Query psy15472
Match_columns 247
No_of_seqs 193 out of 1227
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 21:56:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15472.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15472hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1klo_A Laminin; glycoprotein; 99.9 8.8E-27 3E-31 184.3 6.2 131 22-211 16-161 (162)
2 4aqs_A Laminin subunit beta-1; 99.9 5.6E-26 1.9E-30 210.7 7.4 186 1-247 318-525 (525)
3 1klo_A Laminin; glycoprotein; 99.9 4.8E-24 1.7E-28 168.6 6.9 132 57-247 1-146 (162)
4 4aqs_A Laminin subunit beta-1; 99.8 5.4E-21 1.8E-25 177.3 13.3 193 1-247 254-475 (525)
5 2gy5_A Angiopoietin-1 receptor 99.6 2.2E-16 7.5E-21 142.3 7.4 129 40-247 188-320 (423)
6 2y38_A Laminin subunit alpha-5 99.6 2.2E-16 7.6E-21 140.2 5.9 93 1-97 266-382 (403)
7 4aqt_A Laminin subunit gamma-1 99.5 2.6E-15 8.9E-20 132.7 3.9 99 1-106 255-369 (375)
8 2gy5_A Angiopoietin-1 receptor 99.5 1.8E-14 6E-19 129.9 3.5 94 23-130 215-312 (423)
9 3zyj_B Netrin-G1; cell adhesio 99.4 6.7E-14 2.3E-18 124.8 2.6 106 1-130 297-419 (426)
10 4aqt_A Laminin subunit gamma-1 99.4 1.3E-13 4.6E-18 121.7 2.0 115 44-214 242-368 (375)
11 2y38_A Laminin subunit alpha-5 99.2 6.7E-12 2.3E-16 111.5 3.1 114 42-206 251-382 (403)
12 3zyj_B Netrin-G1; cell adhesio 99.1 4.7E-12 1.6E-16 112.9 -0.0 74 44-125 284-373 (426)
13 2vj2_A Jagged-1; signalling, p 99.1 3.7E-11 1.2E-15 95.1 3.7 147 23-247 16-169 (169)
14 3k6s_B Integrin beta-2; cell r 99.1 5E-11 1.7E-15 112.7 5.1 58 23-87 445-513 (687)
15 2ygq_A WIF-1, WNT inhibitory f 99.1 1.5E-10 5.1E-15 100.8 7.7 22 225-247 287-308 (324)
16 3fcs_B Integrin beta-3; beta p 99.0 8.7E-10 3E-14 104.4 8.2 133 23-199 457-602 (690)
17 3fcs_B Integrin beta-3; beta p 98.8 4.8E-09 1.6E-13 99.4 7.0 126 72-246 457-599 (690)
18 2ygq_A WIF-1, WNT inhibitory f 98.8 5.1E-09 1.8E-13 91.1 4.9 21 68-88 192-212 (324)
19 2vj2_A Jagged-1; signalling, p 98.7 4.6E-09 1.6E-13 82.9 2.2 112 72-246 16-128 (169)
20 2vj3_A Neurogenic locus notch 98.6 2.2E-08 7.4E-13 76.0 4.4 50 183-246 67-118 (135)
21 4d90_A EGF-like repeat and dis 98.6 6.2E-08 2.1E-12 74.0 5.6 50 183-246 81-132 (143)
22 3k6s_B Integrin beta-2; cell r 98.5 2.9E-08 9.9E-13 93.9 1.1 151 57-247 425-592 (687)
23 4d90_A EGF-like repeat and dis 98.3 9.9E-07 3.4E-11 67.2 6.5 64 23-87 22-94 (143)
24 2vj3_A Neurogenic locus notch 98.2 9.3E-07 3.2E-11 66.9 4.6 51 23-87 27-80 (135)
25 2p28_B Integrin beta-2; hybrid 98.1 9.2E-07 3.2E-11 72.4 2.1 50 182-246 154-213 (217)
26 3tbd_A Netrin-G2, laminet-2; l 97.8 4.9E-06 1.7E-10 72.0 1.3 41 1-49 270-310 (338)
27 4fbr_A Lectin, myxobacterial h 97.8 2.5E-08 8.6E-13 83.7 -13.3 61 23-88 52-135 (267)
28 2p28_B Integrin beta-2; hybrid 97.6 7.2E-06 2.4E-10 67.1 -0.6 58 23-87 106-174 (217)
29 1z1y_A Ookinete surface protei 97.6 5E-07 1.7E-11 72.1 -7.6 50 183-246 117-174 (186)
30 2bou_A EGF-like module contain 97.4 7.9E-05 2.7E-09 56.6 3.2 58 183-246 69-133 (143)
31 1tpg_A T-plasminogen activator 97.3 0.00011 3.9E-09 51.4 2.7 51 181-246 31-85 (91)
32 1tpg_A T-plasminogen activator 97.3 0.00026 8.9E-09 49.6 4.2 37 52-88 49-86 (91)
33 4fbr_A Lectin, myxobacterial h 97.1 2.4E-06 8.2E-11 71.7 -9.2 17 72-88 52-68 (267)
34 1yo8_A Thrombospondin-2; EGF, 96.9 0.00037 1.3E-08 65.4 3.1 52 183-246 71-145 (634)
35 2wg3_C Hedgehog-interacting pr 96.9 0.00012 4.1E-09 66.5 -0.7 20 68-87 403-422 (463)
36 2wg3_C Hedgehog-interacting pr 96.7 0.00032 1.1E-08 63.7 0.7 54 176-247 402-455 (463)
37 3u7u_G Neuregulin 1; signaling 96.3 0.0016 5.6E-08 41.0 1.8 35 207-247 8-49 (55)
38 1z1y_A Ookinete surface protei 96.0 0.0001 3.4E-09 58.5 -6.2 46 183-242 75-126 (186)
39 2bou_A EGF-like module contain 95.7 0.0035 1.2E-07 47.3 1.7 17 72-88 67-83 (143)
40 1edm_B Factor IX; epidermal gr 95.6 0.0065 2.2E-07 35.0 2.1 33 209-247 5-39 (39)
41 1edm_B Factor IX; epidermal gr 95.5 0.0098 3.3E-07 34.3 2.7 35 52-87 4-38 (39)
42 2c4f_L Coagulation factor VII 95.4 0.0035 1.2E-07 47.4 0.8 35 50-88 46-83 (142)
43 3u7u_G Neuregulin 1; signaling 95.2 0.01 3.6E-07 37.3 2.3 38 51-88 8-49 (55)
44 1x7a_L Coagulation factor IX, 95.2 0.012 4E-07 44.7 3.1 38 50-88 47-84 (146)
45 1a3p_A Epidermal growth factor 94.7 0.02 6.9E-07 34.1 2.6 17 72-88 25-41 (45)
46 1yo8_A Thrombospondin-2; EGF, 94.7 0.0072 2.5E-07 56.7 0.8 16 72-87 69-85 (634)
47 1a3p_A Epidermal growth factor 94.6 0.017 5.7E-07 34.5 2.1 15 232-246 26-40 (45)
48 3ca7_A Protein spitz; argos, E 94.6 0.0029 1E-07 39.3 -1.4 14 233-246 34-47 (52)
49 1egf_A Epidermal growth factor 94.6 0.044 1.5E-06 33.9 4.0 23 72-94 28-50 (53)
50 2c4f_L Coagulation factor VII 94.5 0.0058 2E-07 46.2 -0.4 53 183-246 69-128 (142)
51 1egf_A Epidermal growth factor 94.3 0.029 1E-06 34.7 2.8 16 232-247 29-44 (53)
52 1dx5_I Thrombomodulin; serine 93.9 0.0061 2.1E-07 44.5 -1.2 44 183-243 62-111 (118)
53 1nfu_B Coagulation factor XA, 93.7 0.0078 2.7E-07 48.1 -1.1 41 44-88 34-78 (195)
54 1x7a_L Coagulation factor IX, 93.3 0.03 1E-06 42.4 1.8 46 183-246 70-125 (146)
55 1aut_L Activated protein C; se 93.3 0.036 1.2E-06 40.0 2.0 17 72-88 34-50 (114)
56 1k36_A Epiregulin; EGF-like fo 93.0 0.028 9.4E-07 33.8 0.9 17 72-88 27-43 (46)
57 2vh0_B Activated factor XA lig 92.1 0.025 8.5E-07 42.2 -0.2 35 50-88 41-78 (134)
58 1hae_A Heregulin-alpha; growth 91.5 0.051 1.8E-06 34.8 0.8 32 209-246 8-46 (63)
59 3tbd_A Netrin-G2, laminet-2; l 91.2 0.056 1.9E-06 46.6 1.0 50 45-97 258-310 (338)
60 3fl7_A Ephrin receptor; ATP-bi 91.2 0.064 2.2E-06 49.4 1.4 54 181-241 262-319 (536)
61 1hae_A Heregulin-alpha; growth 91.1 0.049 1.7E-06 34.9 0.4 17 72-88 31-47 (63)
62 1emn_A Fibrillin; extracellula 91.0 0.077 2.6E-06 35.8 1.4 46 183-244 27-77 (82)
63 2ygo_A WIF-1, WNT inhibitory f 90.7 0.12 4.1E-06 40.7 2.4 23 66-88 158-180 (188)
64 1k36_A Epiregulin; EGF-like fo 90.1 0.13 4.5E-06 30.8 1.6 16 232-247 28-43 (46)
65 3h5c_B Vitamin K-dependent pro 89.7 0.46 1.6E-05 40.2 5.5 32 52-87 6-40 (317)
66 1nfu_B Coagulation factor XA, 89.6 0.044 1.5E-06 43.7 -1.0 49 183-246 64-120 (195)
67 1nql_B Epidermal growth factor 89.5 0.094 3.2E-06 32.4 0.7 15 232-246 29-43 (53)
68 2k2s_B Micronemal protein 6; m 89.2 0.051 1.8E-06 34.8 -0.7 36 207-246 11-49 (61)
69 2hey_R Tumor necrosis factor r 89.2 0.065 2.2E-06 40.5 -0.3 79 26-104 19-120 (146)
70 2ygo_A WIF-1, WNT inhibitory f 89.0 0.19 6.7E-06 39.5 2.4 22 225-247 159-180 (188)
71 3h5c_B Vitamin K-dependent pro 88.0 0.68 2.3E-05 39.1 5.3 14 183-196 27-40 (317)
72 2uwi_A CRME protein; receptor, 87.6 0.12 4E-06 39.0 0.2 58 25-82 16-88 (142)
73 2p26_A Integrin beta-2; hybrid 87.5 0.17 5.7E-06 42.6 1.2 15 182-196 207-221 (280)
74 1uzk_A Fibrillin-1; glycoprote 86.7 0.1 3.5E-06 39.9 -0.6 16 72-87 23-42 (162)
75 2k2s_B Micronemal protein 6; m 86.3 0.063 2.2E-06 34.3 -1.6 37 51-88 11-50 (61)
76 1nql_B Epidermal growth factor 86.1 0.23 8E-06 30.6 1.0 23 72-94 28-50 (53)
77 2w86_A Fibrillin-1, fibrillin1 85.3 0.12 4.1E-06 38.8 -0.8 19 226-244 121-141 (147)
78 2vh0_B Activated factor XA lig 84.7 0.09 3.1E-06 39.0 -1.7 16 72-87 101-120 (134)
79 3ca7_A Protein spitz; argos, E 83.9 0.42 1.4E-05 29.2 1.4 17 72-88 32-48 (52)
80 1lmj_A Fibrillin 1; EGF, calci 83.5 0.18 6.3E-06 34.2 -0.4 46 183-244 26-80 (86)
81 1emn_A Fibrillin; extracellula 83.2 0.53 1.8E-05 31.5 1.8 14 72-85 64-77 (82)
82 3fl7_A Ephrin receptor; ATP-bi 83.1 0.32 1.1E-05 44.7 0.9 54 72-132 262-319 (536)
83 3e50_C Protransforming growth 82.6 0.54 1.9E-05 28.6 1.5 16 232-247 30-45 (50)
84 2rnl_A Amphiregulin; AR, color 82.3 0.67 2.3E-05 28.2 1.9 15 233-247 35-49 (50)
85 1z6c_A Vitamin K-dependent pro 82.2 0.44 1.5E-05 32.3 1.1 46 183-246 26-77 (87)
86 3ltf_D Protein spitz; receptor 81.0 0.5 1.7E-05 29.7 1.0 17 72-88 32-48 (58)
87 1iox_A Betacellulin; EGF-like 80.8 0.53 1.8E-05 28.6 1.0 15 233-247 31-45 (50)
88 1jma_B Herpesvirus entry media 80.7 0.58 2E-05 36.0 1.5 59 24-82 14-88 (167)
89 3ltf_D Protein spitz; receptor 80.7 0.47 1.6E-05 29.8 0.8 15 233-247 34-48 (58)
90 1sg1_X Tumor necrosis factor r 80.5 0.45 1.5E-05 36.3 0.8 48 35-82 33-86 (161)
91 3e50_C Protransforming growth 80.4 0.79 2.7E-05 27.9 1.7 17 72-88 29-45 (50)
92 1uzk_A Fibrillin-1; glycoprote 80.2 0.16 5.3E-06 38.8 -2.0 58 23-86 74-157 (162)
93 1iox_A Betacellulin; EGF-like 79.7 0.67 2.3E-05 28.2 1.2 17 72-88 29-45 (50)
94 2rnl_A Amphiregulin; AR, color 79.6 0.98 3.4E-05 27.4 1.9 17 72-88 33-49 (50)
95 1z6c_A Vitamin K-dependent pro 78.8 1.1 3.7E-05 30.3 2.2 15 72-87 63-77 (87)
96 3u3p_A Tumor necrosis factor r 78.3 0.59 2E-05 39.8 0.9 72 23-94 23-114 (313)
97 1aut_L Activated protein C; se 78.1 0.86 2.9E-05 32.5 1.6 13 233-245 36-48 (114)
98 3urf_Z Tumor necrosis factor r 76.7 0.76 2.6E-05 35.6 1.0 60 23-82 17-91 (171)
99 2e26_A Reelin, reeler protein; 76.0 0.29 9.8E-06 46.3 -1.9 44 185-246 521-564 (725)
100 2w2n_E LDL receptor, low-densi 73.4 0.62 2.1E-05 33.0 -0.2 44 183-243 51-100 (107)
101 3urf_Z Tumor necrosis factor r 71.9 1 3.5E-05 34.9 0.6 48 192-241 38-91 (171)
102 4fhq_A Tumor necrosis factor r 70.0 0.92 3.1E-05 33.7 -0.0 57 26-82 18-90 (134)
103 2fd6_A Urokinase-type plasmino 68.8 2.4 8.3E-05 30.7 2.1 16 73-88 19-34 (122)
104 3tje_F Tumor necrosis factor r 68.7 1.3 4.5E-05 33.7 0.6 10 37-46 43-52 (156)
105 3k51_B Decoy receptor 3; DCR3, 67.5 1.2 4.2E-05 34.6 0.2 60 23-82 19-93 (176)
106 3k51_B Decoy receptor 3; DCR3, 65.8 1.3 4.6E-05 34.3 0.2 47 193-241 41-93 (176)
107 1xdt_R Hbegf, heparin-binding 64.3 2 6.9E-05 28.7 0.8 15 233-247 63-77 (79)
108 3nt1_A Prostaglandin-endoperox 64.1 2.4 8.2E-05 39.3 1.5 37 52-88 2-39 (587)
109 3p5b_L Low density lipoprotein 63.5 4.2 0.00014 35.4 2.9 44 183-243 22-71 (400)
110 1xdt_R Hbegf, heparin-binding 62.3 2.5 8.5E-05 28.3 0.9 17 72-88 61-77 (79)
111 3v65_B Low-density lipoprotein 61.6 2 6.7E-05 37.3 0.4 47 183-246 25-82 (386)
112 2i9a_A Urokinase-type plasmino 60.7 4.4 0.00015 30.3 2.2 33 56-88 12-46 (145)
113 3me4_A Tumor necrosis factor r 60.7 2.1 7.3E-05 34.4 0.5 48 192-240 64-117 (216)
114 3u3p_A Tumor necrosis factor r 58.3 3.1 0.00011 35.3 1.1 48 192-241 44-97 (313)
115 1ext_A Tumor necrosis factor r 58.3 3.2 0.00011 31.6 1.0 47 36-82 40-93 (162)
116 1q4g_A Prostaglandin G/H synth 58.2 3.3 0.00011 38.1 1.3 37 52-88 3-40 (553)
117 3qd6_R CD40L receptor, tumor n 57.3 5.2 0.00018 30.9 2.2 57 26-82 18-90 (177)
118 1du3_A Death receptor 5; trail 57.3 4.2 0.00014 29.7 1.6 24 24-47 23-51 (130)
119 2e26_A Reelin, reeler protein; 57.1 1.3 4.5E-05 41.9 -1.5 26 58-88 540-565 (725)
120 1g1s_A P-selectin; selectin, l 56.1 2.1 7.3E-05 32.1 -0.3 14 233-246 141-154 (162)
121 3p5b_L Low density lipoprotein 52.5 7.2 0.00025 33.9 2.5 13 72-84 59-71 (400)
122 1g1s_A P-selectin; selectin, l 52.0 4.8 0.00016 30.0 1.2 17 72-88 139-155 (162)
123 3alq_R Tumor necrosis factor r 51.3 4.1 0.00014 31.3 0.7 34 25-58 21-65 (173)
124 3v65_B Low-density lipoprotein 47.3 4.6 0.00016 34.9 0.4 16 72-87 63-82 (386)
125 3t3p_B Integrin beta-3; integr 42.5 8.7 0.0003 34.5 1.4 33 213-246 435-472 (472)
126 2p26_A Integrin beta-2; hybrid 42.3 7.5 0.00026 32.5 0.9 16 231-246 206-221 (280)
127 3cfw_A L-selectin; EGF, cell a 42.0 8.7 0.0003 28.6 1.2 17 72-88 139-155 (164)
128 1n7d_A LDL receptor, low-densi 40.8 44 0.0015 31.3 6.1 44 34-84 313-365 (699)
129 1n7d_A LDL receptor, low-densi 40.8 41 0.0014 31.5 5.9 16 227-242 347-364 (699)
130 1mox_A Epidermal growth factor 36.3 17 0.00057 33.0 2.3 7 198-204 287-293 (501)
131 3t3p_B Integrin beta-3; integr 28.6 16 0.00055 32.8 0.8 34 53-87 432-472 (472)
132 3v4v_B Integrin beta-7; cell a 28.1 12 0.00042 33.8 0.0 32 213-246 457-493 (503)
133 1g1t_A E-selectin; EGF, adhesi 27.6 20 0.00067 26.3 1.1 17 72-88 139-155 (157)
134 3v4v_B Integrin beta-7; cell a 25.1 15 0.00052 33.2 0.0 15 182-196 479-493 (503)
135 3m0c_C LDL receptor, low-densi 20.4 44 0.0015 32.0 2.2 44 183-243 334-383 (791)
No 1
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.93 E-value=8.8e-27 Score=184.35 Aligned_cols=131 Identities=35% Similarity=0.867 Sum_probs=108.3
Q ss_pred CCeeccCCCCCCCCCCCCCCCCCCccCCCC-----CCCcCCCCCCCCCCC--cCCCC-Cceee-CCCCCcCCCCCCCCCC
Q psy15472 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NFCTACNCNPIGSLN--LQCNS-EGRCQ-CKPGVTGDKCDRCDVN 92 (247)
Q Consensus 22 ~~g~C~~C~~~~~G~~Ce~C~~Gy~g~~~~-----~~C~~C~C~~~g~~~--~~c~~-~g~C~-C~~g~~G~~C~~C~~G 92 (247)
..++|++|++||+|++||+|++||||.+.. ..|++|+|+++++.+ ..|+. +|+|+ |+++|+|++|++|++|
T Consensus 16 g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce~C~~G 95 (162)
T 1klo_A 16 KEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEG 95 (162)
T ss_dssp CCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBCTTEETTTTCEECTT
T ss_pred CCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCCCCCcCCCcCcCchh
Confidence 368997799999999999999999997643 579999999876432 46776 89996 9999999999999999
Q ss_pred cccCCC-----CCcccccCCCCCCCCCCCCCcCCCCceeccCCCCCCccceeeeeccccCcCCCCCccccCCCCCCCCCC
Q psy15472 93 HYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167 (247)
Q Consensus 93 ~~g~~~-----~~C~~C~C~~~g~~~~~~~C~~~tG~C~c~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 167 (247)
|||.+. ..|++|+|++.++......|++++|
T Consensus 96 y~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG-------------------------------------------- 131 (162)
T 1klo_A 96 FFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTG-------------------------------------------- 131 (162)
T ss_dssp EEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTC--------------------------------------------
T ss_pred hcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCC--------------------------------------------
Confidence 999762 3689999998876543234666655
Q ss_pred CCCCCCCCccCCCCccccCCCCcccCCCCCCCCCcccCC-CCCCc
Q psy15472 168 LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCK 211 (247)
Q Consensus 168 ~~~~~~~~~~C~~~G~C~C~~g~~G~~C~~C~~g~~g~~-~~~C~ 211 (247)
+|+|+++|+|++||+|++|||++. ..+|+
T Consensus 132 ---------------~C~C~~g~~G~~Cd~C~~g~~g~~~~~GC~ 161 (162)
T 1klo_A 132 ---------------QCQCLPHVSGRDCGTCDPGYYNLQSGQGCE 161 (162)
T ss_dssp ---------------CCCBCTTEESTTCCEECTTCBCGGGSSCCB
T ss_pred ---------------EeECCCCCcCCCCCCCCCCcccCCCCCCcC
Confidence 889999999999999999999997 34554
No 2
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.92 E-value=5.6e-26 Score=210.71 Aligned_cols=186 Identities=42% Similarity=1.025 Sum_probs=107.5
Q ss_pred CCCCCCCCCcccchhhhcccC--CCeeccCCCCCCCCCCCCCCCCCCccCCC-----CCCCcCCCCCCCCCCC-cCCC--
Q psy15472 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCTACNCNPIGSLN-LQCN-- 70 (247)
Q Consensus 1 c~C~~h~~~C~~~~~~~~~~~--~~g~C~~C~~~~~G~~Ce~C~~Gy~g~~~-----~~~C~~C~C~~~g~~~-~~c~-- 70 (247)
|.|++|+..|.++..+..... .+++|..|.++|.|.+|++|.++|++... ...+.+|.|+..+... ..|+
T Consensus 318 C~C~~~~~~C~~d~~~c~~~~~~~gg~C~~C~~g~~G~~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~ 397 (525)
T 4aqs_A 318 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGY 397 (525)
T ss_dssp CCCTTSCSEEEECHHHHHHTTSSCCEEEESCCTTEESTTSCEECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCS
T ss_pred cccCCCCCCCCCCcccccccCccCCCcccCCCCCCCCCCcccccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCC
Confidence 578899999998887766654 58899899999999999999999998752 3456677776554432 1222
Q ss_pred -------CCceeeCCCCCcCCCCCCCCCCcccCC---CCCcccccCCCCCCCCCCCCCcCCCCceeccCCCCCCccceee
Q psy15472 71 -------SEGRCQCKPGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140 (247)
Q Consensus 71 -------~~g~C~C~~g~~G~~C~~C~~G~~g~~---~~~C~~C~C~~~g~~~~~~~C~~~tG~C~c~~~~~~g~~~~~~ 140 (247)
..+.|.|+++|.|.+|++|++||||.. ...|.+|+|++.++..+...|++.+
T Consensus 398 ~~~~~~~~~~~C~C~~g~~G~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~t------------------ 459 (525)
T 4aqs_A 398 TDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSET------------------ 459 (525)
T ss_dssp CBGGGTBCSSCCCBCTTEETTTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTT------------------
T ss_pred CCCCcCCCCCccCCCCCCCCCcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCC------------------
Confidence 157899999999999999999999976 2458889998877654433444444
Q ss_pred eeccccCcCCCCCccccCCCCCCCCCCCCCCCCCCccCCCCccccCCCCcccCCCCCCCCCcccCC--CCCCccCCCCCC
Q psy15472 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPA 218 (247)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~C~~~G~C~C~~g~~G~~C~~C~~g~~g~~--~~~C~~C~C~~~ 218 (247)
|+|.|++||+|.+|++|++|||++. .+.|++|+|+++
T Consensus 460 -----------------------------------------g~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~ 498 (525)
T 4aqs_A 460 -----------------------------------------GYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLG 498 (525)
T ss_dssp -----------------------------------------CCBCBCTTCCSTTTCC-----------------------
T ss_pred -----------------------------------------CEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCC
Confidence 4899999999999999999999976 578999999998
Q ss_pred CCCCCCCCCCCCCCeeeCCCCCCCCCCCC
Q psy15472 219 GSVKNTPNCDSVKGQCECKDNVEGAQCRS 247 (247)
Q Consensus 219 g~~~~~~~C~~~tG~C~C~~g~~G~~C~~ 247 (247)
++. ...|++.+|+|+|++||+|++||+
T Consensus 499 gs~--~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 499 GAL--NNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp -----------------------------
T ss_pred Ccc--CCccCCCCCeeECCCCCcCCCCCC
Confidence 876 567999999999999999999985
No 3
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.89 E-value=4.8e-24 Score=168.57 Aligned_cols=132 Identities=32% Similarity=0.784 Sum_probs=102.7
Q ss_pred CCCCCCCCCCcCCC-CCcee-eCCCCCcCCCCCCCCCCcccCCC------CCcccccCCCCCCCCCCCCCcCCCCceecc
Q psy15472 57 CNCNPIGSLNLQCN-SEGRC-QCKPGVTGDKCDRCDVNHYDFGE------AGCKSCECNPAGSVKNTPNCDSVKGQCESA 128 (247)
Q Consensus 57 C~C~~~g~~~~~c~-~~g~C-~C~~g~~G~~C~~C~~G~~g~~~------~~C~~C~C~~~g~~~~~~~C~~~tG~C~c~ 128 (247)
|+|.++++....-. ..++| .|+++|+|.+||+|++|||+.+. ..|++|+|+++++......|++++
T Consensus 1 C~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~t------ 74 (162)
T 1klo_A 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLT------ 74 (162)
T ss_dssp CCSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTT------
T ss_pred CcCcCcCcccccCCCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCC------
Confidence 45666554332211 25799 69999999999999999999763 258899998775432222355444
Q ss_pred CCCCCCccceeeeeccccCcCCCCCccccCCCCCCCCCCCCCCCCCCccCCCCcccc-CCCCcccCCCCCCCCCcccCCC
Q psy15472 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGE 207 (247)
Q Consensus 129 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~C~~~G~C~-C~~g~~G~~C~~C~~g~~g~~~ 207 (247)
|+|+ |+++|+|++||+|++||||...
