Your job contains 1 sequence.
>psy15472
CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN
PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS
VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS
EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV
EGAQCRS
The BLAST search returned 16 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15472
(247 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0002528 - symbol:LanB2 "Laminin B2" species:7227 "... 511 1.5e-47 1
WB|WBGene00016913 - symbol:lam-2 species:6239 "Caenorhabd... 470 3.4e-43 1
ZFIN|ZDB-GENE-021226-3 - symbol:lamc1 "laminin, gamma 1" ... 445 1.5e-40 1
UNIPROTKB|F1S663 - symbol:LAMC1 "Uncharacterized protein"... 444 2.0e-40 1
UNIPROTKB|F1PHK9 - symbol:LAMC1 "Uncharacterized protein"... 435 1.6e-39 1
UNIPROTKB|F1NI05 - symbol:LAMC1 "Uncharacterized protein"... 427 5.3e-39 1
UNIPROTKB|F1NK49 - symbol:LAMC1 "Uncharacterized protein"... 427 1.3e-38 1
UNIPROTKB|F1S0X0 - symbol:LAMC3 "Uncharacterized protein"... 376 1.9e-38 2
UNIPROTKB|F1MD77 - symbol:LAMC1 "Uncharacterized protein"... 424 2.7e-38 1
UNIPROTKB|F1N0T1 - symbol:Bt.54919 "Uncharacterized prote... 367 3.2e-38 2
UNIPROTKB|P11047 - symbol:LAMC1 "Laminin subunit gamma-1"... 422 4.4e-38 1
MGI|MGI:1344394 - symbol:Lamc3 "laminin gamma 3" species:... 379 1.3e-37 2
UNIPROTKB|F1MAA7 - symbol:Lamc1 "Protein Lamc1" species:1... 415 2.4e-37 1
MGI|MGI:99914 - symbol:Lamc1 "laminin, gamma 1" species:1... 403 4.6e-36 1
UNIPROTKB|A4D0S4 - symbol:LAMB4 "Laminin subunit beta-4" ... 291 7.0e-36 2
MGI|MGI:1918264 - symbol:Megf9 "multiple EGF-like-domains... 380 1.0e-34 1
WB|WBGene00002248 - symbol:lam-3 species:6239 "Caenorhabd... 387 5.6e-34 1
UNIPROTKB|O75445 - symbol:USH2A "Usherin" species:9606 "H... 386 1.3e-33 1
MGI|MGI:1341292 - symbol:Ush2a "Usher syndrome 2A (autoso... 385 1.6e-33 1
UNIPROTKB|F1NZ77 - symbol:USH2A "Uncharacterized protein"... 385 1.7e-33 1
UNIPROTKB|Q9H1U4 - symbol:MEGF9 "Multiple epidermal growt... 369 1.8e-33 1
ZFIN|ZDB-GENE-060503-794 - symbol:ush2a "Usher syndrome 2... 379 7.2e-33 1
UNIPROTKB|F1NLU4 - symbol:LAMB3 "Uncharacterized protein"... 370 9.1e-33 1
RGD|628777 - symbol:Ush2a "Usher syndrome 2A (autosomal r... 371 1.1e-32 1
UNIPROTKB|P24043 - symbol:LAMA2 "Laminin subunit alpha-2"... 337 2.8e-32 2
UNIPROTKB|E1BP05 - symbol:USH2A "Uncharacterized protein"... 372 4.0e-32 1
FB|FBgn0002526 - symbol:LanA "Laminin A" species:7227 "Dr... 318 4.2e-32 2
ZFIN|ZDB-GENE-021226-2 - symbol:lamb4 "laminin, beta 4" s... 316 5.0e-32 2
RGD|1309399 - symbol:Lamc3 "laminin gamma 3" species:1011... 363 8.2e-32 1
UNIPROTKB|Q9Y6N6 - symbol:LAMC3 "Laminin subunit gamma-3"... 358 2.8e-31 1
ZFIN|ZDB-GENE-060118-1 - symbol:lama1 "laminin, alpha 1" ... 357 8.5e-31 1
UNIPROTKB|F1NCH8 - symbol:F1NCH8 "Uncharacterized protein... 352 1.1e-30 1
UNIPROTKB|E1BDK6 - symbol:LAMB2 "Uncharacterized protein"... 274 1.1e-30 2
UNIPROTKB|F1PEZ5 - symbol:LAMA2 "Uncharacterized protein"... 352 2.9e-30 1
UNIPROTKB|F1PVY5 - symbol:LAMA2 "Uncharacterized protein"... 352 2.9e-30 1
ZFIN|ZDB-GENE-060119-1 - symbol:lama2 "laminin, alpha 2" ... 351 3.7e-30 1
UNIPROTKB|F1P420 - symbol:LAMA2 "Uncharacterized protein"... 349 6.0e-30 1
UNIPROTKB|E1BXK1 - symbol:LAMC2 "Uncharacterized protein"... 333 8.3e-29 1
UNIPROTKB|Q13753 - symbol:LAMC2 "Laminin subunit gamma-2"... 333 8.5e-29 1
RGD|1308889 - symbol:Lama2 "laminin, alpha 2" species:101... 338 8.9e-29 1
UNIPROTKB|F1MMT2 - symbol:LAMA2 "Uncharacterized protein"... 337 1.1e-28 1
UNIPROTKB|F1PFM5 - symbol:LAMB3 "Uncharacterized protein"... 330 1.7e-28 1
UNIPROTKB|Q16787 - symbol:LAMA3 "Laminin subunit alpha-3"... 335 2.0e-28 1
UNIPROTKB|E1B7Q3 - symbol:LAMC2 "Uncharacterized protein"... 329 2.3e-28 1
MGI|MGI:99912 - symbol:Lama2 "laminin, alpha 2" species:1... 331 4.9e-28 1
UNIPROTKB|F1NJ23 - symbol:LAMB1 "Laminin subunit beta-1" ... 274 5.0e-28 2
UNIPROTKB|P07942 - symbol:LAMB1 "Laminin subunit beta-1" ... 281 8.0e-28 2
MGI|MGI:99913 - symbol:Lamc2 "laminin, gamma 2" species:1... 323 9.9e-28 1
WB|WBGene00001328 - symbol:epi-1 species:6239 "Caenorhabd... 327 1.6e-27 1
UNIPROTKB|F1LRH4 - symbol:Lamc2 "Protein Lamc2" species:1... 321 1.6e-27 1
UNIPROTKB|F1M1L0 - symbol:RGD1565947 "Protein RGD1565947"... 280 2.2e-27 2
UNIPROTKB|Q13751 - symbol:LAMB3 "Laminin subunit beta-3" ... 319 2.6e-27 1
UNIPROTKB|F1MAN8 - symbol:Lama5 "Protein Lama5" species:1... 325 2.6e-27 1
UNIPROTKB|F1LU77 - symbol:F1LU77 "Uncharacterized protein... 323 3.6e-27 1
UNIPROTKB|E2RPP1 - symbol:LAMA3 "Uncharacterized protein"... 323 3.8e-27 1
UNIPROTKB|F1MMK1 - symbol:LAMB3 "Uncharacterized protein"... 317 4.2e-27 1
RGD|1565947 - symbol:Ntn4 "netrin 4" species:10116 "Rattu... 280 6.2e-27 2
ZFIN|ZDB-GENE-030131-9823 - symbol:lama5 "laminin, alpha ... 320 8.8e-27 1
MGI|MGI:99909 - symbol:Lama3 "laminin, alpha 3" species:1... 318 1.3e-26 1
UNIPROTKB|F1N8P9 - symbol:LAMA1 "Uncharacterized protein"... 316 1.9e-26 1
UNIPROTKB|F1NM47 - symbol:LAMA1 "Uncharacterized protein"... 316 1.9e-26 1
MGI|MGI:99892 - symbol:Lama1 "laminin, alpha 1" species:1... 316 1.9e-26 1
FB|FBgn0261563 - symbol:wb "wing blister" species:7227 "D... 316 2.1e-26 1
UNIPROTKB|F1NZZ2 - symbol:LAMA5 "Uncharacterized protein"... 312 2.8e-26 2
UNIPROTKB|F1SQR3 - symbol:NTN4 "Uncharacterized protein" ... 285 3.3e-26 2
MGI|MGI:105382 - symbol:Lama5 "laminin, alpha 5" species:... 314 3.9e-26 1
UNIPROTKB|E1C700 - symbol:LAMB2 "Uncharacterized protein"... 309 5.4e-26 1
FB|FBgn0261800 - symbol:LanB1 "LanB1" species:7227 "Droso... 309 5.5e-26 1
UNIPROTKB|E2QZY0 - symbol:NTN4 "Uncharacterized protein" ... 281 7.1e-26 2
UNIPROTKB|F1LPI5 - symbol:Lamb3 "Protein Lamb3" species:1... 305 8.0e-26 1
UNIPROTKB|F1SAE9 - symbol:LAMB1 "Uncharacterized protein"... 276 8.3e-26 2
MGI|MGI:1888978 - symbol:Ntn4 "netrin 4" species:10090 "M... 281 9.1e-26 2
UNIPROTKB|F1MNT4 - symbol:LAMB1 "Uncharacterized protein"... 277 1.1e-25 2
UNIPROTKB|P25391 - symbol:LAMA1 "Laminin subunit alpha-1"... 307 1.7e-25 1
RGD|1307207 - symbol:Lama1 "laminin, alpha 1" species:101... 306 2.2e-25 1
UNIPROTKB|F1MDD5 - symbol:Bt.12589 "Uncharacterized prote... 305 3.0e-25 1
UNIPROTKB|F1MC13 - symbol:LAMA5 "Uncharacterized protein"... 305 3.4e-25 1
RGD|1306311 - symbol:Lamb1 "laminin, beta 1" species:1011... 272 3.7e-25 2
MGI|MGI:96743 - symbol:Lamb1 "laminin B1" species:10090 "... 276 4.4e-25 2
UNIPROTKB|O15230 - symbol:LAMA5 "Laminin subunit alpha-5"... 303 5.7e-25 1
MGI|MGI:99915 - symbol:Lamb3 "laminin, beta 3" species:10... 297 5.7e-25 1
UNIPROTKB|A7MB18 - symbol:NTN4 "NTN4 protein" species:991... 271 8.7e-25 2
UNIPROTKB|F1PJ02 - symbol:LAMA1 "Uncharacterized protein"... 297 2.0e-24 1
UNIPROTKB|Q9HB63 - symbol:NTN4 "Netrin-4" species:9606 "H... 284 4.3e-24 1
UNIPROTKB|F1MEG3 - symbol:LAMA1 "Uncharacterized protein"... 277 8.5e-24 2
MGI|MGI:99916 - symbol:Lamb2 "laminin, beta 2" species:10... 287 1.2e-23 1
UNIPROTKB|F1P4C0 - symbol:NTN4 "Uncharacterized protein" ... 256 1.9e-23 2
ZFIN|ZDB-GENE-021226-1 - symbol:lamb1a "laminin, beta 1a"... 284 2.5e-23 1
WB|WBGene00002247 - symbol:lam-1 species:6239 "Caenorhabd... 284 2.5e-23 1
ZFIN|ZDB-GENE-081030-4 - symbol:lamb2 "laminin, beta 2 (l... 283 3.2e-23 1
UNIPROTKB|F1P4B9 - symbol:NTN4 "Uncharacterized protein" ... 259 5.0e-23 2
UNIPROTKB|F1SPT5 - symbol:LAMB2 "Uncharacterized protein"... 280 6.0e-23 1
UNIPROTKB|F1NQ51 - symbol:LAMA3 "Uncharacterized protein"... 279 1.8e-22 1
UNIPROTKB|E2R4J1 - symbol:LAMB2 "Uncharacterized protein"... 273 3.6e-22 2
RGD|2988 - symbol:Lamb2 "laminin, beta 2" species:10116 "... 273 3.7e-22 1
UNIPROTKB|F1N805 - symbol:LOC416036 "Uncharacterized prot... 245 9.1e-22 2
UNIPROTKB|P55268 - symbol:LAMB2 "Laminin subunit beta-2" ... 260 3.2e-21 2
ZFIN|ZDB-GENE-990415-169 - symbol:ntn1a "netrin 1a" speci... 255 5.4e-21 1
ZFIN|ZDB-GENE-040724-213 - symbol:lama4 "laminin, alpha 4... 262 5.8e-21 1
ZFIN|ZDB-GENE-050310-1 - symbol:ntn4 "netrin 4" species:7... 249 2.3e-20 1
WARNING: Descriptions of 365 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0002528 [details] [associations]
symbol:LanB2 "Laminin B2" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] EMBL:AE014296
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 OMA:DRCKENK KO:K05635 EMBL:M58417
EMBL:M25063 EMBL:BT021394 PIR:A31483 RefSeq:NP_524006.1
UniGene:Dm.2551 ProteinModelPortal:P15215 SMR:P15215 DIP:DIP-21994N
IntAct:P15215 MINT:MINT-810240 STRING:P15215 PaxDb:P15215
PRIDE:P15215 EnsemblMetazoa:FBtr0076382 GeneID:39118
KEGG:dme:Dmel_CG3322 CTD:39118 FlyBase:FBgn0002528
HOGENOM:HOG000264193 InParanoid:P15215 OrthoDB:EOG434TMX
PhylomeDB:P15215 GenomeRNAi:39118 NextBio:812009 Bgee:P15215
GermOnline:CG3322 Uniprot:P15215
Length = 1639
Score = 511 (184.9 bits), Expect = 1.5e-47, P = 1.5e-47
Identities = 78/125 (62%), Positives = 99/125 (79%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG +++CFFD L+NRTGHGGHCLDC+ +RDGPNCE+C++N+Y + D +C C C+
Sbjct: 359 CNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRD-DGYCVNCACD 417
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GS +LQCNS G+CQCKPGVTGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+
Sbjct: 418 PVGSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDT 477
Query: 121 VKGQC 125
G C
Sbjct: 478 ETGIC 482
Score = 330 (121.2 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 84/235 (35%), Positives = 111/235 (47%)
Query: 27 LDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGR----CQCKPGV 81
L+ GD + + + +Y S C CN S + G C+C+
Sbjct: 269 LNTFGDELFGDSQVLKSYFYAISDIAVGARCKCNGHASKCVPSTGMHGERTLVCECRHNT 328
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTEL 140
G CDRC + D S E N + NC+ + +C A L +R H
Sbjct: 329 DGPDCDRCLPLYNDLKWKRSTSTEVNECKAC----NCNGLADKCFFDANLFNRTG-HGGH 383
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG----------GSLNLQCNSEGRCQCKPGV 190
+ R+N D + RCK + Y G GS +LQCNS G+CQCKPGV
Sbjct: 384 CLDCRENRDGP-----NCERCKENFYMRDDGYCVNCACDPVGSRSLQCNSHGKCQCKPGV 438
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
TGDKCDRCD N+Y FG GC+ C C+ GS +NTP CD+ G C CK+NVEG +C
Sbjct: 439 TGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRC 493
Score = 306 (112.8 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 80/237 (33%), Positives = 111/237 (46%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKS----GD-NFCTACNCNPIGSLNL--QCN-SEGRC-Q 76
C +C G CE+C D ++ G+ C +C+CN N CN + G C +
Sbjct: 811 CTECPKGYFGSRCEQCSDGFFGDPTGLLGEVQTCKSCDCNGNVDPNAVGNCNRTTGECLK 870
Query: 77 CKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNTPN---CDSVKGQCESAQ 129
C G+ CD+C H+ C C C AG+ ++ + CD V GQC+ +
Sbjct: 871 CIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQ-CK 929
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKP 188
+ GR E + N +GN C D P+G S N C+ G+C C+P
Sbjct: 930 PNVIGRDCGECQ-PGYFNIR-SGN---GCENCLCD--PVG---SYNSTCDRYSGQCHCRP 979
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GV G +CD+C+ Y F GCK CEC+ +GS K CD GQC C DNVEG +C
Sbjct: 980 GVMGQRCDQCENYFYGFSSEGCKPCECDESGS-KGF-QCDQ-NGQCPCNDNVEGRRC 1033
Score = 291 (107.5 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 78/260 (30%), Positives = 116/260 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-GD--NFCTAC 57
C+C+G ++ C D E G C+ CQ + G NC++C +Y + G N C C
Sbjct: 744 CDCHGHADIC--DSET-------GRCI-CQHNTHGDNCDQCAKGFYGNALGGTPNDCKRC 793
Query: 58 NCNPIGSLNLQCNSEGR-C-QCKPGVTGDKCDRCDVNHYD-----FGEAG-CKSCECNPA 109
C G+ LQ N + C +C G G +C++C + GE CKSC+CN
Sbjct: 794 PCPNDGAC-LQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTGLLGEVQTCKSCDCNGN 852
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
NC+ G+C ++ G H + + DP RC Y G
Sbjct: 853 VDPNAVGNCNRTTGECLKCIHNTAGE-HCDQCLSGHFG-DPLALPHGRCDRCS--CYEAG 908
Query: 170 -HGGSLNL-QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 225
++ +C+ G+CQCKP V G C C +++ GC++C C+P GS +T
Sbjct: 909 TEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNST- 967
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD GQC C+ V G +C
Sbjct: 968 -CDRYSGQCHCRPGVMGQRC 986
Score = 254 (94.5 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 71/229 (31%), Positives = 100/229 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF------C 54
C+CNG + NRT G CL C + G +C++C ++ GD C
Sbjct: 847 CDCNGNVDPNAVGN--CNRTT--GECLKCIHNTAGEHCDQCLSGHF---GDPLALPHGRC 899
Query: 55 TACNCNPIGSLN-----LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECN 107
C+C G+ +C+ G+CQCKP V G C C +++ GC++C C+
Sbjct: 900 DRCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCD 959
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
P GS +T CD GQC R V + R +N+ G + C+ D
Sbjct: 960 PVGSYNST--CDRYSGQCHC-----RPGVMGQ-RCDQCENYF-YGFSSEGCKPCECD--- 1007
Query: 168 LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC-EC 215
GS QC+ G+C C V G +CDRC N YD GC C +C
Sbjct: 1008 --ESGSKGFQCDQNGQCPCNDNVEGRRCDRCKENKYD-RHRGCIDCPDC 1053
Score = 219 (82.2 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 68/232 (29%), Positives = 94/232 (40%)
Query: 35 GPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRC 89
G CE C Y G F C C+C+ G ++ C+SE GRC C+ GD CD+C
Sbjct: 718 GQFCESCAPGYRHSPARGGPFMPCIPCDCH--GHADI-CDSETGRCICQHNTHGDNCDQC 774
Query: 90 DVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
Y G CK C C G+ + +C SR Q
Sbjct: 775 AKGFYGNALGGTPNDCKRCPCPNDGACLQINEDTVICTECPKGYFGSRCE-------QCS 827
Query: 146 KNF--DPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRC-QCKPGVTGDKCDRCDV 200
F DP G + +++ CK D ++ CN + G C +C G+ CD+C
Sbjct: 828 DGFFGDPTG-LLGEVQTCKSCDCNGNVDPNAVG-NCNRTTGECLKCIHNTAGEHCDQCLS 885
Query: 201 NHYD----FGEAGCKSCECNPAGSVKNTPN---CDSVKGQCECKDNVEGAQC 245
H+ C C C AG+ ++ + CD V GQC+CK NV G C
Sbjct: 886 GHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDC 937
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 47/180 (26%), Positives = 67/180 (37%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
+C C G G C+ C + G C P + CDS G+C +
Sbjct: 709 QCTCPEGYLGQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRC-----ICQ 763
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRR-CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
H + Q K F GN + CKR P G L + ++ +C G G
Sbjct: 764 HNTHGDNCDQCAKGF--YGNALGGTPNDCKRCPCP-NDGACLQINEDTVICTECPKGYFG 820
Query: 193 DKCDRCDVNHYD-----FGEAG-CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+C++C + GE CKSC+CN NC+ G+C +C N G C
Sbjct: 821 SRCEQCSDGFFGDPTGLLGEVQTCKSCDCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHC 880
Score = 136 (52.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS-LNLQ-CNSE-GRCQCKPG 80
G C C+ G C++C +NYYQ G + C C C+ GS N C++E G C CK
Sbjct: 430 GKC-QCKPGVTGDKCDRCDNNYYQ-FGPHGCQQCGCDSGGSHQNTPACDTETGICFCKEN 487
Query: 81 VTGDKCDRCDVNHYDFGEA---GCKSCEC 106
V G +C+ C ++ + GC C C
Sbjct: 488 VEGRRCNECKPGFFNLDKNNRFGCTPCFC 516
>WB|WBGene00016913 [details] [associations]
symbol:lam-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] GO:GO:0008340 GO:GO:0009792 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 EMBL:FO080795
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 PIR:T28811 RefSeq:NP_509204.3
IntAct:Q18823 MINT:MINT-118164 STRING:Q18823 PaxDb:Q18823
EnsemblMetazoa:C54D1.5.1 EnsemblMetazoa:C54D1.5.2 GeneID:180980
KEGG:cel:CELE_C54D1.5 UCSC:C54D1.5 CTD:180980 WormBase:C54D1.5
eggNOG:NOG235720 GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
InParanoid:Q18823 OMA:DRCKENK NextBio:911826 Uniprot:Q18823
Length = 1633
Score = 470 (170.5 bits), Expect = 3.4e-43, P = 3.4e-43
Identities = 74/135 (54%), Positives = 99/135 (73%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ SNRC+FD++L+ TGHGGHC+DCQG+ G +CE+C N++++ G+N+C AC CN
Sbjct: 347 CNCSQLSNRCYFDQQLFEETGHGGHCIDCQGNTQGVHCEQCIANHWRRPGENYCVACGCN 406
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
IGSL+ QC++EG+CQCKPGVTG CD+C YDF GCK+C C +GS+ N P CDS
Sbjct: 407 EIGSLSTQCDNEGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKNCGCETSGSLNNQPRCDS 466
Query: 121 VKGQCESAQLSSRGR 135
G C S +L+ GR
Sbjct: 467 SSGSC-SCKLNVEGR 480
Score = 305 (112.4 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 78/261 (29%), Positives = 115/261 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--G-DNFCTAC 57
C+C+ SN C + E G C+ C+ + G CE+C YY + G + C C
Sbjct: 736 CDCHNHSNSC--EAE-------SGSCI-CEHNTAGDTCERCARGYYGDALQGTEEDCQKC 785
Query: 58 NCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKN 114
C G L + + C +C G TG +CD C ++ + G C C C+ +
Sbjct: 786 PCPNDGPCILHADGDVICTECPNGYTGRRCDECSDGYFGNPKDGTECVECACSGNTDPNS 845
Query: 115 TPNCDSVKGQCESAQLSSRG--------RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
NCD + G+C+ ++ G + ++ + N G RR D Y
Sbjct: 846 IGNCDKITGECKKCIFNTHGFNCENCKPGYWGDALIEPKGNCQSCGCFAAGTRRPNND-Y 904
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
L L+CN + G+C C P V G +CD+C Y+ GC+ C C+P GS NT
Sbjct: 905 TL-------LECNQQDGQCDCLPNVIGIQCDQCAHGFYNITSGLGCQECNCDPLGSEGNT 957
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD GQC+CK V G +C
Sbjct: 958 --CDVNTGQCQCKPGVTGQRC 976
Score = 290 (107.1 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 78/236 (33%), Positives = 108/236 (45%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-CTACNCNPIGSLNLQCNSEGRC-----QCKP 79
C +C G C++C D Y+ D C C C+ G N NS G C +CK
Sbjct: 803 CTECPNGYTGRRCDECSDGYFGNPKDGTECVECACS--G--NTDPNSIGNCDKITGECKK 858
Query: 80 GVT---GDKCDRCDVNHYDFG----EAGCKSCECNPAGSVKNTPNCDSVKGQC--ESAQL 130
+ G C+ C ++ + C+SC C AG+ + PN D +C + Q
Sbjct: 859 CIFNTHGFNCENCKPGYWGDALIEPKGNCQSCGCFAAGTRR--PNNDYTLLECNQQDGQC 916
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPG 189
V Q F + + + C D PLG G+ C+ + G+CQCKPG
Sbjct: 917 DCLPNVIGIQCDQCAHGFYNITSGL-GCQECNCD--PLGSEGNT---CDVNTGQCQCKPG 970
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG +CDRC H+ F GC+ C+C GS +N CD GQC CK+NVEG +C
Sbjct: 971 VTGQRCDRCADYHFGFSANGCQPCDCEYIGS-ENQ-QCDVNSGQCLCKENVEGRRC 1024
Score = 284 (105.0 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 73/226 (32%), Positives = 99/226 (43%)
Query: 31 GDRDGPNCEKCRDNYYQKSGDNFCTACNCNP-----IGSLNLQCNSEGRCQCKPGVTGDK 85
GD + + R YY S C CN +GS ++ + C+C+ G
Sbjct: 261 GDEVFKDPQVLRSYYYAISDFAVGGRCKCNGHASECVGSSSVDGENRLVCRCEHNTQGAD 320
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
C+ C + D S E N + NC + +C Q H + +
Sbjct: 321 CNECLPFYNDRPWRSGTSVEANECIAC----NCSQLSNRCYFDQQLFEETGHGGHCIDCQ 376
Query: 146 KNFDPAGNRIWDLRRCKR--DTYPLGHG----GSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
N +R + Y + G GSL+ QC++EG+CQCKPGVTG CD+C
Sbjct: 377 GNTQGVHCEQCIANHWRRPGENYCVACGCNEIGSLSTQCDNEGKCQCKPGVTGRFCDQCL 436
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
YDF GCK+C C +GS+ N P CDS G C CK NVEG QC
Sbjct: 437 DGFYDFSTNGCKNCGCETSGSLNNQPRCDSSSGSCSCKLNVEGRQC 482
Score = 244 (91.0 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 65/206 (31%), Positives = 94/206 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLN-------LQCNS 71
G C C + G NCE C+ Y+ + G+ C +C C G+ L+CN
Sbjct: 854 GECKKCIFNTHGFNCENCKPGYWGDALIEPKGN--CQSCGCFAAGTRRPNNDYTLLECNQ 911
Query: 72 E-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+ G+C C P V G +CD+C Y+ GC+ C C+P GS NT CD GQC+ +
Sbjct: 912 QDGQCDCLPNVIGIQCDQCAHGFYNITSGLGCQECNCDPLGSEGNT--CDVNTGQCQ-CK 968
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKP 188
G+ + F G + D C+ + GS N QC+ + G+C CK
Sbjct: 969 PGVTGQ-RCDRCADYHFGFSANGCQPCD---CE-------YIGSENQQCDVNSGQCLCKE 1017
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCE 214
V G +CD+C N Y + GC C+
Sbjct: 1018 NVEGRRCDQCAENRYGITQ-GCLPCD 1042
Score = 175 (66.7 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 67/246 (27%), Positives = 99/246 (40%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQ--KSGD--NFCTACNCNPIGSLNLQCNSE-GRCQCKP 79
HC +C G CE C + + K G N C C+C+ + C +E G C C+
Sbjct: 701 HC-ECLPGFVGQFCESCESGFRRETKFGGPFNHCIKCDCHNHSN---SCEAESGSCICEH 756
Query: 80 GVTGDKCDRCDVNHYDFG----EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GD C+RC +Y E C+ C C G + D + +C + R
Sbjct: 757 NTAGDTCERCARGYYGDALQGTEEDCQKCPCPNDGPCILHADGDVICTECPNGYTGRRCD 816
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP--LGHGGSLNLQC-----NSEG-RCQ-C 186
++ + K+ G + C +T P +G+ + +C N+ G C+ C
Sbjct: 817 ECSDGYFGNPKD----GTECVECA-CSGNTDPNSIGNCDKITGECKKCIFNTHGFNCENC 871
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDN 239
KPG GD N C+SC C AG+ + PN C+ GQC+C N
Sbjct: 872 KPGYWGDALIEPKGN--------CQSCGCFAAGTRR--PNNDYTLLECNQQDGQCDCLPN 921
Query: 240 VEGAQC 245
V G QC
Sbjct: 922 VIGIQC 927
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 41/121 (33%), Positives = 55/121 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN + L + + G C C+ G C++C D +Y S N C C C
Sbjct: 403 CGCNEIGS-------LSTQCDNEGKC-QCKPGVTGRFCDQCLDGFYDFS-TNGCKNCGCE 453
Query: 61 PIGSLNLQ--CNSE-GRCQCKPGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKN 114
GSLN Q C+S G C CK V G +CD+C ++D + GC C C S+ N
Sbjct: 454 TSGSLNNQPRCDSSSGSCSCKLNVEGRQCDKCKPGYFDLSTENQFGCTPCFCFGHSSICN 513
Query: 115 T 115
T
Sbjct: 514 T 514
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 45/182 (24%), Positives = 74/182 (40%)
Query: 75 CQCKPGVTGDKCDRCDVN---HYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+C PG G C+ C+ FG C C+C+ ++ +C++ G C +
Sbjct: 702 CECLPGFVGQFCESCESGFRRETKFGGPFNHCIKCDCH-----NHSNSCEAESGSC-ICE 755
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC-QCKP 188
++ G T R D D ++C P + G L + + C +C
Sbjct: 756 HNTAG--DTCERCARGYYGDALQGTEEDCQKC-----PCPNDGPCILHADGDVICTECPN 808
Query: 189 GVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQC 245
G TG +CD C ++ + G C C C+ + NCD + G+C+ C N G C
Sbjct: 809 GYTGRRCDECSDGYFGNPKDGTECVECACSGNTDPNSIGNCDKITGECKKCIFNTHGFNC 868
Query: 246 RS 247
+
Sbjct: 869 EN 870
>ZFIN|ZDB-GENE-021226-3 [details] [associations]
symbol:lamc1 "laminin, gamma 1" species:7955 "Danio
rerio" [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007634 "optokinetic behavior" evidence=IMP]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=IMP] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] ZFIN:ZDB-GENE-021226-3 GO:GO:0007155
PROSITE:PS00022 GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0050908 GO:GO:0031290 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0007634 eggNOG:NOG235720 GeneTree:ENSGT00690000102103
HOGENOM:HOG000019301 EMBL:AF468048 EMBL:BX681417 EMBL:BX571812
IPI:IPI00496826 RefSeq:NP_775384.1 UniGene:Dr.132970
ProteinModelPortal:Q1LVF0 SMR:Q1LVF0 STRING:Q1LVF0
Ensembl:ENSDART00000004277 GeneID:286832 KEGG:dre:286832 CTD:3915
HOVERGEN:HBG100808 InParanoid:Q8JHV8 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS NextBio:20806483 ArrayExpress:Q1LVF0 Bgee:Q1LVF0
Uniprot:Q1LVF0
Length = 1593
Score = 445 (161.7 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 70/126 (55%), Positives = 87/126 (69%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG S C+FD ELY TGHGGHC +C + DGP CE+C NYY+++ C +C CN
Sbjct: 326 CNCNGKSAECYFDPELYRATGHGGHCRNCADNTDGPKCERCLANYYREASGQRCLSCGCN 385
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC++ GRC CKPGV GDKCDRC ++ EAGC+ C CNPAGS T CD
Sbjct: 386 PVGSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHSLSEAGCRPCSCNPAGS---TQECDV 442
Query: 121 VKGQCE 126
G+C+
Sbjct: 443 QTGRCQ 448
Score = 321 (118.1 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 79/236 (33%), Positives = 110/236 (46%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNL--QCNSE-GRC-Q 76
C +C G CE C D ++ +K C AC+CN N CN E G C +
Sbjct: 776 CTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNNNIDPNAVGNCNRESGECLK 835
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESA-QL 130
C G CDRC Y A CK C+C+P G+V C V GQC +
Sbjct: 836 CIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQTACSQVTGQCPCLPHV 895
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPG 189
+R EL + ++ G RC + P+G S N QC+ G+C+C+PG
Sbjct: 896 INRDCGACELGFYNLQS----GK---GCERCNCN--PIG---STNGQCDIVSGQCECQPG 943
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG C+RC+VN + F +GCK C+C+P GS + C G+C C+ G++C
Sbjct: 944 VTGQHCERCEVNFFGFSSSGCKPCDCDPEGS--ESAQCKE-DGRCHCRPGFVGSRC 996
Score = 312 (114.9 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 84/261 (32%), Positives = 116/261 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
CNCNG S+ C D E G C +CQ + G +CE+C+D +Y S + C AC
Sbjct: 708 CNCNGHSDTC--DPET-------GMC-NCQHNTAGLSCERCKDGFYGDSTVGSSSDCKAC 757
Query: 58 NCNPIGSLN--LQCNSEGRC-QCKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNP 108
C P G+ + +E C C G TG +C+ CD + GE G C++C CN
Sbjct: 758 PC-PAGATCAVVPKTNEVVCTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNN 816
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
NC+ G+C ++ G V + Q A N + CK Y
Sbjct: 817 NIDPNAVGNCNRESGECLKCIYNTAG-VFCDRCKQGFYGDARAANVADKCKPCKCSPY-- 873
Query: 169 GHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G+++ Q C+ G+C C P V C C++ Y+ GC+ C CNP GS
Sbjct: 874 ---GTVDRQTACSQVTGQCPCLPHVINRDCGACELGFYNLQSGKGCERCNCNPIGSTNG- 929
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD V GQCEC+ V G C
Sbjct: 930 -QCDIVSGQCECQPGVTGQHC 949
Score = 294 (108.6 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 71/222 (31%), Positives = 103/222 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-GDNF---CTA 56
C+CN +N + N G CL C + G C++C+ +Y + N C
Sbjct: 812 CSCN--NN--IDPNAVGNCNRESGECLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKP 867
Query: 57 CNCNPIGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 112
C C+P G+++ Q C+ G+C C P V C C++ Y+ GC+ C CNP GS
Sbjct: 868 CKCSPYGTVDRQTACSQVTGQCPCLPHVINRDCGACELGFYNLQSGKGCERCNCNPIGST 927
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
CD V GQCE Q G+ H E + F +G + D C + G
Sbjct: 928 NG--QCDIVSGQCE-CQPGVTGQ-HCERCEVNFFGFSSSGCKPCD---CDPE-------G 973
Query: 173 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNH-YDFGEAGCKSC 213
S + QC +GRC C+PG G +CD C+ N+ Y+ GC+ C
Sbjct: 974 SESAQCKEDGRCHCRPGFVGSRCDMCEENYFYNRSTPGCQQC 1015
Score = 269 (99.8 bits), Expect = 8.5e-22, P = 8.5e-22
Identities = 76/221 (34%), Positives = 99/221 (44%)
Query: 37 NCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNH 93
N K +YY D F C CN S ++ S+ C CK G C+ C +
Sbjct: 249 NDPKVLKSYYYAISD-FAVGGRCKCNGHASECVKNEYSKLVCNCKHNTEGADCNVCKPFY 307
Query: 94 YD--FGEAGCKSC-ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD- 149
D + A ++ EC P NC+ +C R H N D
Sbjct: 308 NDRPWRRATAENPNECLPC-------NCNGKSAECYFDPELYRATGHGGHCRNCADNTDG 360
Query: 150 PAGNR-IWDLRRCKRDTYPLGHG----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD 204
P R + + R L G GSL+ QC++ GRC CKPGV GDKCDRC ++
Sbjct: 361 PKCERCLANYYREASGQRCLSCGCNPVGSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHS 420
Query: 205 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
EAGC+ C CNPAGS T CD G+C+CK+NV+G C
Sbjct: 421 LSEAGCRPCSCNPAGS---TQECDVQTGRCQCKENVDGFNC 458
Score = 222 (83.2 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 69/229 (30%), Positives = 94/229 (41%)
Query: 35 GPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDR 88
G +CE+C D +++S C CNCN G + C+ E G C C+ G C+R
Sbjct: 682 GQHCEQC-DQGFRRSRPELRRFSTCERCNCN--GHSDT-CDPETGMCNCQHNTAGLSCER 737
Query: 89 CDVNHYDFGEAG----CKSCECNPAGSV-KNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C Y G CK+C C PAG+ P + V C + + G+ EL
Sbjct: 738 CKDGFYGDSTVGSSSDCKACPC-PAGATCAVVPKTNEVV--CTNCPTGTTGK-RCELCDD 793
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRC-QCKPGVTGDKCDRCDVN 201
DP G + +R C+ + + CN E G C +C G CDRC
Sbjct: 794 GFFG-DPLGEK-GPVRACRACSCNNNIDPNAVGNCNRESGECLKCIYNTAGVFCDRCKQG 851
Query: 202 HYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y A CK C+C+P G+V C V GQC C +V C
Sbjct: 852 FYGDARAANVADKCKPCKCSPYGTVDRQTACSQVTGQCPCLPHVINRDC 900
Score = 169 (64.5 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 40/127 (31%), Positives = 59/127 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN + L + + G C C+ G C++C+ Y+ S + C C+CN
Sbjct: 382 CGCNPVGS-------LSTQCDNTGRC-SCKPGVMGDKCDRCQPGYHSLS-EAGCRPCSCN 432
Query: 61 PIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTP 116
P GS +C+ + GRCQCK V G CDRC + +++ GC C C +V
Sbjct: 433 PAGSTQ-ECDVQTGRCQCKENVDGFNCDRCKLGYFNLDPQNPQGCTPCFCFQHSTV---- 487
Query: 117 NCDSVKG 123
C+S G
Sbjct: 488 -CESADG 493
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 48/184 (26%), Positives = 73/184 (39%)
Query: 74 RCQCKPGVTGDKCDRCDVN-HYDFGE----AGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
+C C G G C++CD E + C+ C CN G ++ CD G C +
Sbjct: 673 KCTCPQGYLGQHCEQCDQGFRRSRPELRRFSTCERCNCN--G---HSDTCDPETGMC-NC 726
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
Q ++ G L + K+ + + CK P G ++ + N C
Sbjct: 727 QHNTAG-----LSCERCKDGFYGDSTVGSSSDCKACPCPAGATCAVVPKTNEVVCTNCPT 781
Query: 189 GVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVE 241
G TG +C+ CD + GE G C++C CN NC+ G+C +C N
Sbjct: 782 GTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNNNIDPNAVGNCNRESGECLKCIYNTA 841
Query: 242 GAQC 245
G C
Sbjct: 842 GVFC 845
>UNIPROTKB|F1S663 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:CU914232 Ensembl:ENSSSCT00000016945
Uniprot:F1S663
Length = 1606
Score = 444 (161.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 69/125 (55%), Positives = 89/125 (71%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DGPNCE+CR+NY++ C+ C+C+
Sbjct: 341 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGPNCERCRENYFRLGNREACSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC ++ EAGC+ C CNP+GS T C+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGS---TDECNV 457
Query: 121 VKGQC 125
G+C
Sbjct: 458 ETGRC 462
Score = 345 (126.5 bits), Expect = 7.0e-30, P = 7.0e-30
Identities = 83/236 (35%), Positives = 113/236 (47%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNL--QCNS-EGRC-Q 76
C +C G CE C D Y+ G N C C CN N CN G C +
Sbjct: 791 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLK 850
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C G CDRC + A CK+C+CNP G+VK +C+ V GQCE
Sbjct: 851 CIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQCECLP-- 908
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPG 189
H R DP + + CKR + + LG S N QC+ G+C+C+PG
Sbjct: 909 -----HVTGRDCGA--CDPGFYNLQSGQGCKRCECHALG---STNGQCDVHTGQCECQPG 958
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+TG C+RC+VNH+ FG GCK C+C+P G++ + C G+CEC++ G +C
Sbjct: 959 ITGQHCERCEVNHFGFGPEGCKPCDCHPEGAL--SLQCKD-DGRCECREGFVGNRC 1011
Score = 325 (119.5 bits), Expect = 9.4e-28, P = 9.4e-28
Identities = 73/200 (36%), Positives = 103/200 (51%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q CN G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GCK CEC+ GS CD GQCE Q G+
Sbjct: 906 CLPHVTGRDCGACDPGFYNLQSGQGCKRCECHALGSTNG--QCDVHTGQCE-CQPGITGQ 962
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P G+L+LQC +GRC+C+ G G++
Sbjct: 963 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGALSLQCKDDGRCECREGFVGNR 1010
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1011 CDQCEENYFYNRSWPGCQEC 1030
Score = 308 (113.5 bits), Expect = 6.0e-26, P = 6.0e-26
Identities = 86/260 (33%), Positives = 115/260 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S G + C C
Sbjct: 723 CTCNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTVGTSSDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYP 167
NC+ + G+C ++ G + + R + +P D +CK D P
Sbjct: 832 NIDPNAVGNCNRLTGECLKCIYNTAG-FYCD-RCKDGFFGNPLAPNPAD--KCKACDCNP 887
Query: 168 LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 225
G + CN G+C+C P VTG C CD Y+ GCK CEC+ GS
Sbjct: 888 YGTVKQQS-SCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCKRCECHALGSTNG-- 944
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 945 QCDVHTGQCECQPGITGQHC 964
Score = 279 (103.3 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 79/225 (35%), Positives = 104/225 (46%)
Query: 37 NCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDRC--DV 91
N K +YY D F C CN S ++ + C CK G C++C
Sbjct: 264 NDPKVLKSYYYAISD-FAVGGRCKCNGHASECVKNEFDKLVCNCKHNTYGVDCEKCLPFF 322
Query: 92 NHYDFGEAGCKSC-ECNPAGSVKNTPNC--DSVK-------GQCESAQLSSRGRVHTELR 141
N + A +S EC P + C D G C + Q ++ G + E
Sbjct: 323 NDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGP-NCE-- 379
Query: 142 VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
+ R+N+ GNR C P+G SL+ QC+S GRC CKPGV GDKCDRC
Sbjct: 380 -RCRENYFRLGNR----EACSPCHCSPVG---SLSTQCDSYGRCSCKPGVMGDKCDRCQP 431
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ EAGC+ C CNP+GS T C+ G+C CKDNVEG C
Sbjct: 432 GYHSLTEAGCRPCSCNPSGS---TDECNVETGRCVCKDNVEGFNC 473
Score = 208 (78.3 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
H G C +CQ G +CE+C N++ G C C+C+P G+L+LQC +GRC+C+ G
Sbjct: 949 HTGQC-ECQPGITGQHCERCEVNHFG-FGPEGCKPCDCHPEGALSLQCKDDGRCECREGF 1006
Query: 82 TGDKCDRCDVNH-YDFGEAGCKSC 104
G++CD+C+ N+ Y+ GC+ C
Sbjct: 1007 VGNRCDQCEENYFYNRSWPGCQEC 1030
Score = 156 (60.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 33/93 (35%), Positives = 47/93 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C C+ G C++C+ Y+ + + C C+CNP GS + +CN E GRC CK V
Sbjct: 413 GRC-SCKPGVMGDKCDRCQPGYHSLT-EAGCRPCSCNPSGSTD-ECNVETGRCVCKDNVE 469
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
G C+RC ++ + GC C C SV
Sbjct: 470 GFNCERCKPGFFNLESSNPRGCTPCFCFGHSSV 502
Score = 118 (46.6 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 49/186 (26%), Positives = 70/186 (37%)
Query: 75 CQCKPGVTGDKCDRCDVNHY-----DFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C C G G C+ C ++ Y G + C C CN G ++ CD G C
Sbjct: 689 CTCPVGYGGQFCEMC-LSGYRRETPSLGPYSPCVLCTCN--G---HSETCDPETGVCNCR 742
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QC 186
++ G H E G D + C P G S + + E C C
Sbjct: 743 D-NTAGP-HCEKCSDGYYGDSTVGTSS-DCQPC-----PCPGGSSCAVVPKTQEVVCTNC 794
Query: 187 KPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKDN 239
G TG +C+ CD ++ G G C+ C+CN NC+ + G+C +C N
Sbjct: 795 PTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLKCIYN 854
Query: 240 VEGAQC 245
G C
Sbjct: 855 TAGFYC 860
Score = 76 (31.8 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1 CNCN--GFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTA 56
C+CN G ++ C + G C+ C+ + +G NCE+C+ ++ + S CT
Sbjct: 444 CSCNPSGSTDECNVET---------GRCV-CKDNVEGFNCERCKPGFFNLESSNPRGCTP 493
Query: 57 CNC 59
C C
Sbjct: 494 CFC 496
>UNIPROTKB|F1PHK9 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043259 "laminin-10 complex" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] GO:GO:0016477 GO:GO:0006461
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AAEX03005149 EMBL:AAEX03005150 Ensembl:ENSCAFT00000020993
Uniprot:F1PHK9
Length = 1487
Score = 435 (158.2 bits), Expect = 1.6e-39, P = 1.6e-39
Identities = 67/125 (53%), Positives = 89/125 (71%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQG+ DG NCE+CR+N+++ C+ C+C+
Sbjct: 220 CDCNGRSQECYFDPELYRSTGHGGHCTNCQGNTDGANCERCRENFFRLVSHEACSPCHCS 279
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV G+KCDRC ++ EAGC+ C CNPAGS+ C+
Sbjct: 280 PVGSLSTQCDSYGRCSCKPGVMGEKCDRCQPGYHSLTEAGCRPCSCNPAGSIDE---CNV 336
Query: 121 VKGQC 125
G+C
Sbjct: 337 ETGRC 341
Score = 341 (125.1 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 84/236 (35%), Positives = 110/236 (46%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNL--QCNS-EGRC-Q 76
C +C G CE C D Y+ G N C C CN N CN G C +
Sbjct: 670 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLK 729
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C G CDRC + A C++C CNP G+VK +C+ V GQCE
Sbjct: 730 CIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACACNPYGTVKQQSSCNPVTGQCECLP-- 787
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPG 189
H R DP + + C+R D + LG S N QC+ G+C+C+PG
Sbjct: 788 -----HVTGRDCGA--CDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQCECQPG 837
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+TG C+ C+VNH+ FG GCK C+C+P GSV + C G+CECK G +C
Sbjct: 838 ITGQHCEHCEVNHFGFGPEGCKPCDCHPEGSV--SLQCKD-DGRCECKQGFVGNRC 890
Score = 317 (116.6 bits), Expect = 6.0e-27, P = 6.0e-27
Identities = 72/200 (36%), Positives = 102/200 (51%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC CNP G++ Q CN G+C+
Sbjct: 725 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACACNPYGTVKQQSSCNPVTGQCE 784
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 785 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 841
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GS++LQC +GRC+CK G G++
Sbjct: 842 -HCEHCEVNHFGFGPEG--------CKPCDCHP---EGSVSLQCKDDGRCECKQGFVGNR 889
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 890 CDQCEENYFYNRSWPGCQEC 909
Score = 306 (112.8 bits), Expect = 8.9e-26, P = 8.9e-26
Identities = 85/262 (32%), Positives = 116/262 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C CNG S C D E G C DC+ + GP+CEKC D YY S + C C
Sbjct: 602 CTCNGHSETC--DPET-------GVC-DCRDNTAGPHCEKCSDGYYGDSTTGSSSDCQPC 651
Query: 58 NCNPIGS--LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+CN
Sbjct: 652 PC-PGGSSCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCND 710
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP-AGNRIWDLRRCKRDTYP 167
NC+ + G+C ++ G + + R + +P A N R C + Y
Sbjct: 711 NIDPNAVGNCNRLTGECLKCIYNTAG-FYCD-RCKDGFFGNPLAPNPADKCRACACNPY- 767
Query: 168 LGHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKN 223
G++ Q CN G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 768 ----GTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG 823
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 824 --QCDIRTGQCECQPGITGQHC 843
Score = 268 (99.4 bits), Expect = 9.9e-22, P = 9.9e-22
Identities = 77/225 (34%), Positives = 103/225 (45%)
Query: 37 NCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDRC--DV 91
N K +YY D F C CN S ++ + C CK G C++C
Sbjct: 143 NDPKVLKSYYYAISD-FAVGGRCKCNGHASECVKNEFDKLVCNCKHNTYGVDCEKCLPFF 201
Query: 92 NHYDFGEAGCKSC-ECNPAGSVKNTPNC--DSVK-------GQCESAQLSSRGRVHTELR 141
N + A +S EC P + C D G C + Q ++ G + E
Sbjct: 202 NDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCQGNTDG-ANCE-- 258
Query: 142 VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
+ R+NF R+ C P+G SL+ QC+S GRC CKPGV G+KCDRC
Sbjct: 259 -RCRENFF----RLVSHEACSPCHCSPVG---SLSTQCDSYGRCSCKPGVMGEKCDRCQP 310
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ EAGC+ C CNPAGS+ C+ G+C CKDNVEG C
Sbjct: 311 GYHSLTEAGCRPCSCNPAGSIDE---CNVETGRCVCKDNVEGFNC 352
Score = 160 (61.4 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C C+ G C++C+ Y+ + + C C+CNP GS++ +CN E GRC CK V
Sbjct: 292 GRC-SCKPGVMGEKCDRCQPGYHSLT-EAGCRPCSCNPAGSID-ECNVETGRCVCKDNVE 348
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
G C+RC ++ + GC C C SV
Sbjct: 349 GFNCERCKPGFFNLESSNPRGCTPCFCFGHSSV 381
Score = 121 (47.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 49/186 (26%), Positives = 72/186 (38%)
Query: 75 CQCKPGVTGDKCDRCDVNHY-----DFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C C G G C+ C ++ Y G + C C CN G ++ CD G C+
Sbjct: 568 CTCPVGYGGQFCEMC-LSGYRRETPSLGPYSPCVLCTCN--G---HSETCDPETGVCDCR 621
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QC 186
++ G H E G+ D + C P G S + + E C C
Sbjct: 622 D-NTAGP-HCEKCSDGYYGDSTTGSSS-DCQPC-----PCPGGSSCAVVPKTQEVVCTNC 673
Query: 187 KPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKDN 239
G TG +C+ CD ++ G G C+ C+CN NC+ + G+C +C N
Sbjct: 674 PTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLKCIYN 733
Query: 240 VEGAQC 245
G C
Sbjct: 734 TAGFYC 739
Score = 76 (31.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEG 73
G C+ C+ + +G NCE+C+ ++ + S CT C C G ++ N+ G
Sbjct: 339 GRCV-CKDNVEGFNCERCKPGFFNLESSNPRGCTPCFC--FGHSSVCTNAVG 387
>UNIPROTKB|F1NI05 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00822825
Ensembl:ENSGALT00000039414 ArrayExpress:F1NI05 Uniprot:F1NI05
Length = 1007
Score = 427 (155.4 bits), Expect = 5.3e-39, P = 5.3e-39
Identities = 66/125 (52%), Positives = 87/125 (69%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC+ C+ + DG +CE+CRD++Y+ + C C+CN
Sbjct: 97 CDCNGRSQECYFDPELYRSTGHGGHCMGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCN 156
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S G+C CKPGV G+KCDRC + EAGC+ C CNPAGS T C+
Sbjct: 157 PVGSLSTQCDSYGQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCNPAGS---TGECNM 213
Query: 121 VKGQC 125
G+C
Sbjct: 214 ETGRC 218
Score = 359 (131.4 bits), Expect = 1.0e-31, P = 1.0e-31
Identities = 88/236 (37%), Positives = 115/236 (48%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDNF----CTACNCNPIGSLNL--QCNSE-GRC-Q 76
C CQ G CE C D Y+ G+N C C CN N CN + G C +
Sbjct: 547 CTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQTGECLK 606
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C G CDRC + A C++C CNP G+V +C+ V GQCE LS
Sbjct: 607 CIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQCEC--LS 664
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCKPG 189
H R S +P + R C+R D + LG S N QC+ G+C+C+PG
Sbjct: 665 -----HVTERDCSA--CEPGFFNLQSGRGCERCDCHALG---STNGQCDIWTGQCECQPG 714
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG +CDRC+ NH+ FG GCK C+C+P GS C G+CECK+ G++C
Sbjct: 715 VTGQRCDRCEANHFGFGPEGCKPCDCDPEGS--RALQCRE-DGRCECKEGFVGSRC 767
Score = 291 (107.5 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 81/227 (35%), Positives = 102/227 (44%)
Query: 37 NCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRC--D 90
N K +YY D F C CN S ++ N G+ C CK GD C++C
Sbjct: 20 NDPKVLKSYYYAISD-FAVGGRCKCNGHASECIR-NELGKLVCNCKHNTFGDDCEKCLPF 77
Query: 91 VNHYDFGEAGCKSC-ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD 149
N + A +S EC P +C+ +C R H + R N D
Sbjct: 78 FNDRPWRRATAESANECLPC-------DCNGRSQECYFDPELYRSTGHGGHCMGCRDNTD 130
Query: 150 PAGNRIWDLRRCKRDTYPLG--HG---------GSLNLQCNSEGRCQCKPGVTGDKCDRC 198
A RC+ Y LG G GSL+ QC+S G+C CKPGV G+KCDRC
Sbjct: 131 GA-----HCERCRDSFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQCSCKPGVMGEKCDRC 185
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ EAGC+ C CNPAGS T C+ G+C CKDNVEG C
Sbjct: 186 QPGFHSLSEAGCRPCSCNPAGS---TGECNMETGRCTCKDNVEGFHC 229
Score = 283 (104.7 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 65/199 (32%), Positives = 97/199 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++N Q CN G+C+
Sbjct: 602 GECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQCE 661
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C VT C C+ ++ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 662 CLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNG--QCDIWTGQCE-CQPGVTGQ 718
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+ + F P G + D C + GS LQC +GRC+CK G G +C
Sbjct: 719 -RCDRCEANHFGFGPEGCKPCD---CDPE-------GSRALQCREDGRCECKEGFVGSRC 767
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 768 DQCEENYFYNRSWPGCQEC 786
Score = 283 (104.7 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 83/262 (31%), Positives = 116/262 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTAC 57
C CNG S C D E G C DC+ + G +CEKC D YY +G C C
Sbjct: 479 CTCNGHSETC--DPET-------GMC-DCRDNTAGSHCEKCSDGYYGDATAGTALDCQPC 528
Query: 58 NCNPIGS--LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNP 108
C P GS + E C C+ G TG +C+ CD ++ GE G C+ C+CN
Sbjct: 529 PC-PGGSSCAVVPRTKEVVCTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCND 587
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP-AGNRIWDLRRCKRDTYP 167
NC+ G+C ++ G + + R + +P A N R C + Y
Sbjct: 588 NIDPNAVGNCNRQTGECLKCIYNTAG-FYCD-RCKDGFFGNPLATNPADKCRACHCNPY- 644
Query: 168 LGHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKN 223
G++N Q CN G+C+C VT C C+ ++ GC+ C+C+ GS
Sbjct: 645 ----GTVNQQTSCNQVTGQCECLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNG 700
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ V G +C
Sbjct: 701 --QCDIWTGQCECQPGVTGQRC 720
Score = 233 (87.1 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 69/235 (29%), Positives = 95/235 (40%)
Query: 29 CQGDRDGPNCEKCRDNYYQKS---GD-NFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTG 83
C +G CE+C Y +++ G + C C CN G C+ E G C C+ G
Sbjct: 447 CPAGYEGQFCERCSPGYRRETPGLGPYSPCVPCTCN--GHSET-CDPETGMCDCRDNTAG 503
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
C++C +Y AG C+ C C S P V C S Q + G+ E
Sbjct: 504 SHCEKCSDGYYGDATAGTALDCQPCPCPGGSSCAVVPRTKEVV--CTSCQTGTTGK-RCE 560
Query: 140 LRVQSRKNFDPAGNR--IWDLRRCK-RDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKC 195
L + DP G + R C+ D G+ N Q G C +C G C
Sbjct: 561 LCDDAYFG-DPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQT---GECLKCIYNTAGFYC 616
Query: 196 DRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
DRC + A C++C CNP G+V +C+ V GQCEC +V C
Sbjct: 617 DRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQCECLSHVTERDC 671
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 35/93 (37%), Positives = 45/93 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C C+ G C++C+ ++ S + C C+CNP GS +CN E GRC CK V
Sbjct: 169 GQC-SCKPGVMGEKCDRCQPGFHSLS-EAGCRPCSCNPAGSTG-ECNMETGRCTCKDNVE 225
Query: 83 GDKCDRCDVN--HYD-FGEAGCKSCECNPAGSV 112
G C+RC H D GC C C SV
Sbjct: 226 GFHCERCKPGFFHLDPSNPRGCTPCFCFGHSSV 258
Score = 144 (55.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 55/220 (25%), Positives = 83/220 (37%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----D 95
K R Y ++S + + + + C C G G C+RC +
Sbjct: 410 KIRGTYSERSAGHLDDVTITSAVPGAGVPAAWVESCSCPAGYEGQFCERCSPGYRRETPG 469
Query: 96 FGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
G + C C CN G ++ CD G C+ ++ G H E AG
Sbjct: 470 LGPYSPCVPCTCN--G---HSETCDPETGMCDCRD-NTAGS-HCEKCSDGYYGDATAGTA 522
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYD--FGEAG- 209
+ D + C P G S + + E C C+ G TG +C+ CD ++ GE G
Sbjct: 523 L-DCQPC-----PCPGGSSCAVVPRTKEVVCTSCQTGTTGKRCELCDDAYFGDPLGENGA 576
Query: 210 ---CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
C+ C+CN NC+ G+C +C N G C
Sbjct: 577 VRPCRLCQCNDNIDPNAVGNCNRQTGECLKCIYNTAGFYC 616
Score = 66 (28.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 1 CNCN--GFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTA 56
C+CN G + C + G C C+ + +G +CE+C+ ++ N CT
Sbjct: 200 CSCNPAGSTGECNMET---------GRCT-CKDNVEGFHCERCKPGFFHLDPSNPRGCTP 249
Query: 57 CNC 59
C C
Sbjct: 250 CFC 252
>UNIPROTKB|F1NK49 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00596936
Ensembl:ENSGALT00000007355 ArrayExpress:F1NK49 Uniprot:F1NK49
Length = 1608
Score = 427 (155.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 66/125 (52%), Positives = 87/125 (69%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC+ C+ + DG +CE+CRD++Y+ + C C+CN
Sbjct: 341 CDCNGRSQECYFDPELYRSTGHGGHCMGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCN 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S G+C CKPGV G+KCDRC + EAGC+ C CNPAGS T C+
Sbjct: 401 PVGSLSTQCDSYGQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCNPAGS---TGECNM 457
Query: 121 VKGQC 125
G+C
Sbjct: 458 ETGRC 462
Score = 359 (131.4 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 88/236 (37%), Positives = 115/236 (48%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDNF----CTACNCNPIGSLNL--QCNSE-GRC-Q 76
C CQ G CE C D Y+ G+N C C CN N CN + G C +
Sbjct: 791 CTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQTGECLK 850
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C G CDRC + A C++C CNP G+V +C+ V GQCE LS
Sbjct: 851 CIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQCEC--LS 908
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCKPG 189
H R S +P + R C+R D + LG S N QC+ G+C+C+PG
Sbjct: 909 -----HVTERDCSA--CEPGFFNLQSGRGCERCDCHALG---STNGQCDIWTGQCECQPG 958
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG +CDRC+ NH+ FG GCK C+C+P GS C G+CECK+ G++C
Sbjct: 959 VTGQRCDRCEANHFGFGPEGCKPCDCDPEGS--RALQCRE-DGRCECKEGFVGSRC 1011
Score = 291 (107.5 bits), Expect = 3.9e-24, P = 3.9e-24
Identities = 81/227 (35%), Positives = 102/227 (44%)
Query: 37 NCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRC--D 90
N K +YY D F C CN S ++ N G+ C CK GD C++C
Sbjct: 264 NDPKVLKSYYYAISD-FAVGGRCKCNGHASECIR-NELGKLVCNCKHNTFGDDCEKCLPF 321
Query: 91 VNHYDFGEAGCKSC-ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD 149
N + A +S EC P +C+ +C R H + R N D
Sbjct: 322 FNDRPWRRATAESANECLPC-------DCNGRSQECYFDPELYRSTGHGGHCMGCRDNTD 374
Query: 150 PAGNRIWDLRRCKRDTYPLG--HG---------GSLNLQCNSEGRCQCKPGVTGDKCDRC 198
A RC+ Y LG G GSL+ QC+S G+C CKPGV G+KCDRC
Sbjct: 375 GA-----HCERCRDSFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQCSCKPGVMGEKCDRC 429
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ EAGC+ C CNPAGS T C+ G+C CKDNVEG C
Sbjct: 430 QPGFHSLSEAGCRPCSCNPAGS---TGECNMETGRCTCKDNVEGFHC 473
Score = 283 (104.7 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 65/199 (32%), Positives = 97/199 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++N Q CN G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C VT C C+ ++ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 906 CLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNG--QCDIWTGQCE-CQPGVTGQ 962
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
+ + F P G + D C + GS LQC +GRC+CK G G +C
Sbjct: 963 -RCDRCEANHFGFGPEGCKPCD---CDPE-------GSRALQCREDGRCECKEGFVGSRC 1011
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 1012 DQCEENYFYNRSWPGCQEC 1030
Score = 283 (104.7 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 83/262 (31%), Positives = 116/262 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNF-CTAC 57
C CNG S C D E G C DC+ + G +CEKC D YY +G C C
Sbjct: 723 CTCNGHSETC--DPET-------GMC-DCRDNTAGSHCEKCSDGYYGDATAGTALDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNP 108
C P GS + E C C+ G TG +C+ CD ++ GE G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPRTKEVVCTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP-AGNRIWDLRRCKRDTYP 167
NC+ G+C ++ G + + R + +P A N R C + Y
Sbjct: 832 NIDPNAVGNCNRQTGECLKCIYNTAG-FYCD-RCKDGFFGNPLATNPADKCRACHCNPY- 888
Query: 168 LGHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKN 223
G++N Q CN G+C+C VT C C+ ++ GC+ C+C+ GS
Sbjct: 889 ----GTVNQQTSCNQVTGQCECLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNG 944
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ V G +C
Sbjct: 945 --QCDIWTGQCECQPGVTGQRC 964
Score = 233 (87.1 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 69/235 (29%), Positives = 95/235 (40%)
Query: 29 CQGDRDGPNCEKCRDNYYQKS---GD-NFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTG 83
C +G CE+C Y +++ G + C C CN G C+ E G C C+ G
Sbjct: 691 CPAGYEGQFCERCSPGYRRETPGLGPYSPCVPCTCN--GHSET-CDPETGMCDCRDNTAG 747
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
C++C +Y AG C+ C C S P V C S Q + G+ E
Sbjct: 748 SHCEKCSDGYYGDATAGTALDCQPCPCPGGSSCAVVPRTKEVV--CTSCQTGTTGK-RCE 804
Query: 140 LRVQSRKNFDPAGNR--IWDLRRCK-RDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKC 195
L + DP G + R C+ D G+ N Q G C +C G C
Sbjct: 805 LCDDAYFG-DPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQT---GECLKCIYNTAGFYC 860
Query: 196 DRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
DRC + A C++C CNP G+V +C+ V GQCEC +V C
Sbjct: 861 DRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQCECLSHVTERDC 915
Score = 156 (60.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 35/93 (37%), Positives = 45/93 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C C+ G C++C+ ++ S + C C+CNP GS +CN E GRC CK V
Sbjct: 413 GQC-SCKPGVMGEKCDRCQPGFHSLS-EAGCRPCSCNPAGSTG-ECNMETGRCTCKDNVE 469
Query: 83 GDKCDRCDVN--HYD-FGEAGCKSCECNPAGSV 112
G C+RC H D GC C C SV
Sbjct: 470 GFHCERCKPGFFHLDPSNPRGCTPCFCFGHSSV 502
Score = 144 (55.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 55/220 (25%), Positives = 83/220 (37%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY----D 95
K R Y ++S + + + + C C G G C+RC +
Sbjct: 654 KIRGTYSERSAGHLDDVTITSAVPGAGVPAAWVESCSCPAGYEGQFCERCSPGYRRETPG 713
Query: 96 FGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
G + C C CN G ++ CD G C+ ++ G H E AG
Sbjct: 714 LGPYSPCVPCTCN--G---HSETCDPETGMCDCRD-NTAGS-HCEKCSDGYYGDATAGTA 766
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYD--FGEAG- 209
+ D + C P G S + + E C C+ G TG +C+ CD ++ GE G
Sbjct: 767 L-DCQPC-----PCPGGSSCAVVPRTKEVVCTSCQTGTTGKRCELCDDAYFGDPLGENGA 820
Query: 210 ---CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
C+ C+CN NC+ G+C +C N G C
Sbjct: 821 VRPCRLCQCNDNIDPNAVGNCNRQTGECLKCIYNTAGFYC 860
Score = 66 (28.3 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 1 CNCN--GFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTA 56
C+CN G + C + G C C+ + +G +CE+C+ ++ N CT
Sbjct: 444 CSCNPAGSTGECNMET---------GRCT-CKDNVEGFHCERCKPGFFHLDPSNPRGCTP 493
Query: 57 CNC 59
C C
Sbjct: 494 CFC 496
>UNIPROTKB|F1S0X0 [details] [associations]
symbol:LAMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:FP236754 EMBL:CU407178 Ensembl:ENSSSCT00000006279
Uniprot:F1S0X0
Length = 1583
Score = 376 (137.4 bits), Expect = 1.9e-38, Sum P(2) = 1.9e-38
Identities = 60/125 (48%), Positives = 81/125 (64%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ +GHGG CL C+ GP+CE+C++N+Y+ + C C+C+
Sbjct: 333 CNCSGHSEECIFDRELFRTSGHGGRCLHCRDHTAGPHCERCQENFYRWNPQMPCQPCDCH 392
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC+ G C+CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 393 PAGSLHLQCDDSGTCKCKPTVTGWKCDRCQPGFHSLSEGGCRPCTCNSAGSLGT---CDP 449
Query: 121 VKGQC 125
G+C
Sbjct: 450 RSGRC 454
Score = 285 (105.4 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 68/199 (34%), Positives = 96/199 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKS----GDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
GHCL C + G +CE+C++ +Y + ++ C C+CNP GS+ Q C+ G+C
Sbjct: 836 GHCLRCLHNTTGAHCERCQEGFYGDALASLPEDKCVPCSCNPGGSVGEQQPCDLVTGQCS 895
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C C YD GC+SC+C+P GS ++ C GQC R
Sbjct: 896 CLPHVTGRDCGHCSPGFYDLQPGRGCRSCKCHPLGSQED--QCHPKTGQCPC-----RPG 948
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
V + + + F G I R C+ PLG + + QC+ C C+PG G KC
Sbjct: 949 VEGQSCDRCQLGF--FGFSIRGCRACRCS--PLG---AASAQCHENSTCVCRPGFVGYKC 1001
Query: 196 DRCDVNHYDF-GEAGCKSC 213
DRC N + G C+ C
Sbjct: 1002 DRCQDNFFPTAGGTYCQQC 1020
Score = 278 (102.9 bits), Expect = 9.3e-23, P = 9.3e-23
Identities = 75/236 (31%), Positives = 99/236 (41%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQK----SG-DNFCTACNCNPIGSLNLQCNSE---GRC-Q 76
C C + G CE C D ++ SG C C C+ N N + G C +
Sbjct: 781 CTHCPPGQRGQRCEICDDGFFGDPLGLSGAPQPCRPCQCSGNVDPNAVGNCDPLTGHCLR 840
Query: 77 CKPGVTGDKCDRCDVNHY-----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA-QL 130
C TG C+RC Y E C C CNP GSV CD V GQC +
Sbjct: 841 CLHNTTGAHCERCQEGFYGDALASLPEDKCVPCSCNPGGSVGEQQPCDLVTGQCSCLPHV 900
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPG 189
+ R H S +D R R CK +PLG S QC+ + G+C C+PG
Sbjct: 901 TGRDCGHC-----SPGFYDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQCPCRPG 948
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G CDRC + + F GC++C C+P G+ + C C C+ G +C
Sbjct: 949 VEGQSCDRCQLGFFGFSIRGCRACRCSPLGAA--SAQCHE-NSTCVCRPGFVGYKC 1001
Score = 274 (101.5 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 76/237 (32%), Positives = 105/237 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK--SGD-NFCTACNCNPIGSLNLQCNS-EGRC-QCK 78
G CL C +GP+CE+C +Y +G + C C C + S E C C
Sbjct: 727 GICL-CGHHTEGPSCERCLPGFYGNPFTGQADDCQPCPCPGQSACTTMPESGEVVCTHCP 785
Query: 79 PGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
PG G +C+ CD + G +G C+ C+C+ NCD + G C ++
Sbjct: 786 PGQRGQRCEICDDGFFGDPLGLSGAPQPCRPCQCSGNVDPNAVGNCDPLTGHCLRCLHNT 845
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ--CNS-EGRCQCKPG 189
G H E R Q + F G+ + L K GGS+ Q C+ G+C C P
Sbjct: 846 TG-AHCE-RCQ--EGF--YGDALASLPEDKCVPCSCNPGGSVGEQQPCDLVTGQCSCLPH 899
Query: 190 VTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG C C YD GC+SC+C+P GS ++ C GQC C+ VEG C
Sbjct: 900 VTGRDCGHCSPGFYDLQPGRGCRSCKCHPLGSQED--QCHPKTGQCPCRPGVEGQSC 954
Score = 259 (96.2 bits), Expect = 9.8e-21, P = 9.8e-21
Identities = 74/217 (34%), Positives = 100/217 (46%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQC--NSEGR--CQCKPGVTGDKCDRCDVNHYD--FGE 98
YY S + C CN S +C + EG+ C+C+ TG C+RC D +
Sbjct: 265 YYAVSDFSVGGRCKCNGHAS---ECGPDEEGQLACRCQHNTTGPDCERCLPFFQDRPWAR 321
Query: 99 AGCKSC-ECNPAGSVKNTPNC---------DSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
++ EC P ++ C G+C + + G H E R Q +NF
Sbjct: 322 GTAEAANECLPCNCSGHSEECIFDRELFRTSGHGGRCLHCRDHTAGP-HCE-RCQ--ENF 377
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
N + C D +P GSL+LQC+ G C+CKP VTG KCDRC + E
Sbjct: 378 Y-RWNPQMPCQPC--DCHP---AGSLHLQCDDSGTCKCKPTVTGWKCDRCQPGFHSLSEG 431
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CN AGS+ CD G+C CK+NVEG C
Sbjct: 432 GCRPCTCNSAGSLGT---CDPRSGRCPCKENVEGNLC 465
Score = 199 (75.1 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 69/238 (28%), Positives = 89/238 (37%)
Query: 29 CQGDRDGPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTG 83
C G CE C Y +++ G + C C CN G+ C+ + G C C G
Sbjct: 682 CPSGYSGQFCESCAPGYKRETPLGGPYASCVPCICNQHGT----CDPNTGICLCGHHTEG 737
Query: 84 DKCDRCDVNHYD--F-GEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
C+RC Y F G+A C+ C C + P V C RG+
Sbjct: 738 PSCERCLPGFYGNPFTGQADDCQPCPCPGQSACTTMPESGEVV--CTHCPPGQRGQ---R 792
Query: 140 LRVQSRKNF-DPAGNRIWDLRRCKRDTYPLGHGGSL--NLQCNSE---GRC-QCKPGVTG 192
+ F DP G L + P G++ N N + G C +C TG
Sbjct: 793 CEICDDGFFGDPLG-----LSGAPQPCRPCQCSGNVDPNAVGNCDPLTGHCLRCLHNTTG 847
Query: 193 DKCDRCDVNHY-----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+RC Y E C C CNP GSV CD V GQC C +V G C
Sbjct: 848 AHCERCQEGFYGDALASLPEDKCVPCSCNPGGSVGEQQPCDLVTGQCSCLPHVTGRDC 905
Score = 168 (64.2 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C C+ ++ + + + +TG C C+ +G +C++C+ ++ S C AC C+
Sbjct: 924 CKCHPLGSQ---EDQCHPKTGQ---C-PCRPGVEGQSCDRCQLGFFGFSIRG-CRACRCS 975
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSC 104
P+G+ + QC+ C C+PG G KCDRC N + G C+ C
Sbjct: 976 PLGAASAQCHENSTCVCRPGFVGYKCDRCQDNFFPTAGGTYCQQC 1020
Score = 158 (60.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 45/142 (31%), Positives = 64/142 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKC----RDNYYQKS---GDNF 53
C CNG ++ C D+E G CQ + GP+CE+C +D + + N
Sbjct: 277 CKCNGHASECGPDEE-------GQLACRCQHNTTGPDCERCLPFFQDRPWARGTAEAANE 329
Query: 54 CTACNCNP-----IGSLNLQCNSE--GRC-QCKPGVTGDKCDRCDVNHYDFG-EAGCKSC 104
C CNC+ I L S GRC C+ G C+RC N Y + + C+ C
Sbjct: 330 CLPCNCSGHSEECIFDRELFRTSGHGGRCLHCRDHTAGPHCERCQENFYRWNPQMPCQPC 389
Query: 105 ECNPAGSVKNTPNCDSVKGQCE 126
+C+PAGS+ CD G C+
Sbjct: 390 DCHPAGSLHL--QCDD-SGTCK 408
Score = 152 (58.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 32/94 (34%), Positives = 44/94 (46%)
Query: 16 LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRC 75
L+ + G C C+ G C++C+ ++ S + C C CN GSL GRC
Sbjct: 397 LHLQCDDSGTC-KCKPTVTGWKCDRCQPGFHSLS-EGGCRPCTCNSAGSLGTCDPRSGRC 454
Query: 76 QCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 106
CK V G+ CDRC ++ AGC SC C
Sbjct: 455 PCKENVEGNLCDRCRPGTFNLQPHNPAGCSSCFC 488
Score = 80 (33.2 bits), Expect = 1.9e-38, Sum P(2) = 1.9e-38
Identities = 21/67 (31%), Positives = 26/67 (38%)
Query: 184 CQCKPGVTGDKCDRCDVNHY---DFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
C C G +G C+ C + G A C C CN G+ CD G C C
Sbjct: 680 CSCPSGYSGQFCESCAPGYKRETPLGGPYASCVPCICNQHGT------CDPNTGICLCGH 733
Query: 239 NVEGAQC 245
+ EG C
Sbjct: 734 HTEGPSC 740
>UNIPROTKB|F1MD77 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:DAAA02043571 EMBL:DAAA02043567
EMBL:DAAA02043568 EMBL:DAAA02043569 EMBL:DAAA02043570
IPI:IPI01018593 UniGene:Bt.19081 Ensembl:ENSBTAT00000015881
Uniprot:F1MD77
Length = 1608
Score = 424 (154.3 bits), Expect = 2.7e-38, P = 2.7e-38
Identities = 65/125 (52%), Positives = 87/125 (69%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG CE+CR+N+++ C+ C+C+
Sbjct: 341 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAKCERCRENFFRLGNREACSPCHCS 400
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC ++ EAGC+ C CNP+GS+ C+
Sbjct: 401 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSIDE---CNI 457
Query: 121 VKGQC 125
G+C
Sbjct: 458 ETGRC 462
Score = 337 (123.7 bits), Expect = 5.0e-29, P = 5.0e-29
Identities = 81/236 (34%), Positives = 112/236 (47%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNL--QCNS-EGRC-Q 76
C +C G CE C D ++ G N C C CN N CN G C +
Sbjct: 791 CTNCPTGTTGRRCELCDDGHFGDPLGSNGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLK 850
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C G CDRC + A C++C+CNP G+VK +C+ V GQCE
Sbjct: 851 CIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACDCNPYGTVKQQSSCNPVTGQCECLP-- 908
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPG 189
H R DP + + C+R D + LG S N QC+ G+C+C+PG
Sbjct: 909 -----HVTGRDCGA--CDPGFYNLQSGQGCERCDCHALG---STNGQCDVHSGQCECQPG 958
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+TG C+ C+VNH+ FG GCK C+C+P GS+ + C G+CEC++ G +C
Sbjct: 959 ITGQHCEHCEVNHFGFGPEGCKPCDCHPEGSL--SLQCKD-DGRCECREGFVGNRC 1011
Score = 321 (118.1 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 72/200 (36%), Positives = 103/200 (51%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C AC+CNP G++ Q CN G+C+
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACDCNPYGTVKQQSSCNPVTGQCE 905
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 906 CLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDVHSGQCE-CQPGITGQ 962
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 963 -HCEHCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1010
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1011 CDQCEENYFYNRSWPGCQEC 1030
Score = 315 (115.9 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 87/260 (33%), Positives = 115/260 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTAC 57
C CNG S C D E G C +C+ + GPNCEKC D YY S G + C C
Sbjct: 723 CTCNGHSETC--DPE-------SGVC-NCRDNTAGPNCEKCSDGYYGDSTAGTSLDCQPC 772
Query: 58 NCNPIGS--LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD H+ G G C+ C+CN
Sbjct: 773 PC-PGGSSCAVVPKTQEVVCTNCPTGTTGRRCELCDDGHFGDPLGSNGPVRLCRLCQCND 831
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP-AGNRIWDLRRCKRDTYP 167
NC+ + G+C ++ G + + R + +P A N R C D P
Sbjct: 832 NIDPNAVGNCNRLTGECLKCIYNTAG-FYCD-RCKDGFFGNPLAPNPADKCRAC--DCNP 887
Query: 168 LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 225
G + CN G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 888 YGTVKQQS-SCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG-- 944
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 945 QCDVHSGQCECQPGITGQHC 964
Score = 283 (104.7 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 79/225 (35%), Positives = 103/225 (45%)
Query: 37 NCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDRC--DV 91
N K +YY D F C CN S ++ + C CK G C++C
Sbjct: 264 NDPKVLKSYYYAISD-FAVGGRCKCNGHASECVKNEFDKLVCNCKHNTYGVDCEKCLPFF 322
Query: 92 NHYDFGEAGCKSC-ECNPAGSVKNTPNC--DSVK-------GQCESAQLSSRGRVHTELR 141
N + A +S EC P + C D G C + Q ++ G E
Sbjct: 323 NDRPWRRATAESASECQPCDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDG-AKCE-- 379
Query: 142 VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
+ R+NF GNR C P+G SL+ QC+S GRC CKPGV GDKCDRC
Sbjct: 380 -RCRENFFRLGNR----EACSPCHCSPVG---SLSTQCDSYGRCSCKPGVMGDKCDRCQP 431
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ EAGC+ C CNP+GS+ C+ G+C CKDNVEG C
Sbjct: 432 GYHSLTEAGCRPCSCNPSGSIDE---CNIETGRCVCKDNVEGFNC 473
Score = 210 (79.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 35/84 (41%), Positives = 52/84 (61%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
H G C +CQ G +CE C N++ G C C+C+P GSL+LQC +GRC+C+ G
Sbjct: 949 HSGQC-ECQPGITGQHCEHCEVNHFG-FGPEGCKPCDCHPEGSLSLQCKDDGRCECREGF 1006
Query: 82 TGDKCDRCDVNH-YDFGEAGCKSC 104
G++CD+C+ N+ Y+ GC+ C
Sbjct: 1007 VGNRCDQCEENYFYNRSWPGCQEC 1030
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C C+ G C++C+ Y+ + + C C+CNP GS++ +CN E GRC CK V
Sbjct: 413 GRC-SCKPGVMGDKCDRCQPGYHSLT-EAGCRPCSCNPSGSID-ECNIETGRCVCKDNVE 469
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
G C+RC ++ + GC C C SV
Sbjct: 470 GFNCERCKPGFFNLESSNPRGCTPCFCFGHSSV 502
Score = 123 (48.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 50/186 (26%), Positives = 72/186 (38%)
Query: 75 CQCKPGVTGDKCDRCDVNHY-----DFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C C G G C+ C ++ Y G + C C CN G ++ CD G C
Sbjct: 689 CTCPVGYGGQFCEVC-LSGYRRETPSLGPYSPCVLCTCN--G---HSETCDPESGVCNCR 742
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QC 186
++ G + E AG + D + C P G S + + E C C
Sbjct: 743 D-NTAGP-NCEKCSDGYYGDSTAGTSL-DCQPC-----PCPGGSSCAVVPKTQEVVCTNC 794
Query: 187 KPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKDN 239
G TG +C+ CD H+ G G C+ C+CN NC+ + G+C +C N
Sbjct: 795 PTGTTGRRCELCDDGHFGDPLGSNGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLKCIYN 854
Query: 240 VEGAQC 245
G C
Sbjct: 855 TAGFYC 860
Score = 76 (31.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEG 73
G C+ C+ + +G NCE+C+ ++ + S CT C C G ++ N+ G
Sbjct: 460 GRCV-CKDNVEGFNCERCKPGFFNLESSNPRGCTPCFC--FGHSSVCTNAVG 508
>UNIPROTKB|F1N0T1 [details] [associations]
symbol:Bt.54919 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0014002 GO:GO:0000904
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:QRGRRCE EMBL:DAAA02032247
EMBL:DAAA02032248 EMBL:DAAA02032249 EMBL:DAAA02032250
EMBL:DAAA02032251 EMBL:DAAA02032252 EMBL:DAAA02032253
EMBL:DAAA02032254 IPI:IPI00698418 Ensembl:ENSBTAT00000023245
Uniprot:F1N0T1
Length = 1585
Score = 367 (134.2 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
Identities = 60/125 (48%), Positives = 78/125 (62%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ +GHGG CL C+ GP+CE+C++N+Y+ S C C+C+
Sbjct: 340 CNCSGHSEECTFDRELFRSSGHGGRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPCDCH 399
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL LQC+ G C CKP V G KCDRC + E GC+ C CNP GS+ CD
Sbjct: 400 PAGSLRLQCDDLGTCVCKPTVMGWKCDRCLSGFHSLSEGGCRPCTCNPVGSLGT---CDP 456
Query: 121 VKGQC 125
G+C
Sbjct: 457 RSGRC 461
Score = 256 (95.2 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 78/219 (35%), Positives = 104/219 (47%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQC--NSEGR--CQCKPGVTGDKCDRCDVNHYD----- 95
YY S + C CN S +C + EGR C+C+ TG C+RC D
Sbjct: 272 YYAVSDFSVGGRCKCNGHAS---ECGPDEEGRLACRCQHNTTGTDCERCLPFFQDRPWAR 328
Query: 96 -FGEAGCKSCECNPAG-SVKNTPNCDSVK-----GQCESAQLSSRGRVHTELRVQSRKNF 148
EA + CN +G S + T + + + G+C + + G H E R Q +NF
Sbjct: 329 GTAEAANECLPCNCSGHSEECTFDRELFRSSGHGGRCLHCRAHTAGP-HCE-RCQ--ENF 384
Query: 149 DPAGNRIWDLRR-CKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 206
R W + C+ D +P GSL LQC+ G C CKP V G KCDRC +
Sbjct: 385 ----YR-WSPQTPCQPCDCHP---AGSLRLQCDDLGTCVCKPTVMGWKCDRCLSGFHSLS 436
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
E GC+ C CNP GS+ CD G+C CK+NVEG+ C
Sbjct: 437 EGGCRPCTCNPVGSLGT---CDPRSGRCHCKENVEGSLC 472
Score = 161 (61.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 32/86 (37%), Positives = 42/86 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ G C++C ++ S + C C CNP+GSL GRC CK V G
Sbjct: 412 GTCV-CKPTVMGWKCDRCLSGFHSLS-EGGCRPCTCNPVGSLGTCDPRSGRCHCKENVEG 469
Query: 84 DKCDRCDVNHYDF---GEAGCKSCEC 106
CDRC ++ AGC SC C
Sbjct: 470 SLCDRCRPGAFNLQPHNPAGCSSCFC 495
Score = 154 (59.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 42/141 (29%), Positives = 62/141 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKC----RDNYYQKS---GDNF 53
C CNG ++ C D+E G CQ + G +CE+C +D + + N
Sbjct: 284 CKCNGHASECGPDEE-------GRLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAANE 336
Query: 54 CTACNCNPIGS-------LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFG-EAGCKSC 104
C CNC+ L GRC C+ G C+RC N Y + + C+ C
Sbjct: 337 CLPCNCSGHSEECTFDRELFRSSGHGGRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPC 396
Query: 105 ECNPAGSVKNTPNCDSVKGQC 125
+C+PAGS++ CD + G C
Sbjct: 397 DCHPAGSLRL--QCDDL-GTC 414
Score = 87 (35.7 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
Identities = 22/67 (32%), Positives = 26/67 (38%)
Query: 184 CQCKPGVTGDKCDRCDVNHY---DFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
C C G TG C+ C + G A C C CN G+ CD G C C
Sbjct: 687 CSCPQGYTGQFCESCAPGYKRNTPLGGPYASCVPCTCNQHGT------CDPNTGVCLCGH 740
Query: 239 NVEGAQC 245
+ EG C
Sbjct: 741 HTEGPSC 747
Score = 69 (29.3 bits), Expect = 2.5e-36, Sum P(2) = 2.5e-36
Identities = 26/76 (34%), Positives = 32/76 (42%)
Query: 162 KRDTYPLG--HGGSLNLQCNSEGRCQCKPGVT-------GDKCDRCDVNHYD--F-GEAG 209
KR+T PLG + + CN G C GV G C+RC Y F G+A
Sbjct: 706 KRNT-PLGGPYASCVPCTCNQHGTCDPNTGVCLCGHHTEGPSCERCLPGFYGNPFTGQAD 764
Query: 210 -CKSCECNPAGSVKNT 224
C+ C C P S T
Sbjct: 765 DCQPCPC-PGQSACTT 779
>UNIPROTKB|P11047 [details] [associations]
symbol:LAMC1 "Laminin subunit gamma-1" species:9606 "Homo
sapiens" [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=NAS;TAS] [GO:0005615
"extracellular space" evidence=NAS] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0007492 "endoderm development" evidence=TAS]
[GO:0016477 "cell migration" evidence=IMP] [GO:0022617
"extracellular matrix disassembly" evidence=IMP] [GO:0006461
"protein complex assembly" evidence=IDA] [GO:0031581 "hemidesmosome
assembly" evidence=IMP] [GO:0005201 "extracellular matrix
structural constituent" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IDA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11
complex" evidence=TAS] [GO:0043259 "laminin-10 complex"
evidence=TAS] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=IDA] Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0005615 GO:GO:0016477
GO:GO:0006461 GO:GO:0070062 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0007492
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0050679
GO:GO:0031581 DrugBank:DB00015 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0005606 GO:GO:0043259 GO:GO:0043260
CleanEx:HS_LAMB2 CTD:3915 HOVERGEN:HBG100808 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS EMBL:J03202 EMBL:M55210 EMBL:M55217 EMBL:M55201
EMBL:M55211 EMBL:M55212 EMBL:M55213 EMBL:M55214 EMBL:M55215
EMBL:M55216 EMBL:M55192 EMBL:M55193 EMBL:M55194 EMBL:M55195
EMBL:M55196 EMBL:M55197 EMBL:M55198 EMBL:M55199 EMBL:M55200
EMBL:M55202 EMBL:M55203 EMBL:M55204 EMBL:M55205 EMBL:M55206
EMBL:M55207 EMBL:M55208 EMBL:M55209 EMBL:AL354953 EMBL:AL450304
EMBL:X13939 EMBL:M27654 IPI:IPI00298281 PIR:S13548
RefSeq:NP_002284.3 UniGene:Hs.609663 ProteinModelPortal:P11047
SMR:P11047 IntAct:P11047 MINT:MINT-1184520 STRING:P11047
PhosphoSite:P11047 DMDM:224471885 PaxDb:P11047 PRIDE:P11047
Ensembl:ENST00000258341 GeneID:3915 KEGG:hsa:3915 UCSC:uc001gpy.4
GeneCards:GC01P182992 H-InvDB:HIX0001405 HGNC:HGNC:6492
HPA:CAB004486 HPA:HPA001908 HPA:HPA001909 MIM:150290
neXtProt:NX_P11047 PharmGKB:PA30280 InParanoid:P11047
PhylomeDB:P11047 ChiTaRS:LAMC1 GenomeRNAi:3915 NextBio:15381
Bgee:P11047 CleanEx:HS_LAMC1 Genevestigator:P11047
GermOnline:ENSG00000135862 Uniprot:P11047
Length = 1609
Score = 422 (153.6 bits), Expect = 4.4e-38, P = 4.4e-38
Identities = 64/125 (51%), Positives = 89/125 (71%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +CQ + DG +CE+CR+N+++ + C++C+C+
Sbjct: 342 CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSSCHCS 401
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS+ C+
Sbjct: 402 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSIDE---CNI 458
Query: 121 VKGQC 125
G+C
Sbjct: 459 ETGRC 463
Score = 330 (121.2 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 81/236 (34%), Positives = 112/236 (47%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNL--QCNS-EGRC-Q 76
C +C G CE C D Y+ G N C C C+ N CN G C +
Sbjct: 792 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSDNIDPNAVGNCNRLTGECLK 851
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C G CDRC + A CK+C CN G++K +C+ V GQCE
Sbjct: 852 CIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCECLP-- 909
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPG 189
H + Q DP + + C+R D + LG S N QC+ G+C+C+PG
Sbjct: 910 -----H--VTGQDCGACDPGFYNLQSGQGCERCDCHALG---STNGQCDIRTGQCECQPG 959
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+TG C+RC+VNH+ FG GCK C+C+P GS+ + C G+CEC++ G +C
Sbjct: 960 ITGQHCERCEVNHFGFGPEGCKPCDCHPEGSL--SLQCKD-DGRCECREGFVGNRC 1012
Score = 319 (117.4 bits), Expect = 4.1e-27, P = 4.1e-27
Identities = 72/200 (36%), Positives = 102/200 (51%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C+D ++ + + C ACNCN G++ Q CN G+C+
Sbjct: 847 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCE 906
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P VTG C CD Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 907 CLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 963
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
H E + F P G CK D +P GSL+LQC +GRC+C+ G G++
Sbjct: 964 -HCERCEVNHFGFGPEG--------CKPCDCHP---EGSLSLQCKDDGRCECREGFVGNR 1011
Query: 195 CDRCDVNH-YDFGEAGCKSC 213
CD+C+ N+ Y+ GC+ C
Sbjct: 1012 CDQCEENYFYNRSWPGCQEC 1031
Score = 294 (108.6 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 83/262 (31%), Positives = 117/262 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTAC 57
C CNG S C D E G C +C+ + GP+CEKC D YY S G + C C
Sbjct: 724 CACNGHSETC--DPET-------GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPC 773
Query: 58 NCNPIGS--LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNP 108
C P GS + E C C G TG +C+ CD ++ G G C+ C+C+
Sbjct: 774 PC-PGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSD 832
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP-AGNRIWDLRRCKRDTYP 167
NC+ + G+C ++ G + + R + +P A N + C + Y
Sbjct: 833 NIDPNAVGNCNRLTGECLKCIYNTAG-FYCD-RCKDGFFGNPLAPNPADKCKACNCNLY- 889
Query: 168 LGHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKN 223
G++ Q CN G+C+C P VTG C CD Y+ GC+ C+C+ GS
Sbjct: 890 ----GTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNG 945
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 946 --QCDIRTGQCECQPGITGQHC 965
Score = 278 (102.9 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 78/225 (34%), Positives = 102/225 (45%)
Query: 37 NCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDRC--DV 91
N K +YY D F C CN S ++ + C CK G C++C
Sbjct: 265 NDPKVLKSYYYAISD-FAVGGRCKCNGHASECMKNEFDKLVCNCKHNTYGVDCEKCLPFF 323
Query: 92 NHYDFGEAGCKSC-ECNPAGSVKNTPNC--DSVK-------GQCESAQLSSRGRVHTELR 141
N + A +S EC P + C D G C + Q ++ G H E
Sbjct: 324 NDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDG-AHCE-- 380
Query: 142 VQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
+ R+NF GN C P+G SL+ QC+S GRC CKPGV GDKCDRC
Sbjct: 381 -RCRENFFRLGNN----EACSSCHCSPVG---SLSTQCDSYGRCSCKPGVMGDKCDRCQP 432
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ EAGC+ C C+P+GS+ C+ G+C CKDNVEG C
Sbjct: 433 GFHSLTEAGCRPCSCDPSGSIDE---CNIETGRCVCKDNVEGFNC 474
Score = 206 (77.6 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 51/146 (34%), Positives = 76/146 (52%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C +CQ G +CE+C N++ G C C+C+P GSL+LQC +GRC+C+ G G
Sbjct: 952 GQC-ECQPGITGQHCERCEVNHFG-FGPEGCKPCDCHPEGSLSLQCKDDGRCECREGFVG 1009
Query: 84 DKCDRCDVNH-YDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQ-CES--AQLSSRGRVHT 138
++CD+C+ N+ Y+ GC+ C C VK+ VK Q ES A L + + T
Sbjct: 1010 NRCDQCEENYFYNRSWPGCQECPACYRL--VKDKVADHRVKLQELESLIANLGTGDEMVT 1067
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRD 164
+ + R A + DL R +D
Sbjct: 1068 DQAFEDR--LKEAEREVMDLLREAQD 1091
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/93 (33%), Positives = 48/93 (51%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C C+ G C++C+ ++ + + C C+C+P GS++ +CN E GRC CK V
Sbjct: 414 GRC-SCKPGVMGDKCDRCQPGFHSLT-EAGCRPCSCDPSGSID-ECNIETGRCVCKDNVE 470
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
G C+RC ++ + GC C C SV
Sbjct: 471 GFNCERCKPGFFNLESSNPRGCTPCFCFGHSSV 503
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 72/247 (29%), Positives = 92/247 (37%)
Query: 21 GHGGH-CLDCQGD--RDGPN------CEKCRDNYYQKSGDNFCTACNC--NPIGSLNLQC 69
G+GG C C R+ PN C C N + ++ D CNC N G +C
Sbjct: 695 GYGGQFCEMCLSGYRRETPNLGPYSPCVLCACNGHSETCDPETGVCNCRDNTAGPHCEKC 754
Query: 70 NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC------KSCECN--PAGSV-KNTPNCDS 120
S+G T C C G + C K C P G+ K CD
Sbjct: 755 -SDGYYGDSTAGTSSDCQPCPCP----GGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDD 809
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
G L G V Q N DP N + + C R T G L N+
Sbjct: 810 --GYFGDP-LGRNGPVRLCRLCQCSDNIDP--NAVGN---CNRLT-----GECLKCIYNT 856
Query: 181 EG-RC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G C +CK G G+ N D CK+C CN G++K +C+ V GQCEC
Sbjct: 857 AGFYCDRCKDGFFGNPLAP---NPAD----KCKACNCNLYGTMKQQSSCNPVTGQCECLP 909
Query: 239 NVEGAQC 245
+V G C
Sbjct: 910 HVTGQDC 916
Score = 118 (46.6 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 49/186 (26%), Positives = 72/186 (38%)
Query: 75 CQCKPGVTGDKCDRCDVNHY-----DFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
C C G G C+ C ++ Y + G + C C CN G ++ CD G C
Sbjct: 690 CTCPVGYGGQFCEMC-LSGYRRETPNLGPYSPCVLCACN--G---HSETCDPETGVCNCR 743
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QC 186
++ G H E AG D + C P G S + + E C C
Sbjct: 744 D-NTAGP-HCEKCSDGYYGDSTAGTSS-DCQPC-----PCPGGSSCAVVPKTKEVVCTNC 795
Query: 187 KPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKDN 239
G TG +C+ CD ++ G G C+ C+C+ NC+ + G+C +C N
Sbjct: 796 PTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSDNIDPNAVGNCNRLTGECLKCIYN 855
Query: 240 VEGAQC 245
G C
Sbjct: 856 TAGFYC 861
Score = 76 (31.8 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEG 73
G C+ C+ + +G NCE+C+ ++ + S CT C C G ++ N+ G
Sbjct: 461 GRCV-CKDNVEGFNCERCKPGFFNLESSNPRGCTPCFC--FGHSSVCTNAVG 509
>MGI|MGI:1344394 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
MGI:MGI:1344394 GO:GO:0007601 GO:GO:0007155 PROSITE:PS00022
GO:GO:0060041 PROSITE:PS01186 EMBL:CH466542 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
HOVERGEN:HBG100808 CTD:10319 KO:K06247 OrthoDB:EOG498TZW
EMBL:AF083372 EMBL:AL928893 EMBL:BX511243 EMBL:BC096366
EMBL:AF079520 IPI:IPI00756854 RefSeq:NP_035966.2 UniGene:Mm.302362
ProteinModelPortal:Q9R0B6 SMR:Q9R0B6 STRING:Q9R0B6 PaxDb:Q9R0B6
PRIDE:Q9R0B6 Ensembl:ENSMUST00000028187 GeneID:23928 KEGG:mmu:23928
OMA:QRGRRCE NextBio:303725 Bgee:Q9R0B6 CleanEx:MM_LAMC3
Genevestigator:Q9R0B6 GermOnline:ENSMUSG00000026840 Uniprot:Q9R0B6
Length = 1581
Score = 379 (138.5 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 64/125 (51%), Positives = 78/125 (62%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+ELY TGHGGHC C+ GP+CE+C NYY+ S C C+C+
Sbjct: 336 CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDCH 395
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC++ G C CKP VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 396 PAGSLSLQCDNSGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCACNVAGSLGT---CDP 452
Query: 121 VKGQC 125
G C
Sbjct: 453 RSGNC 457
Score = 299 (110.3 bits), Expect = 5.4e-25, P = 5.4e-25
Identities = 75/221 (33%), Positives = 105/221 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD----NFCTA 56
C C+G + + N H GHCL C + G +CE CR+ +Y + + C
Sbjct: 822 CQCSGNVDL----NAVGNCDPHSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAP 877
Query: 57 CNCNPIGSLNLQ-CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVK 113
C+C+ GS++ + CN G+C C P V+G C RC YD GC+SC+C+P GS++
Sbjct: 878 CSCDLRGSVSEKTCNPVTGQCVCLPYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLE 937
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
N C GQC R V + + + F G I R C+ PLG S
Sbjct: 938 N--KCHPKTGQCPC-----RPGVTGQACDRCQLGF--FGFSIKGCRDCRCS--PLGAASS 986
Query: 174 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAGCKSC 213
QC+ C C+PG G KCDRC N + G+ GC+ C
Sbjct: 987 ---QCHENSTCVCRPGFVGYKCDRCQDNFFLADGDTGCQEC 1024
Score = 271 (100.5 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 73/236 (30%), Positives = 102/236 (43%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK--SGD-NFCTACNCNPIGSLNLQCNSEGR--C-QC 77
G CL C +GP+CE+C +Y SG + C C C P S G C C
Sbjct: 732 GICL-CGHHTEGPSCERCMPGFYGNAFSGRADDCQPCPC-PGQSACATIPESGDVVCTHC 789
Query: 78 KPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
PG G +C+ C+ + G +G C+ C+C+ + NCD G C +
Sbjct: 790 PPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVGNCDPHSGHCLRCLYN 849
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGV 190
+ G H E R+ F + + +C + L G CN G+C C P V
Sbjct: 850 TTG-AHCE---HCREGFYGSAVATRPVDKCAPCSCDL-RGSVSEKTCNPVTGQCVCLPYV 904
Query: 191 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+G C RC YD GC+SC+C+P GS++N C GQC C+ V G C
Sbjct: 905 SGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLEN--KCHPKTGQCPCRPGVTGQAC 958
Score = 262 (97.3 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 73/235 (31%), Positives = 99/235 (42%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQK----SG-DNFCTACNCNPIGSLNLQCNSE---GRC-Q 76
C C + G CE C D ++ SG C C C+ LN N + G C +
Sbjct: 786 CTHCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVGNCDPHSGHCLR 845
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C TG C+ C Y A C C C+ GSV C+ V GQC
Sbjct: 846 CLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEK-TCNPVTGQCVCLPYV 904
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGV 190
S GR + S +D R + CK +PLG SL +C+ + G+C C+PGV
Sbjct: 905 S-GRDCSRC---SPGFYDLQSGR--GCQSCK--CHPLG---SLENKCHPKTGQCPCRPGV 953
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
TG CDRC + + F GC+ C C+P G+ + C C C+ G +C
Sbjct: 954 TGQACDRCQLGFFGFSIKGCRDCRCSPLGAASS--QCHE-NSTCVCRPGFVGYKC 1005
Score = 254 (94.5 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 72/217 (33%), Positives = 100/217 (46%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYD--FGEAG 100
YY S + C CN S + N+ G+ C+C+ TG C+RC D +
Sbjct: 268 YYAVSDFSVGGRCKCNGHAS-ECEPNAAGQLACRCQHNTTGVDCERCLPFFQDRPWARGT 326
Query: 101 CKSC-ECNPAGSVKNTPNCDSVK---------GQCESAQLSSRGRVHTELRVQSRKNFDP 150
+ EC P ++ C + G C+ + + G H E + KN+
Sbjct: 327 AEDANECLPCNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGP-HCE---RCEKNY-- 380
Query: 151 AGNRIWDLRR-CKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
R W + C+ D +P GSL+LQC++ G C CKP VTG KCDRC + E
Sbjct: 381 --YR-WSPKTPCQPCDCHP---AGSLSLQCDNSGVCPCKPTVTGWKCDRCLPGFHSLSEG 434
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CN AGS+ CD G C CK+NVEG+ C
Sbjct: 435 GCRPCACNVAGSLGT---CDPRSGNCPCKENVEGSLC 468
Score = 170 (64.9 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 71/241 (29%), Positives = 90/241 (37%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQK--SGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPG 80
CL QG G CE C Y ++ G + C C CN G+ C+ + G C C
Sbjct: 685 CLCPQG-YTGQFCEFCALGYKREIPHGGPYANCIPCTCNQHGT----CDPNTGICLCGHH 739
Query: 81 VTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
G C+RC Y +G C+ C C + P V C RGR
Sbjct: 740 TEGPSCERCMPGFYGNAFSGRADDCQPCPCPGQSACATIPESGDVV--CTHCPPGQRGR- 796
Query: 137 HTELRVQSRKN-F--DPAG--NRIWDLRRCK-RDTYPLGHGGSLNLQCNSEGRC-QCKPG 189
R +S ++ F DP G RRC+ L G N +S G C +C
Sbjct: 797 ----RCESCEDGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVG--NCDPHS-GHCLRCLYN 849
Query: 190 VTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
TG C+ C Y A C C C+ GSV C+ V GQC C V G
Sbjct: 850 TTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEK-TCNPVTGQCVCLPYVSGRD 908
Query: 245 C 245
C
Sbjct: 909 C 909
Score = 153 (58.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 45/141 (31%), Positives = 67/141 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKC----RDNYYQK--SGD-NF 53
C CNG ++ C E N G C CQ + G +CE+C +D + + + D N
Sbjct: 280 CKCNGHASEC----EP-NAAGQLA-CR-CQHNTTGVDCERCLPFFQDRPWARGTAEDANE 332
Query: 54 CTACNCNPIGS-------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFG-EAGCKSC 104
C CNC+ L G CQ C+ TG C+RC+ N+Y + + C+ C
Sbjct: 333 CLPCNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPC 392
Query: 105 ECNPAGSVKNTPNCDSVKGQC 125
+C+PAGS+ + CD+ G C
Sbjct: 393 DCHPAGSL--SLQCDN-SGVC 410
Score = 135 (52.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 29/88 (32%), Positives = 38/88 (43%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
+ G C C+ G C++C ++ S + C C CN GSL G C CK V
Sbjct: 406 NSGVC-PCKPTVTGWKCDRCLPGFHSLS-EGGCRPCACNVAGSLGTCDPRSGNCPCKENV 463
Query: 82 TGDKCDRCDVNHYDF---GEAGCKSCEC 106
G CDRC ++ GC SC C
Sbjct: 464 EGSLCDRCRPGTFNLQPHNPVGCSSCFC 491
Score = 69 (29.3 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 24/94 (25%), Positives = 31/94 (32%)
Query: 170 HGGS----LNLQCNSEGRCQCKPGVT-------GDKCDRCDVNHYDFGEAG----CKSCE 214
HGG + CN G C G+ G C+RC Y +G C+ C
Sbjct: 709 HGGPYANCIPCTCNQHGTCDPNTGICLCGHHTEGPSCERCMPGFYGNAFSGRADDCQPCP 768
Query: 215 CNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCRS 247
C + P V C C G +C S
Sbjct: 769 CPGQSACATIPESGDVV--CTHCPPGQRGRRCES 800
>UNIPROTKB|F1MAA7 [details] [associations]
symbol:Lamc1 "Protein Lamc1" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0022617 "extracellular matrix disassembly" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0043259
"laminin-10 complex" evidence=IEA] RGD:621052 GO:GO:0016477
GO:GO:0006461 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 GO:GO:0031175 GO:GO:0031581 GO:GO:0022617
GO:GO:0005201 GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 CTD:3915 KO:K05635
OMA:EATDYPW IPI:IPI00363849 RefSeq:NP_446418.1 UniGene:Rn.7145
ProteinModelPortal:F1MAA7 Ensembl:ENSRNOT00000003605 GeneID:117036
KEGG:rno:117036 NextBio:619829 Uniprot:F1MAA7
Length = 1607
Score = 415 (151.1 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 64/125 (51%), Positives = 86/125 (68%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG CE+CR+N+++ C+ C+C+
Sbjct: 340 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCS 399
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+P+GS T C+
Sbjct: 400 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGS---TDECNV 456
Query: 121 VKGQC 125
G+C
Sbjct: 457 ETGRC 461
Score = 321 (118.1 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 80/236 (33%), Positives = 109/236 (46%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNL--QCNS-EGRC-Q 76
C C G CE C D Y+ G N C C CN N CN G C +
Sbjct: 790 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLK 849
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C G CDRC + A CK+C CNP G+V+ +C+ V GQC+
Sbjct: 850 CIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHV 909
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPG 189
S GR DP + + C+ D + LG S N QC+ G+C+C+PG
Sbjct: 910 S-GR--------DCGACDPGFYNLQSGQGCESCDCHALG---STNGQCDIRTGQCECQPG 957
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+TG C+RC+ NH+ FG GCK C+C+ GS+ + C G+CEC++ G +C
Sbjct: 958 ITGQHCERCETNHFGFGPEGCKPCDCHHEGSL--SLQCKD-DGRCECREGFVGNRC 1010
Score = 320 (117.7 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 71/199 (35%), Positives = 102/199 (51%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C++ ++ + + C AC CNP G++ Q CN G+CQ
Sbjct: 845 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQ 904
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V+G C CD Y+ GC+SC+C+ GS CD GQCE Q G+
Sbjct: 905 CLPHVSGRDCGACDPGFYNLQSGQGCESCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 961
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D C H GSL+LQC +GRC+C+ G G++C
Sbjct: 962 -HCERCETNHFGFGPEGCKPCD---CH-------HEGSLSLQCKDDGRCECREGFVGNRC 1010
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 1011 DQCEENYFYNRSWPGCQEC 1029
Score = 302 (111.4 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 85/264 (32%), Positives = 119/264 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTAC 57
C CNG S C D E G C DC+ + GP+CEKC D YY S G + C C
Sbjct: 722 CTCNGHSETC--DPET-------GVC-DCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPC 771
Query: 58 NCNPIGS--LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNP 108
C P GS + E C C G G +C+ CD ++ G G C+ C+CN
Sbjct: 772 PC-PGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND 830
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DP-AGNRIWDLRRCKRDT 165
NC+ + G+C ++ G + + + ++ F +P A N + C +
Sbjct: 831 NIDPNAVGNCNRLTGECLKCIYNTAG-FYCD---RCKEGFFGNPLAPNPADKCKACACNP 886
Query: 166 YPLGHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
Y G++ Q CN G+CQC P V+G C CD Y+ GC+SC+C+ GS
Sbjct: 887 Y-----GTVQQQSSCNPVTGQCQCLPHVSGRDCGACDPGFYNLQSGQGCESCDCHALGST 941
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 942 NG--QCDIRTGQCECQPGITGQHC 963
Score = 275 (101.9 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 77/227 (33%), Positives = 101/227 (44%)
Query: 37 NCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRC--D 90
N K +YY D F C CN S ++ N G+ C CK G C++C
Sbjct: 263 NDPKVLKSYYYAISD-FAVGGRCKCNGHASECVK-NEFGKLVCNCKHNTYGVDCEKCLPF 320
Query: 91 VNHYDFGEAGCKSC-ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD 149
N + A +S +C P +C+ +C R H R N D
Sbjct: 321 FNDRPWRRATAESANQCLPC-------DCNGRSQECYFDPELYRSTGHGGHCTNCRDNTD 373
Query: 150 PAGNRIWDLRRCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRC 198
A RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC
Sbjct: 374 GA-----KCERCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRC 428
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ EAGC+ C C+P+GS T C+ G+C CKDNVEG C
Sbjct: 429 QPGFHSLTEAGCRPCSCDPSGS---TDECNVETGRCVCKDNVEGFSC 472
Score = 147 (56.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 31/93 (33%), Positives = 47/93 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C C+ G C++C+ ++ + + C C+C+P GS + +CN E GRC CK V
Sbjct: 412 GRC-SCKPGVMGDKCDRCQPGFHSLT-EAGCRPCSCDPSGSTD-ECNVETGRCVCKDNVE 468
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
G C+RC ++ + GC C C SV
Sbjct: 469 GFSCERCKPGFFNLESSNPKGCTPCFCFGHSSV 501
Score = 114 (45.2 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 47/185 (25%), Positives = 68/185 (36%)
Query: 75 CQCKPGVTGDKCDRCDVNHY----DFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C C G G C+ C + G + C C CN G ++ CD G C+
Sbjct: 688 CTCPVGYGGQFCETCLPGYRRETPSLGPYSPCVLCTCN--G---HSETCDPETGVCDCRD 742
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCK 187
++ G H E G D + C P G S + + E C C
Sbjct: 743 -NTAGP-HCEKCSDGYYGDSTLGTSS-DCQPC-----PCPGGSSCAIVPKTKEVVCTHCP 794
Query: 188 PGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNV 240
G G +C+ CD ++ G G C+ C+CN NC+ + G+C +C N
Sbjct: 795 TGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNT 854
Query: 241 EGAQC 245
G C
Sbjct: 855 AGFYC 859
Score = 71 (30.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEG 73
G C+ C+ + +G +CE+C+ ++ + S CT C C G ++ N+ G
Sbjct: 459 GRCV-CKDNVEGFSCERCKPGFFNLESSNPKGCTPCFC--FGHSSVCTNAVG 507
>MGI|MGI:99914 [details] [associations]
symbol:Lamc1 "laminin, gamma 1" species:10090 "Mus musculus"
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=ISO]
[GO:0006461 "protein complex assembly" evidence=ISO] [GO:0007155
"cell adhesion" evidence=ISO] [GO:0016477 "cell migration"
evidence=ISO] [GO:0022617 "extracellular matrix disassembly"
evidence=ISO] [GO:0031012 "extracellular matrix" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IPI] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:99914 GO:GO:0016477
GO:GO:0006461 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_127416 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0043259 HOVERGEN:HBG100808
OrthoDB:EOG49GKFS EMBL:X05211 EMBL:J03484 EMBL:J02930 EMBL:J03749
IPI:IPI00400016 PIR:A28469 PIR:S55783 UniGene:Mm.1249 PDB:1KLO
PDB:1NPE PDB:1TLE PDB:4AQT PDBsum:1KLO PDBsum:1NPE PDBsum:1TLE
PDBsum:4AQT ProteinModelPortal:P02468 SMR:P02468 MINT:MINT-1031545
STRING:P02468 PhosphoSite:P02468 PaxDb:P02468 PRIDE:P02468
UCSC:uc007czu.1 InParanoid:P02468 EvolutionaryTrace:P02468
CleanEx:MM_LAMC1 Genevestigator:P02468
GermOnline:ENSMUSG00000026478 Uniprot:P02468
Length = 1607
Score = 403 (146.9 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 63/125 (50%), Positives = 84/125 (67%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S C+FD ELY TGHGGHC +C+ + DG CE+CR+N+++ C+ C+C+
Sbjct: 340 CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCS 399
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P+GSL+ QC+S GRC CKPGV GDKCDRC + EAGC+ C C+ GS T C+
Sbjct: 400 PVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDLRGS---TDECNV 456
Query: 121 VKGQC 125
G+C
Sbjct: 457 ETGRC 461
Score = 329 (120.9 bits), Expect = 3.5e-28, P = 3.5e-28
Identities = 81/236 (34%), Positives = 110/236 (46%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-QKSGDN----FCTACNCNPIGSLNL--QCNS-EGRC-Q 76
C C G CE C D Y+ G N C C CN N CN G C +
Sbjct: 790 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLK 849
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C G CDRC + A CK+C CNP G+V+ +C+ V GQC+
Sbjct: 850 CIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHV 909
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPG 189
S GR DP + + C+R D + LG S N QC+ G+C+C+PG
Sbjct: 910 S-GR--------DCGTCDPGYYNLQSGQGCERCDCHALG---STNGQCDIRTGQCECQPG 957
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+TG C+RC+ NH+ FG GCK C+C+ GS+ + C G+CEC++ G +C
Sbjct: 958 ITGQHCERCETNHFGFGPEGCKPCDCHHEGSL--SLQCKD-DGRCECREGFVGNRC 1010
Score = 318 (117.0 bits), Expect = 5.2e-27, P = 5.2e-27
Identities = 70/199 (35%), Positives = 102/199 (51%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTACNCNPIGSLNLQ--CNS-EGRCQ 76
G CL C + G C++C++ ++ + + C AC CNP G++ Q CN G+CQ
Sbjct: 845 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQ 904
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V+G C CD +Y+ GC+ C+C+ GS CD GQCE Q G+
Sbjct: 905 CLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGSTNG--QCDIRTGQCE-CQPGITGQ 961
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H E + F P G + D C H GSL+LQC +GRC+C+ G G++C
Sbjct: 962 -HCERCETNHFGFGPEGCKPCD---CH-------HEGSLSLQCKDDGRCECREGFVGNRC 1010
Query: 196 DRCDVNH-YDFGEAGCKSC 213
D+C+ N+ Y+ GC+ C
Sbjct: 1011 DQCEENYFYNRSWPGCQEC 1029
Score = 300 (110.7 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 84/264 (31%), Positives = 119/264 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTAC 57
C CNG S C D E G C DC+ + GP+CEKC D YY S G + C C
Sbjct: 722 CTCNGHSETC--DPET-------GVC-DCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPC 771
Query: 58 NCNPIGS--LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNP 108
C P GS + E C C G G +C+ CD ++ G G C+ C+CN
Sbjct: 772 PC-PGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND 830
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DP-AGNRIWDLRRCKRDT 165
NC+ + G+C ++ G + + + ++ F +P A N + C +
Sbjct: 831 NIDPNAVGNCNRLTGECLKCIYNTAG-FYCD---RCKEGFFGNPLAPNPADKCKACACNP 886
Query: 166 YPLGHGGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
Y G++ Q CN G+CQC P V+G C CD +Y+ GC+ C+C+ GS
Sbjct: 887 Y-----GTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGST 941
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
CD GQCEC+ + G C
Sbjct: 942 NG--QCDIRTGQCECQPGITGQHC 963
Score = 250 (93.1 bits), Expect = 9.0e-20, P = 9.0e-20
Identities = 72/224 (32%), Positives = 96/224 (42%)
Query: 37 NCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNH 93
N K +YY D F C CN S ++ + C CK G C++C
Sbjct: 263 NEPKVLKSYYYAISD-FAVGGRCKCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPF- 320
Query: 94 YDFGEAGCKSCECNPAGSVKNTP-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
F + + A ++ P +C+ +C R H R N D A
Sbjct: 321 --FNDRPWRRATAESAS--ESLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGA- 375
Query: 153 NRIWDLRRCKRDTYPLGHG-----------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
RC+ + + LG+ GSL+ QC+S GRC CKPGV GDKCDRC
Sbjct: 376 ----KCERCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPG 431
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ EAGC+ C C+ GS T C+ G+C CKDNVEG C
Sbjct: 432 FHSLTEAGCRPCSCDLRGS---TDECNVETGRCVCKDNVEGFNC 472
Score = 136 (52.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 30/93 (32%), Positives = 46/93 (49%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C C+ G C++C+ ++ + + C C+C+ GS + +CN E GRC CK V
Sbjct: 412 GRC-SCKPGVMGDKCDRCQPGFHSLT-EAGCRPCSCDLRGSTD-ECNVETGRCVCKDNVE 468
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSV 112
G C+RC ++ + GC C C SV
Sbjct: 469 GFNCERCKPGFFNLESSNPKGCTPCFCFGHSSV 501
Score = 114 (45.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 47/185 (25%), Positives = 68/185 (36%)
Query: 75 CQCKPGVTGDKCDRCDVNHY----DFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C C G G C+ C + G + C C CN G ++ CD G C+
Sbjct: 688 CTCPVGYGGQFCETCLPGYRRETPSLGPYSPCVLCTCN--G---HSETCDPETGVCDCRD 742
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCK 187
++ G H E G D + C P G S + + E C C
Sbjct: 743 -NTAGP-HCEKCSDGYYGDSTLGTSS-DCQPC-----PCPGGSSCAIVPKTKEVVCTHCP 794
Query: 188 PGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNV 240
G G +C+ CD ++ G G C+ C+CN NC+ + G+C +C N
Sbjct: 795 TGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNT 854
Query: 241 EGAQC 245
G C
Sbjct: 855 AGFYC 859
Score = 76 (31.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNSEG 73
G C+ C+ + +G NCE+C+ ++ + S CT C C G ++ N+ G
Sbjct: 459 GRCV-CKDNVEGFNCERCKPGFFNLESSNPKGCTPCFC--FGHSSVCTNAVG 507
>UNIPROTKB|A4D0S4 [details] [associations]
symbol:LAMB4 "Laminin subunit beta-4" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
EMBL:CH236947 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:22798 eggNOG:NOG303831 KO:K06245
EMBL:AF028816 EMBL:AC005048 EMBL:BC045172 EMBL:BC140804
EMBL:BC142619 EMBL:AK075165 IPI:IPI00295437 IPI:IPI00852842
IPI:IPI00927194 RefSeq:NP_031382.2 UniGene:Hs.62022
ProteinModelPortal:A4D0S4 SMR:A4D0S4 IntAct:A4D0S4 STRING:A4D0S4
PhosphoSite:A4D0S4 PaxDb:A4D0S4 PRIDE:A4D0S4
Ensembl:ENST00000205386 Ensembl:ENST00000388780
Ensembl:ENST00000388781 Ensembl:ENST00000422975 GeneID:22798
KEGG:hsa:22798 UCSC:uc003vey.2 GeneCards:GC07M107663 HGNC:HGNC:6491
HPA:HPA020242 HPA:HPA024247 neXtProt:NX_A4D0S4 PharmGKB:PA30279
OMA:CHPQGSK OrthoDB:EOG46DM1W ChiTaRS:LAMB4 GenomeRNAi:22798
NextBio:43142 ArrayExpress:A4D0S4 Bgee:A4D0S4 CleanEx:HS_LAMB4
Genevestigator:A4D0S4 Uniprot:A4D0S4
Length = 1761
Score = 291 (107.5 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 83/265 (31%), Positives = 113/265 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN F+ C D E G C +C G G NCE+C D YY S C C C
Sbjct: 863 CPCNRFAELC--DPET-------GSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Query: 60 NPIGSLNL----QC-----NSEGRCQCKPGVTGDKCDRCDVNHYD---FGEAGCKSCECN 107
S N C +S+ C C G TG +C C Y A C+ C CN
Sbjct: 914 PDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACN 973
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD 164
V + +C V G+C +++G ++ ++ A N+ RRC
Sbjct: 974 NNIDVTDPESCSRVTGECLRCLHNTQG---ANCQLCKPGHYGSALNQT--CRRCSCHASG 1028
Query: 165 TYPLG--HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGS 220
P+ GG L C+ G C C P VTG CDRC +++ GC+SC+C+P S
Sbjct: 1029 VSPMECPPGGGACL-CDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTS 1087
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD + GQC CK G +C
Sbjct: 1088 --QSSHCDQLTGQCPCKLGYGGKRC 1110
Score = 252 (93.8 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 68/215 (31%), Positives = 99/215 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN +N D E +R G CL C + G NC+ C+ +Y + + C C+C+
Sbjct: 970 CACN--NNIDVTDPESCSRVT--GECLRCLHNTQGANCQLCKPGHYGSALNQTCRRCSCH 1025
Query: 61 PIGSLNLQCNS----------EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPA 109
G ++C G C C P VTG CDRC +++ GC+SC+C+P
Sbjct: 1026 ASGVSPMECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPR 1085
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WDLRRCKRDTYPL 168
S + +CD + GQC +L G+ +E Q DP G I D C R
Sbjct: 1086 TS--QSSHCDQLTGQCP-CKLGYGGKRCSEC--QENYYGDPPGRCIPCD---CNR----- 1132
Query: 169 GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNH 202
G+ C+ + G C+C+ GV+G +CDRC H
Sbjct: 1133 --AGTQKPICDPDTGMCRCREGVSGQRCDRCARGH 1165
Score = 247 (92.0 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 68/232 (29%), Positives = 97/232 (41%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ G C++C Y G + C C+C+P GS + C+ G+C C V
Sbjct: 785 GGQC-QCKPLVVGRCCDRCSTGSYDL-GHHGCHPCHCHPQGSKDTVCDQVTGQCPCHGEV 842
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+G +CDRC + FG C C CN + CD G C + + GR + E
Sbjct: 843 SGRRCDRCLAGY--FGFPSCHPCPCNRFAEL-----CDPETGSCFNCGGFTTGR-NCERC 894
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYP---LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
+ +P+ + C D H NL +S+ C C G TG +C C
Sbjct: 895 IDGYYG-NPSSGQPCRPCLCPDDPSSNQYFAHSCYQNLW-SSDVICNCLQGYTGTQCGEC 952
Query: 199 DVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
Y A C+ C CN V + +C V G+C C N +GA C+
Sbjct: 953 STGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLRCLHNTQGANCQ 1004
Score = 237 (88.5 bits), Expect = 7.0e-36, Sum P(2) = 7.0e-36
Identities = 64/213 (30%), Positives = 96/213 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ---KS-GDNF- 53
C+CN S+RC FD Y +G GG C DCQ + +G +C++CR +Y+ K+ D +
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA 391
Query: 54 CTACNCNPIGSLNLQ-CNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C C+P G+++ C S G+C CK V G KCD+C NHY
Sbjct: 392 CIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLG 451
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+ + + P + LS H E + + GN + C
Sbjct: 452 CQPCDCNPLGSLPFLTCDVDTGQCLCLSYVTGAHCE---ECTVGYWGLGNHLHGCSPCDC 508
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC 195
D GG+ + C+ + G+C+C+P VTG C
Sbjct: 509 DI-----GGAYSNVCSPKNGQCECRPHVTGRSC 536
Score = 212 (79.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 70/259 (27%), Positives = 98/259 (37%)
Query: 1 CNC-NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK---SGDNFCTA 56
C C + S+ +F Y +C G C +C +Y SG C
Sbjct: 911 CLCPDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAP-CQP 969
Query: 57 CNCNP-IGSLNLQ-CNS-EGRC-QCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGS 111
C CN I + + C+ G C +C G C C HY C+ C C+ +G
Sbjct: 970 CACNNNIDVTDPESCSRVTGECLRCLHNTQGANCQLCKPGHYGSALNQTCRRCSCHASGV 1029
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL---RRCKR-DTYP 167
+ C G C ++ G V D + W+L R C+ D P
Sbjct: 1030 --SPMECPPGGGACLCDPVT--GACPCLPNVTGLA-CDRCADGYWNLVPGRGCQSCDCDP 1084
Query: 168 LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
S C+ G+C CK G G +C C N+Y C C+CN AG+ K P
Sbjct: 1085 RTSQSS---HCDQLTGQCPCKLGYGGKRCSECQENYYGDPPGRCIPCDCNRAGTQK--PI 1139
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD G C C++ V G +C
Sbjct: 1140 CDPDTGMCRCREGVSGQRC 1158
Score = 204 (76.9 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 43/98 (43%), Positives = 53/98 (54%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF 96
CE+ + K D AC C+P GS+ C+ G+CQCKP V G CDRC YD
Sbjct: 751 CERLIISMSAKLHDG-AVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDL 809
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQCES-AQLSSR 133
G GC C C+P GS K+T CD V GQC ++S R
Sbjct: 810 GHHGCHPCHCHPQGS-KDTV-CDQVTGQCPCHGEVSGR 845
Score = 200 (75.5 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 67/223 (30%), Positives = 92/223 (41%)
Query: 51 DNFCTACNCNPIGS-LNLQCN--------SEGRCQ-CKPGVTGDKCDRCDVNHY-----D 95
DN C +C+CN S + S G C+ C+ G CDRC Y
Sbjct: 326 DNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKT 385
Query: 96 FGEA-GCKSCECNPAGSVK-------NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+ C CEC+P G++ + P SV GQC + + Q + N
Sbjct: 386 ISDPYACIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCD-----QCKPN 440
Query: 148 FDPAGNRIWDLRRCKR-DTYPLGHGGSLN-LQCNSE-GRCQCKPGVTGDKCDRCDVNHYD 204
G D C+ D PLG SL L C+ + G+C C VTG C+ C V ++
Sbjct: 441 H--YGLSATDPLGCQPCDCNPLG---SLPFLTCDVDTGQCLCLSYVTGAHCEECTVGYWG 495
Query: 205 FGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G GC C+C+ G+ N C GQCEC+ +V G C
Sbjct: 496 LGNHLHGCSPCDCDIGGAYSNV--CSPKNGQCECRPHVTGRSC 536
Score = 197 (74.4 bits), Expect = 7.0e-36, Sum P(2) = 7.0e-36
Identities = 37/75 (49%), Positives = 43/75 (57%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS+ C+ G+CQCKP V G CDRC YD G GC C C+P GS K+T CD V
Sbjct: 775 GSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQGS-KDTV-CDQV 832
Query: 231 KGQCECKDNVEGAQC 245
GQC C V G +C
Sbjct: 833 TGQCPCHGEVSGRRC 847
Score = 171 (65.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 75/245 (30%), Positives = 100/245 (40%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC----NSEG-RCQ-C 77
G C C G + +CR + GD F +P G ++ QC N++G C+ C
Sbjct: 263 GSCF-CNG-----HASECRPMQKMR-GDVF------SPPGMVHGQCVCQHNTDGPNCERC 309
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS---VKNTPNCDS---VKGQCESAQLS 131
K D R D + C+SC CN S T S G CE Q +
Sbjct: 310 KDFFQ-DAPWRPAA---DLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHN 365
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRC-KRDTYPLGH-GGSLNLQCNSE------GR 183
+ G+ H + R + DP I D C + P G G + + + G+
Sbjct: 366 TEGQ-HCD-RCRPLFYRDPL-KTISDPYACIPCECDPDGTISGGICVSHSDPALGSVAGQ 422
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
C CK V G KCD+C NHY GC+ C+CNP GS+ CD GQC C V
Sbjct: 423 CLCKENVEGAKCDQCKPNHYGLSATDPLGCQPCDCNPLGSLPFL-TCDVDTGQCLCLSYV 481
Query: 241 EGAQC 245
GA C
Sbjct: 482 TGAHC 486
Score = 131 (51.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 68/270 (25%), Positives = 111/270 (41%)
Query: 1 CNCNGFSNRCF-FDK---ELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSG---- 50
C CNG ++ C K ++++ G HG C+ CQ + DGPNCE+C+D ++Q +
Sbjct: 265 CFCNGHASECRPMQKMRGDVFSPPGMVHG-QCV-CQHNTDGPNCERCKD-FFQDAPWRPA 321
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
DN C +C+CN S +C+ + G++G C+ C H G+ C C
Sbjct: 322 ADLQDNACRSCSCNSHSS---RCHFDMTTYLASGGLSGGVCEDCQ--HNTEGQH-CDRCR 375
Query: 106 C----NPAGSVKNTPNCDSVKGQCESAQLSSRGRV--HTELRVQSRKNFDPAGNRIWDLR 159
+P ++ + C + +C+ S G H++ + S + +
Sbjct: 376 PLFYRDPLKTISDPYAC--IPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAK 433
Query: 160 --RCKRDTYPLGHGGSLNLQ---CNSEGRCQCKPGVTGD-KCDRCDVNHYDFGEAGCKSC 213
+CK + Y L L Q CN G P +T D +C Y G A C+ C
Sbjct: 434 CDQCKPNHYGLSATDPLGCQPCDCNPLGSL---PFLTCDVDTGQCLCLSYVTG-AHCEEC 489
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
G + C C+C ++ GA
Sbjct: 490 TVGYWGLGNHLHGCSP----CDC--DIGGA 513
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 49/173 (28%), Positives = 72/173 (41%)
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
P V C+R ++ G +C+C+P GSV ++ C + GQC+ L GR
Sbjct: 744 PQVLPGACERLIISMSAKLHDGAVACKCHPQGSVGSS--CSRLGGQCQCKPLVV-GRCCD 800
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
S ++D G+ C +P G S + C+ G+C C V+G +CDR
Sbjct: 801 RC---STGSYD-LGHHGCHPCHC----HPQG---SKDTVCDQVTGQCPCHGEVSGRRCDR 849
Query: 198 CDVNHYDFGEAGCKSCECNPAGSV--KNTPNCDSVKG-----QCE-CKDNVEG 242
C + FG C C CN + T +C + G CE C D G
Sbjct: 850 CLAGY--FGFPSCHPCPCNRFAELCDPETGSCFNCGGFTTGRNCERCIDGYYG 900
Score = 91 (37.1 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
P V C+R ++ G +C+C+P GSV ++ C + GQC+CK V G C
Sbjct: 744 PQVLPGACERLIISMSAKLHDGAVACKCHPQGSVGSS--CSRLGGQCQCKPLVVGRCC 799
>MGI|MGI:1918264 [details] [associations]
symbol:Megf9 "multiple EGF-like-domains 9" species:10090
"Mus musculus" [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001368
SMART:SM00208 MGI:MGI:1918264 GO:GO:0016021 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 CTD:1955 eggNOG:NOG302694
HOVERGEN:HBG080442 EMBL:AK035987 EMBL:AK039319 EMBL:AK052434
EMBL:AK122378 IPI:IPI00221701 RefSeq:NP_766282.1 UniGene:Mm.251188
ProteinModelPortal:Q8BH27 SMR:Q8BH27 STRING:Q8BH27
PhosphoSite:Q8BH27 PaxDb:Q8BH27 PRIDE:Q8BH27
Ensembl:ENSMUST00000107359 GeneID:230316 KEGG:mmu:230316
GeneTree:ENSGT00680000100051 HOGENOM:HOG000203602 InParanoid:Q8BH27
OMA:NGCLPCQ NextBio:379877 Bgee:Q8BH27 CleanEx:MM_MEGF9
Genevestigator:Q8BH27 GermOnline:ENSMUSG00000039270 Uniprot:Q8BH27
Length = 600
Score = 380 (138.8 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 81/249 (32%), Positives = 122/249 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ + D + N+T G C DC G +C+ C++ +Y C C+C+
Sbjct: 202 CNCSEVGS---LDVKRCNQTT--GQC-DCHVGYQGLHCDTCKEGFYLNHTVGLCLPCHCS 255
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P G++++ CNS G CQCK GVTG CD+C HY FG+ GC C+CN + +CD
Sbjct: 256 PHGAVSILCNSSGNCQCKVGVTGSMCDKCQDGHYGFGKTGCLPCQCN-----NRSDSCDV 310
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS 180
G C + Q +S+G H E + ++ F P+ + RC + G+ ++
Sbjct: 311 HTGACLNCQENSKGE-HCE---ECKEGFYPSPDAAKQCHRCPCSA--VTSTGNCTIESGE 364
Query: 181 -EGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQC-EC 236
E C QCK G TG C++C+ +Y+ ++ C CEC+ TP C G+C C
Sbjct: 365 LEPTCDQCKDGYTGQNCNKCENGYYN-SDSICTQCECHGHVDPIKTPKICKPESGECINC 423
Query: 237 KDNVEGAQC 245
N G C
Sbjct: 424 LHNTTGFWC 432
>WB|WBGene00002248 [details] [associations]
symbol:lam-3 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0030155 GO:GO:0010171
GO:GO:0040011 GO:GO:0040018 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
HSSP:P02468 Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 KO:K05637 GO:GO:0005606 EMBL:Z81125
EMBL:AF074902 EMBL:AL008585 PIR:F87908 PIR:T23064 PIR:T43291
RefSeq:NP_492775.2 UniGene:Cel.19655 ProteinModelPortal:G5ECE3
SMR:G5ECE3 EnsemblMetazoa:T22A3.8 GeneID:172952
KEGG:cel:CELE_T22A3.8 CTD:172952 WormBase:T22A3.8 OMA:TAINEAH
NextBio:877661 Uniprot:G5ECE3
Length = 3102
Score = 387 (141.3 bits), Expect = 5.6e-34, P = 5.6e-34
Identities = 86/251 (34%), Positives = 129/251 (51%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CNG + + N G CL C G G +CE C+++++ + + C C C+
Sbjct: 889 CTCNGNID----PMGIGNCDSETGKCLKCIGHTTGDSCESCKEHHWGNAQLHTCKPCGCH 944
Query: 61 PIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
G++N QC+ E G C+CK G +CDRC NH D E GC +C+CN GS+ + +CD
Sbjct: 945 TQGAVNPQCSEENGECECKENYIGAQCDRCKENHGDV-ENGCPACDCNDTGSIGS--DCD 1001
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL-NLQC 178
V GQC Q G+ + R S NF AG + C + Y GS+ + +C
Sbjct: 1002 QVSGQCNCKQ-GVFGKQCDQCR-PSYFNFTDAGCQF-----CHCNIY-----GSIEDGKC 1049
Query: 179 N-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+ + G+C+C+ V G C++C +++ GC+ C C+P GS +C+ V GQC C
Sbjct: 1050 DQTTGKCECRENVEGTMCEKCADGYFNITSGDGCEDCGCDPTGS--EDVSCNLVTGQCVC 1107
Query: 237 KDNVEGAQCRS 247
K V G +C S
Sbjct: 1108 KPGVTGLKCDS 1118
Score = 369 (135.0 bits), Expect = 4.5e-32, P = 4.5e-32
Identities = 83/227 (36%), Positives = 118/227 (51%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C +C+ + G C++C++N+ +N C AC+CN GS+ C+ G+C CK GV
Sbjct: 958 GEC-ECKENYIGAQCDRCKENHGDV--ENGCPACDCNDTGSIGSDCDQVSGQCNCKQGVF 1014
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CD+C ++++F +AGC+ C CN GS+++ CD G+CE + + G + E
Sbjct: 1015 GKQCDQCRPSYFNFTDAGCQFCHCNIYGSIEDG-KCDQTTGKCECRE-NVEGTM-CEKCA 1071
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
N +G+ D C D P G S ++ CN G+C CKPGVTG KCD C N
Sbjct: 1072 DGYFNIT-SGDGCED---CGCD--PTG---SEDVSCNLVTGQCVCKPGVTGLKCDSCLPN 1122
Query: 202 HYDFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
Y GC CE PA G V CD + G C C N G C +
Sbjct: 1123 FYGLTSEGCTECEPCPAPGQV-----CDPIDGSCVCPPNTVGEMCEN 1164
Score = 341 (125.1 bits), Expect = 4.3e-29, P = 4.3e-29
Identities = 75/228 (32%), Positives = 115/228 (50%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN----PIGSLNLQCNSE-GRC-QCKP 79
C++C +G CE C D +++ C C CN P+G N C+SE G+C +C
Sbjct: 858 CINCPLGYEGNKCEYCSDGFFEDPLTGKCIECTCNGNIDPMGIGN--CDSETGKCLKCIG 915
Query: 80 GVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
TGD C+ C +H+ + CK C C+ G+V P C G+CE + +
Sbjct: 916 HTTGDSCESCKEHHWGNAQLHTCKPCGCHTQGAVN--PQCSEENGECECKE----NYIGA 969
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
+ + ++N N C DT GS+ C+ G+C CK GV G +CD+
Sbjct: 970 QCD-RCKENHGDVENGC-PACDCN-DT------GSIGSDCDQVSGQCNCKQGVFGKQCDQ 1020
Query: 198 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C ++++F +AGC+ C CN GS+++ CD G+CEC++NVEG C
Sbjct: 1021 CRPSYFNFTDAGCQFCHCNIYGSIEDG-KCDQTTGKCECRENVEGTMC 1067
Score = 335 (123.0 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 85/232 (36%), Positives = 115/232 (49%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ-KSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C +C+ + +G CEKC D Y+ SGD C C C+P GS ++ CN G+C CKPGV
Sbjct: 1054 GKC-ECRENVEGTMCEKCADGYFNITSGDG-CEDCGCDPTGSEDVSCNLVTGQCVCKPGV 1111
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
TG KCD C N Y GC CE PA G V CD + G C ++ G + E
Sbjct: 1112 TGLKCDSCLPNFYGLTSEGCTECEPCPAPGQV-----CDPIDGSCVCPP-NTVGEM-CEN 1164
Query: 141 RVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
+ ++ P L CK D +G G + CN+ G+C+CK G KCD C
Sbjct: 1165 CTTNAWDYHP-------LNGCKLCDCSDIGSDGGM---CNTFTGQCKCKAAYVGLKCDLC 1214
Query: 199 DVNHYDFGEAGCKSCECNPAGS----VKNTPN-CDSVKGQCECKDNVEGAQC 245
++F C+ C CN AG+ K+ C+ + G+C CK NV G +C
Sbjct: 1215 THGFFNFPT--CEPCGCNAAGTDPLQCKDGQCLCNEI-GECPCKKNVHGTKC 1263
Score = 243 (90.6 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 83/268 (30%), Positives = 117/268 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGD-NFCTA 56
C+C+G S C + + G CL+C+ + G CE C+ + + G+ C
Sbjct: 774 CDCHGNSEEC----DPFT-----GECLNCRHNTTGSRCELCKPGHVGNPSRGGELGACEQ 824
Query: 57 CNCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGS 111
C C P SL+L N E C + V G D N+ G G K CE G
Sbjct: 825 CEC-P--SLDLNPNPE--CISTELAVLGSVASNED-NYVCINCPLGYEGNK-CEYCSDGF 877
Query: 112 VKN--TPNCD--SVKGQCESAQL----SSRGRVHTELRVQSRKNFDPAGNRIW---DLRR 160
++ T C + G + + S G+ + + + + W L
Sbjct: 878 FEDPLTGKCIECTCNGNIDPMGIGNCDSETGKCLKCIGHTTGDSCESCKEHHWGNAQLHT 937
Query: 161 CKRDTYPLG-HG-GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
CK P G H G++N QC+ E G C+CK G +CDRC NH D E GC +C+CN
Sbjct: 938 CK----PCGCHTQGAVNPQCSEENGECECKENYIGAQCDRCKENHGDV-ENGCPACDCND 992
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS+ + +CD V GQC CK V G QC
Sbjct: 993 TGSIGS--DCDQVSGQCNCKQGVFGKQC 1018
Score = 240 (89.5 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 53/151 (35%), Positives = 78/151 (51%)
Query: 1 CNCNGFSNRCFFDKEL----YNRTGHG-----GHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
C C ++ C +D EL ++ T G G CL+C + +G NCE+C+D YY+ SG
Sbjct: 353 CQCFNHAHSCVYDDELDRNKWSITPEGVYEGGGRCLECAHNTEGFNCERCKDGYYRPSGL 412
Query: 51 ----DNFCTACNCNPIGSLNLQC--------NSE--GRCQCKPGVTGDKCDRCDVNHYDF 96
++ C C C+P+GS++ C N + G C CKPG G +C+RC + +
Sbjct: 413 SHYREDACRTCECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGYRN- 471
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C+ C CN AGSV N CD QC++
Sbjct: 472 -HPTCEPCPCNRAGSV-NFDTCDGASCQCKA 500
Score = 232 (86.7 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 70/246 (28%), Positives = 107/246 (43%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNS-EGRC-QC 77
G +C + G +CE C Y + + + C C+C+ G+ +C+ G C C
Sbjct: 737 GVEVCECPENFAGNSCESCVPGYRRVNNQLYGGRCEKCDCH--GNSE-ECDPFTGECLNC 793
Query: 78 KPGVTGDKCDRCDVNHYDF----GEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
+ TG +C+ C H GE G C+ CEC P+ + P C S + + S+
Sbjct: 794 RHNTTGSRCELCKPGHVGNPSRGGELGACEQCEC-PSLDLNPNPECISTELAVLGSVASN 852
Query: 133 RGR---VHTELRVQSRK-NFDPAGNRIWDLR------RCKRDTYPLGHGGSLNLQCNSE- 181
++ L + K + G L C + P+G G C+SE
Sbjct: 853 EDNYVCINCPLGYEGNKCEYCSDGFFEDPLTGKCIECTCNGNIDPMGIGN-----CDSET 907
Query: 182 GRC-QCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C +C TGD C+ C +H+ + CK C C+ G+V P C G+CECK+N
Sbjct: 908 GKCLKCIGHTTGDSCESCKEHHWGNAQLHTCKPCGCHTQGAVN--PQCSEENGECECKEN 965
Query: 240 VEGAQC 245
GAQC
Sbjct: 966 YIGAQC 971
Score = 228 (85.3 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 67/224 (29%), Positives = 96/224 (42%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN-CNPIGSLNLQCNS-EGRCQCKPGV 81
G C+ C+ G C+ C N+Y + + CT C C G + C+ +G C C P
Sbjct: 1103 GQCV-CKPGVTGLKCDSCLPNFYGLTSEG-CTECEPCPAPGQV---CDPIDGSCVCPPNT 1157
Query: 82 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G+ C+ C N +D+ GCK C+C+ GS + C++ GQC+ + + G + +L
Sbjct: 1158 VGEMCENCTTNAWDYHPLNGCKLCDCSDIGS--DGGMCNTFTGQCK-CKAAYVG-LKCDL 1213
Query: 141 RVQSRKNF---DPAG-NRIW-DLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
NF +P G N D +CK G L CN G C CK V G KC
Sbjct: 1214 CTHGFFNFPTCEPCGCNAAGTDPLQCK-------DGQCL---CNEIGECPCKKNVHGTKC 1263
Query: 196 DRCDVNHYDFGEAGCKSC-ECNPAGSVKNTPNCDSVKGQCECKD 238
D+C + + K C EC N D V Q +D
Sbjct: 1264 DQCGEGTFSLDSSNLKGCTECFCFNRTSNCEQSDLVWQQMYAED 1307
Score = 181 (68.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 47/139 (33%), Positives = 64/139 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C+C+G S C D + C DC+ + G CE C Y ++ G N CT C
Sbjct: 1540 CSCHGHSQTCNPDTSV---------CTDCEHNTFGDFCEHCLPGYIGDAREGGANACTKC 1590
Query: 58 NCNPI-GSLNLQCNS--EGR---CQ-CKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECN 107
C + S + C + GR C CKPG TG C+ C +Y D G C C+C+
Sbjct: 1591 ACPLVENSFSDSCVAVDHGRGYVCNSCKPGYTGQYCETCVAGYYGDPQHIGGTCSPCDCH 1650
Query: 108 PAGSVKNTPNCDSVKGQCE 126
P GS+ C+ + GQCE
Sbjct: 1651 PDGSLHGA--CNPLSGQCE 1667
Score = 176 (67.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 42/109 (38%), Positives = 51/109 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C C N F D + G G C C+ G CE C YY Q G C+ C
Sbjct: 1590 CACPLVENS-FSDSCVAVDHGRGYVCNSCKPGYTGQYCETCVAGYYGDPQHIGGT-CSPC 1647
Query: 58 NCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+C+P GSL+ CN G+C+CKPGVTG C C H F C SC+
Sbjct: 1648 DCHPDGSLHGACNPLSGQCECKPGVTGRTCSMCQERHA-FINRVCTSCD 1695
Score = 171 (65.3 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 69/240 (28%), Positives = 90/240 (37%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG-SLNLQCNSEGRCQCKPGV 81
GG C+ C G + E C + +G C C N G S N C + KPG
Sbjct: 293 GGQCI-CYG-----HAESCPSD--PVTGQFKCE-CRHNTCGESCNRCCPLFNQLPWKPGT 343
Query: 82 TG--DKCDRCDV-NH-----YDFGEAGCKSCECNPAGSVKNTPNC----DSVKG----QC 125
+ C +C NH YD E P G + C + +G +C
Sbjct: 344 NSHPNVCQQCQCFNHAHSCVYD-DELDRNKWSITPEGVYEGGGRCLECAHNTEGFNCERC 402
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQ 185
+ G H DP G+ + D C RD +G G C
Sbjct: 403 KDGYYRPSGLSHYREDACRTCECDPVGS-VSDA--CVRDDQSAENG-------QKPGDCI 452
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CKPG G +C+RC + + C+ C CN AGSV N CD C+CK NVEG C
Sbjct: 453 CKPGFGGRRCERCAPGYRN--HPTCEPCPCNRAGSV-NFDTCDGAS--CQCKANVEGIYC 507
Score = 144 (55.7 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 30/71 (42%), Positives = 37/71 (52%)
Query: 178 CNSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC 234
CNS CKPG TG C+ C +Y D G C C+C+P GS+ C+ + GQC
Sbjct: 1614 CNS-----CKPGYTGQYCETCVAGYYGDPQHIGGTCSPCDCHPDGSLHGA--CNPLSGQC 1666
Query: 235 ECKDNVEGAQC 245
ECK V G C
Sbjct: 1667 ECKPGVTGRTC 1677
Score = 144 (55.7 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 35/112 (31%), Positives = 43/112 (38%)
Query: 1 CNCN---GFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTAC 57
C C+ S+ C D + G C+ C+ G CE+C Y C C
Sbjct: 423 CECDPVGSVSDACVRDDQSAENGQKPGDCI-CKPGFGGRRCERCAPGYRNHPT---CEPC 478
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN--HYDFGEA-GCKSCEC 106
CN GS+N CQCK V G CDRC H GC+ C C
Sbjct: 479 PCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKAGTIHLSASNPLGCQPCFC 530
Score = 143 (55.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 59/210 (28%), Positives = 82/210 (39%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVT-- 82
CL C G +C+ YY+K + + + + C+ G Q C P +
Sbjct: 1497 CLGCPQGYTGLSCQNPEVGYYRKKHREYLNQADDIALIGWSEPCSCHGHSQTCNPDTSVC 1556
Query: 83 --------GDKCDRCDVNHY-DFGEAG---CKSCECNPAGSVKNTPNCDSV---KGQ-CE 126
GD C+ C + D E G C C C P + +C +V +G C
Sbjct: 1557 TDCEHNTFGDFCEHCLPGYIGDAREGGANACTKCAC-PLVENSFSDSCVAVDHGRGYVCN 1615
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRC 184
S + G+ + E V DP I C D +P GSL+ CN G+C
Sbjct: 1616 SCKPGYTGQ-YCETCVAGYYG-DP--QHIGGT--CSPCDCHP---DGSLHGACNPLSGQC 1666
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
+CKPGVTG C C H F C SC+
Sbjct: 1667 ECKPGVTGRTCSMCQERHA-FINRVCTSCD 1695
Score = 142 (55.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 44/153 (28%), Positives = 59/153 (38%)
Query: 73 GRC-QCKPGVTGDKCDRCDVNHY------DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
GRC +C G C+RC +Y + E C++CEC+P GSV + C
Sbjct: 385 GRCLECAHNTEGFNCERCKDGYYRPSGLSHYREDACRTCECDPVGSVSDA--CVRDDQSA 442
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQ 185
E+ Q + + P G R + C + P GS+N CQ
Sbjct: 443 ENGQKPGDCICKPGFGGRRCERCAP-GYR--NHPTC--EPCPCNRAGSVNFDTCDGASCQ 497
Query: 186 CKPGVTGDKCDRCDVN--HYDFGEA-GCKSCEC 215
CK V G CDRC H GC+ C C
Sbjct: 498 CKANVEGIYCDRCKAGTIHLSASNPLGCQPCFC 530
Score = 140 (54.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 47/191 (24%), Positives = 74/191 (38%)
Query: 75 CQCKPGVTGDKCDRC-----DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+C G+ C+ C VN+ +G C+ C+C+ G N+ CD G+C + +
Sbjct: 741 CECPENFAGNSCESCVPGYRRVNNQLYG-GRCEKCDCH--G---NSEECDPFTGECLNCR 794
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS--------LNLQCNSE 181
++ G EL G + +C+ + L L ++E
Sbjct: 795 HNTTGS-RCELCKPGHVGNPSRGGELGACEQCECPSLDLNPNPECISTELAVLGSVASNE 853
Query: 182 GR--C-QCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQC-EC 236
C C G G+KC+ C ++ G C C CN NCDS G+C +C
Sbjct: 854 DNYVCINCPLGYEGNKCEYCSDGFFEDPLTGKCIECTCNGNIDPMGIGNCDSETGKCLKC 913
Query: 237 KDNVEGAQCRS 247
+ G C S
Sbjct: 914 IGHTTGDSCES 924
>UNIPROTKB|O75445 [details] [associations]
symbol:USH2A "Usherin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0050953 "sensory perception of light stimulus"
evidence=IMP] [GO:0005518 "collagen binding" evidence=IDA]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0048496
"maintenance of organ identity" evidence=IMP] [GO:0045494
"photoreceptor cell maintenance" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0035315 "hair cell differentiation" evidence=ISS]
[GO:0060113 "inner ear receptor cell differentiation" evidence=ISS]
[GO:0017022 "myosin binding" evidence=ISS] [GO:0002142 "stereocilia
ankle link complex" evidence=ISS] [GO:0016324 "apical plasma
membrane" evidence=ISS] [GO:0032421 "stereocilium bundle"
evidence=ISS] [GO:0060171 "stereocilium membrane" evidence=ISS]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 Orphanet:791 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 GO:GO:0017022 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113
Pfam:PF02210 GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 EMBL:AL445650 Orphanet:231178
GO:GO:0002142 GO:GO:0048496 EMBL:AC092799 GO:GO:0060171
InterPro:IPR006558 SMART:SM00560 EMBL:AF055580 EMBL:AF091889
EMBL:AF091873 EMBL:AF091875 EMBL:AF091876 EMBL:AF091874
EMBL:AF091877 EMBL:AF091879 EMBL:AF091881 EMBL:AF091883
EMBL:AF091888 EMBL:AF091887 EMBL:AF091886 EMBL:AF091885
EMBL:AF091884 EMBL:AF091882 EMBL:AF091880 EMBL:AF091878
EMBL:AY481573 EMBL:AC138024 EMBL:AL358858 EMBL:AC093581
EMBL:AC119429 EMBL:AL139259 EMBL:AL358452 EMBL:AL513305
IPI:IPI00289540 IPI:IPI00410150 IPI:IPI00741527 RefSeq:NP_009054.5
RefSeq:NP_996816.2 UniGene:Hs.655974 ProteinModelPortal:O75445
STRING:O75445 PhosphoSite:O75445 PaxDb:O75445 PRIDE:O75445
Ensembl:ENST00000307340 Ensembl:ENST00000366942
Ensembl:ENST00000366943 GeneID:7399 KEGG:hsa:7399 UCSC:uc001hku.1
UCSC:uc001hkv.3 CTD:7399 GeneCards:GC01M215796 H-InvDB:HIX0028527
HGNC:HGNC:12601 MIM:276901 MIM:608400 MIM:613809 neXtProt:NX_O75445
PharmGKB:PA37228 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 GenomeRNAi:7399
NextBio:28962 Bgee:O75445 CleanEx:HS_USH2A Genevestigator:O75445
GermOnline:ENSG00000042781 InterPro:IPR026915
PANTHER:PTHR10574:SF53 Uniprot:O75445
Length = 5202
Score = 386 (140.9 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 86/263 (32%), Positives = 131/263 (49%)
Query: 1 CNCNGFSNRCFFDKEL----YNR-TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-D--- 51
C CN S C ++ + + G GG C DC+ + G NCE C+D ++++ G D
Sbjct: 575 CQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGADPSA 634
Query: 52 -NFCTACNCNPIGSLN--LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C C+C+ +G+ N + C+ G+C CK V+G +C++C Y+ E GC C
Sbjct: 635 IDVCKPCDCDTVGTRNGSILCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPC 694
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + H + ++F+ G C+
Sbjct: 695 NCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDHCNFGFKFLRSFNDVG-----CEPCQC 749
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS+N CN G+C+CK G +CD C N Y CK+C+C+ AGS+
Sbjct: 750 NLH-----GSVNKFCNPHSGQCECKKEAKGLQCDTCRENFYGLDVTNCKACDCDTAGSLP 804
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T C++ GQC CK NVEG QC
Sbjct: 805 GTV-CNAKTGQCICKPNVEGRQC 826
Score = 331 (121.6 bits), Expect = 8.8e-28, P = 8.8e-28
Identities = 80/234 (34%), Positives = 125/234 (53%)
Query: 24 GHCLDCQGDRDGPNCEKCRD-NYYQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + +G C KC + N+Y + ++F C CNC+ G++N L CN S G+C CK
Sbjct: 813 GQCI-CKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCNKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C++C+ + Y+ C+ CEC+ G++ T CD + GQC + +GR
Sbjct: 872 LGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTI-CDPISGQCLCVP-NRQGR 929
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPG-VTGD 193
+ Q P GN L C T G++N CNS G+C C+ + G
Sbjct: 930 RCNQC--QPGFYISP-GNATGCLP-CSCHTT-----GAVNHICNSLTGQCVCQDASIAGQ 980
Query: 194 KCDRCDVNHYDFG-EAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CD+C +++ F + G C+ C C+ +G++ T C V GQC CK V G++C
Sbjct: 981 RCDQCKDHYFGFDPQTGRCQPCNCHLSGALNET--CHLVTGQCFCKQFVTGSKC 1032
Score = 250 (93.1 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 76/268 (28%), Positives = 113/268 (42%)
Query: 2 NCNGFSN--RCFFDKELYNRTGHGGHCLDCQGD---RDGP-----NCEKCRDNYYQKSGD 51
NC+ S RC +E + H CL D R G NC+ C+ N + KS
Sbjct: 526 NCDTTSQPYRCLCSQESFTEGLHCDRCLPLYNDKPFRQGDQVYAFNCKPCQCNSHSKSC- 584
Query: 52 NFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG--------CK 102
++ + + P G C C+ TG C+ C Y F + G CK
Sbjct: 585 HYNISVDPFPFEHFR---GGGGVCDDCEHNTTGRNCELC--KDYFFRQVGADPSAIDVCK 639
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQ-LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
C+C+ G+ + CD + GQC + +S R + + + DP G C
Sbjct: 640 PCDCDTVGTRNGSILCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQELDPDG-----CSPC 694
Query: 162 KRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNP 217
+T G ++ C+ + G+C+CK V G +CD C+ F + GC+ C+CN
Sbjct: 695 NCNTSGTVDG---DITCHQNSGQCKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQCNL 751
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GSV C+ GQCECK +G QC
Sbjct: 752 HGSVNKF--CNPHSGQCECKKEAKGLQC 777
Score = 234 (87.4 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 72/237 (30%), Positives = 103/237 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
CNC+ L N++ G C C+ G C +C + Y + DNF C C
Sbjct: 847 CNCD--KTGTINGSLLCNKST--GQC-PCKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCE 901
Query: 59 CNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHY-DFGEA-GCKSCECNPAGSVKN 114
C+ +G+L C+ G+C C P G +C++C Y G A GC C C+ G+V +
Sbjct: 902 CDSLGTLPGTICDPISGQCLCVPNRQGRRCNQCQPGFYISPGNATGCLPCSCHTTGAVNH 961
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
C+S+ GQC S G+ + + FDP R C+ L G+L
Sbjct: 962 I--CNSLTGQCVCQDASIAGQRCDQCK-DHYFGFDPQTGR------CQPCNCHLS--GAL 1010
Query: 175 NLQCNS-EGRCQCKPGVTGDKCDRC--DVNHYDFGEA-GCKSCECN---PAGSVKNT 224
N C+ G+C CK VTG KCD C +H D GC P G V+++
Sbjct: 1011 NETCHLVTGQCFCKQFVTGSKCDACVPSASHLDVNNLLGCSKTPFQQPPPRGQVQSS 1067
Score = 188 (71.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 67/230 (29%), Positives = 94/230 (40%)
Query: 42 RDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQC-KPGVT-GDKCDRCDVNHYD--F 96
R YY C C+ N S+ RC C + T G CDRC + D F
Sbjct: 503 RHRYYAVDEITISGRCQCHGHAD-NCDTTSQPYRCLCSQESFTEGLHCDRCLPLYNDKPF 561
Query: 97 GEA------GCKSCECNPAG-------SVKNTP--NCDSVKGQCESAQLSSRGRVHTELR 141
+ CK C+CN SV P + G C+ + ++ GR + EL
Sbjct: 562 RQGDQVYAFNCKPCQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGR-NCELC 620
Query: 142 VQ---SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC 198
+ DP+ + + C DT +G L Q G+C CK V+G +C++C
Sbjct: 621 KDYFFRQVGADPSAIDV--CKPCDCDTVGTRNGSILCDQIG--GQCNCKRHVSGRQCNQC 676
Query: 199 DVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y+ E GC C CN +G+V C GQC+CK NV G +C
Sbjct: 677 QNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQNSGQCKCKANVIGLRC 726
>MGI|MGI:1341292 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10090 "Mus musculus" [GO:0001917 "photoreceptor inner
segment" evidence=ISO] [GO:0002141 "stereocilia ankle link"
evidence=NAS] [GO:0002142 "stereocilia ankle link complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005518 "collagen binding" evidence=ISO;IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0017022 "myosin binding" evidence=IPI]
[GO:0032391 "photoreceptor connecting cilium" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=IDA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045494 "photoreceptor cell maintenance"
evidence=ISO;IMP] [GO:0048496 "maintenance of organ identity"
evidence=ISO] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0050953 "sensory perception of light stimulus" evidence=ISO]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IMP]
[GO:0060171 "stereocilium membrane" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1341292 GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113 Pfam:PF02210
GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0002142 GO:GO:0048496 GO:GO:0060171
GeneTree:ENSGT00700000104042 CTD:7399 eggNOG:NOG245744
HOGENOM:HOG000124780 HOVERGEN:HBG094138 OMA:EIRIQAC
OrthoDB:EOG4B5P57 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AF151717 EMBL:DQ073638 EMBL:AC121799 EMBL:AC121892
EMBL:AC122122 EMBL:AC129312 EMBL:AC135863 EMBL:AC165230
IPI:IPI00720231 IPI:IPI00742431 IPI:IPI01007786 RefSeq:NP_067383.3
UniGene:Mm.331238 ProteinModelPortal:Q2QI47 STRING:Q2QI47
PhosphoSite:Q2QI47 PRIDE:Q2QI47 Ensembl:ENSMUST00000060479
GeneID:22283 KEGG:mmu:22283 UCSC:uc007eae.1 UCSC:uc007eaf.1
ChiTaRS:USH2A NextBio:302411 Bgee:Q2QI47 Genevestigator:Q2QI47
GermOnline:ENSMUSG00000026609 Uniprot:Q2QI47
Length = 5193
Score = 385 (140.6 bits), Expect = 1.6e-33, P = 1.6e-33
Identities = 96/263 (36%), Positives = 132/263 (50%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-D-- 51
C C+G ++ C +D + +NR G GG C DCQ G +CE C+D +Y+ G D
Sbjct: 572 CQCHGHASSCHYDASVDPFPLEHNRGG-GGVCDDCQHHTTGRHCESCQDYFYRPVGADPA 630
Query: 52 --NFCTACNCNPIGSLN--LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
+ C C+CN G+ N L C+ G+C CK V+G +C +C YD GC+
Sbjct: 631 APDACKLCDCNRAGTRNGSLHCDPIGGQCDCKRRVSGRQCLQCQDGFYDLQALDPDGCRP 690
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C CNP+G+V C GQC S + + G LR +R NF + ++ C+
Sbjct: 691 CNCNPSGTVDGDITCHQNSGQC-SCKANVIG-----LRC-NRCNFGFKFLQSFNGDGCEP 743
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
L HG S+N C+ G+C CK G KCD C N Y + C+ C+C+ AGS
Sbjct: 744 CQCNL-HG-SVNQLCDPLSGQCACKKEAKGLKCDSCRENFYGLPWSACEVCDCSKAGSQP 801
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK NV G QC
Sbjct: 802 GTV-CDTETGQCVCKPNVGGRQC 823
Score = 319 (117.4 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 74/234 (31%), Positives = 121/234 (51%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C+ Y+ ++ + C CNC +G++N L+C+ S G+C CK
Sbjct: 810 GQCV-CKPNVGGRQCSQCKAGYFNLYQNDSHLCLTCNCEKMGTVNGSLRCDKSTGQCPCK 868
Query: 79 PGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C +C + ++ GC++C+C+ G++ + CD + GQC +GR
Sbjct: 869 LGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGSM-CDPISGQCLCLP-HRQGR 926
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK-PGVTGD 193
E Q + F + + C T G+++ CNS G+C C P TG
Sbjct: 927 -RCE---QCQPGFYSSPSNATGCLPCLCHT-----AGAVSHICNSVTGQCSCHDPSTTGR 977
Query: 194 KCDRCDVNHYDFGE-AG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +C +++ F G C+ C C+ AG+ T CD+V GQC CK+ V G++C
Sbjct: 978 SCHQCQESYFRFDPLTGRCRPCHCHVAGASNGT--CDAVTGQCFCKEFVTGSKC 1029
Score = 241 (89.9 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 80/255 (31%), Positives = 113/255 (44%)
Query: 1 CNC------NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-- 52
CNC NG S RC DK G C C+ G C +C+ + + + DN
Sbjct: 844 CNCEKMGTVNG-SLRC--DKST-------GQC-PCKLGVTGLRCHQCKPHRFNLTMDNPQ 892
Query: 53 FCTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNP 108
C AC+C+ +G+L C+ G+C C P G +C++C Y GC C C+
Sbjct: 893 GCQACDCDSLGTLPGSMCDPISGQCLCLPHRQGRRCEQCQPGFYSSPSNATGCLPCLCHT 952
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
AG+V + C+SV GQC S+ GR + + +S FDP R R C
Sbjct: 953 AGAVSHI--CNSVTGQCSCHDPSTTGRSCHQCQ-ESYFRFDPLTGRC---RPCHCHV--- 1003
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC--DVNHYDFGEA-GCK---SCECNPAGSV 221
G+ N C++ G+C CK VTG KCD C +H D GC S + P G V
Sbjct: 1004 --AGASNGTCDAVTGQCFCKEFVTGSKCDTCVPGASHLDVNNLLGCSKTPSQQPPPRGWV 1061
Query: 222 KNTPNCDSVKGQCEC 236
+++ + EC
Sbjct: 1062 QSSSTINVSWSPPEC 1076
Score = 233 (87.1 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 79/274 (28%), Positives = 114/274 (41%)
Query: 1 CNCNGFSNRCFFDKELYNR--TGH----GGHCLDCQ---GD---RDGPNCEKCRDNYYQK 48
C C+G + C + Y + H G C C D R G N Q
Sbjct: 515 CQCHGHAETCDRTRRPYRCLCSPHSFTEGPQCDRCSPLYNDKPFRSGDNVNAFNCKPCQC 574
Query: 49 SGDNFCTACNCNP-IGSLNLQCNSEGR--CQ-CKPGVTGDKCDRC-DVNHYDFGEA---- 99
G ++C+ + + L+ N G C C+ TG C+ C D + G
Sbjct: 575 HGH--ASSCHYDASVDPFPLEHNRGGGGVCDDCQHHTTGRHCESCQDYFYRPVGADPAAP 632
Query: 100 -GCKSCECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
CK C+CN AG+ + +CD + GQC+ ++S R + + + DP G
Sbjct: 633 DACKLCDCNRAGTRNGSLHCDPIGGQCDCKRRVSGRQCLQCQDGFYDLQALDPDG----- 687
Query: 158 LRRCKRDTYPLGH-GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH---YDFGEAGCKSC 213
R C + P G G + NS G+C CK V G +C+RC+ F GC+ C
Sbjct: 688 CRPCNCN--PSGTVDGDITCHQNS-GQCSCKANVIGLRCNRCNFGFKFLQSFNGDGCEPC 744
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+CN GSV CD + GQC CK +G +C S
Sbjct: 745 QCNLHGSVNQL--CDPLSGQCACKKEAKGLKCDS 776
Score = 180 (68.4 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 71/239 (29%), Positives = 94/239 (39%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG-SLNLQCNSEGRCQCKPGVT 82
G C C G + C++ R Y C C+P + QC+ +C P +
Sbjct: 513 GRC-QCHGHAE--TCDRTRRPY----------RCLCSPHSFTEGPQCD-----RCSP-LY 553
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNP-AGSVKNTPNCDSVK--------GQCESAQLSSR 133
DK R N F CK C+C+ A S + D G C+ Q +
Sbjct: 554 NDKPFRSGDNVNAFN---CKPCQCHGHASSCHYDASVDPFPLEHNRGGGGVCDDCQHHTT 610
Query: 134 GRVHTEL---RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPG 189
GR H E DPA L C R GSL+ C+ G+C CK
Sbjct: 611 GR-HCESCQDYFYRPVGADPAAPDACKLCDCNRAGT---RNGSLH--CDPIGGQCDCKRR 664
Query: 190 VTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V+G +C +C YD GC+ C CNP+G+V C GQC CK NV G +C
Sbjct: 665 VSGRQCLQCQDGFYDLQALDPDGCRPCNCNPSGTVDGDITCHQNSGQCSCKANVIGLRC 723
>UNIPROTKB|F1NZ77 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002142 "stereocilia ankle link complex" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0016324
"apical plasma membrane" evidence=IEA] [GO:0017022 "myosin binding"
evidence=IEA] [GO:0035315 "hair cell differentiation" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0060171 "stereocilium membrane" evidence=IEA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016324
SUPFAM:SSF49265 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
Pfam:PF02210 GO:GO:0032421 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0002142
GeneTree:ENSGT00700000104042 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AADN02012097 EMBL:AADN02012098
EMBL:AADN02012099 EMBL:AADN02012100 EMBL:AADN02012101
EMBL:AADN02012102 EMBL:AADN02012103 IPI:IPI00599063
Ensembl:ENSGALT00000015728 ArrayExpress:F1NZ77 Uniprot:F1NZ77
Length = 5217
Score = 385 (140.6 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 95/263 (36%), Positives = 129/263 (49%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF- 53
C C + C +D E+ Y R G GG C +CQ + G NCE C+D +Y+++G +
Sbjct: 574 CQCYSHAVSCHYDLEMDPFPQEYYR-GSGGVCDNCQHNTTGRNCELCKDFHYRQAGADLS 632
Query: 54 ----CTACNCNPIGSLN--LQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKS 103
C C+C G+ N L C N G+C CK V+G +C++C Y+ ++ GC
Sbjct: 633 AIDVCKPCDCYATGTKNKSLLCDNIGGQCNCKRHVSGRQCNQCQEGFYNLQQSNPDGCSP 692
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C CN +G+V C GQC+ + + G R S NF R + C+
Sbjct: 693 CNCNTSGTVNGDITCHQNSGQCK-CKANVIGP-----RCDSC-NFGFKALRYSNEDGCE- 744
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ HG S+N CN G+C CK V G CD C N Y GCK+CECN AGS
Sbjct: 745 PCWCNSHG-SVNQFCNPLTGQCNCKEQVKGLLCDTCVDNFYGLDVTGCKACECNIAGSFA 803
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK N+ G QC
Sbjct: 804 GTV-CDARTGQCACKPNIGGRQC 825
Score = 319 (117.4 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 79/234 (33%), Positives = 119/234 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ-KSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C C+ + G C +C D Y++ + +F C C+C+ G++N L C+ S G+C CK
Sbjct: 812 GQCA-CKPNIGGRQCNECLDGYHRIQVNHSFVCLPCDCDKAGTVNGSLLCDKSTGQCPCK 870
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GV G +C++C ++ Y+ GC+ C+C+ G++ T CD V GQC +GR
Sbjct: 871 AGVIGLQCNQCMLHTYNLSMRNLLGCQRCDCDAKGTLAGTV-CDHVSGQCVCLP-HRQGR 928
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKP-GVTGD 193
E + F P+ + C T GS+N C+ G+C C+ VTG
Sbjct: 929 RCNECKPGFY--FSPSS--VTGCLPCLCHT-----AGSVNQVCDKLTGQCICQDVSVTGR 979
Query: 194 KCDRCDVNHYDFGEA-G-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+RC +H+ F G C+ C C+PAG++ T C V GQC CK V G +C
Sbjct: 980 TCERCKEHHFGFDSVTGRCQHCNCHPAGAISGT--CHLVTGQCVCKQFVTGLKC 1031
Score = 208 (78.3 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 65/215 (30%), Positives = 93/215 (43%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKP 79
G C C+ G C +C + Y S N C C+C+ G+L C+ G+C C P
Sbjct: 865 GQC-PCKAGVIGLQCNQCMLHTYNLSMRNLLGCQRCDCDAKGTLAGTVCDHVSGQCVCLP 923
Query: 80 GVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
G +C+ C Y F + GC C C+ AGSV CD + GQC +S GR
Sbjct: 924 HRQGRRCNECKPGFY-FSPSSVTGCLPCLCHTAGSVNQV--CDKLTGQCICQDVSVTGRT 980
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
+ + FD R + C + +P G+++ C+ G+C CK VTG KC
Sbjct: 981 CERCK-EHHFGFDSVTGRC---QHC--NCHP---AGAISGTCHLVTGQCVCKQFVTGLKC 1031
Query: 196 DRC--DVNHYDFGEA-GCKSCECN---PAGSVKNT 224
D C + ++ D GC P G V N+
Sbjct: 1032 DNCVPNASNLDVHNLFGCSKTPFQQPPPTGEVLNS 1066
Score = 182 (69.1 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 69/245 (28%), Positives = 103/245 (42%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC-NPIGSLNLQCNSEGRCQ 76
N G C +C G D NC+ + Y C C + +QC+ +
Sbjct: 509 NEVTVSGRC-NCHGHAD--NCDTAMEPY----------RCLCIKESYTEGIQCD-----R 550
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCEC-NPAGSVKNTPNCDSVK--------GQCES 127
C P + DK R + + CK C+C + A S D G C++
Sbjct: 551 CLP-LYNDKPFRPGDQVHAYN---CKPCQCYSHAVSCHYDLEMDPFPQEYYRGSGGVCDN 606
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQC-NSEGRCQ 185
Q ++ GR + EL ++ AG + + CK D Y G +L C N G+C
Sbjct: 607 CQHNTTGR-NCELCKDF--HYRQAGADLSAIDVCKPCDCYATGTKNK-SLLCDNIGGQCN 662
Query: 186 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
CK V+G +C++C Y+ ++ GC C CN +G+V C GQC+CK NV G
Sbjct: 663 CKRHVSGRQCNQCQEGFYNLQQSNPDGCSPCNCNTSGTVNGDITCHQNSGQCKCKANVIG 722
Query: 243 AQCRS 247
+C S
Sbjct: 723 PRCDS 727
Score = 154 (59.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 66/275 (24%), Positives = 108/275 (39%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDC--QGDRDGPNCEKCRDNYYQKS---GDNF-- 53
CNC+G ++ C E Y CL C + +G C++C Y K GD
Sbjct: 517 CNCHGHADNCDTAMEPYR-------CL-CIKESYTEGIQCDRCLPLYNDKPFRPGDQVHA 568
Query: 54 --CTACNC--NPIGS-LNLQCN---------SEGRCQ-CKPGVTGDKCDRCDVNHYDFGE 98
C C C + + +L+ + S G C C+ TG C+ C HY
Sbjct: 569 YNCKPCQCYSHAVSCHYDLEMDPFPQEYYRGSGGVCDNCQHNTTGRNCELCKDFHYRQAG 628
Query: 99 AGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
A + + C P S+ C++ G+ + + V R+ + ++
Sbjct: 629 ADLSAIDVCKPCDCYATGTKNKSLL--CDNIG----GQCNCKRHVSGRQ-CNQCQEGFYN 681
Query: 158 LRRCKRD-TYPLG--HGGSLN--LQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
L++ D P G++N + C+ + G+C+CK V G +CD C+ +
Sbjct: 682 LQQSNPDGCSPCNCNTSGTVNGDITCHQNSGQCKCKANVIGPRCDSCNFGFKALRYSNED 741
Query: 212 SCE-CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CE C C+ + GQC CK+ V+G C
Sbjct: 742 GCEPCWCNSHGSVNQFCNPLTGQCNCKEQVKGLLC 776
>UNIPROTKB|Q9H1U4 [details] [associations]
symbol:MEGF9 "Multiple epidermal growth factor-like domains
protein 9" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001368
SMART:SM00208 GO:GO:0016021 EMBL:CH471090 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 EMBL:AL138836 EMBL:AK295380 EMBL:AY358370
EMBL:AB011542 IPI:IPI00401283 RefSeq:NP_001073966.2
UniGene:Hs.741238 ProteinModelPortal:Q9H1U4 SMR:Q9H1U4
STRING:Q9H1U4 PhosphoSite:Q9H1U4 DMDM:116242627 PaxDb:Q9H1U4
PRIDE:Q9H1U4 DNASU:1955 Ensembl:ENST00000373930 GeneID:1955
KEGG:hsa:1955 UCSC:uc022bms.1 CTD:1955 GeneCards:GC09M123363
HGNC:HGNC:3234 HPA:HPA014319 MIM:604268 neXtProt:NX_Q9H1U4
eggNOG:NOG302694 HOGENOM:HOG000234343 HOVERGEN:HBG080442
InParanoid:Q9H1U4 OrthoDB:EOG43R3MN PhylomeDB:Q9H1U4
GenomeRNAi:1955 NextBio:7923 ArrayExpress:Q9H1U4 Bgee:Q9H1U4
CleanEx:HS_MEGF9 Genevestigator:Q9H1U4 GermOnline:ENSG00000106780
Uniprot:Q9H1U4
Length = 602
Score = 369 (135.0 bits), Expect = 1.8e-33, P = 1.8e-33
Identities = 81/255 (31%), Positives = 128/255 (50%)
Query: 1 CNCNGFS----NRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTA 56
CNC+ NRC N+T G C +C+ G +CE C++ +Y C
Sbjct: 204 CNCSVVGSLNVNRC-------NQTT--GQC-ECRPGYQGLHCETCKEGFYLNYTSGLCQP 253
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
C+C+P G+L++ CNS G+CQCK GV G CDRC +Y F + GC C+CN +
Sbjct: 254 CDCSPHGALSIPCNSSGKCQCKVGVIGSICDRCQDGYYGFSKNGCLPCQCN-----NRSA 308
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
+CD++ G C + Q +S+G H E + ++ F + + + RC + GS ++
Sbjct: 309 SCDALTGACLNCQENSKGN-HCE---ECKEGFYQSPDATKECLRCPCSA--VTSTGSCSI 362
Query: 177 QCNS-EGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQ 233
+ + E C QCK G G C++C+ +Y+F ++ C+ C+C+ TP C G+
Sbjct: 363 KSSELEPECDQCKDGYIGPNCNKCENGYYNF-DSICRKCQCHGHVDPVKTPKICKPESGE 421
Query: 234 C-ECKDNVEGAQCRS 247
C C N G C +
Sbjct: 422 CINCLHNTTGFWCEN 436
>ZFIN|ZDB-GENE-060503-794 [details] [associations]
symbol:ush2a "Usher syndrome 2A (autosomal
recessive, mild)" species:7955 "Danio rerio" [GO:0042462 "eye
photoreceptor cell development" evidence=IGI] InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-060503-794
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0042462 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AL845481 EMBL:CT027582 EMBL:AL928842
EMBL:AL929128 IPI:IPI00882773 UniGene:Dr.118940 UniGene:Dr.158626
Ensembl:ENSDART00000086201 InParanoid:Q1MTD2 Uniprot:Q1MTD2
Length = 5236
Score = 379 (138.5 bits), Expect = 7.2e-33, P = 7.2e-33
Identities = 89/264 (33%), Positives = 130/264 (49%)
Query: 1 CNCNGFSNRCFFDKELYNRTG-H----GGHCLDCQGDRDGPNCEKCRDNYYQKSG----- 50
C C G ++ C ++ L G H GG C DC + G NCE+CR +Y++ G
Sbjct: 587 CQCYGHASSCHYNSSLDPHPGEHFRGGGGVCDDCTHNTTGRNCERCRSLFYREVGALLWA 646
Query: 51 DNFCTACNCNPIGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSC 104
+ C AC C+ G++N + E G+C+CK V+G +C++C Y A GC++C
Sbjct: 647 TDVCKACECHSAGTINASLHCEPIGGQCKCKRHVSGRQCNQCQHGFYKLQSALADGCRAC 706
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN AG+V+ C GQC+ A + + + +P G C
Sbjct: 707 NCNTAGTVQPDITCHQDSGQCQCKANVIGLTCDRCNYGFKFLNHTNPDG-----CISCGC 761
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSV 221
D + GSL+ CN G+C+CK GV G CD C + Y +G C C C+ GSV
Sbjct: 762 DPW-----GSLHQFCNPFTGQCECKAGVRGLLCDTCIPHFYSQNSSGVCLPCNCSLNGSV 816
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
T +CD+V GQC+CK + EG +C
Sbjct: 817 PGT-SCDAVTGQCKCKPHTEGRRC 839
Score = 241 (89.9 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 64/233 (27%), Positives = 102/233 (43%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-NLQCNS-EGRCQCKPGV 81
G C +C+ G C+ C ++Y ++ C CNC+ GS+ C++ G+C+CKP
Sbjct: 776 GQC-ECKAGVRGLLCDTCIPHFYSQNSSGVCLPCNCSLNGSVPGTSCDAVTGQCKCKPHT 834
Query: 82 TGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G +CD C ++ + GC C+C+ G+V + CD GQC R +
Sbjct: 835 EGRRCDVCRDGYHSLDRSNSLGCLPCQCDLRGTVNGSGVCDKTTGQCLCKNNVESLRCN- 893
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ-CNS-EGRCQCKPGVTGDKCD 196
R + + N + C D H G++ C+ G+C C P G C
Sbjct: 894 --RCSAHTYNLSSANATHGCQPCYCD-----HIGTVPATVCDPVSGQCICLPTRYGRDCG 946
Query: 197 RCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKD-NVEGAQC 245
C + EAG C+ CEC+ G++ C + GQC C ++ G +C
Sbjct: 947 TCKPGFF-LSEAGLSECEVCECHSVGAMGQV--CAAHSGQCVCAHPSLTGHRC 996
Score = 203 (76.5 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 61/185 (32%), Positives = 84/185 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQ-CNS-EGRCQCK 78
G CL C+ + + C +C + Y S N C C C+ IG++ C+ G+C C
Sbjct: 879 GQCL-CKNNVESLRCNRCSAHTYNLSSANATHGCQPCYCDHIGTVPATVCDPVSGQCICL 937
Query: 79 PGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
P G C C + EAG C+ CEC+ G++ C + GQC A S G
Sbjct: 938 PTRYGRDCGTCKPGFF-LSEAGLSECEVCECHSVGAMGQV--CAAHSGQCVCAHPSLTG- 993
Query: 136 VHTELRVQSRK-NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGD 193
H + Q F+P+ R C D P+G N C+ + G+C CKP VTGD
Sbjct: 994 -HRCDQCQDLFFGFNPSVGRC---EPCGCD--PVG---GFNGTCHPQTGQCLCKPFVTGD 1044
Query: 194 KCDRC 198
KCD C
Sbjct: 1045 KCDAC 1049
Score = 175 (66.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 48/160 (30%), Positives = 73/160 (45%)
Query: 101 CKSCEC-NPAGSVKNTPNCDSVKGQ--------CESAQLSSRGRVHTELRVQSRKNFDPA 151
C+ C+C A S + D G+ C+ ++ GR + E R +S +
Sbjct: 584 CRPCQCYGHASSCHYNSSLDPHPGEHFRGGGGVCDDCTHNTTGR-NCE-RCRSLF-YREV 640
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEA 208
G +W CK G++N + E G+C+CK V+G +C++C Y A
Sbjct: 641 GALLWATDVCK--ACECHSAGTINASLHCEPIGGQCKCKRHVSGRQCNQCQHGFYKLQSA 698
Query: 209 ---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC++C CN AG+V+ C GQC+CK NV G C
Sbjct: 699 LADGCRACNCNTAGTVQPDITCHQDSGQCQCKANVIGLTC 738
Score = 159 (61.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSE-GRCQCKP 79
H G C+ G C++C+D ++ + C C C+P+G N C+ + G+C CKP
Sbjct: 980 HSGQCVCAHPSLTGHRCDQCQDLFFGFNPSVGRCEPCGCDPVGGFNGTCHPQTGQCLCKP 1039
Query: 80 GVTGDKCDRC 89
VTGDKCD C
Sbjct: 1040 FVTGDKCDAC 1049
Score = 131 (51.2 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 28/78 (35%), Positives = 40/78 (51%)
Query: 172 GSLNLQCNSE-GRCQCK-PGVTGDKCDRCDVNHYDFGEA-G-CKSCECNPAGSVKNTPNC 227
G++ C + G+C C P +TG +CD+C + F + G C+ C C+P G T C
Sbjct: 971 GAMGQVCAAHSGQCVCAHPSLTGHRCDQCQDLFFGFNPSVGRCEPCGCDPVGGFNGT--C 1028
Query: 228 DSVKGQCECKDNVEGAQC 245
GQC CK V G +C
Sbjct: 1029 HPQTGQCLCKPFVTGDKC 1046
Score = 53 (23.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 26/97 (26%), Positives = 35/97 (36%)
Query: 42 RDNYYQKSGDNFCTACNCNPIGSLNLQCN---SEGRCQCKPG--VTGDKCDRCD--VNHY 94
R YY C C+ G + C+ S RC C P G C+RC N
Sbjct: 515 RHRYYAVDEITISGRCECH--GHAD-SCDTSVSPYRCACLPESHTHGANCERCIPLFNDK 571
Query: 95 DF--GEA----GCKSCEC-NPAGSVKNTPNCDSVKGQ 124
F G+ C+ C+C A S + D G+
Sbjct: 572 PFRPGDQIQAFNCRPCQCYGHASSCHYNSSLDPHPGE 608
>UNIPROTKB|F1NLU4 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IEA] GO:GO:0050873
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED EMBL:AADN02044975 IPI:IPI00592759
Ensembl:ENSGALT00000002051 Uniprot:F1NLU4
Length = 1165
Score = 370 (135.3 bits), Expect = 9.1e-33, P = 9.1e-33
Identities = 86/263 (32%), Positives = 121/263 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCNG S C FD E+++ +G GG C DCQ + +G NCE+C+ NY++ +
Sbjct: 314 CNCNGHSASCHFDPEVFHSSGGVSGGVCDDCQHNTEGNNCERCKTNYFRNQRQDLTHPEA 373
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ G C CK V G++C C A GC+ C CN
Sbjct: 374 CQPCECDPDGTVPGSVCDPLSGHCVCKENVQGERCHLCKPGFAQLAHANPLGCRRCACNV 433
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G+ +N P CD G C V T+ + ++D A R R C+ + P
Sbjct: 434 LGTRQNVP-CDDETGSCSCLP----NVVGTDCDQCAAGHWDMASGR--GCRPCECN--P- 483
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCDR-----CDVNHYDFGEAGCKSCECNPAGSVK 222
GS ++ CN G+CQC+ G TG C C H+ GC C C+ G+
Sbjct: 484 --SGSHSIHCNQFTGQCQCREGFTGRTCSAAQQQVCPDRHFGDVRVGCTECNCDFQGT-- 539
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
CD G C C+ V G +C
Sbjct: 540 EDVGCDKSTGHCLCRPGVTGPRC 562
Score = 289 (106.8 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 67/202 (33%), Positives = 103/202 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSL-NLQCNSE-GRCQCKP 79
GHC+ C+ + G C C+ + Q + N C C CN +G+ N+ C+ E G C C P
Sbjct: 395 GHCV-CKENVQGERCHLCKPGFAQLAHANPLGCRRCACNVLGTRQNVPCDDETGSCSCLP 453
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQ-LSSRGRVH 137
V G CD+C H+D GC+ CECNP+GS ++ +C+ GQC+ + + R
Sbjct: 454 NVVGTDCDQCAAGHWDMASGRGCRPCECNPSGS--HSIHCNQFTGQCQCREGFTGRTCSA 511
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCD 196
+ +V ++F R+ C D G+ ++ C+ S G C C+PGVTG +CD
Sbjct: 512 AQQQVCPDRHFGDV--RV-GCTECNCDFQ-----GTEDVGCDKSTGHCLCRPGVTGPRCD 563
Query: 197 RCDVNHYDFGEAGCKSCE-CNP 217
+C +H + SCE C+P
Sbjct: 564 QCQRDHC----STYPSCEPCHP 581
Score = 251 (93.4 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 78/275 (28%), Positives = 110/275 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHG-----GHCLDCQGDRDGPNCEKC----RDNYYQKSGD 51
C CNG ++RC ++ + G C +CQ + GPNC C D + + D
Sbjct: 247 CFCNGHADRCIPSRDPHAMDNCSLPQVHGRC-ECQHNTAGPNCGHCAALYNDRPWAPAED 305
Query: 52 NF---CTACNCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 107
N C CNCN G + C+ + GV+G CD C H G C+ C+ N
Sbjct: 306 NDPHECQLCNCN--GH-SASCHFDPEVFHSSGGVSGGVCDDCQ--HNTEGN-NCERCKTN 359
Query: 108 PAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ + CE + G V L + G R CK
Sbjct: 360 YFRNQRQDLTHPEACQPCECDPDGTVPGSVCDPLSGHCVCKENVQGERC---HLCKPGFA 416
Query: 167 PLGHGGSL--------------NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GC 210
L H L N+ C+ E G C C P V G CD+C H+D GC
Sbjct: 417 QLAHANPLGCRRCACNVLGTRQNVPCDDETGSCSCLPNVVGTDCDQCAAGHWDMASGRGC 476
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ CECNP+GS ++ +C+ GQC+C++ G C
Sbjct: 477 RPCECNPSGS--HSIHCNQFTGQCQCREGFTGRTC 509
>RGD|628777 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10116 "Rattus norvegicus" [GO:0002142 "stereocilia ankle
link complex" evidence=ISO] [GO:0005518 "collagen binding"
evidence=ISO] [GO:0005578 "proteinaceous extracellular matrix"
evidence=NAS] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA;ISO] [GO:0016324 "apical plasma membrane"
evidence=ISO] [GO:0017022 "myosin binding" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=ISO] [GO:0045494
"photoreceptor cell maintenance" evidence=ISO] [GO:0048496
"maintenance of organ identity" evidence=ISO] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0050953 "sensory perception of light
stimulus" evidence=ISO] [GO:0060113 "inner ear receptor cell
differentiation" evidence=ISO] [GO:0060171 "stereocilium membrane"
evidence=ISO] [GO:0001917 "photoreceptor inner segment"
evidence=IDA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
RGD:628777 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007601
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0050896 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007605 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:7399
eggNOG:NOG245744 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AY077844 IPI:IPI00202312 RefSeq:NP_001231686.1
RefSeq:NP_742045.2 UniGene:Rn.200477 ProteinModelPortal:Q8K3K1
STRING:Q8K3K1 PhosphoSite:Q8K3K1 PRIDE:Q8K3K1 GeneID:289369
KEGG:rno:289369 UCSC:RGD:628777 NextBio:629723
Genevestigator:Q8K3K1 Uniprot:Q8K3K1
Length = 1512
Score = 371 (135.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 93/263 (35%), Positives = 129/263 (49%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN-- 52
C C+G ++ C +D + YNR G GG C DCQ G NCE C+D +Y+ G +
Sbjct: 571 CQCHGHASSCHYDASMDPFPLEYNRGG-GGVCDDCQHHTTGRNCESCQDYFYRPIGADPA 629
Query: 53 ---FCTACNCNPIGSLN--LQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAG---CKS 103
C C+CN G+ N L C+ G +C CK V+G +C RC + Y C+
Sbjct: 630 DPEVCKHCDCNRDGTRNGSLLCDLVGDQCDCKRRVSGRRCFRCHIGFYGLQALDPDCCRP 689
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+CNP+G+V C GQC S + + G LR R +F R + C+
Sbjct: 690 CDCNPSGTVDGDITCHHNSGQC-SCKANVIG-----LRCD-RCSFGFKFLRSLNADGCEP 742
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
L HG S+N C+ G+C CK G +CD C N Y + C+ C+CN AG+
Sbjct: 743 CHCNL-HG-SVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLPWSACEVCDCNRAGTQA 800
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK +V G +C
Sbjct: 801 GTV-CDAETGQCVCKPSVGGRRC 822
Score = 298 (110.0 bits), Expect = 6.5e-25, P = 6.5e-25
Identities = 74/236 (31%), Positives = 106/236 (44%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQC 77
G C DC+ G C +C +Y Q + C C+CNP G+++ + C+ + G+C C
Sbjct: 655 GDQC-DCKRRVSGRRCFRCHIGFYGLQALDPDCCRPCDCNPSGTVDGDITCHHNSGQCSC 713
Query: 78 KPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
K V G +CDRC GC+ C CN GSV CD + GQC + ++G
Sbjct: 714 KANVIGLRCDRCSFGFKFLRSLNADGCEPCHCNLHGSVNQL--CDPLSGQCVCKK-EAKG 770
Query: 135 RVHTELRVQ-SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTG 192
LR R+NF ++ C R G C++E G+C CKP V G
Sbjct: 771 -----LRCDVCRENFYGLPWSACEVCDCNRA------GTQAGTVCDAETGQCVCKPSVGG 819
Query: 193 DKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C C +++ + C C C G+V + CD GQC CK V G +C
Sbjct: 820 RRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCKLGVTGLRC 875
Score = 291 (107.5 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 72/234 (30%), Positives = 112/234 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ G C +C++ Y+ +++ + C CNC G++N L C+ S G+C CK
Sbjct: 809 GQCV-CKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCK 867
Query: 79 PGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG +C +C + ++ GC++C+C+ G++ + CD V GQC R
Sbjct: 868 LGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLLGSM-CDPVSGQCLCLPHRQERR 926
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK-PGVTGD 193
VQ + + + C T + N CNS G C C P TG
Sbjct: 927 C-----VQCQPGCYSSPSNATGCLPCLCHTV-----ATKNCICNSVTGHCYCPDPSTTGL 976
Query: 194 KCDRCDVNHYDFGE-AG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C ++ F G C+ C C+ AG+ T CD+V GQC CK+ V G++C
Sbjct: 977 SWHQCQDRYFRFDPLTGRCRPCHCHVAGASNGT--CDAVTGQCFCKEFVTGSKC 1028
Score = 188 (71.2 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 64/215 (29%), Positives = 92/215 (42%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSL-NLQCNS-EGRCQCKP 79
G C C+ G C +C+ + + + DN C AC+C+ +G+L C+ G+C C P
Sbjct: 862 GQC-PCKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLLGSMCDPVSGQCLCLP 920
Query: 80 GVTGDKCDRCDVNHYDF--GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
+C +C Y GC C C+ + KN C+SV G C S+ G
Sbjct: 921 HRQERRCVQCQPGCYSSPSNATGCLPCLCHTVAT-KNCI-CNSVTGHCYCPDPSTTGLSW 978
Query: 138 TELRVQSRK-NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
+ Q R FDP R R C G+ N C++ G+C CK VTG KC
Sbjct: 979 HQC--QDRYFRFDPLTGRC---RPCHCHV-----AGASNGTCDAVTGQCFCKEFVTGSKC 1028
Query: 196 DRC--DVNHYDFGEA-GCK---SCECNPAGSVKNT 224
D C +H D C S + P G V+++
Sbjct: 1029 DTCVPGASHLDVNNLLACSKTPSQQPPPRGRVQSS 1063
Score = 177 (67.4 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 69/238 (28%), Positives = 94/238 (39%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG-SLNLQCNSEGRCQCKPGVT 82
G C C G + C++ R Y C C+P + QC GRC P +
