-NSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPH--CEQCSCHKPG 1520
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD + G C CK NV G C
Sbjct: 1521 TELEV--CDKIDGACFCKKNVVGRDC 1544
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSEG---RCQ 76
G CL CQ + DG C+ C++ +Y NF C CNC+P G ++ C S C+
Sbjct: 648 GQCL-CQPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 701
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK VTG C+ C +++ + GC+ C+C G++ C S GQC + ++
Sbjct: 702 CKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQC-PCKPHTQ 760
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R FD ++ + C D GGS C+ G+C+C P +TG
Sbjct: 761 GRRCQECR---DGTFDLDSASLFGCKDCSCDV-----GGSWQSVCDKISGQCKCHPRITG 812
Query: 193 DKCDRCDVNHY 203
C + H+
Sbjct: 813 LACTQPLTTHF 823
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + C CR YY G C C C P ++ C + G C C P V
Sbjct: 1391 GGQC-QCKPNVIERTCGACRSRYY---GFPDCKPCKC-PNSAM---CEPTTGECMCPPNV 1442
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
GD C++C N Y F + GC+ C CNP G CD G CE Q + GR
Sbjct: 1443 IGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQ-NIEGRA---- 1497
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDT--YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
D N ++ C++ + P G L + +G C CK V G CD+C
Sbjct: 1498 -------CDVCSNGYFNFPHCEQCSCHKP---GTELEVCDKIDGACFCKKNVVGRDCDQC 1547
Query: 199 DVNHYDFGEA---GCKSCEC 215
Y+ E+ GC +C C
Sbjct: 1548 VDGTYNLQESNPDGCTTCFC 1567
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
H GHC C+ G C++C ++++ D CT CNCN S CN + G+CQC PG
Sbjct: 2031 HTGHCA-CKSGVTGRQCDRCAVDHWKYEKDG-CTPCNCNQGYSRGFGCNPNTGKCQCLPG 2088
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSC 104
V GD+CD C + GC+ C
Sbjct: 2089 VIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 41 CRDNYYQKS-----GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY- 94
R NY++++ D + T + + G+ Q + RC C PG +G C+ C +Y
Sbjct: 1737 IRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYR 1796
Query: 95 -DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
G G C CECN ++ CD G C Q + G H E R S +
Sbjct: 1797 DPSGPYGGYCIPCECN-----GHSETCDCATGICSKCQHGTEGD-HCE-RCVSGYYGNAT 1849
Query: 152 GNRIWDLRRCK----RDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
D C D+ ++ + + C+CKPG TG +C+ C Y E
Sbjct: 1850 NGTPGDCMICACPLPFDSNNFATSCEIS-ESGDQIHCECKPGYTGPRCESCANGFYGEPE 1908
Query: 208 A---GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+ CK CEC+ + ++ +CD+ G+C C +N GA C
Sbjct: 1909 SIGQVCKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAAC 1950
Score = 37.7 bits (86), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNV 240
G C+C+ CD C +Y G C+ CECN G+ N +C++ GQ C CK N
Sbjct: 419 GNCECRAAFQPPSCDSCAYGYY--GYPNCRECECNLNGT--NGYHCEAESGQQCPCKINF 474
Query: 241 EGAQCR 246
GA C+
Sbjct: 475 AGAYCK 480
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 20 TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNS-EGRCQ 76
T G C C+ G C++CRD + + C C+C+ GS C+ G+C+
Sbjct: 747 TSKSGQC-PCKPHTQGRRCQECRDGTFDLDSASLFGCKDCSCDVGGSWQSVCDKISGQCK 805
Query: 77 CKPGVTGDKCDRCDVNHY 94
C P +TG C + H+
Sbjct: 806 CHPRITGLACTQPLTTHF 823
>sp|O75445|USH2A_HUMAN Usherin OS=Homo sapiens GN=USH2A PE=1 SV=3
Length = 5202
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 56/249 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + N+Y + ++F C CNC+ G++N L CN S G+C CK
Sbjct: 813 GQCI-CKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCNKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQC---------- 920
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR--DTYPLGHG-------------GSLNLQCNS 180
L V +R+ RRC + + + G G++N CNS
Sbjct: 921 ----LCVPNRQG-----------RRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNS 965
Query: 181 -EGRCQCK-PGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ + G +CD+C +++ F C+ C C+ +G++ T C V GQC C
Sbjct: 966 LTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFC 1023
Query: 237 KDNVEGAQC 245
K V G++C
Sbjct: 1024 KQFVTGSKC 1032
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 109/233 (46%), Gaps = 34/233 (14%)
Query: 29 CQGDRDGPNCEKCRD--NYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDK 85
C+ + G C+ C + + D C C CN GS+N CN G+C+CK G +
Sbjct: 717 CKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQ 776
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
CD C N Y CK+C+C+ AGS+ T C++ GQC V+ R
Sbjct: 777 CDTCRENFYGLDVTNCKACDCDTAGSLPGT-VCNAKTGQCICKP-----------NVEGR 824
Query: 146 K-------NFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKPGVTGDKC 195
+ NF N + C D G++N L CN S G+C CK GVTG +C
Sbjct: 825 QCNKCLEGNFYLRQNNSFLCLPCNCD-----KTGTINGSLLCNKSTGQCPCKLGVTGLRC 879
Query: 196 DRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C+ + Y+ C+ CEC+ G++ T CD + GQC C N +G +C
Sbjct: 880 NQCEPHRYNLTIDNFQHCQMCECDSLGTLPGT-ICDPISGQCLCVPNRQGRRC 931
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C CK V+G +C++C Y+ E GC C CN +G+V C GQC+CK
Sbjct: 660 GQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQNSGQCKCKA 719
Query: 239 NVEGAQC 245
NV G +C
Sbjct: 720 NVIGLRC 726
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGD 84
C+ G C +C + Y + DNF C C C+ +G+L C+ G+C C P G
Sbjct: 870 CKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 85 KCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+C++C Y GC C C+ G+V + C+S+ GQC S G+ + +
Sbjct: 930 RCNQCQPGFYISPGNATGCLPCSCHTTGAVNHI--CNSLTGQCVCQDASIAGQRCDQCK- 986
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--D 199
FDP R C+ L G+LN C+ G+C CK VTG KCD C
Sbjct: 987 DHYFGFDPQTGR------CQPCNCHLS--GALNETCHLVTGQCFCKQFVTGSKCDACVPS 1038
Query: 200 VNHYD 204
+H D
Sbjct: 1039 ASHLD 1043
Score = 39.3 bits (90), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKP 79