T Consensus 75 -----------------------------------------------------G~C~~C~~g~~G~~Ce~C~~Gy~g~~~ 101 (162)
T 1klo_A 75 -----------------------------------------------------GECLKCIYNTAGFYCDRCKEGFFGNPL 101 (162)
T ss_dssp -----------------------------------------------------CCBCCBCTTEETTTTCEECTTEEECTT
T ss_pred -----------------------------------------------------CcccCCCCCCcCCCcCcCchhhcCCcc
Confidence 4884 9999999999999999999762
Q ss_pred -----CCCccCCCCCCCCCCCCCCCCCCCCeeeCCCCCCCCCCCC
Q psy15472 208 -----AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247 (247)
Q Consensus 208 -----~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~ 247 (247)
..|++|.|++.+++.+...||+++|+|+|+++|+|++||+
T Consensus 102 ~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd~ 146 (162)
T 1klo_A 102 APNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGT 146 (162)
T ss_dssp CSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCE
T ss_pred ccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCCC
Confidence 4799999999988644458999999999999999999974
No 4
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.85 E-value=5.4e-21 Score=177.26 Aligned_cols=193 Identities=36% Similarity=0.831 Sum_probs=137.6
Q ss_pred CCCCCCCCCcccchhhhccc-C-CCeeccCCCCCCCCCCCCCCCCCCccCCC-------CCCCcCCCCCCCCCCC-----
Q psy15472 1 CNCNGFSNRCFFDKELYNRT-G-HGGHCLDCQGDRDGPNCEKCRDNYYQKSG-------DNFCTACNCNPIGSLN----- 66 (247)
Q Consensus 1 c~C~~h~~~C~~~~~~~~~~-~-~~g~C~~C~~~~~G~~Ce~C~~Gy~g~~~-------~~~C~~C~C~~~g~~~----- 66 (247)
|.||+|+..|.......... + ..++| .|++||+|.+||+|.++|++.+. ...+..|.|+.++..-
T Consensus 254 C~CnGHa~~C~p~~g~~~~~~g~~~g~C-~C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~~C~C~~~~~~C~~d~~ 332 (525)
T 4aqs_A 254 CFCYGHASECAPVDGVNEEVEGMVHGHC-MCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMA 332 (525)
T ss_dssp CCCTTBCSCEECC------CCSCCCCEE-CCCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCCCCCCTTSCSEEEECHH
T ss_pred eccCCccccCCCcCCcccCCCCCcCccc-cCcCCCcCCCCcCCCCccCCCccCCCcccCCCcccccccCCCCCCCCCCcc
Confidence 78999999997543221111 1 46889 69999999999999999998752 3456677887665421
Q ss_pred ----cCCCCCceee-CCCCCcCCCCCCCCCCcccCCC------CCcccccCCCCCCCCCCCCCcCCCCceeccCCCCCCc
Q psy15472 67 ----LQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGE------AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135 (247)
Q Consensus 67 ----~~c~~~g~C~-C~~g~~G~~C~~C~~G~~g~~~------~~C~~C~C~~~g~~~~~~~C~~~tG~C~c~~~~~~g~ 135 (247)
..+...+.|. |.++|+|.+|++|.++|++.+. ..+.+|.|...+.... ..|+...
T Consensus 333 ~c~~~~~~~gg~C~~C~~g~~G~~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~-~~C~~~~------------- 398 (525)
T 4aqs_A 333 VFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENG-GICDGYT------------- 398 (525)
T ss_dssp HHHHTTSSCCEEEESCCTTEESTTSCEECTTEEECSSSCTTCTTCEEECCCCTTTBSGG-GCCCCSC-------------
T ss_pred cccccCccCCCcccCCCCCCCCCCcccccCcccccCCCCCCCCCCCcCCCCCCCCCCCC-ccccCCC-------------
Confidence 1122367775 9999999999999999998652 1234455444322110 0011100
Q ss_pred cceeeeeccccCcCCCCCccccCCCCCCCCCCCCCCCCCCccCC-CCccccCCCCcccCCCCCCCCCcccCC---CCCCc
Q psy15472 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFG---EAGCK 211 (247)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~C~-~~G~C~C~~g~~G~~C~~C~~g~~g~~---~~~C~ 211 (247)
...+. ..+.|.|+++|.|.+|++|++||||.. ...|.
T Consensus 399 ---------------------------------------~~~~~~~~~~C~C~~g~~G~~C~~C~~Gy~G~~c~~~~~C~ 439 (525)
T 4aqs_A 399 ---------------------------------------DFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYGCK 439 (525)
T ss_dssp ---------------------------------------BGGGTBCSSCCCBCTTEETTTTCEECTTEECCCTTSTTSSE
T ss_pred ---------------------------------------CCCcCCCCCccCCCCCCCCCcccCCCCCCcCCCCCCCCCCc
Confidence 00111 245899999999999999999999987 45799
Q ss_pred cCCCCCCCCCCCCCCCCCCCCeeeCCCCCCCCCCCC
Q psy15472 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247 (247)
Q Consensus 212 ~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~ 247 (247)
+|.|++.++..+...|++.+|+|+|++||+|.+|++
T Consensus 440 ~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~ 475 (525)
T 4aqs_A 440 SCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ 475 (525)
T ss_dssp ECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC
T ss_pred cCCCCCCceecCCCcccCCCCEEECCCCCcCCCccc
Confidence 999999999877889999999999999999999973
No 5
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.64 E-value=2.2e-16 Score=142.34 Aligned_cols=129 Identities=30% Similarity=0.815 Sum_probs=93.2
Q ss_pred CCCCCCccCCCCCCCcCCCCCCCCCCCcCCCC-CceeeCCCCCcCCCCCC-CCCCcccCCCCCcc-cccCCCCCCCCCCC
Q psy15472 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTP 116 (247)
Q Consensus 40 ~C~~Gy~g~~~~~~C~~C~C~~~g~~~~~c~~-~g~C~C~~g~~G~~C~~-C~~G~~g~~~~~C~-~C~C~~~g~~~~~~ 116 (247)
.|++||||+.+...|.+ |.++| .|+. +++|+|++||+|.+|++ |.++|||.. |. +|.++ +.
T Consensus 188 ~C~~g~~G~~C~~~C~~--C~~~G----~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~---C~~~C~~~--~~----- 251 (423)
T 2gy5_A 188 RCEAQKWGPECNHLCTA--CMNNG----VCHEDTGECICPPGFMGRTCEKACELHTFGRT---CKERCSGQ--EG----- 251 (423)
T ss_dssp SSCTTEESTTSCEECCC--CCTTC----EECTTTCCEECCTTEESTTSCEECCTTEESTT---SCEECCST--TT-----
T ss_pred cCCCCCCCCCCCCCCCC--CCCCC----EEECCCCcEeCCCCccCCCcccccCCCCCCCC---cCccCCCC--CC-----
Confidence 58888888766555543 44544 5665 89999999999999996 999999875 44 34322 11
Q ss_pred CCcCCCCceeccCCCCCCccceeeeeccccCcCCCCCccccCCCCCCCCCCCCCCCCCCccCCCCccccCCCCcccCCCC
Q psy15472 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196 (247)
Q Consensus 117 ~C~~~tG~C~c~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~C~~~G~C~C~~g~~G~~C~ 196 (247)
|.. .+.|. . .+++|.|++||+|..|+
T Consensus 252 -C~~-~g~C~------------------------------------~----------------~~~~C~C~~G~~G~~C~ 277 (423)
T 2gy5_A 252 -CKS-YVFCL------------------------------------P----------------DPYGCSCATGWKGLQCN 277 (423)
T ss_dssp -TTT-CCEEE------------------------------------T----------------TTTEEECCBTCBSGGGC
T ss_pred -CCC-CCEEC------------------------------------C----------------CCCeEEeCCCccccccc
Confidence 321 12221 0 13499999999999999
Q ss_pred C-CCCCcccCCCCCCccCCCCCCCCCCCCCCCCCCCCeeeCCCCCCCCCCCC
Q psy15472 197 R-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247 (247)
Q Consensus 197 ~-C~~g~~g~~~~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~ 247 (247)
. |++||+|.... .+|+|.+++ .|+..++ |.|++||+|.+|+.
T Consensus 278 ~~C~~G~~G~~C~--~~C~C~ngg------~C~~~~~-C~C~~G~~G~~Ce~ 320 (423)
T 2gy5_A 278 EACHPGFYGPDCK--LRCSCNNGE------MCDRFQG-CLCSPGWQGLQCER 320 (423)
T ss_dssp BCCCTTBCSBTTC--CBCCCTTCC------EEETTTE-EECCTTCBSTTSCB
T ss_pred CccCCCCcCCccc--ccccCCCCC------EecCCCc-eECCCCCcCCCCcc
Confidence 7 99999997622 267888754 5887666 99999999999973
No 6
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=99.62 E-value=2.2e-16 Score=140.17 Aligned_cols=93 Identities=27% Similarity=0.658 Sum_probs=75.1
Q ss_pred CCCCCCCCCcccchhhhcccCCCeeccCCCCCCCCCCCCCCCCCCccCC-------CCCCCcCCCCCCCCCCCc------
Q psy15472 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-------GDNFCTACNCNPIGSLNL------ 67 (247)
Q Consensus 1 c~C~~h~~~C~~~~~~~~~~~~~g~C~~C~~~~~G~~Ce~C~~Gy~g~~-------~~~~C~~C~C~~~g~~~~------ 67 (247)
|+||+|+.+|.++... ....|+| .|++||+|.+||+|++||||.+ ....|++|+|++++..-.
T Consensus 266 C~CnGHA~~C~~~~~~---~~~~g~C-~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~ 341 (403)
T 2y38_A 266 CVCHGHADVCDAKDPL---DPFRLQC-ACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVD 341 (403)
T ss_dssp CCCTTBCSCEEESCTT---STTCEEE-CCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHH
T ss_pred cccCCCccccCCCCCC---CccceEe-ECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccc
Confidence 7899999999754211 1136899 6999999999999999999974 356899999998865210
Q ss_pred ---------CC-CCCceee-CCCCCcCCCCCCCCCCcccCC
Q psy15472 68 ---------QC-NSEGRCQ-CKPGVTGDKCDRCDVNHYDFG 97 (247)
Q Consensus 68 ---------~c-~~~g~C~-C~~g~~G~~C~~C~~G~~g~~ 97 (247)
.+ ..+|+|+ |+++++|++||+|++||||.+
T Consensus 342 ~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC~~GYyg~p 382 (403)
T 2y38_A 342 RREASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAP 382 (403)
T ss_dssp HTTCCCCTTSCSCCCEEESSCCSSEESTTSCEECTTCEECT
T ss_pred cccccccccccCCCCCCCCCCcCcCcCCCCCcCCCCccCCC
Confidence 01 2389997 999999999999999999987
No 7
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=99.53 E-value=2.6e-15 Score=132.70 Aligned_cols=99 Identities=27% Similarity=0.779 Sum_probs=79.3
Q ss_pred CCCCCCCCCcccchhhhcccCCCeeccCCCCCCCCCCCCCCCCCCccCC-------CCCCCcCCCCCCCCCCCc------
Q psy15472 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-------GDNFCTACNCNPIGSLNL------ 67 (247)
Q Consensus 1 c~C~~h~~~C~~~~~~~~~~~~~g~C~~C~~~~~G~~Ce~C~~Gy~g~~-------~~~~C~~C~C~~~g~~~~------ 67 (247)
|.||+|+..|..+.. .++.| .|++||+|.+||+|.+|||+.+ ....|.+|.|+.+++...
T Consensus 255 C~Cngh~s~c~~~~~------~~~~C-~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~ 327 (375)
T 4aqt_A 255 CKCNGHASECVKNEF------DKLMC-NCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELY 327 (375)
T ss_dssp ECCTTSCSCEEECTT------SCEEE-CCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHH
T ss_pred ecCCCCCcccCCCCC------CCeee-eCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccC
Confidence 689999999876542 36778 6999999999999999999985 346799999998876421
Q ss_pred CCC-CCceee-CCCCCcCCCCCCCCCCcccCC-CCCcccccC
Q psy15472 68 QCN-SEGRCQ-CKPGVTGDKCDRCDVNHYDFG-EAGCKSCEC 106 (247)
Q Consensus 68 ~c~-~~g~C~-C~~g~~G~~C~~C~~G~~g~~-~~~C~~C~C 106 (247)
.++ .+|+|. |++||+|++|++|++|||+++ ...|+||.-
T Consensus 328 ~c~~~~G~C~~C~~n~~G~~Ce~C~~Gyyg~~~~~~C~pCaA 369 (375)
T 4aqt_A 328 RSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPAAA 369 (375)
T ss_dssp HHSSCCEEECSCTTTEESTTSCEECSSEECCTTCSSCEEC--
T ss_pred ccCCCCCCCCCCCCCCcCCCCCCCCcCcccCcCCCCCcCCcC
Confidence 223 489996 999999999999999999986 456887753
No 8
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.46 E-value=1.8e-14 Score=129.89 Aligned_cols=94 Identities=28% Similarity=0.665 Sum_probs=66.9
Q ss_pred CeeccCCCCCCCCCCCCC-CCCCCccCCCCCCCcCCCCCCCCCCCcCCCC-CceeeCCCCCcCCCCCC-CCCCcccCCCC
Q psy15472 23 GGHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEA 99 (247)
Q Consensus 23 ~g~C~~C~~~~~G~~Ce~-C~~Gy~g~~~~~~C~~C~C~~~g~~~~~c~~-~g~C~C~~g~~G~~C~~-C~~G~~g~~~~ 99 (247)
+++| .|+++|+|.+||+ |.++|||..+.+ +|.+++.......|+. +++|.|++||+|.+|+. |++||+|..
T Consensus 215 ~g~C-~C~~G~~G~~Ce~~C~~g~~g~~C~~---~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~-- 288 (423)
T 2gy5_A 215 TGEC-ICPPGFMGRTCEKACELHTFGRTCKE---RCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPD-- 288 (423)
T ss_dssp TCCE-ECCTTEESTTSCEECCTTEESTTSCE---ECCSTTTTTTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSBT--
T ss_pred CCcE-eCCCCccCCCcccccCCCCCCCCcCc---cCCCCCCCCCCCEECCCCCeEEeCCCcccccccCccCCCCcCCc--
Confidence 6899 5999999999997 999999985443 3333322222234554 89999999999999996 999999975
Q ss_pred Ccc-cccCCCCCCCCCCCCCcCCCCceeccCC
Q psy15472 100 GCK-SCECNPAGSVKNTPNCDSVKGQCESAQL 130 (247)
Q Consensus 100 ~C~-~C~C~~~g~~~~~~~C~~~tG~C~c~~~ 130 (247)
|. +|+|.++++ |+...+ |+|+++
T Consensus 289 -C~~~C~C~ngg~------C~~~~~-C~C~~G 312 (423)
T 2gy5_A 289 -CKLRCSCNNGEM------CDRFQG-CLCSPG 312 (423)
T ss_dssp -TCCBCCCTTCCE------EETTTE-EECCTT
T ss_pred -ccccccCCCCCE------ecCCCc-eECCCC
Confidence 43 567766542 654443 555443
No 9
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.39 E-value=6.7e-14 Score=124.75 Aligned_cols=106 Identities=30% Similarity=0.705 Sum_probs=43.2
Q ss_pred CCCCCCCCCcccchhhhcccCCCeeccCCCCCCCCCCCCCCCCCCccCC------------CCCCCcCCCCCCCCCCCcC
Q psy15472 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS------------GDNFCTACNCNPIGSLNLQ 68 (247)
Q Consensus 1 c~C~~h~~~C~~~~~~~~~~~~~g~C~~C~~~~~G~~Ce~C~~Gy~g~~------------~~~~C~~C~C~~~g~~~~~ 68 (247)
|+||+|+..|..+.. +++|+ |++||+|++||+|.+||++.+ ...+|++|+|+.++. .
T Consensus 297 C~CnGHas~C~~~~g-------~~~C~-C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~---~ 365 (426)
T 3zyj_B 297 CKCNLHATVCVYDNS-------KLTCE-CEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTN---V 365 (426)
T ss_dssp ECCSSSCSCEEEETT-------EEEEC-CCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------
T ss_pred CcCCCchhhcCCCCC-------Cceee-CCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcC---c
Confidence 789999999986542 68995 999999999999999998754 245799999987653 5
Q ss_pred CCC-Cceee----CCCCCcCCCCCCCCCCcccCCCCCcccccCCCCCCCCCCCCCcCCCCceeccCC
Q psy15472 69 CNS-EGRCQ----CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130 (247)
Q Consensus 69 c~~-~g~C~----C~~g~~G~~C~~C~~G~~g~~~~~C~~C~C~~~g~~~~~~~C~~~tG~C~c~~~ 130 (247)
|+. ++.|. |..++ +| +|++||+|.. |+.|.|++.|+ |+..+|+|.-+.+
T Consensus 366 CD~~t~~C~ngg~C~~~~---~C-~C~~G~~G~~---Ce~c~C~~~g~------C~~~~Gqc~~~~~ 419 (426)
T 3zyj_B 366 CDNELLHCQNGGTCHNNV---RC-LCPAAYTGIL---CEKLRCEEAGS------CGSDSGQGAPPHG 419 (426)
T ss_dssp -------------------------------------------------------------------
T ss_pred cccCcccCCCCCCcCCCC---CC-cCCCCCcCCC---CcCCCCCCCCc------ccCCCCccCCCCC
Confidence 665 66776 77766 88 8999999875 88899998764 9999999987654
No 10
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=99.35 E-value=1.3e-13 Score=121.73 Aligned_cols=115 Identities=27% Similarity=0.616 Sum_probs=79.1
Q ss_pred CCccCCCCCCCcCCCCCCCCCCCcCCCC-CceeeCCCCCcCCCCCCCCCCcccCC--------CCCcccccCCCCCCCCC
Q psy15472 44 NYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFG--------EAGCKSCECNPAGSVKN 114 (247)
Q Consensus 44 Gy~g~~~~~~C~~C~C~~~g~~~~~c~~-~g~C~C~~g~~G~~C~~C~~G~~g~~--------~~~C~~C~C~~~g~~~~ 114 (247)
-||......+-..|.|+++++....+.. .+.|.|+++|+|.+|++|.+|||+++ ...|++|+|+..++.
T Consensus 242 yyYai~di~v~g~C~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~-- 319 (375)
T 4aqt_A 242 YYYAISDFAVGGRCKCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQE-- 319 (375)
T ss_dssp CCCEEEEEEEEEEECCTTSCSCEEECTTSCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSC--
T ss_pred ceeeecccccCceecCCCCCcccCCCCCCCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCC--
Confidence 3554444444556889988875544444 67899999999999999999999985 124666666554321
Q ss_pred CCCCcCCCCceeccCCCCCCccceeeeeccccCcCCCCCccccCCCCCCCCCCCCCCCCCCccC-CCCccc-cCCCCccc
Q psy15472 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRC-QCKPGVTG 192 (247)
Q Consensus 115 ~~~C~~~tG~C~c~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~C-~~~G~C-~C~~g~~G 192 (247)
|..... . ..| ..+|+| .|++||+|
T Consensus 320 ---C~~d~~--------------------------------------------------~-~~c~~~~G~C~~C~~n~~G 345 (375)
T 4aqt_A 320 ---CYFDPE--------------------------------------------------L-YRSTGHGGHCTNCRDNTDG 345 (375)
T ss_dssp ---EEECHH--------------------------------------------------H-HHHSSCCEEECSCTTTEES
T ss_pred ---cccccc--------------------------------------------------c-CccCCCCCCCCCCCCCCcC
Confidence 110000 0 011 136799 59999999
Q ss_pred CCCCCCCCCcccCC-CCCCccCC
Q psy15472 193 DKCDRCDVNHYDFG-EAGCKSCE 214 (247)
Q Consensus 193 ~~C~~C~~g~~g~~-~~~C~~C~ 214 (247)
++||+|++|||+++ ...|++|.