Sbjct: 512 GRC-QCHGHAE--TCDRTRRPY----------RCLCSPHSFTEGPQC---GRCS--P-LY 552
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNP-AGSVKNTPNCDSVK--------GQCESAQLSSR 133
DK R + F CK C+C+ A S + D G C+ Q +
Sbjct: 553 NDKPFRSGNKVHAFN---CKPCQCHGHASSCHYDASMDPFPLEYNRGGGGVCDDCQHHTT 609
Query: 134 GRVHTELRVQSRKNF--DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG-RCQCKPGV 190
GR + + DPA + C RD GSL C+ G +C CK V
Sbjct: 610 GRNCESCQDYFYRPIGADPADPEVCKHCDCNRDGT---RNGSL--LCDLVGDQCDCKRRV 664
Query: 191 TGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+G +C RC + Y C+ C+CNP+G+V C GQC CK NV G +C
Sbjct: 665 SGRRCFRCHIGFYGLQALDPDCCRPCDCNPSGTVDGDITCHHNSGQCSCKANVIGLRC 722
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 74/277 (26%), Positives = 105/277 (37%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDR--DGPNCEKCRDNYYQK---SGDNF-- 53
C C+G + C +RT CL C +GP C +C Y K SG+
Sbjct: 514 CQCHGHAETC-------DRTRRPYRCL-CSPHSFTEGPQCGRCSPLYNDKPFRSGNKVHA 565
Query: 54 --CTACNCNPIGSLNLQCNSEGRCQCKP----GVTGDKCDRCDVNHYDFGEAGCKSCE-- 105
C C C+ S C+ + P G CD C H+ G C+SC+
Sbjct: 566 FNCKPCQCHGHAS---SCHYDASMDPFPLEYNRGGGGVCDDCQ--HHTTGR-NCESCQDY 619
Query: 106 -CNPAGSVKNTP----NCDSVKGQCESAQLSSR---GRVHTELRVQSRKNFDPA----GN 153
P G+ P +CD + + L + + RV R+ F G
Sbjct: 620 FYRPIGADPADPEVCKHCDCNRDGTRNGSLLCDLVGDQCDCKRRVSGRRCFRCHIGFYGL 679
Query: 154 RIWDLRRCKR-DTYPLGH-GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
+ D C+ D P G G + NS G+C CK V G +CDRC
Sbjct: 680 QALDPDCCRPCDCNPSGTVDGDITCHHNS-GQCSCKANVIGLRCDRCSFGFKFLRSLNAD 738
Query: 212 SCE-CNPAGSVKNTPN--CDSVKGQCECKDNVEGAQC 245
CE C+ ++ + N CD + GQC CK +G +C
Sbjct: 739 GCEPCHC--NLHGSVNQLCDPLSGQCVCKKEAKGLRC 773
>UNIPROTKB|P24043 [details] [associations]
symbol:LAMA2 "Laminin subunit alpha-2" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0030155 GO:GO:0005198
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
Pfam:PF02210 GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
HOGENOM:HOG000293201 HOVERGEN:HBG052298 KO:K05637 GO:GO:0005606
EMBL:Z26653 EMBL:U66796 EMBL:U66733 EMBL:U66734 EMBL:U66735
EMBL:U66736 EMBL:U66737 EMBL:U66738 EMBL:U66739 EMBL:U66740
EMBL:U66741 EMBL:U66742 EMBL:U66743 EMBL:U66745 EMBL:U66746
EMBL:U66747 EMBL:U66748 EMBL:U66749 EMBL:U66750 EMBL:U66751
EMBL:U66752 EMBL:U66753 EMBL:U66754 EMBL:U66755 EMBL:U66756
EMBL:U66757 EMBL:U66758 EMBL:U66759 EMBL:U66760 EMBL:U66761
EMBL:U66762 EMBL:U66763 EMBL:U66764 EMBL:U66765 EMBL:U66766
EMBL:U66768 EMBL:U66769 EMBL:U66770 EMBL:U66771 EMBL:U66772
EMBL:U66773 EMBL:U66774 EMBL:U66775 EMBL:U66776 EMBL:U66777
EMBL:U66778 EMBL:U66779 EMBL:U66780 EMBL:U66781 EMBL:U66782
EMBL:U66783 EMBL:U66784 EMBL:U66785 EMBL:U66786 EMBL:U66787
EMBL:U66788 EMBL:U66789 EMBL:U66790 EMBL:U66791 EMBL:U66792
EMBL:U66793 EMBL:U66794 EMBL:U66795 EMBL:AL583853 EMBL:AL356124
EMBL:AL445439 EMBL:AL513527 EMBL:AL590613 EMBL:AL669984
EMBL:AL589927 EMBL:M59832 IPI:IPI00873889 PIR:PX0082
RefSeq:NP_000417.2 RefSeq:NP_001073291.1 UniGene:Hs.200841
ProteinModelPortal:P24043 SMR:P24043 DIP:DIP-42562N IntAct:P24043
MINT:MINT-2635209 STRING:P24043 PhosphoSite:P24043 DMDM:215274259
PaxDb:P24043 PRIDE:P24043 DNASU:3908 Ensembl:ENST00000421865
GeneID:3908 KEGG:hsa:3908 UCSC:uc003qbn.3 CTD:3908
GeneCards:GC06P129246 HGNC:HGNC:6482 HPA:CAB040310 MIM:156225
MIM:607855 neXtProt:NX_P24043 Orphanet:258 PharmGKB:PA30271
eggNOG:COG0419 OMA:NCNSFGS OrthoDB:EOG4RFKRM PhylomeDB:P24043
GenomeRNAi:3908 NextBio:15339 ArrayExpress:P24043 Bgee:P24043
CleanEx:HS_LAMA2 Genevestigator:P24043 GermOnline:ENSG00000196569
Uniprot:P24043
Length = 3122
Score = 337 (123.7 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 91/254 (35%), Positives = 116/254 (45%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKS-GDNFCTACNCNP 61
N FS C D+ L G C C GP CE+C + Y+ Q S C C CN
Sbjct: 816 NNFSPTCHLDRSL------GLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 869
Query: 62 IGSLNL--QCNS-EGRCQ-CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVK 113
++ C+S G C CKPG TG C+ C + Y FG+A C+ C CN GS
Sbjct: 870 NLDFSIPGSCDSLSGSCLICKPGTTGRYCELC-ADGY-FGDAVDAKNCQPCRCNAGGSFS 927
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-- 171
C S GQCE R V + R K AG + L+ R P
Sbjct: 928 EV--CHSQTGQCEC-----RANVQGQ-RCDKCK----AGT--FGLQSA-RGCVPCNCNSF 972
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+ G+ NCD
Sbjct: 973 GSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHLGN-----NCDPKT 1027
Query: 232 GQCECKDNVEGAQC 245
G+C C N G +C
Sbjct: 1028 GRCICPPNTIGEKC 1041
Score = 281 (104.0 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 75/240 (31%), Positives = 111/240 (46%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC--N-PIGSLNLQCN---SEGR 74
G CL+C+ GP C+KC +Y K C C C N P + + C+ S G
Sbjct: 771 GECLNCKDHTGGPYCDKCLPGFYGEPTKGTSEDCQPCACPLNIPSNNFSPTCHLDRSLGL 830
Query: 75 -CQ-CKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C C G TG +C+RC + FG+ C+ C+CN +CDS+ G C
Sbjct: 831 ICDGCPVGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSGSCLI 888
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
+ + GR + EL F G+ + D + C+ GGS + C+S+ G+C+C
Sbjct: 889 CKPGTTGR-YCELCADGY--F---GDAV-DAKNCQ--PCRCNAGGSFSEVCHSQTGQCEC 939
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ V G +CD+C + A GC C CN GS + +C+ GQC C+ V G +C
Sbjct: 940 RANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGS--KSFDCEE-SGQCWCQPGVTGKKC 996
Score = 275 (101.9 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 70/227 (30%), Positives = 99/227 (43%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G CL C+ G CE C D Y+ + D C C CN GS + C+S+ G+C+C+ V
Sbjct: 884 GSCLICKPGTTGRYCELCADGYFGDAVDAKNCQPCRCNAGGSFSEVCHSQTGQCECRANV 943
Query: 82 TGDKCDRCDVNHYDFGEAGCKSC-ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CD+C FG + C CN + +C+ GQC Q G+ +
Sbjct: 944 QGQRCDKCKAG--TFGLQSARGCVPCNCNSFGSKSFDCEE-SGQCW-CQPGVTGK-KCDR 998
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCD 199
NF G C+ H G+ C+ + GRC C P G+KC +C
Sbjct: 999 CAHGYFNFQEGG-----CTACE-----CSHLGN---NCDPKTGRCICPPNTIGEKCSKCA 1045
Query: 200 VNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N + GCK+C C+ GS+ C+ GQC C GA+C
Sbjct: 1046 PNTWGHSITTGCKACNCSTVGSLDF--QCNVNTGQCNCHPKFSGAKC 1090
Score = 256 (95.2 bits), Expect = 2.8e-32, Sum P(2) = 2.8e-32
Identities = 46/125 (36%), Positives = 67/125 (53%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN + F + +++TG C +C+ + G C+KC+ + C CNCN
Sbjct: 918 CRCNAGGS---FSEVCHSQTGQ---C-ECRANVQGQRCDKCKAGTFGLQSARGCVPCNCN 970
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS + C G+C C+PGVTG KCDRC +++F E GC +CEC+ G+ NCD
Sbjct: 971 SFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHLGN-----NCDP 1025
Query: 121 VKGQC 125
G+C
Sbjct: 1026 KTGRC 1030
Score = 255 (94.8 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 76/240 (31%), Positives = 103/240 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F D E G C CQ G C++C Y+ Q+ G CTAC
Sbjct: 967 CNCNSFGSKSF-DCE------ESGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACE 1015
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + GRC C P G+KC +C N + GCK+C C+ GS+
Sbjct: 1016 CSHLGN---NCDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDF-- 1070
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
C+ GQC S G TE + N+ P N + D D +
Sbjct: 1071 QCNVNTGQCNCHPKFS-GAKCTECS-RGHWNY-PRCN-LCDCFLPGTDATTCD-SETKKC 1125
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKG 232
C+ + G+C CK V G CDRC + GC SC C G+ T C KG
Sbjct: 1126 SCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYC--FGT---TTQCSEAKG 1180
Score = 217 (81.4 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 51/142 (35%), Positives = 69/142 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRT------GH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R G GG C++C + G NCE C D +++ G
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGV 403
Query: 51 -DNF---CTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+PIGSLN C + G C CK G G CDRC Y
Sbjct: 404 SPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRC-ARGYT- 461
Query: 97 GEAGCKSCECNPAGSVKNTPNC 118
G CK+C C+ GS KN C
Sbjct: 462 GYPDCKACNCSGLGS-KNEDPC 482
Score = 206 (77.6 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 73/239 (30%), Positives = 95/239 (39%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNS-EGRC-QCKPGVTG 83
C G +CE C + + +G F C C C G C+ G C CK G
Sbjct: 726 CPPGYTGSSCESCWPRHRRVNGTIFGGICEPCQC--FGHAE-SCDDVTGECLNCKDHTGG 782
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNC--DSVKGQ-CESAQLSSRG 134
CD+C Y G C+ C C P N +P C D G C+ + G
Sbjct: 783 PYCDKCLPGFYGEPTKGTSEDCQPCAC-PLNIPSNNFSPTCHLDRSLGLICDGCPVGYTG 841
Query: 135 -RVHTELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLGHGGSLNLQCNS-EGRCQ-CKPGV 190
R + P G+ + C+ D GS C+S G C CKPG
Sbjct: 842 PRCERCAEGYFGQPSVPGGS----CQPCQCNDNLDFSIPGS----CDSLSGSCLICKPGT 893
Query: 191 TGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
TG C+ C + Y FG+A C+ C CN GS C S GQCEC+ NV+G +C
Sbjct: 894 TGRYCELC-ADGY-FGDAVDAKNCQPCRCNAGGSFSEV--CHSQTGQCECRANVQGQRC 948
Score = 177 (67.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 65/212 (30%), Positives = 88/212 (41%)
Query: 28 DCQGDRDGPNCEKCRDNYY----QKSGDN------FCTACNCNPIGSLNLQCNSEGR-CQ 76
DC G +CE C +Y Q G C C CN SL C+ E CQ
Sbjct: 1381 DCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTCVPCQCNGHSSL---CDPETSICQ 1437
Query: 77 -CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKN-TPNCDSVKG----QCES 127
C+ GD C+RC + +Y + C+ C C S N +P+C + +G +C +
Sbjct: 1438 NCQHHTAGDFCERCALGYYGIVKGLPNDCQQCACPLISSSNNFSPSCVA-EGLDDYRCTA 1496
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQC 186
G+ + E R P GN + C+ D Y GSL + C+ G C C
Sbjct: 1497 CPRGYEGQ-YCE-RCAPGYTGSP-GNPGGSCQECECDPY-----GSLPVPCDPVTGFCTC 1548
Query: 187 KPGVTGDKCDRCDVNHYDFGEAG-CKSC--EC 215
+PG TG KCD C H+ E C C EC
Sbjct: 1549 RPGATGRKCDGC--KHWHAREGWECVFCGDEC 1578
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 53/148 (35%), Positives = 65/148 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACN 58
C CNG S+ C D E C +CQ G CE+C YY K N C C
Sbjct: 1420 CQCNGHSSLC--DPET-------SICQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1470
Query: 59 CNPIGSLNL---QCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDF-GEAG--CKSCECN 107
C I S N C +EG RC C G G C+RC + G G C+ CEC+
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECD 1530
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGR 135
P GS+ P CD V G C + + + GR
Sbjct: 1531 PYGSLP-VP-CDPVTGFC-TCRPGATGR 1555
Score = 160 (61.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 53/190 (27%), Positives = 76/190 (40%)
Query: 75 CQCKPGVTGDKCDRC-----DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
CQC PG TG C+ C VN FG C+ C+C + +CD V G+C + +
Sbjct: 724 CQCPPGYTGSSCESCWPRHRRVNGTIFGGI-CEPCQC-----FGHAESCDDVTGECLNCK 777
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC-------KRDTYPLGH-GGSLNLQCNSE 181
G + + + +P D + C + P H SL L C+
Sbjct: 778 -DHTGGPYCDKCLPGFYG-EPTKGTSEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDG- 834
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCE- 235
C G TG +C+RC + FG+ C+ C+CN +CDS+ G C
Sbjct: 835 ----CPVGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSGSCLI 888
Query: 236 CKDNVEGAQC 245
CK G C
Sbjct: 889 CKPGTTGRYC 898
Score = 149 (57.5 bits), Expect = 2.8e-32, Sum P(2) = 2.8e-32
Identities = 31/82 (37%), Positives = 41/82 (50%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN---- 226
GSL+ QCN + G+C C P +G KC C H+++ C C+C G+ T +
Sbjct: 1066 GSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYPR--CNLCDCFLPGTDATTCDSETK 1123
Query: 227 ---CDSVKGQCECKDNVEGAQC 245
C GQC CK NVEG C
Sbjct: 1124 KCSCSDQTGQCTCKVNVEGIHC 1145
Score = 146 (56.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 42/124 (33%), Positives = 56/124 (45%)
Query: 1 CNCN--GFSNRCFFDKELYNRTGHG-GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTAC 57
C+C+ G N E + R G G C C+ G +C++C Y +G C AC
Sbjct: 414 CHCDPIGSLNEVCVKDEKHARRGLAPGSC-HCKTGFGGVSCDRCARGY---TGYPDCKAC 469
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC-ECNPAGSVKNTP 116
NC+ +GS N + G C CK V G C RC ++ E K C EC +G V N
Sbjct: 470 NCSGLGSKN-EDPCFGPCICKENVEGGDCSRCKSGFFNLQEDNWKGCDECFCSG-VSN-- 525
Query: 117 NCDS 120
C S
Sbjct: 526 RCQS 529
Score = 143 (55.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 52/192 (27%), Positives = 74/192 (38%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDF-GEAG----------CKSCECNPAGSVKNTPNCDSVK 122
+C C G +G C+ C Y + G C C+CN S+ CD
Sbjct: 1379 KCDCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTCVPCQCNGHSSL-----CDPET 1433
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL-GHGGSLNLQCNSE 181
C++ Q + G + N D ++C PL + + C +E
Sbjct: 1434 SICQNCQHHTAGDFCERCALGYYGIVKGLPN---DCQQC---ACPLISSSNNFSPSCVAE 1487
Query: 182 G----RCQ-CKPGVTGDKCDRCDVNHYDF-GEAG--CKSCECNPAGSVKNTPNCDSVKGQ 233
G RC C G G C+RC + G G C+ CEC+P GS+ P CD V G
Sbjct: 1488 GLDDYRCTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLP-VP-CDPVTGF 1545
Query: 234 CECKDNVEGAQC 245
C C+ G +C
Sbjct: 1546 CTCRPGATGRKC 1557
Score = 139 (54.0 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 30/64 (46%), Positives = 33/64 (51%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G CDRC Y G CK+C C+ GS KN C G C CK+NVE
Sbjct: 440 GSCHCKTGFGGVSCDRC-ARGYT-GYPDCKACNCSGLGS-KNEDPCF---GPCICKENVE 493
Query: 242 GAQC 245
G C
Sbjct: 494 GGDC 497
Score = 60 (26.2 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 21/89 (23%), Positives = 33/89 (37%)
Query: 169 GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAG----------CKSCECNP 217
G G ++ + +C C G +G C+ C Y + G C C+CN
Sbjct: 1365 GRGTTMTPPADLIEKCDCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTCVPCQCNG 1424
Query: 218 AGSVKNTPNCDSVKGQCE-CKDNVEGAQC 245
S+ CD C+ C+ + G C
Sbjct: 1425 HSSL-----CDPETSICQNCQHHTAGDFC 1448
Score = 43 (20.2 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTAC 57
GH C D G+ C C+D+ +G +C C
Sbjct: 761 GHAESCDDVTGE-----CLNCKDH----TGGPYCDKC 788
Score = 36 (17.7 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 234 CECKDNVEGAQCRS 247
C+C G+ C S
Sbjct: 724 CQCPPGYTGSSCES 737
>UNIPROTKB|E1BP05 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060171 "stereocilium membrane" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0035315 "hair cell differentiation" evidence=IEA] [GO:0017022
"myosin binding" evidence=IEA] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0002142 "stereocilia ankle link complex"
evidence=IEA] InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0005604 GO:GO:0060113 Pfam:PF02210 GO:GO:0032421
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0002142 GO:GO:0048496 GeneTree:ENSGT00700000104042
InterPro:IPR006558 SMART:SM00560 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:DAAA02042466 EMBL:DAAA02042467
EMBL:DAAA02042468 EMBL:DAAA02042469 EMBL:DAAA02042470
EMBL:DAAA02042471 EMBL:DAAA02042472 EMBL:DAAA02042473
EMBL:DAAA02042474 EMBL:DAAA02042475 EMBL:DAAA02042476
EMBL:DAAA02042477 EMBL:DAAA02042478 EMBL:DAAA02042479
EMBL:DAAA02042480 EMBL:DAAA02042481 EMBL:DAAA02042482
EMBL:DAAA02042483 IPI:IPI00924139 Ensembl:ENSBTAT00000061112
Uniprot:E1BP05
Length = 5204
Score = 372 (136.0 bits), Expect = 4.0e-32, P = 4.0e-32
Identities = 85/263 (32%), Positives = 129/263 (49%)
Query: 1 CNCNGFSNRCFFDKEL-----YNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-D--- 51
C CN S C ++ + + G GG C DC+ + G NCE C+D ++++ G D
Sbjct: 575 CECNSHSRSCHYNISVDPFPFEHYRGGGGVCDDCEHNTAGKNCELCKDYFFRQVGADPSA 634
Query: 52 -NFCTACNCNPIGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSC 104
+ C C+C+ +G+ N C+ G+C CK V+G +C++C Y+ E GC C
Sbjct: 635 IDVCRPCDCDKVGTRNSSFLCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQEWDPDGCSPC 694
Query: 105 ECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
CN +G+V C GQC+ A + H + ++F+ G C+
Sbjct: 695 NCNTSGTVDGDITCHPNSGQCKCKANVIGLRCDHCNFGFKFLQSFNDDG-----CEPCQC 749
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ + GS+N CN G+C+CK G +CD C + Y GCK+C+C+ AGS
Sbjct: 750 NLH-----GSVNRLCNPLSGQCECKKEAKGLQCDTCREHFYGLDATGCKACDCDVAGSRP 804
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T CD+ GQC CK NV G +C
Sbjct: 805 GTV-CDAWTGQCVCKPNVGGRRC 826
Score = 313 (115.2 bits), Expect = 7.2e-26, P = 7.2e-26
Identities = 82/234 (35%), Positives = 119/234 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNY-YQKSGDNF-CTACNCNPIGSLN--LQCN-SEGRCQCK 78
G C+ C+ + G C +C + Y YQ +F C CNC+ G++N L C+ S G+C CK
Sbjct: 813 GQCV-CKPNVGGRRCSECVEGYFYQPQNRSFLCLPCNCDRTGTVNGSLLCDKSTGQCPCK 871
Query: 79 PGVTGDKCDRCDVNHYDF--GE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GVTG C++C+ + Y G GC+ CEC+P G++ T CD + GQC + +GR
Sbjct: 872 LGVTGLHCNQCESHRYHLTVGSFQGCQMCECDPLGTLPGTI-CDPLSGQCPCLP-NRQGR 929
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPG-VTGD 193
+ Q P GN L C T G++N CNS G+C C+ + G
Sbjct: 930 RCNQC--QPGFYISP-GNATGCLP-CSCHTT-----GAVNHICNSLTGQCVCQDASIAGQ 980
Query: 194 KCDRCDVNHYDFGE-AG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD C ++ F G C+ C C+ +G++ T C V GQC CK V G++C
Sbjct: 981 SCDYCKDLYFGFDSLTGRCQPCNCHLSGALNET--CHLVTGQCFCKRFVTGSKC 1032
Score = 303 (111.7 bits), Expect = 8.3e-25, P = 8.3e-25
Identities = 78/260 (30%), Positives = 119/260 (45%)
Query: 1 CNCN--GFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTA 56
C+C+ G N F ++ GG C +C+ G C +C++ +Y Q+ + C+
Sbjct: 641 CDCDKVGTRNSSFLCDQI------GGQC-NCKRHVSGRQCNQCQNGFYNLQEWDPDGCSP 693
Query: 57 CNCNPIGSLN--LQCN-SEGRCQCKPGVTGDKCDRCDVNH---YDFGEAGCKSCECNPAG 110
CNCN G+++ + C+ + G+C+CK V G +CD C+ F + GC+ C+CN G
Sbjct: 694 CNCNTSGTVDGDITCHPNSGQCKCKANVIGLRCDHCNFGFKFLQSFNDDGCEPCQCNLHG 753
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
SV C+ + GQCE + ++G R + D G + C D
Sbjct: 754 SVNRL--CNPLSGQCECKK-EAKGLQCDTCR-EHFYGLDATG-----CKACDCDVA---- 800
Query: 171 GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTP 225
G C++ G+C CKP V G +C C V Y + C C C+ G+V +
Sbjct: 801 GSRPGTVCDAWTGQCVCKPNVGGRRCSEC-VEGYFYQPQNRSFLCLPCNCDRTGTVNGSL 859
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CD GQC CK V G C
Sbjct: 860 LCDKSTGQCPCKLGVTGLHC 879
Score = 224 (83.9 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 66/214 (30%), Positives = 97/214 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL-NLQCNS-EGRCQCKP 79
G C C+ G +C +C + Y + +F C C C+P+G+L C+ G+C C P
Sbjct: 866 GQC-PCKLGVTGLHCNQCESHRYHLTVGSFQGCQMCECDPLGTLPGTICDPLSGQCPCLP 924
Query: 80 GVTGDKCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
G +C++C Y G A GC C C+ G+V + C+S+ GQC S G+
Sbjct: 925 NRQGRRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHI--CNSLTGQCVCQDASIAGQ-S 981
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCD 196
+ FD R C+ L G+LN C+ G+C CK VTG KCD
Sbjct: 982 CDYCKDLYFGFDSLTGR------CQPCNCHLS--GALNETCHLVTGQCFCKRFVTGSKCD 1033
Query: 197 RC--DVNHYDFGEA-GCK---SCECNPAGSVKNT 224
C + +H D GC S + P G V+++
Sbjct: 1034 TCVPNASHLDISNPLGCSKTPSQQPPPRGQVQSS 1067
Score = 182 (69.1 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 68/232 (29%), Positives = 96/232 (41%)
Query: 42 RDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG---RCQC-KPGVT-GDKCDRCD--VNHY 94
R YY + C C G N C++ RC C + T G CDRC N+
Sbjct: 503 RHRYYGVNEITITGRCQC--YGHAN-HCDTTSQPYRCLCSQESFTEGLHCDRCLPLYNNK 559
Query: 95 DFGEA------GCKSCECNPAG-------SVKNTP--NCDSVKGQCESAQLSSRGRVHTE 139
F ++ CK CECN SV P + G C+ + ++ G+ + E
Sbjct: 560 PFRQSDHVHAFNCKPCECNSHSRSCHYNISVDPFPFEHYRGGGGVCDDCEHNTAGK-NCE 618
Query: 140 LRVQ---SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
L + DP+ + R C D +G S L G+C CK V+G +C+
Sbjct: 619 LCKDYFFRQVGADPSAIDV--CRPCDCDK--VGTRNSSFLCDQIGGQCNCKRHVSGRQCN 674
Query: 197 RCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C Y+ E GC C CN +G+V C GQC+CK NV G +C
Sbjct: 675 QCQNGFYNLQEWDPDGCSPCNCNTSGTVDGDITCHPNSGQCKCKANVIGLRC 726
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 70/279 (25%), Positives = 112/279 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGD-RDGPNCEKCRDNYYQKS--GDNFCTAC 57
C C G +N C + Y CL Q +G +C++C Y K + A
Sbjct: 518 CQCYGHANHCDTTSQPYR-------CLCSQESFTEGLHCDRCLPLYNNKPFRQSDHVHAF 570
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS------ 111
NC P +CNS R C ++ D HY G C CE N AG
Sbjct: 571 NCKPC-----ECNSHSR-SCHYNIS---VDPFPFEHYRGGGGVCDDCEHNTAGKNCELCK 621
Query: 112 ------VKNTPNCDSVKGQCESAQLSSR----------GRVHTELRVQSRKNFDPAGNRI 155
V P+ V C+ ++ +R G+ + + V R+ + N
Sbjct: 622 DYFFRQVGADPSAIDVCRPCDCDKVGTRNSSFLCDQIGGQCNCKRHVSGRQ-CNQCQNGF 680
Query: 156 WDLRRCKRD-TYPLG--HGGSLN--LQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAG 209
++L+ D P G+++ + C+ + G+C+CK V G +CD C+ + F ++
Sbjct: 681 YNLQEWDPDGCSPCNCNTSGTVDGDITCHPNSGQCKCKANVIGLRCDHCNFG-FKFLQS- 738
Query: 210 CKSCECNPAG-SVKNTPN--CDSVKGQCECKDNVEGAQC 245
C P ++ + N C+ + GQCECK +G QC
Sbjct: 739 FNDDGCEPCQCNLHGSVNRLCNPLSGQCECKKEAKGLQC 777
>FB|FBgn0002526 [details] [associations]
symbol:LanA "Laminin A" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007422 "peripheral nervous system development" evidence=NAS]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0035001 "dorsal trunk
growth, open tracheal system" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016321
"female meiosis chromosome segregation" evidence=IMP] [GO:0007498
"mesoderm development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0001964 "startle
response" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IMP] [GO:0048854 "brain
morphogenesis" evidence=IMP] [GO:0002121 "inter-male aggressive
behavior" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0035011 "melanotic encapsulation
of foreign target" evidence=IMP] [GO:0036062 "presynaptic
periactive zone" evidence=IDA] [GO:0045886 "negative regulation of
synaptic growth at neuromuscular junction" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0007507 EMBL:AE014296 GO:GO:0030155
GO:GO:0007498 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 GO:GO:0002121
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007476 GO:GO:0016321 GO:GO:0048854
Pfam:PF02210 GO:GO:0031987 GO:GO:0001964 GO:GO:0045995
GO:GO:0035011 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0035001 GO:GO:0005606 KO:K06240 EMBL:M96388 EMBL:L07288
EMBL:M75882 PIR:S28399 RefSeq:NP_476617.1 UniGene:Dm.865
ProteinModelPortal:Q00174 SMR:Q00174 MINT:MINT-754541 STRING:Q00174
PaxDb:Q00174 PRIDE:Q00174 GeneID:38723 KEGG:dme:Dmel_CG10236
CTD:38723 FlyBase:FBgn0002526 InParanoid:Q00174 OrthoDB:EOG4KKWHR
ChiTaRS:LanA GenomeRNAi:38723 NextBio:810058 Bgee:Q00174
GermOnline:CG10236 Uniprot:Q00174
Length = 3712
Score = 318 (117.0 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 69/226 (30%), Positives = 102/226 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C +C + G C C YY C C+C+ GS + CNS+G+C C+P G
Sbjct: 603 GKC-NCLNNFAGKQCTLCTAGYYSYPD---CLPCHCDSHGSQGVSCNSDGQCLCQPNFDG 658
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRV 142
+CD C Y+F C+ C C+PAG + C SV G+ + GR+ E +
Sbjct: 659 RQCDSCKEGFYNF--PSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECK- 715
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
N + + ++ C D G +L+ + G+C CKP G +C C
Sbjct: 716 PLYWNLNISNTEGCEICDCWTD----GTISALDTCTSKSGQCPCKPHTQGRRCQECRDGT 771
Query: 203 YDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+D A GCK C C+ GS ++ CD + GQC+C + G C
Sbjct: 772 FDLDSASLFGCKDCSCDVGGSWQSV--CDKISGQCKCHPRITGLAC 815
Score = 316 (116.3 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 79/262 (30%), Positives = 120/262 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTG-----HG-----GHCLDCQGDRDGPNCEKCRDNYYQKSG 50
CNC+G SN C +D+E+ NR G HG G C +CQ + G NC KC+ YY+ G
Sbjct: 333 CNCHGHSNECKYDEEV-NRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKG 391
Query: 51 DNF-----CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 104
++ C+ C C+ S C E G C+C+ CD C +Y G C+ C
Sbjct: 392 KHWNETDVCSPCQCDYFFSTG-HCEEETGNCECRAAFQPPSCDSCAYGYY--GYPNCREC 448
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN G+ N +C++ GQ +++ G + + + F P + + C+ +
Sbjct: 449 ECNLNGT--NGYHCEAESGQQCPCKINFAG-AYCKQCAEGYYGF-P------ECKACECN 498
Query: 165 TYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
GS+ CN + G C+C GD C+RC H F C C+C+ G+
Sbjct: 499 KI-----GSITNDCNVTTGECKCLTNFGGDNCERC--KHGYFNYPTCSYCDCDNQGTESE 551
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
C+ GQC C++ G +C
Sbjct: 552 I--CNKQSGQCICREGFGGPRC 571
Score = 260 (96.6 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 66/203 (32%), Positives = 93/203 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNS-EGRCQCK 78
G CL C + G C C +Y GD C +C+C+ +G+ C+ G C C
Sbjct: 1936 GECLRCLNNTFGAACNLCAPGFY---GDAIKLKNCQSCDCDDLGTQT--CDPFVGVCTCH 1990
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V GD+CDRC +HY F GC++C+C G+ N+ CD G C + + GR
Sbjct: 1991 ENVIGDRCDRCKPDHYGFESGVGCRACDC---GAASNSTQCDPHTGHC-ACKSGVTGRQC 2046
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCD 196
V K ++ G + C + Y G G CN + G+CQC PGV GD+CD
Sbjct: 2047 DRCAVDHWK-YEKDGCTPCN---CNQG-YSRGFG------CNPNTGKCQCLPGVIGDRCD 2095
Query: 197 RCDVNHYDFGEAGCKSCE-CNPA 218
C + GC+ C C+ A
Sbjct: 2096 ACPNRWVLIKDEGCQECNNCHHA 2118
Score = 256 (95.2 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 69/253 (27%), Positives = 111/253 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+C+ + E+ N+ G C+ C+ GP C++C +Y C CNC+
Sbjct: 541 CDCDNQGT----ESEICNK--QSGQCI-CREGFGGPRCDQCLPGFYNYPD---CKPCNCS 590
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS + C++ G+C C G +C C +Y + + C C C+ GS +C+S
Sbjct: 591 STGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPD--CLPCHCDSHGS--QGVSCNS 646
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG----HGGSLNL 176
GQC Q + GR + + NF P+ C D P G G ++
Sbjct: 647 -DGQC-LCQPNFDGRQCDSCK-EGFYNF-PS------CEDCNCD--PAGVIDKFAGCGSV 694
Query: 177 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQ 233
C+CK VTG C+ C +++ + GC+ C+C G++ C S GQ
Sbjct: 695 PVGE--LCKCKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQ 752
Query: 234 CECKDNVEGAQCR 246
C CK + +G +C+
Sbjct: 753 CPCKPHTQGRRCQ 765
Score = 250 (93.1 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 77/256 (30%), Positives = 112/256 (43%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNP 61
N F+ C E+ + +G HC +C+ GP CE C + +Y +S C C C+
Sbjct: 1868 NNFATSC----EI-SESGDQIHC-ECKPGYTGPRCESCANGFYGEPESIGQVCKPCECS- 1920
Query: 62 IGSLNLQ----CNSE-GRC-QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGS 111
G++N + C++ G C +C G C+ C Y G+A C+SC+C+ G
Sbjct: 1921 -GNINPEDQGSCDTRTGECLRCLNNTFGAACNLCAPGFY--GDAIKLKNCQSCDCDDLG- 1976
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-GNRIWDLRRCKRDTYPLGH 170
T CD G C + R + F+ G R D C G
Sbjct: 1977 ---TQTCDPFVGVCTCHENVIGDRC--DRCKPDHYGFESGVGCRACD---C-------G- 2020
Query: 171 GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
S + QC+ G C CK GVTG +CDRC V+H+ + + GC C CN S C+
Sbjct: 2021 AASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGYS--RGFGCNP 2078
Query: 230 VKGQCECKDNVEGAQC 245
G+C+C V G +C
Sbjct: 2079 NTGKCQCLPGVIGDRC 2094
Score = 248 (92.4 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 71/236 (30%), Positives = 98/236 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ ++ F+ + GG C C+ + C CR YY G C C C
Sbjct: 1375 CNCD-YAGSTSFECHPF-----GGQC-QCKPNVIERTCGACRSRYY---GFPDCKPCKC- 1423
Query: 61 PIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNC 118
P ++ C + G C C P V GD C++C N Y F + GC+ C CNP G C
Sbjct: 1424 PNSAM---CEPTTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQC 1480
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ- 177
D G CE Q + GR D N ++ C++ + H L+
Sbjct: 1481 DLFNGTCECRQ-NIEGRA-----------CDVCSNGYFNFPHCEQCSC---HKPGTELEV 1525
Query: 178 CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDS 229
C+ +G C CK V G CD+C Y+ E+ GC +C C T CDS
Sbjct: 1526 CDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFC-----FGKTSRCDS 1576
Score = 220 (82.5 bits), Expect = 4.2e-32, Sum P(2) = 4.2e-32
Identities = 59/191 (30%), Positives = 90/191 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLN--LQCNSE--GR-CQ 76
G CL CQ + DG C+ C++ +Y NF C CNC+P G ++ C S G C+
Sbjct: 648 GQCL-CQPNFDGRQCDSCKEGFY-----NFPSCEDCNCDPAGVIDKFAGCGSVPVGELCK 701
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
CK VTG C+ C +++ + GC+ C+C G++ C S GQC + ++
Sbjct: 702 CKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCP-CKPHTQ 760
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR E R + FD ++ + C D GGS C+ G+C+C P +TG
Sbjct: 761 GRRCQECRDGT---FDLDSASLFGCKDCSCDV-----GGSWQSVCDKISGQCKCHPRITG 812
Query: 193 DKCDRCDVNHY 203
C + H+
Sbjct: 813 LACTQPLTTHF 823
Score = 206 (77.6 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 64/220 (29%), Positives = 97/220 (44%)
Query: 42 RDNYYQKS-----GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY-D 95
R NY++++ D + T + + G+ Q + RC C PG +G C+ C +Y D
Sbjct: 1738 RANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYRD 1797
Query: 96 -FGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
G G C CECN G ++ CD G C Q + G H E R S +
Sbjct: 1798 PSGPYGGYCIPCECN--G---HSETCDCATGICSKCQHGTEGD-HCE-RCVSGYYGNATN 1850
Query: 153 NRIWDLRRCKRDTYPLGHGGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYDFGEA- 208
D C + + + + + G C+CKPG TG +C+ C Y E+
Sbjct: 1851 GTPGDCMICACPLPFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESI 1910
Query: 209 G--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
G CK CEC+ + ++ +CD+ G+C C +N GA C
Sbjct: 1911 GQVCKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAAC 1950
Score = 191 (72.3 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 71/238 (29%), Positives = 98/238 (41%)
Query: 29 CQGDRDGPNCEKCRDNYYQK-SGD--NFCTACNCNPIGSLNLQCNSEGRC-QCKPGVTGD 84
C G +CE C YY+ SG +C C CN S C + G C +C+ G GD
Sbjct: 1778 CPPGYSGHSCEDCAPGYYRDPSGPYGGYCIPCECNG-HSETCDC-ATGICSKCQHGTEGD 1835
Query: 85 KCDRCDVNHYDFGEAG----CKSCECN-PAGSVKNTPNCD-SVKGQCESAQLSSRGRVHT 138
C+RC +Y G C C C P S +C+ S G + G +T
Sbjct: 1836 HCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQIHCECKP-G--YT 1892
Query: 139 ELRVQSRKN-FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ----CNSE-GRC-QCKPGVT 191
R +S N F I + CK P G++N + C++ G C +C
Sbjct: 1893 GPRCESCANGFYGEPESIGQV--CK----PCECSGNINPEDQGSCDTRTGECLRCLNNTF 1946
Query: 192 GDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C Y G+A C+SC+C+ G T CD G C C +NV G +C
Sbjct: 1947 GAACNLCAPGFY--GDAIKLKNCQSCDCDDLG----TQTCDPFVGVCTCHENVIGDRC 1998
Score = 187 (70.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 73/268 (27%), Positives = 99/268 (36%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTA--CN 58
C CNG ++ C D + C CQ G C +C + QK A N
Sbjct: 273 CMCNGHADTC--DVKDPKSPVRILACR-CQHHTCGIQCNECCPGFEQKKWRQNTNARPFN 329
Query: 59 CNPIGSLNLQCNSEGRC-QCK-PGVTGDKCDRCDVN-HYDFGEAGCKSCECNPAGSVKNT 115
C P CN G +CK K D++ HYD G C++C+ N G N
Sbjct: 330 CEP-------CNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGV-CQNCQHNTVGINCNK 381
Query: 116 --PNCDSVKGQ-------CESAQLS---SRGRVHTEL-RVQSRKNFDP-----AGNRIWD 157
P KG+ C Q S G E + R F P +
Sbjct: 382 CKPKYYRPKGKHWNETDVCSPCQCDYFFSTGHCEEETGNCECRAAFQPPSCDSCAYGYYG 441
Query: 158 LRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
C+ L + + S +C CK G C +C +Y F E CK+CECN
Sbjct: 442 YPNCRECECNLNGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPE--CKACECNK 499
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GS+ N +C+ G+C+C N G C
Sbjct: 500 IGSITN--DCNVTTGECKCLTNFGGDNC 525
Score = 185 (70.2 bits), Expect = 4.2e-32, Sum P(2) = 4.2e-32
Identities = 29/65 (44%), Positives = 35/65 (53%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C C P V GD C++C N Y F + GC+ C CNP G CD G CEC+ N+
Sbjct: 1434 GECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQNI 1493
Query: 241 EGAQC 245
EG C
Sbjct: 1494 EGRAC 1498
Score = 176 (67.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 47/139 (33%), Positives = 63/139 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG S C D G C CQ +G +CE+C YY + + C C
Sbjct: 1809 CECNGHSETC--DCAT-------GICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMIC 1859
Query: 58 NCN-PIGSLNL--QCN-SEG----RCQCKPGVTGDKCDRCDVNHYDFGEA-G--CKSCEC 106
C P S N C SE C+CKPG TG +C+ C Y E+ G CK CEC
Sbjct: 1860 ACPLPFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCEC 1919
Query: 107 NPAGSVKNTPNCDSVKGQC 125
+ + ++ +CD+ G+C
Sbjct: 1920 SGNINPEDQGSCDTRTGEC 1938
Score = 156 (60.0 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 69/270 (25%), Positives = 106/270 (39%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C C D Y G+ +C +C+ + +G N C +SG C C N
Sbjct: 421 CECRAAFQPPSCDSCAYGYYGYP-NCRECECNLNGTNGYHCE----AESGQQ-CP-CKIN 473
Query: 61 PIGSLNLQCNSEG--------RCQC-KPG-VTGDKCD------RCDVNHYDFGEAGCKSC 104
G+ QC +EG C+C K G +T D C+ +C N FG C+ C
Sbjct: 474 FAGAYCKQC-AEGYYGFPECKACECNKIGSITND-CNVTTGECKCLTN---FGGDNCERC 528
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS--RKNFD-PAGNR----IWD 157
+ N P C C+ + + + Q R+ F P ++ ++
Sbjct: 529 K----HGYFNYPTCS----YCDCDNQGTESEICNKQSGQCICREGFGGPRCDQCLPGFYN 580
Query: 158 LRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
CK GS + C++ G+C C G +C C +Y + + C C C+
Sbjct: 581 YPDCKPCN--CSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPD--CLPCHCDS 636
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
GS +C+S GQC C+ N +G QC S
Sbjct: 637 HGS--QGVSCNS-DGQCLCQPNFDGRQCDS 663
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 170 HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
+ GS + +C+ G+CQCKP V C C +Y F + CK C+C P N+ C+
Sbjct: 1379 YAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPD--CKPCKC-P-----NSAMCE 1430
Query: 229 SVKGQCECKDNVEGAQC 245
G+C C NV G C
Sbjct: 1431 PTTGECMCPPNVIGDLC 1447
Score = 71 (30.1 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+G C C+ AGS C GQC+CK NV C
Sbjct: 1370 SGALPCNCDYAGSTSF--ECHPFGGQCQCKPNVIERTC 1405
Score = 46 (21.3 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCE 126
+G C C+ AGS C GQC+
Sbjct: 1370 SGALPCNCDYAGSTSF--ECHPFGGQCQ 1395
Score = 38 (18.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 138 TELRVQSRKNFDPAGN 153
+E ++Q+ KN AGN
Sbjct: 2355 SEQKLQAEKNIKDAGN 2370
>ZFIN|ZDB-GENE-021226-2 [details] [associations]
symbol:lamb4 "laminin, beta 4" species:7955 "Danio
rerio" [GO:0005576 "extracellular region" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] ZFIN:ZDB-GENE-021226-2 GO:GO:0007155 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 HSSP:P02468
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 EMBL:AF468050 IPI:IPI00485935 RefSeq:NP_775383.1
UniGene:Dr.120997 ProteinModelPortal:Q8JHV6 STRING:Q8JHV6
PRIDE:Q8JHV6 GeneID:286831 KEGG:dre:286831 CTD:22798
eggNOG:NOG303831 InParanoid:Q8JHV6 KO:K06245 OrthoDB:EOG41G346
NextBio:20806482 ArrayExpress:Q8JHV6 Uniprot:Q8JHV6
Length = 1827
Score = 316 (116.3 bits), Expect = 5.0e-32, Sum P(2) = 5.0e-32
Identities = 70/209 (33%), Positives = 106/209 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ---KSGDN--F 53
CNC+ S +C F+ Y TG GG C DC+ +R GP CE C YYQ +S D+
Sbjct: 334 CNCHSHSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQDPQRSVDDPYA 393
Query: 54 CTACNCNPIGSLNLQ-CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNP 108
C C+C+ GS++ C+ G+C CK + G++CDRC V Y F +GC+ C CN
Sbjct: 394 CIPCDCDLDGSVDRGLCDPVNGQCVCKQNIEGERCDRCKVGFYGFSRDDPSGCQLCRCNF 453
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G+++ CD G+C + + Q + GN ++ C D
Sbjct: 454 LGTIQVGNPCDPTTGRCICEHFAYGSQCD-----QCLPGYWGLGNTVYGCIPCDCDI--- 505
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCD 196
GG+L +C+S +G+C+C+P + G KC+
Sbjct: 506 --GGALKTECSSVDGQCKCRPNMVGQKCN 532
Score = 300 (110.7 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 77/235 (32%), Positives = 108/235 (45%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
GG C C+ + G C+ C Y G N C+ C+C+ GS C+ + G+C C+ G+
Sbjct: 869 GGQC-QCKPNVIGRCCDSCAPLTYGL-GPNGCSPCDCDRSGSTTELCDQTTGQCSCRDGI 926
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
TG +C+RC +Y F C+ C+CN + CD + G C + S GR + E R
Sbjct: 927 TGLQCNRCYPGYYGFPL--CRRCQCNRLADI-----CDPITGDCLDCREHSAGR-NCE-R 977
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR-----CQCKPGVTGDKCD 196
+ DP + + C D G G CN + R C+C PG TG +CD
Sbjct: 978 CEEGYVGDPVSGQPCEPCLCP-DLN--GSGRFFAFSCNKDPRSGAPYCECLPGHTGPQCD 1034
Query: 197 RCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCRS 247
C Y D G CK C CN ++ CD V G+C C N EG +C+S
Sbjct: 1035 SCSPGFYGDLRLPGGRCKECCCNNNIDPRDGDACDPVTGECLRCLHNTEGPRCQS 1089
Score = 261 (96.9 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 67/205 (32%), Positives = 98/205 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---------NSEGR 74
G CL C + +GP C+ C+ YY + C C+C+ G+ + +C G+
Sbjct: 1073 GECLRCLHNTEGPRCQSCKRGYYGNALAQDCKECSCDRRGTDDSKCPAGSPCFCDQDTGQ 1132
Query: 75 CQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C+PGV G C+ CD +++ G+ GC+ C CN ++ CD + GQC Q
Sbjct: 1133 CPCRPGVQGALCNECDDGYWNMDGDYGCQPCNCNREHALNYI--CDKITGQC-LCQPEYG 1189
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTG 192
GR+ E +F GN DL+ C L G+++ C++ G C CKPGVTG
Sbjct: 1190 GRICDEC---GPNHF---GNP--DLQ-CMFCDCNLE--GTVHPACDAYTGECLCKPGVTG 1238
Query: 193 DKCDRCDVNHYDFGEAGCKSCE-CN 216
CD C H + A C+ C CN
Sbjct: 1239 PFCDECAPGHNNNFPA-CEPCHACN 1262
Score = 240 (89.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 76/253 (30%), Positives = 114/253 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ-------KSGDNFCTACNCNPIGSLNLQCNSE-GRC 75
G C+ CQ + G NCE+C+D Y+ K+ + C CNC+ S + +C+ E R
Sbjct: 295 GRCV-CQHNTAGYNCERCQDFYHDAPWRPGGKADSDVCKRCNCH---SHSEKCHFELARY 350
Query: 76 QCKPGVTGDKCDRCDVN------------HYDFGEAG------CKSCECNPAGSVKNTPN 117
GV+G CD C N +Y + C C+C+ GSV +
Sbjct: 351 LATGGVSGGVCDDCRNNRIGPQCELCGPFYYQDPQRSVDDPYACIPCDCDLDGSV-DRGL 409
Query: 118 CDSVKGQCESAQLSSRGRV-HTELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLGHGGSLN 175
CD V GQC Q R ++ DP+G + L RC T +G+
Sbjct: 410 CDPVNGQCVCKQNIEGERCDRCKVGFYGFSRDDPSGCQ---LCRCNFLGTIQVGN----- 461
Query: 176 LQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKG 232
C+ + GRC C+ G +CD+C ++ G GC C+C+ G++K C SV G
Sbjct: 462 -PCDPTTGRCICEHFAYGSQCDQCLPGYWGLGNTVYGCIPCDCDIGGALKT--ECSSVDG 518
Query: 233 QCECKDNVEGAQC 245
QC+C+ N+ G +C
Sbjct: 519 QCKCRPNMVGQKC 531
Score = 230 (86.0 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 79/263 (30%), Positives = 109/263 (41%)
Query: 1 CNC---NGFSNRCF-FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFC 54
C C NG S R F F R+G +C +C GP C+ C +Y + C
Sbjct: 995 CLCPDLNG-SGRFFAFSCNKDPRSG-APYC-ECLPGHTGPQCDSCSPGFYGDLRLPGGRC 1051
Query: 55 TACNCNP-IGSLNLQ-CNS-EGRC-QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPA 109
C CN I + C+ G C +C G +C C +Y A CK C C+
Sbjct: 1052 KECCCNNNIDPRDGDACDPVTGECLRCLHNTEGPRCQSCKRGYYGNALAQDCKECSCDRR 1111
Query: 110 GSVKN-----TPN-CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
G+ + +P CD GQC + +G + E N D G+ C R
Sbjct: 1112 GTDDSKCPAGSPCFCDQDTGQCP-CRPGVQGALCNECD-DGYWNMD--GDYGCQPCNCNR 1167
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
+ H +LN C+ G+C C+P G CD C NH+ + C C+CN G+V
Sbjct: 1168 E-----H--ALNYICDKITGQCLCQPEYGGRICDECGPNHFGNPDLQCMFCDCNLEGTVH 1220
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
P CD+ G+C CK V G C
Sbjct: 1221 --PACDAYTGECLCKPGVTGPFC 1241
Score = 183 (69.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 33/77 (42%), Positives = 41/77 (53%)
Query: 170 HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
H G+ C+ G+CQCKP V G CD C Y G GC C+C+ +GS T CD
Sbjct: 857 HVGAYGSSCSKFGGQCQCKPNVIGRCCDSCAPLTYGLGPNGCSPCDCDRSGST--TELCD 914
Query: 229 SVKGQCECKDNVEGAQC 245
GQC C+D + G QC
Sbjct: 915 QTTGQCSCRDGITGLQC 931
Score = 170 (64.9 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 31/75 (41%), Positives = 40/75 (53%)
Query: 52 NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N +CNC+ +G+ C+ G+CQCKP V G CD C Y G GC C+C+ +G
Sbjct: 848 NGAVSCNCHHVGAYGSSCSKFGGQCQCKPNVIGRCCDSCAPLTYGLGPNGCSPCDCDRSG 907
Query: 111 SVKNTPNCDSVKGQC 125
S T CD GQC
Sbjct: 908 ST--TELCDQTTGQC 920
Score = 148 (57.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 78/278 (28%), Positives = 114/278 (41%)
Query: 1 CNCNGFSNRCF-FDK---ELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ------- 47
C CNG +++C D + + G HG C+ CQ + G NCE+C+D Y+
Sbjct: 267 CFCNGHASQCIPVDGARGDTFTEPGMVHG-RCV-CQHNTAGYNCERCQDFYHDAPWRPGG 324
Query: 48 KSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
K+ + C CNC+ S + +C+ E R GV+G CD C N G C+ C
Sbjct: 325 KADSDVCKRCNCH---SHSEKCHFELARYLATGGVSGGVCDDCRNNR--IGPQ-CELCGP 378
Query: 107 ----NPAGSVKNTPNCDSVKGQCESAQLSSRGRVH-TELRVQSRKNFDPAGNRIWDLRRC 161
+P SV + C + C+ RG + ++N + G R D RC
Sbjct: 379 FYYQDPQRSVDDPYAC--IPCDCDLDGSVDRGLCDPVNGQCVCKQNIE--GERC-D--RC 431
Query: 162 KRDTYPLGH---GGSLNLQCNSEGRCQCKPGVTGDKCD----RCDVNHYDFGEAGCKSCE 214
K Y G +CN G Q G+ CD RC H+ +G C C
Sbjct: 432 KVGFYGFSRDDPSGCQLCRCNFLGTIQ-----VGNPCDPTTGRCICEHFAYGSQ-CDQCL 485
Query: 215 CNPAG---SVKNTPNCD-SVKG--QCECKDNVEGAQCR 246
G +V CD + G + EC +V+G QC+
Sbjct: 486 PGYWGLGNTVYGCIPCDCDIGGALKTECS-SVDG-QCK 521
Score = 81 (33.6 bits), Expect = 5.0e-32, Sum P(2) = 5.0e-32
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
G SC C+ G+ ++ C GQC+CK NV G C S
Sbjct: 849 GAVSCNCHHVGAYGSS--CSKFGGQCQCKPNVIGRCCDS 885
>RGD|1309399 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0007601 "visual perception" evidence=ISO] [GO:0014002
"astrocyte development" evidence=ISO] [GO:0060041 "retina
development in camera-type eye" evidence=ISO] RGD:1309399
GO:GO:0007601 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 OrthoDB:EOG498TZW EMBL:AC105586 IPI:IPI00950417
Ensembl:ENSRNOT00000066978 UCSC:RGD:1309399 ArrayExpress:D3ZYW4
Uniprot:D3ZYW4
Length = 1580
Score = 363 (132.8 bits), Expect = 8.2e-32, P = 8.2e-32
Identities = 62/125 (49%), Positives = 75/125 (60%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+ELY TGHGGHC C+ GP+CE C NYY+ C C+C+
Sbjct: 336 CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTAGPHCEHCEKNYYRWDPKTPCQPCDCH 395
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
P GSL+LQC++ G C CK VTG KCDRC + E GC+ C CN AGS+ CD
Sbjct: 396 PAGSLSLQCDNSGTCPCKLTVTGWKCDRCLPGFHSLSEGGCRPCTCNVAGSLGT---CDP 452
Query: 121 VKGQC 125
G C
Sbjct: 453 RSGNC 457
Score = 301 (111.0 bits), Expect = 4.1e-26, Sum P(2) = 4.1e-26
Identities = 71/201 (35%), Positives = 99/201 (49%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQ-CN-SEGR 74
H G CL C + G +CE C++ +Y + D C C+C+P GS + + CN + G+
Sbjct: 839 HSGRCLRCLHNTTGAHCEHCQEGFYGSALATRPADK-CAPCSCDPRGSSSQKTCNPATGQ 897
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C C P VTG C RC YD GC+SC+C+P GS++N C GQC R
Sbjct: 898 CACLPYVTGRDCSRCSPGFYDLQPGRGCQSCKCHPVGSLEN--KCHPKTGQCPC-----R 950
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
V + + + F G I R C+ PLG + + QC+ C C+PG G
Sbjct: 951 PGVTGQACDRCQLGF--FGFSIKGCRDCRCS--PLG---AASPQCHENSTCVCRPGFVGY 1003
Query: 194 KCDRCDVNHYDF-GEAGCKSC 213
KCDRC N + G+ GC+ C
Sbjct: 1004 KCDRCQDNFFLVDGDTGCQEC 1024
Score = 275 (101.9 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 78/238 (32%), Positives = 103/238 (43%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK--SGD-NFCTACNCNPIGSLNLQCNSEGR---C-Q 76
G CL C +GP+CE+C +Y SG + C C C P G E R C
Sbjct: 732 GICL-CGHHTEGPSCERCMPGFYGNAFSGHADDCQPCPC-P-GQSACTTIPESRDVVCTH 788
Query: 77 CKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C PG G +C+ C+ + G +G C+ C+C+ + NCD G+C
Sbjct: 789 CPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSRNVDLNAVGNCDPHSGRCLRCLH 848
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWD-LRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKP 188
++ G H E Q R D C D P G S CN + G+C C P
Sbjct: 849 NTTG-AHCE-HCQEGFYGSALATRPADKCAPCSCD--P--RGSSSQKTCNPATGQCACLP 902
Query: 189 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
VTG C RC YD GC+SC+C+P GS++N C GQC C+ V G C
Sbjct: 903 YVTGRDCSRCSPGFYDLQPGRGCQSCKCHPVGSLEN--KCHPKTGQCPCRPGVTGQAC 958
Score = 271 (100.5 bits), Expect = 4.8e-23, Sum P(2) = 4.8e-23
Identities = 72/235 (30%), Positives = 101/235 (42%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQK----SG-DNFCTACNCNPIGSLNLQCNSE---GRC-Q 76
C C + G CE C D ++ SG C C C+ LN N + GRC +
Sbjct: 786 CTHCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSRNVDLNAVGNCDPHSGRCLR 845
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C TG C+ C Y A C C C+P GS + C+ GQC
Sbjct: 846 CLHNTTGAHCEHCQEGFYGSALATRPADKCAPCSCDPRGS-SSQKTCNPATGQCACLPYV 904
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGV 190
+ GR + S +D R + CK +P+G SL +C+ + G+C C+PGV
Sbjct: 905 T-GRDCSRC---SPGFYDLQPGR--GCQSCK--CHPVG---SLENKCHPKTGQCPCRPGV 953
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
TG CDRC + + F GC+ C C+P G+ +P C C C+ G +C
Sbjct: 954 TGQACDRCQLGFFGFSIKGCRDCRCSPLGAA--SPQCHE-NSTCVCRPGFVGYKC 1005
Score = 243 (90.6 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 73/219 (33%), Positives = 96/219 (43%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQC--NSEGR--CQCKPGVTGDKCDRCDVNHYD--FGE 98
YY S + C CN S C N G+ C C+ TG C+RC D +
Sbjct: 268 YYAVSDFSVGGRCKCNGHASA---CGPNEAGQLACHCQHNTTGVDCERCLPFFQDRPWAR 324
Query: 99 AGCKSC-ECNPAGSVKNTPNCDSVK---------GQCESAQLSSRGRVHTELRVQSRKNF 148
+ EC P ++ C + G C+ + + G H E KN+
Sbjct: 325 GTAEDANECLPCNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTAGP-HCE---HCEKNY 380
Query: 149 DPAGNRIWDLRR-CKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 206
R WD + C+ D +P GSL+LQC++ G C CK VTG KCDRC +
Sbjct: 381 ----YR-WDPKTPCQPCDCHP---AGSLSLQCDNSGTCPCKLTVTGWKCDRCLPGFHSLS 432
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
E GC+ C CN AGS+ CD G C CK+NVEG C
Sbjct: 433 EGGCRPCTCNVAGSLGT---CDPRSGNCPCKENVEGGLC 468
Score = 178 (67.7 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 73/242 (30%), Positives = 93/242 (38%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQK--SGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPG 80
CL QG G CE C Y ++ G + C C CN G+ C+ + G C C
Sbjct: 685 CLCPQG-YTGQFCEFCALGYKREIPHGGPYTNCIPCTCNQHGT----CDPNTGICLCGHH 739
Query: 81 VTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNC-DSVKGQCESAQLSSRGR 135
G C+RC Y +G C+ C C + P D V C Q RGR
Sbjct: 740 TEGPSCERCMPGFYGNAFSGHADDCQPCPCPGQSACTTIPESRDVVCTHCPPGQ---RGR 796
Query: 136 VHTELRVQSRKN-F--DPAG--NRIWDLRRCKRD-TYPLGHGGSLNLQCNSEGRC-QCKP 188
R +S ++ F DP G RRC+ L G N +S GRC +C
Sbjct: 797 -----RCESCEDGFFGDPLGLSGAPQPCRRCQCSRNVDLNAVG--NCDPHS-GRCLRCLH 848
Query: 189 GVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
TG C+ C Y A C C C+P GS + C+ GQC C V G
Sbjct: 849 NTTGAHCEHCQEGFYGSALATRPADKCAPCSCDPRGS-SSQKTCNPATGQCACLPYVTGR 907
Query: 244 QC 245
C
Sbjct: 908 DC 909
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 30/88 (34%), Positives = 39/88 (44%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
+ G C C+ G C++C ++ S + C C CN GSL G C CK V
Sbjct: 406 NSGTC-PCKLTVTGWKCDRCLPGFHSLS-EGGCRPCTCNVAGSLGTCDPRSGNCPCKENV 463
Query: 82 TGDKCDRCDVNHYDF---GEAGCKSCEC 106
G CDRC ++ AGC SC C
Sbjct: 464 EGGLCDRCRPGTFNLQPHNPAGCSSCFC 491
Score = 39 (18.8 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 35 GPNCEKCRD 43
GP C++C D
Sbjct: 80 GPQCQRCDD 88
Score = 38 (18.4 bits), Expect = 4.1e-26, Sum P(2) = 4.1e-26
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 21 GHGGHCLDCQ 30
GH GH L C+
Sbjct: 654 GHSGHVLLCE 663
>UNIPROTKB|Q9Y6N6 [details] [associations]
symbol:LAMC3 "Laminin subunit gamma-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0000904
"cell morphogenesis involved in differentiation" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=TAS] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0016020 "membrane" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS]
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0016020
GO:GO:0005198 GO:GO:0007601 GO:GO:0005578 GO:GO:0007155
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 eggNOG:NOG235720 HOGENOM:HOG000019301
HOVERGEN:HBG100808 EMBL:AF041835 EMBL:AL583807 EMBL:AL355872
EMBL:AB208887 IPI:IPI00914899 RefSeq:NP_006050.3 UniGene:Hs.201805
ProteinModelPortal:Q9Y6N6 SMR:Q9Y6N6 IntAct:Q9Y6N6
MINT:MINT-7034525 STRING:Q9Y6N6 DMDM:308153586 PaxDb:Q9Y6N6
PRIDE:Q9Y6N6 DNASU:10319 Ensembl:ENST00000361069 GeneID:10319
KEGG:hsa:10319 UCSC:uc004caa.1 CTD:10319 GeneCards:GC09P133884
H-InvDB:HIX0008477 HGNC:HGNC:6494 MIM:604349 MIM:614115
neXtProt:NX_Q9Y6N6 Orphanet:280640 PharmGKB:PA30282 KO:K06247
OrthoDB:EOG498TZW ChiTaRS:LAMC3 GenomeRNAi:10319 NextBio:39119
ArrayExpress:Q9Y6N6 Bgee:Q9Y6N6 CleanEx:HS_LAMC3
Genevestigator:Q9Y6N6 GermOnline:ENSG00000050555 Uniprot:Q9Y6N6
Length = 1575
Score = 358 (131.1 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 60/125 (48%), Positives = 76/125 (60%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G S C FD+EL+ TGHGG C C+ GP+CE+C++N+Y C C+C
Sbjct: 327 CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCQ 386
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GSL+LQC+ G C CKP VTG KCDRC + E GC+ C CNPAGS+ CD
Sbjct: 387 SAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLDT---CDP 443
Query: 121 VKGQC 125
G+C
Sbjct: 444 RSGRC 448
Score = 290 (107.1 bits), Expect = 4.9e-24, P = 4.9e-24
Identities = 78/238 (32%), Positives = 100/238 (42%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNLQCNSE---GRC-Q 76
C C + G CE C D ++ F C C C+ N N + G C +
Sbjct: 774 CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQCSGNVDPNAVGNCDPLSGHCLR 833
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C TGD C+ C Y A C C C+P GSV CD V GQC
Sbjct: 834 CLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSCLP-- 891
Query: 132 SRGRVHTELRVQSRKN---FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCK 187
H R SR FD R R CK +PLG S QC+ + G+C C+
Sbjct: 892 -----HVTARDCSRCYPGFFDLQPGR--GCRSCK--CHPLG---SQEDQCHPKTGQCTCR 939
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
PGVTG CDRC + + F GC++C C+P G+ + C G C C+ EG +C
Sbjct: 940 PGVTGQACDRCQLGFFGFSIKGCRACRCSPLGAA--SAQCHE-NGTCVCRPGFEGYKC 994
Score = 272 (100.8 bits), Expect = 4.0e-22, P = 4.0e-22
Identities = 67/200 (33%), Positives = 97/200 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY-----QKSGDNFCTACNCNPIGSLNLQ--CNS-EGRC 75
GHCL C + G +CE C++ +Y + D C C+C+P GS++ Q C+ G+C
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADK-CMPCSCHPQGSVSEQMPCDPVTGQC 887
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P VT C RC +D GC+SC+C+P GS ++ C GQC + R
Sbjct: 888 SCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQC-----TCRP 940
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
V + + + F G I R C+ PLG + + QC+ G C C+PG G K
Sbjct: 941 GVTGQACDRCQLGF--FGFSIKGCRACRCS--PLG---AASAQCHENGTCVCRPGFEGYK 993
Query: 195 CDRCDVNHYDFGEAG-CKSC 213
CDRC N + + C+ C
Sbjct: 994 CDRCHDNFFLTADGTHCQQC 1013
Score = 258 (95.9 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 77/218 (35%), Positives = 102/218 (46%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQCNSE--GR--CQCKPGVTGDKCDRCDVNHYD----- 95
YY S + C CN S +C + G+ C+C+ TG C+RC D
Sbjct: 259 YYAVSDFSVGGRCKCNGHAS---ECGPDVAGQLACRCQHNTTGTDCERCLPFFQDRPWAR 315
Query: 96 -FGEAGCKSCECNPAG-SVKNTPNCDSVK-----GQCESAQLSSRGRVHTELRVQSRKNF 148
EA + CN +G S + T + + + G+C + + G H E R Q +NF
Sbjct: 316 GTAEAAHECLPCNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGP-HCE-RCQ--ENF 371
Query: 149 DPAGNRIWDLRR-CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
WD R C+ GSL+LQC+ G C CKP VTG KCDRC + E
Sbjct: 372 YH-----WDPRMPCQ--PCDCQSAGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSE 424
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C CNPAGS+ CD G+C CK+NVEG C
Sbjct: 425 GGCRPCTCNPAGSLDT---CDPRSGRCPCKENVEGNLC 459
Score = 243 (90.6 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 67/236 (28%), Positives = 99/236 (41%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK--SGD-NFCTACNC-NPIGSLNLQCNSEGRC-QCK 78
G C+ C +GP+CE+C +Y +G + C C C + + E C C
Sbjct: 720 GICV-CSHHTEGPSCERCLPGFYGNPFAGQADDCQPCPCPGQSACTTIPESREVVCTHCP 778
Query: 79 PGVTGDKCDRCDVNHYD-----FGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
PG G +C+ CD + FG C C+C+ NCD + G C ++
Sbjct: 779 PGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQCSGNVDPNAVGNCDPLSGHCLRCLHNT 838
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGV 190
G H E ++ F + +C +P G S + C+ G+C C P V
Sbjct: 839 TGD-HCE---HCQEGFYGSALAPRPADKCMPCSCHPQG-SVSEQMPCDPVTGQCSCLPHV 893
Query: 191 TGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
T C RC +D GC+SC+C+P GS ++ C GQC C+ V G C
Sbjct: 894 TARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQED--QCHPKTGQCTCRPGVTGQAC 947
Score = 192 (72.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 68/238 (28%), Positives = 86/238 (36%)
Query: 29 CQGDRDGPNCEKCRDNYYQK--SGDNF--CTACNCNPIGSLNLQCN-SEGRCQCKPGVTG 83
C G CE C Y ++ G + C C CN G+ C+ + G C C G
Sbjct: 675 CPTGYTGQFCESCAPGYKREMPQGGPYASCVPCTCNQHGT----CDPNTGICVCSHHTEG 730
Query: 84 DKCDRCDVNHYD--F-GEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
C+RC Y F G+A C+ C C + P V C RGR
Sbjct: 731 PSCERCLPGFYGNPFAGQADDCQPCPCPGQSACTTIPESREVV--CTHCPPGQRGR---R 785
Query: 140 LRVQSRKNF-DPAG----NRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTG 192
V F DP G + +C + P G C+ G C +C TG
Sbjct: 786 CEVCDDGFFGDPLGLFGHPQPCHQCQCSGNVDPNAVGN-----CDPLSGHCLRCLHNTTG 840
Query: 193 DKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D C+ C Y A C C C+P GSV CD V GQC C +V C
Sbjct: 841 DHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSCLPHVTARDC 898
Score = 163 (62.4 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C C+ ++ + + + +TG C C+ G C++C+ ++ S C AC C+
Sbjct: 917 CKCHPLGSQ---EDQCHPKTGQ---CT-CRPGVTGQACDRCQLGFFGFSIKG-CRACRCS 968
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG-CKSC 104
P+G+ + QC+ G C C+PG G KCDRC N + + C+ C
Sbjct: 969 PLGAASAQCHENGTCVCRPGFEGYKCDRCHDNFFLTADGTHCQQC 1013
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 32/86 (37%), Positives = 42/86 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C C+ G C++C ++ S + C C CNP GSL+ GRC CK V G
Sbjct: 399 GTCA-CKPTVTGWKCDRCLPGFHSLS-EGGCRPCTCNPAGSLDTCDPRSGRCPCKENVEG 456
Query: 84 DKCDRCDVNHYDF---GEAGCKSCEC 106
+ CDRC ++ AGC SC C
Sbjct: 457 NLCDRCRPGTFNLQPHNPAGCSSCFC 482
Score = 128 (50.1 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 50/188 (26%), Positives = 67/188 (35%)
Query: 75 CQCKPGVTGDKCDRCDVNHY-DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C C G TG C+ C + + + G C C CN G+ CD G C +
Sbjct: 673 CSCPTGYTGQFCESCAPGYKREMPQGGPYASCVPCTCNQHGT------CDPNTGICVCSH 726
Query: 130 LSSRGRVHTELRVQSR--KNF--DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC- 184
HTE R F +P + D + C P G + + E C
Sbjct: 727 -------HTEGPSCERCLPGFYGNPFAGQADDCQPCP---CP-GQSACTTIPESREVVCT 775
Query: 185 QCKPGVTGDKCDRCDVNHYD-----FGEAG-CKSCECNPAGSVKNTPNCDSVKGQC-ECK 237
C PG G +C+ CD + FG C C+C+ NCD + G C C
Sbjct: 776 HCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQCSGNVDPNAVGNCDPLSGHCLRCL 835
Query: 238 DNVEGAQC 245
N G C
Sbjct: 836 HNTTGDHC 843
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 39/141 (27%), Positives = 55/141 (39%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKC----RDNYYQKS---GDNF 53
C CNG ++ C D G CQ + G +CE+C +D + + +
Sbjct: 271 CKCNGHASECGPDVA-------GQLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAAHE 323
Query: 54 CTACNCNPIGS-------LNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFG-EAGCKSC 104
C CNC+ L GRC C+ G C+RC N Y + C+ C
Sbjct: 324 CLPCNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPC 383
Query: 105 ECNPAGSVKNTPNCDSVKGQC 125
+C AGS+ CD G C
Sbjct: 384 DCQSAGSLHL--QCDDT-GTC 401
>ZFIN|ZDB-GENE-060118-1 [details] [associations]
symbol:lama1 "laminin, alpha 1" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0030903 "notochord development"
evidence=IMP] [GO:0048514 "blood vessel morphogenesis"
evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IGI;IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-060118-1 GO:GO:0001764 GO:GO:0030155 GO:GO:0048514
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043010 GO:GO:0030334
GO:GO:0008045 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031290 Pfam:PF02210
GO:GO:0045995 GO:GO:0030903 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0007634
CTD:284217 HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB
GO:GO:0005606 EMBL:DQ131910 IPI:IPI00492896 RefSeq:NP_001030158.1
UniGene:Dr.94156 ProteinModelPortal:Q45H72 SMR:Q45H72 STRING:Q45H72
GeneID:569971 KEGG:dre:569971 NextBio:20889926 Uniprot:Q45H72
Length = 3075
Score = 357 (130.7 bits), Expect = 8.5e-31, P = 8.5e-31
Identities = 87/252 (34%), Positives = 114/252 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-GDNFCTACNC 59
C CNG + E H G CL C G GP+CE+CRD YY + + C AC C
Sbjct: 852 CECNGNVD----PSEAGRCDTHTGECLKCVGHTAGPHCERCRDGYYGDAIQEKNCQACGC 907
Query: 60 NPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPN 117
GSL+ CN G+C+CK V G CDRC ++ GC+ CECN +G++ + +
Sbjct: 908 YSNGSLSTICNLITGQCECKHNVVGKTCDRCQEGYHGINSGEGCRPCECNQSGAL--SAS 965
Query: 118 CDSV-KGQCESAQLSSR-GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
CD + QC + + R H NF G D C HG
Sbjct: 966 CDEEGRCQCITGVTGDKCDRCH-----HGYYNFKENGCTACD---CAHT-----HGN--- 1009
Query: 176 LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
CN + G C C P G KC++CD H+ G +GCK C C+ GS ++ CD GQ
Sbjct: 1010 --CNGQTGECICPPHTHGLKCEQCDEGHWGHDGVSGCKVCNCSVVGS--SSSQCDLSSGQ 1065
Query: 234 CECKDNVEGAQC 245
C C G C
Sbjct: 1066 CVCALQFSGLTC 1077
Score = 303 (111.7 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 84/264 (31%), Positives = 121/264 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CN + C + G CL C + GP+C++C +Y + + C C
Sbjct: 745 CECNDHATECDIN----------GECLGCAHNTTGPHCDQCLPGFYGDASEGTPDDCQRC 794
Query: 58 NCN-PIGSLN------LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA---G--CKSC 104
+C + S N LQ E C QC+ G TGDKC RC + Y FGE G C C
Sbjct: 795 SCPLTLASNNFSPTCQLQAPGEFICDQCQSGYTGDKCQRC-ADGY-FGEPVVPGQRCSPC 852
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR- 163
ECN CD+ G+C + G H E + R + G+ I + + C+
Sbjct: 853 ECNGNVDPSEAGRCDTHTGECLKCVGHTAGP-HCE---RCRDGY--YGDAIQE-KNCQAC 905
Query: 164 DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
Y GSL+ CN G+C+CK V G CDRC ++ GC+ CECN +G++
Sbjct: 906 GCYS---NGSLSTICNLITGQCECKHNVVGKTCDRCQEGYHGINSGEGCRPCECNQSGAL 962
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +CD +G+C+C V G +C
Sbjct: 963 --SASCDE-EGRCQCITGVTGDKC 983
Score = 301 (111.0 bits), Expect = 7.5e-25, P = 7.5e-25
Identities = 74/231 (32%), Positives = 109/231 (47%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNCNPIGSLNL----QCNSE-GRC-Q 76
C CQ G C++C D Y+ + G C+ C CN G+++ +C++ G C +
Sbjct: 819 CDQCQSGYTGDKCQRCADGYFGEPVVPGQR-CSPCECN--GNVDPSEAGRCDTHTGECLK 875
Query: 77 CKPGVTGDKCDRCDVNHYD--FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C G C+RC +Y E C++C C GS+ C+ + GQCE + G
Sbjct: 876 CVGHTAGPHCERCRDGYYGDAIQEKNCQACGCYSNGSLSTI--CNLITGQCECKH-NVVG 932
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
+ T R Q + +G R C+ G+L+ C+ EGRCQC GVTGDK
Sbjct: 933 K--TCDRCQEGYHGINSGE---GCRPCE-----CNQSGALSASCDEEGRCQCITGVTGDK 982
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CDRC +Y+F E GC +C+C NC+ G+C C + G +C
Sbjct: 983 CDRCHHGYYNFKENGCTACDC-----AHTHGNCNGQTGECICPPHTHGLKC 1028
Score = 234 (87.4 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 67/205 (32%), Positives = 85/205 (41%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C C G C++C YY +N CTAC+C + CN + G C C P
Sbjct: 970 GRC-QCITGVTGDKCDRCHHGYYNFK-ENGCTACDC---AHTHGNCNGQTGECICPPHTH 1024
Query: 83 GDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G KC++CD H+ G +GCK C C+ GS ++ CD GQC A L G
Sbjct: 1025 GLKCEQCDEGHWGHDGVSGCKVCNCSVVGS--SSSQCDLSSGQCVCA-LQFSGLTCDRCA 1081
Query: 142 VQSRKNF--------DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ R NF +P G R + C LG G C G+C CK V G
Sbjct: 1082 LGYR-NFPQCSACDCNPNGTRA---QFCDE---ALGVCG-----CEDHGQCSCKDNVGGR 1129
Query: 194 KCDRCDVNHYDFGE---AGCKSCEC 215
CD C + AGC C C
Sbjct: 1130 GCDECKSGSFGLSALNPAGCSPCFC 1154
Score = 218 (81.8 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 69/240 (28%), Positives = 94/240 (39%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRCQ-CKPG 80
HC +C G +CE C +Y+ G F C C CN + +C+ G C C
Sbjct: 711 HC-ECPWGYSGTSCELCIPGFYRVGGILFGGNCLPCECNDHAT---ECDINGECLGCAHN 766
Query: 81 VTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNCD-SVKGQ--CESAQLS 131
TG CD+C Y G C+ C C P N +P C G+ C+ Q
Sbjct: 767 TTGPHCDQCLPGFYGDASEGTPDDCQRCSC-PLTLASNNFSPTCQLQAPGEFICDQCQSG 825
Query: 132 SRGRVHTELRVQSRKNFDPA--GNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRC-QCK 187
G R +P G R C + P G +C++ G C +C
Sbjct: 826 YTGDKCQ--RCADGYFGEPVVPGQRCSPCE-CNGNVDPSEAG-----RCDTHTGECLKCV 877
Query: 188 PGVTGDKCDRCDVNHYD--FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+RC +Y E C++C C GS+ C+ + GQCECK NV G C
Sbjct: 878 GHTAGPHCERCRDGYYGDAIQEKNCQACGCYSNGSLSTI--CNLITGQCECKHNVVGKTC 935
Score = 189 (71.6 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 57/187 (30%), Positives = 80/187 (42%)
Query: 75 CQCKPGVTGDKCDRCDVNHYD--FGEAGCKSCE------CNPAGSVKNTPNCDSVKGQCE 126
C+C PG G C C +Y E K C P ++ +CD GQC
Sbjct: 1365 CECPPGYAGLSCQECAPGYYRQAVSELNMKGRNRPLIQPCVPCRCSNHSQSCDLHTGQCL 1424
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG---- 182
Q ++ G H V + + + D C PL G S + C EG
Sbjct: 1425 GCQHNTAGE-HCH--VCAAGYYGKVQGSVSDCSLC---ACPL-RGQSFSSTCVLEGAGDF 1477
Query: 183 RC-QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKD 238
RC +C+ G G C+RC V ++ + E G C+ C C+ +GSV + CD+ G+CECK
Sbjct: 1478 RCDRCEEGYEGRYCERCAVGYFGNPSEPGGRCQVCACSESGSVHSV--CDAHTGRCECKP 1535
Query: 239 NVEGAQC 245
V G C
Sbjct: 1536 GVRGHLC 1542
Score = 178 (67.7 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 48/137 (35%), Positives = 67/137 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-SGD-NFCTACN 58
C C+ S C +L H G CL CQ + G +C C YY K G + C+ C
Sbjct: 1407 CRCSNHSQSC----DL-----HTGQCLGCQHNTAGEHCHVCAAGYYGKVQGSVSDCSLCA 1457
Query: 59 CNPIG-SLNLQCNSEG----RC-QCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCECNPA 109
C G S + C EG RC +C+ G G C+RC V ++ + E G C+ C C+ +
Sbjct: 1458 CPLRGQSFSSTCVLEGAGDFRCDRCEEGYEGRYCERCAVGYFGNPSEPGGRCQVCACSES 1517
Query: 110 GSVKNTPNCDSVKGQCE 126
GSV + CD+ G+CE
Sbjct: 1518 GSVHSV--CDAHTGRCE 1532
Score = 155 (59.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 57/213 (26%), Positives = 85/213 (39%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKS-------GDNF-----CTACNC-NPIGSLNLQCNSEGR 74
+C G +C++C YY+++ G N C C C N S +L G+
Sbjct: 1366 ECPPGYAGLSCQECAPGYYRQAVSELNMKGRNRPLIQPCVPCRCSNHSQSCDLHT---GQ 1422
Query: 75 CQ-CKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAG-SVKNTPNCDSVKG-QCESA 128
C C+ G+ C C +Y + C C C G S +T + +C+
Sbjct: 1423 CLGCQHNTAGEHCHVCAAGYYGKVQGSVSDCSLCACPLRGQSFSSTCVLEGAGDFRCDRC 1482
Query: 129 QLSSRGRVHTELRVQSRKN-FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
+ GR V N +P G RC+ GS++ C++ GRC+C
Sbjct: 1483 EEGYEGRYCERCAVGYFGNPSEPGG-------RCQ--VCACSESGSVHSVCDAHTGRCEC 1533
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
KPGV G CD+C+ H E C SC + G
Sbjct: 1534 KPGVRGHLCDQCEERHVLVHEQ-CVSCNDSCTG 1565
Score = 149 (57.5 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 42/142 (29%), Positives = 65/142 (45%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYY---QK 48
CNC+ ++ CF+++ + N G GG C++C+ + G NCE C D YY Q
Sbjct: 334 CNCHNKADDCFYNQTVADLKLSMNTHGQFTGGGVCVNCRHNTAGVNCETCADGYYRPHQV 393
Query: 49 S--GDNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKC--------DRCDVNHYDFG 97
S + C C C+ GS++ C + G++ +C ++CD + F
Sbjct: 394 SPYAEEPCVECQCDMRGSVSPVCIRDDNHANPDAGLSPGQCVCKEGFAGEKCDRCAFGFR 453
Query: 98 EAG-CKSCECNPAGSVKNTPNC 118
+ C CECN GS NT C
Sbjct: 454 DFPVCSRCECNLDGS-HNTDPC 474
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 31/66 (46%), Positives = 35/66 (53%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
S G+C CK G G+KCDRC DF C CECN GS NT C +C CK N
Sbjct: 430 SPGQCVCKEGFAGEKCDRCAFGFRDFPV--CSRCECNLDGS-HNTDPCM----ECVCKAN 482
Query: 240 VEGAQC 245
V G+ C
Sbjct: 483 VMGSHC 488
Score = 143 (55.4 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 32/83 (38%), Positives = 43/83 (51%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS + QC+ S G+C C +G CDRC + + +F + C +C+CNP G+ CD
Sbjct: 1053 GSSSSQCDLSSGQCVCALQFSGLTCDRCALGYRNFPQ--CSACDCNPNGT--RAQFCDEA 1108
Query: 231 --------KGQCECKDNVEGAQC 245
GQC CKDNV G C
Sbjct: 1109 LGVCGCEDHGQCSCKDNVGGRGC 1131
Score = 133 (51.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 54/194 (27%), Positives = 69/194 (35%)
Query: 34 DGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL--QCNSEGRC-QCKPGVTGDKCDRCD 90
DG CEKC N + K+ D F + S+N Q G C C+ G C+ C
Sbjct: 327 DGNTCEKC--NCHNKADDCFYNQTVADLKLSMNTHGQFTGGGVCVNCRHNTAGVNCETCA 384
Query: 91 VNHY------DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
+Y + E C C+C+ GSV +P C S G+ +
Sbjct: 385 DGYYRPHQVSPYAEEPCVECQCDMRGSV--SPVCIRDDNHANPDAGLSPGQCVCKEGFAG 442
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD 204
K D D C R L GS N E C CK V G CD C Y+
Sbjct: 443 EK-CDRCAFGFRDFPVCSRCECNLD--GSHNTDPCME--CVCKANVMGSHCDLCKQGFYN 497
Query: 205 FGEA---GCKSCEC 215
+ GC C C
Sbjct: 498 LQASNPEGCTECFC 511
Score = 109 (43.4 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 27/86 (31%), Positives = 35/86 (40%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ G C++C + C+ C CN GS N E C CK V G
Sbjct: 432 GQCV-CKEGFAGEKCDRCAFGFRDFP---VCSRCECNLDGSHNTDPCME--CVCKANVMG 485
Query: 84 DKCDRCDVNHYDFGEA---GCKSCEC 106
CD C Y+ + GC C C
Sbjct: 486 SHCDLCKQGFYNLQASNPEGCTECFC 511
Score = 64 (27.6 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 25/78 (32%), Positives = 30/78 (38%)
Query: 23 GGHCLDCQ-GDRDGPNCEKCRDNYYQKSGDNFCTACNC--NPIGS---------LNLQC- 69
G C C G RD P C +C N + C C C N +GS NLQ
Sbjct: 442 GEKCDRCAFGFRDFPVCSRCECNLDGSHNTDPCMECVCKANVMGSHCDLCKQGFYNLQAS 501
Query: 70 NSEGRCQCKPGVTGDKCD 87
N EG +C D C+
Sbjct: 502 NPEGCTECFCFGVSDVCE 519
>UNIPROTKB|F1NCH8 [details] [associations]
symbol:F1NCH8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA]
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:AADN02026542 EMBL:AADN02026543 IPI:IPI00589777
Ensembl:ENSGALT00000006123 Uniprot:F1NCH8
Length = 1444
Score = 352 (129.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 59/126 (46%), Positives = 77/126 (61%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+C+G S CF+D EL+ RTG GGHC +C+ + GP CE+CR N+Y+ C C+C+
Sbjct: 327 CDCSGRSEECFYDAELFRRTGRGGHCRNCRDNTAGPRCEQCRQNHYRWEQQAACQPCHCH 386
Query: 61 PIG-SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
P G L QC+S G C CK VTG KC+RC ++ E GC+ C C+PAGSV CD
Sbjct: 387 PAGVPLRPQCDSSGTCTCKANVTGWKCERCKDGYHSLSEGGCRPCTCDPAGSVGT---CD 443
Query: 120 SVKGQC 125
G C
Sbjct: 444 PNTGHC 449
Score = 294 (108.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 83/233 (35%), Positives = 111/233 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTACNCNPIGS-LNLQ-CN-SEGRCQ 76
G CL C + G C++CR +Y S C +CNCNP GS L L+ C+ G+C
Sbjct: 833 GRCLRCLHNTTGEQCQQCRPGFYGDALAPSPAGKCASCNCNPDGSALGLEGCDPGTGQCL 892
Query: 77 CKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
C P V G C C +Y A GCKSCEC+P GS + C +V GQC S Q G
Sbjct: 893 CLPHVLGRTCGLCQHGYYGLQAAVGCKSCECHPVGSQDS--GCHAVTGQC-SCQPGVTG- 948
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
LR ++ G + R C+ + PLG S + QC+ C C+PG G K
Sbjct: 949 ----LRCDRCEH----GFFGFSARGCRACNCSPLG---SASAQCHENSTCLCRPGFVGYK 997
Query: 195 CDRCDVNHY-DFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CDRC N + D + C+ C C G VK+ VK Q E ++ ++ C
Sbjct: 998 CDRCQANFFPDPPSSSCQPCPTCY--GLVKDGVERLRVKLQ-EVEEWLQAPGC 1047
Score = 221 (82.9 bits), Expect = 9.6e-17, P = 9.6e-17
Identities = 78/247 (31%), Positives = 91/247 (36%)
Query: 19 RTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF--CTACNCNPIGSLNLQCNS-EG 73
R G C C G CE C + + G F C C CN G C G
Sbjct: 670 RAGWVEECT-CPPSYTGSFCESCAPGFKRDIPFGGPFVTCVPCTCNQHGD----CEPLSG 724
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+C G C+RC Y G CK C C P+ V C
Sbjct: 725 HCRCLHNTEGPSCERCSPGFYGNPFTGHPDDCKPCPCPGRSPCTQLPSSGEVV--CTHCP 782
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-HGG-SLNL--QCNS-EGRC 184
RG+ EL DP G R +R C P HG LN C+S GRC
Sbjct: 783 PGQRGK-RCELCDDGFFG-DPLGQR-GPVRPC----VPCQCHGNVDLNAVGNCDSVSGRC 835
Query: 185 -QCKPGVTGDKCDRCDVNHY-DF---GEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+C TG++C +C Y D AG C SC CNP GS CD GQC C
Sbjct: 836 LRCLHNTTGEQCQQCRPGFYGDALAPSPAGKCASCNCNPDGSALGLEGCDPGTGQCLCLP 895
Query: 239 NVEGAQC 245
+V G C
Sbjct: 896 HVLGRTC 902
Score = 218 (81.8 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 65/217 (29%), Positives = 92/217 (42%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQC--NSEGR--CQCKPGVTGDKCDRCDVNHYD--FGE 98
YY S + C CN S +C + GR C C+ G C C + D +
Sbjct: 259 YYAISDFSVGGRCKCNGHAS---ECAPDEAGRLVCVCEHNTAGTDCQHCQPFYQDRPWAR 315
Query: 99 AGCKSC-ECNPAGSVKNTPNC--DSVK-------GQCESAQLSSRGRVHTELRVQSRKNF 148
++ EC P + C D+ G C + + ++ G E Q R+N
Sbjct: 316 GTAEAANECLPCDCSGRSEECFYDAELFRRTGRGGHCRNCRDNTAGP-RCE---QCRQN- 370
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
+ W+ + + + G L QC+S G C CK VTG KC+RC ++ E
Sbjct: 371 ----HYRWEQQAACQPCHCHPAGVPLRPQCDSSGTCTCKANVTGWKCERCKDGYHSLSEG 426
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC+ C C+PAGSV CD G C CK+ VEG C
Sbjct: 427 GCRPCTCDPAGSVGT---CDPNTGHCTCKERVEGHLC 460
Score = 156 (60.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C C+ + G CE+C+D Y+ S + C C C+P GS+ + G C CK V G
Sbjct: 400 GTCT-CKANVTGWKCERCKDGYHSLS-EGGCRPCTCDPAGSVGTCDPNTGHCTCKERVEG 457
Query: 84 DKCDRCDVNHYD---FGEAGCKSCEC 106
C+RC ++ + GC SC C
Sbjct: 458 HLCNRCQPGWFNLQPYNPIGCTSCFC 483
Score = 155 (59.6 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 53/185 (28%), Positives = 70/185 (37%)
Query: 75 CQCKPGVTGDKCDRCDVNH---YDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C C P TG C+ C FG C C CN G +C+ + G C
Sbjct: 677 CTCPPSYTGSFCESCAPGFKRDIPFGGPFVTCVPCTCNQHG------DCEPLSGHCRCLH 730
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC-QCKP 188
++ G E R +P D CK P G L + E C C P
Sbjct: 731 -NTEGP-SCE-RCSPGFYGNPFTGHPDD---CKPCPCP-GRSPCTQLPSSGEVVCTHCPP 783
Query: 189 GVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVE 241
G G +C+ CD + G+ G C C+C+ + NCDSV G+C C N
Sbjct: 784 GQRGKRCELCDDGFFGDPLGQRGPVRPCVPCQCHGNVDLNAVGNCDSVSGRCLRCLHNTT 843
Query: 242 GAQCR 246
G QC+
Sbjct: 844 GEQCQ 848
Score = 41 (19.5 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 26 CLDCQGDRDGPNCEKC-RD-NYYQKSG-DNFCTACNCNPIGSLNLQCNS-----EGRCQC 77
CL C D G + E+C D ++++G C C N G QC E + C
Sbjct: 324 CLPC--DCSGRS-EECFYDAELFRRTGRGGHCRNCRDNTAGPRCEQCRQNHYRWEQQAAC 380
Query: 78 KP 79
+P
Sbjct: 381 QP 382
>UNIPROTKB|E1BDK6 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:DAAA02054428 IPI:IPI00904771 UniGene:Bt.7183
Ensembl:ENSBTAT00000057452 NextBio:20873039 ArrayExpress:E1BDK6
Uniprot:E1BDK6
Length = 1802
Score = 274 (101.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 77/240 (32%), Positives = 112/240 (46%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
HGG C C+ G C+ C YY G C AC C+P G+L+ C++ G+C C+ G
Sbjct: 802 HGGQCR-CKPAVVGRRCDLCAPGYYG-FGPTGCQACQCSPEGALSGLCDATSGQCPCRAG 859
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CDRC + F C+ C C+ G + CD G C + + G H E
Sbjct: 860 AFGLRCDRCQRGQWGF--PSCRPCVCH--G---HADECDPNTGTCLGCRDHTGGE-HCE- 910
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL--QCNSEGR-----CQCKPGVTGD 193
R + + DP R+ +C+ P G G + C+ +G C C+ G TG
Sbjct: 911 RCIAGFHGDP---RLPYGGQCRPCPCPEGPGSRRHFATSCHRDGYSQQVVCHCRAGYTGL 967
Query: 194 KCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNT-PN-CDSVKGQC-ECKDNVEGAQC 245
+C+ C H FG+ GC+ CEC+ G++ T P+ CD GQC C + EG +C
Sbjct: 968 RCEACAPGH--FGDPSRPGGGCQPCECS--GNIDPTDPDACDPHSGQCLHCLYHTEGPRC 1023
Score = 254 (94.5 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 63/188 (33%), Positives = 86/188 (45%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC------N---SE 72
H G CL C +GP C C+ ++ ++ C C CN +G+ QC N S
Sbjct: 1007 HSGQCLHCLYHTEGPRCAHCKPGFHGQAARQSCHRCTCNLLGTDARQCPSTDHCNCDPSS 1066
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CDRC N ++ GC+ C C+P+ + P C+ GQC +
Sbjct: 1067 GQCPCLPNVQGLSCDRCAPNFWNLTSGRGCQPCACHPSRA--RGPACNEFTGQCH-CRAG 1123
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D P G QC+ S G C C+PGV
Sbjct: 1124 FGGRTCSEC--QELHWGDPG----LQCRACDCD--PRGIDTP---QCHRSTGHCSCRPGV 1172
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1173 SGVRCDQC 1180
Score = 209 (78.6 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 69/263 (26%), Positives = 103/263 (39%)
Query: 1 CNC-NGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNYY---QKSGDNFCT 55
C C G +R F + R G+ + C+ G CE C ++ + G C
Sbjct: 931 CPCPEGPGSRRHFATSCH-RDGYSQQVVCHCRAGYTGLRCEACAPGHFGDPSRPGGG-CQ 988
Query: 56 ACNCNPIGSLNLQ----CNSE-GRC-QCKPGVTGDKCDRCDVN-HYDFGEAGCKSCECNP 108
C C+ G+++ C+ G+C C G +C C H C C CN
Sbjct: 989 PCECS--GNIDPTDPDACDPHSGQCLHCLYHTEGPRCAHCKPGFHGQAARQSCHRCTCNL 1046
Query: 109 AGS-VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
G+ + P+ D C+ S G+ VQ + D W+L R P
Sbjct: 1047 LGTDARQCPSTDHCN--CDP----SSGQCPCLPNVQGL-SCDRCAPNFWNLTS-GRGCQP 1098
Query: 168 LG-HGG-SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVK 222
H + CN G+C C+ G G C C H+ G+ G C++C+C+P G
Sbjct: 1099 CACHPSRARGPACNEFTGQCHCRAGFGGRTCSECQELHW--GDPGLQCRACDCDPRGI-- 1154
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+TP C G C C+ V G +C
Sbjct: 1155 DTPQCHRSTGHCSCRPGVSGVRC 1177
Score = 205 (77.2 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +CN G +C+CKP V G +CD C +Y FG GC++C+C+P G
Sbjct: 782 NGALPCQCDPQGSLSSECNPHGGQCRCKPAVVGRRCDLCAPGYYGFGPTGCQACQCSPEG 841
Query: 111 SVKNTPNCDSVKGQC 125
++ CD+ GQC
Sbjct: 842 ALSGL--CDATSGQC 854
Score = 204 (76.9 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 67/228 (29%), Positives = 100/228 (43%)
Query: 32 DRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCD 90
DR C+KC + + S +F A + S N+ S G C C+ G +C+ C
Sbjct: 342 DRHSHACKKCECHGHAHSC-HFDMAIY---LASGNV---SGGVCDGCQHNTAGRQCELCR 394
Query: 91 VNHY-----DFGE-AGCKSCECNPAGSVKN---TPNCDSVKGQCESAQLSSRGRVHTELR 141
Y D + A C+SC+C+P GS P+ D G S Q + V
Sbjct: 395 PFFYRDPTKDLRDPAVCRSCDCDPMGSQDGGRCDPHDDPALGLV-SGQCRCKEHVVGSRC 453
Query: 142 VQSRKNF-DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCD 199
Q R F + N +RC+ D GG+ C+ + G C CK VTG C+RC
Sbjct: 454 QQCRDGFFGLSANNPLGCQRCQCDPRGTVPGGT---PCDRNSGACFCKRLVTGQGCNRCL 510
Query: 200 VNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
H+ GC+ C+C+ G++ P C+ GQC C+ ++ G +C
Sbjct: 511 PGHWGLSHDLLGCRPCDCDIGGALD--PQCNEATGQCRCRQHMVGRRC 556
Score = 201 (75.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ +CN G +C+CKP V G +CD C +Y FG GC++C+C+P G++ CD+
Sbjct: 793 GSLSSECNPHGGQCRCKPAVVGRRCDLCAPGYYGFGPTGCQACQCSPEGALSGL--CDAT 850
Query: 231 KGQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 851 SGQCPCRAGAFGLRC 865
Score = 184 (69.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 38/113 (33%), Positives = 57/113 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSL--NLQCN-SEGRCQCK 78
G C C+ G C++CRD ++ S +N C C C+P G++ C+ + G C CK
Sbjct: 440 GQCR-CKEHVVGSRCQQCRDGFFGLSANNPLGCQRCQCDPRGTVPGGTPCDRNSGACFCK 498
Query: 79 PGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
VTG C+RC H+ GC+ C+C+ G++ P C+ GQC Q
Sbjct: 499 RLVTGQGCNRCLPGHWGLSHDLLGCRPCDCDIGGALD--PQCNEATGQCRCRQ 549
Score = 168 (64.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 44/164 (26%), Positives = 76/164 (46%)
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGE---AG 100
C +C+C+P+GS + +C+ G+C+CK V G +C +C + G
Sbjct: 411 CRSCDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSANNPLG 470
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR 160
C+ C+C+P G+V CD G C +L + + L + D G R
Sbjct: 471 CQRCQCDPRGTVPGGTPCDRNSGACFCKRLVTGQGCNRCLPGHWGLSHDLLG-----CRP 525
Query: 161 CKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C D GG+L+ QCN + G+C+C+ + G +C++ ++
Sbjct: 526 CDCDI-----GGALDPQCNEATGQCRCRQHMVGRRCEQVQPGYF 564
Score = 161 (61.7 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 34/106 (32%), Positives = 55/106 (51%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+G ++ C FD +Y +G+ GG C CQ + G CE CR +Y+ +
Sbjct: 351 CECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRQCELCRPFFYRDPTKDLRDPAV 410
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRC 89
C +C+C+P+GS + +C+ G+C+CK V G +C +C
Sbjct: 411 CRSCDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQC 456
Score = 129 (50.5 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 46/176 (26%), Positives = 74/176 (42%)
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C+ EG KP + + C ++ G C+C+P GS+ + C+ GQC
Sbjct: 752 RCHEEGLMPSKP-LPSEACAPLLISLSTLLYNGALPCQCDPQGSLSS--ECNPHGGQCR- 807
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQC 186
+ + GR +L F P G + +C + G+L+ C++ G+C C
Sbjct: 808 CKPAVVGR-RCDLCAPGYYGFGPTGCQAC---QCSPE-------GALSGLCDATSGQCPC 856
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV--KNTPNC----DSVKGQ-CE 235
+ G G +CDRC + F C+ C C+ NT C D G+ CE
Sbjct: 857 RAGAFGLRCDRCQRGQWGF--PSCRPCVCHGHADECDPNTGTCLGCRDHTGGEHCE 910
Score = 52 (23.4 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 97 GEAGCKSCECNPAG--SVKNTPNCD--SVKGQCESAQLS-SRGRVHTELRVQ 143
G+A C + C AG + P C S G A L+ R R HT+ +Q
Sbjct: 1418 GDAPCATSPCGGAGCRDEEGQPRCGGLSCSGAAAMADLALGRAR-HTQAELQ 1468
Score = 37 (18.1 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 206 GEAGCKSCECNPAG--SVKNTPNC 227
G+A C + C AG + P C
Sbjct: 1418 GDAPCATSPCGGAGCRDEEGQPRC 1441
Score = 36 (17.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 15/57 (26%), Positives = 21/57 (36%)
Query: 165 TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
T+ L G L C S G C G R D + G+ C C+ A ++
Sbjct: 1401 THALSLTGINELVCGSPGDAPCATSPCGGAGCR-D----EEGQPRCGGLSCSGAAAM 1452
>UNIPROTKB|F1PEZ5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AAEX03000448
EMBL:AAEX03000449 EMBL:AAEX03000450 EMBL:AAEX03000451
EMBL:AAEX03000452 EMBL:AAEX03000453 Ensembl:ENSCAFT00000036090
Uniprot:F1PEZ5
Length = 3085
Score = 352 (129.0 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 78/230 (33%), Positives = 109/230 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C +C+ + G C++C+ + C C CN GS + C G+C C+PGVTG
Sbjct: 898 GQC-ECKPNVQGRRCDECKPETFGLQSGRGCVPCKCNSFGSKSFDCEESGQCWCQPGVTG 956
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
KCDRC +++F E GC +C+C+ G+ NCD GQC + V +
Sbjct: 957 KKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCDPKTGQC----ICPPNTVGEKCSKC 1007
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNH 202
S + + I + C T GSL+ QCN + G+C C P +G KC C+ H
Sbjct: 1008 SPNTW--GHSIITGCKACNCSTV-----GSLDFQCNINTGQCSCHPKFSGAKCTECNQGH 1060
Query: 203 YDFGEAGCKSCECNPAGSVKNT--PN---CDSVK--GQCECKDNVEGAQC 245
+++ C CEC G+ T P C V GQC CK NVEG C
Sbjct: 1061 WNYPH--CSPCECFLPGTDDRTCDPETKKCSCVDQTGQCTCKVNVEGVHC 1108
Score = 333 (122.3 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 82/250 (32%), Positives = 121/250 (48%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKS-GDNFCTACNCNP 61
N FS C ++ G G C C GP C++C + Y+ Q S C C CN
Sbjct: 779 NNFSPTCHLER------GLGLMCDACPAGYTGPRCDRCAEGYFGQPSVPGGSCQPCQCND 832
Query: 62 IGSLNL--QCNS-EGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNT 115
++ C+S G C+ CKPG G +C+ C ++ D EA C+ C C+ S+ +
Sbjct: 833 NLDFSIPGSCDSLSGSCRICKPGTAGRRCELCADGYFGDAVEAKNCQPCGCHVNSSLSES 892
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
C + GQCE + + +GR E + ++ F R CK +++ GS +
Sbjct: 893 --CHARTGQCE-CKPNVQGRRCDECKPET---FGLQSGR--GCVPCKCNSF-----GSKS 939
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+ NCD GQC
Sbjct: 940 FDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCDPKTGQCI 994
Query: 236 CKDNVEGAQC 245
C N G +C
Sbjct: 995 CPPNTVGEKC 1004
Score = 280 (103.6 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 75/242 (30%), Positives = 110/242 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCN---PIGSLNLQCNSE-G--- 73
G CL+C+ GP+C +C +Y K C C C P + + C+ E G
Sbjct: 734 GECLNCKDHTGGPHCNQCLPGFYGDPSKGTSEDCLPCACPLSIPSNNFSPTCHLERGLGL 793
Query: 74 RCQ-CKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C C G TG +CDRC + FG+ C+ C+CN +CDS+ G C
Sbjct: 794 MCDACPAGYTGPRCDRCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSGSCRI 851
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-H-GGSLNLQCNSE-GRC 184
+ + GR EL F G+ + + + C+ P G H SL+ C++ G+C
Sbjct: 852 CKPGTAGR-RCELCADGY--F---GDAV-EAKNCQ----PCGCHVNSSLSESCHARTGQC 900
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
+CKP V G +CD C + GC C+CN GS + +C+ GQC C+ V G
Sbjct: 901 ECKPNVQGRRCDECKPETFGLQSGRGCVPCKCNSFGS--KSFDCEE-SGQCWCQPGVTGK 957
Query: 244 QC 245
+C
Sbjct: 958 KC 959
Score = 245 (91.3 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 75/245 (30%), Positives = 102/245 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CN F ++ F D E G C CQ G C++C Y+ Q+ G CTAC+
Sbjct: 930 CKCNSFGSKSF-DCE------ESGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACD 978
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + G+C C P G+KC +C N + GCK+C C+ GS+
Sbjct: 979 CSHLGN---NCDPKTGQCICPPNTVGEKCSKCSPNTWGHSIITGCKACNCSTVGSLDF-- 1033
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNF---DPAGNRI--WDLRRCKRDTYPLGHG 171
C+ GQC S G TE Q N+ P + D R C +T
Sbjct: 1034 QCNINTGQC-SCHPKFSGAKCTECN-QGHWNYPHCSPCECFLPGTDDRTCDPETK----- 1086
Query: 172 GSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNC 227
C + G+C CK V G CDRC ++ GC C C A T C
Sbjct: 1087 ---KCSCVDQTGQCTCKVNVEGVHCDRCRPGNFGLDAKNPLGCSQCYCFGA-----TTQC 1138
Query: 228 DSVKG 232
KG
Sbjct: 1139 SEAKG 1143
Score = 239 (89.2 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 44/125 (35%), Positives = 65/125 (52%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C C+ S+ + + RTG C +C+ + G C++C+ + C C CN
Sbjct: 881 CGCHVNSS---LSESCHARTGQ---C-ECKPNVQGRRCDECKPETFGLQSGRGCVPCKCN 933
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+ NCD
Sbjct: 934 SFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCDP 988
Query: 121 VKGQC 125
GQC
Sbjct: 989 KTGQC 993
Score = 220 (82.5 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 49/140 (35%), Positives = 68/140 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRT------GH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R G GG C++C + G NCE C D +++ G
Sbjct: 307 CNCHGKAEECYYDENVARRNLSLNIHGKYIGGGVCINCTQNTAGINCETCIDGFFRPKGV 366
Query: 51 -DNF---CTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
++ C C+C+P+GSLN C + G C CKPG G CDRC Y
Sbjct: 367 SPSYPRPCQPCHCDPVGSLNEVCVKDEKRARRGLAPGSCHCKPGFRGVSCDRC-ARGYT- 424
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK C C+ AGS P
Sbjct: 425 GYPDCKPCNCSGAGSTNEDP 444
Score = 193 (73.0 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 67/237 (28%), Positives = 95/237 (40%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNS-EGRC-QCKPGVTG 83
C G +CE C + + +G F C C C G C+ G C CK G
Sbjct: 689 CPPGYSGSSCESCWPRHRRVNGTVFGGICEPCQC--FGHAE-SCDDLTGECLNCKDHTGG 745
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNCDSVKG---QCESAQLSSRG 134
C++C Y G C C C P N +P C +G C++ G
Sbjct: 746 PHCNQCLPGFYGDPSKGTSEDCLPCAC-PLSIPSNNFSPTCHLERGLGLMCDACPAGYTG 804
Query: 135 -RVHTELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLGHGGSLNLQCNS-EGRCQ-CKPGV 190
R + P G+ + C+ D GS C+S G C+ CKPG
Sbjct: 805 PRCDRCAEGYFGQPSVPGGS----CQPCQCNDNLDFSIPGS----CDSLSGSCRICKPGT 856
Query: 191 TGDKCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +C+ C ++ D EA C+ C C+ S+ + C + GQCECK NV+G +C
Sbjct: 857 AGRRCELCADGYFGDAVEAKNCQPCGCHVNSSLSES--CHARTGQCECKPNVQGRRC 911
Score = 173 (66.0 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 56/190 (29%), Positives = 78/190 (41%)
Query: 75 CQCKPGVTGDKCDRC-----DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
CQC PG +G C+ C VN FG C+ C+C + +CD + G+C + +
Sbjct: 687 CQCPPGYSGSSCESCWPRHRRVNGTVFGGI-CEPCQC-----FGHAESCDDLTGECLNCK 740
Query: 130 LSSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKRDTYPLG-HGGSLNLQCNSE-G--- 182
G H Q F DP+ D C PL + + C+ E G
Sbjct: 741 -DHTGGPHCN---QCLPGFYGDPSKGTSEDCLPC---ACPLSIPSNNFSPTCHLERGLGL 793
Query: 183 RCQ-CKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCE- 235
C C G TG +CDRC + FG+ C+ C+CN +CDS+ G C
Sbjct: 794 MCDACPAGYTGPRCDRCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSGSCRI 851
Query: 236 CKDNVEGAQC 245
CK G +C
Sbjct: 852 CKPGTAGRRC 861
Score = 173 (66.0 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 59/211 (27%), Positives = 86/211 (40%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGD----------NFCTACNCNPIGSLNLQCNSE-GRCQ 76
+C G +CE C +Y+ + C C C+ SL C+ E +CQ
Sbjct: 1344 ECPAGHSGLSCEACGPGFYRLPSEPGSAAARPALGPCVPCQCHGHSSL---CDPETSKCQ 1400
Query: 77 -CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKN-TPNCDSVKG----QCES 127
C+ GD C+RC + +Y C+ C C S N +P+C ++G +C +
Sbjct: 1401 NCQHHTAGDFCERCALGYYGIVRGLPNDCQQCACPLISSSNNFSPSC-VLEGLDDYRCTA 1459
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQC 186
G+ + E R + P + C+ D GSL L C+ + G C C
Sbjct: 1460 CPRGYEGQ-YCE-RCSAGYTGSPRSPG-GTCQECECDPQ-----GSLPLPCDPATGLCTC 1511
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC--EC 215
+PG TG KCD C H G C C EC
Sbjct: 1512 RPGATGPKCDGCQPGHARQGSE-CVFCGDEC 1541
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 47/138 (34%), Positives = 58/138 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACN 58
C C+G S+ C D E C +CQ G CE+C YY + N C C
Sbjct: 1383 CQCHGHSSLC--DPET-------SKCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQQCA 1433
Query: 59 CNPIGSLNL---QCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA-G--CKSCECN 107
C I S N C EG RC C G G C+RC + + G C+ CEC+
Sbjct: 1434 CPLISSSNNFSPSCVLEGLDDYRCTACPRGYEGQYCERCSAGYTGSPRSPGGTCQECECD 1493
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ P CD G C
Sbjct: 1494 PQGSLP-LP-CDPATGLC 1509
Score = 153 (58.9 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 31/64 (48%), Positives = 33/64 (51%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG G CDRC Y G CK C C+ AGS P C G C CK+NVE
Sbjct: 403 GSCHCKPGFRGVSCDRC-ARGYT-GYPDCKPCNCSGAGSTNEDP-CF---GPCNCKENVE 456
Query: 242 GAQC 245
G C
Sbjct: 457 GGDC 460
Score = 146 (56.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 49/187 (26%), Positives = 72/187 (38%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDF----GEAGCKSC--ECNPAGSVKNTPNCDSVKGQCES 127
RC+C G +G C+ C Y G A + C P ++ CD +C++
Sbjct: 1342 RCECPAGHSGLSCEACGPGFYRLPSEPGSAAARPALGPCVPCQCHGHSSLCDPETSKCQN 1401
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL-GHGGSLNLQCNSEG---- 182
Q + G + N D ++C PL + + C EG
Sbjct: 1402 CQHHTAGDFCERCALGYYGIVRGLPN---DCQQC---ACPLISSSNNFSPSCVLEGLDDY 1455
Query: 183 RCQ-CKPGVTGDKCDRCDVNHYDFGEA-G--CKSCECNPAGSVKNTPNCDSVKGQCECKD 238
RC C G G C+RC + + G C+ CEC+P GS+ P CD G C C+
Sbjct: 1456 RCTACPRGYEGQYCERCSAGYTGSPRSPGGTCQECECDPQGSLP-LP-CDPATGLCTCRP 1513
Query: 239 NVEGAQC 245
G +C
Sbjct: 1514 GATGPKC 1520
Score = 67 (28.6 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 71 SEGRCQCKPGVTGDKCDRCDVN-HYDFGEAG-------CKSCECN 107
++ RC+C+ GD CD+C H AG C++C C+
Sbjct: 266 NKSRCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEACNCH 310
Score = 66 (28.3 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
CNC+G + N G C +C+ + +G +C +C+ ++ DN C C
Sbjct: 432 CNCSGAGST--------NEDPCFGPC-NCKENVEGGDCGRCKAGFFNLQEDNHKGCDECF 482
Query: 59 CNPIGSLNLQCNS 71
C+ + +C S
Sbjct: 483 CSGVSD---RCQS 492
Score = 37 (18.1 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 234 CECKDNVEGAQCRS 247
C+C G+ C S
Sbjct: 687 CQCPPGYSGSSCES 700
>UNIPROTKB|F1PVY5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:AAEX03000448 EMBL:AAEX03000449 EMBL:AAEX03000450
EMBL:AAEX03000451 EMBL:AAEX03000452 EMBL:AAEX03000453
Ensembl:ENSCAFT00000001697 Uniprot:F1PVY5
Length = 3109
Score = 352 (129.0 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 78/230 (33%), Positives = 109/230 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C +C+ + G C++C+ + C C CN GS + C G+C C+PGVTG
Sbjct: 921 GQC-ECKPNVQGRRCDECKPETFGLQSGRGCVPCKCNSFGSKSFDCEESGQCWCQPGVTG 979
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
KCDRC +++F E GC +C+C+ G+ NCD GQC + V +
Sbjct: 980 KKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCDPKTGQC----ICPPNTVGEKCSKC 1030
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNH 202
S + + I + C T GSL+ QCN + G+C C P +G KC C+ H
Sbjct: 1031 SPNTW--GHSIITGCKACNCSTV-----GSLDFQCNINTGQCSCHPKFSGAKCTECNQGH 1083
Query: 203 YDFGEAGCKSCECNPAGSVKNT--PN---CDSVK--GQCECKDNVEGAQC 245
+++ C CEC G+ T P C V GQC CK NVEG C
Sbjct: 1084 WNYPH--CSPCECFLPGTDDRTCDPETKKCSCVDQTGQCTCKVNVEGVHC 1131
Score = 333 (122.3 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 82/250 (32%), Positives = 121/250 (48%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKS-GDNFCTACNCNP 61
N FS C ++ G G C C GP C++C + Y+ Q S C C CN
Sbjct: 802 NNFSPTCHLER------GLGLMCDACPAGYTGPRCDRCAEGYFGQPSVPGGSCQPCQCND 855
Query: 62 IGSLNL--QCNS-EGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-GCKSCECNPAGSVKNT 115
++ C+S G C+ CKPG G +C+ C ++ D EA C+ C C+ S+ +
Sbjct: 856 NLDFSIPGSCDSLSGSCRICKPGTAGRRCELCADGYFGDAVEAKNCQPCGCHVNSSLSES 915
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
C + GQCE + + +GR E + ++ F R CK +++ GS +
Sbjct: 916 --CHARTGQCE-CKPNVQGRRCDECKPET---FGLQSGR--GCVPCKCNSF-----GSKS 962
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+ NCD GQC
Sbjct: 963 FDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCDPKTGQCI 1017
Query: 236 CKDNVEGAQC 245
C N G +C
Sbjct: 1018 CPPNTVGEKC 1027
Score = 280 (103.6 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 75/242 (30%), Positives = 110/242 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCN---PIGSLNLQCNSE-G--- 73
G CL+C+ GP+C +C +Y K C C C P + + C+ E G
Sbjct: 757 GECLNCKDHTGGPHCNQCLPGFYGDPSKGTSEDCLPCACPLSIPSNNFSPTCHLERGLGL 816
Query: 74 RCQ-CKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C C G TG +CDRC + FG+ C+ C+CN +CDS+ G C
Sbjct: 817 MCDACPAGYTGPRCDRCAEGY--FGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSGSCRI 874
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-H-GGSLNLQCNSE-GRC 184
+ + GR EL F G+ + + + C+ P G H SL+ C++ G+C
Sbjct: 875 CKPGTAGR-RCELCADGY--F---GDAV-EAKNCQ----PCGCHVNSSLSESCHARTGQC 923
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
+CKP V G +CD C + GC C+CN GS + +C+ GQC C+ V G
Sbjct: 924 ECKPNVQGRRCDECKPETFGLQSGRGCVPCKCNSFGS--KSFDCEE-SGQCWCQPGVTGK 980
Query: 244 QC 245
+C
Sbjct: 981 KC 982
Score = 245 (91.3 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 75/245 (30%), Positives = 102/245 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C CN F ++ F D E G C CQ G C++C Y+ Q+ G CTAC+
Sbjct: 953 CKCNSFGSKSF-DCE------ESGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACD 1001
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + G+C C P G+KC +C N + GCK+C C+ GS+
Sbjct: 1002 CSHLGN---NCDPKTGQCICPPNTVGEKCSKCSPNTWGHSIITGCKACNCSTVGSLDF-- 1056
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNF---DPAGNRI--WDLRRCKRDTYPLGHG 171
C+ GQC S G TE Q N+ P + D R C +T
Sbjct: 1057 QCNINTGQC-SCHPKFSGAKCTECN-QGHWNYPHCSPCECFLPGTDDRTCDPETK----- 1109
Query: 172 GSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNC 227
C + G+C CK V G CDRC ++ GC C C A T C
Sbjct: 1110 ---KCSCVDQTGQCTCKVNVEGVHCDRCRPGNFGLDAKNPLGCSQCYCFGA-----TTQC 1161
Query: 228 DSVKG 232
KG
Sbjct: 1162 SEAKG 1166
Score = 239 (89.2 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 44/125 (35%), Positives = 65/125 (52%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C C+ S+ + + RTG C +C+ + G C++C+ + C C CN
Sbjct: 904 CGCHVNSS---LSESCHARTGQ---C-ECKPNVQGRRCDECKPETFGLQSGRGCVPCKCN 956
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+ NCD
Sbjct: 957 SFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCDP 1011
Query: 121 VKGQC 125
GQC
Sbjct: 1012 KTGQC 1016
Score = 220 (82.5 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 49/140 (35%), Positives = 68/140 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRT------GH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R G GG C++C + G NCE C D +++ G
Sbjct: 312 CNCHGKAEECYYDENVARRNLSLNIHGKYIGGGVCINCTQNTAGINCETCIDGFFRPKGV 371
Query: 51 -DNF---CTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
++ C C+C+P+GSLN C + G C CKPG G CDRC Y
Sbjct: 372 SPSYPRPCQPCHCDPVGSLNEVCVKDEKRARRGLAPGSCHCKPGFRGVSCDRC-ARGYT- 429
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK C C+ AGS P
Sbjct: 430 GYPDCKPCNCSGAGSTNEDP 449
Score = 173 (66.0 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 59/211 (27%), Positives = 86/211 (40%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGD----------NFCTACNCNPIGSLNLQCNSE-GRCQ 76
+C G +CE C +Y+ + C C C+ SL C+ E +CQ
Sbjct: 1367 ECPAGHSGLSCEACGPGFYRLPSEPGSAAARPALGPCVPCQCHGHSSL---CDPETSKCQ 1423
Query: 77 -CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKN-TPNCDSVKG----QCES 127
C+ GD C+RC + +Y C+ C C S N +P+C ++G +C +
Sbjct: 1424 NCQHHTAGDFCERCALGYYGIVRGLPNDCQQCACPLISSSNNFSPSC-VLEGLDDYRCTA 1482
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQC 186
G+ + E R + P + C+ D GSL L C+ + G C C
Sbjct: 1483 CPRGYEGQ-YCE-RCSAGYTGSPRSPG-GTCQECECDPQ-----GSLPLPCDPATGLCTC 1534
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC--EC 215
+PG TG KCD C H G C C EC
Sbjct: 1535 RPGATGPKCDGCQPGHARQGSE-CVFCGDEC 1564
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 47/138 (34%), Positives = 58/138 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACN 58
C C+G S+ C D E C +CQ G CE+C YY + N C C
Sbjct: 1406 CQCHGHSSLC--DPET-------SKCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQQCA 1456
Query: 59 CNPIGSLNL---QCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA-G--CKSCECN 107
C I S N C EG RC C G G C+RC + + G C+ CEC+
Sbjct: 1457 CPLISSSNNFSPSCVLEGLDDYRCTACPRGYEGQYCERCSAGYTGSPRSPGGTCQECECD 1516
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ P CD G C
Sbjct: 1517 PQGSLP-LP-CDPATGLC 1532
Score = 153 (58.9 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 31/64 (48%), Positives = 33/64 (51%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG G CDRC Y G CK C C+ AGS P C G C CK+NVE
Sbjct: 408 GSCHCKPGFRGVSCDRC-ARGYT-GYPDCKPCNCSGAGSTNEDP-CF---GPCNCKENVE 461
Query: 242 GAQC 245
G C
Sbjct: 462 GGDC 465
Score = 146 (56.5 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 49/187 (26%), Positives = 72/187 (38%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDF----GEAGCKSC--ECNPAGSVKNTPNCDSVKGQCES 127
RC+C G +G C+ C Y G A + C P ++ CD +C++
Sbjct: 1365 RCECPAGHSGLSCEACGPGFYRLPSEPGSAAARPALGPCVPCQCHGHSSLCDPETSKCQN 1424
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL-GHGGSLNLQCNSEG---- 182
Q + G + N D ++C PL + + C EG
Sbjct: 1425 CQHHTAGDFCERCALGYYGIVRGLPN---DCQQC---ACPLISSSNNFSPSCVLEGLDDY 1478
Query: 183 RCQ-CKPGVTGDKCDRCDVNHYDFGEA-G--CKSCECNPAGSVKNTPNCDSVKGQCECKD 238
RC C G G C+RC + + G C+ CEC+P GS+ P CD G C C+
Sbjct: 1479 RCTACPRGYEGQYCERCSAGYTGSPRSPGGTCQECECDPQGSLP-LP-CDPATGLCTCRP 1536
Query: 239 NVEGAQC 245
G +C
Sbjct: 1537 GATGPKC 1543
Score = 133 (51.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 54/209 (25%), Positives = 76/209 (36%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPG-VTGDKCDRC-----DVNHYDFGEAGCKSCECNPAG 110
C C P G C + + C VN FG C+ C+C
Sbjct: 692 CQCPP-GYSGSSCEKRQQANASSNLIPASNTKSCWPRHRRVNGTVFGGI-CEPCQC---- 745
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKRDTYPL 168
+ +CD + G+C + + G H Q F DP+ D C PL
Sbjct: 746 -FGHAESCDDLTGECLNCK-DHTGGPHCN---QCLPGFYGDPSKGTSEDCLPC---ACPL 797
Query: 169 G-HGGSLNLQCNSE---G-RCQ-CKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNP 217
+ + C+ E G C C G TG +CDRC + FG+ C+ C+CN
Sbjct: 798 SIPSNNFSPTCHLERGLGLMCDACPAGYTGPRCDRCAEGY--FGQPSVPGGSCQPCQCND 855
Query: 218 AGSVKNTPNCDSVKGQCE-CKDNVEGAQC 245
+CDS+ G C CK G +C
Sbjct: 856 NLDFSIPGSCDSLSGSCRICKPGTAGRRC 884
Score = 67 (28.6 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 71 SEGRCQCKPGVTGDKCDRCDVN-HYDFGEAG-------CKSCECN 107
++ RC+C+ GD CD+C H AG C++C C+
Sbjct: 271 NKSRCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEACNCH 315
Score = 66 (28.3 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
CNC+G + N G C +C+ + +G +C +C+ ++ DN C C
Sbjct: 437 CNCSGAGST--------NEDPCFGPC-NCKENVEGGDCGRCKAGFFNLQEDNHKGCDECF 487
Query: 59 CNPIGSLNLQCNS 71
C+ + +C S
Sbjct: 488 CSGVSD---RCQS 497
>ZFIN|ZDB-GENE-060119-1 [details] [associations]
symbol:lama2 "laminin, alpha 2" species:7955 "Danio
rerio" [GO:0030155 "regulation of cell adhesion" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0060538 "skeletal muscle organ
development" evidence=IMP] [GO:0016203 "muscle attachment"
evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-060119-1 GO:GO:0030155
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:JN786913 Uniprot:G8IHT9
Length = 3124
Score = 351 (128.6 bits), Expect = 3.7e-30, P = 3.7e-30
Identities = 84/235 (35%), Positives = 113/235 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C C+ G C++C + + G C C+CN GS + C+ G+C+C+PGVTG
Sbjct: 920 GQC-QCRQHVIGRQCDECMAGSHLQ-GALGCVPCHCNSFGSKSFDCDESGQCRCQPGVTG 977
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
KCDRC H+ F E GC C+C G+ NCD+ GQC + V
Sbjct: 978 QKCDRCAAGHFSFQEGGCTPCQCAHVGN-----NCDASTGQC----------ICPPNTVG 1022
Query: 144 SRKNFDPAGNRIW--DLRR-CKRDTYPLGHG--GSLNLQCN-SEGRCQCKPGVTGDKCDR 197
R D W D+ CK P G GS+ QCN + G C C+ G+KCD
Sbjct: 1023 ER--CDKCAPNHWGHDISTGCK----PCGCNALGSVAQQCNLNTGCCMCREQFRGEKCDE 1076
Query: 198 CDVNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
C + + DF + C SC+C+ AGS +T + C GQC CK NVEG +C
Sbjct: 1077 CKLGYRDFPQ--CISCQCSAAGSSLDTCDSESGLCACADRSGQCSCKANVEGQKC 1129
Score = 306 (112.8 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/255 (32%), Positives = 117/255 (45%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLD-CQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCN 60
N FS C D G G D C G C++C + Y+ + C C C+
Sbjct: 801 NNFSPTCRVD-------GRGEVICDRCPPGYTGSRCDRCSNGYFGRPNIPGGSCQPCVCS 853
Query: 61 PIGSLN----LQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAG 110
G+L+ L C+ G C +C+ G G C+RC + Y FG+A C++C+C+ G
Sbjct: 854 --GNLDQTAPLSCDPLTGACLRCRKGYGGADCERC-ADGY-FGDALIAKNCQACQCHSNG 909
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
SV C GQC+ Q GR E S + A + C +++
Sbjct: 910 SVSEL--CHQETGQCQCRQ-HVIGRQCDECMAGS--HLQGALGCV----PCHCNSF---- 956
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GS + C+ G+C+C+PGVTG KCDRC H+ F E GC C+C G+ NCD+
Sbjct: 957 -GSKSFDCDESGQCRCQPGVTGQKCDRCAAGHFSFQEGGCTPCQCAHVGN-----NCDAS 1010
Query: 231 KGQCECKDNVEGAQC 245
GQC C N G +C
Sbjct: 1011 TGQCICPPNTVGERC 1025
Score = 296 (109.3 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 84/263 (31%), Positives = 122/263 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY----QKSGDNFCTA 56
C C+G + RC D +L GHCL C+ GPNC +C YY + + D+ C
Sbjct: 742 CQCHGHTERC--D-DLT------GHCLGCRDHTVGPNCGQCAPGYYGDATRGTADD-CQP 791
Query: 57 CNC---NPIGSLNLQCNSEGR----C-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
C C +P + + C +GR C +C PG TG +CDRC N Y FG C P
Sbjct: 792 CACPLLSPANNFSPTCRVDGRGEVICDRCPPGYTGSRCDRCS-NGY-FGRPNIPGGSCQP 849
Query: 109 ---AGSVKNT-P-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
+G++ T P +CD + G C + +G + + F G+ + + C+
Sbjct: 850 CVCSGNLDQTAPLSCDPLTGACLRCR---KGYGGADCERCADGYF---GDALI-AKNCQ- 901
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 222
GS++ C+ E G+CQC+ V G +CD C + G GC C CN GS
Sbjct: 902 -ACQCHSNGSVSELCHQETGQCQCRQHVIGRQCDECMAGSHLQGALGCVPCHCNSFGS-- 958
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ +CD GQC C+ V G +C
Sbjct: 959 KSFDCDE-SGQCRCQPGVTGQKC 980
Score = 248 (92.4 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 67/222 (30%), Positives = 93/222 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
C+CN F ++ F E G C CQ G C++C ++ Q+ G CT C
Sbjct: 951 CHCNSFGSKSFDCDE-------SGQCR-CQPGVTGQKCDRCAAGHFSFQEGG---CTPCQ 999
Query: 59 CNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C +G+ C+ S G+C C P G++CD+C NH+ GCK C CN GSV
Sbjct: 1000 CAHVGN---NCDASTGQCICPPNTVGERCDKCAPNHWGHDISTGCKPCGCNALGSVAQ-- 1054
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
C+ G C + RG E ++ R +F + DT G L
Sbjct: 1055 QCNLNTGCCMCRE-QFRGEKCDECKLGYR-DFPQCISCQCSAAGSSLDTCDSESG--LCA 1110
Query: 177 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
+ G+C CK V G KC+RC + GC C C
Sbjct: 1111 CADRSGQCSCKANVEGQKCERCKSGSFGLSHRNPLGCSRCYC 1152
Score = 222 (83.2 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 55/171 (32%), Positives = 78/171 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C+ C + G C+KC N++ C C CN +GS+ QCN + G C C+
Sbjct: 1012 GQCI-CPPNTVGERCDKCAPNHWGHDISTGCKPCGCNALGSVAQQCNLNTGCCMCREQFR 1070
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G+KCD C + + DF + C SC+C+ AGS +T CDS G C A S G+ + V
Sbjct: 1071 GEKCDECKLGYRDFPQ--CISCQCSAAGSSLDT--CDSESGLCACADRS--GQCSCKANV 1124
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL-QCNSEGRCQCKPGVTG 192
+ +K RCK ++ L H L +C G TG
Sbjct: 1125 EGQK-----------CERCKSGSFGLSHRNPLGCSRCYCFGLSSSCTEATG 1164
Score = 214 (80.4 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 67/232 (28%), Positives = 99/232 (42%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----CTACNCNPIGSLNLQCNSEGRCQCKP 79
G CL C+ G +CE+C D Y+ GD C AC C+ GS++ C+ E
Sbjct: 869 GACLRCRKGYGGADCERCADGYF---GDALIAKNCQACQCHSNGSVSELCHQE------- 918
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNP--AGSVKNTP-NCDSVKGQCESAQLSSRGRV 136
TG +C + G C C G++ P +C+S G +S G+
Sbjct: 919 --TG----QCQCRQHVIGRQ-CDECMAGSHLQGALGCVPCHCNSF-GS-KSFDCDESGQC 969
Query: 137 HTELRVQSRK-NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDK 194
+ V +K + AG+ + C H G+ C+ S G+C C P G++
Sbjct: 970 RCQPGVTGQKCDRCAAGHFSFQEGGCT--PCQCAHVGN---NCDASTGQCICPPNTVGER 1024
Query: 195 CDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD+C NH+ GCK C CN GSV C+ G C C++ G +C
Sbjct: 1025 CDKCAPNHWGHDISTGCKPCGCNALGSVAQ--QCNLNTGCCMCREQFRGEKC 1074
Score = 201 (75.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 49/140 (35%), Positives = 68/140 (48%)
Query: 1 CNCNGFSNRCFF-----DKEL-YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+ S C++ D +L N G GG CL C + G NC+ C D +Y+ SG
Sbjct: 329 CNCHNKSEECYYNQTVADAKLSLNIHGEYEGGGVCLGCSENTGGINCQSCIDGFYRPSGV 388
Query: 52 NF-----CTACNCNPIGSLNLQC---NSE-------GRCQCKPGVTGDKCDRCDVNHYDF 96
+ CT C C+ G+L+ C S+ G C CKPG G++CDRC + F
Sbjct: 389 SPLEPWPCTPCTCDLRGALHSTCVPDESQATTDLPVGSCICKPGYAGERCDRCVFGYAGF 448
Query: 97 GEAGCKSCECNPAGSVKNTP 116
+ C+ C C+ GSV P
Sbjct: 449 PQ--CERCRCSSDGSVNQDP 466
Score = 201 (75.8 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 67/216 (31%), Positives = 93/216 (43%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQ----------KSGDNFCTACNCNPIGSLNLQCNSEGR- 74
C+ QG G +CE+C +Y+ ++G C C CN G + C+ E
Sbjct: 1357 CVCPQGYA-GLSCEECAAGFYRLSVLAGGSASRAGFGSCVRCQCN--GHSD-SCDPETSI 1412
Query: 75 CQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKN-TPNCDSV---KGQCE 126
CQ C+ GDKC+RC Y CK C C N +P C + + +C
Sbjct: 1413 CQNCQHNTVGDKCERCAAGFYGVVRGFTDDCKPCACPLLNPENNFSPTCQTEGFNEYRCT 1472
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPA--GNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GR 183
+ G+ H E R + DP G R CK D Y G+ C+S G+
Sbjct: 1473 ACPEGYEGK-HCE-RCAPGFHGDPGVLGGRC---EECKCDPY-----GAFPSACDSHSGQ 1522
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 219
CQC+PG +G KCD+C H G G SC+ + AG
Sbjct: 1523 CQCRPGASGLKCDQCMERHV-CGPEGIVSCDDDCAG 1557
Score = 187 (70.9 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 69/243 (28%), Positives = 102/243 (41%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNS-EGRCQ-CKPGVTG 83
C DG +CE C Y + +G + C C C+ G +C+ G C C+ G
Sbjct: 711 CPPGYDGTSCEMCALGYRRVNGTIYQGVCELCQCH--GHTE-RCDDLTGHCLGCRDHTVG 767
Query: 84 DKCDRCDVNHYDFGEAG----CKSCEC---NPAGSVKNTPNCDSVKGQ--CESAQLSSRG 134
C +C +Y G C+ C C +PA + T D +G+ C+ G
Sbjct: 768 PNCGQCAPGYYGDATRGTADDCQPCACPLLSPANNFSPTCRVDG-RGEVICDRCPPGYTG 826
Query: 135 -RV-HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN----LQCNS-EGRC-QC 186
R R N P G+ C+ P G+L+ L C+ G C +C
Sbjct: 827 SRCDRCSNGYFGRPNI-PGGS-------CQ----PCVCSGNLDQTAPLSCDPLTGACLRC 874
Query: 187 KPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+ G G C+RC + Y FG+A C++C+C+ GSV C GQC+C+ +V G
Sbjct: 875 RKGYGGADCERC-ADGY-FGDALIAKNCQACQCHSNGSVSEL--CHQETGQCQCRQHVIG 930
Query: 243 AQC 245
QC
Sbjct: 931 RQC 933
Score = 181 (68.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 47/139 (33%), Positives = 64/139 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACN 58
C CNG S+ C D E C +CQ + G CE+C +Y + + C C
Sbjct: 1397 CQCNGHSDSC--DPET-------SICQNCQHNTVGDKCERCAAGFYGVVRGFTDDCKPCA 1447
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVN-HYDFGEAG--CKSCECN 107
C NP + + C +EG RC C G G C+RC H D G G C+ C+C+
Sbjct: 1448 CPLLNPENNFSPTCQTEGFNEYRCTACPEGYEGKHCERCAPGFHGDPGVLGGRCEECKCD 1507
Query: 108 PAGSVKNTPNCDSVKGQCE 126
P G+ + CDS GQC+
Sbjct: 1508 PYGAFPSA--CDSHSGQCQ 1524
Score = 165 (63.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 54/192 (28%), Positives = 78/192 (40%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFG--------EAG---CKSCECNPAGSVKNTPNCDSVK 122
+C C G G C+ C Y AG C C+CN G ++ +CD
Sbjct: 1356 KCVCPQGYAGLSCEECAAGFYRLSVLAGGSASRAGFGSCVRCQCN--G---HSDSCDPET 1410
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL-GHGGSLNLQCNSE 181
C++ Q ++ G + + F D CK PL + + C +E
Sbjct: 1411 SICQNCQHNTVG----DKCERCAAGFYGVVRGFTD--DCKPCACPLLNPENNFSPTCQTE 1464
Query: 182 G----RCQ-CKPGVTGDKCDRCDVN-HYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQ 233
G RC C G G C+RC H D G G C+ C+C+P G+ + CDS GQ
Sbjct: 1465 GFNEYRCTACPEGYEGKHCERCAPGFHGDPGVLGGRCEECKCDPYGAFPSA--CDSHSGQ 1522
Query: 234 CECKDNVEGAQC 245
C+C+ G +C
Sbjct: 1523 CQCRPGASGLKC 1534
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 62/237 (26%), Positives = 97/237 (40%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG-SLNLQCNSEGRCQCKPG- 80
GG C+ C G + + C N + K F C N G S + C + + G
Sbjct: 269 GGMCI-CYG-----HAKACPLNTHTKK---FSCECEHNTCGESCDRCCPAYNQKPWMAGT 319
Query: 81 -VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
+T C++C+ ++ KS EC +V + ++ G+ E + +T
Sbjct: 320 FLTRHVCEKCNCHN--------KSEECYYNQTVADAKLSLNIHGEYEGGGVCLGCSENTG 371
Query: 140 -LRVQSRKN--FDPAGN---RIWDLRRCKRDTYPLGHGGSL--NLQCNSE---GRCQCKP 188
+ QS + + P+G W C D H + Q ++ G C CKP
Sbjct: 372 GINCQSCIDGFYRPSGVSPLEPWPCTPCTCDLRGALHSTCVPDESQATTDLPVGSCICKP 431
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G G++CDRC + F + C+ C C+ GSV P C C CK++VEG C
Sbjct: 432 GYAGERCDRCVFGYAGFPQ--CERCRCSSDGSVNQDP-CQP---PCVCKEHVEGRDC 482
Score = 103 (41.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 22/75 (29%), Positives = 35/75 (46%)
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG----EAGCKSCECNPAGSVKNTPNCDSVK 231
+Q + CQC PG G C+ C + + + C+ C+C+ G +T CD +
Sbjct: 701 IQAGAVEVCQCPPGYDGTSCEMCALGYRRVNGTIYQGVCELCQCH--G---HTERCDDLT 755
Query: 232 GQC-ECKDNVEGAQC 245
G C C+D+ G C
Sbjct: 756 GHCLGCRDHTVGPNC 770
Score = 75 (31.5 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 9 RCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL 65
RC D + N+ C+ C+ +G +C++C+ +Y SG C C C+ + SL
Sbjct: 455 RCSSDGSV-NQDPCQPPCV-CKEHVEGRDCDRCKQGFYHLSGGRVRGCDKCYCSGVASL 511
>UNIPROTKB|F1P420 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0032224
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:NCNSFGS EMBL:AADN02049678 EMBL:AADN02049679 EMBL:AADN02049680
EMBL:AADN02049681 EMBL:AADN02049682 EMBL:AADN02049683
EMBL:AADN02049684 EMBL:AADN02049685 EMBL:AADN02049686
EMBL:AADN02049687 EMBL:AADN02049688 EMBL:AADN02049689
EMBL:AADN02049690 EMBL:AADN02049691 EMBL:AADN02049692
EMBL:AADN02049693 EMBL:AADN02049694 EMBL:AADN02049695
EMBL:AADN02049696 EMBL:AADN02049697 EMBL:AADN02049698
EMBL:AADN02049699 EMBL:AADN02049700 EMBL:AADN02049701
EMBL:AADN02049702 EMBL:AADN02049703 EMBL:AADN02049704
EMBL:AADN02049705 EMBL:AADN02049706 EMBL:AADN02049707
IPI:IPI00582275 Ensembl:ENSGALT00000022704 Uniprot:F1P420
Length = 3090
Score = 349 (127.9 bits), Expect = 6.0e-30, P = 6.0e-30
Identities = 87/252 (34%), Positives = 119/252 (47%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNCNP 61
N FS C FD+ HG C +C GP CE+C + Y+ + C C CN
Sbjct: 779 NNFSPTCHFDQS------HGLICDECPVGYVGPRCERCAEGYFGQPLIPGGSCQPCQCNN 832
Query: 62 IGSLNL--QCNS-EGRCQ-CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVK 113
++ C+S G C CK G TG C+RC + Y FG+A C+ C C+ GS+
Sbjct: 833 NLDFSIPGSCDSLSGACLICKSGTTGQYCERC-ADGY-FGDALDARNCQPCRCHVNGSIS 890
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
CDS GQCE + + GR + ++ F +R C +++ GS
Sbjct: 891 EI--CDSQTGQCE-CKANVIGRQCDTCKPET---FGLQSSR--GCVPCNCNSF-----GS 937
Query: 174 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
+ C+ G+C C+PGVTG KCDRC Y+F E GC C C+ G+ NCD V G+
Sbjct: 938 KSFDCDGNGQCYCQPGVTGKKCDRCAHGFYNFEEGGCTPCACSQFGN-----NCDPVSGR 992
Query: 234 CECKDNVEGAQC 245
C C N G C
Sbjct: 993 CICPPNTIGEMC 1004
Score = 340 (124.7 bits), Expect = 5.4e-29, P = 5.4e-29
Identities = 78/230 (33%), Positives = 113/230 (49%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C +C+ + G C+ C+ + C CNCN GS + C+ G+C C+PGVTG
Sbjct: 898 GQC-ECKANVIGRQCDTCKPETFGLQSSRGCVPCNCNSFGSKSFDCDGNGQCYCQPGVTG 956
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
KCDRC Y+F E GC C C+ G+ NCD V G+C ++ G E+ +
Sbjct: 957 KKCDRCAHGFYNFEEGGCTPCACSQFGN-----NCDPVSGRCICPP-NTIG----EMCDK 1006
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNH 202
N G+ I + CK L G+L+ QC+ + G C C+P +GDKC C +
Sbjct: 1007 CAPNH--WGHDI--VHGCKPCDCSLI--GALSAQCDLNTGCCFCRPEFSGDKCTECRSGY 1060
Query: 203 YDFGEAGCKSCEC-----NPAGSVKNTPNCDSVK--GQCECKDNVEGAQC 245
+++ + C +C+C +P + C V GQC CK NVEG C
Sbjct: 1061 WNYPQ--CIACQCVLSGTDPRSCETDLGTCSCVNHTGQCSCKVNVEGVHC 1108
Score = 265 (98.3 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 69/227 (30%), Positives = 100/227 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G CL C+ G CE+C D Y+ + D C C C+ GS++ C+S+ G+C+CK V
Sbjct: 847 GACLICKSGTTGQYCERCADGYFGDALDARNCQPCRCHVNGSISEICDSQTGQCECKANV 906
Query: 82 TGDKCDRCDVNHYDFGEAGCKSC-ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CD C FG + C CN + +CD GQC Q G+ +
Sbjct: 907 IGRQCDTCKPE--TFGLQSSRGCVPCNCNSFGSKSFDCDG-NGQCY-CQPGVTGK-KCDR 961
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCD 199
NF+ G C + G+ C+ GRC C P G+ CD+C
Sbjct: 962 CAHGFYNFEEGG-----CTPCACSQF-----GN---NCDPVSGRCICPPNTIGEMCDKCA 1008
Query: 200 VNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
NH+ GCK C+C+ G++ + CD G C C+ G +C
Sbjct: 1009 PNHWGHDIVHGCKPCDCSLIGAL--SAQCDLNTGCCFCRPEFSGDKC 1053
Score = 256 (95.2 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 72/240 (30%), Positives = 110/240 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC--N-PIGSLNLQCN---SEGR 74
G CLDC+ + G C++C +Y K C C C N P + + C+ S G
Sbjct: 734 GECLDCKHNTGGSYCDRCLPGFYGDPTKGTAEDCQLCACPLNIPSNNFSPTCHFDQSHGL 793
Query: 75 -C-QCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C +C G G +C+RC + FG+ C+ C+CN +CDS+ G C
Sbjct: 794 ICDECPVGYVGPRCERCAEGY--FGQPLIPGGSCQPCQCNNNLDFSIPGSCDSLSGACLI 851
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
+ + G+ + E F G+ + D R C+ + GS++ C+S+ G+C+C
Sbjct: 852 CKSGTTGQ-YCERCADGY--F---GDAL-DARNCQPCRCHVN--GSISEICDSQTGQCEC 902
Query: 187 KPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
K V G +CD C + + GC C CN GS + +CD GQC C+ V G +C
Sbjct: 903 KANVIGRQCDTCKPETFGLQSSRGCVPCNCNSFGS--KSFDCDG-NGQCYCQPGVTGKKC 959
Score = 242 (90.2 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 73/226 (32%), Positives = 97/226 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCN F ++ F D + G+G C CQ G C++C +Y + CT C C+
Sbjct: 930 CNCNSFGSKSF-DCD-----GNG-QCY-CQPGVTGKKCDRCAHGFYNFE-EGGCTPCACS 980
Query: 61 PIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNC 118
G+ C+ GRC C P G+ CD+C NH+ GCK C+C+ G++ + C
Sbjct: 981 QFGN---NCDPVSGRCICPPNTIGEMCDKCAPNHWGHDIVHGCKPCDCSLIGAL--SAQC 1035
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDP--AGNRIW---DLRRCKRDTYPLGHGGS 173
D G C S G TE R N+ A + D R C+ D LG
Sbjct: 1036 DLNTGCCFCRPEFS-GDKCTECR-SGYWNYPQCIACQCVLSGTDPRSCETD---LG---- 1086
Query: 174 LNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
C N G+C CK V G CDRC + GC SC C
Sbjct: 1087 -TCSCVNHTGQCSCKVNVEGVHCDRCKSGTFGLSARNPLGCSSCYC 1131
Score = 221 (82.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 77/240 (32%), Positives = 98/240 (40%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNS-EGRC-QCKPGVT 82
DC G +CE C + + +G F CT C C G C+ G C CK
Sbjct: 688 DCPPGYAGTSCEYCWPQHRRVNGTIFGGVCTPCTC--FGHAE-SCDDITGECLDCKHNTG 744
Query: 83 GDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNC--DSVKGQ-CESAQLSSR 133
G CDRC Y G C+ C C P N +P C D G C+ +
Sbjct: 745 GSYCDRCLPGFYGDPTKGTAEDCQLCAC-PLNIPSNNFSPTCHFDQSHGLICDECPVGYV 803
Query: 134 G-RVHTELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLGHGGSLNLQCNS-EGRCQ-CKPG 189
G R + P G+ + C+ + GS C+S G C CK G
Sbjct: 804 GPRCERCAEGYFGQPLIPGGS----CQPCQCNNNLDFSIPGS----CDSLSGACLICKSG 855
Query: 190 VTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
TG C+RC + Y FG+A C+ C C+ GS+ CDS GQCECK NV G QC
Sbjct: 856 TTGQYCERC-ADGY-FGDALDARNCQPCRCHVNGSISEI--CDSQTGQCECKANVIGRQC 911
Score = 204 (76.9 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 49/149 (32%), Positives = 73/149 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRT------GH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + +R G GG C++C DG NCE C D Y++ G
Sbjct: 306 CNCHGKTEECYYDQNVADRNQSLNIFGEYIGGGVCVNCTSHTDGINCETCVDGYFRPKGV 365
Query: 51 --DNF--CTACNCNPIGSLNLQC-----NSEGR-----CQCKPGVTGDKCDRCDVNHYDF 96
D+ C C+C+P GSL+ C ++EG C CK G G+ C RC + + +
Sbjct: 366 LPDSPDPCQPCSCDPNGSLHETCVKDEKHAEGDMLPGFCHCKTGYAGEHCSRCALGYTGY 425
Query: 97 GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ C C C SV+ + N D G C
Sbjct: 426 PD--CLPCNC----SVEGSANIDPCVGLC 448
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/217 (25%), Positives = 86/217 (39%)
Query: 28 DCQGDRDGPNCEKCRDNYYQ---KSGDNF-------CTACNCNPIGSLNLQCNSEGR-CQ 76
DC G +CE C +Y+ G C C C+ ++ C+ + CQ
Sbjct: 1346 DCPLGYSGLSCESCSPGFYRLPASHGGRIPSQSLGACVVCQCHGHSTM---CDPKTSVCQ 1402
Query: 77 -CKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKN-TPNCDSVKG----QCES 127
C+ G C+RC + Y + C+ C C + S N +P+C V+G +C +
Sbjct: 1403 NCQHNTAGQHCERCALGFYGIIQGSPEDCQPCACPLSISSNNFSPSC-VVEGPSDYRCTA 1461
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQC 186
G+ N G + C+ D Y GS+ + C+ + G C C
Sbjct: 1462 CPPGYEGQYCERCSPGYTGNPQTPGG---SCQECECDQY-----GSMPVPCDPATGVCTC 1513
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
KPG TG KC C+ + Y C SC+ G + N
Sbjct: 1514 KPGFTGWKCAGCE-HRYARDGMKCISCDDECTGLLLN 1549
Score = 148 (57.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 51/188 (27%), Positives = 74/188 (39%)
Query: 75 CQCKPGVTGDKCDRC-----DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C C PG G C+ C VN FG C C C + +CD + G+C +
Sbjct: 687 CDCPPGYAGTSCEYCWPQHRRVNGTIFGGV-CTPCTC-----FGHAESCDDITGECLDCK 740
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-HGGSLNLQCN---SEGR-C 184
++ G + + R DP D + C PL + + C+ S G C
Sbjct: 741 HNTGGS-YCD-RCLPGFYGDPTKGTAEDCQLC---ACPLNIPSNNFSPTCHFDQSHGLIC 795
Query: 185 -QCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCE-CK 237
+C G G +C+RC + FG+ C+ C+CN +CDS+ G C CK
Sbjct: 796 DECPVGYVGPRCERCAEGY--FGQPLIPGGSCQPCQCNNNLDFSIPGSCDSLSGACLICK 853
Query: 238 DNVEGAQC 245
G C
Sbjct: 854 SGTTGQYC 861
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/139 (32%), Positives = 60/139 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C C+G S C D + C +CQ + G +CE+C +Y Q S ++ C C
Sbjct: 1385 CQCHGHSTMC--DPKT-------SVCQNCQHNTAGQHCERCALGFYGIIQGSPED-CQPC 1434
Query: 58 NCN-PIGSLNLQ--CNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
C I S N C EG RC C PG G C+RC + + C+ CEC
Sbjct: 1435 ACPLSISSNNFSPSCVVEGPSDYRCTACPPGYEGQYCERCSPGYTGNPQTPGGSCQECEC 1494
Query: 107 NPAGSVKNTPNCDSVKGQC 125
+ GS+ P CD G C
Sbjct: 1495 DQYGSMP-VP-CDPATGVC 1511
Score = 143 (55.4 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 52/204 (25%), Positives = 77/204 (37%)
Query: 62 IGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF--GEAG---------CKSCECNPAG 110
+ + Q N +C C G +G C+ C Y G C C+C+
Sbjct: 1332 VSGMTPQANLIEQCDCPLGYSGLSCESCSPGFYRLPASHGGRIPSQSLGACVVCQCHGHS 1391
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG- 169
++ CD C++ Q ++ G+ H E + F G C+ PL
Sbjct: 1392 TM-----CDPKTSVCQNCQHNTAGQ-HCE---RCALGF--YGIIQGSPEDCQPCACPLSI 1440
Query: 170 HGGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSV 221
+ + C EG RC C PG G C+RC + + C+ CEC+ GS+
Sbjct: 1441 SSNNFSPSCVVEGPSDYRCTACPPGYEGQYCERCSPGYTGNPQTPGGSCQECECDQYGSM 1500
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
P CD G C CK G +C
Sbjct: 1501 P-VP-CDPATGVCTCKPGFTGWKC 1522
Score = 138 (53.6 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 36/114 (31%), Positives = 51/114 (44%)
Query: 1 CNC--NG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTAC 57
C+C NG C D++ G C C+ G +C +C Y +G C C
Sbjct: 376 CSCDPNGSLHETCVKDEKHAEGDMLPGFC-HCKTGYAGEHCSRCALGY---TGYPDCLPC 431
Query: 58 NCNPIGSLNLQ-CNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECN 107
NC+ GS N+ C G C CK V G+ CDRC ++ + GC+ C C+
Sbjct: 432 NCSVEGSANIDPC--VGLCVCKEHVEGENCDRCKSGFFNLQQNNPKGCEECFCS 483
Score = 126 (49.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G+ C RC + + + + C C C SV+ + N D G C CK++VE
Sbjct: 402 GFCHCKTGYAGEHCSRCALGYTGYPD--CLPCNC----SVEGSANIDPCVGLCVCKEHVE 455
Query: 242 GAQC 245
G C
Sbjct: 456 GENC 459
Score = 84 (34.6 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 172 GSLNLQ-CNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECN 216
GS N+ C G C CK V G+ CDRC ++ + GC+ C C+
Sbjct: 437 GSANIDPC--VGLCVCKEHVEGENCDRCKSGFFNLQQNNPKGCEECFCS 483
Score = 83 (34.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 1 CNC--NGFSNR-CFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCT 55
C C +G R C D + H G C C+ + +G +C++C+ + S N C+
Sbjct: 1069 CQCVLSGTDPRSCETDLGTCSCVNHTGQC-SCKVNVEGVHCDRCKSGTFGLSARNPLGCS 1127
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVT 82
+C C G L QC SE R + VT
Sbjct: 1128 SCYC--FG-LTTQC-SEARGLIRTWVT 1150
Score = 71 (30.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCNS 71
G C+ C+ +G NC++C+ ++ Q++ C C C+ G N+ C S
Sbjct: 446 GLCV-CKEHVEGENCDRCKSGFFNLQQNNPKGCEECFCS--GKTNV-CTS 491
Score = 57 (25.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 75 CQCKPGVTGDKCDRC 89
CQC+ G+ CDRC
Sbjct: 269 CQCEHNTCGETCDRC 283
Score = 46 (21.3 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 212 SCECNPAGSVKN-TPNCDSVKGQCECKDNVEGAQCRS 247
S E G V TP + ++ QC+C G C S
Sbjct: 1323 SMEVAEGGVVSGMTPQANLIE-QCDCPLGYSGLSCES 1358
>UNIPROTKB|E1BXK1 [details] [associations]
symbol:LAMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] GO:GO:0008201 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610
OMA:DRCLPCN EMBL:AADN02034184 EMBL:AADN02034183 IPI:IPI00588334
Ensembl:ENSGALT00000007372 ArrayExpress:E1BXK1 Uniprot:E1BXK1
Length = 1175
Score = 333 (122.3 bits), Expect = 8.3e-29, P = 8.3e-29
Identities = 60/134 (44%), Positives = 82/134 (61%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD +L TG+G CL C G+ G +CE+C++ YY++ + C C C+
Sbjct: 26 CDCNGMSRQCVFDWQLLMETGNGYRCLGCLGNTAGAHCERCKEGYYRQQDGDCCLPCRCH 85
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC-------KS--CECNPAGS 111
P GSL+ QC+S GRC C+PGV G+KCDRC + EAGC +S C C+PAG
Sbjct: 86 PQGSLSTQCDSNGRCSCRPGVMGEKCDRCQPGFHSLSEAGCCPHCPRCRSQLCACDPAG- 144
Query: 112 VKNTPNCDSVKGQC 125
T +C V G+C
Sbjct: 145 ---TGDC--VSGRC 153
Score = 187 (70.9 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 39/83 (46%), Positives = 49/83 (59%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC-------KS--CECNPAGSVK 222
GSL+ QC+S GRC C+PGV G+KCDRC + EAGC +S C C+PAG
Sbjct: 88 GSLSTQCDSNGRCSCRPGVMGEKCDRCQPGFHSLSEAGCCPHCPRCRSQLCACDPAG--- 144
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
T +C V G+C CK V G +C
Sbjct: 145 -TGDC--VSGRCICKVGVTGERC 164
Score = 170 (64.9 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 54/174 (31%), Positives = 73/174 (41%)
Query: 56 ACNCNPIG-------SLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAGC-KSCEC 106
AC+CN + L ++ + RC C G C+RC +Y + C C C
Sbjct: 25 ACDCNGMSRQCVFDWQLLMETGNGYRCLGCLGNTAGAHCERCKEGYYRQQDGDCCLPCRC 84
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR--IWDLRRCKRD 164
+P GS+ CDS G+C S R V E + + F RC+
Sbjct: 85 HPQGSLST--QCDS-NGRC-----SCRPGVMGEKCDRCQPGFHSLSEAGCCPHCPRCRSQ 136
Query: 165 TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
G+ + C S GRC CK GVTG++CDRC N Y+ AGC C C
Sbjct: 137 LCACDPAGTGD--CVS-GRCICKVGVTGERCDRCKQNFYNLDARNPAGCSPCFC 187
Score = 164 (62.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 54/190 (28%), Positives = 77/190 (40%)
Query: 22 HGGHCLD-----C-QGDRDGPNCEKCR-DNYYQKSGDNFCTACNCNPIGSLN-LQCNSEG 73
HGG D C GD + N C +Y + C AC C S + L E
Sbjct: 417 HGGGICDPDTGECYSGDENVGNSISCPFGSYRDPRPPHSCRACPCGHGQSCSVLPGQEEV 476
Query: 74 RCQ-CKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C C PG G +C+ C ++ A C+ C+CN NCD G+C
Sbjct: 477 VCDHCPPGAAGPRCEFCADGYFGDPAASQPCRPCQCNSNVEPNAVGNCDRRTGECLKCIY 536
Query: 131 SSRGRVHTELRVQSRKNFDP-AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPG 189
++ G H E R + +P A N R C ++ G+ L C ++G C CKPG
Sbjct: 537 NTAG-FHCE-RCKDGFFGNPLAPNPADKCRACNCNSV-----GAEPLMCRNDGSCICKPG 589
Query: 190 VTGDKCDRCD 199
G C++ +
Sbjct: 590 FGGPNCEQSE 599
Score = 162 (62.1 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 53/182 (29%), Positives = 68/182 (37%)
Query: 74 RCQCKPGVTGDKCDRCDVNHY-DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
RCQC G G C+RC + D G C C C+ G CD G+C S
Sbjct: 379 RCQCPDGYQGQFCERCAAGYRRDAPHMGPFSICVPCNCHGGGI------CDPDTGECYSG 432
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN-LQCNSEGRCQ-C 186
+ V + DP R C P GHG S + L E C C
Sbjct: 433 DEN----VGNSISCPFGSYRDPRPPH--SCRAC-----PCGHGQSCSVLPGQEEVVCDHC 481
Query: 187 KPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGA 243
PG G +C+ C ++ A C+ C+CN NCD G+C +C N G
Sbjct: 482 PPGAAGPRCEFCADGYFGDPAASQPCRPCQCNSNVEPNAVGNCDRRTGECLKCIYNTAGF 541
Query: 244 QC 245
C
Sbjct: 542 HC 543
Score = 156 (60.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
C CN SN + N G CL C + G +CE+C+D ++ + + C A
Sbjct: 510 CQCN--SN--VEPNAVGNCDRRTGECLKCIYNTAGFHCERCKDGFFGNPLAPNPADKCRA 565
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCD 90
CNCN +G+ L C ++G C CKPG G C++ +
Sbjct: 566 CNCNSVGAEPLMCRNDGSCICKPGFGGPNCEQSE 599
Score = 67 (28.6 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNC 59
G C+ C+ G C++C+ N+Y N C+ C C
Sbjct: 151 GRCI-CKVGVTGERCDRCKQNFYNLDARNPAGCSPCFC 187
>UNIPROTKB|Q13753 [details] [associations]
symbol:LAMC2 "Laminin subunit gamma-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008201 "heparin binding"
evidence=IEA] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779 GO:GO:0005938
GO:GO:0048471 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 GO:GO:0005615 GO:GO:0008201
GO:GO:0007155 EMBL:CH471067 PROSITE:PS00022 Reactome:REACT_111155
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0031581 Orphanet:79402
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 MIM:226700 Orphanet:79404 GO:GO:0005610
GO:GO:0005607 EMBL:AL354953 EMBL:Z15008 EMBL:Z15009 EMBL:X73902
EMBL:U31201 EMBL:U31178 EMBL:U31179 EMBL:U31180 EMBL:U31181
EMBL:U31182 EMBL:U31183 EMBL:U31184 EMBL:U31186 EMBL:U31187
EMBL:U31188 EMBL:U31189 EMBL:U31190 EMBL:U31191 EMBL:U31192
EMBL:U31193 EMBL:U31194 EMBL:U31195 EMBL:U31196 EMBL:U31197
EMBL:U31198 EMBL:U31199 EMBL:U31200 EMBL:BC113378 IPI:IPI00015117
IPI:IPI00220572 PIR:A44018 RefSeq:NP_005553.2 RefSeq:NP_061486.2
UniGene:Hs.591484 ProteinModelPortal:Q13753 SMR:Q13753 DIP:DIP-190N
MINT:MINT-4053464 STRING:Q13753 Allergome:8331 PhosphoSite:Q13753
DMDM:90185107 PaxDb:Q13753 PeptideAtlas:Q13753 PRIDE:Q13753
Ensembl:ENST00000264144 Ensembl:ENST00000493293 GeneID:3918
KEGG:hsa:3918 UCSC:uc001gpz.4 UCSC:uc001gqa.2 CTD:3918
GeneCards:GC01P183155 HGNC:HGNC:6493 HPA:CAB004257 HPA:HPA024638
MIM:150292 neXtProt:NX_Q13753 PharmGKB:PA30281 eggNOG:NOG285700
HOVERGEN:HBG062127 InParanoid:Q13753 KO:K06246 OMA:DRCLPCN
OrthoDB:EOG4ZCT3N PhylomeDB:Q13753 ChiTaRS:LAMC2 GenomeRNAi:3918
NextBio:15391 PMAP-CutDB:Q13753 ArrayExpress:Q13753 Bgee:Q13753
CleanEx:HS_LAMC2 Genevestigator:Q13753 GermOnline:ENSG00000058085
Uniprot:Q13753
Length = 1193
Score = 333 (122.3 bits), Expect = 8.5e-29, P = 8.5e-29
Identities = 60/141 (42%), Positives = 86/141 (60%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + DG +CEKC++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSV 112
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIA 147
Query: 113 KNTPNCDSVKGQCESAQLSSR 133
P CD+ + C+ A R
Sbjct: 148 G--P-CDAGRCVCKPAVTGER 165
Score = 189 (71.6 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 63/210 (30%), Positives = 92/210 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPN--CEKCRDNYYQKSGD-NFCTAC 57
CNC G C D + TG DC + P+ C C +Y D C C
Sbjct: 416 CNCQG-GGAC--DPD----TG------DCYSGDENPDIECADCPIGFYNDPHDPRSCKPC 462
Query: 58 NCNPIGSLNLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPA 109
C+ S ++ +E C C PGVTG +C+ C ++ FGE G C+ C+CN
Sbjct: 463 PCHNGFSCSVMPETEEVVCNNCPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNN 522
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DP-AGNRIWDLRRCKRDTY 166
+ NCD + G+C ++ G ++ + Q + + DP A N R C +
Sbjct: 523 VDPSASGNCDRLTGRCLKCIHNTAG-IYCD---QCKAGYFGDPLAPNPADKCRACNCN-- 576
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
P+G S + C S+G C CKPG G C+
Sbjct: 577 PMG---SEPVGCRSDGTCVCKPGFGGPNCE 603
Score = 174 (66.3 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 36/82 (43%), Positives = 48/82 (58%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 90 GSLSARCDNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
P CD+ G+C CK V G +C
Sbjct: 149 -P-CDA--GRCVCKPAVTGERC 166
Score = 164 (62.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 51/157 (32%), Positives = 68/157 (43%)
Query: 65 LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVK 122
L+ Q + RC C G C++C Y E C C CN GS+ + CD+
Sbjct: 43 LHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCNSKGSL--SARCDN-S 99
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAG-NRIWDLRRCKRDTYPLGHGGSLNLQCNSE 181
G+C S + G + + AG + L K D P G G C++
Sbjct: 100 GRC-SCKPGVTG-ARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAGP----CDA- 152
Query: 182 GRCQCKPGVTGDKCDRCDVNHY--DFGEA-GCKSCEC 215
GRC CKP VTG++CDRC +Y D G GC C C
Sbjct: 153 GRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 151 (58.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 55/188 (29%), Positives = 75/188 (39%)
Query: 74 RCQCKPGVTGDKCDRCDVNHY-DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
+C C G G C C + D G C C C G+ CD G C S
Sbjct: 381 QCICPVGYKGQFCQDCASGYKRDSARLGPFGTCIPCNCQGGGA------CDPDTGDCYS- 433
Query: 129 QLSSRGRVHTELRVQSRKNFDPAG--NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR-CQ 185
G + ++ P G N D R CK P +G S ++ +E C
Sbjct: 434 -----GDENPDIECADC----PIGFYNDPHDPRSCK--PCPCHNGFSCSVMPETEEVVCN 482
Query: 186 -CKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECK 237
C PGVTG +C+ C ++ FGE G C+ C+CN + NCD + G+C +C
Sbjct: 483 NCPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCI 542
Query: 238 DNVEGAQC 245
N G C
Sbjct: 543 HNTAGIYC 550
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 60/234 (25%), Positives = 82/234 (35%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
C+ C G C+ C Y + S C CNC G+ C+ + G C
Sbjct: 382 CI-CPVGYKGQFCQDCASGYKRDSARLGPFGTCIPCNCQGGGA----CDPDTGDCYSGDE 436
Query: 81 VTGDKCDRCDVNHYD--FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
+C C + Y+ CK C C+ S P + V C + G
Sbjct: 437 NPDIECADCPIGFYNDPHDPRSCKPCPCHNGFSCSVMPETEEVV--CNNCPPGVTG-ARC 493
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCD 196
EL DP G +R C+ S + C+ GRC +C G CD
Sbjct: 494 ELCADGYFG-DPFGEH-GPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIHNTAGIYCD 551
Query: 197 RCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C ++ A C++C CNP GS C S G C CK G C
Sbjct: 552 QCKAGYFGDPLAPNPADKCRACNCNPMGS--EPVGCRS-DGTCVCKPGFGGPNC 602
Score = 117 (46.2 bits), Expect = 0.00080, P = 0.00080
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 174 LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVK 231
L+ Q + RC C G C++C Y E C C CN GS+ + CD+
Sbjct: 43 LHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCNSKGSL--SARCDN-S 99
Query: 232 GQCECKDNVEGAQC 245
G+C CK V GA+C
Sbjct: 100 GRCSCKPGVTGARC 113
Score = 78 (32.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNC 59
G C+ C+ G C++CR YY G N CT C C
Sbjct: 153 GRCV-CKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
>RGD|1308889 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005605 "basal lamina"
evidence=ISO;IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0022011 "myelination in peripheral
nervous system" evidence=IEP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEP] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=ISO] [GO:0042383
"sarcolemma" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:1308889 GO:GO:0007411 GO:GO:0030155 GO:GO:0043197
GO:GO:0030198 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 GO:GO:0022011 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 IPI:IPI00361301
PRIDE:F1M614 Ensembl:ENSRNOT00000014917 ArrayExpress:F1M614
Uniprot:F1M614
Length = 3085
Score = 338 (124.0 bits), Expect = 8.9e-29, P = 8.9e-29
Identities = 79/252 (31%), Positives = 117/252 (46%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C + +TG C +C+ + G C++C+ + C CNC
Sbjct: 883 CNVNGSFSEIC------HRKTGQ---C-ECRPNVQGQRCDECKPETFGLQLGRGCIPCNC 932
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+ G+ NC+
Sbjct: 933 NSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCN 987
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
GQC ++ G +E + + G ++ C T GSL+ QCN
Sbjct: 988 PKTGQCICPP-NTIGEKCSECLPNTWGHSIVTGCKV-----CNCSTV-----GSLSSQCN 1036
Query: 180 -SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC-----ECNPAGSVKNTPNCDSVKGQ 233
+ G+C C P +G KC C+ H+++ C + S +C GQ
Sbjct: 1037 INTGQCSCHPKFSGMKCSECNRGHWNYPLCSLCDCFLPGTDATTCDSETRKCSCSDQTGQ 1096
Query: 234 CECKDNVEGAQC 245
C CK NVEG C
Sbjct: 1097 CTCKVNVEGVHC 1108
Score = 319 (117.4 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 84/252 (33%), Positives = 119/252 (47%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKS-GDNFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ Q S C C CN
Sbjct: 779 NNFSPTCHLDRSL------GLICDECPVGYTGPRCERCAEGYFGQPSIPGGSCQPCLCND 832
Query: 62 IGSLNL--QCNS-EGRCQ-CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVK 113
++ C+S G C CKPG TG C+ C + Y FG+A C+ C CN GS
Sbjct: 833 NLDFSIPGSCDSLSGSCLICKPGTTGRFCELC-ADGY-FGDAVDAKNCQPCRCNVNGSFS 890
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
C GQCE + + +G+ E + ++ F R C +++ GS
Sbjct: 891 EI--CHRKTGQCE-CRPNVQGQRCDECKPET---FGLQLGR--GCIPCNCNSF-----GS 937
Query: 174 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
+ C + G+C C+PGV G KCDRC +++F E GC +C+C+ G+ NC+ GQ
Sbjct: 938 KSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCNPKTGQ 992
Query: 234 CECKDNVEGAQC 245
C C N G +C
Sbjct: 993 CICPPNTIGEKC 1004
Score = 253 (94.1 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 74/254 (29%), Positives = 111/254 (43%)
Query: 9 RCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC--N-PI 62
+CF E N G CL C+ GP C +C +Y + C C C N P
Sbjct: 721 QCFGHAEACNDVT--GECLSCKDHTGGPYCNECLPGFYGDPTRGTSEDCQPCACPLNIPS 778
Query: 63 GSLNLQCN---SEGR-C-QCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKN 114
+ + C+ S G C +C G TG +C+RC ++ C+ C CN
Sbjct: 779 NNFSPTCHLDRSLGLICDECPVGYTGPRCERCAEGYFGQPSIPGGSCQPCLCNDNLDFSI 838
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
+CDS+ G C + + GR EL F G+ + D + C+ + GS
Sbjct: 839 PGSCDSLSGSCLICKPGTTGRF-CELCADGY--F---GDAV-DAKNCQPCRCNVN--GSF 889
Query: 175 NLQCNSE-GRCQCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVK 231
+ C+ + G+C+C+P V G +CD C + G GC C CN GS + +C++
Sbjct: 890 SEICHRKTGQCECRPNVQGQRCDECKPETFGLQLGR-GCIPCNCNSFGS--KSFDCEA-S 945
Query: 232 GQCECKDNVEGAQC 245
GQC C+ V G +C
Sbjct: 946 GQCWCQPGVAGKKC 959
Score = 243 (90.6 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 75/241 (31%), Positives = 103/241 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F D E G C CQ G C++C Y+ Q+ G CTAC+
Sbjct: 930 CNCNSFGSKSF-DCEA------SGQCW-CQPGVAGKKCDRCAHGYFNFQEGG---CTACD 978
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ CN + G+C C P G+KC C N + GCK C C+ GS+ +
Sbjct: 979 CSHLGN---NCNPKTGQCICPPNTIGEKCSECLPNTWGHSIVTGCKVCNCSTVGSLSS-- 1033
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
C+ GQC S G +E + N+ P + + D D +
Sbjct: 1034 QCNINTGQC-SCHPKFSGMKCSECN-RGHWNY-PLCS-LCDCFLPGTDATTCD-SETRKC 1088
Query: 177 QCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVK 231
C+ + G+C CK V G CDRC + EA GC SC C T C K
Sbjct: 1089 SCSDQTGQCTCKVNVEGVHCDRCRPGKFGL-EAKNPLGCSSCYCFGV-----TSQCSEAK 1142
Query: 232 G 232
G
Sbjct: 1143 G 1143
Score = 203 (76.5 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 47/140 (33%), Positives = 68/140 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRT------GH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + +R G GG C++C + G NCE C D +++ G
Sbjct: 307 CNCHGKAEECYYDETVASRNLSLNIHGKYIGGGVCINCTHNTAGINCETCIDGFFRPKGV 366
Query: 51 -DNF---CTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
++ C C+C+P GSL+ C + G C CKPG G CDRC V Y
Sbjct: 367 SPSYPRPCQPCHCDPAGSLSEVCIKDEKHTRRGLKPGSCYCKPGFGGMNCDRC-VRGYR- 424
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G C+ C C+ GS P
Sbjct: 425 GYPDCQPCNCSGLGSTNQDP 444
Score = 191 (72.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 72/239 (30%), Positives = 92/239 (38%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNS-EGRC-QCKPGVTG 83
C G +CE C + + +G F C C C G CN G C CK G
Sbjct: 689 CPPGYSGSSCEACWPRHRRVNGTIFGGLCEPCQC--FGHAEA-CNDVTGECLSCKDHTGG 745
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNC--DSVKGQ-CESAQLSSRG 134
C+ C Y G C+ C C P N +P C D G C+ + G
Sbjct: 746 PYCNECLPGFYGDPTRGTSEDCQPCAC-PLNIPSNNFSPTCHLDRSLGLICDECPVGYTG 804
Query: 135 -RVHTELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLGHGGSLNLQCNS-EGRCQ-CKPGV 190
R + P G+ + C D GS C+S G C CKPG
Sbjct: 805 PRCERCAEGYFGQPSIPGGS----CQPCLCNDNLDFSIPGS----CDSLSGSCLICKPGT 856
Query: 191 TGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
TG C+ C + Y FG+A C+ C CN GS C GQCEC+ NV+G +C
Sbjct: 857 TGRFCELC-ADGY-FGDAVDAKNCQPCRCNVNGSFSEI--CHRKTGQCECRPNVQGQRC 911
Score = 174 (66.3 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 60/212 (28%), Positives = 87/212 (41%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGD----------NFCTACNCNPIGSLNLQCNSEGR-CQ 76
DC G +CE C +Y+ + C C C+ S QC+ E CQ
Sbjct: 1344 DCPPGYSGLSCETCAPGFYRVHSEPGGRTPGPTLGTCVPCQCHGHSS---QCDPETSVCQ 1400
Query: 77 -CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKN--TPNC--DSVKG-QCES 127
C+ GD C+RC + +Y C+ C C P S N +P+C + ++ +C +
Sbjct: 1401 NCQHHTAGDFCERCALGYYGIVRGLPNDCQPCAC-PLISPSNNFSPSCVLEGLEDYRCTA 1459
Query: 128 AQLSSRGRVHTELRV-QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQ 185
G+ + P G+ + C+ D Y GSL + C+ G C
Sbjct: 1460 CPRGYEGQYCERCAPGYAGSPSSPGGS----CQECECDPY-----GSLPVPCDPVTGLCT 1510
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSC--EC 215
C+PG TG KCD C+ H G A C C EC
Sbjct: 1511 CRPGATGRKCDGCEHGHAREG-AECVFCGDEC 1541
Score = 158 (60.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 47/148 (31%), Positives = 65/148 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACN 58
C C+G S++C D E C +CQ G CE+C YY + N C C
Sbjct: 1383 CQCHGHSSQC--DPET-------SVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCA 1433
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C +P + + C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1434 CPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYAGSPSSPGGSCQECECD 1493
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGR 135
P GS+ P CD V G C + + + GR
Sbjct: 1494 PYGSLP-VP-CDPVTGLC-TCRPGATGR 1518
Score = 150 (57.9 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 52/188 (27%), Positives = 72/188 (38%)
Query: 75 CQCKPGVTGDKCDRC-----DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
CQC PG +G C+ C VN FG C+ C+C + C+ V G+C S +
Sbjct: 687 CQCPPGYSGSSCEACWPRHRRVNGTIFGGL-CEPCQC-----FGHAEACNDVTGECLSCK 740
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC-------KRDTYPLGH-GGSLNLQCNSE 181
+ G E DP D + C + P H SL L C+
Sbjct: 741 DHTGGPYCNECLPGFYG--DPTRGTSEDCQPCACPLNIPSNNFSPTCHLDRSLGLICD-- 796
Query: 182 GRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-CK 237
+C G TG +C+RC ++ C+ C CN +CDS+ G C CK
Sbjct: 797 ---ECPVGYTGPRCERCAEGYFGQPSIPGGSCQPCLCNDNLDFSIPGSCDSLSGSCLICK 853
Query: 238 DNVEGAQC 245
G C
Sbjct: 854 PGTTGRFC 861
Score = 145 (56.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 50/187 (26%), Positives = 71/187 (37%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSC-----ECNPAGSVKNTPNCDSVKGQCES 127
RC C PG +G C+ C Y E G ++ C P ++ CD C++
Sbjct: 1342 RCDCPPGYSGLSCETCAPGFYRVHSEPGGRTPGPTLGTCVPCQCHGHSSQCDPETSVCQN 1401
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL-GHGGSLNLQCNSEG---- 182
Q + G + N D + C PL + + C EG
Sbjct: 1402 CQHHTAGDFCERCALGYYGIVRGLPN---DCQPC---ACPLISPSNNFSPSCVLEGLEDY 1455
Query: 183 RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
RC C G G C+RC + + C+ CEC+P GS+ P CD V G C C+
Sbjct: 1456 RCTACPRGYEGQYCERCAPGYAGSPSSPGGSCQECECDPYGSLP-VP-CDPVTGLCTCRP 1513
Query: 239 NVEGAQC 245
G +C
Sbjct: 1514 GATGRKC 1520
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 30/64 (46%), Positives = 33/64 (51%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG G CDRC V Y G C+ C C+ GS P C G C CK+NVE
Sbjct: 403 GSCYCKPGFGGMNCDRC-VRGYR-GYPDCQPCNCSGLGSTNQDP-CI---GPCSCKENVE 456
Query: 242 GAQC 245
G C
Sbjct: 457 GEDC 460
Score = 45 (20.9 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQG 31
C C+G S+RC Y HG + D G
Sbjct: 481 CFCSGVSDRCQSSYWTYGNIQDMHGWYLTDLSG 513
>UNIPROTKB|F1MMT2 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0030155 GO:GO:0007155 GO:GO:0042383
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:DAAA02026607 EMBL:DAAA02026593 EMBL:DAAA02026594
EMBL:DAAA02026595 EMBL:DAAA02026596 EMBL:DAAA02026597
EMBL:DAAA02026598 EMBL:DAAA02026599 EMBL:DAAA02026600
EMBL:DAAA02026601 EMBL:DAAA02026602 EMBL:DAAA02026603
EMBL:DAAA02026604 EMBL:DAAA02026605 EMBL:DAAA02026606
IPI:IPI00924129 Ensembl:ENSBTAT00000061257 Uniprot:F1MMT2
Length = 3085
Score = 337 (123.7 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 73/230 (31%), Positives = 114/230 (49%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C +C+ + G C++C+ + C CNCN GS + C G+C C+PGVTG
Sbjct: 898 GQC-ECKPNVQGRRCDECKPETFGLQSARGCIPCNCNSFGSKSFDCEESGQCWCQPGVTG 956
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
KCDRC +++F E GC +C+C+ G+ NCD G+C + + +
Sbjct: 957 KKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCDPKTGRC----ICPPNTIGEKCSKC 1007
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNH 202
+ + + G+ I CK GSL+ QC+ + G+C+C P +G KC C H
Sbjct: 1008 APRTW---GHSI--TTGCKACN--CSSVGSLDFQCDLNMGQCKCHPKFSGAKCTECTRGH 1060
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSVK-------GQCECKDNVEGAQC 245
+++ C C+C +G+ +T + ++ K GQC CK NVEG C
Sbjct: 1061 WNYPH--CSPCDCFLSGTDDSTCDLETKKCSCIDQTGQCTCKVNVEGIHC 1108
Score = 331 (121.6 bits), Expect = 4.9e-28, P = 4.9e-28
Identities = 85/252 (33%), Positives = 119/252 (47%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKS-GDNFCTACNCNP 61
N FS C D+ L G C +C G CE+C + Y+ Q S C C CN
Sbjct: 779 NNFSPTCHMDRSL------GLICDECPVGYSGQRCERCAEGYFGQPSVPGGSCQPCQCND 832
Query: 62 IGSLNL--QCNS-EGRCQ-CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVK 113
++ C+S G C CKPG TG C+ C + Y FG+A C+ C CN GS
Sbjct: 833 NLDFSIPGSCDSLSGSCLICKPGTTGRYCELC-ADGY-FGDAVDAKNCQPCHCNANGSFS 890
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
C + GQCE + + +GR E + ++ A I C +++ GS
Sbjct: 891 EV--CHAQTGQCE-CKPNVQGRRCDECKPETF-GLQSARGCI----PCNCNSF-----GS 937
Query: 174 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
+ C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+ NCD G+
Sbjct: 938 KSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCDPKTGR 992
Query: 234 CECKDNVEGAQC 245
C C N G +C
Sbjct: 993 CICPPNTIGEKC 1004
Score = 288 (106.4 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 76/255 (29%), Positives = 118/255 (46%)
Query: 9 RCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC---NPI 62
+CF E + T G CL+C+ DGP C+KC +Y K + C C C +P
Sbjct: 721 QCFGHAESCDDTT--GECLNCKDHTDGPYCDKCLPGFYGDPTKGTSDDCQPCACPLNSPS 778
Query: 63 GSLNLQCNSEGR----C-QCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSV 112
+ + C+ + C +C G +G +C+RC + FG+ C+ C+CN
Sbjct: 779 NNFSPTCHMDRSLGLICDECPVGYSGQRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDF 836
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
+CDS+ G C + + GR + EL F G+ + D + C+ G
Sbjct: 837 SIPGSCDSLSGSCLICKPGTTGR-YCELCADGY--F---GDAV-DAKNCQ--PCHCNANG 887
Query: 173 SLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSV 230
S + C+++ G+C+CKP V G +CD C + A GC C CN GS + +C+
Sbjct: 888 SFSEVCHAQTGQCECKPNVQGRRCDECKPETFGLQSARGCIPCNCNSFGS--KSFDCEE- 944
Query: 231 KGQCECKDNVEGAQC 245
GQC C+ V G +C
Sbjct: 945 SGQCWCQPGVTGKKC 959
Score = 252 (93.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 77/241 (31%), Positives = 102/241 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F D E G C CQ G C++C Y+ Q+ G CTAC+
Sbjct: 930 CNCNSFGSKSF-DCE------ESGQCW-CQPGVTGKKCDRCAHGYFNFQEGG---CTACD 978
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + GRC C P G+KC +C + GCK+C C+ GS+
Sbjct: 979 CSHLGN---NCDPKTGRCICPPNTIGEKCSKCAPRTWGHSITTGCKACNCSSVGSLDF-- 1033
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
CD GQC+ S G TE + N+ L T L +
Sbjct: 1034 QCDLNMGQCKCHPKFS-GAKCTEC-TRGHWNYPHCSPCDCFLSGTDDSTCDLE---TKKC 1088
Query: 177 QC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVK 231
C + G+C CK V G CDRC + EA GC SC C A T C K
Sbjct: 1089 SCIDQTGQCTCKVNVEGIHCDRCRPGKFGL-EAKNPLGCNSCYCFGA-----TTQCSEAK 1142
Query: 232 G 232
G
Sbjct: 1143 G 1143
Score = 245 (91.3 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 47/126 (37%), Positives = 67/126 (53%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CN NG FS C + +TG C +C+ + G C++C+ + C CNC
Sbjct: 883 CNANGSFSEVC------HAQTGQ---C-ECKPNVQGRRCDECKPETFGLQSARGCIPCNC 932
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
N GS + C G+C C+PGVTG KCDRC +++F E GC +C+C+ G+ NCD
Sbjct: 933 NSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSHLGN-----NCD 987
Query: 120 SVKGQC 125
G+C
Sbjct: 988 PKTGRC 993
Score = 227 (85.0 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 50/140 (35%), Positives = 68/140 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTG----HG-----GHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + R HG G C++C + G NCE C D +++ G
Sbjct: 307 CNCHGKAEECYYDENVARRNRSLNIHGKYIGGGVCINCTRNTAGINCETCIDGFFRPKGV 366
Query: 51 -DNF---CTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+P+GSLN C + G C CKPG G CDRC Y
Sbjct: 367 SPNYPRPCQPCHCDPVGSLNEVCVKDEKHARRGLAPGSCHCKPGFRGVSCDRC-ARGY-I 424
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G CK C C+ AGS P
Sbjct: 425 GYPDCKPCNCSGAGSTNEDP 444
Score = 214 (80.4 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 73/238 (30%), Positives = 96/238 (40%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC-QCKPGVTGD 84
C G +CE C + + +G F C C C G ++ G C CK G
Sbjct: 689 CPPGYTGSSCESCWPRHRRVNGTIFGGLCEPCQC--FGHAESCDDTTGECLNCKDHTDGP 746
Query: 85 KCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNC--DSVKGQ-CESAQLSSRG- 134
CD+C Y G C+ C C P S N +P C D G C+ + G
Sbjct: 747 YCDKCLPGFYGDPTKGTSDDCQPCAC-PLNSPSNNFSPTCHMDRSLGLICDECPVGYSGQ 805
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLGHGGSLNLQCNS-EGRCQ-CKPGVT 191
R + P G+ + C+ D GS C+S G C CKPG T
Sbjct: 806 RCERCAEGYFGQPSVPGGS----CQPCQCNDNLDFSIPGS----CDSLSGSCLICKPGTT 857
Query: 192 GDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+ C + Y FG+A C+ C CN GS C + GQCECK NV+G +C
Sbjct: 858 GRYCELC-ADGY-FGDAVDAKNCQPCHCNANGSFSEV--CHAQTGQCECKPNVQGRRC 911
Score = 171 (65.3 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 59/212 (27%), Positives = 87/212 (41%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGD----------NFCTACNCNPIGSLNLQCNSEGR-CQ 76
DC G +CE C +Y+ + C C C+ G NL C+ E CQ
Sbjct: 1344 DCPPGYSGLSCETCTPGFYRLRSEPGGRTPGATLGTCVPCQCH--GHSNL-CDPETSICQ 1400
Query: 77 -CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKN-TPNCDSVKG----QCES 127
C+ GD C+RC + +Y + C+ C C S N +P+C ++G +C +
Sbjct: 1401 NCQHHTAGDFCERCALGYYGIVKGLPNDCQQCACPLISSSNNFSPSC-IMEGLDDYRCTA 1459
Query: 128 AQLSSRGRVHTELRV-QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQ 185
G+ + P G+ + C+ D + GSL + C+ G C
Sbjct: 1460 CPRGYEGKYCERCAPGYAGSPSSPGGS----CQECECDPH-----GSLPVPCDPVMGICT 1510
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSC--EC 215
C+PG TG KCD C+ H G C C EC
Sbjct: 1511 CRPGATGPKCDGCEQGHAREGME-CVFCGDEC 1541
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 57/220 (25%), Positives = 89/220 (40%)
Query: 43 DNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC-----DVNHYDFG 97
D ++ S N +A +P GS + CQC PG TG C+ C VN FG
Sbjct: 658 DAIFRLSSVNLESAVPISPDGSF---ATAVEVCQCPPGYTGSSCESCWPRHRRVNGTIFG 714
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
C+ C+C + +CD G+C + + + G + + + DP D
Sbjct: 715 GL-CEPCQC-----FGHAESCDDTTGECLNCKDHTDGP-YCDKCLPGFYG-DPTKGTSDD 766
Query: 158 LRRCKRDTYPLGH-GGSLNLQCNSEGR----C-QCKPGVTGDKCDRCDVNHYDFGE---- 207
+ C PL + + C+ + C +C G +G +C+RC + FG+
Sbjct: 767 CQPC---ACPLNSPSNNFSPTCHMDRSLGLICDECPVGYSGQRCERCAEGY--FGQPSVP 821
Query: 208 -AGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEGAQC 245
C+ C+CN +CDS+ G C CK G C
Sbjct: 822 GGSCQPCQCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYC 861
Score = 160 (61.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 49/138 (35%), Positives = 58/138 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACN 58
C C+G SN C D E C +CQ G CE+C YY K N C C
Sbjct: 1383 CQCHGHSNLC--DPET-------SICQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCA 1433
Query: 59 CNPIGSLNL---QCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C I S N C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1434 CPLISSSNNFSPSCIMEGLDDYRCTACPRGYEGKYCERCAPGYAGSPSSPGGSCQECECD 1493
Query: 108 PAGSVKNTPNCDSVKGQC 125
P GS+ P CD V G C
Sbjct: 1494 PHGSLP-VP-CDPVMGIC 1509
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/64 (48%), Positives = 33/64 (51%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG G CDRC Y G CK C C+ AGS P C G C CK+NVE
Sbjct: 403 GSCHCKPGFRGVSCDRC-ARGY-IGYPDCKPCNCSGAGSTNEDP-CF---GPCNCKENVE 456
Query: 242 GAQC 245
G C
Sbjct: 457 GGDC 460
Score = 143 (55.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 49/187 (26%), Positives = 72/187 (38%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSC-----ECNPAGSVKNTPNCDSVKGQCES 127
+C C PG +G C+ C Y E G ++ C P ++ CD C++
Sbjct: 1342 KCDCPPGYSGLSCETCTPGFYRLRSEPGGRTPGATLGTCVPCQCHGHSNLCDPETSICQN 1401
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL-GHGGSLNLQCNSEG---- 182
Q + G + N D ++C PL + + C EG
Sbjct: 1402 CQHHTAGDFCERCALGYYGIVKGLPN---DCQQC---ACPLISSSNNFSPSCIMEGLDDY 1455
Query: 183 RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
RC C G G C+RC + + C+ CEC+P GS+ P CD V G C C+
Sbjct: 1456 RCTACPRGYEGKYCERCAPGYAGSPSSPGGSCQECECDPHGSLP-VP-CDPVMGICTCRP 1513
Query: 239 NVEGAQC 245
G +C
Sbjct: 1514 GATGPKC 1520
Score = 68 (29.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
CNC+G + N G C +C+ + +G +C +C+ ++ DN C C
Sbjct: 432 CNCSGAGST--------NEDPCFGPC-NCKENVEGGDCSRCKFGFFNLQEDNHKGCDECF 482
Query: 59 CNPIGSLNLQCNS 71
C+ + + +C S
Sbjct: 483 CSGVSN---RCQS 492
Score = 36 (17.7 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 234 CECKDNVEGAQCRS 247
C+C G+ C S
Sbjct: 687 CQCPPGYTGSSCES 700
>UNIPROTKB|F1PFM5 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050873 "brown fat cell differentiation"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005610 GeneTree:ENSGT00620000087753 OMA:RSQMEED
EMBL:AAEX03005067 EMBL:AAEX03005068 Ensembl:ENSCAFT00000018923
Uniprot:F1PFM5
Length = 1171
Score = 330 (121.2 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 80/263 (30%), Positives = 126/263 (47%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSG---DNF 53
C+CNG S C FD ++ ++ HGG C +C+ +G NCE+C+ +Y++ + G
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPIQET 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ + C+ G+C CK V G++CD C A GC C+CN
Sbjct: 376 CIPCECDPDGAVPGVPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNI 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
GS ++ P CD GQC L V + + ++ A R C D +
Sbjct: 436 LGSRRDLP-CDEETGQC----LCLPHVVGPKCDQCAPYHWKLASGR--GCEPCACDPH-- 486
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCD-----RCDVNHYDFGEAGCKSCECNPAGSVK 222
+L+ QCN G+C C+ G G C+ +C Y +GC++C+C+ G+
Sbjct: 487 ---NALSPQCNQFTGQCPCREGFGGLTCNAAALRQCPDRTYGDAGSGCRACDCDFRGT-- 541
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
P CD G+C C+ + G +C
Sbjct: 542 EGPGCDKASGRCLCRPGLTGPRC 564
Score = 265 (98.3 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 75/248 (30%), Positives = 109/248 (43%)
Query: 26 CLDCQGDRDGPNCEKCRDNY----YQKSGD---NFCTACNCN---------PIGSLNLQC 69
C+ CQ + GPNCE+C Y ++ + D + C C+CN P Q
Sbjct: 279 CV-CQHNTAGPNCERCAPFYNNQPWRPADDQDPHECQRCDCNGHSETCHFDPAVFAASQG 337
Query: 70 NSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVK 122
G C C+ G C+RC ++++ G C CEC+P G+V P CD V
Sbjct: 338 AHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPIQETCIPCECDPDGAVPGVP-CDPVT 396
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
GQC + V E + F G + + C R D LG +L C+ E
Sbjct: 397 GQCVCKE-----HVQGERCDLCKPGF--TGLTYANPQGCHRCDCNILG--SRRDLPCDEE 447
Query: 182 -GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C C P V G KCD+C H+ GC+ C C+P ++ +P C+ GQC C++
Sbjct: 448 TGQCLCLPHVVGPKCDQCAPYHWKLASGRGCEPCACDPHNAL--SPQCNQFTGQCPCREG 505
Query: 240 VEGAQCRS 247
G C +
Sbjct: 506 FGGLTCNA 513
Score = 240 (89.5 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 60/197 (30%), Positives = 92/197 (46%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSL-NLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C C+CN +GS +L C+ E G+C C P
Sbjct: 397 GQCV-CKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDLPCDEETGQCLCLP 455
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQ-LSSRGRVH 137
V G KCD+C H+ GC+ C C+P ++ +P C+ GQC +
Sbjct: 456 HVVGPKCDQCAPYHWKLASGRGCEPCACDPHNAL--SPQCNQFTGQCPCREGFGGLTCNA 513
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCD 196
LR + + AG+ R C D G+ C+ + GRC C+PG+TG +CD
Sbjct: 514 AALRQCPDRTYGDAGS---GCRACDCD-----FRGTEGPGCDKASGRCLCRPGLTGPRCD 565
Query: 197 RCDVNHYDFGEAGCKSC 213
+C + D C +C
Sbjct: 566 QCQRGYCDRYPV-CVAC 581
>UNIPROTKB|Q16787 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008544 "epidermis
development" evidence=TAS] [GO:0005198 "structural molecule
activity" evidence=NAS] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0031581 "hemidesmosome assembly" evidence=TAS] [GO:0034329
"cell junction assembly" evidence=TAS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0030155 GO:GO:0005198
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
Reactome:REACT_111155 Pathway_Interaction_DB:syndecan_4_pathway
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0008544 GO:GO:0005604 DrugBank:DB00009 DrugBank:DB00029
DrugBank:DB00031 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0031581 DrugBank:DB00015 GO:GO:0045995 Orphanet:79402
eggNOG:NOG292643 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:L34155 EMBL:AY327115 EMBL:AY327116 EMBL:AB107369 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 EMBL:X85107 EMBL:X85108 EMBL:X84900
IPI:IPI00377045 IPI:IPI00743994 IPI:IPI00790908 PIR:A55347
RefSeq:NP_000218.2 RefSeq:NP_001121189.1 RefSeq:NP_937762.1
UniGene:Hs.436367 ProteinModelPortal:Q16787 SMR:Q16787
IntAct:Q16787 MINT:MINT-1431248 STRING:Q16787 PhosphoSite:Q16787
DMDM:215274012 PaxDb:Q16787 PRIDE:Q16787 DNASU:3909
Ensembl:ENST00000313654 Ensembl:ENST00000399516 GeneID:3909
KEGG:hsa:3909 UCSC:uc002kuq.3 CTD:3909 GeneCards:GC18P021269
HGNC:HGNC:6483 HPA:CAB010757 HPA:HPA009309 MIM:226700 MIM:245660
MIM:600805 neXtProt:NX_Q16787 Orphanet:79404 Orphanet:2407
PharmGKB:PA30272 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
OMA:DSCQGCS OrthoDB:EOG4FBHS0 ChiTaRS:LAMA3 GenomeRNAi:3909
NextBio:15345 PMAP-CutDB:Q6VU68 ArrayExpress:Q16787 Bgee:Q16787
CleanEx:HS_LAMA3 Genevestigator:Q16787 GermOnline:ENSG00000053747
GO:GO:0005610 Uniprot:Q16787
Length = 3333
Score = 335 (123.0 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 86/268 (32%), Positives = 127/268 (47%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTG---HGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G ++ C++D ++ N G GG C++CQ + G NCE+C YY+ G
Sbjct: 356 CNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGV 415
Query: 51 --D--NFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
D + C C+C+P + + S GRC CKP GD C++C + +Y+F C
Sbjct: 416 PVDAPDGCIPCSCDPEHADGCEQGS-GRCHCKPNFHGDNCEKCAIGYYNF-----PFCLR 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA--GNRIWDLRRCKRD 164
P V + D V G + + G + R P G R D R
Sbjct: 470 IPIFPVSTPSSEDPVAGDIKGCDCNLEGVLPEICDAHGRCLCRPGVEGPRC-DTCRSGFY 528
Query: 165 TYPLGHG------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
++P+ GS + C+S G+C+C+PGVTG +CDRC YDF S C+P
Sbjct: 529 SFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSACDP 588
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AG++ +S G C+CK +VEG C
Sbjct: 589 AGTI------NSNLGYCQCKLHVEGPTC 610
Score = 317 (116.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 71/228 (31%), Positives = 111/228 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS + C+S G+C+C+PGVT
Sbjct: 507 GRCL-CRPGVEGPRCDTCRSGFYSFP---ICQACWCSALGSYQMPCSSVTGQCECRPGVT 562
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ + K E S ++ L
Sbjct: 563 GQRCDRCLSGAYDFPHCQGSSSACDPAGTINSNLGYCQCKLHVEGPTCSRCKLLYWNL-- 620
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
++N P+G CK + G +C +G C CK V GD CD C+
Sbjct: 621 -DKEN--PSG-----CSECK--CHKAGTVSGTG-ECRQGDGDCHCKSHVGGDSCDTCEDG 669
Query: 202 HYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
++ ++ GC+ C+C+ G++ + C G C+C+++V G C+
Sbjct: 670 YFALEKSNYFGCQGCQCDIGGALSSM--CSGPSGVCQCREHVVGKVCQ 715
Score = 295 (108.9 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 82/258 (31%), Positives = 114/258 (44%)
Query: 10 CFFDKELYNRTGHG-GHCLDCQGDRDGPNCEKCRDNYYQ---------------KSGDNF 53
C D E + G G C C+ + G NCEKC YY S D
Sbjct: 426 CSCDPEHADGCEQGSGRC-HCKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPV 484
Query: 54 C---TACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
C+CN G L C++ GRC C+PGV G +CD C Y F C++C C+ G
Sbjct: 485 AGDIKGCDCNLEGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSFPI--CQACWCSALG 542
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
S + P C SV GQCE R V + + D + +D C+ +
Sbjct: 543 SYQ-MP-CSSVTGQCEC-----RPGV-------TGQRCDRCLSGAYDFPHCQGSSSACDP 588