G C+ G C++C+D+Y+ ++G C CNC+ G+LN C+ G+C CK
Sbjct: 968 GQCVCQDASIAGQRCDQCKDHYFGFDPQTGR--CQPCNCHLSGALNETCHLVTGQCFCKQ 1025
Query: 80 GVTGDKCDRC--DVNHYD 95
VTG KCD C +H D
Sbjct: 1026 FVTGSKCDACVPSASHLD 1043
>sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus GN=Lama1 PE=1 SV=1
Length = 3084
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 103/237 (43%), Gaps = 45/237 (18%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSE-GRCQCK 78
G CL C + DG +CE+C D +Y GD C AC+C+ GSL+ C+ E G C CK
Sbjct: 875 GECLKCLWNTDGAHCERCADGFY---GDAVTAKNCRACDCHENGSLSGVCHLETGLCDCK 931
Query: 79 PGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
P VTG +CD+C +Y GC C C+ GSV + NC +GQC H
Sbjct: 932 PHVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSD--NCTE-EGQC-----------H 977
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN--------SEGRCQCKPG 189
V ++ RC Y GG C + G C C P
Sbjct: 978 CGPGVSGKQ-----------CDRCSHGFYAFQDGGCTPCDCAHTQNNCDPASGECLCPPH 1026
Query: 190 VTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G KC+ C+ ++ E GC++C C+ GS + CD + G C CK G C
Sbjct: 1027 TQGLKCEECEEAYWGLDPEQGCQACNCSAVGS--TSAQCDVLSGHCPCKKGFGGQSC 1081
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 95/237 (40%), Gaps = 48/237 (20%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
DC+ G C++C YY C CNC+ GS++ C EG+C C PGV+G +CD
Sbjct: 929 DCKPHVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSDNCTEEGQCHCGPGVSGKQCD 988
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
RC Y F + GC C+C NCD G+C
Sbjct: 989 RCSHGFYAFQDGGCTPCDC-----AHTQNNCDPASGEC---------------------- 1021
Query: 148 FDPAGNRIWDLRRCKRDTYPL-----------GHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
P + C+ + L GS + QC+ G C CK G G C
Sbjct: 1022 LCPPHTQGLKCEECEEAYWGLDPEQGCQACNCSAVGSTSAQCDVLSGHCPCKKGFGGQSC 1081
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
+C + + F + C C C+ G++ +T + C G C CK+NV G QC
Sbjct: 1082 HQCSLGYRSFPD--CVPCGCDLRGTLPDTCDLEQGLCSCSEDSGTCSCKENVVGPQC 1136
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D + N G GG C++C + G NCE C D YY+
Sbjct: 334 CNCHNKAKDCYYDSSVAKERRSLNTAGQYSGGGVCVNCSQNTTGINCETCIDQYYRPHKV 393
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE------------GRCQCKPGVTGDKCDRCDVNHY 94
D+ C CNC+P+GSL+ C + G+C C+ G GDKCDRC +
Sbjct: 394 SPYDDHPCRPCNCDPVGSLSSVCIKDDRHADLANGKWPGQCPCRKGYAGDKCDRCQFGYR 453
Query: 95 DFGEAGCKSCECNPAGSVKNTP 116
F C C+C GS+ P
Sbjct: 454 GF--PNCIPCDCRTVGSLNEDP 473
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
CNCN S+ C D E G CL C+ G +CE C YY K GD CT
Sbjct: 1410 CNCNNHSDVC--DPE-------TGKCLSCRDHTSGDHCELCASGYYGKVTGLPGD--CTP 1458
Query: 57 CNC--NPIGSLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHYDFGEAG---CKSCEC 106
C C +P S + C EG RC C PG G C+RC ++ A C++C+C
Sbjct: 1459 CTCPHHPPFSFSPTCVVEGDSDFRCNACLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDC 1518
Query: 107 NPAGSVKNTPNCDSVKGQC 125
NP GSV + +CD GQC
Sbjct: 1519 NPQGSVHS--DCDRASGQC 1535
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C G CE+C + Y+ + C ACNC+ +GS + QC+ G C CK G
Sbjct: 1019 GECL-CPPHTQGLKCEECEEAYWGLDPEQGCQACNCSAVGSTSAQCDVLSGHCPCKKGFG 1077
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G C +C + + F + C C C+ G++ +T CD +G C
Sbjct: 1078 GQSCHQCSLGYRSFPD--CVPCGCDLRGTLPDT--CDLEQGLC 1116
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 100/238 (42%), Gaps = 28/238 (11%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC-------NPIGSLNLQCNSEG 73
G C C + G +CE+C +Y + C C C N + +L E
Sbjct: 762 GICSVCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCACPLSIDSNNFSPTCHLTDGEEV 821
Query: 74 RC-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C QC PG +G C+RC +Y C C C+ +CDSV G+C
Sbjct: 822 VCDQCAPGYSGSWCERCADGYYGNPTVPGGTCVPCNCSGNVDPLEAGHCDSVTGECLKCL 881
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKP 188
++ G H E + F + R C D + GSL+ C+ E G C CKP
Sbjct: 882 WNTDG-AHCE---RCADGFYGDAVTAKNCRAC--DCH---ENGSLSGVCHLETGLCDCKP 932
Query: 189 GVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG +CD+C +Y GC C C+ GSV + NC +GQC C V G QC
Sbjct: 933 HVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSD--NCTE-EGQCHCGPGVSGKQC 987
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 29 CQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDK 85
C +G CE+C Y+ ++ C C+CNP GS++ C+ + G+C CKPG TG
Sbjct: 1486 CLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQGSVHSDCDRASGQCVCKPGATGLH 1545
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C++C H E+ C SC+ + G + N + DSV S L+
Sbjct: 1546 CEKCLPRHI-LMESDCVSCDDDCVGPLLN--DLDSVGDAVLSLNLT 1588
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 167 PLGHGGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVK 222
P + ++ +S+ RC C PG G C+RC ++ A C++C+CNP GSV
Sbjct: 1466 PFSFSPTCVVEGDSDFRCNACLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQGSVH 1525
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ +CD GQC CK G C
Sbjct: 1526 S--DCDRASGQCVCKPGATGLHC 1546
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ G GDKCDRC + F C C+C GS+ P + C CK NVE
Sbjct: 432 GQCPCRKGYAGDKCDRCQFGYRGF--PNCIPCDCRTVGSLNEDPCIEP----CLCKKNVE 485
Query: 242 GAQC 245
G C
Sbjct: 486 GKNC 489
Score = 34.3 bits (77), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88
C+ G C++C+ Y G C C+C +GSLN E C CK V G CDR
Sbjct: 436 CRKGYAGDKCDRCQFGY---RGFPNCIPCDCRTVGSLNEDPCIEP-CLCKKNVEGKNCDR 491
Query: 89 CDVNHYDFGE---AGCKSCEC 106
C Y+ E GC C C
Sbjct: 492 CKPGFYNLKERNPEGCSECFC 512
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRCQ-CKPG 80
HC +C G +CE C YY+ G F C C C+ S +C+ G C C
Sbjct: 715 HC-ECPQGYTGTSCEACLPGYYRVDGILFGGICQPCECHGHAS---ECDIHGICSVCTHN 770