T Consensus 346 ~~Ce~C~~Gyyg~~~~~~C~pCa 368 (375)
T 4aqt_A 346 AKCERCRENFFRLGNTEACSPAA 368 (375)
T ss_dssp TTSCEECSSEECCTTCSSCEEC-
T ss_pred CCCCCCCcCcccCcCCCCCcCCc
Confidence 99999999999987 56788775
No 11
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=99.18 E-value=6.7e-12 Score=111.46 Aligned_cols=114 Identities=24% Similarity=0.582 Sum_probs=74.7
Q ss_pred CCCCccCCCCCCCcCCCCCCCCCCCcCCC------C-CceeeCCCCCcCCCCCCCCCCcccCC--------CCCcccccC
Q psy15472 42 RDNYYQKSGDNFCTACNCNPIGSLNLQCN------S-EGRCQCKPGVTGDKCDRCDVNHYDFG--------EAGCKSCEC 106 (247)
Q Consensus 42 ~~Gy~g~~~~~~C~~C~C~~~g~~~~~c~------~-~g~C~C~~g~~G~~C~~C~~G~~g~~--------~~~C~~C~C 106 (247)
+.-||......+-.+|.|++++. .|+ . .++|.|+++++|.+||+|++|||+.+ ...|++|+|
T Consensus 251 ~~yyyai~~~~vgg~C~CnGHA~---~C~~~~~~~~~~g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~C 327 (403)
T 2y38_A 251 RRYYYSIKDISIGGRCVCHGHAD---VCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNC 327 (403)
T ss_dssp GGCCCEEEEEEEEEECCCTTBCS---CEEESCTTSTTCEEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCC
T ss_pred ccceeecccCccccccccCCCcc---ccCCCCCCCccceEeECcCcCcCCCCCCCCccccCCcccccccCCCcccccccc
Confidence 33444433333345789998875 232 1 58899999999999999999999974 246999999
Q ss_pred CCCCCCCCCCCC--cCCCCceeccCCCCCCccceeeeeccccCcCCCCCccccCCCCCCCCCCCCCCCCCCccCCCCccc
Q psy15472 107 NPAGSVKNTPNC--DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC 184 (247)
Q Consensus 107 ~~~g~~~~~~~C--~~~tG~C~c~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~C~~~G~C 184 (247)
+.+++ .| ++..... . + ..........+|+|
T Consensus 328 nghs~-----~C~~d~~~~~~---~----------------------~------------------s~~~~~~~~~~G~C 359 (403)
T 2y38_A 328 HGHAY-----DCYYDPEVDRR---E----------------------A------------------SQNQDNVYQGGGVC 359 (403)
T ss_dssp TTSCS-----CEEECHHHHHT---T----------------------C------------------CCCTTSCSCCCEEE
T ss_pred CCCCc-----ccccCcccccc---c----------------------c------------------cccccccCCCCCCC
Confidence 87643 24 1100000 0 0 00000001136799
Q ss_pred c-CCCCcccCCCCCCCCCcccCC
Q psy15472 185 Q-CKPGVTGDKCDRCDVNHYDFG 206 (247)
Q Consensus 185 ~-C~~g~~G~~C~~C~~g~~g~~ 206 (247)
. |+.+++|.+||+|++||||.+
T Consensus 360 ~~C~~nt~G~~CErC~~GYyg~p 382 (403)
T 2y38_A 360 LDCQHHTTGINCERCLPGFFRAP 382 (403)
T ss_dssp SSCCSSEESTTSCEECTTCEECT
T ss_pred CCCcCcCcCCCCCcCCCCccCCC
Confidence 5 999999999999999999987
No 12
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.13 E-value=4.7e-12 Score=112.91 Aligned_cols=74 Identities=23% Similarity=0.484 Sum_probs=46.0
Q ss_pred CCccCCCCCCCcCCCCCCCCCCCcCCCC---CceeeCCCCCcCCCCCCCCCCcccCCC-------------CCcccccCC
Q psy15472 44 NYYQKSGDNFCTACNCNPIGSLNLQCNS---EGRCQCKPGVTGDKCDRCDVNHYDFGE-------------AGCKSCECN 107 (247)
Q Consensus 44 Gy~g~~~~~~C~~C~C~~~g~~~~~c~~---~g~C~C~~g~~G~~C~~C~~G~~g~~~-------------~~C~~C~C~ 107 (247)
-||......+..+|.|+++++ .|+. +++|.|+++++|.+||+|.+|||+.+. ..|++|+|+
T Consensus 284 yyYAI~d~~v~g~C~CnGHas---~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn 360 (426)
T 3zyj_B 284 YFYAISDIKVRGRCKCNLHAT---VCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISS 360 (426)
T ss_dssp CCCEEEEEECEEEECCSSSCS---CEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-
T ss_pred ecceeecccccccCcCCCchh---hcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCC
Confidence 456555566778899998875 3443 479999999999999999999997641 237777776
Q ss_pred CCCCCCCCCCCcCCCCce
Q psy15472 108 PAGSVKNTPNCDSVKGQC 125 (247)
Q Consensus 108 ~~g~~~~~~~C~~~tG~C 125 (247)
..+. .|++.++.|
T Consensus 361 ~~g~-----~CD~~t~~C 373 (426)
T 3zyj_B 361 IGTN-----VCDNELLHC 373 (426)
T ss_dssp ------------------
T ss_pred CCcC-----ccccCcccC
Confidence 6542 377666644
No 13
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.10 E-value=3.7e-11 Score=95.12 Aligned_cols=147 Identities=27% Similarity=0.611 Sum_probs=86.1
Q ss_pred CeeccCCCCCCCCCCCCC-CCCCCccCCCCCCCcCCCCCCCCCCCcCCCCCceeeCCCCCcCCCCCC--CCCCcccCCCC
Q psy15472 23 GGHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR--CDVNHYDFGEA 99 (247)
Q Consensus 23 ~g~C~~C~~~~~G~~Ce~-C~~Gy~g~~~~~~C~~C~C~~~g~~~~~c~~~g~C~C~~g~~G~~C~~--C~~G~~g~~~~ 99 (247)
..+| .|.++|+|..|+. |.+. ..|.++ ..|+.+++|+|++||+|..|+. |..
T Consensus 16 ~~~c-~C~~g~~G~~C~~~C~~~------------~~c~~~----g~C~~~g~C~C~~G~~G~~C~~~~C~~-------- 70 (169)
T 2vj2_A 16 RSAV-TCDDYYYGFGCNKFCRPR------------DDFFGH----YACDQNGNKTCMEGWMGPECNRAICRQ-------- 70 (169)
T ss_dssp ------CCTTEETTTTCEECCCE------------EETTEE----EEECSSCCEEECTTEESTTSCEECCCT--------
T ss_pred Ceee-eCCCcCcCCCcccccCCC------------CCcCCC----CEeCCCCeeECCCCCcCCCCCCCCCCC--------
Confidence 6677 5888888877753 2210 012222 3566688999999999999974 221
Q ss_pred CcccccCCCCCCCCCCCCCcCCCCceeccCCCCCCccceeeeeccccCcCCCCCccccCCCCCCCCCCCCCCCCCCccCC
Q psy15472 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179 (247)
Q Consensus 100 ~C~~C~C~~~g~~~~~~~C~~~tG~C~c~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~C~ 179 (247)
.|.+ .+++ |.. +++|+|++++.+.. +++ |... + .-...+|.
T Consensus 71 ---~C~~-~~g~------C~~-~~~C~C~~G~~G~~-C~~---------------------C~~~--~----~C~~g~C~ 111 (169)
T 2vj2_A 71 ---GCSP-KHGS------CKL-PGDCRCQYGWQGLY-CDK---------------------CIPH--P----GCVHGICN 111 (169)
T ss_dssp ---TCCT-TTEE------CSS-TTCCEECTTEESSS-SCE---------------------ECCC--T----TCSSEECS
T ss_pred ---CCCC-CCcc------cCC-CCeeECCCCCCCCC-ccc---------------------CCCC--C----CCCCCCcC
Confidence 1322 2332 553 68899988754322 211 1110 0 00012455
Q ss_pred CCccccCCCCcccCCCCCCCCCcccCCCCCCcc-CCCCCCCCCCCCCCCCC---CCCeeeCCCCCCCCCCCC
Q psy15472 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDS---VKGQCECKDNVEGAQCRS 247 (247)
Q Consensus 180 ~~G~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~-C~C~~~g~~~~~~~C~~---~tG~C~C~~g~~G~~C~~ 247 (247)
..++|.|++||+|..|++- .+.|.. .+|.+++ +|.. .+++|+|++||+|++|+.
T Consensus 112 ~~~~C~C~~G~~G~~C~~~--------~~~C~~~~~C~~~g------~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 112 EPWQCLCETNWGGQLCDKD--------LNYCGTHQPCLNGG------TCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp STTCCEECTTEETTTTCEE--------SCHHHHTCCCCTTC------EEEECSTTCEEEECCTTCCSTTSCC
T ss_pred CCCEEeCCCCCCCCcccCC--------CCCCCCCCCCCCCC------EEcCCCCCCcEeECCCCCcCcCcCC
Confidence 5679999999999999741 223443 4576654 3653 346999999999999974
No 14
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.10 E-value=5e-11 Score=112.72 Aligned_cols=58 Identities=31% Similarity=0.787 Sum_probs=42.0
Q ss_pred CeeccCCCCCCCCCCCCCCCCCCccCCC-CCCCcCCC----CCCCCCCCcCCCCCceeeCC------CCCcCCCCC
Q psy15472 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTACN----CNPIGSLNLQCNSEGRCQCK------PGVTGDKCD 87 (247)
Q Consensus 23 ~g~C~~C~~~~~G~~Ce~C~~Gy~g~~~-~~~C~~C~----C~~~g~~~~~c~~~g~C~C~------~g~~G~~C~ 87 (247)
.|+| .|.+||+|.+|| |..++++... ...|.+.. |+++| .|. .|+|.|+ +||+|.+|+
T Consensus 445 ~g~C-~C~~Gy~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Cs~~G----~C~-~G~C~C~~~~~~~~G~~G~~Ce 513 (687)
T 3k6s_B 445 CGIC-RCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLG----DCV-CGQCLCHTSDVPGKLIYGQYCE 513 (687)
T ss_dssp SSSE-EECSSEESTTSC-EESSSCCCSGGGSTTSSSTTSCGGGSSE----EEE-TTEEEECCCCSTTCCEESTTSC
T ss_pred CCEe-EcCCCCcCCccc-ccCCcCCccccCCCCCCCCCCCcCCCCC----EEe-CCEEEcCCCCCCCCCccccccc
Confidence 5789 599999999998 7777776542 22465432 44443 444 4799999 999999997
No 15
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.09 E-value=1.5e-10 Score=100.81 Aligned_cols=22 Identities=23% Similarity=0.886 Sum_probs=0.0
Q ss_pred CCCCCCCCeeeCCCCCCCCCCCC
Q psy15472 225 PNCDSVKGQCECKDNVEGAQCRS 247 (247)
Q Consensus 225 ~~C~~~tG~C~C~~g~~G~~C~~ 247 (247)
+.|+. +++|.|++||+|++|+.
T Consensus 287 g~C~~-~~~C~C~~G~~G~~C~~ 308 (324)
T 2ygq_A 287 GTCHE-PNKCQCQEGWHGRHCNK 308 (324)
T ss_dssp -----------------------
T ss_pred CEECC-CCEeECCCCCcCCCCCC
Confidence 44764 68999999999999973
No 16
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.97 E-value=8.7e-10 Score=104.45 Aligned_cols=133 Identities=29% Similarity=0.676 Sum_probs=72.6
Q ss_pred CeeccCCCCCCCCCCCCCCCCCCccCCCCCCCcCCC----CCCCCCCCcCCCCCceeeCC----CCCcCCCCCC----CC
Q psy15472 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN----CNPIGSLNLQCNSEGRCQCK----PGVTGDKCDR----CD 90 (247)
Q Consensus 23 ~g~C~~C~~~~~G~~Ce~C~~Gy~g~~~~~~C~~C~----C~~~g~~~~~c~~~g~C~C~----~g~~G~~C~~----C~ 90 (247)
.|+| .|.+||+|.+|| +..++++....+.|..-. |.++| .|. .|+|.|+ +||+|.+|+. |.
T Consensus 457 ~G~C-~C~~Gy~G~~Ce-~~~~~~~~~~~~~C~~~~~~~~Cs~~G----~C~-~g~C~C~~~~~~Gy~G~~Ce~~~~~C~ 529 (690)
T 3fcs_B 457 CGVC-RCGPGWLGSQCE-CSEEDYRPSQQDECSPREGQPVCSQRG----ECL-CGQCVCHSSDFGKITGKYCECDDFSCV 529 (690)
T ss_dssp TTEE-EECTTCCSSSSC-CSCC------CCCCSSSSSSCGGGGSE----EEC-SSSEEECCCSSCCCBSTTSCBCSSCCC
T ss_pred CCce-EeCCCccCCcee-eccCccCCccCCcCCCCCCCCCCCCCC----EEE-CCeeEeecCCCCCeeCCCcCcccCcCc
Confidence 4668 599999999995 566777665556666532 54444 444 4899999 9999999973 33
Q ss_pred CCcccCCCCCcccccCCCCCCCCCCCCCcCCCCceeccCCCCCCccceeeeeccccCcCCCCCccccCCCCCCCCCCCCC
Q psy15472 91 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170 (247)
Q Consensus 91 ~G~~g~~~~~C~~C~C~~~g~~~~~~~C~~~tG~C~c~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 170 (247)
.. .+ -.|.++| .|.. ++|.|.+++.+..+.... . -..|.... ..
T Consensus 530 ~~-~~--------~~C~~~G------~C~~--g~C~C~~Gy~G~~CeC~~------~----------~~~C~~~~---g~ 573 (690)
T 3fcs_B 530 RY-KG--------EMCSGHG------QCSC--GDCLCDSDWTGYYCNCTT------R----------TDTCMSSN---GL 573 (690)
T ss_dssp BS-SS--------SBGGGSE------EEET--TEEEECTTEESSSSCEEC------C----------CTTTBCTT---SS
T ss_pred CC-CC--------CCCCCCC------EecC--CeeECcCCCcCCCCccCC------C----------CCcccCCC---CC
Confidence 11 00 1234443 2643 889998865433221000 0 00111100 00
Q ss_pred CCCCCccCCCCccccC-CCCcccCCCCCCC
Q psy15472 171 GGSLNLQCNSEGRCQC-KPGVTGDKCDRCD 199 (247)
Q Consensus 171 ~~~~~~~C~~~G~C~C-~~g~~G~~C~~C~ 199 (247)
.-+....|. .++|.| ++||+|..|+.|+
T Consensus 574 ~C~~~G~C~-~g~C~C~~~Gy~G~~Ce~C~ 602 (690)
T 3fcs_B 574 LCSGRGKCE-CGSCVCIQPGSYGDTCEKCP 602 (690)
T ss_dssp BTSSSCEEE-TTEEECCSTTCBSTTSCBCT
T ss_pred CCCCCCEEe-CCEEECCCCCccCCCcCcCC
Confidence 001112332 368999 9999999998863
No 17
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.81 E-value=4.8e-09 Score=99.41 Aligned_cols=126 Identities=30% Similarity=0.713 Sum_probs=67.2
Q ss_pred CceeeCCCCCcCCCCCCCCCCcccCC-CCCcccc----cCCCCCCCCCCCCCcCCCCceecc----CCCCCCccceeeee
Q psy15472 72 EGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSC----ECNPAGSVKNTPNCDSVKGQCESA----QLSSRGRVHTELRV 142 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~C~~G~~g~~-~~~C~~C----~C~~~g~~~~~~~C~~~tG~C~c~----~~~~~g~~~~~~~~ 142 (247)
.|+|.|++||+|.+|+ +..++++.. .+.|..- .|.++|+ |. .++|+|. +++
T Consensus 457 ~G~C~C~~Gy~G~~Ce-~~~~~~~~~~~~~C~~~~~~~~Cs~~G~------C~--~g~C~C~~~~~~Gy----------- 516 (690)
T 3fcs_B 457 CGVCRCGPGWLGSQCE-CSEEDYRPSQQDECSPREGQPVCSQRGE------CL--CGQCVCHSSDFGKI----------- 516 (690)
T ss_dssp TTEEEECTTCCSSSSC-CSCC------CCCCSSSSSSCGGGGSEE------EC--SSSEEECCCSSCCC-----------
T ss_pred CCceEeCCCccCCcee-eccCccCCccCCcCCCCCCCCCCCCCCE------EE--CCeeEeecCCCCCe-----------
Confidence 4669999999999995 566665543 2335432 1555443 65 4889988 443
Q ss_pred ccccCcCCCCCccccCCCCCCCCCCCCC----CCCCCccCCCCccccCCCCcccCCCCCCCCCcccCCCCCCcc---CCC
Q psy15472 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGH----GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS---CEC 215 (247)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~C~~~~~~~~~----~~~~~~~C~~~G~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~---C~C 215 (247)
.+..|+.+...... ..+....|.. |+|.|++||+|..|+ |+. ....|.. ..|
T Consensus 517 --------------~G~~Ce~~~~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy~G~~Ce-C~~-----~~~~C~~~~g~~C 575 (690)
T 3fcs_B 517 --------------TGKYCECDDFSCVRYKGEMCSGHGQCSC-GDCLCDSDWTGYYCN-CTT-----RTDTCMSSNGLLC 575 (690)
T ss_dssp --------------BSTTSCBCSSCCCBSSSSBGGGSEEEET-TEEEECTTEESSSSC-EEC-----CCTTTBCTTSSBT
T ss_pred --------------eCCCcCcccCcCcCCCCCCCCCCCEecC-CeeECcCCCcCCCCc-cCC-----CCCcccCCCCCCC
Confidence 33333321110000 0001233433 799999999999998 211 0112322 235
Q ss_pred CCCCCCCCCCCCCCCCCeeeC-CCCCCCCCCC
Q psy15472 216 NPAGSVKNTPNCDSVKGQCEC-KDNVEGAQCR 246 (247)
Q Consensus 216 ~~~g~~~~~~~C~~~tG~C~C-~~g~~G~~C~ 246 (247)
.++| .|. .|+|.| ++||+|..|+
T Consensus 576 ~~~G------~C~--~g~C~C~~~Gy~G~~Ce 599 (690)
T 3fcs_B 576 SGRG------KCE--CGSCVCIQPGSYGDTCE 599 (690)
T ss_dssp SSSC------EEE--TTEEECCSTTCBSTTSC
T ss_pred CCCC------EEe--CCEEECCCCCccCCCcC
Confidence 4443 353 367777 7777777775
No 18
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.76 E-value=5.1e-09 Score=91.07 Aligned_cols=21 Identities=43% Similarity=1.084 Sum_probs=16.2
Q ss_pred CCCCCceeeCCCCCcCCCCCC
Q psy15472 68 QCNSEGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 68 ~c~~~g~C~C~~g~~G~~C~~ 88 (247)
.|...+.|.|++||+|.+|+.
T Consensus 192 ~C~~~~~C~C~~G~~G~~C~~ 212 (324)
T 2ygq_A 192 LCVTPGFCICPPGFYGVNCDK 212 (324)
T ss_dssp EECSSCCEECCTTCBTTTTCB
T ss_pred EEcCCCEEeCCCCccCCCccc
Confidence 455578888888888888863
No 19
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.69 E-value=4.6e-09 Score=82.93 Aligned_cols=112 Identities=22% Similarity=0.479 Sum_probs=65.4
Q ss_pred CceeeCCCCCcCCCCCC-CCCCcccCCCCCcccccCCCCCCCCCCCCCcCCCCceeccCCCCCCccceeeeeccccCcCC
Q psy15472 72 EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~-C~~G~~g~~~~~C~~C~C~~~g~~~~~~~C~~~tG~C~c~~~~~~g~~~~~~~~~~~~~~~~ 150 (247)
...|+|++||+|..|+. |.+. -.|..++ .|+. +++|+|.+++.+... ...
T Consensus 16 ~~~c~C~~g~~G~~C~~~C~~~-----------~~c~~~g------~C~~-~g~C~C~~G~~G~~C-~~~---------- 66 (169)
T 2vj2_A 16 RSAVTCDDYYYGFGCNKFCRPR-----------DDFFGHY------ACDQ-NGNKTCMEGWMGPEC-NRA---------- 66 (169)
T ss_dssp -----CCTTEETTTTCEECCCE-----------EETTEEE------EECS-SCCEEECTTEESTTS-CEE----------
T ss_pred CeeeeCCCcCcCCCcccccCCC-----------CCcCCCC------EeCC-CCeeECCCCCcCCCC-CCC----------
Confidence 68899999999999974 3320 1233333 2654 788999887543221 100
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCccCCCCccccCCCCcccCCCCCCCCCcccCCCCCCccCCCCCCCCCCCCCCCCCC
Q psy15472 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230 (247)
Q Consensus 151 ~~~~~~~~~~C~~~~~~~~~~~~~~~~C~~~G~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~C~C~~~g~~~~~~~C~~~ 230 (247)
.|.... ......|...++|.|++||+|..|++|... + .|.+ +.|. .