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNC 227
G++N ++ G CQCK V G C RC + +++ + +GC C+C+ AG+V T C
Sbjct: 589 AGTIN---SNLGYCQCKLHVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGEC 645
Query: 228 DSVKGQCECKDNVEGAQC 245
G C CK +V G C
Sbjct: 646 RQGDGDCHCKSHVGGDSC 663
Score = 268 (99.4 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 64/191 (33%), Positives = 88/191 (46%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G+ C+ EG +C C+P V G +C RC HY F CK C C
Sbjct: 1266 CECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYGFPR--CKPCSCGRR------ 1317
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
C+ + GQC + R + E+ +F P + C R G +
Sbjct: 1318 -LCEEMTGQCRCPPRTVRPQC--EVCETHSFSFHPMAG--CEGCNCSRR----GTIEAAM 1368
Query: 176 LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
+C+ + G+C+CKP +TG +CDRC Y F E C C CN G+ CD G C
Sbjct: 1369 PECDRDSGQCRCKPRITGRQCDRCASGFYRFPE--CVPCNCNRDGTEPGV--CDPGTGAC 1424
Query: 235 ECKDNVEGAQC 245
CK+NVEG +C
Sbjct: 1425 LCKENVEGTEC 1435
Score = 214 (80.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 46/132 (34%), Positives = 64/132 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SN+C + G G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 1687 CNCNGHSNQC--------QDG-SGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCP 1737
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 1738 HTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 1796
Query: 114 NTPNCDSVKGQC 125
+ C + G C
Sbjct: 1797 S---CHPLTGDC 1805
Score = 189 (71.6 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 51/184 (27%), Positives = 82/184 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C +C+ G C++C Y ++ C+P G++N ++ G CQCK V G
Sbjct: 553 GQC-ECRPGVTGQRCDRCLSGAYDFPHCQGSSSA-CDPAGTIN---SNLGYCQCKLHVEG 607
Query: 84 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
C RC + +++ + +GC C+C+ AG+V T C G C S G +
Sbjct: 608 PTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQGDGDCHCK--SHVGGDSCDT 665
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCD 199
F + + + C+ D GG+L+ C+ G CQC+ V G C R +
Sbjct: 666 CEDGY--FALEKSNYFGCQGCQCDI-----GGALSSMCSGPSGVCQCREHVVGKVCQRPE 718
Query: 200 VNHY 203
N+Y
Sbjct: 719 NNYY 722
Score = 174 (66.3 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 53/182 (29%), Positives = 73/182 (40%)
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C C P GD C C +Y G + C P ++ C G C + Q ++ G
Sbjct: 1654 CACPPAYAGDSCQGCSPGYYR-DHKGLYTGRCVPCNCNGHSNQCQDGSGICVNCQHNTAG 1712
Query: 135 RVHTELRVQSRKNFDPAGNRIW-DLRRCKRDTYPLGHGGSLNLQCNSEG---RCQCKPGV 190
H E R Q + + GN + R C P H S C G RC CK G
Sbjct: 1713 E-HCE-RCQ--EGY--YGNAVHGSCRAC-----PCPHTNSFATGCVVNGGDVRCSCKAGY 1761
Query: 191 TGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNTPNCDSVKGQC---ECKDNVEGA 243
TG +C+RC ++ FG C+ C CN G + + C + G C E KD+
Sbjct: 1762 TGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLGS---CHPLTGDCINQEPKDSSPAE 1817
Query: 244 QC 245
+C
Sbjct: 1818 EC 1819
Score = 169 (64.5 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 36/133 (27%), Positives = 66/133 (49%)
Query: 2 NCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACNC 59
+C G S+ C + + G+ C C+ +GP C +C+ Y+ K + C+ C C
Sbjct: 578 HCQGSSSACDPAGTINSNLGY---C-QCKLHVEGPTCSRCKLLYWNLDKENPSGCSECKC 633
Query: 60 NPIGSLNL--QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVK 113
+ G+++ +C +G C CK V GD CD C+ ++ ++ GC+ C+C+ G++
Sbjct: 634 HKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALS 693
Query: 114 NTPNCDSVKGQCE 126
+ C G C+
Sbjct: 694 SM--CSGPSGVCQ 704
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 52/208 (25%), Positives = 76/208 (36%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTAC--------NCNPIGSLNLQCNS-EG 73
G HC +G C C+ N + CT C C P C G
Sbjct: 1275 GPHC-----SPEGGQCP-CQPNVIGRQ----CTRCATGHYGFPRCKPCSCGRRLCEEMTG 1324
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT-PNCDSVKGQCESAQLS 131
+C+C P +C+ C+ + + F AGC+ C C+ G+++ P CD GQC
Sbjct: 1325 QCRCPPRTVRPQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKP-- 1382
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
R+ R+ D + + C G+ C+ G C CK V
Sbjct: 1383 ---------RITGRQ-CDRCASGFYRFPECVPCN--CNRDGTEPGVCDPGTGACLCKENV 1430
Query: 191 TGDKCDRCDVNHYDFGEA---GCKSCEC 215
G +C+ C + A GC SC C
Sbjct: 1431 EGTECNVCREGSFHLDPANLKGCTSCFC 1458
Score = 148 (57.2 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 67/244 (27%), Positives = 99/244 (40%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-NLQCNSEG--RCQCKPG 80
GH + + RD P R YY + C CN + N+ N E RC+C+
Sbjct: 270 GHLIS-KAQRD-PTVT--RRYYYSIKDISIGGQCVCNGHAEVCNIN-NPEKLFRCECQHH 324
Query: 81 VTGDKCDRC--DVNHYDFGEAGCKS---CE-CNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
G+ CDRC N + A + CE CN G N V+ Q A L+++G
Sbjct: 325 TCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASNCYYDPDVERQ--QASLNTQG 382
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-PLG-----HGGSLNLQCNSE------- 181
++ V + AG + +C + Y P G G + C+ E
Sbjct: 383 -IYAGGGVCINCQHNTAGV---NCEQCAKGYYRPYGVPVDAPDGCIPCSCDPEHADGCEQ 438
Query: 182 --GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT-PNCDSVKGQCECKD 238
GRC CKP GD C++C + +Y+F C P + + P +KG C+C
Sbjct: 439 GSGRCHCKPNFHGDNCEKCAIGYYNF--PFCLRIPIFPVSTPSSEDPVAGDIKG-CDC-- 493
Query: 239 NVEG 242
N+EG
Sbjct: 494 NLEG 497
Score = 121 (47.7 bits), Expect = 0.00087, P = 0.00087
Identities = 30/101 (29%), Positives = 44/101 (43%)
Query: 35 GPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQC-NSEGRC-QCKPGVTGDKCDRC 89
G +C+ C YY+ + C CNCN G N QC + G C C+ G+ C+RC
Sbjct: 1662 GDSCQGCSPGYYRDHKGLYTGRCVPCNCN--GHSN-QCQDGSGICVNCQHNTAGEHCERC 1718
Query: 90 DVNHYDFGEAG-CKSCECNPAGSVKN--TPNCDSVKGQCES 127
+Y G C++C C S N V+ C++
Sbjct: 1719 QEGYYGNAVHGSCRACPCPHTNSFATGCVVNGGDVRCSCKA 1759
Score = 96 (38.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 205 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F G CEC+P G+ P+C GQC C+ NV G QC
Sbjct: 1258 FYHKGALPCECHPTGATG--PHCSPEGGQCPCQPNVIGRQC 1296
Score = 76 (31.8 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSEGRCQCK-PG 80
G CL C+ + +G C CR+ + N CT+C C G +N QC+S + + K
Sbjct: 1422 GACL-CKENVEGTECNVCREGSFHLDPANLKGCTSCFC--FG-VNNQCHSSHKRRTKFVD 1477
Query: 81 VTG---DKCDRCDV 91
+ G + DR D+
Sbjct: 1478 MLGWHLETADRVDI 1491
>UNIPROTKB|E1B7Q3 [details] [associations]
symbol:LAMC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008201 "heparin binding" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] GO:GO:0008201 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610
OMA:DRCLPCN EMBL:DAAA02043571 IPI:IPI00715486
Ensembl:ENSBTAT00000061289 ArrayExpress:E1B7Q3 Uniprot:E1B7Q3
Length = 1193
Score = 329 (120.9 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 60/141 (42%), Positives = 85/141 (60%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ TG+G CL C + G +CE+C++ +Y+ + C CNCN
Sbjct: 28 CDCNGKSRQCIFDQELHRLTGNGFRCLHCSDNTGGIHCERCKEGFYRHRERDRCLPCNCN 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSV 112
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG V
Sbjct: 88 SKGSLSPRCDNTGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDRKLLDSKCDCDPAGIV 147
Query: 113 KNTPNCDSVKGQCESAQLSSR 133
P CD+ + C+ A R
Sbjct: 148 G--P-CDTGRCVCKPAVTGER 165
Score = 188 (71.2 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 63/210 (30%), Positives = 90/210 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPN--CEKCRDNYYQKSGD-NFCTAC 57
CNC G C D + TG DC + P+ CE C +Y D C C
Sbjct: 416 CNCQG-GGAC--DPD----TG------DCYSGDENPDIECEDCPIGFYNDPHDPGSCKPC 462
Query: 58 NCNPIGSLNLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPA 109
C S ++ +E C C G+TG +C+ C ++ FGE G C+ C+C+
Sbjct: 463 PCRNGFSCSVMPETEEVVCNNCPHGITGARCELCADGYFGDPFGEHGPVRPCQPCQCSDN 522
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DP-AGNRIWDLRRCKRDTY 166
NCD + G+C ++ G H + Q + + DP A N R C +
Sbjct: 523 VDPSAPGNCDRLTGRCLKCLHNTTG-AHCD---QCKAGYYGDPLAPNPADKCRACNCN-- 576
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
P+G S ++C S+G C CKPG G CD
Sbjct: 577 PMG---SEPVECRSDGSCVCKPGFDGLNCD 603
Score = 185 (70.2 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 38/82 (46%), Positives = 50/82 (60%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GSL+ +C++ GRC CKPGVTGD+CDRC + +AGC C+C+PAG V
Sbjct: 90 GSLSPRCDNTGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDRKLLDSKCDCDPAGIVG- 148
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
P CD+ G+C CK V G +C
Sbjct: 149 -P-CDT--GRCVCKPAVTGERC 166
Score = 169 (64.5 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 64/234 (27%), Positives = 85/234 (36%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
C+ C G C +C Y + S C CNC G+ C+ + G C
Sbjct: 382 CV-CPVGYKGQFCHECASGYKRDSARLGPFGTCIPCNCQGGGA----CDPDTGDCYSGDE 436
Query: 81 VTGDKCDRCDVNHY-DFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
+C+ C + Y D + G CK C C S P + V C + G
Sbjct: 437 NPDIECEDCPIGFYNDPHDPGSCKPCPCRNGFSCSVMPETEEVV--CNNCPHGITG-ARC 493
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCD 196
EL DP G +R C+ S C+ GRC +C TG CD
Sbjct: 494 ELCADGYFG-DPFGEH-GPVRPCQPCQCSDNVDPSAPGNCDRLTGRCLKCLHNTTGAHCD 551
Query: 197 RCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C +Y A C++C CNP GS C S G C CK +G C
Sbjct: 552 QCKAGYYGDPLAPNPADKCRACNCNPMGS--EPVECRS-DGSCVCKPGFDGLNC 602
Score = 165 (63.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 50/148 (33%), Positives = 64/148 (43%)
Query: 74 RC-QCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
RC C G C+RC Y E C C CN GS+ +P CD+ G+C S +
Sbjct: 52 RCLHCSDNTGGIHCERCKEGFYRHRERDRCLPCNCNSKGSL--SPRCDNT-GRC-SCKPG 107
Query: 132 SRGRVHTELRVQSRKNFDPAG-NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
G + + AG + L K D P G G C++ GRC CKP V
Sbjct: 108 VTGD-RCDRCLPGFHTLTDAGCTQDRKLLDSKCDCDPAGIVGP----CDT-GRCVCKPAV 161
Query: 191 TGDKCDRCDVNHYDF-GE--AGCKSCEC 215
TG++CDRC +Y G GC C C
Sbjct: 162 TGERCDRCRPGYYHLDGRNPEGCTQCFC 189
Score = 155 (59.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 39/117 (33%), Positives = 55/117 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTA---- 56
CNCN + L R + G C C+ G C++C ++ + D CT
Sbjct: 84 CNCNSKGS-------LSPRCDNTGRC-SCKPGVTGDRCDRCLPGFHTLT-DAGCTQDRKL 134
Query: 57 ----CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GE--AGCKSCEC 106
C+C+P G + C++ GRC CKP VTG++CDRC +Y G GC C C
Sbjct: 135 LDSKCDCDPAGIVG-PCDT-GRCVCKPAVTGERCDRCRPGYYHLDGRNPEGCTQCFC 189
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 52/188 (27%), Positives = 74/188 (39%)
Query: 74 RCQCKPGVTGDKCDRCDVNHY-DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
+C C G G C C + D G C C C G+ CD G C S
Sbjct: 381 QCVCPVGYKGQFCHECASGYKRDSARLGPFGTCIPCNCQGGGA------CDPDTGDCYS- 433
Query: 129 QLSSRGRVHTELRVQSRKNFDPAG--NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR-CQ 185
G + ++ + P G N D CK P +G S ++ +E C
Sbjct: 434 -----GDENPDIECEDC----PIGFYNDPHDPGSCK--PCPCRNGFSCSVMPETEEVVCN 482
Query: 186 -CKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECK 237
C G+TG +C+ C ++ FGE G C+ C+C+ NCD + G+C +C
Sbjct: 483 NCPHGITGARCELCADGYFGDPFGEHGPVRPCQPCQCSDNVDPSAPGNCDRLTGRCLKCL 542
Query: 238 DNVEGAQC 245
N GA C
Sbjct: 543 HNTTGAHC 550
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 25/65 (38%), Positives = 31/65 (47%)
Query: 183 RC-QCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
RC C G C+RC Y E C C CN GS+ +P CD+ G+C CK V
Sbjct: 52 RCLHCSDNTGGIHCERCKEGFYRHRERDRCLPCNCNSKGSL--SPRCDNT-GRCSCKPGV 108
Query: 241 EGAQC 245
G +C
Sbjct: 109 TGDRC 113
>MGI|MGI:99912 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007411 "axon guidance" evidence=IGI]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0032224 "positive
regulation of synaptic transmission, cholinergic" evidence=IMP]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99912 GO:GO:0007411 GO:GO:0030155
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 HOGENOM:HOG000293201
HOVERGEN:HBG052298 GO:GO:0005606 eggNOG:COG0419 EMBL:U12147
EMBL:X69869 EMBL:S75315 IPI:IPI00309999 PIR:I49077
UniGene:Mm.256087 PDB:1DYK PDB:1OKQ PDB:1QU0 PDB:2WJS PDBsum:1DYK
PDBsum:1OKQ PDBsum:1QU0 PDBsum:2WJS ProteinModelPortal:Q60675
SMR:Q60675 STRING:Q60675 PhosphoSite:Q60675 PaxDb:Q60675
PRIDE:Q60675 UCSC:uc007esf.1 ChiTaRS:LAMA2 EvolutionaryTrace:Q60675
CleanEx:MM_LAMA2 Genevestigator:Q60675
GermOnline:ENSMUSG00000019899 Uniprot:Q60675
Length = 3106
Score = 331 (121.6 bits), Expect = 4.9e-28, P = 4.9e-28
Identities = 77/251 (30%), Positives = 115/251 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+ NG F ++ + RTG C +C+ + G +C++C+ + C CNCN
Sbjct: 916 CDINGS-----FSEDCHTRTGQ---C-ECRPNVQGRHCDECKPETFGLQLGRGCLPCNCN 966
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
GS + C + G+C C+PGV G KCDRC +++F E GC +C+C+ G+ NCD
Sbjct: 967 SFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHLGN-----NCDP 1021
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN- 179
GQC ++ G +E + + G ++ C T GSL QCN
Sbjct: 1022 KTGQCICPP-NTTGEKCSECLPNTWGHSIVTGCKV-----CNCSTV-----GSLASQCNV 1070
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC-----ECNPAGSVKNTPNCDSVKGQC 234
+ G+C C P +G KC C H+++ C + +C GQC
Sbjct: 1071 NTGQCSCHPKFSGMKCSECSRGHWNYPLCTLCDCFLPGTDATTCDLETRKCSCSDQTGQC 1130
Query: 235 ECKDNVEGAQC 245
CK NVEG C
Sbjct: 1131 SCKVNVEGVHC 1141
Score = 328 (120.5 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 85/252 (33%), Positives = 121/252 (48%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKS-GDNFCTACNCNP 61
N FS C D+ L G C +C GP CE+C + Y+ Q S C C CN
Sbjct: 812 NNFSPTCHLDRSL------GLICDECPIGYTGPRCERCAEGYFGQPSVPGGSCQPCQCND 865
Query: 62 IGSLNL--QCNS-EGRCQ-CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVK 113
++ C+S G C CKPG TG C+ C + Y FG+A C+ C C+ GS
Sbjct: 866 NLDYSIPGSCDSLSGSCLICKPGTTGRYCELC-ADGY-FGDAVNTKNCQPCRCDINGSFS 923
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
+C + GQCE + + +GR E + ++ F R C +++ GS
Sbjct: 924 E--DCHTRTGQCE-CRPNVQGRHCDECKPET---FGLQLGR--GCLPCNCNSF-----GS 970
Query: 174 LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
+ C + G+C C+PGV G KCDRC +++F E GC +C+C+ G+ NCD GQ
Sbjct: 971 KSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHLGN-----NCDPKTGQ 1025
Query: 234 CECKDNVEGAQC 245
C C N G +C
Sbjct: 1026 CICPPNTTGEKC 1037
Score = 261 (96.9 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 73/241 (30%), Positives = 109/241 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC--N-PIGSLNLQCN---SEGR 74
G CL+C+ GP C +C +Y + C C C N P + + C+ S G
Sbjct: 767 GECLNCKDHTGGPYCNECLPGFYGDPTRGSPEDCQPCACPLNIPSNNFSPTCHLDRSLGL 826
Query: 75 -C-QCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C +C G TG +C+RC + FG+ C+ C+CN +CDS+ G C
Sbjct: 827 ICDECPIGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDYSIPGSCDSLSGSCLI 884
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQC 186
+ + GR + EL F A N + + C+ D GS + C++ G+C+C
Sbjct: 885 CKPGTTGR-YCELCADGY--FGDAVNTK-NCQPCRCDI-----NGSFSEDCHTRTGQCEC 935
Query: 187 KPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
+P V G CD C + G GC C CN GS + +C++ GQC C+ V G +
Sbjct: 936 RPNVQGRHCDECKPETFGLQLGR-GCLPCNCNSFGS--KSFDCEA-SGQCWCQPGVAGKK 991
Query: 245 C 245
C
Sbjct: 992 C 992
Score = 237 (88.5 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 74/242 (30%), Positives = 103/242 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN F ++ F D E G C CQ G C++C Y+ Q+ G C AC+
Sbjct: 963 CNCNSFGSKSF-DCEA------SGQCW-CQPGVAGKKCDRCAHGYFNFQEGG---CIACD 1011
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C+ +G+ C+ + G+C C P TG+KC C N + GCK C C+ GS+ +
Sbjct: 1012 CSHLGN---NCDPKTGQCICPPNTTGEKCSECLPNTWGHSIVTGCKVCNCSTVGSLAS-- 1066
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD--LRRCKRDTYPLGHGGSL 174
C+ GQC S G +E SR +++ + D L T L +
Sbjct: 1067 QCNVNTGQC-SCHPKFSGMKCSEC---SRGHWNYPLCTLCDCFLPGTDATTCDLE---TR 1119
Query: 175 NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSV 230
C+ + G+C CK V G CDRC + GC SC C T C
Sbjct: 1120 KCSCSDQTGQCSCKVNVEGVHCDRCRPGKFGLDAKNPLGCSSCYCFGV-----TSQCSEA 1174
Query: 231 KG 232
KG
Sbjct: 1175 KG 1176
Score = 202 (76.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 47/140 (33%), Positives = 67/140 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRT------GH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + +R G GG C++C + G NCE C D +++ G
Sbjct: 340 CNCHGKAEECYYDETVASRNLSLNIHGKYIGGGVCINCTHNTAGINCETCVDGFFRPKGV 399
Query: 51 -DNF---CTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
N+ C C+C+P GSL+ C + G C CK G G CDRC V Y
Sbjct: 400 SPNYPRPCQPCHCDPTGSLSEVCVKDEKYAQRGLKPGSCHCKTGFGGVNCDRC-VRGYH- 457
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G C+ C C+ GS P
Sbjct: 458 GYPDCQPCNCSGLGSTNEDP 477
Score = 182 (69.1 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 69/239 (28%), Positives = 93/239 (38%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNS-EGRC-QCKPGVTG 83
C G +CE C + + +G F C C C C+ G C CK G
Sbjct: 722 CPPGYSGSSCETCWPRHRRVNGTIFGGICEPCQCFAHAEA---CDDITGECLNCKDHTGG 778
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNC--DSVKGQ-CESAQLSSRG 134
C+ C Y G C+ C C P N +P C D G C+ + G
Sbjct: 779 PYCNECLPGFYGDPTRGSPEDCQPCAC-PLNIPSNNFSPTCHLDRSLGLICDECPIGYTG 837
Query: 135 -RVHTELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLGHGGSLNLQCNS-EGRCQ-CKPGV 190
R + P G+ + C+ D GS C+S G C CKPG
Sbjct: 838 PRCERCAEGYFGQPSVPGGS----CQPCQCNDNLDYSIPGS----CDSLSGSCLICKPGT 889
Query: 191 TGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
TG C+ C + Y FG+A C+ C C+ GS +C + GQCEC+ NV+G C
Sbjct: 890 TGRYCELC-ADGY-FGDAVNTKNCQPCRCDINGSFSE--DCHTRTGQCECRPNVQGRHC 944
Score = 176 (67.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 62/211 (29%), Positives = 88/211 (41%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGD----------NFCTACNCNPIGSLNLQCNSEGR-CQ 76
DC G +CE C +Y+ + C C CN S QC+ E CQ
Sbjct: 1377 DCPPGYSGLSCETCAPGFYRLRSEPGGRTPGPTLGTCVPCQCNGHSS---QCDPETSVCQ 1433
Query: 77 -CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKN--TPNC--DSVKG-QCES 127
C+ GD C+RC + +Y C+ C C P S N +P+C + ++ +C +
Sbjct: 1434 NCQHHTAGDFCERCALGYYGIVRGLPNDCQPCAC-PLISPSNNFSPSCVLEGLEDYRCTA 1492
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQC 186
G+ + E R P+ + C+ D Y GSL + C+ G C C
Sbjct: 1493 CPRGYEGQ-YCE-RCAPGYTGSPSSPG-GSCQECECDPY-----GSLPVPCDRVTGLCTC 1544
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSC--EC 215
+PG TG KCD C+ H G A C C EC
Sbjct: 1545 RPGATGRKCDGCEHWHAREG-AECVFCGDEC 1574
Score = 163 (62.4 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 48/148 (32%), Positives = 65/148 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACN 58
C CNG S++C D E C +CQ G CE+C YY + N C C
Sbjct: 1416 CQCNGHSSQC--DPET-------SVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCA 1466
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 107
C +P + + C EG RC C G G C+RC + + C+ CEC+
Sbjct: 1467 CPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECD 1526
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGR 135
P GS+ P CD V G C + + + GR
Sbjct: 1527 PYGSLP-VP-CDRVTGLC-TCRPGATGR 1551
Score = 157 (60.3 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 53/190 (27%), Positives = 75/190 (39%)
Query: 75 CQCKPGVTGDKCDRC-----DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
CQC PG +G C+ C VN FG C+ C+C + CD + G+C + +
Sbjct: 720 CQCPPGYSGSSCETCWPRHRRVNGTIFGGI-CEPCQC-----FAHAEACDDITGECLNCK 773
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC-------KRDTYPLGH-GGSLNLQCNSE 181
+ G E DP D + C + P H SL L C+
Sbjct: 774 DHTGGPYCNECLPGFYG--DPTRGSPEDCQPCACPLNIPSNNFSPTCHLDRSLGLICD-- 829
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE-----AGCKSCECNPAGSVKNTPNCDSVKGQCE- 235
+C G TG +C+RC + FG+ C+ C+CN +CDS+ G C
Sbjct: 830 ---ECPIGYTGPRCERCAEGY--FGQPSVPGGSCQPCQCNDNLDYSIPGSCDSLSGSCLI 884
Query: 236 CKDNVEGAQC 245
CK G C
Sbjct: 885 CKPGTTGRYC 894
Score = 149 (57.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 53/192 (27%), Positives = 71/192 (36%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDF-GEAG----------CKSCECNPAGSVKNTPNCDSVK 122
RC C PG +G C+ C Y E G C C+CN S CD
Sbjct: 1375 RCDCPPGYSGLSCETCAPGFYRLRSEPGGRTPGPTLGTCVPCQCNGHSS-----QCDPET 1429
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL-GHGGSLNLQCNSE 181
C++ Q + G + N D + C PL + + C E
Sbjct: 1430 SVCQNCQHHTAGDFCERCALGYYGIVRGLPN---DCQPC---ACPLISPSNNFSPSCVLE 1483
Query: 182 G----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQ 233
G RC C G G C+RC + + C+ CEC+P GS+ P CD V G
Sbjct: 1484 GLEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLP-VP-CDRVTGL 1541
Query: 234 CECKDNVEGAQC 245
C C+ G +C
Sbjct: 1542 CTCRPGATGRKC 1553
Score = 139 (54.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 29/64 (45%), Positives = 32/64 (50%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CK G G CDRC V Y G C+ C C+ GS P C G C CK+NVE
Sbjct: 436 GSCHCKTGFGGVNCDRC-VRGYH-GYPDCQPCNCSGLGSTNEDP-C---VGPCSCKENVE 489
Query: 242 GAQC 245
G C
Sbjct: 490 GEDC 493
Score = 71 (30.1 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
CNC+G + N G C C+ + +G +C +C+ ++ DN C C
Sbjct: 465 CNCSGLGST--------NEDPCVGPC-SCKENVEGEDCSRCKSGFFNLQEDNQKGCEECF 515
Query: 59 CNPIGSLNLQCNS 71
C+ + + +C S
Sbjct: 516 CSGVSN---RCQS 525
Score = 67 (28.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 71 SEGRCQCKPGVTGDKCDRCDVN-HYDFGEAG-------CKSCECN 107
++ RC+C+ G+ CDRC H AG C++C C+
Sbjct: 299 NKSRCECEHNTCGESCDRCCPGFHQKPWRAGTFLTKSECEACNCH 343
>UNIPROTKB|F1NJ23 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:NTWQLAS EMBL:AADN02036854 EMBL:AADN02036852 EMBL:AADN02036853
IPI:IPI00586930 Ensembl:ENSGALT00000012832 ArrayExpress:F1NJ23
Uniprot:F1NJ23
Length = 1782
Score = 274 (101.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 81/271 (29%), Positives = 118/271 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
C+CNG ++ C + + G CL C+ GPNCE+C YY SGD+ C
Sbjct: 859 CHCNGHADDC---------SPYTGECLHCRDHTAGPNCERCEAGYYGDPILGSGDH-CRP 908
Query: 57 CNCNPIGSLNLQCNSEGR----------CQCKPGVTGDKCDRCDVNHYDF-GEAG--CKS 103
C C P G + + + G C C G G +CD C + E G C+
Sbjct: 909 CPC-PDGPESGRQFASGCYQDPVTLQVVCVCSTGYIGSRCDECASGFFGSPDEVGGACQP 967
Query: 104 CECNPAGSVKNT-PN-CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW-DLRR 160
C+CN ++ +T P CD G C + G + L R+ + G+ + D R+
Sbjct: 968 CQCN--NNIDSTDPEACDKRTGTCVKCLYHTEGE-NCHL---CRQGY--YGSALQQDCRK 1019
Query: 161 CKRD---TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCEC 215
C + T + N +C + G+C+C PGV G CDRC N + GC+ C+C
Sbjct: 1020 CVCNYLGTVREDCDDAENCRCEAATGQCRCLPGVVGQTCDRCAPNTWRLASGTGCEPCDC 1079
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ A S+ C+ GQC C G CR
Sbjct: 1080 DTARSIGLA--CNEFTGQCHCMPGFGGRTCR 1108
Score = 258 (95.9 bits), Expect = 5.0e-28, Sum P(2) = 5.0e-28
Identities = 67/223 (30%), Positives = 102/223 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCNG S +C FD +Y TG+ GG C DCQ + G NCE+C+ Y+Q +
Sbjct: 326 CNCNGHSTQCHFDMAVYMATGNTSGGVCDDCQHNTVGRNCEQCKPFYFQHPERDLRDPDV 385
Query: 54 CTACNCNPIGSLNLQ-CNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C CNC+P GS N C+ G+C+CK V G++CD C Y
Sbjct: 386 CEPCNCDPAGSQNGGVCDRYTDFSTGLIAGQCRCKLFVEGERCDLCKEGFYGLSADDPSG 445
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+ + P + C+S G + + R+ + K + W L
Sbjct: 446 CQSCACNPLGTHPGGNP----CDS----ETGNCYCK-RLVTGKQCNQCLPEHWGLSNDMD 496
Query: 164 DTYPLG--HGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
P GG+L+ C+SE G+C+C+P + G +C++ + +Y
Sbjct: 497 GCRPCDCDQGGALHNNCSSESGQCECRPHMFGRQCNQVEPGYY 539
Score = 252 (93.8 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 65/229 (28%), Positives = 99/229 (43%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP-IGSLNLQ-CNSE-GRC-QCKP 79
C+ C G C++C ++ + C C CN I S + + C+ G C +C
Sbjct: 936 CV-CSTGYIGSRCDECASGFFGSPDEVGGACQPCQCNNNIDSTDPEACDKRTGTCVKCLY 994
Query: 80 GVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKG-QCESAQLSSRGRVH 137
G+ C C +Y + C+ C CN G+V+ +CD + +CE+A + + R
Sbjct: 995 HTEGENCHLCRQGYYGSALQQDCRKCVCNYLGTVRE--DCDDAENCRCEAA--TGQCRCL 1050
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCD 196
+ Q+ P R+ C + S+ L CN G+C C PG G C
Sbjct: 1051 PGVVGQTCDRCAPNTWRLASGTGC--EPCDCDTARSIGLACNEFTGQCHCMPGFGGRTCR 1108
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C + C++C+CNP G TP CD GQC C + VEG +C
Sbjct: 1109 ECQELFWGDPSVECRACDCNPRGI--QTPQCDRATGQCICNEGVEGPRC 1155
Score = 246 (91.7 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 71/227 (31%), Positives = 99/227 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN +N D E ++ G C+ C +G NC CR YY + C C CN
Sbjct: 968 CQCN--NNIDSTDPEACDK--RTGTCVKCLYHTEGENCHLCRQGYYGSALQQDCRKCVCN 1023
Query: 61 PIGSL--------NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAG 110
+G++ N +C + G+C+C PGV G CDRC N + GC+ C+C+ A
Sbjct: 1024 YLGTVREDCDDAENCRCEAATGQCRCLPGVVGQTCDRCAPNTWRLASGTGCEPCDCDTAR 1083
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
S+ C+ GQC GR E Q DP+ + R C D P G
Sbjct: 1084 SIGLA--CNEFTGQCHCMP-GFGGRTCREC--QELFWGDPSV----ECRAC--DCNPRG- 1131
Query: 171 GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC-EC 215
QC+ + G+C C GV G +CD+C + F C C +C
Sbjct: 1132 --IQTPQCDRATGQCICNEGVEGPRCDKCSRGYSGFFP-DCVPCHQC 1175
Score = 224 (83.9 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 69/234 (29%), Positives = 99/234 (42%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
GG C C+ + G C +C + G + C C C+ GS N C++E G+C C PGV
Sbjct: 781 GGQC-QCRPNVVGRQCNRCAPGTFG-FGPSGCRPCECHLRGSYNSFCDAETGQCHCFPGV 838
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CDRC + F C+ C CN G + +C G+C + + G + E R
Sbjct: 839 YGRQCDRCLPGFWGF--PSCQPCHCN--G---HADDCSPYTGECLHCRDHTAGP-NCE-R 889
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYP-LGH---GGSLNLQCNSEGRCQCKPGVTGDKCDR 197
++ DP R C P G G + C C G G +CD
Sbjct: 890 CEAGYYGDPILGSGDHCRPCPCPDGPESGRQFASGCYQDPVTLQVVCVCSTGYIGSRCDE 949
Query: 198 CDVNHYDF-GEAG--CKSCECNPAGSVKNT-PN-CDSVKGQC-ECKDNVEGAQC 245
C + E G C+ C+CN ++ +T P CD G C +C + EG C
Sbjct: 950 CASGFFGSPDEVGGACQPCQCN--NNIDSTDPEACDKRTGTCVKCLYHTEGENC 1001
Score = 222 (83.2 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 74/243 (30%), Positives = 106/243 (43%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDN-FCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTG 83
CLD D E N +K N T C+ + + S G C C+ G
Sbjct: 303 CLDFYHDLPWRPAEGRNSNACKKCNCNGHSTQCHFDMAVYMATGNTSGGVCDDCQHNTVG 362
Query: 84 DKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDS--------VKGQCESAQ 129
C++C ++ E C+ C C+PAGS +N CD + GQC +
Sbjct: 363 RNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGS-QNGGVCDRYTDFSTGLIAGQCR-CK 420
Query: 130 LSSRGRVHTELRVQSRKNF---DPAGNRIWDLRRCKRDTYPLG-HGGSLNLQCNSE-GRC 184
L G +L + DP+G + C + PLG H G N C+SE G C
Sbjct: 421 LFVEGE-RCDLCKEGFYGLSADDPSG-----CQSCACN--PLGTHPGG-N-PCDSETGNC 470
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
CK VTG +C++C H+ GC+ C+C+ G++ N NC S GQCEC+ ++ G
Sbjct: 471 YCKRLVTGKQCNQCLPEHWGLSNDMDGCRPCDCDQGGALHN--NCSSESGQCECRPHMFG 528
Query: 243 AQC 245
QC
Sbjct: 529 RQC 531
Score = 186 (70.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ S G+CQC+P V G +C+RC + FG +GC+ CEC+ GS + CD+
Sbjct: 771 GSLSSVCDPSGGQCQCRPNVVGRQCNRCAPGTFGFGPSGCRPCECHLRGSYNSF--CDAE 828
Query: 231 KGQCECKDNVEGAQC 245
GQC C V G QC
Sbjct: 829 TGQCHCFPGVYGRQC 843
Score = 185 (70.2 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 37/93 (39%), Positives = 54/93 (58%)
Query: 36 PNCEKCRDNYYQKSGDNFCTA--CNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVN 92
P + C++ + S TA C C+P GSL+ C+ S G+CQC+P V G +C+RC
Sbjct: 742 PMTDVCKNIIFSISALLHETALSCQCDPQGSLSSVCDPSGGQCQCRPNVVGRQCNRCAPG 801
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ FG +GC+ CEC+ GS + CD+ GQC
Sbjct: 802 TFGFGPSGCRPCECHLRGSYNSF--CDAETGQC 832
Score = 137 (53.3 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 74/265 (27%), Positives = 103/265 (38%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F +E+ HG HC+ C+ + G NCE+C D Y+ +
Sbjct: 262 CFCYGHASECAPVEGFSEEVEGMV-HG-HCM-CRHNTKGLNCEQCLDFYHDLPWRPAEGR 318
Query: 50 GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT-GDKCDRCDVNHYDFGEAGCKSCEC-- 106
N C CNCN G + QC+ + G T G CD C H G C+ C+
Sbjct: 319 NSNACKKCNCN--GH-STQCHFDMAVYMATGNTSGGVCDDCQ--HNTVGR-NCEQCKPFY 372
Query: 107 --NPAGSVKNTPNCDSVKGQCESAQLSSRGRV---HTELRV-----QSRKNFDPAGNRIW 156
+P +++ C+ C+ A S G V +T+ Q R G R
Sbjct: 373 FQHPERDLRDPDVCEPCN--CDPAG-SQNGGVCDRYTDFSTGLIAGQCRCKLFVEGERC- 428
Query: 157 DLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT---GDKCDRCDVNHYDFGEAGCKSC 213
DL CK Y L C S C C P T G+ CD N Y K C
Sbjct: 429 DL--CKEGFYGLSADDPSG--CQS---CACNPLGTHPGGNPCDSETGNCYCKRLVTGKQC 481
Query: 214 -ECNPAG-SVKNTPNCDSVKGQCEC 236
+C P + N + D + C+C
Sbjct: 482 NQCLPEHWGLSN--DMDGCR-PCDC 503
Score = 101 (40.6 bits), Expect = 5.0e-28, Sum P(2) = 5.0e-28
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
SC+C+P GS+ + CD GQC+C+ NV G QC
Sbjct: 764 SCQCDPQGSLSSV--CDPSGGQCQCRPNVVGRQC 795
Score = 45 (20.9 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF 53
N + G C +C+ G C + YY S D++
Sbjct: 512 NCSSESGQC-ECRPHMFGRQCNQVEPGYYFISLDHY 546
>UNIPROTKB|P07942 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9606 "Homo
sapiens" [GO:0005178 "integrin binding" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0043257
"laminin-8 complex" evidence=IDA;TAS] [GO:0005607 "laminin-2
complex" evidence=IDA;TAS] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0042476 "odontogenesis"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA;TAS]
[GO:0005198 "structural molecule activity" evidence=NAS]
[GO:0005606 "laminin-1 complex" evidence=IDA;TAS;IPI] [GO:0030335
"positive regulation of cell migration" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IDA] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=TAS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS] GO:GO:0048471
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0016477 GO:GO:0070062 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0042476 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
EMBL:CH236947 GO:GO:0050679 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 DrugBank:DB00015 GO:GO:0005201 GO:GO:0043208
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384 HOGENOM:HOG000007552
GO:GO:0005607 GO:GO:0043257 KO:K05636 InterPro:IPR013015
PROSITE:PS51116 EMBL:M61951 EMBL:M58147 EMBL:M61917 EMBL:M61918
EMBL:M61921 EMBL:M61922 EMBL:M61923 EMBL:M61924 EMBL:M61925
EMBL:M61926 EMBL:M61927 EMBL:M61928 EMBL:M61929 EMBL:M61930
EMBL:M61931 EMBL:M61932 EMBL:M61933 EMBL:M61934 EMBL:M61935
EMBL:M61936 EMBL:M61938 EMBL:M61939 EMBL:M61940 EMBL:M61941
EMBL:M61942 EMBL:M61943 EMBL:M61944 EMBL:M61945 EMBL:M61946
EMBL:M61947 EMBL:M61948 EMBL:M61949 EMBL:M61950 EMBL:M55370
EMBL:M55378 EMBL:M55365 EMBL:M55371 EMBL:M55372 EMBL:M55373
EMBL:M55374 EMBL:M55375 EMBL:M55376 EMBL:M55344 EMBL:M55345
EMBL:M55346 EMBL:M55347 EMBL:M55348 EMBL:M55349 EMBL:M55350
EMBL:M55351 EMBL:M55352 EMBL:M55353 EMBL:M55355 EMBL:M55356
EMBL:M55357 EMBL:M55358 EMBL:M55359 EMBL:M55360 EMBL:M55361
EMBL:M55362 EMBL:M55363 EMBL:M55364 EMBL:M55366 EMBL:M55367
EMBL:M55368 EMBL:M55369 EMBL:M61916 EMBL:BC113455 EMBL:M20206
IPI:IPI00013976 PIR:S13547 RefSeq:NP_002282.2 UniGene:Hs.650585
ProteinModelPortal:P07942 SMR:P07942 IntAct:P07942
MINT:MINT-2860329 STRING:P07942 PhosphoSite:P07942 DMDM:126366
PaxDb:P07942 PRIDE:P07942 Ensembl:ENST00000222399 GeneID:3912
KEGG:hsa:3912 UCSC:uc003vev.2 CTD:3912 GeneCards:GC07M107564
H-InvDB:HIX0025323 HGNC:HGNC:6486 HPA:CAB004256 HPA:HPA004056
HPA:HPA004132 MIM:150240 neXtProt:NX_P07942 PharmGKB:PA30275
HOVERGEN:HBG052301 PhylomeDB:P07942 ChiTaRS:LAMB1 GenomeRNAi:3912
NextBio:15367 ArrayExpress:P07942 Bgee:P07942 CleanEx:HS_LAMB1
Genevestigator:P07942 GermOnline:ENSG00000091136 Uniprot:P07942
Length = 1786
Score = 281 (104.0 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 83/269 (30%), Positives = 112/269 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
C CNG ++ C D G CL+CQ G NCE+C YY SGD+ C
Sbjct: 867 CQCNGHADDC--DPVT-------GECLNCQDYTMGHNCERCLAGYYGDPIIGSGDH-CRP 916
Query: 57 CNCNPIG-----SLNLQCNSEG-----RCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKS 103
C C P G C + C C PG G +CD C ++ + E G C+
Sbjct: 917 CPC-PDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGYFGNPSEVGGSCQP 975
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW-DLRRCK 162
C+C+ + CD G+C + G H + F G+ + D R+C
Sbjct: 976 CQCHNNIDTTDPEACDKETGRCLKCLYHTEGE-HCQFC-----RFGYYGDALQQDCRKCV 1029
Query: 163 RDTYPLG----HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECN 216
+ Y LG H + QC+ + G+C C P V G CDRC N + GC C CN
Sbjct: 1030 CN-Y-LGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCN 1087
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
A S P+C+ GQC+C G C
Sbjct: 1088 AAHSFG--PSCNEFTGQCQCMPGFGGRTC 1114
Score = 264 (98.0 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 69/231 (29%), Positives = 98/231 (42%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNC-NPIGSLNLQ-CNSE-GRC-QCKP 79
C+ C G C+ C Y+ + C C C N I + + + C+ E GRC +C
Sbjct: 944 CV-CDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLY 1002
Query: 80 GVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G+ C C +Y D + C+ C CN G+V+ +C+ QC+ A G+
Sbjct: 1003 HTEGEHCQFCRFGYYGDALQQDCRKCVCNYLGTVQE--HCNGSDCQCDKAT----GQCLC 1056
Query: 139 ELRVQSRKNFDPAGNRIWDLRR---CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDK 194
V + N D W L C H S CN G+CQC PG G
Sbjct: 1057 LPNVIGQ-NCDRCAPNTWQLASGTGCDPCNCNAAH--SFGPSCNEFTGQCQCMPGFGGRT 1113
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1114 CSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1162
Score = 263 (97.6 bits), Expect = 8.0e-28, Sum P(2) = 8.0e-28
Identities = 72/225 (32%), Positives = 102/225 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ NF
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 54 CTACNCNPIGSLNLQ-CNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C C+P GS N C+S G+C+CK V G+ CD C YD
Sbjct: 395 CERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFG 454
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW----DLR 159
C+ + P + C+S G + + R+ + ++ D W DL
Sbjct: 455 CKSCACNPLGTIPGGNP----CDS----ETGHCYCK-RLVTGQHCDQCLPEHWGLSNDLD 505
Query: 160 RCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C+ LG G+LN C +E G+C C+P + G +C+ + +Y
Sbjct: 506 GCRPCDCDLG--GALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Score = 252 (93.8 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 69/235 (29%), Positives = 101/235 (42%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
+GG C C+ + G C +C + G + C C C+ GS+N CN G+C C G
Sbjct: 788 NGGQC-QCRPNVVGRTCNRCAPGTFG-FGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQG 845
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
V +CDRC H+ F C+ C+CN G + +CD V G+C + Q + G H
Sbjct: 846 VYARQCDRCLPGHWGF--PSCQPCQCN--G---HADDCDPVTGECLNCQDYTMG--HNCE 896
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG-----RCQCKPGVTGDKC 195
R + DP R C P G C + C C PG G +C
Sbjct: 897 RCLAGYYGDPIIGSGDHCRPCPCPDGP-DSGRQFARSCYQDPVTLQLACVCDPGYIGSRC 955
Query: 196 DRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
D C ++ + E G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 956 DDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQ 1010
Score = 244 (91.0 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 71/226 (31%), Positives = 97/226 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C C+ +N D E ++ G CL C +G +C+ CR YY + C C CN
Sbjct: 976 CQCH--NNIDTTDPEACDK--ETGRCLKCLYHTEGEHCQFCRFGYYGDALQQDCRKCVCN 1031
Query: 61 PIGSLNLQCNSE--------GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGS 111
+G++ CN G+C C P V G CDRC N + GC C CN A S
Sbjct: 1032 YLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAHS 1091
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
P+C+ GQC+ GR +E + + F G+ + R C D P G
Sbjct: 1092 FG--PSCNEFTGQCQCMP-GFGGRTCSECQ----ELF--WGDPDVECRACDCD--PRGIE 1140
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC-EC 215
QC+ S G+C C GV G +CD+C Y C C +C
Sbjct: 1141 TP---QCDQSTGQCVCVEGVEGPRCDKC-TRGYSGVFPDCTPCHQC 1182
Score = 220 (82.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 70/233 (30%), Positives = 105/233 (45%)
Query: 33 RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDV 91
R+ C+KC N + S C+ + L S G C C+ G C++C
Sbjct: 327 RNSNACKKCNCNEHSIS-------CHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKP 379
Query: 92 NHYDFGEAG------CKSCECNPAGSVKNTPNCDS--------VKGQCESAQLSSRGRVH 137
+Y E C+ C C+PAGS +N CDS + GQC +L+ G H
Sbjct: 380 FYYQHPERDIRDPNFCERCTCDPAGS-QNEGICDSYTDFSTGLIAGQCR-CKLNVEGE-H 436
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH--GGSLNLQCNSE-GRCQCKPGVTGDK 194
+ V +D + + + C + PLG GG+ C+SE G C CK VTG
Sbjct: 437 CD--VCKEGFYDLSSEDPFGCKSCACN--PLGTIPGGN---PCDSETGHCYCKRLVTGQH 489
Query: 195 CDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD+C H+ GC+ C+C+ G++ N+ C + GQC C+ ++ G QC
Sbjct: 490 CDQCLPEHWGLSNDLDGCRPCDCDLGGALNNS--CFAESGQCSCRPHMIGRQC 540
Score = 190 (71.9 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 40/97 (41%), Positives = 53/97 (54%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+ FG +GCK CEC+ GSV C+ V GQC Q
Sbjct: 810 TFGFGPSGCKPCECHLQGSVNAF--CNPVTGQCHCFQ 844
Score = 180 (68.4 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG +GCK CEC+ GSV C+ V
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAF--CNPV 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 837 TGQCHCFQGVYARQC 851
Score = 132 (51.5 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 60/223 (26%), Positives = 90/223 (40%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ HG HC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECAPVDGFNEEVEGMV-HG-HCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 327
Query: 50 GDNFCTACNCNPIGSLNLQCNSEGRCQCKPG-VTGDKCDRCDVNHYDFGEAGCKSCEC-- 106
N C CNCN ++ C+ + G V+G CD C H G C+ C+
Sbjct: 328 NSNACKKCNCN---EHSISCHFDMAVYLATGNVSGGVCDDCQ--HNTMGR-NCEQCKPFY 381
Query: 107 --NPAGSVKNTPN-CDSVKGQCESAQLSSRGRV--HTELRV-----QSRKNFDPAGNRIW 156
+P +++ PN C+ + C+ A + G +T+ Q R + G
Sbjct: 382 YQHPERDIRD-PNFCE--RCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHC- 437
Query: 157 DLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT---GDKCD 196
D+ CK Y L C S C C P T G+ CD
Sbjct: 438 DV--CKEGFYDLSSEDPFG--CKS---CACNPLGTIPGGNPCD 473
Score = 94 (38.1 bits), Expect = 8.0e-28, Sum P(2) = 8.0e-28
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CEC+P GS+ + CD GQC+C+ NV G C
Sbjct: 772 ACECDPQGSLSSV--CDPNGGQCQCRPNVVGRTC 803
Score = 43 (20.2 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 204 DFGEAGCKSCECNPAGSVKNT----PNCDSVKGQCEC 236
D A +C P S T PNC + +G+ +C
Sbjct: 1389 DLSAAAEMTCGTPPGASCSETECGGPNCRTDEGERKC 1425
>MGI|MGI:99913 [details] [associations]
symbol:Lamc2 "laminin, gamma 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISO] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005607 "laminin-2 complex" evidence=ISO]
[GO:0005610 "laminin-5 complex" evidence=IDA] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005938 "cell cortex"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] MGI:MGI:99913 GO:GO:0008201 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 HOGENOM:HOG000019301 GO:GO:0005610
eggNOG:NOG285700 HOVERGEN:HBG062127 OrthoDB:EOG4ZCT3N EMBL:U43327
IPI:IPI00117115 UniGene:Mm.329272 ProteinModelPortal:Q61092
SMR:Q61092 STRING:Q61092 PhosphoSite:Q61092 PRIDE:Q61092
UCSC:uc007czr.1 InParanoid:Q61092 PMAP-CutDB:Q61092
CleanEx:MM_LAMC2 Genevestigator:Q61092
GermOnline:ENSMUSG00000026479 Uniprot:Q61092
Length = 1191
Score = 323 (118.8 bits), Expect = 9.9e-28, P = 9.9e-28
Identities = 58/141 (41%), Positives = 85/141 (60%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG G CL+C + G +CE+CR+ +Y+ + C CNC+
Sbjct: 28 CDCNGKSRQCVFDQELHRQTGSGFRCLNCNDNTAGVHCERCREGFYRHRDRDRCLPCNCH 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSV 112
GSL+ C++ G+C+CKPGVTG +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLSAGCDNSGQCRCKPGVTGQRCDRCQPGFHMLTDAGCTRDQGQLDSKCDCDPAGI- 146
Query: 113 KNTPNCDSVKGQCESAQLSSR 133
+ P CDS + C+ A R
Sbjct: 147 -SGP-CDSGRCVCKPAVTGER 165
Score = 187 (70.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 63/210 (30%), Positives = 89/210 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPN--CEKCRDNYYQKSGD-NFCTAC 57
CNC G C D + TG DC + P+ C C +Y D C C
Sbjct: 416 CNCQG-GGAC--DPD----TG------DCYSGDENPDIECADCPIGFYNDPHDPRSCKPC 462
Query: 58 NCNPIGSLNLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPA 109
C+ S ++ +E C C PGVTG +C+ C + FGE G C+ C+CN
Sbjct: 463 PCHNGFSCSVMPETEEVVCNNCPPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNN 522
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DP-AGNRIWDLRRCKRDTY 166
+ NCD + G+C ++ G V+ + Q + + DP A N R C +
Sbjct: 523 VDPNASGNCDQLTGRCLKCIYNTAG-VYCD---QCKAGYFGDPLAPNPADKCRAC--NCS 576
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
P+G +C +G C CKPG G CD
Sbjct: 577 PMGSEPG---ECRGDGSCVCKPGFGGLNCD 603
Score = 178 (67.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 36/82 (43%), Positives = 49/82 (59%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GSL+ C++ G+C+CKPGVTG +CDRC + +AGC C+C+PAG +
Sbjct: 90 GSLSAGCDNSGQCRCKPGVTGQRCDRCQPGFHMLTDAGCTRDQGQLDSKCDCDPAGI--S 147
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
P CDS G+C CK V G +C
Sbjct: 148 GP-CDS--GRCVCKPAVTGERC 166
Score = 170 (64.9 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 50/156 (32%), Positives = 64/156 (41%)
Query: 65 LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVK 122
L+ Q S RC C G C+RC Y + C C C+ GS+ + CD+
Sbjct: 43 LHRQTGSGFRCLNCNDNTAGVHCERCREGFYRHRDRDRCLPCNCHSKGSL--SAGCDN-S 99
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG 182
GQC + G+ + D R K D P G G C+S G
Sbjct: 100 GQCR-CKPGVTGQRCDRCQPGFHMLTDAGCTRDQGQLDSKCDCDPAGISGP----CDS-G 153
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
RC CKP VTG++CDRC +Y A GC C C
Sbjct: 154 RCVCKPAVTGERCDRCRPGYYHLDRANPEGCTQCFC 189
Score = 158 (60.7 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 56/188 (29%), Positives = 74/188 (39%)
Query: 74 RCQCKPGVTGDKCDRCDVNHY-DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
RC C G G C C + D G C C C G+ CD G C S
Sbjct: 381 RCVCPAGYKGQFCQECASGYKRDSARLGPFGACVPCNCQGGGA------CDPDTGDCYS- 433
Query: 129 QLSSRGRVHTELRVQSRKNFDPAG--NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR-CQ 185
G + ++ P G N D R CK P +G S ++ +E C
Sbjct: 434 -----GDENPDIECADC----PIGFYNDPHDPRSCK--PCPCHNGFSCSVMPETEEVVCN 482
Query: 186 -CKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECK 237
C PGVTG +C+ C + FGE G C+ C+CN + NCD + G+C +C
Sbjct: 483 NCPPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNNVDPNASGNCDQLTGRCLKCI 542
Query: 238 DNVEGAQC 245
N G C
Sbjct: 543 YNTAGVYC 550
Score = 155 (59.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 59/234 (25%), Positives = 84/234 (35%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
C+ C G C++C Y + S C CNC G+ C+ + G C
Sbjct: 382 CV-CPAGYKGQFCQECASGYKRDSARLGPFGACVPCNCQGGGA----CDPDTGDCYSGDE 436
Query: 81 VTGDKCDRCDVNHYD--FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
+C C + Y+ CK C C+ S P + V C + G
Sbjct: 437 NPDIECADCPIGFYNDPHDPRSCKPCPCHNGFSCSVMPETEEVV--CNNCPPGVTG-ARC 493
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCD 196
EL DP G R +R C+R + + C+ GRC +C G CD
Sbjct: 494 ELCADGFFG-DPFGER-GPVRPCQRCQCNNNVDPNASGNCDQLTGRCLKCIYNTAGVYCD 551
Query: 197 RCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C ++ A C++C C+P GS D G C CK G C
Sbjct: 552 QCKAGYFGDPLAPNPADKCRACNCSPMGSEPGECRGD---GSCVCKPGFGGLNC 602
Score = 70 (29.7 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACNC 59
G C+ C+ G C++CR YY ++ CT C C
Sbjct: 153 GRCV-CKPAVTGERCDRCRPGYYHLDRANPEGCTQCFC 189
>WB|WBGene00001328 [details] [associations]
symbol:epi-1 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007414 "axonal
defasciculation" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0009408 "response to heat" evidence=IMP]
[GO:0010950 "positive regulation of endopeptidase activity"
evidence=IMP] [GO:0051788 "response to misfolded protein"
evidence=IMP] InterPro:IPR010307 Pfam:PF06009 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0001764 GO:GO:0002119 GO:GO:0010171 GO:GO:0040017
GO:GO:0007155 GO:GO:0009408 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042127 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0040035 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0010950
GO:GO:0005604 GO:GO:0071711 GO:GO:0040027 Pfam:PF02210
GO:GO:0051788 EMBL:Z70286 UniGene:Cel.18380 GeneID:177956
KEGG:cel:CELE_K08C7.3 CTD:177956 GeneTree:ENSGT00700000104140
NextBio:899114 GO:GO:0007414 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 EMBL:AB001074
EMBL:AB016806 PIR:T37316 RefSeq:NP_001023281.1 HSSP:Q92956
ProteinModelPortal:G5EEV6 SMR:G5EEV6 PRIDE:G5EEV6
EnsemblMetazoa:K08C7.3a.1 EnsemblMetazoa:K08C7.3a.2
WormBase:K08C7.3a OMA:CHHALLD Uniprot:G5EEV6
Length = 3704
Score = 327 (120.2 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 74/228 (32%), Positives = 107/228 (46%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C C G+ G C+KC +Y C C C G+ C+S G+C CK G
Sbjct: 627 GQC-PCNGNFTGRTCDKCAAGFYNYPD---CRGCECLLSGAKGQTCDSNGQCYCKGNFEG 682
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK-GQCESAQLSSRGRVHTELRV 142
++CDRC N Y+F C+ C CNP+G ++ CD V G+ S + GR+
Sbjct: 683 ERCDRCKPNFYNFPI--CEECNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRICD---- 736
Query: 143 QSRKNF-DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 200
Q + F D + R C D G LN C+ + G+C CK G +CD+C
Sbjct: 737 QCKPTFWDLQYHHEDGCRSC--DCNVNGTISGLNT-CDLKTGQCMCKKNADGRRCDQCAD 793
Query: 201 NHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y + + GC+SC C+ G+++ CD GQC+C+ V G +C
Sbjct: 794 GFYRLNSYNQMGCESCHCDIGGALR--AECDITSGQCKCRPRVTGLRC 839
Score = 326 (119.8 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 82/259 (31%), Positives = 116/259 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTAC 57
C CNG S C D + G C DC+ + +G +CE C + +Y + G + C AC
Sbjct: 1830 CECNGHSATC--DPDT-------GICTDCEHNTNGDHCEFCNEGHYGNATNGSPYDCMAC 1880
Query: 58 NCN--PIGSLNLQCN--SEGR---CQCKPGVTGDKCDRCD---VNHYDFGEAGCKSCECN 107
C P + C+ EG+ C CKPG TGD+CDRC H C C+CN
Sbjct: 1881 ACPFAPTNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCN 1940
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
++ ++ +C G C + ++ GR H E F G+ + + C +
Sbjct: 1941 GNNNLTDSRSCHPNSGDCYLCEQNTDGR-HCE---SCAAWF--YGDAV-TAKNCS--SCE 1991
Query: 168 LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPN 226
GS N G C+CK V GD CDRC +H+ F + GC+ C C A NT
Sbjct: 1992 CSQCGSQYCD-NKSGGCECKINVEGDSCDRCKPDHWGFSKCQGCQGCHCGTAAF--NT-Q 2047
Query: 227 CDSVKGQCECKDNVEGAQC 245
C+ GQC C+ G +C
Sbjct: 2048 CNVENGQCTCRPGATGMRC 2066
Score = 288 (106.4 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 74/231 (32%), Positives = 110/231 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ G C++C +Y G C AC C+ G + +C++ G+C C T
Sbjct: 581 GQCL-CKEGFAGDKCDRCDIAFY---GYPNCKACACDGAGITSPECDATSGQCPCNGNFT 636
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G CD+C Y++ + C+ CEC +G+ T CDS GQC +G E
Sbjct: 637 GRTCDKCAAGFYNYPD--CRGCECLLSGAKGQT--CDS-NGQCYC-----KGNFEGERCD 686
Query: 143 QSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQ-CN--SEGR-CQCKPGVTGDKCDR 197
+ + NF ++ C+ + P G + + Q C+ S G C C+ VTG CD+
Sbjct: 687 RCKPNF-------YNFPICEECNCNP--SGVTRDFQGCDKVSPGELCSCRKHVTGRICDQ 737
Query: 198 CDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +D E GC+SC+CN G++ CD GQC CK N +G +C
Sbjct: 738 CKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRC 788
Score = 279 (103.3 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 73/254 (28%), Positives = 115/254 (45%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCN 60
N F+ C +E G C +C+ G C++C ++ Q SG++ C+ C CN
Sbjct: 1888 NNFAKSCDVSEE-----GQLLQC-NCKPGYTGDRCDRCASGFFGHPQISGES-CSPCQCN 1940
Query: 61 PIGSL--NLQCN-SEGRCQ-CKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSV 112
+L + C+ + G C C+ G C+ C Y G+A C SCEC+ GS
Sbjct: 1941 GNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFY--GDAVTAKNCSSCECSQCGS- 1997
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
CD+ G CE ++ V+ + D W +C+
Sbjct: 1998 ---QYCDNKSGGCEC-----------KINVEG-DSCDRCKPDHWGFSKCQGCQGCHCGTA 2042
Query: 173 SLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
+ N QCN E G+C C+PG TG +C+ C+ ++++GE GC C+C S+ CD
Sbjct: 2043 AFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTV--CDVRT 2100
Query: 232 GQCECKDNVEGAQC 245
GQC C++ G++C
Sbjct: 2101 GQCHCQEGATGSRC 2114
Score = 276 (102.2 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 82/272 (30%), Positives = 117/272 (43%)
Query: 1 CNCNGFSNRCFFDKEL-YNRT-----GH---GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC G SN C +D E+ N+ G+ GG C +C+ + +G NC KC Y++ G
Sbjct: 357 CNCFGRSNECEYDAEVDLNKQSIDSQGNYEGGGVCKNCRENTEGVNCNKCSFGYFRPEGV 416
Query: 52 NF-----CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+C+P G+C+C P G+ CD+C +YD + CK CEC
Sbjct: 417 TWNEPQPCKVCDCDPDKHTGACAEETGKCECLPRFVGEDCDQCASGYYDAPK--CKPCEC 474
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
N G++ + C GQC + G E N AG C D
Sbjct: 475 NVNGTIGDV--CLPEDGQCPCK--AGFGGTFCETCADGYTNVT-AG-----CVECVCDAT 524
Query: 167 PLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV---- 221
HG C+ S G+C+CKP G CD+C V + FG+ CK C C+P G+
Sbjct: 525 GSEHGN-----CSASTGQCECKPAYAGLSCDKCQVGY--FGD-DCKFCNCDPMGTEGGVC 576
Query: 222 -KNTPNCDSVKG----QCE-----------CK 237
+ T C +G +C+ CK
Sbjct: 577 DQTTGQCLCKEGFAGDKCDRCDIAFYGYPNCK 608
Score = 263 (97.6 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 66/191 (34%), Positives = 97/191 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIG-SLNLQ-CN--SEGR-CQ 76
G C C+G+ +G C++C+ N+Y NF C CNCNP G + + Q C+ S G C
Sbjct: 672 GQCY-CKGNFEGERCDRCKPNFY-----NFPICEECNCNPSGVTRDFQGCDKVSPGELCS 725
Query: 77 CKPGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
C+ VTG CD+C +D E GC+SC+CN G++ CD GQC + +
Sbjct: 726 CRKHVTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADG 785
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
R R N + N++ C D GG+L +C+ + G+C+C+P VTG
Sbjct: 786 RRCDQCADGFYRLN---SYNQM-GCESCHCDI-----GGALRAECDITSGQCKCRPRVTG 836
Query: 193 DKCDRCDVNHY 203
+CD+ NHY
Sbjct: 837 LRCDQPIENHY 847
Score = 254 (94.5 bits), Expect = 9.0e-20, P = 9.0e-20
Identities = 66/209 (31%), Positives = 97/209 (46%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
+ G C C+ + DG +CE C +Y + N C++C C+ GS N G C+CK
Sbjct: 1954 NSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKN-CSSCECSQCGSQYCD-NKSGGCECKI 2011
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V GD CDRC +H+ F + GC+ C C A NT C+ GQC + + + G +
Sbjct: 2012 NVEGDSCDRCKPDHWGFSKCQGCQGCHCGTAAF--NT-QCNVENGQC-TCRPGATG-MRC 2066
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
E N+ G D C+ D S+ C+ G+C C+ G TG +CD+
Sbjct: 2067 EHCEHGYWNYGEHG---CDKCDCEADL-------SMGTVCDVRTGQCHCQEGATGSRCDQ 2116
Query: 198 CDVNHYDFGEAGCKSC-EC--NPAGSVKN 223
C ++ GC+ C EC + G V N
Sbjct: 2117 CLPSYLRIPTYGCRRCDECVHHLIGDVDN 2145
Score = 212 (79.7 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 65/209 (31%), Positives = 95/209 (45%)
Query: 41 CRDNYYQKSGDNFCTA--CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
C+ + + D A C+C GS + QC G +C+CKPGV G +C+RC +Y+F
Sbjct: 1397 CKQKIFSLTTDFNAAALSCDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYNFP 1456
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
E C C+CN AG CD GQC G+ + V + +DP +
Sbjct: 1457 E--CIKCQCN-AGQ-----QCDERTGQCFCPP-HVEGQT-CDRCVSNAFGYDP----LIG 1502
Query: 158 LRRCKRDTYPLG-HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCEC 215
++C +P G GG+L S G+C C+ + G +CDRC Y F GC
Sbjct: 1503 CQKC--GCHPQGSEGGNLVCDPES-GQCLCRESMGGRQCDRCLAGFYGFPHCYGCSCNRA 1559
Query: 216 NPAGSVKNTPN----C-DSVKG-QCE-CK 237
+ + N C ++V G +CE CK
Sbjct: 1560 GTTEEICDATNAQCKCKENVYGGRCEACK 1588
Score = 209 (78.6 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 2 NCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP 61
NC+ S C Y GG C +C+ + +G +C++C+ +++ S C C+C
Sbjct: 1986 NCS--SCECSQCGSQYCDNKSGG-C-ECKINVEGDSCDRCKPDHWGFSKCQGCQGCHCGT 2041
Query: 62 IGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
+ N QCN E G+C C+PG TG +C+ C+ ++++GE GC C+C S+ CD
Sbjct: 2042 -AAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTV--CDV 2098
Query: 121 VKGQCESAQLSSRGR 135
GQC + ++ R
Sbjct: 2099 RTGQCHCQEGATGSR 2113
Score = 206 (77.6 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 55/199 (27%), Positives = 84/199 (42%)
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY--DFGE--AGCKSCECNPAGSVKNT 115
N + S+ ++ +S +CQC TG C C ++ G C CECN G ++
Sbjct: 1783 NGVDSV-IKASSVEQCQCPAPYTGPSCQLCASGYHRVQSGSFLGACVPCECN--G---HS 1836
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
CD G C + ++ G H E + G+ +D C P + +
Sbjct: 1837 ATCDPDTGICTDCEHNTNGD-HCEFCNEGHYGNATNGSP-YDCMACACPFAPTNNFAK-S 1893
Query: 176 LQCNSEGR---CQCKPGVTGDKCDRCD---VNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
+ EG+ C CKPG TGD+CDRC H C C+CN ++ ++ +C
Sbjct: 1894 CDVSEEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHP 1953
Query: 230 VKGQCE-CKDNVEGAQCRS 247
G C C+ N +G C S
Sbjct: 1954 NSGDCYLCEQNTDGRHCES 1972
Score = 199 (75.1 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 64/223 (28%), Positives = 97/223 (43%)
Query: 39 EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG 97
++C ++ + ++ C I SL N+ C C G + +C+ Y G
Sbjct: 1379 KECSEDNLKNHPESVSDFCK-QKIFSLTTDFNAAALSCDCV--AQGSESFQCE--QYG-G 1432
Query: 98 EAGCKS------CE-CNPAGSVKNTPNCDSVKGQCESAQLSSR--GRVHTELRVQSRKNF 148
+ CK CE C P N P C +K QC + Q G+ V+ +
Sbjct: 1433 QCKCKPGVIGRRCERCAPG--YYNFPEC--IKCQCNAGQQCDERTGQCFCPPHVEGQTCD 1488
Query: 149 DPAGNRI-WD-LRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYD 204
N +D L C++ +P G G NL C+ E G+C C+ + G +CDRC Y
Sbjct: 1489 RCVSNAFGYDPLIGCQKCGCHPQGSEGG-NLVCDPESGQCLCRESMGGRQCDRCLAGFYG 1547
Query: 205 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
F C C CN AG+ + CD+ QC+CK+NV G +C +
Sbjct: 1548 FPH--CYGCSCNRAGTTEEI--CDATNAQCKCKENVYGGRCEA 1586
Score = 190 (71.9 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 72/265 (27%), Positives = 97/265 (36%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK------SGDNF- 53
C CNG + C L + C C+ + G CE+C + QK + +NF
Sbjct: 298 CVCNGHAVTCDI---LEPQRPKSLLCR-CEHNTCGDMCERCCPGFVQKQWQAATAHNNFT 353
Query: 54 CTACNCNPIGSLNLQCNSEGRCQC-KPGVT-------GDKCDRCDVNHYDFGEAGCKSCE 105
C ACNC G N +C + K + G C C N C
Sbjct: 354 CEACNC--FGRSN-ECEYDAEVDLNKQSIDSQGNYEGGGVCKNCRENTEGVNCNKCSFGY 410
Query: 106 CNPAGSVKNTPN----CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC 161
P G N P CD + A G+ R ++ D + +D +C
Sbjct: 411 FRPEGVTWNEPQPCKVCDCDPDKHTGACAEETGKCECLPRFVG-EDCDQCASGYYDAPKC 469
Query: 162 KRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
K G++ C E G+C CK G G C+ C + Y AGC C C+ GS
Sbjct: 470 K--PCECNVNGTIGDVCLPEDGQCPCKAGFGGTFCETC-ADGYTNVTAGCVECVCDATGS 526
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
NC + GQCECK G C
Sbjct: 527 EHG--NCSASTGQCECKPAYAGLSC 549
Score = 185 (70.2 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 42/108 (38%), Positives = 51/108 (47%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRCQCK 78
+GG C C+ G CE+C YY NF C C CN G QC+ G+C C
Sbjct: 1430 YGGQC-KCKPGVIGRRCERCAPGYY-----NFPECIKCQCNA-GQ---QCDERTGQCFCP 1479
Query: 79 PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQC 125
P V G CDRC N + + GC+ C C+P GS CD GQC
Sbjct: 1480 PHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQC 1527
Score = 180 (68.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 46/138 (33%), Positives = 63/138 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C CN +C D+ RTG C C +G C++C N + C C C+
Sbjct: 1461 CQCNA-GQQC--DE----RTGQ---CF-CPPHVEGQTCDRCVSNAFGYDPLIGCQKCGCH 1509
Query: 61 PIGSL--NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
P GS NL C+ E G+C C+ + G +CDRC Y F C C CN AG+ +
Sbjct: 1510 PQGSEGGNLVCDPESGQCLCRESMGGRQCDRCLAGFYGFPH--CYGCSCNRAGTTEEI-- 1565
Query: 118 CDSVKGQCESAQLSSRGR 135
CD+ QC+ + GR
Sbjct: 1566 CDATNAQCKCKENVYGGR 1583
Score = 179 (68.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 53/172 (30%), Positives = 72/172 (41%)
Query: 52 NF--CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECN 107
NF C C CN G QC+ G+C C P V G CDRC N + + GC+ C C+
Sbjct: 1454 NFPECIKCQCNA-GQ---QCDERTGQCFCPPHVEGQTCDRCVSNAFGYDPLIGCQKCGCH 1509
Query: 108 PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
P GS CD GQC + S GR Q + AG + C +
Sbjct: 1510 PQGSEGGNLVCDPESGQCLCRE-SMGGR-------QCDRCL--AG--FYGFPHCYGCS-- 1555
Query: 168 LGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
G+ C++ +C+CK V G +C+ C +D GC +C C
Sbjct: 1556 CNRAGTTEEICDATNAQCKCKENVYGGRCEACKAGTFDLSAENPLGCVNCFC 1607
Score = 176 (67.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/134 (29%), Positives = 69/134 (51%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNCN + D + ++ G C C+ G C++C+ ++ Q ++ C +C+
Sbjct: 701 CNCN--PSGVTRDFQGCDKVSPGELC-SCRKHVTGRICDQCKPTFWDLQYHHEDGCRSCD 757
Query: 59 CNPIGSLN-LQ-CNSE-GRCQCKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSV 112
CN G+++ L C+ + G+C CK G +CD+C Y + + GC+SC C+ G++
Sbjct: 758 CNVNGTISGLNTCDLKTGQCMCKKNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGAL 817
Query: 113 KNTPNCDSVKGQCE 126
+ CD GQC+
Sbjct: 818 R--AECDITSGQCK 829
Score = 176 (67.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 60/195 (30%), Positives = 82/195 (42%)
Query: 75 CQCKPGVTGDKCDRC-----------DVNHYDFGEAGC----KSCECNPAGSVK-NTPNC 118
C+C+ GD C+RC H +F C +S EC V N +
Sbjct: 320 CRCEHNTCGDMCERCCPGFVQKQWQAATAHNNFTCEACNCFGRSNECEYDAEVDLNKQSI 379
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRK----NFDPAGNRIWDLRRCKR-DTYPLGHGGS 173
DS +G E + R +TE V K F P G + + CK D P H G+
Sbjct: 380 DS-QGNYEGGGVCKNCRENTE-GVNCNKCSFGYFRPEGVTWNEPQPCKVCDCDPDKHTGA 437
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
C E G+C+C P G+ CD+C +YD + CK CECN G++ + C G
Sbjct: 438 ----CAEETGKCECLPRFVGEDCDQCASGYYDAPK--CKPCECNVNGTIGDV--CLPEDG 489
Query: 233 QCECKDNVEGAQCRS 247
QC CK G C +
Sbjct: 490 QCPCKAGFGGTFCET 504
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 33/107 (30%), Positives = 47/107 (43%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRC-QCKPGVTG 83
C GP+C+ C Y++ +F C C CN G + C+ + G C C+ G
Sbjct: 1799 CPAPYTGPSCQLCASGYHRVQSGSFLGACVPCECN--GH-SATCDPDTGICTDCEHNTNG 1855
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN-TPNCD-SVKGQ 124
D C+ C+ HY G C +C C P N +CD S +GQ
Sbjct: 1856 DHCEFCNEGHYGNATNGSPYDCMACAC-PFAPTNNFAKSCDVSEEGQ 1901
Score = 60 (26.2 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 2 NCNGFS-NRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
+C G S NR +E+ + T C C+ + G CE C+ + S +N NC
Sbjct: 1550 HCYGCSCNRAGTTEEICDATN--AQC-KCKENVYGGRCEACKAGTFDLSAENPLGCVNCF 1606
Query: 61 PIGSLNLQCNS 71
G + C S
Sbjct: 1607 CFGVTD-SCRS 1616
>UNIPROTKB|F1LRH4 [details] [associations]
symbol:Lamc2 "Protein Lamc2" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0008201 "heparin binding" evidence=IEA] RGD:621053
GO:GO:0008201 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610 CTD:3918
KO:K06246 OMA:DRCLPCN IPI:IPI00393413 RefSeq:NP_001094110.1
UniGene:Rn.9278 ProteinModelPortal:F1LRH4
Ensembl:ENSRNOT00000036947 GeneID:192362 KEGG:rno:192362
NextBio:623057 ArrayExpress:F1LRH4 Uniprot:F1LRH4
Length = 1192
Score = 321 (118.1 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 57/141 (40%), Positives = 85/141 (60%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG S +C FD+EL+ +TG+G CL+C + G +CE+CR+ +Y++ + C CNC+
Sbjct: 28 CDCNGKSRQCVFDQELHRQTGNGFRCLNCNDNTAGVHCERCREGFYRQRDRDRCLPCNCH 87
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSV 112
GSL C++ G+C+CKPGV G +CDRC + +AGC C+C+PAG
Sbjct: 88 SKGSLGAGCDNSGQCRCKPGVVGQRCDRCQPGFHMLTDAGCTRDQRQLDSKCDCDPAGI- 146
Query: 113 KNTPNCDSVKGQCESAQLSSR 133
+ P CDS + C+ A R
Sbjct: 147 -SGP-CDSGRCVCKPAVTGER 165
Score = 183 (69.5 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 62/209 (29%), Positives = 89/209 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPN--CEKCRDNYYQKSGD-NFCTAC 57
CNC G C D + TG DC + P+ C C +Y D C C
Sbjct: 416 CNCQG-GGAC--DPD----TG------DCYSGDENPDIECADCPIGFYNDPHDPRSCKPC 462
Query: 58 NCNPIGSLNLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPA 109
C+ S ++ +E C C PGVTG +C+ C + FGE G C+ C+CN
Sbjct: 463 PCHNGFSCSVMPETEEVVCNNCPPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNN 522
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DP-AGNRIWDLRRCKRDTY 166
+ NCD + G+C ++ G ++ + Q + + DP A N R C +
Sbjct: 523 VDPSASGNCDQLTGRCLKCIYNTAG-IYCD---QCKAGYFGDPLAPNPADKCRACNCN-- 576
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
P+G +C S+G C CKPG G C
Sbjct: 577 PVGSEPG---ECRSDGSCVCKPGFGGLNC 602
Score = 172 (65.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--------KSCECNPAGSVKN 223
GSL C++ G+C+CKPGV G +CDRC + +AGC C+C+PAG +
Sbjct: 90 GSLGAGCDNSGQCRCKPGVVGQRCDRCQPGFHMLTDAGCTRDQRQLDSKCDCDPAGI--S 147
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
P CDS G+C CK V G +C
Sbjct: 148 GP-CDS--GRCVCKPAVTGERC 166
Score = 168 (64.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 62/234 (26%), Positives = 85/234 (36%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD----NFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
C+ C G C++C Y + S C CNC G+ C+ + G C
Sbjct: 382 CV-CPAGYKGQFCQECASGYKRDSARLGPFGTCVPCNCQGGGA----CDPDTGDCYSGDE 436
Query: 81 VTGDKCDRCDVNHYD--FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
+C C + Y+ CK C C+ S P + V C + G
Sbjct: 437 NPDIECADCPIGFYNDPHDPRSCKPCPCHNGFSCSVMPETEEVV--CNNCPPGVTG-ARC 493
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGVTGDKCD 196
EL DP G R +R C+R S + C+ GRC +C G CD
Sbjct: 494 ELCADGFFG-DPFGER-GPVRPCQRCQCNNNVDPSASGNCDQLTGRCLKCIYNTAGIYCD 551
Query: 197 RCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C ++ A C++C CNP GS C S G C CK G C
Sbjct: 552 QCKAGYFGDPLAPNPADKCRACNCNPVGSEPG--ECRS-DGSCVCKPGFGGLNC 602
Score = 162 (62.1 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 51/158 (32%), Positives = 66/158 (41%)
Query: 65 LNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVK 122
L+ Q + RC C G C+RC Y + C C C+ GS+ CD+
Sbjct: 43 LHRQTGNGFRCLNCNDNTAGVHCERCREGFYRQRDRDRCLPCNCHSKGSLG--AGCDN-S 99
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRC--KRDTYPLGHGGSLNLQCNS 180
GQC + G+ + D R D R+ K D P G G C+S
Sbjct: 100 GQCR-CKPGVVGQRCDRCQPGFHMLTDAGCTR--DQRQLDSKCDCDPAGISGP----CDS 152
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GRC CKP VTG++CDRC +Y A GC C C
Sbjct: 153 -GRCVCKPAVTGERCDRCRAGYYHLDRANPEGCTQCFC 189
Score = 157 (60.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 56/188 (29%), Positives = 74/188 (39%)
Query: 74 RCQCKPGVTGDKCDRCDVNHY-DFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
RC C G G C C + D G C C C G+ CD G C S
Sbjct: 381 RCVCPAGYKGQFCQECASGYKRDSARLGPFGTCVPCNCQGGGA------CDPDTGDCYS- 433
Query: 129 QLSSRGRVHTELRVQSRKNFDPAG--NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR-CQ 185
G + ++ P G N D R CK P +G S ++ +E C
Sbjct: 434 -----GDENPDIECADC----PIGFYNDPHDPRSCK--PCPCHNGFSCSVMPETEEVVCN 482
Query: 186 -CKPGVTGDKCDRCDVNHYD--FGEAG----CKSCECNPAGSVKNTPNCDSVKGQC-ECK 237
C PGVTG +C+ C + FGE G C+ C+CN + NCD + G+C +C
Sbjct: 483 NCPPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNNVDPSASGNCDQLTGRCLKCI 542
Query: 238 DNVEGAQC 245
N G C
Sbjct: 543 YNTAGIYC 550
Score = 69 (29.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACNC 59
G C+ C+ G C++CR YY ++ CT C C
Sbjct: 153 GRCV-CKPAVTGERCDRCRAGYYHLDRANPEGCTQCFC 189
>UNIPROTKB|F1M1L0 [details] [associations]
symbol:RGD1565947 "Protein RGD1565947" species:10116
"Rattus norvegicus" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0016322
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
PROSITE:PS51117 GO:GO:0060668 IPI:IPI00948933
Ensembl:ENSRNOT00000064724 ArrayExpress:F1M1L0 Uniprot:F1M1L0
Length = 408
Score = 280 (103.6 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 55/142 (38%), Positives = 82/142 (57%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 138 CKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 197
Query: 54 CTACNCNPIGSLNLQ------CN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C AC+C+P+GS L C+ S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 198 CKACSCHPVGSAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 257
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 258 --AGS------CDPLTGDCISS 271
Score = 154 (59.3 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 69/228 (30%), Positives = 92/228 (40%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---SEGRCQC 77
GH CL +G R P K ++ G C C N GS C ++ +
Sbjct: 72 GHADQCLPVEGFR--P--VKAPGAFHVVHGK--CM-CKHNTAGSHCQHCAPLYNDRPWEA 124
Query: 78 KPGVTG--DKCDRCDVN-HYDFGEAGCKSCEC--NPAGSVKNTPNCD-SVKGQCESAQLS 131
G TG ++C C N H D E N +G V N NC + +GQ Q
Sbjct: 125 ADGRTGAPNECRTCKCNGHADTCHFDINVWEASGNRSGGVCN--NCQHNTEGQ--HCQRC 180
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHG----GSLNLQCNSEGRCQC 186
G + +LR + F CK +P+G S+ S G C C
Sbjct: 181 KPG-FYRDLR----RPFSAPD-------ACKACSCHPVGSAILPFSSVTFCDPSNGDCPC 228
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
KPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 229 KPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 268
Score = 113 (44.8 bits), Expect = 0.00055, P = 0.00055
Identities = 30/77 (38%), Positives = 36/77 (46%)
Query: 175 NLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV----KNTPNCD 228
N Q N+EG+ CQ CKPG D R + D CK+C C+P GS + CD
Sbjct: 167 NCQHNTEGQHCQRCKPGFYRDL--RRPFSAPD----ACKACSCHPVGSAILPFSSVTFCD 220
Query: 229 SVKGQCECKDNVEGAQC 245
G C CK V G C
Sbjct: 221 PSNGDCPCKPGVAGPHC 237
Score = 42 (19.8 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 182 GRCQCKPGVTGDKCDRCDVNH 202
G+C+CK V G+ C + +
Sbjct: 310 GKCECKEQVLGNPKAFCGMKY 330
>UNIPROTKB|Q13751 [details] [associations]
symbol:LAMB3 "Laminin subunit beta-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 EMBL:CH471100 GO:GO:0005198
GO:GO:0050873 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_111155 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
GO:GO:0031581 MIM:226650 Orphanet:79402 EMBL:AL031316
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AL023754 MIM:226700 Orphanet:79404 GO:GO:0005610 EMBL:L25541
EMBL:U17760 EMBL:U17745 EMBL:U17746 EMBL:U17747 EMBL:U17748
EMBL:U17749 EMBL:U17750 EMBL:U17751 EMBL:U17752 EMBL:U17753
EMBL:U17754 EMBL:U17755 EMBL:U17756 EMBL:U17757 EMBL:U17758
EMBL:U17759 EMBL:D37766 EMBL:AY035783 EMBL:BC075838 IPI:IPI00299404
PIR:A53612 RefSeq:NP_000219.2 RefSeq:NP_001017402.1
RefSeq:NP_001121113.1 UniGene:Hs.497636 ProteinModelPortal:Q13751
SMR:Q13751 MINT:MINT-4053402 STRING:Q13751 PhosphoSite:Q13751
DMDM:2497600 PaxDb:Q13751 PRIDE:Q13751 DNASU:3914
Ensembl:ENST00000356082 Ensembl:ENST00000367030
Ensembl:ENST00000391911 Ensembl:ENST00000455193 GeneID:3914
KEGG:hsa:3914 UCSC:uc001hhg.3 CTD:3914 GeneCards:GC01M209788
HGNC:HGNC:6490 HPA:HPA008069 MIM:150310 neXtProt:NX_Q13751
PharmGKB:PA30278 eggNOG:NOG289025 HOGENOM:HOG000113279
HOVERGEN:HBG052302 InParanoid:Q13751 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z PhylomeDB:Q13751 ChiTaRS:LAMB3 GenomeRNAi:3914
NextBio:15375 PMAP-CutDB:Q13751 ArrayExpress:Q13751 Bgee:Q13751
CleanEx:HS_LAMB3 Genevestigator:Q13751 GermOnline:ENSG00000196878
Uniprot:Q13751
Length = 1172
Score = 319 (117.4 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 78/263 (29%), Positives = 125/263 (47%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNF--- 53
C+CNG S C FD ++ ++ +GG C +C+ +G NCE+C+ +Y++ + G +
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQET 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C +C C+P G++ C+ G+C CK V G++CD C A GC C+CN
Sbjct: 376 CISCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNI 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
GS ++ P CD G+C L V + + ++ A + C D +
Sbjct: 436 LGSRRDMP-CDEESGRC----LCLPNVVGPKCDQCAPYHWKLASGQ--GCEPCACDPH-- 486
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCD-----RCDVNHYDFGEAGCKSCECNPAGSVK 222
SL+ QCN G+C C+ G G C +C Y GC++C+C+ G+
Sbjct: 487 ---NSLSPQCNQFTGQCPCREGFGGLMCSAAAIRQCPDRTYGDVATGCRACDCDFRGT-- 541
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
P CD G+C C+ + G +C
Sbjct: 542 EGPGCDKASGRCLCRPGLTGPRC 564
Score = 241 (89.9 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 61/199 (30%), Positives = 93/199 (46%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSL-NLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C C+CN +GS ++ C+ E GRC C P
Sbjct: 397 GQCV-CKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDMPCDEESGRCLCLP 455
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C H+ GC+ C C+P S+ +P C+ GQC + G + +
Sbjct: 456 NVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSL--SPQCNQFTGQCPCRE-GFGGLMCS 512
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDR 197
++ + G+ R C D G+ C+ + GRC C+PG+TG +CD+
Sbjct: 513 AAAIRQCPD-RTYGDVATGCRACDCD-----FRGTEGPGCDKASGRCLCRPGLTGPRCDQ 566
Query: 198 CD---VNHYDFGEAGCKSC 213
C N Y A C C
Sbjct: 567 CQRGYCNRYPVCVA-CHPC 584
Score = 218 (81.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 77/273 (28%), Positives = 115/273 (42%)
Query: 1 CNCNGFSNRCFFDK--ELYNRTGHGGH--CLDCQGDRDGPNCEKCRDNYYQK-----SGD 51
C C+G ++RC T H C+ CQ + GPNCE+C Y + G
Sbjct: 250 CFCHGHADRCAPKPGASAGPSTAVQVHDVCV-CQHNTAGPNCERCAPFYNNRPWRPAEGQ 308
Query: 52 NF--CTACNCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN- 107
+ C C+CN G C+ + G G CD C +H + G+ C+ C+ +
Sbjct: 309 DAHECQRCDCN--GHSET-CHFDPAVFAASQGAYGGVCDNCR-DHTE-GK-NCERCQLHY 362
Query: 108 -----PAGSVKNTP-NCD-SVKGQCESAQLSS-RGRVHTELRVQSRKN--FDPA--GNRI 155
P S++ T +C+ G A G+ + VQ + P G
Sbjct: 363 FRNRRPGASIQETCISCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTY 422
Query: 156 WDLRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKS 212
+ + C R D LG ++ C+ E GRC C P V G KCD+C H+ GC+
Sbjct: 423 ANPQGCHRCDCNILG--SRRDMPCDEESGRCLCLPNVVGPKCDQCAPYHWKLASGQGCEP 480
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+P S+ +P C+ GQC C++ G C
Sbjct: 481 CACDPHNSL--SPQCNQFTGQCPCREGFGGLMC 511
>UNIPROTKB|F1MAN8 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 IPI:IPI00190577
Ensembl:ENSRNOT00000008981 ArrayExpress:F1MAN8 Uniprot:F1MAN8
Length = 3719
Score = 325 (119.5 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 76/226 (33%), Positives = 103/226 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
GHC C+ DGP+C++C Y+ G C AC C+P GSL+ QC + G C C+PG TG
Sbjct: 608 GHC-QCRPGFDGPHCDRCLPGYH---GYPDCHACACDPRGSLDQQCGAGGLCHCRPGYTG 663
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C C Y F C C C+ GS+ T CD GQC R RV T LR
Sbjct: 664 ATCQECSPGFYGF--PSCIPCHCSADGSMHTT--CDPTTGQCRC-----RPRV-TGLRC- 712
Query: 144 SRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
D ++ C+ + +P G + ++ C C+ V G CDRC +
Sbjct: 713 -----DMCVPGAYNFPYCEAGSCHPAGLAPANPALPEAQAPCTCRAHVEGPSCDRCKPGY 767
Query: 203 YDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ + GC C C+P G++ C GQC CK +V G C
Sbjct: 768 WGLSSSNPEGCTRCSCDPRGTLGGVTECQG-NGQCFCKAHVCGKTC 812
Score = 294 (108.6 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 83/271 (30%), Positives = 115/271 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC+G + C++D E+ R GG CLDCQ G NCE+C +Y+
Sbjct: 363 CNCHGHAYDCYYDPEVDRRNASQNLDNVYQGGGVCLDCQHHTTGINCERCVPGFYRAPDQ 422
Query: 49 --SGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSC 104
+ C C+C + C GRC C+P TG++C C + DF S
Sbjct: 423 PLDSPHVCQPCDCES-DFTDGTCEDLTGRCYCRPNFTGERCSACAEGYVDFPHCYPLPSF 481
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRG-RVHTEL-RVQSRKNFDPAGNRIWDLRRCK 162
N G + P V C +A R L R + NF GN +L C
Sbjct: 482 PHNDTGE-QVLPAGQIVNCDCNAAGTQGNACRKDPRLGRCVCKPNFQ--GNHC-EL--CA 535
Query: 163 RDTY-PLGHG------GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
Y P H G N C+ E G+C C+ G GDKCD C + ++ F C+ C
Sbjct: 536 PGFYGPSCHPCQCSSPGVANGLCDPESGQCTCRTGFEGDKCDHCALGYFHFPL--CQLCG 593
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+PAG++ CD G C+C+ +G C
Sbjct: 594 CSPAGTLPQ--GCDE-SGHCQCRPGFDGPHC 621
Score = 289 (106.8 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 81/263 (30%), Positives = 111/263 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-GD--NFCTAC 57
C C+G S+RC G G C+ CQ + +G CE+CR + D + C +C
Sbjct: 1867 CQCHGHSDRCL--------PG-SGTCVGCQHNTEGDQCERCRPGFVSSDPSDPASPCVSC 1917
Query: 58 NCN-PIGSLNLQ--C---NSEGRCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECN 107
C + S N C N +C C+PG G C+RC + G + C+ C+C+
Sbjct: 1918 PCPLAVPSNNFADGCILRNGRTQCLCRPGYAGASCERCAPGFFGNPLVLGSS-CQPCDCS 1976
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQS-RKNFDPAGNRIWDLRRCKR-D 164
G +CD + G C + G R +S F GN + C R D
Sbjct: 1977 GNGDPNMIFSDCDPLTGACRGCLRHTTGP-----RCESCAPGF--YGNALLP-GNCTRCD 2028
Query: 165 TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVK 222
P G C+ + GRC CK GVTG +CD C H+ F + GC C C PA
Sbjct: 2029 CSPCG-----TETCDPQTGRCLCKAGVTGQRCDHCLEGHFGFEQCQGCHPCACGPAAEGS 2083
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
C+ GQC C+ G QC
Sbjct: 2084 E---CNPQTGQCHCRPGTTGPQC 2103
Score = 283 (104.7 bits), Expect = 7.6e-23, P = 7.6e-23
Identities = 68/235 (28%), Positives = 103/235 (43%)
Query: 16 LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGR 74
L + G GG C C+ G C++C +Y G C C+C+ GS++ C+ + G+
Sbjct: 645 LDQQCGAGGLC-HCRPGYTGATCQECSPGFY---GFPSCIPCHCSADGSMHTTCDPTTGQ 700
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES-AQLSSR 133
C+C+P VTG +CD C Y+F C++ C+PAG P + C A +
Sbjct: 701 CRCRPRVTGLRCDMCVPGAYNFPY--CEAGSCHPAGLAPANPALPEAQAPCTCRAHVEGP 758
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ + +P G RC D P G G + +C G+C CK V G
Sbjct: 759 SCDRCKPGYWGLSSSNPEG-----CTRCSCD--PRGTLGGVT-ECQGNGQCFCKAHVCGK 810
Query: 194 KCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + A GC+SC C+ G++ C+ G C C+ N +G C
Sbjct: 811 TCAACKDGFFGLDHADYYGCRSCRCDVGGALGQ--GCEPKTGACRCRPNTQGPSC 863
Score = 232 (86.7 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 69/254 (27%), Positives = 107/254 (42%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNCN 60
N F++ C R G CL C+ G +CE+C ++ G + C C+C+
Sbjct: 1926 NNFADGCIL------RNGRT-QCL-CRPGYAGASCERCAPGFFGNPLVLGSS-CQPCDCS 1976
Query: 61 PIGSLNL---QCNS-EGRCQ-CKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPAGSVK 113
G N+ C+ G C+ C TG +C+ C Y C C+C+P G
Sbjct: 1977 GNGDPNMIFSDCDPLTGACRGCLRHTTGPRCESCAPGFYGNALLPGNCTRCDCSPCG--- 2033
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
T CD G+C L G V ++ D + +C+ +P G +
Sbjct: 2034 -TETCDPQTGRC----LCKAG-------VTGQR-CDHCLEGHFGFEQCQ-GCHPCACGPA 2079
Query: 174 LN-LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
+CN + G+C C+PG TG +C C ++ E GC+ C+C P G +CD
Sbjct: 2080 AEGSECNPQTGQCHCRPGTTGPQCLECAPGYWGLPEKGCRRCQC-PRG------HCDPHT 2132
Query: 232 GQCECKDNVEGAQC 245
G+C C + G +C
Sbjct: 2133 GRCTCPPGLSGERC 2146
Score = 223 (83.6 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 64/230 (27%), Positives = 97/230 (42%)
Query: 25 HCLDCQGDRDGPNCEK--CRDNYYQKS--GDNFCTACNCNPIGSLNLQCNS-EGRCQCKP 79
HC QG P+ CR+ S +N C C+ +G++ C G+C C+
Sbjct: 1407 HCAT-QGYHISPSSSSLFCRNAATSLSLFYNNGALPCGCHEVGAVGPTCEPFGGQCPCRG 1465
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC----DSVKGQCESAQLSSRGR 135
V G C RC ++ F C+ C+C + T C +V C Q S G
Sbjct: 1466 HVIGRDCSRCATGYWGF--PNCRPCDCGARLCDELTGQCICPPRTVPPDCLVCQPQSFG- 1522
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
H + + P + D C D+ GH C +C+P V G +C
Sbjct: 1523 CHPLVGCEECNCSGPGVQELTD-PTCDMDS---GH------LCPH----RCRPNVAGRRC 1568
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D C Y + C+ C+C+ AG++ + CD GQC CK+NV+G++C
Sbjct: 1569 DTCAPGFYSY--PSCRPCDCHEAGTMASV--CDPFTGQCHCKENVQGSRC 1614
Score = 211 (79.3 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 65/212 (30%), Positives = 85/212 (40%)
Query: 1 CNC--NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTAC 57
C+C NG N F D + G C C GP CE C +Y + CT C
Sbjct: 1973 CDCSGNGDPNMIFSDCDPLT-----GACRGCLRHTTGPRCESCAPGFYGNALLPGNCTRC 2027
Query: 58 NCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 115
+C+P G+ C+ + GRC CK GVTG +CD C H+ F + GC C C PA
Sbjct: 2028 DCSPCGTET--CDPQTGRCLCKAGVTGQRCDHCLEGHFGFEQCQGCHPCACGPAAEGSE- 2084
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR--CK----RDTYPLG 169
C+ GQC + + G E G R R C R T P G
Sbjct: 2085 --CNPQTGQCH-CRPGTTGPQCLEC-APGYWGLPEKGCRRCQCPRGHCDPHTGRCTCPPG 2140
Query: 170 HGGSLNLQCNSEGRCQC--KPGVTGDKCDRCD 199
G C+ + + +PG G C+ CD
Sbjct: 2141 LSGERCDTCSQQHQVPVPGRPGSHGIHCEVCD 2172
Score = 189 (71.6 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 64/250 (25%), Positives = 98/250 (39%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDC-QGDRDGPNCEKCRDNYYQKSGDNFCTA----- 56
C + RC+ N TG C C +G D P+C + +G+ A
Sbjct: 444 CEDLTGRCYCRP---NFTGE--RCSACAEGYVDFPHCYPLPSFPHNDTGEQVLPAGQIVN 498
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
C+CN G+ C + R + + C++ F C C+C+ G
Sbjct: 499 CDCNAAGTQGNACRKDPRLGRCVCKPNFQGNHCELCAPGFYGPSCHPCQCSSPGVANGL- 557
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
CD GQC + + G + +F P + L C P G+L
Sbjct: 558 -CDPESGQC-TCRTGFEGDKCDHCAL-GYFHF-P----LCQLCGCS----P---AGTLPQ 602
Query: 177 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
C+ G CQC+PG G CDRC ++ + + C +C C+P GS+ C + G C C
Sbjct: 603 GCDESGHCQCRPGFDGPHCDRCLPGYHGYPD--CHACACDPRGSLDQ--QCGA-GGLCHC 657
Query: 237 KDNVEGAQCR 246
+ GA C+
Sbjct: 658 RPGYTGATCQ 667
Score = 168 (64.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 49/187 (26%), Positives = 73/187 (39%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG--SLNLQC-NSEGRCQCKPG 80
G C C+ G C+ C Y +C A +C+P G N ++ C C+
Sbjct: 699 GQCR-CRPRVTGLRCDMCVPGAYNFP---YCEAGSCHPAGLAPANPALPEAQAPCTCRAH 754
Query: 81 VTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G CDRC ++ + GC C C+P G++ C GQC + G+
Sbjct: 755 VEGPSCDRCKPGYWGLSSSNPEGCTRCSCDPRGTLGGVTECQG-NGQC-FCKAHVCGKTC 812
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ D A + R C+ D GG+L C + G C+C+P G C
Sbjct: 813 AACK-DGFFGLDHAD--YYGCRSCRCDV-----GGALGQGCEPKTGACRCRPNTQGPSCS 864
Query: 197 RCDVNHY 203
+HY
Sbjct: 865 EPAKDHY 871
Score = 165 (63.1 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 56/200 (28%), Positives = 78/200 (39%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+G G +C +C Y+ G C C+C G+ L G+C C P
Sbjct: 1458 GGQC-PCRGHVIGRDCSRCATGYW---GFPNCRPCDC---GA-RLCDELTGQCICPPRTV 1509
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTEL 140
C C + GC+ C C+ G + T P CD G R R +
Sbjct: 1510 PPDCLVCQPQSFGCHPLVGCEECNCSGPGVQELTDPTCDMDSGHL----CPHRCRPN--- 1562
Query: 141 RVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
V R+ D + C+ D + G S+ C+ G+C CK V G +CD+C
Sbjct: 1563 -VAGRR-CDTCAPGFYSYPSCRPCDCHEAGTMASV---CDPFTGQCHCKENVQGSRCDQC 1617
Query: 199 DVNHYDFGEA---GCKSCEC 215
V + A GC C C
Sbjct: 1618 RVGTFSLDAANPKGCTRCFC 1637
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 49/198 (24%), Positives = 77/198 (38%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLD-CQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
CNC+G + D +GH C C+ + G C+ C +Y C C+C
Sbjct: 1532 CNCSGPGVQELTDPTCDMDSGH--LCPHRCRPNVAGRRCDTCAPGFYSYPS---CRPCDC 1586
Query: 60 NPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC-ECNPAGSVKNTPN 117
+ G++ C+ G+C CK V G +CD+C V + A K C C G+ + N
Sbjct: 1587 HEAGTMASVCDPFTGQCHCKENVQGSRCDQCRVGTFSLDAANPKGCTRCFCFGATERCGN 1646
Query: 118 CDSVKGQCESAQ----LSSRGRV--HTE------LRVQSRKNFDPAGNRIWDLRRCKRDT 165
+ + + + LSS +V H L R D W
Sbjct: 1647 SNYARHEFMDMEGWVLLSSDRQVVPHEHRPEMELLHADLRLVADTFPELYWQAPPSYLGD 1706
Query: 166 YPLGHGGSLNLQCNSEGR 183
+GG+L+ + +SE R
Sbjct: 1707 RVSSYGGTLHYELHSETR 1724
Score = 122 (48.0 bits), Expect = 0.00075, P = 0.00075
Identities = 59/210 (28%), Positives = 79/210 (37%)
Query: 23 GGHC--LDCQGDRDGPN-----CEK----CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS 71
G C DC G+ D PN C+ CR +G C +C G+ L N
Sbjct: 1967 GSSCQPCDCSGNGD-PNMIFSDCDPLTGACRGCLRHTTGPR-CESCAPGFYGNALLPGNC 2024
Query: 72 EGRCQCKPGVTGDKCD----RC---------DVNHYDFGEAGCKSCE-CNPA--GSVKNT 115
RC C P T + CD RC +H G G + C+ C+P G
Sbjct: 2025 T-RCDCSPCGT-ETCDPQTGRCLCKAGVTGQRCDHCLEGHFGFEQCQGCHPCACGPAAEG 2082
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL--RRCKRDTYPLGHGGS 173
C+ GQC + + G E P W L + C+R P GH
Sbjct: 2083 SECNPQTGQCH-CRPGTTGPQCLECA--------PG---YWGLPEKGCRRCQCPRGH--- 2127
Query: 174 LNLQCNSE-GRCQCKPGVTGDKCDRCDVNH 202
C+ GRC C PG++G++CD C H
Sbjct: 2128 ----CDPHTGRCTCPPGLSGERCDTCSQQH 2153
>UNIPROTKB|F1LU77 [details] [associations]
symbol:F1LU77 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 GO:GO:0005610 IPI:IPI00768265
Ensembl:ENSRNOT00000015750 ArrayExpress:F1LU77 Uniprot:F1LU77
Length = 3149
Score = 323 (118.8 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 74/228 (32%), Positives = 114/228 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G CL C+ +GP C+ CR Y C AC C+ GS + C+ E G+C+C PGVT
Sbjct: 410 GRCL-CRPGVEGPRCDSCRSGSYSFP---ICQACQCSTSGSYPVPCDPETGQCECLPGVT 465
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC YDF S C+PAG++ ++ K S S ++ +L
Sbjct: 466 GRRCDRCLSGAYDFPYCQGSSSVCDPAGTMDSSLGYCQCKLHVTSPTCSVCKPLYWDL-- 523
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVN 201
+++N P G C+ + G + +C E G C CK VTGD CD C
Sbjct: 524 -AKEN--PRG-----CSECQ--CHEAGTVSGIG-ECGQEDGDCSCKAHVTGDACDTCADG 572
Query: 202 HYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
++ ++ GC+ C+C+ G++ T C G+C+C++++EG QC+
Sbjct: 573 YFSLEKSNYFGCQGCQCDIGGAL--TTMCSGPSGECQCREHIEGKQCQ 618
Score = 304 (112.1 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 83/268 (30%), Positives = 123/268 (45%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTG---HGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+G + C++D+ + N G GG C+DCQ + G NCEKC Y++ G
Sbjct: 259 CNCHGHAVDCYYDEAVSRQQASLNSKGVYTGGGVCIDCQHNTAGVNCEKCAKGYFRPHGV 318
Query: 52 -----NFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C C+C+P + +C+ GRC CKP +GD C+ C +Y+F C
Sbjct: 319 PVEALHGCIPCSCDPDRAD--ECDQGSGRCHCKPNFSGDFCETCADGYYNF--PFCLRIP 374
Query: 106 CNPAGSVK-NTPNCDSVKG-QCESAQL-----SSRGRVHTELRVQSRKNFDPAGNRIWDL 158
P ++ P ++KG C + RGR V+ + D + +
Sbjct: 375 VFPDYTLNPEDPMAGNIKGCDCNLEGVLPEICDDRGRCLCRPGVEGPR-CDSCRSGSYSF 433
Query: 159 RRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
C+ GS + C+ E G+C+C PGVTG +CDRC YDF S C+P
Sbjct: 434 PICQ--ACQCSTSGSYPVPCDPETGQCECLPGVTGRRCDRCLSGAYDFPYCQGSSSVCDP 491
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AG++ DS G C+CK +V C
Sbjct: 492 AGTM------DSSLGYCQCKLHVTSPTC 513
Score = 272 (100.8 bits), Expect = 9.2e-22, P = 9.2e-22
Identities = 78/258 (30%), Positives = 107/258 (41%)
Query: 10 CFFDKELYNRTGHG-GHCLDCQGDRDGPNCEKCRDNYYQ---------------KSGDNF 53
C D + + G G C C+ + G CE C D YY D
Sbjct: 329 CSCDPDRADECDQGSGRC-HCKPNFSGDFCETCADGYYNFPFCLRIPVFPDYTLNPEDPM 387
Query: 54 C---TACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
C+CN G L C+ GRC C+PGV G +CD C Y F C++C+C+ +G
Sbjct: 388 AGNIKGCDCNLEGVLPEICDDRGRCLCRPGVEGPRCDSCRSGSYSFPI--CQACQCSTSG 445
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
S P CD GQCE G V R+ D + +D C+ +
Sbjct: 446 SYP-VP-CDPETGQCECLP----G-------VTGRR-CDRCLSGAYDFPYCQGSSSVCDP 491
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNC 227
G+++ +S G CQCK VT C C ++D + GC C+C+ AG+V C
Sbjct: 492 AGTMD---SSLGYCQCKLHVTSPTCSVCKPLYWDLAKENPRGCSECQCHEAGTVSGIGEC 548
Query: 228 DSVKGQCECKDNVEGAQC 245
G C CK +V G C
Sbjct: 549 GQEDGDCSCKAHVTGDAC 566
Score = 230 (86.0 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 49/136 (36%), Positives = 66/136 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC + G G C++CQ + G +CE+C++ YY + C C C
Sbjct: 1591 CNCNGHSNRC--------QDG-SGVCINCQHNTAGEHCERCQEGYYGSAIHGSCRVCPCP 1641
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVK 113
S C +G RC CKPG TG +C+RC ++ FG C+ C CN G
Sbjct: 1642 HTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQFG 1700
Query: 114 NTPNCDSVKGQCESAQ 129
CD + G C S +
Sbjct: 1701 T---CDPLTGDCVSQE 1713
Score = 196 (74.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 58/193 (30%), Positives = 83/193 (43%)
Query: 63 GSLNLQCNSEGRC--QCKP------GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
G++ +C+ G C P G T + V Y +G CK C C
Sbjct: 1168 GAVPCECHPAGAAVHHCSPEGGAPAGPTSSEGSAHAVQQY-YGFPHCKPCNCGRR----- 1221
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
C+ V G+C + R + E+ + NF P ++ C R G +
Sbjct: 1222 --LCEEVTGKCLCPPNTVRPQC--EVCEMNSFNFHPVAG--CEVCNCSRK----GTVEAA 1271
Query: 175 NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
+C+ + G+C+CKP VTG +CD+C Y F E C C CN G+ CD G
Sbjct: 1272 VSECDRDSGQCRCKPRVTGQQCDKCAPGFYHFPE--CVPCSCNRDGTEPGV--CDPGTGA 1327
Query: 234 CECKDNVEGAQCR 246
C CK+NVEG QC+
Sbjct: 1328 CMCKENVEGPQCQ 1340
Score = 186 (70.5 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 58/185 (31%), Positives = 76/185 (41%)
Query: 75 CQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C C P TGD C C +Y F C C CN G ++ C G C + Q
Sbjct: 1558 CTCPPDYTGDSCQGCRPGYYRDIKSFPAGRCVPCNCN--G---HSNRCQDGSGVCINCQH 1612
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG---RCQCK 187
++ G H E R Q + + G+ I C+ P H S C +G RC CK
Sbjct: 1613 NTAGE-HCE-RCQ--EGY--YGSAIHG--SCR--VCPCPHTNSFATGCAVDGGAVRCACK 1662
Query: 188 PGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNTPNCDSVKGQC---ECKDNV 240
PG TG +C+RC ++ FG C+ C CN G CD + G C E KD
Sbjct: 1663 PGYTGAQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQFGT---CDPLTGDCVSQEPKDGS 1718
Query: 241 EGAQC 245
+C
Sbjct: 1719 PAEEC 1723
Score = 180 (68.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 50/186 (26%), Positives = 78/186 (41%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN--CNPIGSLNLQCNSEGRCQCKPGV 81
G C +C G C++C Y +C + C+P G+++ +S G CQCK V
Sbjct: 456 GQC-ECLPGVTGRRCDRCLSGAYDFP---YCQGSSSVCDPAGTMD---SSLGYCQCKLHV 508
Query: 82 TGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
T C C ++D + GC C+C+ AG+V C G C S + G
Sbjct: 509 TSPTCSVCKPLYWDLAKENPRGCSECQCHEAGTVSGIGECGQEDGDC-SCKAHVTGDACD 567
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
+ F + + + C+ D GG+L C+ G CQC+ + G +C R
Sbjct: 568 TC---ADGYFSLEKSNYFGCQGCQCDI-----GGALTTMCSGPSGECQCREHIEGKQCQR 619
Query: 198 CDVNHY 203
+ N Y
Sbjct: 620 PESNCY 625
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 52/199 (26%), Positives = 74/199 (37%)
Query: 25 HCLDCQGDRDGP-NCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
HC G GP + E Q G C CNC C G+C C P
Sbjct: 1183 HCSPEGGAPAGPTSSEGSAHAVQQYYGFPHCKPCNCG-----RRLCEEVTGKCLCPPNTV 1237
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPN-CDSVKGQCESAQLSSRGRVHTEL 140
+C+ C++N ++F AGC+ C C+ G+V+ + CD GQC + RV
Sbjct: 1238 RPQCEVCEMNSFNFHPVAGCEVCNCSRKGTVEAAVSECDRDSGQCRC-----KPRV---- 1288
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCD 199
+ + D + C + G+ C+ G C CK V G +C C
Sbjct: 1289 ---TGQQCDKCAPGFYHFPECVPCS--CNRDGTEPGVCDPGTGACMCKENVEGPQCQFCR 1343
Query: 200 VNHYDFGEA---GCKSCEC 215
+ A GC C C
Sbjct: 1344 EGSFYLDSANPEGCTRCFC 1362
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 66/246 (26%), Positives = 100/246 (40%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG--RCQCKPGV 81
GH + + +RD P R YY + C CN N E RC+C+
Sbjct: 173 GHLIS-KAERD-PTVT--RRYYYSIKDISVGGRCVCNGHAEACSADNPEKQFRCKCQHHT 228
Query: 82 TGDKCDRC--DVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
GD C+RC N + A C++C C+ G + ++V Q A L+S+
Sbjct: 229 CGDTCNRCCAGYNQRPWRPAAQDQHNECEACNCH--GHAVDCYYDEAVSRQ--QASLNSK 284
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------GSLNLQCNSE----- 181
G V+T V + AG + +C + Y HG G + C+ +
Sbjct: 285 G-VYTGGGVCIDCQHNTAGV---NCEKCAKG-YFRPHGVPVEALHGCIPCSCDPDRADEC 339
Query: 182 ----GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK-NTPNCDSVKGQCEC 236
GRC CKP +GD C+ C +Y+F C P ++ P ++KG C+C
Sbjct: 340 DQGSGRCHCKPNFSGDFCETCADGYYNF--PFCLRIPVFPDYTLNPEDPMAGNIKG-CDC 396
Query: 237 KDNVEG 242
N+EG
Sbjct: 397 --NLEG 400
Score = 130 (50.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 33/97 (34%), Positives = 44/97 (45%)
Query: 20 TGHG--GHCLD---CQGDRDGPNCEKCRDNYYQ--KSGD-NFCTACNCNPIGSLNLQCNS 71
TG G H ++ C D G +C+ CR YY+ KS C CNCN G N +
Sbjct: 1546 TGSGPRAHLVEMCTCPPDYTGDSCQGCRPGYYRDIKSFPAGRCVPCNCN--GHSNRCQDG 1603
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHYDFGEAG-CKSCEC 106
G C C+ G+ C+RC +Y G C+ C C
Sbjct: 1604 SGVCINCQHNTAGEHCERCQEGYYGSAIHGSCRVCPC 1640
Score = 68 (29.0 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 23/68 (33%), Positives = 28/68 (41%)
Query: 1 CNCNGFSNRCFFDK-ELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-----SGD--N 52
C CNG + C D E R C CQ G C +C Y Q+ + D N
Sbjct: 202 CVCNGHAEACSADNPEKQFR------C-KCQHHTCGDTCNRCCAGYNQRPWRPAAQDQHN 254
Query: 53 FCTACNCN 60
C ACNC+
Sbjct: 255 ECEACNCH 262
Score = 44 (20.5 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 25/75 (33%), Positives = 30/75 (40%)
Query: 22 HGGHCLDCQGDRDG--PN-CEK------CRDNYYQKSGDNFCTACNCNPIGSLNLQ-CNS 71
H C+ C +RDG P C+ C++N G C C GS L N
Sbjct: 1302 HFPECVPCSCNRDGTEPGVCDPGTGACMCKENV---EGPQ-CQFCR---EGSFYLDSANP 1354
Query: 72 EG--RCQCKPGVTGD 84
EG RC C GV D
Sbjct: 1355 EGCTRCFCF-GVNTD 1368
>UNIPROTKB|E2RPP1 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 CTD:3909 KO:K06240 OMA:DSCQGCS EMBL:AAEX03005452
RefSeq:XP_537297.2 Ensembl:ENSCAFT00000028869 GeneID:480173
KEGG:cfa:480173 Uniprot:E2RPP1
Length = 3337
Score = 323 (118.8 bits), Expect = 3.8e-27, P = 3.8e-27
Identities = 74/229 (32%), Positives = 115/229 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ +GP C+ CR +Y C AC C+ +GS CN G+C+C+PG+T
Sbjct: 507 GRCL-CRPGVEGPRCDACRVGFYSFP---ICQACQCSVLGSYQTPCNPVTGQCECQPGIT 562
Query: 83 GDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CDRC YDF G +S C+PAG++ ++ K ES S ++ L
Sbjct: 563 GQRCDRCLSGAYDFPHCQGSRSV-CDPAGTLDSSLGYCQCKPHAESPSCSICKPLYWNL- 620
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
+++N P G C+ + G + +C +G C CK V+GD CD C+
Sbjct: 621 --AKEN--PNG-----CSECQ--CHVAGTVSGIG-ECGQRDGDCHCKSHVSGDSCDTCED 668
Query: 201 NHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
++ ++ GC+ C+C+ G+V TP C G C C+++V G C+
Sbjct: 669 GYFALKKSNYFGCQGCQCDIGGAV--TPMCSGPSGGCHCREHVVGKACQ 715
Score = 317 (116.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 86/269 (31%), Positives = 125/269 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTG----HG-----GHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D ++ + HG G C++CQ + G NCE C YY+ G
Sbjct: 356 CNCHGHAIDCYYDPDVERQQASLNIHGIYAGGGVCINCQHNTAGINCENCAKGYYRPYGV 415
Query: 51 --D--NFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
D + C C+CNP + + + S GRC CKP GD C++C V +Y+F C
Sbjct: 416 PVDAPHGCIPCSCNPEHADDCEPGS-GRCTCKPNFQGDNCEKCAVGYYNF--PFCLRIPI 472
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA--GNRIWDLRRCKRD 164
P + +P D V G + + G + R P G R D R
Sbjct: 473 FPVSTP--SPE-DPVAGDIKGCDCNWEGVLPEICDAYGRCLCRPGVEGPRC-DACRVGFY 528
Query: 165 TYPLGHG------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECN 216
++P+ GS CN G+C+C+PG+TG +CDRC YDF G +S C+
Sbjct: 529 SFPICQACQCSVLGSYQTPCNPVTGQCECQPGITGQRCDRCLSGAYDFPHCQGSRSV-CD 587
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
PAG++ DS G C+CK + E C
Sbjct: 588 PAGTL------DSSLGYCQCKPHAESPSC 610
Score = 284 (105.0 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 65/191 (34%), Positives = 92/191 (48%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P G++ C+ EG +C C+P V G +C RC + +Y F CK C C P
Sbjct: 1269 CECHPTGAIGRPCSPEGGQCPCRPSVIGRQCTRCRMGYYGFPH--CKPCNCGPR------ 1320
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
CD + G+C + R + E+ +F P + C R G G+
Sbjct: 1321 -LCDEMTGKCLCPPHTVRPQC--EVCDTHSFSFHPLAG--CEGCNCSRR----GTVGAAT 1371
Query: 176 LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
+C+ + G+C+CKP +TG +CDRC Y F E C C CN G+ CD G C
Sbjct: 1372 RECDRDHGQCRCKPRITGRQCDRCASGFYHFPE--CIPCHCNKDGTESGV--CDPGTGVC 1427
Query: 235 ECKDNVEGAQC 245
CK+NVEG +C
Sbjct: 1428 LCKENVEGTEC 1438
Score = 222 (83.2 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 46/132 (34%), Positives = 66/132 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC + G G C++CQ + G +CE+C++ +Y+ + C+ C C
Sbjct: 1690 CNCNGHSNRC--------QDG-SGICINCQHNTAGEHCERCKEGHYRNTIHGSCSVCPCP 1740
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVK 113
S C G RC CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1741 HSNSFATGCVVTGGNVRCSCKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGHLS 1799
Query: 114 NTPNCDSVKGQC 125
+ C + G C
Sbjct: 1800 S---CHPLTGDC 1808
Score = 219 (82.2 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 59/192 (30%), Positives = 83/192 (43%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
C+CN G L C++ GRC C+PGV G +CD C V Y F C++C+C+ GS + TP
Sbjct: 491 CDCNWEGVLPEICDAYGRCLCRPGVEGPRCDACRVGFYSFPI--CQACQCSVLGSYQ-TP 547
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
C+ V GQCE Q G+ D + +D C+ G+L+
Sbjct: 548 -CNPVTGQCE-CQPGITGQ-----------RCDRCLSGAYDFPHCQGSRSVCDPAGTLDS 594
Query: 177 Q---CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
C + + P + C N GC C+C+ AG+V C G
Sbjct: 595 SLGYCQCKPHAE-SPSCS--ICKPLYWNLAKENPNGCSECQCHVAGTVSGIGECGQRDGD 651
Query: 234 CECKDNVEGAQC 245
C CK +V G C
Sbjct: 652 CHCKSHVSGDSC 663
Score = 175 (66.7 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 51/181 (28%), Positives = 70/181 (38%)
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C C P TGD C C +Y G + C P ++ C G C + Q ++ G
Sbjct: 1657 CACPPDYTGDSCQGCSPGYYR-DNRGSYTGRCVPCNCNGHSNRCQDGSGICINCQHNTAG 1715
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG---RCQCKPGVT 191
H E + G+ C P H S C G RC CKPG T
Sbjct: 1716 E-HCERCKEGHYRNTIHGS-------CS--VCPCPHSNSFATGCVVTGGNVRCSCKPGYT 1765
Query: 192 GDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNTPNCDSVKGQC---ECKDNVEGAQ 244
G +C+RC ++ FG C+ C CN G + + C + G C E KD+ +
Sbjct: 1766 GTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGHLSS---CHPLTGDCINQEPKDDSPAEE 1821
Query: 245 C 245
C
Sbjct: 1822 C 1822
Score = 172 (65.6 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 38/105 (36%), Positives = 48/105 (45%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C C+ G C +CR YY G C CNC P L G+C C P
Sbjct: 1285 GGQC-PCRPSVIGRQCTRCRMGYY---GFPHCKPCNCGP----RLCDEMTGKCLCPPHTV 1336
Query: 83 GDKCDRCDVNHYDFGE-AGCKSCECNPAGSV-KNTPNCDSVKGQC 125
+C+ CD + + F AGC+ C C+ G+V T CD GQC
Sbjct: 1337 RPQCEVCDTHSFSFHPLAGCEGCNCSRRGTVGAATRECDRDHGQC 1381
Score = 171 (65.3 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 45/134 (33%), Positives = 59/134 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN---PIGSLNLQCNSE-GRCQCKP 79
G CL C P CE C + + C CNC+ +G+ +C+ + G+C+CKP
Sbjct: 1327 GKCL-CPPHTVRPQCEVCDTHSFSFHPLAGCEGCNCSRRGTVGAATRECDRDHGQCRCKP 1385
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
+TG +CDRC Y F E C C CN G+ CD G C L TE
Sbjct: 1386 RITGRQCDRCASGFYHFPE--CIPCHCNKDGTESGV--CDPGTGVC----LCKENVEGTE 1437
Query: 140 LRVQSRKNF--DPA 151
V +F DPA
Sbjct: 1438 CNVCREGSFYLDPA 1451
Score = 170 (64.9 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 49/186 (26%), Positives = 73/186 (39%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN--CNPIGSLNLQCNSEGRCQCKPGV 81
G C +CQ G C++C Y C C+P G+L+ +S G CQCKP
Sbjct: 553 GQC-ECQPGITGQRCDRCLSGAYDFP---HCQGSRSVCDPAGTLD---SSLGYCQCKPHA 605
Query: 82 TGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
C C +++ + GC C+C+ AG+V C G C S T
Sbjct: 606 ESPSCSICKPLYWNLAKENPNGCSECQCHVAGTVSGIGECGQRDGDCHCKSHVSGDSCDT 665
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
F + + + C+ D GG++ C+ G C C+ V G C R
Sbjct: 666 ----CEDGYFALKKSNYFGCQGCQCDI-----GGAVTPMCSGPSGGCHCREHVVGKACQR 716
Query: 198 CDVNHY 203
+ N+Y
Sbjct: 717 PENNYY 722
Score = 156 (60.0 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 47/168 (27%), Positives = 65/168 (38%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSV 112
C CNC P L G+C C P +C+ CD + + F AGC+ C C+ G+V
Sbjct: 1312 CKPCNCGP----RLCDEMTGKCLCPPHTVRPQCEVCDTHSFSFHPLAGCEGCNCSRRGTV 1367
Query: 113 -KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
T CD GQC R+ R+ D + + C
Sbjct: 1368 GAATRECDRDHGQCRCKP-----------RITGRQ-CDRCASGFYHFPECI--PCHCNKD 1413
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
G+ + C+ G C CK V G +C+ C + A GC SC C
Sbjct: 1414 GTESGVCDPGTGVCLCKENVEGTECNVCREGSFYLDPANPKGCTSCFC 1461
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 29/98 (29%), Positives = 41/98 (41%)
Query: 19 RTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC 75
R H C D G +C+ C YY+ + ++ C CNCN G N + G C
Sbjct: 1649 RRAHNVEMCACPPDYTGDSCQGCSPGYYRDNRGSYTGRCVPCNCN--GHSNRCQDGSGIC 1706
Query: 76 -QCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGS 111
C+ G+ C+RC HY + C C C + S
Sbjct: 1707 INCQHNTAGEHCERCKEGHYRNTIHGSCSVCPCPHSNS 1744
Score = 86 (35.3 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G CEC+P G++ P C GQC C+ +V G QC
Sbjct: 1265 GALPCECHPTGAI-GRP-CSPEGGQCPCRPSVIGRQC 1299
Score = 72 (30.4 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 24 GHCLDCQGDRDGPNCEKCRDN--YYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
G CL C+ + +G C CR+ Y + CT+C C G +N C+S + + K
Sbjct: 1425 GVCL-CKENVEGTECNVCREGSFYLDPANPKGCTSCFC--FG-INSHCHSTHKRRAK 1477
Score = 40 (19.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 17/63 (26%), Positives = 22/63 (34%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC------TACNCNPIGSLNLQ-CNSEGR 74
H C+ C ++DG C +G C T CN GS L N +G
Sbjct: 1401 HFPECIPCHCNKDGTESGVCDPG----TGVCLCKENVEGTECNVCREGSFYLDPANPKGC 1456
Query: 75 CQC 77
C
Sbjct: 1457 TSC 1459
>UNIPROTKB|F1MMK1 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005610 "laminin-5 complex" evidence=IEA] GO:GO:0050873
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005610
GeneTree:ENSGT00620000087753 OMA:RSQMEED EMBL:DAAA02043815
EMBL:DAAA02043816 IPI:IPI00712889 UniGene:Bt.16740
Ensembl:ENSBTAT00000022005 Uniprot:F1MMK1
Length = 1172
Score = 317 (116.6 bits), Expect = 4.2e-27, P = 4.2e-27
Identities = 82/266 (30%), Positives = 121/266 (45%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSG---DNF 53
C+CNG S C FD ++ ++ HGG C +C+ +G NCE+C+ +Y++ + G
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGRNCERCQLHYFRNRRPGAPIQET 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNH--YDFGEA-GCKSCECNP 108
C C C+P G++ C+ G+C CK V G++CD C F GC C+C+
Sbjct: 376 CIPCECDPDGAVPGAPCDPLTGQCVCKEHVQGERCDLCKPGFTGLTFSNPQGCHRCDCSV 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G+ ++ P CD G+C H V K D W L R P
Sbjct: 436 LGARRDVP-CDEETGRCVCLP-------H----VVGPK-CDQCAPHHWKLAS-GRGCEPC 481
Query: 169 G---HGGSLNLQCNS-EGRCQCKPGVTGDKCD-----RCDVNHYDFGEAGCKSCECNPAG 219
H SL QCN G+C C+ G G C +C Y AGC++C+C+ G
Sbjct: 482 ACDPHN-SLGPQCNQFTGQCACREGFGGLTCRAAAIRQCPDRTYGDAAAGCRACDCDFRG 540
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ P CD G+C C+ + G +C
Sbjct: 541 T--EGPGCDKASGRCLCRPGLTGPRC 564
Score = 271 (100.5 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 76/248 (30%), Positives = 110/248 (44%)
Query: 26 CLDCQGDRDGPNCEKCRDNY----YQKSGD---NFCTACNCN---------PIGSLNLQC 69
C+ CQ + GPNCE+C Y ++ + D + C C+CN P Q
Sbjct: 279 CV-CQHNTAGPNCERCAPFYNNRPWRPAEDQDPHECQRCDCNGHSETCHFDPAVFAASQG 337
Query: 70 NSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVK 122
G C C+ G C+RC ++++ G C CEC+P G+V P CD +
Sbjct: 338 AHGGVCDNCRDHTEGRNCERCQLHYFRNRRPGAPIQETCIPCECDPDGAVPGAP-CDPLT 396
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
GQC + V E + F G + + C R D LG ++ C+ E
Sbjct: 397 GQCVCKE-----HVQGERCDLCKPGF--TGLTFSNPQGCHRCDCSVLG--ARRDVPCDEE 447
Query: 182 -GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
GRC C P V G KCD+C +H+ GC+ C C+P S+ P C+ GQC C++
Sbjct: 448 TGRCVCLPHVVGPKCDQCAPHHWKLASGRGCEPCACDPHNSLG--PQCNQFTGQCACREG 505
Query: 240 VEGAQCRS 247
G CR+
Sbjct: 506 FGGLTCRA 513
Score = 235 (87.8 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 60/197 (30%), Positives = 93/197 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSL-NLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C C+C+ +G+ ++ C+ E GRC C P
Sbjct: 397 GQCV-CKEHVQGERCDLCKPGFTGLTFSNPQGCHRCDCSVLGARRDVPCDEETGRCVCLP 455
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C +H+ GC+ C C+P S+ P C+ GQC + G + T
Sbjct: 456 HVVGPKCDQCAPHHWKLASGRGCEPCACDPHNSLG--PQCNQFTGQCACRE--GFGGL-T 510
Query: 139 ELRVQSRKNFDPA-GNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCD 196
R+ D G+ R C D G+ C+ + GRC C+PG+TG +CD
Sbjct: 511 CRAAAIRQCPDRTYGDAAAGCRACDCD-----FRGTEGPGCDKASGRCLCRPGLTGPRCD 565
Query: 197 RCDVNHYDFGEAGCKSC 213
+C + D C +C
Sbjct: 566 QCQRGYCDRAPV-CVAC 581
>RGD|1565947 [details] [associations]
symbol:Ntn4 "netrin 4" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO] [GO:0016322 "neuron remodeling"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=ISO] InterPro:IPR001134 PROSITE:PS50189 RGD:1565947
GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 PROSITE:PS51117
GeneTree:ENSGT00700000104042 GO:GO:0060668 IPI:IPI00359984
Ensembl:ENSRNOT00000007412 ArrayExpress:F1M4Q9 Uniprot:F1M4Q9
Length = 436
Score = 280 (103.6 bits), Expect = 6.2e-27, Sum P(2) = 6.2e-27
Identities = 55/142 (38%), Positives = 82/142 (57%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 138 CKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 197
Query: 54 CTACNCNPIGSLNLQ------CN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C AC+C+P+GS L C+ S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 198 CKACSCHPVGSAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 257
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 258 --AGS------CDPLTGDCISS 271
Score = 154 (59.3 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 69/228 (30%), Positives = 92/228 (40%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN---SEGRCQC 77
GH CL +G R P K ++ G C C N GS C ++ +
Sbjct: 72 GHADQCLPVEGFR--P--VKAPGAFHVVHGK--CM-CKHNTAGSHCQHCAPLYNDRPWEA 124
Query: 78 KPGVTG--DKCDRCDVN-HYDFGEAGCKSCEC--NPAGSVKNTPNCD-SVKGQCESAQLS 131
G TG ++C C N H D E N +G V N NC + +GQ Q
Sbjct: 125 ADGRTGAPNECRTCKCNGHADTCHFDINVWEASGNRSGGVCN--NCQHNTEGQ--HCQRC 180
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHG----GSLNLQCNSEGRCQC 186
G + +LR + F CK +P+G S+ S G C C
Sbjct: 181 KPG-FYRDLR----RPFSAPD-------ACKACSCHPVGSAILPFSSVTFCDPSNGDCPC 228
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
KPGV G CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 229 KPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS------CDPLTGDC 268
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 30/77 (38%), Positives = 36/77 (46%)
Query: 175 NLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV----KNTPNCD 228
N Q N+EG+ CQ CKPG D R + D CK+C C+P GS + CD
Sbjct: 167 NCQHNTEGQHCQRCKPGFYRDL--RRPFSAPD----ACKACSCHPVGSAILPFSSVTFCD 220
Query: 229 SVKGQCECKDNVEGAQC 245
G C CK V G C
Sbjct: 221 PSNGDCPCKPGVAGPHC 237
Score = 42 (19.8 bits), Expect = 6.2e-27, Sum P(2) = 6.2e-27
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 182 GRCQCKPGVTGDKCDRCDVNH 202
G+C+CK V G+ C + +
Sbjct: 310 GKCECKEQVLGNPKAFCGMKY 330
>ZFIN|ZDB-GENE-030131-9823 [details] [associations]
symbol:lama5 "laminin, alpha 5" species:7955
"Danio rerio" [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0033333 "fin development" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0035141 "medial fin morphogenesis"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0035138 "pectoral fin morphogenesis" evidence=IMP] [GO:0033334
"fin morphogenesis" evidence=IMP] InterPro:IPR000742
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
PROSITE:PS50026 ZFIN:ZDB-GENE-030131-9823 GO:GO:0008104
GO:GO:0030155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016337 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
eggNOG:COG0419 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OrthoDB:EOG4VHK5G GO:GO:0035138 EMBL:DQ232730 IPI:IPI00734953
RefSeq:NP_001034260.1 UniGene:Dr.12091 ProteinModelPortal:Q2Q1W5
STRING:Q2Q1W5 PRIDE:Q2Q1W5 GeneID:321243 KEGG:dre:321243
NextBio:20807298 ArrayExpress:Q2Q1W5 Bgee:Q2Q1W5 GO:GO:0035141
Uniprot:Q2Q1W5
Length = 3664
Score = 320 (117.7 bits), Expect = 8.8e-27, P = 8.8e-27
Identities = 84/264 (31%), Positives = 126/264 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNF-CTA 56
CNCNG S++C D G G C++C+ + G +CEKC ++ + G + C++
Sbjct: 1843 CNCNGHSDQCL-D-------G-SGICVNCRHNTAGNHCEKCLGGFHHNNTVDGHSVSCSS 1893
Query: 57 CNCN-PIGSLN--LQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCEC 106
C C + S N ++C + RC C PG G KC+RC +Y G C+ C C
Sbjct: 1894 CPCPLQVASNNFAIRCVEKPNNMRCLCMPGYAGSKCERCAPGYYGNPVVIGST-CQPCNC 1952
Query: 107 NPAGSVKNT--PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR- 163
N S N +C + G+C+S ++ G H E+ F G+ I + C R
Sbjct: 1953 N-GNSDPNMLFSDCHPLTGECQSCMHNTAGP-HCEI---CAPGF--YGDAI-TAKNCTRC 2004
Query: 164 DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSV 221
+ P G C+S G+C CKPGV G +CDRC+ + F GC+ C+C+ + ++
Sbjct: 2005 NCSPCG-----TAHCDSHTGQCHCKPGVVGAQCDRCEHGTFGFDSCTGCRKCDCDASAAL 2059
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
CD V G C C+ V G C
Sbjct: 2060 VQA--CDPVNGACACQPGVNGPNC 2081
Score = 281 (104.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 71/226 (31%), Positives = 103/226 (45%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC 86
+C+ + GP C++C YY CT C+C+ GS + C+ G+C C P + G +C
Sbjct: 639 NCRPNYSGPRCQQCAPGYYSYPS---CTPCDCSVEGSRSSSCDPVSGQCVCLPNIEGQRC 695
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
D C Y F C+ CNPAGSV N + G C G V E
Sbjct: 696 DSCSPGSYGFPL--CQLGTCNPAGSVHN--DILPTVGSCVCRPYVE-G-VACERCKPLYW 749
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
N P + I+ C +T G+L+ +C G+C CKP V C+ C +
Sbjct: 750 NLSP--DTIYGCSTCDCNT-----AGTLSEVAECTQRTGQCFCKPNVCSGTCNVCKDGFF 802
Query: 204 DFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ + GC+ C+C+ GSV CD G+C C+ NVEG +C+
Sbjct: 803 NLQKDSYFGCQGCQCDIGGSVGQA--CDERYGRCRCRPNVEGPKCK 846
Score = 265 (98.3 bits), Expect = 6.1e-21, P = 6.1e-21
Identities = 74/265 (27%), Positives = 122/265 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNC+ S+ C++D E+ R GG C++CQ G NCE+C YY +S D
Sbjct: 351 CNCHRHSSECYYDPEIDQRRSSLDMQGEYNGGGVCVECQHHTTGVNCERCIPGYY-RSPD 409
Query: 52 N-----F-CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG--CKS 103
+ F C+ C C + + GRC CKP TG+ CD+C + F E +
Sbjct: 410 HPLESPFACSKCQCESEFTEGTCEDRTGRCYCKPNYTGENCDQCAEGYEHFPECYQVLIN 469
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQ-SRKNFDPAGNRIWDLRRC 161
E PAG +N +C+ E R +T + + + + ++ D + + + C
Sbjct: 470 GEVRPAG--ENIIDCECNAAGTEGNSCRPDPRTNTCVCKPEFTGEHCDTCSHGYFSIN-C 526
Query: 162 KRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 220
+R G G L+ C++ G+C C+ G G C++C ++++ C+ C C+ GS
Sbjct: 527 QRCQCS-GQG-CLDGSCDAVTGQCVCRSGFQGYSCEQCAPGYFNYPL--CQYCGCSVVGS 582
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ CD G+C C+ G +C
Sbjct: 583 IPEM--CDPA-GRCLCRPEFTGPRC 604
Score = 250 (93.1 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 59/196 (30%), Positives = 89/196 (45%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C C C+P SL+ C+ +C C+P +G +C +C +Y + C C+C+ GS
Sbjct: 617 CQVCTCDPRTSLDSSCSELDQCNCRPNYSGPRCQQCAPGYYSY--PSCTPCDCSVEGS-- 672
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
+ +CD V GQC + Q + P G+ + L C+ T GS
Sbjct: 673 RSSSCDPVSGQCVCLP---------NIEGQRCDSCSP-GSYGFPL--CQLGT--CNPAGS 718
Query: 174 L-NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDS 229
+ N + G C C+P V G C+RC +++ GC +C+CN AG++ C
Sbjct: 719 VHNDILPTVGSCVCRPYVEGVACERCKPLYWNLSPDTIYGCSTCDCNTAGTLSEVAECTQ 778
Query: 230 VKGQCECKDNVEGAQC 245
GQC CK NV C
Sbjct: 779 RTGQCFCKPNVCSGTC 794
Score = 249 (92.7 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 70/232 (30%), Positives = 91/232 (39%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNL---QCNS-EGRCQ-CK 78
CL C G CE+C YY + C CNCN N+ C+ G CQ C
Sbjct: 1918 CL-CMPGYAGSKCERCAPGYYGNPVVIGSTCQPCNCNGNSDPNMLFSDCHPLTGECQSCM 1976
Query: 79 PGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
G C+ C Y G+A C C C+P G T +CDS GQC G
Sbjct: 1977 HNTAGPHCEICAPGFY--GDAITAKNCTRCNCSPCG----TAHCDSHTGQCHCKP----G 2026
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGD 193
V + F + R+C D +L C+ G C C+PGV G
Sbjct: 2027 VVGAQCDRCEHGTF--GFDSCTGCRKCDCDA-----SAALVQACDPVNGACACQPGVNGP 2079
Query: 194 KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +C H+++ GC+ CEC G CD G+C C + G QC
Sbjct: 2080 NCHQCAPGHWNYSSNGCRKCECK-GG------RCDPRTGECRCTTGLTGKQC 2124
Score = 215 (80.7 bits), Expect = 6.9e-25, Sum P(2) = 6.9e-25
Identities = 55/185 (29%), Positives = 82/185 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-NLQCNSEGRCQCKPGVT 82
G C+ C + +G C+ C Y G C CNP GS+ N + G C C+P V
Sbjct: 682 GQCV-CLPNIEGQRCDSCSPGSY---GFPLCQLGTCNPAGSVHNDILPTVGSCVCRPYVE 737
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C+RC +++ GC +C+CN AG++ C GQC G +
Sbjct: 738 GVACERCKPLYWNLSPDTIYGCSTCDCNTAGTLSEVAECTQRTGQCFCKPNVCSGTCN-- 795
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
V F+ + + + C+ D GGS+ C+ GRC+C+P V G KC +
Sbjct: 796 --VCKDGFFNLQKDSYFGCQGCQCDI-----GGSVGQACDERYGRCRCRPNVEGPKCKQP 848
Query: 199 DVNHY 203
+HY
Sbjct: 849 RPDHY 853
Score = 179 (68.1 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 173 SLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
S+++ C++ G+C+C+ + G +CDRC Y G C+ C CN AG+ N CDS
Sbjct: 1520 SMDISCDTNNGQCRCRNNIVGRQCDRCFPGFY--GYPNCRPCNCNEAGTEMNV--CDSFT 1575
Query: 232 GQCECKDNVEGAQC 245
G+C CK+NVEG +C
Sbjct: 1576 GRCLCKENVEGPRC 1589
Score = 177 (67.4 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 63/241 (26%), Positives = 95/241 (39%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC----TACNCNPI--GSLNLQCNSEGRCQ 76
G + +DC+ + G CR + ++ C T +C+ G ++ C RCQ
Sbjct: 476 GENIIDCECNAAGTEGNSCRPD--PRTNTCVCKPEFTGEHCDTCSHGYFSINCQ---RCQ 530
Query: 77 CK-PGVTGDKCD----RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD----SVKGQC-E 126
C G CD +C V F C+ C A N P C SV G E
Sbjct: 531 CSGQGCLDGSCDAVTGQC-VCRSGFQGYSCEQC----APGYFNYPLCQYCGCSVVGSIPE 585
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
+ R E + D + C+ T SL+ C+ +C C
Sbjct: 586 MCDPAGRCLCRPEF---TGPRCDQCQSGFHSYPNCQVCT--CDPRTSLDSSCSELDQCNC 640
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+P +G +C +C +Y + C C+C+ GS + +CD V GQC C N+EG +C
Sbjct: 641 RPNYSGPRCQQCAPGYYSY--PSCTPCDCSVEGS--RSSSCDPVSGQCVCLPNIEGQRCD 696
Query: 247 S 247
S
Sbjct: 697 S 697
Score = 176 (67.0 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 57/203 (28%), Positives = 82/203 (40%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C+ C+ G +CE+C Y+ C C C+ +GS+ C+ GRC C+P TG
Sbjct: 546 GQCV-CRSGFQGYSCEQCAPGYFNYP---LCQYCGCSVVGSIPEMCDPAGRCLCRPEFTG 601
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT-ELRV 142
+CD+C + + C+ C C+P S+ ++ C + QC S R
Sbjct: 602 PRCDQCQSGFHSY--PNCQVCTCDPRTSLDSS--CSELD-QCNCRPNYSGPRCQQCAPGY 656
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG-RCQ-CKPGVTG------DK 194
S + P + R D P+ G + L N EG RC C PG G
Sbjct: 657 YSYPSCTPCDCSVEGSRSSSCD--PVS-GQCVCLP-NIEGQRCDSCSPGSYGFPLCQLGT 712
Query: 195 CDRCDVNHYDFGEAGCKSCECNP 217
C+ H D SC C P
Sbjct: 713 CNPAGSVHNDILPT-VGSCVCRP 734
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 54/191 (28%), Positives = 73/191 (38%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTAC----NCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRC 89
G C +CR N + T NC P + C G C C P C C
Sbjct: 1437 GGQC-RCRPNVIGRDCSQCATGYYGFPNCRPCNCGSRLCEPVTGECICPPRTLQPDCVTC 1495
Query: 90 DVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ + GC+ C C+ G +CD+ GQC + GR Q + F
Sbjct: 1496 EPQTFGCHPLVGCEMCNCSRPGVTSMDISCDTNNGQCRCRN-NIVGR-------QCDRCF 1547
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN--HYDF 205
P + R C + G +N+ C+S GRC CK V G +CD+C + H D
Sbjct: 1548 -PGFYGYPNCRPCNCNEA----GTEMNV-CDSFTGRCLCKENVEGPRCDQCKLGTFHLDP 1601
Query: 206 GEA-GCKSCEC 215
A GC C C
Sbjct: 1602 TNAKGCTKCFC 1612
Score = 150 (57.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 34/90 (37%), Positives = 47/90 (52%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS-LNLQCNS-EGRCQCKP 79
+ G C C+ + G C++C +Y G C CNCN G+ +N+ C+S GRC CK
Sbjct: 1528 NNGQCR-CRNNIVGRQCDRCFPGFY---GYPNCRPCNCNEAGTEMNV-CDSFTGRCLCKE 1582
Query: 80 GVTGDKCDRCDVN--HYDFGEA-GCKSCEC 106
V G +CD+C + H D A GC C C
Sbjct: 1583 NVEGPRCDQCKLGTFHLDPTNAKGCTKCFC 1612
Score = 145 (56.1 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 50/187 (26%), Positives = 73/187 (39%)
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA---G-CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C C GD C +C +Y + G C C CN G ++ C G C + +
Sbjct: 1810 CLCPGNYLGDSCQQCAPGYYRDNKGLFLGKCVPCNCN--G---HSDQCLDGSGICVNCRH 1864
Query: 131 SSRGRVHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLG-HGGSLNLQCNSEG---RCQ 185
++ G H E + N G+ + C PL + ++C + RC
Sbjct: 1865 NTAGN-HCEKCLGGFHHNNTVDGHSV----SCSSCPCPLQVASNNFAIRCVEKPNNMRCL 1919
Query: 186 CKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNT--PNCDSVKGQCE-CKD 238
C PG G KC+RC +Y G C+ C CN S N +C + G+C+ C
Sbjct: 1920 CMPGYAGSKCERCAPGYYGNPVVIGST-CQPCNCN-GNSDPNMLFSDCHPLTGECQSCMH 1977
Query: 239 NVEGAQC 245
N G C
Sbjct: 1978 NTAGPHC 1984
Score = 129 (50.5 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 34/105 (32%), Positives = 44/105 (41%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G +C +C YY G C CNC GS L C G C C P
Sbjct: 1437 GGQCR-CRPNVIGRDCSQCATGYY---GFPNCRPCNC---GS-RL-CEPVTGECICPPRT 1487
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQC 125
C C+ + GC+ C C+ G +CD+ GQC
Sbjct: 1488 LQPDCVTCEPQTFGCHPLVGCEMCNCSRPGVTSMDISCDTNNGQC 1532
Score = 121 (47.7 bits), Expect = 6.9e-25, Sum P(2) = 6.9e-25
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C C P C C+ + GC+ C C+ G +CD+ GQC C++N+
Sbjct: 1479 GECICPPRTLQPDCVTCEPQTFGCHPLVGCEMCNCSRPGVTSMDISCDTNNGQCRCRNNI 1538
Query: 241 EGAQC 245
G QC
Sbjct: 1539 VGRQC 1543
Score = 121 (47.7 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 51 DNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
+N C C+ +G+ + C S G+C+C+P V G C +C +Y F C+ C C
Sbjct: 1415 NNGAVPCGCHEVGAESDTCESFGGQCRCRPNVIGRDCSQCATGYYGF--PNCRPCNC--- 1469
Query: 110 GSVKNTPNCDSVKGQC 125
GS C+ V G+C
Sbjct: 1470 GSRL----CEPVTGEC 1481
Score = 121 (47.7 bits), Expect = 0.00096, P = 0.00096
Identities = 30/91 (32%), Positives = 42/91 (46%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQC-NSEGRC-QCKPG 80
CL C G+ G +C++C YY+ + F C CNCN G + QC + G C C+
Sbjct: 1810 CL-CPGNYLGDSCQQCAPGYYRDNKGLFLGKCVPCNCN--GHSD-QCLDGSGICVNCRHN 1865
Query: 81 VTGDKCDRC-----DVNHYDFGEAGCKSCEC 106
G+ C++C N D C SC C
Sbjct: 1866 TAGNHCEKCLGGFHHNNTVDGHSVSCSSCPC 1896
Score = 84 (34.6 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C V+ F G C C+ G+ +T C+S GQC C+ NV G C
Sbjct: 1403 CLSSAVSLSSFFNNGAVPCGCHEVGAESDT--CESFGGQCRCRPNVIGRDC 1451
Score = 72 (30.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
CNCN E+ G CL C+ + +GP C++C+ + N CT C
Sbjct: 1559 CNCNEAGT------EMNVCDSFTGRCL-CKENVEGPRCDQCKLGTFHLDPTNAKGCTKCF 1611
Query: 59 CNPIGSLNLQCNSEGR 74
C G+ + +C+S +
Sbjct: 1612 C--FGATD-RCHSSDK 1624
Score = 64 (27.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 21/84 (25%), Positives = 32/84 (38%)
Query: 42 RDNYYQKSGDNFCTACNCNPIG-SLNLQCNSEG---RCQCKPGVTGDKCDRC--DVNHYD 95
R YY + C CN + N Q ++ +C C+ G CD C N +
Sbjct: 277 RKYYYSIKDISIGGRCVCNGHAEACNAQDPNDPYKLQCDCQHNTCGTSCDGCCPGFNQFP 336
Query: 96 FGEAGCKSC-ECNPAGSVKNTPNC 118
+ A S EC P +++ C
Sbjct: 337 WKPATTYSANECEPCNCHRHSSEC 360
Score = 60 (26.2 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ---KSGDNF---- 53
C CNG + C + + N + C DCQ + G +C+ C + Q K +
Sbjct: 292 CVCNGHAEAC--NAQDPNDP-YKLQC-DCQHNTCGTSCDGCCPGFNQFPWKPATTYSANE 347
Query: 54 CTACNCN 60
C CNC+
Sbjct: 348 CEPCNCH 354
>MGI|MGI:99909 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005608 "laminin-3 complex" evidence=ISO] [GO:0005610
"laminin-5 complex" evidence=IDA] [GO:0005913 "cell-cell adherens
junction" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0030056
"hemidesmosome" evidence=ISO] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031581 "hemidesmosome assembly" evidence=ISO]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:99909 GO:GO:0030155 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOVERGEN:HBG052300 GO:GO:0005610 EMBL:AJ293592
EMBL:U88353 EMBL:X84014 EMBL:X84013 EMBL:L20478 IPI:IPI00125058
IPI:IPI00988354 UniGene:Mm.42012 ProteinModelPortal:Q61789
SMR:Q61789 STRING:Q61789 PhosphoSite:Q61789 PaxDb:Q61789
PRIDE:Q61789 UCSC:uc008ecf.2 UCSC:uc008ech.1 HOGENOM:HOG000048708
CleanEx:MM_LAMA3 Genevestigator:Q61789
GermOnline:ENSMUSG00000024421 Uniprot:Q61789
Length = 3333
Score = 318 (117.0 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 77/230 (33%), Positives = 109/230 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ +GP C+ CR Y C AC C+ IGS + C+ G+C C PG+T
Sbjct: 504 GRCL-CRPGVEGPQCDSCRSGSYSFP---ICQACQCSTIGSYPVPCDPGNGQCDCLPGIT 559
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ--LSSRGRVHTEL 140
G +CDRC YDF C+PAG++ DS G C+ Q S V L
Sbjct: 560 GRQCDRCLSGAYDFPYCQGSGSVCHPAGTL------DSSLGYCQCKQHVASPTCSVCKPL 613
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCD 199
K +P G C+ + G + +C E G C CK VTGD CD C+
Sbjct: 614 YWNLAKE-NPRG-----CSECQ--CHEAGTLSGIG-ECGQEDGDCSCKAHVTGDACDTCE 664
Query: 200 VNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ ++ GC+ C+C+ G++ T C G C+C+++VEG QC+
Sbjct: 665 DGFFSLEKSNYFGCQGCQCDIGGAL--TTMCSGPSGVCQCREHVEGKQCQ 712
Score = 283 (104.7 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 80/268 (29%), Positives = 118/268 (44%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTG---HGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D ++ N G GG C++CQ + G NCEKC Y++ G
Sbjct: 353 CNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYFRPHGV 412
Query: 51 --DNF--CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
D C C+C+P + + S G C CKP +GD C+ C +Y+F C
Sbjct: 413 PVDALHGCIPCSCDPERADDCDQGS-GHCHCKPNFSGDYCETCADGYYNF--PFCLRIPV 469
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
P + +P D V G + + G V E+ + G C+ +Y
Sbjct: 470 FP--NYTPSPE-DPVAGNIKGCDCNLEG-VLPEICDDRGRCLCRPGVEGPQCDSCRSGSY 525
Query: 167 --PLGHG------GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
P+ GS + C+ G+C C PG+TG +CDRC YDF C+P
Sbjct: 526 SFPICQACQCSTIGSYPVPCDPGNGQCDCLPGITGRQCDRCLSGAYDFPYCQGSGSVCHP 585
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AG++ DS G C+CK +V C
Sbjct: 586 AGTL------DSSLGYCQCKQHVASPTC 607
Score = 221 (82.9 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 48/132 (36%), Positives = 65/132 (49%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC + G G C++CQ + G +CE+C+ +Y + C C C
Sbjct: 1687 CNCNGHSNRC--------QDG-SGICINCQHNTAGEHCERCQAGHYGNAIHGSCRVCPCP 1737
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVK 113
S C +G RC CKPG TG +C+RC ++ FG C+ C CN G +
Sbjct: 1738 HTNSFATGCAVDGGAVRCACKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLG 1796
Query: 114 NTPNCDSVKGQC 125
P CD + G C
Sbjct: 1797 --P-CDPLTGDC 1805
Score = 201 (75.8 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 64/229 (27%), Positives = 86/229 (37%)
Query: 23 GGHCLDC-QGDRDGPNCEKCR--DNYYQKSGDNFC---TACNCNPIGSLNLQCNSEGRCQ 76
G +C C G + P C + NY D C+CN G L C+ GRC
Sbjct: 448 GDYCETCADGYYNFPFCLRIPVFPNYTPSPEDPVAGNIKGCDCNLEGVLPEICDDRGRCL 507
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
C+PGV G +CD C Y F C++C+C+ GS P CD GQC+ GR
Sbjct: 508 CRPGVEGPQCDSCRSGSYSFPI--CQACQCSTIGSYP-VP-CDPGNGQCDCLP-GITGR- 561
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
D + +D C+ G+L+ Q T C
Sbjct: 562 ----------QCDRCLSGAYDFPYCQGSGSVCHPAGTLDSSLGYCQCKQHVASPTCSVCK 611
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N GC C+C+ AG++ C G C CK +V G C
Sbjct: 612 PLYWNLAKENPRGCSECQCHEAGTLSGIGECGQEDGDCSCKAHVTGDAC 660
Score = 192 (72.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 57/197 (28%), Positives = 81/197 (41%)
Query: 52 NFCTACNCNPIGSL-NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P G+ + C+ EG G V +G CK C C
Sbjct: 1258 NGAIPCECDPAGTAGHHHCSPEGG-SALAGPMSSGASAAAVRQGYYGFPYCKPCNCGRR- 1315
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
C+ V G+C + R + E+ + NF P D+ C R G
Sbjct: 1316 ------LCEEVTGKCLCPPHTVRPQC--EVCEMNSFNFHPVAG--CDVCNCSRK----GT 1361
Query: 171 GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
+ +C+ + G+C+CKP VTG +CD+C C C CN G+ + CD
Sbjct: 1362 IEAAVSECDRDSGQCRCKPRVTGQQCDKCAPGLLPV-PLKCVPCSCNRDGTEPSV--CDP 1418
Query: 230 VKGQCECKDNVEGAQCR 246
G C CK+NVEG QC+
Sbjct: 1419 ETGACMCKENVEGPQCQ 1435
Score = 187 (70.9 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 60/185 (32%), Positives = 79/185 (42%)
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA---G-CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C C P TGD C C +Y ++ G C C CN G ++ C G C + Q
Sbjct: 1654 CACPPDYTGDSCQGCRPGYYWDNKSLPVGRCVPCNCN--G---HSNRCQDGSGICINCQH 1708
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG---RCQCK 187
++ G H E R Q+ GN I C+ P H S C +G RC CK
Sbjct: 1709 NTAGE-HCE-RCQAGHY----GNAIHG--SCR--VCPCPHTNSFATGCAVDGGAVRCACK 1758
Query: 188 PGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNTPNCDSVKGQC---ECKDNV 240
PG TG +C+RC ++ FG C+ C CN G + P CD + G C E KD
Sbjct: 1759 PGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLG--P-CDPLTGDCVNQEPKDGS 1814
Query: 241 EGAQC 245
+C
Sbjct: 1815 PAEEC 1819
Score = 176 (67.0 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 50/187 (26%), Positives = 77/187 (41%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN--CNPIGSLNLQCNSEGRCQCKPGV 81
G C DC G C++C Y +C C+P G+L+ +S G CQCK V
Sbjct: 550 GQC-DCLPGITGRQCDRCLSGAYDFP---YCQGSGSVCHPAGTLD---SSLGYCQCKQHV 602
Query: 82 TGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
C C +++ + GC C+C+ AG++ C G C S + V
Sbjct: 603 ASPTCSVCKPLYWNLAKENPRGCSECQCHEAGTLSGIGECGQEDGDC-----SCKAHVTG 657
Query: 139 ELRVQSRKNF-DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCD 196
+ F + + + C+ D GG+L C+ G CQC+ V G +C
Sbjct: 658 DACDTCEDGFFSLEKSNYFGCQGCQCDI-----GGALTTMCSGPSGVCQCREHVEGKQCQ 712
Query: 197 RCDVNHY 203
R + N+Y
Sbjct: 713 RPENNYY 719
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 35/106 (33%), Positives = 48/106 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL---QCNSE-GRCQCKP 79
G CL C P CE C N + C CNC+ G++ +C+ + G+C+CKP
Sbjct: 1322 GKCL-CPPHTVRPQCEVCEMNSFNFHPVAGCDVCNCSRKGTIEAAVSECDRDSGQCRCKP 1380
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
VTG +CD+C C C CN G+ + CD G C
Sbjct: 1381 RVTGQQCDKCAPGLLPV-PLKCVPCSCNRDGTEPSV--CDPETGAC 1423
Score = 151 (58.2 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 47/173 (27%), Positives = 69/173 (39%)
Query: 50 GDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECN 107
G +C CNC C G+C C P +C+ C++N ++F AGC C C+
Sbjct: 1303 GFPYCKPCNCG-----RRLCEEVTGKCLCPPHTVRPQCEVCEMNSFNFHPVAGCDVCNCS 1357
Query: 108 PAGSVKNTPN-CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
G+++ + CD GQC + RV + + P + C RD
Sbjct: 1358 RKGTIEAAVSECDRDSGQCRC-----KPRVTGQQCDKCAPGLLPVPLKCVPCS-CNRD-- 1409
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC-DVNHY--DFGEAGCKSCEC 215
G+ C+ E G C CK V G +C C + + Y GC C C
Sbjct: 1410 -----GTEPSVCDPETGACMCKENVEGPQCQLCREGSFYLDPTNPKGCTKCFC 1457
Score = 135 (52.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 34/97 (35%), Positives = 43/97 (44%)
Query: 20 TGHG--GHCLD---CQGDRDGPNCEKCRDNYY--QKSGD-NFCTACNCNPIGSLNLQCNS 71
TG G H ++ C D G +C+ CR YY KS C CNCN G N +
Sbjct: 1642 TGSGPRAHLVEMCACPPDYTGDSCQGCRPGYYWDNKSLPVGRCVPCNCN--GHSNRCQDG 1699
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHYDFGEAG-CKSCEC 106
G C C+ G+ C+RC HY G C+ C C
Sbjct: 1700 SGICINCQHNTAGEHCERCQAGHYGNAIHGSCRVCPC 1736
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 67/244 (27%), Positives = 96/244 (39%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG--RCQCKPGV 81
GH + + +RD P R YY + C CN N E RC+C+
Sbjct: 267 GHLIS-KAERD-PTVT--RRYYYSIKDISVGGRCVCNGHAEACSADNPEKQFRCECQHHT 322
Query: 82 TGDKCDRC--DVNHYDFGEAGCKS---CE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
GD C+RC N + AG + CE CN G + V+ Q A L+S+G
Sbjct: 323 CGDTCNRCCAGYNQRRWQPAGQEQHNECEACNCHGHAVDCYYDPDVEHQ--QASLNSKG- 379
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-------GSLNLQCNSE------- 181
V+ V + AG + +C + Y HG G + C+ E
Sbjct: 380 VYAGGGVCINCQHNTAGV---NCEKCAKG-YFRPHGVPVDALHGCIPCSCDPERADDCDQ 435
Query: 182 --GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK-NTPNCDSVKGQCECKD 238
G C CKP +GD C+ C +Y+F C P + P ++KG C+C
Sbjct: 436 GSGHCHCKPNFSGDYCETCADGYYNF--PFCLRIPVFPNYTPSPEDPVAGNIKG-CDC-- 490
Query: 239 NVEG 242
N+EG
Sbjct: 491 NLEG 494
Score = 109 (43.4 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 30/85 (35%), Positives = 39/85 (45%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFG---------------E---AG-CKSCECNPAGSVK 222
G C CKP +GD C+ C +Y+F E AG K C+CN G +
Sbjct: 438 GHCHCKPNFSGDYCETCADGYYNFPFCLRIPVFPNYTPSPEDPVAGNIKGCDCNLEGVLP 497
Query: 223 NTPNCDSVKGQCECKDNVEGAQCRS 247
CD +G+C C+ VEG QC S
Sbjct: 498 EI--CDD-RGRCLCRPGVEGPQCDS 519
Score = 79 (32.9 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 24 GHCLDCQGDRDGPNCEKCRDN--YYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
G C+ C+ + +GP C+ CR+ Y + CT C C G +N C S + + K
Sbjct: 1421 GACM-CKENVEGPQCQLCREGSFYLDPTNPKGCTKCFC--FG-VNTDCQSSRKQRAK 1473
Score = 74 (31.1 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 23/68 (33%), Positives = 29/68 (42%)
Query: 1 CNCNGFSNRCFFDK-ELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSGD---N 52
C CNG + C D E R C +CQ G C +C Y +Q +G N
Sbjct: 296 CVCNGHAEACSADNPEKQFR------C-ECQHHTCGDTCNRCCAGYNQRRWQPAGQEQHN 348
Query: 53 FCTACNCN 60
C ACNC+
Sbjct: 349 ECEACNCH 356
Score = 45 (20.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 205 FGEAGCKSCECNPAGS 220
F G CEC+PAG+
Sbjct: 1255 FYHNGAIPCECDPAGT 1270
>UNIPROTKB|F1N8P9 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00823129
Ensembl:ENSGALT00000023564 ArrayExpress:F1N8P9 Uniprot:F1N8P9
Length = 3060
Score = 316 (116.3 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 73/228 (32%), Positives = 106/228 (46%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C DC+ D G C+KC + +Y C CNC+ GS++ CN +G+C C PGV G
Sbjct: 900 GIC-DCKSDVIGQKCDKCLNGFYGLLTGLGCIPCNCSQFGSISEDCNHQGQCHCLPGVAG 958
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+KCDRC + ++GC C+C +N NC++ GQC +RG +L +
Sbjct: 959 EKCDRCAHGFHSLQKSGCTPCDC---AHTQN--NCNADSGQCICPP-HTRGP-KCDLCEE 1011
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 202
+ P CK GS +LQC+ G+CQCK G C RC + +
Sbjct: 1012 NHWGLSPKLG-------CKACN--CSDSGSDSLQCDVLTGQCQCKAEFGGQNCSRCALGY 1062
Query: 203 YDFGEAGCKSCECNPAGS-----VKNTPNCDSVKGQCECKDNVEGAQC 245
D+ + C+ + + K C+ G C CK+NV G QC
Sbjct: 1063 RDYPDCVACDCDLSGTKAEMCDDTKGLCGCEEETGICACKENVFGLQC 1110
Score = 278 (102.9 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 82/263 (31%), Positives = 113/263 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG + C D + G C CQ + GP C++C +Y C C
Sbjct: 723 CKCNGHATEC--DTQ--------GVCFACQHNTTGPFCDQCLPGFYGSPSQGTPEDCQPC 772
Query: 58 NCNPIGSL--NLQ--CN-SEGR---C-QCKPGVTGDKCDRCDVNHYDF----GEAGCKSC 104
C P+ S N C SEG C +C PG TG +C+RC +Y G++ C C
Sbjct: 773 AC-PLSSAANNFSPTCQLSEGEGIVCDKCLPGYTGSRCERCANGYYGNPLVPGQS-CVPC 830
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN + + CD++ GQC ++ G +H E D + R C+
Sbjct: 831 ECNGNVNPQEDGYCDTITGQCLKCVGNTAG-LHCEKCADGYYG-DAVTEK--SCRACECH 886
Query: 165 TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVK 222
GSL+ C+ E G C CK V G KCD+C Y GC C C+ GS+
Sbjct: 887 V-----NGSLSSVCHHETGICDCKSDVIGQKCDKCLNGFYGLLTGLGCIPCNCSQFGSIS 941
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+C+ +GQC C V G +C
Sbjct: 942 E--DCNH-QGQCHCLPGVAGEKC 961
Score = 220 (82.5 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 68/236 (28%), Positives = 102/236 (43%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC-QCKPGVTG 83
+C G +CE C YY+ G F C C CN G +C+++G C C+ TG
Sbjct: 691 ECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCN--GHAT-ECDTQGVCFACQHNTTG 747
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNCDSVKGQCESAQLSSRGRVH 137
CD+C Y G C+ C C P S N +P C +G+ G +
Sbjct: 748 PFCDQCLPGFYGSPSQGTPEDCQPCAC-PLSSAANNFSPTCQLSEGEGIVCDKCLPG--Y 804
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ----CNS-EGRC-QCKPGVT 191
T R + N GN + + C P G++N Q C++ G+C +C
Sbjct: 805 TGSRCERCAN-GYYGNPLVPGQSC----VPCECNGNVNPQEDGYCDTITGQCLKCVGNTA 859
Query: 192 GDKCDRCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C++C +Y E C++CEC+ GS+ + C G C+CK +V G +C
Sbjct: 860 GLHCEKCADGYYGDAVTEKSCRACECHVNGSLSSV--CHHETGICDCKSDVIGQKC 913
Score = 195 (73.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 50/142 (35%), Positives = 65/142 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-GD-NFCTACN 58
C CN S C D E G CL+C+ + G C C YY K G N C+ C
Sbjct: 1384 CQCNNHSETC--DPET-------GKCLNCRDNTVGDYCSACAPGYYGKVIGSVNDCSLCA 1434
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGE---AGCKSCECN 107
C NP+ S + C +G C C PG G C++C + +Y + C C+CN
Sbjct: 1435 CPRANPV-SFSPTCVLKGVQDYHCDACLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCQCN 1493
Query: 108 PAGSVKNTPNCDSVKGQCESAQ 129
P+GSV NCD V G+C Q
Sbjct: 1494 PSGSVH--VNCDRVTGKCPCKQ 1513
Score = 194 (73.4 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 46/117 (39%), Positives = 59/117 (50%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
HC C +G CEKC YY Q G + C C CNP GS+++ C+ G+C CK G
Sbjct: 1456 HCDACLPGYEGQYCEKCSLGYYGDPQLPGGS-CHLCQCNPSGSVHVNCDRVTGKCPCKQG 1514
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
VTG C+ C+ H E C SC+ N G + N N DS+ S L+ G VH
Sbjct: 1515 VTGQLCEECEPRHLLLEEE-CVSCDDNCTGVLLN--NLDSLSENILSLNLT--GVVH 1566
Score = 185 (70.2 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 57/214 (26%), Positives = 82/214 (38%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 99
K + + +S + C C P G C + C PG +K V A
Sbjct: 1326 KFEEMHLGRSRAHLIEQCRC-PAGYAGFSCQN-----CAPGYYREKPKEFSVRETHTIIA 1379
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
C C+CN ++ CD G+C L+ R + + G I +
Sbjct: 1380 PCVPCQCN-----NHSETCDPETGKC----LNCRDNTVGDYCSACAPGY--YGKVIGSVN 1428
Query: 160 RCKRDTYPLGHGGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGE---AGCK 211
C P + S + C +G C C PG G C++C + +Y + C
Sbjct: 1429 DCSLCACPRANPVSFSPTCVLKGVQDYHCDACLPGYEGQYCEKCSLGYYGDPQLPGGSCH 1488
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+CNP+GSV NCD V G+C CK V G C
Sbjct: 1489 LCQCNPSGSVH--VNCDRVTGKCPCKQGVTGQLC 1520
Score = 183 (69.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 61/223 (27%), Positives = 90/223 (40%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF-----------CTACNCNPIGSLNLQCNSE-GRC- 75
C G +C+ C YY++ F C C CN + + C+ E G+C
Sbjct: 1345 CPAGYAGFSCQNCAPGYYREKPKEFSVRETHTIIAPCVPCQCN---NHSETCDPETGKCL 1401
Query: 76 QCKPGVTGDKCDRCDVNHYD--FGEAG-CKSCECNPAGSVKNTPNCDSVKG----QCESA 128
C+ GD C C +Y G C C C A V +P C +KG C++
Sbjct: 1402 NCRDNTVGDYCSACAPGYYGKVIGSVNDCSLCACPRANPVSFSPTC-VLKGVQDYHCDAC 1460
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
G+ + + + G L +C P GS+++ C+ G+C CK
Sbjct: 1461 LPGYEGQYCEKCSLGYYGDPQLPGGSC-HLCQCN----P---SGSVHVNCDRVTGKCPCK 1512
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GVTG C+ C+ H E C SC+ N G + N N DS+
Sbjct: 1513 QGVTGQLCEECEPRHLLLEEE-CVSCDDNCTGVLLN--NLDSL 1552
Score = 172 (65.6 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 58/189 (30%), Positives = 84/189 (44%)
Query: 75 CQCKPGVTGDKCDRCDVNHY--D---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+C G TG C+ C +Y D FG C+ C+CN G + CD+ +G C + Q
Sbjct: 690 CECPQGYTGISCESCLPGYYRVDGILFGGI-CQPCKCN--G---HATECDT-QGVCFACQ 742
Query: 130 LSSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKRDTYPLGHGGS-LNLQCN-SEGR-- 183
++ G Q F P+ D + C PL + + C SEG
Sbjct: 743 HNTTGPFCD----QCLPGFYGSPSQGTPEDCQPC---ACPLSSAANNFSPTCQLSEGEGI 795
Query: 184 -C-QCKPGVTGDKCDRCDVNHYDF----GEAGCKSCECNPAGSVKNTPNCDSVKGQC-EC 236
C +C PG TG +C+RC +Y G++ C CECN + + CD++ GQC +C
Sbjct: 796 VCDKCLPGYTGSRCERCANGYYGNPLVPGQS-CVPCECNGNVNPQEDGYCDTITGQCLKC 854
Query: 237 KDNVEGAQC 245
N G C
Sbjct: 855 VGNTAGLHC 863
Score = 159 (61.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 59/211 (27%), Positives = 88/211 (41%)
Query: 57 CNC--NPIG-SLNLQCNSEGRCQCKPGV--TGDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
C C N G S N C + +PG G+KC++C+ ++ K+ +C +
Sbjct: 271 CQCEHNTCGESCNRCCPGYHQKPWRPGTISAGNKCEKCNCHN--------KAEDCYYNQT 322
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHT---ELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
+ + ++ GQ + HT + + F P +D C YP
Sbjct: 323 IADQKRSMNIHGQYTGGGVCLNCSQHTTGINCEMCADGYFRPQKVSPYDDHPC----YPC 378
Query: 169 GHG--GSLNLQC-------NSE-----GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G GSL+ C +S+ G+CQC+ G TG+KCDRC + G C C
Sbjct: 379 GCDPFGSLSSVCVKDERQSDSQHGTWPGQCQCRDGYTGEKCDRCAFGYR--GYPNCLRCN 436
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ GS+ P C C CK+NVEG C
Sbjct: 437 CSLIGSINEDP-CAE---PCLCKENVEGENC 463
Score = 156 (60.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 41/141 (29%), Positives = 64/141 (45%)
Query: 1 CNCNGFSNRCFFDKELYNR----------TGHGGHCLDCQGDRDGPNCEKCRDNYY--QK 48
CNC+ + C++++ + ++ TG GG CL+C G NCE C D Y+ QK
Sbjct: 308 CNCHNKAEDCYYNQTIADQKRSMNIHGQYTG-GGVCLNCSQHTTGINCEMCADGYFRPQK 366
Query: 49 SG---DNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKC--------DRCDVNHYDF 96
D+ C C C+P GSL+ C E + + G +C ++CD + +
Sbjct: 367 VSPYDDHPCYPCGCDPFGSLSSVCVKDERQSDSQHGTWPGQCQCRDGYTGEKCDRCAFGY 426
Query: 97 -GEAGCKSCECNPAGSVKNTP 116
G C C C+ GS+ P
Sbjct: 427 RGYPNCLRCNCSLIGSINEDP 447
Score = 135 (52.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 55/208 (26%), Positives = 78/208 (37%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL--QCNSEGRC-QCKPGVTGDKCDRCDV 91
G CEKC N + K+ D + + S+N+ Q G C C TG C+ C
Sbjct: 302 GNKCEKC--NCHNKAEDCYYNQTIADQKRSMNIHGQYTGGGVCLNCSQHTTGINCEMCAD 359
Query: 92 NHY------DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
++ + + C C C+P GS+ + C + Q +S + G+
Sbjct: 360 GYFRPQKVSPYDDHPCYPCGCDPFGSLSSV--CVKDERQSDSQHGTWPGQCQCRDGYTGE 417
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF 205
K D C R L GS+N +E C CK V G+ CD C Y+
Sbjct: 418 K-CDRCAFGYRGYPNCLRCNCSLI--GSINEDPCAEP-CLCKENVEGENCDLCKPGFYNL 473
Query: 206 GEA---GCKSCECNPAGSVKNTPNCDSV 230
E GC C C V CDS+
Sbjct: 474 QERNPEGCTECFCFGVSDV-----CDSL 496
Score = 75 (31.5 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C C G + C D E+ + C C+ + G +C +C Y+QK S N
Sbjct: 251 CICYGHARSCPLD-EITKKL----QC-QCEHNTCGESCNRCCPGYHQKPWRPGTISAGNK 304
Query: 54 CTACNCN 60
C CNC+
Sbjct: 305 CEKCNCH 311
Score = 70 (29.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNC 59
CL C+ + +G NC+ C+ +Y Q+ CT C C
Sbjct: 452 CL-CKENVEGENCDLCKPGFYNLQERNPEGCTECFC 486
Score = 61 (26.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 178 CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
C E G C CK V G +C C + GC C C
Sbjct: 1092 CEEETGICACKENVFGLQCSECKPGTFALSANNALGCTPCFC 1133
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 6/14 (42%), Positives = 6/14 (42%)
Query: 234 CECKDNVEGAQCRS 247
CEC G C S
Sbjct: 690 CECPQGYTGISCES 703
>UNIPROTKB|F1NM47 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005608 "laminin-3 complex" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
OMA:EPFYWRL GO:GO:0005606 GO:GO:0005608 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00587004
Ensembl:ENSGALT00000036890 ArrayExpress:F1NM47 Uniprot:F1NM47
Length = 3061
Score = 316 (116.3 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 73/228 (32%), Positives = 106/228 (46%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C DC+ D G C+KC + +Y C CNC+ GS++ CN +G+C C PGV G
Sbjct: 900 GIC-DCKSDVIGQKCDKCLNGFYGLLTGLGCIPCNCSQFGSISEDCNHQGQCHCLPGVAG 958
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+KCDRC + ++GC C+C +N NC++ GQC +RG +L +
Sbjct: 959 EKCDRCAHGFHSLQKSGCTPCDC---AHTQN--NCNADSGQCICPP-HTRGP-KCDLCEE 1011
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 202
+ P CK GS +LQC+ G+CQCK G C RC + +
Sbjct: 1012 NHWGLSPKLG-------CKACN--CSDSGSDSLQCDVLTGQCQCKAEFGGQNCSRCALGY 1062
Query: 203 YDFGEAGCKSCECNPAGS-----VKNTPNCDSVKGQCECKDNVEGAQC 245
D+ + C+ + + K C+ G C CK+NV G QC
Sbjct: 1063 RDYPDCVACDCDLSGTKAEMCDDTKGLCGCEEETGICACKENVFGLQC 1110
Score = 278 (102.9 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 82/263 (31%), Positives = 113/263 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG + C D + G C CQ + GP C++C +Y C C
Sbjct: 723 CKCNGHATEC--DTQ--------GVCFACQHNTTGPFCDQCLPGFYGSPSQGTPEDCQPC 772
Query: 58 NCNPIGSL--NLQ--CN-SEGR---C-QCKPGVTGDKCDRCDVNHYDF----GEAGCKSC 104
C P+ S N C SEG C +C PG TG +C+RC +Y G++ C C
Sbjct: 773 AC-PLSSAANNFSPTCQLSEGEGIVCDKCLPGYTGSRCERCANGYYGNPLVPGQS-CVPC 830
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN + + CD++ GQC ++ G +H E D + R C+
Sbjct: 831 ECNGNVNPQEDGYCDTITGQCLKCVGNTAG-LHCEKCADGYYG-DAVTEK--SCRACECH 886
Query: 165 TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVK 222
GSL+ C+ E G C CK V G KCD+C Y GC C C+ GS+
Sbjct: 887 V-----NGSLSSVCHHETGICDCKSDVIGQKCDKCLNGFYGLLTGLGCIPCNCSQFGSIS 941
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+C+ +GQC C V G +C
Sbjct: 942 E--DCNH-QGQCHCLPGVAGEKC 961
Score = 220 (82.5 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 68/236 (28%), Positives = 102/236 (43%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC-QCKPGVTG 83
+C G +CE C YY+ G F C C CN G +C+++G C C+ TG
Sbjct: 691 ECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCN--GHAT-ECDTQGVCFACQHNTTG 747
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNCDSVKGQCESAQLSSRGRVH 137
CD+C Y G C+ C C P S N +P C +G+ G +
Sbjct: 748 PFCDQCLPGFYGSPSQGTPEDCQPCAC-PLSSAANNFSPTCQLSEGEGIVCDKCLPG--Y 804
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ----CNS-EGRC-QCKPGVT 191
T R + N GN + + C P G++N Q C++ G+C +C
Sbjct: 805 TGSRCERCAN-GYYGNPLVPGQSC----VPCECNGNVNPQEDGYCDTITGQCLKCVGNTA 859
Query: 192 GDKCDRCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C++C +Y E C++CEC+ GS+ + C G C+CK +V G +C
Sbjct: 860 GLHCEKCADGYYGDAVTEKSCRACECHVNGSLSSV--CHHETGICDCKSDVIGQKC 913
Score = 195 (73.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 50/142 (35%), Positives = 65/142 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-GD-NFCTACN 58
C CN S C D E G CL+C+ + G C C YY K G N C+ C
Sbjct: 1384 CQCNNHSETC--DPET-------GKCLNCRDNTVGDYCSACAPGYYGKVIGSVNDCSLCA 1434
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGE---AGCKSCECN 107
C NP+ S + C +G C C PG G C++C + +Y + C C+CN
Sbjct: 1435 CPRANPV-SFSPTCVLKGVQDYHCDACLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCQCN 1493
Query: 108 PAGSVKNTPNCDSVKGQCESAQ 129
P+GSV NCD V G+C Q
Sbjct: 1494 PSGSVH--VNCDRVTGKCPCKQ 1513
Score = 194 (73.4 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 46/117 (39%), Positives = 59/117 (50%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
HC C +G CEKC YY Q G + C C CNP GS+++ C+ G+C CK G
Sbjct: 1456 HCDACLPGYEGQYCEKCSLGYYGDPQLPGGS-CHLCQCNPSGSVHVNCDRVTGKCPCKQG 1514
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
VTG C+ C+ H E C SC+ N G + N N DS+ S L+ G VH
Sbjct: 1515 VTGQLCEECEPRHLLLEEE-CVSCDDNCTGVLLN--NLDSLSENILSLNLT--GVVH 1566
Score = 185 (70.2 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 57/214 (26%), Positives = 82/214 (38%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 99
K + + +S + C C P G C + C PG +K V A
Sbjct: 1326 KFEEMHLGRSRAHLIEQCRC-PAGYAGFSCQN-----CAPGYYREKPKEFSVRETHTIIA 1379
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
C C+CN ++ CD G+C L+ R + + G I +
Sbjct: 1380 PCVPCQCN-----NHSETCDPETGKC----LNCRDNTVGDYCSACAPGY--YGKVIGSVN 1428
Query: 160 RCKRDTYPLGHGGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGE---AGCK 211
C P + S + C +G C C PG G C++C + +Y + C
Sbjct: 1429 DCSLCACPRANPVSFSPTCVLKGVQDYHCDACLPGYEGQYCEKCSLGYYGDPQLPGGSCH 1488
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+CNP+GSV NCD V G+C CK V G C
Sbjct: 1489 LCQCNPSGSVH--VNCDRVTGKCPCKQGVTGQLC 1520
Score = 183 (69.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 61/223 (27%), Positives = 90/223 (40%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF-----------CTACNCNPIGSLNLQCNSE-GRC- 75
C G +C+ C YY++ F C C CN + + C+ E G+C
Sbjct: 1345 CPAGYAGFSCQNCAPGYYREKPKEFSVRETHTIIAPCVPCQCN---NHSETCDPETGKCL 1401
Query: 76 QCKPGVTGDKCDRCDVNHYD--FGEAG-CKSCECNPAGSVKNTPNCDSVKG----QCESA 128
C+ GD C C +Y G C C C A V +P C +KG C++
Sbjct: 1402 NCRDNTVGDYCSACAPGYYGKVIGSVNDCSLCACPRANPVSFSPTC-VLKGVQDYHCDAC 1460
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
G+ + + + G L +C P GS+++ C+ G+C CK
Sbjct: 1461 LPGYEGQYCEKCSLGYYGDPQLPGGSC-HLCQCN----P---SGSVHVNCDRVTGKCPCK 1512
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GVTG C+ C+ H E C SC+ N G + N N DS+
Sbjct: 1513 QGVTGQLCEECEPRHLLLEEE-CVSCDDNCTGVLLN--NLDSL 1552
Score = 172 (65.6 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 58/189 (30%), Positives = 84/189 (44%)
Query: 75 CQCKPGVTGDKCDRCDVNHY--D---FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
C+C G TG C+ C +Y D FG C+ C+CN G + CD+ +G C + Q
Sbjct: 690 CECPQGYTGISCESCLPGYYRVDGILFGGI-CQPCKCN--G---HATECDT-QGVCFACQ 742
Query: 130 LSSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKRDTYPLGHGGS-LNLQCN-SEGR-- 183
++ G Q F P+ D + C PL + + C SEG
Sbjct: 743 HNTTGPFCD----QCLPGFYGSPSQGTPEDCQPC---ACPLSSAANNFSPTCQLSEGEGI 795
Query: 184 -C-QCKPGVTGDKCDRCDVNHYDF----GEAGCKSCECNPAGSVKNTPNCDSVKGQC-EC 236
C +C PG TG +C+RC +Y G++ C CECN + + CD++ GQC +C
Sbjct: 796 VCDKCLPGYTGSRCERCANGYYGNPLVPGQS-CVPCECNGNVNPQEDGYCDTITGQCLKC 854
Query: 237 KDNVEGAQC 245
N G C
Sbjct: 855 VGNTAGLHC 863
Score = 159 (61.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 59/211 (27%), Positives = 88/211 (41%)
Query: 57 CNC--NPIG-SLNLQCNSEGRCQCKPGV--TGDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
C C N G S N C + +PG G+KC++C+ ++ K+ +C +
Sbjct: 271 CQCEHNTCGESCNRCCPGYHQKPWRPGTISAGNKCEKCNCHN--------KAEDCYYNQT 322
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHT---ELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
+ + ++ GQ + HT + + F P +D C YP
Sbjct: 323 IADQKRSMNIHGQYTGGGVCLNCSQHTTGINCEMCADGYFRPQKVSPYDDHPC----YPC 378
Query: 169 GHG--GSLNLQC-------NSE-----GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G GSL+ C +S+ G+CQC+ G TG+KCDRC + G C C
Sbjct: 379 GCDPFGSLSSVCVKDERQSDSQHGTWPGQCQCRDGYTGEKCDRCAFGYR--GYPNCLRCN 436
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ GS+ P C C CK+NVEG C
Sbjct: 437 CSLIGSINEDP-CAE---PCLCKENVEGENC 463
Score = 156 (60.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 41/141 (29%), Positives = 64/141 (45%)
Query: 1 CNCNGFSNRCFFDKELYNR----------TGHGGHCLDCQGDRDGPNCEKCRDNYY--QK 48
CNC+ + C++++ + ++ TG GG CL+C G NCE C D Y+ QK
Sbjct: 308 CNCHNKAEDCYYNQTIADQKRSMNIHGQYTG-GGVCLNCSQHTTGINCEMCADGYFRPQK 366
Query: 49 SG---DNFCTACNCNPIGSLNLQC-NSEGRCQCKPGVTGDKC--------DRCDVNHYDF 96
D+ C C C+P GSL+ C E + + G +C ++CD + +
Sbjct: 367 VSPYDDHPCYPCGCDPFGSLSSVCVKDERQSDSQHGTWPGQCQCRDGYTGEKCDRCAFGY 426
Query: 97 -GEAGCKSCECNPAGSVKNTP 116
G C C C+ GS+ P
Sbjct: 427 RGYPNCLRCNCSLIGSINEDP 447
Score = 135 (52.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 55/208 (26%), Positives = 78/208 (37%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL--QCNSEGRC-QCKPGVTGDKCDRCDV 91
G CEKC N + K+ D + + S+N+ Q G C C TG C+ C
Sbjct: 302 GNKCEKC--NCHNKAEDCYYNQTIADQKRSMNIHGQYTGGGVCLNCSQHTTGINCEMCAD 359
Query: 92 NHY------DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
++ + + C C C+P GS+ + C + Q +S + G+
Sbjct: 360 GYFRPQKVSPYDDHPCYPCGCDPFGSLSSV--CVKDERQSDSQHGTWPGQCQCRDGYTGE 417
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF 205
K D C R L GS+N +E C CK V G+ CD C Y+
Sbjct: 418 K-CDRCAFGYRGYPNCLRCNCSLI--GSINEDPCAEP-CLCKENVEGENCDLCKPGFYNL 473
Query: 206 GEA---GCKSCECNPAGSVKNTPNCDSV 230
E GC C C V CDS+
Sbjct: 474 QERNPEGCTECFCFGVSDV-----CDSL 496
Score = 75 (31.5 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C C G + C D E+ + C C+ + G +C +C Y+QK S N
Sbjct: 251 CICYGHARSCPLD-EITKKL----QC-QCEHNTCGESCNRCCPGYHQKPWRPGTISAGNK 304
Query: 54 CTACNCN 60
C CNC+
Sbjct: 305 CEKCNCH 311
Score = 70 (29.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNC 59
CL C+ + +G NC+ C+ +Y Q+ CT C C
Sbjct: 452 CL-CKENVEGENCDLCKPGFYNLQERNPEGCTECFC 486
Score = 61 (26.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 178 CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGE---AGCKSCEC 215
C E G C CK V G +C C + GC C C
Sbjct: 1092 CEEETGICACKENVFGLQCSECKPGTFALSANNALGCTPCFC 1133
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 6/14 (42%), Positives = 6/14 (42%)
Query: 234 CECKDNVEGAQCRS 247
CEC G C S
Sbjct: 690 CECPQGYTGISCES 703
>MGI|MGI:99892 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005608
"laminin-3 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IDA] [GO:0009888 "tissue
development" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043256
"laminin complex" evidence=IDA] [GO:0045198 "establishment of
epithelial cell apical/basal polarity" evidence=IMP] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IMP] [GO:0061304 "retinal blood vessel
morphogenesis" evidence=IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99892 GO:GO:0030155 GO:GO:0007155
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 Reactome:REACT_127416 GO:GO:0007166
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 Pfam:PF02210 GO:GO:0045198 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
EMBL:J04064 EMBL:X07737 EMBL:X13459 EMBL:M36775 IPI:IPI00113726
PIR:A31771 RefSeq:NP_032506.2 UniGene:Mm.303386 PDB:2JD4
PDBsum:2JD4 ProteinModelPortal:P19137 SMR:P19137 MINT:MINT-2635122
STRING:P19137 PhosphoSite:P19137 PaxDb:P19137 PRIDE:P19137
GeneID:16772 KEGG:mmu:16772 UCSC:uc008dkh.1 InParanoid:P19137
EvolutionaryTrace:P19137 NextBio:290602 CleanEx:MM_LAMA1
Genevestigator:P19137 GermOnline:ENSMUSG00000032796 Uniprot:P19137
Length = 3084
Score = 316 (116.3 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 73/230 (31%), Positives = 103/230 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C DC+ G C++C YY C CNC+ GS++ C EG+C C PGV+G
Sbjct: 926 GLC-DCKPHVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSDNCTEEGQCHCGPGVSG 984
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+CDRC Y F + GC C+C +N NCD G+C ++G E +
Sbjct: 985 KQCDRCSHGFYAFQDGGCTPCDC---AHTQN--NCDPASGECLCPP-HTQGLKCEECE-E 1037
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 202
+ DP + C GS + QC+ G C CK G G C +C + +
Sbjct: 1038 AYWGLDPEQG----CQACNCSAV-----GSTSAQCDVLSGHCPCKKGFGGQSCHQCSLGY 1088
Query: 203 YDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
F + C C C+ G++ +T + C G C CK+NV G QC
Sbjct: 1089 RSFPD--CVPCGCDLRGTLPDTCDLEQGLCSCSEDSGTCSCKENVVGPQC 1136
Score = 280 (103.6 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 84/263 (31%), Positives = 122/263 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C C+G ++ C +++ G C C + G +CE+C +Y + C C
Sbjct: 749 CECHGHASEC----DIH------GICSVCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPC 798
Query: 58 NCN-PIGSLNLQ--CN-SEGR---C-QCKPGVTGDKCDRCDVNHYDFGEAGCKSC-ECNP 108
C I S N C+ ++G C QC PG +G C+RC +Y +C CN
Sbjct: 799 ACPLSIDSNNFSPTCHLTDGEEVVCDQCAPGYSGSWCERCADGYYGNPTVPGGTCVPCNC 858
Query: 109 AGSVK--NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DT 165
+G+V +CDSV G+C ++ G H E + F G+ + + C+ D
Sbjct: 859 SGNVDPLEAGHCDSVTGECLKCLWNTDG-AHCE---RCADGF--YGDAV-TAKNCRACDC 911
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVK 222
+ GSL+ C+ E G C CKP VTG +CD+C +Y D G GC C C+ GSV
Sbjct: 912 H---ENGSLSGVCHLETGLCDCKPHVTGQQCDQCLSGYYGLDTG-LGCVPCNCSVEGSVS 967
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ NC +GQC C V G QC
Sbjct: 968 D--NCTE-EGQCHCGPGVSGKQC 987
Score = 220 (82.5 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 59/213 (27%), Positives = 86/213 (40%)
Query: 10 CFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC 69
C + + + G C C G C++C +Y D CT C+C C
Sbjct: 960 CSVEGSVSDNCTEEGQC-HCGPGVSGKQCDRCSHGFYAFQ-DGGCTPCDC---AHTQNNC 1014
Query: 70 N-SEGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
+ + G C C P G KC+ C+ ++ E GC++C C+ GS + CD + G C
Sbjct: 1015 DPASGECLCPPHTQGLKCEECEEAYWGLDPEQGCQACNCSAVGST--SAQCDVLSGHCPC 1072
Query: 128 AQLSSRGRVHT-ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQ 185
+ H L +S + P G DLR DT L G C+ + G C
Sbjct: 1073 KKGFGGQSCHQCSLGYRSFPDCVPCG---CDLRGTLPDTCDLEQG---LCSCSEDSGTCS 1126
Query: 186 CKPGVTGDKCDRCDVNHYDF-GE--AGCKSCEC 215
CK V G +C +C + G+ GC C C
Sbjct: 1127 CKENVVGPQCSKCQAGTFALRGDNPQGCSPCFC 1159
Score = 215 (80.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 52/137 (37%), Positives = 66/137 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-SG-DNFCTACN 58
CNCN S+ C D E G CL C+ G +CE C YY K +G CT C
Sbjct: 1410 CNCNNHSDVC--DPET-------GKCLSCRDHTSGDHCELCASGYYGKVTGLPGDCTPCT 1460
Query: 59 C--NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNP 108
C +P S + C EG RC C PG G C+RC ++ A C++C+CNP
Sbjct: 1461 CPHHPPFSFSPTCVVEGDSDFRCNACLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNP 1520
Query: 109 AGSVKNTPNCDSVKGQC 125
GSV + +CD GQC
Sbjct: 1521 QGSVHS--DCDRASGQC 1535
Score = 207 (77.9 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 67/239 (28%), Positives = 92/239 (38%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRCQ-CKPG 80
HC +C G +CE C YY+ G F C C C+ S +C+ G C C
Sbjct: 715 HC-ECPQGYTGTSCEACLPGYYRVDGILFGGICQPCECHGHAS---ECDIHGICSVCTHN 770
Query: 81 VTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN-TPNCDSVKGQ---CESAQLSS 132
TGD C++C Y G C+ C C + N +P C G+ C+
Sbjct: 771 TTGDHCEQCLPGFYGTPSRGTPGDCQPCACPLSIDSNNFSPTCHLTDGEEVVCDQCAPGY 830
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGV 190
G N G C + PL G C+S G C +C
Sbjct: 831 SGSWCERCADGYYGNPTVPGGTCVPCN-CSGNVDPLEAG-----HCDSVTGECLKCLWNT 884
Query: 191 TGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+RC Y G+A C++C+C+ GS+ C G C+CK +V G QC
Sbjct: 885 DGAHCERCADGFY--GDAVTAKNCRACDCHENGSLSGV--CHLETGLCDCKPHVTGQQC 939
Score = 199 (75.1 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 52/183 (28%), Positives = 75/183 (40%)
Query: 75 CQCKPGVTGDKCDRCDVNHY--DFGEAGCKS-----CECNPAGSVKNTPNCDSVKGQCES 127
C C PG G C C +Y E+G + C P ++ CD G+C S
Sbjct: 1369 CVCPPGTAGHSCQDCAPGYYREKLPESGGRGPRPLLAPCVPCNCNNHSDVCDPETGKCLS 1428
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP-LGHGGSLNLQCNSEGRCQ- 185
+ + G H EL + D C +P + ++ +S+ RC
Sbjct: 1429 CRDHTSGD-HCELCASGY--YGKVTGLPGDCTPCTCPHHPPFSFSPTCVVEGDSDFRCNA 1485
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C PG G C+RC ++ A C++C+CNP GSV + +CD GQC CK G
Sbjct: 1486 CLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQGSVHS--DCDRASGQCVCKPGATG 1543
Query: 243 AQC 245
C
Sbjct: 1544 LHC 1546
Score = 179 (68.1 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 67/238 (28%), Positives = 98/238 (41%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQK----SGDNF-------CTACNCNPIGSLNLQCNSE-G 73
C+ C G +C+ C YY++ SG C CNCN + C+ E G
Sbjct: 1369 CV-CPPGTAGHSCQDCAPGYYREKLPESGGRGPRPLLAPCVPCNCNNHSDV---CDPETG 1424
Query: 74 RC-QCKPGVTGDKCDRCDVNHYD--FGEAG-CKSCECNPAGSVKNTPNCDSVKG----QC 125
+C C+ +GD C+ C +Y G G C C C +P C V+G +C
Sbjct: 1425 KCLSCRDHTSGDHCELCASGYYGKVTGLPGDCTPCTCPHHPPFSFSPTC-VVEGDSDFRC 1483
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRC 184
+ G+ N AG + C D P G S++ C+ + G+C
Sbjct: 1484 NACLPGYEGQYCERCSAGYHGNPRAAGG---SCQTC--DCNPQG---SVHSDCDRASGQC 1535
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
CKPG TG C++C H E+ C SC+ + G + N + DSV G N+ G
Sbjct: 1536 VCKPGATGLHCEKCLPRHI-LMESDCVSCDDDCVGPLLN--DLDSV-GDAVLSLNLTG 1589
Score = 174 (66.3 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 44/141 (31%), Positives = 63/141 (44%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKS-- 49
CNC+ + C++D + N G GG C++C + G NCE C D YY+
Sbjct: 334 CNCHNKAKDCYYDSSVAKERRSLNTAGQYSGGGVCVNCSQNTTGINCETCIDQYYRPHKV 393
Query: 50 ---GDNFCTACNCNPIGSLNLQCNSEGRC----------QCKPGVTGDKCDRCDVNHYDF 96
D+ C CNC+P+GSL+ C + R QC P G D+CD + +
Sbjct: 394 SPYDDHPCRPCNCDPVGSLSSVCIKDDRHADLANGKWPGQC-PCRKGYAGDKCDRCQFGY 452
Query: 97 -GEAGCKSCECNPAGSVKNTP 116
G C C+C GS+ P
Sbjct: 453 RGFPNCIPCDCRTVGSLNEDP 473
Score = 154 (59.3 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 63/233 (27%), Positives = 86/233 (36%)
Query: 24 GHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
GH C D + + +C N +S D C + P + +E C C
Sbjct: 281 GHASSCPWDEEAKQLQCQCEHNTCGESCDRCCPGYHQQPWRPGTISSGNECEECNCH--- 337
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN---TPNCD-SVKG-QCESAQLSSRGRV 136
+K C +YD A + N AG NC + G CE+ + R
Sbjct: 338 --NKAKDC---YYDSSVAKERR-SLNTAGQYSGGGVCVNCSQNTTGINCETC-IDQYYRP 390
Query: 137 HTELRVQSRK----NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
H N DP G+ + + C +D H N + G+C C+ G G
Sbjct: 391 HKVSPYDDHPCRPCNCDPVGS-LSSV--CIKDDR---HADLANGKW--PGQCPCRKGYAG 442
Query: 193 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
DKCDRC + F C C+C GS+ P C C CK NVEG C
Sbjct: 443 DKCDRCQFGYRGF--PNCIPCDCRTVGSLNEDP-CIE---PCLCKKNVEGKNC 489
Score = 140 (54.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 62/229 (27%), Positives = 90/229 (39%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL--QCNSEGRC-QCKPGVTGDKCDRCDV 91
G CE+C N + K+ D + + SLN Q + G C C TG C+ C
Sbjct: 328 GNECEEC--NCHNKAKDCYYDSSVAKERRSLNTAGQYSGGGVCVNCSQNTTGINCETCID 385
Query: 92 NHY------DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
+Y + + C+ C C+P GS+ + C +K A L++ G+ + R
Sbjct: 386 QYYRPHKVSPYDDHPCRPCNCDPVGSLSSV--C--IKDD-RHADLAN-GKWPGQC--PCR 437
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR---------CQCKPGVTGDKCD 196
K + AG++ D RC+ Y G + C + G C CK V G CD
Sbjct: 438 KGY--AGDKC-D--RCQFG-YR-GFPNCIPCDCRTVGSLNEDPCIEPCLCKKNVEGKNCD 490
Query: 197 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
RC Y+ E GC C C V CDS+ N+ G
Sbjct: 491 RCKPGFYNLKERNPEGCSECFCFGVSGV-----CDSLTWSISQVTNMSG 534
Score = 78 (32.5 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTAC 57
C+ G + C ++ L + + G C C+ + GP C KC+ + GDN C+ C
Sbjct: 1099 CDLRGTLPDTCDLEQGLCSCSEDSGTC-SCKENVVGPQCSKCQAGTFALRGDNPQGCSPC 1157
Query: 58 NCNPIGSL 65
C + L
Sbjct: 1158 FCFGLSQL 1165
Score = 66 (28.3 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNC 59
CL C+ + +G NC++C+ +Y N C+ C C
Sbjct: 478 CL-CKKNVEGKNCDRCKPGFYNLKERNPEGCSECFC 512
Score = 36 (17.7 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 5/14 (35%), Positives = 6/14 (42%)
Query: 234 CECKDNVEGAQCRS 247
CEC G C +
Sbjct: 716 CECPQGYTGTSCEA 729
>FB|FBgn0261563 [details] [associations]
symbol:wb "wing blister" species:7227 "Drosophila
melanogaster" [GO:0005605 "basal lamina" evidence=ISS;NAS;IDA]
[GO:0005604 "basement membrane" evidence=ISS] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007502 "digestive tract mesoderm development" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0008406
EMBL:AE014134 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007476 Pfam:PF02210 HSSP:P00740 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GO:GO:0007502 GO:GO:0005606 FlyBase:FBgn0261563
ChiTaRS:wb RefSeq:NP_723870.1 ProteinModelPortal:Q8IP51 SMR:Q8IP51
STRING:Q8IP51 PRIDE:Q8IP51 EnsemblMetazoa:FBtr0302731 GeneID:43946
KEGG:dme:Dmel_CG42677 UCSC:CG15288-RB CTD:43946 InParanoid:Q8IP51