Query: 81 VTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN-TPNCDSVKGQ 124
TGD C++C Y G C+ C C + N +P C G+
Sbjct: 771 TTGDHCEQCLPGFYGTPSRGTPGDCQPCACPLSIDSNNFSPTCHLTDGE 819
>sp|Q61292|LAMB2_MOUSE Laminin subunit beta-2 OS=Mus musculus GN=Lamb2 PE=2 SV=2
Length = 1799
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 109/267 (40%), Gaps = 83/267 (31%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG ++ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 350 CECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAV 409
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C C+C+P+GS + +C+S G+C+CK V G +C +C + + G
Sbjct: 410 CRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASDPRG 469
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CN G+V + CDS G C
Sbjct: 470 CQRCQCNSRGTVPGSSPCDSSSGTC----------------------------------F 495
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPA 218
CKR GHG CDRC H+ GC+ C+C+
Sbjct: 496 CKRLV--TGHG-----------------------CDRCLPGHWGLSHDLLGCRPCDCDVG 530
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ P CD GQC C+ ++ G +C
Sbjct: 531 GALD--PQCDEATGQCRCRQHMIGRRC 555
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +C+ G +C+CKPGV G +CD C +Y FG AGC++C+C+P G
Sbjct: 779 NGALPCQCDPQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYGFGPAGCQACQCSPDG 838
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 839 ALSAL--CEGTSGQC 851
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C + +GP+C C+ ++ ++ C C CN +G+ +C S
Sbjct: 1004 HTGQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLLGTDPRRCPSTDLCHCDPST 1063
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CD C N ++F GC+ C C+P S P C+ GQC
Sbjct: 1064 GQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQPCACHP--SRARGPTCNEFTGQCH-CHAG 1120
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D G QC+ S G C C+PGV
Sbjct: 1121 FGGRTCSE--CQELYWGDPG----LQCRACDCDPR-----GIDKPQCHRSTGHCSCRPGV 1169
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1170 SGVRCDQC 1177
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 99/243 (40%), Gaps = 40/243 (16%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ G C+ C YY G C AC C+P G+L+ C + G+C C+PG
Sbjct: 799 HGGQC-RCKPGVVGRRCDVCATGYY-GFGPAGCQACQCSPDGALSALCEGTSGQCPCRPG 856
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR----- 135
G +CD C + F C+ C CN CD+ G C + + G
Sbjct: 857 AFGLRCDHCQRGQWGF--PNCRPCVCN-----GRADECDTHTGACLGCRDYTGGEHCERC 909
Query: 136 ---VHTELRVQSRKNFDP------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
H + R+ P G++ C RD Y + + CQC
Sbjct: 910 IAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHRDGY------------SQQIVCQC 957
Query: 187 KPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEG 242
+ G TG +C+ C H+ D + G C+ CEC+ + CD GQC C N EG
Sbjct: 958 REGYTGLRCEACAPGHFGDPSKPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHNTEG 1017
Query: 243 AQC 245
C
Sbjct: 1018 PHC 1020
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 110/274 (40%), Gaps = 54/274 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 878 CVCNGRADEC---------DTHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPC 928
Query: 58 NCNPIGS-----LNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P G C+ +G CQC+ G TG +C+ C H+ D + G C+ C
Sbjct: 929 PC-PEGPGSQRHFATSCHRDGYSQQIVCQCREGYTGLRCEACAPGHFGDPSKPGGRCQLC 987
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQS--RKNFDPAGNR 154
EC+ + CD GQC ++ G H + QS R + G
Sbjct: 988 ECSGNIDPMDPDACDPHTGQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLLGT- 1046
Query: 155 IWDLRRCKRDTYPLGHGGSLNL-QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
D RRC S +L C+ S G+C C P V G CD C N ++F GC+
Sbjct: 1047 --DPRRCP----------STDLCHCDPSTGQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQ 1094
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S P C+ GQC C G C
Sbjct: 1095 PCACHP--SRARGPTCNEFTGQCHCHAGFGGRTC 1126
Score = 38.1 bits (87), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C G G C C ++ C++C+C+P G K P C G C C+ V
Sbjct: 1113 GQCHCHAGFGGRTCSECQELYWGDPGLQCRACDCDPRGIDK--PQCHRSTGHCSCRPGVS 1170
Query: 242 GAQC 245
G +C
Sbjct: 1171 GVRC 1174
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 208 AGCKSCECNPAGS-------VKNTPNCDSVKGQCECKDNVEGAQCR 246
A C+ C+C+P GS + P V GQC CK++V G +C+
Sbjct: 408 AVCRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQ 453
>sp|P15800|LAMB2_RAT Laminin subunit beta-2 OS=Rattus norvegicus GN=Lamb2 PE=2 SV=1
Length = 1801
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 111/265 (41%), Gaps = 79/265 (29%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG S+ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 350 CECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPAA 409
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C+C+P+GS + +C+S G+C+CK V G +C +C + +
Sbjct: 410 CRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSAS---- 465
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
NP G C+ Q +SRG V P G
Sbjct: 466 ---NPRG--------------CQRCQCNSRGTV-------------PGGT---------- 485
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGS 220
C+S G C CK VTGD CDRC H+ GC+ C+C+ G+
Sbjct: 486 -------------PCDSSSGTCFCKRLVTGDGCDRCLPGHWGLSHDLLGCRPCDCDVGGA 532
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ P CD GQC C+ ++ G +C
Sbjct: 533 LD--PQCDEATGQCPCRPHMIGRRC 555
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +CN G +C+CKPGV G +CD C +Y FG AGC++C+C+P G
Sbjct: 781 NGALPCQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDG 840
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 841 ALSAL--CEGTSGQC 853
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C +GP+C C+ ++ ++ C C CN +G+ +C S