T Consensus 67 ---------~C~~~C------~~~~g~C~~~~~C~C~~G~~G~~C~~C~~~----------~-~C~~-------g~C~-~ 112 (169)
T 2vj2_A 67 ---------ICRQGC------SPKHGSCKLPGDCRCQYGWQGLYCDKCIPH----------P-GCVH-------GICN-E 112 (169)
T ss_dssp ---------CCCTTC------CTTTEECSSTTCCEECTTEESSSSCEECCC----------T-TCSS-------EECS-S
T ss_pred ---------CCCCCC------CCCCcccCCCCeeECCCCCCCCCcccCCCC----------C-CCCC-------CCcC-C
Confidence 111100 001223555689999999999999886531 0 1332 1355 4
Q ss_pred CCeeeCCCCCCCCCCC
Q psy15472 231 KGQCECKDNVEGAQCR 246 (247)
Q Consensus 231 tG~C~C~~g~~G~~C~ 246 (247)
+++|+|++||+|..|+
T Consensus 113 ~~~C~C~~G~~G~~C~ 128 (169)
T 2vj2_A 113 PWQCLCETNWGGQLCD 128 (169)
T ss_dssp TTCCEECTTEETTTTC
T ss_pred CCEEeCCCCCCCCccc
Confidence 6899999999999996
No 20
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.63 E-value=2.2e-08 Score=76.04 Aligned_cols=50 Identities=34% Similarity=0.851 Sum_probs=35.6
Q ss_pred cccCCCCcccCCCCCCCCCcccCCCCCCccCCCCCCCCCCCCCCCCCCCC--eeeCCCCCCCCCCC
Q psy15472 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQCR 246 (247)
Q Consensus 183 ~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~~C~ 246 (247)
+|.|++||+|..|+. ..+.|..-+|.+++ .|....| +|.|++||+|..|+
T Consensus 67 ~C~C~~G~~G~~C~~--------~~~~C~~~~C~~~g------~C~~~~g~~~C~C~~G~~G~~C~ 118 (135)
T 2vj3_A 67 QCICMPGYEGVHCEV--------NTDECASSPCLHNG------RCLDKINEFQCECPTGFTGHLCQ 118 (135)
T ss_dssp EEECCTTEESSSSCE--------ECCTTTTCCSTTTC------EEEECSSCEEEECCTTEESSSSC
T ss_pred eeeCCCCCcCCccee--------cCCcccCCCcCCCC------EeECCCCCeEEECCCCCcCCccC
Confidence 899999999999863 12234444565543 4654444 89999999999996
No 21
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.58 E-value=6.2e-08 Score=73.95 Aligned_cols=50 Identities=26% Similarity=0.763 Sum_probs=36.2
Q ss_pred cccCCCCcccCCCCCCCCCcccCCCCCCccCCCCCCCCCCCCCCCCCCCC--eeeCCCCCCCCCCC
Q psy15472 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQCR 246 (247)
Q Consensus 183 ~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~~C~ 246 (247)
+|.|++||+|.+|+. ..+.|..-+|.++ +.|....| +|+|++||+|++|+
T Consensus 81 ~C~C~~G~~G~~C~~--------~i~~C~~~~C~~~------~~C~~~~g~~~C~C~~G~~G~~c~ 132 (143)
T 4d90_A 81 VCKCPRGFNGIHCQH--------NINECEVEPCKNG------GICTDLVANYSCECPGEFMGRNCQ 132 (143)
T ss_dssp EEECCTTEESTTSCE--------ECCTTTTCCSCTT------CEEEEETTEEEEECCTTCBSTTSC
T ss_pred EeECcCCCcCCCccc--------CCCcCCCCCCCCC------CEeECCCCCeEeECCCCCccCCce
Confidence 899999999999962 1233444446554 34665455 89999999999986
No 22
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.46 E-value=2.9e-08 Score=93.92 Aligned_cols=151 Identities=24% Similarity=0.565 Sum_probs=80.2
Q ss_pred CCCCCCCCCCcCCCC-----CceeeCCCCCcCCCCCCCCCCcccCCC--CCccccc----CCCCCCCCCCCCCcCCCCce
Q psy15472 57 CNCNPIGSLNLQCNS-----EGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCE----CNPAGSVKNTPNCDSVKGQC 125 (247)
Q Consensus 57 C~C~~~g~~~~~c~~-----~g~C~C~~g~~G~~C~~C~~G~~g~~~--~~C~~C~----C~~~g~~~~~~~C~~~tG~C 125 (247)
|.|.........|.. .|+|.|++||+|.+|+ |..++++... ..|.+.. |.++|+ |. .|+|
T Consensus 425 C~C~~~~~~s~~Cs~~G~C~~g~C~C~~Gy~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Cs~~G~------C~--~G~C 495 (687)
T 3k6s_B 425 CRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLGD------CV--CGQC 495 (687)
T ss_dssp CCCCCSSSCSSTGGGSEEESSSSEEECSSEESTTSC-EESSSCCCSGGGSTTSSSTTSCGGGSSEE------EE--TTEE
T ss_pred ccCccCCCCCCCCCCCCEEeCCEeEcCCCCcCCccc-ccCCcCCccccCCCCCCCCCCCcCCCCCE------Ee--CCEE
Confidence 556543323334442 5789999999999998 7777665431 1254322 454442 65 5788
Q ss_pred eccCCCCCCccceeeeeccccCcCCCCCccccCCCCCCCCCCCCCCCCCCccCCC--CccccCCCCcccCCCCCCCCCcc
Q psy15472 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS--EGRCQCKPGVTGDKCDRCDVNHY 203 (247)
Q Consensus 126 ~c~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~C~~--~G~C~C~~g~~G~~C~~C~~g~~ 203 (247)
+|..... ...+|.+..|+.+..... ......|.. .|.|.+. .| .|.+||.
T Consensus 496 ~C~~~~~-------------------~~~G~~G~~Ce~~~~~C~--~~~~~~C~~~~~G~C~~g------~C-~C~~G~~ 547 (687)
T 3k6s_B 496 LCHTSDV-------------------PGKLIYGQYCECDTINCE--RYNGQVCGGPGRGLCFCG------KC-RCHPGFE 547 (687)
T ss_dssp EECCCCS-------------------TTCCEESTTSCEESSCSC--EETTEETSHHHHEEEETT------EE-EECTTCC
T ss_pred EcCCCCC-------------------CCCCcccccccccccccc--CCCCcCcCCCCCCeEECC------EE-EcCCCCc
Confidence 8872100 001244444442111000 001123554 5777752 34 4677777
Q ss_pred cCCCCCCc----cCCCCCCCCCCCCCCCCCCCCeeeCCCCCCCCCCCC
Q psy15472 204 DFGEAGCK----SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247 (247)
Q Consensus 204 g~~~~~C~----~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~ 247 (247)
|.... |. .|.-.......+.+.|+ .|+|.|++||+|+.|+.
T Consensus 548 G~~Ce-c~~~~~~C~~~~g~~Cs~~G~C~--~g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 548 GSACQ-CERTTEGCLNPRRVECSGRGRCR--CNVCECHSGYQLPLCQE 592 (687)
T ss_dssp STTSC-SCCSSCTTBCTTCSBTSSSCCBC--SSCBCCSTTCCTTTTCC
T ss_pred CCCCc-cCCCCCCCCCCCCCCCCCCCcCC--CCEEECCCCCcCCCCCC
Confidence 66522 11 22211112222445664 68999999999999974
No 23
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.32 E-value=9.9e-07 Score=67.15 Aligned_cols=64 Identities=22% Similarity=0.536 Sum_probs=41.7
Q ss_pred CeeccCCCCCCCCCCCCCC---CCCCccCCCCCCCcCCCCCCCCCCCcCC----C--CCceeeCCCCCcCCCCC
Q psy15472 23 GGHCLDCQGDRDGPNCEKC---RDNYYQKSGDNFCTACNCNPIGSLNLQC----N--SEGRCQCKPGVTGDKCD 87 (247)
Q Consensus 23 ~g~C~~C~~~~~G~~Ce~C---~~Gy~g~~~~~~C~~C~C~~~g~~~~~c----~--~~g~C~C~~g~~G~~C~ 87 (247)
+.+| .|+++|+|.+|+.- ..........+.|.+-+|.+.+.....- + ..++|+|++||+|.+|+
T Consensus 22 ~~~C-~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~ 94 (143)
T 4d90_A 22 SFSC-ECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQ 94 (143)
T ss_dssp CCEE-ECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSC
T ss_pred CEEe-ECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcc
Confidence 5689 59999999999852 2222222245567666676655322100 1 26799999999999996
No 24
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.23 E-value=9.3e-07 Score=66.89 Aligned_cols=51 Identities=33% Similarity=0.769 Sum_probs=32.7
Q ss_pred CeeccCCCCCCCCCCCCCCCCCCccCCCCCCCcCCCCCCCCCCCcCCC---CCceeeCCCCCcCCCCC
Q psy15472 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---SEGRCQCKPGVTGDKCD 87 (247)
Q Consensus 23 ~g~C~~C~~~~~G~~Ce~C~~Gy~g~~~~~~C~~C~C~~~g~~~~~c~---~~g~C~C~~g~~G~~C~ 87 (247)
+.+| .|+++|+|.+|+. ..+.|..-+|.+.+ .|. ..++|.|++||+|..|+
T Consensus 27 ~~~C-~C~~Gy~G~~C~~---------~~~~C~~~~C~~~~----~C~~~~g~~~C~C~~G~~G~~C~ 80 (135)
T 2vj3_A 27 SFEC-QCLQGYTGPRCEI---------DVNECVSNPCQNDA----TCLDQIGEFQCICMPGYEGVHCE 80 (135)
T ss_dssp SEEE-ECCTTEESTTSCE---------ECCTTTTCCCCSSC----EEEECSSCEEEECCTTEESSSSC
T ss_pred CEEE-ECCCCCcCCcccc---------cCccCCCCCCCCCC----EEeCCCCCceeeCCCCCcCCcce
Confidence 4566 4777776666642 13455555565444 333 26799999999999886
No 25
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.09 E-value=9.2e-07 Score=72.37 Aligned_cols=50 Identities=30% Similarity=0.846 Sum_probs=33.2
Q ss_pred ccccCCCC------cccCCCCC----CCCCcccCCCCCCccCCCCCCCCCCCCCCCCCCCCeeeCCCCCCCCCCC
Q psy15472 182 GRCQCKPG------VTGDKCDR----CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246 (247)
Q Consensus 182 G~C~C~~g------~~G~~C~~----C~~g~~g~~~~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~ 246 (247)
|+|.|.+| |+|..|+. |+.. .+ -.|.+++ .+.|+ .|+|.|.+||+|..|+
T Consensus 154 g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~-~g--------~~C~~~~----~G~C~--~g~C~C~~G~~G~~C~ 213 (217)
T 2p28_B 154 GQCLCHTSDVPGKLIYGQYCECDTINCERY-NG--------QVCGGPG----RGLCF--CGKCRCHPGFEGSACQ 213 (217)
T ss_dssp TEEEECCCCSTTCCEESTTSCEESSCSCEE-TT--------EETTCTT----TEEEE--TTEEEECTTEESTTSC
T ss_pred CceECCCCCCCcccEECCCcccCCccCCCC-CC--------CCCCCCC----CcEEe--CCeeECCCCCccCCcC
Confidence 48999999 69999862 3311 00 1244430 13465 4899999999999997
No 26
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=97.79 E-value=4.9e-06 Score=71.98 Aligned_cols=41 Identities=34% Similarity=0.957 Sum_probs=36.0
Q ss_pred CCCCCCCCCcccchhhhcccCCCeeccCCCCCCCCCCCCCCCCCCccCC
Q psy15472 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS 49 (247)
Q Consensus 1 c~C~~h~~~C~~~~~~~~~~~~~g~C~~C~~~~~G~~Ce~C~~Gy~g~~ 49 (247)
|+||||+.+|.++. +.++| .|+|||+|++||+|+++|++.+
T Consensus 270 C~CnGHA~~C~~~~-------g~~~C-~C~HnT~G~~Ce~C~p~y~~~p 310 (338)
T 3tbd_A 270 CKCNLHANLCSMRE-------GSLQC-ECEHNTTGPDCGKCKKNFRTRS 310 (338)
T ss_dssp ECCTTBCSCEEEET-------TEEEE-CCCTTEESTTSCEECTTCBSSC
T ss_pred ccccCCcCccCCCC-------CCcee-cCCCCCCCCCCcccCccccCCC
Confidence 68999999998753 25789 7999999999999999999875
No 27
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=97.75 E-value=2.5e-08 Score=83.71 Aligned_cols=61 Identities=8% Similarity=-0.049 Sum_probs=38.4
Q ss_pred CeeccCCCCCCCCCCCCC---------------CCCCCc---cCC--CCCCCcCCCCCCCCCCCcCCCC---CceeeCCC
Q psy15472 23 GGHCLDCQGDRDGPNCEK---------------CRDNYY---QKS--GDNFCTACNCNPIGSLNLQCNS---EGRCQCKP 79 (247)
Q Consensus 23 ~g~C~~C~~~~~G~~Ce~---------------C~~Gy~---g~~--~~~~C~~C~C~~~g~~~~~c~~---~g~C~C~~ 79 (247)
+.+| .|+.+|+|.+||. |.+|.. |.. ...+|..-+|.+.+ +|.. +++|.|++
T Consensus 52 ~y~C-~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG----~C~~~~~sy~C~C~~ 126 (267)
T 4fbr_A 52 TYNG-EGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGG----KTLTGTTTYNGEGPI 126 (267)
T ss_dssp EETT-SCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTT----SEEEEEEEETTSCCE
T ss_pred CeEE-eCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCC----EEecCCccEEeeCCC
Confidence 5667 6999999999974 333322 222 12234444444443 3332 68899999
Q ss_pred CCcCCCCCC
Q psy15472 80 GVTGDKCDR 88 (247)
Q Consensus 80 g~~G~~C~~ 88 (247)
||+|.+|+.
T Consensus 127 Gf~G~~Ce~ 135 (267)
T 4fbr_A 127 GFKSEVTDG 135 (267)
T ss_dssp EEEEEECCC
T ss_pred CccccCCCC
Confidence 999999974
No 28
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.59 E-value=7.2e-06 Score=67.06 Aligned_cols=58 Identities=29% Similarity=0.802 Sum_probs=35.2
Q ss_pred CeeccCCCCCCCCCCCCCCCCCCccCCC-CCCCc----CCCCCCCCCCCcCCCCCceeeCCCC------CcCCCCC
Q psy15472 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCT----ACNCNPIGSLNLQCNSEGRCQCKPG------VTGDKCD 87 (247)
Q Consensus 23 ~g~C~~C~~~~~G~~Ce~C~~Gy~g~~~-~~~C~----~C~C~~~g~~~~~c~~~g~C~C~~g------~~G~~C~ 87 (247)
.|+| .|.++|+|.+|| |+.+.+.... ...|. ..+|.++| .|. .++|.|.++ |+|.+|+
T Consensus 106 ~g~C-~C~~G~~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Csg~G----~C~-~g~C~C~~gw~~~~~~~G~~Ce 174 (217)
T 2p28_B 106 CGIC-RCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLG----DCV-CGQCLCHTSDVPGKLIYGQYCE 174 (217)
T ss_dssp TTEE-EECTTEESTTSC-EECCCCC-GGGGGGGBSSTTSCBGGGTE----EEE-TTEEEECCCCSTTCCEESTTSC
T ss_pred CCEE-ECCCCccCCccc-ccCcccccccCCCcCCCCCCCCCCCCCC----EEe-CCceECCCCCCCcccEECCCcc
Confidence 4678 599999999998 6655432210 11233 22344433 343 478999999 4777775
No 29
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=97.58 E-value=5e-07 Score=72.08 Aligned_cols=50 Identities=26% Similarity=0.706 Sum_probs=32.2
Q ss_pred cccCCCCccc-----CCCCCCCCCcccCCCCCCccCCC-CCCCCCCCCCCCCCCCC--eeeCCCCCCCCCCC
Q psy15472 183 RCQCKPGVTG-----DKCDRCDVNHYDFGEAGCKSCEC-NPAGSVKNTPNCDSVKG--QCECKDNVEGAQCR 246 (247)
Q Consensus 183 ~C~C~~g~~G-----~~C~~C~~g~~g~~~~~C~~C~C-~~~g~~~~~~~C~~~tG--~C~C~~g~~G~~C~ 246 (247)
+|.|++||+| ..|+. ...+.|.. +| .+. +.|....| +|.|++||+|..++
T Consensus 117 ~C~C~~Gy~g~~~~~~~C~~-------~~~~~C~~-~C~~~~------~~C~n~~g~y~C~C~~G~~g~~~~ 174 (186)
T 1z1y_A 117 GCSCAIGXVPNPEDEXXCTX-------TGETACQL-XCNTDN------EVCXNVEGVYXCQCMEGFTFDXEX 174 (186)
T ss_dssp EEEECTEEEEETTTTTEEEE-------EECCCCCC-CCCTTT------EEEEEETTEEEEEECTTCEEETTT
T ss_pred eEECCCCCcccCCCCCcceE-------cCCCcccc-cccccC------cceecCCCCeeeECCCCCccCccc
Confidence 8999999998 55532 00123332 45 332 34665555 79999999998875
No 30
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.42 E-value=7.9e-05 Score=56.56 Aligned_cols=58 Identities=21% Similarity=0.472 Sum_probs=34.5
Q ss_pred cccCCCCcccCCCCCCCCCcccC---CCCCCcc--CCCCCCCCCCCCCCCCCCCC--eeeCCCCCCCCCCC
Q psy15472 183 RCQCKPGVTGDKCDRCDVNHYDF---GEAGCKS--CECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQCR 246 (247)
Q Consensus 183 ~C~C~~g~~G~~C~~C~~g~~g~---~~~~C~~--C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~~C~ 246 (247)
+|.|++||+|..++.=.....+. ..+.|.. -+|.+. +.|....| +|+|++||+|....
T Consensus 69 ~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~------~~C~n~~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 69 DCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSS------TVCFNTVGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp EEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTT------SEEEECSSCEEEECCSSSCBCTTC
T ss_pred EeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCC------CEEECCCCCEEeeCCCCcccCCCC
Confidence 89999999998765310000011 1233432 345443 34665555 79999999998753
No 31
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.30 E-value=0.00011 Score=51.45 Aligned_cols=51 Identities=24% Similarity=0.708 Sum_probs=32.5
Q ss_pred CccccCCCCcccCCCCCCCCCcccCCCCCCccCCCCCCCCCCCCCCCCCC----CCeeeCCCCCCCCCCC
Q psy15472 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV----KGQCECKDNVEGAQCR 246 (247)
Q Consensus 181 ~G~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~C~C~~~g~~~~~~~C~~~----tG~C~C~~g~~G~~C~ 246 (247)
..+|.|++||+ .|+. ...+.|.+-+|.++| +|... ..+|.|++||+|++|+
T Consensus 31 ~y~C~C~~G~~--~C~~-------~~~~~C~~~pC~ngg------~C~~~~~~~~~~C~C~~G~~G~~Ce 85 (91)
T 1tpg_A 31 VEYCWCNSGRA--QCHS-------VPVKSCSEPRCFNGG------TCQQALYFSDFVCQCPEGFAGKSCE 85 (91)
T ss_dssp EEEEECSSSCC--BCCE-------ECEEECSSCCSCTTC------EEEEESSSSCEEEECCTTCBSSSCC
T ss_pred CcEeECCCCCc--cccc-------CcCCcccCCCCCCCC------EeecCCCCCCeEeECCCCCcCCcCC
Confidence 34678888886 5531 012345455577654 36543 3389999999999997
No 32
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.26 E-value=0.00026 Score=49.56 Aligned_cols=37 Identities=27% Similarity=0.547 Sum_probs=24.1
Q ss_pred CCCcCCCCCCCCCCCcCC-CCCceeeCCCCCcCCCCCC
Q psy15472 52 NFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 52 ~~C~~C~C~~~g~~~~~c-~~~g~C~C~~g~~G~~C~~ 88 (247)
+.|.+-+|.+.++....- ...+.|.|++||+|.+|+.
T Consensus 49 ~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 49 KSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEI 86 (91)
T ss_dssp EECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCB
T ss_pred CcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCc
Confidence 456655676655332111 1367899999999999974
No 33
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=97.09 E-value=2.4e-06 Score=71.66 Aligned_cols=17 Identities=12% Similarity=0.036 Sum_probs=15.5
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
++.|.|++||+|.+|+.
T Consensus 52 ~y~C~Cp~Gf~G~~Ce~ 68 (267)
T 4fbr_A 52 TYNGEGPIGFRGTLSSA 68 (267)
T ss_dssp EETTSCCEEEEEEECST
T ss_pred CeEEeCCCCcccccccc
Confidence 68899999999999975
No 34
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=96.94 E-value=0.00037 Score=65.36 Aligned_cols=52 Identities=29% Similarity=0.744 Sum_probs=32.3
Q ss_pred ccc-CCCCcccCCCC------------CCCCCcccCCCCCCcc--CCCCCCCCCCCCCCCCCCC------CeeeCCCCCC
Q psy15472 183 RCQ-CKPGVTGDKCD------------RCDVNHYDFGEAGCKS--CECNPAGSVKNTPNCDSVK------GQCECKDNVE 241 (247)
Q Consensus 183 ~C~-C~~g~~G~~C~------------~C~~g~~g~~~~~C~~--C~C~~~g~~~~~~~C~~~t------G~C~C~~g~~ 241 (247)
+|. |++||+|..|+ .|. ....|.. -+|.+. +.|.... .+|.|++||.
T Consensus 71 ~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~------dideC~~~~~pC~~~------~~Cvnt~~~~~GsY~C~C~~Gy~ 138 (634)
T 1yo8_A 71 HCLPCPPRYRGNQPVGVGLEAAKTEKQVCE------PENPCKDKTHNCHKH------AECIYLGHFSDPMYKCECQTGYA 138 (634)
T ss_dssp EECCCCTTEEECCCEESSSHHHHSCCCCEE------ECCTTTTTCCCCCTT------EEEEECCTTCSSSEEEEECTTEE
T ss_pred ecccCCCCcccCccccccccccccCCCccc------ccccccCCCcccccC------ccccccccccccceeeeccCCcc
Confidence 898 99999998875 122 1233432 234443 3354333 3899999999
Q ss_pred C--CCCC
Q psy15472 242 G--AQCR 246 (247)
Q Consensus 242 G--~~C~ 246 (247)
| ..|+
T Consensus 139 GdG~~Ce 145 (634)
T 1yo8_A 139 GDGLICG 145 (634)
T ss_dssp ESSSSEE
T ss_pred ccCcccc
Confidence 8 6663
No 35
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.88 E-value=0.00012 Score=66.46 Aligned_cols=20 Identities=45% Similarity=1.187 Sum_probs=17.3
Q ss_pred CCCCCceeeCCCCCcCCCCC
Q psy15472 68 QCNSEGRCQCKPGVTGDKCD 87 (247)
Q Consensus 68 ~c~~~g~C~C~~g~~G~~C~ 87 (247)
.|...++|.|++||+|..|+
T Consensus 403 ~C~~~~~C~C~~G~~G~~C~ 422 (463)
T 2wg3_C 403 YCTPTGKCCCSPGWEGDFCR 422 (463)
T ss_dssp EECTTSCEEECTTEESTTSC
T ss_pred ccCCCCeECCCCCcCCCcCC
Confidence 57667899999999999996
No 36
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.71 E-value=0.00032 Score=63.68 Aligned_cols=54 Identities=37% Similarity=0.916 Sum_probs=19.0
Q ss_pred ccCCCCccccCCCCcccCCCCCCCCCcccCCCCCCccCCCCCCCCCCCCCCCCCCCCeeeCCCCCCCCCCCC
Q psy15472 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247 (247)
Q Consensus 176 ~~C~~~G~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~ 247 (247)
..|...++|.|++||+|..|+. ..|.+ +|.++| .|.. .++|.|++||+|..|+.