OMA:CNCNAYG GenomeRNAi:43946 NextBio:836431 ArrayExpress:Q8IP51
Bgee:Q8IP51 Uniprot:Q8IP51
Length = 3375
Score = 316 (116.3 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 75/228 (32%), Positives = 107/228 (46%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C C + G C+KCR ++ + C C C+P GS +CN G+C CK GV
Sbjct: 1167 GQCA-CLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIGVG 1225
Query: 83 GDKCDRCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G C+ C + F GC+ C C G V CD G+C + + RG +
Sbjct: 1226 GQHCNECTEGFFGFSTEGCQRCSACRSEGQV-----CDPHNGRCICPKFT-RGLGCGQC- 1278
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
V + R+ R C+ D H GS+ QC++ +G+CQC+ G +G KCD C +
Sbjct: 1279 VPGTWGWQA---RL-GCRECECD-----HIGSIGQQCSTGDGQCQCREGYSGRKCDTCAI 1329
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPN---CDSVKGQCECKDNVEGAQC 245
++ + E C+ C C+ GS CDS GQC CK V G +C
Sbjct: 1330 GYFGYPE--CRRCGCDAEGSFTQADGSIACDS-NGQCPCKSLVVGLKC 1374
Score = 277 (102.6 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 91/272 (33%), Positives = 123/272 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK--SGD-NFCTAC 57
C CNG SN C +L + G+C DC + G CE+C+ YY G N C C
Sbjct: 852 CPCNGHSNSC----DLQS-----GNCGDCMHNTFGDRCERCQLGYYGNPLQGTPNDCKRC 902
Query: 58 NC---------NP---IGSLN-LQCN--------SEGRC-QCKPGVTGDKCDRCDVNHYD 95
C +P + S N + N +E C QC G TGD C CD ++
Sbjct: 903 ACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFG 962
Query: 96 FGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
SC+ C+ AG P C+ G+C + + ++ G H E R + DPA
Sbjct: 963 NPRQPGSSCQRCDCAGG----P-CNVTTGECITCRGNTEGW-HCE-RCKLGYWGDPAVG- 1014
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
D C + GS + C+S +G+C CKP G KCD CDV + + E C SC
Sbjct: 1015 -CDPCHCHTE-------GSESGLCDSTDGQCLCKPRYAGQKCDECDVGYANV-ELRCPSC 1065
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+P GS+ CD GQC CK+ V GA+C
Sbjct: 1066 NCDPLGSLVQD-RCDPHTGQCHCKEGVMGAKC 1096
Score = 247 (92.0 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 59/197 (29%), Positives = 92/197 (46%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF--GEAGCKSCECNPAG 110
C C+C+ +GSL+ C+ G+C C VTG +CD+C H++ GE GC+ C C+P G
Sbjct: 1147 CEECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGE-GCRDCRCDPHG 1205
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
S + C+ GQC+ ++ G+ H + F G C+R +
Sbjct: 1206 SRGH--ECNPWTGQCD-CKIGVGGQ-HCNECTEGFFGFSTEG--------CQRCSACRSE 1253
Query: 171 GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCD 228
G C+ GRC C G C +C + + GC+ CEC+ GS+ C
Sbjct: 1254 GQV----CDPHNGRCICPKFTRGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQ--QCS 1307
Query: 229 SVKGQCECKDNVEGAQC 245
+ GQC+C++ G +C
Sbjct: 1308 TGDGQCQCREGYSGRKC 1324
Score = 196 (74.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 45/135 (33%), Positives = 65/135 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C+CNG S+ C D+E G C +C+G+ G +C +C + +Y + + C AC C
Sbjct: 1670 CHCNGRSSDC--DRET-------GVCQNCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPC 1720
Query: 60 NPIGSLNLQ--CN---SEGRCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAG 110
P + N CN E C CKPG TG C+RC ++ + C+ C C+P G
Sbjct: 1721 -PETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDG 1779
Query: 111 SVKNTPNCDSVKGQC 125
T CD G+C
Sbjct: 1780 I--QTEGCDVETGRC 1792
Score = 186 (70.5 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 43/130 (33%), Positives = 59/130 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C G + C +D L G C C + G CE C +Y++ C C
Sbjct: 452 CQCYGHAESCTYDPFLDK-----GICQSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPC 506
Query: 58 NCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
+CNP S C S+G C C G G C+ C +Y G+ CK CEC+ GS+ +T
Sbjct: 507 SCNPARSTG-GCQSDGGSCNCLEGFQGKNCEECAPGYY--GD-DCKRCECDERGSLGSTG 562
Query: 117 NCDSVKGQCE 126
+C V QC+
Sbjct: 563 SCSGVC-QCK 571
Score = 184 (69.8 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 74/251 (29%), Positives = 102/251 (40%)
Query: 2 NCNGFSNRCFF--DKELYNRTGHGGHCLDCQGDRDGPNCEKC----RDNYYQKSGDNFCT 55
+CNG +NR D L C+ CQ + G CE+C +D YQ G+ C
Sbjct: 401 DCNGHANRSHESPDDPLMQ-------CI-CQHNTCGAQCEQCCPLFQDRPYQMGGE--CE 450
Query: 56 ACNCNPIGSLNLQCN-----SEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG----CKSCE 105
C C G C +G CQ C G +C+ C++ Y +A C C
Sbjct: 451 ICQC--YGHAE-SCTYDPFLDKGICQSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPCS 507
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
CNPA ++T C S G C + +G+ + E + + G+ D +RC+ D
Sbjct: 508 CNPA---RSTGGCQSDGGSCNCLE-GFQGK-NCE---ECAPGY--YGD---DCKRCECD- 553
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVK 222
GSL + G CQCK V G C C ++D GC SC C+ V
Sbjct: 554 ----ERGSLGSTGSCSGVCQCKLNVEGSTCSECAPGYFDLSAENAEGCTSCWCS---GVS 606
Query: 223 NTPNCDSVKGQ 233
T C S K Q
Sbjct: 607 QT--CHSAKLQ 615
Score = 180 (68.4 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 55/198 (27%), Positives = 83/198 (41%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN-CNPIGSLNLQCNSE-GRCQCKPGV 81
G C DC+ G +C +C + ++ S + C C+ C G + C+ GRC C
Sbjct: 1216 GQC-DCKIGVGGQHCNECTEGFFGFSTEG-CQRCSACRSEGQV---CDPHNGRCICPKFT 1270
Query: 82 TGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G C +C + + GC+ CEC+ GS+ C + GQC+ + S GR
Sbjct: 1271 RGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQ--QCSTGDGQCQCREGYS-GRKCDTC 1327
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
+ + P + RRC D ++ C+S G+C CK V G KCD C
Sbjct: 1328 AI-GYFGY-P------ECRRCGCDAEGSFTQADGSIACDSNGQCPCKSLVVGLKCDTCMQ 1379
Query: 201 NHYDFGEA---GCKSCEC 215
+ + GC C C
Sbjct: 1380 STFGLSAQNPEGCTRCFC 1397
Score = 180 (68.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 65/224 (29%), Positives = 94/224 (41%)
Query: 34 DGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG----RCQCKPGVTGDKCDRC 89
D P+ EK ++Y S +CN G N S +C C+ G +C++C
Sbjct: 379 DSPSLEK--HSFYSLSQLKVSARLDCN--GHANRSHESPDDPLMQCICQHNTCGAQCEQC 434
Query: 90 ----DVNHYDFGEAGCKSCEC-NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL-RVQ 143
Y G C+ C+C A S P D KG C+S ++ G + E +
Sbjct: 435 CPLFQDRPYQMG-GECEICQCYGHAESCTYDPFLD--KGICQSCSNNTAG-IECEFCEMG 490
Query: 144 SRKNFDPAGNRIWD-LRRCKRDTYPLGHGGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 201
+ D + D C + P G C S+G C C G G C+ C
Sbjct: 491 FYRELDAP---LTDPCLPCSCN--PARSTGG----CQSDGGSCNCLEGFQGKNCEECAPG 541
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+Y G+ CK CEC+ GS+ +T +C V C+CK NVEG+ C
Sbjct: 542 YY--GD-DCKRCECDERGSLGSTGSCSGV---CQCKLNVEGSTC 579
Score = 176 (67.0 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 54/185 (29%), Positives = 76/185 (41%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACNCNPIGSLNLQCN-SEGRC-QCKPGV 81
C C G +C+ C D Y+ + + C C+C G CN + G C C+
Sbjct: 941 CTQCPEGYTGDHCQVCDDGYFGNPRQPGSSCQRCDC--AGG---PCNVTTGECITCRGNT 995
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G C+RC + ++ GC C C+ GS CDS GQC + G+ E
Sbjct: 996 EGWHCERCKLGYWGDPAVGCDPCHCHTEGSESGL--CDSTDGQC-LCKPRYAGQKCDECD 1052
Query: 142 VQSRKNFDPAGNRIWDLR--RCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
V G +LR C D PLG + +C+ G+C CK GV G KC C
Sbjct: 1053 V---------GYANVELRCPSCNCD--PLG--SLVQDRCDPHTGQCHCKEGVMGAKCHEC 1099
Query: 199 DVNHY 203
++
Sbjct: 1100 QDGYF 1104
Score = 163 (62.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 42/161 (26%), Positives = 70/161 (43%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
C+ C+ G CE+C+ Y+ + + C CNC+P G C+ E GRC C+ GV
Sbjct: 1740 CV-CKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRCYCREGV 1798
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
TG KCD+C + + GCK C+ C + ++ + L+ + +L
Sbjct: 1799 TGLKCDKCQAERHHLVDNGCKICDNCTLLLLDYMELVGNKLRRGMHNMDLTGIPAPYRKL 1858
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE 181
+ ++ R WD + KR L L+ ++E
Sbjct: 1859 S-EYESAYEKWNGRHWDFSQTKRRLQDYDSADILKLEAHAE 1898
Score = 158 (60.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 50/164 (30%), Positives = 72/164 (43%)
Query: 57 CNCNPIGSLNLQCNSE-GRCQ-CKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSV 112
C+CN S C+ E G CQ C+ GD C +C Y + GC++C C P +
Sbjct: 1670 CHCNGRSS---DCDRETGVCQNCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPC-PETNR 1725
Query: 113 KNTPNCDSVKGQCESA-QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
C+ G+ + GR+ E R Q+ DP + C + +P
Sbjct: 1726 NFARGCNVWDGEVSCVCKPGYTGRL-CE-RCQAGYFGDPMRYPNTTCQPC--NCHP---D 1778
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 214
G C+ E GRC C+ GVTG KCD+C + + GCK C+
Sbjct: 1779 GIQTEGCDVETGRCYCREGVTGLKCDKCQAERHHLVDNGCKICD 1822
Score = 155 (59.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 40/113 (35%), Positives = 50/113 (44%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
GG C +C G NCE+C YY GD+ C C C+ GSL + G CQCK V
Sbjct: 521 GGSC-NCLEGFQGKNCEECAPGYY---GDD-CKRCECDERGSLGSTGSCSGVCQCKLNVE 575
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
G C C ++D GC SC C+ V T C SA+L +
Sbjct: 576 GSTCSECAPGYFDLSAENAEGCTSCWCS---GVSQT---------CHSAKLQT 616
Score = 152 (58.6 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 41/148 (27%), Positives = 60/148 (40%)
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIWDLRRC 161
C CN S +CD G C++ + + G H Q + F DP C
Sbjct: 1670 CHCNGRSS-----DCDRETGVCQNCR-GNTGGDHCH---QCAEGFYGDPNSPHGCQACPC 1720
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNP 217
G ++ + E C CKPG TG C+RC ++ + C+ C C+P
Sbjct: 1721 PETNRNFARGCNV---WDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHP 1777
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G T CD G+C C++ V G +C
Sbjct: 1778 DGI--QTEGCDVETGRCYCREGVTGLKC 1803
Score = 128 (50.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 39/117 (33%), Positives = 52/117 (44%)
Query: 20 TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL-----NLQCNSEGR 74
TG G C C+ G C+ C Y+ G C C C+ GS ++ C+S G+
Sbjct: 1308 TGDG-QC-QCREGYSGRKCDTCAIGYF---GYPECRRCGCDAEGSFTQADGSIACDSNGQ 1362
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C CK V G KCD C + FG S + NP G + C G+CE + LS
Sbjct: 1363 CPCKSLVVGLKCDTCMQS--TFG----LSAQ-NPEGCTRCF--CFGRSGECEQSDLS 1410
Score = 45 (20.9 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 204 DFGEAGCKSCECNPAGSVKNTPNCDSVKG--QCECKDNVEGAQCR 246
DF E ++ + A +K + N + KG +C+C +G C+
Sbjct: 1597 DFQEVVLQNVHMDAAIYIKGSTNLIA-KGVERCKCPKRFDGLSCQ 1640
Score = 41 (19.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 137 HTE-LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
H E L+ QSRK G R + ++ + D H L
Sbjct: 1896 HAENLKFQSRKAVATIGKREFAIKSMREDAVTQQHSVGL 1934
>UNIPROTKB|F1NZZ2 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0007229 "integrin-mediated signaling pathway" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IEA] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007229 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0090002 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:LRHTTGP GO:GO:0043259 EMBL:AADN02019242
EMBL:AADN02019240 EMBL:AADN02019241 IPI:IPI00578246
Ensembl:ENSGALT00000008535 Uniprot:F1NZZ2
Length = 3668
Score = 312 (114.9 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 82/264 (31%), Positives = 130/264 (49%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNF--CTAC 57
C+CNG S++C G G CL+CQ + +G +CE+C+D Y ++ D C C
Sbjct: 1841 CHCNGHSDQCL--------PG-SGICLNCQHNTEGDHCEQCKDGYVGSRNADGSLQCVGC 1891
Query: 58 NCN-PIGSLN--LQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECN 107
C + S N + C +G +C CKPG G C+RC +Y G + C+ C+C+
Sbjct: 1892 PCPLSVASNNFAIGCVHKGSSTQCLCKPGYAGPNCERCAPGYYGNPLVIGSS-CQPCDCS 1950
Query: 108 PAGSVKNT--PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-D 164
+ N +CDS+ G C + G V E+ F G+ + + C + +
Sbjct: 1951 -GNTDPNMLFSSCDSLTGTCMGCMHHTAG-VRCEV---CAPGF--YGDAV-AAKNCTQCN 2002
Query: 165 TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVK 222
P G C+ + G+C CK GVTG CD C+ +Y F G +GC+ C+C+ G++
Sbjct: 2003 CSPCGTDS-----CHPQTGQCFCKAGVTGQHCDHCEEGYYGFEGCSGCRRCDCD-VGAMG 2056
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
++ C + GQC C V G++C+
Sbjct: 2057 SS--CHAQTGQCHCLPGVSGSRCQ 2078
Score = 278 (102.9 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 72/236 (30%), Positives = 103/236 (43%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNCNPIGSLNL---QCNS-EG 73
G CL C+ GPNCE+C YY G + C C+C+ N+ C+S G
Sbjct: 1910 GSSTQCL-CKPGYAGPNCERCAPGYYGNPLVIGSS-CQPCDCSGNTDPNMLFSSCDSLTG 1967
Query: 74 RCQ-CKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C C G +C+ C Y A C C C+P G T +C GQC +
Sbjct: 1968 TCMGCMHHTAGVRCEVCAPGFYGDAVAAKNCTQCNCSPCG----TDSCHPQTGQC-FCKA 2022
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPG 189
G+ H + + F+ RRC D G++ C+++ G+C C PG
Sbjct: 2023 GVTGQ-HCDHCEEGYYGFEGCSG----CRRCDCDV------GAMGSSCHAQTGQCHCLPG 2071
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V+G +C +C ++ F E GC+ CEC GS CD G+C C + + G QC
Sbjct: 2072 VSGSRCQQCAPGYWGFSERGCRKCECR-GGS------CDPRTGECTCSNGLTGKQC 2120
Score = 278 (102.9 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 72/232 (31%), Positives = 98/232 (42%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQ 76
N G C C + G C +C +Y G CT C C+ GSL+ CN E G+C
Sbjct: 625 NNCSPAGQCR-CHVNFTGHTCNQCALGFY---GYPSCTPCQCSREGSLHSTCNQETGQCS 680
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
C+P VTG +CD C Y F C+ CNPAG V P+ G C + + G
Sbjct: 681 CRPKVTGLRCDSCVPGAYGFPH--CEVGSCNPAGLVTADPSL--APGSC-ACRAYVEGPA 735
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
+ N P + + CK +T G + Q N G+C CKP G C
Sbjct: 736 CDRCK-PLYWNLTP--DNPYGCTSCKCETKGTISGIAECQQGN--GQCFCKPNTCGQFCS 790
Query: 197 RCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C ++ GC+ C C+ GS+ P+C+ G C C+ N G C
Sbjct: 791 ACKDGYFSMENTNYFGCQGCRCDVGGSLG--PSCEERSGACRCRQNTRGPTC 840
Score = 269 (99.8 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 84/274 (30%), Positives = 114/274 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
CNCNG + C++D E+ GG C+DCQ G NCE+C YY +S D
Sbjct: 341 CNCNGHAYDCYYDPEVDRHKASKSREDKFEGGGVCIDCQHHTTGVNCERCIPGYY-RSPD 399
Query: 52 N------FCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKS 103
+ C CNC + C GRC CKP TG+ C+ C + DF +
Sbjct: 400 HPIDSPYICYRCNCKS-DFTDGTCEDLTGRCYCKPNYTGEHCNACAEGYLDFPHCYPVPA 458
Query: 104 CECNPAGS----VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
N G NCD G E RV + + NF G D
Sbjct: 459 FAYNDTGEQVLPAGQIINCDCYAGGTEGNACRKDPRVGMCV---CKPNFQ--GTHC-D-- 510
Query: 160 RCKRDTY-PLGH-----G-GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
+C Y PL G G + C+SE G+C C+ G G CDRC ++++ C+
Sbjct: 511 QCTPGHYGPLCQPCQCSGPGQYDGTCDSETGQCLCRTGFEGQLCDRCAPGYFNYPL--CQ 568
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C+ G++ CDS G+C CK G +C
Sbjct: 569 LCGCSAVGTLPG--GCDS-SGRCFCKAEFAGPRC 599
Score = 239 (89.2 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 59/196 (30%), Positives = 89/196 (45%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C AC+C+ G+++ C+ G+C+C TG C++C + Y G C C+C+ GS+
Sbjct: 612 CYACSCDSRGAVDNNCSPAGQCRCHVNFTGHTCNQCALGFY--GYPSCTPCQCSREGSLH 669
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
+T C+ GQC S R +V T LR S P + C+ + G
Sbjct: 670 ST--CNQETGQC-----SCRPKV-TGLRCDSCV---PGA---YGFPHCEVGS--CNPAGL 713
Query: 174 LNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDS 229
+ + + G C C+ V G CDRC +++ GC SC+C G++ C
Sbjct: 714 VTADPSLAPGSCACRAYVEGPACDRCKPLYWNLTPDNPYGCTSCKCETKGTISGIAECQQ 773
Query: 230 VKGQCECKDNVEGAQC 245
GQC CK N G C
Sbjct: 774 GNGQCFCKPNTCGQFC 789
Score = 207 (77.9 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 42/126 (33%), Positives = 66/126 (52%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+ C D + +TG C C+ G +C+ C + YY G + C C+C+
Sbjct: 2001 CNCSP----CGTDS-CHPQTGQ---CF-CKAGVTGQHCDHCEEGYYGFEGCSGCRRCDCD 2051
Query: 61 PIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
+G++ C+++ G+C C PGV+G +C +C ++ F E GC+ CEC GS CD
Sbjct: 2052 -VGAMGSSCHAQTGQCHCLPGVSGSRCQQCAPGYWGFSERGCRKCECR-GGS------CD 2103
Query: 120 SVKGQC 125
G+C
Sbjct: 2104 PRTGEC 2109
Score = 198 (74.8 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 74/268 (27%), Positives = 110/268 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C C+G +D + TG CL C+ +G C++C Y+ C C C+
Sbjct: 524 CQCSGPGQ---YDGTCDSETGQ---CL-CRTGFEGQLCDRCAPGYFNYP---LCQLCGCS 573
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
+G+L C+S GRC CK G +C++C H+ + C +C C+ G+V N NC S
Sbjct: 574 AVGTLPGGCDSSGRCFCKAEFAGPRCEQCSSGHHSYPH--CYACSCDSRGAVDN--NC-S 628
Query: 121 VKGQCESAQLSSRGRVHTE--LRVQSRKNFDPAG-NRIWDLRR-CKRDTYPLGHGGSLN- 175
GQC ++ G + L + P +R L C ++T +
Sbjct: 629 PAGQCR-CHVNFTGHTCNQCALGFYGYPSCTPCQCSREGSLHSTCNQETGQCSCRPKVTG 687
Query: 176 LQCNS--EG-----RCQ---CKPG--VTGDKC---DRCDVNHYDFGEAGCKSCECNPAGS 220
L+C+S G C+ C P VT D C Y G A C C+
Sbjct: 688 LRCDSCVPGAYGFPHCEVGSCNPAGLVTADPSLAPGSCACRAYVEGPA-CDRCKPLYWNL 746
Query: 221 VKNTP-NCDSVKGQCECKDNVEG-AQCR 246
+ P C S K CE K + G A+C+
Sbjct: 747 TPDNPYGCTSCK--CETKGTISGIAECQ 772
Score = 179 (68.1 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 176 LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
L C+ + G+C+CKP V G +CD C +Y + C+ C+C+P G+ + CD V GQC
Sbjct: 1522 LGCDVDSGQCKCKPNVIGRRCDLCAPGYYHY--PSCRRCDCHPDGTEVSV--CDPVTGQC 1577
Query: 235 ECKDNVEGAQC 245
CK+NVEG +C
Sbjct: 1578 HCKENVEGPRC 1588
Score = 177 (67.4 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 48/185 (25%), Positives = 74/185 (40%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G C C+ G C+ C Y G C +CNP G + + + G C C+ V
Sbjct: 677 GQC-SCRPKVTGLRCDSCVPGAY---GFPHCEVGSCNPAGLVTADPSLAPGSCACRAYVE 732
Query: 83 GDKCDRCDVNHYDF---GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G CDRC +++ GC SC+C G++ C GQC + ++ G+ +
Sbjct: 733 GPACDRCKPLYWNLTPDNPYGCTSCKCETKGTISGIAECQQGNGQC-FCKPNTCGQFCSA 791
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRC 198
+ F + + C+ D GGSL C G C+C+ G C +
Sbjct: 792 CK---DGYFSMENTNYFGCQGCRCDV-----GGSLGPSCEERSGACRCRQNTRGPTCTQP 843
Query: 199 DVNHY 203
+HY
Sbjct: 844 VRDHY 848
Score = 165 (63.1 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 63/219 (28%), Positives = 95/219 (43%)
Query: 56 ACNCNP-IGSLNLQCNSEG-RC-QCKPGVTGDKCDRCDVN---HYD------FGEAGCKS 103
AC +P +G + N +G C QC PG G C C + YD G+ C++
Sbjct: 488 ACRKDPRVGMCVCKPNFQGTHCDQCTPGHYGPLCQPCQCSGPGQYDGTCDSETGQCLCRT 547
Query: 104 ------CE-CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW 156
C+ C P N P C + G C SA + G + R + F AG R
Sbjct: 548 GFEGQLCDRCAPG--YFNYPLCQ-LCG-C-SAVGTLPGGCDSSGRCFCKAEF--AGPRC- 599
Query: 157 DLRRCK--RDTYPLGHG------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
+C +YP + G+++ C+ G+C+C TG C++C + Y G
Sbjct: 600 --EQCSSGHHSYPHCYACSCDSRGAVDNNCSPAGQCRCHVNFTGHTCNQCALGFY--GYP 655
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C C+C+ GS+ +T C+ GQC C+ V G +C S
Sbjct: 656 SCTPCQCSREGSLHST--CNQETGQCSCRPKVTGLRCDS 692
Score = 159 (61.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 35/106 (33%), Positives = 50/106 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ---CNSE-GRCQCKP 79
G C+ C P C C + C CNC+ G L C+ + G+C+CKP
Sbjct: 1477 GQCI-CPPHTLKPECVVCEPQTFGCHPLIGCEDCNCSQPGVQELTELGCDVDSGQCKCKP 1535
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
V G +CD C +Y + C+ C+C+P G+ + CD V GQC
Sbjct: 1536 NVIGRRCDLCAPGYYHY--PSCRRCDCHPDGTEVSV--CDPVTGQC 1577
Score = 148 (57.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 51/186 (27%), Positives = 77/186 (41%)
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA---G-CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C C GD C C +Y + G C C CN G ++ C G C + Q
Sbjct: 1808 CFCPANYLGDSCQECAPGYYRDTKGLFLGKCIPCHCN--G---HSDQCLPGSGICLNCQH 1862
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-HGGSLNLQCNSEG---RCQC 186
++ G H E Q + + + N L+ C PL + + C +G +C C
Sbjct: 1863 NTEGD-HCE---QCKDGYVGSRNADGSLQ-CVGCPCPLSVASNNFAIGCVHKGSSTQCLC 1917
Query: 187 KPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNT--PNCDSVKGQCE-CKDN 239
KPG G C+RC +Y G + C+ C+C+ + N +CDS+ G C C +
Sbjct: 1918 KPGYAGPNCERCAPGYYGNPLVIGSS-CQPCDCS-GNTDPNMLFSSCDSLTGTCMGCMHH 1975
Query: 240 VEGAQC 245
G +C
Sbjct: 1976 TAGVRC 1981
Score = 132 (51.5 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G C C+ + G C+ C YY C C+C+P G+ C+ G+C CK V
Sbjct: 1529 GQC-KCKPNVIGRRCDLCAPGYYHYPS---CRRCDCHPDGTEVSVCDPVTGQCHCKENVE 1584
Query: 83 GDKCDRCDVNHYDFGEA---GCKSCEC 106
G +CD+C + + + GC C C
Sbjct: 1585 GPRCDQCRLGTFSLDASNPKGCTKCFC 1611
Score = 131 (51.2 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 30/88 (34%), Positives = 40/88 (45%)
Query: 41 CRDNYYQKS--GDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFG 97
CRD+ S +N C C+ G+ QC G+C CK V G +C RC ++ F
Sbjct: 1401 CRDSAISLSLFYNNGAQPCQCHEAGARGSQCEPFGGQCPCKSNVIGRECSRCATGYWGF- 1459
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQC 125
C+ C+C T CD V GQC
Sbjct: 1460 -PNCRPCDCG-------TRLCDEVTGQC 1479
Score = 116 (45.9 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 25/75 (33%), Positives = 34/75 (45%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
G+ QC G+C CK V G +C RC ++ F C+ C+C T CD V
Sbjct: 1425 GARGSQCEPFGGQCPCKSNVIGRECSRCATGYWGF--PNCRPCDCG-------TRLCDEV 1475
Query: 231 KGQCECKDNVEGAQC 245
GQC C + +C
Sbjct: 1476 TGQCICPPHTLKPEC 1490
Score = 114 (45.2 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP-NCDSVKGQCECKDN 239
G+C C P +C C+ + GC+ C C+ G + T CD GQC+CK N
Sbjct: 1477 GQCICPPHTLKPECVVCEPQTFGCHPLIGCEDCNCSQPGVQELTELGCDVDSGQCKCKPN 1536
Query: 240 VEGAQC 245
V G +C
Sbjct: 1537 VIGRRC 1542
Score = 87 (35.7 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 205 FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F G + C+C+ AG+ C+ GQC CK NV G +C
Sbjct: 1411 FYNNGAQPCQCHEAGA--RGSQCEPFGGQCPCKSNVIGREC 1449
Score = 73 (30.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSLNLQCNS 71
G C C+ + +GP C++CR + N CT C C G+ N +C S
Sbjct: 1575 GQC-HCKENVEGPRCDQCRLGTFSLDASNPKGCTKCFC--FGATN-RCRS 1620
Score = 64 (27.6 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGD--NF 53
C C+G ++ C D + + + C DCQ + G +C++C + Q + D N
Sbjct: 282 CVCHGHADVC--DAKDPSDP-YRLQC-DCQHNTCGGSCDRCCPGFNQFPWKPATADSANE 337
Query: 54 CTACNCN 60
C CNCN
Sbjct: 338 CQPCNCN 344
Score = 63 (27.2 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 74 RCQCKPGVTGDKCDRC--DVNHYDFGEAGCKSC-ECNPAGSVKNTPNC 118
+C C+ G CDRC N + + A S EC P + +C
Sbjct: 303 QCDCQHNTCGGSCDRCCPGFNQFPWKPATADSANECQPCNCNGHAYDC 350
Score = 37 (18.1 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 1 CNCNGFSNRC 10
C C G +NRC
Sbjct: 1609 CFCFGATNRC 1618
Score = 37 (18.1 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCK 162
R T+L + A N++ DLRR K
Sbjct: 2554 REQTKLNGAIKGTLQTAKNKLADLRRKK 2581
>UNIPROTKB|F1SQR3 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060668 "regulation of branching involved in salivary
gland morphogenesis by extracellular matrix-epithelial cell
signaling" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 EMBL:CU442719 RefSeq:XP_003481795.1
Ensembl:ENSSSCT00000000980 GeneID:100516554 KEGG:ssc:100516554
Uniprot:F1SQR3
Length = 628
Score = 285 (105.4 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 56/142 (39%), Positives = 81/142 (57%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQ------CN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L C+ S G C CKPGV G CDRC V ++ FGE GC+ C+C
Sbjct: 392 CKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGEYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCTSS 465
Score = 153 (58.9 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 50/147 (34%), Positives = 67/147 (45%)
Query: 101 CKSCECNP-AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
C++C+CN A + N G S + + + +TE Q + P R DLR
Sbjct: 329 CRTCKCNGHADACHFDINVWEASGN-RSGGVCNDCQHNTE--GQHCQRCKPGFYR--DLR 383
Query: 160 R-------CKR-DTYPLGHG----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
R CK +P+G S+ S G C CKPGV G CDRC V ++ FGE
Sbjct: 384 RPFSAPDACKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGE 443
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQC 234
GC+ C+C AGS CD + G C
Sbjct: 444 YGCRPCDC--AGS------CDPLTGDC 462
Score = 110 (43.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 32/82 (39%), Positives = 37/82 (45%)
Query: 171 GGSLN-LQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV----KN 223
GG N Q N+EG+ CQ CKPG D R + D CK C C+P GS +
Sbjct: 356 GGVCNDCQHNTEGQHCQRCKPGFYRDL--RRPFSAPD----ACKLCSCHPVGSAVLPFSS 409
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD G C CK V G C
Sbjct: 410 VTFCDPSNGDCPCKPGVAGPHC 431
Score = 67 (28.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 26/102 (25%), Positives = 38/102 (37%)
Query: 29 CQGDRDGPNCEKCRDNYYQ-----KSGDNFCT--ACNCNPI-GSLNLQCNS-----EGRC 75
C R+ PN + +Y G FC A C P+ G ++ G+C
Sbjct: 234 CPCQRNDPNAKPQHFTHYAIYDFIVKGSCFCNGHADQCVPVDGFKPVKAPGAFHVVHGKC 293
Query: 76 QCKPGVTGDKCDRCDVNHYDF------GEAG----CKSCECN 107
CK G C C + D G+ G C++C+CN
Sbjct: 294 MCKHNTAGTHCQHCAPLYNDRPWEAADGKTGSPKECRTCKCN 335
Score = 42 (19.8 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 182 GRCQCKPGVTGDKCDRCDVNH 202
G+C+CK V G+ C + +
Sbjct: 504 GKCECKEQVLGNSKAFCRMKY 524
>MGI|MGI:105382 [details] [associations]
symbol:Lama5 "laminin, alpha 5" species:10090 "Mus musculus"
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IMP] [GO:0001738 "morphogenesis of a polarized epithelium"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005178 "integrin
binding" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
[GO:0005604 "basement membrane" evidence=ISO;IDA] [GO:0005605
"basal lamina" evidence=IDA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=ISO] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
[GO:0016477 "cell migration" evidence=ISO] [GO:0030155 "regulation
of cell adhesion" evidence=IEA] [GO:0030324 "lung development"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0043259 "laminin-10 complex"
evidence=ISO;IPI] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IMP] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:105382 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0005178 PROSITE:PS01186 GO:GO:0007229 GO:GO:0042475
EMBL:AL663027 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738 GO:GO:0034446
GO:GO:0090002 GO:GO:0016331 GO:GO:0001658 GO:GO:0060445
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OMA:LRHTTGP OrthoDB:EOG4VHK5G ChiTaRS:LAMA5 GO:GO:0043259
EMBL:AJ293593 EMBL:U37501 IPI:IPI00116913 PIR:T10053
RefSeq:NP_001074640.1 UniGene:Mm.4339 PDB:2Y38 PDBsum:2Y38
ProteinModelPortal:Q61001 SMR:Q61001 STRING:Q61001
PhosphoSite:Q61001 PaxDb:Q61001 PRIDE:Q61001
Ensembl:ENSMUST00000015791 GeneID:16776 KEGG:mmu:16776
InParanoid:A2ABW7 EvolutionaryTrace:Q61001 NextBio:290620
Bgee:Q61001 CleanEx:MM_LAMA5 Genevestigator:Q61001
GermOnline:ENSMUSG00000015647 Uniprot:Q61001
Length = 3718
Score = 314 (115.6 bits), Expect = 3.9e-26, P = 3.9e-26
Identities = 73/225 (32%), Positives = 101/225 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C C+ DGP+C++C Y+ G C AC C+P G+L+ QC G C C+PG TG
Sbjct: 609 GRC-QCRPGFDGPHCDRCLPGYH---GYPDCHACACDPRGALDQQCGVGGLCHCRPGYTG 664
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C C Y F C C C+ GS+ T CD GQC + G +H ++ V
Sbjct: 665 ATCQECSPGFYGF--PSCIPCHCSADGSLHTT--CDPTTGQCRCRPRVT-G-LHCDMCVP 718
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 203
NF P + C +P G + ++ C C+ V G CDRC ++
Sbjct: 719 GAYNF-P----YCEAGSC----HPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGYW 769
Query: 204 DFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ GC C C+P G++ C GQC CK +V G C
Sbjct: 770 GLSASNPEGCTRCSCDPRGTLGGVTECQG-NGQCFCKAHVCGKTC 813
Score = 300 (110.7 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 82/262 (31%), Positives = 113/262 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G G C+ CQ + +G CE+CR + N C +C
Sbjct: 1865 CQCHGHSDRCL--------PG-SGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSC 1915
Query: 58 NCN-PIGSLNLQ--C---NSEGRCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECN 107
C + S N C N +C C+PG G C+RC + G + C+ C+C+
Sbjct: 1916 PCPLAVPSNNFADGCVLRNGRTQCLCRPGYAGASCERCAPGFFGNPLVLGSS-CQPCDCS 1974
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DT 165
G +CD + G C + G H E + F GN + C R D
Sbjct: 1975 GNGDPNMIFSDCDPLTGACRGCLRHTTGP-HCE---RCAPGF--YGNALLP-GNCTRCDC 2027
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKN 223
P G C+ + GRC CK GVTG +CDRC ++ F + GC+ C C PA K
Sbjct: 2028 SPCG-----TETCDPQSGRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAA--KG 2080
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+ C GQC C+ G QC
Sbjct: 2081 S-ECHPQSGQCHCQPGTTGPQC 2101
Score = 280 (103.6 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 75/267 (28%), Positives = 110/267 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC+G + C++D E+ R GG CLDCQ G NCE+C +++
Sbjct: 364 CNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQ 423
Query: 49 --SGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C C+C + C GRC C+P TG+ C C + DF C
Sbjct: 424 PLDSPHVCRPCDCES-DFTDGTCEDLTGRCYCRPNFTGELCAACAEGYTDFPH--CYPLP 480
Query: 106 CNPAGSVKNT--PNCDSVKGQCESAQLSSRG-RVHTEL-RVQSRKNFDPAGNRIWDLRRC 161
P + P V C +A R L R + NF A +
Sbjct: 481 SFPHNDTREQVLPAGQIVNCDCNAAGTQGNACRKDPRLGRCVCKPNFRGAHCELCAPGFH 540
Query: 162 KRDTYPL--GHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
+P G N C+ E G+C C+ G GD+CD C + ++ F C+ C C+PA
Sbjct: 541 GPSCHPCQCSSPGVANSLCDPESGQCMCRTGFEGDRCDHCALGYFHFPL--CQLCGCSPA 598
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
G++ CD G+C+C+ +G C
Sbjct: 599 GTLPE--GCDEA-GRCQCRPGFDGPHC 622
Score = 276 (102.2 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 69/235 (29%), Positives = 103/235 (43%)
Query: 16 LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGR 74
L + G GG C C+ G C++C +Y G C C+C+ GSL+ C+ + G+
Sbjct: 646 LDQQCGVGGLC-HCRPGYTGATCQECSPGFY---GFPSCIPCHCSADGSLHTTCDPTTGQ 701
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES-AQLSSR 133
C+C+P VTG CD C Y+F C++ C+PAG P + C A +
Sbjct: 702 CRCRPRVTGLHCDMCVPGAYNFPY--CEAGSCHPAGLAPANPALPETQAPCMCRAHVEGP 759
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
+ +P G RC D P G G + +C G+C CK V G
Sbjct: 760 SCDRCKPGYWGLSASNPEG-----CTRCSCD--PRGTLGGVT-ECQGNGQCFCKAHVCGK 811
Query: 194 KCDRCDVNHY--DFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + D+ + GC+SC C+ G++ C+ G C C+ N +G C
Sbjct: 812 TCAACKDGFFGLDYADYFGCRSCRCDVGGALGQ--GCEPKTGACRCRPNTQGPTC 864
Score = 227 (85.0 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 69/254 (27%), Positives = 105/254 (41%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNCN 60
N F++ C R G CL C+ G +CE+C ++ G + C C+C+
Sbjct: 1924 NNFADGCVL------RNGRT-QCL-CRPGYAGASCERCAPGFFGNPLVLGSS-CQPCDCS 1974
Query: 61 PIGSLNL---QCNS-EGRCQ-CKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPAGSVK 113
G N+ C+ G C+ C TG C+RC Y C C+C+P G
Sbjct: 1975 GNGDPNMIFSDCDPLTGACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRCDCSPCG--- 2031
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-G 172
T CD G+C L G V ++ D + +C+ P G
Sbjct: 2032 -TETCDPQSGRC----LCKAG-------VTGQR-CDRCLEGYFGFEQCQ-GCRPCACGPA 2077
Query: 173 SLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 231
+ +C+ + G+C C+PG TG +C C ++ E GC+ C+C P G +CD
Sbjct: 2078 AKGSECHPQSGQCHCQPGTTGPQCLECAPGYWGLPEKGCRRCQC-PRG------HCDPHT 2130
Query: 232 GQCECKDNVEGAQC 245
G C C + G +C
Sbjct: 2131 GHCTCPPGLSGERC 2144
Score = 219 (82.2 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 67/211 (31%), Positives = 87/211 (41%)
Query: 1 CNC--NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTAC 57
C+C NG N F D + G C C GP+CE+C +Y + CT C
Sbjct: 1971 CDCSGNGDPNMIFSDCDPLT-----GACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRC 2025
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTP 116
+C+P G+ S GRC CK GVTG +CDRC ++ F + GC+ C C PA K +
Sbjct: 2026 DCSPCGTETCDPQS-GRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAA--KGS- 2081
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD------TYPLGH 170
C GQC Q + G E G R R D T P G
Sbjct: 2082 ECHPQSGQCH-CQPGTTGPQCLEC-APGYWGLPEKGCRRCQCPRGHCDPHTGHCTCPPGL 2139
Query: 171 GGSLNLQCNSEGRCQC--KPGVTGDKCDRCD 199
G C+ + + KPG G C+ CD
Sbjct: 2140 SGERCDTCSQQHQVPVPGKPGGHGIHCEVCD 2170
Score = 187 (70.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 68/251 (27%), Positives = 99/251 (39%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDC-QGDRDGPNCEKCRDNYYQKSGDNFCTA----- 56
C + RC+ N TG C C +G D P+C + + + A
Sbjct: 445 CEDLTGRCYCRP---NFTGE--LCAACAEGYTDFPHCYPLPSFPHNDTREQVLPAGQIVN 499
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
C+CN G+ C + R + C++ F C C+C+ G V N+
Sbjct: 500 CDCNAAGTQGNACRKDPRLGRCVCKPNFRGAHCELCAPGFHGPSCHPCQCSSPG-VANSL 558
Query: 117 NCDSVKGQCESAQLSSRGRV-HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
CD GQC R H L +F P + L C P G+L
Sbjct: 559 -CDPESGQCMCRTGFEGDRCDHCAL---GYFHF-P----LCQLCGCS----P---AGTLP 602
Query: 176 LQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C+ GRCQC+PG G CDRC ++ + + C +C C+P G++ C V G C
Sbjct: 603 EGCDEAGRCQCRPGFDGPHCDRCLPGYHGYPD--CHACACDPRGALDQ--QC-GVGGLCH 657
Query: 236 CKDNVEGAQCR 246
C+ GA C+
Sbjct: 658 CRPGYTGATCQ 668
Score = 174 (66.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 28/69 (40%), Positives = 45/69 (65%)
Query: 178 CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
C+ + G+C+C+P V G +CD C Y G C+ C+C+ AG++ + CD + GQC C
Sbjct: 1548 CDMDSGQCRCRPNVAGRRCDTCAPGFY--GYPSCRPCDCHEAGTMASV--CDPLTGQCHC 1603
Query: 237 KDNVEGAQC 245
K+NV+G++C
Sbjct: 1604 KENVQGSRC 1612
Score = 166 (63.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 49/187 (26%), Positives = 74/187 (39%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG--SLNLQC-NSEGRCQCKPG 80
G C C+ G +C+ C Y +C A +C+P G N ++ C C+
Sbjct: 700 GQCR-CRPRVTGLHCDMCVPGAYNFP---YCEAGSCHPAGLAPANPALPETQAPCMCRAH 755
Query: 81 VTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G CDRC ++ + GC C C+P G++ C GQC + G+
Sbjct: 756 VEGPSCDRCKPGYWGLSASNPEGCTRCSCDPRGTLGGVTECQG-NGQC-FCKAHVCGKTC 813
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ D A + R C+ D GG+L C + G C+C+P G C
Sbjct: 814 AACK-DGFFGLDYAD--YFGCRSCRCDV-----GGALGQGCEPKTGACRCRPNTQGPTCS 865
Query: 197 RCDVNHY 203
+HY
Sbjct: 866 EPAKDHY 872
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 56/229 (24%), Positives = 93/229 (40%)
Query: 25 HCLDCQGDRDGPNCEK--CRDNYYQKS--GDNFCTACNCNPIGSLNLQCNS-EGRCQCKP 79
HC QG P+ CR+ S +N C C+ +G+++ C G+C C+
Sbjct: 1408 HCAT-QGYHISPSSSSPFCRNAATSLSLFYNNGALPCGCHEVGAVSPTCEPFGGQCPCRG 1466
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
V G C RC ++ F C+ C+C CD + GQC + V +
Sbjct: 1467 HVIGRDCSRCATGYWGF--PNCRPCDCGAR-------LCDELTGQC----ICPPRTVPPD 1513
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
V ++F + + C + +S G+C+C+P V G +CD C
Sbjct: 1514 CLVCQPQSF--GCHPLVGCEECNCSGPGVQELTDPTCDMDS-GQCRCRPNVAGRRCDTCA 1570
Query: 200 VNHY--------DFGEAGCKSCECNPAGSVKNTPNC-DSVKG-QCE-CK 237
Y D EAG + C+P + +C ++V+G +C+ C+
Sbjct: 1571 PGFYGYPSCRPCDCHEAGTMASVCDP---LTGQCHCKENVQGSRCDQCR 1616
Score = 142 (55.0 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 47/166 (28%), Positives = 64/166 (38%)
Query: 58 NCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT 115
NC P C+ G+C C P C C + GC+ C C+ G + T
Sbjct: 1485 NCRPCDCGARLCDELTGQCICPPRTVPPDCLVCQPQSFGCHPLVGCEECNCSGPGVQELT 1544
Query: 116 -PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGS 173
P CD GQC R R + V R+ D + C+ D + G S
Sbjct: 1545 DPTCDMDSGQC-------RCRPN----VAGRR-CDTCAPGFYGYPSCRPCDCHEAGTMAS 1592
Query: 174 LNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
+ C+ G+C CK V G +CD+C V + A GC C C
Sbjct: 1593 V---CDPLTGQCHCKENVQGSRCDQCRVGTFSLDAANPKGCTRCFC 1635
Score = 125 (49.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 40/134 (29%), Positives = 51/134 (38%)
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
+P C+ GQC RG H R SR W C+ P G L
Sbjct: 1452 SPTCEPFGGQCPC-----RG--HVIGRDCSR-----CATGYWGFPNCR----PCDCGARL 1495
Query: 175 NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT-PNCDSVK 231
C+ G+C C P C C + GC+ C C+ G + T P CD
Sbjct: 1496 ---CDELTGQCICPPRTVPPDCLVCQPQSFGCHPLVGCEECNCSGPGVQELTDPTCDMDS 1552
Query: 232 GQCECKDNVEGAQC 245
GQC C+ NV G +C
Sbjct: 1553 GQCRCRPNVAGRRC 1566
Score = 78 (32.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 19/63 (30%), Positives = 23/63 (36%)
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDNVEG 242
C C GD C C +Y G C P ++ C G C C+ N EG
Sbjct: 1832 CMCPANYRGDSCQECAPGYYR-DTKGLFLGRCVPCQCHGHSDRCLPGSGICVGCQHNTEG 1890
Query: 243 AQC 245
QC
Sbjct: 1891 DQC 1893
Score = 55 (24.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 74 RCQCKPGVTGDKCDRC--DVNHYDFGEAG------CKSCECN 107
+C C+ G CDRC N + A C+SC C+
Sbjct: 326 QCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCH 367
Score = 54 (24.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-----SGD--NF 53
C C+G ++ C L C CQ + G +C++C + Q+ + D N
Sbjct: 305 CVCHGHADVCDAKDPL---DPFRLQCA-CQHNTCGGSCDRCCPGFNQQPWKPATTDSANE 360
Query: 54 CTACNCN 60
C +CNC+
Sbjct: 361 CQSCNCH 367
>UNIPROTKB|E1C700 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005608
"laminin-3 complex" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA]
GO:GO:0050808 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005608 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:QPYCIVS EMBL:AADN02014165 EMBL:AADN02014166
EMBL:AADN02014167 EMBL:AADN02014168 EMBL:AADN02014169
EMBL:AADN02014170 IPI:IPI00820014 ProteinModelPortal:E1C700
Ensembl:ENSGALT00000036239 ArrayExpress:E1C700 Uniprot:E1C700
Length = 1773
Score = 309 (113.8 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 80/265 (30%), Positives = 113/265 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
C CNG + C D + G CL C+ DG C++C ++ SG + C
Sbjct: 854 CQCNGHAEEC--DPQT-------GSCLRCRDHTDGERCQRCAAGHFGNPALGSGQH-CRP 903
Query: 57 CNC--NPIGSLNL--QCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C C P G + C +GR C C PG TG +CD C +Y D + G C+ C
Sbjct: 904 CPCPDGPGGPRHFAASCYQDGRSRQVVCHCSPGYTGPRCDECAPGYYGDPLQPGGHCRPC 963
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
+C+ + CD GQC ++ G H + + + R RRC +
Sbjct: 964 QCHNNIDTTDPEACDRRTGQCLRCLYNTAGP-HC---AECQPGYYGDAMR-HSCRRCSCN 1018
Query: 165 TYPLGHG--GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGS 220
T G QC+ G+C C P V G CDRC N ++ G GC+ C C+P S
Sbjct: 1019 TLGTDPNTCGPQQCQCDQRSGQCHCLPHVEGQSCDRCSPNFWNLGSGQGCEPCACHPQHS 1078
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ +P C+ GQC C+ G C
Sbjct: 1079 L--SPACNQFTGQCSCRPGFGGRTC 1101
Score = 281 (104.0 bits), Expect = 9.1e-24, Sum P(2) = 9.1e-24
Identities = 72/223 (32%), Positives = 105/223 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C C+ +N D E +R G CL C + GP+C +C+ YY + + C C+CN
Sbjct: 963 CQCH--NNIDTTDPEACDR--RTGQCLRCLYNTAGPHCAECQPGYYGDAMRHSCRRCSCN 1018
Query: 61 PIGS-------LNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGS 111
+G+ QC+ G+C C P V G CDRC N ++ G GC+ C C+P S
Sbjct: 1019 TLGTDPNTCGPQQCQCDQRSGQCHCLPHVEGQSCDRCSPNFWNLGSGQGCEPCACHPQHS 1078
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
+ +P C+ GQC S + GR T Q + DP R+ R C D P G
Sbjct: 1079 L--SPACNQFTGQC-SCRPGFGGR--TCANCQEQHWGDP---RL-QCRACDCD--PRGIA 1127
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
+ QC+ G C C+PG++G +CD+C + C+ C
Sbjct: 1128 ST---QCHHGSGHCDCRPGISGVRCDQC-ARGFSGTFPACQPC 1166
Score = 279 (103.3 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 74/236 (31%), Positives = 102/236 (43%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G C +C + G C C C+ GSL+ C++ G+C C+ G
Sbjct: 776 GGQCR-CKPNVVGRRCHRCSPGTFG-FGPGGCRPCQCSGEGSLSAVCDTITGQCPCRQGA 833
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CDRC H+ F C+ C+CN G + CD G C R R HT+
Sbjct: 834 HGSRCDRCQPGHWGFPT--CRPCQCN--GHAEE---CDPQTGSC------LRCRDHTDGE 880
Query: 142 VQSRKNFDPAGN-RIWDLRRCKRDTYPLGHGGSLNL--QCNSEGR-----CQCKPGVTGD 193
R GN + + C+ P G GG + C +GR C C PG TG
Sbjct: 881 RCQRCAAGHFGNPALGSGQHCRPCPCPDGPGGPRHFAASCYQDGRSRQVVCHCSPGYTGP 940
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+CD C +Y D + G C+ C+C+ + CD GQC C N G C
Sbjct: 941 RCDECAPGYYGDPLQPGGHCRPCQCHNNIDTTDPEACDRRTGQCLRCLYNTAGPHC 996
Score = 265 (98.3 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 68/230 (29%), Positives = 102/230 (44%)
Query: 29 CQGDRDGPNCEKCRDNYY----QKSGDNFCTACNC-NPIGSLNLQ-CNSE-GRC-QCKPG 80
C GP C++C YY Q G C C C N I + + + C+ G+C +C
Sbjct: 933 CSPGYTGPRCDECAPGYYGDPLQPGGH--CRPCQCHNNIDTTDPEACDRRTGQCLRCLYN 990
Query: 81 VTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C C +Y D C+ C CN G+ NT C + QC+ Q S G+ H
Sbjct: 991 TAGPHCAECQPGYYGDAMRHSCRRCSCNTLGTDPNT--CGPQQCQCD--QRS--GQCHCL 1044
Query: 140 LRVQSRKNFDPAGNRIWDL---RRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
V+ + + D W+L + C+ H SL+ CN G+C C+PG G C
Sbjct: 1045 PHVEGQ-SCDRCSPNFWNLGSGQGCEPCACHPQH--SLSPACNQFTGQCSCRPGFGGRTC 1101
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C H+ C++C+C+P G + +T C G C+C+ + G +C
Sbjct: 1102 ANCQEQHWGDPRLQCRACDCDPRG-IAST-QCHHGSGHCDCRPGISGVRC 1149
Score = 219 (82.2 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 58/201 (28%), Positives = 92/201 (45%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF-----CTACNCNPIGSLNL-QCNSE---- 72
G C CQ + G C C+ YY+ + C C+C+P GSL+ C++
Sbjct: 353 GAVCDGCQHNTMGRRCHLCKPFYYRHPRSDIRAPTACVPCDCDPAGSLDGGACDAHTDVA 412
Query: 73 -----GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQ 124
G+C+CK V G +CDRC Y + GC+ C C+P G+V + CD + G
Sbjct: 413 LGMIAGQCRCKENVAGPRCDRCQHGAYGLSQGDPQGCQRCLCDPRGTVADGSQCDPISGD 472
Query: 125 CESAQLSSRGRVHTE-LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-G 182
C +L + GR + L + D G + C+ D GG+ + QC E G
Sbjct: 473 CLCKRLVT-GRSCDQCLPEHWALSHDLPG-----CQPCECDV-----GGAHDNQCAMETG 521
Query: 183 RCQCKPGVTGDKCDRCDVNHY 203
+C+C+ + G +C++ + Y
Sbjct: 522 QCRCRSHIVGRQCEQVEPGFY 542
Score = 204 (76.9 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 64/221 (28%), Positives = 88/221 (39%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P E C + S N C C+P G L+ +C +G +C+CKP V G +C RC
Sbjct: 737 PVAEPCSRLLHSLSAILHNGALPCLCDPQGLLSAECQPQGGQCRCKPNVVGRRCHRCSPG 796
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
+ FG GC+ C+C+ GS+ CD++ GQC Q + R R Q P G
Sbjct: 797 TFGFGPGGCRPCQCSGEGSLSAV--CDTITGQCPCRQGAHGSRCD---RCQ------P-G 844
Query: 153 NRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP-GVTGDKCDRCDVNHYDFGEAG-C 210
+ W C R GH + Q S RC+ G +C + G C
Sbjct: 845 H--WGFPTC-RPCQCNGHAEECDPQTGSCLRCRDHTDGERCQRCAAGHFGNPALGSGQHC 901
Query: 211 KSCEC--NPAGSVKNTPNC--DSVKGQ--CECKDNVEGAQC 245
+ C C P G +C D Q C C G +C
Sbjct: 902 RPCPCPDGPGGPRHFAASCYQDGRSRQVVCHCSPGYTGPRC 942
Score = 184 (69.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 58/196 (29%), Positives = 80/196 (40%)
Query: 70 NSEGR-CQ-CKPGVTGDKCDRCDVNHY-----DF-GEAGCKSCECNPAGSVKNTPNCDS- 120
N+ G C C+ G +C C +Y D C C+C+PAGS+ CD+
Sbjct: 350 NTSGAVCDGCQHNTMGRRCHLCKPFYYRHPRSDIRAPTACVPCDCDPAGSLDGGA-CDAH 408
Query: 121 -------VKGQCESAQLSSRGRV-HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
+ GQC + + R + DP G +RC D G
Sbjct: 409 TDVALGMIAGQCRCKENVAGPRCDRCQHGAYGLSQGDPQG-----CQRCLCDPRGTVADG 463
Query: 173 SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDS 229
S QC+ G C CK VTG CD+C H+ GC+ CEC+ G+ N C
Sbjct: 464 S---QCDPISGDCLCKRLVTGRSCDQCLPEHWALSHDLPGCQPCECDVGGAHDN--QCAM 518
Query: 230 VKGQCECKDNVEGAQC 245
GQC C+ ++ G QC
Sbjct: 519 ETGQCRCRSHIVGRQC 534
Score = 154 (59.3 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 33/99 (33%), Positives = 47/99 (47%)
Query: 160 RCKRDTYPLGHGGSLNLQCNSEG-----------RCQCKPGVTGDKCDRCDVNHYDFGEA 208
RC T+ G GG QC+ EG +C C+ G G +CDRC H+ F
Sbjct: 792 RCSPGTFGFGPGGCRPCQCSGEGSLSAVCDTITGQCPCRQGAHGSRCDRCQPGHWGFPT- 850
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
C+ C+CN G + CD G C C+D+ +G +C+
Sbjct: 851 -CRPCQCN--GHAEE---CDPQTGSCLRCRDHTDGERCQ 883
Score = 141 (54.7 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 42/139 (30%), Positives = 59/139 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPN-CEKCRDNYYQKSGDNFCTACNC 59
C N RC K Y R H + D P C C D +G AC+
Sbjct: 359 CQHNTMGRRCHLCKPFYYR--HP------RSDIRAPTACVPC-D--CDPAGSLDGGACDA 407
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTP 116
+ +L + G+C+CK V G +CDRC Y + GC+ C C+P G+V +
Sbjct: 408 HTDVALGMIA---GQCRCKENVAGPRCDRCQHGAYGLSQGDPQGCQRCLCDPRGTVADGS 464
Query: 117 NCDSVKGQCESAQLSSRGR 135
CD + G C +L + GR
Sbjct: 465 QCDPISGDCLCKRLVT-GR 482
Score = 130 (50.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 73/260 (28%), Positives = 98/260 (37%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNFCTACNCNPIGSLNLQCNSEGRCQ 76
G C+ C+ G NCE+C D Y++ S N C C+CN + +C+ +
Sbjct: 290 GRCV-CKHHTQGLNCERCEDFYHELPWRPAEGSSTNACRRCDCN---EHSRRCHFDMAVF 345
Query: 77 CKPGVT-GDKCDRCDVNHYDFGEAGCKSCEC----NPAGSVKNTPNCDSVKGQCESAQLS 131
G T G CD C H G C C+ +P ++ C V C+ A
Sbjct: 346 LATGNTSGAVCDGCQ--HNTMGRR-CHLCKPFYYRHPRSDIRAPTAC--VPCDCDPAGSL 400
Query: 132 SRGR--VHTELRV-----QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC 184
G HT++ + Q R + AG R D RC+ Y L G Q RC
Sbjct: 401 DGGACDAHTDVALGMIAGQCRCKENVAGPRC-D--RCQHGAYGLSQGDPQGCQ-----RC 452
Query: 185 QCKP-GVTGDKCDRCDVNHYDFGEAGCK------SCE-CNPA--GSVKNTPNCDSVKGQC 234
C P G D +CD G+ CK SC+ C P + P C C
Sbjct: 453 LCDPRGTVADG-SQCDPIS---GDCLCKRLVTGRSCDQCLPEHWALSHDLPGCQP----C 504
Query: 235 ECK-----DN---VEGAQCR 246
EC DN +E QCR
Sbjct: 505 ECDVGGAHDNQCAMETGQCR 524
Score = 39 (18.8 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF 53
G C C+ G CE+ +Y+ + D++
Sbjct: 521 GQCR-CRSHIVGRQCEQVEPGFYRINLDHY 549
Score = 37 (18.1 bits), Expect = 9.1e-24, Sum P(2) = 9.1e-24
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
C AG V P +S G C+D +GA+
Sbjct: 1385 CGAAGDV---PCAESPCGGAGCRDE-DGAR 1410
>FB|FBgn0261800 [details] [associations]
symbol:LanB1 "LanB1" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005604
"basement membrane" evidence=ISS;NAS;IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009888 "tissue development"
evidence=NAS] [GO:0009887 "organ morphogenesis" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016477
"cell migration" evidence=IMP] [GO:0070831 "basement membrane
assembly" evidence=IMP] [GO:0048513 "organ development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
GO:GO:0016477 GO:GO:0008406 EMBL:AE014134 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 EMBL:M95811 EMBL:M19525
EMBL:BT015222 EMBL:AY095001 PIR:A28783 RefSeq:NP_476618.1
RefSeq:NP_723319.1 ProteinModelPortal:P11046 SMR:P11046
IntAct:P11046 MINT:MINT-749338 STRING:P11046 PaxDb:P11046
PRIDE:P11046 EnsemblMetazoa:FBtr0079490 EnsemblMetazoa:FBtr0079491
GeneID:34068 KEGG:dme:Dmel_CG7123 CTD:34068 FlyBase:FBgn0261800
GeneTree:ENSGT00620000087753 InParanoid:P11046 KO:K05636
OMA:DQCAENH OrthoDB:EOG4ZPC92 PhylomeDB:P11046 ChiTaRS:LanB1
GenomeRNAi:34068 NextBio:786713 Bgee:P11046 GermOnline:CG7123
GO:GO:0070831 InterPro:IPR013015 PROSITE:PS51116 Uniprot:P11046
Length = 1788
Score = 309 (113.8 bits), Expect = 5.5e-26, P = 5.5e-26
Identities = 80/262 (30%), Positives = 117/262 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTAC 57
C CNG + C D G C+DCQ G +C+ C D YY G C C
Sbjct: 883 CQCNGHAATC--DPIQ-------GTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPC 933
Query: 58 NCNPIGSLNLQ----CNSEGR-----CQCKPGVTGDKCDRCDVNHYDFGEAG--CKSCEC 106
C + L C+ + R C C+ G +G +C+ C N + + G C CEC
Sbjct: 934 RCPETVASGLAHADGCSLDTRNNNMLCHCQEGYSGSRCEICADNFFGNPDNGGTCSKCEC 993
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW-DLRRCKRDT 165
+ + +T NCD G C + G H EL + F G+ + + ++C+ D
Sbjct: 994 SNNVDLYDTGNCDRQTGACLKCLYQTTGD-HCEL---CKDGF--FGDALQQNCQQCECDF 1047
Query: 166 YPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKN 223
LG ++ C+ G+C C P V G +CD+C NH+ GC+SC C+P G++
Sbjct: 1048 --LGTNNTI-AHCDRFTGQCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGALHE 1104
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
C+S GQC+CK G C
Sbjct: 1105 --QCNSYTGQCQCKPGFGGRAC 1124
Score = 268 (99.4 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 68/225 (30%), Positives = 104/225 (46%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDN--FCTACNC-NPIGSLNL-QCNSE-GRC-QCKPGVT 82
CQ G CE C DN++ DN C+ C C N + + C+ + G C +C T
Sbjct: 962 CQEGYSGSRCEICADNFFGNP-DNGGTCSKCECSNNVDLYDTGNCDRQTGACLKCLYQTT 1020
Query: 83 GDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
GD C+ C + D + C+ CEC+ G+ +CD GQC + +G V +
Sbjct: 1021 GDHCELCKDGFFGDALQQNCQQCECDFLGTNNTIAHCDRFTGQCPCLP-NVQG-VRCDQC 1078
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
++ +G C D P+G +L+ QCNS G+CQCKPG G C++C
Sbjct: 1079 AENHWKI-ASGE---GCESCNCD--PIG---ALHEQCNSYTGQCQCKPGFGGRACNQCQA 1129
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+++ C+ CEC+ G+ CD G C C + + G +C
Sbjct: 1130 HYWGNPNEKCQPCECDQFGAADF--QCDRETGNCVCHEGIGGYKC 1172
Score = 260 (96.6 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 68/217 (31%), Positives = 104/217 (47%)
Query: 10 CFFDKELYNRTGH----GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL 65
C + +LY+ TG+ G CL C G +CE C+D ++ + C C C+ +G+
Sbjct: 993 CSNNVDLYD-TGNCDRQTGACLKCLYQTTGDHCELCKDGFFGDALQQNCQQCECDFLGTN 1051
Query: 66 NL--QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSV 121
N C+ G+C C P V G +CD+C NH+ GC+SC C+P G++ C+S
Sbjct: 1052 NTIAHCDRFTGQCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGALHE--QCNSY 1109
Query: 122 KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE 181
GQC+ + GR Q + ++ GN + C+ D + G+ + QC+ E
Sbjct: 1110 TGQCQ-CKPGFGGRACN----QCQAHY--WGNPNEKCQPCECDQF-----GAADFQCDRE 1157
Query: 182 -GRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSC-EC 215
G C C G+ G KC+ C Y G+ C C EC
Sbjct: 1158 TGNCVCHEGIGGYKCNEC-ARGY-IGQFPHCSPCGEC 1192
Score = 250 (93.1 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 70/222 (31%), Positives = 100/222 (45%)
Query: 33 RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDRCDV 91
+ P C+ DN + + CNCNP GSL+ C S G CQCKP V G +CD+C
Sbjct: 766 KSDPKCQNL-DNILSVFVHDGASMCNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAP 824
Query: 92 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
Y FG GCK+C+CN GS K+ CD + GQC+ ++ GR E Q + +
Sbjct: 825 GTYGFGPEGCKACDCNSIGS-KDK-YCDLITGQCQCVP-NTYGR---ECN-QCQPGY--- 874
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFG-EAG 209
W+ C R GH + + + CQ G + D C + FG E G
Sbjct: 875 ----WNFPEC-RVCQCNGHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIG 929
Query: 210 CKSCEC--NPAGSVKNTPNC--DSVKGQ--CECKDNVEGAQC 245
C+ C C A + + C D+ C C++ G++C
Sbjct: 930 CRPCRCPETVASGLAHADGCSLDTRNNNMLCHCQEGYSGSRC 971
Score = 236 (88.1 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 61/225 (27%), Positives = 107/225 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CN + C FD+ ++ +G GG C +C + G +CE+C +Y+ + +
Sbjct: 355 CECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERV 414
Query: 54 CTACNCNPIGSLNLQ-CNS---------EGRCQCKPGVTGDKCDRCDVNHYDF---GEAG 100
C C+C+P GS + C+S G C CK VTG +C++C +++ G
Sbjct: 415 CQPCDCDPQGSSDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEG 474
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK-NFDPAGNRIWDLR 159
C+ C CNP G++ N+ C G+C+ + + G+ + ++ + P G +
Sbjct: 475 CEPCTCNPLGTLNNS-GCVMRTGECKCKKYVT-GKDCNQCMPETYGLSESPEGCSL---- 528
Query: 160 RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
C D GGS + C+ G+C+C+P +TG C + N++
Sbjct: 529 -CNCDA-----GGSYDNYCDVISGQCRCRPHMTGRSCSQPKQNYF 567
Score = 199 (75.1 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 60/192 (31%), Positives = 86/192 (44%)
Query: 71 SEGRCQ-CKPGVTGDKCDRCDVNHY-----DF-GEAGCKSCECNPAGSVKNTPNCDSVKG 123
S G C C G C+ C Y D E C+ C+C+P GS + CDS+
Sbjct: 378 SGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGS-SDDGICDSLN- 435
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR-----CKRDTY-PLGHGGSLNLQ 177
+ E ++ G H + V R+ + + W+L+ C+ T PLG +LN
Sbjct: 436 ELEEGAVA--GACHCKAFVTGRR-CNQCKDGYWNLQSDNPEGCEPCTCNPLG---TLNNS 489
Query: 178 -CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQ 233
C G C+CK VTG C++C Y E+ GC C C+ GS N CD + GQ
Sbjct: 490 GCVMRTGECKCKKYVTGKDCNQCMPETYGLSESPEGCSLCNCDAGGSYDNY--CDVISGQ 547
Query: 234 CECKDNVEGAQC 245
C C+ ++ G C
Sbjct: 548 CRCRPHMTGRSC 559
Score = 139 (54.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 32/100 (32%), Positives = 48/100 (48%)
Query: 160 RCKRDTYPLGHGGSLNLQCNS-----------EGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
+C TY G G CNS G+CQC P G +C++C +++F E
Sbjct: 821 QCAPGTYGFGPEGCKACDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQCQPGYWNFPE- 879
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCRS 247
C+ C+CN G + CD ++G C +C+D+ G C S
Sbjct: 880 -CRVCQCN--G---HAATCDPIQGTCIDCQDSTTGYSCDS 913
>UNIPROTKB|E2QZY0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277 KO:K06845
OMA:RSQDFGK EMBL:AAEX03009952 EMBL:AAEX03009953 RefSeq:XP_532655.2
Ensembl:ENSCAFT00000010328 GeneID:475431 KEGG:cfa:475431
Uniprot:E2QZY0
Length = 628
Score = 281 (104.0 bits), Expect = 7.1e-26, Sum P(2) = 7.1e-26
Identities = 55/142 (38%), Positives = 81/142 (57%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQ------CN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L C+ S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKMCSCHPVGSAALPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCISS 465
Score = 152 (58.6 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 50/147 (34%), Positives = 68/147 (46%)
Query: 101 CKSCECNP-AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
C++C+CN A + N G S + + + +TE Q + P R DLR
Sbjct: 329 CRTCKCNGHADTCHFDINVWEASGN-RSGGVCNDCQHNTE--GQHCQRCKPGFYR--DLR 383
Query: 160 R-------CKR-DTYPLGHGG---SLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
R CK +P+G S C+ S G C CKPGV G CDRC V ++ FG+
Sbjct: 384 RPFSAPDACKMCSCHPVGSAALPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGD 443
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQC 234
GC+ C+C AGS CD + G C
Sbjct: 444 YGCRPCDC--AGS------CDPLTGDC 462
Score = 111 (44.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 32/82 (39%), Positives = 37/82 (45%)
Query: 171 GGSLN-LQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV----KN 223
GG N Q N+EG+ CQ CKPG D R + D CK C C+P GS +
Sbjct: 356 GGVCNDCQHNTEGQHCQRCKPGFYRDL--RRPFSAPD----ACKMCSCHPVGSAALPFSS 409
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD G C CK V G C
Sbjct: 410 VTFCDPSNGDCPCKPGVAGPHC 431
Score = 63 (27.2 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDF------GEAG----CKSCECN 107
G+C CK G C C + D G+ G C++C+CN
Sbjct: 291 GKCMCKHNTAGTHCQHCAPLYNDRPWEAADGKTGSPKECRTCKCN 335
Score = 43 (20.2 bits), Expect = 7.1e-26, Sum P(2) = 7.1e-26
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 182 GRCQCKPGVTGDKCDRCDVNH 202
G+C+CK V G+ C + +
Sbjct: 504 GKCECKEQVLGNSKAFCGMKY 524
>UNIPROTKB|F1LPI5 [details] [associations]
symbol:Lamb3 "Protein Lamb3" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0050873 "brown fat cell differentiation" evidence=IEA]
RGD:1562668 GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED IPI:IPI00363443 UniGene:Rn.49634
ProteinModelPortal:F1LPI5 Ensembl:ENSRNOT00000008440 NextBio:654049
ArrayExpress:F1LPI5 Uniprot:F1LPI5
Length = 1171
Score = 305 (112.4 bits), Expect = 8.0e-26, P = 8.0e-26
Identities = 80/264 (30%), Positives = 124/264 (46%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ--KSG---DNF 53
C+CNG S C FD ++ ++ GG C +CQ +G NCE+C+ +Y++ + G
Sbjct: 316 CDCNGHSETCHFDPAVFAASQGTSGGVCDNCQDHTEGKNCERCQLHYFRNRRPGAPIHET 375
Query: 54 CTACNCNPIGSL-NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ G+C CK V G++CD C A GC C+C+
Sbjct: 376 CIPCECDPDGAVPGAPCDRLTGQCVCKDHVQGERCDLCKPGFTGLTFANPQGCHPCDCSI 435
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G+ ++ P C+ G+C L V + + ++ A R C D P
Sbjct: 436 LGTRQDMP-CEEETGRC----LCLPNVVGPKCDQCAPSHWKLASGR--GCEPCACD--PR 486
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCD-----RC-DVNHYDFGEAGCKSCECNPAGSV 221
SL+ QCN G+C C+ G G C +C D H D GC++C+C+ G+
Sbjct: 487 N---SLSSQCNQFTGQCPCREGFGGLTCSSAAIRQCPDRTHGDVA-TGCRACDCDFRGT- 541
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
P CD G+C C+ + G +C
Sbjct: 542 -EGPGCDKTSGRCLCRPGLTGPRC 564
Score = 263 (97.6 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 74/248 (29%), Positives = 106/248 (42%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQK-----SGDNF--CTACNCN---------PIGSLNLQC 69
C+ CQ + GPNC++C Y + G + C C+CN P Q
Sbjct: 279 CV-CQHNTAGPNCDRCAPFYNNRPWRPAEGQDIHECQRCDCNGHSETCHFDPAVFAASQG 337
Query: 70 NSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVK 122
S G C C+ G C+RC ++++ G C CEC+P G+V P CD +
Sbjct: 338 TSGGVCDNCQDHTEGKNCERCQLHYFRNRRPGAPIHETCIPCECDPDGAVPGAP-CDRLT 396
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNSE 181
GQC + V E + F G + + C D LG ++ C E
Sbjct: 397 GQCVC-----KDHVQGERCDLCKPGF--TGLTFANPQGCHPCDCSILGT--RQDMPCEEE 447
Query: 182 -GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
GRC C P V G KCD+C +H+ GC+ C C+P S+ + C+ GQC C++
Sbjct: 448 TGRCLCLPNVVGPKCDQCAPSHWKLASGRGCEPCACDPRNSLSS--QCNQFTGQCPCREG 505
Query: 240 VEGAQCRS 247
G C S
Sbjct: 506 FGGLTCSS 513
Score = 233 (87.1 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 57/198 (28%), Positives = 91/198 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSL-NLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C C+C+ +G+ ++ C E GRC C P
Sbjct: 397 GQCV-CKDHVQGERCDLCKPGFTGLTFANPQGCHPCDCSILGTRQDMPCEEETGRCLCLP 455
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C +H+ GC+ C C+P S+ + C+ GQC + G +
Sbjct: 456 NVVGPKCDQCAPSHWKLASGRGCEPCACDPRNSLSS--QCNQFTGQCPCRE-GFGGLTCS 512
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDR 197
++ + G+ R C D G+ C+ + GRC C+PG+TG +CD+
Sbjct: 513 SAAIRQCPD-RTHGDVATGCRACDCD-----FRGTEGPGCDKTSGRCLCRPGLTGPRCDQ 566
Query: 198 CDVNHYDFGEA--GCKSC 213
C + D C SC
Sbjct: 567 CQRGYCDRYPVCVACHSC 584
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 43/154 (27%), Positives = 64/154 (41%)
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA-GNRIWDLRRCK 162
C NP G +T V C ++ + + + PA G I + +RC
Sbjct: 259 CAPNPGGPTGST-TAVQVNDVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQDIHECQRCD 317
Query: 163 ----RDTYPLGHGGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CK 211
+T Q S G C C+ G C+RC ++++ G C
Sbjct: 318 CNGHSETCHFDPAVFAASQGTSGGVCDNCQDHTEGKNCERCQLHYFRNRRPGAPIHETCI 377
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CEC+P G+V P CD + GQC CKD+V+G +C
Sbjct: 378 PCECDPDGAVPGAP-CDRLTGQCVCKDHVQGERC 410
>UNIPROTKB|F1SAE9 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:NTWQLAS EMBL:CU929844
Ensembl:ENSSSCT00000016825 Uniprot:F1SAE9
Length = 1799
Score = 276 (102.2 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 82/269 (30%), Positives = 112/269 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
C CNG + C D G C CQ G NCE+C YY SGD+ C
Sbjct: 880 CQCNGHAEDC--DSVT-------GECSSCQDYTTGHNCERCLAGYYGDAIIGSGDH-CRP 929
Query: 57 CNCNPIG-----SLNLQCNSEG-----RCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKS 103
C C P G C + C C PG G +C+ C + + E G C+
Sbjct: 930 CPC-PDGPESGRQFASSCYQDPVTLQLACVCNPGYIGSRCEDCAAGFFGNPSEVGGTCQP 988
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW-DLRRCK 162
C+C+ + CD G+C + G VH +L R + G+ + D R+C
Sbjct: 989 CQCHHNIDTTDPEACDKETGRCLKCLYHTEG-VHCQL---CRLGY--YGDALQQDCRKCV 1042
Query: 163 RDTYPLG----HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECN 216
+ Y LG H + QC+ + G+C C P V G CDRC N + GC+ C C+
Sbjct: 1043 CN-Y-LGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASGTGCEPCNCD 1100
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
A S P+C+ GQC+C G C
Sbjct: 1101 AAHSFG--PSCNEFTGQCQCMPGFGGRTC 1127
Score = 252 (93.8 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 67/231 (29%), Positives = 98/231 (42%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP-IGSLNLQ-CNSE-GRC-QCKP 79
C+ C G CE C ++ + C C C+ I + + + C+ E GRC +C
Sbjct: 957 CV-CNPGYIGSRCEDCAAGFFGNPSEVGGTCQPCQCHHNIDTTDPEACDKETGRCLKCLY 1015
Query: 80 GVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G C C + +Y D + C+ C CN G+V+ +C+ QC+ + G+
Sbjct: 1016 HTEGVHCQLCRLGYYGDALQQDCRKCVCNYLGTVQE--HCNGSDCQCDK----TTGQCLC 1069
Query: 139 ELRVQSRKNFDPAGNRIWDLRR---CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDK 194
V + N D W L C+ H S CN G+CQC PG G
Sbjct: 1070 LPNVIGQ-NCDRCAPNTWQLASGTGCEPCNCDAAH--SFGPSCNEFTGQCQCMPGFGGRT 1126
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1127 CSECQELFWGDPSVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1175
Score = 247 (92.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 68/235 (28%), Positives = 101/235 (42%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
+GG C C+ + G C++C + G N C C C+ GS+N C+ G+C C G
Sbjct: 801 NGGQC-QCRPNVVGRKCDRCAPGTFG-FGPNGCKPCECHLQGSVNAFCDPVTGQCHCFQG 858
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
V +CDRC ++ F C+ C+CN G ++ CDSV G+C S Q + G H
Sbjct: 859 VYARQCDRCLPGYWGF--PSCQPCQCN--GHAED---CDSVTGECSSCQDYTTG--HNCE 909
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG-----RCQCKPGVTGDKC 195
R + D R C P G C + C C PG G +C
Sbjct: 910 RCLAGYYGDAIIGSGDHCRPCPCPDGPES-GRQFASSCYQDPVTLQLACVCNPGYIGSRC 968
Query: 196 DRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+ C + + E G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 969 EDCAAGFFGNPSEVGGTCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGVHCQ 1023
Score = 242 (90.2 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 69/225 (30%), Positives = 100/225 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ N
Sbjct: 348 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCERCKPFYYQHPERDVRDPNL 407
Query: 54 CTACNCNPIGSLNLQ-CNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C C+P GS N C+ G+C+CK V G+ CD C Y
Sbjct: 408 CEPCTCDPAGSQNGGICDGYTDFSAGLIAGQCRCKLHVEGEHCDICKEGFYGLTAEDPFG 467
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW----DLR 159
C+ + P + C+S G + + R+ + ++ D W DL
Sbjct: 468 CKSCACNPLGTIPGGNP----CDS----ETGYCYCK-RLVTGQHCDQCLPEHWGLSNDLD 518
Query: 160 RCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C+ LG G+LN C++E G+C C+P + G +C+ + Y
Sbjct: 519 GCRPCDCDLG--GALNNSCSAESGQCLCRPHMIGRQCNEVESGFY 561
Score = 241 (89.9 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 66/203 (32%), Positives = 88/203 (43%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--------GRC 75
G CL C +G +C+ CR YY + C C CN +G++ CN G+C
Sbjct: 1008 GRCLKCLYHTEGVHCQLCRLGYYGDALQQDCRKCVCNYLGTVQEHCNGSDCQCDKTTGQC 1067
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N + GC+ C C+ A S P+C+ GQC+ G
Sbjct: 1068 LCLPNVIGQNCDRCAPNTWQLASGTGCEPCNCDAAHSFG--PSCNEFTGQCQCMP-GFGG 1124
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E Q DP+ + R C D P G QC+ S G+C C GV G
Sbjct: 1125 RTCSEC--QELFWGDPSV----ECRACDCD--PRGIETP---QCDQSTGQCVCVEGVEGP 1173
Query: 194 KCDRCDVNHYDFGEAGCKSC-EC 215
+CD+C Y C C +C
Sbjct: 1174 RCDKC-TRGYSGVFPDCTPCHQC 1195
Score = 215 (80.7 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 72/234 (30%), Positives = 103/234 (44%)
Query: 33 RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDV 91
R+ C+KC N + S C+ + L S G C C+ G C+RC
Sbjct: 340 RNSNACKKCNCNEHSSS-------CHFDMAVYLATGNVSGGVCDDCQHNTMGRNCERCKP 392
Query: 92 NHYDFGEAG------CKSCECNPAGSVKNTPNCDS--------VKGQCESAQLSSRGRVH 137
+Y E C+ C C+PAGS +N CD + GQC +L G H
Sbjct: 393 FYYQHPERDVRDPNLCEPCTCDPAGS-QNGGICDGYTDFSAGLIAGQCR-CKLHVEGE-H 449
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTY-PLGH--GGSLNLQCNSE-GRCQCKPGVTGD 193
++ ++ F G D CK PLG GG+ C+SE G C CK VTG
Sbjct: 450 CDI---CKEGF--YGLTAEDPFGCKSCACNPLGTIPGGN---PCDSETGYCYCKRLVTGQ 501
Query: 194 KCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD+C H+ GC+ C+C+ G++ N+ C + GQC C+ ++ G QC
Sbjct: 502 HCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNS--CSAESGQCLCRPHMIGRQC 553
Score = 203 (76.5 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 43/97 (44%), Positives = 53/97 (54%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G KCDRC
Sbjct: 763 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRKCDRCAPG 822
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+ FG GCK CEC+ GSV CD V GQC Q
Sbjct: 823 TFGFGPNGCKPCECHLQGSVNAF--CDPVTGQCHCFQ 857
Score = 193 (73.0 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 37/75 (49%), Positives = 43/75 (57%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G KCDRC + FG GCK CEC+ GSV CD V
Sbjct: 792 GSLSSVCDPNGGQCQCRPNVVGRKCDRCAPGTFGFGPNGCKPCECHLQGSVNAF--CDPV 849
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 850 TGQCHCFQGVYARQC 864
Score = 124 (48.7 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 63/224 (28%), Positives = 87/224 (38%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F +E+ HG HC+ C+ + G NCE C D Y+ +
Sbjct: 284 CFCYGHASECAPVDGFSEEVEGMV-HG-HCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 340
Query: 50 GDNFCTACNCNPIGSLNLQCNSEGRCQCKPG-VTGDKCDRCDVNHYDFGEAGCKSCEC-- 106
N C CNCN S C+ + G V+G CD C H G C+ C+
Sbjct: 341 NSNACKKCNCNEHSS---SCHFDMAVYLATGNVSGGVCDDCQ--HNTMGR-NCERCKPFY 394
Query: 107 --NPAGSVKNTPN-CDSVKGQCESAQLSSRGRV---HTELRV-----QSRKNFDPAGNRI 155
+P V++ PN C+ C+ A S G + +T+ Q R G
Sbjct: 395 YQHPERDVRD-PNLCEPCT--CDPAG-SQNGGICDGYTDFSAGLIAGQCRCKLHVEGEHC 450
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT---GDKCD 196
D+ CK Y L C S C C P T G+ CD
Sbjct: 451 -DI--CKEGFYGLTAEDPFG--CKS---CACNPLGTIPGGNPCD 486
Score = 96 (38.9 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CEC+P GS+ + CD GQC+C+ NV G +C
Sbjct: 785 ACECDPQGSLSSV--CDPNGGQCQCRPNVVGRKC 816
Score = 45 (20.9 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 204 DFGEAGCKSCECNPAGSVKNT----PNCDSVKGQCEC 236
D A +C P S T PNC + +GQ +C
Sbjct: 1402 DLSTAAELTCGTPPGASCSETECGGPNCRTDEGQKKC 1438
>MGI|MGI:1888978 [details] [associations]
symbol:Ntn4 "netrin 4" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0016322 "neuron
remodeling" evidence=IDA] [GO:0043237 "laminin-1 binding"
evidence=IDA] [GO:0060668 "regulation of branching involved in
salivary gland morphogenesis by extracellular matrix-epithelial
cell signaling" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
MGI:MGI:1888978 GO:GO:0016322 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 GO:GO:0043237 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:59277 eggNOG:NOG329215
HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK GO:GO:0060668
EMBL:AF268066 EMBL:AF281278 EMBL:AC124585 EMBL:AC151976
IPI:IPI00119840 RefSeq:NP_067295.2 UniGene:Mm.483868
ProteinModelPortal:Q9JI33 SMR:Q9JI33 STRING:Q9JI33
PhosphoSite:Q9JI33 PRIDE:Q9JI33 Ensembl:ENSMUST00000020204
GeneID:57764 KEGG:mmu:57764 HOGENOM:HOG000060085 InParanoid:Q9JI33
OrthoDB:EOG4M0F17 NextBio:313932 Bgee:Q9JI33 CleanEx:MM_NTN4
Genevestigator:Q9JI33 GermOnline:ENSMUSG00000020019 Uniprot:Q9JI33
Length = 628
Score = 281 (104.0 bits), Expect = 9.1e-26, Sum P(2) = 9.1e-26
Identities = 55/142 (38%), Positives = 82/142 (57%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQ------CN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C AC+C+P+GS L C+ S G C CKPGV G CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKACSCHPVGSAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPLTGDCISS 465
Score = 154 (59.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 49/147 (33%), Positives = 67/147 (45%)
Query: 101 CKSCECNP-AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
C++C+CN A + N G S + + + +TE Q + P R DLR
Sbjct: 329 CRTCKCNGHADTCHFDVNVWEASGN-RSGGVCNNCQHNTE--GQHCQRCKPGFYR--DLR 383
Query: 160 R-------CKR-DTYPLGHG----GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE 207
R CK +P+G S+ S G C CKPGV G CDRC V ++ FG+
Sbjct: 384 RPFSAPDACKACSCHPVGSAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGD 443
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQC 234
GC+ C+C AGS CD + G C
Sbjct: 444 YGCRPCDC--AGS------CDPLTGDC 462
Score = 42 (19.8 bits), Expect = 9.1e-26, Sum P(2) = 9.1e-26
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 182 GRCQCKPGVTGDKCDRCDVNH 202
G+C+CK V G+ C + +
Sbjct: 504 GKCECKEQVLGNPKAFCGMKY 524
Score = 38 (18.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 85 KCDRCDVNH 93
KCD+C+ H
Sbjct: 76 KCDKCNAAH 84
>UNIPROTKB|F1MNT4 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 EMBL:DAAA02010597 EMBL:DAAA02010596 IPI:IPI01017612
Ensembl:ENSBTAT00000015166 OMA:NTWQLAS Uniprot:F1MNT4
Length = 1798
Score = 277 (102.6 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 82/269 (30%), Positives = 110/269 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
C CNG ++ C D G CL CQ G NCE+C YY SGD+ C
Sbjct: 879 CQCNGHADDC--DSVT-------GECLSCQDYTTGHNCERCLAGYYGDPVIGSGDH-CRP 928
Query: 57 CNCNPIG-----SLNLQCNSEG-----RCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKS 103
C C P G C + C C PG G +CD C + + + G C+
Sbjct: 929 CPC-PDGPESGRQFASSCYQDPVSLQLACVCNPGYIGSRCDECASGFFGNPSDVGGTCQP 987
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WDLRRCK 162
C+C+ + CD G+C + G H +L F G+ + D R+C
Sbjct: 988 CQCHHNIDTADPEACDKETGRCLKCLYHTEGE-HCQLC-----RFGYYGDALRQDCRKCV 1041
Query: 163 RDTYPLG----HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECN 216
+ Y LG H + QC+ + G+C C P V G CDRC N + GC C C+
Sbjct: 1042 CN-Y-LGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCSCD 1099
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
A S P+C+ GQC C G C
Sbjct: 1100 AAHSFG--PSCNEFTGQCHCMPGFGGRTC 1126
Score = 252 (93.8 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 66/231 (28%), Positives = 97/231 (41%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP-IGSLNLQ-CNSE-GRC-QCKP 79
C+ C G C++C ++ D C C C+ I + + + C+ E GRC +C
Sbjct: 956 CV-CNPGYIGSRCDECASGFFGNPSDVGGTCQPCQCHHNIDTADPEACDKETGRCLKCLY 1014
Query: 80 GVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G+ C C +Y D C+ C CN G+V+ +C+ QC+ + G+
Sbjct: 1015 HTEGEHCQLCRFGYYGDALRQDCRKCVCNYLGTVQE--HCNGSDCQCDK----TTGQCLC 1068
Query: 139 ELRVQSRKNFDPAGNRIWDLRR---CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDK 194
V + N D W L C + H S CN G+C C PG G
Sbjct: 1069 LPNVIGQ-NCDRCAPNTWQLASGTGCDPCSCDAAH--SFGPSCNEFTGQCHCMPGFGGRT 1125
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1126 CSECQELFWGDPSVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1174
Score = 241 (89.9 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 68/225 (30%), Positives = 101/225 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD +Y TG+ GG C DCQ + G NCE+C+ YYQ +
Sbjct: 347 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPSL 406
Query: 54 CTACNCNPIGSLNLQ-CNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C C+P GS N C+S G+C+CK V G+ CD C Y
Sbjct: 407 CEQCTCDPAGSQNGGICDSYTDFSAGLIAGQCRCKLYVEGEHCDICKEGFYGLSAEDPFG 466
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW----DLR 159
C+ + P + C+S G + + R+ + ++ D W DL
Sbjct: 467 CKSCACNPLGTIPGGNP----CDS----ETGYCYCK-RLVTGQHCDQCLPEHWGLSNDLD 517
Query: 160 RCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C+ +G G+LN C++E G+C C+P + G +C + +Y
Sbjct: 518 GCRPCDCDIG--GALNNSCSAESGQCLCRPHMIGRQCSEVESGYY 560
Score = 238 (88.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 67/235 (28%), Positives = 101/235 (42%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
+GG C C+ + G C++C + G + C C C+ GS++ C+ G+C C G
Sbjct: 800 NGGQC-QCRPNVVGRRCDRCAPGTFG-FGPSGCKPCECHLQGSVSAFCDPITGQCHCFQG 857
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
V +CDRC + F C+ C+CN G + +CDSV G+C S Q + G H
Sbjct: 858 VYTRQCDRCLPGFWGF--PSCQPCQCN--G---HADDCDSVTGECLSCQDYTTG--HNCE 908
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG-----RCQCKPGVTGDKC 195
R + DP R C P G C + C C PG G +C
Sbjct: 909 RCLAGYYGDPVIGSGDHCRPCPCPDGPES-GRQFASSCYQDPVSLQLACVCNPGYIGSRC 967
Query: 196 DRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
D C + + + G C+ C+C+ + CD G+C +C + EG C+
Sbjct: 968 DECASGFFGNPSDVGGTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTEGEHCQ 1022
Score = 237 (88.5 bits), Expect = 9.5e-20, Sum P(2) = 9.5e-20
Identities = 66/203 (32%), Positives = 86/203 (42%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--------GRC 75
G CL C +G +C+ CR YY + C C CN +G++ CN G+C
Sbjct: 1007 GRCLKCLYHTEGEHCQLCRFGYYGDALRQDCRKCVCNYLGTVQEHCNGSDCQCDKTTGQC 1066
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N + GC C C+ A S P+C+ GQC G
Sbjct: 1067 LCLPNVIGQNCDRCAPNTWQLASGTGCDPCSCDAAHSFG--PSCNEFTGQCHCMP-GFGG 1123
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E Q DP+ + R C D P G QC+ S G+C C GV G
Sbjct: 1124 RTCSEC--QELFWGDPSV----ECRACDCD--PRGIETP---QCDQSTGQCVCVEGVEGP 1172
Query: 194 KCDRCDVNHYDFGEAGCKSC-EC 215
+CD+C Y C C +C
Sbjct: 1173 RCDKC-TRGYSGVFPDCTPCHQC 1194
Score = 215 (80.7 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 72/234 (30%), Positives = 104/234 (44%)
Query: 33 RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDV 91
R+ C+KC N + S C+ + L S G C C+ G C++C
Sbjct: 339 RNSNACKKCNCNEHSSS-------CHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKP 391
Query: 92 NHYDFGEAG------CKSCECNPAGSVKNTPNCDS--------VKGQCESAQLSSRGRVH 137
+Y E C+ C C+PAGS +N CDS + GQC +L G H
Sbjct: 392 FYYQHPERDIRDPSLCEQCTCDPAGS-QNGGICDSYTDFSAGLIAGQCR-CKLYVEGE-H 448
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTY-PLGH--GGSLNLQCNSE-GRCQCKPGVTGD 193
++ ++ F G D CK PLG GG+ C+SE G C CK VTG
Sbjct: 449 CDI---CKEGF--YGLSAEDPFGCKSCACNPLGTIPGGN---PCDSETGYCYCKRLVTGQ 500
Query: 194 KCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CD+C H+ GC+ C+C+ G++ N+ C + GQC C+ ++ G QC
Sbjct: 501 HCDQCLPEHWGLSNDLDGCRPCDCDIGGALNNS--CSAESGQCLCRPHMIGRQC 552
Score = 203 (76.5 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 41/97 (42%), Positives = 55/97 (56%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G +CDRC
Sbjct: 762 PMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRRCDRCAPG 821
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+ FG +GCK CEC+ GSV + CD + GQC Q
Sbjct: 822 TFGFGPSGCKPCECHLQGSV--SAFCDPITGQCHCFQ 856
Score = 191 (72.3 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 35/75 (46%), Positives = 45/75 (60%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G +CDRC + FG +GCK CEC+ GSV + CD +
Sbjct: 791 GSLSSVCDPNGGQCQCRPNVVGRRCDRCAPGTFGFGPSGCKPCECHLQGSV--SAFCDPI 848
Query: 231 KGQCECKDNVEGAQC 245
GQC C V QC
Sbjct: 849 TGQCHCFQGVYTRQC 863
Score = 123 (48.4 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 59/222 (26%), Positives = 84/222 (37%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHG---GHCLDCQGDRDGPNCEKCRDNYY-------QKSG 50
C C G ++ C + N G GHC+ C+ + G NCE+C D Y+ +
Sbjct: 283 CFCYGHASECA-PVDGVNEEVEGMVHGHCM-CRHNTKGLNCEQCMDFYHDLPWRPAEGRN 340
Query: 51 DNFCTACNCNPIGSLNLQCNSEGRCQCKPG-VTGDKCDRCDVNHYDFGEAGCKSCEC--- 106
N C CNCN S C+ + G V+G CD C H G C+ C+
Sbjct: 341 SNACKKCNCNEHSS---SCHFDMAVYLATGNVSGGVCDDCQ--HNTMGR-NCEQCKPFYY 394
Query: 107 -NPAGSVKNTPNCDSVKGQCESAQLSSRGRV---HTELRV-----QSRKNFDPAGNRIWD 157
+P +++ C+ C+ A S G + +T+ Q R G D
Sbjct: 395 QHPERDIRDPSLCEQCT--CDPAG-SQNGGICDSYTDFSAGLIAGQCRCKLYVEGEHC-D 450
Query: 158 LRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT---GDKCD 196
+ CK Y L C S C C P T G+ CD
Sbjct: 451 I--CKEGFYGLSAEDPFG--CKS---CACNPLGTIPGGNPCD 485
Score = 96 (38.9 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CEC+P GS+ + CD GQC+C+ NV G +C
Sbjct: 784 ACECDPQGSLSSV--CDPNGGQCQCRPNVVGRRC 815
Score = 43 (20.2 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 204 DFGEAGCKSCECNPAGSVKNT----PNCDSVKGQCEC 236
D A +C P S T PNC + +G+ +C
Sbjct: 1401 DLSAAAEMTCGTPPGASCSETECGGPNCRTDEGEKKC 1437
>UNIPROTKB|P25391 [details] [associations]
symbol:LAMA1 "Laminin subunit alpha-1" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] [GO:0005606 "laminin-1
complex" evidence=IDA;IPI] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=ISS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=TAS] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0030155
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005911
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
Pathway_Interaction_DB:syndecan_4_pathway PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 DrugBank:DB00015 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 EMBL:AP002409 EMBL:AP005062 EMBL:AP005210 EMBL:X58531
IPI:IPI00375294 PIR:S14458 RefSeq:NP_005550.2 UniGene:Hs.270364
ProteinModelPortal:P25391 SMR:P25391 DIP:DIP-29324N
MINT:MINT-6740485 STRING:P25391 PhosphoSite:P25391 PaxDb:P25391
PRIDE:P25391 Ensembl:ENST00000389658 GeneID:284217 KEGG:hsa:284217
UCSC:uc002knm.3 CTD:284217 GeneCards:GC18M006941 H-InvDB:HIX0014316
HGNC:HGNC:6481 HPA:CAB010179 MIM:150320 neXtProt:NX_P25391
PharmGKB:PA30270 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 InParanoid:P25391 KO:K05637 OMA:EPFYWRL
OrthoDB:EOG4K3KVB ChiTaRS:LAMA1 GenomeRNAi:284217 NextBio:94628
ArrayExpress:P25391 Bgee:P25391 CleanEx:HS_LAMA1
Genevestigator:P25391 GermOnline:ENSG00000101680 GO:GO:0005606
GO:GO:0005608 Uniprot:P25391
Length = 3075
Score = 307 (113.1 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 77/231 (33%), Positives = 111/231 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C DC+ + G C++C YY + C CNC+ GS++ C EG+C C PGV G
Sbjct: 919 GLC-DCKPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSDGCTDEGQCHCVPGVAG 977
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+CDRC Y + + C C+C P +NT CD G+C HT+ V+
Sbjct: 978 KRCDRCAHGFYAYQDGSCTPCDC-P--HTQNT--CDPETGECVCPP-------HTQ-GVK 1024
Query: 144 SRKNFDPAGNRIWDLR-RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
+ D G+ +D C+ L GS + +C+ G CQCK G CD+C +
Sbjct: 1025 CEECED--GHWGYDAEVGCQACNCSLV--GSTHHRCDVVTGHCQCKSKFGGRACDQCSLG 1080
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPN-----CDSVK--GQCECKDNVEGAQC 245
+ DF + C C+C+ G+ + N C V+ G C CK+NV G QC
Sbjct: 1081 YRDFPD--CVPCDCDLRGTSGDACNLEQGLCGCVEETGACPCKENVFGPQC 1129
Score = 266 (98.7 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 81/263 (30%), Positives = 117/263 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C C+G + C HG C+ C + G +CE+C +Y + C C
Sbjct: 742 CECHGHAAEC---------NVHGV-CIACAHNTTGVHCEQCLPGFYGEPSRGTPGDCQPC 791
Query: 58 NCN-PIGSLNLQ--CN-SEGR---CQ-CKPGVTGDKCDRCDVNHYDF----GEAGCKSCE 105
C I S N C+ ++G C C PG +G C+RC +Y GE+ C C+
Sbjct: 792 ACPLTIASNNFSPTCHLNDGDEVVCDWCAPGYSGAWCERCADGYYGNPTVPGES-CVPCD 850
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ +CDSV G+C L + H E + F G+ + + C+
Sbjct: 851 CSGNVDPSEAGHCDSVTGECLKC-LGNTDGAHCE---RCADGF--YGDAV-TAKNCRACE 903
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVK 222
+ GS + C+ E G C CKP VTG +CD+C +Y D G GC+ C C+ AGSV
Sbjct: 904 CHVK--GSHSAVCHLETGLCDCKPNVTGQQCDQCLHGYYGLDSGH-GCRPCNCSVAGSVS 960
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ C +GQC C V G +C
Sbjct: 961 D--GCTD-EGQCHCVPGVAGKRC 980
Score = 245 (91.3 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 70/231 (30%), Positives = 103/231 (44%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNC--NPIGSLNLQCNS-EGRC-QCK 78
C C G CE+C D YY G++ C C+C N S C+S G C +C
Sbjct: 816 CDWCAPGYSGAWCERCADGYYGNPTVPGES-CVPCDCSGNVDPSEAGHCDSVTGECLKCL 874
Query: 79 PGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
G C+RC Y G+A C++CEC+ GS ++ C G C+ + + G
Sbjct: 875 GNTDGAHCERCADGFY--GDAVTAKNCRACECHVKGS--HSAVCHLETGLCD-CKPNVTG 929
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDK 194
+ + + D +G+ R C GS++ C EG+C C PGV G +
Sbjct: 930 Q-QCDQCLHGYYGLD-SGH---GCRPCNCSV-----AGSVSDGCTDEGQCHCVPGVAGKR 979
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CDRC Y + + C C+C P +NT CD G+C C + +G +C
Sbjct: 980 CDRCAHGFYAYQDGSCTPCDC-P--HTQNT--CDPETGECVCPPHTQGVKC 1025
Score = 219 (82.2 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 61/199 (30%), Positives = 84/199 (42%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C C G C++C +Y D CT C+C P + N C+ E G C C P
Sbjct: 967 GQC-HCVPGVAGKRCDRCAHGFYAYQ-DGSCTPCDC-P-HTQNT-CDPETGECVCPPHTQ 1021
Query: 83 GDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G KC+ C+ H+ + E GC++C C+ GS + CD V G C+ + GR +
Sbjct: 1022 GVKCEECEDGHWGYDAEVGCQACNCSLVGSTHH--RCDVVTGHCQ-CKSKFGGRACDQCS 1078
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 200
+ R +F DLR D L G C E G C CK V G +C+ C
Sbjct: 1079 LGYR-DFPDCVPCDCDLRGTSGDACNLEQG---LCGCVEETGACPCKENVFGPQCNECRE 1134
Query: 201 NHYDF---GEAGCKSCECN 216
+ GC C C+
Sbjct: 1135 GTFALRADNPLGCSPCFCS 1153
Score = 194 (73.4 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 67/210 (31%), Positives = 91/210 (43%)
Query: 57 CNC--NPIG-SLNLQCNSEGRCQCKPGV--TGDKCDRCDVN------HYDFGEAGCKSCE 105
C C N G S N C + +PG +G+ C+ C+ + +YD A K
Sbjct: 290 CQCEHNTCGESCNRCCPGYHQQPWRPGTVSSGNTCEACNCHNKAKDCYYDESVAKQKK-S 348
Query: 106 CNPAGSVKNTP---NC-DSVKG-QCESAQLSSRGRVHTELRVQSRK----NFDPAGNRIW 156
N AG + NC + G CE+ + R H + N DP G+ +
Sbjct: 349 LNTAGQFRGGGVCINCLQNTMGINCETC-IDGYYRPHKVSPYEDEPCRPCNCDPVGS-LS 406
Query: 157 DLRRC-KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
+ C K D + H G G+C CK G TG+KCDRC + + D+ C SC C
Sbjct: 407 SV--CIKDDLHSDLHNGK------QPGQCPCKEGYTGEKCDRCQLGYKDYPT--CVSCGC 456
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
NP GS + P C G C CK+NVEG C
Sbjct: 457 NPVGSASDEP-CT---GPCVCKENVEGKAC 482
Score = 189 (71.6 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 47/137 (34%), Positives = 64/137 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-SGD-NFCTACN 58
C+CN S+ C D G CL+C + G +C+ C YY K +G + C C
Sbjct: 1403 CSCNNHSDTC--DPNT-------GKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCA 1453
Query: 59 C--NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C +P S + C EG RC C G G C+RC ++Y + C+ C+CNP
Sbjct: 1454 CPHSPPASFSPTCVLEGDHDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNP 1513
Query: 109 AGSVKNTPNCDSVKGQC 125
GSV +CD GQC
Sbjct: 1514 HGSVHG--DCDRTSGQC 1528
Score = 182 (69.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 40/126 (31%), Positives = 61/126 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+C N C D E G C+ C G CE+C D ++ + C ACNC+
Sbjct: 998 CDCPHTQNTC--DPET-------GECV-CPPHTQGVKCEECEDGHWGYDAEVGCQACNCS 1047
Query: 61 PIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
+GS + +C+ G CQCK G CD+C + + DF + C C+C+ G+ + C+
Sbjct: 1048 LVGSTHHRCDVVTGHCQCKSKFGGRACDQCSLGYRDFPD--CVPCDCDLRGTSGDA--CN 1103
Query: 120 SVKGQC 125
+G C
Sbjct: 1104 LEQGLC 1109
Score = 165 (63.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 50/188 (26%), Positives = 75/188 (39%)
Query: 75 CQCKPGVTGDKCDRCDVNHY--------DFGE----AGCKSCECNPAGSVKNTPNCDSVK 122
C C PG G C C ++ D G A C C CN ++ CD
Sbjct: 1362 CVCPPGTVGFSCQDCAPGYHRGKLPAGSDRGPRPLVAPCVPCSCN-----NHSDTCDPNT 1416
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLGHGGSLNLQCNSE 181
G+C + ++ G H + V + + D C + P + L+ + +
Sbjct: 1417 GKCLNCGDNTAGD-HCD--VCTSGYYGKVTGSASDCALCACPHSPPASFSPTCVLEGDHD 1473
Query: 182 GRCQ-CKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECK 237
RC C G G C+RC ++Y + C+ C+CNP GSV +CD GQC C+
Sbjct: 1474 FRCDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHG--DCDRTSGQCVCR 1531
Query: 238 DNVEGAQC 245
G +C
Sbjct: 1532 LGASGLRC 1539
Score = 162 (62.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 59/220 (26%), Positives = 94/220 (42%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQ---KSGDNF--------CTACNCNPIGSLNLQCN-SE 72
+C+ C G +C+ C Y++ +G + C C+CN C+ +
Sbjct: 1361 NCV-CPPGTVGFSCQDCAPGYHRGKLPAGSDRGPRPLVAPCVPCSCNNHSDT---CDPNT 1416
Query: 73 GRC-QCKPGVTGDKCDRCDVNHYD--FGEAG-CKSCECNPAGSVKNTPNCDSVKG----Q 124
G+C C GD CD C +Y G A C C C + +P C ++G +
Sbjct: 1417 GKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPASFSPTC-VLEGDHDFR 1475
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGR 183
C++ L G+ H E R S +P ++C D P HG S++ C+ + G+
Sbjct: 1476 CDACLLGYEGK-HCE-RCSSSYYGNPQTPG-GSCQKC--DCNP--HG-SVHGDCDRTSGQ 1527
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
C C+ G +G +CD C+ H E C SC+ G + N
Sbjct: 1528 CVCRLGASGLRCDECEPRHI-LMETDCVSCDDECVGVLLN 1566
Score = 121 (47.7 bits), Expect = 0.00080, P = 0.00079
Identities = 33/104 (31%), Positives = 43/104 (41%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC-QCKPG 80
HC +C G +CE C YY+ G F C C C+ + +CN G C C
Sbjct: 708 HC-ECPQGYTGTSCESCLSGYYRVDGILFGGICQPCECHGHAA---ECNVHGVCIACAHN 763
Query: 81 VTGDKCDRCDVNHY---DFGEAG-CKSCECNPAGSVKN--TPNC 118
TG C++C Y G G C+ C C P N +P C
Sbjct: 764 TTGVHCEQCLPGFYGEPSRGTPGDCQPCAC-PLTIASNNFSPTC 806
Score = 39 (18.8 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 6/14 (42%), Positives = 6/14 (42%)
Query: 234 CECKDNVEGAQCRS 247
CEC G C S
Sbjct: 709 CECPQGYTGTSCES 722
Score = 38 (18.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1 CNCNGFSNRCFFDKELYNRT 20
C C+G S+ C + E Y RT
Sbjct: 1150 CFCSGLSHLCS-ELEDYVRT 1168
>RGD|1307207 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10116 "Rattus
norvegicus" [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO] [GO:0005606 "laminin-1 complex"
evidence=IEA;ISO] [GO:0005608 "laminin-3 complex" evidence=IEA;ISO]
[GO:0005615 "extracellular space" evidence=IEA;ISO] [GO:0005911
"cell-cell junction" evidence=IEA;ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009888 "tissue development" evidence=ISO] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IEA;ISO] [GO:0043208 "glycosphingolipid binding"
evidence=IEA;ISO] [GO:0043256 "laminin complex" evidence=ISO]
[GO:0045198 "establishment of epithelial cell apical/basal
polarity" evidence=IEA;ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA;ISO]
[GO:0060445 "branching involved in salivary gland morphogenesis"
evidence=IEA;ISO] [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA;ISO] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 RGD:1307207 GO:GO:0005615 GO:GO:0030155
GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0031175 GO:GO:0060441 GO:GO:0060445 Pfam:PF02210
GO:GO:0045198 GO:GO:0045995 GO:GO:0005201 GO:GO:0043208
GO:GO:0002011 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
GO:GO:0005608 EMBL:AB425340 IPI:IPI00363534 RefSeq:NP_001101707.2
UniGene:Rn.2807 Ensembl:ENSRNOT00000023226 GeneID:316758
KEGG:rno:316758 UCSC:RGD:1307207 NextBio:671215 Uniprot:D4A409
Length = 3083
Score = 306 (112.8 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 72/230 (31%), Positives = 104/230 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C DC+ G C++C YY C CNC+ GS++ C EG+C C PGV+G
Sbjct: 926 GLC-DCKPYVTGQQCDQCLPGYYGLDTGLGCVPCNCSGEGSISDNCTEEGQCHCVPGVSG 984
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+CD+C Y F GC C+C +N NCD G+C + G + E +
Sbjct: 985 KQCDQCSHGFYAFQNGGCTPCDC---AHTQN--NCDPDSGECLCPP-HTHG-LKCEQCEE 1037
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNH 202
+ DP + C GS + QC+ G+C CK G G C +C + +
Sbjct: 1038 AFWGLDPEQG----CQACNCSVV-----GSTSPQCDVLSGQCSCKEGFGGQSCHQCSLGY 1088
Query: 203 YDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
F + C C+C+ G++ +T + C G C CK+NV G QC
Sbjct: 1089 RSFPD--CVPCDCDLRGTLADTCDLEQGLCSCTEDSGTCSCKENVLGPQC 1136
Score = 277 (102.6 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 83/262 (31%), Positives = 118/262 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C C+G S+ C +++ G C C + G +CE+C +Y + C C
Sbjct: 749 CECHGHSSEC----DIH------GICSGCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPC 798
Query: 58 NCN-PIGSLNLQ--CNSEGR----C-QCKPGVTGDKCDRCDVNHYDFGEAGCKSC-ECNP 108
C I S N C+ R C QC PG +G C+RC +Y +C CN
Sbjct: 799 ACPLSIDSNNFSPTCHLTDREEVVCDQCAPGYSGAWCERCADGYYGNPTVPGGTCVPCNC 858
Query: 109 AGSVK--NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+G+V +CDSV G+C ++ G H E + F G+ + + C+
Sbjct: 859 SGNVDPLEAGHCDSVTGECLKCLWNTDG-AHCE---RCADGF--YGDAV-TAKNCRACN- 910
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSVKN 223
GSL+ C+ E G C CKP VTG +CD+C +Y D G GC C C+ GS+ +
Sbjct: 911 -CHENGSLSGICHLETGLCDCKPYVTGQQCDQCLPGYYGLDTG-LGCVPCNCSGEGSISD 968
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
NC +GQC C V G QC
Sbjct: 969 --NCTE-EGQCHCVPGVSGKQC 987
Score = 232 (86.7 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 67/233 (28%), Positives = 96/233 (41%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G CL C + DG +CE+C D +Y + C ACNC+ GSL+ G C + G+
Sbjct: 875 GECLKCLWNTDGAHCERCADGFYGDAVTAKNCRACNCHENGSLS------GICHLETGL- 927
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
CD Y G+ C C G D+ G C S G +
Sbjct: 928 ------CDCKPYVTGQQ-CDQCLPGYYG-------LDTGLG-CVPCNCSGEGSISDNCTE 972
Query: 143 QSRKNFDPA-GNRIWDLRRCKRDTYPLGHGGSLNLQC----NS----EGRCQCKPGVTGD 193
+ + + P + D +C Y +GG C N+ G C C P G
Sbjct: 973 EGQCHCVPGVSGKQCD--QCSHGFYAFQNGGCTPCDCAHTQNNCDPDSGECLCPPHTHGL 1030
Query: 194 KCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KC++C+ + E GC++C C+ GS +P CD + GQC CK+ G C
Sbjct: 1031 KCEQCEEAFWGLDPEQGCQACNCSVVGST--SPQCDVLSGQCSCKEGFGGQSC 1081
Score = 226 (84.6 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 64/224 (28%), Positives = 90/224 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGDNFCTACN 58
CNC+G + + + G C C G C++C +Y Q G CT C+
Sbjct: 958 CNCSG-------EGSISDNCTEEGQC-HCVPGVSGKQCDQCSHGFYAFQNGG---CTPCD 1006
Query: 59 CNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTP 116
C C+ + G C C P G KC++C+ + E GC++C C+ GS +P
Sbjct: 1007 C---AHTQNNCDPDSGECLCPPHTHGLKCEQCEEAFWGLDPEQGCQACNCSVVGST--SP 1061
Query: 117 NCDSVKGQCESAQLSSRGRVHT-ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
CD + GQC + H L +S + P DLR DT L G
Sbjct: 1062 QCDVLSGQCSCKEGFGGQSCHQCSLGYRSFPDCVPCD---CDLRGTLADTCDLEQG---L 1115
Query: 176 LQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF---GEAGCKSCEC 215
C + G C CK V G +CD+C + GC C C
Sbjct: 1116 CSCTEDSGTCSCKENVLGPQCDKCRAGTFALRADNPLGCSPCFC 1159
Score = 212 (79.7 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 46/128 (35%), Positives = 60/128 (46%)
Query: 1 CNC--NG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTAC 57
CNC NG S C + G C DC+ G C++C YY C C
Sbjct: 909 CNCHENGSLSGICHLET---------GLC-DCKPYVTGQQCDQCLPGYYGLDTGLGCVPC 958
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
NC+ GS++ C EG+C C PGV+G +CD+C Y F GC C+C +N N
Sbjct: 959 NCSGEGSISDNCTEEGQCHCVPGVSGKQCDQCSHGFYAFQNGGCTPCDC---AHTQN--N 1013
Query: 118 CDSVKGQC 125
CD G+C
Sbjct: 1014 CDPDSGEC 1021
Score = 204 (76.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 52/139 (37%), Positives = 65/139 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
CNCN S+ C D E G CL+C+ G +CE C YY K GD CT
Sbjct: 1410 CNCNNHSDVC--DPET-------GKCLNCRDHTAGDHCELCTAGYYGKVIGLPGD--CTP 1458
Query: 57 CNC--NPIGSLNLQCNSEGR----CQ-CKPGVTGDKCDRCDVNHYDFGEAG---CKSCEC 106
C C +P S + C EG C C PG G C+RC ++ A C+ C+C
Sbjct: 1459 CTCPHHPPFSFSPTCVLEGDSGFWCDACLPGYEGQYCERCSAGYHGNPRAAGGSCQKCDC 1518
Query: 107 NPAGSVKNTPNCDSVKGQC 125
NP GSV + +CD GQC
Sbjct: 1519 NPQGSVHS--DCDRASGQC 1535
Score = 196 (74.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 67/239 (28%), Positives = 90/239 (37%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRCQ-CKPG 80
HC +C G +CE C YY+ G F C C C+ S +C+ G C C
Sbjct: 715 HC-ECPQGYTGTSCEACLPGYYRVDGILFGGICQPCECHGHSS---ECDIHGICSGCTHN 770
Query: 81 VTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN-TPNC---DSVKGQCESAQLSS 132
TGD C++C Y G C+ C C + N +P C D + C+
Sbjct: 771 TTGDHCEQCLPGFYGTPSRGTPGDCQPCACPLSIDSNNFSPTCHLTDREEVVCDQCAPGY 830
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPGV 190
G N G C + PL G C+S G C +C
Sbjct: 831 SGAWCERCADGYYGNPTVPGGTCVPCN-CSGNVDPLEAG-----HCDSVTGECLKCLWNT 884
Query: 191 TGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+RC Y G+A C++C C+ GS+ C G C+CK V G QC
Sbjct: 885 DGAHCERCADGFY--GDAVTAKNCRACNCHENGSLSGI--CHLETGLCDCKPYVTGQQC 939
Score = 175 (66.7 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 57/202 (28%), Positives = 76/202 (37%)
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY------DFGE------AGCKSCECNP 108
P G + LQ C C PG G C C ++ G A C C CN
Sbjct: 1358 PEGKVALQLEL---CVCPPGTAGHSCQDCAPGYHRGKLPESSGRGPRPLLAPCVPCNCNN 1414
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP- 167
V CD G+C + + + G H EL + D C +P
Sbjct: 1415 HSDV-----CDPETGKCLNCRDHTAGD-HCELCTAGY--YGKVIGLPGDCTPCTCPHHPP 1466
Query: 168 LGHGGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPAGSVKN 223
+ L+ +S C C PG G C+RC ++ A C+ C+CNP GSV +
Sbjct: 1467 FSFSPTCVLEGDSGFWCDACLPGYEGQYCERCSAGYHGNPRAAGGSCQKCDCNPQGSVHS 1526
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
+CD GQC CK G C
Sbjct: 1527 --DCDRASGQCVCKPGATGLHC 1546
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 64/237 (27%), Positives = 95/237 (40%)
Query: 26 CLDCQGDRDGPNCEKCRDNYY-----QKSGDNF------CTACNCNPIGSLNLQCNSE-G 73
C+ C G +C+ C Y+ + SG C CNCN + C+ E G
Sbjct: 1369 CV-CPPGTAGHSCQDCAPGYHRGKLPESSGRGPRPLLAPCVPCNCNNHSDV---CDPETG 1424
Query: 74 RC-QCKPGVTGDKCDRCDVNHYD--FGEAG-CKSCECNPAGSVKNTPNC--DSVKG-QCE 126
+C C+ GD C+ C +Y G G C C C +P C + G C+
Sbjct: 1425 KCLNCRDHTAGDHCELCTAGYYGKVIGLPGDCTPCTCPHHPPFSFSPTCVLEGDSGFWCD 1484
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQ 185
+ G+ N AG ++C D P G S++ C+ + G+C
Sbjct: 1485 ACLPGYEGQYCERCSAGYHGNPRAAGG---SCQKC--DCNPQG---SVHSDCDRASGQCV 1536
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
CKPG TG C+ C H E+ C SC+ G++ N + DS+ G N+ G
Sbjct: 1537 CKPGATGLHCEECLPRHI-LMESHCVSCDDECVGALLN--DLDSI-GDAVLSLNLAG 1589
Score = 171 (65.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 44/141 (31%), Positives = 63/141 (44%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D + N G GG C++C + G NCE C D YY+
Sbjct: 334 CNCHNKAKDCYYDNNVAKERKSLNTAGQYSGGGVCINCLQNTTGINCETCIDQYYRPHKV 393
Query: 51 ----DNFCTACNCNPIGSLNLQC----------NSEGRCQCKPGVTGDKCDRCDVNHYDF 96
D C C+C+P+GSL+ C N + QC P G D+CD + +
Sbjct: 394 SPYEDQPCRPCDCDPVGSLSSVCIKDDLHADLANGKWPGQC-PCRKGYAGDKCDRCQFGY 452
Query: 97 -GEAGCKSCECNPAGSVKNTP 116
G C C+C+ GSV P
Sbjct: 453 RGFPNCVPCDCSTVGSVNEDP 473
Score = 160 (61.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 67/237 (28%), Positives = 91/237 (38%)
Query: 24 GHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNP-----IGSLNLQCNSEGRCQC 77
GH C D + + +C N +S D C + P I S N QC C C
Sbjct: 281 GHASSCPWDEEAKQLQCQCEHNTCGESCDRCCPGFHQQPWRPGTISSSN-QCEE---CNC 336
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP---NC-DSVKG-QCESAQLSS 132
+K C +YD A + N AG NC + G CE+ +
Sbjct: 337 H-----NKAKDC---YYDNNVAKERK-SLNTAGQYSGGGVCINCLQNTTGINCETC-IDQ 386
Query: 133 RGRVHTELRVQSRK----NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP 188
R H + + + DP G+ + + C +D H N + G+C C+
Sbjct: 387 YYRPHKVSPYEDQPCRPCDCDPVGS-LSSV--CIKDDL---HADLANGKW--PGQCPCRK 438
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G GDKCDRC + F C C+C+ GSV P C C CK NVEG C
Sbjct: 439 GYAGDKCDRCQFGYRGF--PNCVPCDCSTVGSVNEDP-CTE---PCLCKKNVEGENC 489
Score = 134 (52.2 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 61/226 (26%), Positives = 91/226 (40%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNL--QCNSEGRC-QCKPGVTGDKCDRCDVNHY 94
CE+C N + K+ D + SLN Q + G C C TG C+ C +Y
Sbjct: 331 CEEC--NCHNKAKDCYYDNNVAKERKSLNTAGQYSGGGVCINCLQNTTGINCETCIDQYY 388
Query: 95 ------DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ + C+ C+C+P GS+ + C +K A L++ G+ + RK +
Sbjct: 389 RPHKVSPYEDQPCRPCDCDPVGSLSSV--C--IKDDLH-ADLAN-GKWPGQC--PCRKGY 440
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR---------CQCKPGVTGDKCDRCD 199
AG++ D RC+ Y G + C++ G C CK V G+ CDRC
Sbjct: 441 --AGDKC-D--RCQFG-YR-GFPNCVPCDCSTVGSVNEDPCTEPCLCKKNVEGENCDRCK 493
Query: 200 VNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
Y+ E GC C C V CDS+ N+ G
Sbjct: 494 PGFYNLKERNPEGCSECFCFGVSDV-----CDSLTWSVSQVTNMSG 534
Score = 83 (34.3 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 20/68 (29%), Positives = 32/68 (47%)
Query: 1 CNCNG-FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTAC 57
C+ G ++ C ++ L + T G C C+ + GP C+KCR + DN C+ C
Sbjct: 1099 CDLRGTLADTCDLEQGLCSCTEDSGTC-SCKENVLGPQCDKCRAGTFALRADNPLGCSPC 1157
Query: 58 NCNPIGSL 65
C + L
Sbjct: 1158 FCFGLSQL 1165
Score = 77 (32.2 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C C+G ++ C +D+E C C+ + G +C++C ++Q+ S N
Sbjct: 277 CICSGHASSCPWDEEAKQL-----QC-QCEHNTCGESCDRCCPGFHQQPWRPGTISSSNQ 330
Query: 54 CTACNCN 60
C CNC+
Sbjct: 331 CEECNCH 337
Score = 66 (28.3 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNC 59
CL C+ + +G NC++C+ +Y N C+ C C
Sbjct: 478 CL-CKKNVEGENCDRCKPGFYNLKERNPEGCSECFC 512
Score = 36 (17.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 5/14 (35%), Positives = 6/14 (42%)
Query: 234 CECKDNVEGAQCRS 247
CEC G C +
Sbjct: 716 CECPQGYTGTSCEA 729
>UNIPROTKB|F1MDD5 [details] [associations]
symbol:Bt.12589 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:DAAA02056591
EMBL:DAAA02056592 EMBL:DAAA02056593 EMBL:DAAA02056594
EMBL:DAAA02056595 EMBL:DAAA02056596 EMBL:DAAA02056597
EMBL:DAAA02056598 EMBL:DAAA02056599 EMBL:DAAA02056600
EMBL:DAAA02056601 EMBL:DAAA02056602 IPI:IPI00686590
Ensembl:ENSBTAT00000060991 ArrayExpress:F1MDD5 Uniprot:F1MDD5
Length = 3242
Score = 305 (112.4 bits), Expect = 3.0e-25, P = 3.0e-25
Identities = 84/268 (31%), Positives = 120/268 (44%)
Query: 1 CNCNGFSNRCFFDKEL------YNRTG---HGGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G S C++D ++ N G GG C++CQ + G NCEKC YY+ G
Sbjct: 259 CNCHGHSTDCYYDPDVERQQASLNIQGLYAGGGVCINCQHNTAGVNCEKCAKGYYRPYGI 318
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C C+C+P + + + S GRC C+P GD C+ C +Y F C
Sbjct: 319 PVHAPDGCIPCSCHPEHAEDCEQGS-GRCTCRPNFRGDHCEECAAGYYHFPV--CSRIPI 375
Query: 107 NPAGSVKNTPNCDSVKGQC-ESAQLSSRGRVHTELRVQSRKNFDPA-GNRIWDLRRCKRD 164
P + +P D V G + + G + Q R P G D R
Sbjct: 376 LPISTP--SPE-DPVAGDIIKGCDCNLEGVLPEICDAQGRCLCRPGVGGAQCDACRPGFY 432
Query: 165 TYPLGHG------GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
++P+ GS C+ G+C+C+PG+TG +CDRC DF S C+P
Sbjct: 433 SFPICQACQCSALGSYQTPCSPVTGQCECQPGITGQRCDRCLSGASDFPHCQGSSNVCDP 492
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AG+V DS G C+CK +VE C
Sbjct: 493 AGTV------DSSLGHCQCKLHVESPSC 514
Score = 300 (110.7 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 71/228 (31%), Positives = 110/228 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
G CL C+ G C+ CR +Y C AC C+ +GS C+ G+C+C+PG+T
Sbjct: 411 GRCL-CRPGVGGAQCDACRPGFYSFP---ICQACQCSALGSYQTPCSPVTGQCECQPGIT 466
Query: 83 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
G +CDRC DF S C+PAG+V ++ K ES S ++ L
Sbjct: 467 GQRCDRCLSGASDFPHCQGSSNVCDPAGTVDSSLGHCQCKLHVESPSCSICKPLYWNL-- 524
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVN 201
+++N P G C+ + G + +C +G C CK V GD CD C+
Sbjct: 525 -AKEN--PDG-----CSECR--CHVAGTMSGIG-ECGQLDGDCHCKSHVGGDSCDTCEDG 573
Query: 202 HYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
++ ++ GC+ C+C+ G+V TP C G C+C+++V G C+
Sbjct: 574 YFALEKSNYFGCQGCQCDIGGAV--TPVCSGRSGVCQCREHVVGKACQ 619
Score = 264 (98.0 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 71/240 (29%), Positives = 101/240 (42%)
Query: 8 NRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL 67
+R DK L T GG R C+ + + C C+P G+
Sbjct: 1122 HRKSLDKSLEFVTNCGGDSFYIDPQRASEFCKNSARSLVALYHEG-ALPCECHPAGATGH 1180
Query: 68 QCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
C+ EG +C C+P V G +C RC Y F CK C C C+ G+C
Sbjct: 1181 PCSPEGGQCPCRPHVIGRQCTRCQTGFYGFPH--CKPCSCGRR-------LCEETTGRCL 1231
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQ 185
L+ R + V S +F P + C R G G+ +C+ + G+C+
Sbjct: 1232 CPPLTVRPQCDV-CEVHSF-SFHPLAG--CEGCNCSRT----GTDGTTTPECDGDHGQCR 1283
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+P +TG +CDRC Y F E C C C+ G+ CD G C CK+NV+G +C
Sbjct: 1284 CRPRITGRQCDRCAPGFYRFPE--CLPCHCSRDGTEPGV--CDPGTGACLCKENVQGTEC 1339
Score = 217 (81.4 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 61/199 (30%), Positives = 86/199 (43%)
Query: 49 SGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
+GD C+CN G L C+++GRC C+PGV G +CD C Y F C++C+C+
Sbjct: 388 AGD-IIKGCDCNLEGVLPEICDAQGRCLCRPGVGGAQCDACRPGFYSFPI--CQACQCSA 444
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD--PAGNRIWDLRRCKRDTY 166
GS + TP C V GQCE Q G+ + + +F + + D +
Sbjct: 445 LGSYQ-TP-CSPVTGQCE-CQPGITGQ-RCDRCLSGASDFPHCQGSSNVCDPAGTVDSS- 499
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
LGH L S CKP + D GC C C+ AG++
Sbjct: 500 -LGHC-QCKLHVESPSCSICKPLYWNLAKENPD---------GCSECRCHVAGTMSGIGE 548
Query: 227 CDSVKGQCECKDNVEGAQC 245
C + G C CK +V G C
Sbjct: 549 CGQLDGDCHCKSHVGGDSC 567
Score = 208 (78.3 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 47/144 (32%), Positives = 66/144 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGD---RDGPNCEKCRDNYYQKSGDNFCTAC 57
CNCNG SNRC + G G C++C R G +CE+C++ Y + C C
Sbjct: 1591 CNCNGHSNRC--------QDG-SGICIECSSGMTIRGGEHCERCKEGSYWNTIHGSCRVC 1641
Query: 58 NCNPIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAG 110
C S C G +C CKPG TG +C+RC ++ FG C+ C CN G
Sbjct: 1642 PCPHSDSFATGCVVTGENVKCSCKPGYTGTRCERCAPGYFGNPQKFG-GSCQPCNCNSNG 1700
Query: 111 SVKNTPNCDSVKGQCESAQLSSRG 134
+ + CD + G C + + G
Sbjct: 1701 QLGS---CDPLNGDCINQEPKDSG 1721
Score = 185 (70.2 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 55/185 (29%), Positives = 76/185 (41%)
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA---G-CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C C P TGD C C +Y + G C C CN G + + +C S +
Sbjct: 1558 CACPPDYTGDSCQGCSPGYYRENKGLYTGWCVPCNCN--GHSNRCQDGSGICIECSSG-M 1614
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG---RCQCK 187
+ RG H E R + ++ R C P H S C G +C CK
Sbjct: 1615 TIRGGEHCE-RCKEGSYWNTIHG---SCRVC-----PCPHSDSFATGCVVTGENVKCSCK 1665
Query: 188 PGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNTPNCDSVKGQC---ECKDNV 240
PG TG +C+RC ++ FG C+ C CN G + + CD + G C E KD+
Sbjct: 1666 PGYTGTRCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLGS---CDPLNGDCINQEPKDSG 1721
Query: 241 EGAQC 245
G +C
Sbjct: 1722 PGEEC 1726
Score = 158 (60.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 48/186 (25%), Positives = 76/186 (40%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN--CNPIGSLNLQCNSEGRCQCKPGV 81
G C +CQ G C++C S C + C+P G+++ +S G CQCK V
Sbjct: 457 GQC-ECQPGITGQRCDRCLSG---ASDFPHCQGSSNVCDPAGTVD---SSLGHCQCKLHV 509
Query: 82 TGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
C C +++ + GC C C+ AG++ C + G C S G
Sbjct: 510 ESPSCSICKPLYWNLAKENPDGCSECRCHVAGTMSGIGECGQLDGDCHCK--SHVGGDSC 567
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
+ F + + + C+ D GG++ C+ G CQC+ V G C R
Sbjct: 568 DTCEDGY--FALEKSNYFGCQGCQCDI-----GGAVTPVCSGRSGVCQCREHVVGKACQR 620
Query: 198 CDVNHY 203
+ N+Y
Sbjct: 621 PENNYY 626
Score = 157 (60.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 55/199 (27%), Positives = 74/199 (37%)
Query: 34 DGPNCEKCRDNYYQKSGDNFCTAC--------NCNPIGSLNLQCN-SEGRCQCKPGVTGD 84
+G C CR + + CT C +C P C + GRC C P
Sbjct: 1185 EGGQCP-CRPHVIGRQ----CTRCQTGFYGFPHCKPCSCGRRLCEETTGRCLCPPLTVRP 1239
Query: 85 KCDRCDVNHYDFGE-AGCKSCECNPAGSV-KNTPNCDSVKGQCESAQLSSRGRVHTELRV 142
+CD C+V+ + F AGC+ C C+ G+ TP CD GQC R +
Sbjct: 1240 QCDVCEVHSFSFHPLAGCEGCNCSRTGTDGTTTPECDGDHGQC---------RCRPRITG 1290
Query: 143 QSRKNFDPAGNRIWDLR--RCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCD 199
+ P R + C RD G C+ G C CK V G +C+ C
Sbjct: 1291 RQCDRCAPGFYRFPECLPCHCSRDGTEPG-------VCDPGTGACLCKENVQGTECNMCR 1343
Query: 200 VNHYDFGEA---GCKSCEC 215
+ A GC SC C
Sbjct: 1344 EGSFYLDPANPKGCTSCFC 1362
Score = 139 (54.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 66/245 (26%), Positives = 99/245 (40%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEG-----RCQCK 78
GH + + RD P R YY + C CN G + CN+ RC+C+
Sbjct: 173 GHLIS-KAQRD-PTVT--RRYYYSIKDISIGGRCVCN--GHAEV-CNANNPEKLFRCECQ 225
Query: 79 PGVTGDKCDRCDV--NHYDFGEA-GCKSCECNPAGSVKNTPNCD-SVKGQCESAQLSSRG 134
GD CDRC + N + A G +S EC ++ +C + + A L+ +G
Sbjct: 226 HNTCGDTCDRCCMGYNQRRWRPATGKQSNECEACNCHGHSTDCYYDPDVERQQASLNIQG 285
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY-PLG---HG--GSLNLQCNSE------- 181
++ V + AG + +C + Y P G H G + C+ E
Sbjct: 286 -LYAGGGVCINCQHNTAGV---NCEKCAKGYYRPYGIPVHAPDGCIPCSCHPEHAEDCEQ 341
Query: 182 --GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG--SVKNTPNCDSVKGQCECK 237
GRC C+P GD C+ C +Y F C P S ++ D +KG C+C
Sbjct: 342 GSGRCTCRPNFRGDHCEECAAGYYHFPV--CSRIPILPISTPSPEDPVAGDIIKG-CDC- 397
Query: 238 DNVEG 242
N+EG
Sbjct: 398 -NLEG 401
Score = 133 (51.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 46/181 (25%), Positives = 76/181 (41%)
Query: 29 CQGDRDGPNCEKCRDNYYQKS-G--DNFCTACNCNPIGSLNLQCNSEGRC-QCKPGVT-- 82
C D G +C+ C YY+++ G +C CNCN G N + G C +C G+T
Sbjct: 1560 CPPDYTGDSCQGCSPGYYRENKGLYTGWCVPCNCN--GHSNRCQDGSGICIECSSGMTIR 1617
Query: 83 -GDKCDRC-DVNHYDFGEAGCKSCECNPAGSVKN--TPNCDSVKGQCESAQLSSRGRVHT 138
G+ C+RC + ++++ C+ C C + S ++VK C+ +R
Sbjct: 1618 GGEHCERCKEGSYWNTIHGSCRVCPCPHSDSFATGCVVTGENVKCSCKPGYTGTRCERCA 1677
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTY-PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
+ + F G+ + C ++ LG LN C ++ PG D CD
Sbjct: 1678 PGYFGNPQKF--GGS----CQPCNCNSNGQLGSCDPLNGDCINQEPKDSGPGEECDDCDS 1731
Query: 198 C 198
C
Sbjct: 1732 C 1732
Score = 69 (29.3 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 1 CNCNGFSNRCFFD--KELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-----SG--D 51
C CNG + C + ++L+ C +CQ + G C++C Y Q+ +G
Sbjct: 202 CVCNGHAEVCNANNPEKLFR-------C-ECQHNTCGDTCDRCCMGYNQRRWRPATGKQS 253
Query: 52 NFCTACNCN 60
N C ACNC+
Sbjct: 254 NECEACNCH 262
Score = 64 (27.6 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDN--YYQKSGDNFCTACNC 59
G CL C+ + G C CR+ Y + CT+C C
Sbjct: 1326 GACL-CKENVQGTECNMCREGSFYLDPANPKGCTSCFC 1362
>UNIPROTKB|F1MC13 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090002 "establishment of protein localization to
plasma membrane" evidence=IEA] [GO:0060445 "branching involved in
salivary gland morphogenesis" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005178 "integrin binding" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0045995 "regulation
of embryonic development" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 EMBL:DAAA02036259 EMBL:DAAA02036256
EMBL:DAAA02036257 EMBL:DAAA02036258 IPI:IPI00717460
Ensembl:ENSBTAT00000003981 Uniprot:F1MC13
Length = 3656
Score = 305 (112.4 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 72/226 (31%), Positives = 104/226 (46%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL C+ + +GP+C++CR Y+ G C AC C+P GS++ C + G C+C G G
Sbjct: 586 GRCL-CRPEFNGPHCDRCRLGYH---GYPECHACACDPRGSVDQLCGAGGLCRCCSGYAG 641
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C C + F + C C C+P GS+ CD GQC S R RV T LR
Sbjct: 642 STCQECSPGFHGFPD--CAPCHCSPEGSLHAA--CDPHSGQC-----SCRPRV-TGLRC- 690
Query: 144 SRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
D ++ C+ + +P G + + ++ C C+ V G CDRC
Sbjct: 691 -----DMCVPGAYNFPYCEAGSCHPAGLAPADRVPPEAQAPCTCRAHVEGPSCDRCKPGF 745
Query: 203 YDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ + GC C C+P G++ C GQC CK +V G C
Sbjct: 746 WGLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNGQCFCKPHVCGQTC 791
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 81/264 (30%), Positives = 113/264 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C C+G S+RC G G C+ CQ + +G +CE+C+ + + ++ C +C
Sbjct: 1824 CQCHGHSDRCL--------PG-SGVCIGCQHNTEGDHCERCQAGFVRTGSEDPAAPCISC 1874
Query: 58 NCN---PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECN 107
C P + C G +C CKPG G C+RC + G + C+ C+C+
Sbjct: 1875 PCPLAVPSNNFATGCILRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSS-CQPCDCS 1933
Query: 108 PAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQS-RKNFDPAGNRIWDLRRCKR-D 164
G +CD + G C + G R +S F GN + C R D
Sbjct: 1934 GNGDPNMLFSDCDPLTGTCRGCLRHTTGP-----RCESCAPGF--YGNALLP-GNCTRCD 1985
Query: 165 TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVK 222
P G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 1986 CSPCGTEA-----CDPHSGHCLCKAGVTGLRCDRCQEGHFGFEGCEGCRPCACGPAAE-- 2038
Query: 223 NTPNCDSVKGQCECKDNVEGAQCR 246
+ C GQC C+ G QCR
Sbjct: 2039 -SSECHPQSGQCHCRPGTGGPQCR 2061
Score = 284 (105.0 bits), Expect = 5.8e-23, P = 5.8e-23
Identities = 74/233 (31%), Positives = 109/233 (46%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP 79
G GG C C G G C++C ++ G C C+C+P GSL+ C+ G+C C+P
Sbjct: 628 GAGGLCRCCSGYA-GSTCQECSPGFH---GFPDCAPCHCSPEGSLHAACDPHSGQCSCRP 683
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
VTG +CD C Y+F C++ C+PAG P D V + + A + R V
Sbjct: 684 RVTGLRCDMCVPGAYNFPY--CEAGSCHPAGLA---P-ADRVPPEAQ-APCTCRAHVEGP 736
Query: 140 LRVQSRKNF---DPAGNRIWDLRRCKRDTYPLGH-GGSLNLQCNSEGRCQCKPGVTGDKC 195
+ + F P+ RC D P G GG+ Q + G+C CKP V G C
Sbjct: 737 SCDRCKPGFWGLSPSNPE--GCTRCNCD--PRGTLGGAAQCQLGN-GQCFCKPHVCGQTC 791
Query: 196 DRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C + +A GC+SC C+ G++ + C+ G C C+ N +G+ C
Sbjct: 792 AACKDGFFGLDQADYFGCRSCRCDVGGALGQS--CELRTGACMCRPNTQGSTC 842
Score = 229 (85.7 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 68/211 (32%), Positives = 85/211 (40%)
Query: 1 CNC--NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-DNFCTAC 57
C+C NG N F D + G C C GP CE C +Y + CT C
Sbjct: 1930 CDCSGNGDPNMLFSDCDPLT-----GTCRGCLRHTTGPRCESCAPGFYGNALLPGNCTRC 1984
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNTP 116
+C+P G+ +S G C CK GVTG +CDRC H+ F G GC+ C C PA +
Sbjct: 1985 DCSPCGTEACDPHS-GHCLCKAGVTGLRCDRCQEGHFGFEGCEGCRPCACGPAAE---SS 2040
Query: 117 NCDSVKGQCE------SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
C GQC Q H L Q + G DL R T P G
Sbjct: 2041 ECHPQSGQCHCRPGTGGPQCRECAPGHWGLPEQGCRRCQCQGGHC-DLHT-GRCTCPPGL 2098
Query: 171 GGSLNLQCNSEGRCQCK--PGVTGDKCDRCD 199
GG C+ + + PG G C+ CD
Sbjct: 2099 GGERCETCSHQHQVPVPGGPGGHGVHCEVCD 2129
Score = 216 (81.1 bits), Expect = 9.6e-16, P = 9.6e-16
Identities = 66/239 (27%), Positives = 101/239 (42%)
Query: 23 GGH--CLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNCNPIGSLNL---QCNS-EG 73
GG CL C+ G +CE+C ++ G + C C+C+ G N+ C+ G
Sbjct: 1893 GGRTQCL-CKPGYAGASCERCAPGFFGNPLVLGSS-CQPCDCSGNGDPNMLFSDCDPLTG 1950
Query: 74 RCQ-CKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C+ C TG +C+ C Y C C+C+P G T CD G C L
Sbjct: 1951 TCRGCLRHTTGPRCESCAPGFYGNALLPGNCTRCDCSPCG----TEACDPHSGHC----L 2002
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL-NLQCNSE-GRCQCKP 188
G T LR + G+ + C+ P G + + +C+ + G+C C+P
Sbjct: 2003 CKAGV--TGLRCDRCQE----GH--FGFEGCE-GCRPCACGPAAESSECHPQSGQCHCRP 2053
Query: 189 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
G G +C C H+ E GC+ C+C G +CD G+C C + G +C +
Sbjct: 2054 GTGGPQCRECAPGHWGLPEQGCRRCQCQ-GG------HCDLHTGRCTCPPGLGGERCET 2105
Score = 195 (73.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 65/250 (26%), Positives = 102/250 (40%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDC-QGDRDGPNCEKCRDNYYQKSGDNFCTA----- 56
C + RC+ N TG C C +G D P+C + + +G+ A
Sbjct: 422 CEDLTGRCYCRP---NFTG--ARCDACAEGFTDFPHCYPVPSSSHNDTGEQVLPAGHIVN 476
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
C+C+ G+ C + + + C++ F GC+ C+C+ G V T
Sbjct: 477 CDCSAAGTQGNACRKDPQVGHCVCKPNFQGTHCELCAPGFYGPGCQPCQCSSPGVVDGT- 535
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
CD GQC + + G + +F P + L C P+G +L
Sbjct: 536 -CDRDSGQC-TCRTGFEGAA-CDRCAPGYFHF-P----LCQLCGCS----PVG---TLPE 580
Query: 177 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
C+ GRC C+P G CDRC + ++ + E C +C C+P GSV C + G C C
Sbjct: 581 GCDDAGRCLCRPEFNGPHCDRCRLGYHGYPE--CHACACDPRGSVDQL--CGA-GGLCRC 635
Query: 237 KDNVEGAQCR 246
G+ C+
Sbjct: 636 CSGYAGSTCQ 645
Score = 177 (67.4 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 58/219 (26%), Positives = 92/219 (42%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR-CQC-KPGVTGDKCD----RCDVNH 93
+C + Y S + C + SL+L N+ R C C + G C+ +C
Sbjct: 1368 QCATHGYHISPSSSSAFCR-SAATSLSLFYNNGARPCGCHEVGAMSPTCEPFGGQCPCRA 1426
Query: 94 YDFGEAGCKSCECNPAGSVKNTPN------CDSVKGQCESAQLSSRGRVHTELRVQSRKN 147
+ G C C G P CD + GQC + + + V +
Sbjct: 1427 HVIGR-DCSRCATGYWGFPSCRPCDCSGRLCDELTGQC----ICPPRTIPPDCLVCQPQT 1481
Query: 148 FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFG 206
F + + C P G ++ C+++ G+C+C+P V G +CD C + F
Sbjct: 1482 F--GCHPLVGCEECNCSG-P-GVQELMDPTCDADSGQCKCRPNVAGRRCDTCAPGFHGF- 1536
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+C+ AGS T CD + GQC CK+NV+G +C
Sbjct: 1537 -PSCRPCDCHEAGSAPGT--CDPLTGQCYCKENVQGPRC 1572
Score = 176 (67.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 49/189 (25%), Positives = 71/189 (37%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL---NLQCNSEGRCQCK 78
H G C C+ G C+ C Y +C A +C+P G + ++ C C+
Sbjct: 675 HSGQC-SCRPRVTGLRCDMCVPGAYNFP---YCEAGSCHPAGLAPADRVPPEAQAPCTCR 730
Query: 79 PGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR 135
V G CDRC + + GC C C+P G++ C GQC + G+
Sbjct: 731 AHVEGPSCDRCKPGFWGLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNGQC-FCKPHVCGQ 789
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDK 194
+ D A + R C+ D GG+L C G C C+P G
Sbjct: 790 TCAACK-DGFFGLDQAD--YFGCRSCRCDV-----GGALGQSCELRTGACMCRPNTQGST 841
Query: 195 CDRCDVNHY 203
C +HY
Sbjct: 842 CSEPAQDHY 850
Score = 173 (66.0 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 37/111 (33%), Positives = 50/111 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC G ++ C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 341 CNCYGHAHDCYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSPDH 400
Query: 49 --SGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF 96
+ C CNC + C GRC C+P TG +CD C DF
Sbjct: 401 PLDSPHACRRCNCES-DFTDGTCEDLTGRCYCRPNFTGARCDACAEGFTDF 450
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 35/106 (33%), Positives = 52/106 (49%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQ---CNSE-GRCQCKP 79
G C+ C P+C C+ + C CNC+ G L C+++ G+C+C+P
Sbjct: 1461 GQCI-CPPRTIPPDCLVCQPQTFGCHPLVGCEECNCSGPGVQELMDPTCDADSGQCKCRP 1519
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
V G +CD C + F C+ C+C+ AGS T CD + GQC
Sbjct: 1520 NVAGRRCDTCAPGFHGF--PSCRPCDCHEAGSAPGT--CDPLTGQC 1561
Score = 136 (52.9 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 48/183 (26%), Positives = 67/183 (36%)
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C C GD C C +Y G C P ++ C G C Q ++ G
Sbjct: 1791 CMCPANYLGDSCQECAPGYYR-DVKGLFLGRCIPCQCHGHSDRCLPGSGVCIGCQHNTEG 1849
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-HGGSLNLQCNSEG---RCQCKPGV 190
H E R Q+ F G+ C PL + C G +C CKPG
Sbjct: 1850 D-HCE-RCQA--GFVRTGSED-PAAPCISCPCPLAVPSNNFATGCILRGGRTQCLCKPGY 1904
Query: 191 TGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNT-PNCDSVKGQCE-CKDNVEGAQ 244
G C+RC + G + C+ C+C+ G +CD + G C C + G +
Sbjct: 1905 AGASCERCAPGFFGNPLVLGSS-CQPCDCSGNGDPNMLFSDCDPLTGTCRGCLRHTTGPR 1963
Query: 245 CRS 247
C S
Sbjct: 1964 CES 1966
Score = 135 (52.6 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 47/169 (27%), Positives = 68/169 (40%)
Query: 54 CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGS 111
C C+C+ G L C+ G+C C P C C + GC+ C C+ G
Sbjct: 1446 CRPCDCS--GRL---CDELTGQCICPPRTIPPDCLVCQPQTFGCHPLVGCEECNCSGPGV 1500
Query: 112 VK-NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
+ P CD+ GQC+ + + GR R + P + R C D +
Sbjct: 1501 QELMDPTCDADSGQCK-CRPNVAGR-----RCDTCA---PGFHGFPSCRPC--DCH---E 1546
Query: 171 GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GS C+ G+C CK V G +CD+C + + A GC C C
Sbjct: 1547 AGSAPGTCDPLTGQCYCKENVQGPRCDQCRLGTFSLDAANPKGCTRCFC 1595
Score = 64 (27.6 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSLNLQCNS 71
G C C+ + GP C++CR + N CT C C G+ + +C S
Sbjct: 1559 GQCY-CKENVQGPRCDQCRLGTFSLDAANPKGCTRCFC--FGATD-RCRS 1604
Score = 52 (23.4 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 29 CQGDRDGPNCEKCRDNYYQK-----SGD--NFCTACNC 59
CQ + G +C++C + Q+ + D N C +CNC
Sbjct: 306 CQHNTCGGSCDRCCPGFNQQPWRPATTDSANECQSCNC 343
>RGD|1306311 [details] [associations]
symbol:Lamb1 "laminin, beta 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005178 "integrin
binding" evidence=ISO] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005605 "basal lamina" evidence=ISO] [GO:0005606 "laminin-1
complex" evidence=ISO] [GO:0005607 "laminin-2 complex"
evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007162 "negative regulation of cell adhesion" evidence=ISO]
[GO:0007566 "embryo implantation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016477 "cell migration"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030335 "positive regulation of cell migration" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0043208
"glycosphingolipid binding" evidence=ISO] [GO:0043256 "laminin
complex" evidence=ISO] [GO:0043257 "laminin-8 complex"
evidence=ISO] [GO:0043259 "laminin-10 complex" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0070062 "extracellular vesicular exosome" evidence=ISO]
RGD:1306311 GO:GO:0048471 GO:GO:0005615 GO:GO:0016477 GO:GO:0007162
GO:GO:0030335 GO:GO:0031012 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 OrthoDB:EOG44BB1B GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 IPI:IPI00365542
Ensembl:ENSRNOT00000008321 UCSC:RGD:1306311 ArrayExpress:D3ZQN7
Uniprot:D3ZQN7
Length = 1834
Score = 272 (100.8 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 81/269 (30%), Positives = 107/269 (39%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
C CNG + C D G CL CQ G NCE+C YY SGD+ C
Sbjct: 915 CQCNGHAEDC--DTVT-------GECLSCQDYTTGHNCERCLAGYYGDPIIGSGDH-CRP 964
Query: 57 CNCNPIG-----SLNLQCNSEG-----RCQCKPGVTGDKCDRCDVNHY----DFGEAGCK 102
C C P G C + C C PG G +CD C ++ DFG C+
Sbjct: 965 CPC-PDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDGCASGYFGNPSDFG-GSCQ 1022
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
C+C+ + CD G+C + G H + Q D D R+C
Sbjct: 1023 PCQCHHNIDTTDPEACDKETGRCLKCLYHTEGD-HCQF-CQHGYYGDALRQ---DCRKCV 1077
Query: 163 RDTYPLG----HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECN 216
+ Y LG H + C+ + G+C C P V G CDRC + + GC+ C CN
Sbjct: 1078 CN-Y-LGTVREHCNGSDCHCDKTTGQCSCLPNVIGQNCDRCAPHTWQLASGTGCEPCNCN 1135
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
S P+C+ GQC+C G C
Sbjct: 1136 AVHSFG--PSCNEFTGQCQCMPGFGGRTC 1162
Score = 259 (96.2 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 72/236 (30%), Positives = 97/236 (41%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP-IGSLNLQ-CNSE-GRC-QCKP 79
C+ C G C+ C Y+ D C C C+ I + + + C+ E GRC +C
Sbjct: 992 CV-CDPGYIGSRCDGCASGYFGNPSDFGGSCQPCQCHHNIDTTDPEACDKETGRCLKCLY 1050
Query: 80 GVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPN-----CDSVKGQCESAQLSSR 133
GD C C +Y D C+ C CN G+V+ N CD GQC S +
Sbjct: 1051 HTEGDHCQFCQHGYYGDALRQDCRKCVCNYLGTVREHCNGSDCHCDKTTGQC-SCLPNVI 1109
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRR---CKRDTYPLGHGGSLNLQCNS-EGRCQCKPG 189
G+ N D W L C+ H S CN G+CQC PG
Sbjct: 1110 GQ-----------NCDRCAPHTWQLASGTGCEPCNCNAVH--SFGPSCNEFTGQCQCMPG 1156
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C C + + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1157 FGGRTCSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1210
Score = 250 (93.1 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 68/236 (28%), Positives = 103/236 (43%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
+GG C C+ + G C +C + G N C C+C+ GS++ C++ G+C C G
Sbjct: 836 NGGQC-QCRPNVVGRTCNRCAPGTFG-FGPNGCKPCDCHLQGSVSAFCDAVTGQCHCFQG 893
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+ +CDRC + F C+ C+CN G ++ CD+V G+C S Q + G H
Sbjct: 894 IYARQCDRCLPGFWGF--PSCQPCQCN--GHAED---CDTVTGECLSCQDYTTG--HNCE 944
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG-----RCQCKPGVTGDKC 195
R + DP R C P G C + C C PG G +C
Sbjct: 945 RCLAGYYGDPIIGSGDHCRPCPCPDGP-DSGRQFARSCYQDPVTLQLACVCDPGYIGSRC 1003
Query: 196 DRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
D C ++ DFG C+ C+C+ + CD G+C +C + EG C+
Sbjct: 1004 DGCASGYFGNPSDFG-GSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQ 1058
Score = 236 (88.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 66/225 (29%), Positives = 101/225 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 54 CTACNCNPIGSLNLQ-CNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C C+P GS N C+ G+C+CK V G++CD C YD
Sbjct: 443 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPFG 502
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW----DLR 159
C+ + P + C+S G + + R+ + + D + W DL
Sbjct: 503 CKSCACNPLGTIPGGNP----CDS----ETGYCYCK-RLVTGQRCDQCLPQHWGLSNDLD 553
Query: 160 RCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C+ LG G+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 554 GCRPCDCDLG--GALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 596
Score = 233 (87.1 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 63/203 (31%), Positives = 88/203 (43%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--------GRC 75
G CL C +G +C+ C+ YY + C C CN +G++ CN G+C
Sbjct: 1043 GRCLKCLYHTEGDHCQFCQHGYYGDALRQDCRKCVCNYLGTVREHCNGSDCHCDKTTGQC 1102
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC + + GC+ C CN S P+C+ GQC+ G
Sbjct: 1103 SCLPNVIGQNCDRCAPHTWQLASGTGCEPCNCNAVHSFG--PSCNEFTGQCQCMP-GFGG 1159
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E + + F G+ + R C D P G QC+ S G+C C GV G
Sbjct: 1160 RTCSECQ----ELF--WGDPDVECRACDCD--PRGIETP---QCDQSTGQCVCVEGVEGP 1208
Query: 194 KCDRCDVNHYDFGEAGCKSC-EC 215
+CD+C Y C C +C
Sbjct: 1209 RCDKC-TRGYSGVFPDCTPCHQC 1230
Score = 210 (79.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 68/231 (29%), Positives = 101/231 (43%)
Query: 33 RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDV 91
R+ C+KC N + S C+ + L S G C C+ G C++C
Sbjct: 375 RNSNACKKCNCNEHSSS-------CHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKP 427
Query: 92 NHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
++ E C+ C C+PAGS +N CD G + + G+ +L V+
Sbjct: 428 FYFQHPERDIRDPNLCEPCTCDPAGS-ENGGICD---GYTDFSVGLIAGQCRCKLHVEGE 483
Query: 146 KNFDPAGNRIWDLRR-----CKRDTY-PLGH--GGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ D +DL CK PLG GG+ C+SE G C CK VTG +CD
Sbjct: 484 R-CDVCKEGFYDLSAEDPFGCKSCACNPLGTIPGGN---PCDSETGYCYCKRLVTGQRCD 539
Query: 197 RCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C H+ GC+ C+C+ G++ N+ C GQC C ++ G QC
Sbjct: 540 QCLPQHWGLSNDLDGCRPCDCDLGGALNNS--CSEDSGQCSCLPHMIGRQC 588
Score = 191 (72.3 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 39/97 (40%), Positives = 53/97 (54%)
Query: 36 PNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 798 PMTDVCRNIIFSISALIHQAGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 857
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+ FG GCK C+C+ GSV + CD+V GQC Q
Sbjct: 858 TFGFGPNGCKPCDCHLQGSV--SAFCDAVTGQCHCFQ 892
Score = 181 (68.8 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 33/75 (44%), Positives = 44/75 (58%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GSV + CD+V
Sbjct: 827 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSV--SAFCDAV 884
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 885 TGQCHCFQGIYARQC 899
Score = 136 (52.9 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 64/224 (28%), Positives = 90/224 (40%)
Query: 1 CNCNGFSNRCF----FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------QKS 49
C C G ++ C F++E+ HG HC+ C+ + G NCE C D Y+ +
Sbjct: 319 CFCYGHASECAPVDGFNEEVEGMV-HG-HCM-CRHNTKGLNCELCMDFYHDLPWRPAEGR 375
Query: 50 GDNFCTACNCNPIGSLNLQCNSEGRCQCKPG-VTGDKCDRCDVNHYDFGEAGCKSCEC-- 106
N C CNCN S C+ + G V+G CD C H G C+ C+
Sbjct: 376 NSNACKKCNCNEHSS---SCHFDMAVFLATGNVSGGVCDNCQ--HNTMGR-NCEQCKPFY 429
Query: 107 --NPAGSVKNTPN-CDSVKGQCESAQLSSRGRV---HTELRV-----QSRKNFDPAGNRI 155
+P +++ PN C+ C+ A S G + +T+ V Q R G R
Sbjct: 430 FQHPERDIRD-PNLCEPCT--CDPAG-SENGGICDGYTDFSVGLIAGQCRCKLHVEGERC 485
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT---GDKCD 196
D+ CK Y L C S C C P T G+ CD
Sbjct: 486 -DV--CKEGFYDLSAEDPFG--CKS---CACNPLGTIPGGNPCD 521
Score = 96 (38.9 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+AG +CEC+P GS+ + CD GQC+C+ NV G C
Sbjct: 816 QAGL-ACECDPQGSLSSV--CDPNGGQCQCRPNVVGRTC 851
Score = 38 (18.4 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 204 DFGEAGCKSCECNPAGSVKNT----PNCDSVKGQCEC 236
D A +C +P + PNC + +G+ +C
Sbjct: 1437 DLSAAAEMTCGTHPGADCSESECGGPNCRTDEGEKKC 1473
>MGI|MGI:96743 [details] [associations]
symbol:Lamb1 "laminin B1" species:10090 "Mus musculus"
[GO:0005178 "integrin binding" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=IDA]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005607
"laminin-2 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IDA] [GO:0007566
"embryo implantation" evidence=IMP] [GO:0007611 "learning or
memory" evidence=NAS] [GO:0016477 "cell migration" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0030335 "positive
regulation of cell migration" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0031175 "neuron projection
development" evidence=ISO;IDA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=ISO] [GO:0042476
"odontogenesis" evidence=ISO] [GO:0043208 "glycosphingolipid
binding" evidence=IDA] [GO:0043256 "laminin complex" evidence=IDA]
[GO:0043257 "laminin-8 complex" evidence=ISO] [GO:0043259
"laminin-10 complex" evidence=ISO;IPI] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:96743 GO:GO:0048471
GO:GO:0016477 GO:GO:0007155 PROSITE:PS00022 GO:GO:0007611
Reactome:REACT_127416 GO:GO:0005178 PROSITE:PS01186 GO:GO:0007162
GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0031175 GO:GO:0042476
GO:GO:0007566 InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384
OrthoDB:EOG44BB1B GO:GO:0005607 GO:GO:0043257
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 ChiTaRS:LAMB1 EMBL:M15525 EMBL:CR974423
EMBL:CT571245 EMBL:X05212 IPI:IPI00988644 PIR:A26413
UniGene:Mm.172674 PDB:4AQS PDBsum:4AQS ProteinModelPortal:P02469
SMR:P02469 MINT:MINT-1206337 STRING:P02469 PhosphoSite:P02469
PaxDb:P02469 PRIDE:P02469 Ensembl:ENSMUST00000169088
InParanoid:P02469 Bgee:P02469 CleanEx:MM_LAMB1-1
Genevestigator:P02469 GermOnline:ENSMUSG00000002900 Uniprot:P02469
Length = 1786
Score = 276 (102.2 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 83/270 (30%), Positives = 109/270 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
C CNG + C D G CL CQ G NCE+C YY SGD+ C
Sbjct: 867 CQCNGHALDC--DTVT-------GECLSCQDYTTGHNCERCLAGYYGDPIIGSGDH-CRP 916
Query: 57 CNCNPIG-----SLNLQCNSEG-----RCQCKPGVTGDKCDRCDVNHY----DFGEAGCK 102
C C P G C + C C PG G +CD C + DFG C+
Sbjct: 917 CPC-PDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGFFGNPSDFG-GSCQ 974
Query: 103 SCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI-WDLRRC 161
C+C+ + CD G+C + G H +L + G+ + D R+C
Sbjct: 975 PCQCHHNIDTTDPEACDKETGRCLKCLYHTEGD-HCQLC-----QYGYYGDALRQDCRKC 1028
Query: 162 KRDTYPLG----HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCEC 215
+ Y LG H + C+ + G+C C P V G CDRC N + GC C C
Sbjct: 1029 VCN-Y-LGTVKEHCNGSDCHCDKATGQCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCNC 1086
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
N A S P+C+ GQC+C G C
Sbjct: 1087 NAAHSFG--PSCNEFTGQCQCMPGFGGRTC 1114
Score = 264 (98.0 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 69/231 (29%), Positives = 96/231 (41%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP-IGSLNLQ-CNSE-GRC-QCKP 79
C+ C G C+ C ++ D C C C+ I + + + C+ E GRC +C
Sbjct: 944 CV-CDPGYIGSRCDDCASGFFGNPSDFGGSCQPCQCHHNIDTTDPEACDKETGRCLKCLY 1002
Query: 80 GVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
GD C C +Y D C+ C CN G+VK +C+ C+ A G+
Sbjct: 1003 HTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVKE--HCNGSDCHCDKAT----GQCSC 1056
Query: 139 ELRVQSRKNFDPAGNRIWDLRR---CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDK 194
V + N D W L C H S CN G+CQC PG G
Sbjct: 1057 LPNVIGQ-NCDRCAPNTWQLASGTGCGPCNCNAAH--SFGPSCNEFTGQCQCMPGFGGRT 1113
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C + + C++C+C+P G TP CD GQC C + VEG +C
Sbjct: 1114 CSECQELFWGDPDVECRACDCDPRGI--ETPQCDQSTGQCVCVEGVEGPRC 1162
Score = 246 (91.7 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 68/236 (28%), Positives = 102/236 (43%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
+GG C C+ + G C +C + G N C C+C+ GS + C++ G+C C G
Sbjct: 788 NGGQC-QCRPNVVGRTCNRCAPGTFG-FGPNGCKPCDCHLQGSASAFCDAITGQCHCFQG 845
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+ +CDRC ++ F C+ C+CN G + +CD+V G+C S Q + G H
Sbjct: 846 IYARQCDRCLPGYWGF--PSCQPCQCN--G---HALDCDTVTGECLSCQDYTTG--HNCE 896
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG-----RCQCKPGVTGDKC 195
R + DP R C P G C + C C PG G +C
Sbjct: 897 RCLAGYYGDPIIGSGDHCRPCPCPDGP-DSGRQFARSCYQDPVTLQLACVCDPGYIGSRC 955
Query: 196 DRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
D C + DFG C+ C+C+ + CD G+C +C + EG C+
Sbjct: 956 DDCASGFFGNPSDFG-GSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQ 1010
Score = 238 (88.8 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 65/203 (32%), Positives = 88/203 (43%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE--------GRC 75
G CL C +G +C+ C+ YY + C C CN +G++ CN G+C
Sbjct: 995 GRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVKEHCNGSDCHCDKATGQC 1054
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C P V G CDRC N + GC C CN A S P+C+ GQC+ G
Sbjct: 1055 SCLPNVIGQNCDRCAPNTWQLASGTGCGPCNCNAAHSFG--PSCNEFTGQCQCMP-GFGG 1111
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGD 193
R +E + + F G+ + R C D P G QC+ S G+C C GV G
Sbjct: 1112 RTCSECQ----ELF--WGDPDVECRACDCD--PRGIETP---QCDQSTGQCVCVEGVEGP 1160
Query: 194 KCDRCDVNHYDFGEAGCKSC-EC 215
+CD+C Y C C +C
Sbjct: 1161 RCDKC-TRGYSGVFPDCTPCHQC 1182
Score = 237 (88.5 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 66/225 (29%), Positives = 101/225 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
CNCN S+ C FD ++ TG+ GG C +CQ + G NCE+C+ Y+Q N
Sbjct: 335 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 394
Query: 54 CTACNCNPIGSLNLQ-CNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C C+P GS N C+ G+C+CK V G++CD C YD
Sbjct: 395 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYG 454
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW----DLR 159
C+ + P + C+S G + + R+ + + D + W DL
Sbjct: 455 CKSCACNPLGTIPGGNP----CDS----ETGYCYCK-RLVTGQRCDQCLPQHWGLSNDLD 505
Query: 160 RCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
C+ LG G+LN C+ + G+C C P + G +C+ + +Y
Sbjct: 506 GCRPCDCDLG--GALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 548
Score = 210 (79.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 68/231 (29%), Positives = 101/231 (43%)
Query: 33 RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDV 91
R+ C+KC N + S C+ + L S G C C+ G C++C
Sbjct: 327 RNSNACKKCNCNEHSSS-------CHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKP 379
Query: 92 NHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
++ E C+ C C+PAGS +N CD G + + G+ +L V+
Sbjct: 380 FYFQHPERDIRDPNLCEPCTCDPAGS-ENGGICD---GYTDFSVGLIAGQCRCKLHVEGE 435
Query: 146 KNFDPAGNRIWDLRR-----CKRDTY-PLGH--GGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ D +DL CK PLG GG+ C+SE G C CK VTG +CD
Sbjct: 436 R-CDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGN---PCDSETGYCYCKRLVTGQRCD 491
Query: 197 RCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+C H+ GC+ C+C+ G++ N+ C GQC C ++ G QC
Sbjct: 492 QCLPQHWGLSNDLDGCRPCDCDLGGALNNS--CSEDSGQCSCLPHMIGRQC 540
Score = 187 (70.9 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 38/97 (39%), Positives = 53/97 (54%)
Query: 36 PNCEKCRDNYYQKSGDNFCT--ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVN 92
P + CR+ + S T AC C+P GSL+ C+ G +CQC+P V G C+RC
Sbjct: 750 PMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Query: 93 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+ FG GCK C+C+ GS + CD++ GQC Q
Sbjct: 810 TFGFGPNGCKPCDCHLQGSA--SAFCDAITGQCHCFQ 844
Score = 176 (67.0 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ C+ G +CQC+P V G C+RC + FG GCK C+C+ GS + CD++
Sbjct: 779 GSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSA--SAFCDAI 836
Query: 231 KGQCECKDNVEGAQC 245
GQC C + QC
Sbjct: 837 TGQCHCFQGIYARQC 851
Score = 129 (50.5 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 63/223 (28%), Positives = 87/223 (39%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHG---GHCLDCQGDRDGPNCEKCRDNYY-------QKSG 50
C C G ++ C + N G GHC+ C+ + G NCE C D Y+ +
Sbjct: 271 CFCYGHASECA-PVDGVNEEVEGMVHGHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRN 328
Query: 51 DNFCTACNCNPIGSLNLQCNSEGRCQCKPG-VTGDKCDRCDVNHYDFGEAGCKSCEC--- 106
N C CNCN S C+ + G V+G CD C H G C+ C+
Sbjct: 329 SNACKKCNCNEHSS---SCHFDMAVFLATGNVSGGVCDNCQ--HNTMGR-NCEQCKPFYF 382
Query: 107 -NPAGSVKNTPN-CDSVKGQCESAQLSSRGRV---HTELRV-----QSRKNFDPAGNRIW 156
+P +++ PN C+ C+ A S G + +T+ V Q R G R
Sbjct: 383 QHPERDIRD-PNLCEPCT--CDPAG-SENGGICDGYTDFSVGLIAGQCRCKLHVEGERC- 437
Query: 157 DLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVT---GDKCD 196
D+ CK Y L C S C C P T G+ CD
Sbjct: 438 DV--CKEGFYDLSAEDPYG--CKS---CACNPLGTIPGGNPCD 473
Score = 94 (38.1 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+CEC+P GS+ + CD GQC+C+ NV G C
Sbjct: 772 ACECDPQGSLSSV--CDPNGGQCQCRPNVVGRTC 803
Score = 37 (18.1 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 208 AGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
A C EC G PNC + +G+ +C
Sbjct: 1404 ADCSESECG--G-----PNCRTDEGEKKC 1425
>UNIPROTKB|O15230 [details] [associations]
symbol:LAMA5 "Laminin subunit alpha-5" species:9606 "Homo
sapiens" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0090002 "establishment of protein
localization to plasma membrane" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IC] [GO:0016477 "cell
migration" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=NAS] [GO:0008283 "cell proliferation" evidence=NAS]
[GO:0005605 "basal lamina" evidence=NAS] [GO:0048041 "focal
adhesion assembly" evidence=NAS] [GO:0009790 "embryo development"
evidence=NAS] [GO:0045446 "endothelial cell differentiation"
evidence=NAS] [GO:0008037 "cell recognition" evidence=NAS]
[GO:0001525 "angiogenesis" evidence=NAS] [GO:0005178 "integrin
binding" evidence=IDA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=NAS] [GO:0043259 "laminin-10 complex" evidence=IDA;TAS]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0043260 "laminin-11 complex" evidence=TAS]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IDA] InterPro:IPR001368 InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0007010
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0005198
GO:GO:0030324 GO:GO:0008283 GO:GO:0001755 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009790 GO:GO:0030334 GO:GO:0001942
GO:GO:0007517 GO:GO:0048041 GO:GO:0005178 PROSITE:PS01186
GO:GO:0007229 GO:GO:0042475 EMBL:AL354836 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384
GO:GO:0001738 GO:GO:0034446 GO:GO:0090002
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0016331
GO:GO:0001658 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
Pathway_Interaction_DB:syndecan_1_pathway GO:GO:0060445
Pfam:PF02210 GO:GO:0008037 DrugBank:DB00015 GO:GO:0045995
GO:GO:0045446 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
EMBL:AF443072 EMBL:AB067494 EMBL:AB011105 EMBL:Z95636
IPI:IPI00783665 RefSeq:NP_005551.3 UniGene:Hs.473256
ProteinModelPortal:O15230 SMR:O15230 IntAct:O15230
MINT:MINT-1183475 STRING:O15230 PhosphoSite:O15230 PaxDb:O15230
PRIDE:O15230 DNASU:3911 Ensembl:ENST00000252999 GeneID:3911
KEGG:hsa:3911 UCSC:uc002ycq.3 CTD:3911 GeneCards:GC20M060883
H-InvDB:HIX0015978 HGNC:HGNC:6485 MIM:601033 neXtProt:NX_O15230
PharmGKB:PA30274 InParanoid:O15230 OMA:LRHTTGP OrthoDB:EOG4VHK5G
ChiTaRS:LAMA5 GenomeRNAi:3911 NextBio:15363 ArrayExpress:O15230
Bgee:O15230 CleanEx:HS_LAMA5 Genevestigator:O15230
GermOnline:ENSG00000130702 GO:GO:0043259 GO:GO:0043260
Uniprot:O15230
Length = 3695
Score = 303 (111.7 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 74/228 (32%), Positives = 102/228 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G CL CQ + GP+C++CR Y+ G C AC C+P G+L+ C + G C+C+PG TG
Sbjct: 603 GRCL-CQPEFAGPHCDRCRPGYH---GFPNCQACTCDPRGALDQLCGAGGLCRCRPGYTG 658
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
C C + F C C C+ GS+ CD GQC S R RV T LR
Sbjct: 659 TACQECSPGFHGF--PSCVPCHCSAEGSLHAA--CDPRSGQC-----SCRPRV-TGLRC- 707
Query: 144 SRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH 202
D ++ C+ + +P G ++ C C+ V G CDRC
Sbjct: 708 -----DTCVPGAYNFPYCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDRCKPGF 762
Query: 203 YDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ + GC C C+ G++ C GQC CK +V G C S
Sbjct: 763 WGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACAS 810
Score = 303 (111.7 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 83/262 (31%), Positives = 111/262 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN 58
C C+G S+RC G G C+DCQ + +G +CE+C+ + D C +C
Sbjct: 1864 CQCHGHSDRCL--------PG-SGVCVDCQHNTEGAHCERCQAGFVSSRDDPSAPCVSCP 1914
Query: 59 CN-PIGSLNLQ--CNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNP 108
C + S N C G +C CKPG G C+RC + G + C+ C+C+
Sbjct: 1915 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSS-CQPCDCSG 1973
Query: 109 AGSVKNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTY 166
G +CD + G C + G E+ F GN + C R D
Sbjct: 1974 NGDPNLLFSDCDPLTGACRGCLRHTTGP-RCEI---CAPGF--YGNALLP-GNCTRCDCT 2026
Query: 167 PLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDF-GEAGCKSCECNPAGSVKNT 224
P G C+ G C CK GVTG +CDRC H+ F G GC+ C C PA
Sbjct: 2027 PCGTEA-----CDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE- 2080
Query: 225 PNCDSVKGQCECKDNVEGAQCR 246
C GQC C+ G QCR
Sbjct: 2081 --CHPQSGQCHCRPGTMGPQCR 2100
Score = 261 (96.9 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 77/257 (29%), Positives = 110/257 (42%)
Query: 4 NGFSN--RCFFDKE--LYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
+GF N C D L G GG C C+ G C++C ++ G C C+C
Sbjct: 624 HGFPNCQACTCDPRGALDQLCGAGGLCR-CRPGYTGTACQECSPGFH---GFPSCVPCHC 679
Query: 60 NPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 118
+ GSL+ C+ G+C C+P VTG +CD C Y+F C++ C+PAG P
Sbjct: 680 SAEGSLHAACDPRSGQCSCRPRVTGLRCDTCVPGAYNFPY--CEAGSCHPAGLAPVDP-- 735
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL-----RRCKRDTYPL-GHGG 172
AQ+ R H E + D W L C R + L G G
Sbjct: 736 -----ALPEAQVPCMCRAHVE-----GPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLG 785
Query: 173 SLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCD 228
+ +C G+C CKP V G C C + +A GC+SC C+ G++ + C+
Sbjct: 786 GV-AECQPGTGQCFCKPHVCGQACASCKDGFFGLDQADYFGCRSCRCDIGGALGQS--CE 842
Query: 229 SVKGQCECKDNVEGAQC 245
G C C+ N +G C
Sbjct: 843 PRTGVCRCRPNTQGPTC 859
Score = 260 (96.6 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 79/275 (28%), Positives = 117/275 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH---------GGHCLDCQGDRDGPNCEKCRDNYYQK--- 48
CNC G + C++D E+ R GG C+DCQ G NCE+C +Y+
Sbjct: 359 CNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPNH 418
Query: 49 --SGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C CNC + C GRC C+P +G++CD C G G SC
Sbjct: 419 PLDSPHVCRRCNCES-DFTDGTCEDLTGRCYCRPNFSGERCDVCAE-----GFTGFPSCY 472
Query: 106 CNPAGSVKNTPNCDSVKGQ---CESAQLSSRGRV-HTELRVQS---RKNFDPAGNRIWDL 158
P+ S +T GQ C+ + ++G + RV + NF G +L
Sbjct: 473 PTPSSS-NDTREQVLPAGQIVNCDCSAAGTQGNACRKDPRVGRCLCKPNFQ--GTHC-EL 528
Query: 159 RRCKRDTYPLG-------HGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
C Y G G + +C+ + G+C+C+ G G CDRC ++ F C
Sbjct: 529 --CAPGFYGPGCQPCQCSSPGVADDRCDPDTGQCRCRVGFEGATCDRCAPGYFHFPL--C 584
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C C+PAG++ CD G+C C+ G C
Sbjct: 585 QLCGCSPAGTLPE--GCDEA-GRCLCQPEFAGPHC 616
Score = 233 (87.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 67/235 (28%), Positives = 94/235 (40%)
Query: 23 GGH--CLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNCNPIGSLNL---QCNS-EG 73
GG CL C+ G +CE+C ++ G + C C+C+ G NL C+ G
Sbjct: 1932 GGRTQCL-CKPGYAGASCERCAPGFFGNPLVLGSS-CQPCDCSGNGDPNLLFSDCDPLTG 1989
Query: 74 RCQ-CKPGVTGDKCDRCDVNHYDFG--EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C+ C TG +C+ C Y C C+C P G T CD G C +
Sbjct: 1990 ACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCG----TEACDPHSGHC-LCKA 2044
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
GR + + FD G R C P G + Q G+C C+PG
Sbjct: 2045 GVTGR-RCDRCQEGHFGFDGCGG----CRPCACG--PAAEGSECHPQ---SGQCHCRPGT 2094
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G +C C ++ E GC+ C+C P G CD G+C C + G +C
Sbjct: 2095 MGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGRCNCPPGLSGERC 2142
Score = 191 (72.3 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 34/105 (32%), Positives = 52/105 (49%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPG 80
H GHCL C+ G C++C++ ++ G C C C P +C+ + G+C C+PG
Sbjct: 2036 HSGHCL-CKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAE-GSECHPQSGQCHCRPG 2093
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +C C ++ E GC+ C+C P G CD G+C
Sbjct: 2094 TMGPQCRECAPGYWGLPEQGCRRCQC-PGG------RCDPHTGRC 2131
Score = 173 (66.0 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C C+ +G C++C Y+ C C C+P G+L C+ GRC C+P G
Sbjct: 558 GQCR-CRVGFEGATCDRCAPGYFHFP---LCQLCGCSPAGTLPEGCDEAGRCLCQPEFAG 613
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
CDRC ++ F C++C C+P G++
Sbjct: 614 PHCDRCRPGYHGF--PNCQACTCDPRGAL 640
Score = 170 (64.9 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 178 CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
C+++ G+C+C+P VTG +CD C + G C+ C+C+ AG+ CD + GQC C
Sbjct: 1543 CDTDSGQCKCRPNVTGRRCDTCSPGFH--GYPRCRPCDCHEAGTAPGV--CDPLTGQCYC 1598
Query: 237 KDNVEGAQC 245
K+NV+G +C
Sbjct: 1599 KENVQGPKC 1607
Score = 153 (58.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 47/187 (25%), Positives = 70/187 (37%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQC---NSEGRCQCKPG 80
G C C+ G C+ C Y +C A +C+P G + ++ C C+
Sbjct: 694 GQC-SCRPRVTGLRCDTCVPGAYNFP---YCEAGSCHPAGLAPVDPALPEAQVPCMCRAH 749
Query: 81 VTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
V G CDRC + + GC C C+ G++ C GQC + G+
Sbjct: 750 VEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQC-FCKPHVCGQAC 808
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD 196
+ D A + R C+ D GG+L C G C+C+P G C
Sbjct: 809 ASCK-DGFFGLDQAD--YFGCRSCRCDI-----GGALGQSCEPRTGVCRCRPNTQGPTCS 860
Query: 197 RCDVNHY 203
+HY
Sbjct: 861 EPARDHY 867
Score = 142 (55.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 53/201 (26%), Positives = 74/201 (36%)
Query: 35 GPNCE----KCRDNYYQKSGDNFCTAC--------NCNPIGSLNLQCNS-EGRCQCKPGV 81
GP CE +C + + D C+ C NC P C+ G+C C P
Sbjct: 1447 GPTCEPFGGQCPCHAHVIGRD--CSRCATGYWGFPNCRPCDCGARLCDELTGQCICPPRT 1504
Query: 82 TGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKNT-PNCDSVKGQCESAQLSSRGRVHTE 139
C C + GC+ C C+ G + T P CD+ GQC+
Sbjct: 1505 IPPDCLLCQPQTFGCHPLVGCEECNCSGPGIQELTDPTCDTDSGQCKCRP---------- 1554
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR 197
V R+ D RC+ D + G + C+ G+C CK V G KCD+
Sbjct: 1555 -NVTGRR-CDTCSPGFHGYPRCRPCDCHEAGTAPGV---CDPLTGQCYCKENVQGPKCDQ 1609
Query: 198 CDVNHYDFGEA---GCKSCEC 215
C + + A GC C C
Sbjct: 1610 CSLGTFSLDAANPKGCTRCFC 1630
Score = 132 (51.5 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 52/196 (26%), Positives = 71/196 (36%)
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
+P G L N E C C GD C C Y G C P ++ C
Sbjct: 1817 SPAGQGALASNVE-LCLCPASYRGDSCQECAPGFYR-DVKGLFLGRCVPCQCHGHSDRCL 1874
Query: 120 SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-HGGSLNLQC 178
G C Q ++ G H E R Q+ F +R C PL + C
Sbjct: 1875 PGSGVCVDCQHNTEG-AHCE-RCQA--GF--VSSRDDPSAPCVSCPCPLSVPSNNFAEGC 1928
Query: 179 NSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNT-PNCDSV 230
G +C CKPG G C+RC + G + C+ C+C+ G +CD +
Sbjct: 1929 VLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSS-CQPCDCSGNGDPNLLFSDCDPL 1987
Query: 231 KGQCE-CKDNVEGAQC 245
G C C + G +C
Sbjct: 1988 TGACRGCLRHTTGPRC 2003
Score = 122 (48.0 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 29/93 (31%), Positives = 40/93 (43%)
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSC 213
W C+ P G L C+ G+C C P C C + GC+ C
Sbjct: 1476 WGFPNCR----PCDCGARL---CDELTGQCICPPRTIPPDCLLCQPQTFGCHPLVGCEEC 1528
Query: 214 ECNPAGSVKNT-PNCDSVKGQCECKDNVEGAQC 245
C+ G + T P CD+ GQC+C+ NV G +C
Sbjct: 1529 NCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRC 1561
Score = 110 (43.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 30/106 (28%), Positives = 42/106 (39%)
Query: 25 HCLDCQGDRDGPNCEK--CRDNYYQKS--GDNFCTACNCNPIGSLNLQCNS-EGRCQCKP 79
HC QG P+ CR+ S +N C C+ +G+ C G+C C
Sbjct: 1403 HCA-AQGYHISPSSSSLFCRNAAASLSLFYNNGARPCGCHEVGATGPTCEPFGGQCPCHA 1461
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
V G C RC ++ F C+ C+C CD + GQC
Sbjct: 1462 HVIGRDCSRCATGYWGF--PNCRPCDCGAR-------LCDELTGQC 1498
Score = 89 (36.4 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 31/107 (28%), Positives = 41/107 (38%)
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTY-PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCD 199
++Q R F + ++ LRR + P G G L N E C C GD C C
Sbjct: 1792 QLQIRALFSQISSAVF-LRRVALEVASPAGQGA---LASNVE-LCLCPASYRGDSCQECA 1846
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
Y G C P ++ C G C +C+ N EGA C
Sbjct: 1847 PGFYR-DVKGLFLGRCVPCQCHGHSDRCLPGSGVCVDCQHNTEGAHC 1892
Score = 74 (31.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 20/79 (25%), Positives = 29/79 (36%)
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
PL C ++G P + C + F G + C C+ G+ P
Sbjct: 1393 PLDKSYDFISHCAAQGY-HISPSSSSLFCRNAAASLSLFYNNGARPCGCHEVGATG--PT 1449
Query: 227 CDSVKGQCECKDNVEGAQC 245
C+ GQC C +V G C
Sbjct: 1450 CEPFGGQCPCHAHVIGRDC 1468
Score = 57 (25.1 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNC 59
G C C+ + GP C++C + N CT C C
Sbjct: 1594 GQCY-CKENVQGPKCDQCSLGTFSLDAANPKGCTRCFC 1630
Score = 55 (24.4 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 16/66 (24%), Positives = 28/66 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C C+G ++ C + + T CQ + G C++C + Q+ + N
Sbjct: 300 CVCHGHADAC----DAKDPTDPFRLQCTCQHNTCGGTCDRCCPGFNQQPWKPATANSANE 355
Query: 54 CTACNC 59
C +CNC
Sbjct: 356 CQSCNC 361
Score = 54 (24.1 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 13/48 (27%), Positives = 18/48 (37%)
Query: 74 RCQCKPGVTGDKCDRC--DVNHYDFGEAGCKSC-ECNPAGSVKNTPNC 118
+C C+ G CDRC N + A S EC + +C
Sbjct: 321 QCTCQHNTCGGTCDRCCPGFNQQPWKPATANSANECQSCNCYGHATDC 368
Score = 42 (19.8 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
D K + E S G T L +Q + F PAG+++ + + LG +LNL
Sbjct: 2448 DQAKEELERLAASLDG-ARTPL-LQRMQTFSPAGSKLRLVEAAEAHAQQLGQL-ALNL 2502
>MGI|MGI:99915 [details] [associations]
symbol:Lamb3 "laminin, beta 3" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0005610 "laminin-5
complex" evidence=IDA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0050873
"brown fat cell differentiation" evidence=IDA] MGI:MGI:99915
GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:CH466555 GO:GO:0005610
GeneTree:ENSGT00620000087753 CTD:3914 eggNOG:NOG289025
HOGENOM:HOG000113279 HOVERGEN:HBG052302 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z ChiTaRS:LAMB3 EMBL:U43298 EMBL:AK155769
EMBL:BC008516 IPI:IPI00117093 RefSeq:NP_032510.2 UniGene:Mm.435441
ProteinModelPortal:Q61087 SMR:Q61087 STRING:Q61087
PhosphoSite:Q61087 PaxDb:Q61087 PRIDE:Q61087
Ensembl:ENSMUST00000016315 Ensembl:ENSMUST00000159955 GeneID:16780
KEGG:mmu:16780 InParanoid:Q91V90 NextBio:290632 Bgee:Q61087
CleanEx:MM_LAMB3 Genevestigator:Q61087
GermOnline:ENSMUSG00000026639 Uniprot:Q61087
Length = 1168
Score = 297 (109.6 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 76/263 (28%), Positives = 121/263 (46%)
Query: 1 CNCNGFSNRCFFDKELY--NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CNG S C FD ++ ++ +GG C +C+ +G NCE+C+ +Y++ +
Sbjct: 313 CDCNGHSETCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNRRPSAPIHET 372
Query: 54 CTACNCNPIGSLN-LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNP 108
C C C+P G++ C+ G+C CK V G++CD C A GC +C+C+
Sbjct: 373 CIPCECDPDGAVQGAPCDRLTGQCVCKEYVQGERCDLCKPGFTGLTFANPKGCHACDCSI 432
Query: 109 AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G+ K+ P C+ G+C L V + + ++ A C D P
Sbjct: 433 LGARKDMP-CEEETGRC----LCLPNVVGPKCDQCAPSHWKLASGL--GCEPCACD--PR 483
Query: 169 GHGGSLNLQCNS-EGRCQCKPGVTGDKCD-----RCDVNHYDFGEAGCKSCECNPAGSVK 222
SL+ QCN G+C C+ G G C +C Y GC++C+C+ G+
Sbjct: 484 N---SLSSQCNQFTGQCPCREGFGGLTCSSAAIRQCPDQTYGHVATGCRACDCDFRGT-- 538
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
P CD G+C C+ G +C
Sbjct: 539 EGPGCDKASGRCLCRPGFTGPRC 561
Score = 269 (99.8 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 76/273 (27%), Positives = 115/273 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF-- 53
C C+G ++RC + + CQ + GPNC++C Y + G +
Sbjct: 250 CFCHGHADRCAPNPGGSTTAVQVNNVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQDTHE 309
Query: 54 CTACNCN---------PIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG--- 100
C C+CN P Q + G C C+ G C+RC ++++
Sbjct: 310 CQRCDCNGHSETCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNRRPSAPI 369
Query: 101 ---CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
C CEC+P G+V+ P CD + GQC + R +L + F G +
Sbjct: 370 HETCIPCECDPDGAVQGAP-CDRLTGQCVCKEYVQGERC--DL---CKPGF--TGLTFAN 421
Query: 158 LRRCKR-DTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCE 214
+ C D LG ++ C E GRC C P V G KCD+C +H+ GC+ C
Sbjct: 422 PKGCHACDCSILG--ARKDMPCEEETGRCLCLPNVVGPKCDQCAPSHWKLASGLGCEPCA 479
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C+P S+ + C+ GQC C++ G C S
Sbjct: 480 CDPRNSLSS--QCNQFTGQCPCREGFGGLTCSS 510
Score = 241 (89.9 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 59/198 (29%), Positives = 91/198 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSL-NLQCNSE-GRCQCKP 79
G C+ C+ G C+ C+ + + N C AC+C+ +G+ ++ C E GRC C P
Sbjct: 394 GQCV-CKEYVQGERCDLCKPGFTGLTFANPKGCHACDCSILGARKDMPCEEETGRCLCLP 452
Query: 80 GVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
V G KCD+C +H+ GC+ C C+P S+ + C+ GQC + G +
Sbjct: 453 NVVGPKCDQCAPSHWKLASGLGCEPCACDPRNSLSS--QCNQFTGQCPCRE-GFGGLTCS 509
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDR 197
++ + G+ R C D G+ C+ + GRC C+PG TG +CD+
Sbjct: 510 SAAIRQCPD-QTYGHVATGCRACDCD-----FRGTEGPGCDKASGRCLCRPGFTGPRCDQ 563
Query: 198 CDVNHYDFGEA--GCKSC 213
C H D C SC
Sbjct: 564 CQRGHCDRYPVCVACHSC 581
>UNIPROTKB|A7MB18 [details] [associations]
symbol:NTN4 "NTN4 protein" species:9913 "Bos taurus"
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=IEA] [GO:0043237 "laminin-1 binding" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277
eggNOG:NOG329215 HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 HOGENOM:HOG000060085 OrthoDB:EOG4M0F17
EMBL:DAAA02013606 EMBL:DAAA02013607 EMBL:BC151286 IPI:IPI00697984
RefSeq:NP_001095673.1 UniGene:Bt.26919 Ensembl:ENSBTAT00000004136
GeneID:537455 KEGG:bta:537455 InParanoid:A7MB18 NextBio:20877139
Uniprot:A7MB18
Length = 627
Score = 271 (100.5 bits), Expect = 8.7e-25, Sum P(2) = 8.7e-25
Identities = 54/142 (38%), Positives = 80/142 (56%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G +C++C+ +Y S +
Sbjct: 332 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQ------CN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C +C+C+P+GS L C+ S G C CKPGV G C+RC V ++ FG+ GC+ C+C
Sbjct: 392 CKSCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD G C S+
Sbjct: 452 --AGS------CDPHTGDCLSS 465
Score = 154 (59.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 56/192 (29%), Positives = 80/192 (41%)
Query: 70 NSEG-RCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP-AGSVKNTPNCDSVKGQ-- 124
N+ G CQ C P + D E C++C+CN A + N G
Sbjct: 298 NTAGTHCQHCAPLYNDRPWEAADGKTGSPNE--CRTCKCNGHADACHFDINVWEASGNRS 355
Query: 125 ---CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR-------CKR-DTYPLGHG-- 171
C Q ++ G+ H + + + F WDLRR CK +P+G
Sbjct: 356 GGVCNDCQHNTEGQ-HCQ---RCKPGF------YWDLRRPFSAPDACKSCSCHPVGSAVL 405
Query: 172 --GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
S+ S G C CKPGV G C+RC V ++ FG+ GC+ C+C AGS CD
Sbjct: 406 PFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYWGFGDYGCRPCDC--AGS------CDP 457
Query: 230 VKGQCECKDNVE 241
G C +++
Sbjct: 458 HTGDCLSSTDID 469
Score = 116 (45.9 bits), Expect = 0.00047, P = 0.00047
Identities = 33/82 (40%), Positives = 38/82 (46%)
Query: 171 GGSLN-LQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV----KN 223
GG N Q N+EG+ CQ CKPG D R + D CKSC C+P GS +
Sbjct: 356 GGVCNDCQHNTEGQHCQRCKPGFYWDL--RRPFSAPD----ACKSCSCHPVGSAVLPFSS 409
Query: 224 TPNCDSVKGQCECKDNVEGAQC 245
CD G C CK V G C
Sbjct: 410 VTFCDPSNGDCPCKPGVAGPHC 431
Score = 43 (20.2 bits), Expect = 8.7e-25, Sum P(2) = 8.7e-25
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 182 GRCQCKPGVTGDKCDRCDVNH 202
G+C+CK V G+ C + +
Sbjct: 503 GKCECKEQVLGNSKAFCGMKY 523
>UNIPROTKB|F1PJ02 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 OMA:EPFYWRL GO:GO:0005606
EMBL:AAEX03005489 EMBL:AAEX03005490 EMBL:AAEX03005491
Ensembl:ENSCAFT00000029520 Uniprot:F1PJ02
Length = 3034
Score = 297 (109.6 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 73/233 (31%), Positives = 104/233 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C DC+ G C++C YY C CNC+ GS++ C +G+C C PGV G
Sbjct: 872 GLC-DCKPHVTGQQCDQCLPGYYGLDTGLGCLPCNCSASGSMSDDCTEDGQCHCLPGVAG 930
Query: 84 DKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
+KCDRC Y + + GC C+C ++T CD G C HT
Sbjct: 931 EKCDRCARGFYAYQDGGCTPCDC---AHTQHT--CDPESGACICPP-------HTR---- 974
Query: 144 SRKNFDPAGNRIW--DLRR-CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCD 199
D + W DL C+ GS + C++ G C CKP G C +C
Sbjct: 975 -GATCDQCEDGYWGHDLELGCQACN--CSAVGSASHGCDALTGHCPCKPAFGGLSCHQCS 1031
Query: 200 VNHYDFGEAGCKSCECNPAGSVKNTPN-------CDSVKGQCECKDNVEGAQC 245
+ + DF + C +C+C+ G++ +T + C G C CK+NV G QC
Sbjct: 1032 LGYRDFPD--CVACDCDLRGTLADTCDEEQGLCSCAEDTGTCSCKENVLGLQC 1082
Score = 266 (98.7 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 79/264 (29%), Positives = 122/264 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C C+G + C +++ G C C+ + G +CE+C +Y + C C
Sbjct: 695 CECHGHAAEC----DIH------GVCSVCKHNTTGDHCEQCAPGFYGLPSRGTPGDCQRC 744
Query: 58 NCNPIGSLN--------LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSC-ECN 107
C P+ + + L+ E C QC PG +G C+RC +Y +SC CN
Sbjct: 745 AC-PLSTTSNNFSPTCHLEAGDEVVCDQCAPGYSGSWCERCADGYYGNPTVPGESCVPCN 803
Query: 108 PAGSVK--NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
+G+V +CDSV G+C ++ G H E + F G+ + + C+
Sbjct: 804 CSGNVDPFEAGHCDSVTGECLKCIGNTDG-AHCE---RCADGF--YGDAV-TAKNCRACE 856
Query: 166 YPLGHG-GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY--DFGEAGCKSCECNPAGSV 221
HG GS++ C+ + G C CKP VTG +CD+C +Y D G GC C C+ +GS+
Sbjct: 857 C---HGKGSISDVCHLDTGLCDCKPHVTGQQCDQCLPGYYGLDTG-LGCLPCNCSASGSM 912
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+ +C GQC C V G +C
Sbjct: 913 SD--DCTE-DGQCHCLPGVAGEKC 933
Score = 218 (81.8 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 68/240 (28%), Positives = 95/240 (39%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRCQ-CKPG 80
HC +C G +CE C YY+ G F C C C+ + +C+ G C CK
Sbjct: 661 HC-ECPQGYAGISCESCLPGYYRVDGILFGGICQPCECHGHAA---ECDIHGVCSVCKHN 716
Query: 81 VTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNCDSVKGQ---CESAQLS 131
TGD C++C Y G C+ C C P + N +P C G C+
Sbjct: 717 TTGDHCEQCAPGFYGLPSRGTPGDCQRCAC-PLSTTSNNFSPTCHLEAGDEVVCDQCAPG 775
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRC-QCKPG 189
G N G C + P G C+S G C +C
Sbjct: 776 YSGSWCERCADGYYGNPTVPGESCVPCN-CSGNVDPFEAG-----HCDSVTGECLKCIGN 829