Sbjct: 1006 HTGQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGTDPQRCPSTDLCHCDPST 1065
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CDRC N ++F GC+ C C+P S P C+ GQC
Sbjct: 1066 GQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQPCACHP--SRARGPTCNEFTGQCH-CHAG 1122
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D G QC+ S G C C+PGV
Sbjct: 1123 FGGRTCSE--CQELHWGDPG----LQCRACDCDPR-----GIDKPQCHRSTGHCSCRPGV 1171
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1172 SGVRCDQC 1179
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ +CN G +C+CKPGV G +CD C +Y FG AGC++C+C+P G++ C+
Sbjct: 792 GSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDGALSAL--CEGT 849
Query: 231 KGQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 850 SGQCLCRTGAFGLRC 864
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 97/243 (39%), Gaps = 40/243 (16%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ G C+ C YY G C AC C+P G+L+ C + G+C C+ G
Sbjct: 801 HGGQC-RCKPGVVGRRCDACATGYY-GFGPAGCQACQCSPDGALSALCEGTSGQCLCRTG 858
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR----- 135
G +CD C + F C+ C CN CD+ G C + + G
Sbjct: 859 AFGLRCDHCQRGQWGF--PNCRPCVCN-----GRADECDAHTGACLGCRDYTGGEHCERC 911
Query: 136 ---VHTELRVQSRKNFDP------AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
H + R+ P G++ C RD Y + + C C
Sbjct: 912 IAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHRDGY------------SQQIVCHC 959
Query: 187 KPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEG 242
+ G TG +C+ C H+ D + G C+ CEC+ + CD GQC C + EG
Sbjct: 960 RAGYTGLRCEACAPGHFGDPSKPGGRCQLCECSGNIDPTDPGACDPHTGQCLRCLHHTEG 1019
Query: 243 AQC 245
C
Sbjct: 1020 PHC 1022
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 109/274 (39%), Gaps = 54/274 (19%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 880 CVCNGRADEC---------DAHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPC 930
Query: 58 NCNPIGS-----LNLQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P G C+ +G C C+ G TG +C+ C H+ D + G C+ C
Sbjct: 931 PC-PEGPGSQRHFATSCHRDGYSQQIVCHCRAGYTGLRCEACAPGHFGDPSKPGGRCQLC 989
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGR--------VHTELRVQS--RKNFDPAGNR 154
EC+ + CD GQC + G H + QS R + G
Sbjct: 990 ECSGNIDPTDPGACDPHTGQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGT- 1048
Query: 155 IWDLRRCKRDTYPLGHGGSLNL-QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCK 211
D +RC S +L C+ S G+C C P V G CDRC N ++F GC+
Sbjct: 1049 --DPQRCP----------STDLCHCDPSTGQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQ 1096
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S P C+ GQC C G C
Sbjct: 1097 PCACHP--SRARGPTCNEFTGQCHCHAGFGGRTC 1128
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C G G C C H+ C++C+C+P G K P C G C C+ V
Sbjct: 1115 GQCHCHAGFGGRTCSECQELHWGDPGLQCRACDCDPRGIDK--PQCHRSTGHCSCRPGVS 1172
Query: 242 GAQC 245
G +C
Sbjct: 1173 GVRC 1176
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 208 AGCKSCECNPAGS-------VKNTPNCDSVKGQCECKDNVEGAQCR 246
A C+ C+C+P GS + P V GQC CK++V G +C+
Sbjct: 408 AACRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQ 453
>sp|Q9R1A3|NET3_MOUSE Netrin-3 OS=Mus musculus GN=Ntn3 PE=2 SV=1
Length = 580
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC F ++ C
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG---FQQSRSPVAPCVKTPVP 427
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNF 148
T V+ Q CES +RG L+ RK++
Sbjct: 428 GPTEESSPVEPQDCESHCRPARGSYRISLKKFCRKDY 464
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSG---DNF 53
C CNG ++RC D HG DCQ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDT-------HGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHA 307
Query: 54 CTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA--- 99
C AC+CN N++ S G C C+ G C C Y D G
Sbjct: 308 CLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSD 367
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 368 RRACRACDCHPVGAAGKT--CNQTTGQC 393
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C++C+C+P G+ T C+ GQC CKD V G C
Sbjct: 370 ACRACDCHPVGAAGKT--CNQTTGQCPCKDGVTGLTC 404
>sp|P34710|UNC6_CAEEL Netrin unc-6 OS=Caenorhabditis elegans GN=unc-6 PE=1 SV=1
Length = 612
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKC-----RDNYYQKSGDNF 53
CNCN + RC FD EL+ +G+ GG CL+C+ + G NC C RD +
Sbjct: 347 CNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKA 406
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C +C C+P+GSL CN S G+C CKPGVTG C+RC
Sbjct: 407 CKSCGCHPVGSLGKSCNQSSGQCVCKPGVTGTTCNRC 443
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 63/154 (40%), Gaps = 44/154 (28%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG ++RC FDK G + DC+ + G CE C+ +Y + + N
Sbjct: 291 CKCNGHASRCIFDK-------MGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANS 343
Query: 54 CTACNCNPIGS--------------------LNLQCNSEGR--CQCKPGVTGDKCDRCDV 91
C ACNCN LN + N+ GR CKPG D +
Sbjct: 344 CVACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTS--LPM 401
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
H CKSC C+P GS+ + C+ GQC
Sbjct: 402 TH----RKACKSCGCHPVGSLGKS--CNQSSGQC 429
Score = 38.9 bits (89), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 66/181 (36%), Gaps = 60/181 (33%)
Query: 75 CQCKPGVTGDKCDRCDVNHYD--FGEA------GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C CK G +C+ C HYD +G A C +C CN
Sbjct: 310 CDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCN------------------- 350
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR--C 184
Q + R R EL F +GNR G LN + N+ GR
Sbjct: 351 --QHAKRCRFDAEL-------FRLSGNR--------------SGGVCLNCRHNTAGRNCH 387
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