T Consensus 402 G~C~~~~~C~C~~G~~G~~C~~----------~~C~~-~C~~~g------~C~~-~~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 402 GYCTPTGKCCCSPGWEGDFCRT----------AKCEP-ACRHGG------VCVR-PNKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp EEECTTSCEEECTTEESTTSCE----------ECC-------------------------------------
T ss_pred CccCCCCeECCCCCcCCCcCCc----------CcCCC-CCCCCC------EECC-CCEEECCCCcccCCCCC
Confidence 3566678999999999999963 13444 577654 4664 37999999999999974
No 37
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=96.29 E-value=0.0016 Score=41.02 Aligned_cols=35 Identities=23% Similarity=0.547 Sum_probs=25.3
Q ss_pred CCCCccCCCCCCCCCCCCCCCC------CCC-CeeeCCCCCCCCCCCC
Q psy15472 207 EAGCKSCECNPAGSVKNTPNCD------SVK-GQCECKDNVEGAQCRS 247 (247)
Q Consensus 207 ~~~C~~C~C~~~g~~~~~~~C~------~~t-G~C~C~~g~~G~~C~~ 247 (247)
.+.|.+-+|.++|+ |. ... .+|.|++||+|++||+
T Consensus 8 ~~eC~s~pC~NgGt------C~~~~~~d~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 8 CAEKEKTFCVNGGE------CFMVKDLSNPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp CCSTTTTTSCTTCE------EEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred CCCCcCCCCCCCCC------cCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence 44566777888655 62 222 3899999999999984
No 38
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=96.00 E-value=0.0001 Score=58.54 Aligned_cols=46 Identities=26% Similarity=0.544 Sum_probs=30.0
Q ss_pred cccCCCCcccCCCCCCCCCcccCCCCCCccCCCCCCCCCCCCCCCC----CCCC--eeeCCCCCCC
Q psy15472 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD----SVKG--QCECKDNVEG 242 (247)
Q Consensus 183 ~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~C~C~~~g~~~~~~~C~----~~tG--~C~C~~g~~G 242 (247)
+|.|++||+|..+ +|. .+.|..-+|.+++ .|. ...| +|+|++||+|
T Consensus 75 ~C~C~~G~~g~~~-~C~-------~d~C~~~~C~~~g------~C~~~~~~~~g~~~C~C~~Gy~g 126 (186)
T 1z1y_A 75 XCGCIEGYTLXED-TCV-------LDVCQYXNCGESG------ECIVEYLSEIQSAGCSCAIGXVP 126 (186)
T ss_dssp EEEECTTEEEETT-EEE-------EGGGTTCCCCTTE------EEEEEEETTEEEEEEEECTEEEE
T ss_pred ECCCCCCCccCCC-CCC-------CCcCcCCCCCCCC------EEeeCCcCCCCCceEECCCCCcc
Confidence 8999999999865 222 1233333465543 464 3333 8999999998
No 39
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=95.72 E-value=0.0035 Score=47.26 Aligned_cols=17 Identities=24% Similarity=0.520 Sum_probs=14.4
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
+++|.|++||+|..++.
T Consensus 67 ~y~C~C~~Gy~g~~~~~ 83 (143)
T 2bou_A 67 SYDCVCSPGYEPVSGAK 83 (143)
T ss_dssp CEEEEECTTEEETTCCS
T ss_pred CeEeECCCCcccCcCcc
Confidence 68999999999987753
No 40
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=95.55 E-value=0.0065 Score=35.04 Aligned_cols=33 Identities=33% Similarity=0.732 Sum_probs=23.4
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCC--eeeCCCCCCCCCCCC
Q psy15472 209 GCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQCRS 247 (247)
Q Consensus 209 ~C~~C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~~C~~ 247 (247)
.|.+-+|.++++ |....+ +|.|++||+|.+|+.
T Consensus 5 ~C~~~pC~ngg~------C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 5 QCESNPCLNGGS------CKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp TTTTCCCCTTCE------EEEETTEEEEECCTTCCSTTSCC
T ss_pred cCCCCCCCCCCE------eEcCCCceEeECCCCCcCCccCC
Confidence 455556776543 554333 899999999999973
No 41
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=95.48 E-value=0.0098 Score=34.25 Aligned_cols=35 Identities=26% Similarity=0.542 Sum_probs=23.4
Q ss_pred CCCcCCCCCCCCCCCcCCCCCceeeCCCCCcCCCCC
Q psy15472 52 NFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87 (247)
Q Consensus 52 ~~C~~C~C~~~g~~~~~c~~~g~C~C~~g~~G~~C~ 87 (247)
+.|.+-+|.+.++.... ...+.|.|++||+|.+|+
T Consensus 4 d~C~~~pC~ngg~C~~~-~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 4 DQCESNPCLNGGSCKDD-INSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CTTTTCCCCTTCEEEEE-TTEEEEECCTTCCSTTSC
T ss_pred ccCCCCCCCCCCEeEcC-CCceEeECCCCCcCCccC
Confidence 45666667665532111 126789999999999987
No 42
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=95.45 E-value=0.0035 Score=47.40 Aligned_cols=35 Identities=26% Similarity=0.761 Sum_probs=25.4
Q ss_pred CCCCCcCCCCCCCCCCCcCCCC---CceeeCCCCCcCCCCCC
Q psy15472 50 GDNFCTACNCNPIGSLNLQCNS---EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 50 ~~~~C~~C~C~~~g~~~~~c~~---~g~C~C~~g~~G~~C~~ 88 (247)
..+.|.+-+|.+.+ .|.. ++.|.|++||+|..|+.
T Consensus 46 did~C~~~pC~n~g----~C~~~~g~y~C~C~~G~~G~~C~~ 83 (142)
T 2c4f_L 46 DGDQCASSPCQNGG----SCKDQLQSYICFCLPAFEGRNCET 83 (142)
T ss_dssp TCCGGGGCCCCTTC----EEEEETTEEEEECCTTEESTTSCE
T ss_pred ccCcCcCCCcCCCC----EEeCCCCCEEeeCCCCccCCcccc
Confidence 35667776776654 3432 67999999999999873
No 43
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=95.19 E-value=0.01 Score=37.26 Aligned_cols=38 Identities=24% Similarity=0.356 Sum_probs=26.9
Q ss_pred CCCCcCCCCCCCCCCCcC--CC--CCceeeCCCCCcCCCCCC
Q psy15472 51 DNFCTACNCNPIGSLNLQ--CN--SEGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 51 ~~~C~~C~C~~~g~~~~~--c~--~~g~C~C~~g~~G~~C~~ 88 (247)
.++|..-+|.+.|+.... -+ ..+.|.|++||+|.+||.
T Consensus 8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 8 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence 356777778777754211 01 278999999999999985
No 44
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=95.18 E-value=0.012 Score=44.73 Aligned_cols=38 Identities=21% Similarity=0.473 Sum_probs=23.9
Q ss_pred CCCCCcCCCCCCCCCCCcCCCCCceeeCCCCCcCCCCCC
Q psy15472 50 GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 50 ~~~~C~~C~C~~~g~~~~~c~~~g~C~C~~g~~G~~C~~ 88 (247)
..+.|.+-+|.+.++.... ..++.|.|++||+|..|+.
T Consensus 47 dideC~~~pC~n~g~C~~~-~~~y~C~C~~G~~G~~C~~ 84 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDD-INSYECWCQVGFEGKNCEL 84 (146)
T ss_dssp ---CCSSCSSCTTCEEEEC-SSCEEEECCSSEESTTTCE
T ss_pred CcCcCCCCCCCCCCEeECC-CCCEEEecCCCCcCCcCCC
Confidence 3566777677665432111 1268999999999999863
No 45
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=94.73 E-value=0.02 Score=34.14 Aligned_cols=17 Identities=35% Similarity=0.952 Sum_probs=15.3
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
.+.|.|++||+|.+|+.
T Consensus 25 ~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 25 SYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp SEEEECCTTEETTTTCE
T ss_pred CEEEEcCCCCcCCcCCc
Confidence 68999999999999973
No 46
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=94.71 E-value=0.0072 Score=56.65 Aligned_cols=16 Identities=25% Similarity=0.521 Sum_probs=13.7
Q ss_pred Cceee-CCCCCcCCCCC
Q psy15472 72 EGRCQ-CKPGVTGDKCD 87 (247)
Q Consensus 72 ~g~C~-C~~g~~G~~C~ 87 (247)
+++|. |++||+|..|+
T Consensus 69 sY~C~~C~~Gy~G~~c~ 85 (634)
T 1yo8_A 69 GFHCLPCPPRYRGNQPV 85 (634)
T ss_dssp SEEECCCCTTEEECCCE
T ss_pred ceecccCCCCcccCccc
Confidence 68898 99999998875
No 47
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=94.64 E-value=0.017 Score=34.53 Aligned_cols=15 Identities=27% Similarity=0.771 Sum_probs=13.8
Q ss_pred CeeeCCCCCCCCCCC
Q psy15472 232 GQCECKDNVEGAQCR 246 (247)
Q Consensus 232 G~C~C~~g~~G~~C~ 246 (247)
..|.|++||+|.+|+
T Consensus 26 ~~C~C~~G~~G~~Ce 40 (45)
T 1a3p_A 26 YTCNCVIGYSGDRCQ 40 (45)
T ss_dssp EEEECCTTEETTTTC
T ss_pred EEEEcCCCCcCCcCC
Confidence 489999999999996
No 48
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=94.61 E-value=0.0029 Score=39.26 Aligned_cols=14 Identities=36% Similarity=0.973 Sum_probs=13.4
Q ss_pred eeeCCCCCCCCCCC
Q psy15472 233 QCECKDNVEGAQCR 246 (247)
Q Consensus 233 ~C~C~~g~~G~~C~ 246 (247)
.|+|++||+|.+|+
T Consensus 34 ~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 34 SCECAIGFMGQRCE 47 (52)
T ss_dssp EEECCTTEESTTSC
T ss_pred EEECCCCCcCCCCc
Confidence 89999999999997
No 49
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=94.58 E-value=0.044 Score=33.87 Aligned_cols=23 Identities=30% Similarity=0.819 Sum_probs=18.9
Q ss_pred CceeeCCCCCcCCCCCCCCCCcc
Q psy15472 72 EGRCQCKPGVTGDKCDRCDVNHY 94 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~C~~G~~ 94 (247)
.+.|.|++||+|.+|+.=...||
T Consensus 28 ~~~C~C~~G~~G~~Ce~~~~~~~ 50 (53)
T 1egf_A 28 SYTCNCVIGYSGDRCQTRDLRWW 50 (53)
T ss_dssp CEEEECCTTCCSSSSCCCSCCCC
T ss_pred CEEEECCCCCcCCcCCccCcccc
Confidence 78999999999999987555554
No 50
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=94.46 E-value=0.0058 Score=46.15 Aligned_cols=53 Identities=25% Similarity=0.725 Sum_probs=33.9
Q ss_pred cccCCCCcccCCCCCCCCCcccCCCCCCccCCCCCCCCCCCCCCCCCCCC---eeeCCCCCC----CCCCC
Q psy15472 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG---QCECKDNVE----GAQCR 246 (247)
Q Consensus 183 ~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~C~C~~~g~~~~~~~C~~~tG---~C~C~~g~~----G~~C~ 246 (247)
.|.|++||+|..|+. . ...|.+|.+.+++- ...|....| +|.|++||+ |.+|+
T Consensus 69 ~C~C~~G~~G~~C~~------~--~~~c~~c~~~~~~C---~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~ 128 (142)
T 2c4f_L 69 ICFCLPAFEGRNCET------H--KDDQLICVNENGGC---EQYCSDHTGTKRSCRCHEGYSLLADGVSCT 128 (142)
T ss_dssp EEECCTTEESTTSCE------E--GGGCCSTTTGGGGC---SSEEECCTTSCCEEECCTTEEECTTSSCEE
T ss_pred EeeCCCCccCCcccc------C--ccccccccCCCCCc---cCEeECCCCCCEEEECCCCceECCCCCCCC
Confidence 899999999999864 0 11233344443321 013544433 899999999 88874
No 51
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=94.32 E-value=0.029 Score=34.71 Aligned_cols=16 Identities=25% Similarity=0.754 Sum_probs=14.1
Q ss_pred CeeeCCCCCCCCCCCC
Q psy15472 232 GQCECKDNVEGAQCRS 247 (247)
Q Consensus 232 G~C~C~~g~~G~~C~~ 247 (247)
..|.|++||+|.+|+.
T Consensus 29 ~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 29 YTCNCVIGYSGDRCQT 44 (53)
T ss_dssp EEEECCTTCCSSSSCC
T ss_pred EEEECCCCCcCCcCCc
Confidence 3899999999999973
No 52
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=93.91 E-value=0.0061 Score=44.50 Aligned_cols=44 Identities=27% Similarity=0.699 Sum_probs=27.5
Q ss_pred cccCCCCcc---cCCCCCCCCCcccCCCCCCcc-CCCCCCCCCCCCCCCCCCCC--eeeCCCCCCCC
Q psy15472 183 RCQCKPGVT---GDKCDRCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKG--QCECKDNVEGA 243 (247)
Q Consensus 183 ~C~C~~g~~---G~~C~~C~~g~~g~~~~~C~~-C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~ 243 (247)
.|.|++||+ |..|+. .+.|.. -+| . +.|....| +|+|++||+|.
T Consensus 62 ~C~C~~Gy~~~~g~~C~d---------ideC~~~~~C--~------~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 62 SCECPEGYILDDGFICTD---------IDECENGGFC--S------GVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp CEECCTTEEEETTTEEEE---------CCHHHHCSSC--S------SEEEECSSSEEEEECSSSSCE
T ss_pred EeECCCCccCCCCCcccc---------ccccCCCCCC--c------CeEEeCCCCEEEECCCCCccC
Confidence 899999999 776631 223332 223 1 23544434 89999999874
No 53
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=93.69 E-value=0.0078 Score=48.10 Aligned_cols=41 Identities=27% Similarity=0.810 Sum_probs=0.0
Q ss_pred CCccCC-CCCCCcCCCCCCCCCCCcCCCC---CceeeCCCCCcCCCCCC
Q psy15472 44 NYYQKS-GDNFCTACNCNPIGSLNLQCNS---EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 44 Gy~g~~-~~~~C~~C~C~~~g~~~~~c~~---~g~C~C~~g~~G~~C~~ 88 (247)
+||+.- ..+.|..-+|.+.+ .|.. ++.|.|++||+|..|+.
T Consensus 34 ~fw~~c~dideC~~~pC~ngg----~C~n~~g~y~C~C~~Gf~G~~Ce~ 78 (195)
T 1nfu_B 34 EFWNKYKDGDQCETSPCQNQG----KCKDGLGEYTCTCLEGFEGKNCEL 78 (195)
T ss_dssp -------------------------------------------------
T ss_pred cccccCCCCcccCCCCCCCCC----EeECCCCCeeEeCCCCceeccccc
Confidence 445432 35677766776654 3543 68899999999999863
No 54
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=93.32 E-value=0.03 Score=42.38 Aligned_cols=46 Identities=26% Similarity=0.863 Sum_probs=30.7
Q ss_pred cccCCCCcccCCCCC---CCCCcccCCCCCCccCCCCCCCCCCCCCCC-CCC--CCeeeCCCCCC----CCCCC
Q psy15472 183 RCQCKPGVTGDKCDR---CDVNHYDFGEAGCKSCECNPAGSVKNTPNC-DSV--KGQCECKDNVE----GAQCR 246 (247)
Q Consensus 183 ~C~C~~g~~G~~C~~---C~~g~~g~~~~~C~~C~C~~~g~~~~~~~C-~~~--tG~C~C~~g~~----G~~C~ 246 (247)
.|.|++||+|..|+. |... +..|.. .| ... +.+|.|++||+ |.+|+
T Consensus 70 ~C~C~~G~~G~~C~~~deC~~~----------~~~C~~--------~C~~n~~g~y~C~C~~Gy~l~~dG~~C~ 125 (146)
T 1x7a_L 70 ECWCQVGFEGKNCELDATCNIK----------NGRCKQ--------FCKTGADSKVLCSCTTGYRLAPDQKSCK 125 (146)
T ss_dssp EEECCSSEESTTTCEECCTTSG----------GGSCSS--------BCCCCSSSCCCCBCCTTEEECTTSSSEE
T ss_pred EEecCCCCcCCcCCCCccccCC----------CCCCcC--------CCCCCCCCCEEeEcCCCcEeCCCCCcCC
Confidence 899999999999963 4321 122322 24 333 34799999999 88774
No 55
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=93.27 E-value=0.036 Score=40.02 Aligned_cols=17 Identities=35% Similarity=0.898 Sum_probs=15.0
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
+++|.|++||+|..|+.
T Consensus 34 ~y~C~C~~G~~G~~C~~ 50 (114)
T 1aut_L 34 SFSCDCRSGWEGRFCQR 50 (114)
T ss_dssp CCCEEECTTEESTTSCE
T ss_pred CcEeeCCCCCcCCCcCc
Confidence 67999999999999874
No 56
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=92.99 E-value=0.028 Score=33.83 Aligned_cols=17 Identities=35% Similarity=1.046 Sum_probs=15.3
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
.+.|.|++||+|.+|+.
T Consensus 27 ~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 27 QNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp EEEEEECTTCSSTTSCC
T ss_pred CEEEECCCCCccCCCCc
Confidence 57899999999999974
No 57
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=92.15 E-value=0.025 Score=42.16 Aligned_cols=35 Identities=29% Similarity=0.834 Sum_probs=0.0
Q ss_pred CCCCCcCCCCCCCCCCCcCCCC---CceeeCCCCCcCCCCCC
Q psy15472 50 GDNFCTACNCNPIGSLNLQCNS---EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 50 ~~~~C~~C~C~~~g~~~~~c~~---~g~C~C~~g~~G~~C~~ 88 (247)
..+.|.+-+|.+.+ .|.. .+.|.|++||+|..|+.
T Consensus 41 d~d~C~~~pC~n~g----~C~~~~~~y~C~C~~G~~G~~C~~ 78 (134)
T 2vh0_B 41 DGDQCETSPCQNQG----KCKDGLGEYTCTCLEGFEGKNCEL 78 (134)
T ss_dssp ------------------------------------------
T ss_pred CcCcCCCCCCCCcC----CcccCCCCEEeeCCCCccCCcccc
Confidence 34567666676544 3443 67899999999998864
No 58
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=91.48 E-value=0.051 Score=34.81 Aligned_cols=32 Identities=25% Similarity=0.604 Sum_probs=22.5
Q ss_pred CCccCCCCCCCCCCCCCCCCC-------CCCeeeCCCCCCCCCCC
Q psy15472 209 GCKSCECNPAGSVKNTPNCDS-------VKGQCECKDNVEGAQCR 246 (247)
Q Consensus 209 ~C~~C~C~~~g~~~~~~~C~~-------~tG~C~C~~g~~G~~C~ 246 (247)
.|.+-+|.++|+ |.. ....|.|++||+|.+|+
T Consensus 8 ~C~~~pC~ngG~------C~~~~~~~~~~~y~C~C~~Gf~G~~Ce 46 (63)
T 1hae_A 8 EKEKTFCVNGGE------CFMVKDLSNPSRYLCKCQPGFTGARCT 46 (63)
T ss_dssp HHHHTTSCTTCE------EEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred CCCCCcCCCCcE------EecCCccCCCCCEEEECCCCCcCCccC
Confidence 345556777554 542 23489999999999996
No 59
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=91.25 E-value=0.056 Score=46.63 Aligned_cols=50 Identities=26% Similarity=0.644 Sum_probs=36.4
Q ss_pred CccCCCCCCCcCCCCCCCCCCCcCCCC---CceeeCCCCCcCCCCCCCCCCcccCC
Q psy15472 45 YYQKSGDNFCTACNCNPIGSLNLQCNS---EGRCQCKPGVTGDKCDRCDVNHYDFG 97 (247)
Q Consensus 45 y~g~~~~~~C~~C~C~~~g~~~~~c~~---~g~C~C~~g~~G~~C~~C~~G~~g~~ 97 (247)
||...+..+--.|.|++++. .|.. .++|.|+.+.+|.+|++|.++|++.+
T Consensus 258 yYAI~di~v~G~C~CnGHA~---~C~~~~g~~~C~C~HnT~G~~Ce~C~p~y~~~p 310 (338)
T 3tbd_A 258 FYAISNIEVIGRCKCNLHAN---LCSMREGSLQCECEHNTTGPDCGKCKKNFRTRS 310 (338)
T ss_dssp CCEEEEEECEEEECCTTBCS---CEEEETTEEEECCCTTEESTTSCEECTTCBSSC
T ss_pred EEEeecceeeccccccCCcC---ccCCCCCCceecCCCCCCCCCCcccCccccCCC
Confidence 44433333334688888765 3432 45799999999999999999999876
No 60
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=91.22 E-value=0.064 Score=49.40 Aligned_cols=54 Identities=26% Similarity=0.697 Sum_probs=40.0
Q ss_pred CccccCCCCcc--cCCCCCCCCCcccCC--CCCCccCCCCCCCCCCCCCCCCCCCCeeeCCCCCC
Q psy15472 181 EGRCQCKPGVT--GDKCDRCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241 (247)
Q Consensus 181 ~G~C~C~~g~~--G~~C~~C~~g~~g~~--~~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~ 241 (247)
.|+|.|++||. +..|..|++|||... ...|++|+-+... -+.....|.|..+|.
T Consensus 262 ~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~s-------~~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 262 IGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLP-------SPEGATSCECEEGFF 319 (536)
T ss_dssp BCCCEECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEEC-------CCTTCSSCEECTTCB
T ss_pred cCcEeccCccccCCceeeecCCCCCcccCCCCccccCCCCCCC-------CCCCccEEEEecccc
Confidence 68999999997 677888999999875 5578888744321 222345789988875
No 61
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=91.10 E-value=0.049 Score=34.92 Aligned_cols=17 Identities=41% Similarity=1.134 Sum_probs=15.4
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
.+.|.|++||+|.+|+.
T Consensus 31 ~y~C~C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 31 RYLCKCQPGFTGARCTE 47 (63)
T ss_dssp CEEEECCTTEESTTSCE
T ss_pred CEEEECCCCCcCCccCc
Confidence 68999999999999973
No 62
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=91.02 E-value=0.077 Score=35.81 Aligned_cols=46 Identities=30% Similarity=0.860 Sum_probs=29.5
Q ss_pred cccCCCCcc--cCCCCCCCCCcccCCCCCCc-cCCCCCCCCCCCCCCCCCCCC--eeeCCCCCCCCC
Q psy15472 183 RCQCKPGVT--GDKCDRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQ 244 (247)
Q Consensus 183 ~C~C~~g~~--G~~C~~C~~g~~g~~~~~C~-~C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~~ 244 (247)
+|.|++||+ |..|+. .+.|. .-+|.+ +.|....| +|.|++||+|..