Query: 190 VTGDKCDRCDVNHYDFGEA----GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C+RC Y G+A C++CEC+ GS+ + + D+ G C+CK +V G QC
Sbjct: 830 TDGAHCERCADGFY--GDAVTAKNCRACECHGKGSISDVCHLDT--GLCDCKPHVTGQQC 885
Score = 212 (79.7 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 44/128 (34%), Positives = 60/128 (46%)
Query: 1 CNCNG---FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTAC 57
C C+G S+ C D G C DC+ G C++C YY C C
Sbjct: 855 CECHGKGSISDVCHLDT---------GLC-DCKPHVTGQQCDQCLPGYYGLDTGLGCLPC 904
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
NC+ GS++ C +G+C C PGV G+KCDRC Y + + GC C+C ++T
Sbjct: 905 NCSASGSMSDDCTEDGQCHCLPGVAGEKCDRCARGFYAYQDGGCTPCDC---AHTQHT-- 959
Query: 118 CDSVKGQC 125
CD G C
Sbjct: 960 CDPESGAC 967
Score = 192 (72.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 56/197 (28%), Positives = 75/197 (38%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G C C G C++C +Y D CT C+C C+ E G C C P
Sbjct: 920 GQC-HCLPGVAGEKCDRCARGFYAYQ-DGGCTPCDC---AHTQHTCDPESGACICPPHTR 974
Query: 83 GDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G CD+C+ ++ E GC++C C+ GS + CD++ G C H +
Sbjct: 975 GATCDQCEDGYWGHDLELGCQACNCSAVGSASH--GCDALTGHCPCKPAFGGLSCH-QCS 1031
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 201
+ R +F DLR DT G L G C CK V G +C C
Sbjct: 1032 LGYR-DFPDCVACDCDLRGTLADTCDEEQG--LCSCAEDTGTCSCKENVLGLQCSECRAG 1088
Query: 202 HYDF---GEAGCKSCEC 215
Y GC C C
Sbjct: 1089 TYALHADDPLGCIPCFC 1105
Score = 184 (69.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 62/219 (28%), Positives = 95/219 (43%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQ----KSGDNF-------CTACNCNPIGSLNLQCNSE-G 73
CL C G +C+ C Y++ + G C CNCN C+ E G
Sbjct: 1315 CL-CPPGTAGFSCQDCAPGYHRGKLPQGGSRGPRPLLAPCVPCNCNNHSDA---CDPETG 1370
Query: 74 RC-QCKPGVTGDKCDRCDVNHYD--FGEAG-CKSCECNPAGSVKNTPNCDSVKG----QC 125
+C C TG+ CD C +Y G A C C C + +P C ++G +C
Sbjct: 1371 KCLNCSHSTTGEHCDVCAPGYYGKVTGSASDCSPCACPRSHPASFSPTC-VLEGDADFRC 1429
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRC 184
++ L G+ + E R S + +P +RC D P GS++ C+ G+C
Sbjct: 1430 DACVLGYEGQ-YCE-RCSSGYHGNPRALG-GTCQRC--DCSP---SGSVHGDCDRGSGQC 1481
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
C+PG TG +C++C+ H E+ C SC+ G + N
Sbjct: 1482 VCRPGATGLRCEQCEPRHILL-ESDCVSCDDECVGVLLN 1519
Score = 181 (68.8 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 49/138 (35%), Positives = 66/138 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-SGD-NFCTACN 58
CNCN S+ C D E G CL+C G +C+ C YY K +G + C+ C
Sbjct: 1356 CNCNNHSDAC--DPET-------GKCLNCSHSTTGEHCDVCAPGYYGKVTGSASDCSPCA 1406
Query: 59 C---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEA--G-CKSCECN 107
C +P S + C EG RC C G G C+RC ++ A G C+ C+C+
Sbjct: 1407 CPRSHP-ASFSPTCVLEGDADFRCDACVLGYEGQYCERCSSGYHGNPRALGGTCQRCDCS 1465
Query: 108 PAGSVKNTPNCDSVKGQC 125
P+GSV +CD GQC
Sbjct: 1466 PSGSVHG--DCDRGSGQC 1481
Score = 175 (66.7 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 52/187 (27%), Positives = 75/187 (40%)
Query: 74 RCQCKPGVTGDKCDRCDVNHY-----DFGEAGCKS--CECNPAGSVKNTPNCDSVKGQCE 126
+C C PG G C C ++ G G + C P ++ CD G+C
Sbjct: 1314 KCLCPPGTAGFSCQDCAPGYHRGKLPQGGSRGPRPLLAPCVPCNCNNHSDACDPETGKCL 1373
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG---- 182
+ S+ G H + V + + D C P H S + C EG
Sbjct: 1374 NCSHSTTGE-HCD--VCAPGYYGKVTGSASDCSPC---ACPRSHPASFSPTCVLEGDADF 1427
Query: 183 RCQ-CKPGVTGDKCDRCDVNHYDFGEA--G-CKSCECNPAGSVKNTPNCDSVKGQCECKD 238
RC C G G C+RC ++ A G C+ C+C+P+GSV +CD GQC C+
Sbjct: 1428 RCDACVLGYEGQYCERCSSGYHGNPRALGGTCQRCDCSPSGSVHG--DCDRGSGQCVCRP 1485
Query: 239 NVEGAQC 245
G +C
Sbjct: 1486 GATGLRC 1492
Score = 168 (64.2 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 45/141 (31%), Positives = 66/141 (46%)
Query: 1 CNCNGFSNRCFFDKELYNR------TGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+ + N+ G GG C++C + G NCE C D YY+
Sbjct: 280 CNCHNKAQDCYYDESVANQRRSLNTAGQFRGGGVCINCLQNTVGINCETCIDGYYRPHKV 339
Query: 51 ----DNFCTACNCNPIGSLNLQCNSE--------GRC--QCKPGVTGDKCDRCDVNHYDF 96
DN C C+C+P GSL+ C + G+ QC P G ++CD + +
Sbjct: 340 SPYEDNPCRPCDCDPFGSLSSVCIKDELQSGLHKGKQPGQC-PCKEGYAGEKCDRCQFGY 398
Query: 97 -GEAGCKSCECNPAGSVKNTP 116
C CEC+ AGSV P
Sbjct: 399 KAYPACIRCECSRAGSVNEDP 419
Score = 161 (61.7 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 61/210 (29%), Positives = 88/210 (41%)
Query: 57 CNC--NPIG-SLNLQCNSEGRCQCKPGVT--GDKCDRCDVN------HYDFGEAGCKSCE 105
C C N G S + C + +PG G+ C++C+ + +YD A +
Sbjct: 243 CQCEHNTCGESCSRCCPGYHQQPWRPGTVSAGNTCEKCNCHNKAQDCYYDESVANQRR-S 301
Query: 106 CNPAGSVKNTP---NC--DSVKGQCESAQLSSRGRVHTELRVQSRK----NFDPAGNRIW 156
N AG + NC ++V CE+ + R H + + DP G+ +
Sbjct: 302 LNTAGQFRGGGVCINCLQNTVGINCETC-IDGYYRPHKVSPYEDNPCRPCDCDPFGS-LS 359
Query: 157 DLRRCKRDTYPLG-HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
+ C +D G H G G+C CK G G+KCDRC + + C CEC
Sbjct: 360 SV--CIKDELQSGLHKGK------QPGQCPCKEGYAGEKCDRCQFGYKAY--PACIRCEC 409
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ AGSV P C C CK+NVEG C
Sbjct: 410 SRAGSVNEDP-CSE---PCLCKENVEGDNC 435
Score = 147 (56.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 61/216 (28%), Positives = 87/216 (40%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNL--QCNSEGRC-QCKPGVTGDKCDRCDV 91
G CEKC N + K+ D + N SLN Q G C C G C+ C
Sbjct: 274 GNTCEKC--NCHNKAQDCYYDESVANQRRSLNTAGQFRGGGVCINCLQNTVGINCETCID 331
Query: 92 NHY------DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
+Y + + C+ C+C+P GS+ + C +K + +S +G+ + +
Sbjct: 332 GYYRPHKVSPYEDNPCRPCDCDPFGSLSSV--C--IKDELQSGL--HKGKQPGQC--PCK 383
Query: 146 KNFDPAGNRIWDLRRCK--RDTYPL------GHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
+ + AG + D RC+ YP GS+N SE C CK V GD CD
Sbjct: 384 EGY--AGEKC-D--RCQFGYKAYPACIRCECSRAGSVNEDPCSEP-CLCKENVEGDNCDL 437
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSV 230
C Y+ E GC C C V CDS+
Sbjct: 438 CKPGFYNLKERNPEGCSECFCFGVSDV-----CDSL 468
Score = 72 (30.4 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C C G ++ C +D+ T C C+ + G +C +C Y+Q+ S N
Sbjct: 223 CICYGHASSCPWDE-----TTKKLQC-QCEHNTCGESCSRCCPGYHQQPWRPGTVSAGNT 276
Query: 54 CTACNCN 60
C CNC+
Sbjct: 277 CEKCNCH 283
Score = 62 (26.9 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNC 59
CL C+ + +G NC+ C+ +Y N C+ C C
Sbjct: 424 CL-CKENVEGDNCDLCKPGFYNLKERNPEGCSECFC 458
Score = 38 (18.4 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 6/14 (42%), Positives = 6/14 (42%)
Query: 234 CECKDNVEGAQCRS 247
CEC G C S
Sbjct: 662 CECPQGYAGISCES 675
>UNIPROTKB|Q9HB63 [details] [associations]
symbol:NTN4 "Netrin-4" species:9606 "Homo sapiens"
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005886
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0016322 EMBL:CH471054
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AF278532 EMBL:AF297711 EMBL:AF119916 EMBL:AY330211
EMBL:AL137540 EMBL:BC013591 EMBL:BC136798 EMBL:BC136799
EMBL:AL833767 EMBL:AK024691 IPI:IPI00328091 IPI:IPI00385236
IPI:IPI00472613 PIR:T46383 RefSeq:NP_067052.2 UniGene:Hs.201034
ProteinModelPortal:Q9HB63 SMR:Q9HB63 DIP:DIP-46274N IntAct:Q9HB63
MINT:MINT-1463888 STRING:Q9HB63 PhosphoSite:Q9HB63 DMDM:76789662
PaxDb:Q9HB63 PRIDE:Q9HB63 Ensembl:ENST00000343702
Ensembl:ENST00000344911 Ensembl:ENST00000538383
Ensembl:ENST00000553059 GeneID:59277 KEGG:hsa:59277 UCSC:uc001tei.3
UCSC:uc009ztf.3 CTD:59277 GeneCards:GC12M095984 HGNC:HGNC:13658
HPA:HPA049832 MIM:610401 neXtProt:NX_Q9HB63 PharmGKB:PA31815
eggNOG:NOG329215 HOVERGEN:HBG082019 InParanoid:Q9HB63 KO:K06845
OMA:RSQDFGK PhylomeDB:Q9HB63 ChiTaRS:NTN4 GenomeRNAi:59277
NextBio:65162 ArrayExpress:Q9HB63 Bgee:Q9HB63 CleanEx:HS_NTN4
Genevestigator:Q9HB63 GermOnline:ENSG00000074527 GO:GO:0060668
Uniprot:Q9HB63
Length = 628
Score = 284 (105.0 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 55/142 (38%), Positives = 80/142 (56%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD ++ +G+ GG C DCQ + +G C++C+ +Y+ S +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 391
Query: 54 CTACNCNPIGSLNLQCNS-------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L NS G C CKPGV G +CDRC V ++ FG+ GC+ C+C
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC 451
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
AGS CD + G C S+
Sbjct: 452 --AGS------CDPITGDCISS 465
Score = 154 (59.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 68/228 (29%), Positives = 90/228 (39%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ-CKP 79
GH C+ G R P K ++ G C C N GS CQ C P
Sbjct: 266 GHADQCIPVHGFR--P--VKAPGTFHMVHGK--CM-CKHNTAGS---------HCQHCAP 309
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCECNP-AGSVKNTPNCDSVKGQCESAQLSSRGRVHT 138
+ D E C++C+CN A + N G S + + +T
Sbjct: 310 LYNDRPWEAADGKTGAPNE--CRTCKCNGHADTCHFDVNVWEASGN-RSGGVCDDCQHNT 366
Query: 139 ELRVQSRKNFDPAGNRIWDLRR-------CKR-DTYPLGHG----GSLNLQCNSEGRCQC 186
E + R P R DLRR CK +P+G S+ S G C C
Sbjct: 367 EGQYCQRCK--PGFYR--DLRRPFSAPDACKPCSCHPVGSAVLPANSVTFCDPSNGDCPC 422
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
KPGV G +CDRC V ++ FG+ GC+ C+C AGS CD + G C
Sbjct: 423 KPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462
>UNIPROTKB|F1MEG3 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007166 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GO:GO:0002011 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0061304 OMA:EPFYWRL
GO:GO:0005606 GO:GO:0005608 EMBL:DAAA02056788 EMBL:DAAA02056789
EMBL:DAAA02056790 EMBL:DAAA02056791 EMBL:DAAA02056792
IPI:IPI01000434 Ensembl:ENSBTAT00000024169 Uniprot:F1MEG3
Length = 3031
Score = 277 (102.6 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 82/256 (32%), Positives = 108/256 (42%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNCN 60
N FS C D G C C G CE+C D YY GD+ C ACNC+
Sbjct: 755 NNFSPTCHLDD------GDEVVCDQCAPGYMGDWCERCADGYYGNPTVPGDS-CVACNCS 807
Query: 61 PIGSLNL----QCNS-EGRC-QCKPGVTGDKCDRCDVNHYDFGEA----GCKSCECNPAG 110
G+++L C+S G C +C G C+RC Y G+A C++CEC+ G
Sbjct: 808 --GNVDLLEPGSCDSVTGECLRCLGNTDGPHCERCADGFY--GDAVTAKNCRACECHGQG 863
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG- 169
S+ C G CE + H + + D + L P
Sbjct: 864 SLSAV--CHPETGLCEC-------KPHV-----TGQRCDQCLYGYYGLET-GLGCLPCNC 908
Query: 170 HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
GSL+ C EG C C PGV G+KCDRC Y + + GC C+C +NT CD
Sbjct: 909 SAGSLSDDCTPEGHCLCVPGVAGEKCDRCARGFYSYQDGGCTPCDC---AHTQNT--CDP 963
Query: 230 VKGQCECKDNVEGAQC 245
G+C C + GA C
Sbjct: 964 ETGECVCPPHTRGAAC 979
Score = 268 (99.4 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 83/263 (31%), Positives = 121/263 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C C+G + C +++ G C CQ + G +CE+C +Y + C C
Sbjct: 697 CECHGHAAEC----DVH------GVCFACQHNTTGEHCERCLPGFYGLPSRGTPGDCQPC 746
Query: 58 NCNPIG--SLNLQ--CN-SEGR---C-QCKPGVTGDKCDRCDVNHYDFGEAGCKSC-ECN 107
C P+ S N C+ +G C QC PG GD C+RC +Y SC CN
Sbjct: 747 AC-PLSTASNNFSPTCHLDDGDEVVCDQCAPGYMGDWCERCADGYYGNPTVPGDSCVACN 805
Query: 108 PAGSVK--NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
+G+V +CDSV G+C L + H E + F G+ + + C+
Sbjct: 806 CSGNVDLLEPGSCDSVTGECLRC-LGNTDGPHCE---RCADGF--YGDAV-TAKNCRACE 858
Query: 166 YPLGHG-GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVK 222
HG GSL+ C+ E G C+CKP VTG +CD+C +Y GC C C+ AGS+
Sbjct: 859 C---HGQGSLSAVCHPETGLCECKPHVTGQRCDQCLYGYYGLETGLGCLPCNCS-AGSLS 914
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ +C + +G C C V G +C
Sbjct: 915 D--DC-TPEGHCLCVPGVAGEKC 934
Score = 214 (80.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 60/198 (30%), Positives = 76/198 (38%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
GHCL C G C++C +Y D CT C+C C+ E G C C P
Sbjct: 921 GHCL-CVPGVAGEKCDRCARGFYSYQ-DGGCTPCDC---AHTQNTCDPETGECVCPPHTR 975
Query: 83 GDKCDRCDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G C+ C H+ E GC++C C+ G+ CD V G C + + GR E
Sbjct: 976 GAACEECADGHWGHDLELGCQACNCSSVGAASQ--RCDVVTGHCR-CKPAFGGRT-CEQC 1031
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 200
K F D R DT G C E G C CK V G +C C
Sbjct: 1032 SPGYKGFPDCMACDCDPRGTLADTCDQEQG---LCSCAQETGACSCKENVAGPQCGECRA 1088
Query: 201 NHYDFGEA---GCKSCEC 215
+ +A GC C C
Sbjct: 1089 GTFALDKADPRGCTPCFC 1106
Score = 204 (76.9 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 42/130 (32%), Positives = 66/130 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+C N C D E G C+ C G CE+C D ++ + C ACNC+
Sbjct: 952 CDCAHTQNTC--DPET-------GECV-CPPHTRGAACEECADGHWGHDLELGCQACNCS 1001
Query: 61 PIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 119
+G+ + +C+ G C+CKP G C++C + F + C +C+C+P G++ +T CD
Sbjct: 1002 SVGAASQRCDVVTGHCRCKPAFGGRTCEQCSPGYKGFPD--CMACDCDPRGTLADT--CD 1057
Query: 120 SVKGQCESAQ 129
+G C AQ
Sbjct: 1058 QEQGLCSCAQ 1067
Score = 182 (69.1 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
Identities = 57/181 (31%), Positives = 82/181 (45%)
Query: 1 CNCNGFSNRCFFDKELYNR------TGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+ + C++D+++ N+ G GG C+ C + G NCE C D YY+ G
Sbjct: 328 CNCHNKAKDCYYDEDVANQRRSLNIAGQFRGGGVCIGCLQNTMGVNCETCVDGYYRPHGV 387
Query: 51 ----DNFCTACNCNPIGSLNLQC-----NSE---GRC--QCKPGVTGDKCDRCDVNHYDF 96
D+ C C+C+P+GSLN C +S+ G C V G CDRC Y+
Sbjct: 388 SPYEDHPCRPCDCDPVGSLNSVCIKDDLHSDLHRGTCFISVLENVEGSHCDRCKPGFYNL 447
Query: 97 GEAGCKSC-ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL--RVQSRKNFDPAGN 153
E + C EC G V + C+S+ + S G + T+L Q R D G
Sbjct: 448 EEKNPQGCSECFCFG-VSDV--CESLSWPVSQVKDMS-GWLVTDLVSSNQIRSQEDALGG 503
Query: 154 R 154
R
Sbjct: 504 R 504
Score = 180 (68.4 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 63/220 (28%), Positives = 94/220 (42%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQ---KSGDNF--------CTACNCNPIGSLNLQCNSE-G 73
C+ C G +C+ C Y++ GD C CNCN C+ E G
Sbjct: 1316 CV-CPPGTAGLSCQDCAPGYHRGKLPEGDGRRPRPLLAPCVPCNCNNHSDT---CDPETG 1371
Query: 74 RC-QCKPGVTGDKCDRCDVNHYD--FGEAG-CKSCECNPAGSVKNTPNCDSVKG----QC 125
+C C TGD CD C +Y G A C C C + +P C ++G +C
Sbjct: 1372 KCLNCGHNTTGDHCDTCAPGYYGKVTGSASDCSPCTCPHSLPASYSPTC-ILEGDHDFRC 1430
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGR 183
++ + G+ + E R + GN C+R D P HG S++ C+ G+
Sbjct: 1431 DACFVGYEGQ-YCE-----RCSSGYYGNPRMPGSTCQRCDCSP--HG-SVHSDCDRGSGQ 1481
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
C C+PG TG +C C+ H E+ C SC+ + G + N
Sbjct: 1482 CICRPGATGLRCGDCEPRHI-LVESDCVSCDDDCVGVLLN 1520
Score = 180 (68.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 47/137 (34%), Positives = 66/137 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-SGD-NFCTACN 58
CNCN S+ C D E G CL+C + G +C+ C YY K +G + C+ C
Sbjct: 1357 CNCNNHSDTC--DPET-------GKCLNCGHNTTGDHCDTCAPGYYGKVTGSASDCSPCT 1407
Query: 59 C-NPI-GSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNP 108
C + + S + C EG RC C G G C+RC +Y + C+ C+C+P
Sbjct: 1408 CPHSLPASYSPTCILEGDHDFRCDACFVGYEGQYCERCSSGYYGNPRMPGSTCQRCDCSP 1467
Query: 109 AGSVKNTPNCDSVKGQC 125
GSV + +CD GQC
Sbjct: 1468 HGSVHS--DCDRGSGQC 1482
Score = 156 (60.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 50/194 (25%), Positives = 75/194 (38%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 116
C C P G+ L C C PG K D A C C CN ++
Sbjct: 1316 CVCPP-GTAGLSCQD-----CAPGYHRGKLPEGDGRRPRPLLAPCVPCNCN-----NHSD 1364
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK-RDTYPLGHGGSLN 175
CD G+C + ++ G H + + D C + P + +
Sbjct: 1365 TCDPETGKCLNCGHNTTGD-HCDTCAPGY--YGKVTGSASDCSPCTCPHSLPASYSPTCI 1421
Query: 176 LQCNSEGRCQ-CKPGVTGDKCDRCDVNHYD---FGEAGCKSCECNPAGSVKNTPNCDSVK 231
L+ + + RC C G G C+RC +Y + C+ C+C+P GSV + +CD
Sbjct: 1422 LEGDHDFRCDACFVGYEGQYCERCSSGYYGNPRMPGSTCQRCDCSPHGSVHS--DCDRGS 1479
Query: 232 GQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 1480 GQCICRPGATGLRC 1493
Score = 142 (55.0 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN---- 226
G+ + +C+ G C+CKP G C++C + F + C +C+C+P G++ +T +
Sbjct: 1004 GAASQRCDVVTGHCRCKPAFGGRTCEQCSPGYKGFPD--CMACDCDPRGTLADTCDQEQG 1061
Query: 227 ---CDSVKGQCECKDNVEGAQC 245
C G C CK+NV G QC
Sbjct: 1062 LCSCAQETGACSCKENVAGPQC 1083
Score = 137 (53.3 bits), Expect = 2.8e-23, Sum P(2) = 2.8e-23
Identities = 31/95 (32%), Positives = 38/95 (40%)
Query: 160 RCKRDTYPLGHGGSLNLQC----NS----EGRCQCKPGVTGDKCDRCDVNHYDFG-EAGC 210
RC R Y GG C N+ G C C P G C+ C H+ E GC
Sbjct: 936 RCARGFYSYQDGGCTPCDCAHTQNTCDPETGECVCPPHTRGAACEECADGHWGHDLELGC 995
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++C C+ G+ CD V G C CK G C
Sbjct: 996 QACNCSSVGAASQ--RCDVVTGHCRCKPAFGGRTC 1028
Score = 130 (50.8 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 32/104 (30%), Positives = 45/104 (43%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC-QCKPG 80
HC +C G +CE C YY+ G F C C C+ + +C+ G C C+
Sbjct: 663 HC-ECPQGYAGISCESCLPGYYRVDGILFGGICQPCECHGHAA---ECDVHGVCFACQHN 718
Query: 81 VTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKN--TPNC 118
TG+ C+RC Y G C+ C C P + N +P C
Sbjct: 719 TTGEHCERCLPGFYGLPSRGTPGDCQPCAC-PLSTASNNFSPTC 761
Score = 87 (35.7 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 31/108 (28%), Positives = 46/108 (42%)
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
R N++ A ++ L D + ++L +E C+C G G C+ C +Y
Sbjct: 627 RANYNSAQTALYRLDSVSLD---VASPNVIDLSLATEVEHCECPQGYAGISCESCLPGYY 683
Query: 204 --D---FGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
D FG C+ CEC+ G + CD V G C C+ N G C
Sbjct: 684 RVDGILFGGI-CQPCECH--G---HAAECD-VHGVCFACQHNTTGEHC 724
Score = 72 (30.4 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 21/76 (27%), Positives = 28/76 (36%)
Query: 183 RCQCKPGVTGDKCDRCDVNHY----DFGE--------AGCKSCECNPAGSVKNTPNCDSV 230
+C C PG G C C ++ G+ A C C CN ++ CD
Sbjct: 1315 KCVCPPGTAGLSCQDCAPGYHRGKLPEGDGRRPRPLLAPCVPCNCN-----NHSDTCDPE 1369
Query: 231 KGQC-ECKDNVEGAQC 245
G+C C N G C
Sbjct: 1370 TGKCLNCGHNTTGDHC 1385
Score = 39 (18.8 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 9/40 (22%), Positives = 12/40 (30%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEK 40
C G C + + R C C G P E+
Sbjct: 41 CGEKGPETYCKLVEHVPGRAMRNAQCRVCDGSSANPKAER 80
Score = 38 (18.4 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 6/14 (42%), Positives = 6/14 (42%)
Query: 234 CECKDNVEGAQCRS 247
CEC G C S
Sbjct: 664 CECPQGYAGISCES 677
>MGI|MGI:99916 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005178 "integrin binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005608 "laminin-3 complex" evidence=ISO;IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IGI] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0014044 "Schwann cell development" evidence=IDA] [GO:0031175
"neuron projection development" evidence=IDA] [GO:0043256 "laminin
complex" evidence=IDA] [GO:0045202 "synapse" evidence=IDA]
[GO:0048677 "axon extension involved in regeneration" evidence=IMP]
[GO:0050808 "synapse organization" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0072249
"metanephric glomerular visceral epithelial cell development"
evidence=IMP] [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IMP] MGI:MGI:99916 GO:GO:0007411
GO:GO:0007528 GO:GO:0007601 GO:GO:0007155 GO:GO:0045202
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
EMBL:CH466560 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
eggNOG:NOG241384 HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301 CTD:3913
KO:K06243 OMA:QPYCIVS OrthoDB:EOG4KSPHW ChiTaRS:LAMB2 GO:GO:0048677
GO:GO:0072274 GO:GO:0072249 EMBL:U43541 EMBL:U42624 EMBL:BC026051
EMBL:X75928 IPI:IPI00119065 PIR:I48749 RefSeq:NP_032509.2
UniGene:Mm.425599 ProteinModelPortal:Q61292 SMR:Q61292
STRING:Q61292 PhosphoSite:Q61292 PaxDb:Q61292 PRIDE:Q61292
Ensembl:ENSMUST00000065014 GeneID:16779 KEGG:mmu:16779
InParanoid:Q8R0Y0 NextBio:290628 Bgee:Q61292 CleanEx:MM_LAMB2
Genevestigator:Q61292 GermOnline:ENSMUSG00000052911 Uniprot:Q61292
Length = 1799
Score = 287 (106.1 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 76/236 (32%), Positives = 106/236 (44%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ G C+ C YY G C AC C+P G+L+ C + G+C C+PG
Sbjct: 799 HGGQCR-CKPGVVGRRCDVCATGYYG-FGPAGCQACQCSPDGALSALCEGTSGQCPCRPG 856
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CD C + F C+ C CN G CD+ G C + + G H E
Sbjct: 857 AFGLRCDHCQRGQWGF--PNCRPCVCN--G---RADECDTHTGACLGCRDYTGGE-HCE- 907
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL--QCNSEGR-----CQCKPGVTGD 193
R + + DP R+ +C+ P G G + C+ +G CQC+ G TG
Sbjct: 908 RCIAGFHGDP---RLPYGGQCRPCPCPEGPGSQRHFATSCHRDGYSQQIVCQCREGYTGL 964
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+C+ C H+ D + G C+ CEC+ + CD GQC C N EG C
Sbjct: 965 RCEACAPGHFGDPSKPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHNTEGPHC 1020
Score = 251 (93.4 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 68/209 (32%), Positives = 96/209 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C C+G N D + + H G CL C + +GP+C C+ ++ ++ C C CN
Sbjct: 987 CECSG--NIDPMDPDACDP--HTGQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCN 1042
Query: 61 PIG-------SLNL-QCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAG 110
+G S +L C+ S G+C C P V G CD C N ++F GC+ C C+P+
Sbjct: 1043 LLGTDPRRCPSTDLCHCDPSTGQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQPCACHPSR 1102
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
+ P C+ GQC GR +E Q DP R C D P G
Sbjct: 1103 A--RGPTCNEFTGQCH-CHAGFGGRTCSEC--QELYWGDPG----LQCRACDCD--PRGI 1151
Query: 171 GGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
QC+ S G C C+PGV+G +CD+C
Sbjct: 1152 DKP---QCHRSTGHCSCRPGVSGVRCDQC 1177
Score = 245 (91.3 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 77/266 (28%), Positives = 109/266 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C D H G CL C+ G +CE+C ++ + C C
Sbjct: 878 CVCNGRADEC--DT-------HTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPC 928
Query: 58 NC--NPIGSLN---LQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P GS C+ +G CQC+ G TG +C+ C H+ D + G C+ C
Sbjct: 929 PCPEGP-GSQRHFATSCHRDGYSQQIVCQCREGYTGLRCEACAPGHFGDPSKPGGRCQLC 987
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
EC+ + CD GQC ++ G H + F R RC +
Sbjct: 988 ECSGNIDPMDPDACDPHTGQCLRCLHNTEGP-HCGY---CKPGFHGQAAR-QSCHRCTCN 1042
Query: 165 ---TYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAG 219
T P + C+ S G+C C P V G CD C N ++F GC+ C C+P+
Sbjct: 1043 LLGTDPRRCPSTDLCHCDPSTGQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQPCACHPSR 1102
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ P C+ GQC C G C
Sbjct: 1103 A--RGPTCNEFTGQCHCHAGFGGRTC 1126
Score = 218 (81.8 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 61/206 (29%), Positives = 95/206 (46%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +C+ G +C+CKPGV G +CD C +Y FG AGC++C+C+P G
Sbjct: 779 NGALPCQCDPQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYGFGPAGCQACQCSPDG 838
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRV-HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
++ C+ GQC + R H + N P + + R + DT+
Sbjct: 839 ALSAL--CEGTSGQCPCRPGAFGLRCDHCQRGQWGFPNCRPC---VCNGRADECDTHT-- 891
Query: 170 HGGSLNLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA-GSVKN-TP 225
G L + + G C+ C G GD +G C+ C C GS ++
Sbjct: 892 -GACLGCRDYTGGEHCERCIAGFHGDP-------RLPYG-GQCRPCPCPEGPGSQRHFAT 942
Query: 226 NC--DSVKGQ--CECKDNVEGAQCRS 247
+C D Q C+C++ G +C +
Sbjct: 943 SCHRDGYSQQIVCQCREGYTGLRCEA 968
Score = 205 (77.2 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 59/225 (26%), Positives = 102/225 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG ++ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 350 CECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAV 409
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C+C+P+GS + +C+S G+C+CK V G +C +C + + +
Sbjct: 410 CRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASDPRG 469
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW----DLR 159
C+ S P C+S S G + R+ + D W DL
Sbjct: 470 CQRCQCNSRGTVPG----SSPCDS----SSGTCFCK-RLVTGHGCDRCLPGHWGLSHDLL 520
Query: 160 RCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C+ +G G+L+ QC+ + G+C+C+ + G +C++ ++
Sbjct: 521 GCRPCDCDVG--GALDPQCDEATGQCRCRQHMIGRRCEQVQPGYF 563
Score = 199 (75.1 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 71/228 (31%), Positives = 100/228 (43%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY-- 94
C KC N + S +F A + S N+ S G C C+ G C+ C Y
Sbjct: 347 CRKCECNGHTHSC-HFDMAVY---LASGNV---SGGVCDGCQHNTAGRHCEFCRPFFYRD 399
Query: 95 ---DFGE-AGCKSCECNPAGSVKNTPNCDS--------VKGQCESAQLSSRGRVHTELRV 142
D + A C+ C+C+P GS ++ CDS V GQC + V T +
Sbjct: 400 PTKDMRDPAVCRPCDCDPMGS-QDGGRCDSHDDPVLGLVSGQCRCKEHV----VGTRCQ- 453
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL--NLQCNSE-GRCQCKPGVTGDKCDRCD 199
Q R F G D R C+R G++ + C+S G C CK VTG CDRC
Sbjct: 454 QCRDGF--FGLSASDPRGCQR--CQCNSRGTVPGSSPCDSSSGTCFCKRLVTGHGCDRCL 509
Query: 200 VNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
H+ GC+ C+C+ G++ P CD GQC C+ ++ G +C
Sbjct: 510 PGHWGLSHDLLGCRPCDCDVGGALD--PQCDEATGQCRCRQHMIGRRC 555
Score = 194 (73.4 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 68/261 (26%), Positives = 99/261 (37%)
Query: 1 CNC-NGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNYY---QKSGDNFCT 55
C C G ++ F + R G+ + C+ G CE C ++ K G C
Sbjct: 928 CPCPEGPGSQRHFATSCH-RDGYSQQIVCQCREGYTGLRCEACAPGHFGDPSKPGGR-CQ 985
Query: 56 ACNCNP-IGSLNLQ-CNSE-GRC-QCKPGVTGDKCDRCDVN-HYDFGEAGCKSCECNPAG 110
C C+ I ++ C+ G+C +C G C C H C C CN G
Sbjct: 986 LCECSGNIDPMDPDACDPHTGQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLLG 1045
Query: 111 S-VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
+ + P+ D C+ S G+ VQ N D W+ R P
Sbjct: 1046 TDPRRCPSTDLC--HCDP----STGQCPCLPHVQGL-NCDHCAPNFWNFTS-GRGCQPCA 1097
Query: 170 -HGG-SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKNT 224
H + CN G+C C G G C C ++ G+ G C++C+C+P G K
Sbjct: 1098 CHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELYW--GDPGLQCRACDCDPRGIDK-- 1153
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
P C G C C+ V G +C
Sbjct: 1154 PQCHRSTGHCSCRPGVSGVRC 1174
>UNIPROTKB|F1P4C0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 OMA:RSQDFGK GO:GO:0060668
EMBL:AADN02005946 EMBL:AADN02005947 EMBL:AADN02005948
EMBL:AADN02005949 EMBL:AADN02005950 IPI:IPI00573187
Ensembl:ENSGALT00000018613 ArrayExpress:F1P4C0 Uniprot:F1P4C0
Length = 603
Score = 256 (95.2 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 51/142 (35%), Positives = 79/142 (55%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD + + +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 306 CKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDA 365
Query: 54 CTACNCNPIGSLNLQ------CN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L C+ S G C CKPGV G +CDRC ++ FG +GC+ C+C
Sbjct: 366 CKPCSCHPLGSAALPLGPRTFCDPSTGDCPCKPGVAGPRCDRCLPGYWGFGTSGCRPCDC 425
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
A S C + G C S+
Sbjct: 426 --ARS------CHPLTGDCHSS 439
Score = 142 (55.0 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 68/238 (28%), Positives = 101/238 (42%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC---TA---C-NCNPIGSLNLQCNSEG 73
GH HC+ +G R P + ++ G C TA C +C P+ + ++G
Sbjct: 240 GHADHCVPVRGFR--P--VRAAGAFHVVHGKCMCKHNTAGPHCQHCAPLYNDRPWQAADG 295
Query: 74 RCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD-SVKGQCESAQLS 131
+ KC+ D H+D +A S N +G V + NC + +GQ Q
Sbjct: 296 KTGAPRECQSCKCNGHADTCHFDM-DAWLASG--NRSGGVCD--NCQHNTEGQ--HCQRC 348
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQ----CN-SEGRCQ 185
G + +LR K F CK +PLG +L L C+ S G C
Sbjct: 349 KPG-FYRDLR----KPFSAPD-------ACKPCSCHPLG-SAALPLGPRTFCDPSTGDCP 395
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
CKPGV G +CDRC ++ FG +GC+ C+C A S C + G C +V+ +
Sbjct: 396 CKPGVAGPRCDRCLPGYWGFGTSGCRPCDC--ARS------CHPLTGDCHSSSSVDAS 445
Score = 45 (20.9 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 214 ECNPAGSVKNTPNCDSVK--GQCECKDNVEG 242
E PA ++ +++ G+CECK+ V G
Sbjct: 459 ESKPAWGWEDEQGFSALRHSGKCECKEQVLG 489
Score = 42 (19.8 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 182 GRCQCKPGVTGDKCDRCDVNH 202
G+C+CK V G+ C + +
Sbjct: 479 GKCECKEQVLGNSKVFCGMKY 499
>ZFIN|ZDB-GENE-021226-1 [details] [associations]
symbol:lamb1a "laminin, beta 1a" species:7955 "Danio
rerio" [GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
ZFIN:ZDB-GENE-021226-1 GO:GO:0048471 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007517 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 HSSP:P02468
GO:GO:0050908 GO:GO:0031290 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0007634 HOGENOM:HOG000007552
KO:K05636 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
EMBL:AF468049 IPI:IPI00485526 RefSeq:NP_775382.1 UniGene:Dr.76526
ProteinModelPortal:Q8JHV7 STRING:Q8JHV7 PRIDE:Q8JHV7 GeneID:286830
KEGG:dre:286830 CTD:286830 NextBio:20806481 Bgee:Q8JHV7
Uniprot:Q8JHV7
Length = 1785
Score = 284 (105.0 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 68/223 (30%), Positives = 106/223 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKS-----GDNF 53
C+CN S+ C FD +Y +G+ GG C DCQ + G NCE+C+ ++Q N
Sbjct: 332 CHCNHHSHSCHFDMAVYRASGNVSGGVCDDCQHNTMGHNCEQCKPFFHQHPEKDIRDPNI 391
Query: 54 CTACNCNPIGSLNLQ-CNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C CNC+P+GSLN C+ G+C+CKP V G++CD+C HY E
Sbjct: 392 CEPCNCDPVGSLNGGVCDPMTDVSLGLISGQCRCKPNVEGERCDQCKQGHYGLSEDPL-G 450
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
C+ ++ P C++ G + + R+ + +N D + W L
Sbjct: 451 CQPCTCNALGTVPG----GSPCDT----DSGNCYCK-RLVTGRNCDQCLPQHWGLSNDMD 501
Query: 164 DTYPLG--HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
P HGG++N C+ G+CQC+ + G +CD+ + Y
Sbjct: 502 GCRPCDCDHGGAINNNCSPVSGQCQCREHMFGRRCDQVESGFY 544
Score = 284 (105.0 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 79/269 (29%), Positives = 116/269 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK----SGDNFCTA 56
C CNG + +C D + G CL C+ G NCE+C YY SGD+ C
Sbjct: 863 CTCNGHAEQC--DPQT-------GQCLSCRDHTTGHNCERCLGGYYGDPVLGSGDH-CRP 912
Query: 57 CNCNPIG-----SLNLQC-----NSEGRCQCKPGVTGDKCDRCDVNHY-DFGEAG--CKS 103
C C P G + C +S+ C C G G +C+ C +Y + E G C+
Sbjct: 913 CMC-PDGPGSGRQFSGACYKSPDSSQVFCVCNQGYKGARCEECAPGYYGNPHEVGGECRP 971
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD-LRRC- 161
C+CN + + +CD+ G C HTE +R GN + R+C
Sbjct: 972 CQCNSNIDMMDPESCDARTGACVKCLY------HTEGESCNRCRLGYYGNALTQSCRKCV 1025
Query: 162 --KRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNP 217
+ T N C+ + G+C C P V G CD+C + ++ GC+ C+C+P
Sbjct: 1026 CNQMGTVEEMCPSPGNCNCDLTSGQCLCLPNVVGQHCDQCAPDTWNMASGKGCEDCDCDP 1085
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
S ++ C+ + GQC CK G CR
Sbjct: 1086 NHSFGSS--CNEIMGQCSCKPGFGGRTCR 1112
Score = 247 (92.0 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 73/236 (30%), Positives = 104/236 (44%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNP-IGSLNLQ-CNSE-GRC-QCKP 79
C+ QG + G CE+C YY + C C CN I ++ + C++ G C +C
Sbjct: 940 CVCNQGYK-GARCEECAPGYYGNPHEVGGECRPCQCNSNIDMMDPESCDARTGACVKCLY 998
Query: 80 GVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKN---TP---NCDSVKGQCESAQL 130
G+ C+RC + +Y G A C+ C CN G+V+ +P NCD GQC
Sbjct: 999 HTEGESCNRCRLGYY--GNALTQSCRKCVCNQMGTVEEMCPSPGNCNCDLTSGQCLCLP- 1055
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPG 189
+ G+ H + N +G D C D P H S CN G+C CKPG
Sbjct: 1056 NVVGQ-HCDQCAPDTWNM-ASGKGCED---CDCD--P-NH--SFGSSCNEIMGQCSCKPG 1105
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G C C + E C +C+C+P G + C+ V G C C + V G +C
Sbjct: 1106 FGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQ--QCNKVTGHCVCVEGVSGPRC 1159
Score = 246 (91.7 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 74/229 (32%), Positives = 100/229 (43%)
Query: 1 CNCNGFSNRCFFDKELYN-RTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
C CN SN D E + RTG C+ C +G +C +CR YY + C C C
Sbjct: 972 CQCN--SNIDMMDPESCDARTGA---CVKCLYHTEGESCNRCRLGYYGNALTQSCRKCVC 1026
Query: 60 NPIGSLNLQCNSEGRCQCK---------PGVTGDKCDRCDVNHYDFGEA-GCKSCECNPA 109
N +G++ C S G C C P V G CD+C + ++ GC+ C+C+P
Sbjct: 1027 NQMGTVEEMCPSPGNCNCDLTSGQCLCLPNVVGQHCDQCAPDTWNMASGKGCEDCDCDPN 1086
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
S ++ C+ + GQC S + GR E R + F GN C D P G
Sbjct: 1087 HSFGSS--CNEIMGQC-SCKPGFGGRTCRECR----ELF--WGNPEVKCHACDCD--PRG 1135
Query: 170 HGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSC-EC 215
QCN G C C GV+G +CD C Y GE C+ C +C
Sbjct: 1136 IAEQ---QCNKVTGHCVCVEGVSGPRCDTC-ARGYT-GEFPQCERCHQC 1179
Score = 209 (78.6 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 70/258 (27%), Positives = 108/258 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CN N C ++ Y H +G R+ C+KC N++ S +F A
Sbjct: 297 CNHNTIGLNCERCQDFY----HDLPWRPAEG-RNTNACKKCHCNHHSHSC-HFDMAVY-R 349
Query: 61 PIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVK 113
G++ S G C C+ G C++C + E C+ C C+P GS+
Sbjct: 350 ASGNV-----SGGVCDDCQHNTMGHNCEQCKPFFHQHPEKDIRDPNICEPCNCDPVGSL- 403
Query: 114 NTPNCD---SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
N CD V S Q + V E Q ++ + C +
Sbjct: 404 NGGVCDPMTDVSLGLISGQCRCKPNVEGERCDQCKQGHYGLSEDPLGCQPCTCNALGTVP 463
Query: 171 GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNC 227
GGS C+++ G C CK VTG CD+C H+ GC+ C+C+ G++ N NC
Sbjct: 464 GGS---PCDTDSGNCYCKRLVTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINN--NC 518
Query: 228 DSVKGQCECKDNVEGAQC 245
V GQC+C++++ G +C
Sbjct: 519 SPVSGQCQCREHMFGRRC 536
Score = 196 (74.1 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 67/232 (28%), Positives = 94/232 (40%)
Query: 26 CLD-CQGDRDGPNCEKCRDNYYQKSG--DNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
CL+ Q P + CR+ + S AC C+P GSL+ C+ S G+CQC+P V
Sbjct: 735 CLENSQAVVKTPMTDICRNYIFSVSALLHQGVKACQCDPQGSLSTVCDPSGGQCQCRPNV 794
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G CDRC + F GC+ C+C+P GSV + C GQCE + GR
Sbjct: 795 VGRNCDRCAPATFLFXPQGCRPCDCSPEGSVHSY--CHEATGQCECIA-GAYGR------ 845
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKP-GVTGDKCDRCDV 200
Q + P W C+ T GH + Q C+ G ++C
Sbjct: 846 -QCDRCL-PG---YWGFPNCRPCTCN-GHAEQCDPQTGQCLSCRDHTTGHNCERCLGGYY 899
Query: 201 NHYDFGEAG-CKSCEC--NPAGSVKNTPNC----DSVKGQCECKDNVEGAQC 245
G C+ C C P + + C DS + C C +GA+C
Sbjct: 900 GDPVLGSGDHCRPCMCPDGPGSGRQFSGACYKSPDSSQVFCVCNQGYKGARC 951
>WB|WBGene00002247 [details] [associations]
symbol:lam-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0060465 "pharynx development" evidence=IMP]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] GO:GO:0009792 GO:GO:0002119
InterPro:IPR016140 SMART:SM00499 GO:GO:0010171 GO:GO:0040011
GO:GO:0040017 GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 GO:GO:0060465
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 EMBL:FO080652 RefSeq:NP_500734.3
PaxDb:O44565 EnsemblMetazoa:W03F8.5 GeneID:177292
KEGG:cel:CELE_W03F8.5 UCSC:W03F8.5 CTD:177292 WormBase:W03F8.5
NextBio:896146 Uniprot:O44565
Length = 1790
Score = 284 (105.0 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 71/232 (30%), Positives = 109/232 (46%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNL----QCNSE-GRC-QCKP 79
+C+ G C +C N++ + C C+CN G++++ C++ G C +C
Sbjct: 955 NCKSGYQGERCGECAQNHWGSPREVGGTCERCDCN--GNIDMAMEGSCDAATGECLKCLH 1012
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKSCE---CNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
G +C+ C V+ Y +G+A K+C+ CN G+ CD V GQC +
Sbjct: 1013 HTEGAQCEHC-VDGY-YGDAKLKTCQRCVCNELGTNSTKGACDRVSGQCPCHD----NII 1066
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC 195
+ + +F+ A + C + L H G +LQCN +G+CQCKPG G KC
Sbjct: 1067 GMQCDQCAENHFNLASGAGCEACGCDSNGVVLNHEGVPHLQCNIFDGQCQCKPGRGGRKC 1126
Query: 196 DRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
D+C+ ++ GC CECNP GS + C G CEC+ GA C
Sbjct: 1127 DQCEDLYWGDPTTPDGCHRCECNPTGS--KSLQCHRNNGTCECQAGSGGALC 1176
Score = 268 (99.4 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 70/237 (29%), Positives = 110/237 (46%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKP-G 80
GG C +C+ + G C++C Y G + C C+C+ +GSL C+ + G+C C+ G
Sbjct: 795 GGQC-ECKPNVVGRRCDQCAIGTYG-FGPSGCKKCDCDAVGSLGNDCDKQSGQCVCREKG 852
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
+ G +C++C + F E C++C+CN ++ CD G C + + G H
Sbjct: 853 IYGRQCNQCQPGFWGFPE--CRTCQCNDHANI-----CDQSSGACIECRDLTTG--HYCD 903
Query: 141 RVQSRKNFDPA-GNRIWDLRRCKRDTYPLG---HGGSLNLQCNSEGR----CQCKPGVTG 192
R Q DP G I + C P H + L+ + C CK G G
Sbjct: 904 RCQDGYYGDPRLGVGI-PCKPCPCPGGPTSGYQHADTCYLRNSGNNTQDIVCNCKSGYQG 962
Query: 193 DKCDRCDVNHYDFG-EAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
++C C NH+ E G C+ C+CN + +CD+ G+C +C + EGAQC
Sbjct: 963 ERCGECAQNHWGSPREVGGTCERCDCNGNIDMAMEGSCDAATGECLKCLHHTEGAQC 1019
Score = 257 (95.5 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 65/209 (31%), Positives = 93/209 (44%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N + CNC+ GS++ CN +G +C+CKP V G +CD+C + Y FG +GCK C+C+ G
Sbjct: 774 NKTSECNCDATGSVSGICNVQGGQCECKPNVVGRRCDQCAIGTYGFGPSGCKKCDCDAVG 833
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
S+ N +CD GQC + GR Q + F W C+ T
Sbjct: 834 SLGN--DCDKQSGQCVCREKGIYGRQCN----QCQPGF-------WGFPECR--TCQCND 878
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPN 226
++ Q +S +C+ TG CDRC +Y G CK C C P G +
Sbjct: 879 HANICDQ-SSGACIECRDLTTGHYCDRCQDGYYGDPRLGVGIPCKPCPC-PGGPTSGYQH 936
Query: 227 CDSV----KGQ------CECKDNVEGAQC 245
D+ G C CK +G +C
Sbjct: 937 ADTCYLRNSGNNTQDIVCNCKSGYQGERC 965
Score = 236 (88.1 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 69/227 (30%), Positives = 101/227 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHG-GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
C+CNG N D + G CL C +G CE C D YY + C C C
Sbjct: 986 CDCNG--N---IDMAMEGSCDAATGECLKCLHHTEGAQCEHCVDGYYGDAKLKTCQRCVC 1040
Query: 60 NPIGSLNLQ--CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSVKN- 114
N +G+ + + C+ G+C C + G +CD+C NH++ AGC++C C+ G V N
Sbjct: 1041 NELGTNSTKGACDRVSGQCPCHDNIIGMQCDQCAENHFNLASGAGCEACGCDSNGVVLNH 1100
Query: 115 --TPN--CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
P+ C+ GQC+ RG + + + DP RC+ + P G
Sbjct: 1101 EGVPHLQCNIFDGQCQCKP--GRGGRKCD-QCEDLYWGDPTTPD--GCHRCECN--PTG- 1152
Query: 171 GGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC-EC 215
S +LQC+ + G C+C+ G G C+ C Y C C EC
Sbjct: 1153 --SKSLQCHRNNGTCECQAGSGGALCNEC-ARGYTGQWPYCNPCGEC 1196
Score = 228 (85.3 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 60/200 (30%), Positives = 89/200 (44%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQ---KSGDN--FCTACNCNPIGSLNLQ-CNSE---- 72
GG C DC + G NCE+C+ +Y+ ++ D+ C C C+ GS N C E
Sbjct: 368 GGVCDDCMHNTQGKNCEQCKPFFYRDPRRTIDDPHVCLPCECDKAGSQNKGICEGEEDAE 427
Query: 73 -----GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQ 124
G+C CK V G++CDRC +++ E GC +C CN G+ N CD G
Sbjct: 428 RGLVAGKCYCKTNVDGNRCDRCKNGYWNLTETNVDGCVACTCNLLGTYNNE-GCDKYTGM 486
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGR 183
C +L V E Q + + C D GGS + C + G+
Sbjct: 487 CTCKRL-----VTGENCDQCLPEHYGLSEHVDGCKACDCDI-----GGSYDNTCEITTGQ 536
Query: 184 CQCKPGVTGDKCDRCDVNHY 203
C+C+ G +G +C+ D + Y
Sbjct: 537 CKCREGFSGRRCETADSSFY 556
Score = 224 (83.9 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 78/265 (29%), Positives = 112/265 (42%)
Query: 1 CNC--NGFSNRCFFDKELYN----RTGHG---GHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
C C N C K YN R G C C +R C R Y+ SG
Sbjct: 307 CECMHNTEGLNCEKCKAFYNDLPWRPAIGDEKNECRQCNCNRHALRCHFDRA-VYESSG- 364
Query: 52 NFCTACNCNPIGSLNLQCNSEGR-C-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
F + C+ + N++G+ C QCKP D D H C CEC+ A
Sbjct: 365 -FVSGGVCD-----DCMHNTQGKNCEQCKPFFYRDPRRTIDDPHV------CLPCECDKA 412
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD---TY 166
GS +N C+ G+ ++ + G+ + + V + D N W+L D
Sbjct: 413 GS-QNKGICE---GEEDAERGLVAGKCYCKTNVDGNR-CDRCKNGYWNLTETNVDGCVAC 467
Query: 167 PLGHGGSLNLQ-CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVK 222
G+ N + C+ G C CK VTG+ CD+C HY E GCK+C+C+ GS
Sbjct: 468 TCNLLGTYNNEGCDKYTGMCTCKRLVTGENCDQCLPEHYGLSEHVDGCKACDCDIGGSYD 527
Query: 223 NTPNCDSVKGQCECKDNVEGAQCRS 247
NT C+ GQC+C++ G +C +
Sbjct: 528 NT--CEITTGQCKCREGFSGRRCET 550
Score = 211 (79.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 72/263 (27%), Positives = 108/263 (41%)
Query: 1 CNCNG---FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTAC 57
C+C+ N C DK+ G C+ + G C +C+ ++ G C C
Sbjct: 827 CDCDAVGSLGNDC--DKQ-------SGQCVCREKGIYGRQCNQCQPGFW---GFPECRTC 874
Query: 58 NCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSV 112
CN N+ S G C +C+ TG CDRC +Y G CK C C P G
Sbjct: 875 QCND--HANICDQSSGACIECRDLTTGHYCDRCQDGYYGDPRLGVGIPCKPCPC-PGGPT 931
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR-----CKRDTYP 167
+ D+ + S + + + Q + + A N W R C+R
Sbjct: 932 SGYQHADTCYLR-NSGNNTQDIVCNCKSGYQGERCGECAQNH-WGSPREVGGTCERCDCN 989
Query: 168 LGHGGSLNLQCNSE-GRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCE---CNPAGSVK 222
++ C++ G C +C G +C+ C V+ Y +G+A K+C+ CN G+
Sbjct: 990 GNIDMAMEGSCDAATGECLKCLHHTEGAQCEHC-VDGY-YGDAKLKTCQRCVCNELGTNS 1047
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
CD V GQC C DN+ G QC
Sbjct: 1048 TKGACDRVSGQCPCHDNIIGMQC 1070
>ZFIN|ZDB-GENE-081030-4 [details] [associations]
symbol:lamb2 "laminin, beta 2 (laminin S)"
species:7955 "Danio rerio" [GO:0016203 "muscle attachment"
evidence=IMP] [GO:0070831 "basement membrane assembly"
evidence=IMP] [GO:0061053 "somite development" evidence=IMP]
ZFIN:ZDB-GENE-081030-4 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 HOGENOM:HOG000007552
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:3913 KO:K06243 OrthoDB:EOG4KSPHW
EMBL:AL953864 IPI:IPI00499348 RefSeq:NP_001229974.1
UniGene:Dr.158661 UniGene:Dr.78258 Ensembl:ENSDART00000012166
Ensembl:ENSDART00000147326 GeneID:337767 KEGG:dre:337767
NextBio:20812405 Uniprot:B7ZDA6
Length = 1782
Score = 283 (104.7 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 74/265 (27%), Positives = 112/265 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--G-DNFCTAC 57
C CNG ++ C + RTG CL+C+ + G CE+C + YY G + C C
Sbjct: 861 CQCNGHADEC------HQRTGA---CLNCRSNTAGDKCERCANGYYGNPVLGLGSQCRPC 911
Query: 58 NC--NPIGSLNL--QCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSCE 105
C P + C + R C C G TG +CD C ++ D + G C+ C
Sbjct: 912 PCPEGPNSGRHFAASCYQDNRSQQVVCNCNQGYTGPRCDECAPGYFGDPSKPGGQCQPCR 971
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ + + +CD GQC ++ G + V + A R + R+C +
Sbjct: 972 CSNNIDLSDPESCDKRTGQCLKCLYNTEG---PDCSVCRSGYYGDASRR--NCRKCTCNF 1026
Query: 166 YPLGHGGSLNLQ-C---NSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGS 220
L+ C + G+CQC P V G CD C N ++ GC+ C C+P +
Sbjct: 1027 LGTERSQCLSRDDCVCQRATGQCQCLPNVIGQTCDHCAPNSWNLASGQGCEPCACDPNNA 1086
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
T C+ GQC+C+ G C
Sbjct: 1087 Y--TSACNEFTGQCQCRVGFGGKTC 1109
Score = 272 (100.8 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 73/227 (32%), Positives = 102/227 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C C+ +N D E ++ G CL C + +GP+C CR YY + C C CN
Sbjct: 970 CRCS--NNIDLSDPESCDK--RTGQCLKCLYNTEGPDCSVCRSGYYGDASRRNCRKCTCN 1025
Query: 61 PIGSLNLQCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAG 110
+G+ QC S G+CQC P V G CD C N ++ GC+ C C+P
Sbjct: 1026 FLGTERSQCLSRDDCVCQRATGQCQCLPNVIGQTCDHCAPNSWNLASGQGCEPCACDPNN 1085
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
+ T C+ GQC+ ++ G+ T+ Q DP R+ R C D P G
Sbjct: 1086 AY--TSACNEFTGQCQ-CRVGFGGKTCTDC--QENHWGDP---RVL-CRACDCD--PRGI 1134
Query: 171 GGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC-EC 215
S QCN G C C+ GV+G +CD+C + CK C +C
Sbjct: 1135 ESS---QCNRMTGHCVCQQGVSGVRCDQC-ARGFSGTFPDCKPCHQC 1177
Score = 267 (99.0 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 70/236 (29%), Positives = 103/236 (43%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GG C C+ + G CEKC Y G + C C C+ GS + C+ G+C C+PG
Sbjct: 783 GGQCR-CRPNISGRRCEKCAPGAYG-FGPSGCKLCECSLEGSQSRFCDLYSGQCPCRPGA 840
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
G +CD C H+ F C+ C+CN G + C G C + + ++ G +
Sbjct: 841 YGQRCDGCQAGHWGF--PNCRPCQCN--G---HADECHQRTGACLNCRSNTAGD-----K 888
Query: 142 VQSRKNFDPAGNRIWDL-RRCKRDTYPLG--HGGSLNLQCNSEGR-----CQCKPGVTGD 193
+ N GN + L +C+ P G G C + R C C G TG
Sbjct: 889 CERCAN-GYYGNPVLGLGSQCRPCPCPEGPNSGRHFAASCYQDNRSQQVVCNCNQGYTGP 947
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+CD C ++ D + G C+ C C+ + + +CD GQC +C N EG C
Sbjct: 948 RCDECAPGYFGDPSKPGGQCQPCRCSNNIDLSDPESCDKRTGQCLKCLYNTEGPDC 1003
Score = 237 (88.5 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 65/204 (31%), Positives = 95/204 (46%)
Query: 56 ACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
AC C+P GSL+ +C+ G +C+C+P ++G +C++C Y FG +GCK CEC+ GS
Sbjct: 766 ACECDPQGSLSSECDVRGGQCRCRPNISGRRCEKCAPGAYGFGPSGCKLCECSLEGSQSR 825
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
CD GQC + + G+ R + AG+ W C R GH
Sbjct: 826 F--CDLYSGQCP-CRPGAYGQ---------RCDGCQAGH--WGFPNC-RPCQCNGHAD-- 868
Query: 175 NLQCNSE-GRC-QCKPGVTGDKCDRCDVNHYDFGEAG----CKSCECNPAG--SVKN-TP 225
+C+ G C C+ GDKC+RC +Y G C+ C C P G S ++
Sbjct: 869 --ECHQRTGACLNCRSNTAGDKCERCANGYYGNPVLGLGSQCRPCPC-PEGPNSGRHFAA 925
Query: 226 NC--DSVKGQ--CECKDNVEGAQC 245
+C D+ Q C C G +C
Sbjct: 926 SCYQDNRSQQVVCNCNQGYTGPRC 949
Score = 224 (83.9 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 57/227 (25%), Positives = 98/227 (43%)
Query: 28 DCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNC-NPIGSLNLQ-CNSE-GRC-QCKPG 80
+C GP C++C Y+ K G C C C N I + + C+ G+C +C
Sbjct: 939 NCNQGYTGPRCDECAPGYFGDPSKPGGQ-CQPCRCSNNIDLSDPESCDKRTGQCLKCLYN 997
Query: 81 VTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE 139
G C C +Y D C+ C CN G+ ++ C S + C + + + +
Sbjct: 998 TEGPDCSVCRSGYYGDASRRNCRKCTCNFLGTERS--QCLS-RDDCVCQRATGQCQCLPN 1054
Query: 140 LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
+ Q+ + P + + C + + CN G+CQC+ G G C C
Sbjct: 1055 VIGQTCDHCAPNSWNLASGQGC--EPCACDPNNAYTSACNEFTGQCQCRVGFGGKTCTDC 1112
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
NH+ C++C+C+P G ++++ C+ + G C C+ V G +C
Sbjct: 1113 QENHWGDPRVLCRACDCDPRG-IESS-QCNRMTGHCVCQQGVSGVRC 1157
Score = 201 (75.8 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 65/226 (28%), Positives = 99/226 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-SGD----NF 53
CNCNG SN+C FD +Y TG+ GG C +C + G NCE C+ YYQ + D
Sbjct: 331 CNCNGHSNQCHFDMAVYLATGNISGGVCDNCLHNTMGSNCESCKPFYYQDPTRDIRDPGV 390
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C AC+C+P GS N +G G+ +C RC N + C C+ G
Sbjct: 391 CVACDCDPDGSKNGGV-CDGHDDPSLGMIAGQC-RCKDN---VEGSRCDKCKPGFFGLSA 445
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI---WDLRRCKRDTYPLGH 170
+ P +G C+ + RG V + D R+ +C + + L H
Sbjct: 446 SDP-----RG-CQPCKCDPRGTVSGSSQCDPVSG-DCFCKRLVTGHSCNQCLPEHWALSH 498
Query: 171 ------------GGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
GG+ QC+ E G+CQC+ + G +C++ + ++
Sbjct: 499 DTSGCRGCDCDVGGATENQCSMETGQCQCRSHMIGRQCNQVESGYF 544
Score = 194 (73.4 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 65/227 (28%), Positives = 93/227 (40%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY-- 94
C+KC N + N C + + N+ S G C C G C+ C +Y
Sbjct: 328 CKKCNCNGHS----NQCHFDMAVYLATGNI---SGGVCDNCLHNTMGSNCESCKPFYYQD 380
Query: 95 ---DFGEAG-CKSCECNPAGSVKNTPNCDS--------VKGQCESAQLSSRGRVHT-ELR 141
D + G C +C+C+P GS KN CD + GQC R +
Sbjct: 381 PTRDIRDPGVCVACDCDPDGS-KNGGVCDGHDDPSLGMIAGQCRCKDNVEGSRCDKCKPG 439
Query: 142 VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDV 200
DP G + CK D G S QC+ G C CK VTG C++C
Sbjct: 440 FFGLSASDPRG-----CQPCKCDPRGTVSGSS---QCDPVSGDCFCKRLVTGHSCNQCLP 491
Query: 201 NHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
H+ +GC+ C+C+ G+ +N C GQC+C+ ++ G QC
Sbjct: 492 EHWALSHDTSGCRGCDCDVGGATEN--QCSMETGQCQCRSHMIGRQC 536
Score = 163 (62.4 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 64/239 (26%), Positives = 96/239 (40%)
Query: 21 GHGGHCLDCQGDRD---GPNCEKCRDNYYQKSGDNFCTACN--CNPIGSLNLQCNSEGRC 75
GH C +G RD G +C + K G N C C+ N + + + C
Sbjct: 271 GHASECAPIEGIRDDIEGMVHGRCVCKHNTK-GLN-CEQCDDFYNDLPWRPAEGRNTNAC 328
Query: 76 Q-CKPGVTGDKCDRCDVNHY----DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
+ C ++C D+ Y + C +C N GS NC+S C+
Sbjct: 329 KKCNCNGHSNQC-HFDMAVYLATGNISGGVCDNCLHNTMGS-----NCES----CKPFYY 378
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG-SLNLQCNSEGRCQCKPG 189
R + V + DP G++ + C GH SL + G+C+CK
Sbjct: 379 QDPTRDIRDPGVCVACDCDPDGSKNGGV--CD------GHDDPSLGMIA---GQCRCKDN 427
Query: 190 VTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
V G +CD+C + + GC+ C+C+P G+V + CD V G C CK V G C
Sbjct: 428 VEGSRCDKCKPGFFGLSASDPRGCQPCKCDPRGTVSGSSQCDPVSGDCFCKRLVTGHSC 486
Score = 154 (59.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 41/150 (27%), Positives = 67/150 (44%)
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C+ + +P ++ + C + + G +CEC+P GS+ + CD GQC
Sbjct: 732 RCHETAKSVSRPQMS-EVCAKLITSMSALINDGALACECDPQGSLSS--ECDVRGGQCRC 788
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQC 186
S GR E F P+G ++ + C + GS + C+ G+C C
Sbjct: 789 RPNIS-GR-RCEKCAPGAYGFGPSGCKLCE---CSLE-------GSQSRFCDLYSGQCPC 836
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
+PG G +CD C H+ F C+ C+CN
Sbjct: 837 RPGAYGQRCDGCQAGHWGF--PNCRPCQCN 864
>UNIPROTKB|F1P4B9 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02005946
EMBL:AADN02005947 EMBL:AADN02005948 EMBL:AADN02005949
EMBL:AADN02005950 IPI:IPI00810572 Ensembl:ENSGALT00000018614
ArrayExpress:F1P4B9 Uniprot:F1P4B9
Length = 551
Score = 259 (96.2 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 52/151 (34%), Positives = 83/151 (54%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C CNG ++ C FD + + +G+ GG C +CQ + +G +C++C+ +Y+ S +
Sbjct: 265 CKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDA 324
Query: 54 CTACNCNPIGSLNLQ------CN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C+P+GS L C+ S G C CKPGV G +CDRC ++ FG +GC+ C+C
Sbjct: 325 CKPCSCHPLGSAALPLGPRTFCDPSTGDCPCKPGVAGPRCDRCLPGYWGFGTSGCRPCDC 384
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
A S C + G C S++ ++ H
Sbjct: 385 --ARS------CHPLTGDCHSSRTTAPRAPH 407
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 62/210 (29%), Positives = 91/210 (43%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFC---TA---C-NCNPIGSLNLQCNSEG 73
GH HC+ +G R P + ++ G C TA C +C P+ + ++G
Sbjct: 199 GHADHCVPVRGFR--P--VRAAGAFHVVHGKCMCKHNTAGPHCQHCAPLYNDRPWQAADG 254
Query: 74 RCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD-SVKGQCESAQLS 131
+ KC+ D H+D +A S N +G V + NC + +GQ Q
Sbjct: 255 KTGAPRECQSCKCNGHADTCHFDM-DAWLASG--NRSGGVCD--NCQHNTEGQ--HCQRC 307
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQ----CN-SEGRCQ 185
G + +LR K F CK +PLG +L L C+ S G C
Sbjct: 308 KPG-FYRDLR----KPFSAPD-------ACKPCSCHPLG-SAALPLGPRTFCDPSTGDCP 354
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 215
CKPGV G +CDRC ++ FG +GC+ C+C
Sbjct: 355 CKPGVAGPRCDRCLPGYWGFGTSGCRPCDC 384
Score = 108 (43.1 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 31/77 (40%), Positives = 36/77 (46%)
Query: 175 NLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT--PN--CD 228
N Q N+EG+ CQ CKPG D R + D CK C C+P GS P CD
Sbjct: 294 NCQHNTEGQHCQRCKPGFYRDL--RKPFSAPD----ACKPCSCHPLGSAALPLGPRTFCD 347
Query: 229 SVKGQCECKDNVEGAQC 245
G C CK V G +C
Sbjct: 348 PSTGDCPCKPGVAGPRC 364
Score = 77 (32.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 32/121 (26%), Positives = 50/121 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHG------GHCLDCQGDRDGPNCEKC----RDNYYQ--- 47
C CNG ++ C + G G C+ C+ + GP+C+ C D +Q
Sbjct: 195 CFCNGHADHCVPVRGFRPVRAAGAFHVVHGKCM-CKHNTAGPHCQHCAPLYNDRPWQAAD 253
Query: 48 -KSG-DNFCTACNCNPIGSLNLQCNSEGRCQCKPGV-TGDKCDRCDVNHYDFGEAGCKSC 104
K+G C +C CN G + C+ + G +G CD C H G+ C+ C
Sbjct: 254 GKTGAPRECQSCKCN--GHADT-CHFDMDAWLASGNRSGGVCDNCQ--HNTEGQH-CQRC 307
Query: 105 E 105
+
Sbjct: 308 K 308
Score = 36 (17.7 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 183 RCQCKPGVTGDKCDRCDVNH 202
+C+CK V G+ C + +
Sbjct: 424 KCECKEQVLGNSKVFCGMKY 443
>UNIPROTKB|F1SPT5 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 EMBL:CU856115
Ensembl:ENSSSCT00000012455 ArrayExpress:F1SPT5 Uniprot:F1SPT5
Length = 1642
Score = 280 (103.6 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 78/238 (32%), Positives = 109/238 (45%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
HGG CL C+ G C C YY G C AC C+P G+L+ C + G+C C+ G
Sbjct: 800 HGGQCL-CKPAVVGRRCNICAPGYYG-FGPTGCQACQCSPEGALSGLCEATSGQCPCRTG 857
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CDRC + F C+ C CN G + CD+ G C + + G H E
Sbjct: 858 AFGLRCDRCQRGQWGF--PSCRPCVCN--G---HADECDTHTGTCLGCRDHTGGE-HCE- 908
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL--QCNSEGR-----CQCKPGVTGD 193
R + + DP R+ +C+ P G G + C+ +G C C+ G TG
Sbjct: 909 RCIAGFHGDP---RLPYGGQCRPCPCPEGPGSQRHFATSCHRDGYSQQIVCHCRAGYTGL 965
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNT-PN-CDSVKGQC-ECKDNVEGAQC 245
+C+ C H+ D G C+ CEC G++ T P+ CD GQC C + EG C
Sbjct: 966 RCEACAPGHFGDPSRPGGRCQPCEC---GNIDPTDPDACDPHSGQCLRCLHHTEGPHC 1020
Score = 240 (89.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 62/186 (33%), Positives = 85/186 (45%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK--- 78
H G CL C +GP+C C+ ++ ++ C CNCN +G+ QC S RC C
Sbjct: 1004 HSGQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCNCNLLGTDPQQCPSPDRCNCDQSS 1063
Query: 79 ---PGVTG-D-KCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
P ++ D CDRC + GC+ C C+P+ S P C+ GQC +
Sbjct: 1064 GQCPCLSQRDLSCDRCAPSWNLTSGRGCQPCACHPSRS--RGPTCNEFTGQCH-CRTGFG 1120
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
GR +E Q DP R C D P G QC+ S G C C+PGV+G
Sbjct: 1121 GRTCSEC--QELHWGDPG----LQCRACDCD--PRGIDTP---QCHRSTGHCSCRPGVSG 1169
Query: 193 DKCDRC 198
+CD+C
Sbjct: 1170 VRCDQC 1175
Score = 221 (82.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 76/267 (28%), Positives = 105/267 (39%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C D H G CL C+ G +CE+C ++ + C C
Sbjct: 879 CVCNGHADEC--DT-------HTGTCLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPC 929
Query: 58 NC--NPIGSLN---LQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P GS C+ +G C C+ G TG +C+ C H+ D G C+ C
Sbjct: 930 PCPEGP-GSQRHFATSCHRDGYSQQIVCHCRAGYTGLRCEACAPGHFGDPSRPGGRCQPC 988
Query: 105 ECNPAGSVKNT-PN-CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
EC G++ T P+ CD GQC + G H + F R RC
Sbjct: 989 EC---GNIDPTDPDACDPHSGQCLRCLHHTEGP-HC---AHCKPGFHGQAAR-QSCHRCN 1040
Query: 163 RD---TYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 218
+ T P C+ S G+C C CDRC + GC+ C C+P+
Sbjct: 1041 CNLLGTDPQQCPSPDRCNCDQSSGQCPCL-SQRDLSCDRCAPSWNLTSGRGCQPCACHPS 1099
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
S P C+ GQC C+ G C
Sbjct: 1100 RS--RGPTCNEFTGQCHCRTGFGGRTC 1124
Score = 213 (80.0 bits), Expect = 8.0e-16, P = 8.0e-16
Identities = 73/264 (27%), Positives = 104/264 (39%)
Query: 1 CNC-NGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNYY---QKSGDNFCT 55
C C G ++ F + R G+ + C+ G CE C ++ + G C
Sbjct: 929 CPCPEGPGSQRHFATSCH-RDGYSQQIVCHCRAGYTGLRCEACAPGHFGDPSRPGGR-CQ 986
Query: 56 ACNCNPIGSLNLQ-CNSE-GRC-QCKPGVTGDKCDRCDVN-HYDFGEAGCKSCECNPAGS 111
C C I + C+ G+C +C G C C H C C CN G+
Sbjct: 987 PCECGNIDPTDPDACDPHSGQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCNCNLLGT 1046
Query: 112 -VKNTP-----NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
+ P NCD GQC LS R +L S P+ N + R C+
Sbjct: 1047 DPQQCPSPDRCNCDQSSGQCPC--LSQR-----DL---SCDRCAPSWN-LTSGRGCQPCA 1095
Query: 166 -YPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSV 221
+P G CN G+C C+ G G C C H+ G+ G C++C+C+P G
Sbjct: 1096 CHPSRSRGPT---CNEFTGQCHCRTGFGGRTCSECQELHW--GDPGLQCRACDCDPRGI- 1149
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
+TP C G C C+ V G +C
Sbjct: 1150 -DTPQCHRSTGHCSCRPGVSGVRC 1172
Score = 200 (75.5 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 56/205 (27%), Positives = 93/205 (45%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +CN G +C CKP V G +C+ C +Y FG GC++C+C+P G
Sbjct: 780 NGALPCQCDPQGSLSSECNPHGGQCLCKPAVVGRRCNICAPGYYGFGPTGCQACQCSPEG 839
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
++ C++ GQC + + G + + + + F + + + DT+
Sbjct: 840 ALSGL--CEATSGQCP-CRTGAFG-LRCDRCQRGQWGFPSCRPCVCNGHADECDTHT--- 892
Query: 171 GGSLNLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA-GSVKN-TPN 226
G L + ++ G C+ C G GD +G C+ C C GS ++ +
Sbjct: 893 GTCLGCRDHTGGEHCERCIAGFHGDP-------RLPYG-GQCRPCPCPEGPGSQRHFATS 944
Query: 227 C--DSVKGQ--CECKDNVEGAQCRS 247
C D Q C C+ G +C +
Sbjct: 945 CHRDGYSQQIVCHCRAGYTGLRCEA 969
Score = 197 (74.4 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 57/189 (30%), Positives = 83/189 (43%)
Query: 71 SEGRCQ-CKPGVTGDKCDRCDVNHY-----DFGEAG-CKSCECNPAGSVKN---TPNCDS 120
S G C C+ G C+ C Y D + G C+SC+C+P GS P+ D
Sbjct: 372 SGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPGVCRSCDCDPMGSQDGGRCDPHDDP 431
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNF-DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
G S Q + V Q R F + + +RC+ DT GG+ C+
Sbjct: 432 ALGLV-SGQCRCKEHVVGSRCQQCRDGFFGLSASDALGCQRCQCDTRGTVPGGT---PCD 487
Query: 180 -SEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+ G C CK VTG C+RC H+ GC+ C+C+ G++ P C+ GQC C
Sbjct: 488 RNSGACFCKRLVTGRGCNRCLPGHWGLSHDLLGCRPCDCDIGGALD--PQCNEATGQCRC 545
Query: 237 KDNVEGAQC 245
+ ++ G C
Sbjct: 546 RQHMVGRCC 554
Score = 169 (64.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 36/113 (31%), Positives = 55/113 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSL--NLQCN-SEGRCQCK 78
G C C+ G C++CRD ++ S + C C C+ G++ C+ + G C CK
Sbjct: 438 GQCR-CKEHVVGSRCQQCRDGFFGLSASDALGCQRCQCDTRGTVPGGTPCDRNSGACFCK 496
Query: 79 PGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
VTG C+RC H+ GC+ C+C+ G++ P C+ GQC Q
Sbjct: 497 RLVTGRGCNRCLPGHWGLSHDLLGCRPCDCDIGGALD--PQCNEATGQCRCRQ 547
Score = 166 (63.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+G ++ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 349 CECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPGV 408
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C +C+C+P+GS + +C+ G+C+CK V G +C +C + +
Sbjct: 409 CRSCDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSASDALG 468
Query: 104 CE 105
C+
Sbjct: 469 CQ 470
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 45/165 (27%), Positives = 77/165 (46%)
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
C +C+C+P+GS + +C+ G+C+CK V G +C +C + + G
Sbjct: 409 CRSCDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSASDALG 468
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQL-SSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
C+ C+C+ G+V CD G C +L + RG + L + D G R
Sbjct: 469 CQRCQCDTRGTVPGGTPCDRNSGACFCKRLVTGRG-CNRCLPGHWGLSHDLLG-----CR 522
Query: 160 RCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C D GG+L+ QCN + G+C+C+ + G C++ ++
Sbjct: 523 PCDCDI-----GGALDPQCNEATGQCRCRQHMVGRCCEQVQPGYF 562
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/164 (29%), Positives = 71/164 (43%)
Query: 101 CKSCECNP-AGSVK-----NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF--DPAG 152
CK CEC+ A S + + G C+ Q ++ GR H EL R F DP
Sbjct: 346 CKKCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGR-HCEL---CRPFFYRDPTK 401
Query: 153 NRIWDLRRCKR-DTYPLGH--GGSLNLQCNS-----EGRCQCKPGVTGDKCDRCDVNHYD 204
+ + D C+ D P+G GG + + G+C+CK V G +C +C +
Sbjct: 402 D-LRDPGVCRSCDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFG 460
Query: 205 FGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ GC+ C+C+ G+V CD G C CK V G C
Sbjct: 461 LSASDALGCQRCQCDTRGTVPGGTPCDRNSGACFCKRLVTGRGC 504
Score = 50 (22.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 97 GEAGCKSCECNPAG--SVKNTPNCD--SVKGQCESAQLS-SRGRVHTELRVQ 143
G+A C + C AG P C S G A L+ R R HT+ +Q
Sbjct: 1414 GDAPCATSPCGGAGCRDEDGQPRCGGLSCSGAAAMADLALGRAR-HTQAELQ 1464
Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 14/57 (24%), Positives = 19/57 (33%)
Query: 165 TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
T+ L G L C S G C C D G+ C C+ A ++
Sbjct: 1397 THTLSLTGINELVCGSPGDAPCATS----PCGGAGCRDED-GQPRCGGLSCSGAAAM 1448
>UNIPROTKB|F1NQ51 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:AADN02021360
EMBL:AADN02021358 EMBL:AADN02021359 IPI:IPI00597868
Ensembl:ENSGALT00000024287 Uniprot:F1NQ51
Length = 3356
Score = 279 (103.3 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 73/232 (31%), Positives = 109/232 (46%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G CL C+ G C+ C+ ++ C AC C+P+GS + C + G+C+C+ VT
Sbjct: 508 GRCL-CRSGVVGLQCDSCQPGHHSFP---VCEACQCSPLGSRHSICEPTTGQCECQTNVT 563
Query: 83 GDKCDRC--DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CDRC ++ + E G S ECNP+GSV DS G C+ Q G ++
Sbjct: 564 GRQCDRCISAAPNFPYCE-GINS-ECNPSGSV------DSHSGYCQCLQ-HVEGPTCSKC 614
Query: 141 R--VQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDR 197
+ + +P G C+ D G +C E GRC CK V GD C+
Sbjct: 615 KPLYWNLAEENPEG-----CTACQCDVSGTLSGVG---ECQQETGRCYCKSNVCGDFCNT 666
Query: 198 CDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C+ +Y GCK C+C+ GS+ C G C+C+++V G C+
Sbjct: 667 CEAGYYALENKNYFGCKGCQCDVGGSISFA--CAEPSGACQCREHVVGKACQ 716
Score = 270 (100.1 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 72/236 (30%), Positives = 103/236 (43%)
Query: 13 DKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS- 71
DK T GG+ +R C+ + +N CNC+ GS++ C+
Sbjct: 1234 DKSFDFITQCGGNSFHIDPERSSAFCKDSARSLVAFY-NNGAVPCNCHSEGSMSPTCSPL 1292
Query: 72 EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C+P V G +C RC +Y F CK C C CD + G+C +
Sbjct: 1293 GGQCICRPNVIGRQCSRCQTGYYGF--PSCKLCNCGQR-------LCDDLTGKC----IC 1339
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPG 189
V + V R F L C+ + G + +C + G+C+CKPG
Sbjct: 1340 PPRTVKPKCEVCERYYFS-----YHPLAGCESCNCSERGVVNAARPECEKNNGQCKCKPG 1394
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G +CDRC YDF C C+CN G+ + CD G C CK+NVEGA+C
Sbjct: 1395 IRGRQCDRCAPGTYDF--PNCIPCKCNRDGTEPDV--CDPQTGICLCKENVEGAEC 1446
Score = 270 (100.1 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 85/272 (31%), Positives = 120/272 (44%)
Query: 1 CNCNGFSNRCFFD------KELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D +E N GH GG C++CQ + G NCEKC YY+ G
Sbjct: 355 CNCHGHATDCYYDADVDQRRESLNIHGHYEGGGVCINCQHNTAGVNCEKCAKGYYRPYGV 414
Query: 51 ----DNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
+ C +C C+ + + S GRC CK G+ C+ C Y F K
Sbjct: 415 PARAPDGCISCPCDLERAEGCEEGS-GRCFCKWNFQGENCEHCADGFYSFPFCIRKDIPV 473
Query: 107 ------NP----AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW 156
NP AG + C+SV Q E R + + + P +
Sbjct: 474 YPFTSPNPRDAIAGDI-TVCECNSVGTQPEVCDFLGRCLCRSGVVGLQCDSCQPGHHSFP 532
Query: 157 DLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC--DVNHYDFGEAGCKSC 213
C+ PLG S+ C + G+C+C+ VTG +CDRC ++ + E G S
Sbjct: 533 VCEACQCS--PLGSRHSI---CEPTTGQCECQTNVTGRQCDRCISAAPNFPYCE-GINS- 585
Query: 214 ECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
ECNP+GSV DS G C+C +VEG C
Sbjct: 586 ECNPSGSV------DSHSGYCQCLQHVEGPTC 611
Score = 246 (91.7 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 76/253 (30%), Positives = 104/253 (41%)
Query: 3 CNGFSNRCFFDKELYNRTGHG-GHCLDCQGDRDGPNCEKCRDNYYQKSGDN-------FC 54
C S RCF +N G HC D G P C + Y + N
Sbjct: 435 CEEGSGRCFCK---WNFQGENCEHCAD--GFYSFPFCIRKDIPVYPFTSPNPRDAIAGDI 489
Query: 55 TACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 114
T C CN +G+ C+ GRC C+ GV G +CD C H+ F C++C+C+P GS +
Sbjct: 490 TVCECNSVGTQPEVCDFLGRCLCRSGVVGLQCDSCQPGHHSFPV--CEACQCSPLGSRHS 547
Query: 115 TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
C+ GQCE Q + GR + + + NF P I C H G
Sbjct: 548 I--CEPTTGQCE-CQTNVTGR-QCDRCISAAPNF-PYCEGINS--ECNPSGSVDSHSGYC 600
Query: 175 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
QC Q G T KC N + GC +C+C+ +G++ C G+C
Sbjct: 601 --QC-----LQHVEGPTCSKCKPLYWNLAEENPEGCTACQCDVSGTLSGVGECQQETGRC 653
Query: 235 ECKDNVEGAQCRS 247
CK NV G C +
Sbjct: 654 YCKSNVCGDFCNT 666
Score = 205 (77.2 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 44/131 (33%), Positives = 64/131 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC ++ TG C++CQ + G CE C+D Y+ + C C C
Sbjct: 1700 CNCNGNSNRC------HDGTGK---CINCQYNTAGEKCELCKDGYFGDATQGSCRICPCP 1750
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYDFGE--AG-CKSCECNPAGSVKN 114
C + G +C CK G TG +C+RC ++ + G C+ C CN G + +
Sbjct: 1751 YTNRFATGCVANGGEIQCLCKEGYTGVRCERCAPGYFGNPQKYGGYCQKCNCNNNGQLAS 1810
Query: 115 TPNCDSVKGQC 125
CD + G+C
Sbjct: 1811 ---CDRLTGEC 1818
Score = 178 (67.7 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 55/208 (26%), Positives = 86/208 (41%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACN--CNPIGSLNLQCNSEGRCQCKP 79
G C +CQ + G C++C + NF C N CNP GS++ + G CQC
Sbjct: 554 GQC-ECQTNVTGRQCDRCIS-----AAPNFPYCEGINSECNPSGSVD---SHSGYCQCLQ 604
Query: 80 GVTGDKCDRCDVNHYDFGEA---GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRV 136
V G C +C +++ E GC +C+C+ +G++ C G+C
Sbjct: 605 HVEGPTCSKCKPLYWNLAEENPEGCTACQCDVSGTLSGVGECQQETGRCYCKSNVCGDFC 664
Query: 137 HT-ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRCQCKPGVTGDK 194
+T E + +N + G + C+ D GGS++ C G CQC+ V G
Sbjct: 665 NTCEAGYYALENKNYFG-----CKGCQCDV-----GGSISFACAEPSGACQCREHVVGKA 714
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVK 222
C +Y F + E +VK
Sbjct: 715 CQERPEKNYFFPDLHHMKFEIEDGTTVK 742
Score = 158 (60.7 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 55/193 (28%), Positives = 79/193 (40%)
Query: 63 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 122
GS ++ N E C C P GD C C + Y + G S C P N+ C
Sbjct: 1656 GSGSIAYNVE-TCSCPPEYAGDSCQDCGLGFYRESK-GLFSGRCVPCNCNGNSNRCHDGT 1713
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGN-RIWDLRRCKR-DTYPLGHGGSLNLQCNS 180
G+C + Q ++ G EL G+ RI R T + +GG +
Sbjct: 1714 GKCINCQYNTAGE-KCELCKDGYFGDATQGSCRICPCPYTNRFATGCVANGGEI------ 1766
Query: 181 EGRCQCKPGVTGDKCDRCDVNHYDFGE--AG-CKSCECNPAGSVKNTPNCDSVKGQC--- 234
+C CK G TG +C+RC ++ + G C+ C CN G + + CD + G+C
Sbjct: 1767 --QCLCKEGYTGVRCERCAPGYFGNPQKYGGYCQKCNCNNNGQLAS---CDRLTGECFNN 1821
Query: 235 ECKDNVEGAQCRS 247
E KD C S
Sbjct: 1822 EPKDVDPNEDCDS 1834
Score = 156 (60.0 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 50/168 (29%), Positives = 72/168 (42%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE-AGCKSCECNPAGSV 112
C CNC L + G+C C P KC+ C+ ++ + AGC+SC C+ G V
Sbjct: 1320 CKLCNCGQ----RLCDDLTGKCICPPRTVKPKCEVCERYYFSYHPLAGCESCNCSERGVV 1375
Query: 113 KNT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
P C+ GQC+ + RGR + +F P N I +C RD
Sbjct: 1376 NAARPECEKNNGQCK-CKPGIRGR-QCDRCAPGTYDF-P--NCI--PCKCNRD------- 1421
Query: 172 GSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
G+ C+ + G C CK V G +CD C + + GC +C C
Sbjct: 1422 GTEPDVCDPQTGICLCKENVEGAECDICRPGSFYLDPSNPKGCTTCFC 1469
Score = 124 (48.7 bits), Expect = 0.00040, P = 0.00040
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSEGRC-QCKPGVTGD 84
C + G +C+ C +Y++S F C CNCN G+ N + G+C C+ G+
Sbjct: 1669 CPPEYAGDSCQDCGLGFYRESKGLFSGRCVPCNCN--GNSNRCHDGTGKCINCQYNTAGE 1726
Query: 85 KCDRCDVNHY-DFGEAGCKSCEC 106
KC+ C ++ D + C+ C C
Sbjct: 1727 KCELCKDGYFGDATQGSCRICPC 1749
Score = 70 (29.7 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 24 GHCLDCQGDRDGPNCEKCRDN--YYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
G CL C+ + +G C+ CR Y S CT C C + S C S R + K
Sbjct: 1433 GICL-CKENVEGAECDICRPGSFYLDPSNPKGCTTCFCFGVTS---SCRSTNRRRTK 1485
>UNIPROTKB|E2R4J1 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072274 "metanephric glomerular basement
membrane development" evidence=IEA] [GO:0072249 "metanephric
glomerular visceral epithelial cell development" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
[GO:0048677 "axon extension involved in regeneration" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0014044 "Schwann cell
development" evidence=IEA] [GO:0014002 "astrocyte development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005608 "laminin-3
complex" evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:AAEX03012231 ProteinModelPortal:E2R4J1
Ensembl:ENSCAFT00000018765 Uniprot:E2R4J1
Length = 1803
Score = 273 (101.2 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 72/236 (30%), Positives = 105/236 (44%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C+ C+ G C+ C +Y G C AC C+P G+L+ C + G+C C+ G
Sbjct: 801 HGGQCV-CKPAVVGRRCDHCAPGFYG-FGPTGCQACQCSPEGALSGLCEETSGQCPCRTG 858
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CDRC + F C+ C CN G + CD+ G C + + G H E
Sbjct: 859 AFGLRCDRCQRGQWGF--PSCQPCVCN--G---HADECDTHTGACVGCRDHTGGE-HCE- 909
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL--QCNSEG-----RCQCKPGVTGD 193
R + + DP R+ +C+ P G G + C+ +G C C+ G TG
Sbjct: 910 RCIAGFHGDP---RLPYGGQCRPCPCPEGPGSQRHFATSCHRDGYSQQIMCHCRAGYTGL 966
Query: 194 KCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+C+ C H+ + C+ CECN + CD GQC C + EG C
Sbjct: 967 RCEACAPGHFGDPSRPDGQCQPCECNGNIDPMDPDACDPRTGQCLRCLYHTEGPHC 1022
Score = 266 (98.7 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 72/210 (34%), Positives = 97/210 (46%)
Query: 1 CNCNGFSNRCFFDKELYN-RTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC 59
C CNG N D + + RTG CL C +GP+C C+ +Y ++ C C C
Sbjct: 989 CECNG--NIDPMDPDACDPRTGQ---CLRCLYHTEGPHCAHCKPGFYGQAARQSCHRCTC 1043
Query: 60 NPIGSLNLQC------N---SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPA 109
N +G+ QC N S G+C C P V G CDRC N ++ GC+ C C+P+
Sbjct: 1044 NLLGTDPQQCPSIDRCNCDPSSGQCPCLPNVQGPTCDRCAPNFWNLTSGHGCQPCTCHPS 1103
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
+ P C+ GQC + GR +E Q DP R C D P
Sbjct: 1104 RA--RGPTCNEFTGQCH-CRAGFGGRTCSEC--QELHWGDPG----LQCRACDCD--P-- 1150
Query: 170 HGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
HG QC+ S G C C+PGV+G +CD+C
Sbjct: 1151 HGIDTP-QCHRSTGHCSCRPGVSGVRCDQC 1179
Score = 250 (93.1 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 74/266 (27%), Positives = 107/266 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C D H G C+ C+ G +CE+C ++ + C C
Sbjct: 880 CVCNGHADEC--DT-------HTGACVGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPC 930
Query: 58 NC--NPIGSLN---LQCNSEG-----RCQCKPGVTGDKCDRCDVNHY-DFG--EAGCKSC 104
C P GS C+ +G C C+ G TG +C+ C H+ D + C+ C
Sbjct: 931 PCPEGP-GSQRHFATSCHRDGYSQQIMCHCRAGYTGLRCEACAPGHFGDPSRPDGQCQPC 989
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
ECN + CD GQC + G H + F R RC +
Sbjct: 990 ECNGNIDPMDPDACDPRTGQCLRCLYHTEGP-HC---AHCKPGFYGQAAR-QSCHRCTCN 1044
Query: 165 TYPLGHGGSLNL-QCN---SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAG 219
++ +CN S G+C C P V G CDRC N ++ GC+ C C+P+
Sbjct: 1045 LLGTDPQQCPSIDRCNCDPSSGQCPCLPNVQGPTCDRCAPNFWNLTSGHGCQPCTCHPSR 1104
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ P C+ GQC C+ G C
Sbjct: 1105 A--RGPTCNEFTGQCHCRAGFGGRTC 1128
Score = 227 (85.0 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 62/205 (30%), Positives = 92/205 (44%)
Query: 57 CNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C+P GSL+ +CN G +C CKP V G +CD C Y FG GC++C+C+P G++
Sbjct: 786 CQCDPQGSLSSECNPHGGQCVCKPAVVGRRCDHCAPGFYGFGPTGCQACQCSPEGALSGL 845
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
C+ GQC + + G LR D W C+ P G +
Sbjct: 846 --CEETSGQCP-CRTGAFG-----LRC------DRCQRGQWGFPSCQ----PCVCNGHAD 887
Query: 176 LQCNSE-GRCQ-CKPGVTGDKCDRCDVN-HYD----FGEAGCKSCECNPA-GSVKN-TPN 226
+C++ G C C+ G+ C+RC H D +G C+ C C GS ++ +
Sbjct: 888 -ECDTHTGACVGCRDHTGGEHCERCIAGFHGDPRLPYG-GQCRPCPCPEGPGSQRHFATS 945
Query: 227 C--DSVKGQ--CECKDNVEGAQCRS 247
C D Q C C+ G +C +
Sbjct: 946 CHRDGYSQQIMCHCRAGYTGLRCEA 970
Score = 216 (81.1 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 72/263 (27%), Positives = 105/263 (39%)
Query: 1 CNC-NGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNYYQKSG--DNFCTA 56
C C G ++ F + R G+ + C+ G CE C ++ D C
Sbjct: 930 CPCPEGPGSQRHFATSCH-RDGYSQQIMCHCRAGYTGLRCEACAPGHFGDPSRPDGQCQP 988
Query: 57 CNCNP-IGSLNLQ-CNSE-GRC-QCKPGVTGDKCDRCDVNHYDFGEAG---CKSCECNPA 109
C CN I ++ C+ G+C +C G C C Y G+A C C CN
Sbjct: 989 CECNGNIDPMDPDACDPRTGQCLRCLYHTEGPHCAHCKPGFY--GQAARQSCHRCTCNLL 1046
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR---CKRDT- 165
G+ + C S+ +C S G+ VQ D W+L C+ T
Sbjct: 1047 GT--DPQQCPSID-RCNCDP--SSGQCPCLPNVQG-PTCDRCAPNFWNLTSGHGCQPCTC 1100
Query: 166 YPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVK 222
+P G CN G+C C+ G G C C H+ G+ G C++C+C+P G
Sbjct: 1101 HPSRARGPT---CNEFTGQCHCRAGFGGRTCSECQELHW--GDPGLQCRACDCDPHGI-- 1153
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+TP C G C C+ V G +C
Sbjct: 1154 DTPQCHRSTGHCSCRPGVSGVRC 1176
Score = 192 (72.6 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 57/226 (25%), Positives = 101/226 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+G ++ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 350 CECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPSKDLRDPAM 409
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C +C+C+P+GS + +C+ G+C+CK V G +C +C + +
Sbjct: 410 CRSCDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSASDPAG 469
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK-NFDPAGNRIW----DL 158
C + P S C+ + G + V R N G+ W DL
Sbjct: 470 CRRCQCDARGTVPGTTS----CDP----NSGTCFCKRLVTGRGCNHCLPGH--WGLSHDL 519
Query: 159 RRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C+ +G G+L+ QC+ + G+C+C+ + G +C++ ++
Sbjct: 520 LGCRPCDCDVG--GALDPQCSEATGQCRCRQHMVGRRCEQVQPGYF 563
Score = 192 (72.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 62/196 (31%), Positives = 84/196 (42%)
Query: 71 SEGRCQ-CKPGVTGDKCDRCDVNHY-----DFGE-AGCKSCECNPAGSVKN---TPNCDS 120
S G C C+ G C+ C Y D + A C+SC+C+P GS P+ D
Sbjct: 373 SGGVCDGCQHNTAGRHCELCRPFFYRDPSKDLRDPAMCRSCDCDPMGSQDGGRCDPHDDP 432
Query: 121 VKGQCESAQLSSRGRVHTELRVQSRKNF------DPAGNRIWDLRRCK---RDTYPLGHG 171
G S Q + V Q R F DPAG RRC+ R T P
Sbjct: 433 ALGLV-SGQCRCKEHVVGSRCQQCRDGFFGLSASDPAG-----CRRCQCDARGTVP---- 482
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDS 229
G+ + NS G C CK VTG C+ C H+ GC+ C+C+ G++ P C
Sbjct: 483 GTTSCDPNS-GTCFCKRLVTGRGCNHCLPGHWGLSHDLLGCRPCDCDVGGALD--PQCSE 539
Query: 230 VKGQCECKDNVEGAQC 245
GQC C+ ++ G +C
Sbjct: 540 ATGQCRCRQHMVGRRC 555
Score = 37 (18.1 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 206 GEAGCKSCECNPAGSVKNT--PNC 227
G+A C + C AG + P C
Sbjct: 1419 GDAPCATSPCGGAGCLDEDGQPRC 1442
>RGD|2988 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005178 "integrin binding" evidence=ISO]
[GO:0005604 "basement membrane" evidence=IEA;ISO] [GO:0005605 "basal
lamina" evidence=ISO] [GO:0005608 "laminin-3 complex" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0007528 "neuromuscular junction development"
evidence=ISO] [GO:0007601 "visual perception" evidence=ISO]
[GO:0014002 "astrocyte development" evidence=ISO] [GO:0014044
"Schwann cell development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043256 "laminin complex"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO] [GO:0048677 "axon
extension involved in regeneration" evidence=ISO] [GO:0050808
"synapse organization" evidence=ISO] [GO:0060041 "retina development
in camera-type eye" evidence=ISO] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=ISO] [GO:0072274
"metanephric glomerular basement membrane development" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] RGD:2988
GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
CTD:3913 KO:K06243 EMBL:X16563 IPI:IPI00212868 PIR:S03539
RefSeq:NP_037106.1 UniGene:Rn.774 ProteinModelPortal:P15800
PhosphoSite:P15800 PRIDE:P15800 GeneID:25473 KEGG:rno:25473
NextBio:606781 Genevestigator:P15800 Uniprot:P15800
Length = 1801
Score = 273 (101.2 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 76/238 (31%), Positives = 108/238 (45%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG C C+ G C+ C YY G C AC C+P G+L+ C + G+C C+ G
Sbjct: 801 HGGQCR-CKPGVVGRRCDACATGYYG-FGPAGCQACQCSPDGALSALCEGTSGQCLCRTG 858
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CD C + F C+ C CN G CD+ G C + + G H E
Sbjct: 859 AFGLRCDHCQRGQWGF--PNCRPCVCN--G---RADECDAHTGACLGCRDYTGGE-HCE- 909
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL--QCNSEGR-----CQCKPGVTGD 193
R + + DP R+ +C+ P G G + C+ +G C C+ G TG
Sbjct: 910 RCIAGFHGDP---RLPYGGQCRPCPCPEGPGSQRHFATSCHRDGYSQQIVCHCRAGYTGL 966
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNT-PN-CDSVKGQC-ECKDNVEGAQC 245
+C+ C H+ D + G C+ CEC+ G++ T P CD GQC C + EG C
Sbjct: 967 RCEACAPGHFGDPSKPGGRCQLCECS--GNIDPTDPGACDPHTGQCLRCLHHTEGPHC 1022
Score = 254 (94.5 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 64/188 (34%), Positives = 88/188 (46%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG-------SLNL-QCN-SE 72
H G CL C +GP+C C+ ++ ++ C C CN +G S +L C+ S
Sbjct: 1006 HTGQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGTDPQRCPSTDLCHCDPST 1065
Query: 73 GRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
G+C C P V G CDRC N ++F GC+ C C+P+ + P C+ GQC
Sbjct: 1066 GQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQPCACHPSRA--RGPTCNEFTGQCH-CHAG 1122
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR +E Q DP R C D P G QC+ S G C C+PGV
Sbjct: 1123 FGGRTCSEC--QELHWGDPG----LQCRACDCD--PRGIDKP---QCHRSTGHCSCRPGV 1171
Query: 191 TGDKCDRC 198
+G +CD+C
Sbjct: 1172 SGVRCDQC 1179
Score = 249 (92.7 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 80/268 (29%), Positives = 112/268 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C D H G CL C+ G +CE+C ++ + C C
Sbjct: 880 CVCNGRADEC--D-------AHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPC 930
Query: 58 NC--NPIGSLN---LQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P GS C+ +G C C+ G TG +C+ C H+ D + G C+ C
Sbjct: 931 PCPEGP-GSQRHFATSCHRDGYSQQIVCHCRAGYTGLRCEACAPGHFGDPSKPGGRCQLC 989
Query: 105 ECNPAGSVKNT-PN-CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
EC+ G++ T P CD GQC + G H + F R RC
Sbjct: 990 ECS--GNIDPTDPGACDPHTGQCLRCLHHTEGP-HCG---HCKPGFHGQAAR-QSCHRCT 1042
Query: 163 RD---TYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNP 217
+ T P + C+ S G+C C P V G CDRC N ++F GC+ C C+P
Sbjct: 1043 CNLLGTDPQRCPSTDLCHCDPSTGQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQPCACHP 1102
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ + P C+ GQC C G C
Sbjct: 1103 SRA--RGPTCNEFTGQCHCHAGFGGRTC 1128
Score = 212 (79.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 61/225 (27%), Positives = 102/225 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C CNG S+ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 350 CECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPAA 409
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 103
C C+C+P+GS + +C+S G+C+CK V G +C +C + + +
Sbjct: 410 CRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASNPRG 469
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW----DLR 159
C+ S P C+S S G + R+ + D W DL
Sbjct: 470 CQRCQCNSRGTVPGGTP----CDS----SSGTCFCK-RLVTGDGCDRCLPGHWGLSHDLL 520
Query: 160 RCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHY 203
C+ +G G+L+ QC+ + G+C C+P + G +C++ ++
Sbjct: 521 GCRPCDCDVG--GALDPQCDEATGQCPCRPHMIGRRCEQVQPGYF 563
Score = 211 (79.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 70/227 (30%), Positives = 102/227 (44%)
Query: 38 CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHY-- 94
C KC N + S +F A + S N+ S G C C+ G C+ C Y
Sbjct: 347 CRKCECNGHSHSC-HFDMAVY---LASGNV---SGGVCDGCQHNTAGRHCELCRPFFYRD 399
Query: 95 ---DFGE-AGCKSCECNPAGSVKNTPNCDS--------VKGQCESAQLSSRGRVHTELRV 142
D + A C+ C+C+P GS ++ CDS V GQC + V T +
Sbjct: 400 PTKDMRDPAACRPCDCDPMGS-QDGGRCDSHDDPVLGLVSGQCRCKEHV----VGTRCQ- 453
Query: 143 QSRKNF-DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDV 200
Q R F + + +RC+ ++ GG+ C+S G C CK VTGD CDRC
Sbjct: 454 QCRDGFFGLSASNPRGCQRCQCNSRGTVPGGT---PCDSSSGTCFCKRLVTGDGCDRCLP 510
Query: 201 NHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
H+ GC+ C+C+ G++ P CD GQC C+ ++ G +C
Sbjct: 511 GHWGLSHDLLGCRPCDCDVGGALD--PQCDEATGQCPCRPHMIGRRC 555
Score = 210 (79.0 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C C+P GSL+ +CN G +C+CKPGV G +CD C +Y FG AGC++C+C+P G
Sbjct: 781 NGALPCQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDG 840
Query: 111 SVKNTPNCDSVKGQC 125
++ C+ GQC
Sbjct: 841 ALSAL--CEGTSGQC 853
Score = 205 (77.2 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ +CN G +C+CKPGV G +CD C +Y FG AGC++C+C+P G++ C+
Sbjct: 792 GSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDGALSAL--CEGT 849
Query: 231 KGQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 850 SGQCLCRTGAFGLRC 864
Score = 193 (73.0 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 68/263 (25%), Positives = 100/263 (38%)
Query: 1 CNC-NGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNYY---QKSGDNFCT 55
C C G ++ F + R G+ + C+ G CE C ++ K G C
Sbjct: 930 CPCPEGPGSQRHFATSCH-RDGYSQQIVCHCRAGYTGLRCEACAPGHFGDPSKPGGR-CQ 987
Query: 56 ACNCNPIGSLNLQ----CNSE-GRC-QCKPGVTGDKCDRCDVN-HYDFGEAGCKSCECNP 108
C C+ G+++ C+ G+C +C G C C H C C CN
Sbjct: 988 LCECS--GNIDPTDPGACDPHTGQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNL 1045
Query: 109 AGS-VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP 167
G+ + P+ D C+ S G+ VQ + D W+ R P
Sbjct: 1046 LGTDPQRCPSTDLC--HCDP----STGQCPCLPHVQGL-SCDRCAPNFWNFTS-GRGCQP 1097
Query: 168 LG-HGG-SLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVK 222
H + CN G+C C G G C C H+ G+ G C++C+C+P G K
Sbjct: 1098 CACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELHW--GDPGLQCRACDCDPRGIDK 1155
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
P C G C C+ V G +C
Sbjct: 1156 --PQCHRSTGHCSCRPGVSGVRC 1176
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 39/150 (26%), Positives = 63/150 (42%)
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
+C+ EG K ++ + C ++ G C+C+P GS+ + C+ GQC
Sbjct: 751 RCHEEGLMPSKTPLS-EACVPLLISASSLVYNGALPCQCDPQGSLSS--ECNPHGGQCR- 806
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQC 186
+ GR + F PAG + +C D G+L+ C + G+C C
Sbjct: 807 CKPGVVGR-RCDACATGYYGFGPAGCQAC---QCSPD-------GALSALCEGTSGQCLC 855
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
+ G G +CD C + F C+ C CN
Sbjct: 856 RTGAFGLRCDHCQRGQWGF--PNCRPCVCN 883
Score = 40 (19.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 22/86 (25%), Positives = 30/86 (34%)
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPA--GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC 184
S +R R + Q R+NF+ N+ L R T+ L G L C + G
Sbjct: 1362 SNSADTRRRAEVLMGAQ-RENFNRQHLANQ-QALGRLSTHTHTLSLTGVNELVCGAPGDA 1419
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGC 210
C G R + G GC
Sbjct: 1420 PCATSPCGGAGCRDEDGQPRCGGLGC 1445
>UNIPROTKB|F1N805 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
EMBL:AADN02014130 EMBL:AADN02014129 IPI:IPI00818986
ProteinModelPortal:F1N805 Ensembl:ENSGALT00000036243
ArrayExpress:F1N805 Uniprot:F1N805
Length = 560
Score = 245 (91.3 bits), Expect = 9.1e-22, Sum P(2) = 9.1e-22
Identities = 46/132 (34%), Positives = 72/132 (54%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
C C+ ++ C FD ++ +G GG C +C+ + +G C++C+ YY+ G
Sbjct: 277 CRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMSSAEV 336
Query: 54 CTACNCNPIGSLNL------QCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C P+GS N +C+ + G C CKPGV G CDRC + ++ FGE GC+ C+C
Sbjct: 337 CKPCSCQPMGSANATFSRSWRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGENGCRPCDC 396
Query: 107 NPAGSVKNTPNC 118
++T NC
Sbjct: 397 -ARDCDQHTGNC 407
Score = 147 (56.8 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 47/149 (31%), Positives = 69/149 (46%)
Query: 101 CKSCEC-NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTE-LRVQSRKN--FDPAGNRIW 156
CK C C N A S + G+ S + + +TE R Q K + G +
Sbjct: 274 CKKCRCHNHADSCHFDLSVWLASGK-RSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMS 332
Query: 157 DLRRCKR-DTYPLGHGG---SLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
CK P+G S + +C+ + G C CKPGV G CDRC + ++ FGE GC+
Sbjct: 333 SAEVCKPCSCQPMGSANATFSRSWRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGENGCR 392
Query: 212 SCECNPAGSVKNTPNC-DSVKGQCECKDN 239
C+C ++T NC +S + + E K N
Sbjct: 393 PCDC-ARDCDQHTGNCFNSNESEDEWKWN 420
Score = 39 (18.8 bits), Expect = 9.1e-22, Sum P(2) = 9.1e-22
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 183 RCQCKPGVTGDKCDRCDVNH 202
+C CK V G D C + +
Sbjct: 434 KCVCKEKVLGSVNDFCQMKY 453
Score = 38 (18.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 14/45 (31%), Positives = 17/45 (37%)
Query: 1 CNCNGFSNRCFF-DKELYNRTGHGGHCLDCQGDRDGPNCEKCRDN 44
C N C + D+ L + HG C G P C KC N
Sbjct: 25 CGQNSTELYCSYPDQSLLHPASHG--C----GQ---PRCTKCNAN 60
>UNIPROTKB|P55268 [details] [associations]
symbol:LAMB2 "Laminin subunit beta-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0005605 "basal lamina" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11 complex"
evidence=TAS] Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
GO:GO:0007411 GO:GO:0005198 GO:GO:0007528 GO:GO:0007601
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0060041
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0014044
GO:GO:0014002 Orphanet:98915 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005608 GO:GO:0043260
eggNOG:NOG241384 HOGENOM:HOG000007552 InterPro:IPR013015
PROSITE:PS51116 HOVERGEN:HBG052301 EMBL:Z68155 EMBL:Z68156
EMBL:X79683 EMBL:S77512 IPI:IPI00296922 PIR:A55677 PIR:S53869
RefSeq:NP_002283.3 UniGene:Hs.439726 ProteinModelPortal:P55268
SMR:P55268 DIP:DIP-42106N IntAct:P55268 MINT:MINT-1197111
STRING:P55268 PhosphoSite:P55268 DMDM:156630892 PaxDb:P55268
PRIDE:P55268 DNASU:3913 Ensembl:ENST00000305544
Ensembl:ENST00000418109 GeneID:3913 KEGG:hsa:3913 UCSC:uc003cwe.3
CTD:3913 GeneCards:GC03M049133 HGNC:HGNC:6487 HPA:CAB000053
HPA:HPA001895 MIM:150325 MIM:609049 MIM:614199 neXtProt:NX_P55268
Orphanet:2670 PharmGKB:PA164741827 InParanoid:P55268 KO:K06243
OMA:QPYCIVS OrthoDB:EOG4KSPHW PhylomeDB:P55268 ChiTaRS:LAMB2
GenomeRNAi:3913 NextBio:15371 ArrayExpress:P55268 Bgee:P55268
CleanEx:HS_LAMB2 Genevestigator:P55268 GermOnline:ENSG00000172037
GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 Uniprot:P55268
Length = 1798
Score = 260 (96.6 bits), Expect = 9.0e-21, P = 9.0e-21
Identities = 72/236 (30%), Positives = 104/236 (44%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPG 80
HGG CL C+ G C+ C YY G C AC C+ G+L+ C + G+C C+ G
Sbjct: 798 HGGQCL-CKPGVVGRRCDLCAPGYYG-FGPTGCQACQCSHEGALSSLCEKTSGQCLCRTG 855
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G +CDRC + F C+ C CN G + C++ G C + + G H E
Sbjct: 856 AFGLRCDRCQRGQWGF--PSCRPCVCN--G---HADECNTHTGACLGCRDHTGGE-HCE- 906
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL--QCNSEGR-----CQCKPGVTGD 193
R + + DP R+ +C+ P G G + C+ + C C+ G TG
Sbjct: 907 RCIAGFHGDP---RLPYGGQCRPCPCPEGPGSQRHFATSCHQDEYSQQIVCHCRAGYTGL 963
Query: 194 KCDRCDVNHY-DFGEAG--CKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
+C+ C H+ D G C+ CEC+ + CD GQC C + EG C
Sbjct: 964 RCEACAPGHFGDPSRPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHC 1019
Score = 253 (94.1 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 65/225 (28%), Positives = 106/225 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C C+G ++ C FD +Y +G+ GG C CQ + G +CE CR +Y+ +
Sbjct: 347 CECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPAV 406
Query: 54 CTACNCNPIGSLNL-QCNSE---------GRCQCKPGVTGDKCDRCDVNHYDFG---EAG 100
C +C+C+P+GS + +C+S G+C+CK V G +C +C + G
Sbjct: 407 CRSCDCDPMGSQDGGRCDSHDDPALGLVSGQCRCKEHVVGTRCQQCRDGFFGLSISDRLG 466
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQL-SSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
C+ C+CN G+V + CD G C +L + RG L + D G R
Sbjct: 467 CRRCQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRC-LPGHWGLSHDLLG-----CR 520
Query: 160 RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHY 203
C D GG+L+ QC+ G+C C+ + G +C++ ++
Sbjct: 521 PCDCDV-----GGALDPQCDEGTGQCHCRQHMVGRRCEQVQPGYF 560
Score = 249 (92.7 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 64/209 (30%), Positives = 92/209 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C C+G N D + + H G CL C +GP+C C+ ++ ++ C C CN
Sbjct: 986 CECSG--NIDPMDPDACDP--HTGQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTCN 1041
Query: 61 PIGSLNLQCNS---------EGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAG 110
+G+ QC S G+C C P V G CDRC N ++ GC+ C C+P+
Sbjct: 1042 LLGTNPQQCPSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPNFWNLTSGHGCQPCACHPSR 1101
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH 170
+ P C+ GQC + GR +E Q DP C D+
Sbjct: 1102 A--RGPTCNEFTGQCH-CRAGFGGRTCSEC--QELHWGDPG----LQCHACDCDSR---- 1148
Query: 171 GGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
G QC+ G C C+PGV+G +CD+C
Sbjct: 1149 -GIDTPQCHRFTGHCSCRPGVSGVRCDQC 1176
Score = 247 (92.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 74/266 (27%), Positives = 104/266 (39%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTAC 57
C CNG ++ C H G CL C+ G +CE+C ++ + C C
Sbjct: 877 CVCNGHADEC---------NTHTGACLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPC 927
Query: 58 NC--NPIGSLN---LQCNSEGR-----CQCKPGVTGDKCDRCDVNHY-DFGEAG--CKSC 104
C P GS C+ + C C+ G TG +C+ C H+ D G C+ C
Sbjct: 928 PCPEGP-GSQRHFATSCHQDEYSQQIVCHCRAGYTGLRCEACAPGHFGDPSRPGGRCQLC 986
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD 164
EC+ + CD GQC + G H + F R RC +
Sbjct: 987 ECSGNIDPMDPDACDPHTGQCLRCLHHTEGP-HC---AHCKPGFHGQAAR-QSCHRCTCN 1041
Query: 165 ---TYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAG 219
T P C+ S G+C C P V G CDRC N ++ GC+ C C+P+
Sbjct: 1042 LLGTNPQQCPSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPNFWNLTSGHGCQPCACHPSR 1101
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
+ P C+ GQC C+ G C
Sbjct: 1102 A--RGPTCNEFTGQCHCRAGFGGRTC 1125
Score = 207 (77.9 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 68/198 (34%), Positives = 89/198 (44%)
Query: 71 SEGRCQ-CKPGVTGDKCDRCDVNHY-----DFGE-AGCKSCECNPAGSVKNTPNCDS--- 120
S G C C+ G C+ C Y D + A C+SC+C+P GS ++ CDS
Sbjct: 370 SGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPAVCRSCDCDPMGS-QDGGRCDSHDD 428
Query: 121 -----VKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD---LRRCK---RDTYPLG 169
V GQC + V T + Q R F G I D RRC+ R T P
Sbjct: 429 PALGLVSGQCRCKEHV----VGTRCQ-QCRDGF--FGLSISDRLGCRRCQCNARGTVP-- 479
Query: 170 HGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGE--AGCKSCECNPAGSVKNTPNC 227
GS NS G C CK VTG CDRC H+ GC+ C+C+ G++ P C
Sbjct: 480 --GSTPCDPNS-GSCYCKRLVTGRGCDRCLPGHWGLSHDLLGCRPCDCDVGGALD--PQC 534
Query: 228 DSVKGQCECKDNVEGAQC 245
D GQC C+ ++ G +C
Sbjct: 535 DEGTGQCHCRQHMVGRRC 552
Score = 200 (75.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 52 NFCTACNCNPIGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
N C CNP GSL+ +CN G +C CKPGV G +CD C +Y FG GC++C+C+ G
Sbjct: 778 NGALPCQCNPQGSLSSECNPHGGQCLCKPGVVGRRCDLCAPGYYGFGPTGCQACQCSHEG 837
Query: 111 SVKNTPNCDSVKGQC 125
++ + C+ GQC
Sbjct: 838 ALSSL--CEKTSGQC 850
Score = 196 (74.1 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 62/230 (26%), Positives = 87/230 (37%)
Query: 29 CQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNP-IGSLNLQ-CNSE-GRC-QCKPGV 81
C+ G CE C ++ + G C C C+ I ++ C+ G+C +C
Sbjct: 956 CRAGYTGLRCEACAPGHFGDPSRPGGR-CQLCECSGNIDPMDPDACDPHTGQCLRCLHHT 1014
Query: 82 TGDKCDRCDVN-HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G C C H C C CN G+ N C S QC S G+
Sbjct: 1015 EGPHCAHCKPGFHGQAARQSCHRCTCNLLGT--NPQQCPS-PDQCHCDP--SSGQCPCLP 1069
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLG-HGG-SLNLQCNS-EGRCQCKPGVTGDKCDR 197
VQ + D W+L P H + CN G+C C+ G G C
Sbjct: 1070 NVQG-PSCDRCAPNFWNLTS-GHGCQPCACHPSRARGPTCNEFTGQCHCRAGFGGRTCSE 1127
Query: 198 CDVNHYDFGEAG--CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C H+ G+ G C +C+C+ G +TP C G C C+ V G +C
Sbjct: 1128 CQELHW--GDPGLQCHACDCDSRGI--DTPQCHRFTGHCSCRPGVSGVRC 1173
Score = 190 (71.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 172 GSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
GSL+ +CN G +C CKPGV G +CD C +Y FG GC++C+C+ G++ + C+
Sbjct: 789 GSLSSECNPHGGQCLCKPGVVGRRCDLCAPGYYGFGPTGCQACQCSHEGALSSL--CEKT 846
Query: 231 KGQCECKDNVEGAQC 245
GQC C+ G +C
Sbjct: 847 SGQCLCRTGAFGLRC 861
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 44/158 (27%), Positives = 65/158 (41%)
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
QC+ EG K + + C ++ G C+CNP GS+ + C+ GQC
Sbjct: 748 QCHEEGLVPSKTSPS-EACAPLLISLSTLIYNGALPCQCNPQGSLSS--ECNPHGGQC-L 803
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQC 186
+ GR +L F P G + C+ H G+L+ C + G+C C
Sbjct: 804 CKPGVVGR-RCDLCAPGYYGFGPTG-----CQACQ-----CSHEGALSSLCEKTSGQCLC 852
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
+ G G +CDRC + F C+ C CN NT
Sbjct: 853 RTGAFGLRCDRCQRGQWGF--PSCRPCVCNGHADECNT 888
Score = 41 (19.5 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 11/38 (28%), Positives = 13/38 (34%)
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
D+N G G C +P G C GQ C
Sbjct: 1404 DINELVCGAPGDAPCATSPCGGA----GCRDEDGQPRC 1437
>ZFIN|ZDB-GENE-990415-169 [details] [associations]
symbol:ntn1a "netrin 1a" species:7955 "Danio rerio"
[GO:0033564 "anterior/posterior axon guidance" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0016525
"negative regulation of angiogenesis" evidence=IMP] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IGI]
InterPro:IPR001134 PROSITE:PS50189 ZFIN:ZDB-GENE-990415-169
GO:GO:0005576 GO:GO:0016358 GO:GO:0001569 GO:GO:0016525
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0048665
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 HOVERGEN:HBG006464 KO:K06843
HOGENOM:HOG000286017 OMA:NCHTCDA GO:GO:0033564 EMBL:BX255899
EMBL:AF002717 EMBL:CU638812 IPI:IPI00500311 RefSeq:NP_571104.1
UniGene:Dr.545 STRING:O42140 Ensembl:ENSDART00000027806
Ensembl:ENSDART00000148565 GeneID:30227 KEGG:dre:30227 CTD:30227
InParanoid:O42140 NextBio:20806684 Uniprot:O42140
Length = 603
Score = 255 (94.8 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 52/156 (33%), Positives = 80/156 (51%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ S
Sbjct: 340 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRKA 399
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC N Y + C P
Sbjct: 400 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-ANGYQQSRSPIAPCIKIPIAPP 458
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
T + CES +S+G++ ++ +K++
Sbjct: 459 TTTASSTEEPSDCESYCKASKGKLKINMKKYCKKDY 494
Score = 184 (69.8 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 66/229 (28%), Positives = 93/229 (40%)
Query: 31 GDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCD 87
GD + + E RD+Y+ D C CN S ++ + +G C+CK G +CD
Sbjct: 257 GDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVK-DRDGNLVCECKHNTAGPECD 315
Query: 88 RCDVNHYD-------FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSR 133
RC HYD EA C +C CN A + + G+ C + + ++
Sbjct: 316 RCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTA 375
Query: 134 GR-VHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
GR H R P +R + CK D +P+G G CN + G+C CK GV
Sbjct: 376 GRHCHYCKEGYYRDMSKPISHR----KACKACDCHPVGAAGKT---CNQTTGQCPCKDGV 428
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE--CK 237
TG C+RC N Y + C P T + CE CK
Sbjct: 429 TGITCNRC-ANGYQQSRSPIAPCIKIPIAPPTTTASSTEEPSDCESYCK 476
Score = 131 (51.2 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 54/167 (32%), Positives = 72/167 (43%)
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK- 146
RC V D G C+ C+ N AG P CD +C+ + R +R+
Sbjct: 292 RC-VKDRD-GNLVCE-CKHNTAG-----PECD----RCKPFHYDRPWQ-----RATAREA 334
Query: 147 NFDPAGNRIWDLRRCK--RDTYPLG---HGG-SLNLQCNSEGR-CQ-CKPGVTGDKCDRC 198
N A N RRC+ + Y L GG LN + N+ GR C CK G D
Sbjct: 335 NECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSK-- 392
Query: 199 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++H CK+C+C+P G+ T C+ GQC CKD V G C
Sbjct: 393 PISH----RKACKACDCHPVGAAGKT--CNQTTGQCPCKDGVTGITC 433
>ZFIN|ZDB-GENE-040724-213 [details] [associations]
symbol:lama4 "laminin, alpha 4" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IGI] [GO:0030903
"notochord development" evidence=IGI] [GO:0016203 "muscle
attachment" evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-040724-213 GO:GO:0030155
GO:GO:0048514 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0030903 GO:GO:0005606 CTD:3910
HOVERGEN:HBG052299 KO:K06241 EMBL:AY862414 IPI:IPI00862172
RefSeq:NP_001034154.1 UniGene:Dr.87613 ProteinModelPortal:Q2TJF5
STRING:Q2TJF5 GeneID:566796 KEGG:dre:566796 NextBio:20888381
Uniprot:Q2TJF5
Length = 1871
Score = 262 (97.3 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 77/261 (29%), Positives = 112/261 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY---YQKSGDNFCTAC 57
CNC G ++ C +++ G C+DC+ G CE C D + + G C C
Sbjct: 49 CNCKGHADSC---EDIT------GICIDCRDHTLGDFCELCEDRFLPVFLPDGTFMCRPC 99
Query: 58 NCNPIG--SLNL--QCNSEG---RCQCKPGVTGDKCDRCDVNHY----DFGEAGCKSCEC 106
C P+ S N C+ G RC C+ G G C+RC +Y + G + CK C+C
Sbjct: 100 AC-PLSLESNNFAAHCDRRGEFLRCVCQDGYAGHYCERCAPGYYGNPMELGNS-CKKCDC 157
Query: 107 NPAGSVKNTPN-CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
N N C +V G+C L+ G + + F D + C+ +
Sbjct: 158 NGNSDPNLIFNECHNVTGKC----LNCWGDTAGDNCERCAPGFYGDAISAKDCQECQCNK 213
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 224
G+ + S G C CKPGVTG CDRC+ H F GC+ CEC A +++ T
Sbjct: 214 C-----GTASCDDRS-GVCHCKPGVTGQLCDRCEDGHSGFCTCMGCRRCECASA-ALRAT 266
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
C + C+C+ G C
Sbjct: 267 --CHPLTHSCQCRPGAGGRYC 285
Score = 231 (86.4 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 66/227 (29%), Positives = 92/227 (40%)
Query: 18 NRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD--NFCTACNCNPIGSLNL---QC-NS 71
+R G C+ CQ G CE+C YY + N C C+CN NL +C N
Sbjct: 115 DRRGEFLRCV-CQDGYAGHYCERCAPGYYGNPMELGNSCKKCDCNGNSDPNLIFNECHNV 173
Query: 72 EGRC-QCKPGVTGDKCDRCDVNHYD--FGEAGCKSCECNPAGSVKNTPNCDSVKGQCESA 128
G+C C GD C+RC Y C+ C+CN G T +CD G C
Sbjct: 174 TGKCLNCWGDTAGDNCERCAPGFYGDAISAKDCQECQCNKCG----TASCDDRSGVCH-C 228
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCK 187
+ G++ F RRC+ + +L C+ CQC+
Sbjct: 229 KPGVTGQLCDRCE-DGHSGFCTC----MGCRRCECAS------AALRATCHPLTHSCQCR 277
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
PG G C+RC +D+ +GC+ C+C P NCD G+C
Sbjct: 278 PGAGGRYCERCLPGFWDYSPSGCRKCDC-PE------ENCDLHTGEC 317
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 58/219 (26%), Positives = 77/219 (35%)
Query: 41 CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRC-QCKPGVTGDKCDRCDVNHYDF-- 96
C Y+ S C CNC G + C G C C+ GD C+ C+
Sbjct: 34 CARGYFL-SDQETCLPCNCK--GHAD-SCEDITGICIDCRDHTLGDFCELCEDRFLPVFL 89
Query: 97 --GEAGCKSCECNPAGSVKNT--PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA- 151
G C+ C C P N +CD +G+ H R +P
Sbjct: 90 PDGTFMCRPCAC-PLSLESNNFAAHCDR-RGEFLRCVCQDGYAGHYCERCAPGYYGNPME 147
Query: 152 -GNRIWDLRRCKRDTYPLGHGGSLNLQC-NSEGRC-QCKPGVTGDKCDRCDVNHYD--FG 206
GN ++C D + +C N G+C C GD C+RC Y
Sbjct: 148 LGN---SCKKC--DCNGNSDPNLIFNECHNVTGKCLNCWGDTAGDNCERCAPGFYGDAIS 202
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C+ C+CN G T +CD G C CK V G C
Sbjct: 203 AKDCQECQCNKCG----TASCDDRSGVCHCKPGVTGQLC 237
Score = 149 (57.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 38/115 (33%), Positives = 54/115 (46%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPI----GSLNLQCNS-EGRCQCK 78
G C C+ G C++C D + SG FCT C +L C+ CQC+
Sbjct: 224 GVC-HCKPGVTGQLCDRCEDGH---SG--FCTCMGCRRCECASAALRATCHPLTHSCQCR 277
Query: 79 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC--ESAQLS 131
PG G C+RC +D+ +GC+ C+C P NCD G+C E +Q+S
Sbjct: 278 PGAGGRYCERCLPGFWDYSPSGCRKCDC-PE------ENCDLHTGECLPELSQIS 325
>ZFIN|ZDB-GENE-050310-1 [details] [associations]
symbol:ntn4 "netrin 4" species:7955 "Danio rerio"
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-1 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG082019 EMBL:BC163582 IPI:IPI00864479
UniGene:Dr.84045 ProteinModelPortal:B3DJR9 HOGENOM:HOG000168430
Uniprot:B3DJR9
Length = 593
Score = 249 (92.7 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 49/133 (36%), Positives = 71/133 (53%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNF 53
C CNG + C FD+ ++ R+G HGG C DC + G +C+ C+ +Y+ + +
Sbjct: 317 CKCNGHAESCHFDESIWLRSGQQHGGVC-DCLHNTTGQHCQHCQSGFYRDPEKPSTAPDS 375
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
CT C CN +GS C + G C CKPGV G C++C + ++ E GCK C+C AG
Sbjct: 376 CTPCMCNHVGSS--YCKPDNGECVCKPGVAGRHCEQCMLGYWGLDEYGCKPCQC--AG-- 429
Query: 113 KNTPNCDSVKGQC 125
+CD G C
Sbjct: 430 ----DCDPYTGDC 438
Score = 120 (47.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 170 HGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
H GS C + G C CKPGV G C++C + ++ E GCK C+C AG +CD
Sbjct: 383 HVGSS--YCKPDNGECVCKPGVAGRHCEQCMLGYWGLDEYGCKPCQC--AG------DCD 432
Query: 229 SVKGQC 234
G C
Sbjct: 433 PYTGDC 438
Score = 95 (38.5 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 23/70 (32%), Positives = 24/70 (34%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNPAGSVKNTPNCDSVKGQCE 235
G C C TG C C Y E C C CN GS C G+C
Sbjct: 342 GVCDCLHNTTGQHCQHCQSGFYRDPEKPSTAPDSCTPCMCNHVGS----SYCKPDNGECV 397
Query: 236 CKDNVEGAQC 245
CK V G C
Sbjct: 398 CKPGVAGRHC 407
Score = 76 (31.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 30/119 (25%), Positives = 48/119 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL----DCQGDRDGPNCEKCRDNYYQK-------- 48
C C+G +++C +N G H + C+ G +CE+C Y +
Sbjct: 248 CLCHGHADQCVPTGGKHNSKTFGKHVVHGKCSCRHHTAGDHCERCHRLYNDRPWRAADGL 307
Query: 49 SGD-NFCTACNCNPIGSLNLQCNSEGRCQCKPGVT-GDKCDRCDVNHYDFGEAGCKSCE 105
+G+ N C C CN G C+ + + G G CD C H G+ C+ C+
Sbjct: 308 TGEANQCVECKCN--GHAE-SCHFDESIWLRSGQQHGGVCD-C--LHNTTGQH-CQHCQ 359
Score = 70 (29.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 16/45 (35%), Positives = 21/45 (46%)
Query: 73 GRCQCKPGVTGDKCDRCDVNHYD---------FGEAG-CKSCECN 107
G+C C+ GD C+RC + D GEA C C+CN
Sbjct: 276 GKCSCRHHTAGDHCERCHRLYNDRPWRAADGLTGEANQCVECKCN 320
>UNIPROTKB|F1PSP7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:NCHTCDA EMBL:AAEX03003649
EMBL:AAEX03003650 EMBL:AAEX03003651 EMBL:AAEX03003652
EMBL:AAEX03003653 Ensembl:ENSCAFT00000027581 Uniprot:F1PSP7
Length = 603
Score = 245 (91.3 bits), Expect = 6.5e-20, P = 6.5e-20
Identities = 50/156 (32%), Positives = 78/156 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCRKDY 495
Score = 173 (66.0 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 62/223 (27%), Positives = 91/223 (40%)
Query: 31 GDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDR 88
GD + + E RD+Y+ D C CN + ++ + C C+ G +CDR
Sbjct: 258 GDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDR 317
Query: 89 CDVNHYD-------FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSRG 134
C HYD EA C +C CN A + + G+ C + + ++ G
Sbjct: 318 CKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAG 377
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
R H + + G I + CK D +P+G G CN + G+C CK GVTG
Sbjct: 378 R-HCHYCKEGY--YRDMGKPITHRKACKACDCHPVGAAGKT---CNQTTGQCPCKDGVTG 431
Query: 193 DKCDRCDVNHYDFGE--AGCKSCECNP----AGSVKNTPNCDS 229
C+RC + A C P A SV+ +CDS
Sbjct: 432 ITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDS 474
Score = 130 (50.8 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 27/73 (36%), Positives = 35/73 (47%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C +Y D G+ CK+C+C+P G+ T C+ G
Sbjct: 364 SGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGKT--CNQTTG 421
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 422 QCPCKDGVTGITC 434
Score = 99 (39.9 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCN 60
C ACNCN
Sbjct: 338 CVACNCN 344
Score = 67 (28.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
DC+ + GP C++C+ +Y + TA N + N CN R +C+
Sbjct: 305 DCRHNTAGPECDRCKPFHYDRPWQR-ATAREANECVACN--CNLHAR-RCR 351
>UNIPROTKB|F1P486 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02014130
EMBL:AADN02014129 IPI:IPI00581824 Ensembl:ENSGALT00000010226
OMA:NCTATFG ArrayExpress:F1P486 Uniprot:F1P486
Length = 613
Score = 245 (91.3 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 46/132 (34%), Positives = 72/132 (54%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
C C+ ++ C FD ++ +G GG C +C+ + +G C++C+ YY+ G
Sbjct: 310 CRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMSSAEV 369
Query: 54 CTACNCNPIGSLNL------QCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC 106
C C+C P+GS N +C+ + G C CKPGV G CDRC + ++ FGE GC+ C+C
Sbjct: 370 CKPCSCQPMGSANATFSRSWRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGENGCRPCDC 429
Query: 107 NPAGSVKNTPNC 118
++T NC
Sbjct: 430 -ARDCDQHTGNC 440
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 62/234 (26%), Positives = 99/234 (42%)
Query: 6 FSNRCFFDKELYNRTGHGGHCLDCQ-GDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS 64
F++ +D + GH +C+ +R P K + ++ G C C N G
Sbjct: 226 FAHYAIYDLIIRGSCFCNGHAEECELANRTVP--AKAQSRLHKVHGK--CV-CRHNTAGD 280
Query: 65 LNLQCNSEGRCQ-CKPG--VTG--DKCDRCDV-NHYDFGEAGCKSCECNPAGSVKNTPNC 118
+C Q KPG TG ++C +C NH D SC + + + +
Sbjct: 281 HCEKCAPLYNDQPWKPGDGKTGAPNECKKCRCHNHAD-------SCHFDLSVWLASGKRS 333
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGG---SL 174
V C++ + ++ G H R + D G + CK P+G S
Sbjct: 334 GGV---CDNCKHNTEG--HRCQRCKPGYYRD-RGKPMSSAEVCKPCSCQPMGSANATFSR 387
Query: 175 NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
+ +C+ + G C CKPGV G CDRC + ++ FGE GC+ C+C ++T NC
Sbjct: 388 SWRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGENGCRPCDC-ARDCDQHTGNC 440
>UNIPROTKB|G3V6X3 [details] [associations]
symbol:Ntn3 "Netrin 2-like (Chicken)" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
RGD:619811 GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 EMBL:CH473948
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
OMA:TASPLCW GeneTree:ENSGT00700000104042 RefSeq:NP_446184.1
UniGene:Rn.95949 Ensembl:ENSRNOT00000009735 GeneID:114524
KEGG:rno:114524 NextBio:618679 Uniprot:G3V6X3
Length = 580
Score = 242 (90.2 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 55/157 (35%), Positives = 80/157 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSG----DN-F 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC + + C P
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG-FQQSRSPVAPCVKTPVPGP 429
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNF 148
T V+ Q CES +RG L+ RK++
Sbjct: 430 --TEESSPVEPQDCESHCRPARGSYRISLKKFCRKDY 464
Score = 141 (54.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 53/164 (32%), Positives = 73/164 (44%)
Query: 57 CNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYD------FG-EA-GCKSCEC 106
C CN S L ++ G C C+ G G C RC + D G EA C +C C
Sbjct: 255 CKCNGHSSRCLM-DTHGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLACSC 313
Query: 107 NPAGSVKNTP-NCDSVK-------GQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIW 156
N G + N + + G C + + ++ GR H R+ F DP G +
Sbjct: 314 N--GHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGR-HCHY---CREGFYRDP-GRVLS 366
Query: 157 DLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
D R C+ D +P+G G CN + G+C CK GVTG C+RC
Sbjct: 367 DRRACRACDCHPVGAAGKT---CNQTTGQCPCKDGVTGLTCNRC 407
Score = 119 (46.9 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 26/73 (35%), Positives = 33/73 (45%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C Y D G C++C+C+P G+ T C+ G
Sbjct: 334 SGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRACRACDCHPVGAAGKT--CNQTTG 391
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 392 QCPCKDGVTGLTC 404
Score = 113 (44.8 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKS-GD--NF 53
C CNG S+RC D HG DCQ +GP+C +C+ Y +Q++ G +
Sbjct: 255 CKCNGHSSRCLMDT-------HGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHA 307
Query: 54 CTACNCN 60
C AC+CN
Sbjct: 308 CLACSCN 314
>MGI|MGI:1341188 [details] [associations]
symbol:Ntn3 "netrin 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IDA;IPI] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA] [GO:0007409 "axonogenesis"
evidence=TAS] [GO:0007520 "myoblast fusion" evidence=ISA]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:1341188 GO:GO:0005794
GO:GO:0005576 GO:GO:0006355 GO:GO:0005578 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 Reactome:REACT_127416
GO:GO:0007409 PROSITE:PS01186 GO:GO:0007520 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 CTD:4917 KO:K06844
OMA:TASPLCW EMBL:AF152418 EMBL:AK031199 EMBL:AF149094 EMBL:AF128866
IPI:IPI00471207 RefSeq:NP_035077.1 UniGene:Mm.259542
ProteinModelPortal:Q9R1A3 SMR:Q9R1A3 STRING:Q9R1A3
PhosphoSite:Q9R1A3 PRIDE:Q9R1A3 Ensembl:ENSMUST00000024931
GeneID:18209 KEGG:mmu:18209 GeneTree:ENSGT00700000104042
InParanoid:Q9R1A3 NextBio:293594 Bgee:Q9R1A3 Genevestigator:Q9R1A3
GermOnline:ENSMUSG00000036473 Uniprot:Q9R1A3
Length = 580
Score = 242 (90.2 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 55/157 (35%), Positives = 80/157 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSG----DN-F 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC + + C P
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG-FQQSRSPVAPCVKTPVPGP 429
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNF 148
T V+ Q CES +RG L+ RK++
Sbjct: 430 --TEESSPVEPQDCESHCRPARGSYRISLKKFCRKDY 464
Score = 140 (54.3 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 53/164 (32%), Positives = 73/164 (44%)
Query: 57 CNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYD------FG-EA-GCKSCEC 106
C CN S L ++ G C C+ G G C RC + D G EA C +C C
Sbjct: 255 CKCNGHASRCL-LDTHGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLACSC 313
Query: 107 NPAGSVKNTP-NCDSVK-------GQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIW 156
N G + N + + G C + + ++ GR H R+ F DP G +
Sbjct: 314 N--GHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGR-HCHY---CREGFYRDP-GRVLS 366
Query: 157 DLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
D R C+ D +P+G G CN + G+C CK GVTG C+RC
Sbjct: 367 DRRACRACDCHPVGAAGKT---CNQTTGQCPCKDGVTGLTCNRC 407
Score = 119 (46.9 bits), Expect = 9.7e-12, Sum P(2) = 9.7e-12
Identities = 26/73 (35%), Positives = 33/73 (45%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C Y D G C++C+C+P G+ T C+ G
Sbjct: 334 SGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRACRACDCHPVGAAGKT--CNQTTG 391
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 392 QCPCKDGVTGLTC 404
Score = 110 (43.8 bits), Expect = 9.7e-12, Sum P(2) = 9.7e-12
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKS-GD--NF 53
C CNG ++RC D HG DCQ +GP+C +C+ Y +Q++ G +
Sbjct: 255 CKCNGHASRCLLDT-------HGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHA 307
Query: 54 CTACNCN 60
C AC+CN
Sbjct: 308 CLACSCN 314
>UNIPROTKB|O95631 [details] [associations]
symbol:NTN1 "Netrin-1" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0060603 "mammary
gland duct morphogenesis" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0006915 GO:GO:0007411 GO:GO:0001764
GO:GO:0005576 GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0030334 Reactome:REACT_111155 GO:GO:0016337 PROSITE:PS01186
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
KO:K06843 EMBL:U75586 EMBL:GU727649 EMBL:AC090610 EMBL:AC005695
IPI:IPI00006732 RefSeq:NP_004813.2 UniGene:Hs.660885
ProteinModelPortal:O95631 SMR:O95631 DIP:DIP-46273N IntAct:O95631
STRING:O95631 PhosphoSite:O95631 PaxDb:O95631 PRIDE:O95631
Ensembl:ENST00000173229 Ensembl:ENST00000538852
Ensembl:ENST00000546090 GeneID:9423 KEGG:hsa:9423 UCSC:uc002glw.4
CTD:9423 GeneCards:GC17P008865 H-InvDB:HIX0039241 HGNC:HGNC:8029
MIM:601614 neXtProt:NX_O95631 PharmGKB:PA31813 eggNOG:NOG244580
HOGENOM:HOG000286017 InParanoid:O95631 OMA:NCHTCDA
OrthoDB:EOG4H19V9 PhylomeDB:O95631 ChEMBL:CHEMBL1741307
GenomeRNAi:9423 NextBio:35298 ArrayExpress:O95631 Bgee:O95631
CleanEx:HS_NTN1 Genevestigator:O95631 GermOnline:ENSG00000065320
Uniprot:O95631
Length = 604
Score = 242 (90.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 49/156 (31%), Positives = 78/156 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 495
Score = 173 (66.0 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 62/223 (27%), Positives = 91/223 (40%)
Query: 31 GDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDR 88
GD + + E RD+Y+ D C CN + ++ + C C+ G +CDR
Sbjct: 258 GDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDR 317
Query: 89 CDVNHYD-------FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSRG 134
C HYD EA C +C CN A + + G+ C + + ++ G
Sbjct: 318 CKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAG 377
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
R H + + G I + CK D +P+G G CN + G+C CK GVTG
Sbjct: 378 R-HCHYCKEGY--YRDMGKPITHRKACKACDCHPVGAAGKT---CNQTTGQCPCKDGVTG 431
Query: 193 DKCDRCDVNHYDFGE--AGCKSCECNP----AGSVKNTPNCDS 229
C+RC + A C P A SV+ +CDS
Sbjct: 432 ITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDS 474
Score = 130 (50.8 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 27/73 (36%), Positives = 35/73 (47%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C +Y D G+ CK+C+C+P G+ T C+ G
Sbjct: 364 SGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGKT--CNQTTG 421
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 422 QCPCKDGVTGITC 434
Score = 99 (39.9 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCN 60
C ACNCN
Sbjct: 338 CVACNCN 344
Score = 67 (28.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
DC+ + GP C++C+ +Y + TA N + N CN R +C+
Sbjct: 305 DCRHNTAGPECDRCKPFHYDRPWQR-ATAREANECVACN--CNLHAR-RCR 351
>UNIPROTKB|F1MYX9 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0001568 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 CTD:3910 KO:K06241
OMA:QLDDYNA EMBL:DAAA02025880 EMBL:DAAA02025869 EMBL:DAAA02025870
EMBL:DAAA02025871 EMBL:DAAA02025872 EMBL:DAAA02025873
EMBL:DAAA02025874 EMBL:DAAA02025875 EMBL:DAAA02025876
EMBL:DAAA02025877 EMBL:DAAA02025878 EMBL:DAAA02025879
IPI:IPI01003454 RefSeq:NP_001192894.1 UniGene:Bt.33367
ProteinModelPortal:F1MYX9 PRIDE:F1MYX9 Ensembl:ENSBTAT00000011612
GeneID:529670 KEGG:bta:529670 NextBio:20875080 Uniprot:F1MYX9
Length = 1824
Score = 185 (70.2 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 49/148 (33%), Positives = 64/148 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQ---KSGDNFCTAC 57
C+CNG SN C G G C+ CQ + G +CEKC D Y + FC C
Sbjct: 82 CDCNGNSNECL--------DG-SGLCVHCQRNTTGEHCEKCLDGYIGDAIRGPPRFCQPC 132
Query: 58 NCN-P-IGSLNLQC---NSEGRCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNP 108
C P + + C N RC CK G C+RC +Y G CK C+C+
Sbjct: 133 PCPLPHVANFAESCYRKNGAVRCICKENYAGPNCERCAPGYYGNPLLIGST-CKKCDCS- 190
Query: 109 AGSVKNT--PNCDSVKGQCESAQLSSRG 134
S N +CD V GQC + ++ G
Sbjct: 191 GNSDPNLIFEDCDEVTGQCRNCLRNTTG 218
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 43/124 (34%), Positives = 60/124 (48%)
Query: 12 FDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTACNCNPIGSLNL- 67
F + Y + G C+ C+ + GPNCE+C YY G C C+C+ NL
Sbjct: 142 FAESCYRKNG-AVRCI-CKENYAGPNCERCAPGYYGNPLLIGST-CKKCDCSGNSDPNLI 198
Query: 68 --QCNS-EGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG-CKSCE-CNPAGSVKNTPNCDSV 121
C+ G+C+ C TG KC+RC +Y G+A K+C CN G P CDS+
Sbjct: 199 FEDCDEVTGQCRNCLRNTTGFKCERCAPGYY--GDARRAKNCAACNCGGG----P-CDSI 251
Query: 122 KGQC 125
G+C
Sbjct: 252 TGEC 255
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 59/195 (30%), Positives = 75/195 (38%)
Query: 63 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVK 122
G L+ SE R PG +CD + C C+CN G N+ C
Sbjct: 43 GRLDPPETSEPRVA--PGSLPPAPKKCDAGFFFAYSEECLPCDCN--G---NSNECLDGS 95
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDP-AGNRIWDLRR-CKRDTYPLGHGGSLNLQC-- 178
G C Q ++ G H E K D G+ I R C+ PL H + C
Sbjct: 96 GLCVHCQRNTTGE-HCE------KCLDGYIGDAIRGPPRFCQPCPCPLPHVANFAESCYR 148
Query: 179 -NSEGRCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVKNT--PNCDSVK 231
N RC CK G C+RC +Y G CK C+C+ S N +CD V
Sbjct: 149 KNGAVRCICKENYAGPNCERCAPGYYGNPLLIGST-CKKCDCS-GNSDPNLIFEDCDEVT 206
Query: 232 GQCE-CKDNVEGAQC 245
GQC C N G +C
Sbjct: 207 GQCRNCLRNTTGFKC 221
Score = 93 (37.8 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 26/69 (37%), Positives = 36/69 (52%)
Query: 182 GRCQ-CKPGVTGDKCDRCDVNHYDFGEAG-CKSCE-CNPAGSVKNTPNCDSVKGQC--EC 236
G+C+ C TG KC+RC +Y G+A K+C CN G P CDS+ G+C E
Sbjct: 207 GQCRNCLRNTTGFKCERCAPGYY--GDARRAKNCAACNCGGG----P-CDSITGECLEEG 259
Query: 237 KDNVEGAQC 245
++ G C
Sbjct: 260 FESPTGTDC 268
>UNIPROTKB|F1N0C7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0030517 "negative regulation of axon extension" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
GO:GO:0016337 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 CTD:9423 OMA:NCHTCDA
EMBL:DAAA02048825 EMBL:DAAA02048826 EMBL:DAAA02048827
EMBL:DAAA02048828 EMBL:DAAA02048829 EMBL:DAAA02048830
EMBL:DAAA02048831 IPI:IPI00704401 RefSeq:NP_001179495.1
UniGene:Bt.88333 Ensembl:ENSBTAT00000016103 GeneID:522767
KEGG:bta:522767 NextBio:20873588 Uniprot:F1N0C7
Length = 603
Score = 241 (89.9 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 49/156 (31%), Positives = 78/156 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ G
Sbjct: 340 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLGKPITHRKA 399
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 400 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 458
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 459 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 494
Score = 173 (66.0 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 62/223 (27%), Positives = 91/223 (40%)
Query: 31 GDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDR 88
GD + + E RD+Y+ D C CN + ++ + C C+ G +CDR
Sbjct: 257 GDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDR 316
Query: 89 CDVNHYD-------FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSRG 134
C HYD EA C +C CN A + + G+ C + + ++ G
Sbjct: 317 CKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAG 376
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
R H + + G I + CK D +P+G G CN + G+C CK GVTG
Sbjct: 377 R-HCHYCKEGY--YRDLGKPITHRKACKACDCHPVGAAGKT---CNQTTGQCPCKDGVTG 430
Query: 193 DKCDRCDVNHYDFGE--AGCKSCECNP----AGSVKNTPNCDS 229
C+RC + A C P A SV+ +CDS
Sbjct: 431 ITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDS 473
Score = 130 (50.8 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 27/73 (36%), Positives = 35/73 (47%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C +Y D G+ CK+C+C+P G+ T C+ G
Sbjct: 363 SGGVCLNCRHNTAGRHCHYCKEGYYRDLGKPITHRKACKACDCHPVGAAGKT--CNQTTG 420
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 421 QCPCKDGVTGITC 433
Score = 99 (39.9 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 284 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 336
Query: 54 CTACNCN 60
C ACNCN
Sbjct: 337 CVACNCN 343
Score = 67 (28.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
DC+ + GP C++C+ +Y + TA N + N CN R +C+
Sbjct: 304 DCRHNTAGPECDRCKPFHYDRPWQR-ATAREANECVACN--CNLHAR-RCR 350
>MGI|MGI:105088 [details] [associations]
symbol:Ntn1 "netrin 1" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;IMP] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IMP;IDA] [GO:0030517 "negative regulation of
axon extension" evidence=IDA] [GO:0030879 "mammary gland
development" evidence=IGI] [GO:0033564 "anterior/posterior axon
guidance" evidence=IMP] [GO:0040023 "establishment of nucleus
localization" evidence=IDA] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0045773 "positive regulation of axon extension"
evidence=IDA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IGI] [GO:0071944 "cell periphery" evidence=ISO]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:105088 GO:GO:0005737
GO:GO:0006915 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 GO:GO:0042472 GO:GO:0071944 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 EMBL:CH466601 GO:GO:0030517 Reactome:REACT_137402
SMART:SM00643 GO:GO:0060603 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00690000102103
HOVERGEN:HBG006464 KO:K06843 CTD:9423 eggNOG:NOG244580
HOGENOM:HOG000286017 OMA:NCHTCDA OrthoDB:EOG4H19V9 EMBL:U65418
EMBL:AF128865 EMBL:AL669842 EMBL:AL606831 EMBL:AL662894
EMBL:BC141294 EMBL:U23505 IPI:IPI00114257 RefSeq:NP_032770.2
UniGene:Mm.39095 ProteinModelPortal:O09118 SMR:O09118 IntAct:O09118
STRING:O09118 PhosphoSite:O09118 PRIDE:O09118
Ensembl:ENSMUST00000021284 Ensembl:ENSMUST00000108674 GeneID:18208
KEGG:mmu:18208 InParanoid:B1ARR0 NextBio:293590 Bgee:O09118
CleanEx:MM_NTN1 Genevestigator:O09118 GermOnline:ENSMUSG00000020902
Uniprot:O09118
Length = 604
Score = 241 (89.9 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 49/156 (31%), Positives = 78/156 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKMNMKKYCRKDY 495
Score = 176 (67.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 63/223 (28%), Positives = 91/223 (40%)
Query: 31 GDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDR 88
GD + + E RD+YY D C CN + ++ + C C+ G +CDR
Sbjct: 258 GDENEDDSELARDSYYYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDR 317
Query: 89 CDVNHYD-------FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSRG 134
C HYD EA C +C CN A + + G+ C + + ++ G
Sbjct: 318 CKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAG 377
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
R H + + G I + CK D +P+G G CN + G+C CK GVTG
Sbjct: 378 R-HCHYCKEGF--YRDMGKPITHRKACKACDCHPVGAAGKT---CNQTTGQCPCKDGVTG 431
Query: 193 DKCDRCDVNHYDFGE--AGCKSCECNP----AGSVKNTPNCDS 229
C+RC + A C P A SV+ +CDS
Sbjct: 432 ITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDS 474
Score = 127 (49.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 27/73 (36%), Positives = 34/73 (46%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C Y D G+ CK+C+C+P G+ T C+ G
Sbjct: 364 SGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKT--CNQTTG 421
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 422 QCPCKDGVTGITC 434
Score = 99 (39.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCN 60
C ACNCN
Sbjct: 338 CVACNCN 344
Score = 67 (28.6 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
DC+ + GP C++C+ +Y + TA N + N CN R +C+
Sbjct: 305 DCRHNTAGPECDRCKPFHYDRPWQR-ATAREANECVACN--CNLHAR-RCR 351
>RGD|619809 [details] [associations]
symbol:Ntn1 "netrin 1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=ISO] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007411 "axon guidance" evidence=ISO;NAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016337 "cell-cell adhesion" evidence=ISO]
[GO:0030334 "regulation of cell migration" evidence=ISO]
[GO:0030517 "negative regulation of axon extension" evidence=ISO]
[GO:0030879 "mammary gland development" evidence=ISO] [GO:0033564
"anterior/posterior axon guidance" evidence=ISO] [GO:0040023
"establishment of nucleus localization" evidence=ISO] [GO:0042472
"inner ear morphogenesis" evidence=ISO] [GO:0045773 "positive
regulation of axon extension" evidence=ISO] [GO:0060603 "mammary
gland duct morphogenesis" evidence=ISO] InterPro:IPR001134
PROSITE:PS50189 RGD:619809 GO:GO:0005737 GO:GO:0006915
GO:GO:0007411 GO:GO:0001764 GO:GO:0008284 GO:GO:0005578
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 HSSP:P02468 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOVERGEN:HBG006464 CTD:9423 eggNOG:NOG244580 HOGENOM:HOG000286017
OrthoDB:EOG4H19V9 EMBL:AY028417 IPI:IPI00205229 UniGene:Rn.41052
ProteinModelPortal:Q924Z9 IntAct:Q924Z9 STRING:Q924Z9 PRIDE:Q924Z9
UCSC:RGD:619809 InParanoid:Q924Z9 NextBio:618675
ArrayExpress:Q924Z9 Genevestigator:Q924Z9 Uniprot:Q924Z9
Length = 604
Score = 241 (89.9 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 49/156 (31%), Positives = 78/156 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 460 TTAASSMEEPEDCDSYCKASKGKLKMNMKKYCRKDY 495
Score = 173 (66.0 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 62/223 (27%), Positives = 91/223 (40%)
Query: 31 GDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDR 88
GD + + E RD+YY D C CN + ++ + C C+ G +CDR
Sbjct: 258 GDENEDDSELARDSYYYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDR 317
Query: 89 CDVNHYD-------FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSRG 134
C HYD EA C +C CN A + + G+ C + + ++ G
Sbjct: 318 CKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAG 377
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
R H + + G I + CK D +P+G G CN + G+C CK GVTG
Sbjct: 378 R-HCHYCKEGF--YRDMGKPITHRKACKACDCHPVGAAGKT---CNQTTGQCPCKDGVTG 431
Query: 193 DKCDRCDVNHYDFGE--AGCKSCECNP----AGSVKNTPNCDS 229
C+RC + A C P A S++ +CDS
Sbjct: 432 ITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSMEEPEDCDS 474
Score = 127 (49.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 27/73 (36%), Positives = 34/73 (46%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C Y D G+ CK+C+C+P G+ T C+ G
Sbjct: 364 SGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKT--CNQTTG 421
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 422 QCPCKDGVTGITC 434
Score = 99 (39.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCN 60
C ACNCN
Sbjct: 338 CVACNCN 344
Score = 67 (28.6 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
DC+ + GP C++C+ +Y + TA N + N CN R +C+
Sbjct: 305 DCRHNTAGPECDRCKPFHYDRPWQR-ATAREANECVACN--CNLHAR-RCR 351
>UNIPROTKB|F1LPC8 [details] [associations]
symbol:Ntn1 "Netrin-1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0040023 "establishment of nucleus
localization" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 RGD:619809
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0016337
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 OMA:NCHTCDA IPI:IPI00205229
RefSeq:NP_446183.2 Ensembl:ENSRNOT00000005255 GeneID:114523
KEGG:rno:114523 ArrayExpress:F1LPC8 Uniprot:F1LPC8
Length = 604
Score = 241 (89.9 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 49/156 (31%), Positives = 78/156 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ RK++
Sbjct: 460 TTAASSMEEPEDCDSYCKASKGKLKMNMKKYCRKDY 495
Score = 173 (66.0 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 62/223 (27%), Positives = 91/223 (40%)
Query: 31 GDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDR 88
GD + + E RD+YY D C CN + ++ + C C+ G +CDR
Sbjct: 258 GDENEDDSELARDSYYYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDR 317
Query: 89 CDVNHYD-------FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSRG 134
C HYD EA C +C CN A + + G+ C + + ++ G
Sbjct: 318 CKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAG 377
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
R H + + G I + CK D +P+G G CN + G+C CK GVTG
Sbjct: 378 R-HCHYCKEGF--YRDMGKPITHRKACKACDCHPVGAAGKT---CNQTTGQCPCKDGVTG 431
Query: 193 DKCDRCDVNHYDFGE--AGCKSCECNP----AGSVKNTPNCDS 229
C+RC + A C P A S++ +CDS
Sbjct: 432 ITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSMEEPEDCDS 474
Score = 127 (49.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 27/73 (36%), Positives = 34/73 (46%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C Y D G+ CK+C+C+P G+ T C+ G
Sbjct: 364 SGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKT--CNQTTG 421
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 422 QCPCKDGVTGITC 434
Score = 99 (39.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCN 60
C ACNCN
Sbjct: 338 CVACNCN 344
Score = 67 (28.6 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
DC+ + GP C++C+ +Y + TA N + N CN R +C+
Sbjct: 305 DCRHNTAGPECDRCKPFHYDRPWQR-ATAREANECVACN--CNLHAR-RCR 351
>UNIPROTKB|E2R3Q6 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005794 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
CTD:4917 KO:K06844 OMA:TASPLCW GeneTree:ENSGT00700000104042
EMBL:AAEX03004613 RefSeq:XP_537003.3 Ensembl:ENSCAFT00000030773
GeneID:479878 KEGG:cfa:479878 NextBio:20854992 Uniprot:E2R3Q6
Length = 577
Score = 239 (89.2 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 54/157 (34%), Positives = 80/157 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSG----DN-F 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC + + C P
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG-FQQSRSPVAPCVKTPVPGP 429
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNF 148
T V+ Q C+S +RG L+ RK++
Sbjct: 430 --TEESSPVEPQDCDSHCKPARGSYRISLKKFCRKDY 464
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 52/164 (31%), Positives = 73/164 (44%)
Query: 57 CNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYD-------FGEA-GCKSCEC 106
C CN S L +++G C C+ G G C RC + D EA C +C C
Sbjct: 255 CKCNGHASRCL-LDTQGHLICDCQHGTEGPDCGRCKPFYCDRPWQRATAREAHACLACSC 313
Query: 107 NPAGSVKNTP-NCDSVK-------GQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIW 156
N G + N + + G C + + ++ GR H R+ F DP G +
Sbjct: 314 N--GHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGR-HCHY---CREGFYRDP-GRALS 366
Query: 157 DLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
D R C+ D +P+G G CN + G+C CK GVTG C+RC
Sbjct: 367 DRRACRACDCHPVGAAGKT---CNQTTGQCPCKDGVTGLTCNRC 407
Score = 123 (48.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 27/73 (36%), Positives = 34/73 (46%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C Y D G A C++C+C+P G+ T C+ G
Sbjct: 334 SGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKT--CNQTTG 391
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 392 QCPCKDGVTGLTC 404
Score = 104 (41.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSGD---N 52
C CNG ++RC D + GH + DCQ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDTQ--------GHLICDCQHGTEGPDCGRCKPFYCDRPWQRATAREAH 306
Query: 53 FCTACNCN 60
C AC+CN
Sbjct: 307 ACLACSCN 314
>UNIPROTKB|P98160 [details] [associations]
symbol:HSPG2 "Basement membrane-specific heparan sulfate
proteoglycan core protein" species:9606 "Homo sapiens" [GO:0001525
"angiogenesis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070062 "extracellular vesicular exosome" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005796 "Golgi
lumen" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006024 "glycosaminoglycan biosynthetic process" evidence=TAS]
[GO:0006027 "glycosaminoglycan catabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0042157
"lipoprotein metabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=ISS;IDA]
Reactome:REACT_111217 InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005886 Reactome:REACT_116125 GO:GO:0005615 GO:GO:0008104
GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0005975 GO:GO:0070062 InterPro:IPR003598 SMART:SM00408
DrugBank:DB00102 GO:GO:0006629 GO:GO:0030198 GO:GO:0001525
GO:GO:0042157 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0043202
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0005796 GO:GO:0030204 GO:GO:0006024 GO:GO:0006027
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 Pfam:PF12661 EMBL:AL590556
DrugBank:DB00039 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 EMBL:AL590103 EMBL:M85289 EMBL:X62515
EMBL:L22078 EMBL:AL445795 EMBL:S76436 EMBL:M64283 IPI:IPI00024284
PIR:A38096 RefSeq:NP_005520.4 UniGene:Hs.562227 PDB:3SH4 PDB:3SH5
PDBsum:3SH4 PDBsum:3SH5 ProteinModelPortal:P98160 SMR:P98160
IntAct:P98160 MINT:MINT-123304 STRING:P98160 PhosphoSite:P98160
DMDM:218512120 DOSAC-COBS-2DPAGE:P98160 PaxDb:P98160 PRIDE:P98160
Ensembl:ENST00000374695 GeneID:3339 KEGG:hsa:3339 UCSC:uc001bfj.3
CTD:3339 GeneCards:GC01M022148 H-InvDB:HIX0023554
H-InvDB:HIX0023598 HGNC:HGNC:5273 HPA:CAB009820 HPA:CAB020718
HPA:HPA018892 MIM:142461 MIM:224410 MIM:255800 neXtProt:NX_P98160
Orphanet:1865 Orphanet:800 PharmGKB:PA29537 eggNOG:NOG258321
HOGENOM:HOG000049276 HOVERGEN:HBG008174 InParanoid:P98160 KO:K06255
OMA:GVTQQCA OrthoDB:EOG44QT00 ChiTaRS:HSPG2 GenomeRNAi:3339
NextBio:13216 ArrayExpress:P98160 Bgee:P98160 CleanEx:HS_HSPG2
Genevestigator:P98160 GermOnline:ENSG00000142798 Uniprot:P98160
Length = 4391
Score = 184 (69.8 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 60/211 (28%), Positives = 92/211 (43%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVTG 83
C GP+C+ C Y + + C C+C+ G C E G CQ C+ G
Sbjct: 1128 CPPGYRGPSCQDCDTGYTRTPSGLYLGTCERCSCH--GHSEA-CEPETGACQGCQHHTEG 1184
Query: 84 DKCDRCDVNHYDFGEAG----CKSCEC--NPA-GSVKNTPNCDSVKGQ--CESAQLSSRG 134
+C++C +Y + G C+ C C +PA G +T D+ G C++ G
Sbjct: 1185 PRCEQCQPGYYGDAQRGTPQDCQLCPCYGDPAAGQAAHTCFLDT-DGHPTCDACSPGHSG 1243
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY---PLGHG----GSLNLQCNSEGRCQCK 187
R H E R +P+ + C+RD+ P+G GS++ QC++ G+CQCK
Sbjct: 1244 R-HCE-RCAPGYYGNPSQGQ-----PCQRDSQVPGPIGCNCDPQGSVSSQCDAAGQCQCK 1296
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
V G C C +H+ + GC C C
Sbjct: 1297 AQVEGLTCSHCRPHHFHLSASNPDGCLPCFC 1327
Score = 165 (63.1 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 54/191 (28%), Positives = 77/191 (40%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
+C C PG G C CD Y +G C+ C C+ G ++ C+ G C+
Sbjct: 1125 QCSCPPGYRGPSCQDCDTG-YTRTPSGLYLGTCERCSCH--G---HSEACEPETGACQGC 1178
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR--CQ- 185
Q + G E + Q D D + C P + +++G C
Sbjct: 1179 QHHTEGP-RCE-QCQPGYYGDAQRGTPQDCQLCPCYGDPAAGQAAHTCFLDTDGHPTCDA 1236
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAG--CK---------SCECNPAGSVKNTPNCDSVKGQC 234
C PG +G C+RC +Y G C+ C C+P GSV + CD+ GQC
Sbjct: 1237 CSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQGSVSS--QCDAA-GQC 1293
Query: 235 ECKDNVEGAQC 245
+CK VEG C
Sbjct: 1294 QCKAQVEGLTC 1304
Score = 157 (60.3 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 37/113 (32%), Positives = 51/113 (45%)
Query: 7 SNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCT---------A 56
++ CF D + GH C C G +CE+C YY S C
Sbjct: 1221 AHTCFLDTD-----GHPT-CDACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIG 1274
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
CNC+P GS++ QC++ G+CQCK V G C C +H+ + GC C C
Sbjct: 1275 CNCDPQGSVSSQCDAAGQCQCKAQVEGLTCSHCRPHHFHLSASNPDGCLPCFC 1327
Score = 149 (57.5 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 46/151 (30%), Positives = 67/151 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C+C+G S C + E G C CQ +GP CE+C+ YY Q+ C C
Sbjct: 1159 CSCHGHSEAC--EPET-------GACQGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLC 1209
Query: 58 NC--NPI-GSLNLQC--NSEGR--CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
C +P G C +++G C C PG +G C+RC +Y G + C+ +
Sbjct: 1210 PCYGDPAAGQAAHTCFLDTDGHPTCDACSPGHSGRHCERCAPGYYGNPSQG-QPCQRDSQ 1268
Query: 110 GSVKNTPNCD---SVKGQCESA-QLSSRGRV 136
NCD SV QC++A Q + +V
Sbjct: 1269 VPGPIGCNCDPQGSVSSQCDAAGQCQCKAQV 1299
Score = 144 (55.7 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 33/100 (33%), Positives = 48/100 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
CNCNG ++ C D +Y GHCL+CQ + +GP C KC+ ++ K+ C C
Sbjct: 764 CNCNGHASSC--DP-VY------GHCLNCQHNTEGPQCNKCKAGFFGDAMKATATSCRPC 814
Query: 58 NCNPIGSLN-------LQCNSEGRCQ-CKPGVTGDKCDRC 89
C I + L + + C C PG TG +C+ C
Sbjct: 815 PCPYIDASRRFSDTCFLDTDGQATCDACAPGYTGRRCESC 854
Score = 131 (51.2 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 54/226 (23%), Positives = 85/226 (37%)
Query: 13 DKELYNRTGHG-GHCLD---CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSL 65
D + + T HG H ++ C G +CE C ++ + G + C+ CNCN S
Sbjct: 713 DTTVTHATSHGRAHSVEECRCPIGYSGLSCESCDAHFTRVPGGPYLGTCSGCNCNGHAS- 771
Query: 66 NLQCNSE-GRC-QCKPGVTGDKCDRCDVNHYDFGEA------GCKSCECNPAGSVKN-TP 116
C+ G C C+ G +C++C FG+A C+ C C + + +
Sbjct: 772 --SCDPVYGHCLNCQHNTEGPQCNKCKAGF--FGDAMKATATSCRPCPCPYIDASRRFSD 827
Query: 117 NCD-SVKGQ--CESAQLSSRGRVHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
C GQ C++ GR R +S ++ GN I +C+ +
Sbjct: 828 TCFLDTDGQATCDACAPGYTGR-----RCESCAPGYE--GNPIQPGGKCRPVNQEIVRCD 880
Query: 173 SLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
S C+CK V G C+ C + GC C C
Sbjct: 881 ERGSMGTSGEACRCKNNVVGRLCNECADGSFHLSTRNPDGCLKCFC 926
Score = 129 (50.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 38/119 (31%), Positives = 49/119 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGD-NFCTAC 57
C CNG S+ C + TG C CQ + G CE C YY +G C C
Sbjct: 1563 CECNGHSDLC------HPETGA---CSQCQHNAAGEFCELCAPGYYGDATAGTPEDCQPC 1613
Query: 58 NC---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
C NP + C S G RC C+PG TG C++C + G + +C P
Sbjct: 1614 ACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCGPGYV--GNPSVQGGQCLP 1670
Score = 110 (43.8 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 42/153 (27%), Positives = 59/153 (38%)
Query: 75 CQCKPGVTGDKCDRCDVNHYDFGEA---G-CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
C+C PG G C C + G G C+ CECN + C G C Q
Sbjct: 1530 CRCPPGYIGLSCQDCAPGYTRTGSGLYLGHCELCECNGHSDL-----CHPETGACSQCQH 1584
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL-NLQCNSEG----RCQ 185
++ G EL AG D + C PL + ++ + C S G RC
Sbjct: 1585 NAAGEF-CELCAPGYYGDATAGTPE-DCQPC---ACPLTNPENMFSRTCESLGAGGYRCT 1639
Query: 186 -CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 217
C+PG TG C++C + G + +C P
Sbjct: 1640 ACEPGYTGQYCEQCGPGYV--GNPSVQGGQCLP 1670
Score = 97 (39.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 29/111 (26%), Positives = 39/111 (35%)
Query: 6 FSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSL 65
FS+ CF D + G C C G CE C Y G+ C P+
Sbjct: 825 FSDTCFLDTD-----GQAT-CDACAPGYTGRRCESCAPGY---EGNPIQPGGKCRPVNQE 875
Query: 66 NLQCNSEGR-------CQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
++C+ G C+CK V G C+ C + GC C C
Sbjct: 876 IVRCDERGSMGTSGEACRCKNNVVGRLCNECADGSFHLSTRNPDGCLKCFC 926
Score = 78 (32.5 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 36/128 (28%), Positives = 46/128 (35%)
Query: 123 GQCESAQLSSR--GRVHTELRVQSRKN-FDPAGNRIWDLRRCK--RDTYPLGHGGSLNLQ 177
G A LSS G V ELR+Q + F + C RD P +GG +
Sbjct: 3805 GAIPKAGLSSGFIGCVR-ELRIQGEEIVFHDLNLTAHGISHCPTCRDR-PCQNGGQCHDS 3862
Query: 178 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+S C C G TG +C+ H C C P + N P D C C
Sbjct: 3863 ESSSYVCVCPAGFTGSRCEHSQALH-------CHPEACGPDATCVNRP--DGRGYTCRCH 3913
Query: 238 DNVEGAQC 245
G +C
Sbjct: 3914 LGRSGLRC 3921
Score = 67 (28.6 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 25/96 (26%), Positives = 36/96 (37%)
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR----CDVNHYDFGEAGCK 211
+D C+R P HG + E +C C+ G GD C+ C + C+
Sbjct: 4103 YDSSPCERQ--PCQHGATCMPAGEYEFQCLCRDGFKGDLCEHEENPCQLREPCLHGGTCQ 4160
Query: 212 S--CECNPAGSVKNTPNCDSVKGQ--CECKDNVEGA 243
C C P S P C G E ++EG+
Sbjct: 4161 GTRCLCLPGFS---GPRCQQGSGHGIAESDWHLEGS 4193
Score = 45 (20.9 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 19/77 (24%), Positives = 27/77 (35%)
Query: 175 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG---C---KSCECNPAGSVKNTPNCD 228
N+ + G C + V G R D+ + G G C CE P
Sbjct: 4068 NMSAHFRG-CVGEVSVNGK---RLDLTYSFLGSQGIGQCYDSSPCERQPCQHGATCMPAG 4123
Query: 229 SVKGQCECKDNVEGAQC 245
+ QC C+D +G C
Sbjct: 4124 EYEFQCLCRDGFKGDLC 4140
Score = 36 (17.7 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 11/39 (28%), Positives = 14/39 (35%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
P C D ++ C C C I S+ C S R
Sbjct: 500 PQRGPCPDGHFYLEHSAACLPCFCFGITSV---CQSTRR 535
>UNIPROTKB|Q2HXW4 [details] [associations]
symbol:NTN1 "Netrin-1" species:9823 "Sus scrofa"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0006915 GO:GO:0005578 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4H19V9 EMBL:DQ368597
RefSeq:NP_001038013.1 UniGene:Ssc.22870 ProteinModelPortal:Q2HXW4
STRING:Q2HXW4 GeneID:733599 KEGG:ssc:733599 CTD:180961
Uniprot:Q2HXW4
Length = 600
Score = 237 (88.5 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ Y++ G
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKA 400
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P
Sbjct: 401 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGVTCNRC-AKGYQQSRSPIAPCIKIPVAPP 459
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 460 TTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDY 495
Score = 176 (67.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 63/223 (28%), Positives = 91/223 (40%)
Query: 31 GDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDR 88
GD + + E RD+Y+ D C CN + ++ + C C+ G +CDR
Sbjct: 258 GDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDR 317
Query: 89 CDVNHYD-------FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSRG 134
C HYD EA C +C CN A + + G+ C + + ++ G
Sbjct: 318 CKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAG 377
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTG 192
R H + F G I + CK D +P+G G CN + G+C CK GVTG
Sbjct: 378 R-HCHYCKEGY--FRDLGKPITHRKACKACDCHPVGAAGKT---CNQTTGQCPCKDGVTG 431
Query: 193 DKCDRCDVNHYDFGE--AGCKSCECNP----AGSVKNTPNCDS 229
C+RC + A C P A SV+ +CDS
Sbjct: 432 VTCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDS 474
Score = 127 (49.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 26/73 (35%), Positives = 35/73 (47%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C ++ D G+ CK+C+C+P G+ T C+ G
Sbjct: 364 SGGVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKACKACDCHPVGAAGKT--CNQTTG 421
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 422 QCPCKDGVTGVTC 434
Score = 99 (39.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG + RC D++ DC+ + GP C++C+ +Y + N
Sbjct: 285 CKCNGHAARCVRDRD-------DSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANE 337
Query: 54 CTACNCN 60
C ACNCN
Sbjct: 338 CVACNCN 344
Score = 67 (28.6 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
DC+ + GP C++C+ +Y + TA N + N CN R +C+
Sbjct: 305 DCRHNTAGPECDRCKPFHYDRPWQR-ATAREANECVACN--CNLHAR-RCR 351
>UNIPROTKB|Q90922 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071944 "cell
periphery" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005578 PROSITE:PS00022 GO:GO:0071944 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:L34549 IPI:IPI00570611 PIR:A54665
RefSeq:NP_990750.1 UniGene:Gga.794 ProteinModelPortal:Q90922
IntAct:Q90922 STRING:Q90922 GeneID:396389 KEGG:gga:396389
eggNOG:NOG237372 HOVERGEN:HBG006464 KO:K06843 NextBio:20816431
Uniprot:Q90922
Length = 606
Score = 237 (88.5 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ S
Sbjct: 343 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKA 402
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C C+C+P+G+ CN + G+C CK GVTG C+RC Y + C PA
Sbjct: 403 CKECDCHPVGAAGQTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPAAPP 461
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S +S+G++ ++ +K++
Sbjct: 462 PTAASSTEEPADCDSYCKASKGKLKINMKKYCKKDY 497
Score = 172 (65.6 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 64/225 (28%), Positives = 91/225 (40%)
Query: 31 GDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDR 88
GD + + E RD+Y+ D C CN S ++ + C CK G +CDR
Sbjct: 260 GDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVRDRDDNLVCDCKHNTAGPECDR 319
Query: 89 CDVNHYD-------FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSRG 134
C HYD EA C +C CN A + + G+ C + + ++ G
Sbjct: 320 CKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAG 379
Query: 135 RVHTELRVQS--RKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGV 190
R H + R P +R + CK D +P+G G CN + G+C CK GV
Sbjct: 380 R-HCHYCKEGFYRDLSKPISHR----KACKECDCHPVGAAGQT---CNQTTGQCPCKDGV 431
Query: 191 TGDKCDRCDVNHYDFGE--AGCKSCECNP----AGSVKNTPNCDS 229
TG C+RC + A C P A S + +CDS
Sbjct: 432 TGITCNRCAKGYQQSRSPIAPCIKIPAAPPPTAASSTEEPADCDS 476
Score = 128 (50.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 35/95 (36%), Positives = 45/95 (47%)
Query: 159 RRCK--RDTYPLG---HGG-SLNLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGC 210
RRC+ + Y L GG LN + N+ GR C CK G D ++H C
Sbjct: 350 RRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSK--PISH----RKAC 403
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
K C+C+P G+ T C+ GQC CKD V G C
Sbjct: 404 KECDCHPVGAAGQT--CNQTTGQCPCKDGVTGITC 436
Score = 104 (41.7 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG ++RC D++ N C DC+ + GP C++C+ +Y + N
Sbjct: 287 CKCNGHASRCVRDRD-DNLV-----C-DCKHNTAGPECDRCKPFHYDRPWQRATAREANE 339
Query: 54 CTACNCN 60
C ACNCN
Sbjct: 340 CVACNCN 346
Score = 67 (28.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
DC+ + GP C++C+ +Y + TA N + N CN R +C+
Sbjct: 307 DCKHNTAGPECDRCKPFHYDRPWQR-ATAREANECVACN--CNLHAR-RCR 353
>UNIPROTKB|F1NK85 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI00819575 Ensembl:ENSGALT00000039263 Uniprot:F1NK85
Length = 330
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 47/156 (30%), Positives = 77/156 (49%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ +
Sbjct: 70 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKA 129
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC F ++ C
Sbjct: 130 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAKG---FQQSRSPVAPCISESCA 186
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ T S C+S ++G ++ +K++
Sbjct: 187 RTTCTLCSSPADCDSYCKPAKGNYKINMKKYCKKDY 222
Score = 152 (58.6 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 59/207 (28%), Positives = 85/207 (41%)
Query: 45 YYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDRCDVNHYD------- 95
YY G+ C CN S ++ + C CK G +CDRC HYD
Sbjct: 1 YYYSVGELQVGGRCKCNGHASRCVKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRAS 60
Query: 96 FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSRGRVHTELRVQSRKNF 148
EA C +C CN A + + G+ C + + ++ GR H + +
Sbjct: 61 AREANECLACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGR-HCHYCKEGF--Y 117
Query: 149 DPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFG 206
I D + CK D +P+G G CN + G+C CK GVTG C+RC
Sbjct: 118 RDLSKSITDRKACKACDCHPVGAAGKT---CNQTTGQCPCKDGVTGLTCNRCAKGFQQSR 174
Query: 207 E--AGCKSCEC-NPAGSVKNTP-NCDS 229
A C S C ++ ++P +CDS
Sbjct: 175 SPVAPCISESCARTTCTLCSSPADCDS 201
Score = 128 (50.1 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 53/171 (30%), Positives = 71/171 (41%)
Query: 93 HYDFGEAGCKS-CECNPAGS--VKNTPN---CDSVKGQCESAQLSSRGRVHTEL---RVQ 143
+Y GE C+CN S VK+ CD K E + H + R
Sbjct: 2 YYSVGELQVGGRCKCNGHASRCVKDKEQKLVCDC-KHNTEGPECDRCKPFHYDRPWQRAS 60
Query: 144 SRK-NFDPAGNRIWDLRRCK--RDTYPLG---HGG-SLNLQCNSEGR-CQ-CKPGVTGDK 194
+R+ N A N RRC+ + Y L GG LN + N+ GR C CK G D
Sbjct: 61 AREANECLACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRD- 119
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ CK+C+C+P G+ T C+ GQC CKD V G C
Sbjct: 120 -----LSKSITDRKACKACDCHPVGAAGKT--CNQTTGQCPCKDGVTGLTC 163
Score = 110 (43.8 bits), Expect = 0.00085, P = 0.00085
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG ++RC DKE C DC+ + +GP C++C+ +Y + N
Sbjct: 14 CKCNGHASRCVKDKE------QKLVC-DCKHNTEGPECDRCKPFHYDRPWQRASAREANE 66
Query: 54 CTACNCN 60
C ACNCN
Sbjct: 67 CLACNCN 73
>UNIPROTKB|O00634 [details] [associations]
symbol:NTN3 "Netrin-3" species:9606 "Homo sapiens"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0042692 "muscle cell
differentiation" evidence=TAS] [GO:0051149 "positive regulation of
muscle cell differentiation" evidence=TAS] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005794 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0005578 PROSITE:PS00022 GO:GO:0042692 GO:GO:0051149
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
eggNOG:NOG244580 HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 EMBL:U86759
EMBL:U86758 IPI:IPI00006193 RefSeq:NP_006172.1 UniGene:Hs.158336
ProteinModelPortal:O00634 SMR:O00634 STRING:O00634 PaxDb:O00634
PRIDE:O00634 Ensembl:ENST00000293973 GeneID:4917 KEGG:hsa:4917
UCSC:uc002cqj.3 CTD:4917 GeneCards:GC16P002521 HGNC:HGNC:8030
MIM:602349 neXtProt:NX_O00634 PharmGKB:PA164724231
InParanoid:O00634 KO:K06844 OMA:TASPLCW PhylomeDB:O00634
GenomeRNAi:4917 NextBio:18935 Bgee:O00634 CleanEx:HS_NTN3
Genevestigator:O00634 GermOnline:ENSG00000162068 Uniprot:O00634
Length = 580
Score = 236 (88.1 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 53/157 (33%), Positives = 81/157 (51%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSG----DN-F 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC F ++ C
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG---FQQSRSPVAPCVKTPIP 427
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNF 148
T + V+ Q C+S +RG L+ +K++
Sbjct: 428 GPTEDSSPVQPQDCDSHCKPARGSYRISLKKFCKKDY 464
Score = 161 (61.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 44/149 (29%), Positives = 67/149 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSG---DN 52
C CNG ++RC D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESH 306
Query: 53 FCTACNCNPIGS---LNLQC------NSEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-- 99
C AC+CN N++ S G C C+ G C C Y D G A
Sbjct: 307 ACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALS 366
Query: 100 ---GCKSCECNPAGSVKNTPNCDSVKGQC 125
C++C+C+P G+ T C+ GQC
Sbjct: 367 DRRACRACDCHPVGAAGKT--CNQTTGQC 393
Score = 141 (54.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 51/164 (31%), Positives = 73/164 (44%)
Query: 57 CNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYD--FGEA------GCKSCEC 106
C CN S L +++G C C+ G G C RC + D + A C +C C
Sbjct: 255 CKCNGHASRCL-LDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESHACLACSC 313
Query: 107 NPAGSVKNTP-NCDSVK-------GQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIW 156
N G + N + + G C + + ++ GR H R+ F DP G +
Sbjct: 314 N--GHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGR-HCHY---CREGFYRDP-GRALS 366
Query: 157 DLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
D R C+ D +P+G G CN + G+C CK GVTG C+RC
Sbjct: 367 DRRACRACDCHPVGAAGKT---CNQTTGQCPCKDGVTGLTCNRC 407
Score = 123 (48.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 27/73 (36%), Positives = 34/73 (46%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C Y D G A C++C+C+P G+ T C+ G
Sbjct: 334 SGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKT--CNQTTG 391
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 392 QCPCKDGVTGLTC 404
>UNIPROTKB|F1NEW2 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI01017205 Ensembl:ENSGALT00000014992 OMA:THKKACK
Uniprot:F1NEW2
Length = 336
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 46/156 (29%), Positives = 77/156 (49%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ +
Sbjct: 73 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKA 132
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC + + C PA +
Sbjct: 133 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC-AKGFQQSRSPVAPCIKIPAINP 191
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S ++G ++ +K++
Sbjct: 192 TSLVTSTEAPADCDSYCKPAKGNYKINMKKYCKKDY 227
Score = 156 (60.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 62/209 (29%), Positives = 85/209 (40%)
Query: 45 YYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDRCDVNHYD------- 95
YY G+ C CN S ++ + C CK G +CDRC HYD
Sbjct: 4 YYYSVGELQVGGRCKCNGHASRCVKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRAS 63
Query: 96 FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSRGRVHTELRVQSRKNF 148
EA C +C CN A + + G+ C + + ++ GR H + +
Sbjct: 64 AREANECLACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGR-HCHYCKEGF--Y 120
Query: 149 DPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFG 206
I D + CK D +P+G G CN + G+C CK GVTG C+RC
Sbjct: 121 RDLSKSITDRKACKACDCHPVGAAGKT---CNQTTGQCPCKDGVTGLTCNRCAKGFQQSR 177
Query: 207 E--AGC-KSCECNPAGSVKNT--P-NCDS 229
A C K NP V +T P +CDS
Sbjct: 178 SPVAPCIKIPAINPTSLVTSTEAPADCDS 206
Score = 128 (50.1 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 53/171 (30%), Positives = 71/171 (41%)
Query: 93 HYDFGEAGCKS-CECNPAGS--VKNTPN---CDSVKGQCESAQLSSRGRVHTEL---RVQ 143
+Y GE C+CN S VK+ CD K E + H + R
Sbjct: 5 YYSVGELQVGGRCKCNGHASRCVKDKEQKLVCDC-KHNTEGPECDRCKPFHYDRPWQRAS 63
Query: 144 SRK-NFDPAGNRIWDLRRCK--RDTYPLG---HGG-SLNLQCNSEGR-CQ-CKPGVTGDK 194
+R+ N A N RRC+ + Y L GG LN + N+ GR C CK G D
Sbjct: 64 AREANECLACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRD- 122
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ CK+C+C+P G+ T C+ GQC CKD V G C
Sbjct: 123 -----LSKSITDRKACKACDCHPVGAAGKT--CNQTTGQCPCKDGVTGLTC 166
Score = 110 (43.8 bits), Expect = 0.00088, P = 0.00088
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG ++RC DKE C DC+ + +GP C++C+ +Y + N
Sbjct: 17 CKCNGHASRCVKDKE------QKLVC-DCKHNTEGPECDRCKPFHYDRPWQRASAREANE 69
Query: 54 CTACNCN 60
C ACNCN
Sbjct: 70 CLACNCN 76
>UNIPROTKB|F1SUI0 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
GeneTree:ENSGT00700000104042 OMA:RAHPASY EMBL:FP102361
RefSeq:XP_003354720.1 Ensembl:ENSSSCT00000008826 GeneID:100622906
KEGG:ssc:100622906 Uniprot:F1SUI0
Length = 580
Score = 234 (87.4 bits), Expect = 9.3e-19, P = 9.3e-19
Identities = 53/157 (33%), Positives = 80/157 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSG----DN-F 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC + + C P
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG-FQQSRSPVAPCVKTPVPGP 429
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNF 148
T + V+ Q C+ +RG L+ RK++
Sbjct: 430 --TEESNPVEPQDCDLHCKPARGSYRISLKKFCRKDY 464
Score = 143 (55.4 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 52/164 (31%), Positives = 73/164 (44%)
Query: 57 CNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYD-------FGEA-GCKSCEC 106
C CN S L +++G C C+ G G C RC + D EA C +C C
Sbjct: 255 CKCNGHASKCL-LDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRATAREAHACLACSC 313
Query: 107 NPAGSVKNTP-NCDSVK-------GQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIW 156
N G + N + + G C + + ++ GR H R+ F DP G +
Sbjct: 314 N--GHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGR-HCHY---CREGFYRDP-GRALS 366
Query: 157 DLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
D R C+ D +P+G G CN + G+C CK GVTG C+RC
Sbjct: 367 DRRACRACDCHPVGAAGKT---CNQTTGQCPCKDGVTGLTCNRC 407
Score = 123 (48.4 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 27/73 (36%), Positives = 34/73 (46%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C Y D G A C++C+C+P G+ T C+ G
Sbjct: 334 SGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKT--CNQTTG 391
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 392 QCPCKDGVTGLTC 404
Score = 97 (39.2 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-DCQGDRDGPNCEKCRDNY----YQKSGD---N 52
C CNG +++C D + GH + DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASKCLLDTQ--------GHLICDCRHGTEGPDCGRCKPFYCDRPWQRATAREAH 306
Query: 53 FCTACNCN 60
C AC+CN
Sbjct: 307 ACLACSCN 314
>ZFIN|ZDB-GENE-990415-168 [details] [associations]
symbol:ntn1b "netrin 1b" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0016358
"dendrite development" evidence=IGI] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-990415-168 GO:GO:0005576
GO:GO:0016358 GO:GO:2001240 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 HSSP:P02468
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 EMBL:AF017420
IPI:IPI00512636 RefSeq:NP_571073.1 UniGene:Dr.75773
ProteinModelPortal:O42203 STRING:O42203 PRIDE:O42203 GeneID:30192
KEGG:dre:30192 CTD:30192 InParanoid:O42203 NextBio:20806657
ArrayExpress:O42203 Bgee:O42203 Uniprot:O42203
Length = 602
Score = 234 (87.4 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 48/156 (30%), Positives = 80/156 (51%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQK-----SGDNF 53
C+CN + RC F+ ELY +G GG CL+C+ + G +C C++ YY+ S
Sbjct: 340 CHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKAISHRRA 399
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P +