CKPG D + H CKSC C+P GS+ + C+ GQC CK V G
Sbjct: 388 LCKPGFVRDTS--LPMTH----RKACKSCGCHPVGSLGKS--CNQSSGQCVCKPGVTGTT 439
Query: 245 C 245
C
Sbjct: 440 C 440
>sp|Q924Z9|NET1_RAT Netrin-1 OS=Rattus norvegicus GN=Ntn1 PE=1 SV=1
Length = 604
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 460 TTAASSMEEPEDCDSYCKASKGKLKMNMKKYCRKDY 495
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 75/189 (39%), Gaps = 22/189 (11%)
Query: 27 LDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGD 84
L GD + + E RD+YY D C CN + ++ + C C+ G
Sbjct: 254 LHTFGDENEDDSELARDSYYYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGP 313
Query: 85 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
+CDRC HYD + E N + + + E +LS GR + +
Sbjct: 314 ECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLS--GRKSGGVCLNC 371
Query: 145 RKN-------------FDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPG 189
R N + G I + CK D +P+G G CN + G+C CK G
Sbjct: 372 RHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGK---TCNQTTGQCPCKDG 428
Query: 190 VTGDKCDRC 198
VTG C+RC
Sbjct: 429 VTGITCNRC 437
>sp|O95631|NET1_HUMAN Netrin-1 OS=Homo sapiens GN=NTN1 PE=1 SV=2
Length = 604
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 495
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C +Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 87/227 (38%), Gaps = 30/227 (13%)
Query: 27 LDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGD 84
L GD + + E RD+Y+ D C CN + ++ + C C+ G
Sbjct: 254 LHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGP 313
Query: 85 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
+CDRC HYD + E N + + + E +LS GR + +
Sbjct: 314 ECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLS--GRKSGGVCLNC 371
Query: 145 RKN-------------FDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPG 189
R N + G I + CK D +P+G G CN + G+C CK G
Sbjct: 372 RHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGK---TCNQTTGQCPCKDG 428
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNP-------AGSVKNTPNCDS 229
VTG C+RC Y + C P A SV+ +CDS
Sbjct: 429 VTGITCNRC-AKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDS 474
>sp|O09118|NET1_MOUSE Netrin-1 OS=Mus musculus GN=Ntn1 PE=1 SV=3
Length = 604
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKMNMKKYCRKDY 495
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C Y D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 87/227 (38%), Gaps = 30/227 (13%)
Query: 27 LDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGD 84
L GD + + E RD+YY D C CN + ++ + C C+ G
Sbjct: 254 LHTFGDENEDDSELARDSYYYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGP 313
Query: 85 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
+CDRC HYD + E N + + + E +LS GR + +
Sbjct: 314 ECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLS--GRKSGGVCLNC 371
Query: 145 RKN-------------FDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPG 189
R N + G I + CK D +P+G G CN + G+C CK G
Sbjct: 372 RHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGK---TCNQTTGQCPCKDG 428
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNP-------AGSVKNTPNCDS 229
VTG C+RC Y + C P A SV+ +CDS
Sbjct: 429 VTGITCNRC-AKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDS 474
>sp|O00634|NET3_HUMAN Netrin-3 OS=Homo sapiens GN=NTN3 PE=2 SV=1
Length = 580
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 407
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESH 306
Query: 53 FCTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 366
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQCE 126
C++C+C+P G+ T C+ GQC
Sbjct: 367 DRRACRACDCHPVGAAGKT--CNQTTGQCP 394
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C Y D G A C++C+C+P G+ T C+ GQC CKD
Sbjct: 341 CRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKT--CNQTTGQCPCKDG 398
Query: 240 VEGAQC 245
V G C
Sbjct: 399 VTGLTC 404
>sp|Q2HXW4|NET1_PIG Netrin-1 OS=Sus scrofa GN=NTN1 PE=2 SV=1
Length = 600
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ Y++ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGVTCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 495
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C ++ D G+
Sbjct: 338 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRDLGKPITH 397
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 398 RKACKACDCHPVGAAGKT--CNQTTGQC 423
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 87/227 (38%), Gaps = 30/227 (13%)
Query: 27 LDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGD 84
L GD + + E RD+Y+ D C CN + ++ + C C+ G
Sbjct: 254 LHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGP 313
Query: 85 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
+CDRC HYD + E N + + + E +LS GR + +
Sbjct: 314 ECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLS--GRKSGGVCLNC 371
Query: 145 RKN-------------FDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPG 189
R N F G I + CK D +P+G G CN + G+C CK G
Sbjct: 372 RHNTAGRHCHYCKEGYFRDLGKPITHRKACKACDCHPVGAAGK---TCNQTTGQCPCKDG 428
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNP-------AGSVKNTPNCDS 229
VTG C+RC Y + C P A SV+ +CDS
Sbjct: 429 VTGVTCNRC-AKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDS 474
>sp|Q13751|LAMB3_HUMAN Laminin subunit beta-3 OS=Homo sapiens GN=LAMB3 PE=1 SV=1
Length = 1172
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 44/269 (16%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ +GG C +C+ +G NCE+C+ +Y++ S
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQET 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C +C C+P G++ C+ G+C CK V G++CD C A GC C+CN
Sbjct: 376 CISCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNI 435