T Consensus 27 ~C~C~~Gy~~~g~~C~d---------ideC~~~~~C~~-------~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 27 RCECPFGYILAGNECVD---------TDECSVGNPCGN-------GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp CEECCTTEEEETTEEEE---------CCGGGTCCTTSS-------SCEEECSSSEEECCSSSSCCCS
T ss_pred EEECCCCeECCCCccCC---------cccccCCCCCCC-------CEeECCCCCEEeECCCCeEeCC
Confidence 899999997 777731 22333 223433 23554444 899999999853
No 63
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=90.69 E-value=0.12 Score=40.65 Aligned_cols=23 Identities=30% Similarity=0.803 Sum_probs=20.0
Q ss_pred CcCCCCCceeeCCCCCcCCCCCC
Q psy15472 66 NLQCNSEGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 66 ~~~c~~~g~C~C~~g~~G~~C~~ 88 (247)
++.|...++|.|++||+|.+|+.
T Consensus 158 gG~Cv~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 158 GGFCNERRICECPDGFHGPHCEG 180 (188)
T ss_dssp TCEECTTSCEECCTTCBTTTTCB
T ss_pred CCEeCCCCcccCcCCCCCCCCcC
Confidence 34688899999999999999985
No 64
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=90.07 E-value=0.13 Score=30.76 Aligned_cols=16 Identities=25% Similarity=0.823 Sum_probs=14.2
Q ss_pred CeeeCCCCCCCCCCCC
Q psy15472 232 GQCECKDNVEGAQCRS 247 (247)
Q Consensus 232 G~C~C~~g~~G~~C~~ 247 (247)
-.|.|++||+|.+|+.
T Consensus 28 ~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 28 NYCRCEVGYTGVRCEH 43 (46)
T ss_dssp EEEEECTTCSSTTSCC
T ss_pred EEEECCCCCccCCCCc
Confidence 3799999999999974
No 65
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=89.70 E-value=0.46 Score=40.18 Aligned_cols=32 Identities=34% Similarity=0.886 Sum_probs=23.2
Q ss_pred CCCcCCCCCCCCCCCcCCCC---CceeeCCCCCcCCCCC
Q psy15472 52 NFCTACNCNPIGSLNLQCNS---EGRCQCKPGVTGDKCD 87 (247)
Q Consensus 52 ~~C~~C~C~~~g~~~~~c~~---~g~C~C~~g~~G~~C~ 87 (247)
+.|..-+|.+.+. |.. .+.|.|++||+|.+|+
T Consensus 6 ~~C~~~pC~~~g~----C~~~~~~~~C~C~~g~~g~~C~ 40 (317)
T 3h5c_B 6 SPCISQPCLHNGS----CQDSIWGYTCTCSPGYEGSNCE 40 (317)
T ss_dssp CCTTSCCCTTTCC----CCCCSSSCCCCCSSSCCSSSSC
T ss_pred CcCCCCCCCCCCE----eECCCCCeEEECCCCCcCCccc
Confidence 4566666665543 432 6889999999999997
No 66
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=89.58 E-value=0.044 Score=43.68 Aligned_cols=49 Identities=24% Similarity=0.730 Sum_probs=18.3
Q ss_pred cccCCCCcccCCCCCCCCCcccCCCCCCcc--CCCCCCCCCCCCCCCCCCCC--eeeCCCCCC----CCCCC
Q psy15472 183 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKS--CECNPAGSVKNTPNCDSVKG--QCECKDNVE----GAQCR 246 (247)
Q Consensus 183 ~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~--C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~----G~~C~ 246 (247)
.|.|++||+|..|+.= . .+.|.. ..|.+ .|....| +|.|++||+ |.+|+
T Consensus 64 ~C~C~~Gf~G~~Ce~~------i-~deC~~~~~~C~~--------~C~n~~gsy~C~C~~Gy~l~~dG~~C~ 120 (195)
T 1nfu_B 64 TCTCLEGFEGKNCELF------T-RKLCSLDNGDCDQ--------FCHEEQNSVVCSCARGYTLADNGKACI 120 (195)
T ss_dssp ------------------------CCGGGTGGGGCSS--------EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred eEeCCCCceecccccc------c-cccccCCCCCCCC--------EeECCCCCeEEECCCCceeCCCCCccc
Confidence 8999999999998530 0 012322 23332 2544334 799999999 88874
No 67
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=89.52 E-value=0.094 Score=32.45 Aligned_cols=15 Identities=27% Similarity=0.729 Sum_probs=13.8
Q ss_pred CeeeCCCCCCCCCCC
Q psy15472 232 GQCECKDNVEGAQCR 246 (247)
Q Consensus 232 G~C~C~~g~~G~~C~ 246 (247)
..|+|++||+|.+|+
T Consensus 29 ~~C~C~~GytG~~Ce 43 (53)
T 1nql_B 29 YACNCVVGYIGERCQ 43 (53)
T ss_dssp EEEEECTTEESTTSC
T ss_pred EEEecCCCCcCCCCC
Confidence 389999999999997
No 68
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=89.20 E-value=0.051 Score=34.78 Aligned_cols=36 Identities=22% Similarity=0.626 Sum_probs=24.2
Q ss_pred CCCCccCCCCCCCCCCCCCCCCCCCC--eeeCCCCCC-CCCCC
Q psy15472 207 EAGCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVE-GAQCR 246 (247)
Q Consensus 207 ~~~C~~C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~-G~~C~ 246 (247)
.+.|.+-+|.++. .++|....+ .|.|++||+ |.+|+
T Consensus 11 ~d~C~snPC~nga----~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 11 PAACSSNPCGPEA----AGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp CCHHHHCSSCSSS----CCEEEECSSEEEEECCTTEEEEECSS
T ss_pred CCcCcCCCCcCCC----ccccccCCCceEeECCCCCccCCCCC
Confidence 3456666777650 023654443 899999999 99986
No 69
>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R
Probab=89.17 E-value=0.065 Score=40.52 Aligned_cols=79 Identities=28% Similarity=0.803 Sum_probs=47.3
Q ss_pred ccCCCCCCC---------CCCCCCCCCCCccCCC-CCCCcCCC-CCCC-CC-CCcCCCC--CceeeCCCCCc-------C
Q psy15472 26 CLDCQGDRD---------GPNCEKCRDNYYQKSG-DNFCTACN-CNPI-GS-LNLQCNS--EGRCQCKPGVT-------G 83 (247)
Q Consensus 26 C~~C~~~~~---------G~~Ce~C~~Gy~g~~~-~~~C~~C~-C~~~-g~-~~~~c~~--~g~C~C~~g~~-------G 83 (247)
|..|++|+. ...|..|++|+|-+.. ...|++|. |... +. ....|.. .-+|.|++||. .
T Consensus 19 C~~C~pG~~~~~~Ct~~~~t~C~~C~~gty~~~~~~~~C~~C~~C~~~~g~~~~~~Ct~t~dt~C~C~~G~y~~~g~~~~ 98 (146)
T 2hey_R 19 CHECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYKPG 98 (146)
T ss_dssp EECBCTTEEEEECCCSSCCCEEEECCTTEECCSCBSSCCEECCCCCGGGTEEEEECCBTTBCCEEEECTTEEESCSSSTT
T ss_pred CCCCCCCCeecccCCCCCCCCcccCCCCCEECCCCCCcCcccCCCCCCCCceEeccCccCCCccccCCCCeeeCCCcccC
Confidence 467777763 3467789999886652 34677765 5432 11 1122433 56799999864 3
Q ss_pred CCCCCCCCCcccCC-CCCcccc
Q psy15472 84 DKCDRCDVNHYDFG-EAGCKSC 104 (247)
Q Consensus 84 ~~C~~C~~G~~g~~-~~~C~~C 104 (247)
..|..|++|+|-.. ...|+++
T Consensus 99 ~~C~~C~~Gtfs~~~~~~C~~~ 120 (146)
T 2hey_R 99 VDCAPCPPGHFSPGDNQACKPW 120 (146)
T ss_dssp SSEEECCTTEECCSTTCCCEEC
T ss_pred cccccCCCCcccCCCCCCCcCC
Confidence 46777888887543 1234443
No 70
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=89.03 E-value=0.19 Score=39.47 Aligned_cols=22 Identities=32% Similarity=0.924 Sum_probs=18.2
Q ss_pred CCCCCCCCeeeCCCCCCCCCCCC
Q psy15472 225 PNCDSVKGQCECKDNVEGAQCRS 247 (247)
Q Consensus 225 ~~C~~~tG~C~C~~g~~G~~C~~ 247 (247)
+.|.. .++|.|++||+|..|++
T Consensus 159 G~Cv~-P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 159 GFCNE-RRICECPDGFHGPHCEG 180 (188)
T ss_dssp CEECT-TSCEECCTTCBTTTTCB
T ss_pred CEeCC-CCcccCcCCCCCCCCcC
Confidence 34663 78999999999999974
No 71
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=87.97 E-value=0.68 Score=39.09 Aligned_cols=14 Identities=43% Similarity=1.379 Sum_probs=12.5
Q ss_pred cccCCCCcccCCCC
Q psy15472 183 RCQCKPGVTGDKCD 196 (247)
Q Consensus 183 ~C~C~~g~~G~~C~ 196 (247)
.|.|++||+|..|+
T Consensus 27 ~C~C~~g~~g~~C~ 40 (317)
T 3h5c_B 27 TCTCSPGYEGSNCE 40 (317)
T ss_dssp CCCCSSSCCSSSSC
T ss_pred EEECCCCCcCCccc
Confidence 78999999999886
No 72
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=87.56 E-value=0.12 Score=39.00 Aligned_cols=58 Identities=16% Similarity=0.496 Sum_probs=34.8
Q ss_pred eccCCCCCCC---------CCCCCCCCCCCccCC--CCCCCcCCC-CCCCCCC-CcCCCC--CceeeCCCCCc
Q psy15472 25 HCLDCQGDRD---------GPNCEKCRDNYYQKS--GDNFCTACN-CNPIGSL-NLQCNS--EGRCQCKPGVT 82 (247)
Q Consensus 25 ~C~~C~~~~~---------G~~Ce~C~~Gy~g~~--~~~~C~~C~-C~~~g~~-~~~c~~--~g~C~C~~g~~ 82 (247)
-|..|++|+. ...|+.|++|+|-+. ....|++|. |...+.+ ...|.. .-+|.|++||.
T Consensus 16 cC~~CppG~~~~~~C~~~~~t~C~pC~~gty~~~~n~~~~C~~C~~C~~~~~~~~~~Ct~t~dtvC~C~~G~y 88 (142)
T 2uwi_A 16 CCKLCKPGTYSDHRCDKYSDTICGHCPSDTFTSIYNRSPWCHSCRGPCGTNRVEVTPCTPTTNRICHCDSNSY 88 (142)
T ss_dssp EEECBCTTEEEEECCCSSCCCEEEECCTTEECCSSBCCSSCEECCCCCCTTEEEEECCBTTBCCEEEECTTEE
T ss_pred CCCCCCCCCeeCccCCCCCCCccCcCCCCCCcccCCCCCccCCCcCcccCCeeEeecCCCCCCCEeeCCCCcE
Confidence 4556776665 456888999988764 234688775 4432221 123433 46777777765
No 73
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=87.51 E-value=0.17 Score=42.59 Aligned_cols=15 Identities=40% Similarity=1.249 Sum_probs=13.8
Q ss_pred ccccCCCCcccCCCC
Q psy15472 182 GRCQCKPGVTGDKCD 196 (247)
Q Consensus 182 G~C~C~~g~~G~~C~ 196 (247)
|+|.|.+||+|..|+
T Consensus 207 G~C~C~~g~~G~~Ce 221 (280)
T 2p26_A 207 GICRCDTGYIGKNCE 221 (280)
T ss_dssp TEEEECTTEESTTSC
T ss_pred CceeCCCCCcCCcce
Confidence 789999999999995
No 74
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=86.72 E-value=0.1 Score=39.89 Aligned_cols=16 Identities=25% Similarity=0.592 Sum_probs=13.3
Q ss_pred CceeeCCCCCc----CCCCC
Q psy15472 72 EGRCQCKPGVT----GDKCD 87 (247)
Q Consensus 72 ~g~C~C~~g~~----G~~C~ 87 (247)
+++|.|++||+ |..|+
T Consensus 23 sy~C~C~~Gy~~~~~g~~C~ 42 (162)
T 1uzk_A 23 SYICDCPPDFELNPTRVGCV 42 (162)
T ss_dssp EEEEECCTTCEECTTSSBEE
T ss_pred CEEEeCCCCCeECCCCCccc
Confidence 68999999998 66665
No 75
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=86.28 E-value=0.063 Score=34.35 Aligned_cols=37 Identities=24% Similarity=0.475 Sum_probs=23.8
Q ss_pred CCCCcCCCCCCC--CCCCcCCCCCceeeCCCCCc-CCCCCC
Q psy15472 51 DNFCTACNCNPI--GSLNLQCNSEGRCQCKPGVT-GDKCDR 88 (247)
Q Consensus 51 ~~~C~~C~C~~~--g~~~~~c~~~g~C~C~~g~~-G~~C~~ 88 (247)
.+.|.+-+|.+. ++.... ..++.|+|++||+ |.+|+.
T Consensus 11 ~d~C~snPC~nga~gtC~~~-~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGTCKET-NSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp CCHHHHCSSCSSSCCEEEEC-SSEEEEECCTTEEEEECSSS
T ss_pred CCcCcCCCCcCCCccccccC-CCceEeECCCCCccCCCCCC
Confidence 345666667654 322111 1268999999999 999863
No 76
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=86.11 E-value=0.23 Score=30.61 Aligned_cols=23 Identities=26% Similarity=0.764 Sum_probs=18.2
Q ss_pred CceeeCCCCCcCCCCCCCCCCcc
Q psy15472 72 EGRCQCKPGVTGDKCDRCDVNHY 94 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~C~~G~~ 94 (247)
.+.|+|++||+|.+|+.=...+|
T Consensus 28 ~~~C~C~~GytG~~Ce~~~~~~~ 50 (53)
T 1nql_B 28 KYACNCVVGYIGERCQYRDLKWW 50 (53)
T ss_dssp EEEEEECTTEESTTSCEECSSCC
T ss_pred CEEEecCCCCcCCCCCcCCcccc
Confidence 57999999999999986444444
No 77
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=85.34 E-value=0.12 Score=38.82 Aligned_cols=19 Identities=21% Similarity=0.683 Sum_probs=13.9
Q ss_pred CCCCCCC--eeeCCCCCCCCC
Q psy15472 226 NCDSVKG--QCECKDNVEGAQ 244 (247)
Q Consensus 226 ~C~~~tG--~C~C~~g~~G~~ 244 (247)
.|....| +|.|++||+|..
T Consensus 121 ~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 121 LCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp EEEEETTEEEEECCTTCCBCT
T ss_pred EEECCCCCEEeeCCCCCccCC
Confidence 3554444 899999999864
No 78
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=84.70 E-value=0.09 Score=39.03 Aligned_cols=16 Identities=38% Similarity=0.816 Sum_probs=13.4
Q ss_pred CceeeCCCCCc----CCCCC
Q psy15472 72 EGRCQCKPGVT----GDKCD 87 (247)
Q Consensus 72 ~g~C~C~~g~~----G~~C~ 87 (247)
++.|.|++||+ |..|+
T Consensus 101 ~y~C~C~~Gy~l~~~g~~C~ 120 (134)
T 2vh0_B 101 SVVCSCARGYTLADNGKACI 120 (134)
T ss_dssp EEEEECCTTEEECTTSSCEE
T ss_pred CEEEECCCCcEECCCCCccC
Confidence 57899999999 77775
No 79
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=83.89 E-value=0.42 Score=29.16 Aligned_cols=17 Identities=29% Similarity=0.868 Sum_probs=15.0
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
.+.|.|++||+|.+|+.
T Consensus 32 ~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 32 VYSCECAIGFMGQRCEY 48 (52)
T ss_dssp EEEEECCTTEESTTSCE
T ss_pred CEEEECCCCCcCCCCcc
Confidence 56899999999999974
No 80
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=83.46 E-value=0.18 Score=34.16 Aligned_cols=46 Identities=24% Similarity=0.663 Sum_probs=28.7
Q ss_pred cccCCCCcc-----cCCCCCCCCCcccCCCCCCcc--CCCCCCCCCCCCCCCCCCCC--eeeCCCCCCCCC
Q psy15472 183 RCQCKPGVT-----GDKCDRCDVNHYDFGEAGCKS--CECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQ 244 (247)
Q Consensus 183 ~C~C~~g~~-----G~~C~~C~~g~~g~~~~~C~~--C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~~ 244 (247)
.|.|++||+ |..|+. .+.|.. +.|.+ +.|....| +|.|++||++..
T Consensus 26 ~C~C~~Gy~~~~~~g~~C~d---------ideC~~~~~~C~~-------~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 26 ECKCDEGYESGFMMMKNCMD---------IDECQRDPLLCRG-------GVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp EECCCSSEEECTTTSSSEEE---------CCHHHHCSSTTTT-------SEEEEETTEEEEESCTTSCCCS
T ss_pred EeeCCCCcCccCCCCCccCC---------cccccCCCCcCCC-------CEeEcCCCCEEEECcCCcccCC
Confidence 899999998 555521 233432 22432 23554444 899999999853
No 81
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=83.25 E-value=0.53 Score=31.53 Aligned_cols=14 Identities=21% Similarity=0.539 Sum_probs=11.3
Q ss_pred CceeeCCCCCcCCC
Q psy15472 72 EGRCQCKPGVTGDK 85 (247)
Q Consensus 72 ~g~C~C~~g~~G~~ 85 (247)
++.|.|++||+|..
T Consensus 64 ~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 64 GFECTCEEGFEPGP 77 (82)
T ss_dssp SEEECCSSSSCCCS
T ss_pred CEEeECCCCeEeCC
Confidence 67899999988754
No 82
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=83.11 E-value=0.32 Score=44.72 Aligned_cols=54 Identities=26% Similarity=0.586 Sum_probs=37.3
Q ss_pred CceeeCCCCCc--CCCCCCCCCCcccCC--CCCcccccCCCCCCCCCCCCCcCCCCceeccCCCC
Q psy15472 72 EGRCQCKPGVT--GDKCDRCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132 (247)
Q Consensus 72 ~g~C~C~~g~~--G~~C~~C~~G~~g~~--~~~C~~C~C~~~g~~~~~~~C~~~tG~C~c~~~~~ 132 (247)
.|+|.|++||. +..|+.|++|||... ...|++|+-+.... +.-...|.|..++.
T Consensus 262 ~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~s~-------~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 262 IGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLPS-------PEGATSCECEEGFF 319 (536)
T ss_dssp BCCCEECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEECC-------CTTCSSCEECTTCB
T ss_pred cCcEeccCccccCCceeeecCCCCCcccCCCCccccCCCCCCCC-------CCCccEEEEecccc
Confidence 79999999997 677899999999864 34588876543321 22344676665543
No 83
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=82.61 E-value=0.54 Score=28.64 Aligned_cols=16 Identities=31% Similarity=0.833 Sum_probs=14.1
Q ss_pred CeeeCCCCCCCCCCCC
Q psy15472 232 GQCECKDNVEGAQCRS 247 (247)
Q Consensus 232 G~C~C~~g~~G~~C~~ 247 (247)
-.|.|++||+|.+|+.
T Consensus 30 ~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 30 PACVCHSGYVGARCEH 45 (50)
T ss_pred eEEECCCCCcccCCCc
Confidence 3799999999999974
No 84
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=82.27 E-value=0.67 Score=28.20 Aligned_cols=15 Identities=27% Similarity=0.917 Sum_probs=13.7
Q ss_pred eeeCCCCCCCCCCCC
Q psy15472 233 QCECKDNVEGAQCRS 247 (247)
Q Consensus 233 ~C~C~~g~~G~~C~~ 247 (247)
.|.|+++|+|.+|+.
T Consensus 35 ~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 35 TCKCQQEYFGERCGE 49 (50)
T ss_dssp EEECCSSCCSSSCCC
T ss_pred eEECCCCcccccccc
Confidence 699999999999984
No 85
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=82.25 E-value=0.44 Score=32.31 Aligned_cols=46 Identities=22% Similarity=0.613 Sum_probs=27.1
Q ss_pred cccCCCCcc----cCCCCCCCCCcccCCCCCCccCCCCCCCCCCCCCCCCCCC--CeeeCCCCCCCCCCC
Q psy15472 183 RCQCKPGVT----GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK--GQCECKDNVEGAQCR 246 (247)
Q Consensus 183 ~C~C~~g~~----G~~C~~C~~g~~g~~~~~C~~C~C~~~g~~~~~~~C~~~t--G~C~C~~g~~G~~C~ 246 (247)
+|.|++||+ |..|+. .+.|..-+|. +.|.... .+|.|+ ++.|..++
T Consensus 26 ~C~C~~G~~~~~~g~~C~d---------ideC~~~~C~--------~~C~n~~g~y~C~C~-g~~G~~~~ 77 (87)
T 1z6c_A 26 ECECPEGYRYNLKSKSCED---------IDECSENMCA--------QLCVNYPGGYTCYCD-GKKGFKLA 77 (87)
T ss_dssp CCSSSTTCEEETTTTEEEC---------CCHHHHSCCS--------SEECCCSSSCCEECC-SSSCCBCC
T ss_pred EEECCCCceECCCCCcCCC---------cCeeCCCCCC--------CEEEccCCCEEEECC-CCcCCccc
Confidence 899999999 666631 2334333343 1244433 389997 66666553
No 86
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=81.05 E-value=0.5 Score=29.65 Aligned_cols=17 Identities=29% Similarity=0.868 Sum_probs=15.1
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
...|.|++||+|.+|+.
T Consensus 32 ~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 32 VYSCECAIGFMGQRCEY 48 (58)
T ss_dssp EEEEEECTTEESSSSCE
T ss_pred CEEeECCCCCccCCCcc
Confidence 56899999999999984
No 87
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=80.83 E-value=0.53 Score=28.64 Aligned_cols=15 Identities=33% Similarity=0.961 Sum_probs=13.6
Q ss_pred eeeCCCCCCCCCCCC
Q psy15472 233 QCECKDNVEGAQCRS 247 (247)
Q Consensus 233 ~C~C~~g~~G~~C~~ 247 (247)
.|.|++||+|.+|+.
T Consensus 31 ~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 31 SCVCDEGYIGARCER 45 (50)
T ss_dssp EECCCTTEETTTTCE
T ss_pred EEECCCCcccCCCCe
Confidence 699999999999973
No 88
>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*
Probab=80.69 E-value=0.58 Score=36.01 Aligned_cols=59 Identities=31% Similarity=0.774 Sum_probs=32.1
Q ss_pred eeccCCCCCC---------CCCCCCCCCCCCccCC--CCCCCcCCC-CCCC-CCC-CcCCCC--CceeeCCCCCc
Q psy15472 24 GHCLDCQGDR---------DGPNCEKCRDNYYQKS--GDNFCTACN-CNPI-GSL-NLQCNS--EGRCQCKPGVT 82 (247)
Q Consensus 24 g~C~~C~~~~---------~G~~Ce~C~~Gy~g~~--~~~~C~~C~-C~~~-g~~-~~~c~~--~g~C~C~~g~~ 82 (247)
..|..|++|+ ....|..|++|+|-+. ....|++|. |... +.. ...|.. .-+|.|++||.