Sbjct: 400 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPIAPCIKIPVAAP 458
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
++ + C+S + +G++ ++ +K+F
Sbjct: 459 TSSYSSPDGPTDCDSHCKAPKGKMKVTMKKYCKKDF 494
Score = 176 (67.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 64/225 (28%), Positives = 92/225 (40%)
Query: 31 GDRDGPNCEKCRDNYYQKSGD-NFCTACNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCD 87
GD + + E RD+Y+ D C CN S ++ + EG C+CK G +CD
Sbjct: 257 GDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASKCVK-DREGNLVCECKHNTAGPECD 315
Query: 88 RCDVNHYD-------FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSR 133
RC HYD EA C +C CN A + + G+ C + + ++
Sbjct: 316 RCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTA 375
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVT 191
GR H + + I R CK D +P+G G CN + G+C CK GVT
Sbjct: 376 GR-HCHYCKEGY--YRDMSKAISHRRACKACDCHPVGAAGKT---CNQTTGQCPCKDGVT 429
Query: 192 GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
G C+RC Y + C P + T + S G +C
Sbjct: 430 GITCNRC-AKGYQQSRSPIAPCIKIPVAAP--TSSYSSPDGPTDC 471
Score = 130 (50.8 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 35/95 (36%), Positives = 46/95 (48%)
Query: 159 RRCK--RDTYPLG---HGG-SLNLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGC 210
RRC+ + Y L GG LN + N+ GR C CK G D ++H C
Sbjct: 347 RRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKA--ISH----RRAC 400
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
K+C+C+P G+ T C+ GQC CKD V G C
Sbjct: 401 KACDCHPVGAAGKT--CNQTTGQCPCKDGVTGITC 433
Score = 100 (40.3 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-------NF 53
C CNG +++C D+E G +C+ + GP C++C+ +Y + N
Sbjct: 284 CKCNGHASKCVKDRE-------GNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANE 336
Query: 54 CTACNCN 60
C AC+CN
Sbjct: 337 CVACHCN 343
Score = 59 (25.8 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
G +C+ + GP C++C+ +Y + TA N + + CN R +C+
Sbjct: 299 GNLVCECKHNTAGPECDRCKPFHYDRPWQR-ATAREANECVACH--CNLHAR-RCR 350
>WB|WBGene00006746 [details] [associations]
symbol:unc-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0008078 "mesodermal cell migration" evidence=IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0030334
"regulation of cell migration" evidence=IGI;IMP] [GO:0035262 "gonad
morphogenesis" evidence=IGI;IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] [GO:0005102
"receptor binding" evidence=ISS] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] Reactome:REACT_86739 InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0030424 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045
GO:GO:0030163 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759
GO:GO:0035262 SMART:SM00643 GO:GO:0033563 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 KO:K06843
eggNOG:NOG244580 HOGENOM:HOG000286017 CTD:180961
GeneTree:ENSGT00700000104042 EMBL:M80241 EMBL:FO080932 PIR:JH0799
RefSeq:NP_509165.1 ProteinModelPortal:P34710 SMR:P34710
DIP:DIP-24693N MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 234 (87.4 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 44/97 (45%), Positives = 57/97 (58%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKC-----RDNYYQKSGDNF 53
CNCN + RC FD EL+ +G+ GG CL+C+ + G NC C RD +
Sbjct: 347 CNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKA 406
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C +C C+P+GSL CN S G+C CKPGVTG C+RC
Sbjct: 407 CKSCGCHPVGSLGKSCNQSSGQCVCKPGVTGTTCNRC 443
Score = 163 (62.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/148 (31%), Positives = 61/148 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG ++RC FDK G + DC+ + G CE C+ +Y + + N
Sbjct: 291 CKCNGHASRCIFDKM-------GRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANS 343
Query: 54 CTACNCNPIGS--------LNLQCN-SEGRC-QCKPGVTGDKCDRC------DVNHYDFG 97
C ACNCN L N S G C C+ G C C D +
Sbjct: 344 CVACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTH 403
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQC 125
CKSC C+P GS+ + C+ GQC
Sbjct: 404 RKACKSCGCHPVGSLGKS--CNQSSGQC 429
Score = 148 (57.2 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 53/180 (29%), Positives = 76/180 (42%)
Query: 39 EKCRDNYYQKSGDNFCTA-CNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYD 95
++ + Y+ G+ C CN S + + GR C CK G +C+ C HYD
Sbjct: 272 DEVKQRYFYSMGELAVGGRCKCNGHASRCI-FDKMGRYTCDCKHNTAGTECEMCKPFHYD 330
Query: 96 --FGEA------GCKSCECNP-AGSVKNTPNCDSVKGQ-----CESAQLSSRGR-VHTEL 140
+G A C +C CN A + + G C + + ++ GR H
Sbjct: 331 RPWGRATANSANSCVACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCK 390
Query: 141 RVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
R P +R + CK +P+G SL CN S G+C CKPGVTG C+RC
Sbjct: 391 PGFVRDTSLPMTHR----KACKSCGCHPVG---SLGKSCNQSSGQCVCKPGVTGTTCNRC 443
Score = 124 (48.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 36/95 (37%), Positives = 47/95 (49%)
Query: 159 RRCKRDT--YPL-GH--GG-SLNLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGC 210
+RC+ D + L G+ GG LN + N+ GR C CKPG D + H C
Sbjct: 354 KRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTS--LPMTH----RKAC 407
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KSC C+P GS+ + C+ GQC CK V G C
Sbjct: 408 KSCGCHPVGSLGKS--CNQSSGQCVCKPGVTGTTC 440
Score = 54 (24.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 30/118 (25%), Positives = 46/118 (38%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACNCNP-IGSLNLQCNSEGR-CQC 77
HG + Q P+ + C D+ + + F A P I S N + C
Sbjct: 20 HGAYF--SQFSMRAPDHDPCHDHTGRPVRCVPEFINAAFGKPVIASDTCGTNRPDKYCTV 77
Query: 78 KPGVTG---DKCDRCDV-NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
K G G ++CD CD NH+ A + + N G++ + S+ Q S LS
Sbjct: 78 KEGPDGIIREQCDTCDARNHFQSHPASLLT-DLNSIGNMTCWVSTPSLSPQNVSLTLS 134
>UNIPROTKB|P34710 [details] [associations]
symbol:unc-6 "Netrin unc-6" species:6239 "Caenorhabditis
elegans" [GO:0005576 "extracellular region" evidence=TAS]
Reactome:REACT_86739 InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005737 GO:GO:0030424 GO:GO:0005102 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045 GO:GO:0030163
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759 GO:GO:0035262
SMART:SM00643 GO:GO:0033563 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 CTD:180961 GeneTree:ENSGT00700000104042
EMBL:M80241 EMBL:FO080932 PIR:JH0799 RefSeq:NP_509165.1
ProteinModelPortal:P34710 SMR:P34710 DIP:DIP-24693N
MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 234 (87.4 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 44/97 (45%), Positives = 57/97 (58%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKC-----RDNYYQKSGDNF 53
CNCN + RC FD EL+ +G+ GG CL+C+ + G NC C RD +
Sbjct: 347 CNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKA 406
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRC 89
C +C C+P+GSL CN S G+C CKPGVTG C+RC
Sbjct: 407 CKSCGCHPVGSLGKSCNQSSGQCVCKPGVTGTTCNRC 443
Score = 163 (62.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/148 (31%), Positives = 61/148 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG ++RC FDK G + DC+ + G CE C+ +Y + + N
Sbjct: 291 CKCNGHASRCIFDKM-------GRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANS 343
Query: 54 CTACNCNPIGS--------LNLQCN-SEGRC-QCKPGVTGDKCDRC------DVNHYDFG 97
C ACNCN L N S G C C+ G C C D +
Sbjct: 344 CVACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTH 403
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQC 125
CKSC C+P GS+ + C+ GQC
Sbjct: 404 RKACKSCGCHPVGSLGKS--CNQSSGQC 429
Score = 148 (57.2 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 53/180 (29%), Positives = 76/180 (42%)
Query: 39 EKCRDNYYQKSGDNFCTA-CNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYD 95
++ + Y+ G+ C CN S + + GR C CK G +C+ C HYD
Sbjct: 272 DEVKQRYFYSMGELAVGGRCKCNGHASRCI-FDKMGRYTCDCKHNTAGTECEMCKPFHYD 330
Query: 96 --FGEA------GCKSCECNP-AGSVKNTPNCDSVKGQ-----CESAQLSSRGR-VHTEL 140
+G A C +C CN A + + G C + + ++ GR H
Sbjct: 331 RPWGRATANSANSCVACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCK 390
Query: 141 RVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
R P +R + CK +P+G SL CN S G+C CKPGVTG C+RC
Sbjct: 391 PGFVRDTSLPMTHR----KACKSCGCHPVG---SLGKSCNQSSGQCVCKPGVTGTTCNRC 443
Score = 124 (48.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 36/95 (37%), Positives = 47/95 (49%)
Query: 159 RRCKRDT--YPL-GH--GG-SLNLQCNSEGR-CQ-CKPGVTGDKCDRCDVNHYDFGEAGC 210
+RC+ D + L G+ GG LN + N+ GR C CKPG D + H C
Sbjct: 354 KRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTS--LPMTH----RKAC 407
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
KSC C+P GS+ + C+ GQC CK V G C
Sbjct: 408 KSCGCHPVGSLGKS--CNQSSGQCVCKPGVTGTTC 440
Score = 54 (24.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 30/118 (25%), Positives = 46/118 (38%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQ--KSGDNFCTACNCNP-IGSLNLQCNSEGR-CQC 77
HG + Q P+ + C D+ + + F A P I S N + C
Sbjct: 20 HGAYF--SQFSMRAPDHDPCHDHTGRPVRCVPEFINAAFGKPVIASDTCGTNRPDKYCTV 77
Query: 78 KPGVTG---DKCDRCDV-NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
K G G ++CD CD NH+ A + + N G++ + S+ Q S LS
Sbjct: 78 KEGPDGIIREQCDTCDARNHFQSHPASLLT-DLNSIGNMTCWVSTPSLSPQNVSLTLS 134
>UNIPROTKB|G3N0E7 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 CTD:4917 KO:K06844 OMA:TASPLCW
GeneTree:ENSGT00700000104042 EMBL:DAAA02057314
RefSeq:NP_001193834.1 UniGene:Bt.111865 Ensembl:ENSBTAT00000063051
GeneID:787961 KEGG:bta:787961 NextBio:20928798 Uniprot:G3N0E7
Length = 580
Score = 231 (86.4 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 53/157 (33%), Positives = 78/157 (49%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSG----DN-F 53
C+CNG + RC F+ ELY +G GG CL+C+ + G +C CR+ +Y+ G D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRA 370
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC + + C P
Sbjct: 371 CRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG-FQQSRSPVAPCVKTPVPGP 429
Query: 113 KNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNF 148
T V Q C+ +RG L+ RK++
Sbjct: 430 --TEESSPVAPQDCDLHCKPARGSYRISLKKFCRKDY 464
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 52/164 (31%), Positives = 72/164 (43%)
Query: 57 CNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYD-------FGEA-GCKSCEC 106
C CN S L + +G C C+ G G C RC + D EA C +C C
Sbjct: 255 CKCNGHASRCL-LDPQGHLTCDCRHGTEGPDCSRCKPFYCDRPWQRATAREAHACLACSC 313
Query: 107 NPAGSVKNTP-NCDSVK-------GQCESAQLSSRGRVHTELRVQSRKNF--DPAGNRIW 156
N G + N + + G C + + ++ GR H R+ F DP G +
Sbjct: 314 N--GHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGR-HCHY---CREGFYRDP-GRALS 366
Query: 157 DLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRC 198
D R C+ D +P+G G CN + G+C CK GVTG C+RC
Sbjct: 367 DRRACRACDCHPVGAAGKT---CNQTTGQCPCKDGVTGLTCNRC 407
Score = 123 (48.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 27/73 (36%), Positives = 34/73 (46%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C Y D G A C++C+C+P G+ T C+ G
Sbjct: 334 SGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKT--CNQTTG 391
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 392 QCPCKDGVTGLTC 404
Score = 101 (40.6 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSGD---NF 53
C CNG ++RC D + GH C DC+ +GP+C +C+ Y +Q++ +
Sbjct: 255 CKCNGHASRCLLDPQ-----GHLT-C-DCRHGTEGPDCSRCKPFYCDRPWQRATAREAHA 307
Query: 54 CTACNCN 60
C AC+CN
Sbjct: 308 CLACSCN 314
>UNIPROTKB|F1NQC4 [details] [associations]
symbol:F1NQC4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
GeneTree:ENSGT00700000104042 EMBL:AADN02026516 IPI:IPI00578210
Ensembl:ENSGALT00000005827 OMA:ALADCEC Uniprot:F1NQC4
Length = 175
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 45/112 (40%), Positives = 59/112 (52%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C G SNRC + L T C+ C+ + G +C+ CR +Y+ S +N C
Sbjct: 2 CECYGHSNRCSYIDFLNVVT-----CVSCKHNTRGQHCQHCRLGFYRNSSAELDDENVCI 56
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 107
CNCN IGSL+ +CN G C+CK G TG KCD C N+Y GC C+
Sbjct: 57 ECNCNQIGSLHDRCNETGYCECKEGATGPKCDDCLPNYY--WRQGCFPNVCD 106
Score = 116 (45.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV-KNTPNCDSV 230
GSL+ +CN G C+CK G TG KCD C N+Y GC C+ + +N C
Sbjct: 64 GSLHDRCNETGYCECKEGATGPKCDDCLPNYY--WRQGCFPNVCDDELLLCQNGGTCYQN 121
Query: 231 KGQCECKDNVEGAQCR 246
+ +C C +G C+
Sbjct: 122 Q-RCICPVGFKGVLCQ 136
>UNIPROTKB|Q90923 [details] [associations]
symbol:NTN3 "Netrin-3" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007520 "myoblast fusion"
evidence=IDA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0006355 GO:GO:0005578 PROSITE:PS00022 GO:GO:0007520
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 EMBL:L34550 IPI:IPI00581364 PIR:B54665
UniGene:Gga.792 ProteinModelPortal:Q90923 STRING:Q90923
InParanoid:Q90923 OrthoDB:EOG4VHK67 Uniprot:Q90923
Length = 581
Score = 226 (84.6 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 46/156 (29%), Positives = 77/156 (49%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG CL+C+ + G +C C++ +Y+ +
Sbjct: 318 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKA 377
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC + + C PA +
Sbjct: 378 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRC-AKGFQQSRSPVAPCIKIPAINP 436
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ C+S ++G ++ +K++
Sbjct: 437 TSLVTSTEAPADCDSYCKPAKGNYKINMKKYCKKDY 472
Score = 156 (60.0 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 62/209 (29%), Positives = 85/209 (40%)
Query: 45 YYQKSGD-NFCTACNCNPIGSLNLQCNSEGR-CQCKPGVTGDKCDRCDVNHYD------- 95
YY G+ C CN S ++ + C CK G +CDRC HYD
Sbjct: 249 YYYSVGELQVGGRCKCNGHASRCVKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRAS 308
Query: 96 FGEAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSRGRVHTELRVQSRKNF 148
EA C +C CN A + + G+ C + + ++ GR H + +
Sbjct: 309 AREANECLACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGR-HCHYCKEGF--Y 365
Query: 149 DPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFG 206
I D + CK D +P+G G CN + G+C CK GVTG C+RC
Sbjct: 366 RDLSKSITDRKACKACDCHPVGAAGKT---CNQTTGQCPCKDGVTGLTCNRCAKGFQQSR 422
Query: 207 E--AGC-KSCECNPAGSVKNT--P-NCDS 229
A C K NP V +T P +CDS
Sbjct: 423 SPVAPCIKIPAINPTSLVTSTEAPADCDS 451
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 53/171 (30%), Positives = 71/171 (41%)
Query: 93 HYDFGEAGCKS-CECNPAGS--VKNTPN---CDSVKGQCESAQLSSRGRVHTEL---RVQ 143
+Y GE C+CN S VK+ CD K E + H + R
Sbjct: 250 YYSVGELQVGGRCKCNGHASRCVKDKEQKLVCDC-KHNTEGPECDRCKPFHYDRPWQRAS 308
Query: 144 SRK-NFDPAGNRIWDLRRCK--RDTYPLG---HGG-SLNLQCNSEGR-CQ-CKPGVTGDK 194
+R+ N A N RRC+ + Y L GG LN + N+ GR C CK G D
Sbjct: 309 AREANECLACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRD- 367
Query: 195 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
++ CK+C+C+P G+ T C+ GQC CKD V G C
Sbjct: 368 -----LSKSITDRKACKACDCHPVGAAGKT--CNQTTGQCPCKDGVTGLTC 411
>UNIPROTKB|E1BWU4 [details] [associations]
symbol:E1BWU4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:YCECFGH EMBL:AADN02033768 EMBL:AADN02033769 EMBL:AADN02033770
EMBL:AADN02033771 EMBL:AADN02033772 IPI:IPI00587584
ProteinModelPortal:E1BWU4 Ensembl:ENSGALT00000002932 Uniprot:E1BWU4
Length = 541
Score = 225 (84.3 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 49/135 (36%), Positives = 71/135 (52%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C G SNRC + EL N C+ C+ + G +CE CR Y++ + +N C
Sbjct: 366 CECFGHSNRCSYI-ELLNTV----ICVSCKHNTRGQHCELCRLGYFRNASAELDDENVCI 420
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCEC-NPAGSVKN 114
C CNP GS++ +CN G C+CK G +G KCD+C + Y + GC+ C N +N
Sbjct: 421 DCYCNPFGSVHDRCNDRGFCECKEGASGPKCDKC-LPGYIWHSLGCQPNVCDNELLHCQN 479
Query: 115 TPNC-DSVKGQCESA 128
C ++V+ QC A
Sbjct: 480 GGTCINNVRCQCPPA 494
Score = 140 (54.3 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 61/219 (27%), Positives = 95/219 (43%)
Query: 50 GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNH----YDFGE-----AG 100
G N C CN + G + N C+C+ TG C +C N+ + G G
Sbjct: 295 GRNRCK-CNLHATGCK--EENKRLLCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKG 351
Query: 101 CKSCECNPA-GSVKN------TPNCDSVKGQ----CESAQLSSRGRVHTEL-RVQSRKNF 148
+ C P+ S+ N + C ++ C S + ++RG+ H EL R+ +N
Sbjct: 352 TANI-CIPSISSIGNCECFGHSNRCSYIELLNTVICVSCKHNTRGQ-HCELCRLGYFRN- 408
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
A + D C D Y GS++ +CN G C+CK G +G KCD+C + Y +
Sbjct: 409 --ASAELDDENVCI-DCY-CNPFGSVHDRCNDRGFCECKEGASGPKCDKC-LPGYIWHSL 463
Query: 209 GCKSCEC-NPAGSVKNTPNC-DSVKGQCECKDNVEGAQC 245
GC+ C N +N C ++V+ C+C G C
Sbjct: 464 GCQPNVCDNELLHCQNGGTCINNVR--CQCPPAYTGILC 500
>ZFIN|ZDB-GENE-050310-2 [details] [associations]
symbol:ntn2 "netrin 2" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-2 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 GeneTree:ENSGT00700000104042
OMA:RAHPASY EMBL:FP102170 EMBL:CU929347 EMBL:AY928518
IPI:IPI00628796 RefSeq:NP_001032492.1 UniGene:Dr.153063
Ensembl:ENSDART00000112318 GeneID:641469 KEGG:dre:641469 CTD:641469
NextBio:20901575 Uniprot:Q32SK9
Length = 600
Score = 225 (84.3 bits), Expect = 9.4e-18, P = 9.4e-18
Identities = 48/158 (30%), Positives = 79/158 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
CNCN + RC F+ ELY +G GG C++C+ + G +C C++ +Y+ G
Sbjct: 335 CNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFYRDMGKAITHRRA 394
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC+C+P+G+ CN + G+C CK GVTG C+RC Y + C P +
Sbjct: 395 CKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC-AKGYQQSRSPVAPCIKIPV--I 451
Query: 113 KNTPNCDSVK--GQCESAQLSSRGRVHTELRVQSRKNF 148
K T + + C+S +G + ++ +K++
Sbjct: 452 KPTAVISTTEEPADCDSYCKPLKGNLKINMKKYCKKDY 489
Score = 163 (62.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 64/210 (30%), Positives = 87/210 (41%)
Query: 45 YYQKSGD-NFCTACNCNPIGSLNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYD------ 95
YY GD C CN S ++ +G+ C+CK G +CDRC HYD
Sbjct: 266 YYYAVGDFQVGGRCKCNGHASRCVR-EKDGKLLCECKHNTEGPECDRCKPFHYDRPWQRA 324
Query: 96 FG-EAG-CKSCECN-PAGSVKNTPNCDSVKGQ-----CESAQLSSRGRVHTELRVQSRKN 147
G EA C C CN A + + G+ C + + ++ GR H +
Sbjct: 325 TGKEANECLPCNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGR-HCHYCKEGF-- 381
Query: 148 FDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 205
+ G I R CK D +P+G G CN + G+C CK GVTG C+RC +
Sbjct: 382 YRDMGKAITHRRACKACDCHPVGAAGKT---CNQTTGQCPCKDGVTGITCNRCAKGYQQS 438
Query: 206 GE--AGC-KSCECNPAGSVKNT--P-NCDS 229
A C K P + T P +CDS
Sbjct: 439 RSPVAPCIKIPVIKPTAVISTTEEPADCDS 468
Score = 132 (51.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 28/73 (38%), Positives = 35/73 (47%)
Query: 180 SEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ G C C Y D G+A CK+C+C+P G+ T C+ G
Sbjct: 358 SGGVCMNCRHNTAGRHCHYCKEGFYRDMGKAITHRRACKACDCHPVGAAGKT--CNQTTG 415
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 416 QCPCKDGVTGITC 428
>UNIPROTKB|E9PTR0 [details] [associations]
symbol:E9PTR0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005606
IPI:IPI00568879 Ensembl:ENSRNOT00000052028 ArrayExpress:E9PTR0
Uniprot:E9PTR0
Length = 1622
Score = 230 (86.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 49/136 (36%), Positives = 66/136 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC + G G C++CQ + G +CE+C++ YY + C C C
Sbjct: 64 CNCNGHSNRC--------QDG-SGVCINCQHNTAGEHCERCQEGYYGSAIHGSCRVCPCP 114
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVK 113
S C +G RC CKPG TG +C+RC ++ FG C+ C CN G
Sbjct: 115 HTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQFG 173
Query: 114 NTPNCDSVKGQCESAQ 129
CD + G C S +
Sbjct: 174 T---CDPLTGDCVSQE 186
Score = 144 (55.7 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 50/166 (30%), Positives = 69/166 (41%)
Query: 90 DVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD 149
D+ + G C C CN G ++ C G C + Q ++ G H E R Q + +
Sbjct: 52 DIKSFPAGR--CVPCNCN--G---HSNRCQDGSGVCINCQHNTAGE-HCE-RCQ--EGY- 99
Query: 150 PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD-- 204
G+ I C+ P H S C +G RC CKPG TG +C+RC ++
Sbjct: 100 -YGSAIHG--SCR--VCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNP 154
Query: 205 --FGEAGCKSCECNPAGSVKNTPNCDSVKGQC---ECKDNVEGAQC 245
FG C+ C CN G CD + G C E KD +C
Sbjct: 155 QKFG-GSCQPCNCNSNGQFGT---CDPLTGDCVSQEPKDGSPAEEC 196
>FB|FBgn0015774 [details] [associations]
symbol:NetB "Netrin-B" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0016200
"synaptic target attraction" evidence=TAS] [GO:0007411 "axon
guidance" evidence=IGI;ISS;NAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISS] [GO:0070983 "dendrite guidance"
evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0008039 "synaptic target recognition"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 GO:GO:0007432 SMART:SM00643
GO:GO:0016200 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG244580 GeneTree:ENSGT00700000104042
GO:GO:2000289 EMBL:U60317 EMBL:U63737 RefSeq:NP_001162753.1
RefSeq:NP_001162754.1 RefSeq:NP_001162755.1 RefSeq:NP_001245668.1
RefSeq:NP_001245669.1 RefSeq:NP_511155.1 UniGene:Dm.3913
ProteinModelPortal:Q24568 SMR:Q24568 MINT:MINT-1334555
STRING:Q24568 PRIDE:Q24568 EnsemblMetazoa:FBtr0073940
EnsemblMetazoa:FBtr0302016 EnsemblMetazoa:FBtr0302017
EnsemblMetazoa:FBtr0302018 EnsemblMetazoa:FBtr0304874
EnsemblMetazoa:FBtr0304875 GeneID:32400 KEGG:dme:Dmel_CG10521
CTD:32400 FlyBase:FBgn0015774 InParanoid:Q24568 OMA:NECKMCQ
OrthoDB:EOG43R22P PhylomeDB:Q24568 GenomeRNAi:32400 NextBio:778273
Bgee:Q24568 GermOnline:CG10521 Uniprot:Q24568
Length = 793
Score = 225 (84.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 42/97 (43%), Positives = 54/97 (55%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
C CNG + RC F+ ELY +G GG C +CQ D G C CR+ YY+ +
Sbjct: 498 CQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKV 557
Query: 54 CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRC 89
C C+C+P+GS CN G+C CK GVTG C+RC
Sbjct: 558 CKRCDCHPVGSTGKTCNHLSGQCPCKEGVTGLTCNRC 594
Score = 144 (55.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 55/195 (28%), Positives = 75/195 (38%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIG-SLNLQCNSEGRCQCKPGVT 82
GH +C + D + D N G S + C CK
Sbjct: 409 GHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANHFGRSTQMSAKLTMTCACKHNTA 468
Query: 83 GDKCDRCDVNHYD--FGEAG------CKSCECNPAGSVKNTP-NCDSVK-------GQCE 126
G +C+RC ++D +G A CK C+CN G + N + K G C
Sbjct: 469 GPECERCKPFYFDRPWGRATDNDANECKMCQCN--GHARRCRFNLELYKLSGRVSGGVCY 526
Query: 127 SAQLSSRGRV-HTELRVQSRKNFDPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCNS-EGR 183
+ Q + GR H R P +R + CKR D +P+G G CN G+
Sbjct: 527 NCQHDTTGRYCHYCREGYYRDATKPPNHR----KVCKRCDCHPVGSTGKT---CNHLSGQ 579
Query: 184 CQCKPGVTGDKCDRC 198
C CK GVTG C+RC
Sbjct: 580 CPCKEGVTGLTCNRC 594
Score = 117 (46.2 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 27/73 (36%), Positives = 35/73 (47%)
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHY-DFGEAG-----CKSCECNPAGSVKNTPNCDSVKG 232
S G C C+ TG C C +Y D + CK C+C+P GS T C+ + G
Sbjct: 521 SGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTGKT--CNHLSG 578
Query: 233 QCECKDNVEGAQC 245
QC CK+ V G C
Sbjct: 579 QCPCKEGVTGLTC 591
Score = 48 (22.0 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 19 RTGHGGHCLDCQGDRDGP 36
R G+ G C C+ R GP
Sbjct: 75 RDGNAGECRSCEQQRYGP 92
>MGI|MGI:1934028 [details] [associations]
symbol:Ntng1 "netrin G1" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 MGI:MGI:1934028 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:22854 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 EMBL:AB038662 EMBL:AB038663
EMBL:AB038664 EMBL:AB038665 EMBL:AB038666 EMBL:AB038667
EMBL:AF475069 EMBL:AF475070 EMBL:AF475071 EMBL:AF475072
EMBL:AF475073 EMBL:AF475074 EMBL:AF475075 EMBL:AF475076
EMBL:AF475077 EMBL:AF475078 EMBL:AK034465 EMBL:AK173075
EMBL:BC079881 IPI:IPI00323012 IPI:IPI00323015 IPI:IPI00323016
IPI:IPI00323017 IPI:IPI00354768 IPI:IPI00354771 IPI:IPI00354773
IPI:IPI00465860 IPI:IPI00469999 IPI:IPI00742371
RefSeq:NP_001156820.1 RefSeq:NP_001156821.1 RefSeq:NP_001156822.1
RefSeq:NP_001156823.1 RefSeq:NP_109624.1 RefSeq:NP_597995.1
UniGene:Mm.39262 ProteinModelPortal:Q8R4G0 SMR:Q8R4G0 STRING:Q8R4G0
PRIDE:Q8R4G0 Ensembl:ENSMUST00000072596 GeneID:80883 KEGG:mmu:80883
UCSC:uc008rai.2 UCSC:uc008raj.2 UCSC:uc008rak.2 UCSC:uc008ral.2
UCSC:uc008ram.2 UCSC:uc008rao.2 UCSC:uc008rap.1 UCSC:uc008raq.1
UCSC:uc008rar.2 InParanoid:Q8R4G0 NextBio:350195 Bgee:Q8R4G0
CleanEx:MM_NTNG1 Genevestigator:Q8R4G0
GermOnline:ENSMUSG00000059857 Uniprot:Q8R4G0
Length = 539
Score = 220 (82.5 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 51/153 (33%), Positives = 74/153 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C G SNRC + +L N C+ C+ + G +CE CR Y++ + +N C
Sbjct: 364 CECFGHSNRCSYI-DLLNTV----ICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCI 418
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC-DVNHYDFG--EAGCKS--CECNPAG 110
C CNP+GS++ +CN G C+CK G TG KCD C N + +G C + C G
Sbjct: 419 ECYCNPLGSIHDRCNGSGFCECKTGTTGPKCDECLPGNSWYYGCQPNVCDNELLHCQNGG 478
Query: 111 SVKNTPNC---DSVKG-QCESAQLSSRGRVHTE 139
+ +N C D+ G CE + G +E
Sbjct: 479 TCQNNVRCACPDAYTGILCEKLRCEEAGSCGSE 511
Score = 154 (59.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 63/212 (29%), Positives = 89/212 (41%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT- 115
C CN + L NS+ C+C+ TG C +C N Y S P G+ NT
Sbjct: 297 CKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCKKN-YQGRPWSPGSYLPIPKGTA-NTC 354
Query: 116 -PNCDSVKGQCESAQLSSR----GRVHTELRVQSRKN-------------FDPAGNRIWD 157
P+ S+ G CE S+R ++T + V + N F A ++ D
Sbjct: 355 IPSISSI-GNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDD 413
Query: 158 LRRCKRDTY--PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC-DVNHYDFGEAGCKSCE 214
C + Y PLG S++ +CN G C+CK G TG KCD C N + +G C+
Sbjct: 414 ENVCI-ECYCNPLG---SIHDRCNGSGFCECKTGTTGPKCDECLPGNSWYYG---CQPNV 466
Query: 215 C-NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C N +N C + +C C D G C
Sbjct: 467 CDNELLHCQNGGTCQN-NVRCACPDAYTGILC 497
>RGD|628776 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10116 "Rattus norvegicus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005608 "laminin-3 complex"
evidence=IDA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005913 "cell-cell adherens junction" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0030056 "hemidesmosome"
evidence=IDA] [GO:0031581 "hemidesmosome assembly" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
RGD:628776 GO:GO:0030155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005913 GO:GO:0030334
GO:GO:0016337 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0030056 Pfam:PF02210
GO:GO:0031581 GO:GO:0045995 eggNOG:NOG292643 GO:GO:0005606
GO:GO:0005608 HOGENOM:HOG000048708 HOVERGEN:HBG100777 EMBL:U61261
IPI:IPI00189741 UniGene:Rn.10597 HSSP:P35070
ProteinModelPortal:P70570 STRING:P70570 PRIDE:P70570
UCSC:RGD:628776 NextBio:657622 Genevestigator:P70570 Uniprot:P70570
Length = 1725
Score = 227 (85.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 49/136 (36%), Positives = 65/136 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SNRC + G G C++CQ + G +CE+C+ YY + C C C
Sbjct: 78 CNCNGHSNRC--------QDG-SGVCINCQHNTAGEHCERCKRGYYGSAIHGSCRVCPCP 128
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVK 113
S C +G RC CKPG TG +C+RC ++ FG C+ C CN G
Sbjct: 129 HTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQKFG-GSCQPCNCNSNGQFG 187
Query: 114 NTPNCDSVKGQCESAQ 129
CD + G C S +
Sbjct: 188 T---CDPLTGDCVSQE 200
Score = 138 (53.6 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 47/157 (29%), Positives = 67/157 (42%)
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDL 158
AG +S CN G ++ C G C + Q ++ G H E + ++ + G+ I
Sbjct: 72 AG-RSVPCNCNG---HSNRCQDGSGVCINCQHNTAGE-HCE---RCKRGY--YGSAIHG- 120
Query: 159 RRCKRDTYPLGHGGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCK 211
C+ P H S C +G RC CKPG TG +C+RC ++ FG C+
Sbjct: 121 -SCR--VCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQKFG-GSCQ 176
Query: 212 SCECNPAGSVKNTPNCDSVKGQC---ECKDNVEGAQC 245
C CN G CD + G C E KD +C
Sbjct: 177 PCNCNSNGQFGT---CDPLTGDCVSQEPKDGSPAEEC 210
>UNIPROTKB|E2RRE4 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:AAEX03000816 Ensembl:ENSCAFT00000006331 Uniprot:E2RRE4
Length = 489
Score = 218 (81.8 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 51/158 (32%), Positives = 76/158 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN + RC F+ EL+ +G GG C C+ G +C C+ +++ G
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPGQPITSRKA 271
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C AC C+PIG+ CN + G+C CK GVTG C+RC Y + C+ P +
Sbjct: 272 CRACQCHPIGATGGICNQTSGQCSCKLGVTGLTCNRCGPG-YQQSRSPWMPCQRIPEATT 330
Query: 113 K--NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
TP S QC++ S RVH LR ++++
Sbjct: 331 PLVTTPGAYSSDPQCQNYCNVSDTRVHMSLRRYCQQDY 368
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/184 (28%), Positives = 74/184 (40%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFG--------EAGCKSCECNP-AGSVKNTPNCDSVKGQ 124
RC+C+ TG C+ C +H D+ C C CN A + + G
Sbjct: 174 RCRCRHHTTGLGCESCRPSHRDWPWRPATPWHPHPCLPCSCNQHARRCRFNSELFRLSGG 233
Query: 125 CESAQLSSRGRVHTELRV--QSRKNF--DPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN 179
S + R R HT R + F DP G I + C+ +P+G G + CN
Sbjct: 234 -RSGGVCERCRHHTAGRHCHYCQPGFWRDP-GQPITSRKACRACQCHPIGATGGI---CN 288
Query: 180 -SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK--NTPNCDSVKGQCEC 236
+ G+C CK GVTG C+RC Y + C+ P + TP S QC+
Sbjct: 289 QTSGQCSCKLGVTGLTCNRCGPG-YQQSRSPWMPCQRIPEATTPLVTTPGAYSSDPQCQN 347
Query: 237 KDNV 240
NV
Sbjct: 348 YCNV 351
Score = 102 (41.0 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 23/73 (31%), Positives = 33/73 (45%)
Query: 180 SEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G C+ C+ G C C + D G+ C++C+C+P G+ C+ G
Sbjct: 235 SGGVCERCRHHTAGRHCHYCQPGFWRDPGQPITSRKACRACQCHPIGATGGI--CNQTSG 292
Query: 233 QCECKDNVEGAQC 245
QC CK V G C
Sbjct: 293 QCSCKLGVTGLTC 305
Score = 52 (23.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 73 GRCQCKPGVTGDKC------DRCDVNHYDFGEAGCKSC 104
GRCQC +C RC H+ G GC+SC
Sbjct: 155 GRCQCHGHAA--RCAARARPPRCRCRHHTTG-LGCESC 189
>UNIPROTKB|F1LWK9 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
IPI:IPI00948119 Ensembl:ENSRNOT00000066218 ArrayExpress:F1LWK9
Uniprot:F1LWK9
Length = 457
Score = 216 (81.1 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 50/148 (33%), Positives = 71/148 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C G SNRC + +L N C+ C+ + G +CE CR Y++ + +N C
Sbjct: 282 CECFGHSNRCSYI-DLLNTV----ICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCI 336
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC-DVNHYDFG--EAGCKS--CECNPAG 110
C CNP+GS++ +CN G C+CK G TG KCD C N + +G C + C G
Sbjct: 337 ECYCNPLGSIHDRCNGSGFCECKTGTTGPKCDECLPGNSWYYGCQPNVCDNELLHCQNGG 396
Query: 111 SVKNTPNC---DSVKG-QCESAQLSSRG 134
+ N C D+ G CE + G
Sbjct: 397 TCHNNVRCVCPDAYTGILCEKLRCEEAG 424
Score = 153 (58.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 62/212 (29%), Positives = 90/212 (42%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT- 115
C CN ++ + NS+ C+C+ TG C +C N Y S P G+ NT
Sbjct: 215 CKCNLHATMCVYDNSKLTCECEHNTTGPDCGKCKKN-YQGRPWSPGSYLPIPKGTA-NTC 272
Query: 116 -PNCDSVKGQCESAQLSSR----GRVHTELRVQSRKN-------------FDPAGNRIWD 157
P+ S+ G CE S+R ++T + V + N F A ++ D
Sbjct: 273 IPSISSI-GNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDD 331
Query: 158 LRRCKRDTY--PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC-DVNHYDFGEAGCKSCE 214
C + Y PLG S++ +CN G C+CK G TG KCD C N + +G C+
Sbjct: 332 ENVCI-ECYCNPLG---SIHDRCNGSGFCECKTGTTGPKCDECLPGNSWYYG---CQPNV 384
Query: 215 C-NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C N +N C + +C C D G C
Sbjct: 385 CDNELLHCQNGGTCHN-NVRCVCPDAYTGILC 415
>UNIPROTKB|I3LV27 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 EMBL:CU993814
Ensembl:ENSSSCT00000024191 Uniprot:I3LV27
Length = 1668
Score = 224 (83.9 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 49/141 (34%), Positives = 68/141 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G SNRC + G G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 78 CNCHGHSNRC--------KDG-SGICINCQHNTAGEHCERCKEGYYGNAIHGSCQACLCP 128
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVK 113
S C G RC CKPG TG C+RC ++ FG C+ C CN G +
Sbjct: 129 HSNSFATGCIVTGGNMRCLCKPGYTGTLCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLV 187
Query: 114 NTPNCDSVKGQCESAQLSSRG 134
+ CD + G C + + G
Sbjct: 188 S---CDPLTGDCMNQEPKDSG 205
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 48/167 (28%), Positives = 70/167 (41%)
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C +Y + G + C P ++ C G C + Q ++ G H E + ++ +
Sbjct: 59 CSPGYYRDNK-GFYTGRCVPCNCHGHSNRCKDGSGICINCQHNTAGE-HCE---RCKEGY 113
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD- 204
GN I C+ P H S C G RC CKPG TG C+RC ++
Sbjct: 114 --YGNAIHG--SCQACLCP--HSNSFATGCIVTGGNMRCLCKPGYTGTLCERCAPGYFGN 167
Query: 205 ---FGEAGCKSCECNPAGSVKNTPNCDSVKGQC---ECKDNVEGAQC 245
FG C+ C CN G + + CD + G C E KD+ G +C
Sbjct: 168 PQKFG-GSCQPCNCNSNGQLVS---CDPLTGDCMNQEPKDSGPGEEC 210
>UNIPROTKB|F1RIQ1 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:CU929759 Ensembl:ENSSSCT00000003491 Uniprot:F1RIQ1
Length = 489
Score = 216 (81.1 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 49/158 (31%), Positives = 77/158 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN + RC F+ EL+ +G GG C C+ G +C C+ +++
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGQSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPITSRKA 271
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS- 111
C AC C+PIG+ CN + G+C CK GVTG C+RC Y + C+ P +
Sbjct: 272 CRACQCHPIGATGGTCNQTSGQCSCKIGVTGLTCNRCGPG-YQQSHSPRMPCQRIPEATT 330
Query: 112 -VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ TP S QC++ +S +VH LR ++++
Sbjct: 331 MLATTPRAYSADPQCQNYCNTSDTKVHMSLRRYCQQDY 368
Score = 134 (52.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 50/179 (27%), Positives = 73/179 (40%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFG--------EAGCKSCECNP-AGSVKNTPNCDSVKGQ 124
RC+C+ TG C+ C +H D+ C C CN A + + G
Sbjct: 174 RCRCRHHTTGPGCESCRPSHRDWPWRPATPQHPHPCLPCSCNQHARRCRFNSELFRLSGG 233
Query: 125 CESAQLSSRGRVHTELRV--QSRKNF--DPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN 179
+S + R R HT R + F DP+ I + C+ +P+G G CN
Sbjct: 234 -QSGGVCERCRHHTAGRHCHYCQPGFWRDPS-QPITSRKACRACQCHPIGATGGT---CN 288
Query: 180 -SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS--VKNTPNCDSVKGQCE 235
+ G+C CK GVTG C+RC Y + C+ P + + TP S QC+
Sbjct: 289 QTSGQCSCKIGVTGLTCNRCGPG-YQQSHSPRMPCQRIPEATTMLATTPRAYSADPQCQ 346
>UNIPROTKB|F1SBB3 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 EMBL:CU993814 Ensembl:ENSSSCT00000004108 OMA:RAANQSS
Uniprot:F1SBB3
Length = 1724
Score = 224 (83.9 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 49/141 (34%), Positives = 68/141 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNC+G SNRC + G G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 78 CNCHGHSNRC--------KDG-SGICINCQHNTAGEHCERCKEGYYGNAIHGSCQACLCP 128
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVK 113
S C G RC CKPG TG C+RC ++ FG C+ C CN G +
Sbjct: 129 HSNSFATGCIVTGGNMRCLCKPGYTGTLCERCAPGYFGNPQKFG-GSCQPCNCNSNGQLV 187
Query: 114 NTPNCDSVKGQCESAQLSSRG 134
+ CD + G C + + G
Sbjct: 188 S---CDPLTGDCMNQEPKDSG 205
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 48/167 (28%), Positives = 70/167 (41%)
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C +Y + G + C P ++ C G C + Q ++ G H E + ++ +
Sbjct: 59 CSPGYYRDNK-GFYTGRCVPCNCHGHSNRCKDGSGICINCQHNTAGE-HCE---RCKEGY 113
Query: 149 DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD- 204
GN I C+ P H S C G RC CKPG TG C+RC ++
Sbjct: 114 --YGNAIHG--SCQACLCP--HSNSFATGCIVTGGNMRCLCKPGYTGTLCERCAPGYFGN 167
Query: 205 ---FGEAGCKSCECNPAGSVKNTPNCDSVKGQC---ECKDNVEGAQC 245
FG C+ C CN G + + CD + G C E KD+ G +C
Sbjct: 168 PQKFG-GSCQPCNCNSNGQLVS---CDPLTGDCMNQEPKDSGPGEEC 210
>UNIPROTKB|F1S575 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 OMA:YCECFGH
EMBL:CU179665 EMBL:CU407227 Ensembl:ENSSSCT00000007505
Uniprot:F1S575
Length = 469
Score = 215 (80.7 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 48/136 (35%), Positives = 71/136 (52%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C G SNRC + +L N C+ C+ + G +CE CR Y++ + +N C
Sbjct: 287 CECFGHSNRCSYI-DLLNTV----ICVSCKHNTRGQHCELCRLGYFRNASAELDDENVCI 341
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC-DVNHYDFGEAGCKSCEC-NPAGSVK 113
C CNP+GS++ +CN G C+CK G TG KCD C N + +G C+ C N +
Sbjct: 342 ECYCNPLGSVHDRCNGSGFCECKTGTTGPKCDECLPGNSWHYG---CQPNVCDNELLHCQ 398
Query: 114 NTPNC-DSVKGQCESA 128
N C ++V+ C +A
Sbjct: 399 NGGTCHNNVRCLCPAA 414
Score = 143 (55.4 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 61/212 (28%), Positives = 88/212 (41%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT- 115
C CN ++ + NS+ C+C+ TG C +C N Y S P G+ NT
Sbjct: 220 CKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKN-YQGRPWSPGSYLPIPKGTA-NTC 277
Query: 116 -PNCDSVKGQCESAQLSSR----GRVHTELRVQSRKN-------------FDPAGNRIWD 157
P+ S+ G CE S+R ++T + V + N F A + D
Sbjct: 278 IPSISSI-GNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAELDD 336
Query: 158 LRRCKRDTY--PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC-DVNHYDFGEAGCKSCE 214
C + Y PLG S++ +CN G C+CK G TG KCD C N + +G C+
Sbjct: 337 ENVCI-ECYCNPLG---SVHDRCNGSGFCECKTGTTGPKCDECLPGNSWHYG---CQPNV 389
Query: 215 C-NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C N +N C + +C C G C
Sbjct: 390 CDNELLHCQNGGTCHN-NVRCLCPAAYTGILC 420
>UNIPROTKB|Q9Y2I2 [details] [associations]
symbol:NTNG1 "Netrin-G1" species:9606 "Homo sapiens"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0046658 "anchored to plasma
membrane" evidence=ISS] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 Orphanet:3095 PDB:3ZYJ
PDBsum:3ZYJ EMBL:AB023193 EMBL:AY358365 EMBL:BX538348 EMBL:AL590427
EMBL:AL513187 EMBL:AC114491 EMBL:BC030220 IPI:IPI00412988
IPI:IPI00412989 IPI:IPI00477903 IPI:IPI00478407 IPI:IPI00478746
IPI:IPI00479203 RefSeq:NP_001106697.1 RefSeq:NP_001106699.1
RefSeq:NP_055732.2 UniGene:Hs.732535 ProteinModelPortal:Q9Y2I2
SMR:Q9Y2I2 STRING:Q9Y2I2 PhosphoSite:Q9Y2I2 DMDM:57015420
PRIDE:Q9Y2I2 DNASU:22854 Ensembl:ENST00000294649
Ensembl:ENST00000370065 Ensembl:ENST00000370066
Ensembl:ENST00000370067 Ensembl:ENST00000370068
Ensembl:ENST00000370071 Ensembl:ENST00000370073
Ensembl:ENST00000370074 Ensembl:ENST00000370076 GeneID:22854
KEGG:hsa:22854 UCSC:uc001dvc.4 UCSC:uc001dvd.1 UCSC:uc001dvf.4
UCSC:uc001dvh.4 CTD:22854 GeneCards:GC01P107682 HGNC:HGNC:23319
MIM:608818 neXtProt:NX_Q9Y2I2 PharmGKB:PA164742200 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 OMA:YCECFGH ChiTaRS:NTNG1
GenomeRNAi:22854 NextBio:43337 ArrayExpress:Q9Y2I2 Bgee:Q9Y2I2
CleanEx:HS_NTNG1 Genevestigator:Q9Y2I2 GermOnline:ENSG00000162631
Uniprot:Q9Y2I2
Length = 539
Score = 216 (81.1 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 48/136 (35%), Positives = 71/136 (52%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C G SNRC + +L N C+ C+ + G +CE CR Y++ + +N C
Sbjct: 364 CECFGHSNRCSYI-DLLNTV----ICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCI 418
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC-DVNHYDFGEAGCKSCEC-NPAGSVK 113
C CNP+GS++ +CN G C+CK G TG KCD C N + +G C+ C N +
Sbjct: 419 ECYCNPLGSIHDRCNGSGFCECKTGTTGPKCDECLPGNSWHYG---CQPNVCDNELLHCQ 475
Query: 114 NTPNC-DSVKGQCESA 128
N C ++V+ C +A
Sbjct: 476 NGGTCHNNVRCLCPAA 491
Score = 145 (56.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 61/212 (28%), Positives = 89/212 (41%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT- 115
C CN ++ + NS+ C+C+ TG C +C N Y S P G+ NT
Sbjct: 297 CKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKN-YQGRPWSPGSYLPIPKGTA-NTC 354
Query: 116 -PNCDSVKGQCESAQLSSR----GRVHTELRVQSRKN-------------FDPAGNRIWD 157
P+ S+ G CE S+R ++T + V + N F A ++ D
Sbjct: 355 IPSISSI-GNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDD 413
Query: 158 LRRCKRDTY--PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRC-DVNHYDFGEAGCKSCE 214
C + Y PLG S++ +CN G C+CK G TG KCD C N + +G C+
Sbjct: 414 ENVCI-ECYCNPLG---SIHDRCNGSGFCECKTGTTGPKCDECLPGNSWHYG---CQPNV 466
Query: 215 C-NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C N +N C + +C C G C
Sbjct: 467 CDNELLHCQNGGTCHN-NVRCLCPAAYTGILC 497
>UNIPROTKB|F1MF28 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 CTD:126147 OMA:GGPFLLT
EMBL:DAAA02047467 IPI:IPI01001483 RefSeq:NP_001193801.1
UniGene:Bt.48155 Ensembl:ENSBTAT00000061223 GeneID:785970
KEGG:bta:785970 NextBio:20927619 Uniprot:F1MF28
Length = 489
Score = 215 (80.7 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 48/158 (30%), Positives = 78/158 (49%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN + RC F+ EL+ +G GG C C+ G +C C+ +++ G
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPGQPISSRKA 271
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE--CNPAG 110
C AC C+PIG+ CN + G+C CK GVTG C+RC Y + C+
Sbjct: 272 CRACQCHPIGATGGACNQTNGQCSCKLGVTGLTCNRCGPG-YQQSRSPRMPCQRILEATT 330
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
++ TP+ S QC++ +S R+H L+ ++++
Sbjct: 331 TLATTPHAYSSDPQCQNYCNTSDTRIHMSLQRYCQQDY 368
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/196 (27%), Positives = 79/196 (40%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG--------EAGCKSCECNP 108
C C+ + + RC+C+ TG C+ C +H D+ C C CN
Sbjct: 157 CQCHGHAARCAARDRPPRCRCRHHTTGPGCESCQPSHRDWPWRPATPRHPHPCLPCSCNQ 216
Query: 109 -AGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV--QSRKNF--DPAGNRIWDLRRCKR 163
A + + G S + R R HT R + F DP G I + C+
Sbjct: 217 HARRCRFNSELFRLSGG-RSGGVCERCRHHTAGRHCHYCQPGFWRDP-GQPISSRKACRA 274
Query: 164 -DTYPLGH-GGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE--CNPAG 219
+P+G GG+ N Q N G+C CK GVTG C+RC Y + C+
Sbjct: 275 CQCHPIGATGGACN-QTN--GQCSCKLGVTGLTCNRCGPG-YQQSRSPRMPCQRILEATT 330
Query: 220 SVKNTPNCDSVKGQCE 235
++ TP+ S QC+
Sbjct: 331 TLATTPHAYSSDPQCQ 346
>UNIPROTKB|O00468 [details] [associations]
symbol:AGRN "Agrin" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0043236 "laminin binding" evidence=TAS]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=TAS] [GO:0045162 "clustering of voltage-gated
sodium channels" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043113 "receptor clustering" evidence=IDA;IMP]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0050808 "synapse organization"
evidence=TAS] [GO:0005200 "structural constituent of cytoskeleton"
evidence=TAS] [GO:0031012 "extracellular matrix" evidence=IDA;TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0045202 "synapse"
evidence=ISS] [GO:0045887 "positive regulation of synaptic growth
at neuromuscular junction" evidence=ISS] [GO:0032321 "positive
regulation of Rho GTPase activity" evidence=ISS] [GO:0051491
"positive regulation of filopodium assembly" evidence=ISS]
[GO:0035374 "chondroitin sulfate binding" evidence=ISS] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISS] [GO:0005509
"calcium ion binding" evidence=ISS] [GO:0033691 "sialic acid
binding" evidence=ISS] [GO:0002162 "dystroglycan binding"
evidence=ISS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0006024 "glycosaminoglycan biosynthetic
process" evidence=TAS] [GO:0006027 "glycosaminoglycan catabolic
process" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
[GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS]
[GO:0030204 "chondroitin sulfate metabolic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000742 InterPro:IPR002350 InterPro:IPR004850
Pfam:PF00008 Pfam:PF00050 Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026
PROSITE:PS51121 PROSITE:PS51465 SMART:SM00181 SMART:SM00280
GO:GO:0005886 Reactome:REACT_111045 Reactome:REACT_116125
GO:GO:0007411 GO:GO:0005615 GO:GO:0009986 GO:GO:0043525
GO:GO:0005200 GO:GO:0005975 GO:GO:0007528 GO:GO:0045887
GO:GO:0045944 GO:GO:0007009 GO:GO:0050808 GO:GO:0045202
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0005605 GO:GO:0043236
GO:GO:0043113 Orphanet:98913 GO:GO:0007213 PROSITE:PS01186
GO:GO:0033691 GO:GO:0043202 GO:GO:0002162 CTD:375790
eggNOG:NOG312635 HOGENOM:HOG000033860 HOVERGEN:HBG080471 KO:K06254
OrthoDB:EOG4HQDHD GO:GO:0030548 GO:GO:0035374 GO:GO:0043395
GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054
Pfam:PF01390 SMART:SM00180 SMART:SM00274 SMART:SM00282
SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 EMBL:U84406 EMBL:AB191264
EMBL:AL645608 EMBL:AF016903 EMBL:BC004220 EMBL:BC007649
EMBL:BC034009 EMBL:BC063620 IPI:IPI00374563 RefSeq:NP_940978.2
UniGene:Hs.273330 ProteinModelPortal:O00468 SMR:O00468
IntAct:O00468 MINT:MINT-4053526 STRING:O00468 PhosphoSite:O00468
PaxDb:O00468 PRIDE:O00468 Ensembl:ENST00000379370 GeneID:375790
KEGG:hsa:375790 UCSC:uc001ack.2 GeneCards:GC01P000946 HGNC:HGNC:329
HPA:HPA040090 MIM:103320 MIM:254300 neXtProt:NX_O00468
PharmGKB:PA24626 InParanoid:O00468 OMA:TNRWLRV GenomeRNAi:375790
NextBio:100617 ArrayExpress:O00468 Bgee:O00468 CleanEx:HS_AGRN
Genevestigator:O00468 GermOnline:ENSG00000188157 GO:GO:0005796
GO:GO:0030204 GO:GO:0045162 GO:GO:0006024 GO:GO:0006027
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497 Uniprot:O00468
Length = 2067
Score = 183 (69.5 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
Identities = 36/95 (37%), Positives = 54/95 (56%)
Query: 41 CRDNYYQKSGDNF--C-TACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 96
C+DN G C +AC CNP GS C+ + G+C C+PGV G +CDRC+ ++F
Sbjct: 774 CQDNITAARGVGLAGCPSACQCNPHGSYGGTCDPATGQCSCRPGVGGLRCDRCEPGFWNF 833
Query: 97 ------GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +GC C C+P G+V++ +C+ + G C
Sbjct: 834 RGIVTDGRSGCTPCSCDPQGAVRD--DCEQMTGLC 866
Score = 173 (66.0 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF------GEAGCKSCECNPAGSVKNT 224
GS C+ + G+C C+PGV G +CDRC+ ++F G +GC C C+P G+V++
Sbjct: 799 GSYGGTCDPATGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCSCDPQGAVRD- 857
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
+C+ + G C CK V G +C
Sbjct: 858 -DCEQMTGLCSCKPGVAGPKC 877
Score = 149 (57.5 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 31/92 (33%), Positives = 44/92 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNFCTACNCNPIGSLNLQCNS-EGRCQC 77
G C C+ G C++C ++ G + CT C+C+P G++ C G C C
Sbjct: 810 GQC-SCRPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCSCDPQGAVRDDCEQMTGLCSC 868
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
KPGV G KC +C G AGC++ PA
Sbjct: 869 KPGVAGPKCGQCPDGRA-LGPAGCEADASAPA 899
Score = 128 (50.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 46/130 (35%), Positives = 54/130 (41%)
Query: 97 GEAGCKS-CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
G AGC S C+CNP GS T CD GQC S R V LR +P
Sbjct: 785 GLAGCPSACQCNPHGSYGGT--CDPATGQC-----SCRPGVGG-LRCD---RCEPG---F 830
Query: 156 WDLRRCKRD----TYPLGHG--GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
W+ R D P G++ C G C CKPGV G KC +C G A
Sbjct: 831 WNFRGIVTDGRSGCTPCSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGRA-LGPA 889
Query: 209 GCKSCECNPA 218
GC++ PA
Sbjct: 890 GCEADASAPA 899
Score = 70 (29.7 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
Identities = 24/80 (30%), Positives = 34/80 (42%)
Query: 170 HGGS--LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
HGG+ NL+ CQC PG G C D ++ C+ C+ A + P
Sbjct: 1559 HGGAPCQNLEAG-RFHCQCPPGRVGPTC--ADE------KSPCQPNPCHGAAPCRVLPEG 1609
Query: 228 DSVKGQCECKDNVEGAQCRS 247
+ QCEC EG C++
Sbjct: 1610 GA---QCECPLGREGTFCQT 1626
Score = 48 (22.0 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GE G C NP N ++ + C+C G C
Sbjct: 1546 GECGDHPCLPNPCHGGAPCQNLEAGRFHCQCPPGRVGPTC 1585
Score = 44 (20.5 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 18/75 (24%), Positives = 26/75 (34%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD--FGEAGC---KSCECNPAGS 111
C+ P L +QC C K G +C + + YD G G +CE
Sbjct: 461 CDQAPSPCLGVQCAFGATCAVKNGQAACECLQACSSLYDPVCGSDGVTYGSACELEATAC 520
Query: 112 VKNTPNCDSVKGQCE 126
+ KG C+
Sbjct: 521 TLGREIQVARKGPCD 535
Score = 36 (17.7 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 184 CQCKPGVTGDKCDR 197
C C G +G C++
Sbjct: 1845 CLCPGGFSGPHCEK 1858
>UNIPROTKB|Q8WTR8 [details] [associations]
symbol:NTN5 "Netrin-5" species:9606 "Homo sapiens"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 PROSITE:PS00022 PROSITE:PS01186
EMBL:CH471177 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
HOGENOM:HOG000286017 EMBL:BC018654 EMBL:BC018697 EMBL:BC021210
EMBL:BC033207 IPI:IPI00102812 IPI:IPI00645833 RefSeq:NP_665806.1
UniGene:Hs.326217 ProteinModelPortal:Q8WTR8 SMR:Q8WTR8
DMDM:74730628 PaxDb:Q8WTR8 PRIDE:Q8WTR8 Ensembl:ENST00000270235
GeneID:126147 KEGG:hsa:126147 UCSC:uc002pkb.3 UCSC:uc002pkc.3
CTD:126147 GeneCards:GC19M049164 HGNC:HGNC:25208 neXtProt:NX_Q8WTR8
PharmGKB:PA164724232 eggNOG:NOG327968 HOVERGEN:HBG096704
InParanoid:Q8WTR8 OMA:GGPFLLT OrthoDB:EOG402WS1 GenomeRNAi:126147
NextBio:81704 Bgee:Q8WTR8 Genevestigator:Q8WTR8 Uniprot:Q8WTR8
Length = 489
Score = 213 (80.0 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 50/151 (33%), Positives = 72/151 (47%)
Query: 1 CNCNGFSNRCFFDKELYNRTG--HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF----- 53
C+CN + RC F+ EL+ +G GG C C+ G +C C+ +++
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRA 271
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS- 111
C AC C+PIG+ CN + G+C CK GVTG C+RC Y + C+ P +
Sbjct: 272 CRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPG-YQQSRSPRMPCQRIPEATT 330
Query: 112 -VKNTPNCDSVKGQCESAQLSSRGRVHTELR 141
+ TP S QC++ S RVH LR
Sbjct: 331 TLATTPGAYSSDPQCQNYCNMSDTRVHMSLR 361
Score = 134 (52.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 51/179 (28%), Positives = 72/179 (40%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFG--------EAGCKSCECNP-AGSVKNTPNCDSVKGQ 124
RC C+ TG C+ C +H D+ C C CN A + + G
Sbjct: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGG 233
Query: 125 CESAQLSSRGRVHTELRV--QSRKNF--DPAGNRIWDLRRCKR-DTYPLGHGGSLNLQCN 179
S + R R HT R + F DP+ I+ R C+ +P+G G CN
Sbjct: 234 -RSGGVCERCRHHTAGRHCHYCQPGFWRDPS-QPIFSRRACRACQCHPIGATGGT---CN 288
Query: 180 -SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS--VKNTPNCDSVKGQCE 235
+ G+C CK GVTG C+RC Y + C+ P + + TP S QC+
Sbjct: 289 QTSGQCTCKLGVTGLTCNRCGPG-YQQSRSPRMPCQRIPEATTTLATTPGAYSSDPQCQ 346
>UNIPROTKB|F1S0U7 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:CU550727 ProteinModelPortal:F1S0U7
Ensembl:ENSSSCT00000006293 Uniprot:F1S0U7
Length = 532
Score = 211 (79.3 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 52/156 (33%), Positives = 73/156 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C G SNRC + L T C+ C+ + G +C+ CR YY+ +N C
Sbjct: 355 CECYGHSNRCSYIDFLNVVT-----CVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCI 409
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNCN IGS++ +CN G C+C+ G G KCD C HY GC C+ +
Sbjct: 410 ECNCNQIGSVHDRCNETGFCECREGAAGPKCDDCLPTHY--WRQGCYPNVCDDDQLL--- 464
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C + G C Q + R +T +R + + DPA
Sbjct: 465 --CQN-GGTCVQNQRCTCPRGYTGVRCEQPR-CDPA 496
Score = 112 (44.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 26/76 (34%), Positives = 36/76 (47%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV-KNTPNCDSV 230
GS++ +CN G C+C+ G G KCD C HY GC C+ + +N C V
Sbjct: 417 GSVHDRCNETGFCECREGAAGPKCDDCLPTHY--WRQGCYPNVCDDDQLLCQNGGTC--V 472
Query: 231 KGQ-CECKDNVEGAQC 245
+ Q C C G +C
Sbjct: 473 QNQRCTCPRGYTGVRC 488
Score = 102 (41.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/66 (33%), Positives = 29/66 (43%)
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
CK G C C + +Y G A C C CN GSV + C+ G CEC++
Sbjct: 378 CKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHD--RCNET-GFCECREG 434
Query: 240 VEGAQC 245
G +C
Sbjct: 435 AAGPKC 440
Score = 102 (41.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 45/158 (28%), Positives = 60/158 (37%)
Query: 59 CNPIGSLNL-QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGS 111
C+ I LN+ C S CK G C C + +Y G A C C CN GS
Sbjct: 364 CSYIDFLNVVTCVS-----CKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGS 418
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGH 170
V + C+ G CE + ++ + L R+ P C D +
Sbjct: 419 VHD--RCNET-GFCECREGAAGPKCDDCLPTHYWRQGCYP--------NVCDDDQLLCQN 467
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCD--RCDVNHYDFG 206
GG+ C RC C G TG +C+ RCD D G
Sbjct: 468 GGT----CVQNQRCTCPRGYTGVRCEQPRCDPADDDSG 501
Score = 58 (25.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQCN-SEG--RCQCKPGVTGDKCDRC 89
+Y S C CN +L C+ EG +C+C TG C +C
Sbjct: 212 FYAISNIEVTGRCKCNLHANL---CSVREGSLQCECDHNTTGPDCGKC 256
Score = 58 (25.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS 49
C CN +N C R G C +C + GP+C KC+ ++ +S
Sbjct: 224 CKCNLHANLCSV------REG-SLQC-ECDHNTTGPDCGKCKRSFRTRS 264
>UNIPROTKB|Q96CW9 [details] [associations]
symbol:NTNG2 "Netrin-G2" species:9606 "Homo sapiens"
[GO:0046658 "anchored to plasma membrane" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR013111 Pfam:PF07974
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
PDB:3ZYI PDBsum:3ZYI eggNOG:NOG286598 HOVERGEN:HBG052676
EMBL:AB058760 EMBL:AY358165 EMBL:AL353631 EMBL:AL159997
EMBL:BC013770 IPI:IPI00432766 IPI:IPI00843936 RefSeq:NP_115925.2
UniGene:Hs.163642 PDB:3TBD PDB:3ZYG PDBsum:3TBD PDBsum:3ZYG
ProteinModelPortal:Q96CW9 SMR:Q96CW9 IntAct:Q96CW9 STRING:Q96CW9
PhosphoSite:Q96CW9 DMDM:34922606 PRIDE:Q96CW9
Ensembl:ENST00000372179 Ensembl:ENST00000393229 GeneID:84628
KEGG:hsa:84628 UCSC:uc004cbh.2 CTD:84628 GeneCards:GC09P135037
H-InvDB:HIX0008489 HGNC:HGNC:14288 neXtProt:NX_Q96CW9
PharmGKB:PA134962540 HOGENOM:HOG000231614 KO:K16359
OrthoDB:EOG47D9FR GenomeRNAi:84628 NextBio:74534
ArrayExpress:Q96CW9 Bgee:Q96CW9 CleanEx:HS_NTNG2
Genevestigator:Q96CW9 GermOnline:ENSG00000196358 Uniprot:Q96CW9
Length = 530
Score = 210 (79.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 52/156 (33%), Positives = 73/156 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C G SNRC + L T C+ C+ + G +C+ CR YY+ +N C
Sbjct: 353 CECYGHSNRCSYIDFLNVVT-----CVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCI 407
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNCN IGS++ +CN G C+C+ G G KCD C HY GC C+ +
Sbjct: 408 ECNCNQIGSVHDRCNETGFCECREGAAGPKCDDCLPTHY--WRQGCYPNVCDDDQLL--- 462
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C + G C Q + R +T +R + + DPA
Sbjct: 463 --CQN-GGTCLQNQRCACPRGYTGVRCEQPR-CDPA 494
Score = 126 (49.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 54/221 (24%), Positives = 80/221 (36%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG-EAGC-- 101
+Y S C CN +L +C+C+ TG C +C N AG
Sbjct: 275 FYAISNIEVIGRCKCNLHANLCSMREGSLQCECEHNTTGPDCGKCKKNFRTRSWRAGSYL 334
Query: 102 -----KSCECNPAGSVKN------TPNCDSVKG----QCESAQLSSRGRVHTELRVQSRK 146
C AGS N + C + C S + ++RG+ R+ +
Sbjct: 335 PLPHGSPNACATAGSFGNCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYR 394
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG 206
N + D C GS++ +CN G C+C+ G G KCD C HY
Sbjct: 395 N---GSAELDDENVCIECN--CNQIGSVHDRCNETGFCECREGAAGPKCDDCLPTHY--W 447
Query: 207 EAGCKSCECNPAGSV-KNTPNCDSVKGQ-CECKDNVEGAQC 245
GC C+ + +N C ++ Q C C G +C
Sbjct: 448 RQGCYPNVCDDDQLLCQNGGTC--LQNQRCACPRGYTGVRC 486
>UNIPROTKB|F1P3E3 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0005605 "basal lamina" evidence=IEA] [GO:0007213 "G-protein
coupled acetylcholine receptor signaling pathway" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043236
"laminin binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 InterPro:IPR000152 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113
GO:GO:0007213 PROSITE:PS01186 IPI:IPI00603573 InterPro:IPR002049
InterPro:IPR003645 InterPro:IPR001791 InterPro:IPR000082
InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
SUPFAM:SSF50242 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 InterPro:IPR011497
GeneTree:ENSGT00530000063501 EMBL:AADN02040845 EMBL:AADN02040846
EMBL:AADN02040847 EMBL:AADN02040848 EMBL:AADN02040849
EMBL:AADN02040850 EMBL:AADN02077829 Ensembl:ENSGALT00000003171
Uniprot:F1P3E3
Length = 1952
Score = 179 (68.1 bits), Expect = 3.2e-16, Sum P(4) = 3.2e-16
Identities = 37/95 (38%), Positives = 52/95 (54%)
Query: 41 CRDNYYQKSGDNF--C-TACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 96
C DN G C + C CNP GS C+ + G+C CKPGV G KCDRC+ ++F
Sbjct: 657 CPDNMTLALGVGAAGCPSTCQCNPYGSYGGTCDPATGQCSCKPGVGGLKCDRCEPGFWNF 716
Query: 97 ------GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
++GC C C+P GSV++ +C+ + G C
Sbjct: 717 RGIVTDSKSGCTPCNCDPVGSVRD--DCEQMTGLC 749
Score = 177 (67.4 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF------GEAGCKSCECNPAGSVKNT 224
GS C+ + G+C CKPGV G KCDRC+ ++F ++GC C C+P GSV++
Sbjct: 682 GSYGGTCDPATGQCSCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRD- 740
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
+C+ + G C CK + G +C
Sbjct: 741 -DCEQMTGLCSCKTGITGMKC 760
Score = 160 (61.4 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 40/127 (31%), Positives = 57/127 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCTACNCNPIGSLNLQCNS-EGRCQC 77
G C C+ G C++C ++ G + CT CNC+P+GS+ C G C C
Sbjct: 693 GQC-SCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRDDCEQMTGLCSC 751
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGC-------KSCE---CNPAGS---VKNTPNCDSVKGQ 124
K G+TG KC++C N G AGC KSCE C + V +C+
Sbjct: 752 KTGITGMKCNQCP-NGSKMGMAGCEKDPSAPKSCEEMSCEFGATCVEVNGFAHCECPSPL 810
Query: 125 CESAQLS 131
C A ++
Sbjct: 811 CSEANMT 817
Score = 138 (53.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 49/149 (32%), Positives = 60/149 (40%)
Query: 97 GEAGCKS-CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP-AGNR 154
G AGC S C+CNP GS T CD GQC G + + NF +
Sbjct: 668 GAAGCPSTCQCNPYGSYGGT--CDPATGQCSCKP--GVGGLKCDRCEPGFWNFRGIVTDS 723
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
C D P+G S+ C G C CK G+TG KC++C N G AGC+
Sbjct: 724 KSGCTPCNCD--PVG---SVRDDCEQMTGLCSCKTGITGMKCNQCP-NGSKMGMAGCEKD 777
Query: 214 ECNPAG----SVKNTPNCDSVKG--QCEC 236
P S + C V G CEC
Sbjct: 778 PSAPKSCEEMSCEFGATCVEVNGFAHCEC 806
Score = 57 (25.1 bits), Expect = 3.2e-16, Sum P(4) = 3.2e-16
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 159 RRCKRDTYPLGHGGSLNLQCNSEGR---CQCKPGVTGDKCDR 197
R C D++P HGG+ C +G+ C C G G C++
Sbjct: 1227 RPC--DSHPCLHGGT----CEDDGKEFTCSCPAGKGGAVCEK 1262
Score = 51 (23.0 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
C + P +GG+ + + S C C+ G +G C++
Sbjct: 1716 CTQKPNPCQNGGTCSPRLESY-ECACQRGFSGAHCEK 1751
Score = 46 (21.3 bits), Expect = 4.1e-15, Sum P(4) = 4.1e-15
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
P HGG +++ C+C TG C
Sbjct: 1451 PCHHGGICHVKEAEMFHCECLHSYTGPTC 1479
Score = 39 (18.8 bits), Expect = 3.2e-16, Sum P(4) = 3.2e-16
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 24 GHCLD-C----QGDRDGPNCEKCRDNYY 46
G C D C G DG CE+ R +Y
Sbjct: 547 GPCEDECGSGGSGSGDGSECEQDRCRHY 574
Score = 39 (18.8 bits), Expect = 3.2e-16, Sum P(4) = 3.2e-16
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C G+ +P +S +C C+ GA C
Sbjct: 1723 CQNGGTC--SPRLESY--ECACQRGFSGAHC 1749
Score = 37 (18.1 bits), Expect = 3.3e-14, Sum P(4) = 3.3e-14
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 184 CQCKPGVTGDKCDR 197
C C G G+ C+R
Sbjct: 1507 CACPMGREGEFCER 1520
>UNIPROTKB|F1NWQ6 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IEA] [GO:0043236 "laminin binding" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043113 "receptor
clustering" evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 InterPro:IPR000152 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0045944 GO:GO:0007009 GO:GO:0045202
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605
GO:GO:0043113 GO:GO:0007213 PROSITE:PS01186 GO:GO:0030548
GO:GO:2000541 GO:GO:0032314 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
OMA:TNRWLRV GO:GO:0001934 InterPro:IPR011497
GeneTree:ENSGT00530000063501 EMBL:AADN02040845 EMBL:AADN02040846
EMBL:AADN02040847 EMBL:AADN02040848 EMBL:AADN02040849
EMBL:AADN02040850 EMBL:AADN02077829 IPI:IPI01017232
Ensembl:ENSGALT00000040179 Uniprot:F1NWQ6
Length = 1998
Score = 179 (68.1 bits), Expect = 3.6e-16, Sum P(4) = 3.6e-16
Identities = 37/95 (38%), Positives = 52/95 (54%)
Query: 41 CRDNYYQKSGDNF--C-TACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 96
C DN G C + C CNP GS C+ + G+C CKPGV G KCDRC+ ++F
Sbjct: 707 CPDNMTLALGVGAAGCPSTCQCNPYGSYGGTCDPATGQCSCKPGVGGLKCDRCEPGFWNF 766
Query: 97 ------GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
++GC C C+P GSV++ +C+ + G C
Sbjct: 767 RGIVTDSKSGCTPCNCDPVGSVRD--DCEQMTGLC 799
Score = 177 (67.4 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF------GEAGCKSCECNPAGSVKNT 224
GS C+ + G+C CKPGV G KCDRC+ ++F ++GC C C+P GSV++
Sbjct: 732 GSYGGTCDPATGQCSCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRD- 790
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
+C+ + G C CK + G +C
Sbjct: 791 -DCEQMTGLCSCKTGITGMKC 810
Score = 160 (61.4 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 40/127 (31%), Positives = 57/127 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCTACNCNPIGSLNLQCNS-EGRCQC 77
G C C+ G C++C ++ G + CT CNC+P+GS+ C G C C
Sbjct: 743 GQC-SCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRDDCEQMTGLCSC 801
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGC-------KSCE---CNPAGS---VKNTPNCDSVKGQ 124
K G+TG KC++C N G AGC KSCE C + V +C+
Sbjct: 802 KTGITGMKCNQCP-NGSKMGMAGCEKDPSAPKSCEEMSCEFGATCVEVNGFAHCECPSPL 860
Query: 125 CESAQLS 131
C A ++
Sbjct: 861 CSEANMT 867
Score = 138 (53.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 49/149 (32%), Positives = 60/149 (40%)
Query: 97 GEAGCKS-CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP-AGNR 154
G AGC S C+CNP GS T CD GQC G + + NF +
Sbjct: 718 GAAGCPSTCQCNPYGSYGGT--CDPATGQCSCKP--GVGGLKCDRCEPGFWNFRGIVTDS 773
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
C D P+G S+ C G C CK G+TG KC++C N G AGC+
Sbjct: 774 KSGCTPCNCD--PVG---SVRDDCEQMTGLCSCKTGITGMKCNQCP-NGSKMGMAGCEKD 827
Query: 214 ECNPAG----SVKNTPNCDSVKG--QCEC 236
P S + C V G CEC
Sbjct: 828 PSAPKSCEEMSCEFGATCVEVNGFAHCEC 856
Score = 57 (25.1 bits), Expect = 3.6e-16, Sum P(4) = 3.6e-16
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 159 RRCKRDTYPLGHGGSLNLQCNSEGR---CQCKPGVTGDKCDR 197
R C D++P HGG+ C +G+ C C G G C++
Sbjct: 1279 RPC--DSHPCLHGGT----CEDDGKEFTCSCPAGKGGAVCEK 1314
Score = 51 (23.0 bits), Expect = 3.2e-14, Sum P(3) = 3.2e-14
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
C + P +GG+ + + S C C+ G +G C++
Sbjct: 1765 CTQKPNPCQNGGTCSPRLESY-ECACQRGFSGAHCEK 1800
Score = 46 (21.3 bits), Expect = 4.5e-15, Sum P(4) = 4.5e-15
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
P HGG +++ C+C TG C
Sbjct: 1503 PCHHGGICHVKEAEMFHCECLHSYTGPTC 1531
Score = 39 (18.8 bits), Expect = 3.6e-16, Sum P(4) = 3.6e-16
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 24 GHCLD-C----QGDRDGPNCEKCRDNYY 46
G C D C G DG CE+ R +Y
Sbjct: 597 GPCEDECGSGGSGSGDGSECEQDRCRHY 624
Score = 39 (18.8 bits), Expect = 3.6e-16, Sum P(4) = 3.6e-16
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C G+ +P +S +C C+ GA C
Sbjct: 1772 CQNGGTC--SPRLESY--ECACQRGFSGAHC 1798
Score = 37 (18.1 bits), Expect = 3.6e-14, Sum P(4) = 3.6e-14
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 184 CQCKPGVTGDKCDR 197
C C G G+ C+R
Sbjct: 1559 CACPMGREGEFCER 1572
>UNIPROTKB|F1MSI2 [details] [associations]
symbol:AGRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043113 "receptor clustering" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0043236 "laminin binding"
evidence=IEA] [GO:0007213 "G-protein coupled acetylcholine receptor
signaling pathway" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045944 GO:GO:0007009
GO:GO:0045202 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 GO:GO:0030548 GO:GO:2000541 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054
Pfam:PF01390 SMART:SM00180 SMART:SM00274 SMART:SM00282
SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV GO:GO:0045213
GO:GO:0001934 InterPro:IPR011497 GeneTree:ENSGT00530000063501
GO:GO:0008582 EMBL:DAAA02043249 IPI:IPI00708223
Ensembl:ENSBTAT00000017563 Uniprot:F1MSI2
Length = 2032
Score = 181 (68.8 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 36/95 (37%), Positives = 53/95 (55%)
Query: 41 CRDNYYQKSGDNF--C-TACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF 96
C+DN G C ++C CNP GS C+ G+C C+PGV G KCDRC+ ++F
Sbjct: 765 CQDNITVAQGVGLAGCPSSCQCNPHGSYGGTCDPVTGQCSCRPGVGGLKCDRCEPGFWNF 824
Query: 97 ------GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +GC C C+P G+V++ +C+ + G C
Sbjct: 825 RGIVTDGRSGCTPCSCDPRGAVRD--DCEQMTGLC 857
Score = 174 (66.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF------GEAGCKSCECNPAGSVKNT 224
GS C+ G+C C+PGV G KCDRC+ ++F G +GC C C+P G+V++
Sbjct: 790 GSYGGTCDPVTGQCSCRPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTPCSCDPRGAVRD- 848
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
+C+ + G C CK V G +C
Sbjct: 849 -DCEQMTGLCSCKPGVAGPKC 868
Score = 146 (56.5 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 30/91 (32%), Positives = 43/91 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNFCTACNCNPIGSLNLQCNS-EGRCQC 77
G C C+ G C++C ++ G + CT C+C+P G++ C G C C
Sbjct: 801 GQC-SCRPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTPCSCDPRGAVRDDCEQMTGLCSC 859
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
KPGV G KC +C G AGC++ P
Sbjct: 860 KPGVAGPKCGQCPDGRA-LGPAGCETDSSPP 889
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 45/129 (34%), Positives = 54/129 (41%)
Query: 97 GEAGC-KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
G AGC SC+CNP GS T CD V GQC S R V L+ +P
Sbjct: 776 GLAGCPSSCQCNPHGSYGGT--CDPVTGQC-----SCRPGVGG-LKCD---RCEPG---F 821
Query: 156 WDLRRCKRD----TYPLGHG--GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
W+ R D P G++ C G C CKPGV G KC +C G A
Sbjct: 822 WNFRGIVTDGRSGCTPCSCDPRGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGRA-LGPA 880
Query: 209 GCKSCECNP 217
GC++ P
Sbjct: 881 GCETDSSPP 889
Score = 66 (28.3 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 172 GSLNLQCNSEGR--CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 229
G Q GR CQC PG G C + D C+ C+ A + P ++
Sbjct: 1547 GGAPCQALEAGRFHCQCPPGRFGPTC----ADEKD----PCQPNPCHGAAPCRVLPQGEA 1598
Query: 230 VKGQCECKDNVEGAQCRS 247
+CEC EG+ C++
Sbjct: 1599 ---KCECPHGREGSLCQT 1613
Score = 58 (25.5 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ-CNSEGRCQCKPGVTGDKCDR 197
RV R+ P + R C D+ P HGG+ Q ++ C C G G C++
Sbjct: 1302 RVPGRRPLPPGTQQ--PRRPC--DSQPCLHGGTCQDQGSGADFTCSCPAGTGGAVCEK 1355
Score = 42 (19.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
P HG S L + C C G +G C++
Sbjct: 1812 PCLHGASC-LPREASYECLCPAGFSGLHCEK 1841
>UNIPROTKB|G3N1H6 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:DAAA02032274 EMBL:DAAA02032272 EMBL:DAAA02032273
Ensembl:ENSBTAT00000064483 Uniprot:G3N1H6
Length = 595
Score = 209 (78.6 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 52/156 (33%), Positives = 72/156 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C G SNRC + L T C+ C+ + G +C+ CR YY+ +N C
Sbjct: 418 CECYGHSNRCSYIDFLNVVT-----CVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCI 472
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNT 115
CNCN IGS++ +CN G C+C+ G G KCD C HY GC C+ +
Sbjct: 473 ECNCNQIGSVHDRCNETGFCECREGAAGPKCDDCLPTHY--WRQGCYPNVCDDDQLL--- 527
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA 151
C + G C Q + R +T R + + DPA
Sbjct: 528 --CQN-GGTCVQNQRCACPRGYTGARCEQPR-CDPA 559
Score = 116 (45.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 27/76 (35%), Positives = 37/76 (48%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV-KNTPNCDSV 230
GS++ +CN G C+C+ G G KCD C HY GC C+ + +N C V
Sbjct: 480 GSVHDRCNETGFCECREGAAGPKCDDCLPTHY--WRQGCYPNVCDDDQLLCQNGGTC--V 535
Query: 231 KGQ-CECKDNVEGAQC 245
+ Q C C GA+C
Sbjct: 536 QNQRCACPRGYTGARC 551
Score = 102 (41.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/66 (33%), Positives = 29/66 (43%)
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
CK G C C + +Y G A C C CN GSV + C+ G CEC++
Sbjct: 441 CKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHD--RCNET-GFCECREG 497
Query: 240 VEGAQC 245
G +C
Sbjct: 498 AAGPKC 503
Score = 101 (40.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 43/151 (28%), Positives = 58/151 (38%)
Query: 59 CNPIGSLNL-QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGS 111
C+ I LN+ C S CK G C C + +Y G A C C CN GS
Sbjct: 427 CSYIDFLNVVTCVS-----CKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGS 481
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGH 170
V + C+ G CE + ++ + L R+ P C D +
Sbjct: 482 VHD--RCNET-GFCECREGAAGPKCDDCLPTHYWRQGCYP--------NVCDDDQLLCQN 530
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCD--RCD 199
GG+ C RC C G TG +C+ RCD
Sbjct: 531 GGT----CVQNQRCACPRGYTGARCEQPRCD 557
Score = 60 (26.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQCN-SEG--RCQCKPGVTGDKCDRC 89
+Y S C CN +L C+ EG +C+C+ TG C +C
Sbjct: 275 FYAISNIEVTGRCKCNLHANL---CSVREGSLQCECEHNTTGPDCGKC 319
Score = 60 (26.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS 49
C CN +N C R G C +C+ + GP+C KC+ ++ +S
Sbjct: 287 CKCNLHANLCSV------REG-SLQC-ECEHNTTGPDCGKCKRSFRTRS 327
>RGD|2067 [details] [associations]
symbol:Agrn "agrin" species:10116 "Rattus norvegicus" [GO:0001932
"regulation of protein phosphorylation" evidence=IDA] [GO:0001934
"positive regulation of protein phosphorylation" evidence=ISO]
[GO:0002162 "dystroglycan binding" evidence=IDA] [GO:0005509 "calcium
ion binding" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005578 "proteinaceous extracellular matrix"
evidence=TAS] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=ISO;ISS] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007009 "plasma membrane organization"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0007416 "synapse assembly" evidence=IMP] [GO:0007528
"neuromuscular junction development" evidence=ISO;TAS] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=ISO] [GO:0009986 "cell surface" evidence=ISO] [GO:0010469
"regulation of receptor activity" evidence=ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030548 "acetylcholine receptor regulator activity" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] [GO:0032314
"regulation of Rac GTPase activity" evidence=ISO] [GO:0032321
"positive regulation of Rho GTPase activity" evidence=IDA]
[GO:0033691 "sialic acid binding" evidence=ISS] [GO:0035374
"chondroitin sulfate binding" evidence=ISS] [GO:0043113 "receptor
clustering" evidence=ISO;ISS;IDA] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=ISS] [GO:0043525 "positive regulation
of neuron apoptotic process" evidence=ISO] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045213 "neurotransmitter receptor metabolic
process" evidence=ISO] [GO:0045887 "positive regulation of synaptic
growth at neuromuscular junction" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IDA] [GO:2000541 "positive regulation
of protein geranylgeranylation" evidence=ISO] InterPro:IPR000742
InterPro:IPR002350 Pfam:PF00008 Pfam:PF00050 Pfam:PF07648
PROSITE:PS50026 PROSITE:PS51465 SMART:SM00181 SMART:SM00280 RGD:2067
GO:GO:0005615 GO:GO:0009986 GO:GO:0043525 GO:GO:0007528 GO:GO:0045887
GO:GO:0045944 GO:GO:0007009 GO:GO:0045202 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416
GO:GO:0005605 GO:GO:0043113 PROSITE:PS01186 GO:GO:0033691
GO:GO:0002162 CTD:375790 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 GO:GO:0030548 GO:GO:0035374
GO:GO:0043395 GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497 EMBL:M64780
EMBL:S44194 IPI:IPI00188885 IPI:IPI00231249 IPI:IPI00231250
IPI:IPI00231251 IPI:IPI00231252 PIR:JH0399 RefSeq:NP_786930.1
UniGene:Rn.2163 PDB:3V64 PDB:3V65 PDBsum:3V64 PDBsum:3V65
ProteinModelPortal:P25304 SMR:P25304 IntAct:P25304 STRING:P25304
PRIDE:P25304 GeneID:25592 KEGG:rno:25592 InParanoid:P25304
NextBio:607271 ArrayExpress:P25304 Genevestigator:P25304
GermOnline:ENSRNOG00000020205 GO:GO:0001932 Uniprot:P25304
Length = 1959
Score = 186 (70.5 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 35/95 (36%), Positives = 56/95 (58%)
Query: 41 CRDNYYQKSGDNF--C-TACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 96
C+DN+ G C + C+CNP GS + C+ + G+C C+PGV G +CDRC+ ++F
Sbjct: 669 CQDNFTAAQGVGLAGCPSTCHCNPHGSYSGTCDPATGQCSCRPGVGGLRCDRCEPGFWNF 728
Query: 97 ------GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +GC C C+P G+V++ +C+ + G C
Sbjct: 729 RGIVTDGHSGCTPCSCDPRGAVRD--DCEQMTGLC 761
Score = 171 (65.3 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF------GEAGCKSCECNPAGSVKNT 224
GS + C+ + G+C C+PGV G +CDRC+ ++F G +GC C C+P G+V++
Sbjct: 694 GSYSGTCDPATGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTPCSCDPRGAVRD- 752
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
+C+ + G C C+ V G +C
Sbjct: 753 -DCEQMTGLCSCRPGVAGPKC 772
Score = 144 (55.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 29/96 (30%), Positives = 44/96 (45%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNFCTACNCNPIGSLNLQCNS-EGRCQC 77
G C C+ G C++C ++ G + CT C+C+P G++ C G C C
Sbjct: 705 GQC-SCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTPCSCDPRGAVRDDCEQMTGLCSC 763
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
+PGV G KC +C G GC++ P V+
Sbjct: 764 RPGVAGPKCGQCPDGQV-LGHLGCEADPMTPVTCVE 798
Score = 59 (25.8 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 24/63 (38%), Positives = 26/63 (41%)
Query: 170 HGGSLNLQCNSEGR--CQCKPGVTGDKC-DR---CDVNHYDFGEAGCK-------SCECN 216
HGG+L Q G CQC PG G C D C N G A C+ CEC
Sbjct: 1450 HGGAL-CQALEAGMFLCQCPPGRFGPTCADEKSPCQPNPCH-GAAPCRVLSSGGAKCEC- 1506
Query: 217 PAG 219
P G
Sbjct: 1507 PLG 1509
Score = 58 (25.5 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 164 DTYPLGHGGSLNLQCNSEG-RCQCKPGVTGDKCDR 197
D+ P HGG+ Q + +G C C G G C++
Sbjct: 1225 DSQPCLHGGTCQDQDSGKGFTCSCTAGRGGSVCEK 1259
Score = 37 (18.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 170 HGGSLNLQCNSEG-RCQCKPGVTGDKC 195
HG + +S G +C+C G +G C
Sbjct: 1489 HGAAPCRVLSSGGAKCECPLGRSGTFC 1515
Score = 36 (17.7 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
P +GGS + + C C G +G C++
Sbjct: 1720 PCLNGGSC-VPREATYECLCPGGFSGLHCEK 1749
>RGD|1307089 [details] [associations]
symbol:Ntng2 "netrin G2" species:10116 "Rattus norvegicus"
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0046658 "anchored to plasma
membrane" evidence=IEA;ISO] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 RGD:1307089 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 EMBL:CH474001
GeneTree:ENSGT00700000104042 CTD:84628 KO:K16359 IPI:IPI00561682
RefSeq:NP_001101295.1 UniGene:Rn.218540 Ensembl:ENSRNOT00000045919
GeneID:311836 KEGG:rno:311836 UCSC:RGD:1307089 NextBio:664255
Uniprot:D4A9F4
Length = 564
Score = 208 (78.3 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 45/130 (34%), Positives = 61/130 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C G SNRC + L T C+ C+ + G +C+ CR YY+ +N C
Sbjct: 388 CECYGHSNRCSYIDFLNVVT-----CVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCI 442
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--KSCE-----CNP 108
CNCN IGS++ +CN G C+C+ G G KCD C HY GC C+ C
Sbjct: 443 ECNCNQIGSVHDRCNETGFCECREGAVGPKCDDCLPTHY--WRQGCYPNVCDDDQLLCQN 500
Query: 109 AGSVKNTPNC 118
G+ + C
Sbjct: 501 GGTCQQNQRC 510
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 53/211 (25%), Positives = 78/211 (36%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCKS 103
+Y S C CN +L +C+C+ TG C +C N AG S
Sbjct: 275 FYAISNIEVIGRCKCNLHANLCTVREGSLQCECEHNTTGPDCGKCKKNFRTRAWRAG--S 332
Query: 104 CECNPAGSVKNTPNCDSVKGQCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
P GS S G + S+ + T +++ R P I + + C
Sbjct: 333 YLPLPHGSPNACAAAGSAFGTVTIPVAIPSQAKDSTLFQLKPRS---PQVIPIEEFQDC- 388
Query: 163 RDTYPLGHGGSLN-LQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEAG------CKSCE 214
+ Y GH + + + C CK G C C + +Y G A C C
Sbjct: 389 -ECY--GHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECN 445
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
CN GSV + C+ G CEC++ G +C
Sbjct: 446 CNQIGSVHD--RCNET-GFCECREGAVGPKC 473
Score = 112 (44.5 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 24/75 (32%), Positives = 35/75 (46%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV-KNTPNCDSV 230
GS++ +CN G C+C+ G G KCD C HY GC C+ + +N C
Sbjct: 450 GSVHDRCNETGFCECREGAVGPKCDDCLPTHY--WRQGCYPNVCDDDQLLCQNGGTCQQN 507
Query: 231 KGQCECKDNVEGAQC 245
+ +C C G +C
Sbjct: 508 Q-RCACPPGYAGIRC 521
Score = 107 (42.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 52/184 (28%), Positives = 72/184 (39%)
Query: 59 CNPIGSLNL-QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGS 111
C+ I LN+ C S CK G C C + +Y G A C C CN GS
Sbjct: 397 CSYIDFLNVVTCVS-----CKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGS 451
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGH 170
V + C+ G CE + + + L R+ P C D +
Sbjct: 452 VHD--RCNET-GFCECREGAVGPKCDDCLPTHYWRQGCYP--------NVCDDDQLLCQN 500
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCD--RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
GG+ C RC C PG G +C+ RCD+ +AG C+ P G+V P D
Sbjct: 501 GGT----CQQNQRCACPPGYAGIRCEQPRCDLAD----DAG-PDCDRAP-GTV---PRPD 547
Query: 229 SVKG 232
++ G
Sbjct: 548 TLLG 551
Score = 63 (27.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY 45
C CN +N C R G C +C+ + GP+C KC+ N+
Sbjct: 287 CKCNLHANLCTV------REG-SLQC-ECEHNTTGPDCGKCKKNF 323
>UNIPROTKB|F1Q2Z6 [details] [associations]
symbol:AGRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043113 "receptor clustering" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043236 "laminin
binding" evidence=IEA] [GO:0007213 "G-protein coupled acetylcholine
receptor signaling pathway" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045944 GO:GO:0007009
GO:GO:0045202 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 CTD:375790 KO:K06254 GO:GO:0030548 GO:GO:2000541
GO:GO:0032314 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497
GeneTree:ENSGT00530000063501 GO:GO:0008582 EMBL:AAEX03003837
EMBL:AAEX03003838 RefSeq:XP_536713.3 Ensembl:ENSCAFT00000030741
GeneID:479574 KEGG:cfa:479574 Uniprot:F1Q2Z6
Length = 2046
Score = 184 (69.8 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 36/95 (37%), Positives = 55/95 (57%)
Query: 41 CRDNYYQKSGDNF--C-TACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 96
C+DN G C ++C CNP GS + C+ + G+C C+PGV G KCDRC+ ++F
Sbjct: 776 CQDNVTAARGVGLAGCPSSCQCNPHGSYSGTCDPTTGQCSCRPGVGGLKCDRCEPGFWNF 835
Query: 97 ------GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +GC C C+P G+V++ +C+ + G C
Sbjct: 836 RGIVTDGRSGCTPCSCDPRGAVRD--DCEQMTGLC 868
Score = 177 (67.4 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF------GEAGCKSCECNPAGSVKNT 224
GS + C+ + G+C C+PGV G KCDRC+ ++F G +GC C C+P G+V++
Sbjct: 801 GSYSGTCDPTTGQCSCRPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTPCSCDPRGAVRD- 859
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
+C+ + G C CK V G +C
Sbjct: 860 -DCEQMTGLCSCKPGVAGPKC 879
Score = 150 (57.9 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 30/91 (32%), Positives = 43/91 (47%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNFCTACNCNPIGSLNLQCNS-EGRCQC 77
G C C+ G C++C ++ G + CT C+C+P G++ C G C C
Sbjct: 812 GQC-SCRPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTPCSCDPRGAVRDDCEQMTGLCSC 870
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
KPGV G KC +C H G GC++ P
Sbjct: 871 KPGVAGPKCGQCPDGHA-LGPGGCETDSLAP 900
Score = 61 (26.5 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
CQC PG G C D N C+ C+ A + P+ ++ +CEC GA
Sbjct: 1575 CQCPPGRFGPTCSG-DKNP-------CEPNPCHGAAPCRVLPDGEA---KCECPRGRGGA 1623
Query: 244 QCRS 247
C++
Sbjct: 1624 ICQT 1627
Score = 55 (24.4 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 207 EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
EAG C+C P + P C K CE A CR
Sbjct: 1569 EAGMFHCQCPPG---RFGPTCSGDKNPCEPNPCHGAAPCR 1605
Score = 40 (19.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 21/85 (24%), Positives = 29/85 (34%)
Query: 21 GHGGHCL---DCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQC 77
G CL C+G +GP C G ++ + C L L C +
Sbjct: 267 GQTATCLCPATCRGPPEGPVCGS--------DGADYPSECQL-----LRLACTRQENIVK 313
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCK 102
K G CD C H+D C+
Sbjct: 314 K--FDGP-CDPCQGTHHDLSRV-CR 334
Score = 37 (18.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 170 HGGS-LNLQCNSEGRCQCKPGVTGDKC 195
HG + + + E +C+C G G C
Sbjct: 1599 HGAAPCRVLPDGEAKCECPRGRGGAIC 1625
Score = 36 (17.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
+P +G S L + C C G +G C++
Sbjct: 1825 HPCLNGASC-LPREASYECLCPGGFSGLHCEK 1855
>MGI|MGI:2159341 [details] [associations]
symbol:Ntng2 "netrin G2" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 MGI:MGI:2159341 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186 EMBL:CH466542
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
eggNOG:NOG286598 HOVERGEN:HBG052676 CTD:84628 HOGENOM:HOG000231614
KO:K16359 OrthoDB:EOG47D9FR EMBL:AB052336 EMBL:AB052337
EMBL:AB052338 EMBL:AF475079 EMBL:AF475080 EMBL:AL772379
IPI:IPI00311068 IPI:IPI00311069 IPI:IPI00625609 RefSeq:NP_598007.1
RefSeq:NP_598008.1 UniGene:Mm.442448 ProteinModelPortal:Q8R4F1
SMR:Q8R4F1 STRING:Q8R4F1 PRIDE:Q8R4F1 Ensembl:ENSMUST00000048455
Ensembl:ENSMUST00000091153 Ensembl:ENSMUST00000102873 GeneID:171171
KEGG:mmu:171171 InParanoid:A2AKX0 OMA:QPRCDPA ChiTaRS:NTNG2
NextBio:370580 Bgee:Q8R4F1 CleanEx:MM_NTNG2 Genevestigator:Q8R4F1
GermOnline:ENSMUSG00000035513 Uniprot:Q8R4F1
Length = 589
Score = 208 (78.3 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 45/130 (34%), Positives = 61/130 (46%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCT 55
C C G SNRC + L T C+ C+ + G +C+ CR YY+ +N C
Sbjct: 413 CECYGHSNRCSYIDFLNVVT-----CVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCI 467
Query: 56 ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC--KSCE-----CNP 108
CNCN IGS++ +CN G C+C+ G G KCD C HY GC C+ C
Sbjct: 468 ECNCNQIGSVHDRCNETGFCECREGAVGPKCDDCLPTHY--WRQGCYPNVCDDDQLLCQN 525
Query: 109 AGSVKNTPNC 118
G+ + C
Sbjct: 526 GGTCQQNQRC 535
Score = 112 (44.5 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 24/75 (32%), Positives = 35/75 (46%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV-KNTPNCDSV 230
GS++ +CN G C+C+ G G KCD C HY GC C+ + +N C
Sbjct: 475 GSVHDRCNETGFCECREGAVGPKCDDCLPTHY--WRQGCYPNVCDDDQLLCQNGGTCQQN 532
Query: 231 KGQCECKDNVEGAQC 245
+ +C C G +C
Sbjct: 533 Q-RCACPPGYTGIRC 546
Score = 110 (43.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 44/152 (28%), Positives = 59/152 (38%)
Query: 59 CNPIGSLNL-QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGS 111
C+ I LN+ C S CK G C C + +Y G A C C CN GS
Sbjct: 422 CSYIDFLNVVTCVS-----CKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGS 476
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGH 170
V + C+ G CE + + + L R+ P C D +
Sbjct: 477 VHD--RCNET-GFCECREGAVGPKCDDCLPTHYWRQGCYP--------NVCDDDQLLCQN 525
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCD--RCDV 200
GG+ C RC C PG TG +C+ RCD+
Sbjct: 526 GGT----CQQNQRCACPPGYTGIRCEQPRCDL 553
Score = 101 (40.6 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 22/66 (33%), Positives = 29/66 (43%)
Query: 186 CKPGVTGDKCDRCDVNHYDFGEAG------CKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
CK G C C + +Y G A C C CN GSV + C+ G CEC++
Sbjct: 436 CKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHD--RCNET-GFCECREG 492
Query: 240 VEGAQC 245
G +C
Sbjct: 493 AVGPKC 498
Score = 66 (28.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 14/48 (29%), Positives = 19/48 (39%)
Query: 45 YYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVN 92
+Y S C CN +L +C+C+ TG C RC N
Sbjct: 275 FYAISNIEVIGRCKCNLHANLCTVREGSLQCECEHNTTGPDCGRCKKN 322
Score = 60 (26.2 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY 45
C CN +N C R G C +C+ + GP+C +C+ N+
Sbjct: 287 CKCNLHANLCTV------REG-SLQC-ECEHNTTGPDCGRCKKNF 323
>UNIPROTKB|Q6VU69 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0005606 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 UniGene:Hs.436367 DNASU:3909
GeneID:3909 KEGG:hsa:3909 CTD:3909 HGNC:HGNC:6483 PharmGKB:PA30272
KO:K06240 ChiTaRS:LAMA3 GenomeRNAi:3909 NextBio:15345
HOVERGEN:HBG100777 EMBL:AY327114 IPI:IPI00895830
RefSeq:NP_001121190.1 ProteinModelPortal:Q6VU69 STRING:Q6VU69
PRIDE:Q6VU69 Ensembl:ENST00000587184 UCSC:uc002kut.4
ArrayExpress:Q6VU69 Bgee:Q6VU69 Uniprot:Q6VU69
Length = 1668
Score = 214 (80.4 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 46/132 (34%), Positives = 64/132 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SN+C + G G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 78 CNCNGHSNQC--------QDG-SGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCP 128
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 129 HTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 187
Query: 114 NTPNCDSVKGQC 125
+ C + G C
Sbjct: 188 S---CHPLTGDC 196
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 47/156 (30%), Positives = 65/156 (41%)
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW-DLR 159
C C CN G ++ C G C + Q ++ G H E R Q + + GN + R
Sbjct: 75 CVPCNCN--G---HSNQCQDGSGICVNCQHNTAGE-HCE-RCQ--EGY--YGNAVHGSCR 123
Query: 160 RCKRDTYPLGHGGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKS 212
C P H S C G RC CK G TG +C+RC ++ FG C+
Sbjct: 124 AC-----PCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQP 177
Query: 213 CECNPAGSVKNTPNCDSVKGQC---ECKDNVEGAQC 245
C CN G + + C + G C E KD+ +C
Sbjct: 178 CSCNSNGQLGS---CHPLTGDCINQEPKDSSPAEEC 210
>UNIPROTKB|B0YJ33 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0005606 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 IPI:IPI00790908 RefSeq:NP_000218.2
UniGene:Hs.436367 DNASU:3909 GeneID:3909 KEGG:hsa:3909 CTD:3909
HGNC:HGNC:6483 PharmGKB:PA30272 KO:K06240 ChiTaRS:LAMA3
GenomeRNAi:3909 NextBio:15345 HOGENOM:HOG000048708 EMBL:EF444992
STRING:B0YJ33 Ensembl:ENST00000269217 UCSC:uc002kus.4
HOVERGEN:HBG100777 Uniprot:B0YJ33
Length = 1724
Score = 214 (80.4 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 46/132 (34%), Positives = 64/132 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
CNCNG SN+C + G G C++CQ + G +CE+C++ YY + C AC C
Sbjct: 78 CNCNGHSNQC--------QDG-SGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCP 128
Query: 61 PIGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPAGSVK 113
S C G RC CK G TG +C+RC ++ FG C+ C CN G +
Sbjct: 129 HTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSNGQLG 187
Query: 114 NTPNCDSVKGQC 125
+ C + G C
Sbjct: 188 S---CHPLTGDC 196
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 47/156 (30%), Positives = 65/156 (41%)
Query: 101 CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW-DLR 159
C C CN G ++ C G C + Q ++ G H E R Q + + GN + R
Sbjct: 75 CVPCNCN--G---HSNQCQDGSGICVNCQHNTAGE-HCE-RCQ--EGY--YGNAVHGSCR 123
Query: 160 RCKRDTYPLGHGGSLNLQCNSEG---RCQCKPGVTGDKCDRCDVNHYD----FGEAGCKS 212
C P H S C G RC CK G TG +C+RC ++ FG C+
Sbjct: 124 AC-----PCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQP 177
Query: 213 CECNPAGSVKNTPNCDSVKGQC---ECKDNVEGAQC 245
C CN G + + C + G C E KD+ +C
Sbjct: 178 CSCNSNGQLGS---CHPLTGDCINQEPKDSSPAEEC 210
>UNIPROTKB|P31696 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007171 "activation of transmembrane receptor protein tyrosine
kinase activity" evidence=IDA] [GO:0035374 "chondroitin sulfate
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045202 "synapse" evidence=ISS] [GO:0045887 "positive
regulation of synaptic growth at neuromuscular junction"
evidence=ISS] [GO:0043236 "laminin binding" evidence=IDA]
[GO:0032321 "positive regulation of Rho GTPase activity"
evidence=ISS] [GO:0051491 "positive regulation of filopodium
assembly" evidence=ISS] [GO:0033691 "sialic acid binding"
evidence=IDA] [GO:0043395 "heparan sulfate proteoglycan binding"
evidence=IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0002162
"dystroglycan binding" evidence=IDA] [GO:0043113 "receptor
clustering" evidence=ISS;IDA] [GO:0030548 "acetylcholine receptor
regulator activity" evidence=IDA] [GO:0030297 "transmembrane
receptor protein tyrosine kinase activator activity" evidence=IDA]
[GO:0005605 "basal lamina" evidence=ISS] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 PROSITE:PS50026 PROSITE:PS51121 PROSITE:PS51465
SMART:SM00181 SMART:SM00280 InterPro:IPR000152 GO:GO:0007275
GO:GO:0005615 GO:GO:0009986 GO:GO:0030154 GO:GO:0043525
GO:GO:0045887 GO:GO:0045944 GO:GO:0007009 GO:GO:0008201
GO:GO:0045202 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043236 GO:GO:0043113
GO:GO:0007213 PROSITE:PS01186 GO:GO:0033691 GO:GO:0002162
EMBL:U35613 EMBL:M94271 EMBL:M97371 EMBL:M97372 EMBL:U07271
IPI:IPI00579891 IPI:IPI00590466 IPI:IPI00592771 IPI:IPI00597536
IPI:IPI00603573 IPI:IPI00786263 PIR:JH0591 RefSeq:NP_990858.1
UniGene:Gga.4448 UniGene:Gga.48948 PDB:1JB3 PDB:1JC7 PDB:1PXU
PDB:1PZ7 PDB:1PZ8 PDB:1PZ9 PDB:1Q56 PDB:3I70 PDBsum:1JB3
PDBsum:1JC7 PDBsum:1PXU PDBsum:1PZ7 PDBsum:1PZ8 PDBsum:1PZ9
PDBsum:1Q56 PDBsum:3I70 ProteinModelPortal:P31696 SMR:P31696
IntAct:P31696 STRING:P31696 PRIDE:P31696 GeneID:396538
KEGG:gga:396538 CTD:375790 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 OrthoDB:EOG4HQDHD
EvolutionaryTrace:P31696 NextBio:20816574 GO:GO:0030548
GO:GO:0035374 GO:GO:0043395 GO:GO:0030297 GO:GO:0051491
GO:GO:2000541 GO:GO:0032321 GO:GO:0032314 InterPro:IPR002049
InterPro:IPR003645 InterPro:IPR001791 InterPro:IPR000082
InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
SUPFAM:SSF50242 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 Uniprot:P31696
Length = 2081
Score = 179 (68.1 bits), Expect = 8.4e-16, Sum P(3) = 8.4e-16
Identities = 37/95 (38%), Positives = 52/95 (54%)
Query: 41 CRDNYYQKSGDNF--C-TACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 96
C DN G C + C CNP GS C+ + G+C CKPGV G KCDRC+ ++F
Sbjct: 774 CPDNMTLALGVGAAGCPSTCQCNPYGSYGGTCDPATGQCSCKPGVGGLKCDRCEPGFWNF 833
Query: 97 ------GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
++GC C C+P GSV++ +C+ + G C
Sbjct: 834 RGIVTDSKSGCTPCNCDPVGSVRD--DCEQMTGLC 866
Score = 177 (67.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 172 GSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF------GEAGCKSCECNPAGSVKNT 224
GS C+ + G+C CKPGV G KCDRC+ ++F ++GC C C+P GSV++
Sbjct: 799 GSYGGTCDPATGQCSCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRD- 857
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
+C+ + G C CK + G +C
Sbjct: 858 -DCEQMTGLCSCKTGITGMKC 877
Score = 160 (61.4 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 40/127 (31%), Positives = 57/127 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSG-----DNFCTACNCNPIGSLNLQCNS-EGRCQC 77
G C C+ G C++C ++ G + CT CNC+P+GS+ C G C C
Sbjct: 810 GQC-SCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRDDCEQMTGLCSC 868
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGC-------KSCE---CNPAGS---VKNTPNCDSVKGQ 124
K G+TG KC++C N G AGC KSCE C + V +C+
Sbjct: 869 KTGITGMKCNQCP-NGSKMGMAGCEKDPSAPKSCEEMSCEFGATCVEVNGFAHCECPSPL 927
Query: 125 CESAQLS 131
C A ++
Sbjct: 928 CSEANMT 934
Score = 138 (53.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 49/149 (32%), Positives = 60/149 (40%)
Query: 97 GEAGCKS-CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP-AGNR 154
G AGC S C+CNP GS T CD GQC G + + NF +
Sbjct: 785 GAAGCPSTCQCNPYGSYGGT--CDPATGQCSCKP--GVGGLKCDRCEPGFWNFRGIVTDS 840
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
C D P+G S+ C G C CK G+TG KC++C N G AGC+
Sbjct: 841 KSGCTPCNCD--PVG---SVRDDCEQMTGLCSCKTGITGMKCNQCP-NGSKMGMAGCEKD 894
Query: 214 ECNPAG----SVKNTPNCDSVKG--QCEC 236
P S + C V G CEC
Sbjct: 895 PSAPKSCEEMSCEFGATCVEVNGFAHCEC 923
Score = 61 (26.5 bits), Expect = 8.4e-16, Sum P(3) = 8.4e-16
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 159 RRCKRDTYPLGHGGSLNLQCNSEGR---CQCKPGVTGDKCDR 197
R C D++P HGG+ C +GR C+C G G C++
Sbjct: 1349 RPC--DSHPCLHGGT----CEDDGREFTCRCPAGKGGAVCEK 1384
Score = 51 (23.0 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
C + P +GG+ + + S C C+ G +G C++
Sbjct: 1836 CTQKPNPCQNGGTCSPRLESY-ECACQRGFSGAHCEK 1871
Score = 50 (22.7 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 22/69 (31%), Positives = 27/69 (39%)
Query: 68 QCNSEGRCQC-KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
QCN + R + G G K D C FG +S + AG V P S G E
Sbjct: 229 QCNQQRRIKVISKGPCGSK-DPCAEVTCSFGSTCVRSADGQTAGCV--CPA--SCSGVAE 283
Query: 127 SAQLSSRGR 135
S S G+
Sbjct: 284 SIVCGSDGK 292
Score = 46 (21.3 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
P HG S +++ C+C TG C
Sbjct: 1572 PCHHGASCHVKEAEMFHCECLHSYTGPTC 1600
Score = 45 (20.9 bits), Expect = 8.4e-16, Sum P(3) = 8.4e-16
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GE G C NP + ++ CEC + G C
Sbjct: 1561 GECGNDPCHPNPCHHGASCHVKEAEMFHCECLHSYTGPTC 1600
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 24 GHCLD-C----QGDRDGPNCEKCRDNYY-----QKSGDNFCTACN--C-----NPI-GSL 65
G C D C G DG CE+ R +Y + + D+ C C+ C +P+ GS
Sbjct: 664 GPCEDECGSGGSGSGDGSECEQDRCRHYGGWWDEDAEDDRCV-CDFTCLAVPRSPVCGSD 722
Query: 66 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
++ +E C+ K +C++ N Y + C++ P
Sbjct: 723 DVTYANE--CELKK----TRCEKRQ-NLYVTSQGACRALTTTP 758
Score = 39 (18.8 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C G+ +P +S +C C+ GA C
Sbjct: 1843 CQNGGTC--SPRLESY--ECACQRGFSGAHC 1869
Score = 37 (18.1 bits), Expect = 9.6e-13, Sum P(3) = 9.6e-13
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 184 CQCKPGVTGDKCDR 197
C C G G+ C+R
Sbjct: 1628 CACPMGREGEFCER 1641
>FB|FBgn0015773 [details] [associations]
symbol:NetA "Netrin-A" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0007411
"axon guidance" evidence=IGI;ISS;NAS] [GO:0070983 "dendrite
guidance" evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 eggNOG:NOG244580
GeneTree:ENSGT00700000104042 EMBL:U60316 EMBL:U63736 EMBL:AY089580
RefSeq:NP_001245667.1 RefSeq:NP_511154.3 UniGene:Dm.2915
ProteinModelPortal:Q24567 SMR:Q24567 IntAct:Q24567 MINT:MINT-285237
STRING:Q24567 EnsemblMetazoa:FBtr0073942 GeneID:32398
KEGG:dme:Dmel_CG18657 CTD:32398 FlyBase:FBgn0015773
InParanoid:Q24567 OMA:AIMAKVI OrthoDB:EOG470RZN PhylomeDB:Q24567
GenomeRNAi:32398 NextBio:778263 Bgee:Q24567 GermOnline:CG18657
GO:GO:2000289 Uniprot:Q24567
Length = 726
Score = 207 (77.9 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 39/97 (40%), Positives = 57/97 (58%)
Query: 1 CNCNGFSNRCFFDKELYNRT-G-HGGHCLDCQGDRDGPNCEKCRDNYYQKSGD-----NF 53
CNCN + +C F+ E++ + G GG C +C+ G NC +C++ +Y+ +
Sbjct: 369 CNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKV 428
Query: 54 CTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRC 89
C AC+C+PIGS CNS G+C CK GVTG C+RC
Sbjct: 429 CKACDCHPIGSSGKICNSTSGQCPCKDGVTGLTCNRC 465
Score = 154 (59.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 49/161 (30%), Positives = 71/161 (44%)
Query: 57 CNCNPIGS-LNLQCNSEGRCQCKPGVTGDKCDRCDVNHYD-------FGEAG-CKSCECN 107
C CN S + + + C+C G C+RC H+D EA CK C CN
Sbjct: 313 CKCNGHASKCSTDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEANECKECNCN 372
Query: 108 PAG-----SVKNTPNCDSVKGQ-CESAQLSSRGR-VHTELRVQSRKNFDPAGNRIWDLRR 160
+++ V G C++ + S+ GR H Q ++ F + R+
Sbjct: 373 KHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCH-----QCKEGFYRDATKPLTHRK 427
Query: 161 -CKR-DTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDRC 198
CK D +P+G G + CNS G+C CK GVTG C+RC
Sbjct: 428 VCKACDCHPIGSSGKI---CNSTSGQCPCKDGVTGLTCNRC 465
Score = 140 (54.3 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 44/148 (29%), Positives = 65/148 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK-------SGDNF 53
C CNG +++C D +G +C +C + G +CE+C+ ++ + N
Sbjct: 313 CKCNGHASKCSTDA-----SGQL-NC-ECSHNTAGRDCERCKPFHFDRPWARATAKEANE 365
Query: 54 CTACNCNPIGS---LNL------QCNSEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA--- 99
C CNCN N+ Q S G CQ C+ TG C +C Y D +
Sbjct: 366 CKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTH 425
Query: 100 --GCKSCECNPAGSVKNTPNCDSVKGQC 125
CK+C+C+P GS C+S GQC
Sbjct: 426 RKVCKACDCHPIGSSGKI--CNSTSGQC 451
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 29/73 (39%), Positives = 36/73 (49%)
Query: 180 SEGRCQ-CKPGVTGDKCDRCDVNHY-DFGEA-----GCKSCECNPAGSVKNTPNCDSVKG 232
S G CQ C+ TG C +C Y D + CK+C+C+P GS C+S G
Sbjct: 392 SGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGSSGKI--CNSTSG 449
Query: 233 QCECKDNVEGAQC 245
QC CKD V G C
Sbjct: 450 QCPCKDGVTGLTC 462
>UNIPROTKB|F1LXY9 [details] [associations]
symbol:Lama2 "Protein Lama2" species:10116 "Rattus
norvegicus" [GO:0005605 "basal lamina" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] RGD:1308889 GO:GO:0007411 GO:GO:0042383
GO:GO:0005605 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
IPI:IPI00781912 Ensembl:ENSRNOT00000061512 ArrayExpress:F1LXY9
Uniprot:F1LXY9
Length = 661
Score = 203 (76.5 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 47/140 (33%), Positives = 68/140 (48%)
Query: 1 CNCNGFSNRCFFDKELYNRT------GH---GGHCLDCQGDRDGPNCEKCRDNYYQKSG- 50
CNC+G + C++D+ + +R G GG C++C + G NCE C D +++ G
Sbjct: 306 CNCHGKAEECYYDETVASRNLSLNIHGKYIGGGVCINCTHNTAGINCETCIDGFFRPKGV 365
Query: 51 -DNF---CTACNCNPIGSLNLQCNSE----------GRCQCKPGVTGDKCDRCDVNHYDF 96
++ C C+C+P GSL+ C + G C CKPG G CDRC V Y
Sbjct: 366 SPSYPRPCQPCHCDPAGSLSEVCIKDEKHTRRGLKPGSCYCKPGFGGMNCDRC-VRGYR- 423
Query: 97 GEAGCKSCECNPAGSVKNTP 116
G C+ C C+ GS P
Sbjct: 424 GYPDCQPCNCSGLGSTNQDP 443
Score = 144 (55.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 30/64 (46%), Positives = 33/64 (51%)
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
G C CKPG G CDRC V Y G C+ C C+ GS P C G C CK+NVE
Sbjct: 402 GSCYCKPGFGGMNCDRC-VRGYR-GYPDCQPCNCSGLGSTNQDP-CI---GPCSCKENVE 455
Query: 242 GAQC 245
G C
Sbjct: 456 GEDC 459
>WB|WBGene00013416 [details] [associations]
symbol:Y64G10A.7 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:AL110498
EMBL:AL117206 GeneID:178377 KEGG:cel:CELE_Y64G10A.7 CTD:178377
RefSeq:NP_001255802.1 ProteinModelPortal:G5EFX3 SMR:G5EFX3
EnsemblMetazoa:Y64G10A.7b WormBase:Y64G10A.7b OMA:RIEMEVI
Uniprot:G5EFX3
Length = 1714
Score = 208 (78.3 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 72/249 (28%), Positives = 101/249 (40%)
Query: 24 GHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G C DC G NCE +C + + G N C C G +CN E G C+C G
Sbjct: 1161 GFC-DCPSGFMGKNCESECPEGLW---GSNCMKHCLCMHGG----ECNKENGDCECIDGW 1212
Query: 82 TGDKCD-RCDVNHYDFGEAGCKSCEC-NPAGSVKNTPNCDSVKG----QCESAQLSSRGR 135
TG C+ C FG + C C N A + T C+ + G CE + +S
Sbjct: 1213 TGPSCEFLCPFGQ--FGRNCAQRCNCKNGASCDRKTGRCECLPGWSGEHCEKSCVSGHYG 1270
Query: 136 VHTELRVQSRKNF--DPAGNRI-----WDLRRCKRDTYP--LGHGGSLNLQC-NSE---- 181
E + DP W ++C R G S + +C NS+
Sbjct: 1271 AKCEETCECENGALCDPISGHCSCQPGWRGKKCNRPCLKGYFGRHCSQSCRCANSKSCDH 1330
Query: 182 --GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
GRCQC G G C + C FGE+ + C+C +N+ CD++ G+C CK
Sbjct: 1331 ISGRCQCPKGYAGHSCTELCPDG--TFGESCSQKCDCG-----ENSM-CDAISGKCFCKP 1382
Query: 239 NVEGAQCRS 247
G+ C+S
Sbjct: 1383 GHSGSDCKS 1391
Score = 196 (74.1 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 71/251 (28%), Positives = 101/251 (40%)
Query: 24 GHCLD-CQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQ--CNS-EGRCQCK 78
G C C G C++ C Y+ G + C+C + S + C+ G C C
Sbjct: 842 GDCTKKCPAGYQGNLCDQPCPAGYF---GYDCEQKCSCADVASPHKSKVCHHVTGTCTCL 898
Query: 79 PGVTGDKCDR-CDVNHYDFGEAGCKSCEC-NPAGSVKNTPNCDSVKG--QCESAQLSSRG 134
PG TG CD+ C N Y G +C C N A ++ +C G +++ G
Sbjct: 899 PGKTGPLCDQSCAPNTY--GPNCAHTCSCVNGAKCDESDGSCHCTPGFYGATCSEVCPTG 956
Query: 135 RVHTEL----RVQSRKNFDPAGNRI-----WDLRRCKRDTYPLGHGGSLNLQCN------ 179
R + + Q+ D + W ++C + P G + +C+
Sbjct: 957 RFGIDCMQLCKCQNGAICDTSNGSCECAPGWSGKKCDKACAPGTFGKDCSKKCDCADGMH 1016
Query: 180 ---SEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQC 234
S+G C C PG G KCD CD FG AGCK C C +N CDSV G C
Sbjct: 1017 CDPSDGECICPPGKKGHKCDETCDSGL--FG-AGCKGICSC------QNGATCDSVTGSC 1067
Query: 235 ECKDNVEGAQC 245
EC+ G +C
Sbjct: 1068 ECRPGWRGKKC 1078
Score = 168 (64.2 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 74/260 (28%), Positives = 99/260 (38%)
Query: 22 HGGHCLDCQGDRD------GPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGR 74
HGG C GD + GP+CE C + + G N CNC S + GR
Sbjct: 1195 HGGECNKENGDCECIDGWTGPSCEFLCP---FGQFGRNCAQRCNCKNGASCD---RKTGR 1248
Query: 75 CQCKPGVTGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCESAQLSS 132
C+C PG +G+ C++ C HY A C+ +CEC +N CD + G C S Q
Sbjct: 1249 CECLPGWSGEHCEKSCVSGHYG---AKCEETCEC------ENGALCDPISGHC-SCQPGW 1298
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-GGSLNLQCNSEGR-CQ--CKP 188
RG+ + K + G RC ++ H G G C C
Sbjct: 1299 RGK---KCNRPCLKGY--FGRHCSQSCRCA-NSKSCDHISGRCQCPKGYAGHSCTELCPD 1352
Query: 189 GVTGDKCD-RCDVNHYDF------------GEAG--CKS-C-------ECNPAGSVKNTP 225
G G+ C +CD G +G CKS C +CN S +N
Sbjct: 1353 GTFGESCSQKCDCGENSMCDAISGKCFCKPGHSGSDCKSGCVQGRFGPDCNQLCSCENGG 1412
Query: 226 NCDSVKGQCECKDNVEGAQC 245
CDS G C C G +C
Sbjct: 1413 VCDSSTGSCVCPPGYIGTKC 1432
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 73/244 (29%), Positives = 97/244 (39%)
Query: 23 GGHC-LDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS---EGR--CQ 76
G C + CQ DR GP CEK + + D C C P G + CN EGR
Sbjct: 1429 GTKCEIACQSDRFGPTCEKICNCENGGTCDRLTGQCRCLP-GFTGMTCNQVCPEGRFGAG 1487
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCK--------SCECN-PAGS--VKNTPNCDSV-KGQ 124
CK +KC RC H + CK SCE + P+G + T +C+ + +
Sbjct: 1488 CK-----EKC-RCANGHCNASSGECKCNLGFTGPSCEQSCPSGKYGLNCTLDCECYGQAR 1541
Query: 125 CESAQLSSRGRVHTEL-RVQSRKNFD-PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG 182
C+ Q G R SR F P G W C + +G + ++G
Sbjct: 1542 CDPVQ----GCCDCPPGRYGSRCQFSCPNGFYGW---YCSQSC-SCQNGAHCD---GADG 1590
Query: 183 RCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
RC C G GDKC+ +C FG A + C C G K CD+ G+C C
Sbjct: 1591 RCLCPAGFQGDKCEQKCSEG--SFGPACSQQCNC---GKYK----CDATDGKCICPVGRH 1641
Query: 242 GAQC 245
G C
Sbjct: 1642 GPLC 1645
Score = 162 (62.1 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 68/247 (27%), Positives = 96/247 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACN---CNPI-GSLNLQCNSEGR-CQ- 76
G C C + GP C++ C N Y + + C+ N C+ GS + G C
Sbjct: 893 GTCT-CLPGKTGPLCDQSCAPNTYGPNCAHTCSCVNGAKCDESDGSCHCTPGFYGATCSE 951
Query: 77 -CKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPN-C-DSVKGQCESAQLSS 132
C G G C + C + + SCEC P S K C G+ S +
Sbjct: 952 VCPTGRFGIDCMQLCKCQNGAICDTSNGSCECAPGWSGKKCDKACAPGTFGKDCSKKCDC 1011
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDL-RRCKRDTYPLGHGGSLNLQ----CNS-EGRCQC 186
+H + + P G + C + G G + Q C+S G C+C
Sbjct: 1012 ADGMHCD--PSDGECICPPGKKGHKCDETCDSGLFGAGCKGICSCQNGATCDSVTGSCEC 1069
Query: 187 KPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAG--SVKN--TPNCDSVKGQCECKDNV 240
+PG G KCDR C FGE GC + C+C S+ N CD V G+C C
Sbjct: 1070 RPGWRGKKCDRPCPDGR--FGE-GCNAICDCTTTNDTSMYNPFVARCDHVTGECRCPAGW 1126
Query: 241 EGAQCRS 247
G C++
Sbjct: 1127 TGPDCQT 1133
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 69/249 (27%), Positives = 98/249 (39%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C C G +C E C D + G++ C+C N C++ G+C CKPG
Sbjct: 1333 GRC-QCPKGYAGHSCTELCPDGTF---GESCSQKCDCGE----NSMCDAISGKCFCKPGH 1384
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSV-KNTPNCDSVKG----QCESAQLSSRGRV 136
+G C V FG + C C G +T +C G +CE A S R
Sbjct: 1385 SGSDCKSGCVQGR-FGPDCNQLCSCENGGVCDSSTGSCVCPPGYIGTKCEIACQSDRFGP 1443
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCK--------RDTYPLGHGGS--------LNLQCN- 179
E ++ + +N +R+ RC P G G+ N CN
Sbjct: 1444 TCE-KICNCENGGTC-DRLTGQCRCLPGFTGMTCNQVCPEGRFGAGCKEKCRCANGHCNA 1501
Query: 180 SEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCECK 237
S G C+C G TG C++ C Y C CEC G + CD V+G C+C
Sbjct: 1502 SSGECKCNLGFTGPSCEQSCPSGKYGLN---CTLDCECY--GQAR----CDPVQGCCDCP 1552
Query: 238 DNVEGAQCR 246
G++C+
Sbjct: 1553 PGRYGSRCQ 1561
Score = 156 (60.0 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 79/280 (28%), Positives = 108/280 (38%)
Query: 1 CNC-NGFSNRCF-FDKELYNRTG-HGGHCLD-CQGDRDGPNCE---KCRDNYYQKSGDNF 53
C+C NG +C D + G +G C + C R G +C KC++ + +
Sbjct: 923 CSCVNGA--KCDESDGSCHCTPGFYGATCSEVCPTGRFGIDCMQLCKCQNGAICDTSNG- 979
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGD----KCDRCDVNHYD--FGEAGC------ 101
+C C P G +C+ C PG G KCD D H D GE C
Sbjct: 980 --SCECAP-GWSGKKCDKA----CAPGTFGKDCSKKCDCADGMHCDPSDGECICPPGKKG 1032
Query: 102 ----KSCE-------CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
++C+ C S +N CDSV G CE + RG+ R F
Sbjct: 1033 HKCDETCDSGLFGAGCKGICSCQNGATCDSVTGSCE-CRPGWRGKKCDRPCPDGR--FGE 1089
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEA 208
N I D C T +C+ G C+C G TG C C + + GE
Sbjct: 1090 GCNAICD---CTT-TNDTSMYNPFVARCDHVTGECRCPAGWTGPDCQTSCPLGRH--GE- 1142
Query: 209 GCK-SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
GC+ SC+C+ N +CD V G C+C G C S
Sbjct: 1143 GCRHSCQCS------NGASCDRVTGFCDCPSGFMGKNCES 1176
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 62/245 (25%), Positives = 94/245 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C C+ G +C+ C + G + C+C G + +S G C C PG
Sbjct: 1376 GKCF-CKPGHSGSDCKSGCVQGRF---GPDCNQLCSCENGGVCD---SSTGSCVCPPGYI 1428
Query: 83 GDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKN-TPNCDSVKGQCESA--QLSSRGRVHT 138
G KC+ C + FG K C C G+ T C + G Q+ GR
Sbjct: 1429 GTKCEIACQSDR--FGPTCEKICNCENGGTCDRLTGQCRCLPGFTGMTCNQVCPEGRFGA 1486
Query: 139 ELRVQSR-KNFD---PAGNRIWDLR----RCKRDTYPLGHGG---SLNLQCNSEGRCQ-- 185
+ + R N +G +L C++ P G G +L+ +C + RC
Sbjct: 1487 GCKEKCRCANGHCNASSGECKCNLGFTGPSCEQSC-PSGKYGLNCTLDCECYGQARCDPV 1545
Query: 186 -----CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
C PG G +C N + +G +SC C +N +CD G+C C
Sbjct: 1546 QGCCDCPPGRYGSRCQFSCPNGF-YGWYCSQSCSC------QNGAHCDGADGRCLCPAGF 1598
Query: 241 EGAQC 245
+G +C
Sbjct: 1599 QGDKC 1603
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 49/173 (28%), Positives = 76/173 (43%)
Query: 98 EAGCKSCE----CNPAGSVKNTPNCDSVKG----QCESAQLSSRGRVHTELRVQ-SRKNF 148
+ C C+ C+ GS + CD G +CE Q+ G + + S K
Sbjct: 651 QLSCSDCQNGGKCSMRGSGLLS-KCDCPSGYTGEKCE--QICRNGYWGVDCAHKCSCKLC 707
Query: 149 DPA-GN-RIWDLRRCKRDTYPLG-HGGSLNLQCNSE---GRCQ-------CKPGVTGDKC 195
DP+ G+ R D +C P G +G NL+C + GRC C G+ G C
Sbjct: 708 DPSTGSCRCEDPEKCSDGPCPDGFYGSQCNLKCRMDCPNGRCDPVFGYCTCPDGLYGQSC 767
Query: 196 DR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
++ C H+ FG+ C+ C+C + +N+ CD + G+C CK G C+
Sbjct: 768 EKPCP--HFTFGK-NCRFPCKC----ARENSEGCDEITGKCRCKPGYYGHHCK 813
Score = 128 (50.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 65/251 (25%), Positives = 94/251 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
G C C G C + C + + G C C N CN S G C+C G
Sbjct: 1462 GQCR-CLPGFTGMTCNQVCPEGRF---GAGCKEKCRC-----ANGHCNASSGECKCNLGF 1512
Query: 82 TGDKCDR-CDVNHYD---------FGEAGCKS----CECNPA--GSVKNTPNC-DSVKGQ 124
TG C++ C Y +G+A C C+C P GS + +C + G
Sbjct: 1513 TGPSCEQSCPSGKYGLNCTLDCECYGQARCDPVQGCCDCPPGRYGS-RCQFSCPNGFYGW 1571
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN----- 179
S S + H + R PAG + D +C++ G + + QCN
Sbjct: 1572 YCSQSCSCQNGAHCD-GADGRC-LCPAGFQ-GD--KCEQKCSEGSFGPACSQQCNCGKYK 1626
Query: 180 ---SEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
++G+C C G G C+ C Y G++ C+C N CD+ GQC
Sbjct: 1627 CDATDGKCICPVGRHGPLCEEECRPGRY--GQSCQNKCQCF------NGATCDARTGQCS 1678
Query: 236 CKDNVEGAQCR 246
C G C+
Sbjct: 1679 CSPGWLGPTCQ 1689
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 67/247 (27%), Positives = 88/247 (35%)
Query: 21 GHGGHCLDCQGDRDGPNCE-KCRD--NYYQKS--GDNFCTACNCNPIGSLNLQCNSEGRC 75
G H +C G C+ C D N + S G + C+C P G +C
Sbjct: 633 GRRRHVKECPNGFFGSTCQLSCSDCQNGGKCSMRGSGLLSKCDC-PSGYTGEKCEQI--- 688
Query: 76 QCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG-QCESAQLSSR 133
C+ G G C +C D G SC C + P D G QC L R
Sbjct: 689 -CRNGYWGVDCAHKCSCKLCD-PSTG--SCRCEDPEKCSDGPCPDGFYGSQCN---LKCR 741
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC-----NSEG------ 182
R + + ++ + C++ G + C NSEG
Sbjct: 742 MDCPNG-RCDPVFGYCTCPDGLYG-QSCEKPCPHFTFGKNCRFPCKCARENSEGCDEITG 799
Query: 183 RCQCKPGVTGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQC--ECKD 238
+C+CKPG G C R C FG AGC C C PAG CD V G C +C
Sbjct: 800 KCRCKPGYYGHHCKRMCSPGL--FG-AGCAMKCSC-PAGI-----RCDPVTGDCTKKCPA 850
Query: 239 NVEGAQC 245
+G C
Sbjct: 851 GYQGNLC 857
>UNIPROTKB|E5RFQ2 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] GO:GO:0050873 GO:GO:0005605
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0001568 EMBL:Z99289 EMBL:AL590106
HGNC:HGNC:6484 ChiTaRS:LAMA4 IPI:IPI00983822
ProteinModelPortal:E5RFQ2 SMR:E5RFQ2 Ensembl:ENST00000521398
ArrayExpress:E5RFQ2 Bgee:E5RFQ2 Uniprot:E5RFQ2
Length = 331
Score = 189 (71.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 51/149 (34%), Positives = 65/149 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C+CNG SN C G G+C+ CQ + G +CEKC D Y S FC C
Sbjct: 82 CDCNGNSNECL--------DG-SGYCVHCQRNTTGEHCEKCLDGYIGDSIRGAPQFCQPC 132
Query: 58 NCNPIGSL-NL--QC---NSEGRCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECN 107
C P+ L N C N RC C G C+RC +Y G CK C+C+
Sbjct: 133 PC-PLPHLANFAESCYRKNGAVRCICNENYAGPNCERCAPGYYGNPLLIGST-CKKCDCS 190
Query: 108 PAGSVKNT--PNCDSVKGQCESAQLSSRG 134
S N +CD V GQC + ++ G
Sbjct: 191 -GNSDPNLIFEDCDEVTGQCRNCLRNTTG 218
Score = 149 (57.5 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 60/213 (28%), Positives = 93/213 (43%)
Query: 36 PNCEKCRDNYYQK-SGDNFCTACNCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNH 93
P EKC ++ SG+ C C+CN G+ N + G C C+ TG+ C++C ++
Sbjct: 62 PAAEKCNAGFFHTLSGE--CVPCDCN--GNSNECLDGSGYCVHCQRNTTGEHCEKC-LDG 116
Query: 94 YDFGEA--G----CKSCECNPAGSVKN-TPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
Y G++ G C+ C C P + N +C G + + E +
Sbjct: 117 Y-IGDSIRGAPQFCQPCPC-PLPHLANFAESCYRKNGAVRCICNENYAGPNCE---RCAP 171
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ-CNS-EGRCQ-CKPGVTGDKCDRCDVNHY 203
+ GN + CK+ +L + C+ G+C+ C TG KC+RC +Y
Sbjct: 172 GY--YGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYY 229
Query: 204 DFGEAG-CKSCE-CNPAGSVKNTPNCDSVKGQC 234
G+A K+C CN G P CDSV G+C
Sbjct: 230 --GDARIAKNCAVCNCGGG----P-CDSVTGEC 255
>MGI|MGI:87961 [details] [associations]
symbol:Agrn "agrin" species:10090 "Mus musculus" [GO:0001932
"regulation of protein phosphorylation" evidence=ISO] [GO:0001934
"positive regulation of protein phosphorylation" evidence=IDA]
[GO:0002162 "dystroglycan binding" evidence=ISO] [GO:0005509
"calcium ion binding" evidence=ISO] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005615 "extracellular space" evidence=IDA;TAS] [GO:0007009
"plasma membrane organization" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=ISO;IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007416 "synapse
assembly" evidence=ISO] [GO:0007528 "neuromuscular junction
development" evidence=IGI] [GO:0008582 "regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] [GO:0010469 "regulation of receptor
activity" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030548 "acetylcholine receptor regulator
activity" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0032314 "regulation of Rac GTPase activity"
evidence=IDA] [GO:0032321 "positive regulation of Rho GTPase
activity" evidence=ISO] [GO:0043113 "receptor clustering"
evidence=IGI;ISO;IMP;IDA] [GO:0043525 "positive regulation of
neuron apoptotic process" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045213 "neurotransmitter receptor metabolic
process" evidence=IDA] [GO:0045887 "positive regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=ISO] [GO:2000541 "positive regulation
of protein geranylgeranylation" evidence=IMP] Reactome:REACT_112621
InterPro:IPR000742 InterPro:IPR002350 Pfam:PF00008 Pfam:PF00050
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51465 SMART:SM00181
SMART:SM00280 MGI:MGI:87961 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045887 GO:GO:0045944
GO:GO:0007009 GO:GO:0045202 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0005605
GO:GO:0043113 PROSITE:PS01186 Reactome:REACT_118324 GO:GO:0033691
GO:GO:0002162 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 GO:GO:0030548 GO:GO:0035374 GO:GO:0043395
GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
OMA:TNRWLRV GO:GO:0005796 GO:GO:0045213 GO:GO:0001934
InterPro:IPR011497 EMBL:AL928667 EMBL:BC150703 IPI:IPI00378698
IPI:IPI00648938 IPI:IPI00874558 UniGene:Mm.273098 PDB:3PVE
PDBsum:3PVE ProteinModelPortal:A2ASQ1 SMR:A2ASQ1 STRING:A2ASQ1
PaxDb:A2ASQ1 PRIDE:A2ASQ1 Ensembl:ENSMUST00000071248
Ensembl:ENSMUST00000075787 Ensembl:ENSMUST00000105574
Ensembl:ENSMUST00000105575 UCSC:uc008wgf.1
GeneTree:ENSGT00530000063501 InParanoid:A2ASQ1
Reactome:REACT_115433 ChiTaRS:AGRN EvolutionaryTrace:A2ASQ1
Bgee:A2ASQ1 Genevestigator:A2ASQ1 Uniprot:A2ASQ1
Length = 1950
Score = 180 (68.4 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 41 CRDNYYQKSGDNF--C-TACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF 96
C+DN G C + C+CNP GS + C+ G+C C+PGV G +CDRC+ ++F
Sbjct: 669 CQDNVTAAQGVGLAGCPSTCHCNPHGSYSGTCDPVTGQCSCRPGVGGLRCDRCEPGFWNF 728
Query: 97 ------GEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G +GC C C+P G+V++ +C+ + G C
Sbjct: 729 RGIVTDGHSGCTPCSCDPRGAVRD--DCEQMTGLC 761
Score = 169 (64.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 172 GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDF------GEAGCKSCECNPAGSVKNT 224
GS + C+ G+C C+PGV G +CDRC+ ++F G +GC C C+P G+V++
Sbjct: 694 GSYSGTCDPVTGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTPCSCDPRGAVRD- 752
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
+C+ + G C C+ V G +C
Sbjct: 753 -DCEQMTGLCSCRPGVAGPKC 772
Score = 144 (55.7 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNFCTACNCNPIGSLNLQCNS-EGRCQC 77
G C C+ G C++C ++ G + CT C+C+P G++ C G C C
Sbjct: 705 GQC-SCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTPCSCDPRGAVRDDCEQMTGLCSC 763
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
+PGV G KC +C + G GC++ P V+
Sbjct: 764 RPGVAGPKCGQCP-DGQALGHLGCEADPTTPVTCVE 798
Score = 52 (23.4 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 164 DTYPLGHGGSLNLQCNSEG-RCQCKPGVTGDKCDR 197
D+ P HGG+ + +G C C G G C++
Sbjct: 1216 DSQPCLHGGTCQDLDSGKGFSCSCTAGRAGTVCEK 1250
Score = 52 (23.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 170 HGGSLNLQCNSEG--RCQCKPGVTGDKC 195
HGG+L Q G CQC PG G C
Sbjct: 1441 HGGAL-CQALEAGVFLCQCPPGRFGPTC 1467
Score = 37 (18.1 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
P +GGS + + C C G +G C++
Sbjct: 1711 PCLNGGSC-IPREATYECLCPGGFSGLHCEK 1740
Score = 36 (17.7 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 12/49 (24%), Positives = 15/49 (30%)
Query: 197 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
R V GE G C NP ++ C+C G C
Sbjct: 1419 RAVVQSSGVGECGDHPCSPNPCHGGALCQALEAGVFLCQCPPGRFGPTC 1467
Score = 36 (17.7 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 102 KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
KSC+ P + DS KG S G V ++++ S
Sbjct: 1213 KSCDSQPCLHGGTCQDLDSGKGFSCSCTAGRAGTVCEKVQLPS 1255
>WB|WBGene00000415 [details] [associations]
symbol:ced-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0043652
"engulfment of apoptotic cell" evidence=IMP] [GO:0043654
"recognition of apoptotic cell" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005044 "scavenger receptor activity"
evidence=ISS;IPI] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0031260 "pseudopodium membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0001891 "phagocytic
cup" evidence=IDA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
GO:GO:0001891 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HSSP:P46531 GO:GO:0043652 GO:GO:0012501
GO:GO:0034620 InterPro:IPR006212 SMART:SM00261 GO:GO:0005044
HOGENOM:HOG000294130 GO:GO:0001845 EMBL:AF332568 EMBL:AL032657
PIR:T26972 RefSeq:NP_001021772.1 RefSeq:NP_001021773.1
RefSeq:NP_001076621.1 RefSeq:NP_740922.1 UniGene:Cel.7093
ProteinModelPortal:Q9XWD6 SMR:Q9XWD6 IntAct:Q9XWD6 MINT:MINT-223151
STRING:Q9XWD6 PaxDb:Q9XWD6 PRIDE:Q9XWD6 EnsemblMetazoa:Y47H9C.4a
GeneID:173064 KEGG:cel:CELE_Y47H9C.4 UCSC:Y47H9C.4a CTD:173064
WormBase:Y47H9C.4a WormBase:Y47H9C.4b WormBase:Y47H9C.4c
WormBase:Y47H9C.4d GeneTree:ENSGT00690000101691 InParanoid:Q9XWD6
OMA:VYNDTEQ NextBio:878121 GO:GO:0031260 GO:GO:0043654
Uniprot:Q9XWD6
Length = 1111
Score = 176 (67.0 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 78/276 (28%), Positives = 112/276 (40%)
Query: 1 CNCNGFSNRCFFDKELYN---RTG-HGGHC-LDCQGDRDGPNCEK---CRDN-YYQKSGD 51
C+C +N C D EL +G G C C ++ GPNC K C++ K G
Sbjct: 164 CDCENGAN-C--DPELGTCICTSGFQGERCEKPCPDNKWGPNCVKSCPCQNGGKCNKEGK 220
Query: 52 NFCTA------C--NCNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCK 102
C+ C C G +C E C C+ G T D + +C + + A C+
Sbjct: 221 CVCSDGWGGEFCLNKCEE-GKFGAECKFE--CNCQNGATCDNTNGKC-ICKSGYHGALCE 276
Query: 103 S-CE-------CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
+ C C N NCDS G+C+ + G+ H ++ SR F
Sbjct: 277 NECSVGFFGSGCTQKCDCLNNQNCDSSSGECKC--IGWTGK-HCDIGC-SRGRFG----- 327
Query: 155 IWDLRRCKRD-TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD--RCDVNHYDFGEAGC 210
+CK++ T P N C+++ G+CQC+ G G KCD +CD Y A C
Sbjct: 328 ----LQCKQNCTCPGLEFSDSNASCDAKTGQCQCESGYKGPKCDERKCDAEQYG---ADC 380
Query: 211 -KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
K+C C ++ PN G C CK G C
Sbjct: 381 SKTCTCVRENTLMCAPNT----GFCRCKPGFYGDNC 412
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 72/251 (28%), Positives = 95/251 (37%)
Query: 24 GHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G C C G NC+ C + Y G C C +N +C+ E G C C+PG
Sbjct: 531 GECT-CPAGLQGANCDIGCPEGSY---GPGCKLHCKC-----VNGKCDKETGECTCQPGF 581
Query: 82 TGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPNCD---SVKG-QCES-AQLSSRG 134
G C C Y GE+ C+ SC C+ A K T C KG C+ ++ G
Sbjct: 582 FGSDCSTTCSKGKY--GES-CELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKCDPNTFG 638
Query: 135 RVHTELRVQSR------KN-----FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN---- 179
+ E S KN P + I C +Y G G C
Sbjct: 639 FLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHNCPAGSY--GDGCQQVCSCADGHG 696
Query: 180 ---SEGRCQCKPGVTGDKC-DRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQC 234
+ G C C+PG G C ++C Y +G A C C +GS CD + G C
Sbjct: 697 CDPTTGECICEPGYHGKTCSEKCPDGKYGYGCALDCPKCA---SGST-----CDHINGLC 748
Query: 235 ECKDNVEGAQC 245
C +EGA C
Sbjct: 749 ICPAGLEGALC 759
Score = 142 (55.0 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 70/266 (26%), Positives = 98/266 (36%)
Query: 2 NCNGFSNRCFFDKELYNRTGHGGHC-LDCQGDRDGPNCEK-CRDNYYQKSGDNF-CTA-- 56
NC+ S C + TG HC + C R G C++ C + S N C A
Sbjct: 299 NCDSSSGEC----KCIGWTGK--HCDIGCSRGRFGLQCKQNCTCPGLEFSDSNASCDAKT 352
Query: 57 --CNCNPIGSLNLQCNSEGRCQCKP-GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C C G +C+ E +C + G K C + C C P
Sbjct: 353 GQCQCES-GYKGPKCD-ERKCDAEQYGADCSKTCTCVRENTLMCAPNTGFCRCKPGFYGD 410
Query: 114 NTP-NC--DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR-CKRDTYPLG 169
N C DS CE + +E ++ G + C D Y G
Sbjct: 411 NCELACSKDSYGPNCEKQAMCDWNHA-SECNPETGSCVCKPGRTGKNCSEPCPLDFY--G 467
Query: 170 HGGSLNLQCN--------SEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGC-KSCECNPAG 219
+ QCN ++G+CQC G TG +C+ C + FG A C K C+C P G
Sbjct: 468 PNCAHQCQCNQRGVGCDGADGKCQCDRGWTGHRCEHHCPAD--TFG-ANCEKRCKC-PKG 523
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
CD + G+C C ++GA C
Sbjct: 524 I-----GCDPITGECTCPAGLQGANC 544
Score = 135 (52.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 44/139 (31%), Positives = 53/139 (38%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPI 62
NG C E G C C G C+K C D YY G + C C
Sbjct: 770 NGCRQVCRCTSEYKQCNAQTGEC-SCPAGFQGDRCDKPCEDGYY---GPDCIKKCKCQ-- 823
Query: 63 GSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
G+ CN G C C PG TG+ C C + FG C S EC P + CD+
Sbjct: 824 GTATSSCNRVSGACHCHPGFTGEFCHALCPES--TFG-LKC-SKEC-PKDGCGDGYECDA 878
Query: 121 VKGQCESAQLSSRGRVHTE 139
G C Q+S G+ E
Sbjct: 879 AIGCCHVDQMSC-GKAKQE 896
Score = 134 (52.2 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 33/89 (37%), Positives = 43/89 (48%)
Query: 39 EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKC-DRCDVNHYDFG 97
++C D YYQ D+FC +CNP +C G+C+C PG G C C V + G
Sbjct: 103 KQCCDGYYQTK-DHFCLP-DCNPPCKKG-KCIEPGKCECDPGYGGKYCASSCSVGTWGLG 159
Query: 98 EAGC-KSCECNPAGSVKNTPNCDSVKGQC 125
C KSC+C +N NCD G C
Sbjct: 160 ---CSKSCDC------ENGANCDPELGTC 179
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 50/175 (28%), Positives = 69/175 (39%)
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSC--ECNPAG-SVKNTPNCDSVKGQCESAQLSSR 133
C P KC D G G K C C+ + + +CD G +L
Sbjct: 121 CNPPCKKGKCIEPGKCECDPGYGG-KYCASSCSVGTWGLGCSKSCDCENGANCDPEL--- 176
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
G Q + P + W C + P +GG +CN EG+C C G G+
Sbjct: 177 GTCICTSGFQGERCEKPCPDNKWG-PNCVKSC-PCQNGG----KCNKEGKCVCSDGWGGE 230
Query: 194 KC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C ++C+ FG A CK ECN +N CD+ G+C CK GA C +
Sbjct: 231 FCLNKCEEGK--FG-AECKF-ECN----CQNGATCDNTNGKCICKSGYHGALCEN 277
Score = 125 (49.1 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 177 QCNSE-GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
QCN++ G C C G GD+CD+ C+ +Y G K C+C G+ T +C+ V G C
Sbjct: 784 QCNAQTGECSCPAGFQGDRCDKPCEDGYY--GPDCIKKCKCQ--GTA--TSSCNRVSGAC 837
Query: 235 ECKDNVEGAQCRS 247
C G C +
Sbjct: 838 HCHPGFTGEFCHA 850
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G C+ C +G C + C ++ G+ C C S QCN++ G C C G
Sbjct: 746 GLCI-CPAGLEGALCTRPCSAGFW---GNGCRQVCRCT---SEYKQCNAQTGECSCPAGF 798
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
GD+CD+ C+ +Y G K C+C G+ T +C+ V G C
Sbjct: 799 QGDRCDKPCEDGYY--GPDCIKKCKCQ--GTA--TSSCNRVSGAC 837
>UNIPROTKB|Q9XWD6 [details] [associations]
symbol:ced-1 "Cell death abnormality protein 1"
species:6239 "Caenorhabditis elegans" [GO:0001845 "phagolysosome
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IDA;IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0034620 "cellular response to unfolded protein"
evidence=IDA] [GO:0045184 "establishment of protein localization"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031532 "actin cytoskeleton reorganization" evidence=IDA]
[GO:0012501 "programmed cell death" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
GO:GO:0001891 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HSSP:P46531 GO:GO:0043652 GO:GO:0012501
GO:GO:0034620 InterPro:IPR006212 SMART:SM00261 GO:GO:0005044
HOGENOM:HOG000294130 GO:GO:0001845 EMBL:AF332568 EMBL:AL032657
PIR:T26972 RefSeq:NP_001021772.1 RefSeq:NP_001021773.1
RefSeq:NP_001076621.1 RefSeq:NP_740922.1 UniGene:Cel.7093
ProteinModelPortal:Q9XWD6 SMR:Q9XWD6 IntAct:Q9XWD6 MINT:MINT-223151
STRING:Q9XWD6 PaxDb:Q9XWD6 PRIDE:Q9XWD6 EnsemblMetazoa:Y47H9C.4a
GeneID:173064 KEGG:cel:CELE_Y47H9C.4 UCSC:Y47H9C.4a CTD:173064
WormBase:Y47H9C.4a WormBase:Y47H9C.4b WormBase:Y47H9C.4c
WormBase:Y47H9C.4d GeneTree:ENSGT00690000101691 InParanoid:Q9XWD6
OMA:VYNDTEQ NextBio:878121 GO:GO:0031260 GO:GO:0043654
Uniprot:Q9XWD6
Length = 1111
Score = 176 (67.0 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 78/276 (28%), Positives = 112/276 (40%)
Query: 1 CNCNGFSNRCFFDKELYN---RTG-HGGHC-LDCQGDRDGPNCEK---CRDN-YYQKSGD 51
C+C +N C D EL +G G C C ++ GPNC K C++ K G
Sbjct: 164 CDCENGAN-C--DPELGTCICTSGFQGERCEKPCPDNKWGPNCVKSCPCQNGGKCNKEGK 220
Query: 52 NFCTA------C--NCNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCK 102
C+ C C G +C E C C+ G T D + +C + + A C+
Sbjct: 221 CVCSDGWGGEFCLNKCEE-GKFGAECKFE--CNCQNGATCDNTNGKC-ICKSGYHGALCE 276
Query: 103 S-CE-------CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
+ C C N NCDS G+C+ + G+ H ++ SR F
Sbjct: 277 NECSVGFFGSGCTQKCDCLNNQNCDSSSGECKC--IGWTGK-HCDIGC-SRGRFG----- 327
Query: 155 IWDLRRCKRD-TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD--RCDVNHYDFGEAGC 210
+CK++ T P N C+++ G+CQC+ G G KCD +CD Y A C
Sbjct: 328 ----LQCKQNCTCPGLEFSDSNASCDAKTGQCQCESGYKGPKCDERKCDAEQYG---ADC 380
Query: 211 -KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
K+C C ++ PN G C CK G C
Sbjct: 381 SKTCTCVRENTLMCAPNT----GFCRCKPGFYGDNC 412
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 72/251 (28%), Positives = 95/251 (37%)
Query: 24 GHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G C C G NC+ C + Y G C C +N +C+ E G C C+PG
Sbjct: 531 GECT-CPAGLQGANCDIGCPEGSY---GPGCKLHCKC-----VNGKCDKETGECTCQPGF 581
Query: 82 TGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPNCD---SVKG-QCES-AQLSSRG 134
G C C Y GE+ C+ SC C+ A K T C KG C+ ++ G
Sbjct: 582 FGSDCSTTCSKGKY--GES-CELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKCDPNTFG 638
Query: 135 RVHTELRVQSR------KN-----FDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN---- 179
+ E S KN P + I C +Y G G C
Sbjct: 639 FLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHNCPAGSY--GDGCQQVCSCADGHG 696
Query: 180 ---SEGRCQCKPGVTGDKC-DRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDSVKGQC 234
+ G C C+PG G C ++C Y +G A C C +GS CD + G C
Sbjct: 697 CDPTTGECICEPGYHGKTCSEKCPDGKYGYGCALDCPKCA---SGST-----CDHINGLC 748
Query: 235 ECKDNVEGAQC 245
C +EGA C
Sbjct: 749 ICPAGLEGALC 759
Score = 142 (55.0 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 70/266 (26%), Positives = 98/266 (36%)
Query: 2 NCNGFSNRCFFDKELYNRTGHGGHC-LDCQGDRDGPNCEK-CRDNYYQKSGDNF-CTA-- 56
NC+ S C + TG HC + C R G C++ C + S N C A
Sbjct: 299 NCDSSSGEC----KCIGWTGK--HCDIGCSRGRFGLQCKQNCTCPGLEFSDSNASCDAKT 352
Query: 57 --CNCNPIGSLNLQCNSEGRCQCKP-GVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVK 113
C C G +C+ E +C + G K C + C C P
Sbjct: 353 GQCQCES-GYKGPKCD-ERKCDAEQYGADCSKTCTCVRENTLMCAPNTGFCRCKPGFYGD 410
Query: 114 NTP-NC--DSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR-CKRDTYPLG 169
N C DS CE + +E ++ G + C D Y G
Sbjct: 411 NCELACSKDSYGPNCEKQAMCDWNHA-SECNPETGSCVCKPGRTGKNCSEPCPLDFY--G 467
Query: 170 HGGSLNLQCN--------SEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGC-KSCECNPAG 219
+ QCN ++G+CQC G TG +C+ C + FG A C K C+C P G
Sbjct: 468 PNCAHQCQCNQRGVGCDGADGKCQCDRGWTGHRCEHHCPAD--TFG-ANCEKRCKC-PKG 523
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
CD + G+C C ++GA C
Sbjct: 524 I-----GCDPITGECTCPAGLQGANC 544
Score = 135 (52.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 44/139 (31%), Positives = 53/139 (38%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPI 62
NG C E G C C G C+K C D YY G + C C
Sbjct: 770 NGCRQVCRCTSEYKQCNAQTGEC-SCPAGFQGDRCDKPCEDGYY---GPDCIKKCKCQ-- 823
Query: 63 GSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
G+ CN G C C PG TG+ C C + FG C S EC P + CD+
Sbjct: 824 GTATSSCNRVSGACHCHPGFTGEFCHALCPES--TFG-LKC-SKEC-PKDGCGDGYECDA 878
Query: 121 VKGQCESAQLSSRGRVHTE 139
G C Q+S G+ E
Sbjct: 879 AIGCCHVDQMSC-GKAKQE 896
Score = 134 (52.2 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 33/89 (37%), Positives = 43/89 (48%)
Query: 39 EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKC-DRCDVNHYDFG 97
++C D YYQ D+FC +CNP +C G+C+C PG G C C V + G
Sbjct: 103 KQCCDGYYQTK-DHFCLP-DCNPPCKKG-KCIEPGKCECDPGYGGKYCASSCSVGTWGLG 159
Query: 98 EAGC-KSCECNPAGSVKNTPNCDSVKGQC 125
C KSC+C +N NCD G C
Sbjct: 160 ---CSKSCDC------ENGANCDPELGTC 179
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 50/175 (28%), Positives = 69/175 (39%)
Query: 77 CKPGVTGDKCDRCDVNHYDFGEAGCKSC--ECNPAG-SVKNTPNCDSVKGQCESAQLSSR 133
C P KC D G G K C C+ + + +CD G +L
Sbjct: 121 CNPPCKKGKCIEPGKCECDPGYGG-KYCASSCSVGTWGLGCSKSCDCENGANCDPEL--- 176
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGD 193
G Q + P + W C + P +GG +CN EG+C C G G+
Sbjct: 177 GTCICTSGFQGERCEKPCPDNKWG-PNCVKSC-PCQNGG----KCNKEGKCVCSDGWGGE 230
Query: 194 KC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C ++C+ FG A CK ECN +N CD+ G+C CK GA C +
Sbjct: 231 FCLNKCEEGK--FG-AECKF-ECN----CQNGATCDNTNGKCICKSGYHGALCEN 277
Score = 125 (49.1 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 177 QCNSE-GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
QCN++ G C C G GD+CD+ C+ +Y G K C+C G+ T +C+ V G C
Sbjct: 784 QCNAQTGECSCPAGFQGDRCDKPCEDGYY--GPDCIKKCKCQ--GTA--TSSCNRVSGAC 837
Query: 235 ECKDNVEGAQCRS 247
C G C +
Sbjct: 838 HCHPGFTGEFCHA 850
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G C+ C +G C + C ++ G+ C C S QCN++ G C C G
Sbjct: 746 GLCI-CPAGLEGALCTRPCSAGFW---GNGCRQVCRCT---SEYKQCNAQTGECSCPAGF 798
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
GD+CD+ C+ +Y G K C+C G+ T +C+ V G C
Sbjct: 799 QGDRCDKPCEDGYY--GPDCIKKCKCQ--GTA--TSSCNRVSGAC 837
>ZFIN|ZDB-GENE-030131-230 [details] [associations]
symbol:si:ch211-241e1.3 "si:ch211-241e1.3"
species:7955 "Danio rerio" [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 ZFIN:ZDB-GENE-030131-230 GO:GO:0030155 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 EMBL:AL935300 GO:GO:0005606
GeneTree:ENSGT00700000104042 IPI:IPI00484822
Ensembl:ENSDART00000058281 ArrayExpress:F1R4X8 Bgee:F1R4X8
Uniprot:F1R4X8
Length = 1368
Score = 198 (74.8 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 47/139 (33%), Positives = 70/139 (50%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN 60
C+CNG SN C +E + G CL+C + G CE C++ +Y CTAC C
Sbjct: 126 CSCNGHSNEC---EE------NTGRCLNCADNTAGQRCELCKEGFYWSEARRKCTACPC- 175
Query: 61 PIGSLN----LQCN---SEGRCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNPA 109
P+G+ + + C S +C CK G G++C+RC +Y +G GC+ C C A
Sbjct: 176 PLGNQDNNFAVGCTETQSRIQCVCKTGHAGERCERCASGYYGDPLVYG-GGCRPCRC--A 232
Query: 110 GSVKNTPNCDSVKGQCESA 128
G++ CDS G C ++
Sbjct: 233 GNL-----CDSKTGACRNS 246
Score = 129 (50.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 50/174 (28%), Positives = 77/174 (44%)
Query: 88 RCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQ 143
RC HY +G C C CN G ++ C+ G+C + ++ G+ EL
Sbjct: 107 RCPAGHY-LDRSGLFPRCVPCSCN--G---HSNECEENTGRCLNCADNTAGQ-RCEL--- 156
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGH-GGSLNLQCN-SEGR--CQCKPGVTGDKCDRCD 199
++ F + R R+C PLG+ + + C ++ R C CK G G++C+RC
Sbjct: 157 CKEGFYWSEAR----RKCTACPCPLGNQDNNFAVGCTETQSRIQCVCKTGHAGERCERCA 212
Query: 200 VNHYD----FGEAGCKSCECNPAGSVKNTPNCDSVKGQC----ECKDNVEGAQC 245
+Y +G GC+ C C AG++ CDS G C E +D QC
Sbjct: 213 SGYYGDPLVYG-GGCRPCRC--AGNL-----CDSKTGACRNSLELQDTNTEEQC 258
>MGI|MGI:96257 [details] [associations]
symbol:Hspg2 "perlecan (heparan sulfate proteoglycan 2)"
species:10090 "Mus musculus" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IMP]
[GO:0002062 "chondrocyte differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007420 "brain development" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IMP] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IMP] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] Reactome:REACT_112621 InterPro:IPR000742
InterPro:IPR002172 InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057
PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181
SMART:SM00192 MGI:MGI:96257 GO:GO:0008104 GO:GO:0007420
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030198 GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0048738 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186
Reactome:REACT_118324 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 SMART:SM00200 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 GO:GO:0005796
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
PDB:1GL4 PDBsum:1GL4 CTD:3339 eggNOG:NOG258321 HOGENOM:HOG000049276
HOVERGEN:HBG008174 KO:K06255 EMBL:M77174 EMBL:J04054 EMBL:J04055
IPI:IPI00113824 PIR:S18252 RefSeq:NP_032331.2 UniGene:Mm.273662
ProteinModelPortal:Q05793 SMR:Q05793 IntAct:Q05793 MINT:MINT-215413
STRING:Q05793 PhosphoSite:Q05793 PaxDb:Q05793 PRIDE:Q05793
GeneID:15530 KEGG:mmu:15530 EvolutionaryTrace:Q05793 NextBio:288458
CleanEx:MM_HSPG2 Genevestigator:Q05793
GermOnline:ENSMUSG00000028763 Uniprot:Q05793
Length = 3707
Score = 187 (70.9 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 64/211 (30%), Positives = 89/211 (42%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVTG 83
C GP+C+ C Y + + C CNC+ G C E G CQ C+ G
Sbjct: 1128 CPPGYRGPSCQDCDTGYTRVPSGLYLGTCERCNCH--GHSET-CEPETGACQSCQHHTEG 1184
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECN--PA-GSVKNTPNCDSVKGQ--CESAQLSSRG 134
C++C +Y + G C+ C C PA G +T D+ G C+S G
Sbjct: 1185 ASCEQCQPGYYGDAQRGTPQDCQPCPCYGAPAAGQAAHTCFLDT-DGHPTCDSCSPGHSG 1243
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRD-TYP--LGHG----GSLNLQCNSEGRCQCK 187
R H E R +P+ + C RD P LG G GS++ QC++ G+CQCK
Sbjct: 1244 R-HCE-RCAPGYYGNPSQGQ-----PCHRDGQVPEVLGCGCDPHGSISSQCDAAGQCQCK 1296
Query: 188 PGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
V G C C +H+ + GC C C
Sbjct: 1297 AQVEGRSCSHCRPHHFHLSASNPEGCLPCFC 1327
Score = 168 (64.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 55/189 (29%), Positives = 77/189 (40%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGCK--SCE-CNPAGSVKNTPNCDSVKGQCESAQL 130
+C C PG G C CD Y +G +CE CN G ++ C+ G C+S Q
Sbjct: 1125 QCTCPPGYRGPSCQDCDTG-YTRVPSGLYLGTCERCNCHG---HSETCEPETGACQSCQH 1180
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR--CQ-CK 187
+ G E + Q D D + C P + +++G C C
Sbjct: 1181 HTEG-ASCE-QCQPGYYGDAQRGTPQDCQPCPCYGAPAAGQAAHTCFLDTDGHPTCDSCS 1238
Query: 188 PGVTGDKCDRCDVNHYDFGEAG--CK---------SCECNPAGSVKNTPNCDSVKGQCEC 236
PG +G C+RC +Y G C C C+P GS+ + CD+ GQC+C
Sbjct: 1239 PGHSGRHCERCAPGYYGNPSQGQPCHRDGQVPEVLGCGCDPHGSISS--QCDAA-GQCQC 1295
Query: 237 KDNVEGAQC 245
K VEG C
Sbjct: 1296 KAQVEGRSC 1304
Score = 157 (60.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 36/113 (31%), Positives = 50/113 (44%)
Query: 7 SNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFC---------TA 56
++ CF D + GH C C G +CE+C YY S C
Sbjct: 1221 AHTCFLDTD-----GHPT-CDSCSPGHSGRHCERCAPGYYGNPSQGQPCHRDGQVPEVLG 1274
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
C C+P GS++ QC++ G+CQCK V G C C +H+ + GC C C
Sbjct: 1275 CGCDPHGSISSQCDAAGQCQCKAQVEGRSCSHCRPHHFHLSASNPEGCLPCFC 1327
Score = 147 (56.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 39/130 (30%), Positives = 59/130 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
CNCNG ++ C D +Y GHCL+CQ + +GP C+KC+ ++ K+ C C
Sbjct: 764 CNCNGHASSC--DP-VY------GHCLNCQHNTEGPQCDKCKPGFFGDATKATATACRPC 814
Query: 58 NCNPIGSLN-------LQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
C I + L + + C C PG TG +C+ C Y+ G +C P
Sbjct: 815 PCPYIDASRRFSDTCFLDTDGQATCDACAPGYTGRRCESCAPG-YE-GNPIQPGGKCRP- 871
Query: 110 GSVKNTPNCD 119
+ + CD
Sbjct: 872 -TTQEIVRCD 880
Score = 141 (54.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 44/156 (28%), Positives = 64/156 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
CNC+G S C + E G C CQ +G +CE+C+ YY Q+ C C
Sbjct: 1159 CNCHGHSETC--EPET-------GACQSCQHHTEGASCEQCQPGYYGDAQRGTPQDCQPC 1209
Query: 58 NCN--PI-GSLNLQC--NSEGR--CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
C P G C +++G C C PG +G C+RC +Y G C+
Sbjct: 1210 PCYGAPAAGQAAHTCFLDTDGHPTCDSCSPGHSGRHCERCAPGYYGNPSQGQP---CHRD 1266
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
G V C S+Q + G+ + +V+ R
Sbjct: 1267 GQVPEVLGCGCDPHGSISSQCDAAGQCQCKAQVEGR 1302
Score = 140 (54.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 58/227 (25%), Positives = 90/227 (39%)
Query: 13 DKELYNRTGHG-GHCLD---CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSL 65
D + + T HG H ++ C G +CE C ++ + G + C+ CNCN S
Sbjct: 713 DTTVTHTTIHGRAHSVEECRCPIGYSGLSCESCDAHFTRVPGGPYLGTCSGCNCNGHAS- 771
Query: 66 NLQCNSE-GRC-QCKPGVTGDKCDRCDVNHY-DFGEA---GCKSCECNPAGSVKN-TPNC 118
C+ G C C+ G +CD+C + D +A C+ C C + + + C
Sbjct: 772 --SCDPVYGHCLNCQHNTEGPQCDKCKPGFFGDATKATATACRPCPCPYIDASRRFSDTC 829
Query: 119 D-SVKGQ--CESAQLSSRGRVHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPL---GHG 171
GQ C++ GR R +S ++ GN I +C+ T +
Sbjct: 830 FLDTDGQATCDACAPGYTGR-----RCESCAPGYE--GNPIQPGGKCRPTTQEIVRCDER 882
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
GSL S C+CK V G C+ C + + GC C C
Sbjct: 883 GSLG---TSGETCRCKNNVVGRLCNECSDGSFHLSKQNPDGCLKCFC 926
Score = 130 (50.8 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 39/119 (32%), Positives = 50/119 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGD-NFCTAC 57
C CNG S+ C + TG C CQ + G CE C YY +G C C
Sbjct: 1563 CECNGHSDLC------HPETGA---CSRCQHNTAGEFCELCATGYYGDATAGTPEDCQPC 1613
Query: 58 NC---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
C NP + C S G RC C+PG TG C++C Y+ G+ + C P
Sbjct: 1614 ACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCAPG-YE-GDPNVQGGRCQP 1670
Score = 60 (26.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 21/83 (25%), Positives = 31/83 (37%)
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR----CDVNHYDFGEAGCK 211
+D C+R P +G + E +C C+ G GD C+ C ++ C+
Sbjct: 3420 YDSSPCERQ--PCRNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGTCR 3477
Query: 212 S--CECNPAGSVKNTPNCDSVKG 232
C C P S P C G
Sbjct: 3478 GARCLCLPGFS---GPRCQQGAG 3497
Score = 48 (22.0 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 19/77 (24%), Positives = 30/77 (38%)
Query: 175 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC-ECNPAGS--VKNTPNC---D 228
N+ + G C + V G R D+ + G G C + +P +N C
Sbjct: 3385 NMSAHFHG-CVGEVSVNGK---RLDLTYSFLGSQGVGQCYDSSPCERQPCRNGATCMPAG 3440
Query: 229 SVKGQCECKDNVEGAQC 245
+ QC C+D +G C
Sbjct: 3441 EYEFQCLCQDGFKGDLC 3457
Score = 44 (20.5 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 11/47 (23%), Positives = 20/47 (42%)
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+ G++ DVN G + C +C+ P + + +S C C
Sbjct: 3143 IQGEEIVFHDVNLTTHGISHCPTCQDRPCQNGGQCQDSESSSYTCVC 3189
Score = 43 (20.2 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRD 43
H GHC+ DG E CRD
Sbjct: 293 HSGHCIPRDYLCDGQ--EDCRD 312
Score = 38 (18.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 15/64 (23%), Positives = 24/64 (37%)
Query: 184 CQCKPGVTGDKCDRCDVNHYD-FGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
CQ +P G +C + + Y AG + N TP+ + C + + G
Sbjct: 3166 CQDRPCQNGGQCQDSESSSYTCVCPAGFTAAAVNIRKPCTATPSLWA-DATCVNRPDGRG 3224
Query: 243 AQCR 246
CR
Sbjct: 3225 YTCR 3228
>UNIPROTKB|F1P0Z5 [details] [associations]
symbol:Gga.39688 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005520 "insulin-like growth factor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000742
InterPro:IPR000867 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51323
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
GO:GO:0001558 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 OMA:QGAACDP EMBL:AADN02040897
EMBL:AADN02040898 EMBL:AADN02040899 EMBL:AADN02040900
EMBL:AADN02040901 IPI:IPI00584500 ProteinModelPortal:F1P0Z5
Ensembl:ENSGALT00000001544 Uniprot:F1P0Z5
Length = 1296
Score = 188 (71.2 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 79/262 (30%), Positives = 102/262 (38%)
Query: 12 FDKELYNRTGHGGHCLD----CQGDRDGPNCE-KCRDNYYQKSGD-NF-CTACNCNPIGS 64
+++E G H L C D GP+C C D Q G N T C C P G
Sbjct: 330 YEEEEEEMEARGEHTLSETFVCLEDTFGPDCSLTCED--CQNGGTCNVEGTGCEC-PAGW 386
Query: 65 LNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVK 122
L CN C PG G C + C + E +C C P + C K
Sbjct: 387 SGLLCNQT----CPPGTFGKNCSQLCLCQNGGTCEPATGTCRCPPGVAGIHCEDGCP--K 440
Query: 123 G----QC-ESAQLSSRGRVHTELRVQSRKNFDPA-GNRIWDLRRCKRDTYPLGHGGS--- 173
G QC + ++RGR H R+ DP R L C + + G G S
Sbjct: 441 GFFGKQCRKKCNCANRGRCH---RIYGACLCDPGLYGRYCHLA-CPK--WAFGPGCSEEC 494
Query: 174 LNLQCNSE------GRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTP 225
L +Q N++ G C CKPG +G C+ +C+ Y GE GCK C C P
Sbjct: 495 LCVQPNTQHCDKRDGSCSCKPGYSGVHCETKCEAGRY--GE-GCKKKCSCPPDA------ 545
Query: 226 NCDSVKGQC--ECKDNVEGAQC 245
CD + G+C EC G C
Sbjct: 546 RCDHITGRCWKECPQGYHGENC 567
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 65/246 (26%), Positives = 82/246 (33%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C C GP C C + G+ C+C S N C+ GRC C G
Sbjct: 809 GQC-HCHPGWTGPRCAHACPQGRF---GEGCSQVCSC----SNNATCDHITGRCLCTAGW 860
Query: 82 TGDKCDR-CDVNHYDFGEAGC-KSCECNPAGSVK-NTPNCDSVKG----QCESAQLSSRG 134
G C + C Y GC + C C G+ T +C G CE A G
Sbjct: 861 MGPTCQQACPEGFYG---TGCHQHCLCQNGGTCDPTTGHCICPMGWTGLACELACAEGHG 917
Query: 135 R-VHTELRVQSRKNFDPAGNRI----WDLRRCKRDTYPLGHGGSLNLQC---------NS 180
+ DP G W C+ P G S +C +
Sbjct: 918 DGCGQRCACLNGGVCDPQGQCQCPPGWSGSSCESPCLPGAFGKSCAERCACPPGAPCDHI 977
Query: 181 EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C C PG TG C+ C FGE + C C V T +C + G C C
Sbjct: 978 TGQCSCPPGFTGAACETPCPPG--TFGERCAQRCRC-----VGPTQDCHPISGVCVCAPG 1030
Query: 240 VEGAQC 245
G C
Sbjct: 1031 RHGPDC 1036
Score = 145 (56.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 68/247 (27%), Positives = 95/247 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACN---CNPI-GSLNLQCNSEG-RCQ- 76
G C +G R G CE C D +Y + C N C+ I G + G RC
Sbjct: 766 GACTCAEGWR-GTFCEHPCPDGFYGIECQHACNCQNGAHCDHITGQCHCHPGWTGPRCAH 824
Query: 77 -CKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C G G+ C + C ++ + C C AG + P C C + G
Sbjct: 825 ACPQGRFGEGCSQVCSCSNNATCDHITGRCLCT-AGWMG--PTCQQA---CPEGFYGT-G 877
Query: 135 RVHTELRVQSRKNFDPA-GNRI----WDLRRCKRDTYPLGHGGSLNLQC--------NSE 181
H Q+ DP G+ I W C+ GHG +C + +
Sbjct: 878 -CHQHCLCQNGGTCDPTTGHCICPMGWTGLACELACAE-GHGDGCGQRCACLNGGVCDPQ 935
Query: 182 GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+CQC PG +G C+ C FG++ + C C P G+ P CD + GQC C
Sbjct: 936 GQCQCPPGWSGSSCESPCLPGA--FGKSCAERCAC-PPGA----P-CDHITGQCSCPPGF 987
Query: 241 EGAQCRS 247
GA C +
Sbjct: 988 TGAACET 994
Score = 126 (49.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 68/259 (26%), Positives = 91/259 (35%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLD-CQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCN 60
C+ S RC TGH C C R G C++ C + S D AC C
Sbjct: 591 CDAVSRRCVCAP---GWTGHD--CAQACPEGRWGLGCQELCPECANNGSCDPATGACVCP 645
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC-------ECNPAGSVK 113
P G +C C PG G C C + G SC +C +V
Sbjct: 646 P-GFTGSRCQDV----CPPGWFGQSCS-CGNEGHCHPVTGTCSCAPGWTGHDCRRGCAVG 699
Query: 114 NT-PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
P C +V CE + SS G + Q + G+R + RC + LG
Sbjct: 700 RWGPGCANV---CECS--SSTGSCDA-VTGQCACDAGYTGSRCEE--RCPAGWFGLGCRR 751
Query: 173 SLNLQ----CNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
+ C+ G C C G G C+ C Y EC A + +N +
Sbjct: 752 RCQCEHGAMCDHVSGACTCAEGWRGTFCEHPCPDGFYGI--------ECQHACNCQNGAH 803
Query: 227 CDSVKGQCECKDNVEGAQC 245
CD + GQC C G +C
Sbjct: 804 CDHITGQCHCHPGWTGPRC 822
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 77/276 (27%), Positives = 99/276 (35%)
Query: 1 CNC--NGFSNR----CFFDKELYNRTGHGGHCLDCQGDRDGPNC-EKC---RDNYYQKSG 50
CNC G +R C D LY R H L C GP C E+C + N +
Sbjct: 451 CNCANRGRCHRIYGACLCDPGLYGRYCH----LACPKWAFGPGCSEECLCVQPN--TQHC 504
Query: 51 DNFCTACNCNPIGSLNLQCNS--------EG---RCQCKPG-----VTGDKCDRCDVNHY 94
D +C+C P G + C + EG +C C P +TG C ++
Sbjct: 505 DKRDGSCSCKP-GYSGVHCETKCEAGRYGEGCKKKCSCPPDARCDHITGRCWKECPQGYH 563
Query: 95 DFGEAGCKSCECNPAG--SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
GE C EC PAG C C++ +S R P G
Sbjct: 564 --GE-NCDQ-EC-PAGRFGAGCLLLCSCGGAPCDA--VSRRCVCAPGWTGHDCAQACPEG 616
Query: 153 NRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKC-DRCDVNHYDFGEAGC 210
W L C+ + GS C+ + G C C PG TG +C D C FG+
Sbjct: 617 R--WGLG-CQELCPECANNGS----CDPATGACVCPPGFTGSRCQDVCPPGW--FGQ--- 664
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
SC C G +C V G C C G CR
Sbjct: 665 -SCSCGNEG------HCHPVTGTCSCAPGWTGHDCR 693
Score = 110 (43.8 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 42/147 (28%), Positives = 60/147 (40%)
Query: 105 ECNPAGSVKNTPNCDSV-KGQCESAQL-SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK 162
E P G NTP+ ++ G C + ++ RG L S P G D C+
Sbjct: 1166 EIRP-GLRGNTPHLANICVGNCLTEEMWGFRGNSSVLLSGCSLPGCPP-GFHGTD---CQ 1220
Query: 163 RDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS-CECNPAGS 220
+ HG + C+ + G C C G+ G +C +GE GC+ C+C
Sbjct: 1221 QHC-DCAHGAA----CDPATGHCHCPVGLRGHRCQEAGCEEGTYGE-GCRQRCDC----- 1269
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQCRS 247
V N P CD + G C C G +C S
Sbjct: 1270 VGNAP-CDRITGHCLCPPGKTGPRCDS 1295
Score = 93 (37.8 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 32/106 (30%), Positives = 39/106 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C C G CE C + G+ C C +G C+ G C C PG
Sbjct: 979 GQC-SCPPGFTGAACETPCPPGTF---GERCAQRCRC--VGPTQ-DCHPISGVCVCAPGR 1031
Query: 82 TGDKCD-RCDVNHYDFGEAGC-KSCECNPAGSVKNTPNCDSVKGQC 125
G C+ C V Y GC + CEC KN C+ G C
Sbjct: 1032 HGPDCELECPVGWYG---PGCERPCEC------KNGARCERTTGTC 1068
Score = 69 (29.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/65 (32%), Positives = 28/65 (43%)
Query: 24 GHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
G C+ C R GP+CE +C +Y G C C G+ +C + G C C G
Sbjct: 1023 GVCV-CAPGRHGPDCELECPVGWY---GPGCERPCECKN-GA---RCERTTGTCHCPAGY 1074
Query: 82 TGDKC 86
G C
Sbjct: 1075 IGADC 1079
>UNIPROTKB|Q16363 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0001568
"blood vessel development" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0031012 "extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0030155
GO:GO:0070062 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pathway_Interaction_DB:amb2_neutrophils_pathway
Pathway_Interaction_DB:foxm1pathway Pfam:PF02210 GO:GO:0045995
GO:GO:0005201 eggNOG:NOG247347 GO:GO:0005606 EMBL:S78569
EMBL:X91171 EMBL:X70904 EMBL:AB210027 EMBL:BT006690 EMBL:Z99289
EMBL:AL590106 EMBL:BC004241 EMBL:Y14240 EMBL:X76939 IPI:IPI00024406
IPI:IPI00329482 IPI:IPI00735310 PIR:S68960 RefSeq:NP_001098676.2
RefSeq:NP_001098677.2 RefSeq:NP_001098678.1 RefSeq:NP_001098679.1
RefSeq:NP_002281.3 UniGene:Hs.654572 ProteinModelPortal:Q16363
SMR:Q16363 IntAct:Q16363 MINT:MINT-1200879 STRING:Q16363
PhosphoSite:Q16363 DMDM:292495093 PaxDb:Q16363 PRIDE:Q16363
DNASU:3910 Ensembl:ENST00000230538 Ensembl:ENST00000368638
Ensembl:ENST00000389463 Ensembl:ENST00000424408
Ensembl:ENST00000453937 Ensembl:ENST00000455073
Ensembl:ENST00000522006 Ensembl:ENST00000578470
Ensembl:ENST00000584877 Ensembl:ENST00000584945 GeneID:3910
KEGG:hsa:3910 UCSC:uc003pvt.2 UCSC:uc003pvu.2 UCSC:uc010kdz.1
CTD:3910 GeneCards:GC06M112475 HGNC:HGNC:6484 HPA:HPA015693
MIM:600133 neXtProt:NX_Q16363 PharmGKB:PA30273 HOVERGEN:HBG052299
InParanoid:Q16363 KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB
PhylomeDB:Q16363 ChiTaRS:LAMA4 GenomeRNAi:3910 NextBio:15351
ArrayExpress:Q16363 Bgee:Q16363 CleanEx:HS_LAMA4
Genevestigator:Q16363 GermOnline:ENSG00000112769 Uniprot:Q16363
Length = 1823
Score = 189 (71.6 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 51/149 (34%), Positives = 65/149 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS---GDNFCTAC 57
C+CNG SN C G G+C+ CQ + G +CEKC D Y S FC C
Sbjct: 82 CDCNGNSNECL--------DG-SGYCVHCQRNTTGEHCEKCLDGYIGDSIRGAPQFCQPC 132
Query: 58 NCNPIGSL-NL--QC---NSEGRCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECN 107
C P+ L N C N RC C G C+RC +Y G CK C+C+
Sbjct: 133 PC-PLPHLANFAESCYRKNGAVRCICNENYAGPNCERCAPGYYGNPLLIGST-CKKCDCS 190
Query: 108 PAGSVKNT--PNCDSVKGQCESAQLSSRG 134
S N +CD V GQC + ++ G
Sbjct: 191 -GNSDPNLIFEDCDEVTGQCRNCLRNTTG 218
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 60/213 (28%), Positives = 93/213 (43%)
Query: 36 PNCEKCRDNYYQK-SGDNFCTACNCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNH 93
P EKC ++ SG+ C C+CN G+ N + G C C+ TG+ C++C ++
Sbjct: 62 PAAEKCNAGFFHTLSGE--CVPCDCN--GNSNECLDGSGYCVHCQRNTTGEHCEKC-LDG 116
Query: 94 YDFGEA--G----CKSCECNPAGSVKN-TPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
Y G++ G C+ C C P + N +C G + + E +
Sbjct: 117 Y-IGDSIRGAPQFCQPCPC-PLPHLANFAESCYRKNGAVRCICNENYAGPNCE---RCAP 171
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ-CNS-EGRCQ-CKPGVTGDKCDRCDVNHY 203
+ GN + CK+ +L + C+ G+C+ C TG KC+RC +Y
Sbjct: 172 GY--YGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYY 229
Query: 204 DFGEAG-CKSCE-CNPAGSVKNTPNCDSVKGQC 234
G+A K+C CN G P CDSV G+C
Sbjct: 230 --GDARIAKNCAVCNCGGG----P-CDSVTGEC 255
>ZFIN|ZDB-GENE-070112-1202 [details] [associations]
symbol:zgc:158328 "zgc:158328" species:7955 "Danio
rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-070112-1202 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS00010 Pfam:PF12661
HOGENOM:HOG000097840 HOVERGEN:HBG079790 EMBL:BC129204
IPI:IPI00829071 RefSeq:NP_001073658.1 UniGene:Dr.95104
ProteinModelPortal:A1L1T4 STRING:A1L1T4 GeneID:567225
KEGG:dre:567225 InParanoid:A1L1T4 NextBio:20888577 Uniprot:A1L1T4
Length = 1339
Score = 186 (70.5 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 78/274 (28%), Positives = 103/274 (37%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTA-CN 58
C+C+G RC ++ TG C CQ +G C +CR+ Y G +C C+
Sbjct: 989 CSCSGDQYRC------HHITGR---C-SCQPGYNGNRCLLRCREGTY---GP-YCKKRCS 1034
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVK-NTP 116
C G + + G C C+PG G C C HY G + C C G T
Sbjct: 1035 CANGGRCDFR---NGSCICQPGYFGPNCSISCPSGHY--GRDCAQVCSCGEKGQCHPETG 1089
Query: 117 NCDSVKG----QCESAQLSSRGRVHTELR-VQSRKN---FDPAGNRI-----WDLRRCKR 163
C+ G CE Q+ RGR + R + N DP W + C++
Sbjct: 1090 RCNCAPGTTGLSCE--QMCPRGRYGVQCRSFCTCANGGVCDPVNGTCRCGLGWTGQHCEK 1147
Query: 164 DTYPLGHGGSLNLQ----CNSEGRCQ-------CKPGVTGDKCD-RCDVNHYDFGEAGCK 211
GH G +N + C + G C C G G C RC FGE +
Sbjct: 1148 VCVS-GHYG-VNCEQKCVCQNNGTCDRFTGCCSCPSGYYGPACQHRCPAGF--FGELCAQ 1203
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C K CD V G+CEC G QC
Sbjct: 1204 PCVC------KQGHQCDHVTGKCECPPGYHGNQC 1231
Score = 153 (58.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 67/250 (26%), Positives = 93/250 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C C G +CEK C + G N C+C+ G +C+ GRC C+PG
Sbjct: 959 GRC-GCPAGYTGNSCEKMCPQGRF---GLNCSRVCSCS--GD-QYRCHHITGRCSCQPGY 1011
Query: 82 TGDKCD-RCDVNHYD-FGEAGCK------------SCECNPAGSVKNTP-NCDSVKGQCE 126
G++C RC Y + + C SC C P N +C S +
Sbjct: 1012 NGNRCLLRCREGTYGPYCKKRCSCANGGRCDFRNGSCICQPGYFGPNCSISCPSGHYGRD 1071
Query: 127 SAQLSS---RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ----CN 179
AQ+ S +G+ H E R N P + + C R Y + C+
Sbjct: 1072 CAQVCSCGEKGQCHPET---GRCNCAPGTTGLSCEQMCPRGRYGVQCRSFCTCANGGVCD 1128
Query: 180 S-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCEC 236
G C+C G TG C++ C HY C+ C C +N CD G C C
Sbjct: 1129 PVNGTCRCGLGWTGQHCEKVCVSGHYG---VNCEQKCVC------QNNGTCDRFTGCCSC 1179
Query: 237 KDNVEGAQCR 246
G C+
Sbjct: 1180 PSGYYGPACQ 1189
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 64/242 (26%), Positives = 93/242 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACN---CNPI-GSLNLQCNSEGR-CQ- 76
G C +C G +CE+ C Y +FCT N C+P+ G+ G+ C+
Sbjct: 1089 GRC-NCAPGTTGLSCEQMCPRGRYGVQCRSFCTCANGGVCDPVNGTCRCGLGWTGQHCEK 1147
Query: 77 -CKPGVTGDKCDR---CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS-VKGQ-CESAQL 130
C G G C++ C N GC SC G C + G+ C +
Sbjct: 1148 VCVSGHYGVNCEQKCVCQNNGTCDRFTGCCSCPSGYYGPACQH-RCPAGFFGELCAQPCV 1206
Query: 131 SSRGRVHTELRVQSRKNFDPA--GNRIWDLRRCKRDTYPLGHGGSLNLQ---CN-SEGRC 184
+G H V + P GN+ +RC+ + G + C+ + G+C
Sbjct: 1207 CKQG--HQCDHVTGKCECPPGYHGNQCE--KRCESGRFGRDCAGVCDCDGASCDPTTGQC 1262
Query: 185 QCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C PG TG++C++ CD +Y G CEC G CD G C C G
Sbjct: 1263 LCPPGKTGERCEKVCDSRYY--GPDCSFQCECVHGGQ------CDPQTGHCSCPQTWLGP 1314
Query: 244 QC 245
C
Sbjct: 1315 TC 1316
Score = 148 (57.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 70/254 (27%), Positives = 101/254 (39%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQ--CKPG 80
G CL C+ G C+ C D Y+ G CNC+ S + + G CQ C G
Sbjct: 698 GTCL-CKPGYHGDRCQTDCDDGYF---GVGCHGLCNCSDGKSCDPKT---GECQRMCPAG 750
Query: 81 VTGDKCDR-CDVNHYDFGEAGCKS-CEC-NPAGSVKNTPN---CDS-VKGQ-CESAQLSS 132
G+KC C+ F AGC + C+C + A S +++ C+S GQ C+ S
Sbjct: 751 YHGEKCQMVCEAG---FWGAGCANVCQCASNAVSCESSSGRCVCESGYTGQHCDKK--CS 805
Query: 133 RGRVHTELR----VQSRKNFDPAGNRI-----WDLRRCKRDTYPLGHGG---SLNLQCNS 180
G + + ++ D W C++ P+G G + QC +
Sbjct: 806 EGLYGADCKQVCECENGAECDHVSGACTCAAGWVGSHCEKRC-PVGFYGQDCAQMCQCRN 864
Query: 181 E-------GRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
E G C+C PG C C FG +SC+C+ GS CD V G
Sbjct: 865 EAQCHHITGACRCTPGWAPPHCILACPAG--TFGLNCSQSCDCHNGGS------CDPVSG 916
Query: 233 QCECKDNVEGAQCR 246
QC C G +C+
Sbjct: 917 QCSCAPGWTGDRCQ 930
Score = 126 (49.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 64/264 (24%), Positives = 96/264 (36%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNP 61
C+G N C K +TG C G C+ C ++ N C C N
Sbjct: 724 CHGLCN-CSDGKSCDPKTGECQRM--CPAGYHGEKCQMVCEAGFWGAGCANVCQ-CASNA 779
Query: 62 IG--SLNLQCNSEG-----RC--QCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGS 111
+ S + +C E C +C G+ G C + C+ + + +C C AG
Sbjct: 780 VSCESSSGRCVCESGYTGQHCDKKCSEGLYGADCKQVCECENGAECDHVSGACTC-AAGW 838
Query: 112 VKN--TPNCD-SVKGQ-C-ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
V + C GQ C + Q + + H + P + C T+
Sbjct: 839 VGSHCEKRCPVGFYGQDCAQMCQCRNEAQCH---HITGACRCTPGWAPPHCILACPAGTF 895
Query: 167 PLGHGGSLNLQ----CNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 221
L S + C+ G+C C PG TGD+C + + + FG+ + C C P G
Sbjct: 896 GLNCSQSCDCHNGGSCDPVSGQCSCAPGWTGDRCQQTCASGW-FGKNCEQKCIC-PVGVA 953
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
CD V G+C C G C
Sbjct: 954 -----CDHVTGRCGCPAGYTGNSC 972
Score = 117 (46.2 bits), Expect = 0.00092, P = 0.00092
Identities = 71/269 (26%), Positives = 102/269 (37%)
Query: 2 NCNGFSNRCFFDKELYNRTGHGGHC-LDCQGDRDGPNCEK-CR-DNYYQ---KSGDNFCT 55
+C S RC + Y G HC C G +C++ C +N + SG C
Sbjct: 781 SCESSSGRCVCESG-YT----GQHCDKKCSEGLYGADCKQVCECENGAECDHVSGACTCA 835
Query: 56 A----CNCN---PIGSLNLQCNSEGRC----QCKPGVTGDKCDRCDVN----HYDFG-EA 99
A +C P+G C +C QC +TG C RC H A
Sbjct: 836 AGWVGSHCEKRCPVGFYGQDCAQMCQCRNEAQCHH-ITG-AC-RCTPGWAPPHCILACPA 892
Query: 100 GCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
G C+ + N +CD V GQC A G T R Q +G W +
Sbjct: 893 GTFGLNCSQSCDCHNGGSCDPVSGQCSCAP----G--WTGDRCQQTC---ASG---WFGK 940
Query: 160 RCKRDTY-PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECN 216
C++ P+G + C+ GRC C G TG+ C++ C FG + C C+
Sbjct: 941 NCEQKCICPVG------VACDHVTGRCGCPAGYTGNSCEKMCPQGR--FGLNCSRVCSCS 992
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G + C + G+C C+ G +C
Sbjct: 993 --G---DQYRCHHITGRCSCQPGYNGNRC 1016
>MGI|MGI:109321 [details] [associations]
symbol:Lama4 "laminin, alpha 4" species:10090 "Mus musculus"
[GO:0001568 "blood vessel development" evidence=IMP] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005606 "laminin-1
complex" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IDA] [GO:0070062
"extracellular vesicular exosome" evidence=ISO] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 MGI:MGI:109321
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
eggNOG:NOG247347 GO:GO:0005606 CTD:3910 HOVERGEN:HBG052299
KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB ChiTaRS:LAMA4 EMBL:U58950
EMBL:Y09827 EMBL:U59865 EMBL:BC115942 EMBL:U88352 EMBL:U69176