Query: 109 AGSVKNTPNCDSVKGQ--CESAQLSSR----GRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
GS ++ P CD G+ C + + H +L S + +P C
Sbjct: 436 LGSRRDMP-CDEESGRCLCLPNVVGPKCDQCAPYHWKL--ASGQGCEP----------CA 482
Query: 163 RDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH-----YDFGEAGCKSCECN 216
D + SL+ QCN G+C C+ G G C + Y GC++C+C+
Sbjct: 483 CDPH-----NSLSPQCNQFTGQCPCREGFGGLMCSAAAIRQCPDRTYGDVATGCRACDCD 537
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ P CD G+C C+ + G +C
Sbjct: 538 FRGT--EGPGCDKASGRCLCRPGLTGPRC 564
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 104/243 (42%), Gaps = 38/243 (15%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCN---------PIGSLNLQCNSE 72
CQ + GPNCE+C Y + + C C+CN P Q
Sbjct: 281 CQHNTAGPNCERCAPFYNNRPWRPAEGQDAHECQRCDCNGHSETCHFDPAVFAASQGAYG 340
Query: 73 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQC 125
G C C+ G C+RC ++++ G C SCEC+P G+V P CD V GQC
Sbjct: 341 GVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCISCECDPDGAVPGAP-CDPVTGQC 399
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GR 183
+ V E + F G + + C R D LG ++ C+ E GR
Sbjct: 400 -----VCKEHVQGERCDLCKPGF--TGLTYANPQGCHRCDCNILG--SRRDMPCDEESGR 450
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C P V G KCD+C H+ GC+ C C+P S+ +P C+ GQC C++ G
Sbjct: 451 CLCLPNVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSL--SPQCNQFTGQCPCREGFGG 508
Query: 243 AQC 245
C
Sbjct: 509 LMC 511
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+ G+ C+ + GRC C+PG+TG +CD+C
Sbjct: 531 CRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQC 567
>sp|Q24568|NETB_DROME Netrin-B OS=Drosophila melanogaster GN=NetB PE=1 SV=1
Length = 793
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
C CNG + RC F+ ELY +G GG C +CQ D G C CR+ YY+ +
Sbjct: 498 CQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKV 557
Query: 54 CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRC 89
C C+C+P+GS CN G+C CK GVTG C+RC
Sbjct: 558 CKRCDCHPVGSTGKTCNHLSGQCPCKEGVTGLTCNRC 594
Score = 34.3 bits (77), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CK C+C+P GS T C+ + GQC CK+ V G C
Sbjct: 558 CKRCDCHPVGSTGKT--CNHLSGQCPCKEGVTGLTC 591
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 65/154 (42%), Gaps = 28/154 (18%)
Query: 64 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD--FGEAG------CKSCECNPAGSVKN- 114
S + C CK G +C+RC ++D +G A CK C+CN G +
Sbjct: 450 STQMSAKLTMTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQCN--GHARRC 507
Query: 115 TPNCDSVK-------GQCESAQLSSRGRV-HTELRVQSRKNFDPAGNRIWDLRRCKR-DT 165
N + K G C + Q + GR H R P +R + CKR D
Sbjct: 508 RFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHR----KVCKRCDC 563
Query: 166 YPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
+P+G G CN G+C CK GVTG C+RC
Sbjct: 564 HPVGSTGK---TCNHLSGQCPCKEGVTGLTCNRC 594
>sp|Q90923|NET3_CHICK Netrin-3 (Fragment) OS=Gallus gallus GN=NTN3 PE=2 SV=1
Length = 581
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ +
Sbjct: 318 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKA 377
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C AC+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 378 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC 414
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG ++RC DKE DC+ + +GP C++C+ +Y + N
Sbjct: 262 CKCNGHASRCVKDKE-------QKLVCDCKHNTEGPECDRCKPFHYDRPWQRASAREANE 314
Query: 54 CTACNCNPIG---SLNLQC------NSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C Y D ++
Sbjct: 315 CLACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKSITD 374
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P G+ T C+ GQC
Sbjct: 375 RKACKACDCHPVGAAGKT--CNQTTGQC 400
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 186 CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
C+ G C C Y D ++ CK+C+C+P G+ T C+ GQC CKD
Sbjct: 348 CRHNTAGRHCHYCKEGFYRDLSKSITDRKACKACDCHPVGAAGKT--CNQTTGQCPCKDG 405
Query: 240 VEGAQC 245
V G C
Sbjct: 406 VTGLTC 411
>sp|P55268|LAMB2_HUMAN Laminin subunit beta-2 OS=Homo sapiens GN=LAMB2 PE=1 SV=2
Length = 1798
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 83/195 (42%), Gaps = 39/195 (20%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSE 72
H G CL C +GP+C C+ ++ ++ C C CN +G+ QC S
Sbjct: 1003 HTGQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTCNLLGTNPQQCPSPDQCHCDPSS 1062
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CDRC N ++ GC+ C C+P S P C+ GQC +
Sbjct: 1063 GQCPCLPNVQGPSCDRCAPNFWNLTSGHGCQPCACHP--SRARGPTCNEFTGQCH-CRAG 1119
Query: 132 SRGRVHTELRVQSRKNFDPA--------GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
GR +E Q DP +R D +C R T G
Sbjct: 1120 FGGRTCSE--CQELHWGDPGLQCHACDCDSRGIDTPQCHRFT----------------GH 1161
Query: 184 CQCKPGVTGDKCDRC 198
C C+PGV+G +CD+C
Sbjct: 1162 CSCRPGVSGVRCDQC 1176
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 55/236 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+G ++ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 347 CECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPAV 406
Query: 54 CTACNCNPIGSLN-LQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFG---EAG 100
C +C+C+P+GS + +C+S G+C+CK V G +C +C + G
Sbjct: 407 CRSCDCDPMGSQDGGRCDSHDDPALGLVSGQCRCKEHVVGTRCQQCRDGFFGLSISDRLG 466
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+CN G+V + CD G C +L + GR R
Sbjct: 467 CRRCQCNARGTVPGSTPCDPNSGSCYCKRLVT-GR---------------------GCDR 504
Query: 161 CKRDTYPLGH------------GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
C + L H GG+L+ QC+ G+C C+ + G +C++ ++
Sbjct: 505 CLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEGTGQCHCRQHMVGRRCEQVQPGYF 560