T Consensus 14 ~~C~~CppG~~~~~~C~~~~~t~C~~Cp~GtY~~~~n~~~~C~~C~~C~~~~g~~~~~~Ct~t~~t~C~C~~G~y 88 (167)
T 1jma_B 14 ECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCGCSPGHF 88 (167)
T ss_dssp BCCBCBCTTEEEEECCCSSSCCEEEECCTTEECSSCBCSSCCEECCCCCTTTTEEEEECCCSSSCCEEEECTTEE
T ss_pred cCCCCCCCCCEeccCCCCCCCCcCCcCCCCccccccCcCccccCCcccccCCCeEEeccCCCCCCCcccCCCCce
Confidence 3566677776 2456777888888663 234677764 4431 211 112222 34566666654
No 89
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=80.65 E-value=0.47 Score=29.79 Aligned_cols=15 Identities=33% Similarity=0.866 Sum_probs=13.7
Q ss_pred eeeCCCCCCCCCCCC
Q psy15472 233 QCECKDNVEGAQCRS 247 (247)
Q Consensus 233 ~C~C~~g~~G~~C~~ 247 (247)
.|.|++||+|.+|+.
T Consensus 34 ~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 34 SCECAIGFMGQRCEY 48 (58)
T ss_dssp EEEECTTEESSSSCE
T ss_pred EeECCCCCccCCCcc
Confidence 799999999999973
No 90
>1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X
Probab=80.49 E-value=0.45 Score=36.34 Aligned_cols=48 Identities=27% Similarity=0.683 Sum_probs=23.2
Q ss_pred CCCCCCCCCC-CccCCC--CCCCcCCC-CCCCCCCCcCCCC--CceeeCCCCCc
Q psy15472 35 GPNCEKCRDN-YYQKSG--DNFCTACN-CNPIGSLNLQCNS--EGRCQCKPGVT 82 (247)
Q Consensus 35 G~~Ce~C~~G-y~g~~~--~~~C~~C~-C~~~g~~~~~c~~--~g~C~C~~g~~ 82 (247)
...|..|++| +|-+.. ...|++|. |...-.+...|.. ..+|.|++||.
T Consensus 33 ~t~C~~C~~g~ty~~~~~~~~~C~~C~~C~~~~~~~~~Ct~t~d~~C~C~~G~y 86 (161)
T 1sg1_X 33 QTVCEPCLDNVTFSDVVSATEPCKPCTECLGLQSMSAPCVEADDAVCRCAYGYY 86 (161)
T ss_dssp SCEEEECCTTTEECCSCBSSCCCEECCCCCTTEEEEECCBTTBCCEEEECTTEE
T ss_pred CCcCcCCcCCCccccCCCCCCcCcCCCCCCCcceeecCCCcccCceeccCCCeE
Confidence 3457778877 554432 34566664 4322111122322 35566666554
No 91
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=80.40 E-value=0.79 Score=27.89 Aligned_cols=17 Identities=29% Similarity=0.995 Sum_probs=15.0
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
...|.|++||+|.+|+.
T Consensus 29 ~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 29 KPACVCHSGYVGARCEH 45 (50)
T ss_pred CeEEECCCCCcccCCCc
Confidence 56899999999999974
No 92
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=80.22 E-value=0.16 Score=38.83 Aligned_cols=58 Identities=22% Similarity=0.581 Sum_probs=37.1
Q ss_pred CeeccCCCCCCC-CCCCCCC------------CC--CCccCC------CCCCCcC--CCCCCCCCCCcCCC---CCceee
Q psy15472 23 GGHCLDCQGDRD-GPNCEKC------------RD--NYYQKS------GDNFCTA--CNCNPIGSLNLQCN---SEGRCQ 76 (247)
Q Consensus 23 ~g~C~~C~~~~~-G~~Ce~C------------~~--Gy~g~~------~~~~C~~--C~C~~~g~~~~~c~---~~g~C~ 76 (247)
+.+| .|+++|. |..|+.| ++ ||.+.. .+++|.. -.|.+ + .|. .+++|.
T Consensus 74 ~~~C-~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g----~C~n~~gsy~C~ 147 (162)
T 1uzk_A 74 KASC-CCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-G----KCINTFGSFQCR 147 (162)
T ss_dssp HHHH-HTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-S----EEEECSSCEEEE
T ss_pred Ccee-eCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-C----EeEcCCCCEEee
Confidence 4678 5999998 8888754 33 888763 2445542 12432 2 333 268999
Q ss_pred CCCCCcCCCC
Q psy15472 77 CKPGVTGDKC 86 (247)
Q Consensus 77 C~~g~~G~~C 86 (247)
|++||+|..-
T Consensus 148 C~~Gy~g~~d 157 (162)
T 1uzk_A 148 CPTGYYLNED 157 (162)
T ss_dssp CCTTCCBCTT
T ss_pred CCCCccCCCC
Confidence 9999988653
No 93
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=79.75 E-value=0.67 Score=28.18 Aligned_cols=17 Identities=35% Similarity=1.027 Sum_probs=15.0
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
...|.|++||+|.+||.
T Consensus 29 ~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 29 TPSCVCDEGYIGARCER 45 (50)
T ss_dssp EEEECCCTTEETTTTCE
T ss_pred CeEEECCCCcccCCCCe
Confidence 46799999999999984
No 94
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=79.60 E-value=0.98 Score=27.45 Aligned_cols=17 Identities=24% Similarity=0.827 Sum_probs=14.8
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
...|.|+++|+|.+|+.
T Consensus 33 ~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 33 AVTCKCQQEYFGERCGE 49 (50)
T ss_dssp EEEEECCSSCCSSSCCC
T ss_pred CeeEECCCCcccccccc
Confidence 46799999999999974
No 95
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=78.82 E-value=1.1 Score=30.27 Aligned_cols=15 Identities=33% Similarity=0.563 Sum_probs=11.1
Q ss_pred CceeeCCCCCcCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCD 87 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~ 87 (247)
+++|.|+ ++.|..++
T Consensus 63 ~y~C~C~-g~~G~~~~ 77 (87)
T 1z6c_A 63 GYTCYCD-GKKGFKLA 77 (87)
T ss_dssp SCCEECC-SSSCCBCC
T ss_pred CEEEECC-CCcCCccc
Confidence 6789997 77776654
No 96
>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A
Probab=78.33 E-value=0.59 Score=39.78 Aligned_cols=72 Identities=22% Similarity=0.492 Sum_probs=44.3
Q ss_pred CeeccCCCCCCC---------CCCCCCCCCCCccCC--CCCCCcCCC--CCCCCCCCcCCCC--CceeeCCCCCcCC---
Q psy15472 23 GGHCLDCQGDRD---------GPNCEKCRDNYYQKS--GDNFCTACN--CNPIGSLNLQCNS--EGRCQCKPGVTGD--- 84 (247)
Q Consensus 23 ~g~C~~C~~~~~---------G~~Ce~C~~Gy~g~~--~~~~C~~C~--C~~~g~~~~~c~~--~g~C~C~~g~~G~--- 84 (247)
..-|..|++|+. ...|..|++|.|-.. ....|++|. |...-.....|.. .-+|.|++||+=.
T Consensus 23 ~~CC~~CpPGtyv~~~Ct~~~dt~C~pCp~GtYt~~~N~~~~C~~C~~~C~~g~~~~~~CT~TsDtvC~C~~G~y~~~~~ 102 (313)
T 3u3p_A 23 VLTCDKCPAGTYVSEHCTNTSLRVCSSCPVGTFTRHENGIEKCHDCSQPCPWPMIEKLPCAALTDRECTCPPGMFQSNAT 102 (313)
T ss_dssp EEEEECBCTTEEEEECCBTTBCCEEEECCTTEECCSCBCCSSCEECCCCCCTTCEEEECSBTTBCCEEECCTTEEEETTE
T ss_pred CCCCCCCCCCceecCcCCCCCCCccccCCCCceeccCCCCCcCcccccccCCCCEEecCCcCCCCccccCCCCceecccc
Confidence 345667887775 456788999988764 346788886 7532111233443 4678888888621
Q ss_pred --CCCCCCCCcc
Q psy15472 85 --KCDRCDVNHY 94 (247)
Q Consensus 85 --~C~~C~~G~~ 94 (247)
.|..|++|++
T Consensus 103 C~~Ct~CppG~g 114 (313)
T 3u3p_A 103 CAPHTVCPVGWG 114 (313)
T ss_dssp EEECCCBCTTEE
T ss_pred ccccccCCCCCe
Confidence 1335666664
No 97
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=78.15 E-value=0.86 Score=32.49 Aligned_cols=13 Identities=38% Similarity=1.163 Sum_probs=6.3
Q ss_pred eeeCCCCCCCCCC
Q psy15472 233 QCECKDNVEGAQC 245 (247)
Q Consensus 233 ~C~C~~g~~G~~C 245 (247)
+|.|++||+|..|
T Consensus 36 ~C~C~~G~~G~~C 48 (114)
T 1aut_L 36 SCDCRSGWEGRFC 48 (114)
T ss_dssp CEEECTTEESTTS
T ss_pred EeeCCCCCcCCCc
Confidence 4455555554444
No 98
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=76.69 E-value=0.76 Score=35.59 Aligned_cols=60 Identities=28% Similarity=0.698 Sum_probs=35.5
Q ss_pred CeeccCCCCCCC---------CCCCCCCCCCCccCC--CCCCCcCCC--CCCCCCCCcCCCC--CceeeCCCCCc
Q psy15472 23 GGHCLDCQGDRD---------GPNCEKCRDNYYQKS--GDNFCTACN--CNPIGSLNLQCNS--EGRCQCKPGVT 82 (247)
Q Consensus 23 ~g~C~~C~~~~~---------G~~Ce~C~~Gy~g~~--~~~~C~~C~--C~~~g~~~~~c~~--~g~C~C~~g~~ 82 (247)
..-|..|++|+. ...|+.|++|+|-.. ....|++|. |.........|.. .-+|.|++||.
T Consensus 17 ~~cC~~CppG~~~~~~Ct~~~~t~C~~C~~gty~~~~n~~~~C~~C~~~C~~~~~~~~~CT~tsdtvC~C~~G~~ 91 (171)
T 3urf_Z 17 QLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRY 91 (171)
T ss_dssp CCEEECBCTTEEEEECCCSSSCCEEEECCTTEECCSCBCCSSCEECCCCCCTTEEEEECCCSSSCCEEEECTTEE
T ss_pred CCCCCCCCCCceecccCCCCCCCccccCCCCcEecCCCCCCccccCcCccCCCCEEeccCcCCCCccccCCCCcE
Confidence 344656776664 346778999988665 246788776 5432212223443 46677777665
No 99
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=76.03 E-value=0.29 Score=46.31 Aligned_cols=44 Identities=25% Similarity=0.578 Sum_probs=31.4
Q ss_pred cCCCCcccCCCCCCCCCcccCCCCCCccCCCCCCCCCCCCCCCCCCCCeeeCCCCCCCCCCC
Q psy15472 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246 (247)
Q Consensus 185 ~C~~g~~G~~C~~C~~g~~g~~~~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~ 246 (247)
.|.++|+|..|.. + ..|.. .|..+|. |. .|+|+|.+||+|..|+
T Consensus 521 ~C~~gw~g~dc~i------~---~~Cp~-~C~ghG~------C~--~G~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAIDNVYI------G---DGCLD-MCSGHGR------CV--QGSCVCDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEEEEEEE------E---SCSSG-GGGGSEE------EE--TTEEEECTTEESTTSC
T ss_pred ccCCCcccccccc------c---CCCCc-ccCCCcE------EC--CCCEeeCCCccCCCcC
Confidence 6788888888841 1 12322 5666654 65 5999999999999996
No 100
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=73.42 E-value=0.62 Score=33.01 Aligned_cols=44 Identities=23% Similarity=0.768 Sum_probs=11.6
Q ss_pred cccCCCCccc---CCCCCCCCCcccCCCCCCcc-CCCCCCCCCCCCCCCCCCCC--eeeCCCCCCCC
Q psy15472 183 RCQCKPGVTG---DKCDRCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKG--QCECKDNVEGA 243 (247)
Q Consensus 183 ~C~C~~g~~G---~~C~~C~~g~~g~~~~~C~~-C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~ 243 (247)
.|.|++||+| ..|+. .+.|.. -+|. +.|....| +|.|++||.+.
T Consensus 51 ~C~C~~Gy~g~~g~~C~d---------ideC~~~~~C~--------~~C~n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 51 ECLCPDGFQLVAQRRCED---------IDECQDPDTCS--------QLCVNLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp EEECCTTCEEETTTEEEC-------------------------------------------------
T ss_pred EEECCCCccccCCCcccc---------ccccCCCCCcC--------CeeecCCCCEEEECCCCceEC
Confidence 8999999998 55531 223321 1232 23554444 89999999974
No 101
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=71.92 E-value=1 Score=34.87 Aligned_cols=48 Identities=25% Similarity=0.622 Sum_probs=28.8
Q ss_pred cCCCCCCCCCcccCC---CCCCccCC--CCCCCCCCCCCCCCCCCC-eeeCCCCCC
Q psy15472 192 GDKCDRCDVNHYDFG---EAGCKSCE--CNPAGSVKNTPNCDSVKG-QCECKDNVE 241 (247)
Q Consensus 192 G~~C~~C~~g~~g~~---~~~C~~C~--C~~~g~~~~~~~C~~~tG-~C~C~~g~~ 241 (247)
...|..|++|+|-.. ...|++|. |.....+ ...|...+. +|.|++||.
T Consensus 38 ~t~C~~C~~gty~~~~n~~~~C~~C~~~C~~~~~~--~~~CT~tsdtvC~C~~G~~ 91 (171)
T 3urf_Z 38 KTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYV--KQECNRTHNRVCECKEGRY 91 (171)
T ss_dssp CCEEEECCTTEECCSCBCCSSCEECCCCCCTTEEE--EECCCSSSCCEEEECTTEE
T ss_pred CCccccCCCCcEecCCCCCCccccCcCccCCCCEE--eccCcCCCCccccCCCCcE
Confidence 345667888877554 35688876 6543221 234655443 688888874
No 102
>4fhq_A Tumor necrosis factor receptor superfamily member; cysteine rich domain, TNF receptor, structural genomics, PSI protein structure initiative; 2.25A {Homo sapiens} PDB: 2aw2_B*
Probab=70.01 E-value=0.92 Score=33.66 Aligned_cols=57 Identities=32% Similarity=0.836 Sum_probs=32.0
Q ss_pred ccCCCCCCC---------CCCCCCCCCCCccCC--CCCCCcCCC-CCC-CCC-CCcCCCC--CceeeCCCCCc
Q psy15472 26 CLDCQGDRD---------GPNCEKCRDNYYQKS--GDNFCTACN-CNP-IGS-LNLQCNS--EGRCQCKPGVT 82 (247)
Q Consensus 26 C~~C~~~~~---------G~~Ce~C~~Gy~g~~--~~~~C~~C~-C~~-~g~-~~~~c~~--~g~C~C~~g~~ 82 (247)
|..|++|+. ...|+.|++|+|-+. ....|++|. |.. .+. ....|.. .-+|.|++||.
T Consensus 18 C~~CppG~~~~~~C~~~~~t~C~pC~~gtys~~~n~~~~C~~C~~C~~~~g~~~~~~CT~t~dtvC~C~~G~~ 90 (134)
T 4fhq_A 18 CPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCGCSPGHF 90 (134)
T ss_dssp EECBCTTEEEEECCC--CCCEEEECCTTEECCSCBCCSSCEECCCCCGGGTEEEEECCCSSSCCEEEECTTEE
T ss_pred CCCCCCCCEecccCCCCCCCcccCCCCCCEecCCCCCCcCcCCCCCCccCCeEEeccCCCCCCccccCCCCCE
Confidence 445655554 446778888888664 345677765 542 121 1123333 45677777665
No 103
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=68.85 E-value=2.4 Score=30.68 Aligned_cols=16 Identities=25% Similarity=0.777 Sum_probs=14.1
Q ss_pred ceeeCCCCCcCCCCCC
Q psy15472 73 GRCQCKPGVTGDKCDR 88 (247)
Q Consensus 73 g~C~C~~g~~G~~C~~ 88 (247)
..|.|+++|+|.+|+.
T Consensus 19 ~~C~Cp~g~~G~~Ce~ 34 (122)
T 2fd6_A 19 HWCNCPKKFGGQHCEI 34 (122)
T ss_dssp EEEECCTTEESTTSCE
T ss_pred CCccCCCCCCCccccc
Confidence 4899999999999984
No 104
>3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F*
Probab=68.69 E-value=1.3 Score=33.74 Aligned_cols=10 Identities=10% Similarity=0.112 Sum_probs=5.0
Q ss_pred CCCCCCCCCc
Q psy15472 37 NCEKCRDNYY 46 (247)
Q Consensus 37 ~Ce~C~~Gy~ 46 (247)
-|.+|+||+|
T Consensus 43 CC~~CppG~~ 52 (156)
T 3tje_F 43 CHKPCPPGER 52 (156)
T ss_dssp CSSCBCTTEE
T ss_pred ECCCCCCCCe
Confidence 3445555554
No 105
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D
Probab=67.46 E-value=1.2 Score=34.56 Aligned_cols=60 Identities=22% Similarity=0.525 Sum_probs=34.2
Q ss_pred CeeccCCCCCCC---------CCCCCCCCCCCccCC--CCCCCcCCC--CCCCCCCCcCCCC--CceeeCCCCCc
Q psy15472 23 GGHCLDCQGDRD---------GPNCEKCRDNYYQKS--GDNFCTACN--CNPIGSLNLQCNS--EGRCQCKPGVT 82 (247)
Q Consensus 23 ~g~C~~C~~~~~---------G~~Ce~C~~Gy~g~~--~~~~C~~C~--C~~~g~~~~~c~~--~g~C~C~~g~~ 82 (247)
..-|..|++|+. ...|..|++|+|-.. ....|++|. |...-.....|.. .-+|.|++||.
T Consensus 19 ~~cC~~CppG~~~~~~Ct~~~~t~C~pC~~gtY~~~~n~~~~C~~C~~~C~~~~~~~~~Ct~tsdtvC~C~~G~~ 93 (176)
T 3k51_B 19 RLVCAQCPPGTFVQRPCRRDSPTTCGPCPPRHYTQFWNYLERCRYCNVLCGEREEEARACHATHNRACRCRTGFF 93 (176)
T ss_dssp EEEEECBCTTEEEEECCCSSSCCEEEECCTTEECCSCBCCSSCEECCCCCCSSEEEEECCBTTBCCEEEECTTEE
T ss_pred CCCCCCCCCCceeCccCCCCCCCccccCCCCCeecCCCCCCcCccccCcCCCCCEEeccCcCCCCceeeccCCee
Confidence 334556776664 346777888887653 345687775 5421111123443 56677777765
No 106
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D
Probab=65.85 E-value=1.3 Score=34.33 Aligned_cols=47 Identities=21% Similarity=0.647 Sum_probs=26.9
Q ss_pred CCCCCCCCCcccCC---CCCCccCC--CCCCCCCCCCCCCCCCCC-eeeCCCCCC
Q psy15472 193 DKCDRCDVNHYDFG---EAGCKSCE--CNPAGSVKNTPNCDSVKG-QCECKDNVE 241 (247)
Q Consensus 193 ~~C~~C~~g~~g~~---~~~C~~C~--C~~~g~~~~~~~C~~~tG-~C~C~~g~~ 241 (247)
..|..|++|+|-.. ...|++|. |..+-.+ ...|..... +|.|++||.
T Consensus 41 t~C~pC~~gtY~~~~n~~~~C~~C~~~C~~~~~~--~~~Ct~tsdtvC~C~~G~~ 93 (176)
T 3k51_B 41 TTCGPCPPRHYTQFWNYLERCRYCNVLCGEREEE--ARACHATHNRACRCRTGFF 93 (176)
T ss_dssp CEEEECCTTEECCSCBCCSSCEECCCCCCSSEEE--EECCBTTBCCEEEECTTEE
T ss_pred CccccCCCCCeecCCCCCCcCccccCcCCCCCEE--eccCcCCCCceeeccCCee
Confidence 45666888877543 34688875 6532111 234554433 688888764
No 107
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=64.30 E-value=2 Score=28.75 Aligned_cols=15 Identities=27% Similarity=0.904 Sum_probs=13.6
Q ss_pred eeeCCCCCCCCCCCC
Q psy15472 233 QCECKDNVEGAQCRS 247 (247)
Q Consensus 233 ~C~C~~g~~G~~C~~ 247 (247)
.|.|.+||+|.+|+.
T Consensus 63 ~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 63 SCICHPGYHGERCHG 77 (79)
T ss_dssp CEEECTTEESTTCCE
T ss_pred EEEcCCCcccccccc
Confidence 699999999999973
No 108
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=64.09 E-value=2.4 Score=39.29 Aligned_cols=37 Identities=24% Similarity=0.590 Sum_probs=25.7
Q ss_pred CCCcCCCCCCCCCCCcCCCCCceeeCC-CCCcCCCCCC
Q psy15472 52 NFCTACNCNPIGSLNLQCNSEGRCQCK-PGVTGDKCDR 88 (247)
Q Consensus 52 ~~C~~C~C~~~g~~~~~c~~~g~C~C~-~g~~G~~C~~ 88 (247)
+.|.+-+|.+.|++...-...+.|.|+ +||+|.+|+.
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 457667777766432111136899999 9999999984
No 109
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=63.47 E-value=4.2 Score=35.40 Aligned_cols=44 Identities=23% Similarity=0.793 Sum_probs=27.4
Q ss_pred cccCCCCcc---cCCCCCCCCCcccCCCCCCc-cCCCCCCCCCCCCCCCCCCCC--eeeCCCCCCCC
Q psy15472 183 RCQCKPGVT---GDKCDRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKG--QCECKDNVEGA 243 (247)
Q Consensus 183 ~C~C~~g~~---G~~C~~C~~g~~g~~~~~C~-~C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~ 243 (247)
.|.|++||. |..|+. .+.|. +..|.. .|....| +|.|++||.+.
T Consensus 22 ~C~C~~G~~~~~~~~C~d---------ideC~~~~~C~~--------~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 22 ECLCPDGFQLVAQRRCED---------IDECQDPDTCSQ--------LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp EEECCTTEEECSSSCEEE---------CCCCSTTSSCSS--------CCBCCSSSCBCCCCTTCCCC
T ss_pred EEECCCCCCcCCCCcccC---------chhhhccCCCCC--------ccCCCccceeeecccccccc
Confidence 899999998 777731 22332 122332 3544333 89999999864
No 110
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=62.30 E-value=2.5 Score=28.30 Aligned_cols=17 Identities=35% Similarity=1.089 Sum_probs=14.7
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
...|.|.+||+|.+|+.