IPI:IPI00223446 RefSeq:NP_034811.2 UniGene:Mm.258065
ProteinModelPortal:P97927 SMR:P97927 STRING:P97927
PhosphoSite:P97927 PaxDb:P97927 PRIDE:P97927
Ensembl:ENSMUST00000019992 GeneID:16775 KEGG:mmu:16775
UCSC:uc007evq.2 HOGENOM:HOG000113278 InParanoid:Q14BF2
NextBio:290616 Bgee:P97927 CleanEx:MM_LAMA4 Genevestigator:P97927
GermOnline:ENSMUSG00000019846 Uniprot:P97927
Length = 1816
Score = 187 (70.9 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 52/149 (34%), Positives = 66/149 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GD-NFCTAC 57
C+CNG S+ C G G CL CQ + G +CEKC D Y S G FC C
Sbjct: 82 CDCNGNSHECL--------DG-SGFCLHCQRNTTGEHCEKCLDGYIGDSIRGTPRFCQPC 132
Query: 58 NCNPIGSL-NL--QC---NSEGRCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECN 107
C P+ L N C N RC CK G C+RC +Y G CK C+C+
Sbjct: 133 PC-PLPHLANFAESCYRKNGAVRCICKENYVGPNCERCAPGYYGNPLLIGST-CKKCDCS 190
Query: 108 PAGSVKNT--PNCDSVKGQCESAQLSSRG 134
S N +CD + GQC + ++ G
Sbjct: 191 -GNSDPNLIFEDCDEITGQCRNCLRNTTG 218
Score = 153 (58.9 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 52/171 (30%), Positives = 68/171 (39%)
Query: 87 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
+RCD + C C+CN G N+ C G C Q ++ G H E K
Sbjct: 65 ERCDAGFFRTLSGECAPCDCN--G---NSHECLDGSGFCLHCQRNTTGE-HCE------K 112
Query: 147 NFDP-AGNRIWDLRR-CKRDTYPLGHGGSLNLQC---NSEGRCQCKPGVTGDKCDRCDVN 201
D G+ I R C+ PL H + C N RC CK G C+RC
Sbjct: 113 CLDGYIGDSIRGTPRFCQPCPCPLPHLANFAESCYRKNGAVRCICKENYVGPNCERCAPG 172
Query: 202 HYD----FGEAGCKSCECNPAGSVKNT--PNCDSVKGQCE-CKDNVEGAQC 245
+Y G CK C+C+ S N +CD + GQC C N G +C
Sbjct: 173 YYGNPLLIGST-CKKCDCS-GNSDPNLIFEDCDEITGQCRNCLRNTTGFKC 221
Score = 138 (53.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 58/213 (27%), Positives = 93/213 (43%)
Query: 36 PNCEKCRDNYYQK-SGDNFCTACNCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNH 93
P E+C +++ SG+ C C+CN G+ + + G C C+ TG+ C++C ++
Sbjct: 62 PAAERCDAGFFRTLSGE--CAPCDCN--GNSHECLDGSGFCLHCQRNTTGEHCEKC-LDG 116
Query: 94 YDFGEA--G----CKSCECNPAGSVKN-TPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
Y G++ G C+ C C P + N +C G + V +
Sbjct: 117 Y-IGDSIRGTPRFCQPCPC-PLPHLANFAESCYRKNGAVRC--ICKENYVGPNCERCAPG 172
Query: 147 NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ-CNS-EGRCQ-CKPGVTGDKCDRCDVNHY 203
+ GN + CK+ +L + C+ G+C+ C TG KC+RC +Y
Sbjct: 173 YY---GNPLLIGSTCKKCDCSGNSDPNLIFEDCDEITGQCRNCLRNTTGFKCERCAPGYY 229
Query: 204 DFGEAG-CKSCE-CNPAGSVKNTPNCDSVKGQC 234
G+A K+C CN G P CDSV G+C
Sbjct: 230 --GDARTAKNCAVCNCGGG----P-CDSVTGEC 255
>UNIPROTKB|I3LGD9 [details] [associations]
symbol:I3LGD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043236 "laminin binding" evidence=IEA] [GO:0043113
"receptor clustering" evidence=IEA] [GO:0007213 "G-protein coupled
acetylcholine receptor signaling pathway" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV
InterPro:IPR011497 GeneTree:ENSGT00530000063501 EMBL:FP565685
Ensembl:ENSSSCT00000026215 Uniprot:I3LGD9
Length = 2039
Score = 187 (70.9 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 61/227 (26%), Positives = 92/227 (40%)
Query: 33 RDGPNCEK--CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGD-KCDRC 89
R GP CE+ C D C C G + + + +G C C G + C
Sbjct: 663 RGGP-CEQAECGSGGSGSGEDGECEQELCRQRGGIWDEDSEDGPCVCDFSCQGVLRSPVC 721
Query: 90 DVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGR---VHTELRVQSR 145
+ +G E K C+ + +G C S L+ R +H
Sbjct: 722 GSDGVTYGTECELKKARCDSRQELYVV-----AQGACRSPTLAPRPPAVPLHCAQAPYGC 776
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYD 204
+ R L C HG S + C+ + G+C C+PGV G KCDRC+ ++
Sbjct: 777 CQDNITAARGVGLAGCPSSCQCNPHG-SYSGTCDPATGQCSCRPGVGGLKCDRCEPGFWN 835
Query: 205 F------GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
F G +GC C C+P G+V++ +C+ + G C CK V G +C
Sbjct: 836 FRGIVTDGRSGCTPCSCDPQGAVRD--DCEQMTGLCSCKPGVAGPKC 880
Score = 153 (58.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQ-----KSGDNFCTACNCNPIGSLNLQCNS-EGRCQC 77
G C C+ G C++C ++ G + CT C+C+P G++ C G C C
Sbjct: 813 GQC-SCRPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTPCSCDPQGAVRDDCEQMTGLCSC 871
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKS 103
KPGV G KC +C H G AGC++
Sbjct: 872 KPGVAGPKCGQCPDGHA-LGPAGCET 896
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 51/157 (32%), Positives = 63/157 (40%)
Query: 97 GEAGC-KSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI 155
G AGC SC+CNP GS T CD GQC S R V L+ +P
Sbjct: 788 GLAGCPSSCQCNPHGSYSGT--CDPATGQC-----SCRPGVGG-LKCD---RCEPG---F 833
Query: 156 WDLRRCKRD----TYPLGHG--GSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEA 208
W+ R D P G++ C G C CKPGV G KC +C H G A
Sbjct: 834 WNFRGIVTDGRSGCTPCSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGHA-LGPA 892
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
GC++ P + P C+ G C + A C
Sbjct: 893 GCETDPSAPK-TCAEMP-CEF--G-ASCVEEAGSAHC 924
Score = 59 (25.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 23/79 (29%), Positives = 30/79 (37%)
Query: 172 GSLNLQCNSEG--RCQCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCD 228
GS Q G CQC PG G C E G C+ C+ A P +
Sbjct: 1553 GSAPCQALEAGMFHCQCPPGRFGPTCAE---------EKGPCQPNPCHGAAPCHVLPQGE 1603
Query: 229 SVKGQCECKDNVEGAQCRS 247
+ QCEC G+ C++
Sbjct: 1604 A---QCECPRGRGGSLCQT 1619
Score = 52 (23.4 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 98 EAGCKSCECNPAGSVKNTPNCDSVKGQCE 126
EAG C+C P + P C KG C+
Sbjct: 1561 EAGMFHCQCPPG---RFGPTCAEEKGPCQ 1586
Score = 36 (17.7 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 166 YPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
+P +G S L + C C G +G C++
Sbjct: 1818 HPCLNGASC-LPRGASYECLCPGGFSGLHCEK 1848
>UNIPROTKB|F1LWS0 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0030155 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
InterPro:IPR000034 Pfam:PF00052 PROSITE:PS51115 GO:GO:0005606
IPI:IPI00566251 Ensembl:ENSRNOT00000051597 ArrayExpress:F1LWS0
Uniprot:F1LWS0
Length = 1728
Score = 186 (70.5 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 59/222 (26%), Positives = 93/222 (41%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDK 85
C+ C + G +C++C YY+ + F C + QC+ +C PG +G
Sbjct: 74 CM-CPANYRGDSCQECAPGYYRDTKGLFLGRC-------VPCQCHGHSD-RCLPG-SGT- 122
Query: 86 CDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSR 145
C C H G+ C+ C S + P V C A S+ LR R
Sbjct: 123 CVGCQ--HNTEGDQ-CERCRPGFVSSDPSDPASPCVSCPCPLAVPSNNFADGCILR-NGR 178
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLN-LQCNSE-GRCQCKPGVTGDKCDRCDVNHY 203
G+ + +C+ +P G + +CN + G+C C+PG TG +C C ++
Sbjct: 179 TQRVLEGH--FGFEQCQ-GCHPCACGPAAEGSECNPQTGQCHCRPGTTGPQCLECAPGYW 235
Query: 204 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
E GC+ C+C P G +CD G+C C + G +C
Sbjct: 236 GLPEKGCRRCQC-PRG------HCDPHTGRCTCPPGLSGERC 270
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 57/212 (26%), Positives = 80/212 (37%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS-GD--NFCTAC 57
C C+G S+RC G G C+ CQ + +G CE+CR + D + C +C
Sbjct: 107 CQCHGHSDRCL--------PG-SGTCVGCQHNTEGDQCERCRPGFVSSDPSDPASPCVSC 157
Query: 58 NCN-PIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA-GCKSCECNPAGSVKNT 115
C + S N ++G C + G T R H+ F + GC C C PA
Sbjct: 158 PCPLAVPSNNF---ADG-CILRNGRT----QRVLEGHFGFEQCQGCHPCACGPAAEGSE- 208
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR--CK----RDTYPLG 169
C+ GQC + + G E G R R C R T P G
Sbjct: 209 --CNPQTGQCH-CRPGTTGPQCLEC-APGYWGLPEKGCRRCQCPRGHCDPHTGRCTCPPG 264
Query: 170 HGGSLNLQCNSEGRCQC--KPGVTGDKCDRCD 199
G C+ + + +PG G C+ CD
Sbjct: 265 LSGERCDTCSQQHQVPVPGRPGSHGIHCEVCD 296
>MGI|MGI:1919351 [details] [associations]
symbol:Megf6 "multiple EGF-like-domains 6" species:10090
"Mus musculus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1919351
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 EMBL:AL627123 InterPro:IPR013111
Pfam:PF07974 InterPro:IPR026823 Pfam:PF12662
GeneTree:ENSGT00690000101691 CTD:1953 HOGENOM:HOG000097840
HOVERGEN:HBG079790 EMBL:BC031402 EMBL:BC039980 EMBL:BC058571
IPI:IPI00676714 RefSeq:NP_001156449.1 UniGene:Mm.275216
ProteinModelPortal:Q80V70 SMR:Q80V70 STRING:Q80V70
PhosphoSite:Q80V70 PRIDE:Q80V70 Ensembl:ENSMUST00000030897
GeneID:230971 KEGG:mmu:230971 UCSC:uc008wbp.2 InParanoid:Q80V70
OrthoDB:EOG4CZBF1 ChiTaRS:MEGF6 NextBio:380326 Bgee:Q80V70
CleanEx:MM_MEGF6 Genevestigator:Q80V70
GermOnline:ENSMUSG00000057751 Uniprot:Q80V70
Length = 1572
Score = 185 (70.2 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 79/266 (29%), Positives = 105/266 (39%)
Query: 5 GFSNRCFFDKELYNRTGHG--GHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNP 61
G S C ++ + R+ + G C C+ G CE +C + N CT C P
Sbjct: 651 GCSEDCLCEQS-HTRSCNSKDGSC-SCKAGFQGERCEAECEPGSFGPGCRNRCT---CRP 705
Query: 62 IGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
G + E R QC PG G+ C + C V + +G SC P V C
Sbjct: 706 -GVACDPVSGECRTQCPPGYQGEDCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPP 764
Query: 121 VK-GQ-CESAQLSSR-GRVHTEL--RVQSRKNFDPAGNRIWDL-----RRCKRDTYPLG- 169
K G+ C + R G E+ + + DP L RC+ D P G
Sbjct: 765 GKTGEDCGADCPEGRWGLGCQEICPACEHGASCDPETGTCLCLPGFVGSRCQ-DACPAGW 823
Query: 170 HGGSLNLQC---N------SEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAG 219
G ++C N + GRC C PG TG C R CD H+ G C C+ AG
Sbjct: 824 FGTGCQMRCACANDGHCHPATGRCSCAPGWTGLSCQRACDSGHW--GPDCIHPCNCS-AG 880
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
NCD+V G C C+ EG QC
Sbjct: 881 H----GNCDAVSGLCLCEAGYEGPQC 902
Score = 180 (68.4 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 76/249 (30%), Positives = 94/249 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C+ C + G +CE+ C + + K ++ C AC N G L C++ G C C G
Sbjct: 1320 GTCI-CPPGKTGGHCERGCPQDRFGKGCEHKC-ACR-N--GGL---CHATNGSCSCPLGW 1371
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPN---CD-SVKGQ-CES---AQLSS 132
G C+ C Y G A C C GS + T C GQ CE A
Sbjct: 1372 MGPHCEHACPAGRY--GAACLLECSCQNNGSCEPTSGACLCGPGFYGQACEDTCPAGFHG 1429
Query: 133 RGRVHTELRVQSRKNFDPAGNRIW---DLRR--CKRDTYPLGHGGSLNLQCNS------- 180
G Q DP R R C+R P G QCNS
Sbjct: 1430 SG-CQRVCECQQGAPCDPVSGRCLCPAGFRGQFCERGCKPGFFGDGCLQQCNSPTGVPCD 1488
Query: 181 --EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCECK 237
G C C PG G CD D FG GC C+C G+ +CD + GQC C
Sbjct: 1489 PISGLCLCPPGRAGTTCD-LDCRRGRFGP-GCALRCDCG-GGA-----DCDPISGQCHCV 1540
Query: 238 DNVEGAQCR 246
D+ G CR
Sbjct: 1541 DSYTGPTCR 1549
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 77/269 (28%), Positives = 94/269 (34%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEK---CRDNYYQ----KSGDNFCT 55
C+ C D LY R H L C GP C + C ++ + K G C
Sbjct: 621 CHRLYGACLCDPGLYGRFCH----LACPPWAFGPGCSEDCLCEQSHTRSCNSKDGSCSCK 676
Query: 56 A------CN--CNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSC-- 104
A C C P GS C + RC C+PGV D C G G + C
Sbjct: 677 AGFQGERCEAECEP-GSFGPGCRN--RCTCRPGVACDPVSGECRTQCPP-GYQG-EDCGQ 731
Query: 105 ECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI----WDLRR 160
EC P G+ NC G C RV E K + G W L
Sbjct: 732 EC-PVGTFG--VNCS---GSCSCVGAPCH-RVTGECLCPPGKTGEDCGADCPEGRWGLG- 783
Query: 161 CKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKS-CECNP 217
C+ HG S C+ E G C C PG G +C D C FG GC+ C C
Sbjct: 784 CQEICPACEHGAS----CDPETGTCLCLPGFVGSRCQDACPAGW--FG-TGCQMRCAC-- 834
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
N +C G+C C G C+
Sbjct: 835 ----ANDGHCHPATGRCSCAPGWTGLSCQ 859
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 64/242 (26%), Positives = 83/242 (34%)
Query: 22 HGGHCLD-CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPG 80
HG C C R GP CE+ + D AC C P G L C+ C G
Sbjct: 1243 HGTDCQQRCPSGRYGPGCEQICKCLNGGTCDPATGACYC-PAGFLGADCS----LACPQG 1297
Query: 81 VTGDKCDR-CDVNHYDFGEAGCKSCECNPAGS----VKNTPNCDSVKGQCESAQLSSRGR 135
G C C + +C C P + + P KG CE G
Sbjct: 1298 RFGPSCAHVCTCGQGAACDPVSGTCICPPGKTGGHCERGCPQDRFGKG-CEHKCACRNGG 1356
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-HGGSLNLQCNSE---------GRCQ 185
+ + P G W C+ P G +G + L+C+ + G C
Sbjct: 1357 L---CHATNGSCSCPLG---WMGPHCEH-ACPAGRYGAACLLECSCQNNGSCEPTSGACL 1409
Query: 186 CKPGVTGDKC-DRCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C PG G C D C F +GC+ CEC + P CD V G+C C G
Sbjct: 1410 CGPGFYGQACEDTCPAG---FHGSGCQRVCECQ-----QGAP-CDPVSGRCLCPAGFRGQ 1460
Query: 244 QC 245
C
Sbjct: 1461 FC 1462
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 67/251 (26%), Positives = 93/251 (37%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
G C C G +C++ D+ + G + CNC+ G N S G C C+ G G
Sbjct: 845 GRC-SCAPGWTGLSCQRACDSGHW--GPDCIHPCNCSA-GHGNCDAVS-GLCLCEAGYEG 899
Query: 84 DKCDRCDVNHYDFGEAGCKS-CECNPAGS---VKNTPNCDSV-KGQ-CESA------QLS 131
+C++ Y FG GC+ C C + V C + +G CE A L
Sbjct: 900 PQCEQWCRQGY-FGP-GCEQKCRCEHGATCDHVSGACTCPAGWRGSFCEHACPAGFFGLD 957
Query: 132 SRGRVHTELRVQ----SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC---NSE--- 181
+ + PAG W C + PL G + + C N
Sbjct: 958 CGSACNCSAGAPCDAVTGSCICPAGR--WG-PHCAQTCPPLTFGLNCSQICTCFNGASCD 1014
Query: 182 ---GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCEC 236
G+C C PG G C C Y G+ C+ SC C GS CD + GQC C
Sbjct: 1015 PVLGQCHCAPGWMGPTCLQACPAGLY--GK-NCQHSCLCRNGGS------CDPILGQCTC 1065
Query: 237 KDNVEGAQCRS 247
+ G C +
Sbjct: 1066 PEGWTGLACEN 1076
Score = 118 (46.6 bits), Expect = 0.00085, P = 0.00085
Identities = 67/247 (27%), Positives = 84/247 (34%)
Query: 23 GGHCLD-CQGDRDGPNCEK---CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
G CL C G NC+ CR+ S D C C P G L C +E C
Sbjct: 1028 GPTCLQACPAGLYGKNCQHSCLCRNG---GSCDPILGQCTC-PEGWTGLACENE----CL 1079
Query: 79 PGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
PG G C C + + C C PAG + +C+S +S VH
Sbjct: 1080 PGHHGAGCRLNCSCLNGGTCDRLTGHCRC-PAGWTGD---------KCQSPCVSGMFGVH 1129
Query: 138 TELRVQSRKN---FDPAGNRI----WDLRRCKRDTYPLGHGGSLNLQ---------CNS- 180
E RK G + W C++ P G G Q C+
Sbjct: 1130 CEEHCACRKGATCHHVTGACLCPPGWRGSHCEQ-ACPRGWFGEACAQRCHCPPGASCHHV 1188
Query: 181 EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C C PG TG C++ C FG K CE +P T C G C C
Sbjct: 1189 SGECHCPPGFTGPGCEQACQPG--TFG----KDCE-HPCQCPGETWACHPASGACVCAAG 1241
Query: 240 VEGAQCR 246
G C+
Sbjct: 1242 YHGTDCQ 1248
Score = 96 (38.9 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 182 GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C C G TG C+ C H+ AGC+ +C C G+ CD + G C C
Sbjct: 1061 GQCTCPEGWTGLACENECLPGHHG---AGCRLNCSCLNGGT------CDRLTGHCRCPAG 1111
Query: 240 VEGAQCRS 247
G +C+S
Sbjct: 1112 WTGDKCQS 1119
Score = 92 (37.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 30/90 (33%), Positives = 36/90 (40%)
Query: 166 YPLGHGGSLNLQ-CNSEGRC-------QCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CEC 215
+ GH SL C + G C C G TG C+ C + FG+ C S C C
Sbjct: 516 HSFGHDCSLTCDDCRNGGTCFPGLDGCDCPEGWTGIICNETCPPD--TFGK-NCSSPCIC 572
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ CD V G C C V GA C
Sbjct: 573 QNGGT------CDPVSGACRCPPGVSGAHC 596
Score = 90 (36.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 34/113 (30%), Positives = 44/113 (38%)
Query: 22 HGGHCL------DCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EG 73
+GG C DC G C E C + + G N + C C G+ C+ G
Sbjct: 531 NGGTCFPGLDGCDCPEGWTGIICNETCPPDTF---GKNCSSPCICQNGGT----CDPVSG 583
Query: 74 RCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
C+C PGV+G C D C Y G+ K C C N C + G C
Sbjct: 584 ACRCPPGVSGAHCEDGCPKGFY--GKHCRKKCHC------ANRGRCHRLYGAC 628
Score = 86 (35.3 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 23/71 (32%), Positives = 28/71 (39%)
Query: 178 CN-SEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQC 234
C+ + G C C G G C RC Y GC+ C+C G+ CD G C
Sbjct: 1229 CHPASGACVCAAGYHGTDCQQRCPSGRYG---PGCEQICKCLNGGT------CDPATGAC 1279
Query: 235 ECKDNVEGAQC 245
C GA C
Sbjct: 1280 YCPAGFLGADC 1290
Score = 76 (31.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 31/112 (27%), Positives = 42/112 (37%)
Query: 9 RCF-FDKELYN--RTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN-CNPIGS 64
+C+ + E+ N G+GG C GP C C Y C + C
Sbjct: 325 QCYRIEMEIVNSCEAGNGGCSHGCSHTSTGPLCT-CPRGYELDEDQKTCIDIDDCANSPC 383
Query: 65 LNLQC-NSEG--RCQCKPG--VTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
C N+ G C C G + D C DV+ G +GC+ N AGS
Sbjct: 384 CQQVCANTPGGYECSCFAGYRLNTDGCGCEDVDECASGHSGCEHHCSNLAGS 435
>FB|FBgn0004647 [details] [associations]
symbol:N "Notch" species:7227 "Drosophila melanogaster"
[GO:0007498 "mesoderm development" evidence=IMP] [GO:0007398
"ectoderm development" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005622 "intracellular" evidence=NAS;IDA]
[GO:0016360 "sensory organ precursor cell fate determination"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP;TAS] [GO:0030707 "ovarian follicle cell development"
evidence=IMP;TAS] [GO:0001708 "cell fate specification"
evidence=NAS;TAS] [GO:0007219 "Notch signaling pathway"
evidence=NAS] [GO:0009952 "anterior/posterior pattern
specification" evidence=TAS] [GO:0036011 "imaginal disc-derived leg
segmentation" evidence=IMP] [GO:0007478 "leg disc morphogenesis"
evidence=TAS] [GO:0061382 "Malpighian tubule tip cell
differentiation" evidence=IMP] [GO:0005887 "integral to plasma
membrane" evidence=NAS] [GO:0004872 "receptor activity"
evidence=NAS;TAS] [GO:0045165 "cell fate commitment" evidence=NAS]
[GO:0007424 "open tracheal system development" evidence=TAS]
[GO:0035155 "negative regulation of terminal cell fate
specification, open tracheal system" evidence=TAS] [GO:0035157
"negative regulation of fusion cell fate specification"
evidence=TAS] [GO:0007446 "imaginal disc growth" evidence=TAS]
[GO:0007447 "imaginal disc pattern formation" evidence=TAS]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=NAS;TAS] [GO:0007155 "cell adhesion" evidence=TAS]
[GO:0016021 "integral to membrane" evidence=IEA;TAS] [GO:0045463
"R8 cell development" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007460 "R8 cell fate commitment" evidence=TAS]
[GO:0007422 "peripheral nervous system development"
evidence=IMP;TAS] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP;TAS] [GO:0016333 "morphogenesis of follicular
epithelium" evidence=NAS] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=TAS] [GO:0007314 "oocyte
anterior/posterior axis specification" evidence=TAS] [GO:0007451
"dorsal/ventral lineage restriction, imaginal disc" evidence=TAS]
[GO:0042067 "establishment of ommatidial planar polarity"
evidence=NAS;TAS] [GO:0048749 "compound eye development"
evidence=NAS;TAS] [GO:0007423 "sensory organ development"
evidence=IMP] [GO:0016330 "second mitotic wave involved in compound
eye morphogenesis" evidence=NAS] [GO:0046667 "compound eye retinal
cell programmed cell death" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045465 "R8 cell differentiation"
evidence=NAS] [GO:0045468 "regulation of R8 cell spacing in
compound eye" evidence=NAS] [GO:0061331 "epithelial cell
proliferation involved in Malpighian tubule morphogenesis"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP;NAS] [GO:0007450 "dorsal/ventral
pattern formation, imaginal disc" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA;NAS;TAS] [GO:0046331 "lateral inhibition"
evidence=IMP;NAS;TAS] [GO:0046329 "negative regulation of JNK
cascade" evidence=NAS] [GO:0007391 "dorsal closure" evidence=TAS]
[GO:0001737 "establishment of imaginal disc-derived wing hair
orientation" evidence=NAS] [GO:0009608 "response to symbiont"
evidence=IMP] [GO:0035171 "lamellocyte differentiation"
evidence=IMP] [GO:0042688 "crystal cell differentiation"
evidence=IMP] [GO:0042676 "compound eye cone cell fate commitment"
evidence=TAS] [GO:0035162 "embryonic hemopoiesis" evidence=IMP]
[GO:0035172 "hemocyte proliferation" evidence=IMP] [GO:0035167
"larval lymph gland hemopoiesis" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007464 "R3/R4 cell fate commitment"
evidence=NAS] [GO:0046666 "retinal cell programmed cell death"
evidence=TAS] [GO:0007473 "wing disc proximal/distal pattern
formation" evidence=TAS] [GO:0042689 "regulation of crystal cell
differentiation" evidence=TAS] [GO:0008356 "asymmetric cell
division" evidence=TAS] [GO:0007419 "ventral cord development"
evidence=NAS] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007521
"muscle cell fate determination" evidence=IMP] [GO:0042686
"regulation of cardioblast cell fate specification" evidence=IMP]
[GO:0045466 "R7 cell differentiation" evidence=IMP;TAS] [GO:0008587
"imaginal disc-derived wing margin morphogenesis" evidence=IMP]
[GO:0007346 "regulation of mitotic cell cycle" evidence=TAS]
[GO:0035170 "lymph gland crystal cell differentiation"
evidence=TAS] [GO:0048477 "oogenesis" evidence=IMP] [GO:0030720
"oocyte localization involved in germarium-derived egg chamber
formation" evidence=IMP] [GO:0035165 "embryonic crystal cell
differentiation" evidence=TAS] [GO:0040008 "regulation of growth"
evidence=IGI;IMP] [GO:0001745 "compound eye morphogenesis"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007440 "foregut morphogenesis" evidence=IMP] [GO:0007616
"long-term memory" evidence=IGI;IMP;TAS] [GO:0007615
"anesthesia-resistant memory" evidence=IMP] [GO:0048542 "lymph
gland development" evidence=IMP] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=IDA;IMP] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IMP] [GO:0045316
"negative regulation of compound eye photoreceptor development"
evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045750 "positive regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0007015 "actin
filament organization" evidence=IMP] [GO:0048190 "wing disc
dorsal/ventral pattern formation" evidence=IMP] [GO:0007298 "border
follicle cell migration" evidence=IMP] [GO:0007297 "ovarian
follicle cell migration" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] [GO:0031410 "cytoplasmic vesicle"
evidence=IDA] [GO:0048666 "neuron development" evidence=IMP]
[GO:0010001 "glial cell differentiation" evidence=IMP] [GO:0008347
"glial cell migration" evidence=IMP] [GO:0035003 "subapical
complex" evidence=IDA] [GO:0005912 "adherens junction"
evidence=IDA] [GO:0035153 "epithelial cell type specification, open
tracheal system" evidence=IMP] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0050767 "regulation of neurogenesis"
evidence=IMP] [GO:0048863 "stem cell differentiation" evidence=IMP]
[GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0010629 "negative regulation of gene expression"
evidence=IMP] [GO:0043234 "protein complex" evidence=IPI]
[GO:0030718 "germ-line stem cell maintenance" evidence=IMP]
[GO:0048052 "R1/R6 cell differentiation" evidence=IMP] [GO:0035214
"eye-antennal disc development" evidence=IMP] [GO:0007400
"neuroblast fate determination" evidence=IDA] [GO:0045595
"regulation of cell differentiation" evidence=IMP] [GO:0008045
"motor neuron axon guidance" evidence=IMP] [GO:0051489 "regulation
of filopodium assembly" evidence=IMP] [GO:0016348 "imaginal
disc-derived leg joint morphogenesis" evidence=IMP] [GO:0048803
"imaginal disc-derived male genitalia morphogenesis" evidence=IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0060288 "formation of
a compartment boundary" evidence=IMP] Reactome:REACT_84305
Reactome:REACT_97910 InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005829 GO:GO:0048190 GO:GO:0043234
GO:GO:0005654 GO:GO:0009986 GO:GO:0007015 GO:GO:0007498
GO:GO:0007391 eggNOG:COG0666 GO:GO:0008284 GO:GO:0005768
GO:GO:0007474 EMBL:AE014298 GO:GO:0061331 GO:GO:0007464
GO:GO:0007419 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0045944 GO:GO:0007219 GO:GO:0007616
GO:GO:0007422 GO:GO:0005509 GO:GO:0045747 GO:GO:0006351
GO:GO:0003682 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007400
GO:GO:0000122 GO:GO:0008045 GO:GO:0005788 GO:GO:0007298
GO:GO:0005912 GO:GO:0040008 PROSITE:PS01186 GO:GO:0046331
GO:GO:0007157 PROSITE:PS00010 GO:GO:0005796 GO:GO:0046329
GO:GO:0007398 GO:GO:0004888 GO:GO:0008356 GO:GO:0030718
GO:GO:0045750 GO:GO:0007451 GO:GO:0051489 GO:GO:0050768
GO:GO:0046843 GO:GO:0046667 GO:GO:0035153 GO:GO:0030720
GO:GO:0008347 GO:GO:0030713 GO:GO:0061382 GO:GO:0008407
GO:GO:0016330 GO:GO:0008587 GO:GO:0007314 GO:GO:0016348
GO:GO:0009608 GO:GO:0035172 GO:GO:0035214 GO:GO:0035003
GO:GO:0030708 GO:GO:0045463 GO:GO:0007519
GeneTree:ENSGT00700000104305 GO:GO:0007403 GO:GO:0060288
GO:GO:0007446 GO:GO:0007440 GO:GO:0007473 GO:GO:0035171
GO:GO:0042676 GO:GO:0035157 GO:GO:0035155 GO:GO:0007460
GO:GO:0045468 GO:GO:0045466 GO:GO:0048052 GO:GO:0048803
EMBL:AL035395 GO:GO:0035165 SUPFAM:SSF90193 GO:GO:0007521
GO:GO:0045316 GO:GO:0035170 KO:K02599 InterPro:IPR024600
Pfam:PF11936 EMBL:M16152 EMBL:M16153 EMBL:M16149 EMBL:M16150
EMBL:M16151 EMBL:K03508 EMBL:M13689 EMBL:K03507 EMBL:AL035436
EMBL:M16025 EMBL:M12175 PIR:A24420 RefSeq:NP_001245510.1
RefSeq:NP_476859.2 UniGene:Dm.4702 PDB:1OT8 PDB:2JMF PDBsum:1OT8
PDBsum:2JMF ProteinModelPortal:P07207 SMR:P07207 DIP:DIP-5N
IntAct:P07207 MINT:MINT-133064 STRING:P07207 PaxDb:P07207
EnsemblMetazoa:FBtr0070507 EnsemblMetazoa:FBtr0304659 GeneID:31293
KEGG:dme:Dmel_CG3936 CTD:109544 FlyBase:FBgn0004647
InParanoid:P07207 OMA:VCMPGFT OrthoDB:EOG43N5TG
Reactome:REACT_118588 EvolutionaryTrace:P07207 GenomeRNAi:31293
NextBio:772898 Bgee:P07207 GermOnline:CG3936 GO:GO:0042686
GO:GO:0042689 Uniprot:P07207
Length = 2703
Score = 186 (70.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 76/255 (29%), Positives = 98/255 (38%)
Query: 7 SNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLN 66
SN C FD +R G +C CQ G NCE N N C + CN G+
Sbjct: 645 SNPCQFDGHCQDRVG-SYYC-QCQAGTSGKNCEV---NV------NECHSNPCNN-GATC 692
Query: 67 LQCNSEGRCQCKPGVTGDKCDR---------CDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
+ + +CQC PG TG C++ C N + CEC P G +
Sbjct: 693 IDGINSYKCQCVPGFTGQHCEKNVDECISSPCANNGVCIDQVNGYKCEC-PRGFYD--AH 749
Query: 118 CDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA--GNRI-WDLRRCKRDTYPLGHGGSL 174
C S +C S + GR + + + P G R D+ C + P HGG+
Sbjct: 750 CLSDVDECASNPCVNEGRCEDGIN-EFICHCPPGYTGKRCELDIDECSSN--PCQHGGTC 806
Query: 175 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC-DSVKG- 232
+ N+ CQC PG TG KC E C NP G N C D V G
Sbjct: 807 YDKLNAFS-CQCMPGYTGQKC-----------ETNIDDCVTNPCG---NGGTCIDKVNGY 851
Query: 233 QCECKDNVEGAQCRS 247
+C CK G C S
Sbjct: 852 KCVCKVPFTGRDCES 866
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 61/244 (25%), Positives = 87/244 (35%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
H G C++ G NC + ++ N C + C GS L RC C PG
Sbjct: 461 HNGICVNTPGSYRC-NCSQGFTGPRCETNINECESHPCQNEGSC-LDDPGTFRCVCMPGF 518
Query: 82 TGDKC----DRCDVNHYDFGEAGC----KSCECNPAGSVKNTPNCDSVKGQCESAQLSSR 133
TG +C D C N + C +C+ A C C+S +R
Sbjct: 519 TGTQCEIDIDECQSNPC-LNDGTCHDKINGFKCSCALGFTGA-RCQINIDDCQSQPCRNR 576
Query: 134 GRVHTELRVQSRK---NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
G H + S + + I ++ C D+ P G ++ NS +C C PG
Sbjct: 577 GICHDSIAGYSCECPPGYTGTSCEI-NINDC--DSNPCHRGKCID-DVNSF-KCLCDPGY 631
Query: 191 TGDKCDR----CDVNHYDFG-----EAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
TG C + C+ N F G C+C S KN C+ +C
Sbjct: 632 TGYICQKQINECESNPCQFDGHCQDRVGSYYCQCQAGTSGKN---CEVNVNECHSNPCNN 688
Query: 242 GAQC 245
GA C
Sbjct: 689 GATC 692
>ZFIN|ZDB-GENE-050208-475 [details] [associations]
symbol:lama3 "laminin, alpha 3" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-050208-475 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 EMBL:BX465190 Pfam:PF02210 GO:GO:0045995
GO:GO:0005606 GeneTree:ENSGT00700000104042 IPI:IPI00994085
Ensembl:ENSDART00000126827 Bgee:F1QV32 Uniprot:F1QV32
Length = 1681
Score = 182 (69.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 49/142 (34%), Positives = 63/142 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCL-----DCQGDRDGPNCEKCRDNYYQKSGDNFCT 55
CNCNG S C D H G CL CQ G +CE+C + YY + C
Sbjct: 29 CNCNGLSGDC--DP-------HTGKCLLKYFTACQHKYAGDHCERCMEGYYGSAILRTCR 79
Query: 56 ACNC---NPIGSLNLQC---NSEGRCQCKPGVTGDKCDRCDVNHYD--FGEAG-CKSCEC 106
C C +P S + C E C CKPG +G +C+RC + +Y E G C+ C+C
Sbjct: 80 MCPCPLTDPAKSFAVGCLGVGDEFECLCKPGYSGVRCERCALGYYGSPLAERGSCQPCDC 139
Query: 107 NPAGSVKNTPNCDSVKGQCESA 128
G V CD + G C A
Sbjct: 140 EH-GYV-----CDPLTGDCYEA 155
>UNIPROTKB|F1N812 [details] [associations]
symbol:SLC26A6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0008271
"secondary active sulfate transmembrane transporter activity"
evidence=IEA] [GO:0008272 "sulfate transport" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
InterPro:IPR000203 InterPro:IPR000742 InterPro:IPR000832
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR001902
InterPro:IPR002126 InterPro:IPR011547 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR017983 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF00916 Pfam:PF01825
PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00179
SMART:SM00181 SMART:SM00303 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0008272 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:DGRRVDM GO:GO:0008271
Gene3D:3.30.750.24 InterPro:IPR002645 SUPFAM:SSF52091
PROSITE:PS50801 Pfam:PF01740 TIGRFAMs:TIGR00815 EMBL:AADN02014037
EMBL:AADN02014038 EMBL:AADN02014039 EMBL:AADN02014040
IPI:IPI00594732 Ensembl:ENSGALT00000009205 ArrayExpress:F1N812
Uniprot:F1N812
Length = 3737
Score = 181 (68.8 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 41/116 (35%), Positives = 56/116 (48%)
Query: 1 CNCNG--FSNRCFFDKELYNRTGHGGH--CLDCQGD-RDG--PNCEK------CRDNYYQ 47
C C G F C + G G+ C C D G P+C K C+D +Y+
Sbjct: 1667 CECGGNFFGQYCEHRMDQQCPKGWWGNPSCGPCNCDVSKGFDPDCNKTNGQCHCKDFHYR 1726
Query: 48 KSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 102
G + C C+C P+GS + CN E GRC C+PGV G +C+ CD + +GCK
Sbjct: 1727 PKGSDTCLPCDCYPVGSSSRSCNKETGRCHCRPGVIGRQCNSCDSPFAEVTPSGCK 1782
Score = 134 (52.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 50/167 (29%), Positives = 72/167 (43%)
Query: 50 GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT-GDKCDRCDVNHY-DFGEAGC-KSCEC 106
G AC+ NP C ++ C+ KPG G C+ C N + + E + C
Sbjct: 1637 GGECVDACHLNP-------CKNKSVCRRKPGSPLGYVCE-CGGNFFGQYCEHRMDQQCPK 1688
Query: 107 NPAGSVKNTP-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
G+ P NCD KG + G+ H + ++ P G+ C D
Sbjct: 1689 GWWGNPSCGPCNCDVSKGFDPDCN-KTNGQCHCK-----DFHYRPKGSDT--CLPC--DC 1738
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
YP+G S + CN E GRC C+PGV G +C+ CD + +GCK
Sbjct: 1739 YPVG---SSSRSCNKETGRCHCRPGVIGRQCNSCDSPFAEVTPSGCK 1782
>UNIPROTKB|E1BGE0 [details] [associations]
symbol:E1BGE0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
GeneTree:ENSGT00690000101691 OMA:QGAACDP EMBL:DAAA02043188
EMBL:DAAA02043189 EMBL:DAAA02043190 IPI:IPI00703880
Ensembl:ENSBTAT00000027771 Uniprot:E1BGE0
Length = 1572
Score = 180 (68.4 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 76/247 (30%), Positives = 94/247 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C C R G +CE C N + G N AC+C G L C++ G C C G
Sbjct: 1319 GSC-SCPPGRTGVHCEHGCPQNRF---GVNCEHACSCRN-GGL---CHATNGSCSCGLGW 1370
Query: 82 TGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPN---CD-SVKGQ-CE-SAQLSSRG 134
TG C+ C Y G A C C+ G+ + T C GQ CE S G
Sbjct: 1371 TGPHCELACPAGRY--GAACSLECSCHNHGACEPTSGACRCGPGFYGQACEHSCPPGFHG 1428
Query: 135 R-VHTELRVQSRKNFDP-AGNRIWDL----RRCKRDTYPLGHGGSLNLQCNSE------- 181
+ Q DP +G + + C+R P G QC+ E
Sbjct: 1429 AGCQQTCQCQHGAPCDPVSGQCLCPAGLHGQFCERGCEPGSFGEGCGQQCDCELGVPCDP 1488
Query: 182 --GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C C PG TG CD FG GC + C+ G +CD V GQC C D
Sbjct: 1489 VTGHCLCPPGRTGTTCD-LGCRRGFFGP-GC-ALHCSCGGGA----DCDPVSGQCLCVDG 1541
Query: 240 VEGAQCR 246
G CR
Sbjct: 1542 YTGPTCR 1548
Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 73/267 (27%), Positives = 98/267 (36%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNC-EKCR-DNYYQKSGDNFCTACNCN 60
C+ C D LY R H L C GP C E+C+ + ++ D +C C
Sbjct: 620 CHRLYGACLCDPGLYGRFCH----LACPPWAFGPGCSEECKCEQQNTRACDKRDGSCACK 675
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDR---------CDVNHYDFGE---AGCKSCECN- 107
G C E C+PG G C + CD + G+ AG +C
Sbjct: 676 A-GFRGEWCQDE----CQPGFFGPGCRQACTCPPGVACDPVSGECGKQCPAGYHGEDCGQ 730
Query: 108 --PAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI----WDLRRC 161
PAG+ NC G C RV + + D G W L C
Sbjct: 731 ECPAGTFGQ--NCS---GSCSCGDAPC-DRVTGQCLCPPGRTGDDCGADCPEGRWGLG-C 783
Query: 162 KRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAG 219
+ P HG + C E G C C+PG G +C D C FG GC++ +C+ A
Sbjct: 784 QEICPPCEHGAA----CVPETGACLCRPGFMGSRCQDACPAGW--FGP-GCQT-QCSCA- 834
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQCR 246
N C V G+C C G C+
Sbjct: 835 ---NDGLCHPVTGRCSCAPGWTGLSCQ 858
Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 72/265 (27%), Positives = 93/265 (35%)
Query: 1 CNCNGFSNRCF-FDKELYNRTG-HGGHCLD-CQGDRDGPNCEKCRDNYYQKSGDNFCTAC 57
C+C G + C G HG C C R GP CE S D AC
Sbjct: 1219 CHCPGENQACHPASGTCACAPGYHGAGCQQRCPPGRFGPGCELLCGCLNGGSCDAVTGAC 1278
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGS-VKNT 115
C P G L C+ C G G C C + SC C P + V
Sbjct: 1279 RC-PAGFLGTDCS----LACPHGRFGPGCAYVCGCGQGAACDPVTGSCSCPPGRTGVHCE 1333
Query: 116 PNCDSVK-G-QCESA-QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-HG 171
C + G CE A + G H N + W C+ P G +G
Sbjct: 1334 HGCPQNRFGVNCEHACSCRNGGLCHAT-------NGSCSCGLGWTGPHCEL-ACPAGRYG 1385
Query: 172 GSLNLQCN---------SEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCK-SCECNPAGS 220
+ +L+C+ + G C+C PG G C+ C F AGC+ +C+C
Sbjct: 1386 AACSLECSCHNHGACEPTSGACRCGPGFYGQACEHSCPPG---FHGAGCQQTCQCQ---- 1438
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
P CD V GQC C + G C
Sbjct: 1439 -HGAP-CDPVSGQCLCPAGLHGQFC 1461
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 73/251 (29%), Positives = 93/251 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G CL C+ G C+ C ++ G T C+C G C+ GRC C PG
Sbjct: 801 GACL-CRPGFMGSRCQDACPAGWF---GPGCQTQCSCANDGL----CHPVTGRCSCAPGW 852
Query: 82 TGDKCDR-CDVNHY----DF------GEAGCKS----CECNPAGSVKNTPNCDSVKGQCE 126
TG C R CD H+ F G GC + C C AG V P C+ +C
Sbjct: 853 TGLSCQRACDSGHWGPDCSFTCNCSAGHGGCDAVSGLCVCE-AGYVG--PRCEQ---RCP 906
Query: 127 SAQLSSR-GRV----H-TELRVQSRKNFDPAGNR-IWDLRRCKRDTYPL--GHGG--SLN 175
GR H S PAG R + R C + + GH S
Sbjct: 907 QGYFGPGCGRQCQCEHGAACDHVSGACTCPAGWRGTFCERACPAGFFGVDCGHACDCSAG 966
Query: 176 LQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
+ C+ G C C G G +C + H FG ++C C N +CD V GQC
Sbjct: 967 VPCDPVSGSCLCPSGRQGPRCAQTCPAHM-FGHNCSQACSCF------NGASCDPVHGQC 1019
Query: 235 ECKDNVEGAQC 245
C G C
Sbjct: 1020 RCGPGWTGPTC 1030
Score = 121 (47.7 bits), Expect = 0.00038, P = 0.00038
Identities = 65/248 (26%), Positives = 86/248 (34%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACN---CNPIGSLNLQCNSEG----RC 75
G C C GP C + C + Y + + C N C+P+ + C EG C
Sbjct: 1017 GQCR-CGPGWTGPTCLQACPEGLYGEDCQHSCLCQNGGSCDPVSG-HCTC-PEGWAGLAC 1073
Query: 76 Q--CKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSV--KNTPNC-DSVKGQ-CESA 128
+ C PGV C C + + C C PAG K +C + G CE
Sbjct: 1074 EKECLPGVFEVGCPHSCGCLNGGLCDPHTVHCLC-PAGWTGDKCQSSCPEGTFGVLCEER 1132
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYP--LGHGGSLNLQC-------N 179
G + P G W RC+ P G + QC +
Sbjct: 1133 CACRWGAA---CHAVTGACLCPPG---WRGSRCESACPPSWFGEACAQRCQCPPGAACHH 1186
Query: 180 SEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G C C PG TG C++ C FGE + C C P +N C G C C
Sbjct: 1187 VTGECHCPPGFTGPSCEQACPPG--TFGERCGQQCHC-PG---ENQA-CHPASGTCACAP 1239
Query: 239 NVEGAQCR 246
GA C+
Sbjct: 1240 GYHGAGCQ 1247
Score = 91 (37.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/63 (36%), Positives = 27/63 (42%)
Query: 184 CQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C G TG C+ C + FG+ SC C G+ CD V G C C V G
Sbjct: 541 CDCPDGWTGLVCNETCPPD--TFGKNCSFSCSCQNGGT------CDPVTGACRCPPGVGG 592
Query: 243 AQC 245
A C
Sbjct: 593 AHC 595
Score = 88 (36.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 28/93 (30%), Positives = 35/93 (37%)
Query: 161 CKRDTYPLGHGGSLNLQCNS-------EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKS 212
C DT+ G S + C + G C+C PGV G C D C Y G+ K
Sbjct: 556 CPPDTF--GKNCSFSCSCQNGGTCDPVTGACRCPPGVGGAHCEDGCPKGFY--GKHCRKK 611
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C N C + G C C + G C
Sbjct: 612 CHC------ANRGRCHRLYGACLCDPGLYGRFC 638
Score = 82 (33.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 35/126 (27%), Positives = 46/126 (36%)
Query: 1 CNCN-GFS-----NRCF-FDKELYN--RTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGD 51
C CN G+ +C+ + E+ N +GG C GP C C Y
Sbjct: 310 CVCNAGYELGADGRQCYRIEMEIVNSCEADNGGCSHGCSHSSAGPVCT-CPHGYELDEDQ 368
Query: 52 NFCTACN-CNPIGSLNLQC-NSEG--RCQCKPG--VTGDKCDRCDVNHYDFGEAGCKSCE 105
C + C C NS G C C G ++ D C DV+ G GC+
Sbjct: 369 RTCIDVDDCAASPCCQQVCTNSPGGYECSCYAGYRLSADGCGCEDVDECASGRGGCEHHC 428
Query: 106 CNPAGS 111
N AGS
Sbjct: 429 ANLAGS 434
>UNIPROTKB|F1PR66 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 OMA:QLDDYNA EMBL:AAEX03008620
Ensembl:ENSCAFT00000006483 Uniprot:F1PR66
Length = 1760
Score = 180 (68.4 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 50/148 (33%), Positives = 64/148 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GD-NFCTAC 57
C CNG S+ C G G C+ CQ + G +CEKC D Y S G FC C
Sbjct: 25 CVCNGNSDECL--------DG-SGFCVHCQRNTTGEHCEKCLDGYIGDSIRGPPRFCQPC 75
Query: 58 NCN-P-IGSLNLQC---NSEGRCQCKPGVTGDKCDRCDVNHYD----FGEAGCKSCECNP 108
C P + + C N RC CK G C+RC +Y G CK C+C+
Sbjct: 76 PCPLPYVANFAESCYRKNGAVRCICKENYAGPNCERCAPGYYGNPLLIGST-CKKCDCS- 133
Query: 109 AGSVKNT--PNCDSVKGQCESAQLSSRG 134
S N +CD V GQC + ++ G
Sbjct: 134 GNSDPNLIFEDCDEVTGQCRNCLRNTTG 161
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 51/171 (29%), Positives = 68/171 (39%)
Query: 88 RCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRK 146
+C + ++G C C CN G N+ C G C Q ++ G H E K
Sbjct: 9 KCGAGFF-LAQSGECMPCVCN--G---NSDECLDGSGFCVHCQRNTTGE-HCE------K 55
Query: 147 NFDP-AGNRIWDLRR-CKRDTYPLGHGGSLNLQC---NSEGRCQCKPGVTGDKCDRCDVN 201
D G+ I R C+ PL + + C N RC CK G C+RC
Sbjct: 56 CLDGYIGDSIRGPPRFCQPCPCPLPYVANFAESCYRKNGAVRCICKENYAGPNCERCAPG 115
Query: 202 HYD----FGEAGCKSCECNPAGSVKNT--PNCDSVKGQCE-CKDNVEGAQC 245
+Y G CK C+C+ S N +CD V GQC C N G +C
Sbjct: 116 YYGNPLLIGST-CKKCDCS-GNSDPNLIFEDCDEVTGQCRNCLRNTTGFKC 164
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 58/210 (27%), Positives = 92/210 (43%)
Query: 39 EKCRDNYY-QKSGDNFCTACNCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDF 96
+KC ++ +SG+ C C CN G+ + + G C C+ TG+ C++C ++ Y
Sbjct: 8 QKCGAGFFLAQSGE--CMPCVCN--GNSDECLDGSGFCVHCQRNTTGEHCEKC-LDGY-I 61
Query: 97 GEA--G----CKSCECNPAGSVKN-TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD 149
G++ G C+ C C P V N +C G + + E + +
Sbjct: 62 GDSIRGPPRFCQPCPC-PLPYVANFAESCYRKNGAVRCICKENYAGPNCE---RCAPGY- 116
Query: 150 PAGNRIWDLRRCKRDTYPLGHGGSLNLQ-CNS-EGRCQ-CKPGVTGDKCDRCDVNHYDFG 206
GN + CK+ +L + C+ G+C+ C TG KC+RC +Y G
Sbjct: 117 -YGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYY--G 173
Query: 207 EAG-CKSCE-CNPAGSVKNTPNCDSVKGQC 234
+A K+C CN G P CDSV G+C
Sbjct: 174 DARIAKNCAVCNCGGG----P-CDSVTGEC 198
>UNIPROTKB|F1NXF9 [details] [associations]
symbol:Gga.18391 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662
GeneTree:ENSGT00690000101691 EMBL:AADN02021036 EMBL:AADN02021034
EMBL:AADN02021035 IPI:IPI00587188 ProteinModelPortal:F1NXF9
Ensembl:ENSGALT00000015394 OMA:YECACKE Uniprot:F1NXF9
Length = 1371
Score = 179 (68.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 68/256 (26%), Positives = 98/256 (38%)
Query: 9 RCFFDKELYNRTGHGGHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNL 67
RC +++ + TG C+ C+ G C++ C + Y G N +C C G
Sbjct: 1019 RCRAEEDCHPITGR---CV-CRLGYHGAQCDRRCPEGTY---GSNCQKSCKCMNGG---- 1067
Query: 68 QCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
C+ G C C PG G C + C N Y G+ C C T +C GQ
Sbjct: 1068 HCDPVSGTCDCAPGFIGADCSKTCPENRY--GKDCALFCACGKGHCDPRTGSCTCPPGQM 1125
Query: 126 ESA--QLSSRGRVHTELRVQ-SRKN---FDPAGNRI-----WDLRRCKRDTYPLGHGGSL 174
Q+ +GR R+ S +N D W + C+++ P +G +
Sbjct: 1126 GPGCQQVCPQGRFGPSCRLTCSCQNGAICDHVDGSCTCGLGWTGKSCEKECLPGKYGPNC 1185
Query: 175 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFG-EAGCK----SCECNPAGSVKNTPNCDS 229
+L C+ + C TG C C Y E GC C A + KN +CD+
Sbjct: 1186 SLDCSCQHNGTCDR-FTG--CCLCPAGFYGRSCEHGCPPGFYGLSCLHACACKNGASCDA 1242
Query: 230 VKGQCECKDNVEGAQC 245
V GQC C G C
Sbjct: 1243 VMGQCICPSGYHGIHC 1258
Score = 153 (58.9 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 69/251 (27%), Positives = 98/251 (39%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C G R G CE+ C+ + + G CNC+ G+L C+ G C C PG
Sbjct: 816 GTCRCLPGWR-GETCEQPCQGDRF---GQGCAHTCNCHN-GAL---CDHITGTCACTPGW 867
Query: 82 TGDKC-DRCDVNHYDFGEAGC-KSCECNPAGSVKN--TPNCDSVKG----QCESAQ---- 129
G C + C + AGC + C C P + + T C KG CE A
Sbjct: 868 GGATCQEACPPGWHG---AGCLQRCIC-PGQTACDPVTGKCQCSKGGTGTSCELACPPGF 923
Query: 130 LSSRGRVHTELRVQSRKNFDPAGN----RIWDLRRCKRDTYPLGHGG---SLNLQCNS-- 180
R + + S G + W R C + P GH G + C +
Sbjct: 924 FGERCEEQCDC-IHSVSCHPQTGACRCAKGWRGRHCDKPCLP-GHYGMGCARRCHCPAGT 981
Query: 181 -----EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 234
G C C PG TG C++ C N Y G++ ++C C + +C + G+C
Sbjct: 982 PCHHLTGECSCPPGFTGHGCEKTCPPNTY--GQSCSQACRC------RAEEDCHPITGRC 1033
Query: 235 ECKDNVEGAQC 245
C+ GAQC
Sbjct: 1034 VCRLGYHGAQC 1044
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 67/251 (26%), Positives = 99/251 (39%)
Query: 24 GHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G C C G +CE C ++ G+ C+C I S++ C+ + G C+C G
Sbjct: 902 GKC-QCSKGGTGTSCELACPPGFF---GERCEEQCDC--IHSVS--CHPQTGACRCAKGW 953
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKN--TPNCDSVKG----QCE-SAQLSSR 133
G CD+ C HY G A + C C PAG+ + T C G CE + ++
Sbjct: 954 RGRHCDKPCLPGHYGMGCA--RRCHC-PAGTPCHHLTGECSCPPGFTGHGCEKTCPPNTY 1010
Query: 134 GRVHTEL-RVQSRKNFDP-AGNRIWDL--------RRCKRDTYPLGHGGSLNLQCNS--- 180
G+ ++ R ++ ++ P G + L RRC TY G + +C +
Sbjct: 1011 GQSCSQACRCRAEEDCHPITGRCVCRLGYHGAQCDRRCPEGTY--GSNCQKSCKCMNGGH 1068
Query: 181 ----EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
G C C PG G C + C N Y G+ C C +CD G C
Sbjct: 1069 CDPVSGTCDCAPGFIGADCSKTCPENRY--GKDCALFCACGKG-------HCDPRTGSCT 1119
Query: 236 CKDNVEGAQCR 246
C G C+
Sbjct: 1120 CPPGQMGPGCQ 1130
Score = 136 (52.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 71/248 (28%), Positives = 91/248 (36%)
Query: 22 HGGHCLDCQGDRD-GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPG 80
H CLD D +CE C N + + +N + C C+P G + CN C G
Sbjct: 351 HRAVCLDNTFGNDCSLSCEDCM-NGGRCNSEN--SGCVCSP-GWTGIICNQT----CAQG 402
Query: 81 VTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS--VKG----QCES-AQLSS 132
GD C C + + C C P V+ P C+ +G C ++
Sbjct: 403 TYGDGCASICMCQNGGSCDPITGLCHCPPG--VQG-PFCEDGCPRGFFGKNCNKPCNCAN 459
Query: 133 RGRVHTELRVQSRKNFDPA-GNRIWDLRRCKRDTYPLGHGGSLNLQCNSE---------G 182
G H R+ DP R L C R + G G S QC E G
Sbjct: 460 SGHCH---RLYGACLCDPGLYGRFCHLT-CPR--WAFGVGCSQECQCVKEHTLGCSARNG 513
Query: 183 RCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE--CKDN 239
C CKPG G KC + C Y AGCK CN + V CD G C+ C
Sbjct: 514 TCSCKPGYHGKKCQKACTPGFYG---AGCK-LRCNCSTDVL----CDHETGACKRPCPPG 565
Query: 240 VEGAQCRS 247
G +C S
Sbjct: 566 FHGEKCHS 573
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 66/250 (26%), Positives = 94/250 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C C G +C+ C + + +N C ACN N GS C+ G C C+PG
Sbjct: 686 GECT-CPPGWTGHDCKHPCNSGRWGQHCENSC-ACN-NSDGS----CDPVTGSCFCEPGF 738
Query: 82 TGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
TG C+ RC FG + SC+C +N CD V G C S G T
Sbjct: 739 TGKHCEQRCPEG--SFGPSCMHSCQC------QNGAACDHVSGACTC----SAGWTGTFC 786
Query: 141 RVQSRKNFDPAG-NRIWDLRRCKRDTYPLG--------HGGSLNLQCNSE--GR-----C 184
R + F +++ + + + + LG G + C + G+ C
Sbjct: 787 RKACPEGFFGLDCHQVCNCKNAEGCDHVLGTCRCLPGWRGETCEQPCQGDRFGQGCAHTC 846
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP----AGSVKNT--PN---CDSVKGQCE 235
C G D +G A C+ C P AG ++ P CD V G+C+
Sbjct: 847 NCHNGALCDHITGTCACTPGWGGATCQEA-CPPGWHGAGCLQRCICPGQTACDPVTGKCQ 905
Query: 236 CKDNVEGAQC 245
C G C
Sbjct: 906 CSKGGTGTSC 915
Score = 109 (43.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 25/66 (37%), Positives = 30/66 (45%)
Query: 182 GRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C C+PG TG C+ RC FG + SC+C +N CD V G C C
Sbjct: 730 GSCFCEPGFTGKHCEQRCPEG--SFGPSCMHSCQC------QNGAACDHVSGACTCSAGW 781
Query: 241 EGAQCR 246
G CR
Sbjct: 782 TGTFCR 787
Score = 98 (39.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 182 GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C+C PG G+ C++ C + FG+ +C C+ N CD + G C C
Sbjct: 816 GTCRCLPGWRGETCEQPCQGDR--FGQGCAHTCNCH------NGALCDHITGTCACTPGW 867
Query: 241 EGAQCR 246
GA C+
Sbjct: 868 GGATCQ 873
Score = 66 (28.3 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 39 EKCRDNYYQKSGDNFCT-ACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDR 88
EKC + S C +C+C G+ C+ E GRC C G TG C+R
Sbjct: 569 EKCHSSCQPGSFGVDCRQSCSCG--GA---PCDPETGRCFCPAGKTGAMCER 615
>UNIPROTKB|Q9HCU4 [details] [associations]
symbol:CELSR2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0021591 "ventricular system development" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=NAS]
[GO:0021999 "neural plate anterior/posterior regionalization"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0022407 "regulation of cell-cell
adhesion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0007156 "homophilic
cell adhesion" evidence=ISS] [GO:0016055 "Wnt receptor signaling
pathway" evidence=ISS] [GO:0048813 "dendrite morphogenesis"
evidence=ISS] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00208 SMART:SM00303 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0005737 GO:GO:0001764 GO:GO:0006355
GO:GO:0016055 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
GO:GO:0007283 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0048813 PROSITE:PS01186 GO:GO:0022407
eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 OrthoDB:EOG4KKZ23
EMBL:AF234887 EMBL:AB065955 EMBL:AL390252 EMBL:D87469
IPI:IPI00015346 RefSeq:NP_001399.1 UniGene:Hs.57652
ProteinModelPortal:Q9HCU4 SMR:Q9HCU4 IntAct:Q9HCU4
MINT:MINT-1395407 STRING:Q9HCU4 MEROPS:I63.002 PhosphoSite:Q9HCU4
DMDM:22095550 PaxDb:Q9HCU4 PRIDE:Q9HCU4 Ensembl:ENST00000271332
GeneID:1952 KEGG:hsa:1952 UCSC:uc001dxa.4 CTD:1952
GeneCards:GC01P109792 HGNC:HGNC:3231 HPA:HPA013952 MIM:604265
neXtProt:NX_Q9HCU4 PharmGKB:PA26394 InParanoid:Q9HCU4 KO:K04601
OMA:YILRAYA ChiTaRS:CELSR2 GenomeRNAi:1952 NextBio:7911 Bgee:Q9HCU4
CleanEx:HS_CELSR2 Genevestigator:Q9HCU4 GermOnline:ENSG00000143126
GO:GO:0021999 Uniprot:Q9HCU4
Length = 2923
Score = 180 (68.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 42/99 (42%), Positives = 52/99 (52%)
Query: 21 GHGGH--CLDCQGD-RDG--PNCEK------CRDNYYQKSGDNFCTACNCNPIGSLNLQC 69
G GH C C D G P+C K C++N+Y+ G C C+C P GSL+ C
Sbjct: 1877 GWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKENHYRPPGSPTCLLCDCYPTGSLSRVC 1936
Query: 70 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 107
+ E G+C CKPGV G +CDRCD N F E CE N
Sbjct: 1937 DPEDGQCPCKPGVIGRQCDRCD-N--PFAEVTTNGCEVN 1972
Score = 149 (57.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 57/172 (33%), Positives = 72/172 (41%)
Query: 50 GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT-GDKCDRCDVNHYD-FGEAGC-KSCEC 106
GDN C+ NP C + C KP G C+ C N+ + E + C
Sbjct: 1825 GDNCTNVCDLNP-------CEHQSVCTRKPSAPHGYTCE-CPPNYLGPYCETRIDQPCPR 1876
Query: 107 NPAGSVKNTP-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
G P NCD KG +S G H + ++ P G+ L C D
Sbjct: 1877 GWWGHPTCGPCNCDVSKGFDPDCNKTS-GECHCK-----ENHYRPPGSPTCLL--C--DC 1926
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
YP G SL+ C+ E G+C CKPGV G +CDRCD N F E CE N
Sbjct: 1927 YPTG---SLSRVCDPEDGQCPCKPGVIGRQCDRCD-N--PFAEVTTNGCEVN 1972
Score = 140 (54.3 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 55/172 (31%), Positives = 68/172 (39%)
Query: 84 DKCDR--CDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQCESAQLSSR--GRVHT 138
D CD C N Y + SC C+P N N CD CE + +R H
Sbjct: 1795 DPCDSNPCPANSYCSNDWDSYSCSCDPGYYGDNCTNVCDL--NPCEHQSVCTRKPSAPHG 1852
Query: 139 ELRVQSRKNF-DP-AGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEG-RCQCKPGVTGDK 194
+ N+ P RI D + C R + GH C+ S+G C T +
Sbjct: 1853 -YTCECPPNYLGPYCETRI-D-QPCPRGWW--GHPTCGPCNCDVSKGFDPDCNK--TSGE 1905
Query: 195 CDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C C NHY G C C+C P GS+ CD GQC CK V G QC
Sbjct: 1906 C-HCKENHYRPPGSPTCLLCDCYPTGSLSRV--CDPEDGQCPCKPGVIGRQC 1954
Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
Identities = 35/108 (32%), Positives = 43/108 (39%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNCNPIGSLNLQCN-SEGRCQCK 78
HG C +C + GP CE D + G C CNC+ + CN + G C CK
Sbjct: 1851 HGYTC-ECPPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCK 1909
Query: 79 PGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
NHY G C C+C P GS+ CD GQC
Sbjct: 1910 E------------NHYRPPGSPTCLLCDCYPTGSLSRV--CDPEDGQC 1943
Score = 53 (23.7 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 28/90 (31%), Positives = 39/90 (43%)
Query: 1 CNCN-GFS-NRCFFDKEL-YNRT-GHGGHCLDCQGD-----RDGPNCEKCRDNYYQKSGD 51
C C GF+ + C + +L Y+R G G C +G RDG E C + +SG
Sbjct: 1274 CRCPPGFTGDYCETEVDLCYSRPCGPHGRCRSREGGYTCLCRDGYTGEHCEVS--ARSGR 1331
Query: 52 NFCTACNCNPIGS-LNLQCNSEGRCQCKPG 80
CT C G+ +NL +C C G
Sbjct: 1332 --CTPGVCKNGGTCVNLLVGGF-KCDCPSG 1358
Score = 41 (19.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 52 NFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKC 86
N C + C+ G+ Q ++ C+C G G C
Sbjct: 1576 NVCDSNTCHNGGTCVNQWDAFS-CECPLGFGGKSC 1609
>UNIPROTKB|F1PYQ8 [details] [associations]
symbol:MEGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 EMBL:AAEX03003878 EMBL:AAEX03003879
Ensembl:ENSCAFT00000030970 Uniprot:F1PYQ8
Length = 1573
Score = 177 (67.4 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 74/249 (29%), Positives = 95/249 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
G C C G +CE C N + G N C+C G L C+ S+G C C G
Sbjct: 1319 GSCA-CPPGTTGTHCEHGCPQNRF---GVNCEHVCSCRN-GGL---CHASDGSCSCGLGW 1370
Query: 82 TGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPN---CD-SVKGQ-CESA-QLSSR 133
TG C++ C HY A C+ C C G+ + T C GQ C+ A
Sbjct: 1371 TGPNCEQACPPGHYG---AACRLECSCQNNGTCEPTTGACRCGPGFYGQACQHACPPGFH 1427
Query: 134 GR-VHTELRVQSRKNFDP-AGNRIWDL----RRCKRDTYPLGHGGSLNLQCNSE------ 181
G Q + DP +G + + C++ P G C+ E
Sbjct: 1428 GAGCRAACECQHGASCDPVSGQCVCPAGFYGQLCEKGCEPGSFGEGCREHCDCEMGAACD 1487
Query: 182 ---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCECK 237
G+C C PG TG CD D DF GC C C G+ CD V GQC C
Sbjct: 1488 PITGQCLCPPGRTGATCD-LDCRP-DFFGPGCALRCSCG-GGAA-----CDPVSGQCRCV 1539
Query: 238 DNVEGAQCR 246
D G C+
Sbjct: 1540 DGYMGPTCQ 1548
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 76/270 (28%), Positives = 97/270 (35%)
Query: 1 CNCNGFSNRCF--FDKELYNRTGHGGHCLD-CQGDRDGPNCEKCRDNYYQKSGDNFCTAC 57
C+C G + C + HG C C R GP CE+ S D AC
Sbjct: 1219 CHCPGENQACHPALGTCVCAAGYHGSGCRQRCPPGRFGPGCEQPCGCLNGGSCDAATGAC 1278
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC-KSCECNPA-GSVKNT 115
C P G L C+ C G G C H GC ++ C+P GS
Sbjct: 1279 LC-PAGFLGADCS----LSCPQGHFGPGCA-----HV----CGCGQAVTCDPVTGSCACP 1324
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKN----FDPAGNRI----WDLRRCKRDTYP 167
P CE +R V+ E V S +N G+ W C++ P
Sbjct: 1325 PGTTGT--HCEHGCPQNRFGVNCE-HVCSCRNGGLCHASDGSCSCGLGWTGPNCEQ-ACP 1380
Query: 168 LGH-GGSLNLQCNSE---------GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CEC 215
GH G + L+C+ + G C+C PG G C C F AGC++ CEC
Sbjct: 1381 PGHYGAACRLECSCQNNGTCEPTTGACRCGPGFYGQACQHACPPG---FHGAGCRAACEC 1437
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
S CD V GQC C G C
Sbjct: 1438 QHGAS------CDPVSGQCVCPAGFYGQLC 1461
Score = 135 (52.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 66/252 (26%), Positives = 92/252 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACN---CNPIGSLNLQCNSEGRCQCKP 79
G CL C+ G C+ C ++ C+ N C+P+ G C C P
Sbjct: 801 GACL-CRPGYVGSRCQDTCPAGWFGPGCQMRCSCANDGLCHPV---------TGHCSCAP 850
Query: 80 GVTGDKCDR-CDVNHYDFGEAGCKSCECNPA-GS---VKNTPNCDS-VKG-QCESAQLSS 132
G TG C R CD + G C C+P GS V C++ G +CE Q
Sbjct: 851 GWTGLSCQRACDGGRW--GPDCSHPCTCSPGHGSCDAVSGLCVCEAGYTGPRCE--QRCP 906
Query: 133 RGRVHTELRVQSRKNFDPAGNRI---------WDLRRCKRDTYPLGHGG---------SL 174
+G Q + A + + W C+R P G G +
Sbjct: 907 QGHFGPGCGRQCQCEHGAACDHVSGACTCPAGWRGALCER-ACPAGFFGLDCRGVCDCAA 965
Query: 175 NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
C+S G C C G G +CD+ H +G ++C C N +CD V GQ
Sbjct: 966 GAPCDSVSGSCLCPAGRQGPRCDQACPAH-TYGHNCSQTCSCF------NGASCDPVHGQ 1018
Query: 234 CECKDNVEGAQC 245
C C G+ C
Sbjct: 1019 CHCGPGWMGSTC 1030
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 74/267 (27%), Positives = 92/267 (34%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNC-EKCR-DNYYQKSGDNFCTACNCN 60
C+ C D LY R H L C GP C E+C+ + + D +C+C
Sbjct: 620 CHRLYGACLCDPGLYGRFCH----LACPPWAFGPGCSEECQCEQQNTLACDRRDGSCSCK 675
Query: 61 PIGSLNLQCNSE---G--------RCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSC--EC 106
G +C E G C C GV D +C+ G G K C EC
Sbjct: 676 A-GFQGERCQDECAPGFFGPGCLQACTCPQGVACDPISGQCE-KQCPAGYQG-KGCDQEC 732
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI----WDLRRCK 162
PAG+ NC G C RV + K D G W L C+
Sbjct: 733 -PAGTFG--VNCS---GSCYCGGAPCN-RVTGQCLCPPGKTGDDCGADCPEGRWGLG-CQ 784
Query: 163 RDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKS-CECNPAG 219
HG + C G C C+PG G +C D C FG GC+ C C
Sbjct: 785 EICPACEHGAA----CEPGTGACLCRPGYVGSRCQDTCPAGW--FGP-GCQMRCSC---- 833
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQCR 246
N C V G C C G C+
Sbjct: 834 --ANDGLCHPVTGHCSCAPGWTGLSCQ 858
Score = 129 (50.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 61/206 (29%), Positives = 79/206 (38%)
Query: 50 GDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCK-SCEC 106
G N C C G+ C+ G C C G TG C+ C FG AGCK SC C
Sbjct: 1040 GQNCQHTCLCQHGGT----CDPVSGHCTCPEGWTGLACEEECLPGR--FG-AGCKHSCRC 1092
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
G +CD G+C L G T + QS G R + C+R
Sbjct: 1093 LNGG------DCDRRSGRC----LCPAG--WTGDQCQSLCAEGTFGVRCEEHCACRR--- 1137
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN-TP 225
G + + + G C C PG G +C+ H FGEA + C+C P + + T
Sbjct: 1138 ----GATCH---HVTGACLCPPGWRGSRCENA-CPHGWFGEACAQRCQCPPGAACHHVTG 1189
Query: 226 NCDSVKG----QCE--CKDNVEGAQC 245
C +G CE C G C
Sbjct: 1190 ECRCPRGFTGPGCEQACPPGTFGESC 1215
>UNIPROTKB|F1PYQ7 [details] [associations]
symbol:MEGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 OMA:RIEMEVI EMBL:AAEX03003878
EMBL:AAEX03003879 Ensembl:ENSCAFT00000030971 Uniprot:F1PYQ7
Length = 1604
Score = 177 (67.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 74/249 (29%), Positives = 95/249 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
G C C G +CE C N + G N C+C G L C+ S+G C C G
Sbjct: 1354 GSCA-CPPGTTGTHCEHGCPQNRF---GVNCEHVCSCRN-GGL---CHASDGSCSCGLGW 1405
Query: 82 TGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPN---CD-SVKGQ-CESA-QLSSR 133
TG C++ C HY A C+ C C G+ + T C GQ C+ A
Sbjct: 1406 TGPNCEQACPPGHYG---AACRLECSCQNNGTCEPTTGACRCGPGFYGQACQHACPPGFH 1462
Query: 134 GR-VHTELRVQSRKNFDP-AGNRIWDL----RRCKRDTYPLGHGGSLNLQCNSE------ 181
G Q + DP +G + + C++ P G C+ E
Sbjct: 1463 GAGCRAACECQHGASCDPVSGQCVCPAGFYGQLCEKGCEPGSFGEGCREHCDCEMGAACD 1522
Query: 182 ---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCECK 237
G+C C PG TG CD D DF GC C C G+ CD V GQC C
Sbjct: 1523 PITGQCLCPPGRTGATCD-LDCRP-DFFGPGCALRCSCG-GGAA-----CDPVSGQCRCV 1574
Query: 238 DNVEGAQCR 246
D G C+
Sbjct: 1575 DGYMGPTCQ 1583
Score = 149 (57.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 76/270 (28%), Positives = 97/270 (35%)
Query: 1 CNCNGFSNRCF--FDKELYNRTGHGGHCLD-CQGDRDGPNCEKCRDNYYQKSGDNFCTAC 57
C+C G + C + HG C C R GP CE+ S D AC
Sbjct: 1254 CHCPGENQACHPALGTCVCAAGYHGSGCRQRCPPGRFGPGCEQPCGCLNGGSCDAATGAC 1313
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC-KSCECNPA-GSVKNT 115
C P G L C+ C G G C H GC ++ C+P GS
Sbjct: 1314 LC-PAGFLGADCS----LSCPQGHFGPGCA-----HV----CGCGQAVTCDPVTGSCACP 1359
Query: 116 PNCDSVKGQCESAQLSSRGRVHTELRVQSRKN----FDPAGNRI----WDLRRCKRDTYP 167
P CE +R V+ E V S +N G+ W C++ P
Sbjct: 1360 PGTTGT--HCEHGCPQNRFGVNCE-HVCSCRNGGLCHASDGSCSCGLGWTGPNCEQ-ACP 1415
Query: 168 LGH-GGSLNLQCNSE---------GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CEC 215
GH G + L+C+ + G C+C PG G C C F AGC++ CEC
Sbjct: 1416 PGHYGAACRLECSCQNNGTCEPTTGACRCGPGFYGQACQHACPPG---FHGAGCRAACEC 1472
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
S CD V GQC C G C
Sbjct: 1473 QHGAS------CDPVSGQCVCPAGFYGQLC 1496
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 66/252 (26%), Positives = 92/252 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACN---CNPIGSLNLQCNSEGRCQCKP 79
G CL C+ G C+ C ++ C+ N C+P+ G C C P
Sbjct: 836 GACL-CRPGYVGSRCQDTCPAGWFGPGCQMRCSCANDGLCHPV---------TGHCSCAP 885
Query: 80 GVTGDKCDR-CDVNHYDFGEAGCKSCECNPA-GS---VKNTPNCDS-VKG-QCESAQLSS 132
G TG C R CD + G C C+P GS V C++ G +CE Q
Sbjct: 886 GWTGLSCQRACDGGRW--GPDCSHPCTCSPGHGSCDAVSGLCVCEAGYTGPRCE--QRCP 941
Query: 133 RGRVHTELRVQSRKNFDPAGNRI---------WDLRRCKRDTYPLGHGG---------SL 174
+G Q + A + + W C+R P G G +
Sbjct: 942 QGHFGPGCGRQCQCEHGAACDHVSGACTCPAGWRGALCER-ACPAGFFGLDCRGVCDCAA 1000
Query: 175 NLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
C+S G C C G G +CD+ H +G ++C C N +CD V GQ
Sbjct: 1001 GAPCDSVSGSCLCPAGRQGPRCDQACPAH-TYGHNCSQTCSCF------NGASCDPVHGQ 1053
Query: 234 CECKDNVEGAQC 245
C C G+ C
Sbjct: 1054 CHCGPGWMGSTC 1065
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 74/267 (27%), Positives = 92/267 (34%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNC-EKCR-DNYYQKSGDNFCTACNCN 60
C+ C D LY R H L C GP C E+C+ + + D +C+C
Sbjct: 655 CHRLYGACLCDPGLYGRFCH----LACPPWAFGPGCSEECQCEQQNTLACDRRDGSCSCK 710
Query: 61 PIGSLNLQCNSE---G--------RCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSC--EC 106
G +C E G C C GV D +C+ G G K C EC
Sbjct: 711 A-GFQGERCQDECAPGFFGPGCLQACTCPQGVACDPISGQCE-KQCPAGYQG-KGCDQEC 767
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI----WDLRRCK 162
PAG+ NC G C RV + K D G W L C+
Sbjct: 768 -PAGTFG--VNCS---GSCYCGGAPCN-RVTGQCLCPPGKTGDDCGADCPEGRWGLG-CQ 819
Query: 163 RDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKS-CECNPAG 219
HG + C G C C+PG G +C D C FG GC+ C C
Sbjct: 820 EICPACEHGAA----CEPGTGACLCRPGYVGSRCQDTCPAGW--FGP-GCQMRCSC---- 868
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQCR 246
N C V G C C G C+
Sbjct: 869 --ANDGLCHPVTGHCSCAPGWTGLSCQ 893
Score = 129 (50.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 61/206 (29%), Positives = 79/206 (38%)
Query: 50 GDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCK-SCEC 106
G N C C G+ C+ G C C G TG C+ C FG AGCK SC C
Sbjct: 1075 GQNCQHTCLCQHGGT----CDPVSGHCTCPEGWTGLACEEECLPGR--FG-AGCKHSCRC 1127
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
G +CD G+C L G T + QS G R + C+R
Sbjct: 1128 LNGG------DCDRRSGRC----LCPAG--WTGDQCQSLCAEGTFGVRCEEHCACRR--- 1172
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN-TP 225
G + + + G C C PG G +C+ H FGEA + C+C P + + T
Sbjct: 1173 ----GATCH---HVTGACLCPPGWRGSRCENA-CPHGWFGEACAQRCQCPPGAACHHVTG 1224
Query: 226 NCDSVKG----QCE--CKDNVEGAQC 245
C +G CE C G C
Sbjct: 1225 ECRCPRGFTGPGCEQACPPGTFGESC 1250
Score = 95 (38.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 43/173 (24%), Positives = 68/173 (39%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNL-QC--NSEGRCQCKPGVTGDKCDRCDVNHYDF 96
+C + Q+ G+ C + C+ N C S C C G G +C + DVN
Sbjct: 102 RCCPGWSQQPGEQGCLSPQCSTGLCFNGGHCVPGSAQLCYCPRGFQGPRC-QYDVNECAS 160
Query: 97 GEAGCKS----------CECNPAG--------SVKNTPNCDSVKGQCESAQLSSRGRVHT 138
G GC+ C C PAG + ++ C G C+ +++ G
Sbjct: 161 GNGGCEDQCYNTVGGFYCRC-PAGHQLQGDGRTCQDVDECQLHNGGCQQRCVNTPGSYLC 219
Query: 139 ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--LQCN-SEGRCQCKP 188
E + R + D G + C LG+GG + +Q ++ RCQC+P
Sbjct: 220 ECKPGFRLHAD--GRTCLAINSCA-----LGNGGCQHECVQLTVTQHRCQCRP 265
Score = 86 (35.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/63 (34%), Positives = 27/63 (42%)
Query: 184 CQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C G TG C+ C + FG+ SC C G+ CD V G C C V G
Sbjct: 576 CDCPEGWTGLICNETCPPD--TFGKNCSLSCGCQNGGT------CDPVTGACRCPPGVGG 627
Query: 243 AQC 245
+C
Sbjct: 628 TRC 630
>UNIPROTKB|F1MER7 [details] [associations]
symbol:HSPG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0048738 "cardiac muscle
tissue development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005615 GO:GO:0008104 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GeneTree:ENSGT00530000063501 InterPro:IPR013098 Pfam:PF07679
GO:GO:0048704 GO:GO:0002062 GO:GO:0001958 Pfam:PF02210
GO:GO:0060351 Pfam:PF12661 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 OMA:GVTQQCA
EMBL:DAAA02006470 EMBL:DAAA02006471 IPI:IPI01000857 IntAct:F1MER7
Ensembl:ENSBTAT00000022744 Uniprot:F1MER7
Length = 4374
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 60/212 (28%), Positives = 92/212 (43%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVTG 83
C GP+C+ C Y + + C C+C+ G + C E G CQ C+ G
Sbjct: 1107 CPPGYRGPSCQDCDAGYTRMPSGLYLGTCERCSCH--GHTEV-CEPETGACQECQHHTEG 1163
Query: 84 DKCDRCDVNHYDFGEAG----CKSCECN--PA-GSVKNTPNCDSVKGQ--CESAQLSSRG 134
+C++C +Y + G C+ C C+ PA G +T D+ G C++ G
Sbjct: 1164 PRCEQCQPGYYGDAQRGTPHDCQPCPCHGAPAAGQATHTCFLDT-DGHPTCDACSPGHSG 1222
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRD--TYP--LGHG----GSLNLQCNSEGRCQC 186
R H E R +P+ + C+R P +G G GS++ QC+ G+CQC
Sbjct: 1223 R-HCE-RCAPGYYGNPSQGQ-----PCRRSGGQLPEQIGCGCDPQGSVSNQCDPAGQCQC 1275
Query: 187 KPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
K V G C +C +H+ + GC C C
Sbjct: 1276 KAQVEGLTCSQCRPHHFHLSASNPDGCLPCFC 1307
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 55/191 (28%), Positives = 75/191 (39%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA---G-CKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+C C PG G C CD + G C+ C C+ G +T C+ G C+ Q
Sbjct: 1104 QCACPPGYRGPSCQDCDAGYTRMPSGLYLGTCERCSCH--G---HTEVCEPETGACQECQ 1158
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR--CQ-C 186
+ G E + Q D D + C P + +++G C C
Sbjct: 1159 HHTEGP-RCE-QCQPGYYGDAQRGTPHDCQPCPCHGAPAAGQATHTCFLDTDGHPTCDAC 1216
Query: 187 KPGVTGDKCDRCDVNHYDFGEAG--CK----------SCECNPAGSVKNTPNCDSVKGQC 234
PG +G C+RC +Y G C+ C C+P GSV N CD GQC
Sbjct: 1217 SPGHSGRHCERCAPGYYGNPSQGQPCRRSGGQLPEQIGCGCDPQGSVSN--QCDPA-GQC 1273
Query: 235 ECKDNVEGAQC 245
+CK VEG C
Sbjct: 1274 QCKAQVEGLTC 1284
Score = 153 (58.9 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 39/126 (30%), Positives = 56/126 (44%)
Query: 1 CNCNGF------SNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-------- 46
C C+G ++ CF D + GH C C G +CE+C YY
Sbjct: 1188 CPCHGAPAAGQATHTCFLDTD-----GHPT-CDACSPGHSGRHCERCAPGYYGNPSQGQP 1241
Query: 47 -QKSGDNFCT--ACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---G 100
++SG C C+P GS++ QC+ G+CQCK V G C +C +H+ + G
Sbjct: 1242 CRRSGGQLPEQIGCGCDPQGSVSNQCDPAGQCQCKAQVEGLTCSQCRPHHFHLSASNPDG 1301
Query: 101 CKSCEC 106
C C C
Sbjct: 1302 CLPCFC 1307
Score = 146 (56.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 41/139 (29%), Positives = 62/139 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
CNCNG ++ C D +Y GHCL+CQ + +GP C KC+ ++ K+ C C
Sbjct: 743 CNCNGHASSC--DP-VY------GHCLNCQHNTEGPQCNKCKAGFFGDATKATATACRPC 793
Query: 58 NCNPIGSLN-------LQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
C I + L + + C C PG TG +C+ C Y+ G + +C P
Sbjct: 794 PCPYIDASRRFSDTCFLDTDGQATCDACAPGYTGRRCESCAAG-YE-GNPIQPNGKCRPI 851
Query: 110 GSVKNTPNCDSVKGQCESA 128
+ CD +G S+
Sbjct: 852 N--QQIVRCDE-RGSTGSS 867
Score = 141 (54.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 44/153 (28%), Positives = 66/153 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTAC 57
C+C+G + C + E G C +CQ +GP CE+C+ YY Q+ + C C
Sbjct: 1138 CSCHGHTEVC--EPET-------GACQECQHHTEGPRCEQCQPGYYGDAQRGTPHDCQPC 1188
Query: 58 NCN--PI-GSLNLQC--NSEGR--CQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPA 109
C+ P G C +++G C C PG +G C+RC +Y G + C
Sbjct: 1189 PCHGAPAAGQATHTCFLDTDGHPTCDACSPGHSGRHCERCAPGYYGNPSQG-QPCR-RSG 1246
Query: 110 GSVKNTPNCD-----SVKGQCESA-QLSSRGRV 136
G + C SV QC+ A Q + +V
Sbjct: 1247 GQLPEQIGCGCDPQGSVSNQCDPAGQCQCKAQV 1279
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 52/217 (23%), Positives = 82/217 (37%)
Query: 20 TGHG-GHCLD---CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE 72
T HG H ++ C G +CE C ++ + G + C+ CNCN S C+
Sbjct: 699 TSHGRAHSVEECRCPIGYSGLSCESCDAHFTRVPGGPYLGTCSGCNCNGHAS---SCDPV 755
Query: 73 -GRC-QCKPGVTGDKCDRCDVNHY-DFGEA---GCKSCECNPAGSVKN-TPNCD-SVKGQ 124
G C C+ G +C++C + D +A C+ C C + + + C GQ
Sbjct: 756 YGHCLNCQHNTEGPQCNKCKAGFFGDATKATATACRPCPCPYIDASRRFSDTCFLDTDGQ 815
Query: 125 --CESAQLSSRGRVHTELRVQS-RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE 181
C++ GR R +S ++ GN I +C+ + +S
Sbjct: 816 ATCDACAPGYTGR-----RCESCAAGYE--GNPIQPNGKCRPINQQIVRCDERGSTGSSG 868
Query: 182 GRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 215
C CK V G C+ C + GC C C
Sbjct: 869 EACLCKNNVVGRLCNECVAGSFHLSARNPDGCLKCFC 905
Score = 126 (49.4 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 35/100 (35%), Positives = 43/100 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGD-NFCTAC 57
C CNG S+ C + TG C CQ G CE+C YY +G C C
Sbjct: 1543 CECNGHSDLC------HPETGA---CSQCQHHAAGEFCEQCAPGYYGDATAGTPEDCQPC 1593
Query: 58 NC---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRC 89
C NP + C S G RC C+PG TG C++C
Sbjct: 1594 ACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQC 1633
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 47/190 (24%), Positives = 71/190 (37%)
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVK 122
+ +S C+C G +G C+ CD H+ G C C CN S +CD V
Sbjct: 703 RAHSVEECRCPIGYSGLSCESCDA-HFTRVPGGPYLGTCSGCNCNGHAS-----SCDPVY 756
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG 182
G C + Q ++ G + + + A C + L + +
Sbjct: 757 GHCLNCQHNTEGPQCNKCKAGFFGDATKATATACRPCPCPYIDASRRFSDTCFLDTDGQA 816
Query: 183 RCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS-----VKGQ-CE 235
C C PG TG +C+ C Y+ G + +C P + CD G+ C
Sbjct: 817 TCDACAPGYTGRRCESCAAG-YE-GNPIQPNGKCRPIN--QQIVRCDERGSTGSSGEACL 872
Query: 236 CKDNVEGAQC 245
CK+NV G C
Sbjct: 873 CKNNVVGRLC 882
Score = 82 (33.9 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 20/67 (29%), Positives = 27/67 (40%)
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEA---G-CKSCECNPAGSVKNTPNCDSVKGQC-ECKD 238
C+C PG G C C + G G C+ CECN + C G C +C+
Sbjct: 1510 CRCPPGYVGSSCQDCAPGYTRTGSGLYLGHCELCECNGHSDL-----CHPETGACSQCQH 1564
Query: 239 NVEGAQC 245
+ G C
Sbjct: 1565 HAAGEFC 1571
Score = 80 (33.2 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 24/81 (29%), Positives = 35/81 (43%)
Query: 178 CNSE-GRC-QCKPGVTGDKCDRCDVNHYDFGEAG----CKSCEC---NPAGSVKNTPNCD 228
C+ E G C QC+ G+ C++C +Y AG C+ C C NP T C+
Sbjct: 1552 CHPETGACSQCQHHAAGEFCEQCAPGYYGDATAGTPEDCQPCACPLTNPENMFSRT--CE 1609
Query: 229 SVKG---QCE-CKDNVEGAQC 245
S+ +C C+ G C
Sbjct: 1610 SLGAGGYRCTACEPGYTGQYC 1630
Score = 77 (32.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 36/128 (28%), Positives = 45/128 (35%)
Query: 123 GQCESAQLSSR--GRVHTELRVQSRKN-FDPAGNRIWDLRRCK--RDTYPLGHGGSLNLQ 177
G A LSS G V ELR+Q + F + C RD P +GG
Sbjct: 3788 GAIPKAGLSSGFIGCVR-ELRIQGEEIVFHDLNLTAHGISHCPTCRDR-PCQNGGQCQDS 3845
Query: 178 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+S C C G TG +C+ H C C P + N P D C C
Sbjct: 3846 ESSSYVCVCPAGFTGSRCEHSQALH-------CHPEACGPDATCVNRP--DGHGYTCRCH 3896
Query: 238 DNVEGAQC 245
G +C
Sbjct: 3897 LGRSGMRC 3904
Score = 72 (30.4 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 26/96 (27%), Positives = 38/96 (39%)
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR----CDVNHYDFGEAGCK 211
+D C+R P HG + E +C C+ G GD C+ C ++ C+
Sbjct: 4086 YDSSPCERQ--PCRHGATCMPAGEYEFQCLCRDGFKGDLCEHEENPCQLHEPCLHGGTCQ 4143
Query: 212 S--CECNPAGSVKNTPNCD--SVKGQCECKDNVEGA 243
C C P S P C S G E ++EG+
Sbjct: 4144 GTHCLCPPGFS---GPRCQHSSAHGLVESDWHLEGS 4176
Score = 44 (20.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/77 (24%), Positives = 27/77 (35%)
Query: 175 NLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG---C---KSCECNPAGSVKNTPNCD 228
N+ + G C + V G R D+ + G G C CE P
Sbjct: 4051 NVSAHFHG-CVGEVSVNGK---RLDLTYSFLGSQGVGQCYDSSPCERQPCRHGATCMPAG 4106
Query: 229 SVKGQCECKDNVEGAQC 245
+ QC C+D +G C
Sbjct: 4107 EYEFQCLCRDGFKGDLC 4123
>UNIPROTKB|D4AA94 [details] [associations]
symbol:Megf6 "Multiple epidermal growth factor-like domains
protein 6" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:621188
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
OrthoDB:EOG4CZBF1 IPI:IPI00776570 ProteinModelPortal:D4AA94
Ensembl:ENSRNOT00000055386 Uniprot:D4AA94
Length = 1193
Score = 175 (66.7 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 75/266 (28%), Positives = 106/266 (39%)
Query: 5 GFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNP 61
G S C ++ + R+ + G C C+ G C+ +C ++ G C C P
Sbjct: 544 GCSEDCLCEQS-HTRSCNPKDGSC-SCKAGFQGERCQAECESGFF---GPGCRHRCTCQP 598
Query: 62 IGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
G + E R QC PG G+ C + C V + +G SC P V C
Sbjct: 599 -GVACDPVSGECRTQCPPGYQGEDCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPP 657
Query: 121 VK-GQ-CESAQLSSR-GRVHTEL--RVQSRKNFDPAGNRIWDL-----RRCKRDTYPLG- 169
K G+ C + R G E+ + + +P L RC+ DT G
Sbjct: 658 GKTGEDCGADCPEGRWGLGCQEICPACEHGASCNPETGTCLCLPGFVGSRCQ-DTCSAGW 716
Query: 170 HGGSLNLQC---N------SEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAG 219
+G ++C N + GRC C PG TG C R CD H+ G C C+ AG
Sbjct: 717 YGTGCQIRCACANDGHCDPTTGRCSCAPGWTGLSCQRACDSGHW--GPDCIHPCNCS-AG 773
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
NCD+V G C C+ EG +C
Sbjct: 774 H----GNCDAVSGLCLCEAGYEGPRC 795
Score = 158 (60.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 74/270 (27%), Positives = 103/270 (38%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTA--- 56
CNC+ C G CL C+ +GP CE+ CR YY S + C
Sbjct: 768 CNCSAGHGNC---------DAVSGLCL-CEAGYEGPRCEQSCRQGYYGPSCEQKCRCEHG 817
Query: 57 CNCNPI-GSLNLQCNSEGR-CQ--CKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGS 111
C+ + G+ G C+ C G G CD C+ + +A SC C PAG
Sbjct: 818 AACDHVSGACTCPAGWRGSFCEHACPAGFFGLDCDSACNCSAGAPCDAVTGSCIC-PAG- 875
Query: 112 VKNTPNCDS--VKGQ-CESAQLSSRGRVHTELRVQSRKN-FDPAGNRIWDLRRCKRDTYP 167
+ P C + G QL+ +H + + + PAG W +C+ + P
Sbjct: 876 -RWGPRCAQKCLPGHYAAGCQLNC-SCLHGGICDRLTGHCLCPAG---WTGDKCQ-SSCP 929
Query: 168 LGHGGSL---------NLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CEC 215
G G N C+ G C+C PG TG C++ C Y GC+ C+C
Sbjct: 930 RGWFGEACAQRCLCPPNASCHHVTGECRCPPGFTGLSCEQGCPSGRYG---PGCEHICKC 986
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ CD G C C GA C
Sbjct: 987 LNGGT------CDPATGACYCPAGFLGADC 1010
Score = 155 (59.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 76/267 (28%), Positives = 95/267 (35%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNC-EKCR-DNYYQKSGDNFCTACNCN 60
C+ C D LY R H L C GP C E C + + +S + +C+C
Sbjct: 514 CHRLYGACLCDPGLYGRFCH----LACPPWAFGPGCSEDCLCEQSHTRSCNPKDGSCSCK 569
Query: 61 PIGSLNLQCNSE---G--------RCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSC--EC 106
G +C +E G RC C+PGV D C G G + C EC
Sbjct: 570 A-GFQGERCQAECESGFFGPGCRHRCTCQPGVACDPVSGECRTQCPP-GYQG-EDCGQEC 626
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI----WDLRRCK 162
P G+ NC G C RV E K + G W L C+
Sbjct: 627 -PVGTFG--VNCS---GSCSCVGAPCH-RVTGECLCPPGKTGEDCGADCPEGRWGLG-CQ 678
Query: 163 RDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCK-SCECNPAG 219
HG S CN E G C C PG G +C D C Y GC+ C C
Sbjct: 679 EICPACEHGAS----CNPETGTCLCLPGFVGSRCQDTCSAGWYG---TGCQIRCAC---- 727
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQCR 246
N +CD G+C C G C+
Sbjct: 728 --ANDGHCDPTTGRCSCAPGWTGLSCQ 752
Score = 143 (55.4 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 69/250 (27%), Positives = 89/250 (35%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G CL C + G +C C + + C AC G+ CN E G C C PG
Sbjct: 651 GECL-CPPGKTGEDCGADCPEGRWGLGCQEICPACEH---GA---SCNPETGTCLCLPGF 703
Query: 82 TGDKC-DRCDVNHYDFGEAGCK-SCEC-NPAGSVKNTPNCDSVKG----QCESAQLSSR- 133
G +C D C Y GC+ C C N T C G C+ A S
Sbjct: 704 VGSRCQDTCSAGWYG---TGCQIRCACANDGHCDPTTGRCSCAPGWTGLSCQRACDSGHW 760
Query: 134 GR--VHTELRVQSRKNFDPAGNRI-----WDLRRCKRDTYPLGHGGSLNLQCNSE----- 181
G +H N D ++ RC++ +G S +C E
Sbjct: 761 GPDCIHPCNCSAGHGNCDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCEQKCRCEHGAAC 820
Query: 182 ----GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCE 235
G C C G G C+ C FG C S C C+ AG+ P CD+V G C
Sbjct: 821 DHVSGACTCPAGWRGSFCEHACPAGF--FG-LDCDSACNCS-AGA----P-CDAVTGSCI 871
Query: 236 CKDNVEGAQC 245
C G +C
Sbjct: 872 CPAGRWGPRC 881
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 71/252 (28%), Positives = 97/252 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
G CL C G C+ C +Y G C C G C+ + GRC C PG
Sbjct: 695 GTCL-CLPGFVGSRCQDTCSAGWY---GTGCQIRCACANDG----HCDPTTGRCSCAPGW 746
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPAG-----SVKNTPNCDS-VKG-QCE-SAQLSS 132
TG C R CD H+ G C C+ AG +V C++ +G +CE S +
Sbjct: 747 TGLSCQRACDSGHW--GPDCIHPCNCS-AGHGNCDAVSGLCLCEAGYEGPRCEQSCRQGY 803
Query: 133 RG-RVHTELRVQSRKNFD--------PAGNR-IWDLRRCKRDTYPLGHGGSLNLQ----C 178
G + R + D PAG R + C + L + N C
Sbjct: 804 YGPSCEQKCRCEHGAACDHVSGACTCPAGWRGSFCEHACPAGFFGLDCDSACNCSAGAPC 863
Query: 179 NS-EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCE 235
++ G C C G G +C +C HY AGC+ +C C G CD + G C
Sbjct: 864 DAVTGSCICPAGRWGPRCAQKCLPGHY---AAGCQLNCSCLHGGI------CDRLTGHCL 914
Query: 236 CKDNVEGAQCRS 247
C G +C+S
Sbjct: 915 CPAGWTGDKCQS 926
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 66/243 (27%), Positives = 86/243 (35%)
Query: 29 CQGDRDGPNCE---KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDK 85
C R GP CE KC + + D AC C P G L C+ C G G
Sbjct: 971 CPSGRYGPGCEHICKCLNG---GTCDPATGACYC-PAGFLGADCS----LACPQGRFGPS 1022
Query: 86 CDR-CDVNHYDFGEAGCKSCECNPAGS-VKNTPNCDSVK-GQ-CE-SAQLSSRGRVHTEL 140
C C + +C C+P + V+ C + G+ CE + G H
Sbjct: 1023 CAHVCACRQGAACDPVSGACICSPGKTGVRCEHGCPQDRFGKGCELKCACRNGGLCHATN 1082
Query: 141 RVQSRKNFDPAGNRIWDLRRCKRDTYPLG-HGGSLNLQC---NS------EGRCQCKPGV 190
S P G W C+ P G +G + L+C N+ G C C PG
Sbjct: 1083 GSCSC----PLG---WMGPHCEH-ACPAGRYGAACLLECFCQNNGSCEPTTGACLCGPGF 1134
Query: 191 TGDKCDRCDVN-------HYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
G C+ C+ F GC+ CEC + P CD V GQC C G
Sbjct: 1135 YGQACEHCEWGCPLPLSCPSGFHGPGCQRVCECQ-----QGAP-CDPVSGQCLCPAGFHG 1188
Query: 243 AQC 245
C
Sbjct: 1189 QFC 1191
Score = 92 (37.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 34/108 (31%), Positives = 43/108 (39%)
Query: 21 GHGGHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCK 78
G G C DC G C E C + + G N + C C G+ C+ G C+C
Sbjct: 431 GQDG-C-DCPEGWTGIICNETCPPDTF---GKNCSSPCTCQNGGT----CDPVLGACRCP 481
Query: 79 PGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
PGV+G C D C Y G+ K C C N C + G C
Sbjct: 482 PGVSGAHCEDGCPKGFY--GKHCRKKCHC------ANRGRCHRLYGAC 521
Score = 92 (37.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 30/90 (33%), Positives = 36/90 (40%)
Query: 166 YPLGHGGSLNLQ-CNSEGRC-------QCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CEC 215
+ GH SL C + G C C G TG C+ C + FG+ C S C C
Sbjct: 409 HSFGHDCSLTCDDCRNGGTCFPGQDGCDCPEGWTGIICNETCPPD--TFGK-NCSSPCTC 465
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ CD V G C C V GA C
Sbjct: 466 QNGGT------CDPVLGACRCPPGVSGAHC 489
Score = 91 (37.1 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 182 GRCQCKPGVTGDKCD-RCDVNHYDFGEAGC-KSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C C PG+ G C C + FG GC + C C + +T +C+ G C CK
Sbjct: 519 GACLCDPGLYGRFCHLACPP--WAFGP-GCSEDCLCEQS----HTRSCNPKDGSCSCKAG 571
Query: 240 VEGAQCRS 247
+G +C++
Sbjct: 572 FQGERCQA 579
Score = 88 (36.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 22/65 (33%), Positives = 27/65 (41%)
Query: 182 GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C+C PGV+G C D C Y G+ K C C N C + G C C +
Sbjct: 476 GACRCPPGVSGAHCEDGCPKGFY--GKHCRKKCHC------ANRGRCHRLYGACLCDPGL 527
Query: 241 EGAQC 245
G C
Sbjct: 528 YGRFC 532
Score = 76 (31.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 31/112 (27%), Positives = 41/112 (36%)
Query: 9 RCF-FDKELYN--RTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN-CNPIGS 64
+C+ + E+ N G+GG C GP C C Y C + C
Sbjct: 217 QCYRIEMEIVNSCEAGNGGCSHGCSHTSTGPLCT-CPRGYELDEDQKTCIDIDDCANSPC 275
Query: 65 LNLQC-NSEG--RCQCKPG--VTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
C N+ G C C G + D C DV+ G GC+ N AGS
Sbjct: 276 CQQACANTPGGYECSCFAGYRLNTDGCGCEDVDECASGHGGCEHHCSNLAGS 327
>ZFIN|ZDB-GENE-030131-1033 [details] [associations]
symbol:agrn "agrin" species:7955 "Danio rerio"
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043113 "receptor
clustering" evidence=IEA] [GO:0007213 "G-protein coupled
acetylcholine receptor signaling pathway" evidence=IEA] [GO:0043236
"laminin binding" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 ZFIN:ZDB-GENE-030131-1033 GO:GO:0009952 GO:GO:0007422
GO:GO:0007417 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
GO:GO:0007409 PROSITE:PS01186 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 InterPro:IPR011497
EMBL:EU716327 IPI:IPI00897584 RefSeq:NP_001170923.1
UniGene:Dr.44162 ProteinModelPortal:B3GQ72 GeneID:565373
KEGG:dre:565373 eggNOG:NOG291045 NextBio:20885851 Uniprot:B3GQ72
Length = 2028
Score = 176 (67.0 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 170 HGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF------GEAGCKSCECNPAGSVK 222
H GS C+ S G+C CKPGV G KCDRC+ ++F +GC C C+ GSV+
Sbjct: 795 HYGSYGGTCDPSTGQCSCKPGVGGLKCDRCEPGFWNFRGIVTENMSGCTPCNCDGLGSVR 854
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
+ +C+ + G C CK V+G +C
Sbjct: 855 D--DCEQMSGLCSCKPGVKGMKC 875
Score = 172 (65.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 57/211 (27%), Positives = 89/211 (42%)
Query: 41 CRDNYYQKSGDNF--CTA-CNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDF 96
C DN G C + C CN GS C+ S G+C CKPGV G KCDRC+ ++F
Sbjct: 772 CEDNKTAALGVGLAGCPSMCQCNHYGSYGGTCDPSTGQCSCKPGVGGLKCDRCEPGFWNF 831
Query: 97 ------GEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDP 150
+GC C C+ GSV++ +C+ + G C S + +G S+ +
Sbjct: 832 RGIVTENMSGCTPCNCDGLGSVRD--DCEQMSGLC-SCKPGVKGMKCNVCPDGSKMGVNG 888
Query: 151 AGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 210
+ C + H GS ++ N + C+C P D+ ++ V D G
Sbjct: 889 CDKGPKAPKSCAE---LVCHFGSSCVEVNGQAHCEC-PSPDCDEKNKTKVCGSD-GVTYA 943
Query: 211 KSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
C+ ++ GQC K+++E
Sbjct: 944 DRCQLKTIACRQDKEIKVEHLGQC--KESIE 972
Score = 149 (57.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 37/122 (30%), Positives = 54/122 (44%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSG---DNF--CTACNCNPIGSLNLQCNS-EGRCQC 77
G C C+ G C++C ++ G +N CT CNC+ +GS+ C G C C
Sbjct: 808 GQC-SCKPGVGGLKCDRCEPGFWNFRGIVTENMSGCTPCNCDGLGSVRDDCEQMSGLCSC 866
Query: 78 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVH 137
KPGV G KC+ C D + G C+ P K +C + S+ + G+ H
Sbjct: 867 KPGVKGMKCNVCP----DGSKMGVNGCDKGP----KAPKSCAELVCHFGSSCVEVNGQAH 918
Query: 138 TE 139
E
Sbjct: 919 CE 920
Score = 56 (24.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKC 195
C +D +GG N Q NS C C+ G +G C
Sbjct: 1804 CSKDVCE--NGGRCNPQLNSY-ECACRHGFSGHHC 1835
Score = 55 (24.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 20/79 (25%), Positives = 30/79 (37%)
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
P +G S ++ C+C G +G C D ++ C +C+P + P
Sbjct: 1545 PCKNGASCQVKEAEIFHCKCVNGFSGPTC--ADAHN------PCDPNKCHPPSRCQVLPE 1596
Query: 227 CDSVKGQCECKDNVEGAQC 245
K CEC EG C
Sbjct: 1597 -GGYK--CECPMGREGRHC 1612
Score = 50 (22.7 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQ---CECKDNVEGAQC 245
GE G C NP KN +C + + C+C + G C
Sbjct: 1534 GECGNNPCLPNPC---KNGASCQVKEAEIFHCKCVNGFSGPTC 1573
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 183 RCQCKPGVTGDKCDR 197
+C+C G G C++
Sbjct: 1600 KCECPMGREGRHCEK 1614
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 9/37 (24%), Positives = 14/37 (37%)
Query: 210 CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C C G + P +S +C C+ G C+
Sbjct: 1804 CSKDVCENGG--RCNPQLNSY--ECACRHGFSGHHCQ 1836
>RGD|621188 [details] [associations]
symbol:Megf6 "multiple EGF-like-domains 6" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:621188
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662
CTD:1953 HOGENOM:HOG000097840 HOVERGEN:HBG079790 EMBL:AB011532
IPI:IPI00207575 PIR:T13954 RefSeq:NP_075244.1 UniGene:Rn.195598
ProteinModelPortal:O88281 PRIDE:O88281 GeneID:65049 KEGG:rno:65049
UCSC:RGD:621188 InParanoid:O88281 NextBio:613892
Genevestigator:O88281 Uniprot:O88281
Length = 1574
Score = 175 (66.7 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 75/266 (28%), Positives = 106/266 (39%)
Query: 5 GFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNP 61
G S C ++ + R+ + G C C+ G C+ +C ++ G C C P
Sbjct: 653 GCSEDCLCEQS-HTRSCNPKDGSC-SCKAGFQGERCQAECESGFF---GPGCRHRCTCQP 707
Query: 62 IGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
G + E R QC PG G+ C + C V + +G SC P V C
Sbjct: 708 -GVACDPVSGECRTQCPPGYQGEDCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPP 766
Query: 121 VK-GQ-CESAQLSSR-GRVHTEL--RVQSRKNFDPAGNRIWDL-----RRCKRDTYPLG- 169
K G+ C + R G E+ + + +P L RC+ DT G
Sbjct: 767 GKTGEDCGADCPEGRWGLGCQEICPACEHGASCNPETGTCLCLPGFVGSRCQ-DTCSAGW 825
Query: 170 HGGSLNLQC---N------SEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAG 219
+G ++C N + GRC C PG TG C R CD H+ G C C+ AG
Sbjct: 826 YGTGCQIRCACANDGHCDPTTGRCSCAPGWTGLSCQRACDSGHW--GPDCIHPCNCS-AG 882
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
NCD+V G C C+ EG +C
Sbjct: 883 H----GNCDAVSGLCLCEAGYEGPRC 904
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 72/248 (29%), Positives = 91/248 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C+ C + G CE C + + K + C AC N G L C++ G C C G
Sbjct: 1322 GACI-CSPGKTGVRCEHGCPQDRFGKGCELKC-ACR-N--GGL---CHATNGSCSCPLGW 1373
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPN---CD-SVKGQ-CE-SAQLSSRG 134
G C+ C Y G A C C GS + T C GQ CE S G
Sbjct: 1374 MGPHCEHACPAGRY--GAACLLECFCQNNGSCEPTTGACLCGPGFYGQACEHSCPSGFHG 1431
Query: 135 R-VHTELRVQSRKNFDPAGNRI-----WDLRRCKRDTYPLGHGGSLNLQCNSE------- 181
Q DP + + + C++ G QCN
Sbjct: 1432 PGCQRVCECQQGAPCDPVSGQCLCPAGFHGQFCEKGCESGSFGDGCLQQCNCHTGVPCDP 1491
Query: 182 --GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCECKD 238
G C C PG TG CD D FG GC C+C G+ +CD + GQC C D
Sbjct: 1492 ISGLCLCPPGRTGAACD-LDCRRGRFGP-GCALRCDCG-GGA-----DCDPISGQCHCVD 1543
Query: 239 NVEGAQCR 246
+ G CR
Sbjct: 1544 SYMGPTCR 1551
Score = 155 (59.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 76/267 (28%), Positives = 95/267 (35%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNC-EKCR-DNYYQKSGDNFCTACNCN 60
C+ C D LY R H L C GP C E C + + +S + +C+C
Sbjct: 623 CHRLYGACLCDPGLYGRFCH----LACPPWAFGPGCSEDCLCEQSHTRSCNPKDGSCSCK 678
Query: 61 PIGSLNLQCNSE---G--------RCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSC--EC 106
G +C +E G RC C+PGV D C G G + C EC
Sbjct: 679 A-GFQGERCQAECESGFFGPGCRHRCTCQPGVACDPVSGECRTQCPP-GYQG-EDCGQEC 735
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI----WDLRRCK 162
P G+ NC G C RV E K + G W L C+
Sbjct: 736 -PVGTFG--VNCS---GSCSCVGAPCH-RVTGECLCPPGKTGEDCGADCPEGRWGLG-CQ 787
Query: 163 RDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCK-SCECNPAG 219
HG S CN E G C C PG G +C D C Y GC+ C C
Sbjct: 788 EICPACEHGAS----CNPETGTCLCLPGFVGSRCQDTCSAGWYG---TGCQIRCAC---- 836
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQCR 246
N +CD G+C C G C+
Sbjct: 837 --ANDGHCDPTTGRCSCAPGWTGLSCQ 861
Score = 146 (56.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 68/253 (26%), Positives = 97/253 (38%)
Query: 21 GHG------GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTA---CNCNPI-GSLNLQC 69
GHG G CL C+ +GP CE+ CR YY S + C C+ + G+
Sbjct: 882 GHGNCDAVSGLCL-CEAGYEGPRCEQSCRQGYYGPSCEQKCRCEHGAACDHVSGACTCPA 940
Query: 70 NSEGR-CQ--CKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAG--SVKNTPNCDSVKG 123
G C+ C G G CD C+ + +A SC C PAG + +C +
Sbjct: 941 GWRGSFCEHACPAGFFGLDCDSACNCSAGAPCDAVTGSCIC-PAGRWGPRCAQSCPPLTF 999
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
+Q+ + + V + + P L+ C Y G + C + GR
Sbjct: 1000 GLNCSQICTCFNGASCDSVTGQCHCAPGWMGPTCLQACPPGLY--GKNCQHSCLCRNGGR 1057
Query: 184 CQ-------CKPGVTGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQC 234
C C G TG C+ C HY AGC+ +C C G CD + G C
Sbjct: 1058 CDPILGQCTCPEGWTGLACENECLPGHY---AAGCQLNCSCLHGGI------CDRLTGHC 1108
Query: 235 ECKDNVEGAQCRS 247
C G +C+S
Sbjct: 1109 LCPAGWTGDKCQS 1121
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 66/249 (26%), Positives = 94/249 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTAC----NCNPIGSLNL-QCNSEG-RCQ 76
G C C G +C++ C ++ + C NC+ + L L + EG RC+
Sbjct: 847 GRC-SCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLCLCEAGYEGPRCE 905
Query: 77 --CKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQ 129
C+ G G C+ +C H + +C C PAG + G C+SA
Sbjct: 906 QSCRQGYYGPSCEQKCRCEHGAACDHVSGACTC-PAGWRGSFCEHACPAGFFGLDCDSAC 964
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--------LQCNS- 180
S G + PAG W RC + PL G + + C+S
Sbjct: 965 NCSAG---APCDAVTGSCICPAGR--WG-PRCAQSCPPLTFGLNCSQICTCFNGASCDSV 1018
Query: 181 EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C C PG G C C Y G+ C+ SC C G CD + GQC C +
Sbjct: 1019 TGQCHCAPGWMGPTCLQACPPGLY--GK-NCQHSCLCRNGG------RCDPILGQCTCPE 1069
Query: 239 NVEGAQCRS 247
G C +
Sbjct: 1070 GWTGLACEN 1078
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 67/246 (27%), Positives = 90/246 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
G CL C G C+ C +Y G C C G C+ + GRC C PG
Sbjct: 804 GTCL-CLPGFVGSRCQDTCSAGWY---GTGCQIRCACANDG----HCDPTTGRCSCAPGW 855
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPAG-----SVKNTPNCDS-VKG-QCESAQLSSR 133
TG C R CD H+ G C C+ AG +V C++ +G +CE Q +
Sbjct: 856 TGLSCQRACDSGHW--GPDCIHPCNCS-AGHGNCDAVSGLCLCEAGYEGPRCE--QSCRQ 910
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHG---GSLNLQCNSEGRCQCK 187
G + R A + + C R ++ H G L C+S C C
Sbjct: 911 GYYGPSCEQKCRCEHGAACDHVSGACTCPAGWRGSF-CEHACPAGFFGLDCDSA--CNCS 967
Query: 188 PGVTGDKCD-RCDVNHYDFGEAGCKSC-------ECNPAGSVKNTPNCDSVKGQCECKDN 239
G D C +G +SC C+ + N +CDSV GQC C
Sbjct: 968 AGAPCDAVTGSCICPAGRWGPRCAQSCPPLTFGLNCSQICTCFNGASCDSVTGQCHCAPG 1027
Query: 240 VEGAQC 245
G C
Sbjct: 1028 WMGPTC 1033
Score = 127 (49.8 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 72/256 (28%), Positives = 92/256 (35%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACN---CNPIGSLNLQCNS-EG----R 74
G C C GP C + C Y K+ + C N C+PI L QC EG
Sbjct: 1020 GQC-HCAPGWMGPTCLQACPPGLYGKNCQHSCLCRNGGRCDPI--LG-QCTCPEGWTGLA 1075
Query: 75 CQ--CKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C+ C PG C C H + C C PAG + +C+S+ +S
Sbjct: 1076 CENECLPGHYAAGCQLNCSCLHGGICDRLTGHCLC-PAGWTGD---------KCQSSCVS 1125
Query: 132 SRGRVHTELRVQSRKN----------FDPAGNRIWDLRRCKRDTYPLGHGGSL------- 174
VH E RK F P G W C++ P G G
Sbjct: 1126 GTFGVHCEEHCACRKGASCHHVTGACFCPPG---WRGPHCEQ-ACPRGWFGEACAQRCLC 1181
Query: 175 --NLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDS 229
N C+ G C+C PG TG C++ C FG+ C+ C+C P T CD
Sbjct: 1182 PTNASCHHVTGECRCPPGFTGLSCEQACQPG--TFGK-DCEHLCQC-PG----ETWACDP 1233
Query: 230 VKGQCECKDNVEGAQC 245
G C C G C
Sbjct: 1234 ASGVCTCAAGYHGTGC 1249
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 67/247 (27%), Positives = 88/247 (35%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GHCL C G C+ C + + C AC G+ C+ G C C PG
Sbjct: 1106 GHCL-CPAGWTGDKCQSSCVSGTFGVHCEEHC-ACRK---GA---SCHHVTGACFCPPGW 1157
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN-TPNCDSVKG----QCESA-QLSSRGR 135
G C++ + FGEA + C C S + T C G CE A Q + G+
Sbjct: 1158 RGPHCEQACPRGW-FGEACAQRCLCPTNASCHHVTGECRCPPGFTGLSCEQACQPGTFGK 1216
Query: 136 VHTELRVQSRKNF--DPAG---------NRIWDLRRCKRDTYPLG--H-GGSLNL-QCN- 179
L + + DPA + L+RC Y G H LN C+
Sbjct: 1217 DCEHLCQCPGETWACDPASGVCTCAAGYHGTGCLQRCPSGRYGPGCEHICKCLNGGTCDP 1276
Query: 180 SEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C G G C C FG + C C + CD V G C C
Sbjct: 1277 ATGACYCPAGFLGADCSLACPQGR--FGPSCAHVCACRQGAA------CDPVSGACICSP 1328
Query: 239 NVEGAQC 245
G +C
Sbjct: 1329 GKTGVRC 1335
Score = 92 (37.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 34/108 (31%), Positives = 43/108 (39%)
Query: 21 GHGGHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCK 78
G G C DC G C E C + + G N + C C G+ C+ G C+C
Sbjct: 540 GQDG-C-DCPEGWTGIICNETCPPDTF---GKNCSSPCTCQNGGT----CDPVLGACRCP 590
Query: 79 PGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
PGV+G C D C Y G+ K C C N C + G C
Sbjct: 591 PGVSGAHCEDGCPKGFY--GKHCRKKCHC------ANRGRCHRLYGAC 630
Score = 92 (37.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 30/90 (33%), Positives = 36/90 (40%)
Query: 166 YPLGHGGSLNLQ-CNSEGRC-------QCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CEC 215
+ GH SL C + G C C G TG C+ C + FG+ C S C C
Sbjct: 518 HSFGHDCSLTCDDCRNGGTCFPGQDGCDCPEGWTGIICNETCPPD--TFGK-NCSSPCTC 574
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ CD V G C C V GA C
Sbjct: 575 QNGGT------CDPVLGACRCPPGVSGAHC 598
Score = 91 (37.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 182 GRCQCKPGVTGDKCD-RCDVNHYDFGEAGC-KSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C C PG+ G C C + FG GC + C C + +T +C+ G C CK
Sbjct: 628 GACLCDPGLYGRFCHLACPP--WAFGP-GCSEDCLCEQS----HTRSCNPKDGSCSCKAG 680
Query: 240 VEGAQCRS 247
+G +C++
Sbjct: 681 FQGERCQA 688
Score = 76 (31.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 31/112 (27%), Positives = 41/112 (36%)
Query: 9 RCF-FDKELYN--RTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN-CNPIGS 64
+C+ + E+ N G+GG C GP C C Y C + C
Sbjct: 326 QCYRIEMEIVNSCEAGNGGCSHGCSHTSTGPLCT-CPRGYELDEDQKTCIDIDDCANSPC 384
Query: 65 LNLQC-NSEG--RCQCKPG--VTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
C N+ G C C G + D C DV+ G GC+ N AGS
Sbjct: 385 CQQACANTPGGYECSCFAGYRLNTDGCGCEDVDECASGHGGCEHHCSNLAGS 436
>UNIPROTKB|O88281 [details] [associations]
symbol:Megf6 "Multiple epidermal growth factor-like domains
protein 6" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621188 GO:GO:0005576 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 CTD:1953 HOGENOM:HOG000097840
HOVERGEN:HBG079790 EMBL:AB011532 IPI:IPI00207575 PIR:T13954
RefSeq:NP_075244.1 UniGene:Rn.195598 ProteinModelPortal:O88281
PRIDE:O88281 GeneID:65049 KEGG:rno:65049 UCSC:RGD:621188
InParanoid:O88281 NextBio:613892 Genevestigator:O88281
Uniprot:O88281
Length = 1574
Score = 175 (66.7 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 75/266 (28%), Positives = 106/266 (39%)
Query: 5 GFSNRCFFDKELYNRTGH--GGHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNP 61
G S C ++ + R+ + G C C+ G C+ +C ++ G C C P
Sbjct: 653 GCSEDCLCEQS-HTRSCNPKDGSC-SCKAGFQGERCQAECESGFF---GPGCRHRCTCQP 707
Query: 62 IGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
G + E R QC PG G+ C + C V + +G SC P V C
Sbjct: 708 -GVACDPVSGECRTQCPPGYQGEDCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPP 766
Query: 121 VK-GQ-CESAQLSSR-GRVHTEL--RVQSRKNFDPAGNRIWDL-----RRCKRDTYPLG- 169
K G+ C + R G E+ + + +P L RC+ DT G
Sbjct: 767 GKTGEDCGADCPEGRWGLGCQEICPACEHGASCNPETGTCLCLPGFVGSRCQ-DTCSAGW 825
Query: 170 HGGSLNLQC---N------SEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAG 219
+G ++C N + GRC C PG TG C R CD H+ G C C+ AG
Sbjct: 826 YGTGCQIRCACANDGHCDPTTGRCSCAPGWTGLSCQRACDSGHW--GPDCIHPCNCS-AG 882
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQC 245
NCD+V G C C+ EG +C
Sbjct: 883 H----GNCDAVSGLCLCEAGYEGPRC 904
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 72/248 (29%), Positives = 91/248 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C+ C + G CE C + + K + C AC N G L C++ G C C G
Sbjct: 1322 GACI-CSPGKTGVRCEHGCPQDRFGKGCELKC-ACR-N--GGL---CHATNGSCSCPLGW 1373
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPN---CD-SVKGQ-CE-SAQLSSRG 134
G C+ C Y G A C C GS + T C GQ CE S G
Sbjct: 1374 MGPHCEHACPAGRY--GAACLLECFCQNNGSCEPTTGACLCGPGFYGQACEHSCPSGFHG 1431
Query: 135 R-VHTELRVQSRKNFDPAGNRI-----WDLRRCKRDTYPLGHGGSLNLQCNSE------- 181
Q DP + + + C++ G QCN
Sbjct: 1432 PGCQRVCECQQGAPCDPVSGQCLCPAGFHGQFCEKGCESGSFGDGCLQQCNCHTGVPCDP 1491
Query: 182 --GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCECKD 238
G C C PG TG CD D FG GC C+C G+ +CD + GQC C D
Sbjct: 1492 ISGLCLCPPGRTGAACD-LDCRRGRFGP-GCALRCDCG-GGA-----DCDPISGQCHCVD 1543
Query: 239 NVEGAQCR 246
+ G CR
Sbjct: 1544 SYMGPTCR 1551
Score = 155 (59.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 76/267 (28%), Positives = 95/267 (35%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNC-EKCR-DNYYQKSGDNFCTACNCN 60
C+ C D LY R H L C GP C E C + + +S + +C+C
Sbjct: 623 CHRLYGACLCDPGLYGRFCH----LACPPWAFGPGCSEDCLCEQSHTRSCNPKDGSCSCK 678
Query: 61 PIGSLNLQCNSE---G--------RCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSC--EC 106
G +C +E G RC C+PGV D C G G + C EC
Sbjct: 679 A-GFQGERCQAECESGFFGPGCRHRCTCQPGVACDPVSGECRTQCPP-GYQG-EDCGQEC 735
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI----WDLRRCK 162
P G+ NC G C RV E K + G W L C+
Sbjct: 736 -PVGTFG--VNCS---GSCSCVGAPCH-RVTGECLCPPGKTGEDCGADCPEGRWGLG-CQ 787
Query: 163 RDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCK-SCECNPAG 219
HG S CN E G C C PG G +C D C Y GC+ C C
Sbjct: 788 EICPACEHGAS----CNPETGTCLCLPGFVGSRCQDTCSAGWYG---TGCQIRCAC---- 836
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQCR 246
N +CD G+C C G C+
Sbjct: 837 --ANDGHCDPTTGRCSCAPGWTGLSCQ 861
Score = 146 (56.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 68/253 (26%), Positives = 97/253 (38%)
Query: 21 GHG------GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTA---CNCNPI-GSLNLQC 69
GHG G CL C+ +GP CE+ CR YY S + C C+ + G+
Sbjct: 882 GHGNCDAVSGLCL-CEAGYEGPRCEQSCRQGYYGPSCEQKCRCEHGAACDHVSGACTCPA 940
Query: 70 NSEGR-CQ--CKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAG--SVKNTPNCDSVKG 123
G C+ C G G CD C+ + +A SC C PAG + +C +
Sbjct: 941 GWRGSFCEHACPAGFFGLDCDSACNCSAGAPCDAVTGSCIC-PAGRWGPRCAQSCPPLTF 999
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
+Q+ + + V + + P L+ C Y G + C + GR
Sbjct: 1000 GLNCSQICTCFNGASCDSVTGQCHCAPGWMGPTCLQACPPGLY--GKNCQHSCLCRNGGR 1057
Query: 184 CQ-------CKPGVTGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQC 234
C C G TG C+ C HY AGC+ +C C G CD + G C
Sbjct: 1058 CDPILGQCTCPEGWTGLACENECLPGHY---AAGCQLNCSCLHGGI------CDRLTGHC 1108
Query: 235 ECKDNVEGAQCRS 247
C G +C+S
Sbjct: 1109 LCPAGWTGDKCQS 1121
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 66/249 (26%), Positives = 94/249 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTAC----NCNPIGSLNL-QCNSEG-RCQ 76
G C C G +C++ C ++ + C NC+ + L L + EG RC+
Sbjct: 847 GRC-SCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLCLCEAGYEGPRCE 905
Query: 77 --CKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQ 129
C+ G G C+ +C H + +C C PAG + G C+SA
Sbjct: 906 QSCRQGYYGPSCEQKCRCEHGAACDHVSGACTC-PAGWRGSFCEHACPAGFFGLDCDSAC 964
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN--------LQCNS- 180
S G + PAG W RC + PL G + + C+S
Sbjct: 965 NCSAG---APCDAVTGSCICPAGR--WG-PRCAQSCPPLTFGLNCSQICTCFNGASCDSV 1018
Query: 181 EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCECKD 238
G+C C PG G C C Y G+ C+ SC C G CD + GQC C +
Sbjct: 1019 TGQCHCAPGWMGPTCLQACPPGLY--GK-NCQHSCLCRNGG------RCDPILGQCTCPE 1069
Query: 239 NVEGAQCRS 247
G C +
Sbjct: 1070 GWTGLACEN 1078
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 67/246 (27%), Positives = 90/246 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
G CL C G C+ C +Y G C C G C+ + GRC C PG
Sbjct: 804 GTCL-CLPGFVGSRCQDTCSAGWY---GTGCQIRCACANDG----HCDPTTGRCSCAPGW 855
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPAG-----SVKNTPNCDS-VKG-QCESAQLSSR 133
TG C R CD H+ G C C+ AG +V C++ +G +CE Q +
Sbjct: 856 TGLSCQRACDSGHW--GPDCIHPCNCS-AGHGNCDAVSGLCLCEAGYEGPRCE--QSCRQ 910
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCK---RDTYPLGHG---GSLNLQCNSEGRCQCK 187
G + R A + + C R ++ H G L C+S C C
Sbjct: 911 GYYGPSCEQKCRCEHGAACDHVSGACTCPAGWRGSF-CEHACPAGFFGLDCDSA--CNCS 967
Query: 188 PGVTGDKCD-RCDVNHYDFGEAGCKSC-------ECNPAGSVKNTPNCDSVKGQCECKDN 239
G D C +G +SC C+ + N +CDSV GQC C
Sbjct: 968 AGAPCDAVTGSCICPAGRWGPRCAQSCPPLTFGLNCSQICTCFNGASCDSVTGQCHCAPG 1027
Query: 240 VEGAQC 245
G C
Sbjct: 1028 WMGPTC 1033
Score = 127 (49.8 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 72/256 (28%), Positives = 92/256 (35%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACN---CNPIGSLNLQCNS-EG----R 74
G C C GP C + C Y K+ + C N C+PI L QC EG
Sbjct: 1020 GQC-HCAPGWMGPTCLQACPPGLYGKNCQHSCLCRNGGRCDPI--LG-QCTCPEGWTGLA 1075
Query: 75 CQ--CKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C+ C PG C C H + C C PAG + +C+S+ +S
Sbjct: 1076 CENECLPGHYAAGCQLNCSCLHGGICDRLTGHCLC-PAGWTGD---------KCQSSCVS 1125
Query: 132 SRGRVHTELRVQSRKN----------FDPAGNRIWDLRRCKRDTYPLGHGGSL------- 174
VH E RK F P G W C++ P G G
Sbjct: 1126 GTFGVHCEEHCACRKGASCHHVTGACFCPPG---WRGPHCEQ-ACPRGWFGEACAQRCLC 1181
Query: 175 --NLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDS 229
N C+ G C+C PG TG C++ C FG+ C+ C+C P T CD
Sbjct: 1182 PTNASCHHVTGECRCPPGFTGLSCEQACQPG--TFGK-DCEHLCQC-PG----ETWACDP 1233
Query: 230 VKGQCECKDNVEGAQC 245
G C C G C
Sbjct: 1234 ASGVCTCAAGYHGTGC 1249
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 67/247 (27%), Positives = 88/247 (35%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
GHCL C G C+ C + + C AC G+ C+ G C C PG
Sbjct: 1106 GHCL-CPAGWTGDKCQSSCVSGTFGVHCEEHC-ACRK---GA---SCHHVTGACFCPPGW 1157
Query: 82 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN-TPNCDSVKG----QCESA-QLSSRGR 135
G C++ + FGEA + C C S + T C G CE A Q + G+
Sbjct: 1158 RGPHCEQACPRGW-FGEACAQRCLCPTNASCHHVTGECRCPPGFTGLSCEQACQPGTFGK 1216
Query: 136 VHTELRVQSRKNF--DPAG---------NRIWDLRRCKRDTYPLG--H-GGSLNL-QCN- 179
L + + DPA + L+RC Y G H LN C+
Sbjct: 1217 DCEHLCQCPGETWACDPASGVCTCAAGYHGTGCLQRCPSGRYGPGCEHICKCLNGGTCDP 1276
Query: 180 SEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKD 238
+ G C C G G C C FG + C C + CD V G C C
Sbjct: 1277 ATGACYCPAGFLGADCSLACPQGR--FGPSCAHVCACRQGAA------CDPVSGACICSP 1328
Query: 239 NVEGAQC 245
G +C
Sbjct: 1329 GKTGVRC 1335
Score = 92 (37.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 34/108 (31%), Positives = 43/108 (39%)
Query: 21 GHGGHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCK 78
G G C DC G C E C + + G N + C C G+ C+ G C+C
Sbjct: 540 GQDG-C-DCPEGWTGIICNETCPPDTF---GKNCSSPCTCQNGGT----CDPVLGACRCP 590
Query: 79 PGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
PGV+G C D C Y G+ K C C N C + G C
Sbjct: 591 PGVSGAHCEDGCPKGFY--GKHCRKKCHC------ANRGRCHRLYGAC 630
Score = 92 (37.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 30/90 (33%), Positives = 36/90 (40%)
Query: 166 YPLGHGGSLNLQ-CNSEGRC-------QCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CEC 215
+ GH SL C + G C C G TG C+ C + FG+ C S C C
Sbjct: 518 HSFGHDCSLTCDDCRNGGTCFPGQDGCDCPEGWTGIICNETCPPD--TFGK-NCSSPCTC 574
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+ CD V G C C V GA C
Sbjct: 575 QNGGT------CDPVLGACRCPPGVSGAHC 598
Score = 91 (37.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 182 GRCQCKPGVTGDKCD-RCDVNHYDFGEAGC-KSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C C PG+ G C C + FG GC + C C + +T +C+ G C CK
Sbjct: 628 GACLCDPGLYGRFCHLACPP--WAFGP-GCSEDCLCEQS----HTRSCNPKDGSCSCKAG 680
Query: 240 VEGAQCRS 247
+G +C++
Sbjct: 681 FQGERCQA 688
Score = 76 (31.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 31/112 (27%), Positives = 41/112 (36%)
Query: 9 RCF-FDKELYN--RTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN-CNPIGS 64
+C+ + E+ N G+GG C GP C C Y C + C
Sbjct: 326 QCYRIEMEIVNSCEAGNGGCSHGCSHTSTGPLCT-CPRGYELDEDQKTCIDIDDCANSPC 384
Query: 65 LNLQC-NSEG--RCQCKPG--VTGDKCDRCDVNHYDFGEAGCKSCECNPAGS 111
C N+ G C C G + D C DV+ G GC+ N AGS
Sbjct: 385 CQQACANTPGGYECSCFAGYRLNTDGCGCEDVDECASGHGGCEHHCSNLAGS 436
>UNIPROTKB|A8XMW6 [details] [associations]
symbol:ced-1 "Cell death abnormality protein 1"
species:6238 "Caenorhabditis briggsae" [GO:0001845 "phagolysosome
assembly" evidence=ISS] [GO:0009986 "cell surface" evidence=ISS]
[GO:0012501 "programmed cell death" evidence=ISS] [GO:0031532
"actin cytoskeleton reorganization" evidence=ISS] [GO:0034620
"cellular response to unfolded protein" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=ISS] [GO:0043652
"engulfment of apoptotic cell" evidence=ISS] [GO:0045184
"establishment of protein localization" evidence=ISS]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 GO:GO:0005886
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 GO:GO:0043652 GO:GO:0012501 GO:GO:0034620
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
EMBL:HE600911 ProteinModelPortal:A8XMW6 STRING:A8XMW6
EnsemblMetazoa:CBG15845 WormBase:CBG15845 HOGENOM:HOG000294130
GO:GO:0001845 Pfam:PF12661 Uniprot:A8XMW6
Length = 1134
Score = 174 (66.3 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 77/261 (29%), Positives = 100/261 (38%)
Query: 1 CNCNGFSNRCF-FDKELYNRTGHGGHCLD--CQGDRDGPNCEKCRDNYYQKSGDNFCTA- 56
C CNG C FD + G+ GH + C G NCEK R G N T
Sbjct: 474 CECNGRGIGCHGFDGKCNCAPGYTGHRCEHHCPALTFGANCEK-RCQCPAGVGCNPITGE 532
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCD-VNHYDFGEAGCKSCECNPA-GSVK 113
C C P G L+C+ C G G +C C VN E G C C P G
Sbjct: 533 CEC-PAGRQGLKCD----ISCPEGSYGPECKLHCKCVNGKCDPETG--ECSCEPGFGGAD 585
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR--IWDLRRCKRDTY-PLGH 170
+ +C KG+ A S + Q+ K P G + + D + C+ +TY P
Sbjct: 586 CSTSCP--KGKYGDACELSCDCSDSYCSRQTGKCICPLGKKGTLCD-QPCEANTYGPQCQ 642
Query: 171 GGSLNLQCNS----EGRC-QCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNT 224
+ QC S G C C PG +G +C++ C Y G C C G
Sbjct: 643 LTTTPSQCASTDPRNGVCLTCPPGSSGHQCEQNCPQGTY--GTDCASKCACADGGH---- 696
Query: 225 PNCDSVKGQCECKDNVEGAQC 245
CD G+C C+ GA C
Sbjct: 697 -GCDPTTGECICEPGYHGATC 716
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 67/248 (27%), Positives = 97/248 (39%)
Query: 24 GHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G C +C R G C+ C + Y G C C +N +C+ E G C C+PG
Sbjct: 531 GEC-ECPAGRQGLKCDISCPEGSY---GPECKLHCKC-----VNGKCDPETGECSCEPGF 581
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ--------CES----- 127
G C C Y G+A SC+C+ + + T C G+ CE+
Sbjct: 582 GGADCSTSCPKGKY--GDACELSCDCSDSYCSRQTGKCICPLGKKGTLCDQPCEANTYGP 639
Query: 128 -AQLSSRGR--VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ-----CN 179
QL++ T+ R P + + C + TY C+
Sbjct: 640 QCQLTTTPSQCASTDPRNGVCLTCPPGSSGHQCEQNCPQGTYGTDCASKCACADGGHGCD 699
Query: 180 -SEGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+ G C C+PG G C ++C FG A ++C AGS +CD + GQC C
Sbjct: 700 PTTGECICEPGYHGATCSEKCPDGK--FGYACAQNCPKCAAGS-----SCDHISGQCVCP 752
Query: 238 DNVEGAQC 245
+EGA C
Sbjct: 753 AGLEGATC 760
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 77/277 (27%), Positives = 109/277 (39%)
Query: 1 CNCNGFSNRCFFDKELYN---RTG-HGGHCLD-CQGDRDGPNCEK---CRD----NYYQK 48
C+C +N C D EL + +G G C + C D+ GPNC K C++ N+ K
Sbjct: 164 CDCENGAN-C--DPELGDCICPSGFQGKRCEEECPIDKWGPNCVKSCPCQNGGKCNHEGK 220
Query: 49 S------GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGC 101
G +C C G C E C C+ G T D + +C + F A C
Sbjct: 221 CVCTDGWGGEYCLN-KCEE-GKFGADCKFE--CTCQNGATCDNTNGKC-LCKSGFHGALC 275
Query: 102 -KSCE-------CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGN 153
K C C N +CDS G+C+ + G+ ++ +R F
Sbjct: 276 EKPCSEGFFGAGCTQKCQCLNNQDCDSETGECKC--IGWTGK-QCDIGC-ARGRFG---- 327
Query: 154 RIWDLRRCKRD-TYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCD--RCDVNHYDFGEAG 209
+CK+ T P N C+++ G CQC+ G G CD +C + Y A
Sbjct: 328 -----LQCKQKCTCPGLEFQDSNASCDAKTGECQCESGYKGANCDERKCSADTYG---AD 379
Query: 210 C-KSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C K C C + +V PN G C CK G C
Sbjct: 380 CSKQCSCVMSNTVMCAPNT----GFCRCKPGFYGDNC 412
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 64/248 (25%), Positives = 93/248 (37%)
Query: 23 GGHC-LDCQGDRDGPNCEK---CRDNYYQKSGDNFCTA----CNCNPIGSLNLQCNSEGR 74
G C + C R G C++ C +Q S + C A C C G C+
Sbjct: 314 GKQCDIGCARGRFGLQCKQKCTCPGLEFQDSNAS-CDAKTGECQCES-GYKGANCDER-- 369
Query: 75 CQCKPGVTGDKCDR---CDVNHYDFGEAGCKSCECNPAGSVKNTP-NC--DSVKGQCESA 128
+C G C + C +++ C C P N C DS CE
Sbjct: 370 -KCSADTYGADCSKQCSCVMSNTVMCAPNTGFCRCKPGFYGDNCELACSKDSYGPNCEKQ 428
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRR-CKRDTYPLGHGGSLNLQCNS------- 180
+ +E + K +G + + C D Y G +L +CN
Sbjct: 429 AMCDWTHA-SEADPANGKCVCKSGRSGANCSQPCPIDFY--GPNCALQCECNGRGIGCHG 485
Query: 181 -EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGC-KSCECNPAGSVKNTPNCDSVKGQCECK 237
+G+C C PG TG +C+ C FG A C K C+C PAG C+ + G+CEC
Sbjct: 486 FDGKCNCAPGYTGHRCEHHCPA--LTFG-ANCEKRCQC-PAGV-----GCNPITGECECP 536
Query: 238 DNVEGAQC 245
+G +C
Sbjct: 537 AGRQGLKC 544
Score = 136 (52.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 53/200 (26%), Positives = 80/200 (40%)
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR------CDVNHYDFGEAGCKSCECNPAG- 110
NC P G+ C S +C C G G CD C+ ++ G + C G
Sbjct: 675 NC-PQGTYGTDCAS--KCACADG--GHGCDPTTGECICEPGYH--GATCSEKCPDGKFGY 727
Query: 111 -SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
+N P C + C+ +S G+ ++ P G W C++ +
Sbjct: 728 ACAQNCPKC-AAGSSCD--HIS--GQCVCPAGLEGATCTRPCGVGFWG-NGCRQ----VC 777
Query: 170 HGGSLNLQCNSE-GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
S QCN++ G C C G GD+CD+ C+ +Y G K C+C G+ T +C
Sbjct: 778 RCTSEFKQCNAQTGECSCPAGFQGDRCDKPCEDGYY--GPDCIKKCKCQ--GTA--TASC 831
Query: 228 DSVKGQCECKDNVEGAQCRS 247
+ V G C C G C +
Sbjct: 832 NRVTGVCICHPGFTGEFCHA 851
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 44/139 (31%), Positives = 53/139 (38%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPI 62
NG C E G C C G C+K C D YY G + C C
Sbjct: 771 NGCRQVCRCTSEFKQCNAQTGEC-SCPAGFQGDRCDKPCEDGYY---GPDCIKKCKCQ-- 824
Query: 63 GSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDS 120
G+ CN G C C PG TG+ C C + FG C S EC P + CD+
Sbjct: 825 GTATASCNRVTGVCICHPGFTGEFCHALCPES--TFG-LRC-SKEC-PKDGCGDGYECDA 879
Query: 121 VKGQCESAQLSSRGRVHTE 139
G C Q+S G+ E
Sbjct: 880 AIGCCHVDQMSC-GKAKQE 897
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 30/89 (33%), Positives = 41/89 (46%)
Query: 39 EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFG 97
++C + YYQ DN C +CNP +C G+C+C PG G C C + + G
Sbjct: 103 KQCCEGYYQTK-DNQCQP-DCNPPCKKG-KCVEPGKCECDPGFGGKICSSSCSIGTWGLG 159
Query: 98 EAGC-KSCECNPAGSVKNTPNCDSVKGQC 125
C K C+C +N NCD G C
Sbjct: 160 ---CSKKCDC------ENGANCDPELGDC 179
>ZFIN|ZDB-GENE-080807-4 [details] [associations]
symbol:hspg2 "heparan sulfate proteoglycan 2"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 ZFIN:ZDB-GENE-080807-4
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 GeneTree:ENSGT00530000063501
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0007519 Pfam:PF12661 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
EMBL:CR936463 EMBL:CR855310 IPI:IPI00889358
Ensembl:ENSDART00000111029 Bgee:F1RCP6 Uniprot:F1RCP6
Length = 3422
Score = 160 (61.4 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 56/187 (29%), Positives = 77/187 (41%)
Query: 75 CQCKPGVTGDKCDRCDVNHYDF-G-EAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C C G +G C CDV + G G C+ CEC+ S +CDS G C + +
Sbjct: 1049 CACPQGYSGPSCQDCDVGYTRTPGLYLGTCEKCECHGHAS-----SCDSETGDCLNCLHN 1103
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC--NSEGR--CQCK 187
+ GR E + G D + C R LG + C S+G+ C+C
Sbjct: 1104 TIGR-RCENCISGYYGNPKTG----DPQAC-RPCPCLGQTSNQPSSCYLGSDGQPVCECP 1157
Query: 188 PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD-------SVKGQCECKDNV 240
G TG +C+RC + + G + C P + + CD S G C CK NV
Sbjct: 1158 AGYTGRRCERCAPGYIGNPQLGQR---CTPGSNNGDCYRCDQSGSEGCSGTGVCRCKMNV 1214
Query: 241 EGAQCRS 247
EG C S
Sbjct: 1215 EGPTCSS 1221
Score = 150 (57.9 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 57/202 (28%), Positives = 71/202 (35%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNPIGSLNLQCNSE-GRC-QCKPGVTGD 84
C GP+C+ C Y + G C C C+ S C+SE G C C G
Sbjct: 1051 CPQGYSGPSCQDCDVGYTRTPGLYLGTCEKCECHGHAS---SCDSETGDCLNCLHNTIGR 1107
Query: 85 KCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPN-CD-SVKGQ--CESAQLSSRGRV 136
+C+ C +Y + G C+ C C G N P+ C GQ CE GR
Sbjct: 1108 RCENCISGYYGNPKTGDPQACRPCPC--LGQTSNQPSSCYLGSDGQPVCE-CPAGYTGR- 1163
Query: 137 HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD 196
E G R D Y GS C+ G C+CK V G C
Sbjct: 1164 RCERCAPGYIGNPQLGQRCTPGSN-NGDCYRCDQSGSEG--CSGTGVCRCKMNVEGPTCS 1220
Query: 197 RCDVNHYDFGEA---GCKSCEC 215
C + A GC SC C
Sbjct: 1221 SCKQGTFHLSPANKDGCLSCFC 1242
Score = 142 (55.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 40/129 (31%), Positives = 58/129 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGD-NFCTAC 57
C C+G ++ C D E G CL+C + G CE C YY K+GD C C
Sbjct: 1081 CECHGHASSC--DSET-------GDCLNCLHNTIGRRCENCISGYYGNPKTGDPQACRPC 1131
Query: 58 NCNPIGSLNLQ---C--NSEGR--CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG 110
C +G + Q C S+G+ C+C G TG +C+RC + + G + C P
Sbjct: 1132 PC--LGQTSNQPSSCYLGSDGQPVCECPAGYTGRRCERCAPGYIGNPQLGQR---CTPGS 1186
Query: 111 SVKNTPNCD 119
+ + CD
Sbjct: 1187 NNGDCYRCD 1195
Score = 138 (53.6 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 49/183 (26%), Positives = 71/183 (38%)
Query: 75 CQCKPGVTGDKCDRCDVNHYDF-GE-AG-CKSCECNPAGSVKNTPNCDSVKGQCESAQLS 131
C+C G +G C+ C G G C C CN S CD V G C S Q
Sbjct: 656 CRCPAGYSGLSCESCSPGFERVPGPYLGICAGCNCNGHASA-----CDPVSGHCLSCQHK 710
Query: 132 SRGRVHTELRVQSRKNF--DPAGNRIWDLRRCKRDTYPLGH--GGSLNLQCNSEGRCQ-C 186
+ G E + + F DP+ + D + C + L +++ C C
Sbjct: 711 TEG-AQCE---KCKPGFFGDPSRGQYDDCKPCPCPYTETSRRFSDTCFLDHDNQATCDAC 766
Query: 187 KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS----VKNTPNCDSVKGQCECKDNVEG 242
+ G TG +C++C + G + +C PA S N + + C CK NV G
Sbjct: 767 REGYTGRRCEKCAPGYV--GNPLQPNGKCIPAASPISKCDNRGTINPISKPCYCKSNVAG 824
Query: 243 AQC 245
A C
Sbjct: 825 ALC 827
Score = 129 (50.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 38/132 (28%), Positives = 59/132 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNF--CTAC 57
CNCNG ++ C D GHCL CQ +G CEKC+ ++ S + C C
Sbjct: 688 CNCNGHASAC--DPV-------SGHCLSCQHKTEGAQCEKCKPGFFGDPSRGQYDDCKPC 738
Query: 58 NCNPIGSLNLQ----C----NSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNP 108
C P + + C +++ C C+ G TG +C++C + G + +C P
Sbjct: 739 PC-PYTETSRRFSDTCFLDHDNQATCDACREGYTGRRCEKCAPGYV--GNPLQPNGKCIP 795
Query: 109 AGSVKNTPNCDS 120
A S + CD+
Sbjct: 796 AASPIS--KCDN 805
Score = 118 (46.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY--QKSGD-NFCTAC 57
C CNG S+ C + TG C +CQ + G CE+C D ++ +G C C
Sbjct: 1481 CECNGHSDTC------HPETGI---CTNCQHNTKGELCEQCVDGFFGDPTAGTPEDCQPC 1531
Query: 58 NC---NPIGSLNLQCNSEG----RCQ-CKPGVTGDKCDRC 89
C +P + C S G +C C+PG G C+RC
Sbjct: 1532 ACPGTDPENQFSRTCESLGNGGYQCTACQPGYLGQYCERC 1571
Score = 116 (45.9 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 42/137 (30%), Positives = 57/137 (41%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA---G-CKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+CQC PG +G C C + G G C+ CECN G ++ C G C + Q
Sbjct: 1447 QCQCPPGYSGLSCQDCASGYTRTGGGLYLGHCEPCECN--G---HSDTCHPETGICTNCQ 1501
Query: 130 LSSRGRVHTELRVQSRKNF--DPAGNRIWDLRRCK-RDTYPLGHGGSLNLQCNSEG---- 182
+++G EL Q F DP D + C T P + C S G
Sbjct: 1502 HNTKG----ELCEQCVDGFFGDPTAGTPEDCQPCACPGTDP---ENQFSRTCESLGNGGY 1554
Query: 183 RCQ-CKPGVTGDKCDRC 198
+C C+PG G C+RC
Sbjct: 1555 QCTACQPGYLGQYCERC 1571
Score = 100 (40.3 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 35/117 (29%), Positives = 54/117 (46%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRC-QCKPGVTG 83
C G +C+ C Y + G + C C CN G + C+ E G C C+ G
Sbjct: 1450 CPPGYSGLSCQDCASGYTRTGGGLYLGHCEPCECN--GHSDT-CHPETGICTNCQHNTKG 1506
Query: 84 DKCDRCDVNHYDFGE--AG----CKSCECNPAGSVKN--TPNCDSV-KG--QCESAQ 129
+ C++C V+ + FG+ AG C+ C C P +N + C+S+ G QC + Q
Sbjct: 1507 ELCEQC-VDGF-FGDPTAGTPEDCQPCAC-PGTDPENQFSRTCESLGNGGYQCTACQ 1560
Score = 90 (36.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 23/68 (33%), Positives = 31/68 (45%)
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEA---G-CKSCECNPAGSVKNTPNCDSVKGQC-ECK 237
+CQC PG +G C C + G G C+ CECN G ++ C G C C+
Sbjct: 1447 QCQCPPGYSGLSCQDCASGYTRTGGGLYLGHCEPCECN--G---HSDTCHPETGICTNCQ 1501
Query: 238 DNVEGAQC 245
N +G C
Sbjct: 1502 HNTKGELC 1509
Score = 73 (30.8 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 25/100 (25%), Positives = 37/100 (37%)
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF 205
K+ D + + + CK D P + G+ S +C CK G TG C H
Sbjct: 2864 KDLDKSSTGVSNCPTCK-DR-PCQNDGTCEDSVASLYKCTCKRGFTGSNCQHHSSLH--- 2918
Query: 206 GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C + C P + N P+ + C C G +C
Sbjct: 2919 ----CHTEACGPDATCINRPS--GLGYDCRCHLGKSGNKC 2952
Score = 65 (27.9 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 22/83 (26%), Positives = 29/83 (34%)
Query: 164 DTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK-SCECNPAGSVK 222
D P H G+ E +C C G GD+C+ + C+ S +C GS
Sbjct: 3140 DRRPCLHAGTCMATAEYEYQCFCAEGYEGDRCE--------IVKESCRHSSQCQNGGS-- 3189
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
C V C C G C
Sbjct: 3190 ----C--VNNHCVCPAGYSGRHC 3206
Score = 65 (27.9 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC-DSVKG--QCECKDNVEGAQCR 246
+ GD+ D++ G + C +C+ P +N C DSV +C CK G+ C+
Sbjct: 2856 IQGDEVIFKDLDKSSTGVSNCPTCKDRPC---QNDGTCEDSVASLYKCTCKRGFTGSNCQ 2912
Score = 63 (27.2 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 21/70 (30%), Positives = 30/70 (42%)
Query: 4 NGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNF--CTACNCNP 61
NG RC D+ G C C+ + +GP C C+ + S N C +C C
Sbjct: 1188 NGDCYRC--DQSGSEGCSGTGVCR-CKMNVEGPTCSSCKQGTFHLSPANKDGCLSCFC-- 1242
Query: 62 IGSLNLQCNS 71
+G + QC S
Sbjct: 1243 MG-VTQQCTS 1251
Score = 44 (20.5 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 19 RTGH---GGHCLDC 29
R GH GGHC+ C
Sbjct: 432 RDGHFSVGGHCMPC 445
Score = 41 (19.5 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 14/49 (28%), Positives = 18/49 (36%)
Query: 28 DCQGDRDGPNCEKCRDNYYQKSGDNFCTACN-CNPIGSLNLQCNSEGRC 75
DCQ + D NC R C + C P + QC+ E C
Sbjct: 263 DCQDNSDEMNCPTKRPGAACAPEQFVCLSDRKCIPA---SYQCDEEPDC 308
Score = 39 (18.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 152 GNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR 197
G+R ++ R + +GGS C + C C G +G C++
Sbjct: 3168 GDRCEIVKESCRHSSQCQNGGS----CVNN-HCVCPAGYSGRHCEK 3208
Score = 37 (18.1 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 233 QCECKDNVEGAQCR 246
QC+C G C+
Sbjct: 1447 QCQCPPGYSGLSCQ 1460
Score = 37 (18.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 171 GGSLNLQCNSEGRCQCKPGVTGDKCD 196
G +NL+C + G + +P V + D
Sbjct: 2166 GDPINLECQAAG--EPRPSVRWHRLD 2189
>UNIPROTKB|D4ABC1 [details] [associations]
symbol:Celsr2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001368
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR017981
Pfam:PF00002 Pfam:PF00008 Pfam:PF01825 PRINTS:PR00249
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
SMART:SM00008 SMART:SM00179 SMART:SM00181 SMART:SM00208
SMART:SM00303 InterPro:IPR000152 RGD:69237 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR022624 Pfam:PF12003
Pfam:PF02210 OrthoDB:EOG4KKZ23 IPI:IPI00779219
ProteinModelPortal:D4ABC1 Ensembl:ENSRNOT00000055873
ArrayExpress:D4ABC1 Uniprot:D4ABC1
Length = 1553
Score = 174 (66.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 41/99 (41%), Positives = 51/99 (51%)
Query: 21 GHGGH--CLDCQGD-RDG--PNCEK------CRDNYYQKSGDNFCTACNCNPIGSLNLQC 69
G GH C C D G P+C K C++N+Y+ C C+C P GSL+ C
Sbjct: 742 GWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKENHYRPPSSPTCLLCDCYPTGSLSRVC 801
Query: 70 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 107
+ E G+C CKPGV G +CDRCD N F E CE N
Sbjct: 802 DPEDGQCPCKPGVIGRQCDRCD-N--PFAEVTTNGCEVN 837
Score = 140 (54.3 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 59/196 (30%), Positives = 77/196 (39%)
Query: 61 PIGSLNLQCNSEGRCQCKPGVTG-DKCDR--CDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
P G +L + +PG + D CD C N Y + SC C+P N N
Sbjct: 636 PEGVSSLDPSRGESINVEPGCSWPDPCDSNPCPTNSYCSNDWDSYSCSCDPGYYGDNCTN 695
Query: 118 -CDSVKGQCESAQLSSR--GRVHTELRVQSRKNF-DP-AGNRIWDLRRCKRDTYPLGHGG 172
CD CE + +R H + + N+ P RI D + C R + GH
Sbjct: 696 VCDL--NPCEHQSVCTRKPSAPHGYI-CECLPNYLGPYCETRI-D-QPCPRGWW--GHPT 748
Query: 173 SLNLQCN-SEG-RCQCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDS 229
C+ S+G C T +C C NHY C C+C P GS+ CD
Sbjct: 749 CGPCNCDVSKGFDPDCNK--TSGEC-HCKENHYRPPSSPTCLLCDCYPTGSLSRV--CDP 803
Query: 230 VKGQCECKDNVEGAQC 245
GQC CK V G QC
Sbjct: 804 EDGQCPCKPGVIGRQC 819
Score = 138 (53.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 56/172 (32%), Positives = 71/172 (41%)
Query: 50 GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT-GDKCDRCDVNHYD-FGEAGC-KSCEC 106
GDN C+ NP C + C KP G C+ C N+ + E + C
Sbjct: 690 GDNCTNVCDLNP-------CEHQSVCTRKPSAPHGYICE-CLPNYLGPYCETRIDQPCPR 741
Query: 107 NPAGSVKNTP-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
G P NCD KG +S G H + ++ P + L C D
Sbjct: 742 GWWGHPTCGPCNCDVSKGFDPDCNKTS-GECHCK-----ENHYRPPSSPTCLL--C--DC 791
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
YP G SL+ C+ E G+C CKPGV G +CDRCD N F E CE N
Sbjct: 792 YPTG---SLSRVCDPEDGQCPCKPGVIGRQCDRCD-N--PFAEVTTNGCEVN 837
Score = 61 (26.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 29/90 (32%), Positives = 40/90 (44%)
Query: 1 CNCN-GFS-NRCFFDKEL-YNRT-GHGGHCLDCQGD-----RDGPNCEKCRDNYYQKSGD 51
C C GF+ + C + +L Y+R G GHC +G RDG E C + +SG
Sbjct: 139 CRCPPGFTGDYCETEVDLCYSRPCGPHGHCRSREGGYTCLCRDGYTGEHCEVS--ARSGR 196
Query: 52 NFCTACNCNPIGS-LNLQCNSEGRCQCKPG 80
CT C G+ +NL +C C G
Sbjct: 197 --CTPGVCKNGGTCVNLLVGGF-KCDCPSG 223
>RGD|69237 [details] [associations]
symbol:Celsr2 "cadherin, EGF LAG seven-pass G-type receptor 2"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=ISO] [GO:0003341 "cilium movement" evidence=ISO]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007156 "homophilic cell adhesion"
evidence=IEA;ISO] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=ISO] [GO:0021591 "ventricular
system development" evidence=ISO] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=ISO] [GO:0022407
"regulation of cell-cell adhesion" evidence=IMP] [GO:0032880
"regulation of protein localization" evidence=ISO] [GO:0033326
"cerebrospinal fluid secretion" evidence=ISO] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00208 SMART:SM00303 InterPro:IPR000152 RGD:69237
GO:GO:0016021 GO:GO:0005886 GO:GO:0001764 GO:GO:0004930
GO:GO:0007218 GO:GO:0005509 GO:GO:0007283 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0048813 PROSITE:PS01186
GO:GO:0022407 eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
Pfam:PF02210 HOGENOM:HOG000231346 HOVERGEN:HBG050887 EMBL:AB011529
IPI:IPI00373409 UniGene:Rn.222746 ProteinModelPortal:Q9QYP2
STRING:Q9QYP2 PhosphoSite:Q9QYP2 PRIDE:Q9QYP2 UCSC:RGD:69237
InParanoid:Q9QYP2 ArrayExpress:Q9QYP2 Genevestigator:Q9QYP2
GermOnline:ENSRNOG00000020058 Uniprot:Q9QYP2
Length = 2144
Score = 174 (66.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 41/99 (41%), Positives = 51/99 (51%)
Query: 21 GHGGH--CLDCQGD-RDG--PNCEK------CRDNYYQKSGDNFCTACNCNPIGSLNLQC 69
G GH C C D G P+C K C++N+Y+ C C+C P GSL+ C
Sbjct: 1102 GWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKENHYRPPSSPTCLLCDCYPTGSLSRVC 1161
Query: 70 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 107
+ E G+C CKPGV G +CDRCD N F E CE N
Sbjct: 1162 DPEDGQCPCKPGVIGRQCDRCD-N--PFAEVTTNGCEVN 1197
Score = 140 (54.3 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 58/194 (29%), Positives = 76/194 (39%)
Query: 61 PIGSLNLQCNSEGRCQCKPGVTG-DKCDR--CDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
P G +L + +PG + D CD C N Y + SC C+P N N
Sbjct: 996 PEGVSSLDPSRGESINVEPGCSWPDPCDSNPCPTNSYCSNDWDSYSCSCDPGYYGDNCTN 1055
Query: 118 -CDSVKGQCESAQLSSRGRVHTELRVQSRKNF-DP-AGNRIWDLRRCKRDTYPLGHGGSL 174
CD + +SA H + + N+ P RI D + C R + GH
Sbjct: 1056 VCDLNPCEHQSACTRKPSAPHGYI-CECLPNYLGPYCETRI-D-QPCPRGWW--GHPTCG 1110
Query: 175 NLQCN-SEG-RCQCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVK 231
C+ S+G C T +C C NHY C C+C P GS+ CD
Sbjct: 1111 PCNCDVSKGFDPDCNK--TSGEC-HCKENHYRPPSSPTCLLCDCYPTGSLSRV--CDPED 1165
Query: 232 GQCECKDNVEGAQC 245
GQC CK V G QC
Sbjct: 1166 GQCPCKPGVIGRQC 1179
Score = 140 (54.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 56/172 (32%), Positives = 71/172 (41%)
Query: 50 GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT-GDKCDRCDVNHYD-FGEAGC-KSCEC 106
GDN C+ NP C + C KP G C+ C N+ + E + C
Sbjct: 1050 GDNCTNVCDLNP-------CEHQSACTRKPSAPHGYICE-CLPNYLGPYCETRIDQPCPR 1101
Query: 107 NPAGSVKNTP-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
G P NCD KG +S G H + ++ P + L C D
Sbjct: 1102 GWWGHPTCGPCNCDVSKGFDPDCNKTS-GECHCK-----ENHYRPPSSPTCLL--C--DC 1151
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
YP G SL+ C+ E G+C CKPGV G +CDRCD N F E CE N
Sbjct: 1152 YPTG---SLSRVCDPEDGQCPCKPGVIGRQCDRCD-N--PFAEVTTNGCEVN 1197
Score = 61 (26.5 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 29/90 (32%), Positives = 40/90 (44%)
Query: 1 CNCN-GFS-NRCFFDKEL-YNRT-GHGGHCLDCQGD-----RDGPNCEKCRDNYYQKSGD 51
C C GF+ + C + +L Y+R G GHC +G RDG E C + +SG
Sbjct: 499 CRCPPGFTGDYCETEVDLCYSRPCGPHGHCRSREGGYTCLCRDGYTGEHCEVS--ARSGR 556
Query: 52 NFCTACNCNPIGS-LNLQCNSEGRCQCKPG 80
CT C G+ +NL +C C G
Sbjct: 557 --CTPGVCKNGGTCVNLLVGGF-KCDCPSG 583
>UNIPROTKB|F1NSZ5 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0050873 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 OMA:QLDDYNA
EMBL:AADN02002050 EMBL:AADN02002048 EMBL:AADN02002049
IPI:IPI00578400 Ensembl:ENSGALT00000024193 Uniprot:F1NSZ5
Length = 1766
Score = 173 (66.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 47/144 (32%), Positives = 63/144 (43%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQK---SGDNFCTAC 57
CNCNG +NRC G G C+DCQ + G +CE+C D + FC C
Sbjct: 16 CNCNGNANRCL--------DG-SGICVDCQRNTTGEHCEQCPDGFVGDVVGGAPTFCQPC 66
Query: 58 NCNPI---GSLNLQC---NSEGRCQCKPGVTGDKCDRC-DVNHYDFGE-----AGCKSCE 105
C P+ + + C N RC CK G C+ C V +G + CK C+
Sbjct: 67 PC-PLPEAANFAVSCYRKNGNVRCVCKENYAGPNCESCAGVPPGYYGNPLLIGSTCKKCD 125
Query: 106 CNPAGSVKNT--PNCDSVKGQCES 127
C+ S N +CD V GQC +
Sbjct: 126 CS-GNSDPNLIFEDCDEVTGQCRN 148
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 55/207 (26%), Positives = 84/207 (40%)
Query: 41 CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRC-QCKPGVTGDKCDRCDVNHYDFGEA 99
C++ +Y+ S C+ CNCN G+ N + G C C+ TG+ C++C
Sbjct: 1 CQEGFYRTSSGK-CSPCNCN--GNANRCLDGSGICVDCQRNTTGEHCEQCPDGFVGDVVG 57
Query: 100 G----CKSCECNPAGSVKN-TPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPA--G 152
G C+ C C P N +C G + + E S P G
Sbjct: 58 GAPTFCQPCPC-PLPEAANFAVSCYRKNGNVRCVCKENYAGPNCE----SCAGVPPGYYG 112
Query: 153 NRIWDLRRCKRDTYPLGHGGSLNLQ-CNS-EGRCQ-CKPGVTGDKCDRCDVNHYDFGEA- 208
N + CK+ +L + C+ G+C+ C TG KC++C +Y G+A
Sbjct: 113 NPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLHHTTGFKCEQCAPGYY--GDAI 170
Query: 209 GCKSCE-CNPAGSVKNTPNCDSVKGQC 234
K+C CN G + CDS G+C
Sbjct: 171 FAKNCTACNCGGRM-----CDSRTGEC 192
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 47/170 (27%), Positives = 62/170 (36%)
Query: 89 CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
C Y C C CN G N C G C Q ++ G H E Q F
Sbjct: 1 CQEGFYRTSSGKCSPCNCN--G---NANRCLDGSGICVDCQRNTTGE-HCE---QCPDGF 51
Query: 149 DPAGNRIWDLRR-CKRDTYPLGHGGSLNLQC---NSEGRCQCKPGVTGDKCDRC-DVNHY 203
G+ + C+ PL + + C N RC CK G C+ C V
Sbjct: 52 --VGDVVGGAPTFCQPCPCPLPEAANFAVSCYRKNGNVRCVCKENYAGPNCESCAGVPPG 109
Query: 204 DFGE-----AGCKSCECNPAGSVKNT--PNCDSVKGQCE-CKDNVEGAQC 245
+G + CK C+C+ S N +CD V GQC C + G +C
Sbjct: 110 YYGNPLLIGSTCKKCDCS-GNSDPNLIFEDCDEVTGQCRNCLHHTTGFKC 158
>UNIPROTKB|F1NQD4 [details] [associations]
symbol:F1NQD4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005044 "scavenger receptor activity"
evidence=IEA] [GO:0007157 "heterophilic cell-cell adhesion"
evidence=IEA] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007157 InterPro:IPR002049
Pfam:PF00053 InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
GeneTree:ENSGT00690000101691 EMBL:AADN02043160 EMBL:AADN02043161
IPI:IPI00681360 ProteinModelPortal:F1NQD4
Ensembl:ENSGALT00000033644 OMA:KCENGAS Uniprot:F1NQD4
Length = 342
Score = 165 (63.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 69/248 (27%), Positives = 101/248 (40%)
Query: 17 YNRTGHGGHCL-DCQGDRDGPNCEK---CRDNYY-QKSGDNFCTA------CNCNPIGSL 65
+N+ H L C +R GP CE C+ QK+G C C+ + S
Sbjct: 72 HNQLTHPACALCTCNPNRWGPKCENICLCKHGKCDQKTGKCTCEPNWWGPQCSSSCYCSH 131
Query: 66 NLQCNSE-GRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVK 122
N QC+ + G C C+PG G C+ +C N+ E C+C C K
Sbjct: 132 NSQCDQQTGNCLCQPGWWGRGCNNQCSCNNSPC-EQFTGRCQCRERTFGPRCDRYCQCYK 190
Query: 123 GQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEG 182
G+C Q+ R + + PAG + + C+R G SL ++G
Sbjct: 191 GKCN--QVDGTCTCEPGYRGKYCREPCPAG---FYGQGCRRRC---GQCKSLQPCTVADG 242
Query: 183 RC-QCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE-CKDN 239
RC C+ G G KCD+ C Y GE GC+ C P K+ C+ + G+C C
Sbjct: 243 RCLTCEAGWNGTKCDQPCSAGFY--GE-GCEKL-CPPC---KDGHTCNHINGKCSHCNPG 295
Query: 240 VEGAQCRS 247
G +C +
Sbjct: 296 WIGDRCET 303
Score = 134 (52.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 72/249 (28%), Positives = 95/249 (38%)
Query: 24 GHCLDCQGDRDGPNCEK---CRDNYY--QKSGDNFCT------ACNCNPIGSLNLQCNS- 71
G C C+ + GP C C N Q++G+ C CN N N C
Sbjct: 110 GKCT-CEPNWWGPQCSSSCYCSHNSQCDQQTGNCLCQPGWWGRGCN-NQCSCNNSPCEQF 167
Query: 72 EGRCQCKPGVTGDKCDR-CDV-----NHYDFGEAGC------KSC-ECNPAGSVKNTPNC 118
GRCQC+ G +CDR C N D G C K C E PAG C
Sbjct: 168 TGRCQCRERTFGPRCDRYCQCYKGKCNQVD-GTCTCEPGYRGKYCREPCPAGFYGQ--GC 224
Query: 119 DSVKGQCESAQ--LSSRGRVHT-ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLN 175
GQC+S Q + GR T E K P + C++ P G + N
Sbjct: 225 RRRCGQCKSLQPCTVADGRCLTCEAGWNGTKCDQPCSAGFYG-EGCEKLCPPCKDGHTCN 283
Query: 176 LQCNSEGRCQ-CKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ 233
+ G+C C PG GD+C+ +C Y GE C + C+ S + C G+
Sbjct: 284 ---HINGKCSHCNPGWIGDRCETKCRNGTY--GE-NC-AFVCSDCVSGE----CHFETGR 332
Query: 234 CECKDNVEG 242
C C+ G
Sbjct: 333 CLCRAGSHG 341
Score = 113 (44.8 bits), Expect = 0.00041, P = 0.00041
Identities = 33/111 (29%), Positives = 46/111 (41%)
Query: 5 GFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIG 63
G RC K L T G CL C+ +G C++ C +Y + + C C
Sbjct: 223 GCRRRCGQCKSLQPCTVADGRCLTCEAGWNGTKCDQPCSAGFYGEGCEKLCPPCKDGHT- 281
Query: 64 SLNLQCNS-EGRCQ-CKPGVTGDKCD-RCDVNHYD----FGEAGCKSCECN 107
CN G+C C PG GD+C+ +C Y F + C S EC+
Sbjct: 282 -----CNHINGKCSHCNPGWIGDRCETKCRNGTYGENCAFVCSDCVSGECH 327
>UNIPROTKB|G3V8P3 [details] [associations]
symbol:Celsr2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0021591 "ventricular system development"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00179 SMART:SM00181 SMART:SM00208 SMART:SM00303
InterPro:IPR000152 RGD:69237 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 EMBL:CH473952 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 CTD:1952 KO:K04601
OMA:YILRAYA UniGene:Rn.222746 RefSeq:NP_001178039.1
Ensembl:ENSRNOT00000027263 GeneID:83465 KEGG:rno:83465
NextBio:615853 Uniprot:G3V8P3
Length = 2919
Score = 174 (66.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 41/99 (41%), Positives = 51/99 (51%)
Query: 21 GHGGH--CLDCQGD-RDG--PNCEK------CRDNYYQKSGDNFCTACNCNPIGSLNLQC 69
G GH C C D G P+C K C++N+Y+ C C+C P GSL+ C
Sbjct: 1877 GWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKENHYRPPSSPTCLLCDCYPTGSLSRVC 1936
Query: 70 NSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 107
+ E G+C CKPGV G +CDRCD N F E CE N
Sbjct: 1937 DPEDGQCPCKPGVIGRQCDRCD-N--PFAEVTTNGCEVN 1972
Score = 140 (54.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 59/196 (30%), Positives = 77/196 (39%)
Query: 61 PIGSLNLQCNSEGRCQCKPGVTG-DKCDR--CDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
P G +L + +PG + D CD C N Y + SC C+P N N
Sbjct: 1771 PEGVSSLDPSRGESINVEPGCSWPDPCDSNPCPTNSYCSNDWDSYSCSCDPGYYGDNCTN 1830
Query: 118 -CDSVKGQCESAQLSSR--GRVHTELRVQSRKNF-DP-AGNRIWDLRRCKRDTYPLGHGG 172
CD CE + +R H + + N+ P RI D + C R + GH
Sbjct: 1831 VCDL--NPCEHQSVCTRKPSAPHGYI-CECLPNYLGPYCETRI-D-QPCPRGWW--GHPT 1883
Query: 173 SLNLQCN-SEG-RCQCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDS 229
C+ S+G C T +C C NHY C C+C P GS+ CD
Sbjct: 1884 CGPCNCDVSKGFDPDCNK--TSGEC-HCKENHYRPPSSPTCLLCDCYPTGSLSRV--CDP 1938
Query: 230 VKGQCECKDNVEGAQC 245
GQC CK V G QC
Sbjct: 1939 EDGQCPCKPGVIGRQC 1954
Score = 138 (53.6 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 56/172 (32%), Positives = 71/172 (41%)
Query: 50 GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT-GDKCDRCDVNHYD-FGEAGC-KSCEC 106
GDN C+ NP C + C KP G C+ C N+ + E + C
Sbjct: 1825 GDNCTNVCDLNP-------CEHQSVCTRKPSAPHGYICE-CLPNYLGPYCETRIDQPCPR 1876
Query: 107 NPAGSVKNTP-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
G P NCD KG +S G H + ++ P + L C D
Sbjct: 1877 GWWGHPTCGPCNCDVSKGFDPDCNKTS-GECHCK-----ENHYRPPSSPTCLL--C--DC 1926
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
YP G SL+ C+ E G+C CKPGV G +CDRCD N F E CE N
Sbjct: 1927 YPTG---SLSRVCDPEDGQCPCKPGVIGRQCDRCD-N--PFAEVTTNGCEVN 1972
Score = 61 (26.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 29/90 (32%), Positives = 40/90 (44%)
Query: 1 CNCN-GFS-NRCFFDKEL-YNRT-GHGGHCLDCQGD-----RDGPNCEKCRDNYYQKSGD 51
C C GF+ + C + +L Y+R G GHC +G RDG E C + +SG
Sbjct: 1274 CRCPPGFTGDYCETEVDLCYSRPCGPHGHCRSREGGYTCLCRDGYTGEHCEVS--ARSGR 1331
Query: 52 NFCTACNCNPIGS-LNLQCNSEGRCQCKPG 80
CT C G+ +NL +C C G
Sbjct: 1332 --CTPGVCKNGGTCVNLLVGGF-KCDCPSG 1358
>FB|FBgn0027594 [details] [associations]
symbol:drpr "draper" species:7227 "Drosophila melanogaster"
[GO:0007155 "cell adhesion" evidence=ISS] [GO:0008345 "larval
locomotory behavior" evidence=IMP] [GO:0006909 "phagocytosis"
evidence=IMP;TAS] [GO:0031224 "intrinsic to membrane" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016322 "neuron
remodeling" evidence=IMP] [GO:0035212 "cell competition in a
multicellular organism" evidence=IMP] [GO:0048190 "wing disc
dorsal/ventral pattern formation" evidence=IGI] [GO:0043277
"apoptotic cell clearance" evidence=IMP] [GO:0035071 "salivary
gland cell autophagic cell death" evidence=IMP] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0048190 EMBL:AE014296 GO:GO:0016322 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0008345 GO:GO:0035071
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0031224
GO:GO:0043277 Pfam:PF12661 GO:GO:0035212
GeneTree:ENSGT00690000101914 RefSeq:NP_728660.2 UniGene:Dm.3167
ProteinModelPortal:Q9W0A0 SMR:Q9W0A0 DIP:DIP-19640N
MINT:MINT-7555415 STRING:Q9W0A0 EnsemblMetazoa:FBtr0072799
GeneID:38218 KEGG:dme:Dmel_CG2086 UCSC:CG2086-RB CTD:38218
FlyBase:FBgn0027594 InParanoid:Q9W0A0 OMA:ALCDHIS OrthoDB:EOG4RXWF6
ChiTaRS:drpr GenomeRNAi:38218 NextBio:807575 Bgee:Q9W0A0
Uniprot:Q9W0A0
Length = 1031
Score = 169 (64.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 73/259 (28%), Positives = 100/259 (38%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLD-CQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCN 60
C FS C K Y G C D C G NC EKCR K + C C
Sbjct: 153 CEPFSGDCECAKG-YT----GARCADICPEGFFGANCSEKCRCENGGKC-HHVSGECQCA 206
Query: 61 PIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPA--GSV-KNTP 116
P G C+ +C G G +C + C + + +C CNP G V N
Sbjct: 207 P-GFTGPLCDM----RCPDGKHGAQCQQDCPCQNDGKCQPETGACMCNPGWTGDVCANKC 261
Query: 117 NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
S C+ + +G + Q G R +D C+ +TY G S+
Sbjct: 262 PVGSYGPGCQESCECYKGAPCHHITGQCECPPGYRGERCFD--ECQLNTY--GFNCSMTC 317
Query: 177 QCNSE-------GRCQCKPGVTGDKC-DR-CDVNHYDFGEAGC-KSCECNPAGSVKNTPN 226
C ++ G C C PG TG KC +R C+ N Y C ++CEC+ +++T
Sbjct: 318 DCANDAMCDRANGTCICNPGWTGAKCAERICEANKYGLD---CNRTCECD----MEHTDL 370
Query: 227 CDSVKGQCECKDNVEGAQC 245
C G C+C AQC
Sbjct: 371 CHPETGNCQCSIGWSSAQC 389
Score = 168 (64.2 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 76/279 (27%), Positives = 110/279 (39%)
Query: 1 CNCNGFSNRCFFDKELYNRT---GHGGHCLDCQGDRDGPNCEK--CRDNYYQKSGDNFCT 55
C N + C + N G C+ C G C + C N Y G +
Sbjct: 304 CQLNTYGFNCSMTCDCANDAMCDRANGTCI-CNPGWTGAKCAERICEANKY---GLDCNR 359
Query: 56 ACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDR-CDVNHYDFG---EAGCKS-CECNPA 109
C C+ + +L C+ E G CQC G + +C R C Y CK+ +C+P
Sbjct: 360 TCECD-MEHTDL-CHPETGNCQCSIGWSSAQCTRPCTFLRYGPNCELTCNCKNGAKCSP- 416
Query: 110 GSVKNTPNC-DSVKGQ-CE-SAQLSSRGRVHTELRV--QSRKNFDP-AGNRI----WDLR 159
V T C +G CE S + + G+ LR Q+ +P G + W
Sbjct: 417 --VNGTCLCAPGWRGPTCEESCEPGTFGQ-DCALRCDCQNGAKCEPETGQCLCTAGWKNI 473
Query: 160 RCKRDTYPLGHGGS---------LNLQCNSE-GRCQCKPGVTGDKCDR-CDVNHYDFGEA 208
+C R L H G N CN + G C C G TG++C+R CD FG
Sbjct: 474 KCDRPC-DLNHFGQDCAKVCDCHNNAACNPQNGSCTCAAGWTGERCERKCDTGK--FGHD 530
Query: 209 GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ C+C+ N+ CD+ G+C CK + G C +
Sbjct: 531 CAQKCQCD----FNNSLACDATNGRCVCKQDWGGVHCET 565
Score = 126 (49.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 65/247 (26%), Positives = 85/247 (34%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACN---CNPI-GSLNLQCNSEG-RCQ- 76
G CL C C++ C N++ + C N CNP GS G RC+
Sbjct: 462 GQCL-CTAGWKNIKCDRPCDLNHFGQDCAKVCDCHNNAACNPQNGSCTCAAGWTGERCER 520
Query: 77 -CKPGVTGDKCDR---CDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDS-VKGQ-----C 125
C G G C + CD N+ +A C C G V NC S G+ C
Sbjct: 521 KCDTGKFGHDCAQKCQCDFNNSLACDATNGRCVCKQDWGGVHCETNCRSGYYGENCDKVC 580
Query: 126 ESAQLSS----RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS- 180
SS G +P + + CK + HG N C+
Sbjct: 581 RCLNNSSCDPDSGNCICSAGWTGADCAEPCPPGFYGME-CKERCPEILHG---NKSCDHI 636
Query: 181 EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCECKD 238
G C+ G G C+ C Y GCK C C G C+ V GQC+C
Sbjct: 637 TGEILCRTGYIGLTCEHPCPAGLYG---PGCKLKCNCEHGGE------CNHVTGQCQCLP 687
Query: 239 NVEGAQC 245
G+ C
Sbjct: 688 GWTGSNC 694
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 32 DRDGPNCEKCRDNY 45
D DGPN K R+ Y
Sbjct: 22 DLDGPNICKRRELY 35
>ZFIN|ZDB-GENE-050208-404 [details] [associations]
symbol:celsr2l "cadherin, EGF LAG seven-pass G-type
receptor 2, like" species:7955 "Danio rerio" [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0007166 "cell surface receptor
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR017981 Pfam:PF00002 Pfam:PF00008
Pfam:PF01825 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 SMART:SM00179 SMART:SM00181 SMART:SM00303
ZFIN:ZDB-GENE-050208-404 GO:GO:0016021 GO:GO:0005886 GO:GO:0004930
GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR022624
Pfam:PF12003 GeneTree:ENSGT00700000104170 Pfam:PF02210
EMBL:AL645789 IPI:IPI00502412 Ensembl:ENSDART00000082453
Bgee:F1QT64 Uniprot:F1QT64
Length = 1478
Score = 170 (64.9 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G DC ++ C +C+DN+++ + C C+C +GSL+ C+ + G+CQCKPGV
Sbjct: 500 GFDADC--NKTNGAC-RCKDNHFRPPSSDTCVLCDCYAVGSLSRVCDRAVGQCQCKPGVI 556
Query: 83 GDKCDRCDVNHYDFGEAGCK 102
G +CDRCD + +GC+
Sbjct: 557 GRQCDRCDNPFAEVSSSGCE 576
Score = 125 (49.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 54/169 (31%), Positives = 76/169 (44%)
Query: 52 NFCT-ACNCNPIGSLNLQCNSEGRCQCKPGVT-GDKCDRCDVNHYDFGEAGCKSCE--CN 107
N CT AC NP C + C + G C C N+ FG+ K + C
Sbjct: 432 NSCTDACALNP-------CEHQSACSRRSSSAHGYTCS-CPSNY--FGQYCEKKTDLPC- 480
Query: 108 PAG--SVKNT-P-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKR 163
P G K+ P NCD+ KG A + + + R + +F P + L C
Sbjct: 481 PRGWWGEKSCGPCNCDTTKGF--DADCN---KTNGACRCKDN-HFRPPSSDTCVL--C-- 530
Query: 164 DTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
D Y +G SL+ C+ + G+CQCKPGV G +CDRCD + +GC+
Sbjct: 531 DCYAVG---SLSRVCDRAVGQCQCKPGVIGRQCDRCDNPFAEVSSSGCE 576
Score = 40 (19.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 23 GGHCLDCQGDRDGPNCEKCRDNYYQKSG 50
G DC G NCEK N + G
Sbjct: 200 GSFRCDCALGFGGRNCEKVMSNPLRLQG 227
>FB|FBgn0261451 [details] [associations]
symbol:trol "terribly reduced optic lobes" species:7227
"Drosophila melanogaster" [GO:0005578 "proteinaceous extracellular
matrix" evidence=NAS] [GO:0005604 "basement membrane" evidence=ISS]
[GO:0055059 "asymmetric neuroblast division" evidence=NAS]
[GO:0045199 "maintenance of epithelial cell apical/basal polarity"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0072347 "response to anesthetic" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0005811 EMBL:AE014298 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 InterPro:IPR013098
Pfam:PF07679 GO:GO:0045199 GO:GO:0072347 InterPro:IPR009030
SUPFAM:SSF57184 Pfam:PF02210 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 UniGene:Dm.14114
GeneID:45320 KEGG:dme:Dmel_CG33950 CTD:45320 FlyBase:FBgn0261451
ChiTaRS:trol GenomeRNAi:45320 NextBio:838006 RefSeq:NP_001027038.2
ProteinModelPortal:Q9W4Y3 SMR:Q9W4Y3 STRING:Q9W4Y3 PRIDE:Q9W4Y3
UCSC:CG33950-RF InParanoid:Q9W4Y3 PhylomeDB:Q9W4Y3
ArrayExpress:Q9W4Y3 Bgee:Q9W4Y3 Uniprot:Q9W4Y3
Length = 4629
Score = 144 (55.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 51/170 (30%), Positives = 71/170 (41%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCESA 128
+C+C G G C++C + E G C+ CECN G K C+S G CE
Sbjct: 2428 QCRCPEGYLGLSCEQCAPGYARDPEGGIYLGLCRPCECN--GHSKY---CNSDTGDCEEC 2482
Query: 129 QLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT-YPLGHG---GSLNLQCNS---- 180
++ G E R + D I+D C+ D YP+ G+ L+C +
Sbjct: 2483 SDNTEGP-SCE-RCAAGYVGDATRGTIYD---CQPDEGYPIPSPPAPGNQTLECTAYCQI 2537
Query: 181 EG-------RCQCKPGVTGDKCDRCDVNHYDFG---EAGCKSCECNPAGS 220
EG C CK V GD+CD+C Y + GCK C C+ S
Sbjct: 2538 EGIYDCRGNECLCKRNVIGDQCDQCRPGTYGLSAQNQDGCKECYCSGLAS 2587
Score = 128 (50.1 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 25/66 (37%), Positives = 31/66 (46%)
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG---QCECKDNV 240
CQC G G C+ C HY C C C+ V NT +CD V G +C CK
Sbjct: 2779 CQCPSGYVGTSCESCAPLHYRDASGSCSLCPCD----VSNTESCDLVSGGYVECRCKARW 2834
Query: 241 EGAQCR 246
+G +CR
Sbjct: 2835 KGDRCR 2840
Score = 110 (43.8 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 26/69 (37%), Positives = 33/69 (47%)
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSVKGQCE-C 236
+C+C G G C++C + E G C+ CECN G K C+S G CE C
Sbjct: 2428 QCRCPEGYLGLSCEQCAPGYARDPEGGIYLGLCRPCECN--GHSKY---CNSDTGDCEEC 2482
Query: 237 KDNVEGAQC 245
DN EG C
Sbjct: 2483 SDNTEGPSC 2491
Score = 101 (40.6 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 39/145 (26%), Positives = 56/145 (38%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNF-CTAC 57
C CNG S C D G C +C + +GP+CE+C Y + G + C
Sbjct: 2463 CECNGHSKYCNSDT---------GDCEECSDNTEGPSCERCAAGYVGDATRGTIYDCQPD 2513
Query: 58 NCNPI------GSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAG- 110
PI G+ L+C + CQ + G+ + + C G+ C C G
Sbjct: 2514 EGYPIPSPPAPGNQTLECTAY--CQIE-GIYDCRGNECLCKRNVIGDQ-CDQCRPGTYGL 2569
Query: 111 SVKNTPNC-----DSVKGQCESAQL 130
S +N C + QC SA L
Sbjct: 2570 SAQNQDGCKECYCSGLASQCRSAAL 2594
Score = 93 (37.8 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 26/89 (29%), Positives = 34/89 (38%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN--PIGSLNLQ----CNSEGRCQCKPGVT 82
C G CE+C Y G+ C P S N+ +S G CQCK V
Sbjct: 2139 CNEGYTGRRCEQCAAGY---QGNPLAAGGICRRIPDTSCNVDGTYSVHSNGTCQCKDSVI 2195
Query: 83 GDKCDRCDVNHYDFGEAGCKSC-ECNPAG 110
G++CD C + C EC +G
Sbjct: 2196 GEQCDTCKSKSFHLNSFTYTGCIECFCSG 2224
Score = 86 (35.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 24/80 (30%), Positives = 34/80 (42%)
Query: 35 GPNCEKCRDNYYQK-SGDNF---CTACNCNPIGSLNLQCNSE-GRCQ-CKPGVTGDKCDR 88
G +CE+C Y + G + C C CN G + CNS+ G C+ C G C+R
Sbjct: 2437 GLSCEQCAPGYARDPEGGIYLGLCRPCECN--GH-SKYCNSDTGDCEECSDNTEGPSCER 2493
Query: 89 CDVNHYDFGEAGCKSCECNP 108
C + G +C P
Sbjct: 2494 CAAGYVGDATRGT-IYDCQP 2512
Score = 85 (35.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 33/115 (28%), Positives = 49/115 (42%)
Query: 31 GD-RDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC 89
GD R G C++C +NF + C +P G + C+C G TG +C++C
Sbjct: 2102 GDPRRGVPCKECPCPL--TGSNNFASGCQQSPDGDVV--------CRCNEGYTGRRCEQC 2151
Query: 90 DVNHYD--FGEAG-CK---SCECNPAG--SVKNTPNC---DSVKG-QCESAQLSS 132
+ G C+ CN G SV + C DSV G QC++ + S
Sbjct: 2152 AAGYQGNPLAAGGICRRIPDTSCNVDGTYSVHSNGTCQCKDSVIGEQCDTCKSKS 2206
Score = 67 (28.6 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 74 RCQCKPGVTGDKCDRC 89
+CQC PG GD C+ C
Sbjct: 2057 KCQCPPGYVGDSCESC 2072
Score = 59 (25.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/84 (29%), Positives = 36/84 (42%)
Query: 27 LDCQGDRDGPNCEKCRDNYYQKSGDNFC------TACNCNPIGSLNLQCNSEGRCQCKPG 80
L CQ ++ + KC D ++ G+N C T+C+ P G+ C QC+ G
Sbjct: 1655 LKCQPNQFMCSNSKCVDRTWRCDGENDCGDNSDETSCDPEPSGA---PCRYN-EFQCRSG 1710
Query: 81 VTGDKCDRCD-VNHYDFG--EAGC 101
K +CD V G E GC
Sbjct: 1711 HCIPKSFQCDNVPDCTDGTDEVGC 1734
Score = 58 (25.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 22/60 (36%), Positives = 25/60 (41%)
Query: 28 DCQGDRDGPNCEKCR-DNYYQKSGDNFCTACN--CNPI-----GSLNLQCNSEGRCQCKP 79
+CQ D NC CR D Y +G+ C A N CN I GS C R C P
Sbjct: 1049 NCQDGSDERNCTFCREDAYLCNTGE--CVADNQRCNGIADCADGSDERHC---ARIYCPP 1103
Score = 56 (24.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 24/89 (26%), Positives = 37/89 (41%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA 99
+C D G+ C+ + SL L+C + C D+ RCD + D G+
Sbjct: 1628 ECIDKSSICDGNPDCSDASDEQSCSLGLKCQPN-QFMCSNSKCVDRTWRCDGEN-DCGDN 1685
Query: 100 GCK-SCECNPAGSV--KNTPNCDSVKGQC 125
+ SC+ P+G+ N C S G C
Sbjct: 1686 SDETSCDPEPSGAPCRYNEFQCRS--GHC 1712
Score = 53 (23.7 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 46/198 (23%), Positives = 72/198 (36%)
Query: 11 FFDKELYNRTGH-GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCN-----PIGS 64
+ D+ YNR+ GH +DC D C + SG + + C+ GS
Sbjct: 1217 YCDESCYNRSVRCNGH-VDCSDGSDEVGCSLPCPQHQCPSGRCYTESERCDRHRHCEDGS 1275
Query: 65 LNLQCNSEGRCQCKPGVTGDK--C----DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 118
C + C+ + D+ C +CD +YD + S E N G N C
Sbjct: 1276 DEANCTAI-LCKDNEFLCFDRQFCINATQQCD-GYYDCRDF---SDEQNCIGCYANQFRC 1330
Query: 119 DSVKGQCESAQLSSRGRVHTELRVQSRK-NFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ 177
++ G C S G ++E S + N + + RC G S +++
Sbjct: 1331 NN--GDCVSGSAPCNG--YSECSDHSDELNCGGTQECLPNQFRCNS-----GQCVSSSVR 1381
Query: 178 CNSEGRCQCKPGVTGDKC 195
CN GR C+ C
Sbjct: 1382 CN--GRTDCQDSSDEQNC 1397
Score = 51 (23.0 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 23/100 (23%), Positives = 38/100 (38%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHY 94
G +CE C Y ++ G + +C P + C S + GV +C C +
Sbjct: 2066 GDSCESCASGYVRQPGGPWLG--HCVPF--IPDSCPSGTYGDPRRGVPCKECP-CPLTGS 2120
Query: 95 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
+ +GC+ +P G V N +CE +G
Sbjct: 2121 NNFASGCQQ---SPDGDVVCRCNEGYTGRRCEQCAAGYQG 2157
Score = 48 (22.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 19/72 (26%), Positives = 29/72 (40%)
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK-SC----ECNPAGSVKN 114
N +GS +E + C G DK CD N D +A + SC +C P + +
Sbjct: 1607 NDVGSRPESACTEYQATCMNGECIDKSSICDGNP-DCSDASDEQSCSLGLKCQPNQFMCS 1665
Query: 115 TPNCDSVKGQCE 126
C +C+
Sbjct: 1666 NSKCVDRTWRCD 1677
>MGI|MGI:2446294 [details] [associations]
symbol:Megf8 "multiple EGF-like-domains 8" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0060287
"epithelial cilium movement involved in determination of left/right
asymmetry" evidence=IMP] [GO:0061371 "determination of heart
left/right asymmetry" evidence=ISO;IMP] [GO:0071907 "determination
of digestive tract left/right asymmetry" evidence=ISO;IMP]
[GO:1900164 "nodal signaling pathway involved in determination of
lateral mesoderm left/right asymmetry" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002165
InterPro:IPR015915 InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:2446294 GO:GO:0016021 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 CTD:1954 eggNOG:NOG304142
HOVERGEN:HBG108128 OMA:GHSMVFH EMBL:EU723517 EMBL:BC031185
EMBL:BC036727 EMBL:BC051121 EMBL:BC060277 EMBL:AK122377
EMBL:AK030408 IPI:IPI00930841 RefSeq:NP_001153872.1
UniGene:Mm.38527 ProteinModelPortal:P60882 SMR:P60882
PhosphoSite:P60882 PaxDb:P60882 PRIDE:P60882
Ensembl:ENSMUST00000128119 GeneID:269878 KEGG:mmu:269878
UCSC:uc009fsj.2 InParanoid:B3GR00 OrthoDB:EOG4JHCDR NextBio:393077
Bgee:P60882 CleanEx:MM_MEGF8 Genevestigator:P60882
GermOnline:ENSMUSG00000045039 Uniprot:P60882
Length = 2789
Score = 145 (56.1 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 31/92 (33%), Positives = 46/92 (50%)
Query: 160 RCKRDTYPLGHGGSLNLQCNSEGR--C-QCKPGVTGDKCDRCDVNHYD--FGEAGCKSCE 214
RC RD G S + C G C +C+ G+ C+RC + G GC+ C+
Sbjct: 1158 RCSRDC-----GCSFHSHCRRRGPGYCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQ 1212
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CN G + +CD++ G C C+D+ EGA C+
Sbjct: 1213 CNGHGDPRRG-HCDNLTGLCFCQDHTEGAHCQ 1243
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 63/249 (25%), Positives = 93/249 (37%)
Query: 22 HGGH-CLDCQGDRDGPN---CEKCRDNYYQKSGDNFCTACNCNPI---GSLNLQCNSEGR 74
+G H C + Q D P+ C C+ Y DN C P+ G +N C
Sbjct: 2128 NGHHDCNETQNCHDQPHGYECS-CKTGYTM---DNVTGVCR--PVCAQGCVNGSCVEPDH 2181
Query: 75 CQCKPGVTGDKCD-RCDVN-HYDFGEAG----CKSCECNPAGSVKNTPNCDSV------- 121
C+C G G C C N H + G C C + GS + C +
Sbjct: 2182 CRCHFGFVGRNCSTECRCNRHSECAGVGAQDHCLLCRNHTKGS--HCEQCLPLFVGSALG 2239
Query: 122 KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI--WDLRRCKRDTYPLGHGGSLNLQCN 179
G C RG H + SRK + A + L + +T+ + G S
Sbjct: 2240 GGTCRPCHAFCRGNSHVCV---SRKELEMARKEPEKYSLDPEEIETW-VAEGPS-----E 2290
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECK 237
E C C+ GD+C+ C ++ Y + C C+CN G + C+ G C C+
Sbjct: 2291 DEAVCVNCQNNSYGDRCESC-LHGYFLLDGKCTKCQCN--G---HADTCNEQDGTGCPCQ 2344
Query: 238 DNVEGAQCR 246
+N E C+
Sbjct: 2345 NNTETGTCQ 2353
Score = 124 (48.7 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 37/119 (31%), Positives = 48/119 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C C+ F + C R G G +C +CQ G +CE+CR + +G C C C
Sbjct: 1163 CGCS-FHSHC-------RRRGPG-YCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQC 1213
Query: 60 NPIGSLNL-QC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC--ECNPAGSVKN 114
N G C N G C C+ G C C +Y AG SC EC + N
Sbjct: 1214 NGHGDPRRGHCDNLTGLCFCQDHTEGAHCQICSPGYYGDPRAG-GSCFRECGGRALLTN 1271
Score = 76 (31.8 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 23/71 (32%), Positives = 27/71 (38%)
Query: 43 DNYYQKSGDNFCTACNCNPIGSLNL-QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 101
D Y G N + P G N QC S G C C+PG G C + + Y C
Sbjct: 125 DANYNLLGFNASFRFSLCPGGCQNHGQCKSPGVCVCEPGWGGPDCGLQECSAYCGSHGTC 184
Query: 102 KS----CECNP 108
S C C P
Sbjct: 185 ASTLGPCRCEP 195
Score = 57 (25.1 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 54 CTACNCNPI-GSLNLQCNSEGRCQCKPGVTGDKCD 87
C C+ GS ++ G C+C+PG G CD
Sbjct: 169 CGLQECSAYCGSHGTCASTLGPCRCEPGFLGRACD 203
Score = 44 (20.5 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 23/84 (27%), Positives = 28/84 (33%)
Query: 172 GSLNLQCNSEGRC----QCKP--GVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKN 223
GS G C +C P G G RC G AG C+ C P +
Sbjct: 1403 GSARCGSGGPGSCPVPQECVPQDGAAGAGLCRCPQ-----GWAGPHCRMALC-PENCNAH 1456
Query: 224 TPN--CDSVKGQCECKDNVEGAQC 245
T C+ G C C + G C
Sbjct: 1457 TGAGICNQSLGVCICAEGFGGPDC 1480
Score = 36 (17.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQC 77
C AC +P + N +G C
Sbjct: 907 CHACTQDPFCEWHQSTNRKGDAAC 930
>ZFIN|ZDB-GENE-070122-2 [details] [associations]
symbol:celsr2 "cadherin, EGF LAG seven-pass G-type
receptor 2" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;IDA] [GO:0007166 "cell surface receptor signaling
pathway" evidence=IEA] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IGI;IDA;IMP] [GO:0055113 "epiboly involved in gastrulation
with mouth forming second" evidence=IGI] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=IGI] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00303
ZFIN:ZDB-GENE-070122-2 GO:GO:0016021 GO:GO:0005886 GO:GO:0008104
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0016337 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 GO:GO:0055113 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 OrthoDB:EOG4KKZ23 CTD:1952
KO:K04601 GO:GO:0021754 EMBL:AB246774 IPI:IPI00502412
RefSeq:NP_001074046.1 UniGene:Dr.110394 ProteinModelPortal:A0JBX1
STRING:A0JBX1 GeneID:560426 KEGG:dre:560426 InParanoid:A0JBX1
NextBio:20883440 Uniprot:A0JBX1
Length = 2941
Score = 170 (64.9 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGVT 82
G DC ++ C +C+DN+++ + C C+C +GSL+ C+ + G+CQCKPGV
Sbjct: 1962 GFDADC--NKTNGAC-RCKDNHFRPPSSDTCVLCDCYAVGSLSRVCDRAVGQCQCKPGVI 2018
Query: 83 GDKCDRCDVNHYDFGEAGCK 102
G +CDRCD + +GC+
Sbjct: 2019 GRQCDRCDNPFAEVSSSGCE 2038
>WB|WBGene00018304 [details] [associations]
symbol:agr-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0005605 "basal lamina" evidence=IDA] InterPro:IPR000742
InterPro:IPR002350 Pfam:PF00050 Pfam:PF07648 SMART:SM00181
SMART:SM00280 GO:GO:0009792 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 KO:K06254
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00274 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR011497
GeneTree:ENSGT00530000063501 Pfam:PF02210 EMBL:AM773423
EMBL:FO081361 RefSeq:NP_001022152.3 UniGene:Cel.24197
ProteinModelPortal:G5EG68 SMR:G5EG68 EnsemblMetazoa:F41G3.12
GeneID:3565243 KEGG:cel:CELE_F41G3.12 CTD:3565243 WormBase:F41G3.12
OMA:SARICGE NextBio:955733 Uniprot:G5EG68
Length = 1473
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 59/230 (25%), Positives = 97/230 (42%)
Query: 31 GDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRC-QCKPGVTG--DKC 86
G+ + C KC D+ + C + + + + +C+ + C Q K +T KC
Sbjct: 535 GENEKAEC-KCPDDCPSYEMEEGKEVCGTDGV-TYSSECHMKKSACHQSKFVMTAFEGKC 592
Query: 87 DRCDVNHYDFGEAGCKS--CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQS 144
D C +GE C+S C C+ N P + G E+ L H L++ S
Sbjct: 593 DECLHVQCRYGEE-CRSGVCVCS-YNCPANPPLSARICG--ENGVLYP-SLCH--LQLAS 645
Query: 145 RKNFDPAGNRIWDLRRCKRDTYP----LGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDV 200
+ P + ++P GS C+ G+C+C+PGV G KCD C
Sbjct: 646 CQKGAPISEMPPSHCHSSKTSFPDSCQCNRVGSFGHTCDETGQCKCRPGVAGIKCDHCLP 705
Query: 201 NHYDF-----GEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ + G C+ C C+ GS ++ +C+ G+CECK+ G +C
Sbjct: 706 SFWGIHLIAQGALSCRPCGCSAFGSSRS--DCEQTTGKCECKNGALGDKC 753
>MGI|MGI:2685177 [details] [associations]
symbol:Megf10 "multiple EGF-like-domains 10" species:10090
"Mus musculus" [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0014719 "satellite cell activation"
evidence=IMP] [GO:0014816 "satellite cell differentiation"
evidence=ISO;IMP] [GO:0014841 "satellite cell proliferation"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IMP;IDA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0051147 "regulation of muscle cell
differentiation" evidence=ISO] [GO:0055001 "muscle cell
development" evidence=ISO] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 MGI:MGI:2685177
GO:GO:0016021 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 HSSP:P01132
GO:GO:0051147 CTD:84466 HOVERGEN:HBG108333 OMA:FGCNLTC
GO:GO:0014719 GO:GO:0014841 EMBL:AK147238 EMBL:AK148084
EMBL:AK166316 EMBL:BC075647 IPI:IPI00453778 RefSeq:NP_001001979.1
UniGene:Mm.297863 ProteinModelPortal:Q6DIB5 SMR:Q6DIB5
STRING:Q6DIB5 PhosphoSite:Q6DIB5 PRIDE:Q6DIB5
Ensembl:ENSMUST00000075770 Ensembl:ENSMUST00000139892 GeneID:70417
KEGG:mmu:70417 UCSC:uc008eyz.2 InParanoid:Q6DIB5 OrthoDB:EOG42JNQJ
ChiTaRS:MEGF10 NextBio:331567 Bgee:Q6DIB5 CleanEx:MM_MEGF10
Genevestigator:Q6DIB5 Uniprot:Q6DIB5
Length = 1147
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 78/268 (29%), Positives = 109/268 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH-GGHCLD-CQGDRDGPNCEK---CRDN--YYQKSGDNF 53
C C + E G+ G C D C + GP+CE+ C++ + +G+
Sbjct: 195 CQCQNGATCDHITGECRCSPGYTGAFCEDLCPPGKHGPHCEQRCPCQNGGVCHHVTGECS 254
Query: 54 C------TACN--CNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSC 104
C T C C P G C+ E CQC G T D +C + GE C+
Sbjct: 255 CPSGWMGTVCGQPC-PEGRFGKNCSQE--CQCHNGGTCDAATGQCHCSPGYTGER-CQD- 309
Query: 105 ECNPAGS--VKNTPNCDSVKG-QCE--SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
EC P GS V+ C V G +C S EL ++R P G ++ ++
Sbjct: 310 EC-PVGSYGVRCAEACRCVNGGKCYHVSGTCLCEAGFSGEL-CEAR--LCPEG--LYGIK 363
Query: 160 RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNP 217
KR L + S C+ G C CKPG +G C+ C Y GEA + C C
Sbjct: 364 CDKRCPCHLDNTHS----CHPMSGECGCKPGWSGLYCNETCSPGFY--GEACQQICSC-- 415
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+N +CDSV G+C C +G C
Sbjct: 416 ----QNGADCDSVTGRCACAPGFKGTDC 439
Score = 161 (61.7 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 65/249 (26%), Positives = 90/249 (36%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C C G C + C + + G N C C+ G+ + + G+C C PG T
Sbjct: 251 GEC-SCPSGWMGTVCGQPCPEGRF---GKNCSQECQCHNGGTCDA---ATGQCHCSPGYT 303
Query: 83 GDKC-DRCDVNHYDFGEA-GCKSCECNPAGSVKNTPNCDS-VKGQ-CESAQLSSRGR--V 136
G++C D C V Y A C+ V T C++ G+ CE A+L G +
Sbjct: 304 GERCQDECPVGSYGVRCAEACRCVNGGKCYHVSGTCLCEAGFSGELCE-ARLCPEGLYGI 362
Query: 137 HTELR----VQSRKNFDPAGNRI-----WDLRRCKRDTYPLGHGGSLNLQCNSE------ 181
+ R + + + P W C P +G + C+ +
Sbjct: 363 KCDKRCPCHLDNTHSCHPMSGECGCKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCD 422
Query: 182 ---GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCEC 236
GRC C PG G C C + Y C S C C KN C V G C C
Sbjct: 423 SVTGRCACAPGFKGTDCSTPCPLGRYGIN---CSSRCGC------KNDAVCSPVDGSCIC 473
Query: 237 KDNVEGAQC 245
K G C
Sbjct: 474 KAGWHGVDC 482
Score = 153 (58.9 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 70/260 (26%), Positives = 101/260 (38%)
Query: 9 RCFFDKELYNRTGHGG-HCLD-CQGDRDGPNCEKCRDNYYQKSGDNFCT-ACNCNPIGSL 65
RC G GG +C C GD GP+C R ++ N T AC+C G
Sbjct: 117 RCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSS-RCQCKNRALCNPITGACHC-AAGYR 174
Query: 66 NLQCNSEGRCQCKPGVTGDKC-DRCDVNH-----YDFGEAGCKS------CE--CNPAGS 111
+C E RC+ G G+ C RC + + GE C CE C P
Sbjct: 175 GWRC--EDRCE--QGTYGNDCHQRCQCQNGATCDHITGECRCSPGYTGAFCEDLCPPG-- 228
Query: 112 VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR---RCKRDTYPL 168
K+ P+C+ + C++ + V E S G + R C ++
Sbjct: 229 -KHGPHCEQ-RCPCQNGGVCHH--VTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQ-C 283
Query: 169 GHGGSLNLQCNSEGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
+GG+ + + G+C C PG TG++C D C V Y G ++C C G C
Sbjct: 284 HNGGTCDA---ATGQCHCSPGYTGERCQDECPVGSY--GVRCAEACRCVNGGK------C 332
Query: 228 DSVKGQCECKDNVEGAQCRS 247
V G C C+ G C +
Sbjct: 333 YHVSGTCLCEAGFSGELCEA 352
Score = 152 (58.6 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 72/252 (28%), Positives = 94/252 (37%)
Query: 24 GHCLDCQGDRDGPNCEK--CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
G CL C+ G CE C + Y D C C+ + S C+ G C CKPG
Sbjct: 337 GTCL-CEAGFSGELCEARLCPEGLYGIKCDKRCP-CHLDNTHS----CHPMSGECGCKPG 390
Query: 81 VTGDKCDR-CDVNHYDFGEAGCKSCEC-NPAGSVKNTPNCDSVKG----QCESAQLSSRG 134