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C CNP GSL+ +CN G +C CKPGV G +CD C +Y FG GC++C+C+ G
Sbjct: 778 NGALPCQCNPQGSLSSECNPHGGQCLCKPGVVGRRCDLCAPGYYGFGPTGCQACQCSHEG 837
Query: 111 SVKNTPNCDSVKGQC 125
++ + C+ GQC
Sbjct: 838 ALSSL--CEKTSGQC 850
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 168 LGHGGSLNLQCNSE-----------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
L + G+L QCN + G+C CKPGV G +CD C +Y FG GC++C+C+
Sbjct: 775 LIYNGALPCQCNPQGSLSSECNPHGGQCLCKPGVVGRRCDLCAPGYYGFGPTGCQACQCS 834
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ + C+ GQC C+ G +C
Sbjct: 835 HEGALSSL--CEKTSGQCLCRTGAFGLRC 861
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 103/236 (43%), Gaps = 26/236 (11%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG CL C+ G C+ C YY G C AC C+ G+L+ C + G+C C+ G
Sbjct: 798 HGGQCL-CKPGVVGRRCDLCAPGYY-GFGPTGCQACQCSHEGALSSLCEKTSGQCLCRTG 855
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CDRC + F C+ C CN + C++ G C + + G H E
Sbjct: 856 AFGLRCDRCQRGQWGF--PSCRPCVCN-----GHADECNTHTGACLGCRDHTGGE-HCE- 906
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL-------QCNSEGRCQCKPGVTGD 193
R + + DP R+ +C+ P G G + + + + C C+ G TG
Sbjct: 907 RCIAGFHGDP---RLPYGGQCRPCPCPEGPGSQRHFATSCHQDEYSQQIVCHCRAGYTGL 963
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+C+ C H+ D G C+ CEC+ + CD GQC C + EG C
Sbjct: 964 RCEACAPGHFGDPSRPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHC 1019
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 107/279 (38%), Gaps = 64/279 (22%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------------- 46
C CNG ++ C H G CL C+ G +CE+C ++
Sbjct: 877 CVCNGHADEC---------NTHTGACLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPC 927
Query: 47 -----QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG 100
S +F T+C+ + + + + C C+ G TG +C+ C H+ D G
Sbjct: 928 PCPEGPGSQRHFATSCHQD-------EYSQQIVCHCRAGYTGLRCEACAPGHFGDPSRPG 980
Query: 101 --CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR--VQSRKNFDPAGNRIW 156
C+ CEC+ + CD GQC R HTE + F R
Sbjct: 981 GRCQLCECSGNIDPMDPDACDPHTGQC------LRCLHHTEGPHCAHCKPGFHGQAAR-- 1032
Query: 157 DLRRCKRDTYPLGHGGSLNLQC---------NSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
+ C R T L G+ QC S G+C C P V G CDRC N ++
Sbjct: 1033 --QSCHRCTCNL--LGTNPQQCPSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPNFWNLTS 1088
Query: 208 A-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+P S P C+ GQC C+ G C
Sbjct: 1089 GHGCQPCACHP--SRARGPTCNEFTGQCHCRAGFGGRTC 1125
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C+CK V G +C +C + GC+ C+CN G+V + CD G C CK
Sbjct: 436 GQCRCKEHVVGTRCQQCRDGFFGLSISDRLGCRRCQCNARGTVPGSTPCDPNSGSCYCKR 495
Query: 239 NVEGAQC 245
V G C
Sbjct: 496 LVTGRGC 502
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G+C C+ G G C C H+ C +C+C+ G +TP C G C C+ V
Sbjct: 1112 GQCHCRAGFGGRTCSECQELHWGDPGLQCHACDCDSRG--IDTPQCHRFTGHCSCRPGVS 1169
Query: 242 GAQC 245
G +C
Sbjct: 1170 GVRC 1173
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 208 AGCKSCECNPAGS-------VKNTPNCDSVKGQCECKDNVEGAQCR 246
A C+SC+C+P GS + P V GQC CK++V G +C+
Sbjct: 405 AVCRSCDCDPMGSQDGGRCDSHDDPALGLVSGQCRCKEHVVGTRCQ 450
>sp|P11046|LAMB1_DROME Laminin subunit beta-1 OS=Drosophila melanogaster GN=LanB1 PE=1
SV=4
Length = 1788
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 33 RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDV 91
+ P C+ DN + + CNCNP GSL+ C S G CQCKP V G +CD+C
Sbjct: 766 KSDPKCQNL-DNILSVFVHDGASMCNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAP 824
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
Y FG GCK+C+CN GS CD + GQC+
Sbjct: 825 GTYGFGPEGCKACDCNSIGSKDKY--CDLITGQCQ 857
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 89/227 (39%), Gaps = 69/227 (30%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---SEGRCQCKPG 80
G CL C G +CE C+D ++ + C C C+ +G+ N + G+C C P
Sbjct: 1010 GACLKCLYQTTGDHCELCKDGFFGDALQQNCQQCECDFLGTNNTIAHCDRFTGQCPCLPN 1069
Query: 81 VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G +CD+C NH+ GC+SC NCD +
Sbjct: 1070 VQGVRCDQCAENHWKIASGEGCESC------------NCDPI------------------ 1099
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
G+L+ QCNS G+CQCKPG G C++C
Sbjct: 1100 --------------------------------GALHEQCNSYTGQCQCKPGFGGRACNQC 1127
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+++ C+ CEC+ G+ CD G C C + + G +C
Sbjct: 1128 QAHYWGNPNEKCQPCECDQFGAADF--QCDRETGNCVCHEGIGGYKC 1172
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 56/236 (23%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CN + C FD+ ++ +G GG C +C + G +CE+C +Y+ + +
Sbjct: 355 CECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERV 414
Query: 54 CTACNCNPIGS--------LNL--QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C C+C+P GS LN + G C CK VTG +C++C +++ G
Sbjct: 415 CQPCDCDPQGSSDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEG 474
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C CNP G++ N+ C G+C+ + + G+ D +
Sbjct: 475 CEPCTCNPLGTLNNS-GCVMRTGECKCKKYVT-GK---------------------DCNQ 511
Query: 161 CKRDTYPLGH------------GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
C +TY L GGS + C+ G+C+C+P +TG C + N++
Sbjct: 512 CMPETYGLSESPEGCSLCNCDAGGSYDNYCDVISGQCRCRPHMTGRSCSQPKQNYF 567
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G C +C+ +Y+ + C C C+ G+ + QC+ E G C C G+ G KC+ C
Sbjct: 1121 GRACNQCQAHYWGNPNEK-CQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNEC 1175
>sp|Q61087|LAMB3_MOUSE Laminin subunit beta-3 OS=Mus musculus GN=Lamb3 PE=2 SV=2
Length = 1168
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 116/274 (42%), Gaps = 54/274 (19%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C+CNG S C FD ++ ++ +GG C +C+ +G NCE+C+ +Y++