T Consensus 61 ~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 61 APSCICHPGYHGERCHG 77 (79)
T ss_dssp BCCEEECTTEESTTCCE
T ss_pred CeEEEcCCCcccccccc
Confidence 46799999999999973
No 111
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=61.60 E-value=2 Score=37.27 Aligned_cols=47 Identities=30% Similarity=0.868 Sum_probs=13.9
Q ss_pred cccCCCCcc----cCCCCCCCCCcccCCCCCCc-cCCCCCCCCCCCCCCCCCCCC--eeeCCCCCC----CCCCC
Q psy15472 183 RCQCKPGVT----GDKCDRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKG--QCECKDNVE----GAQCR 246 (247)
Q Consensus 183 ~C~C~~g~~----G~~C~~C~~g~~g~~~~~C~-~C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~----G~~C~ 246 (247)
.|.|++||. |..|.. .+.|. .-.|.+ .|....| +|.|++||+ |..|.
T Consensus 25 ~C~C~~G~~l~~~~~~C~d---------~~eC~~~~~C~~--------~C~~~~g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 25 QCTCHTGYRLTEDGRTCQD---------VNECAEEGYCSQ--------GCTNSEGAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp ------------------------------------CCTT--------EEC-----CCEECCTTEEECTTSSCEE
T ss_pred EeECCCCceECCCCCccCc---------cceeCCcCcccC--------cCCCCCCCCeEEECCCceEcCCCCeEC
Confidence 899999998 888832 12221 112322 1443333 899999998 77773
No 112
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=60.74 E-value=4.4 Score=30.28 Aligned_cols=33 Identities=21% Similarity=0.557 Sum_probs=21.5
Q ss_pred CCCCCCCCCCCcC--CCCCceeeCCCCCcCCCCCC
Q psy15472 56 ACNCNPIGSLNLQ--CNSEGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 56 ~C~C~~~g~~~~~--c~~~g~C~C~~g~~G~~C~~ 88 (247)
.|+|.+.|+.... ......|.|++||.|.+|+.
T Consensus 12 ~cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei 46 (145)
T 2i9a_A 12 NCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI 46 (145)
T ss_dssp CCCCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred CCCCCCCCCcCCCccccCCccccCCCCCCCCceec
Confidence 3567776643211 11234899999999999973
No 113
>3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B
Probab=60.70 E-value=2.1 Score=34.36 Aligned_cols=48 Identities=19% Similarity=0.428 Sum_probs=26.2
Q ss_pred cCCCCCCCCCcccCC---CCCCccCC-CCCC-CCCCCCCCCCCCCC-eeeCCCCC
Q psy15472 192 GDKCDRCDVNHYDFG---EAGCKSCE-CNPA-GSVKNTPNCDSVKG-QCECKDNV 240 (247)
Q Consensus 192 G~~C~~C~~g~~g~~---~~~C~~C~-C~~~-g~~~~~~~C~~~tG-~C~C~~g~ 240 (247)
...|..|++|+|-.. ...|++|. |+.+ +.+ ....|...+. +|.|++||
T Consensus 64 ~t~C~pC~~gtY~~~~n~~~~C~~C~~C~~~~~~~-~~~~Ct~t~dtvC~C~~G~ 117 (216)
T 3me4_A 64 DSVCLPCGPDEYLDTWNEEDKCLLHKVCDAGKALV-AVDPGNHTAPRRCACTAGY 117 (216)
T ss_dssp CCEEEECCTTEECCSSBCCSSCEECCCCCGGGTEE-EESTTCSSSCCEEEECTTE
T ss_pred CCccccCCCCCeecCCCCCCcCCCCCCCCCCcCeE-EEecCCCCCCccccCCCCe
Confidence 345666888877643 34577664 5543 111 1234554333 67888875
No 114
>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A
Probab=58.27 E-value=3.1 Score=35.33 Aligned_cols=48 Identities=19% Similarity=0.501 Sum_probs=27.9
Q ss_pred cCCCCCCCCCcccCC---CCCCccCC--CCCCCCCCCCCCCCCCCC-eeeCCCCCC
Q psy15472 192 GDKCDRCDVNHYDFG---EAGCKSCE--CNPAGSVKNTPNCDSVKG-QCECKDNVE 241 (247)
Q Consensus 192 G~~C~~C~~g~~g~~---~~~C~~C~--C~~~g~~~~~~~C~~~tG-~C~C~~g~~ 241 (247)
...|..|++|+|-.. ...|++|. |..+-.+ ...|..... +|.|++||.
T Consensus 44 dt~C~pCp~GtYt~~~N~~~~C~~C~~~C~~g~~~--~~~CT~TsDtvC~C~~G~y 97 (313)
T 3u3p_A 44 LRVCSSCPVGTFTRHENGIEKCHDCSQPCPWPMIE--KLPCAALTDRECTCPPGMF 97 (313)
T ss_dssp CCEEEECCTTEECCSCBCCSSCEECCCCCCTTCEE--EECSBTTBCCEEECCTTEE
T ss_pred CCccccCCCCceeccCCCCCcCcccccccCCCCEE--ecCCcCCCCccccCCCCce
Confidence 345667888776543 35688876 7643211 234554333 688888764
No 115
>1ext_A Tumor necrosis factor receptor; binding protein, cytokine, signalling protein; 1.85A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1ft4_A* 1ncf_A 1tnr_R
Probab=58.26 E-value=3.2 Score=31.61 Aligned_cols=47 Identities=21% Similarity=0.716 Sum_probs=25.8
Q ss_pred CCCCCCCCCCccCC--CCCCCcCCC-CCC-CCCC-CcCCCC--CceeeCCCCCc
Q psy15472 36 PNCEKCRDNYYQKS--GDNFCTACN-CNP-IGSL-NLQCNS--EGRCQCKPGVT 82 (247)
Q Consensus 36 ~~Ce~C~~Gy~g~~--~~~~C~~C~-C~~-~g~~-~~~c~~--~g~C~C~~g~~ 82 (247)
..|..|++|+|-+. ....|++|. |.. .+.. ...|.. .-+|.|++||.
T Consensus 40 t~C~~C~~gty~~~~n~~~~C~~C~~C~~~~~~~~~~~Ct~t~dt~C~C~~G~y 93 (162)
T 1ext_A 40 TDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQY 93 (162)
T ss_dssp CEEEECCTTEECCSSBCCSSCEECCCCCGGGTCEEEECCBTTBCCEEECCTTEE
T ss_pred cccccCCCCccccccCCCCcccccCCCCCCCCEEEEecccCCCCCCccCCCCce
Confidence 35777888887664 234577765 542 1211 123332 45677777665
No 116
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=58.20 E-value=3.3 Score=38.14 Aligned_cols=37 Identities=24% Similarity=0.480 Sum_probs=26.9
Q ss_pred CCCcCCCCCCCCCCCcCCCCCceeeCC-CCCcCCCCCC
Q psy15472 52 NFCTACNCNPIGSLNLQCNSEGRCQCK-PGVTGDKCDR 88 (247)
Q Consensus 52 ~~C~~C~C~~~g~~~~~c~~~g~C~C~-~g~~G~~C~~ 88 (247)
+.|.+-+|.+.|++...-...+.|.|+ +||+|.+|+.
T Consensus 3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 457777787776543212237899999 9999999984
No 117
>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}
Probab=57.32 E-value=5.2 Score=30.87 Aligned_cols=57 Identities=23% Similarity=0.647 Sum_probs=28.9
Q ss_pred ccCCCCCCC---------CCCCCCCCCCCccCC--CCCCCcCCC-CCCC-CC-CCcCCCC--CceeeCCCCCc
Q psy15472 26 CLDCQGDRD---------GPNCEKCRDNYYQKS--GDNFCTACN-CNPI-GS-LNLQCNS--EGRCQCKPGVT 82 (247)
Q Consensus 26 C~~C~~~~~---------G~~Ce~C~~Gy~g~~--~~~~C~~C~-C~~~-g~-~~~~c~~--~g~C~C~~g~~ 82 (247)
|..|++|+. ...|..|++|+|-.. ....|++|. |... +. ....|.. .-+|.|++||.
T Consensus 18 C~~CppG~~~~~~C~~~~~t~C~pC~~gty~~~~n~~~~C~~C~~C~~~~g~~~~~~Ct~t~d~~C~C~~G~~ 90 (177)
T 3qd6_R 18 CSLCQPGQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWH 90 (177)
T ss_dssp ECCBCTTBCCCBCCCSSCCCBCCBCCSSEECCSSBCCSSCEECCCCCGGGTEEEEECCCTTSCCEEEECTTEE
T ss_pred CCCCCCCCEeccCCCCCCCCccccCCCCceecCCCCCCcCCCCCcCCCcCCeEEecCCcCCCCceeecCCCcE
Confidence 556666653 235666778776553 234566654 4321 11 1112332 45566666654
No 118
>1du3_A Death receptor 5; trail, DR5, complex; 2.20A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1d0g_R 2h9g_R 1za3_R 1d4v_A
Probab=57.31 E-value=4.2 Score=29.75 Aligned_cols=24 Identities=17% Similarity=0.283 Sum_probs=12.1
Q ss_pred eeccCCCCCCCC----CCCCCCCCC-Ccc
Q psy15472 24 GHCLDCQGDRDG----PNCEKCRDN-YYQ 47 (247)
Q Consensus 24 g~C~~C~~~~~G----~~Ce~C~~G-y~g 47 (247)
.-|..|++|+.= ..|..|++| +|-
T Consensus 23 ~~C~~CppG~~~~~~~t~C~pC~~g~ty~ 51 (130)
T 1du3_A 23 PSEGLCPPGHHISEDGRDCISCKYGQDYS 51 (130)
T ss_dssp CBTTBBCTTEEECSSSSCEEECCTTTEEC
T ss_pred CccCCCCCCceecCCCCcCccCCCcCEEe
Confidence 345556665531 235556666 443
No 119
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=57.09 E-value=1.3 Score=41.86 Aligned_cols=26 Identities=35% Similarity=0.824 Sum_probs=19.8
Q ss_pred CCCCCCCCCcCCCCCceeeCCCCCcCCCCCC
Q psy15472 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 58 ~C~~~g~~~~~c~~~g~C~C~~g~~G~~C~~ 88 (247)
.|.++| .|.. |+|+|.+||.|..|++
T Consensus 540 ~C~ghG----~C~~-G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 540 MCSGHG----RCVQ-GSCVCDEQWGGLYCDE 565 (725)
T ss_dssp GGGGSE----EEET-TEEEECTTEESTTSCE
T ss_pred ccCCCc----EECC-CCEeeCCCccCCCcCc
Confidence 455555 4544 8999999999999973
No 120
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=56.15 E-value=2.1 Score=32.05 Aligned_cols=14 Identities=29% Similarity=0.921 Sum_probs=13.4
Q ss_pred eeeCCCCCCCCCCC
Q psy15472 233 QCECKDNVEGAQCR 246 (247)
Q Consensus 233 ~C~C~~g~~G~~C~ 246 (247)
+|.|++||+|..|+
T Consensus 141 ~c~C~~g~~G~~Ce 154 (162)
T 1g1s_A 141 TCSCYPGFYGPECE 154 (162)
T ss_dssp EEEECTTEESTTSC
T ss_pred eEeCCCCCcCcccc
Confidence 89999999999997
No 121
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=52.54 E-value=7.2 Score=33.85 Aligned_cols=13 Identities=38% Similarity=0.802 Sum_probs=11.4
Q ss_pred CceeeCCCCCcCC
Q psy15472 72 EGRCQCKPGVTGD 84 (247)
Q Consensus 72 ~g~C~C~~g~~G~ 84 (247)
++.|.|++||++.
T Consensus 59 ~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 59 GYKCQCEEGFQLD 71 (400)
T ss_dssp SCBCCCCTTCCCC
T ss_pred ceeeecccccccc
Confidence 6899999999875
No 122
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=52.00 E-value=4.8 Score=30.02 Aligned_cols=17 Identities=35% Similarity=0.974 Sum_probs=15.1
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
...|+|++||+|.+||.
T Consensus 139 ~~~c~C~~g~~G~~Ce~ 155 (162)
T 1g1s_A 139 NYTCSCYPGFYGPECEY 155 (162)
T ss_dssp SEEEEECTTEESTTSCE
T ss_pred CceEeCCCCCcCccccc
Confidence 68899999999999973
No 123
>3alq_R Tumor necrosis factor receptor superfamily member; ligand-receptor complex, cytokine, cytokine-cytokine recepto; 3.00A {Homo sapiens}
Probab=51.33 E-value=4.1 Score=31.27 Aligned_cols=34 Identities=24% Similarity=0.660 Sum_probs=19.7
Q ss_pred eccCCCCCCC---------CCCCCCCCCCCccCCC--CCCCcCCC
Q psy15472 25 HCLDCQGDRD---------GPNCEKCRDNYYQKSG--DNFCTACN 58 (247)
Q Consensus 25 ~C~~C~~~~~---------G~~Ce~C~~Gy~g~~~--~~~C~~C~ 58 (247)
-|..|++|+. ...|..|++|+|-+.. ...|++|.
T Consensus 21 cC~~C~pG~~~~~~C~~~~~t~C~~C~~gty~~~~n~~~~C~~C~ 65 (173)
T 3alq_R 21 CCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCG 65 (173)
T ss_dssp EEECBCTTEEEEECCCSSCCCEEEECCTTEECCSSBCCSSCEECC
T ss_pred CCCCCCCCCeecccCCCCCCCcCCcCCCCccccCCCCCCccCCCC
Confidence 4556666642 3356678888776542 23576664
No 124
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=47.28 E-value=4.6 Score=34.89 Aligned_cols=16 Identities=25% Similarity=0.715 Sum_probs=13.3
Q ss_pred CceeeCCCCCc----CCCCC
Q psy15472 72 EGRCQCKPGVT----GDKCD 87 (247)
Q Consensus 72 ~g~C~C~~g~~----G~~C~ 87 (247)
+++|.|++||+ |..|+
T Consensus 63 ~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 63 AFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp -CCEECCTTEEECTTSSCEE
T ss_pred CCeEEECCCceEcCCCCeEC
Confidence 68999999998 78885
No 125
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=42.52 E-value=8.7 Score=34.51 Aligned_cols=33 Identities=30% Similarity=0.841 Sum_probs=16.7
Q ss_pred CCCCCCCCCCCCCCCCCCC-----CeeeCCCCCCCCCCC
Q psy15472 213 CECNPAGSVKNTPNCDSVK-----GQCECKDNVEGAQCR 246 (247)
Q Consensus 213 C~C~~~g~~~~~~~C~~~t-----G~C~C~~g~~G~~C~ 246 (247)
|+|...... ++..|+... |.|.|.+||.|+.||
T Consensus 435 C~C~~~~~~-~s~~C~~g~G~~~CG~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 435 CACQAQAEP-NSHRCNNGNGTFECGVCRCGPGWLGSQCE 472 (472)
T ss_dssp CGGGGGCBT-TCTTTTTTTEEEETTEEEECTTC------
T ss_pred CCCCCCCCC-CCcccCCCCeeEeCCceECcCCCCCCCCC
Confidence 666543222 345676333 578999999999996
No 126
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=42.27 E-value=7.5 Score=32.45 Aligned_cols=16 Identities=31% Similarity=0.858 Sum_probs=14.1
Q ss_pred CCeeeCCCCCCCCCCC
Q psy15472 231 KGQCECKDNVEGAQCR 246 (247)
Q Consensus 231 tG~C~C~~g~~G~~C~ 246 (247)
-|+|.|.+||.|+.|+
T Consensus 206 CG~C~C~~g~~G~~Ce 221 (280)
T 2p26_A 206 CGICRCDTGYIGKNCE 221 (280)
T ss_dssp TTEEEECTTEESTTSC
T ss_pred CCceeCCCCCcCCcce
Confidence 3689999999999996
No 127
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=41.99 E-value=8.7 Score=28.59 Aligned_cols=17 Identities=29% Similarity=0.770 Sum_probs=15.1
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
.+.|.|.+||+|..|+.
T Consensus 139 ~~~c~C~~g~~g~~C~~ 155 (164)
T 3cfw_A 139 NYTCNCDVGYYGPQCQF 155 (164)
T ss_dssp EEEEEECTTCBSSSSCB
T ss_pred CceeeeCCCcccccccc
Confidence 68899999999999974
No 128
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=40.84 E-value=44 Score=31.31 Aligned_cols=44 Identities=27% Similarity=0.640 Sum_probs=24.6
Q ss_pred CCCCCCCCCCCCcc---CC--CCCCCc-CCCCCCCCCCCcCCCC---CceeeCCCCCcCC
Q psy15472 34 DGPNCEKCRDNYYQ---KS--GDNFCT-ACNCNPIGSLNLQCNS---EGRCQCKPGVTGD 84 (247)
Q Consensus 34 ~G~~Ce~C~~Gy~g---~~--~~~~C~-~C~C~~~g~~~~~c~~---~g~C~C~~g~~G~ 84 (247)
.+..| .|++||.+ .. ..++|. +-.| ...|.. ++.|.|++||++.
T Consensus 313 ~~~~C-~C~~G~~~~~~~~C~dideC~~~~~C------~~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 313 IGYEC-LCPDGFQLVAQRRCEDIDECQDPDTC------SQLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp TCCCC-CCCSSSCCCSSSCCCCCCCCSSSSSC------TTTCCBCSSCBCCCCCSSCBCC
T ss_pred CCcEE-eCCCCeEcCCCCcccCccccCCCCcc------ccccccCCCCeeeeeecccccC
Confidence 34455 57888874 22 233443 1122 224543 6889999999863
No 129
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=40.77 E-value=41 Score=31.46 Aligned_cols=16 Identities=25% Similarity=0.978 Sum_probs=11.6
Q ss_pred CCCCCC--eeeCCCCCCC
Q psy15472 227 CDSVKG--QCECKDNVEG 242 (247)
Q Consensus 227 C~~~tG--~C~C~~g~~G 242 (247)
|....| +|.|++||++
T Consensus 347 C~n~~g~y~C~C~~G~~~ 364 (699)
T 1n7d_A 347 CVNLEGGYKCQCEEGFQL 364 (699)
T ss_dssp CCBCSSCBCCCCCSSCBC
T ss_pred cccCCCCeeeeeeccccc
Confidence 544333 8999999986
No 130
>1mox_A Epidermal growth factor receptor; EGFR, receptor, complex, transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1
Probab=36.32 E-value=17 Score=32.96 Aligned_cols=7 Identities=29% Similarity=1.151 Sum_probs=4.0
Q ss_pred CCCCccc
Q psy15472 198 CDVNHYD 204 (247)
Q Consensus 198 C~~g~~g 204 (247)
|++|||.
T Consensus 287 Cp~G~y~ 293 (501)
T 1mox_A 287 CGADSYE 293 (501)
T ss_dssp CCSSCCC
T ss_pred CCCCCee
Confidence 5666554
No 131
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=28.61 E-value=16 Score=32.81 Aligned_cols=34 Identities=35% Similarity=0.987 Sum_probs=16.6
Q ss_pred CCcCCCCCCCCC-CCcCCC-C-----CceeeCCCCCcCCCCC
Q psy15472 53 FCTACNCNPIGS-LNLQCN-S-----EGRCQCKPGVTGDKCD 87 (247)
Q Consensus 53 ~C~~C~C~~~g~-~~~~c~-~-----~g~C~C~~g~~G~~C~ 87 (247)
.|. |.|..... .+..|. . =|.|.|.+||.|..||
T Consensus 432 ~C~-C~C~~~~~~~s~~C~~g~G~~~CG~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 432 DCD-CACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCE 472 (472)
T ss_dssp CCS-CGGGGGCBTTCTTTTTTTEEEETTEEEECTTC------
T ss_pred ccc-CCCCCCCCCCCcccCCCCeeEeCCceECcCCCCCCCCC
Confidence 454 66643221 234575 2 2789999999999986
No 132
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=28.09 E-value=12 Score=33.77 Aligned_cols=32 Identities=28% Similarity=0.814 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCC-----CCeeeCCCCCCCCCCC
Q psy15472 213 CECNPAGSVKNTPNCDSV-----KGQCECKDNVEGAQCR 246 (247)
Q Consensus 213 C~C~~~g~~~~~~~C~~~-----tG~C~C~~g~~G~~C~ 246 (247)
|+|... ..+...|+.. =|.|.|.+||.|+.|+
T Consensus 457 C~C~~~--~~~s~~C~~g~G~~~CG~C~C~~G~~G~~Ce 493 (503)
T 3v4v_B 457 CNCSDT--QPQAPHCSDGQGHLQCGVCSCAPGRLGRLCE 493 (503)
T ss_dssp ---------------------------------------
T ss_pred CCCCCC--CCCCcccCCCCeeEeCCceECcCCCcCCCCC
Confidence 666532 1234567522 2578999999999996
No 133
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=27.62 E-value=20 Score=26.27 Aligned_cols=17 Identities=41% Similarity=1.155 Sum_probs=14.9
Q ss_pred CceeeCCCCCcCCCCCC
Q psy15472 72 EGRCQCKPGVTGDKCDR 88 (247)
Q Consensus 72 ~g~C~C~~g~~G~~C~~ 88 (247)
...|.|.+||+|.+||.
T Consensus 139 ~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 139 NYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp EEEEEECTTEESTTSCE
T ss_pred CeeEECCCCccCccccc
Confidence 67899999999999973
No 134
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=25.06 E-value=15 Score=33.20 Aligned_cols=15 Identities=47% Similarity=1.258 Sum_probs=0.0
Q ss_pred ccccCCCCcccCCCC
Q psy15472 182 GRCQCKPGVTGDKCD 196 (247)
Q Consensus 182 G~C~C~~g~~G~~C~ 196 (247)
|.|.|.+||.|+.|+
T Consensus 479 G~C~C~~G~~G~~Ce 493 (503)
T 3v4v_B 479 GVCSCAPGRLGRLCE 493 (503)
T ss_dssp ---------------
T ss_pred CceECcCCCcCCCCC
Confidence 789999999999994
No 135
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=20.40 E-value=44 Score=31.96 Aligned_cols=44 Identities=23% Similarity=0.810 Sum_probs=0.0
Q ss_pred cccCCCCcc---cCCCCCCCCCcccCCCCCCc-cCCCCCCCCCCCCCCCCCCCC--eeeCCCCCCCC
Q psy15472 183 RCQCKPGVT---GDKCDRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKG--QCECKDNVEGA 243 (247)
Q Consensus 183 ~C~C~~g~~---G~~C~~C~~g~~g~~~~~C~-~C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~ 243 (247)
.|.|++||. |..|+ ..+.|. +..|... |....| +|.|++||...
T Consensus 334 ~C~C~~Gy~l~~g~~C~---------dideC~~~~~C~~~--------C~n~~gsy~C~C~~Gy~l~ 383 (791)
T 3m0c_C 334 ECLCPDGFQLVAQRRCE---------DIDECQDPDTCSQL--------CVNLEGGYKCQCEEGFQLD 383 (791)
T ss_dssp EEECCTTCEEETTTEEE---------CCCCCSSSSSCTTT--------CCBCSSCBCCCCCSSEECC
T ss_pred ccCCCCCCccCCCCccc---------cCcccCCCCCCCCe--------eecCCCCceeecCCCCEeC
Done!