Sbjct: 313 CDCNGHSETCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNRRPSAPIHET 372
Query: 54 CTACNCNPIGSLN-LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ G+C CK V G++CD C A GC +C+C+
Sbjct: 373 CIPCECDPDGAVQGAPCDRLTGQCVCKEYVQGERCDLCKPGFTGLTFANPKGCHACDCSI 432
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G+ K+ P C+ G+C P + +C + L
Sbjct: 433 LGARKDMP-CEEETGRCLCLP----------------NVVGPKCD------QCAPSHWKL 469
Query: 169 GHG-----------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH-----YDFGEAGCK 211
G SL+ QCN G+C C+ G G C + Y GC+
Sbjct: 470 ASGLGCEPCACDPRNSLSSQCNQFTGQCPCREGFGGLTCSSAAIRQCPDQTYGHVATGCR 529
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C+C+ G+ P CD G+C C+ G +C
Sbjct: 530 ACDCDFRGT--EGPGCDKASGRCLCRPGFTGPRC 561
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 46/202 (22%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSL-NLQCNSE-GRCQ 76
G C+ C+ G C+ C+ + +G F C AC+C+ +G+ ++ C E GRC
Sbjct: 394 GQCV-CKEYVQGERCDLCKPGF---TGLTFANPKGCHACDCSILGARKDMPCEEETGRCL 449
Query: 77 CKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V G KCD+C +H+ GC+ C C+P S+ + C+ GQC
Sbjct: 450 CLPNVVGPKCDQCAPSHWKLASGLGCEPCACDPRNSLSS--QCNQFTGQCPC-------- 499
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------------SEG 182
R+ F +R+C TY GH + C+ + G
Sbjct: 500 ---------REGFGGLTCSSAAIRQCPDQTY--GHVATGCRACDCDFRGTEGPGCDKASG 548
Query: 183 RCQCKPGVTGDKCDRCDVNHYD 204
RC C+PG TG +CD+C H D
Sbjct: 549 RCLCRPGFTGPRCDQCQRGHCD 570
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 112/273 (41%), Gaps = 38/273 (13%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-------DNF 53
C C+G ++RC + + CQ + GPNC++C Y + +
Sbjct: 250 CFCHGHADRCAPNPGGSTTAVQVNNVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQDTHE 309
Query: 54 CTACNCN---------PIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG--- 100
C C+CN P Q + G C C+ G C+RC ++++
Sbjct: 310 CQRCDCNGHSETCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNRRPSAPI 369
Query: 101 ---CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
C CEC+P G+V+ P CD + GQC + R + F G +
Sbjct: 370 HETCIPCECDPDGAVQGAP-CDRLTGQCVCKEYVQGERCDL-----CKPGF--TGLTFAN 421
Query: 158 LRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCE 214
+ C D L G ++ C E GRC C P V G KCD+C +H+ GC+ C
Sbjct: 422 PKGCHACDCSIL--GARKDMPCEEETGRCLCLPNVVGPKCDQCAPSHWKLASGLGCEPCA 479
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C+P S+ + C+ GQC C++ G C S
Sbjct: 480 CDPRNSLSS--QCNQFTGQCPCREGFGGLTCSS 510
>sp|Q8WTR8|NET5_HUMAN Netrin-5 OS=Homo sapiens GN=NTN5 PE=2 SV=2
Length = 489
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN + RC F+ EL+ +G GG C C+ G +C C+ +++
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRA 271
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG-- 110
C AC C+PIG+ CN + G+C CK GVTG C+RC Y + C+ P
Sbjct: 272 CRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPG-YQQSRSPRMPCQRIPEATT 330
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
++ TP S QC++ S RVH LR
Sbjct: 331 TLATTPGAYSSDPQCQNYCNMSDTRVHMSLR 361
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D + F C++C+C+P G+ T C+ GQC CK V G C
Sbjct: 261 DPSQPIFSRRACRACQCHPIGATGGT--CNQTSGQCTCKLGVTGLTC 305
>sp|Q90922|NET1_CHICK Netrin-1 OS=Gallus gallus GN=NTN1 PE=1 SV=1
Length = 606
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ S
Sbjct: 343 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKA 402
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C C+C+P+G+ CN + G+C CK GVTG C+RC
Sbjct: 403 CKECDCHPVGAAGQTCNQTTGQCPCKDGVTGITCNRC 439
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 32/148 (21%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG ++RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 287 CKCNGHASRCVRDRD-------DNLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANE 339
Query: 54 CTACNCNPIG---SLNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA--- 99
C ACNCN N++ S G C C+ G C C Y D +
Sbjct: 340 CVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISH 399
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK C+C+P G+ T C+ GQC
Sbjct: 400 RKACKECDCHPVGAAGQT--CNQTTGQC 425
Score = 38.1 bits (87), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 86/225 (38%), Gaps = 50/225 (22%)
Query: 27 LDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGD 84
L GD + + E RD+Y+ D C CN S ++ + C CK G
Sbjct: 256 LHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVRDRDDNLVCDCKHNTAGP 315
Query: 85 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQ 143
+CDRC HYD + E N + NC+ +C R + EL ++
Sbjct: 316 ECDRCKPFHYDRPWQRATAREANECVAC----NCNLHARRC---------RFNMELYKLS 362
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGS-LNLQCNSEGR--CQCKPGVTGDKCDRCDV 200
RK+ GG LN + N+ GR CK G D +
Sbjct: 363 GRKS-----------------------GGVCLNCRHNTAGRHCHYCKEGFYRDLSK--PI 397
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+H CK C+C+P G+ T C+ GQC CKD V G C
Sbjct: 398 SH----RKACKECDCHPVGAAGQT--CNQTTGQCPCKDGVTGITC 436
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.479
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,945,438
Number of Sequences: 539616
Number of extensions: 4758805
Number of successful extensions: 14696
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 397
Number of HSP's that attempted gapping in prelim test: 8951
Number of HSP's gapped (non-prelim): 2770
length of query: 247
length of database: 191,569,459
effective HSP length: 114
effective length of query: 133
effective length of database: 130,053,235
effective search space: 17297080255
effective search space used: 17297080255
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)