+G C+ C Y GEA + C C N A T C G C + R
Sbjct: 391 WSGLYCNETCSPGFY--GEACQQICSCQNGADCDSVTGRCACAPGFKGTDCSTPCPLGRY 448
Query: 135 RVHTELRVQSRKNF--DPA-GNRI----W---DLR-RCKRDTYPLGHGGSLNLQC----- 178
++ R + + P G+ I W D RC T+ G G +L QC
Sbjct: 449 GINCSSRCGCKNDAVCSPVDGSCICKAGWHGVDCSIRCPSGTW--GFGCNLTCQCLNGGA 506
Query: 179 -NS-EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
N+ +G C C PG G KC+ C Y A + C+C+ A C G C
Sbjct: 507 CNTLDGTCTCAPGWRGAKCEFPCQDGTYGLNCA--ERCDCSHADG------CHPTTGHCR 558
Query: 236 CKDNVEGAQCRS 247
C G C S
Sbjct: 559 CLPGWSGVHCDS 570
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 61/249 (24%), Positives = 92/249 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C +C G C++ C +Y C C + G + + G C C PG T
Sbjct: 598 GIC-ECAPGFRGTTCQRICSPGFYGHRCSQTCPQC-VHSSGPCH---HITGLCDCLPGFT 652
Query: 83 GDKCDR-CDVNHYDFGEAG-C------------KSCECNPA--GSVKNTPNCDSVKG-QC 125
G C+ C + AG C +SC+C P GS + P + G C
Sbjct: 653 GALCNEVCPSGRFGKNCAGVCTCTNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAHWGPNC 712
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS----- 180
G + + + P ++ +RC Y G +L QC +
Sbjct: 713 IHTCNCHNGAFCSAYDGECKCT--PGWTGLYCTQRCPLGFY--GKDCALICQCQNGADCD 768
Query: 181 --EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ G G C+ +C Y +G C+ C+C N CD + G C C
Sbjct: 769 HISGQCTCRTGFMGRHCEQKCPAGTYGYG---CRQICDC------LNNSTCDHITGTCYC 819
Query: 237 KDNVEGAQC 245
+GA+C
Sbjct: 820 SPGWKGARC 828
>UNIPROTKB|F1MET4 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 GO:GO:0055001 GO:GO:0034109 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654
GO:GO:0051147 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:DAAA02019789 EMBL:DAAA02019790 EMBL:DAAA02019791
EMBL:DAAA02019792 IPI:IPI00742600 UniGene:Bt.64852
Ensembl:ENSBTAT00000000434 NextBio:20877803 ArrayExpress:F1MET4
Uniprot:F1MET4
Length = 1136
Score = 164 (62.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 73/244 (29%), Positives = 102/244 (41%)
Query: 23 GGHCLD-CQGDRDGPNCEK---CRDN--YYQKSGDNFC------TACN--CNPIGSLNLQ 68
G C D C + GP CE+ C++ + +G+ C T C C P G
Sbjct: 218 GAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPPGWLGTVCGQPC-PEGRFGKN 276
Query: 69 CNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGS--VKNTPNCDSVKG-Q 124
C+ E CQC G T D +C + GE C+ EC P G+ V C + G +
Sbjct: 277 CSQE--CQCHNGGTCDAATGQCHCSPGYTGER-CQD-EC-PVGTYGVHCAETCQCINGGK 331
Query: 125 CESAQLSSRGRV-HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EG 182
C S + R ++R P G ++ +R KR P H + L C+ G
Sbjct: 332 CYHVSGSCLCEAGFSGDRCEAR--LCPEG--LYGIRCDKR--CPC-HVDN-TLSCHPMSG 383
Query: 183 RCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
C CKPG +G C+ C Y GEA + C C +N +CDSV G+C C +
Sbjct: 384 ECACKPGWSGLYCNETCSPGFY--GEACQQICSC------QNGADCDSVTGKCICAPGFK 435
Query: 242 GAQC 245
G C
Sbjct: 436 GIDC 439
Score = 161 (61.7 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 71/259 (27%), Positives = 99/259 (38%)
Query: 9 RCFFDKELYNRTGHGG-HCLD-CQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNPI-GS 64
RC G GG +C C GD GP+C +C+ K+G CNPI G+
Sbjct: 117 RCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSRCQC----KNG------ALCNPITGA 166
Query: 65 LNLQCNSEG-RCQ--CKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CD 119
+ G RC+ C+ G G+ C RC + + C C P + + C
Sbjct: 167 CHCAAGFRGWRCEERCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCP 226
Query: 120 SVK-G-QCESAQLSSRGRV-HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL 176
K G QCE G V H V + P + C + G S
Sbjct: 227 PGKHGPQCEQRCPCQNGGVCH---HVTGECSCPPGWLGTVCGQPCPEGRF--GKNCSQEC 281
Query: 177 QCNS-------EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
QC++ G+C C PG TG++C D C V Y G ++C+C G C
Sbjct: 282 QCHNGGTCDAATGQCHCSPGYTGERCQDECPVGTY--GVHCAETCQCINGGK------CY 333
Query: 229 SVKGQCECKDNVEGAQCRS 247
V G C C+ G +C +
Sbjct: 334 HVSGSCLCEAGFSGDRCEA 352
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 61/249 (24%), Positives = 92/249 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C +C G C++ C +Y C C + G + + G C C PG T
Sbjct: 598 GIC-ECAPGFRGTTCQRICSPGFYGHRCSQTCPQC-VHSSGPCH---HITGLCDCLPGFT 652
Query: 83 GDKCDR-CDVNHYDFGEAG-C------------KSCECNPA--GSVKNTPNCDSVKG-QC 125
G C+ C + AG C +SC+C P GS + P + G C
Sbjct: 653 GALCNEVCPSGRFGKNCAGICTCTNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAHWGPNC 712
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS----- 180
G + + + P ++ +RC Y G +L QC +
Sbjct: 713 IHTCNCHNGAFCSAYDGECKCT--PGWTGLYCTQRCPLGFY--GKDCALVCQCQNGADCD 768
Query: 181 --EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ G G C+ +C Y +G C+ C+C N CD + G C C
Sbjct: 769 HISGQCTCRTGFMGKHCEQKCPAGTYGYG---CRQICDC------LNNSTCDHITGTCYC 819
Query: 237 KDNVEGAQC 245
+GA+C
Sbjct: 820 SPGWKGARC 828
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 56/204 (27%), Positives = 73/204 (35%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPA--GSVK 113
C C P G L CN C PG G+ C + C + ++ C C P G
Sbjct: 385 CACKP-GWSGLYCNET----CSPGFYGEACQQICSCQNGADCDSVTGKCICAPGFKGIDC 439
Query: 114 NTPNCDSVKG-QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR-RCKRDTYPLGHG 171
+ P G C S V + + N AG D C T+ G G
Sbjct: 440 SIPCPLGTYGINCSSLCSCKNDAVCSPVDGSCTCN---AGWHGVDCSISCPSGTW--GFG 494
Query: 172 GSLNLQC------NS-EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKN 223
+L QC N+ +G C C PG G+KC+ C Y A + C+C+ A
Sbjct: 495 CNLTCQCLNGGACNTLDGTCTCAPGWRGEKCEFPCQDGTYGLNCA--ERCDCSHADG--- 549
Query: 224 TPNCDSVKGQCECKDNVEGAQCRS 247
C S G C C G C S
Sbjct: 550 ---CHSTTGHCRCLPGWSGVHCDS 570
Score = 116 (45.9 bits), Expect = 0.00098, P = 0.00098
Identities = 68/254 (26%), Positives = 94/254 (37%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C C+ G C E C +Y ++ C+ N G+ C+S G+C C PG
Sbjct: 383 GECA-CKPGWSGLYCNETCSPGFYGEACQQICSCQN----GA---DCDSVTGKCICAPGF 434
Query: 82 TGDKCD-RCDVNHYDFG---------EAGCK----SCECNPAG--SVKNTPNCDS-VKG- 123
G C C + Y +A C SC CN AG V + +C S G
Sbjct: 435 KGIDCSIPCPLGTYGINCSSLCSCKNDAVCSPVDGSCTCN-AGWHGVDCSISCPSGTWGF 493
Query: 124 QCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCK---RD-TYPLGHGGSLNLQ- 177
C + Q + G +T + P W +C+ +D TY L +
Sbjct: 494 GCNLTCQCLNGGACNT---LDGTCTCAPG----WRGEKCEFPCQDGTYGLNCAERCDCSH 546
Query: 178 ---CNSE-GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
C+S G C+C PG +G CD C + G C C KN +C G
Sbjct: 547 ADGCHSTTGHCRCLPGWSGVHCDSVCAEGRW--GPNCSLPCYC------KNGASCSPDDG 598
Query: 233 QCECKDNVEGAQCR 246
CEC G C+
Sbjct: 599 ICECAPGFRGTTCQ 612
>UNIPROTKB|O75095 [details] [associations]
symbol:MEGF6 "Multiple epidermal growth factor-like domains
protein 6" species:9606 "Homo sapiens" [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS00010 EMBL:AL512413
EMBL:AB011539 EMBL:AB231860 EMBL:AL513320 IPI:IPI00306850
IPI:IPI00788209 RefSeq:NP_001400.3 UniGene:Hs.593645
ProteinModelPortal:O75095 SMR:O75095 IntAct:O75095
MINT:MINT-2797336 STRING:O75095 PhosphoSite:O75095 PaxDb:O75095
PRIDE:O75095 DNASU:1953 Ensembl:ENST00000294599
Ensembl:ENST00000356575 GeneID:1953 KEGG:hsa:1953 UCSC:uc001akk.3
UCSC:uc001akl.3 CTD:1953 GeneCards:GC01M003396 H-InvDB:HIX0000066
HGNC:HGNC:3232 HPA:HPA052129 MIM:604266 neXtProt:NX_O75095
PharmGKB:PA27665 HOGENOM:HOG000097840 HOVERGEN:HBG079790
OMA:QGAACDP GenomeRNAi:1953 NextBio:7915 Bgee:O75095
CleanEx:HS_MEGF6 Genevestigator:O75095 GermOnline:ENSG00000162591
Uniprot:O75095
Length = 1541
Score = 165 (63.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 66/244 (27%), Positives = 92/244 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACN---CNPI-GSLNLQCNSEGR-CQ- 76
G CL C R G CE+ C N + ++ C+ N C+ GS + GR C+
Sbjct: 1275 GTCL-CPPGRAGVRCERGCPQNRFGVGCEHTCSCRNGGLCHASNGSCSCGLGWTGRHCEL 1333
Query: 77 -CKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPA--GSVKNTPNCDSVKGQ-CESAQLS 131
C PG G C C ++ E +C C P G P G C+
Sbjct: 1334 ACPPGRYGAACHLECSCHNNSTCEPATGTCRCGPGFYGQACEHPCPPGFHGAGCQGLCWC 1393
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR-------- 183
G + S + PAG + C+R P G + +C+ +G
Sbjct: 1394 QHGAPCDPI---SGRCLCPAG---FHGHFCERGCEPGSFGEGCHQRCDCDGGAPCDPVTG 1447
Query: 184 -CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
C C PG +G C+ D FG + C+C G+ +CD V GQC C D G
Sbjct: 1448 LCLCPPGRSGATCN-LDCRRGQFGPSCTLHCDCG-GGA-----DCDPVSGQCHCVDGYMG 1500
Query: 243 AQCR 246
CR
Sbjct: 1501 PTCR 1504
Score = 155 (59.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 72/250 (28%), Positives = 96/250 (38%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C G +C++ D + G + CNC+ G + C++ G C C+ G
Sbjct: 843 GHC-SCAPGWTGFSCQRACDTGHW--GPDCSHPCNCSA-G--HGSCDAISGLCLCEAGYV 896
Query: 83 GDKCDR-CDVNHYDFGEAGCKS-CECNPAGS---VKNTPNCDSV-KGQ-CESA------Q 129
G +C++ C H FG GC+ C+C + V C + +G CE A
Sbjct: 897 GPRCEQQCPQGH--FGP-GCEQRCQCQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFG 953
Query: 130 LSSRGRVH-TELRVQSRKNFD---PAGNR-IWDLRRCKRDTYPLGHGGSLNLQC-NS--- 180
L R + T N PAG R C TY GH S C N
Sbjct: 954 LDCRSACNCTAGAACDAVNGSCLCPAGRRGPRCAETCPAHTY--GHNCSQACACFNGASC 1011
Query: 181 ---EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCE 235
G+C C PG G C C Y G+ C+ SC C G+ CD V G C
Sbjct: 1012 DPVHGQCHCAPGWMGPSCLQACPAGLY--GD-NCRHSCLCQNGGT------CDPVSGHCA 1062
Query: 236 CKDNVEGAQC 245
C + G C
Sbjct: 1063 CPEGWAGLAC 1072
Score = 148 (57.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 71/264 (26%), Positives = 91/264 (34%)
Query: 1 CNCNGFSNRCFFDKELYN-RTG-HGGHCLD-CQGDRDGPNCEKCRDNYYQKSGDNFCTAC 57
C C G + C + G HG C C R GP CE+ S D AC
Sbjct: 1175 CQCPGENPACHPATGTCSCAAGYHGPSCQQRCPPGRYGPGCEQLCGCLNGGSCDAATGAC 1234
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPA-GSVKNT 115
C P G L CN C G G C C + +C C P V+
Sbjct: 1235 RC-PTGFLGTDCN----LTCPQGRFGPNCTHVCGCGQGAACDPVTGTCLCPPGRAGVRCE 1289
Query: 116 PNCDSVK-GQ-CE-SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
C + G CE + + G H N + W R C+ P +G
Sbjct: 1290 RGCPQNRFGVGCEHTCSCRNGGLCHAS-------NGSCSCGLGWTGRHCELACPPGRYGA 1342
Query: 173 SLNLQC----NSE-----GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSV 221
+ +L+C NS G C+C PG G C+ C F AGC+ C C
Sbjct: 1343 ACHLECSCHNNSTCEPATGTCRCGPGFYGQACEHPCPPG---FHGAGCQGLCWCQ----- 1394
Query: 222 KNTPNCDSVKGQCECKDNVEGAQC 245
P CD + G+C C G C
Sbjct: 1395 HGAP-CDPISGRCLCPAGFHGHFC 1417
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 68/248 (27%), Positives = 92/248 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
G CL C G C+ C +Y G + T C+C G C+ + G C C PG
Sbjct: 800 GACL-CLPGFVGSRCQDVCPAGWY---GPSCQTRCSCANDG----HCHPATGHCSCAPGW 851
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPA-GS---VKNTPNCDS--VKGQCESAQLSSRG 134
TG C R CD H+ G C C+ GS + C++ V +CE
Sbjct: 852 TGFSCQRACDTGHW--GPDCSHPCNCSAGHGSCDAISGLCLCEAGYVGPRCEQQCPQGHF 909
Query: 135 RVHTELRVQSRKNF--D--------PAGNR-IWDLRRCKRDTYPLGHGGSLNLQ----CN 179
E R Q + D PAG R + C + L + N C+
Sbjct: 910 GPGCEQRCQCQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFGLDCRSACNCTAGAACD 969
Query: 180 S-EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+ G C C G G +C + C + Y G ++C C N +CD V GQC C
Sbjct: 970 AVNGSCLCPAGRRGPRCAETCPAHTY--GHNCSQACACF------NGASCDPVHGQCHCA 1021
Query: 238 DNVEGAQC 245
G C
Sbjct: 1022 PGWMGPSC 1029
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 71/250 (28%), Positives = 90/250 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQ---KSGDNFCTA-CNCNPI-GSLNLQCNSEG-RCQ 76
G C C G CE C ++ +S N CTA C+ + GS G RC
Sbjct: 930 GACT-CPAGWRGTFCEHACPAGFFGLDCRSACN-CTAGAACDAVNGSCLCPAGRRGPRCA 987
Query: 77 --CKPGVTGDKCDR-CDVNHYDFGEAGCK----SCECNPAGSVKNTPNCDSVKGQCESAQ 129
C G C + C F A C C C P P+C C +
Sbjct: 988 ETCPAHTYGHNCSQACAC----FNGASCDPVHGQCHCAPGWM---GPSCLQA---CPAGL 1037
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRI-----WDLRRCKRDTYP----LG--H-GGSLNLQ 177
R H+ L Q+ DP W C+++ P G H GG LN
Sbjct: 1038 YGDNCR-HSCL-CQNGGTCDPVSGHCACPEGWAGLACEKECLPRDVRAGCRHSGGCLNGG 1095
Query: 178 -CNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C+ GRC C G TGDKC + + FGEA + C C P + C V G C
Sbjct: 1096 LCDPHTGRCLCPAGWTGDKCQSPCLRGW-FGEACAQRCSCPPGAA------CHHVTGACR 1148
Query: 236 CKDNVEGAQC 245
C G+ C
Sbjct: 1149 CPPGFTGSGC 1158
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 60/243 (24%), Positives = 86/243 (35%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACN---CNPI-GSLNLQCNSEG-RC-- 75
G CL C R GP C E C + Y + C N C+P+ G + G C
Sbjct: 973 GSCL-CPAGRRGPRCAETCPAHTYGHNCSQACACFNGASCDPVHGQCHCAPGWMGPSCLQ 1031
Query: 76 QCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C G+ GD C C + + C C P G + + + S G
Sbjct: 1032 ACPAGLYGDNCRHSCLCQNGGTCDPVSGHCAC-PEGWAGLACEKECLPRDVRAGCRHSGG 1090
Query: 135 RVHTEL-RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE---------GRC 184
++ L + + PAG W +C+ G + +C+ G C
Sbjct: 1091 CLNGGLCDPHTGRCLCPAG---WTGDKCQSPCLRGWFGEACAQRCSCPPGAACHHVTGAC 1147
Query: 185 QCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
+C PG TG C++ C FGE + C+C P P C G C C G
Sbjct: 1148 RCPPGFTGSGCEQACPPG--SFGEDCAQMCQC-PG----ENPACHPATGTCSCAAGYHGP 1200
Query: 244 QCR 246
C+
Sbjct: 1201 SCQ 1203
Score = 119 (46.9 bits), Expect = 0.00064, P = 0.00064
Identities = 74/275 (26%), Positives = 103/275 (37%)
Query: 1 CNC--NGFSNR----CFFDKELYNRTGHGGHCLDCQGDRDGPNC-EKCRD-NYYQKSGDN 52
CNC G +R C D LY R H L C GP C E+C+ + +S D
Sbjct: 611 CNCANRGRCHRLYGACLCDPGLYGRFCH----LTCPPWAFGPGCSEECQCVQPHTQSCDK 666
Query: 53 FCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR---CDVN-HYDF--GEAG--C--- 101
+C+C G +C +E C+ G G C + C V D GE G C
Sbjct: 667 RDGSCSCKA-GFRGERCQAE----CELGYFGPGCWQACTCPVGVACDSVSGECGKRCPAG 721
Query: 102 ---KSC--ECNPAGS--VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
+ C EC P G+ V + +C C ++ + R + + P G
Sbjct: 722 FQGEDCGQEC-PVGTFGVNCSSSCSCGGAPCHG--VTGQCRCPPGRTGEDCEADCPEGR- 777
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKS 212
W L C+ H +C+ E G C C PG G +C D C Y G + C++
Sbjct: 778 -WGLG-CQEICPACQHAA----RCDPETGACLCLPGFVGSRCQDVCPAGWY--GPS-CQT 828
Query: 213 -CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C C N +C G C C G C+
Sbjct: 829 RCSC------ANDGHCHPATGHCSCAPGWTGFSCQ 857
Score = 97 (39.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 31/94 (32%), Positives = 38/94 (40%)
Query: 161 CKRDTYPLGHGGSLNLQ-CNSEGRC-------QCKPGVTGDKCDR-CDVNHYDFGEAGCK 211
C D++ GH SL C + G C C G TG C+ C + FG+
Sbjct: 511 CLDDSF--GHDCSLTCDDCRNGGTCLLGLDGCDCPEGWTGLICNETCPPD--TFGKNCSF 566
Query: 212 SCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
SC C G+ CDSV G C C V G C
Sbjct: 567 SCSCQNGGT------CDSVTGACRCPPGVSGTNC 594
Score = 78 (32.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 27/88 (30%), Positives = 38/88 (43%)
Query: 1 CNCN-GFSN-RCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACN 58
C+C GF RC +D + RT +GG C CE C+ + + C A N
Sbjct: 147 CHCPPGFQGPRCQYDVDEC-RTHNGGCQHRCVNTPGSYLCE-CKPGFRLHTDSRTCLAIN 204
Query: 59 CNPIGSLNLQ--CN----SEGRCQCKPG 80
+G+ Q C + RCQC+PG
Sbjct: 205 SCALGNGGCQHHCVQLTITRHRCQCRPG 232
>MGI|MGI:1858430 [details] [associations]
symbol:Scarf2 "scavenger receptor class F, member 2"
species:10090 "Mus musculus" [GO:0005044 "scavenger receptor
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007157
"heterophilic cell-cell adhesion" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
MGI:MGI:1858430 GO:GO:0016021 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007157 InterPro:IPR009030 SUPFAM:SSF57184
GO:GO:0005044 CTD:91179 eggNOG:NOG284054 HOGENOM:HOG000015093
HOVERGEN:HBG023166 OMA:NVCRAPG EMBL:AF522197 IPI:IPI00177200
RefSeq:NP_722485.1 UniGene:Mm.194950 ProteinModelPortal:P59222
SMR:P59222 STRING:P59222 PhosphoSite:P59222 PaxDb:P59222
PRIDE:P59222 Ensembl:ENSMUST00000012161 GeneID:224024
KEGG:mmu:224024 InParanoid:P59222 OrthoDB:EOG4QJRMT ChiTaRS:SCARF2
NextBio:377021 Bgee:P59222 CleanEx:MM_SCARF2 Genevestigator:P59222
GermOnline:ENSMUSG00000012017 Uniprot:P59222
Length = 833
Score = 162 (62.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 68/224 (30%), Positives = 91/224 (40%)
Query: 41 CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDR-CDVNH----- 93
C ++ +S +N C ACN +P C + GRCQC+ + G +CDR C +H
Sbjct: 194 CHVGWWGRSCNNQC-ACNSSP-------CEQQSGRCQCRERMFGARCDRYCQCSHGRCHP 245
Query: 94 YDFGEAGC------KSC-ECNPAGSVKNTPNCDSVKGQCESAQLSS--RGRVHT-ELRVQ 143
D G C K C E PAG P C GQC+ Q + GR T E
Sbjct: 246 VD-GTCACDPGYRGKYCREPCPAGFYG--PGCRRRCGQCKGQQPCTVVEGRCLTCEPGWN 302
Query: 144 SRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCD-RCDVN 201
K P + C P G + N + G+C C G GD+C+ +C
Sbjct: 303 GTKCDQPCATGFYG-EGCGHRCPPCRDGHACN---HVTGKCTHCNAGWIGDRCETKCSNG 358
Query: 202 HYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y GE C + C+ GS +CD G+C C V G C
Sbjct: 359 TY--GE-DC-AFVCSDCGS----GHCDFQSGRCLCSPGVHGPHC 394
Score = 142 (55.0 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 72/245 (29%), Positives = 95/245 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNY---YQKSGDNFCTACNCNPIGSLNLQCNSEGRC---- 75
G C C R G CE C+ + + +SG AC C P G QC S C
Sbjct: 131 GQCT-CHARRWGARCEHACQCQHGTCHPRSG-----ACRCEP-GWWGAQCASACYCSATS 183
Query: 76 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC---DSVKG-QCESAQLS 131
+C P TG C C V + G + C CN + + + C + + G +C+
Sbjct: 184 RCDPQ-TG-AC-LCHVGWW--GRSCNNQCACNSSPCEQQSGRCQCRERMFGARCDRYCQC 238
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG---HGGSLNLQ--CNS-EGRC- 184
S GR H V DP + C Y G G Q C EGRC
Sbjct: 239 SHGRCHP---VDGTCACDPGYRGKYCREPCPAGFYGPGCRRRCGQCKGQQPCTVVEGRCL 295
Query: 185 QCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEG 242
C+PG G KCD+ C Y GE GC C P ++ C+ V G+C C G
Sbjct: 296 TCEPGWNGTKCDQPCATGFY--GE-GCGH-RCPPC---RDGHACNHVTGKCTHCNAGWIG 348
Query: 243 AQCRS 247
+C +
Sbjct: 349 DRCET 353
Score = 99 (39.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 28/83 (33%), Positives = 36/83 (43%)
Query: 46 YQKSGDNFCTA-CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS 103
+++ GD A C N S N C G C+C+ G G CD +C F CK
Sbjct: 60 WRQLGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCP---RQFWGPDCKE 116
Query: 104 -CECNPAGSVKNTPNCDSVKGQC 125
C C+P G C+ V GQC
Sbjct: 117 RCSCHPHGQ------CEDVTGQC 133
Score = 65 (27.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 22/81 (27%), Positives = 27/81 (33%)
Query: 177 QCNS-EGRCQCKPGVTGDKCDR-CDVNHYD-FGEAGCKSCE-------CNPAGSVKNTPN 226
QC G+C C G +C+ C H +G CE C A T
Sbjct: 125 QCEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASACYCSATSR 184
Query: 227 CDSVKGQCECKDNVEGAQCRS 247
CD G C C G C +
Sbjct: 185 CDPQTGACLCHVGWWGRSCNN 205
>UNIPROTKB|Q96KG7 [details] [associations]
symbol:MEGF10 "Multiple epidermal growth factor-like
domains protein 10" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0016323 "basolateral plasma membrane" evidence=IEA] [GO:0048641
"regulation of skeletal muscle tissue development" evidence=IMP]
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IDA] [GO:0051147 "regulation of muscle
cell differentiation" evidence=IMP] [GO:0014816 "satellite cell
differentiation" evidence=IMP] [GO:0055001 "muscle cell
development" evidence=IMP] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
EMBL:CH471062 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GO:GO:0043654 HSSP:P01132 GO:GO:0051147 EMBL:AB058676
EMBL:CR749437 EMBL:BC020198 EMBL:BC152478 IPI:IPI00064607
IPI:IPI00873983 RefSeq:NP_001243474.1 RefSeq:NP_115822.1
UniGene:Hs.438709 ProteinModelPortal:Q96KG7 SMR:Q96KG7
IntAct:Q96KG7 STRING:Q96KG7 PhosphoSite:Q96KG7 DMDM:74716908
PaxDb:Q96KG7 PRIDE:Q96KG7 Ensembl:ENST00000274473
Ensembl:ENST00000418761 Ensembl:ENST00000503335
Ensembl:ENST00000508365 GeneID:84466 KEGG:hsa:84466 UCSC:uc003kuh.4
UCSC:uc010jdc.1 CTD:84466 GeneCards:GC05P126654 HGNC:HGNC:29634
HPA:HPA026876 MIM:612453 MIM:614399 neXtProt:NX_Q96KG7
Orphanet:98920 PharmGKB:PA144596410 HOVERGEN:HBG108333
InParanoid:Q96KG7 OMA:FGCNLTC PhylomeDB:Q96KG7 GenomeRNAi:84466
NextBio:74274 Bgee:Q96KG7 CleanEx:HS_MEGF10 Genevestigator:Q96KG7
GO:GO:0014719 GO:GO:0014841 Uniprot:Q96KG7
Length = 1140
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 73/261 (27%), Positives = 102/261 (39%)
Query: 9 RCFFDKELYNRTGHGG-HCLD-CQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPI-GS 64
RC G GG +C C GD GP+C +C+ K+G CNPI G+
Sbjct: 117 RCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCTSRCQC----KNG------ALCNPITGA 166
Query: 65 LNLQCNSEG-RCQ--CKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CD 119
+ G RC+ C+ G G+ C RC + + C C P + + C
Sbjct: 167 CHCAAGFRGWRCEDRCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCP 226
Query: 120 SVK-G-QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG---SL 174
K G QCE G V + + P+G W C + P G G S
Sbjct: 227 PGKHGPQCEQRCPCQNGGVCHHVTGECSC---PSG---WMGTVCGQPC-PEGRFGKNCSQ 279
Query: 175 NLQCNS-------EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
QC++ G+C C PG TG++C D C V Y G ++C+C G
Sbjct: 280 ECQCHNGGTCDAATGQCHCSPGYTGERCQDECPVGTY--GVLCAETCQCVNGGK------ 331
Query: 227 CDSVKGQCECKDNVEGAQCRS 247
C V G C C+ G +C +
Sbjct: 332 CYHVSGACLCEAGFAGERCEA 352
Score = 162 (62.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 74/246 (30%), Positives = 102/246 (41%)
Query: 23 GGHCLD-CQGDRDGPNCEK---CRDN--YYQKSGDNFC------TACN--CNPIGSLNLQ 68
G C D C + GP CE+ C++ + +G+ C T C C P G
Sbjct: 218 GAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPSGWMGTVCGQPC-PEGRFGKN 276
Query: 69 CNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGS--VKNTPNCDSVKG-Q 124
C+ E CQC G T D +C + GE C+ EC P G+ V C V G +
Sbjct: 277 CSQE--CQCHNGGTCDAATGQCHCSPGYTGER-CQD-EC-PVGTYGVLCAETCQCVNGGK 331
Query: 125 C---ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS- 180
C A L G R ++R P G ++ ++ KR L + S C+
Sbjct: 332 CYHVSGACLCEAGFAGE--RCEAR--LCPEG--LYGIKCDKRCPCHLENTHS----CHPM 381
Query: 181 EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDN 239
G C CKPG +G C+ C Y GEA + C C +N +CDSV G+C C
Sbjct: 382 SGECACKPGWSGLYCNETCSPGFY--GEACQQICSC------QNGADCDSVTGKCTCAPG 433
Query: 240 VEGAQC 245
+G C
Sbjct: 434 FKGIDC 439
Score = 146 (56.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 63/249 (25%), Positives = 90/249 (36%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C C G C + C + + G N C C+ G+ + + G+C C PG T
Sbjct: 251 GEC-SCPSGWMGTVCGQPCPEGRF---GKNCSQECQCHNGGTCDA---ATGQCHCSPGYT 303
Query: 83 GDKC-DRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDS-VKGQ-CESAQLSSRGR--V 136
G++C D C V Y A C+ V C++ G+ CE A+L G +
Sbjct: 304 GERCQDECPVGTYGVLCAETCQCVNGGKCYHVSGACLCEAGFAGERCE-ARLCPEGLYGI 362
Query: 137 HTELR----VQSRKNFDPAGNRI-----WDLRRCKRDTYPLGHGGSLNLQCNSE------ 181
+ R +++ + P W C P +G + C+ +
Sbjct: 363 KCDKRCPCHLENTHSCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCD 422
Query: 182 ---GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCEC 236
G+C C PG G C C + Y C S C C KN C V G C C
Sbjct: 423 SVTGKCTCAPGFKGIDCSTPCPLGTYGIN---CSSRCGC------KNDAVCSPVDGSCTC 473
Query: 237 KDNVEGAQC 245
K G C
Sbjct: 474 KAGWHGVDC 482
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 58/232 (25%), Positives = 91/232 (39%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGE 98
+C +Y+ SG+ C +C ++ +C + CQC+PG G C CD +H+ G
Sbjct: 93 QCCPGFYE-SGE-MCVP-HCAD-KCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHW--GP 146
Query: 99 AGCKSCECNPAGSVKN--TPNCDSVKG----QCES-AQLSSRGR-VHTELRVQSRKNFDP 150
C+C G++ N T C G +CE + + G H + Q+ D
Sbjct: 147 HCTSRCQCKN-GALCNPITGACHCAAGFRGWRCEDRCEQGTYGNDCHQRCQCQNGATCDH 205
Query: 151 AGNRI-----WDLRRCKRDTYPLG-HGGSLNLQCNSE---------GRCQCKPGVTGDKC 195
+ C+ D P G HG +C + G C C G G C
Sbjct: 206 VTGECRCPPGYTGAFCE-DLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPSGWMGTVC 264
Query: 196 DR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ C FG+ + C+C+ G+ CD+ GQC C G +C+
Sbjct: 265 GQPCPEGR--FGKNCSQECQCHNGGT------CDAATGQCHCSPGYTGERCQ 308
Score = 139 (54.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 61/249 (24%), Positives = 92/249 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C +C G C++ C +Y C C + G + + G C C PG T
Sbjct: 598 GIC-ECAPGFRGTTCQRICSPGFYGHRCSQTCPQC-VHSSGPCH---HITGLCDCLPGFT 652
Query: 83 GDKCDR-CDVNHYDFGEAG-C------------KSCECNPA--GSVKNTPNCDSVKG-QC 125
G C+ C + AG C +SC+C P GS + P + G C
Sbjct: 653 GALCNEVCPSGRFGKNCAGICTCTNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAHWGPNC 712
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS----- 180
G + + + P ++ +RC Y G +L QC +
Sbjct: 713 IHTCNCHNGAFCSAYDGECKCT--PGWTGLYCTQRCPLGFY--GKDCALICQCQNGADCD 768
Query: 181 --EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ G G C+ +C Y +G C+ C+C N CD + G C C
Sbjct: 769 HISGQCTCRTGFMGRHCEQKCPSGTYGYG---CRQICDC------LNNSTCDHITGTCYC 819
Query: 237 KDNVEGAQC 245
+GA+C
Sbjct: 820 SPGWKGARC 828
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 54/203 (26%), Positives = 72/203 (35%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPA--GSVK 113
C C P G L CN C PG G+ C + C + ++ C C P G
Sbjct: 385 CACKP-GWSGLYCNET----CSPGFYGEACQQICSCQNGADCDSVTGKCTCAPGFKGIDC 439
Query: 114 NTPNCDSVKG-QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG 172
+TP G C S V + V + + RC T+ G G
Sbjct: 440 STPCPLGTYGINCSSRCGCKNDAVCSP--VDGSCTCKAGWHGVDCSIRCPSGTW--GFGC 495
Query: 173 SLNLQC------NS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNT 224
+L QC N+ +G C C PG G+KC+ C Y A + C+C+ A
Sbjct: 496 NLTCQCLNGGACNTLDGTCTCAPGWRGEKCELPCQDGTYGLNCA--ERCDCSHADG---- 549
Query: 225 PNCDSVKGQCECKDNVEGAQCRS 247
C G C C G C S
Sbjct: 550 --CHPTTGHCRCLPGWSGVHCDS 570
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 62/246 (25%), Positives = 88/246 (35%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C C+ G C E C +Y ++ C+ N G+ C+S G+C C PG
Sbjct: 383 GECA-CKPGWSGLYCNETCSPGFYGEACQQICSCQN----GA---DCDSVTGKCTCAPGF 434
Query: 82 TGDKCDR-CDVNHYDFG---EAGCKS-CECNPA-GSVKNTPNCDSVKG--QCESAQLSSR 133
G C C + Y GCK+ C+P GS V +C S
Sbjct: 435 KGIDCSTPCPLGTYGINCSSRCGCKNDAVCSPVDGSCTCKAGWHGVDCSIRCPSGTWGFG 494
Query: 134 GRVHTE-LRVQSRKNFDPAGNRI--WDLRRCK---RD-TYPLGHGGSLNLQ----CN-SE 181
+ + L + D W +C+ +D TY L + C+ +
Sbjct: 495 CNLTCQCLNGGACNTLDGTCTCAPGWRGEKCELPCQDGTYGLNCAERCDCSHADGCHPTT 554
Query: 182 GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C+C PG +G CD C + G C C KN +C G CEC
Sbjct: 555 GHCRCLPGWSGVHCDSVCAEGRW--GPNCSLPCYC------KNGASCSPDDGICECAPGF 606
Query: 241 EGAQCR 246
G C+
Sbjct: 607 RGTTCQ 612
>ZFIN|ZDB-GENE-070122-3 [details] [associations]
symbol:celsr3 "cadherin, EGF LAG seven-pass G-type
receptor 3" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IMP] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 SMART:SM00303 ZFIN:ZDB-GENE-070122-3 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007214 GO:GO:0007218
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 EMBL:CR847503
EMBL:CR382331 EMBL:CT027605 IPI:IPI00773917
Ensembl:ENSDART00000078334 Bgee:F1R8J2 Uniprot:F1R8J2
Length = 2916
Score = 166 (63.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G DC ++ +C C++ +Y++ G + C C+C P+GS + C+ E G+CQC+PGV
Sbjct: 1720 GFDTDC--NKTTGHCH-CKEFHYRRRGSDICLPCDCYPVGSFSRSCDPESGQCQCRPGVI 1776
Query: 83 GDKCDRCDVNHYDFGEAGCK 102
G +C+ CD + + GC+
Sbjct: 1777 GRQCNMCDNPFAEVTQTGCE 1796
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 49/167 (29%), Positives = 76/167 (45%)
Query: 50 GDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT-GDKCDRCDVNHY-DFGEAGCKS-CEC 106
G + AC NP C ++ +C KP + G CD C+ +HY + + + C
Sbjct: 1651 GKSCMDACQLNP-------CENQAKCHRKPSSSHGYICD-CEDSHYGQYCQHRIEQQCPR 1702
Query: 107 NPAGSVKNTP-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
GS P +CD+ KG ++ G H + R+ G+ I C D
Sbjct: 1703 GWWGSPTCGPCHCDASKGFDTDCNKTT-GHCHCK-EFHYRRR----GSDI--CLPC--DC 1752
Query: 166 YPLGHGGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 211
YP+G S + C+ E G+CQC+PGV G +C+ CD + + GC+
Sbjct: 1753 YPVG---SFSRSCDPESGQCQCRPGVIGRQCNMCDNPFAEVTQTGCE 1796
>RGD|621190 [details] [associations]
symbol:Megf8 "multiple EGF-like-domains 8" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0061371 "determination of heart
left/right asymmetry" evidence=ISO] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0060287 "epithelial cilium movement
involved in determination of left/right asymmetry" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002165
InterPro:IPR015915 InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621190 GO:GO:0016021 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 eggNOG:NOG304142 HOGENOM:HOG000113554
HOVERGEN:HBG108128 OrthoDB:EOG4JHCDR EMBL:AABR03001918
EMBL:AABR03001941 EMBL:AABR03004237 EMBL:AB011534 IPI:IPI00766905
UniGene:Rn.21378 ProteinModelPortal:Q9QYP0 IntAct:Q9QYP0
STRING:Q9QYP0 PhosphoSite:Q9QYP0 PRIDE:Q9QYP0
Ensembl:ENSRNOT00000027831 UCSC:RGD:621190 InParanoid:Q9QYP0
Genevestigator:Q9QYP0 Uniprot:Q9QYP0
Length = 2788
Score = 143 (55.4 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 160 RCKRDTYPLGHGGSLNLQCNSEGR--C-QCKPGVTGDKCDRCDVNHYD--FGEAGCKSCE 214
RC RD G + + C G C +C+ G+ C+RC + G GC+ C+
Sbjct: 1158 RCSRDC-----GCNFHSHCRRRGPGYCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQ 1212
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CN G + +CD++ G C C+D+ EGA C+
Sbjct: 1213 CNGHGDPRRG-HCDNLSGLCFCQDHTEGAHCQ 1243
Score = 130 (50.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 38/119 (31%), Positives = 48/119 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN F + C R G G +C +CQ G +CE+CR + +G C C C
Sbjct: 1163 CGCN-FHSHC-------RRRGPG-YCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQC 1213
Query: 60 NPIGSLNL-QC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC--ECNPAGSVKN 114
N G C N G C C+ G C C +Y AG SC EC + N
Sbjct: 1214 NGHGDPRRGHCDNLSGLCFCQDHTEGAHCQICSPGYYGDPRAG-GSCFRECGGRALLTN 1271
Score = 120 (47.3 bits), Expect = 0.00094, P = 0.00094
Identities = 62/249 (24%), Positives = 92/249 (36%)
Query: 22 HGGH-CLDCQGDRDGPN---CEKCRDNYYQKSGDNFCTACNCNPI---GSLNLQCNSEGR 74
+G H C + Q D P+ C C+ Y DN C P+ G +N C
Sbjct: 2127 NGHHDCNETQNCHDQPHGYECS-CKTGYTM---DNVTGVCR--PVCAQGCVNGSCVEPDH 2180
Query: 75 CQCKPGVTGDKCD-RCDVN-HYDFGEAG----CKSCECNPAGSVKNTPNCDSV------- 121
C+C G G C C N H + G C C + GS + C +
Sbjct: 2181 CRCHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNHTKGS--HCEQCLPLFVGSALG 2238
Query: 122 KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRI--WDLRRCKRDTYPLGHGGSLNLQCN 179
G C RG H + SRK + A + L + + + + G S
Sbjct: 2239 GGTCRPCHAFCRGNSHVCV---SRKELEMARREPEKYSLDPEEIEAW-VAEGPS-----E 2289
Query: 180 SEGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECK 237
E C C+ GD+C+ C ++ Y + C C+CN G + C+ G C C+
Sbjct: 2290 DEAVCVNCQNNSYGDRCESC-LHGYFLLDGKCTKCQCN--G---HADTCNEQDGTGCPCQ 2343
Query: 238 DNVEGAQCR 246
+N E C+
Sbjct: 2344 NNTETGVCQ 2352
Score = 76 (31.8 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 23/71 (32%), Positives = 27/71 (38%)
Query: 43 DNYYQKSGDNFCTACNCNPIGSLNL-QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGC 101
D Y G N + P G N QC S G C C+PG G C + + Y C
Sbjct: 125 DANYNLLGFNASFRFSLCPGGCQNHGQCKSPGVCVCEPGWGGPDCGLQECSAYCGSHGTC 184
Query: 102 KS----CECNP 108
S C C P
Sbjct: 185 ASTLGPCRCEP 195
Score = 57 (25.1 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 54 CTACNCNPI-GSLNLQCNSEGRCQCKPGVTGDKCD 87
C C+ GS ++ G C+C+PG G CD
Sbjct: 169 CGLQECSAYCGSHGTCASTLGPCRCEPGFLGRACD 203
Score = 44 (20.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 23/84 (27%), Positives = 28/84 (33%)
Query: 172 GSLNLQCNSEGRC----QCKP--GVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKN 223
GS G C +C P G G RC G AG C+ C P +
Sbjct: 1403 GSARCGSGGPGSCPVPQECVPQDGAAGAGLCRCPQ-----GWAGPHCRMALC-PENCNAH 1456
Query: 224 TPN--CDSVKGQCECKDNVEGAQC 245
T C+ G C C + G C
Sbjct: 1457 TGAGICNQSLGVCICAEGFGGPDC 1480
Score = 37 (18.1 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 116 PNCDSVKGQCESA 128
P C +G C+SA
Sbjct: 575 PECSWCQGACQSA 587
Score = 36 (17.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQC 77
C AC +P + N +G C
Sbjct: 907 CHACTQDPFCEWHQSTNRKGDAAC 930
Score = 36 (17.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 6/15 (40%), Positives = 6/15 (40%)
Query: 232 GQCECKDNVEGAQCR 246
G C C G CR
Sbjct: 1431 GLCRCPQGWAGPHCR 1445
>UNIPROTKB|Q7Z7M0 [details] [associations]
symbol:MEGF8 "Multiple epidermal growth factor-like domains
protein 8" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005198 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
InterPro:IPR011043 SUPFAM:SSF50965 EMBL:AB011541 EMBL:AC011497
EMBL:AC024078 EMBL:BC153880 EMBL:AY280362 IPI:IPI00027310
IPI:IPI00607580 PIR:T00209 RefSeq:NP_001258867.1 RefSeq:NP_001401.2
UniGene:Hs.132483 ProteinModelPortal:Q7Z7M0 SMR:Q7Z7M0
IntAct:Q7Z7M0 MINT:MINT-2808456 STRING:Q7Z7M0 PhosphoSite:Q7Z7M0
DMDM:218511690 PaxDb:Q7Z7M0 PRIDE:Q7Z7M0 Ensembl:ENST00000251268
Ensembl:ENST00000334370 GeneID:1954 KEGG:hsa:1954 UCSC:uc002otl.4
UCSC:uc002otm.4 CTD:1954 GeneCards:GC19P042829 HGNC:HGNC:3233
HPA:HPA049248 MIM:604267 neXtProt:NX_Q7Z7M0 PharmGKB:PA27666
eggNOG:NOG304142 HOGENOM:HOG000113554 HOVERGEN:HBG108128
OMA:GHSMVFH ChiTaRS:MEGF8 GenomeRNAi:1954 NextBio:7919
ArrayExpress:Q7Z7M0 Bgee:Q7Z7M0 CleanEx:HS_MEGF8
Genevestigator:Q7Z7M0 GermOnline:ENSG00000105429 Uniprot:Q7Z7M0
Length = 2845
Score = 146 (56.5 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 31/92 (33%), Positives = 46/92 (50%)
Query: 160 RCKRDTYPLGHGGSLNLQCNSEGR--C-QCKPGVTGDKCDRCDVNHYD--FGEAGCKSCE 214
RC RD G S + C G C +C+ G+ C+RC + G GC+ C+
Sbjct: 1158 RCSRDC-----GCSFHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATGSRGCRPCQ 1212
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CN G + +CD++ G C C+D+ EGA C+
Sbjct: 1213 CNGHGDPRRG-HCDNLSGLCFCQDHTEGAHCQ 1243
Score = 69 (29.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 15/45 (33%), Positives = 18/45 (40%)
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS----CECNP 108
QC G C C+PG G C + + Y C S C C P
Sbjct: 151 QCQPPGVCACEPGWGGPDCGLQECSAYCGSHGTCASPLGPCRCEP 195
Score = 56 (24.8 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C C+ + C S G C+C+PG G CD
Sbjct: 169 CGLQECSAYCGSHGTCASPLGPCRCEPGFLGRACD 203
>UNIPROTKB|G5E6L9 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 EMBL:DAAA02047467
Ensembl:ENSBTAT00000063836 Uniprot:G5E6L9
Length = 446
Score = 157 (60.3 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 45/158 (28%), Positives = 71/158 (44%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKC----RDNYYQKSGDNF--- 53
C C+G + RC +R C C+ GP CE C RD ++ +
Sbjct: 177 CQCHGHAARC----AARDRPPR---CR-CRHHTTGPGCESCQPSHRDWPWRPATPRHPHP 228
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCE--CNPAG 110
C C C+PIG+ CN + G+C CK GVTG C+RC Y + C+
Sbjct: 229 CLPCQCHPIGATGGACNQTNGQCSCKLGVTGLTCNRCGPG-YQQSRSPRMPCQRILEATT 287
Query: 111 SVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
++ TP+ S QC++ +S R+H L+ ++++
Sbjct: 288 TLATTPHAYSSDPQCQNYCNTSDTRIHMSLQRYCQQDY 325
Score = 114 (45.2 bits), Expect = 0.00049, P = 0.00049
Identities = 23/71 (32%), Positives = 32/71 (45%)
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFG--------EAGCKSCECNPAGSVKNTPNCDSVKGQC 234
RC+C+ TG C+ C +H D+ C C+C+P G+ C+ GQC
Sbjct: 194 RCRCRHHTTGPGCESCQPSHRDWPWRPATPRHPHPCLPCQCHPIGATGGA--CNQTNGQC 251
Query: 235 ECKDNVEGAQC 245
CK V G C
Sbjct: 252 SCKLGVTGLTC 262
>UNIPROTKB|E1BPS6 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:DAAA02047205
EMBL:DAAA02047206 EMBL:DAAA02047207 EMBL:DAAA02047208
EMBL:DAAA02047209 EMBL:DAAA02047210 IPI:IPI00999849
Ensembl:ENSBTAT00000043858 Uniprot:E1BPS6
Length = 2772
Score = 145 (56.1 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 160 RCKRDTYPLGHGGSLNLQCNSEGR--C-QCKPGVTGDKCDRCDVNHYD--FGEAGCKSCE 214
RC RD G + + C+ G C +C+ G+ C+RC + G GC+ C+
Sbjct: 1141 RCSRDC-----GCNFHSHCHKRGPGFCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQ 1195
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CN G + +CD++ G C C+D+ EGA C+
Sbjct: 1196 CNGHGDPRRG-HCDNLSGLCFCQDHTEGAHCQ 1226
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 62/244 (25%), Positives = 89/244 (36%)
Query: 22 HGGH-CLDCQGDRDGPN---CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQC 77
+G H C + Q D P+ C C+ Y + C C G +N C C+C
Sbjct: 2111 NGHHDCNETQNCHDRPHGYECS-CKAGYTMDNVTGLCRPV-CAQ-GCVNGSCVEPDHCRC 2167
Query: 78 KPGVTGDKCD-RCDVN-HYDFGEAG----CKSCECNPAGSVKNTPNC------DSVKG-Q 124
G G C C N H D G C C + GS + C +V G
Sbjct: 2168 HFGFVGRNCSTECRCNRHSDCAGVGARDHCLLCHNHTKGS--HCEQCLPLFVGSAVGGGT 2225
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC 184
C RG H + SRK + A + + D + H + E C
Sbjct: 2226 CRPCHAFCRGNSHVCV---SRKELEIARR---EPEKYSLDPDEIEHWATEG-PSEDEAVC 2278
Query: 185 -QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNVEG 242
C+ GDKC+ C ++ Y + C C+CN G + C+ G C C++N E
Sbjct: 2279 VNCQNNSYGDKCESC-LHGYFLLDGKCTKCQCN--G---HADTCNEQDGTGCPCQNNTET 2332
Query: 243 AQCR 246
C+
Sbjct: 2333 GTCQ 2336
Score = 126 (49.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 37/119 (31%), Positives = 48/119 (40%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN F + C ++ G G C +CQ G +CE+CR + +G C C C
Sbjct: 1146 CGCN-FHSHC-------HKRGPG-FCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQC 1196
Query: 60 NPIGSLNL-QC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC--ECNPAGSVKN 114
N G C N G C C+ G C C +Y AG SC EC + N
Sbjct: 1197 NGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAG-GSCFRECGGRALLTN 1254
Score = 69 (29.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 15/45 (33%), Positives = 18/45 (40%)
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS----CECNP 108
QC G C C+PG G C + + Y C S C C P
Sbjct: 151 QCQPPGVCVCEPGWGGPDCSLQECSAYCGSHGTCTSPLGPCRCEP 195
Score = 61 (26.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ C+ + C S G C+C+PG G CD
Sbjct: 169 CSLQECSAYCGSHGTCTSPLGPCRCEPGFLGRACD 203
Score = 53 (23.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 23/83 (27%), Positives = 28/83 (33%)
Query: 172 GSLNLQCNSEGRC----QCKP--GVTGDKCDRCDVNHYDFGEAG--CKSCECNPAGSVKN 223
GS G C +C P GV G RC G AG C+ C + N
Sbjct: 1386 GSARCGSGGPGSCPVPQECVPQDGVPGAGLCRCPQ-----GWAGPHCRMAVCPENCNAHN 1440
Query: 224 -TPNCDSVKGQCECKDNVEGAQC 245
C+ G C C + G C
Sbjct: 1441 GAGTCNQSLGVCVCAEGFGGPDC 1463
Score = 40 (19.1 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 13/43 (30%), Positives = 13/43 (30%)
Query: 209 GCKSCECNPAGSVKNTPNC---DSVKGQ--CECKDNVEGAQCR 246
G C GS C D V G C C G CR
Sbjct: 1386 GSARCGSGGPGSCPVPQECVPQDGVPGAGLCRCPQGWAGPHCR 1428
>UNIPROTKB|F1N6Y9 [details] [associations]
symbol:CELSR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090251 "protein localization involved in establishment
of planar polarity" evidence=IEA] [GO:0090179 "planar cell polarity
pathway involved in neural tube closure" evidence=IEA] [GO:0060490
"lateral sprouting involved in lung morphogenesis" evidence=IEA]
[GO:0060489 "planar dichotomous subdivision of terminal units
involved in lung branching morphogenesis" evidence=IEA] [GO:0060488
"orthogonal dichotomous subdivision of terminal units involved in
lung branching morphogenesis" evidence=IEA] [GO:0048105
"establishment of body hair planar orientation" evidence=IEA]
[GO:0045176 "apical protein localization" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0042249 "establishment
of planar polarity of embryonic epithelium" evidence=IEA]
[GO:0042060 "wound healing" evidence=IEA] [GO:0032956 "regulation
of actin cytoskeleton organization" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0007266 "Rho
protein signal transduction" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR001881
InterPro:IPR017981 InterPro:IPR017983 Pfam:PF00002 Pfam:PF00008
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00249 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
SMART:SM00008 SMART:SM00179 SMART:SM00181 SMART:SM00303
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0009952 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
GO:GO:0007626 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0001942 GO:GO:0007266
GO:GO:0001843 GO:GO:0042060 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0032956
InterPro:IPR022624 Pfam:PF12003 GeneTree:ENSGT00700000104170
GO:GO:0045176 Pfam:PF02210 GO:GO:0048105 GO:GO:0042249
GO:GO:0060490 GO:GO:0060488 GO:GO:0090179 GO:GO:0060489
GO:GO:0090251 EMBL:DAAA02014976 EMBL:DAAA02014977 EMBL:DAAA02014978
EMBL:DAAA02014979 IPI:IPI00694670 Ensembl:ENSBTAT00000010571
OMA:ALRSNLH Uniprot:F1N6Y9
Length = 1675
Score = 163 (62.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 33/83 (39%), Positives = 47/83 (56%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVT 82
G DC ++ C+ C++NYY+ G + C C+C P GS + C+ + G+C CKPGV
Sbjct: 621 GFDADC--NKTSGQCQ-CKENYYRPPGQDACLPCDCFPHGSHSRVCDMDTGQCSCKPGVI 677
Query: 83 GDKCDRCDVNHYDFGEAGCKSCE 105
G +C+RCD N F E CE
Sbjct: 678 GRQCNRCD-N--PFAEVTVLGCE 697
>MGI|MGI:1920951 [details] [associations]
symbol:Megf11 "multiple EGF-like-domains 11" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0010842 "retina layer formation"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IDA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
MGI:MGI:1920951 GO:GO:0016021 GO:GO:0016323 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 GO:GO:0010842 GO:GO:0034109
HOGENOM:HOG000294130 Pfam:PF12661 GeneTree:ENSGT00690000101691
HSSP:P01132 HOVERGEN:HBG108333 OrthoDB:EOG42JNQJ CTD:84465
EMBL:AK122555 EMBL:AK048840 EMBL:AK051642 EMBL:AK160406
IPI:IPI00654415 IPI:IPI00752960 IPI:IPI00756127 IPI:IPI00986520
RefSeq:NP_001127871.1 RefSeq:NP_766110.3 UniGene:Mm.127721
UniGene:Mm.405602 ProteinModelPortal:Q80T91 SMR:Q80T91
STRING:Q80T91 PhosphoSite:Q80T91 PRIDE:Q80T91
Ensembl:ENSMUST00000068967 Ensembl:ENSMUST00000093829
Ensembl:ENSMUST00000118485 GeneID:214058 KEGG:mmu:214058
UCSC:uc009qby.2 UCSC:uc009qbz.2 UCSC:uc009qca.2 InParanoid:Q80T91
NextBio:374170 Bgee:Q80T91 CleanEx:MM_MEGF11 Genevestigator:Q80T91
Uniprot:Q80T91
Length = 1091
Score = 161 (61.7 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 73/253 (28%), Positives = 95/253 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
GHC C G C+ C + G N +C+C GS C+ E G C+C PG
Sbjct: 548 GHCC-CLAGWTGIRCDSTCPPGRW---GPNCSVSCSCENGGS----CSPEDGSCECAPGF 599
Query: 82 TGDKCDR-CDVNHYDFGEA----------G-CKS----CECNP--AGSVKNTPNCDSVKG 123
G C R C Y G A G C CEC P +G++ N G
Sbjct: 600 RGPLCQRICPPGFYGHGCAQPCPLCVHSRGPCHHISGICECLPGFSGALCNQVCAGGHFG 659
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL--------- 174
Q + AQL S T + P W + C + P G GS
Sbjct: 660 Q-DCAQLCSCANNGTCSPIDGSCQCFPG----WIGKDCSQ-ACPSGFWGSACFHTCSCHN 713
Query: 175 NLQCNSE-GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKG 232
C++E G C C PG TG C RC FG+ C+C +N +CD + G
Sbjct: 714 GASCSAEDGACHCTPGWTGLFCTQRCPSAF--FGKDCGHICQC------QNGASCDHITG 765
Query: 233 QCECKDNVEGAQC 245
+C C+ G C
Sbjct: 766 KCTCRTGFSGRHC 778
Score = 151 (58.2 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 63/231 (27%), Positives = 88/231 (38%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGE 98
+C YY+ +GD FC C ++ +C S C C+PG G C CD H+ G
Sbjct: 86 QCCPGYYE-NGD-FCIPL-CTE-ECMHGRCVSPDTCHCEPGWGGPDCSSGCDSEHW--GP 139
Query: 99 AGCKSCECNPAGSVKN--TPNCDSVKG----QCESAQLSSRGRVHTELRVQSRK--NFDP 150
C+C G++ N T C G +CE +L Q + DP
Sbjct: 140 HCSNRCQCQN-GALCNPITGACVCAPGFRGWRCEELCAPGTHGKGCQLLCQCHHGASCDP 198
Query: 151 -AGNRI----WDLRRCKRDTYPLGHGGSLNLQCNSE---------GRCQCKPGVTGDKCD 196
G + + C+ P HG L+C + G C C PG TG C
Sbjct: 199 RTGECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCA 258
Query: 197 R-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ C FG+ + C C+ G CD V GQC C G +C+
Sbjct: 259 QPCPPG--TFGQNCSQDCPCHHGGQ------CDHVTGQCHCTAGYMGDRCQ 301
Score = 126 (49.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 56/242 (23%), Positives = 82/242 (33%)
Query: 23 GGHCLD-CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
G C C G NC + ++ D+ C+C G + +C E C G
Sbjct: 254 GAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHCTA-GYMGDRCQEE----CPFGT 308
Query: 82 TGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTEL 140
G C RCD ++ +CEC P K P+C + C +
Sbjct: 309 FGFLCSQRCDCHNGGQCSPATGACECEPG--YKG-PSCQ--ERLCPEGLHGPGCTLPCPC 363
Query: 141 RVQSRKNFDPAGNRI-----WDLRRCKRDTYPLGH-GGSLNLQCNSE---------GRCQ 185
++ + P W C ++ P G+ G L C + G C
Sbjct: 364 DTENTISCHPVTGACTCQPGWSGHYCN-ESCPAGYYGNGCQLPCTCQNGADCHSITGSCT 422
Query: 186 CKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C PG G+ C C Y C S C C+ G+ C V G C C++ +G
Sbjct: 423 CAPGFMGEVCAVPCAAGTYG---PNCSSVCSCSNGGT------CSPVDGSCTCREGWQGL 473
Query: 244 QC 245
C
Sbjct: 474 DC 475
Score = 119 (46.9 bits), Expect = 0.00043, P = 0.00043
Identities = 64/243 (26%), Positives = 83/243 (34%)
Query: 23 GGHCLD--CQGDRDGPNCE-KCR-DNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
G C + C GP C C D S AC C P G CN C
Sbjct: 340 GPSCQERLCPEGLHGPGCTLPCPCDTENTISCHPVTGACTCQP-GWSGHYCNES----CP 394
Query: 79 PGVTGDKCDR-CDVNHYDFGEAGCKSCECNPA--GSVKNTPNCDSVKG-QCESAQLSSRG 134
G G+ C C + + SC C P G V P G C S S G
Sbjct: 395 AGYYGNGCQLPCTCQNGADCHSITGSCTCAPGFMGEVCAVPCAAGTYGPNCSSVCSCSNG 454
Query: 135 RVHTEL--RVQSRKNFD------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQ 185
+ + R+ + P + W L C +T +G + C+ +G C
Sbjct: 455 GTCSPVDGSCTCREGWQGLDCSLPCPSGTWGLN-CN-ETCICANGAA----CSPFDGSCA 508
Query: 186 CKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
C PG GD C+ C FG + C+C+ A CD V G C C G +
Sbjct: 509 CTPGWLGDSCELPCPDG--TFGLNCSEHCDCSHADG------CDPVTGHCCCLAGWTGIR 560
Query: 245 CRS 247
C S
Sbjct: 561 CDS 563
Score = 118 (46.6 bits), Expect = 0.00056, P = 0.00056
Identities = 28/90 (31%), Positives = 40/90 (44%)
Query: 159 RRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECN 216
+ C +D P HGG QC+ G+C C G GD+C + C FG + C+C+
Sbjct: 268 QNCSQDC-PCHHGG----QCDHVTGQCHCTAGYMGDRCQEECPFG--TFGFLCSQRCDCH 320
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G C G CEC+ +G C+
Sbjct: 321 NGGQ------CSPATGACECEPGYKGPSCQ 344
>UNIPROTKB|E1C393 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0014719 "satellite cell activation" evidence=IEA] [GO:0014816
"satellite cell differentiation" evidence=IEA] [GO:0014841
"satellite cell proliferation" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IEA] [GO:0043654 "recognition of
apoptotic cell" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0051147 "regulation of
muscle cell differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0034109
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0051147 OMA:FGCNLTC
GO:GO:0014719 GO:GO:0014841 EMBL:AADN02073828 EMBL:AADN02073829
EMBL:AADN02073830 IPI:IPI00580976 ProteinModelPortal:E1C393
Ensembl:ENSGALT00000023694 Uniprot:E1C393
Length = 1132
Score = 161 (61.7 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 67/263 (25%), Positives = 97/263 (36%)
Query: 13 DKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS- 71
DK ++ R C C+ GPNC D+ + G + + C C G+L CN
Sbjct: 111 DKCVHGRCIAPNTC-QCEPGWGGPNCSSACDSDHW--GPHCSSRCQCKN-GAL---CNPI 163
Query: 72 EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKN-TPNCDSVKGQ----C 125
G C C G G +C+ RCD Y G + C+C + + T C G C
Sbjct: 164 TGACHCASGFKGWRCEERCDQGTY--GNDCHQKCQCQNGATCDHVTGECRCPPGYTGAFC 221
Query: 126 ESAQLSSRGRVHTELRVQSRKN----------FDPAGNRIWDL---RRCKRDTYPLGHGG 172
E + E R + P G + + C Y G+
Sbjct: 222 EDLCPPGKHGPQCEERCPCQNGGICHHVTGECACPPGWMTQGMVCGQPCPEGRY--GNNC 279
Query: 173 SLNLQCNS-------EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
S QC++ G+C C PG TG++C D C V Y G ++C+C G
Sbjct: 280 SQECQCHNGGICDSATGQCHCSPGYTGERCQDECPVGTY--GVRCAETCQCMNGGK---- 333
Query: 225 PNCDSVKGQCECKDNVEGAQCRS 247
C + G C C+ G C +
Sbjct: 334 --CYHISGACLCEPGYTGEHCET 354
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 69/248 (27%), Positives = 103/248 (41%)
Query: 23 GGHCLD-CQGDRDGPNCEK---CRDN--YYQKSGDNFCT--------ACN--CNPIGSLN 66
G C D C + GP CE+ C++ + +G+ C C C P G
Sbjct: 218 GAFCEDLCPPGKHGPQCEERCPCQNGGICHHVTGECACPPGWMTQGMVCGQPC-PEGRYG 276
Query: 67 LQCNSEGRCQC-KPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS--VKNTPNCDSVKG 123
C+ E CQC G+ +C + GE C+ EC P G+ V+ C + G
Sbjct: 277 NNCSQE--CQCHNGGICDSATGQCHCSPGYTGER-CQD-EC-PVGTYGVRCAETCQCMNG 331
Query: 124 -QC---ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN 179
+C A L G +T ++R P G ++ L+ K+ L + S C+
Sbjct: 332 GKCYHISGACLCEPG--YTGEHCETR--LCPEG--VYGLKCDKKCPCHLHNTWS----CH 381
Query: 180 S-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
G C CKPG +G C+ C Y G++ + C C +N +CDSV G+C C
Sbjct: 382 PMSGECSCKPGWSGLYCNETCSPGFY--GKSCQQICSC------QNGADCDSVTGKCICA 433
Query: 238 DNVEGAQC 245
+GA C
Sbjct: 434 SGFKGADC 441
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 61/249 (24%), Positives = 91/249 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C +C G C++ C +Y C C + G + + G C C PG T
Sbjct: 600 GIC-ECAPGYRGTTCQRICSPGFYGHRCSQTCPQC-VHSSGPCH---HITGLCDCLPGFT 654
Query: 83 GDKCDR-CDVNHYD---FGEAGC----------KSCECNPA--GSVKNTPNCDSVKG-QC 125
G C+ C + G C +SC+C P GS + P S G C
Sbjct: 655 GALCNEVCPSGRFGKNCIGICTCTNNGTCNPIDRSCQCYPGWIGSDCSQPCPPSHWGPNC 714
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS----- 180
G + + + P ++ +RC Y G +L QC +
Sbjct: 715 IHTCNCHNGAYCSAYDGECKCT--PGWTGLYCTQRCPLGFY--GKDCALICQCRNGADCD 770
Query: 181 --EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ G G C+ +C Y +G C+ C+C N CD + G C C
Sbjct: 771 HISGQCTCRTGFMGKHCEQKCPQGTYGYG---CRQICDC------LNNSTCDHITGTCYC 821
Query: 237 KDNVEGAQC 245
+GA+C
Sbjct: 822 SPGWKGARC 830
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 63/240 (26%), Positives = 87/240 (36%)
Query: 35 GPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKC-DRCDVN 92
G C + C + Y G+N C C+ G + ++ G+C C PG TG++C D C V
Sbjct: 263 GMVCGQPCPEGRY---GNNCSQECQCHNGGICD---SATGQCHCSPGYTGERCQDECPVG 316
Query: 93 HYDFGEAG-CK------------SCECNPA--GSVKNTPNC-DSVKG-QCES---AQLSS 132
Y A C+ +C C P G T C + V G +C+ L +
Sbjct: 317 TYGVRCAETCQCMNGGKCYHISGACLCEPGYTGEHCETRLCPEGVYGLKCDKKCPCHLHN 376
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ----CNS-EGRCQCK 187
H + + P + ++ C Y + Q C+S G+C C
Sbjct: 377 TWSCHP---MSGECSCKPGWSGLYCNETCSPGFYGKSCQQICSCQNGADCDSVTGKCICA 433
Query: 188 PGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G G C C Y C S C C KN C SV G C CK G C
Sbjct: 434 SGFKGADCGTPCLPGTYG---VNCSSVCNC------KNEAICSSVDGSCTCKAGWHGVDC 484
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 75/272 (27%), Positives = 97/272 (35%)
Query: 1 CNC-NGFSNRCF-FDKELYNRTGHGG-HCLD--CQGDRDGPNCEK-CRDNYYQK-SGDNF 53
C C NG +C+ G+ G HC C G C+K C + + S
Sbjct: 326 CQCMNG--GKCYHISGACLCEPGYTGEHCETRLCPEGVYGLKCDKKCPCHLHNTWSCHPM 383
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR---------CD-VNHYDFGEAGCKS 103
C+C P G L CN C PG G C + CD V +G K
Sbjct: 384 SGECSCKP-GWSGLYCNET----CSPGFYGKSCQQICSCQNGADCDSVTGKCICASGFKG 438
Query: 104 CECN-PAGSVKNTPNCDSV---KGQ--CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWD 157
+C P NC SV K + C S S + V N P+G W
Sbjct: 439 ADCGTPCLPGTYGVNCSSVCNCKNEAICSSVDGSCTCKAGWH-GVDCSINC-PSGT--WG 494
Query: 158 LRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCEC 215
L C L +GG+ CN+ +G C C PG G+KC+ C Y G + C+C
Sbjct: 495 LG-CNLTCQCL-NGGA----CNALDGTCTCAPGWRGEKCELPCQDGTY--GMDCAERCDC 546
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ A C G C C G C S
Sbjct: 547 SHADG------CHPTTGYCRCLPGWSGIHCDS 572
>UNIPROTKB|E2RQ32 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055001 "muscle cell development"
evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0043654 "recognition
of apoptotic cell" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AAEX03007755
ProteinModelPortal:E2RQ32 Ensembl:ENSCAFT00000000947 Uniprot:E2RQ32
Length = 1150
Score = 161 (61.7 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 72/261 (27%), Positives = 101/261 (38%)
Query: 9 RCFFDKELYNRTGHGG-HCLD-CQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNPI-GS 64
RC G GG +C C GD GP+C +C+ K+G CNPI G+
Sbjct: 117 RCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSRCQC----KNG------ALCNPITGA 166
Query: 65 LNLQCNSEG-RCQ--CKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CD 119
+ G RC+ C+ G G+ C RC + + C C P + + C
Sbjct: 167 CHCAAGFRGWRCEDRCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCP 226
Query: 120 SVK-G-QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG---SL 174
K G QCE G + + + P+G W C + P G G S
Sbjct: 227 PGKHGPQCEQRCPCQNGGICHHVTGECSC---PSG---WLGTVCGQPC-PEGRFGKNCSQ 279
Query: 175 NLQCNS-------EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
QC++ G+C C PG TG++C D C V Y G ++C+C G
Sbjct: 280 ECQCHNGGTCDAATGQCHCSPGYTGERCQDECPVGTY--GVRCAETCQCVNGGK------ 331
Query: 227 CDSVKGQCECKDNVEGAQCRS 247
C V G C C+ G C +
Sbjct: 332 CYHVSGSCLCEAGFAGEHCEA 352
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 71/244 (29%), Positives = 100/244 (40%)
Query: 23 GGHCLD-CQGDRDGPNCEK---CRDN--YYQKSGDNFC------TACN--CNPIGSLNLQ 68
G C D C + GP CE+ C++ + +G+ C T C C P G
Sbjct: 218 GAFCEDLCPPGKHGPQCEQRCPCQNGGICHHVTGECSCPSGWLGTVCGQPC-PEGRFGKN 276
Query: 69 CNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGS--VKNTPNCDSVKG-Q 124
C+ E CQC G T D +C + GE C+ EC P G+ V+ C V G +
Sbjct: 277 CSQE--CQCHNGGTCDAATGQCHCSPGYTGER-CQD-EC-PVGTYGVRCAETCQCVNGGK 331
Query: 125 CESAQLSSRGRV-HTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EG 182
C S ++R P G ++ ++ KR L + S C+ G
Sbjct: 332 CYHVSGSCLCEAGFAGEHCEAR--LCPEG--LYGIKCDKRCPCHLDNTHS----CHPMSG 383
Query: 183 RCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVE 241
C CKPG +G C+ C FGEA + C C+ N +CDSV G+C C +
Sbjct: 384 ECACKPGWSGLYCNETCSPGF--FGEACQQICSCH------NGADCDSVTGKCICAPGFK 435
Query: 242 GAQC 245
G C
Sbjct: 436 GIDC 439
Score = 144 (55.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 75/273 (27%), Positives = 98/273 (35%)
Query: 1 CNC-NGFSNRCFF-DKELYNRTGHGG-HCLD--CQGDRDGPNCEK---CR-DNYYQKSGD 51
C C NG +C+ G G HC C G C+K C DN + S
Sbjct: 324 CQCVNG--GKCYHVSGSCLCEAGFAGEHCEARLCPEGLYGIKCDKRCPCHLDNTH--SCH 379
Query: 52 NFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPA- 109
C C P G L CN C PG G+ C + C ++ ++ C C P
Sbjct: 380 PMSGECACKP-GWSGLYCNET----CSPGFFGEACQQICSCHNGADCDSVTGKCICAPGF 434
Query: 110 -GSVKNTP--------NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD-----PAGNRI 155
G + P NC S+ G C++ + S + D P+G
Sbjct: 435 KGIDCSIPCPLETYGINCSSLCG-CKNDAVCSPVDGSCTCKA-GWHGVDCSISCPSGT-- 490
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCE 214
W C L HGG+ N Q +G C C PG GDKC+ C Y A + C+
Sbjct: 491 WGFS-CNLTCQCL-HGGACNTQ---DGTCTCAPGWRGDKCELPCQDGTYGLNCA--ERCD 543
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C+ A C S G C C G C S
Sbjct: 544 CSHADG------CHSTTGHCRCLPGWSGVHCDS 570
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 61/249 (24%), Positives = 92/249 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C +C G C++ C +Y C C + G + + G C C PG T
Sbjct: 598 GIC-ECAPGFRGTTCQRICSPGFYGHRCSQTCPQC-VHSSGPCH---HITGLCDCLPGFT 652
Query: 83 GDKCDR-CDVNHYDFGEAG-C------------KSCECNPA--GSVKNTPNCDSVKG-QC 125
G C+ C + AG C +SC+C P GS + P + G C
Sbjct: 653 GALCNEVCPSGRFGKNCAGVCTCTNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAHWGPNC 712
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS----- 180
G + + + P ++ +RC Y G +L QC +
Sbjct: 713 IHTCNCHNGAFCSAYDGECKCT--PGWTGLYCTQRCPLGFY--GKDCALICQCQNGADCD 768
Query: 181 --EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ G G C+ +C Y +G C+ C+C N CD + G C C
Sbjct: 769 HISGQCTCRTGFMGKHCEQKCPAGTYGYG---CRQICDC------LNNSTCDHITGTCYC 819
Query: 237 KDNVEGAQC 245
+GA+C
Sbjct: 820 SPGWKGARC 828
>UNIPROTKB|G3MXZ5 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR017981 Pfam:PF00002 Pfam:PF00008
Pfam:PF01825 PRINTS:PR00249 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 SMART:SM00008 SMART:SM00179
SMART:SM00181 SMART:SM00208 SMART:SM00303 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0004930 GO:GO:0007218
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
InterPro:IPR022624 Pfam:PF12003 GeneTree:ENSGT00700000104170
Pfam:PF02210 EMBL:DAAA02007576 Ensembl:ENSBTAT00000063317
Uniprot:G3MXZ5
Length = 1482
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 59/183 (32%), Positives = 77/183 (42%)
Query: 41 CRDNY--YQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT-GDKCDRCDVNHYD-F 96
C D++ Y S D NC + LN C + C KP G C+ C ++ +
Sbjct: 673 CSDDWDSYSCSCDPGYYGDNCTNVCDLN-PCEHQSMCTRKPSAPHGYTCE-CPPSYLGPY 730
Query: 97 GEAGC-KSCECNPAGSVKNTP-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
E + C G P NCD KG +S G H + ++ P G+
Sbjct: 731 CETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTS-GECHCK-----ENHYRPPGSP 784
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
L C D YP G SL+ C+ EG+C CKPGV G +CDRCD N F E C
Sbjct: 785 ACLL--C--DCYPTG---SLSRVCDPEEGQCPCKPGVIGRQCDRCD-N--PFAEVTTNGC 834
Query: 214 ECN 216
E N
Sbjct: 835 EVN 837
Score = 146 (56.5 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 59/195 (30%), Positives = 75/195 (38%)
Query: 61 PIGSLNLQCNSEGRCQCKPGVT-GDKCDR--CDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
P G +L + +PG + D CD C N Y + SC C+P N N
Sbjct: 636 PEGVSSLDPSRGESINVEPGCSLPDPCDSNPCPANSYCSDDWDSYSCSCDPGYYGDNCTN 695
Query: 118 -CDSVKGQCESAQLSSR--GRVHTELRVQSRKNFDP-AGNRIWDLRRCKRDTYPLGHGGS 173
CD CE + +R H P RI D + C R + GH
Sbjct: 696 VCDL--NPCEHQSMCTRKPSAPHGYTCECPPSYLGPYCETRI-D-QPCPRGWW--GHPTC 749
Query: 174 LNLQCN-SEG-RCQCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSV 230
C+ S+G C T +C C NHY G C C+C P GS+ CD
Sbjct: 750 GPCNCDVSKGFDPDCNK--TSGEC-HCKENHYRPPGSPACLLCDCYPTGSLSRV--CDPE 804
Query: 231 KGQCECKDNVEGAQC 245
+GQC CK V G QC
Sbjct: 805 EGQCPCKPGVIGRQC 819
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 35/108 (32%), Positives = 43/108 (39%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNCNPIGSLNLQCN-SEGRCQCK 78
HG C +C GP CE D + G C CNC+ + CN + G C CK
Sbjct: 716 HGYTC-ECPPSYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCK 774
Query: 79 PGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
NHY G C C+C P GS+ CD +GQC
Sbjct: 775 E------------NHYRPPGSPACLLCDCYPTGSLSRV--CDPEEGQC 808
Score = 61 (26.5 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 29/90 (32%), Positives = 40/90 (44%)
Query: 1 CNCN-GFS-NRCFFDKEL-YNRT-GHGGHCLDCQGD-----RDGPNCEKCRDNYYQKSGD 51
C C GF+ + C + +L Y+R G GHC +G RDG E C + +SG
Sbjct: 139 CRCPPGFTGDYCETEVDLCYSRPCGPHGHCRSREGGYTCLCRDGYTGEHCEVS--ARSGR 196
Query: 52 NFCTACNCNPIGS-LNLQCNSEGRCQCKPG 80
CT C G+ +NL +C C G
Sbjct: 197 --CTPGVCKNGGTCVNLLVGGF-KCNCPSG 223
>UNIPROTKB|E2RM39 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:AAEX03000913
EMBL:AAEX03000914 Ensembl:ENSCAFT00000007776 Uniprot:E2RM39
Length = 2787
Score = 144 (55.7 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 160 RCKRDTYPLGHGGSLNLQCNSEGR--C-QCKPGVTGDKCDRCDVNHYD--FGEAGCKSCE 214
RC RD G + + C G C +C+ G+ C+RC + G GC+ C+
Sbjct: 1157 RCSRDC-----GCNFHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQ 1211
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CN G + +CD++ G C C+D+ EGA C+
Sbjct: 1212 CNGHGDPRRG-HCDNLSGLCFCQDHTEGAHCQ 1242
Score = 130 (50.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 64/248 (25%), Positives = 90/248 (36%)
Query: 22 HGGH-CLDCQGDRDGPN---CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQC 77
+G H C + Q D P+ C C+ Y + C C G +N C C+C
Sbjct: 2126 NGHHDCNETQNCHDRPHGYECS-CKAGYTMDNVTGLCRPV-CAQ-GCVNGSCVEPDHCRC 2182
Query: 78 KPGVTGDKCD-RCDVN-HYDFGEAG----CKSCECNPAGSVKNTPNC------DSVKG-Q 124
G G C C N H + G C C + GS + C +V G
Sbjct: 2183 HFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNHTKGS--HCEQCLPLFVGSAVGGGT 2240
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNL----QCNS 180
C RG H + SRK + A R + + YPL N
Sbjct: 2241 CRPCHAFCRGNSHVCV---SRKELEMA--------RKEPEKYPLDPEEIENWVTEGPSED 2289
Query: 181 EGRC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKD 238
E C C+ GDKC+ C ++ Y + C C+CN G + C+ G C C++
Sbjct: 2290 EAVCVNCQNNSYGDKCESC-LHGYFLLDGKCTKCQCN--G---HADTCNEQDGTGCPCQN 2343
Query: 239 NVEGAQCR 246
N E C+
Sbjct: 2344 NTETGTCQ 2351
Score = 124 (48.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/119 (31%), Positives = 46/119 (38%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN F + C R G C +CQ G +CE+CR + +G C C C
Sbjct: 1162 CGCN-FHSHC--------RKRGPGFCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQC 1212
Query: 60 NPIGSLNL-QC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC--ECNPAGSVKN 114
N G C N G C C+ G C C +Y AG SC EC + N
Sbjct: 1213 NGHGDPRRGHCDNLSGLCFCQDHTEGAHCQFCSPGYYGDPRAG-GSCFRECGGRALLTN 1270
Score = 69 (29.3 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 15/45 (33%), Positives = 18/45 (40%)
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS----CECNP 108
QC + G C C+PG G C + Y C S C C P
Sbjct: 150 QCQAPGVCTCEPGWGGPDCSLQECPAYCGSHGTCASPLGPCRCEP 194
Score = 57 (25.1 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 20/69 (28%), Positives = 26/69 (37%)
Query: 20 TGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCK 78
+GHG CQ P C + G C+ C + C S G C+C+
Sbjct: 146 SGHG----QCQA----PGVCTCEPGW----GGPDCSLQECPAYCGSHGTCASPLGPCRCE 193
Query: 79 PGVTGDKCD 87
PG G CD
Sbjct: 194 PGFLGRACD 202
Score = 50 (22.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 22/83 (26%), Positives = 27/83 (32%)
Query: 172 GSLNLQCNSEGRC----QCKP--GVTGDKCDRCDVNHYDFGEAG--CKSCEC-NPAGSVK 222
GS G C +C P G TG RC G AG C+ C +
Sbjct: 1402 GSARCGSGGPGSCPVPQECIPQDGATGAGLCRCPQ-----GWAGPHCRMALCPENCNAHS 1456
Query: 223 NTPNCDSVKGQCECKDNVEGAQC 245
C+ G C C + G C
Sbjct: 1457 GAGTCNQSLGVCICAEGFGGPDC 1479
Score = 36 (17.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQC 77
C AC +P + N +G C
Sbjct: 906 CHACTQDPFCEWHQSTNRKGDAAC 929
>FB|FBgn0031981 [details] [associations]
symbol:CG7466 species:7227 "Drosophila melanogaster"
[GO:0016020 "membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
EMBL:AE014134 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR009030 SUPFAM:SSF57184
HSSP:P35555 Pfam:PF12661 InterPro:IPR011043 SUPFAM:SSF50965
OMA:GHSMVFH FlyBase:FBgn0031981 RefSeq:NP_609180.2 UniGene:Dm.2153
ProteinModelPortal:Q9VLT6 SMR:Q9VLT6 MINT:MINT-1329221
EnsemblMetazoa:FBtr0079541 GeneID:34099 KEGG:dme:Dmel_CG7466
UCSC:CG7466-RA InParanoid:Q9VLT6 PhylomeDB:Q9VLT6 GenomeRNAi:34099
NextBio:786863 ArrayExpress:Q9VLT6 Bgee:Q9VLT6 Uniprot:Q9VLT6
Length = 2898
Score = 147 (56.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 68/238 (28%), Positives = 97/238 (40%)
Query: 26 CLDCQGDRDGPNCEK---C-----RDNYYQ---KSGDNFCTACNCNPIGSLNLQCNSE-G 73
C C+ R+ +C + C RDN + GD +A NC+ + + ++E
Sbjct: 1123 CKSCEQHRNCSSCLRTLSCGWCFDRDNPIEGICMQGDFSYSAGNCSLALNSSSHHDAEWA 1182
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEAGC-KSCEC-NPAGSVKNTPNCDSVKGQCESAQLS 131
QC P V D C + +D C K +C N GS NC +G + S
Sbjct: 1183 YAQC-PDV-----DECGLGLHD-----CHKEAKCTNTQGSY----NCHCRRGYIGDGKFS 1227
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRC-QCKPG 189
R EL + P L D L G + + CN G+C QC+
Sbjct: 1228 CV-RTCYELCQNGNCSGPPDYTCRCALGWTGADC-GLSCGCNNHSTCNERLGKCDQCQDW 1285
Query: 190 VTGDKCDRCDVNHYDFGEA--GCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G+KC+RC Y A GC CECN G+ ++ C+ G+C CKDN +G C
Sbjct: 1286 SEGEKCERCRQGSYGNATAPHGCLPCECNGHGN-QDLGVCNVSNGECYCKDNTQGLNC 1342
Score = 145 (56.1 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 39/119 (32%), Positives = 51/119 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN S C ++ L G C CQ +G CE+CR Y + + C C C
Sbjct: 1264 CGCNNHST-C--NERL-------GKCDQCQDWSEGEKCERCRQGSYGNATAPHGCLPCEC 1313
Query: 60 NPIGSLNLQ-CN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC--ECNPAGSVKN 114
N G+ +L CN S G C CK G C+ C +Y G K C +C G + N
Sbjct: 1314 NGHGNQDLGVCNVSNGECYCKDNTQGLNCELCAPGYYGDPRGGGK-CYYQCESRGILTN 1371
Score = 133 (51.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 60/238 (25%), Positives = 95/238 (39%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDK 85
C+D G C C Y ++ G C C+ G + C S +CQC G G
Sbjct: 2247 CIDLD-TAVGYKCV-CAQGYREEQGA--CLPV-CSQ-GCVRGNCVSPDQCQCDFGYVGAN 2300
Query: 86 CD-RCDVNHYDFGEAG-----CKSCECNPAGSVKNTPNCDSV------KGQ-CESAQLSS 132
C +C N + E+ C C N G + C + +G C+
Sbjct: 2301 CSIQCLCNGHSNCESSSRLDICLKCHNNTMG--EQCEKCQPLFVGNPREGHACQPCLDYC 2358
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTG 192
G H+++ V + DPA ++++ R + + L G + N C +C G
Sbjct: 2359 HG--HSDVCVAY--DADPA---VFNMTRSELERI-LQEGPAYNATC-----LRCGNHTAG 2405
Query: 193 DKCDRCDVNHYDFGE---AGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNVEG-AQC 245
D+CD C ++ E C+ C+C+ G++ CD V G+ C C +N E A C
Sbjct: 2406 DRCDSCLTGYFRGSEDLHKECRPCQCHGHGNI-----CDPVTGEKCNCANNTESDATC 2458
Score = 97 (39.2 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 47/178 (26%), Positives = 65/178 (36%)
Query: 68 QC-NSEG--RCQCKPGVTGDKCDRCDVNHYDFGEAG-CK-----SC---------ECNPA 109
+C N++G C C+ G GD C Y+ + G C +C +C +
Sbjct: 1204 KCTNTQGSYNCHCRRGYIGDGKFSCVRTCYELCQNGNCSGPPDYTCRCALGWTGADCGLS 1263
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFD-PAGNRIWDLRRCKRDTYPL 168
N C+ G+C+ Q S G R S N P G C+ +
Sbjct: 1264 CGCNNHSTCNERLGKCDQCQDWSEGEKCERCRQGSYGNATAPHG-----CLPCECN---- 1314
Query: 169 GHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC--ECNPAGSVKN 223
GHG CN S G C CK G C+ C +Y G K C +C G + N
Sbjct: 1315 GHGNQDLGVCNVSNGECYCKDNTQGLNCELCAPGYYGDPRGGGK-CYYQCESRGILTN 1371
Score = 68 (29.0 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 21/69 (30%), Positives = 32/69 (46%)
Query: 178 CNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
C+++ RC C G G C+ ++ C S CN A ++ CD+ G+C C
Sbjct: 1504 CDAQQRCVCPAGYVGASCE-IEI---------CPS-NCN-AKRMQGF--CDTEYGRCICS 1549
Query: 238 D-NVEGAQC 245
+ N GA C
Sbjct: 1550 NANYAGADC 1558
Score = 67 (28.6 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 4 NGFSNRCFFDKELYNRTGHG---GHCLDCQGDRDGPNCEK--CRDNYYQKSGDNFC--TA 56
+GF + L N HG GH C G+ GP+CE C + G C +
Sbjct: 139 DGFRASYYISNCLNNCHNHGKCVGHQCVCHGEWVGPDCEDEACPQRCGESQGRGRCQKSI 198
Query: 57 CNCN 60
C+C+
Sbjct: 199 CHCS 202
Score = 48 (22.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 226 NCDSVKGQCECKDNVEGAQC 245
NCD+V QC D G +C
Sbjct: 2239 NCDTVSEQCIDLDTAVGYKC 2258
Score = 41 (19.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
AGS + CD+ + +C C GA C
Sbjct: 1495 AGSCISPHICDAQQ-RCVCPAGYVGASC 1521
Score = 38 (18.4 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 117 NCDSVKGQC 125
NCD+V QC
Sbjct: 2239 NCDTVSEQC 2247
>UNIPROTKB|Q14162 [details] [associations]
symbol:SCARF1 "Scavenger receptor class F member 1"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0030169 "low-density lipoprotein particle binding"
evidence=IDA] [GO:0006898 "receptor-mediated endocytosis"
evidence=TAS] [GO:0004888 "transmembrane signaling receptor
activity" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=IDA] [GO:0005044 "scavenger receptor activity"
evidence=IDA] [GO:0006707 "cholesterol catabolic process"
evidence=IC] [GO:0010976 "positive regulation of neuron projection
development" evidence=ISS] [GO:0016322 "neuron remodeling"
evidence=ISS] [GO:0048680 "positive regulation of axon
regeneration" evidence=ISS] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 GO:GO:0016021 EMBL:CH471108 GO:GO:0006707
EMBL:AC130343 GO:GO:0016358 GO:GO:0016322 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 GO:GO:0048680 GO:GO:0004888
GO:GO:0030169 InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
Pfam:PF12661 eggNOG:NOG284054 HOGENOM:HOG000015093 EMBL:D86864
EMBL:AB052946 EMBL:AB052947 EMBL:AB052948 EMBL:AB052949
EMBL:AB052950 EMBL:D63483 EMBL:BC039735 IPI:IPI00066367
IPI:IPI00169257 IPI:IPI00169258 IPI:IPI00337750 IPI:IPI00337751
RefSeq:NP_003684.2 RefSeq:NP_663325.1 RefSeq:NP_663327.2
UniGene:Hs.647430 ProteinModelPortal:Q14162 SMR:Q14162
STRING:Q14162 PhosphoSite:Q14162 DMDM:311033530 PaxDb:Q14162
PRIDE:Q14162 Ensembl:ENST00000263071 Ensembl:ENST00000348987
Ensembl:ENST00000434376 Ensembl:ENST00000571272 GeneID:8578
KEGG:hsa:8578 UCSC:uc002fsy.1 UCSC:uc002fsz.1 UCSC:uc010cjv.1
CTD:8578 GeneCards:GC17M001537 H-InvDB:HIX0013404 HGNC:HGNC:16820
HPA:HPA035108 MIM:607873 neXtProt:NX_Q14162 PharmGKB:PA38420
HOVERGEN:HBG099941 InParanoid:Q14162 OMA:GWWGPEC OrthoDB:EOG4S1T6G
GenomeRNAi:8578 NextBio:32179 ArrayExpress:Q14162 Bgee:Q14162
CleanEx:HS_SCARF1 Genevestigator:Q14162 GermOnline:ENSG00000074660
Uniprot:Q14162
Length = 830
Score = 159 (61.0 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 70/255 (27%), Positives = 95/255 (37%)
Query: 16 LYNRTGHGGHCLDCQGDR----DGPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQ-- 68
L+ R G G LD +G P+ E +C + QK D CT C +
Sbjct: 12 LWTR-GTQGSELDPKGQHVCVASSPSAELQCCAGWRQK--DQECTIPICEGPDACQKDEV 68
Query: 69 CNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCES 127
C G C+CKPG G C RC ++ G +SC C+P G C+ G C+
Sbjct: 69 CVKPGLCRCKPGFFGAHCSSRCPGQYW--GPDCRESCPCHPHGQ------CEPATGACQ- 119
Query: 128 AQLSSRG-RVHTELRVQSRKNFDPAGNRI-----WDLRRCKRDTYPLGHGGSLNLQCN-S 180
Q G R DPA W C+R P + +C +
Sbjct: 120 CQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRR---PC-QCNTAAARCEQA 175
Query: 181 EGRCQCKPGVTGDKCD-RCDVN----HYDFGEAGCK----SCECNP-AGSVKNTPNCDSV 230
G C CKPG G +C RC+ + D G C+ EC V+ C +
Sbjct: 176 TGACVCKPGWWGRRCSFRCNCHGSPCEQDSGRCACRPGWWGPECQQQCECVRG--RCSAA 233
Query: 231 KGQCECKDNVEGAQC 245
G+C C GA+C
Sbjct: 234 SGECTCPPGFRGARC 248
Score = 146 (56.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 67/241 (27%), Positives = 93/241 (38%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSG--DNFCT-ACNCNPIGSLNLQCNSE-GRCQCKPGVTGD 84
CQ + CE+ K G C+ CNC+ GS C + GRC C+PG G
Sbjct: 163 CQCNTAAARCEQATGACVCKPGWWGRRCSFRCNCH--GS---PCEQDSGRCACRPGWWGP 217
Query: 85 KCDR-CDVNHYDFGEAGCKSCECNPA--GSVKNTPNCDSVKGQCESAQLSSRGRVHTEL- 140
+C + C+ A + C C P G+ P C + + A R + H E
Sbjct: 218 ECQQQCECVRGRCSAASGE-CTCPPGFRGARCELP-CPAGSHGVQCAHSCGRCK-HNEPC 274
Query: 141 --RVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQC----NSE------GRCQ-CK 187
S ++ +P W+ +C++ P G S QC + E G CQ C
Sbjct: 275 SPDTGSCESCEPG----WNGTQCQQPCLPGTFGESCEQQCPHCRHGEACEPDTGHCQRCD 330
Query: 188 PGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
PG G +C D C FGE +C GS CD+V G C C G C
Sbjct: 331 PGWLGPRCEDPCPTG--TFGEDCGSTCPTCVQGS------CDTVTGDCVCSAGYWGPSCN 382
Query: 247 S 247
+
Sbjct: 383 A 383
>UNIPROTKB|F1RGK2 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:FP102452
Ensembl:ENSSSCT00000003355 Uniprot:F1RGK2
Length = 2789
Score = 144 (55.7 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 160 RCKRDTYPLGHGGSLNLQCNSEGR--C-QCKPGVTGDKCDRCDVNHYD--FGEAGCKSCE 214
RC RD G + + C G C +C+ G+ C+RC + G GC+ C+
Sbjct: 1158 RCSRDC-----GCNFHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQ 1212
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
CN G + +CD++ G C C+D+ EGA C+
Sbjct: 1213 CNGHGDPRRG-HCDNLSGLCFCQDHTEGAHCQ 1243
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 65/246 (26%), Positives = 91/246 (36%)
Query: 22 HGGH-CLDCQGDRDGPN---CEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQC 77
+G H C + Q D P+ C C+ Y + C C G +N C C+C
Sbjct: 2128 NGHHDCNETQNCHDRPHGYECS-CKTGYTMDNVTGLCRPV-CAQ-GCVNGSCVEPDHCRC 2184
Query: 78 KPGVTGDKCD-RCDVN-HYDFGEAG----CKSCECNPAGSVKNTPNC------DSVKG-Q 124
G G C C N H + G C C + GS + C +V G
Sbjct: 2185 HFGFVGRNCSTECRCNRHSECAGVGARDHCLLCHNHTKGS--HCEQCLPLFVGSAVGGGT 2242
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRI--WDLRRCKRDTYPLGHGGSLNLQCNSEG 182
C RG H L SRK + A + L K + + + G S E
Sbjct: 2243 CRPCHAFCRGNSHVCL---SRKELEMARREPEKYSLDPDKIENW-VSEGPS-----EDEA 2293
Query: 183 RC-QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNV 240
C C+ GDKC+ C ++ Y E C C+CN G + C+ G C C++N
Sbjct: 2294 VCVNCQNNSYGDKCESC-LHGYFLLEGKCTKCQCN--G---HADTCNEQDGTGCPCQNNT 2347
Query: 241 EGAQCR 246
E C+
Sbjct: 2348 ETGTCQ 2353
Score = 125 (49.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 37/119 (31%), Positives = 46/119 (38%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY-QKSGDNFCTACNC 59
C CN F + C R G C +CQ G +CE+CR + +G C C C
Sbjct: 1163 CGCN-FHSHC--------RKRGPGFCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQC 1213
Query: 60 NPIGSLNL-QC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC--ECNPAGSVKN 114
N G C N G C C+ G C C +Y AG SC EC + N
Sbjct: 1214 NGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAG-GSCFRECGGRALLTN 1271
Score = 68 (29.0 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 15/45 (33%), Positives = 17/45 (37%)
Query: 68 QCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS----CECNP 108
QC G C C+PG G C + Y C S C C P
Sbjct: 151 QCQPPGVCVCEPGWGGPDCSLQECQAYCGSHGTCASPLGPCRCEP 195
Score = 58 (25.5 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 54 CTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCD 87
C+ C + C S G C+C+PG G CD
Sbjct: 169 CSLQECQAYCGSHGTCASPLGPCRCEPGFLGRACD 203
Score = 51 (23.0 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 19/78 (24%), Positives = 27/78 (34%)
Query: 169 GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN-TPNC 227
G GG + C C + GVTG +C + C+ C + N C
Sbjct: 1408 GSGGPGS--CPVPQECVPQDGVTGAGLCQCPQG---WAGPHCRMALCPENCNAHNGAGTC 1462
Query: 228 DSVKGQCECKDNVEGAQC 245
+ G C C + G C
Sbjct: 1463 NQSLGVCICAEGFGGPDC 1480
Score = 42 (19.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 13/43 (30%), Positives = 14/43 (32%)
Query: 209 GCKSCECNPAGSVKNTPNC---DSVKGQ--CECKDNVEGAQCR 246
G C GS C D V G C+C G CR
Sbjct: 1403 GSARCGSGGPGSCPVPQECVPQDGVTGAGLCQCPQGWAGPHCR 1445
>UNIPROTKB|Q234W8 [details] [associations]
symbol:TTHERM_00099820 "Putative uncharacterized protein"
species:312017 "Tetrahymena thermophila SB210" [GO:0004252
"serine-type endopeptidase activity" evidence=ISS]
InterPro:IPR000742 InterPro:IPR001368 PROSITE:PS00652 SMART:SM00181
GO:GO:0004252 InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261
SUPFAM:SSF57184 EMBL:GG662767 RefSeq:XP_001012130.2
ProteinModelPortal:Q234W8 EnsemblProtists:EAR91885 GeneID:7831937
KEGG:tet:TTHERM_00099820 Uniprot:Q234W8
Length = 898
Score = 158 (60.7 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 61/219 (27%), Positives = 83/219 (37%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNP----IGSLNLQCNSEGRCQCKPG 80
+CL C GD NC+ C Y + DN C CN N G+ LQCN C
Sbjct: 574 NCLTCNGDSSN-NCQDCNKGLYFQP-DNSCGQCNTNNGYFISGNKCLQCNQN----CLTC 627
Query: 81 VTGDKCDRCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHT- 138
+ KC +C++N+Y + C S C N ++N NC C + S+G T
Sbjct: 628 IDSTKCLKCNLNYYLLSDNTCSSNCSTNKGYYIENQ-NCLPCDASCLTCNGGSKGNCLTC 686
Query: 139 -ELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCK-PGVTGDKCD 196
QS K D +G + C + L G L C S + Q P T KC
Sbjct: 687 NSNFYQSSKQKDNSGLTGVECYPCDKSC--LKCKGPLETDCLSCPKNQTLLP--TLSKCS 742
Query: 197 RCDVNHY-DFGEAGCKSCE--CNPAGSVKNTPNCDSVKG 232
C+ ++ + C C C KN C G
Sbjct: 743 ICEEEYFFNITTNNCDQCHKTCLTCTG-KNKNECIDCNG 780
>WB|WBGene00006787 [details] [associations]
symbol:unc-52 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IGI;IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0061199 "striated muscle contraction involved in
embryonic body morphogenesis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IGI] [GO:0016477 "cell
migration" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0040017
"positive regulation of locomotion" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 165 (63.1 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 50/166 (30%), Positives = 70/166 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFC--- 54
C CNG +++C DKE Y G+CLDCQ + +G CE+C+ + ++ N C
Sbjct: 955 CECNGHASQC--DKE-Y------GYCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPE 1005
Query: 55 ---TACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG----CKSCEC 106
C+CN C+S GRC C+ G C+RC +Y G C C C
Sbjct: 1006 ATRAPCHCNNHSPRG--CDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPC 1063
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
P S N V C +GR+ E ++ PAG
Sbjct: 1064 -PGASDCYLDNEGQVA--CRICPAGLQGRLCNECAPGYTRSNKPAG 1106
Score = 143 (55.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 56/213 (26%), Positives = 86/213 (40%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRC-QCKPG 80
C+ C G +CE C Y + G + C C CN S QC+ E G C C+
Sbjct: 922 CI-CPPGYVGTSCEDCAPGYSRTGGGLYLGLCEKCECNGHAS---QCDKEYGYCLDCQHN 977
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV------KNTPN-CDSVKGQCESAQLSSR 133
GD+C+RC G + +C P + ++P CDS G+C + ++
Sbjct: 978 TEGDQCERCKPGFVGDARRGTPN-DCQPEATRAPCHCNNHSPRGCDSF-GRCLLCEHNTE 1035
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR--CQ-CKPGV 190
G H E R + D +D C P G+ + ++EG+ C+ C G+
Sbjct: 1036 G-THCE-RCKKGYYGDATKGSPYDCTPCP---CP----GASDCYLDNEGQVACRICPAGL 1086
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
G C+ C + + + CE P G V N
Sbjct: 1087 QGRLCNECAPGYTRSNKPAGRVCE--PIGQVTN 1117
Score = 120 (47.3 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
Identities = 51/184 (27%), Positives = 70/184 (38%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA---G-CKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+C C PG G C+ C + G G C+ CECN S CD G C Q
Sbjct: 921 QCICPPGYVGTSCEDCAPGYSRTGGGLYLGLCEKCECNGHAS-----QCDKEYGYCLDCQ 975
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD-TYPLGHGGSLNLQ-CNSEGRCQ-C 186
++ G E + + F R C+ + T H + + + C+S GRC C
Sbjct: 976 HNTEGD-QCE---RCKPGFVGDARR-GTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLC 1030
Query: 187 KPGVTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+ G C+RC +Y G C C C P S N +GQ C+ G
Sbjct: 1031 EHNTEGTHCERCKKGYYGDATKGSPYDCTPCPC-PGASDCYLDN----EGQVACRICPAG 1085
Query: 243 AQCR 246
Q R
Sbjct: 1086 LQGR 1089
Score = 95 (38.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
+C+ G++ N+ G C+CK VTG CD+C + E GC C C
Sbjct: 383 SCDTRGAVTPYPNNYGTCECKSQVTGPNCDQCKPGAFHLSEKSPEGCLKCFC 434
Score = 90 (36.7 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 216
++G+CQCK V G CDRC N + GC C C+
Sbjct: 685 AQGQCQCKASVIGPNCDRCAPNSFGLAPTNPQGCIPCFCS 724
Score = 78 (32.5 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 21/72 (29%), Positives = 29/72 (40%)
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEA---G-C-----KSCECNPAGSVKNTPNCDSVKGQ 233
+C C PG G C+ C + G G C + +C P P +GQ
Sbjct: 633 QCVCPPGYLGTSCEDCAPGYERSGYGPYLGTCVPIQPRHQQCGPGAVAPTAP----AQGQ 688
Query: 234 CECKDNVEGAQC 245
C+CK +V G C
Sbjct: 689 CQCKASVIGPNC 700
Score = 75 (31.5 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
G C +C+ GPNC++C+ + +KS + C C C G N C S G + K
Sbjct: 398 GTC-ECKSQVTGPNCDQCKPGAFHLSEKSPEG-CLKCFC--FGVSN-DCRSSGHYRTK 450
Score = 67 (28.6 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSLNLQCNS 71
G C C+ GPNC++C N + + N C C C+ + QC++
Sbjct: 687 GQC-QCKASVIGPNCDRCAPNSFGLAPTNPQGCIPCFCSGVTQ---QCSA 732
Score = 50 (22.7 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 74 RCQCKPGVTGDKCDRC 89
+C C PG G C+ C
Sbjct: 633 QCVCPPGYLGTSCEDC 648
Score = 41 (19.5 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 223 NTPNCDSVKG-QCECKDNVEGAQCR 246
N N ++ G CEC + G C+
Sbjct: 2724 NCRNANNHHGFSCECAEEFHGEYCQ 2748
Score = 41 (19.5 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 179 NSEG-RCQCKPGVTGDKCD 196
N E +C C G TG +C+
Sbjct: 2767 NEESWQCVCPLGTTGLRCE 2785
Score = 36 (17.7 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 234 CECKDNVEGAQC 245
CECK +G C
Sbjct: 3162 CECKLYYDGPTC 3173
Score = 36 (17.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 17/61 (27%), Positives = 21/61 (34%)
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPA--GSVKNTPNCDSVKGQCE---CKDNVEGAQ 244
+ G C + NH+ F SCEC G + C C DN E Q
Sbjct: 2720 LNGANCRNAN-NHHGF------SCECAEEFHGEYCQWRSNSCHDESCNTGICLDNEESWQ 2772
Query: 245 C 245
C
Sbjct: 2773 C 2773
>UNIPROTKB|Q06561 [details] [associations]
symbol:unc-52 "Basement membrane proteoglycan" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030239 "myofibril assembly" evidence=IEP]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 165 (63.1 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 50/166 (30%), Positives = 70/166 (42%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFC--- 54
C CNG +++C DKE Y G+CLDCQ + +G CE+C+ + ++ N C
Sbjct: 955 CECNGHASQC--DKE-Y------GYCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPE 1005
Query: 55 ---TACNCNPIGSLNLQCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAG----CKSCEC 106
C+CN C+S GRC C+ G C+RC +Y G C C C
Sbjct: 1006 ATRAPCHCNNHSPRG--CDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPC 1063
Query: 107 NPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAG 152
P S N V C +GR+ E ++ PAG
Sbjct: 1064 -PGASDCYLDNEGQVA--CRICPAGLQGRLCNECAPGYTRSNKPAG 1106
Score = 143 (55.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 56/213 (26%), Positives = 86/213 (40%)
Query: 26 CLDCQGDRDGPNCEKCRDNYYQKSGDNF---CTACNCNPIGSLNLQCNSE-GRC-QCKPG 80
C+ C G +CE C Y + G + C C CN S QC+ E G C C+
Sbjct: 922 CI-CPPGYVGTSCEDCAPGYSRTGGGLYLGLCEKCECNGHAS---QCDKEYGYCLDCQHN 977
Query: 81 VTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV------KNTPN-CDSVKGQCESAQLSSR 133
GD+C+RC G + +C P + ++P CDS G+C + ++
Sbjct: 978 TEGDQCERCKPGFVGDARRGTPN-DCQPEATRAPCHCNNHSPRGCDSF-GRCLLCEHNTE 1035
Query: 134 GRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR--CQ-CKPGV 190
G H E R + D +D C P G+ + ++EG+ C+ C G+
Sbjct: 1036 G-THCE-RCKKGYYGDATKGSPYDCTPCP---CP----GASDCYLDNEGQVACRICPAGL 1086
Query: 191 TGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
G C+ C + + + CE P G V N
Sbjct: 1087 QGRLCNECAPGYTRSNKPAGRVCE--PIGQVTN 1117
Score = 120 (47.3 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
Identities = 51/184 (27%), Positives = 70/184 (38%)
Query: 74 RCQCKPGVTGDKCDRCDVNHYDFGEA---G-CKSCECNPAGSVKNTPNCDSVKGQCESAQ 129
+C C PG G C+ C + G G C+ CECN S CD G C Q
Sbjct: 921 QCICPPGYVGTSCEDCAPGYSRTGGGLYLGLCEKCECNGHAS-----QCDKEYGYCLDCQ 975
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRD-TYPLGHGGSLNLQ-CNSEGRCQ-C 186
++ G E + + F R C+ + T H + + + C+S GRC C
Sbjct: 976 HNTEGD-QCE---RCKPGFVGDARR-GTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLC 1030
Query: 187 KPGVTGDKCDRCDVNHYDFGEAG----CKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
+ G C+RC +Y G C C C P S N +GQ C+ G
Sbjct: 1031 EHNTEGTHCERCKKGYYGDATKGSPYDCTPCPC-PGASDCYLDN----EGQVACRICPAG 1085
Query: 243 AQCR 246
Q R
Sbjct: 1086 LQGR 1089
Score = 95 (38.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCEC 106
+C+ G++ N+ G C+CK VTG CD+C + E GC C C
Sbjct: 383 SCDTRGAVTPYPNNYGTCECKSQVTGPNCDQCKPGAFHLSEKSPEGCLKCFC 434
Score = 90 (36.7 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 180 SEGRCQCKPGVTGDKCDRCDVNHYDFGEA---GCKSCECN 216
++G+CQCK V G CDRC N + GC C C+
Sbjct: 685 AQGQCQCKASVIGPNCDRCAPNSFGLAPTNPQGCIPCFCS 724
Score = 78 (32.5 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 21/72 (29%), Positives = 29/72 (40%)
Query: 183 RCQCKPGVTGDKCDRCDVNHYDFGEA---G-C-----KSCECNPAGSVKNTPNCDSVKGQ 233
+C C PG G C+ C + G G C + +C P P +GQ
Sbjct: 633 QCVCPPGYLGTSCEDCAPGYERSGYGPYLGTCVPIQPRHQQCGPGAVAPTAP----AQGQ 688
Query: 234 CECKDNVEGAQC 245
C+CK +V G C
Sbjct: 689 CQCKASVIGPNC 700
Score = 75 (31.5 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYY---QKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
G C +C+ GPNC++C+ + +KS + C C C G N C S G + K
Sbjct: 398 GTC-ECKSQVTGPNCDQCKPGAFHLSEKSPEG-CLKCFC--FGVSN-DCRSSGHYRTK 450
Score = 67 (28.6 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDN--FCTACNCNPIGSLNLQCNS 71
G C C+ GPNC++C N + + N C C C+ + QC++
Sbjct: 687 GQC-QCKASVIGPNCDRCAPNSFGLAPTNPQGCIPCFCSGVTQ---QCSA 732
Score = 50 (22.7 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 74 RCQCKPGVTGDKCDRC 89
+C C PG G C+ C
Sbjct: 633 QCVCPPGYLGTSCEDC 648
Score = 41 (19.5 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 223 NTPNCDSVKG-QCECKDNVEGAQCR 246
N N ++ G CEC + G C+
Sbjct: 2724 NCRNANNHHGFSCECAEEFHGEYCQ 2748
Score = 41 (19.5 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 179 NSEG-RCQCKPGVTGDKCD 196
N E +C C G TG +C+
Sbjct: 2767 NEESWQCVCPLGTTGLRCE 2785
Score = 36 (17.7 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 234 CECKDNVEGAQC 245
CECK +G C
Sbjct: 3162 CECKLYYDGPTC 3173
Score = 36 (17.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 17/61 (27%), Positives = 21/61 (34%)
Query: 190 VTGDKCDRCDVNHYDFGEAGCKSCECNPA--GSVKNTPNCDSVKGQCE---CKDNVEGAQ 244
+ G C + NH+ F SCEC G + C C DN E Q
Sbjct: 2720 LNGANCRNAN-NHHGF------SCECAEEFHGEYCQWRSNSCHDESCNTGICLDNEESWQ 2772
Query: 245 C 245
C
Sbjct: 2773 C 2773
>UNIPROTKB|F1MRZ6 [details] [associations]
symbol:TNC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060739 "mesenchymal-epithelial cell signaling
involved in prostate gland development" evidence=IEA] [GO:0045545
"syndecan binding" evidence=IEA] [GO:0014012 "peripheral nervous
system axon regeneration" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005614 "interstitial
matrix" evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0008284 GO:GO:0007528 SUPFAM:SSF49265 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0010628 GO:GO:0005604
GO:GO:0060740 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS51406 GO:GO:0014012 GO:GO:0005614
InterPro:IPR013111 Pfam:PF07974 Pfam:PF12661 OMA:GQRSCPN
GO:GO:0060739 GeneTree:ENSGT00690000102056 EMBL:DAAA02024590
EMBL:DAAA02024591 EMBL:DAAA02024592 EMBL:DAAA02024593
IPI:IPI00694504 Ensembl:ENSBTAT00000000752 ArrayExpress:F1MRZ6
Uniprot:F1MRZ6
Length = 2231
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 69/252 (27%), Positives = 95/252 (37%)
Query: 24 GHCLDCQGDRDGPNCEK--CRDNYYQKSG--DNFC------TACNCNPIGSLNLQCNSEG 73
G C+ CQ G +C + C N + + +N C T +C + N C G
Sbjct: 296 GRCV-CQEGFAGEDCREPLCLHNCHGRGRCVENECVCDEGFTGDDCGELVCPN-DCFDRG 353
Query: 74 RC-----QCKPGVTGDKCDRCDVNHYDFGEAGCKS--CECNPAGSVKNTPNCDSVKGQCE 126
RC C G TG+ C + H G C C C+ + P+C + +C
Sbjct: 354 RCLNGTCSCDEGFTGEDCGQLACPHACHGHGRCDEGQCVCDEGFA---GPDCS--ERRCP 408
Query: 127 SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQC 186
S RGR + R + F G +L+ C RD GHG +N G+C C
Sbjct: 409 S-DCHERGRC-VDGRCECNDGF--TGADCGELQ-CPRDCS--GHGRCVN------GQCVC 455
Query: 187 KPGVTGDKCD--RCDVNHYDFGEAGCKSCECNPA------GSVKNTPNCDS----VKGQC 234
G TG+ C RC + + G CEC P G + +C V G C
Sbjct: 456 DEGYTGEDCGQRRCPSDCHGRGRCVDGRCECQPGFQGDDCGEMSCPHDCHQHGRCVNGMC 515
Query: 235 ECKDNVEGAQCR 246
C D G CR
Sbjct: 516 VCDDAYTGEDCR 527
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 52/187 (27%), Positives = 75/187 (40%)
Query: 72 EGRCQCKPGVTGDKCDRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
+GRC+C+PG GD C H D + G C + C +C ++ C
Sbjct: 481 DGRCECQPGFQGDDCGEMSCPH-DCHQHGRCVNGMC-VCDDAYTGEDCRELR--CPG-DC 535
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGV 190
S RGR + R F AG DL C + + G G +C +G+C C G
Sbjct: 536 SQRGRC-VDGRCVCEDGF--AGPDCADLA-CPGNCH--GRG-----RC-VDGQCVCLEGF 583
Query: 191 TGDKCD--RCDVNHYDFGEAGCKSCECN-----PAGSVKNTPN-CDS----VKGQCECKD 238
TG C RC + + G C C+ P + ++ PN C + V G+C C +
Sbjct: 584 TGPDCAQRRCPGDCHGQGRCVDGQCVCHEGFTGPDCAQRSCPNDCSNWGQCVSGRCVCNE 643
Query: 239 NVEGAQC 245
G C
Sbjct: 644 GYTGEDC 650
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 75/281 (26%), Positives = 108/281 (38%)
Query: 1 CNCN-GFSNR-CFFDKELYNRTGHGGHCLD----CQGDRDGPNCEK--CRDNYYQKSGDN 52
C C GF+ C L+N G G C++ C G +C + C ++ + + G
Sbjct: 298 CVCQEGFAGEDCREPLCLHNCHGRG-RCVENECVCDEGFTGDDCGELVCPNDCFDR-GRC 355
Query: 53 FCTACNCNPIGSLNLQCNSEGRCQCKPGVTGD-KCDR----CDVNHY--DFGEAGCKSCE 105
C+C+ G C G+ C G +CD CD D E C S +
Sbjct: 356 LNGTCSCDE-GFTGEDC---GQLACPHACHGHGRCDEGQCVCDEGFAGPDCSERRCPS-D 410
Query: 106 CNPAGS-VKNTPNC-DSVKG-QCESAQL----SSRGR-VHTELRVQSRKNFDPAGNRIWD 157
C+ G V C D G C Q S GR V+ + + G R
Sbjct: 411 CHERGRCVDGRCECNDGFTGADCGELQCPRDCSGHGRCVNGQCVCDEGYTGEDCGQR--- 467
Query: 158 LRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAG-CKS--CE 214
RC D + G G +C +GRC+C+PG GD C H D + G C + C
Sbjct: 468 --RCPSDCH--GRG-----RC-VDGRCECQPGFQGDDCGEMSCPH-DCHQHGRCVNGMCV 516
Query: 215 CNPAGSVKNT-----P-NCDS----VKGQCECKDNVEGAQC 245
C+ A + ++ P +C V G+C C+D G C
Sbjct: 517 CDDAYTGEDCRELRCPGDCSQRGRCVDGRCVCEDGFAGPDC 557
>UNIPROTKB|F1MAP4 [details] [associations]
symbol:Megf10 "Protein Megf10" species:10116 "Rattus
norvegicus" [GO:0001891 "phagocytic cup" evidence=IEA] [GO:0014719
"satellite cell activation" evidence=IEA] [GO:0014816 "satellite
cell differentiation" evidence=IEA] [GO:0014841 "satellite cell
proliferation" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 RGD:735084
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147 CTD:84466
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AC095558
IPI:IPI00371424 RefSeq:NP_001094127.1 UniGene:Rn.224926
Ensembl:ENSRNOT00000037901 GeneID:291445 KEGG:rno:291445
NextBio:632612 Uniprot:F1MAP4
Length = 1145
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 65/249 (26%), Positives = 90/249 (36%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C C G C + C + + G N C C+ G+ + + G+C C PG T
Sbjct: 251 GEC-SCPSGWMGTVCGQPCPEGRF---GKNCSQECQCHNGGACDA---ATGQCHCSPGYT 303
Query: 83 GDKC-DRCDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDS-VKGQ-CESAQLSSRGR--V 136
G++C D C V Y A C+ V T C++ G+ CE A+L G +
Sbjct: 304 GERCQDECPVGTYGVRCAETCRCVNGGKCYHVSGTCLCEAGFSGEFCE-ARLCPEGLYGI 362
Query: 137 HTELR----VQSRKNFDPAGNRI-----WDLRRCKRDTYPLGHGGSLNLQCNSE------ 181
+ R + + + P W C P +G + C+ +
Sbjct: 363 KCDKRCPCHLDNTHSCHPMSGECGCKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCD 422
Query: 182 ---GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCEC 236
GRC C PG G C C + Y C S C C KN C V G C C
Sbjct: 423 SVSGRCACAPGFKGTDCSTPCPLGRYGIN---CSSRCGC------KNDAVCSPVDGSCIC 473
Query: 237 KDNVEGAQC 245
K G C
Sbjct: 474 KAGWHGVDC 482
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 72/257 (28%), Positives = 98/257 (38%)
Query: 9 RCFFDKELYNRTGHGG-HCLD-CQGDRDGPNCEKCRDNYYQKSGDNFCT-ACNCNPIGSL 65
RC G GG +C C GD GP+C R ++ N T AC+C G
Sbjct: 117 RCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSS-RCQCKNRALCNPITGACHC-AAGYR 174
Query: 66 NLQCNSEGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVK- 122
+C E RC+ G G+ C RC + + C C+P + + C K
Sbjct: 175 GWRC--EDRCE--QGTYGNDCHQRCQCQNGATCDHITGECRCSPGYTGAFCEDLCPPGKH 230
Query: 123 G-QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG---SLNLQC 178
G QCE G V + + P+G W C + P G G S QC
Sbjct: 231 GPQCEQRCPCQNGGVCHHVTGECSC---PSG---WMGTVCGQPC-PEGRFGKNCSQECQC 283
Query: 179 NS-------EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV 230
++ G+C C PG TG++C D C V Y G ++C C G C V
Sbjct: 284 HNGGACDAATGQCHCSPGYTGERCQDECPVGTY--GVRCAETCRCVNGGK------CYHV 335
Query: 231 KGQCECKDNVEGAQCRS 247
G C C+ G C +
Sbjct: 336 SGTCLCEAGFSGEFCEA 352
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 75/268 (27%), Positives = 106/268 (39%)
Query: 1 CNCNGFSNRCFFDKELYNRTGH-GGHCLD-CQGDRDGPNCEK---CRDN--YYQKSGDNF 53
C C + E G+ G C D C + GP CE+ C++ + +G+
Sbjct: 195 CQCQNGATCDHITGECRCSPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECS 254
Query: 54 C------TACN--CNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSC 104
C T C C P G C+ E CQC G D +C + GE C+
Sbjct: 255 CPSGWMGTVCGQPC-PEGRFGKNCSQE--CQCHNGGACDAATGQCHCSPGYTGER-CQD- 309
Query: 105 ECNPAGS--VKNTPNCDSVKG-QCE--SAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR 159
EC P G+ V+ C V G +C S E ++R P G ++ ++
Sbjct: 310 EC-PVGTYGVRCAETCRCVNGGKCYHVSGTCLCEAGFSGEF-CEAR--LCPEG--LYGIK 363
Query: 160 RCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNP 217
KR L + S C+ G C CKPG +G C+ C Y GEA + C C
Sbjct: 364 CDKRCPCHLDNTHS----CHPMSGECGCKPGWSGLYCNETCSPGFY--GEACQQICSC-- 415
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+N +CDSV G+C C +G C
Sbjct: 416 ----QNGADCDSVSGRCACAPGFKGTDC 439
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 61/249 (24%), Positives = 92/249 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C +C G C++ C +Y C C + G + + G C C PG T
Sbjct: 598 GIC-ECAPGFRGTTCQRICSPGFYGHRCSQTCPQC-VHSSGPCH---HITGLCDCLPGFT 652
Query: 83 GDKCDR-CDVNHYDFGEAG-C------------KSCECNPA--GSVKNTPNCDSVKG-QC 125
G C+ C + AG C +SC+C P GS + P + G C
Sbjct: 653 GALCNEVCPSGRFGKNCAGVCTCTNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAHWGPNC 712
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS----- 180
G + + + P ++ +RC Y G +L QC +
Sbjct: 713 IHTCNCHNGAFCSAYDGECKCT--PGWTGLYCTQRCPLGFY--GKDCALVCQCQNGADCD 768
Query: 181 --EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCEC 236
G+C C+ G G C+ +C Y +G C+ C+C N CD + G C C
Sbjct: 769 HISGQCTCRTGFMGRHCEQKCPAGTYGYG---CRQICDC------LNNSTCDHITGTCYC 819
Query: 237 KDNVEGAQC 245
+GA+C
Sbjct: 820 SPGWKGARC 828
Score = 125 (49.1 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 63/246 (25%), Positives = 87/246 (35%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C C+ G C E C +Y ++ C+ N G+ C+S GRC C PG
Sbjct: 383 GEC-GCKPGWSGLYCNETCSPGFYGEACQQICSCQN----GA---DCDSVSGRCACAPGF 434
Query: 82 TGDKCDR-CDVNHYDFG---EAGCKS-CECNPA-GSVKNTPNCDSVKGQ--CESAQLSSR 133
G C C + Y GCK+ C+P GS V C S
Sbjct: 435 KGTDCSTPCPLGRYGINCSSRCGCKNDAVCSPVDGSCICKAGWHGVDCSISCPSGTWGFG 494
Query: 134 GRVHTE-LRVQSRKNFDPAGNRI--WDLRRCK---RD-TYPLGHGGSLNLQ----CN-SE 181
+ + L + D W +C+ +D TY L + C+ +
Sbjct: 495 CNLTCQCLNGGACNTLDGTCTCAPGWRGEKCEFPCQDGTYGLNCAERCDCSHADGCHPTT 554
Query: 182 GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C+C PG +G CD C + G C C KN +C G CEC
Sbjct: 555 GHCRCLPGWSGVHCDSVCAEGRW--GPNCSLPCYC------KNGASCSPDDGICECAPGF 606
Query: 241 EGAQCR 246
G C+
Sbjct: 607 RGTTCQ 612
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 71/270 (26%), Positives = 95/270 (35%)
Query: 1 CNC-NGFSNRCFF-DKELYNRTGHGGHCLD---CQGDRDGPNCEK---CR-DNYYQKSGD 51
C C NG +C+ G G + C G C+K C DN + S
Sbjct: 324 CRCVNG--GKCYHVSGTCLCEAGFSGEFCEARLCPEGLYGIKCDKRCPCHLDNTH--SCH 379
Query: 52 NFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPA- 109
C C P G L CN C PG G+ C + C + ++ C C P
Sbjct: 380 PMSGECGCKP-GWSGLYCNET----CSPGFYGEACQQICSCQNGADCDSVSGRCACAPGF 434
Query: 110 -GSVKNTPNCDSVK-G-QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLR-RCKRDT 165
G+ +TP C + G C S V + + AG D C T
Sbjct: 435 KGTDCSTP-CPLGRYGINCSSRCGCKNDAVCSPV---DGSCICKAGWHGVDCSISCPSGT 490
Query: 166 YPLGHGGSLNLQC------NS-EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNP 217
+ G G +L QC N+ +G C C PG G+KC+ C Y A + C+C+
Sbjct: 491 W--GFGCNLTCQCLNGGACNTLDGTCTCAPGWRGEKCEFPCQDGTYGLNCA--ERCDCSH 546
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
A C G C C G C S
Sbjct: 547 ADG------CHPTTGHCRCLPGWSGVHCDS 570
>UNIPROTKB|Q5VY43 [details] [associations]
symbol:PEAR1 "Platelet endothelial aggregation receptor 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0043654 "recognition of apoptotic cell" evidence=IEA]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 EMBL:AL356104 HOGENOM:HOG000294130
Pfam:PF12661 GO:GO:0043654 EMBL:AL158169 HOVERGEN:HBG108333
EMBL:AK074121 IPI:IPI00154858 RefSeq:NP_001073940.1
UniGene:Hs.142003 HSSP:P01133 ProteinModelPortal:Q5VY43 SMR:Q5VY43
IntAct:Q5VY43 STRING:Q5VY43 PhosphoSite:Q5VY43 DMDM:74757035
PRIDE:Q5VY43 DNASU:375033 Ensembl:ENST00000292357
Ensembl:ENST00000338302 GeneID:375033 KEGG:hsa:375033
UCSC:uc001fqj.1 CTD:375033 GeneCards:GC01P156865 H-InvDB:HIX0001178
HGNC:HGNC:33631 HPA:HPA035217 MIM:610278 neXtProt:NX_Q5VY43
PharmGKB:PA162399233 eggNOG:NOG320509 InParanoid:Q5VY43 OMA:PPGTWGF
OrthoDB:EOG451DPW GenomeRNAi:375033 NextBio:100378
ArrayExpress:Q5VY43 Bgee:Q5VY43 CleanEx:HS_PEAR1
Genevestigator:Q5VY43 Uniprot:Q5VY43
Length = 1037
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 74/251 (29%), Positives = 92/251 (36%)
Query: 24 GHCLDCQGDRDGPNCEK--CRDNYYQKSGDNFCTA-CNCNPIGSLNLQCNS-EGRCQCKP 79
G CL C+ G C C D +Y S C A C C+ SL+ C+ G C C P
Sbjct: 332 GACL-CEHGFTGDRCTDRLCPDGFYGLS----CQAPCTCDREHSLS--CHPMNGECSCLP 384
Query: 80 GVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPN-CDSVKG----QCESAQLSS 132
G G C+ C D GC+ C C G + T C G C S
Sbjct: 385 GWAGLHCNESCP---QDTHGPGCQEHCLCLHGGVCQATSGLCQCAPGYTGPHCASLCPPD 441
Query: 133 RGRVHTELRVQSRKNF--DPA-GNRI----WDLRRCKRDTYPLGHGGSLNL--QCNSE-- 181
V+ R P G + W C P G S N QC E
Sbjct: 442 TYGVNCSARCSCENAIACSPIDGECVCKEGWQRGNCSVPCPPGTWGFSCNASCQCAHEAV 501
Query: 182 -----GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQC 234
G C C PG G C C FGE GC S C+C+ ++ CD V G+C
Sbjct: 502 CSPQTGACTCTPGWHGAHCQLPCPKGQ--FGE-GCASRCDCD------HSDGCDPVHGRC 552
Query: 235 ECKDNVEGAQC 245
+C+ GA+C
Sbjct: 553 QCQAGWMGARC 563
Score = 144 (55.7 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 67/245 (27%), Positives = 89/245 (36%)
Query: 23 GGHCL-DCQGDRDGPNCEK---CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
G C +C GP C+K C +N S D C+C P G C C
Sbjct: 128 GDDCSSECAPGMWGPQCDKPCSCGNN---SSCDPKSGVCSC-PSGLQPPNCLQP----CT 179
Query: 79 PGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ------CESAQLS 131
PG G C RC H + +C C PA + P+CD Q C S
Sbjct: 180 PGYYGPACQFRCQC-HGAPCDPQTGACFC-PAE--RTGPSCDVSCSQGTSGFFCPSTHSC 235
Query: 132 SRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG-HGGSLNLQCNSE--------- 181
G V + P G W C P G HG + + +C
Sbjct: 236 QNGGV---FQTPQGSCSCPPG---WMGTICSLPC-PEGFHGPNCSQECRCHNGGLCDRFT 288
Query: 182 GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G+C+C PG TGD+C + C V FG+ ++C+C P C G C C+
Sbjct: 289 GQCRCAPGYTGDRCREECPVGR--FGQDCAETCDCAPDA------RCFPANGACLCEHGF 340
Query: 241 EGAQC 245
G +C
Sbjct: 341 TGDRC 345
Score = 134 (52.2 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 67/271 (24%), Positives = 97/271 (35%)
Query: 2 NCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCN 60
+CN S +C + +TG C C G +C+ C + G+ + C+C+
Sbjct: 489 SCNA-SCQCAHEAVCSPQTGA---CT-CTPGWHGAHCQLPCPKGQF---GEGCASRCDCD 540
Query: 61 PIGSLNLQCNS-EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGS-VKNTPN 117
C+ GRCQC+ G G +C C + G +C C G+ + N
Sbjct: 541 HSDG----CDPVHGRCQCQAGWMGARCHLSCPEGLW--GVNCSNTCTCKNGGTCLPENGN 594
Query: 118 CDSVKG----QCE-SAQLSSRGRVHTELRVQSRKNFDPAGNRI-----WDLRRCKRDTYP 167
C G C+ S Q G+ + + P+ W C + P
Sbjct: 595 CVCAPGFRGPSCQRSCQPGRYGKRCVPCKCANHSFCHPSNGTCYCLAGWTGPDCSQPCPP 654
Query: 168 LGHGG---SLNLQCN-------SEGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKS-CEC 215
GH G + QC+ +G C C G TG C + C + FG A C C+C
Sbjct: 655 -GHWGENCAQTCQCHHGGTCHPQDGSCICPLGWTGHHCLEGCPLG--TFG-ANCSQPCQC 710
Query: 216 NPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
P C G C C GA CR
Sbjct: 711 GPG------EKCHPETGACVCPPGHSGAPCR 735
Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
Identities = 57/205 (27%), Positives = 73/205 (35%)
Query: 57 CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNT 115
C C P G C+SE C PG+ G +CD+ C + + C C P+G
Sbjct: 120 CQCVP-GWRGDDCSSE----CAPGMWGPQCDKPCSCGNNSSCDPKSGVCSC-PSGL--QP 171
Query: 116 PNC--DSVKGQCESAQLSSRGRVH-TELRVQSRKNFDPAGNR--IWDLRRCKRDTY---- 166
PNC G A R + H Q+ F PA D+ C + T
Sbjct: 172 PNCLQPCTPGYYGPA-CQFRCQCHGAPCDPQTGACFCPAERTGPSCDVS-CSQGTSGFFC 229
Query: 167 PLGH----GGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSV 221
P H GG +G C C PG G C C + G + C C+ G
Sbjct: 230 PSTHSCQNGGVFQ---TPQGSCSCPPGWMGTICSLPCPEGFH--GPNCSQECRCHNGGL- 283
Query: 222 KNTPNCDSVKGQCECKDNVEGAQCR 246
CD GQC C G +CR
Sbjct: 284 -----CDRFTGQCRCAPGYTGDRCR 303
>UNIPROTKB|A0JM12 [details] [associations]
symbol:megf10 "Multiple epidermal growth factor-like
domains protein 10" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014816
"satellite cell differentiation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0016021 GO:GO:0005886 GO:GO:0007155 GO:GO:0006909
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030239 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 CTD:84466
HOVERGEN:HBG108333 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:BC125696 RefSeq:NP_001072726.1 UniGene:Str.46279
ProteinModelPortal:A0JM12 Ensembl:ENSXETT00000034579 GeneID:780183
KEGG:xtr:780183 Xenbase:XB-GENE-491974 Bgee:A0JM12 Uniprot:A0JM12
Length = 1114
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 64/248 (25%), Positives = 92/248 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
G+C C G +C+ C ++ G N +C+C S C+ +G C+C PG
Sbjct: 554 GYCR-CLAGWAGMHCDSVCPGGHW---GPNCSLSCDCKNGAS----CSPDDGICECAPGY 605
Query: 82 TGDKCDR-CDVNHYDFG-EAGCKSCECNPAGSVKNTPNCDSVKG----QCESAQLSSR-G 134
G C R C Y C C + T CD + G C S R G
Sbjct: 606 RGTTCQRICSPGFYGHRCSQACPQCVHSNGPCHHVTGQCDCLAGFMGSLCNEVCPSGRYG 665
Query: 135 RVHTEL-RVQSRKNFDPAGNRI-----WDLRRCKRDTYPLGHGGSLNLQ-CNS------- 180
+ + + +P W C + P GH G + CN
Sbjct: 666 KNCAGVCACTNNGTCNPIDGTCQCYPGWIGNDCSQ-ACPPGHWGPNCIHTCNCHNGAYCS 724
Query: 181 --EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+G C+C PG TG C RC + +Y G+ C+C +N +CD + GQC C+
Sbjct: 725 AYDGECKCSPGWTGLYCTQRCPLGYY--GKECTLVCQC------QNGADCDHITGQCTCR 776
Query: 238 DNVEGAQC 245
G C
Sbjct: 777 TGFMGKFC 784
Score = 155 (59.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 69/263 (26%), Positives = 96/263 (36%)
Query: 13 DKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS- 71
DK ++ R C C+ GPNC D G + + C C G+L CN
Sbjct: 110 DKCVHGRCIAPNTC-QCEPGWGGPNCSSACD--VDHWGPHCSSRCQCKN-GAL---CNPI 162
Query: 72 EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKN-TPNCDSVKGQ----C 125
G C C G G +C+ RCD Y G + C+C S + T C G C
Sbjct: 163 TGACHCSSGYKGWRCEERCDQGTY--GNDCQQKCQCQNGASCDHVTGECRCPPGYTGAFC 220
Query: 126 ESAQLSSRGRVHTELRVQSRKN----------FDPAGNRIWDLRRCKRDTYPLGHGG--- 172
E + E R + PAG W C + P G G
Sbjct: 221 EDLCPPGKHGSQCEERCPCQNGGVCHHVTGECSCPAG---WMGTVCGQPC-PEGRYGRNC 276
Query: 173 SLNLQCNS-------EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNT 224
S QC++ G+C C PG G++C + C V Y G ++C+C G
Sbjct: 277 SQECQCHNGGTCDSATGQCYCSPGYNGERCQEECPVGLY--GVKCAQTCQCLNGGK---- 330
Query: 225 PNCDSVKGQCECKDNVEGAQCRS 247
C + G C C+ G +C +
Sbjct: 331 --CYHISGACLCEPGYTGERCET 351
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 64/260 (24%), Positives = 105/260 (40%)
Query: 3 CNGFSNRCFFDKELYNRTGHGG-HCLD-CQGDRDGPNCE-KCRDNYYQKSGDNFCTACNC 59
CN + C + +G+ G C + C G +C+ KC+ S D+ C C
Sbjct: 159 CNPITGAC------HCSSGYKGWRCEERCDQGTYGNDCQQKCQCQN-GASCDHVTGECRC 211
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCD-----VNHYDFGEAGCKS----CECN-P 108
P G C C PG G +C+ RC V H+ GE C + C P
Sbjct: 212 PP-GYTGAFCED----LCPPGKHGSQCEERCPCQNGGVCHHVTGECSCPAGWMGTVCGQP 266
Query: 109 AGSVKNTPNCDSVKGQCESAQL--SSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY 166
+ NC S + QC + S+ G+ + + + ++ ++ C +
Sbjct: 267 CPEGRYGRNC-SQECQCHNGGTCDSATGQCYCSPGYNGERCQEECPVGLYGVK-CAQTCQ 324
Query: 167 PLGHGGSLNLQC-NSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTP 225
L +GG +C + G C C+PG TG++C+ + +G K C C+ ++ T
Sbjct: 325 CL-NGG----KCYHISGACLCEPGYTGERCETPLCSEGTYGMKCDKKCPCH----LQYTQ 375
Query: 226 NCDSVKGQCECKDNVEGAQC 245
+C + G+C CK G C
Sbjct: 376 SCHPMSGECACKPGRSGLYC 395
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 64/253 (25%), Positives = 93/253 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C +C G C++ C +Y C C + S N C+ G+C C G
Sbjct: 597 GIC-ECAPGYRGTTCQRICSPGFYGHRCSQACPQC----VHS-NGPCHHVTGQCDCLAGF 650
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCE----CNPA-GSVKNTPNCDSVKGQCESAQLSSR-G 134
G C+ C Y AG +C CNP G+ + P + C A G
Sbjct: 651 MGSLCNEVCPSGRYGKNCAGVCACTNNGTCNPIDGTCQCYPGW--IGNDCSQACPPGHWG 708
Query: 135 R--VHTE--------LRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG---SLNLQCNS- 180
+HT P ++ +RC PLG+ G +L QC +
Sbjct: 709 PNCIHTCNCHNGAYCSAYDGECKCSPGWTGLYCTQRC-----PLGYYGKECTLVCQCQNG 763
Query: 181 ------EGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKG 232
G+C C+ G G C+ +C Y +G C+ C+C N CD + G
Sbjct: 764 ADCDHITGQCTCRTGFMGKFCEQKCPSASYGYG---CRQVCDC------LNNSTCDHITG 814
Query: 233 QCECKDNVEGAQC 245
C C +GA+C
Sbjct: 815 TCYCSPGWKGARC 827
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 77/271 (28%), Positives = 107/271 (39%)
Query: 1 CNC-NGFSNRC-FFDKELYNRTGH-GGHCLD-CQGDRDGPNCEK---CRDN--YYQKSGD 51
C C NG S C E G+ G C D C + G CE+ C++ + +G+
Sbjct: 194 CQCQNGAS--CDHVTGECRCPPGYTGAFCEDLCPPGKHGSQCEERCPCQNGGVCHHVTGE 251
Query: 52 NFC------TACN--CNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCK 102
C T C C P G C+ E CQC G T D +C + GE C+
Sbjct: 252 CSCPAGWMGTVCGQPC-PEGRYGRNCSQE--CQCHNGGTCDSATGQCYCSPGYNGER-CQ 307
Query: 103 SCECNPAG--SVKNTPNCDSVKG-QC---ESAQLSSRGRVHTELRVQSRKNFDPAGNRIW 156
EC P G VK C + G +C A L G +T R ++ +
Sbjct: 308 E-EC-PVGLYGVKCAQTCQCLNGGKCYHISGACLCEPG--YTGERCETPL----CSEGTY 359
Query: 157 DLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCE 214
++ K+ L + S C+ G C CKPG +G C+ C + Y GE + C
Sbjct: 360 GMKCDKKCPCHLQYTQS----CHPMSGECACKPGRSGLYCNETCSLGFY--GEFCQQICS 413
Query: 215 CNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
C +N +CDSV G+C C G C
Sbjct: 414 C------QNGADCDSVTGKCICAPGFTGVDC 438
>UNIPROTKB|F1NB08 [details] [associations]
symbol:SCARF1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005044 "scavenger receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0030169 "low-density lipoprotein
particle binding" evidence=IEA] [GO:0048680 "positive regulation of
axon regeneration" evidence=IEA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 GO:GO:0016021 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0030169
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
GeneTree:ENSGT00690000101691 OMA:GWWGPEC EMBL:AADN02025906
IPI:IPI00811359 Ensembl:ENSGALT00000004467 Uniprot:F1NB08
Length = 766
Score = 155 (59.6 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 75/252 (29%), Positives = 98/252 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNP--IG-------SLNLQ-CNSE 72
G C C+ GP+C++ C+ N D C+C P G S NL C E
Sbjct: 147 GACR-CEPGWWGPDCKRQCQCNLATSRCDTLTGHCHCRPGWWGRKCRFKCSCNLSPCAQE 205
Query: 73 -GRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQCESAQ 129
G C+CK G G C C+ H C C P ++ + C + G S
Sbjct: 206 TGNCKCKAGFWGSACQWHCNCVHGSCNPLN-GYCSCEPGFQGRSCQDPCPA--GTYGSQC 262
Query: 130 LSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG-GSLN-----LQ---CNS 180
+ S G F A W+ CK P HG G L Q C++
Sbjct: 263 VHSCGNCKHSQPCSPVDGFCLACQPGWNGTLCKERCTPGFHGQGCLQPCPQCRQGDICDA 322
Query: 181 E-GRC-QCKPGVTGDKCDR-CDVNHYDFGEAGCKS-C-ECNPAGSVKNTPNCDSVKGQCE 235
E G C +C+PG TG C+ C FG+ GC+ C EC GS CD V G C
Sbjct: 323 ETGSCPRCEPGWTGPSCNSSCPAG--TFGD-GCQLLCPEC-VWGS------CDPVSGDCL 372
Query: 236 CKDNVEGAQCRS 247
C+ GA C +
Sbjct: 373 CQAGYWGASCNN 384
Score = 134 (52.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 59/214 (27%), Positives = 80/214 (37%)
Query: 54 CTACNCNPIGSLNLQ--CNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPA 109
CTA C + C G C+CKPG G C C ++ G CK C C+P
Sbjct: 53 CTAALCEGEDACGPDEVCVRPGLCRCKPGFFGADCSSPCPAQYW--GH-DCKRRCPCHPG 109
Query: 110 GSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG 169
G+ C++ G+C + G EL Q R P G C+ + G
Sbjct: 110 GT------CEAESGRC-TCNPERWG----EL-CQFRCPCGPHGRCDPTTGACRCEPGWWG 157
Query: 170 HGGSLNLQCNSE--------GRCQCKPGVTGDKCD-RCDVNHYDFG-EAG-CKSCECNPA 218
QCN G C C+PG G KC +C N E G CK C+
Sbjct: 158 PDCKRQCQCNLATSRCDTLTGHCHCRPGWWGRKCRFKCSCNLSPCAQETGNCK-CKAGFW 216
Query: 219 GSVKNTP------NCDSVKGQCECKDNVEGAQCR 246
GS +C+ + G C C+ +G C+
Sbjct: 217 GSACQWHCNCVHGSCNPLNGYCSCEPGFQGRSCQ 250
Score = 123 (48.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 56/235 (23%), Positives = 86/235 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G C C+ G +C C Y+ G + C C+P G+ C +E GRC C P
Sbjct: 74 GLCR-CKPGFFGADCSSPCPAQYW---GHDCKRRCPCHPGGT----CEAESGRCTCNPER 125
Query: 82 TGDKCD-RCDVNHYDFGEAGCKSCECNPA--G-SVKNTPNCDSVKGQCES--AQLSSR-G 134
G+ C RC + + +C C P G K C+ +C++ R G
Sbjct: 126 WGELCQFRCPCGPHGRCDPTTGACRCEPGWWGPDCKRQCQCNLATSRCDTLTGHCHCRPG 185
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGD 193
+ R + N P + + CK + G + CN G C G
Sbjct: 186 WWGRKCRFKCSCNLSPCAQETGNCK-CKAGFW----GSACQWHCNCVHGSCNPLNGYCSC 240
Query: 194 KCDRCDVNHYDFGEAGCKSCEC-NPAGSVKNTPNCDSVKGQC-ECKDNVEGAQCR 246
+ + D AG +C + G+ K++ C V G C C+ G C+
Sbjct: 241 EPGFQGRSCQDPCPAGTYGSQCVHSCGNCKHSQPCSPVDGFCLACQPGWNGTLCK 295
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 75/268 (27%), Positives = 97/268 (36%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCE-KCRDNYY---QKSGDNFC-- 54
C CN ++RC D TGH C C+ G C KC N Q++G+ C
Sbjct: 164 CQCNLATSRC--D----TLTGH---C-HCRPGWWGRKCRFKCSCNLSPCAQETGNCKCKA 213
Query: 55 ----TAC--NCNPI-GSLNLQCNS-EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCE 105
+AC +CN + GS CN G C C+PG G C D C Y G SC
Sbjct: 214 GFWGSACQWHCNCVHGS----CNPLNGYCSCEPGFQGRSCQDPCPAGTY--GSQCVHSC- 266
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRV---QSRKNFDPAGN-RIWDLRRC 161
G+ K++ C V G C + Q G + E + P R D+
Sbjct: 267 ----GNCKHSQPCSPVDGFCLACQPGWNGTLCKERCTPGFHGQGCLQPCPQCRQGDICDA 322
Query: 162 KRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCD---------RCDVNHYD-FGEAGCK 211
+ + P G CNS C G GD C CD D +AG
Sbjct: 323 ETGSCPRCEPGWTGPSCNSS----CPAGTFGDGCQLLCPECVWGSCDPVSGDCLCQAGYW 378
Query: 212 SCECN---PAG--SVKNTPNCDSVKGQC 234
CN P G V + C +G C
Sbjct: 379 GASCNNTCPEGFFGVNCSSPCQCSRGTC 406
>UNIPROTKB|E1BJ11 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0021591 "ventricular system development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001368
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00208
SMART:SM00303 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0001764 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:YILRAYA
EMBL:DAAA02007576 IPI:IPI00711984 Ensembl:ENSBTAT00000025033
Uniprot:E1BJ11
Length = 2918
Score = 149 (57.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 59/183 (32%), Positives = 77/183 (42%)
Query: 41 CRDNY--YQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT-GDKCDRCDVNHYD-F 96
C D++ Y S D NC + LN C + C KP G C+ C ++ +
Sbjct: 1803 CSDDWDSYSCSCDPGYYGDNCTNVCDLN-PCEHQSMCTRKPSAPHGYTCE-CPPSYLGPY 1860
Query: 97 GEAGC-KSCECNPAGSVKNTP-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
E + C G P NCD KG +S G H + ++ P G+
Sbjct: 1861 CETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTS-GECHCK-----ENHYRPPGSP 1914
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSC 213
L C D YP G SL+ C+ EG+C CKPGV G +CDRCD N F E C
Sbjct: 1915 ACLL--C--DCYPTG---SLSRVCDPEEGQCPCKPGVIGRQCDRCD-N--PFAEVTTNGC 1964
Query: 214 ECN 216
E N
Sbjct: 1965 EVN 1967
Score = 146 (56.5 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 59/195 (30%), Positives = 75/195 (38%)
Query: 61 PIGSLNLQCNSEGRCQCKPGVT-GDKCDR--CDVNHYDFGEAGCKSCECNPAGSVKNTPN 117
P G +L + +PG + D CD C N Y + SC C+P N N
Sbjct: 1766 PEGVSSLDPSRGESINVEPGCSLPDPCDSNPCPANSYCSDDWDSYSCSCDPGYYGDNCTN 1825
Query: 118 -CDSVKGQCESAQLSSR--GRVHTELRVQSRKNFDP-AGNRIWDLRRCKRDTYPLGHGGS 173
CD CE + +R H P RI D + C R + GH
Sbjct: 1826 VCDL--NPCEHQSMCTRKPSAPHGYTCECPPSYLGPYCETRI-D-QPCPRGWW--GHPTC 1879
Query: 174 LNLQCN-SEG-RCQCKPGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSV 230
C+ S+G C T +C C NHY G C C+C P GS+ CD
Sbjct: 1880 GPCNCDVSKGFDPDCNK--TSGEC-HCKENHYRPPGSPACLLCDCYPTGSLSRV--CDPE 1934
Query: 231 KGQCECKDNVEGAQC 245
+GQC CK V G QC
Sbjct: 1935 EGQCPCKPGVIGRQC 1949
Score = 123 (48.4 bits), Expect = 0.00045, P = 0.00045
Identities = 35/108 (32%), Positives = 43/108 (39%)
Query: 22 HGGHCLDCQGDRDGPNCEKCRDNYYQKS--GDNFCTACNCNPIGSLNLQCN-SEGRCQCK 78
HG C +C GP CE D + G C CNC+ + CN + G C CK
Sbjct: 1846 HGYTC-ECPPSYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCK 1904
Query: 79 PGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
NHY G C C+C P GS+ CD +GQC
Sbjct: 1905 E------------NHYRPPGSPACLLCDCYPTGSLSRV--CDPEEGQC 1938
Score = 61 (26.5 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 29/90 (32%), Positives = 40/90 (44%)
Query: 1 CNCN-GFS-NRCFFDKEL-YNRT-GHGGHCLDCQGD-----RDGPNCEKCRDNYYQKSGD 51
C C GF+ + C + +L Y+R G GHC +G RDG E C + +SG
Sbjct: 1269 CRCPPGFTGDYCETEVDLCYSRPCGPHGHCRSREGGYTCLCRDGYTGEHCEVS--ARSGR 1326
Query: 52 NFCTACNCNPIGS-LNLQCNSEGRCQCKPG 80
CT C G+ +NL +C C G
Sbjct: 1327 --CTPGVCKNGGTCVNLLVGGF-KCNCPSG 1353
>FB|FBgn0024836 [details] [associations]
symbol:stan "starry night" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=IEA;ISS]
[GO:0007156 "homophilic cell adhesion" evidence=ISS;IDA;TAS]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA;ISS]
[GO:0016339 "calcium-dependent cell-cell adhesion"
evidence=ISS;IMP] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEP;IMP;NAS] [GO:0007409 "axonogenesis" evidence=IMP;NAS]
[GO:0005911 "cell-cell junction" evidence=IDA] [GO:0005057
"receptor signaling protein activity" evidence=ISM;IMP] [GO:0016358
"dendrite development" evidence=IEP] [GO:0007367 "segment polarity
determination" evidence=IEP;IMP] [GO:0016021 "integral to membrane"
evidence=IEA;ISM;ISS;NAS] [GO:0048813 "dendrite morphogenesis"
evidence=IMP;TAS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0050839 "cell adhesion molecule binding"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=ISS] [GO:0004872 "receptor activity" evidence=ISS]
[GO:0016318 "ommatidial rotation" evidence=IMP;NAS] [GO:0048057
"R3/R4 development" evidence=IMP] [GO:0042067 "establishment of
ommatidial planar polarity" evidence=IMP;TAS] [GO:0007164
"establishment of tissue polarity" evidence=NAS] [GO:0016319
"mushroom body development" evidence=IMP] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=NAS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=TAS] [GO:0007464 "R3/R4 cell fate commitment"
evidence=NAS] [GO:0001736 "establishment of planar polarity"
evidence=IMP;TAS] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0001738 "morphogenesis of a polarized epithelium" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0050770 "regulation
of axonogenesis" evidence=IDA] [GO:0051963 "regulation of synapse
assembly" evidence=IDA] [GO:0035159 "regulation of tube length,
open tracheal system" evidence=IMP] [GO:0070593 "dendrite
self-avoidance" evidence=IMP] [GO:0090175 "regulation of
establishment of planar polarity" evidence=IGI] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00303
EMBL:AE013599 GO:GO:0007411 GO:GO:0005887 GO:GO:0016055
GO:GO:0004930 GO:GO:0007218 GO:GO:0007464 GO:GO:0005509
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0048813 GO:GO:0050770 GO:GO:0051963
GO:GO:0016319 GO:GO:0005057 PROSITE:PS01186 eggNOG:NOG12793
GO:GO:0050839 GO:GO:0007367 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0016339 GO:GO:0007156
GO:GO:0004888 GO:GO:0030178 GO:GO:0030177 GO:GO:0035159
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 KO:K04600 OMA:YILRAYA
GO:GO:0070593 EMBL:AF172329 EMBL:AB028498 RefSeq:NP_001188903.1
RefSeq:NP_724962.3 UniGene:Dm.4360 ProteinModelPortal:Q9V5N8
SMR:Q9V5N8 IntAct:Q9V5N8 STRING:Q9V5N8 PaxDb:Q9V5N8
EnsemblMetazoa:FBtr0088214 EnsemblMetazoa:FBtr0303223 GeneID:36125
KEGG:dme:Dmel_CG11895 CTD:36125 FlyBase:FBgn0024836
InParanoid:Q9V5N8 OrthoDB:EOG4X69Q2 PhylomeDB:Q9V5N8
GenomeRNAi:36125 NextBio:796977 Bgee:Q9V5N8 GermOnline:CG11895
GO:GO:0048057 Uniprot:Q9V5N8
Length = 3579
Score = 161 (61.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 43/131 (32%), Positives = 63/131 (48%)
Query: 1 CNCNGFSNRC-FFDKELYNRTGHG--GH--CLDCQGD-RDG--PNCEK------CRDNYY 46
C CN S + +KEL G G C C+ D G P+C K C+ N+Y
Sbjct: 2025 CECNSSSRHGDYCEKELQQPCPGGWWGERVCGPCRCDLAQGYHPDCNKTTGQCYCKTNHY 2084
Query: 47 QKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK--- 102
Q + C +C+C IGS + CN G+C+C+ GV G +CD C + + +GC+
Sbjct: 2085 QPPNETACLSCDCYSIGSFSGACNPLTGQCECREGVIGRRCDSCSNPYAEVTLSGCEVVY 2144
Query: 103 -SCECNPAGSV 112
+C + AG V
Sbjct: 2145 DACPRSFAGGV 2155
Score = 43 (20.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 118 CDSV--KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIW 156
C++V +G + ++S GR + +++S GN +W
Sbjct: 2235 CEAVDRRGASKDQKISGNGRPNRRYKMESSFLLSNGGN-VW 2274
>UNIPROTKB|A6BM72 [details] [associations]
symbol:MEGF11 "Multiple epidermal growth factor-like
domains protein 11" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0034109 "homotypic cell-cell adhesion"
evidence=ISS] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 GO:GO:0016323
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0010842
GO:GO:0034109 HOGENOM:HOG000294130 Pfam:PF12661 HOVERGEN:HBG108333
OrthoDB:EOG42JNQJ EMBL:AB058677 EMBL:AB300051 EMBL:AY358226
EMBL:AC011847 EMBL:AC084854 EMBL:AC087382 EMBL:BC117419
EMBL:BC126313 EMBL:AL834326 IPI:IPI00064606 IPI:IPI00432703
IPI:IPI00796004 IPI:IPI00872029 RefSeq:NP_115821.2
UniGene:Hs.712886 ProteinModelPortal:A6BM72 SMR:A6BM72
IntAct:A6BM72 MINT:MINT-2877220 STRING:A6BM72 PhosphoSite:A6BM72
PRIDE:A6BM72 Ensembl:ENST00000288745 Ensembl:ENST00000360698
Ensembl:ENST00000395614 Ensembl:ENST00000395625
Ensembl:ENST00000409699 Ensembl:ENST00000422354 GeneID:84465
KEGG:hsa:84465 UCSC:uc002apl.2 UCSC:uc002apm.2 CTD:84465
GeneCards:GC15M066187 H-InvDB:HIX0018384 HGNC:HGNC:29635
HPA:HPA017982 MIM:612454 neXtProt:NX_A6BM72 PharmGKB:PA144596411
InParanoid:A6BM72 OMA:ECMNNST ChiTaRS:MEGF11 GenomeRNAi:84465
NextBio:74270 ArrayExpress:A6BM72 Bgee:A6BM72 CleanEx:HS_MEGF11
Genevestigator:A6BM72 Uniprot:A6BM72
Length = 1044
Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 62/241 (25%), Positives = 86/241 (35%)
Query: 29 CQGDRDGPNCEK-CRDNYYQKSGDNFCTACN---CNPI-GSLNLQCNSEG-RCQ--CKPG 80
C+ GP+C C +++ N C N CNPI G+ G RC+ C PG
Sbjct: 120 CEPGWGGPDCSSGCDSDHWGPHCSNRCQCQNGALCNPITGACVCAAGFRGWRCEELCAPG 179
Query: 81 VTGDKCDR-CDVNHYDFGEAGCKSCECNPAGS-VKNTPNCD--SVKGQCE-SAQLSSRGR 135
G C C H + C C P + V C S CE + G
Sbjct: 180 THGKGCQLPCQCRHGASCDPRAGECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGT 239
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTY--------PLGHGGSLNLQCNS-EGRCQC 186
H + P + C T+ P HGG QC+ G+C C
Sbjct: 240 CH---HITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCPCHHGG----QCDHVTGQCHC 292
Query: 187 KPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
G GD+C + C FG + C+C+ G C G CEC+ +G +C
Sbjct: 293 TAGYMGDRCQEECPFG--SFGFQCSQHCDCHNGGQ------CSPTTGACECEPGYKGPRC 344
Query: 246 R 246
+
Sbjct: 345 Q 345
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 58/249 (23%), Positives = 85/249 (34%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C C G C + C + G N C C+ G + + G+C C G
Sbjct: 245 GECA-CPPGWTGAVCAQPCPPGTF---GQNCSQDCPCHHGGQCD---HVTGQCHCTAGYM 297
Query: 83 GDKC-DRCDVNHYDFGEAGCKSC----ECNPA-GSVKNTPNCDSVKGQ---CESAQLSSR 133
GD+C + C + F + C +C+P G+ + P + Q C
Sbjct: 298 GDRCQEECPFGSFGFQCSQHCDCHNGGQCSPTTGACECEPGYKGPRCQERLCPEGLHGPG 357
Query: 134 GRVHTELRVQSRKNFDPAGNRI-----WDLRRCKRDTYPLGH-GGSLNLQCNSE------ 181
+ + + P W C ++ P+G+ G L C +
Sbjct: 358 CTLPCPCDADNTISCHPVTGACTCQPGWSGHHCN-ESCPVGYYGDGCQLPCTCQNGADCH 416
Query: 182 ---GRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCEC 236
G C C PG G+ C C Y C S C CN G+ C V G C C
Sbjct: 417 SITGGCTCAPGFMGEVCAVSCAAGTYG---PNCSSICSCNNGGT------CSPVDGSCTC 467
Query: 237 KDNVEGAQC 245
K+ +G C
Sbjct: 468 KEGWQGLDC 476
Score = 125 (49.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 66/247 (26%), Positives = 81/247 (32%)
Query: 23 GGHC-LDCQGDRDGPNCEK---CRDNYYQKSGDNFCTA------CNCN---PIGSLNLQC 69
G C + C GPNC C + D CT +C P G+ L C
Sbjct: 430 GEVCAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSCTCKEGWQGLDCTLPCPSGTWGLNC 489
Query: 70 NSEGRCQCKPGVTGDKCD-RCDVNHYDFGEA-------GCKSCECNPAGSVKNTPNCDSV 121
N C C G D C G+ G C+ + CD V
Sbjct: 490 NES--CTCANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCDPV 547
Query: 122 KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE 181
G C L+ T +R S P G W C +GGS C+ E
Sbjct: 548 TGHC--CCLAG----WTGIRCDSTC---PPGR--WG-PNCSVSC-SCENGGS----CSPE 590
Query: 182 -GRCQCKPGVTGDKCDR-CDVNHYDFGEAG-CKSCECNPAGSVKNTPNCDSVKGQCECKD 238
G C+C PG G C R C Y G A C C V ++ C + G CEC
Sbjct: 591 DGSCECAPGFRGPLCQRICPPGFYGHGCAQPCPLC-------VHSSRPCHHISGICECLP 643
Query: 239 NVEGAQC 245
GA C
Sbjct: 644 GFSGALC 650
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 76/269 (28%), Positives = 96/269 (35%)
Query: 1 CNCN-GFSN-RCFFDKELYNRTGHGGHC-LDCQGDRDGPNCEKCRDNYYQKSGDNFCTAC 57
C C G+ RC + L HG C L C D D N C + +G AC
Sbjct: 333 CECEPGYKGPRC--QERLCPEGLHGPGCTLPCPCDAD--NTISC----HPVTG-----AC 379
Query: 58 NCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS----CECNPA--G 110
C P G CN C G GD C C + G A C S C C P G
Sbjct: 380 TCQP-GWSGHHCNES----CPVGYYGDGCQLPCTCQN---G-ADCHSITGGCTCAPGFMG 430
Query: 111 SV------KNT--PNCDSVKGQCESAQLSSR--GRVHTELRVQSRKNFDPAGNRIWDLRR 160
V T PNC S+ C + S G + Q P + W L
Sbjct: 431 EVCAVSCAAGTYGPNCSSICS-CNNGGTCSPVDGSCTCKEGWQGLDCTLPCPSGTWGLN- 488
Query: 161 CKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPA 218
C ++ +G + C+ +G C C PG GD C+ C FG + C+C+ A
Sbjct: 489 CN-ESCTCANGAA----CSPIDGSCSCTPGWLGDTCELPCPDG--TFGLNCSEHCDCSHA 541
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
CD V G C C G +C S
Sbjct: 542 DG------CDPVTGHCCCLAGWTGIRCDS 564
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 62/250 (24%), Positives = 92/250 (36%)
Query: 24 GHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACN---CNPIGSLNLQCNSEGRCQCKP 79
G C C+ G +C C + + + CT N C+PI +G C C P
Sbjct: 463 GSCT-CKEGWQGLDCTLPCPSGTWGLNCNESCTCANGAACSPI---------DGSCSCTP 512
Query: 80 GVTGDKCDR-CDVNHYDFGEAGCKSCECNPA-GSVKNTPNCDSVKG----QCESAQLSSR 133
G GD C+ C FG + C+C+ A G T +C + G +C+S R
Sbjct: 513 GWLGDTCELPCPDG--TFGLNCSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDSTCPPGR 570
Query: 134 -G-RVHTELRVQSRKNFDPAGNRIW---DLRR--CKRDTYP--LGHGGSL--------NL 176
G ++ + P R C+R P GHG + +
Sbjct: 571 WGPNCSVSCSCENGGSCSPEDGSCECAPGFRGPLCQRICPPGFYGHGCAQPCPLCVHSSR 630
Query: 177 QCNS-EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C+ G C+C PG +G C++ Y FG+ + C C N C + G C+
Sbjct: 631 PCHHISGICECLPGFSGALCNQVCAGGY-FGQDCAQLCSC------ANNGTCSPIDGSCQ 683
Query: 236 CKDNVEGAQC 245
C G C
Sbjct: 684 CFPGWIGKDC 693
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 61/228 (26%), Positives = 87/228 (38%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGE 98
+C YY+ SGD FC C ++ +C S C C+PG G C CD +H+ G
Sbjct: 87 QCCPGYYE-SGD-FCIPL-CTE-ECVHGRCVSPDTCHCEPGWGGPDCSSGCDSDHW--GP 140
Query: 99 AGCKSCECNPAGSVKN--TPNCDSVKG----QCESAQLSSRGRVHTELRVQSRK--NFDP 150
C+C G++ N T C G +CE +L Q R + DP
Sbjct: 141 HCSNRCQCQN-GALCNPITGACVCAAGFRGWRCEELCAPGTHGKGCQLPCQCRHGASCDP 199
Query: 151 -AGNRI----WDLRRCKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDF 205
AG + + C+ P HG L+C + C +TG+ C C
Sbjct: 200 RAGECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHH-ITGE-C-ACPPGWT-- 254
Query: 206 GEAGCKSCECNPAGS--VKNTP-----NCDSVKGQCECKDNVEGAQCR 246
G + C G ++ P CD V GQC C G +C+
Sbjct: 255 GAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHCTAGYMGDRCQ 302
Score = 110 (43.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 23/66 (34%), Positives = 31/66 (46%)
Query: 182 GRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C C+ G TG C+ RC + +G C+ CEC N CD V G C C
Sbjct: 766 GKCTCRTGFTGQHCEQRCAPGTFGYG---CQQLCEC------MNNSTCDHVTGTCYCSPG 816
Query: 240 VEGAQC 245
+G +C
Sbjct: 817 FKGIRC 822
Score = 109 (43.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 170 HGGSLNLQCNSE-GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNC 227
H G+ C++E G C C PG TG C RC FG+ + C+C +N +C
Sbjct: 713 HNGA---SCSAEDGACHCTPGWTGLFCTQRCPAAF--FGKDCGRVCQC------QNGASC 761
Query: 228 DSVKGQCECKDNVEGAQC 245
D + G+C C+ G C
Sbjct: 762 DHISGKCTCRTGFTGQHC 779
Score = 85 (35.0 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 22/66 (33%), Positives = 25/66 (37%)
Query: 182 GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNV 240
G C C G TG +CD C + G SC C GS C G CEC
Sbjct: 549 GHCCCLAGWTGIRCDSTCPPGRW--GPNCSVSCSCENGGS------CSPEDGSCECAPGF 600
Query: 241 EGAQCR 246
G C+
Sbjct: 601 RGPLCQ 606
Score = 77 (32.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 36/124 (29%), Positives = 47/124 (37%)
Query: 7 SNRCFFDK-ELYNRTGHGGHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTA-CNCNPIG 63
SNRC L N G C+ G R G CE+ C + K C C C
Sbjct: 143 SNRCQCQNGALCNPIT--GACVCAAGFR-GWRCEELCAPGTHGKG----CQLPCQCRHGA 195
Query: 64 SLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSV 121
S + + G C C PG TG C+ C + A C+ C C G+ C +
Sbjct: 196 SCDPRA---GECLCAPGYTGVYCEELCPPGSHG---AHCELRCPCQNGGT------CHHI 243
Query: 122 KGQC 125
G+C
Sbjct: 244 TGEC 247
>UNIPROTKB|H7C557 [details] [associations]
symbol:MEGF6 "Multiple epidermal growth factor-like domains
protein 6" species:9606 "Homo sapiens" [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
EMBL:AL512413 Pfam:PF12661 EMBL:AL513320 HGNC:HGNC:3232
ProteinModelPortal:H7C557 Ensembl:ENST00000485002 Uniprot:H7C557
Length = 1156
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 72/250 (28%), Positives = 96/250 (38%)
Query: 24 GHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVT 82
GHC C G +C++ D + G + CNC+ G + C++ G C C+ G
Sbjct: 683 GHC-SCAPGWTGFSCQRACDTGHW--GPDCSHPCNCSA-G--HGSCDAISGLCLCEAGYV 736
Query: 83 GDKCDR-CDVNHYDFGEAGCKS-CECNPAGS---VKNTPNCDSV-KGQ-CESA------Q 129
G +C++ C H FG GC+ C+C + V C + +G CE A
Sbjct: 737 GPRCEQQCPQGH--FGP-GCEQRCQCQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFG 793
Query: 130 LSSRGRVH-TELRVQSRKNFD---PAGNR-IWDLRRCKRDTYPLGHGGSLNLQC-NS--- 180
L R + T N PAG R C TY GH S C N
Sbjct: 794 LDCRSACNCTAGAACDAVNGSCLCPAGRRGPRCAETCPAHTY--GHNCSQACACFNGASC 851
Query: 181 ---EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCE 235
G+C C PG G C C Y G+ C+ SC C G+ CD V G C
Sbjct: 852 DPVHGQCHCAPGWMGPSCLQACPAGLY--GD-NCRHSCLCQNGGT------CDPVSGHCA 902
Query: 236 CKDNVEGAQC 245
C + G C
Sbjct: 903 CPEGWAGLAC 912
Score = 143 (55.4 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 68/248 (27%), Positives = 92/248 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCN-SEGRCQCKPGV 81
G CL C G C+ C +Y G + T C+C G C+ + G C C PG
Sbjct: 640 GACL-CLPGFVGSRCQDVCPAGWY---GPSCQTRCSCANDG----HCHPATGHCSCAPGW 691
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPA-GS---VKNTPNCDS--VKGQCESAQLSSRG 134
TG C R CD H+ G C C+ GS + C++ V +CE
Sbjct: 692 TGFSCQRACDTGHW--GPDCSHPCNCSAGHGSCDAISGLCLCEAGYVGPRCEQQCPQGHF 749
Query: 135 RVHTELRVQSRKNF--D--------PAGNR-IWDLRRCKRDTYPLGHGGSLNLQ----CN 179
E R Q + D PAG R + C + L + N C+
Sbjct: 750 GPGCEQRCQCQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFGLDCRSACNCTAGAACD 809
Query: 180 S-EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
+ G C C G G +C + C + Y G ++C C N +CD V GQC C
Sbjct: 810 AVNGSCLCPAGRRGPRCAETCPAHTY--GHNCSQACACF------NGASCDPVHGQCHCA 861
Query: 238 DNVEGAQC 245
G C
Sbjct: 862 PGWMGPSC 869
Score = 119 (46.9 bits), Expect = 0.00046, P = 0.00046
Identities = 74/275 (26%), Positives = 103/275 (37%)
Query: 1 CNC--NGFSNR----CFFDKELYNRTGHGGHCLDCQGDRDGPNC-EKCRD-NYYQKSGDN 52
CNC G +R C D LY R H L C GP C E+C+ + +S D
Sbjct: 451 CNCANRGRCHRLYGACLCDPGLYGRFCH----LTCPPWAFGPGCSEECQCVQPHTQSCDK 506
Query: 53 FCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR---CDVN-HYDF--GEAG--C--- 101
+C+C G +C +E C+ G G C + C V D GE G C
Sbjct: 507 RDGSCSCKA-GFRGERCQAE----CELGYFGPGCWQACTCPVGVACDSVSGECGKRCPAG 561
Query: 102 ---KSC--ECNPAGS--VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNR 154
+ C EC P G+ V + +C C ++ + R + + P G
Sbjct: 562 FQGEDCGQEC-PVGTFGVNCSSSCSCGGAPCHG--VTGQCRCPPGRTGEDCEADCPEGR- 617
Query: 155 IWDLRRCKRDTYPLGHGGSLNLQCNSE-GRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKS 212
W L C+ H +C+ E G C C PG G +C D C Y G + C++
Sbjct: 618 -WGLG-CQEICPACQHAA----RCDPETGACLCLPGFVGSRCQDVCPAGWY--GPS-CQT 668
Query: 213 -CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
C C N +C G C C G C+
Sbjct: 669 RCSC------ANDGHCHPATGHCSCAPGWTGFSCQ 697
>MGI|MGI:2685330 [details] [associations]
symbol:Ntn5 "netrin 5" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:2685330 GO:GO:0005576
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 EMBL:AC167242 HOGENOM:HOG000286017
GeneTree:ENSGT00700000104042 CTD:126147 eggNOG:NOG327968
HOVERGEN:HBG096704 OMA:GGPFLLT OrthoDB:EOG402WS1 EMBL:AK142898
EMBL:BC150901 IPI:IPI00876295 IPI:IPI00923643 RefSeq:NP_001028528.2
UniGene:Mm.291240 ProteinModelPortal:Q3UQ22 SMR:Q3UQ22 PRIDE:Q3UQ22
Ensembl:ENSMUST00000107742 GeneID:243967 KEGG:mmu:243967
InParanoid:Q3UQ22 NextBio:386070 CleanEx:MM_GM484
Genevestigator:Q3UQ22 Uniprot:Q3UQ22
Length = 452
Score = 150 (57.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 44/158 (27%), Positives = 66/158 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSGDNF--- 53
C C+G + RC R C C+ GP CE CR ++ ++ +
Sbjct: 173 CQCHGHAARCA------TRA-QPPRCR-CRHHTTGPGCESCRPSHRDWPWRPATPQHPHP 224
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
C C C+PIG+ CN + G+C CK GVTG C+RC Y + C+ P +
Sbjct: 225 CLPCQCHPIGATGGMCNQTSGQCSCKLGVTGLTCNRCGPG-YQQSRSPRMPCQRIPEATT 283
Query: 113 K--NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
TP QC+ S VH L+ ++++
Sbjct: 284 TPATTPVASRSDPQCQGYCNVSVSSVHMSLQRYCQQDY 321
Score = 112 (44.5 bits), Expect = 0.00085, P = 0.00085
Identities = 25/85 (29%), Positives = 37/85 (43%)
Query: 170 HGGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG--------EAGCKSCECNPAGS 220
HG + ++ RC+C+ TG C+ C +H D+ C C+C+P G+
Sbjct: 176 HGHAARCATRAQPPRCRCRHHTTGPGCESCRPSHRDWPWRPATPQHPHPCLPCQCHPIGA 235
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
C+ GQC CK V G C
Sbjct: 236 TGGM--CNQTSGQCSCKLGVTGLTC 258
>UNIPROTKB|Q22KY6 [details] [associations]
symbol:TTHERM_01178680 "Neurohypophysial hormone,
N-terminal Domain containing protein" species:312017 "Tetrahymena
thermophila SB210" [GO:0004252 "serine-type endopeptidase activity"
evidence=ISS] InterPro:IPR000742 SMART:SM00181 GO:GO:0004252
InterPro:IPR015500 PANTHER:PTHR10795 InterPro:IPR006212
InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184 EMBL:GG662532
RefSeq:XP_976537.1 ProteinModelPortal:Q22KY6
EnsemblProtists:EAR85942 GeneID:7836315 KEGG:tet:TTHERM_01178680
ProtClustDB:CLSZ2497429 Uniprot:Q22KY6
Length = 2391
Score = 157 (60.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 71/265 (26%), Positives = 106/265 (40%)
Query: 3 CN-GFSN-----RCFFDKELYNRTGHGGHCLDCQGD----RDGPNCEKCRDNYYQKSGDN 52
CN GF N +C D L +G C+ CQ + D C+ C+ + Q N
Sbjct: 1343 CNFGFYNNNGKCQCSVDNCLQCNPTYGKLCIQCQTNYLLSSDQLKCQ-CQVSNCQICNQN 1401
Query: 53 FCTAC-NC----NPIGSLNL-QCNSEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCE 105
+ C NC P + QC S CQ C P + G CD C N+ + C
Sbjct: 1402 DGSLCDNCVVGYAPQNDNKICQC-SVSNCQNCNP-LNGSLCDECKYNY--IMSSDFTQCS 1457
Query: 106 CNPAGSVKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT 165
C+ G K + S+ C S +SS + V + + DP I ++C ++
Sbjct: 1458 CSVVGCQKCNYSDGSICDTCISGYISSNDNKSCQCSVANCQVCDPTNGFI--CKQCLQN- 1514
Query: 166 YPLGHGGSLNLQCN-SEGRCQ-CKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKN 223
Y L S QCN S CQ C+ G C+ C + Y K C+C+ A ++
Sbjct: 1515 YSLS---SDKTQCNCSVSNCQQCQQN-DGSICNSC-IKGYILSNDN-KVCQCSVANCLEC 1568
Query: 224 TPNCDSVKGQCECKDNVEG--AQCR 246
S+ +C+ N+ G QC+
Sbjct: 1569 NHQNGSICNKCQQNFNLNGDSTQCQ 1593
Score = 138 (53.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 61/247 (24%), Positives = 100/247 (40%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGR-C-QCKPG- 80
+C C +DG C+ C + YY + + C+ C+ N L CN+ G+ C QC+P
Sbjct: 1260 NCQVCNS-KDGYICDTCANGYYPSNNNTICS-CSVNNC----LVCNALNGKFCDQCQPNF 1313
Query: 81 -VTGDK---------CDRC---DVNHYDFGEAGCKS----CECNPAGSVKNTPNCDSVKG 123
++ DK C +C D N F G + C+C+ ++ P +
Sbjct: 1314 QLSDDKKTCICQAQYCYQCSLLDGNICGFCNFGFYNNNGKCQCSVDNCLQCNPTYGKLCI 1373
Query: 124 QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGR 183
QC++ L S ++ + +V + + + + D C P + QC S
Sbjct: 1374 QCQTNYLLSSDQLKCQCQVSNCQICNQNDGSLCD--NCVVGYAP--QNDNKICQC-SVSN 1428
Query: 184 CQ-CKPGVTGDKCDRCDVNHY---DFGEAGCKSCECNPAGSVKNTPNCDS-VKGQCECKD 238
CQ C P + G CD C N+ DF + C C + + CD+ + G D
Sbjct: 1429 CQNCNP-LNGSLCDECKYNYIMSSDFTQCSCSVVGCQKC-NYSDGSICDTCISGYISSND 1486
Query: 239 NVEGAQC 245
N + QC
Sbjct: 1487 N-KSCQC 1492
Score = 129 (50.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 65/247 (26%), Positives = 102/247 (41%)
Query: 25 HCLDCQGDRDGPNCEKCRDNYYQKSGDN-----FCTAC-NCNPI-GSLNLQC-------N 70
+C CQ +G C++C NY Q S D F C +CNP G + C N
Sbjct: 1090 NCKQCQAS-NGNLCDECYTNY-QLSNDKTQCQCFVQNCQSCNPSDGFVCDNCVVGYISQN 1147
Query: 71 SEGRCQCKPGVT---------GDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD-- 119
++ CQC GV+ G+ CD+C N+Y + C C V N NC+
Sbjct: 1148 NKKNCQC--GVSNCQICNQSNGNICDKC-TNNY-INSSDQTQCSCQ----VANCRNCNVD 1199
Query: 120 --SVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQ 177
S+ C + L + + + V++ + +P+ + + +C ++ Y Q
Sbjct: 1200 DGSICDTCLTGYLLTNNSKYCQCSVENCQVCNPSDGSLCN--QCSKN-YIKNLDSK---Q 1253
Query: 178 CN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CE 235
CN S CQ G CD C N Y + C C SV N C+++ G+ C+
Sbjct: 1254 CNCSVSNCQVCNSKDGYICDTC-ANGY-YPSNNNTICSC----SVNNCLVCNALNGKFCD 1307
Query: 236 -CKDNVE 241
C+ N +
Sbjct: 1308 QCQPNFQ 1314
>UNIPROTKB|F1ML32 [details] [associations]
symbol:SCARF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048680 "positive regulation of axon regeneration"
evidence=IEA] [GO:0030169 "low-density lipoprotein particle
binding" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005044
"scavenger receptor activity" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 GO:GO:0016358
GO:GO:0016322 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 GO:GO:0048680 GO:GO:0030169 InterPro:IPR009030
SUPFAM:SSF57184 GO:GO:0005044 GeneTree:ENSGT00690000101691
OMA:GWWGPEC EMBL:DAAA02048662 IPI:IPI00711101
Ensembl:ENSBTAT00000015261 Uniprot:F1ML32
Length = 841
Score = 152 (58.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 65/255 (25%), Positives = 96/255 (37%)
Query: 16 LYNRTGHGGHCLDCQGDR----DGPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQ-- 68
L G G LD G P+ E +C + +K D CT C + +
Sbjct: 22 LLEALGAPGSELDAGGRHVCKASSPSAELQCCPGWRRK--DRECTIPICEGLDACREDEV 79
Query: 69 CNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKG--Q 124
C G C+CKPG G +C+ RC ++ C+ C C+P G C+ G
Sbjct: 80 CVKPGLCRCKPGFFGAQCNSRCPGQYWG---PDCREVCACHPHGQ------CEPATGVCH 130
Query: 125 CESAQLSSRGRVHTELRVQSRKNFDPAGNRI---WDLRRCKRDTYPLGHGGSLNLQCN-S 180
C+ + R R N + R W C+R P + +C+ +
Sbjct: 131 CQPDRWGDRCEFPCACGPHGRCNPETGACRCEPGWWSPTCRR---PCQCNPAA-ARCDQA 186
Query: 181 EGRCQCKPGVTGDKCD-RCDVNH----YDFGEAGCK----SCECN-PAGSVKNTPNCDSV 230
G C C+PG G +C RC + + G C+ EC P V+ C +V
Sbjct: 187 TGSCLCEPGWWGRRCSFRCACHGSPCAQESGRCACRPGWWGPECRQPCECVRG--RCSAV 244
Query: 231 KGQCECKDNVEGAQC 245
GQC C +G +C
Sbjct: 245 SGQCSCPPGFQGVRC 259
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 68/252 (26%), Positives = 94/252 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNP--IG---SLNLQCNSE----- 72
G C C+ P C + C+ N D +C C P G S C+
Sbjct: 157 GACR-CEPGWWSPTCRRPCQCNPAAARCDQATGSCLCEPGWWGRRCSFRCACHGSPCAQE 215
Query: 73 -GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECN-PAG--SVKNTPNCDSVKGQCES 127
GRC C+PG G +C + C+ G S +C+ P G V+ C + GQ
Sbjct: 216 SGRCACRPGWWGPECRQPCECVR---GRCSAVSGQCSCPPGFQGVRCELPCPA--GQYGL 270
Query: 128 AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-------- 179
S G + A W+ +C + P G + + QC
Sbjct: 271 RCRDSCGHCKQNKPCSADTGSCEACKPGWNGTQCHQPCPPGTFGENCSQQCPHCRLGEAC 330
Query: 180 --SEGRCQ-CKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
G CQ C+PG G +C D C + FGE GC S C P V+ CD+V G+C
Sbjct: 331 QPDTGHCQRCEPGWRGPRCEDPCLIG--TFGE-GCGST-C-PT-CVQGA--CDAVTGECV 382
Query: 236 CKDNVEGAQCRS 247
C G C +
Sbjct: 383 CNAGYWGPSCNT 394
>UNIPROTKB|A6QP76 [details] [associations]
symbol:PEAR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043654 "recognition of apoptotic cell" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
HOGENOM:HOG000294130 Pfam:PF12661 GeneTree:ENSGT00690000101691
GO:GO:0043654 HOVERGEN:HBG108333 CTD:375033 eggNOG:NOG320509
OMA:PPGTWGF OrthoDB:EOG451DPW EMBL:DAAA02007120 EMBL:BC149186
IPI:IPI00712923 RefSeq:NP_001094770.1 UniGene:Bt.27046
Ensembl:ENSBTAT00000033952 GeneID:787112 KEGG:bta:787112
InParanoid:A6QP76 NextBio:20928268 Uniprot:A6QP76
Length = 1040
Score = 153 (58.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 72/250 (28%), Positives = 90/250 (36%)
Query: 24 GHCLDCQGDRDGPNCEK--CRDNYYQKSGDNFCTA-CNCNPIGSLNLQCNSEGRCQCKPG 80
G CL C+ G C + C D Y S C C C+P SL+ S G C C PG
Sbjct: 332 GACL-CEHGFTGDRCAERLCPDGLYGLS----CQVPCTCDPEHSLSCHPMS-GECSCLPG 385
Query: 81 VTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVK-NTPNCDSVKG----QCESAQLSSR 133
G C+ C D GC+ C C G + ++ C G C S
Sbjct: 386 WAGLHCNESCP---QDTHGPGCQEHCLCLHGGVCQPDSGLCRCAPGYTGPHCASLCPPDT 442
Query: 134 GRVHTELRVQSRKNF--DPA-GNRI----WDLRRCKRDTYP--LGHGGSLNLQCNSE--- 181
V+ R P G + W C P G G + + QC E
Sbjct: 443 YGVNCSQRCSCENAIACSPIDGTCVCKEGWQRGNCSVPCPPGTWGFGCNASCQCAHEAAC 502
Query: 182 ----GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCE 235
G C C PG G C C FGE GC S C+C+ A CD V G C+
Sbjct: 503 SPQTGACTCTPGWHGTNCQLPCPKGQ--FGE-GCASRCDCDHADG------CDPVHGHCQ 553
Query: 236 CKDNVEGAQC 245
C+ G +C
Sbjct: 554 CQAGWTGTRC 563
Score = 144 (55.7 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 61/230 (26%), Positives = 84/230 (36%)
Query: 35 GPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNH 93
GP C+K + S D AC+C P G C C PG+ G C C +
Sbjct: 141 GPKCDKPCNCGNSSSCDPKSGACSC-PSGLQPPHCLQP----CSPGLYGPACQFSCQCHG 195
Query: 94 YDFG-EAGCKSCECNPAGSVKNTPNCD------SVKGQCESAQLSSRGRVHTELRVQSRK 146
+ G +C C P + P C+ SV C S G V +
Sbjct: 196 APCNPQTG--ACLCPPE---RTGPTCEVSCSPSSVGFSCPSTPPCQNGGV---FQASQDS 247
Query: 147 NFDPAGNRIWDLRRCKRDTYPLG-HGGSLNLQCNSE---------GRCQCKPGVTGDKC- 195
P G W C P G HG + + +C G+C+C PG TGD+C
Sbjct: 248 CSCPPG---WTGTICSLPC-PEGFHGPNCSQECRCHNGGLCDRFTGQCRCAPGYTGDRCR 303
Query: 196 DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ C V FG+ ++C+C P C G C C+ G +C
Sbjct: 304 EECPVGR--FGQDCAETCDCAPGA------RCFPANGACLCEHGFTGDRC 345
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 69/267 (25%), Positives = 91/267 (34%)
Query: 3 CNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCT---ACN 58
CN S +C + +TG C C G NC+ C + + + C A
Sbjct: 490 CNA-SCQCAHEAACSPQTGA---CT-CTPGWHGTNCQLPCPKGQFGEGCASRCDCDHADG 544
Query: 59 CNPI-GSLNLQCNSEG-RCQ--CKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVK 113
C+P+ G Q G RC C G G C C + +C C P
Sbjct: 545 CDPVHGHCQCQAGWTGTRCHQPCPEGFWGANCSNACACRNGGTCIPKNGNCVCAPGF--- 601
Query: 114 NTPNCDSV--KGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHG 171
P C G+ + + H+ + + AG W C + PLGH
Sbjct: 602 RGPFCQKSCQPGRYGKRCVPCKCANHSSCHPSNGTCYCLAG---WTGPDCSQPC-PLGHW 657
Query: 172 GS--LNL-QCN-------SEGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKS-CECNPAG 219
G+ L QC +G C C PG TG C + C FG A C C+C P
Sbjct: 658 GANCAQLCQCRHGGTCHPQDGSCFCPPGWTGHLCLEGCSPGM--FG-ANCSQPCQCGPG- 713
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQCR 246
C G C C GA CR
Sbjct: 714 -----ERCHPETGACVCPPGHSGAPCR 735
Score = 93 (37.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 26/83 (31%), Positives = 32/83 (38%)
Query: 165 TYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKN 223
T P +GG S+ C C PG TG C C + G + C C+ G
Sbjct: 232 TPPCQNGGVFQA---SQDSCSCPPGWTGTICSLPCPEGFH--GPNCSQECRCHNGGL--- 283
Query: 224 TPNCDSVKGQCECKDNVEGAQCR 246
CD GQC C G +CR
Sbjct: 284 ---CDRFTGQCRCAPGYTGDRCR 303
Score = 68 (29.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 68 QCNSEGR---CQ--CKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNC 118
QC + R C C PGV G KCD+ C+ + + +C C P+G P+C
Sbjct: 121 QCVQDWRGDDCSSACAPGVWGPKCDKPCNCGNSSSCDPKSGACSC-PSGL--QPPHC 174
>ZFIN|ZDB-GENE-090730-1 [details] [associations]
symbol:megf8 "multiple EGF-like-domains 8"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0061371 "determination of heart
left/right asymmetry" evidence=IMP] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:1900164
"nodal signaling pathway involved in determination of lateral
mesoderm left/right asymmetry" evidence=IMP] [GO:0042074 "cell
migration involved in gastrulation" evidence=IMP] [GO:0055113
"epiboly involved in gastrulation with mouth forming second"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR006652 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01344 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-090730-1 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 GO:GO:0007368 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0042074 GO:GO:0055113
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR024731 Pfam:PF12947
EMBL:BX571757 EMBL:BX571761 IPI:IPI00933480
Ensembl:ENSDART00000110951 Uniprot:F1R219
Length = 2774
Score = 157 (60.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 68/244 (27%), Positives = 99/244 (40%)
Query: 21 GHGGHC---LDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQC 77
GH HC DC +G +C CR Y S C C G +N C S G CQC
Sbjct: 2129 GHH-HCNVTQDCHDLPEGYHCT-CRQGYVLSSVSGQCEPV-CAQ-GCVNGTCISPGICQC 2184
Query: 78 KPGVTGDKCD-RCDVNHYDFGEAGCKSC-ECNPAGSVKNTP---NCDSVKGQCESAQLSS 132
G G+ C +C N + + CKS + + KN +CD K + +
Sbjct: 2185 HFGFVGENCSSQCRCNKH----SNCKSISQLDTCLECKNNTKGQHCDKCKPLFVGSAMG- 2239
Query: 133 RGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDT-YPLGHGGSLNLQCNSEGR------C- 184
G + R R N D ++ + + YPL S+ Q +EG C
Sbjct: 2240 -GGMCRPCREFCRGNSDICLSKDEHNKAMENPKDYPLDRE-SIE-QWATEGPTEDHAVCV 2296
Query: 185 QCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQ-CECKDNVEGA 243
C+ GDKC+ C ++ Y + C+ C+CN G + C+ G C C++N E +
Sbjct: 2297 SCQNNSVGDKCESC-LSGYFLLQGKCEKCQCN--G---HADTCNEHDGTGCPCQNNTETS 2350
Query: 244 QCRS 247
C S
Sbjct: 2351 SCLS 2354
Score = 112 (44.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 31/91 (34%), Positives = 40/91 (43%)
Query: 24 GHCLDCQG-D-RDGPNCEKCRDNYYQKS---GDNFCTACNCNPIGS-LNLQC-NSEGRCQ 76
G C CQG D GP+CE C+ + + GD C C CN G L C N G+C
Sbjct: 1161 GICDQCQGLDWTTGPHCEHCKPGSFGSALARGDG-CVPCQCNGHGDPLQGFCHNQTGQCY 1219
Query: 77 CKPGVTGDKCDRCDVNHY-DFGEAGCKSCEC 106
C G C+ C +Y D + G +C
Sbjct: 1220 CTHHTQGPHCESCLPGYYGDPRDNGTCFSQC 1250
Score = 64 (27.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/95 (26%), Positives = 38/95 (40%)
Query: 156 WDLRRCKRDTYPLGHGGSLNLQCNSE---GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKS 212
W ++RC + G S Q ++ G C+C G+ G +CDR V C
Sbjct: 1393 W-VKRCGNGSTDEGTVISAECQAGAQCINGLCECPHGLGGPQCDR-PV---------CPG 1441
Query: 213 CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
C G+ + C+ G C C + G+ C S
Sbjct: 1442 -SC---GAEEGRGTCNMNLGLCVCTEGWAGSDCSS 1472
>UNIPROTKB|F1SKK7 [details] [associations]
symbol:CELSR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00181 SMART:SM00303
GO:GO:0016021 GO:GO:0005886 GO:GO:0001764 GO:GO:0004930
GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007413
GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170 Pfam:PF02210
EMBL:CU861514 EMBL:CU633242 Ensembl:ENSSSCT00000012437 OMA:PLYAPRW
Uniprot:F1SKK7
Length = 3307
Score = 157 (60.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 36/116 (31%), Positives = 54/116 (46%)
Query: 1 CNCNG--FSNRCFFDKELYNRTGHGGH--CLDCQGD-RDG--PNCEK------CRDNYYQ 47
C+C G F + C + G G C C D G PNC K C++ +Y+
Sbjct: 2002 CDCVGGYFGHHCEHRMDQQCPRGWWGSPTCGPCNCDVHKGFDPNCNKTNGQCHCKEFHYR 2061
Query: 48 KSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 102
G + C C+C P+GS + C G+C C+PG G +C+ CD + +GC+
Sbjct: 2062 PRGSDLCLPCDCYPVGSTSRSCAPHSGQCPCRPGALGRQCNSCDSPFAEVTASGCQ 2117
>UNIPROTKB|J9NZ15 [details] [associations]
symbol:CELSR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR017983
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00181 SMART:SM00303 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
Pfam:PF02210 OMA:DGRRVDM EMBL:AAEX03012233
Ensembl:ENSCAFT00000042870 Uniprot:J9NZ15
Length = 3323
Score = 157 (60.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 36/116 (31%), Positives = 54/116 (46%)
Query: 1 CNCNG--FSNRCFFDKELYNRTGHGGH--CLDCQGD-RDG--PNCEK------CRDNYYQ 47
C+C G F + C + G G C C D G PNC K C++ +Y+
Sbjct: 2008 CDCVGGYFGHHCEHRMDQQCPRGWWGSPTCGPCNCDVHKGFDPNCNKTNGQCHCKEFHYR 2067
Query: 48 KSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 102
G + C C+C P+GS + C G+C C+PG G +C+ CD + +GC+
Sbjct: 2068 PQGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPGALGRQCNSCDSPFAEVTASGCR 2123
>UNIPROTKB|I3LNG4 [details] [associations]
symbol:SCARF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048680 "positive regulation of axon regeneration"
evidence=IEA] [GO:0030169 "low-density lipoprotein particle
binding" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005044
"scavenger receptor activity" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 GO:GO:0016358
GO:GO:0016322 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 GO:GO:0048680 GO:GO:0030169
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
GeneTree:ENSGT00690000101691 OMA:GWWGPEC EMBL:FP312656
Ensembl:ENSSSCT00000032386 Uniprot:I3LNG4
Length = 834
Score = 151 (58.2 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 62/231 (26%), Positives = 92/231 (39%)
Query: 36 PNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQ--CNSEGRCQCKPGVTGDKCD-RCDV 91
P+ E +C + QK D CT C + + C G C+CKPG G +C+ RC
Sbjct: 39 PSAELQCCPGWRQK--DQECTIPICEGLDACGQDEVCVKPGLCRCKPGFFGAQCNSRCPG 96
Query: 92 NHYDFGEAGCKSCECNPAGSVKN-TPNC----DSVKGQCE-SAQLSSRGRVHTELRVQSR 145
++ G ++C C+P G + T C D +CE GR E
Sbjct: 97 QYW--GPDCRETCTCHPHGQCEPATGVCRCQPDRWGSRCEFPCACGPHGRCDPET---GA 151
Query: 146 KNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEGRCQCKPGVTGDKCD-RCDVNH- 202
+ +P W C+R P + +C+ + G C C+PG G +C RC +
Sbjct: 152 CHCEPG----WWSSTCRR---PCQCNPAA-ARCDPATGSCLCEPGWWGRRCSFRCPCHGS 203
Query: 203 ---YDFGEAGCK----SCECN-PAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
+ G C+ EC P V+ C + GQC C GA+C
Sbjct: 204 PCAQESGRCACRPGWWGPECRQPCECVRG--RCSAASGQCICPPGFRGARC 252
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 75/256 (29%), Positives = 105/256 (41%)
Query: 24 GHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLN------LQCN------ 70
G C CQ DR G CE C + + D AC+C P G + QCN
Sbjct: 120 GVCR-CQPDRWGSRCEFPCACGPHGRC-DPETGACHCEP-GWWSSTCRRPCQCNPAAARC 176
Query: 71 --SEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPA--GSVKNTPNCDSVKGQC 125
+ G C C+PG G +C RC + + + C C P G P C+ V+G+C
Sbjct: 177 DPATGSCLCEPGWWGRRCSFRCPCHGSPCAQESGR-CACRPGWWGPECRQP-CECVRGRC 234
Query: 126 ESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSE-GRC 184
+A S + R +R A R +C RD+ GH N C+++ GRC
Sbjct: 235 SAA--SGQCICPPGFR-GARCELPCAPGRYGP--QC-RDS--CGHCKQ-NEPCSADTGRC 285
Query: 185 Q-CKPGVTGDKCDR-CDVNHYDFGEA---GCKSCE----CNPAGSVKNTPNCDSVK-G-Q 233
+ C+PG G +C + C FGE+ C C C P + +CD + G +
Sbjct: 286 ESCEPGWNGTQCHQPCPPG--TFGESCRQQCPHCRLGEACQP--DTGHCQSCDPGRLGLR 341
Query: 234 CE--CKDNVEGAQCRS 247
CE C G C S
Sbjct: 342 CEDPCPTGTFGEDCGS 357
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 61/243 (25%), Positives = 84/243 (34%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSG--DNFCT-ACNCNPIGSLNLQCNSE-GRCQCKPGVTGD 84
CQ + C+ + + G C+ C C+ GS C E GRC C+PG G
Sbjct: 167 CQCNPAAARCDPATGSCLCEPGWWGRRCSFRCPCH--GS---PCAQESGRCACRPGWWGP 221
Query: 85 KC--------DRCDV-NHYDFGEAGCKSCECN-PAGSVKNTPNCDSVKGQCESAQLSSRG 134
+C RC + G + C P + P C G C+ + S
Sbjct: 222 ECRQPCECVRGRCSAASGQCICPPGFRGARCELPCAPGRYGPQCRDSCGHCKQNEPCSAD 281
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCN----------SEGRC 184
E + +P W+ +C + P G S QC G C
Sbjct: 282 TGRCE-------SCEPG----WNGTQCHQPCPPGTFGESCRQQCPHCRLGEACQPDTGHC 330
Query: 185 Q-CKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEG 242
Q C PG G +C D C FGE +C G+ CD+V G+C C G
Sbjct: 331 QSCDPGRLGLRCEDPCPTG--TFGEDCGSTCPTCVQGA------CDAVTGECVCNTGYWG 382
Query: 243 AQC 245
C
Sbjct: 383 PSC 385
>MGI|MGI:1858235 [details] [associations]
symbol:Celsr2 "cadherin, EGF LAG seven-pass G-type receptor
2 (flamingo homolog, Drosophila)" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0003341 "cilium
movement" evidence=IMP] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=IDA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IDA] [GO:0021591 "ventricular system
development" evidence=IMP] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=IDA] [GO:0022407
"regulation of cell-cell adhesion" evidence=ISO] [GO:0032880
"regulation of protein localization" evidence=IGI;IMP] [GO:0033326
"cerebrospinal fluid secretion" evidence=IGI] [GO:0042384 "cilium
assembly" evidence=IGI;IMP] [GO:0048813 "dendrite morphogenesis"
evidence=ISO] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232
PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00181 SMART:SM00208 SMART:SM00303
InterPro:IPR000152 MGI:MGI:1858235 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 GO:GO:0001764 GO:GO:0006355 GO:GO:0016055
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 GO:GO:0021591 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 OrthoDB:EOG4KKZ23
GO:GO:0021999 EMBL:AB028499 EMBL:AF031573 EMBL:BC005499
IPI:IPI00313878 IPI:IPI00850704 UniGene:Mm.39728
ProteinModelPortal:Q9R0M0 SMR:Q9R0M0 STRING:Q9R0M0 MEROPS:S63.009
PhosphoSite:Q9R0M0 PaxDb:Q9R0M0 PRIDE:Q9R0M0 InParanoid:Q9R0M0
Genevestigator:Q9R0M0 GermOnline:ENSMUSG00000068740 Uniprot:Q9R0M0
Length = 2920
Score = 156 (60.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 69/223 (30%), Positives = 92/223 (41%)
Query: 18 NRTGHGGHCLD-CQGDRDG--PNC---EKCRDN------YYQKSGDNFCTAC-------N 58
+ T G H LD +G+ P C + C N YY +++ +C N
Sbjct: 1769 SETPEGVHSLDPSRGESINVEPGCSLPDPCDSNPCPTNSYYSNDWNSYSCSCVLGYYGDN 1828
Query: 59 CNPIGSLNLQCNSEGRCQCKPGVT-GDKCDRCDVNHYD-FGEAGC-KSCECNPAGSVKNT 115
C + LN C + C KP G C+ C N+ + E + C G
Sbjct: 1829 CTNVCDLN-PCEHQSVCTRKPNTPHGYICE-CLPNYLGPYCETRIDQPCPRGWWGHPTCG 1886
Query: 116 P-NCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSL 174
P NCD KG +S G H + K++ P G+ L C D YP G SL
Sbjct: 1887 PCNCDVSKGFDPDCNKTS-GECHCK-----EKHYRPPGSPTCLL--C--DCYPTG---SL 1933
Query: 175 NLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECN 216
+ C+ E G+C CKPGV G +CDRCD N F E CE N
Sbjct: 1934 SRVCDPEDGQCPCKPGVIGRQCDRCD-N--PFAEVTTNGCEVN 1973
Score = 126 (49.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 55/179 (30%), Positives = 70/179 (39%)
Query: 78 KPGVT-GDKCDR--CDVNHYDFGEAGCKSCECNPAGSVKNTPN-CDSVKGQCESAQLSSR 133
+PG + D CD C N Y + SC C N N CD CE + +R
Sbjct: 1789 EPGCSLPDPCDSNPCPTNSYYSNDWNSYSCSCVLGYYGDNCTNVCDL--NPCEHQSVCTR 1846
Query: 134 --GRVHTELRVQSRKNF-DP-AGNRIWDLRRCKRDTYPLGHGGSLNLQCN-SEG-RCQCK 187
H + + N+ P RI D + C R + GH C+ S+G C
Sbjct: 1847 KPNTPHGYI-CECLPNYLGPYCETRI-D-QPCPRGWW--GHPTCGPCNCDVSKGFDPDCN 1901
Query: 188 PGVTGDKCDRCDVNHY-DFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
T +C C HY G C C+C P GS+ CD GQC CK V G QC
Sbjct: 1902 K--TSGEC-HCKEKHYRPPGSPTCLLCDCYPTGSLSRV--CDPEDGQCPCKPGVIGRQC 1955
Score = 47 (21.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/64 (32%), Positives = 28/64 (43%)
Query: 19 RTGHGGH-CLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS-LNLQCNSEGRCQ 76
R+ GG+ CL C+G G +CE SG CT C G+ +NL +C
Sbjct: 1305 RSREGGYTCL-CRGCYTGEHCEASTH-----SGR--CTPGVCKNGGTCVNLLVGGI-KCD 1355
Query: 77 CKPG 80
C G
Sbjct: 1356 CPSG 1359
Score = 40 (19.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 54 CTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKC 86
C + C+ G+ Q N+ C+C G G C
Sbjct: 1579 CDSSICHNGGTCVNQWNTFS-CECPLGFGGKSC 1610
>ZFIN|ZDB-GENE-060503-252 [details] [associations]
symbol:megf11 "multiple EGF-like-domains 11"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR007527
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS50966 PROSITE:PS51041
SMART:SM00181 ZFIN:ZDB-GENE-060503-252 GO:GO:0008270
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:BX890618
EMBL:BX908395 EMBL:CR788229 IPI:IPI00785724
Ensembl:ENSDART00000090855 Uniprot:F1Q4V3
Length = 1114
Score = 152 (58.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 67/250 (26%), Positives = 97/250 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G C C G +C+ C ++ G N C+C GS C+ E G C C PG
Sbjct: 555 GLCR-CLPGWTGIHCDSICPQGFW---GSNCSMTCSCQNGGS----CSPEDGTCVCAPGY 606
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSC-EC-NPAGSVKN-TPNCDSVKG----QCESAQLSSR 133
G C R C Y G + C +C + G + T +C+ + G C S +
Sbjct: 607 RGTSCKRICPPGFY--GHRCSQLCPQCVHSTGPCHHVTGHCECLAGFFGSLCNQVCPSGK 664
Query: 134 -GRVHTELRVQSRKNF-DPAGNRI-----WDLRRCKRDTYPLGHGGS--LN-------LQ 177
G+ E+ + + +P W C + P+G G LN Q
Sbjct: 665 FGKACAEICLCTNNGTCNPIDGSCQCFPGWTGDDCSQ-ICPIGQWGPDCLNSCNCHNGAQ 723
Query: 178 CNS-EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCE 235
C++ +G C+C G TG C RC Y G + C C +N +CD + GQC
Sbjct: 724 CSAYDGECRCSLGWTGLYCTQRCPSGFY--GRDCAEVCRC------QNGADCDHITGQCA 775
Query: 236 CKDNVEGAQC 245
C+ G C
Sbjct: 776 CRTGFIGTNC 785
Score = 143 (55.4 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 73/278 (26%), Positives = 102/278 (36%)
Query: 1 CNCNGFSNRCFFDKELYN--RTGH-GGHCLDCQGDRDGPNCEK--CRDNYYQKSGDNFCT 55
C + +C + N + H G CL C G +C+ C Y D +C
Sbjct: 311 CPVGTYGPQCTLHCDCQNGAKCYHINGACL-CDTGFKGHHCQDRFCPPGLYGLICDKYCP 369
Query: 56 ACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCK-SCEC-NPAGS 111
CN +++ C+ G C C G TG C+ C +Y GE GC C+C N A
Sbjct: 370 ---CNSTNTIS--CHPLTGECSCTAGWTGLYCNETCPPGYY--GE-GCGVPCQCANGADC 421
Query: 112 VKNTPNCDSVKGQC--ESAQLSSRGRVHTEL----RVQSRKNFDPA-GNRI----W---D 157
T C G + +Q G T ++ + P G+ I W D
Sbjct: 422 HSLTGACICAPGYTGDDCSQTCPSGLFGTNCTSICHCHNQASCSPIDGSCICKEGWQGVD 481
Query: 158 LR-RCKRDTYPLGHGGSL----NLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGC 210
C T+ LG + C+ +G C C G G++C + C Y E C
Sbjct: 482 CSILCSSGTWGLGCNQTCLCANGAACDPIDGSCTCSSGWRGERCQQPCPDGTY---ELEC 538
Query: 211 KS-CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCRS 247
+ C+CN A CD V G C C G C S
Sbjct: 539 RERCDCNHADG------CDHVSGLCRCLPGWTGIHCDS 570
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 62/207 (29%), Positives = 84/207 (40%)
Query: 46 YQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKS 103
+ K G N C+C G L C+ G+CQC G +G +C + C V Y G
Sbjct: 270 FGKYGINCSKECSCRN-GGL---CDHITGQCQCMAGYSGHRCQEECPVGTY--GPQCTLH 323
Query: 104 CECNPAGSVKNTPNCDSVKGQCESAQLSSRG-RVHTELRVQSRKNFDPAGNRIWDLRRCK 162
C+C +N C + G C L G + H Q R F P G ++ L C
Sbjct: 324 CDC------QNGAKCYHINGAC----LCDTGFKGH---HCQDR--FCPPG--LYGLI-C- 364
Query: 163 RDTY-PLGHGGSLNLQCNS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCK-SCECNPA 218
D Y P +++ C+ G C C G TG C+ C +Y GE GC C+C
Sbjct: 365 -DKYCPCNSTNTIS--CHPLTGECSCTAGWTGLYCNETCPPGYY--GE-GCGVPCQC--- 415
Query: 219 GSVKNTPNCDSVKGQCECKDNVEGAQC 245
N +C S+ G C C G C
Sbjct: 416 ---ANGADCHSLTGACICAPGYTGDDC 439
Score = 135 (52.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 66/248 (26%), Positives = 86/248 (34%)
Query: 24 GHCLDCQGDRDGPNC-EKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C C G C E C YY G+ C C + C+S G C C PG
Sbjct: 383 GEC-SCTAGWTGLYCNETCPPGYY---GEGCGVPCQC----ANGADCHSLTGACICAPGY 434
Query: 82 TGDKCDRCDVNHYDFGEAGCKS-CEC-NPAGSVKNTPNCDSVKGQ--CESAQLSSRGR-- 135
TGD C + + FG C S C C N A +C +G + + L S G
Sbjct: 435 TGDDCSQTCPSGL-FG-TNCTSICHCHNQASCSPIDGSCICKEGWQGVDCSILCSSGTWG 492
Query: 136 --VHTELRVQSRKNFDPAGNRI-----WDLRRCKRD----TYPLGHGGSLNLQ----CNS 180
+ + DP W RC++ TY L + C+
Sbjct: 493 LGCNQTCLCANGAACDPIDGSCTCSSGWRGERCQQPCPDGTYELECRERCDCNHADGCDH 552
Query: 181 -EGRCQCKPGVTGDKCDRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCECKD 238
G C+C PG TG CD + F + C +C C GS C G C C
Sbjct: 553 VSGLCRCLPGWTGIHCD--SICPQGFWGSNCSMTCSCQNGGS------CSPEDGTCVCAP 604
Query: 239 NVEGAQCR 246
G C+
Sbjct: 605 GYRGTSCK 612
Score = 100 (40.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 182 GRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCECKDN 239
G+C C+ G G C+ +C + +G C+ CEC N CD V G C C
Sbjct: 772 GQCACRTGFIGTNCEQKCPPGTFGYG---CQQLCEC------MNNATCDYVTGTCYCSPG 822
Query: 240 VEGAQC 245
+G +C
Sbjct: 823 YKGIRC 828
Score = 99 (39.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/82 (30%), Positives = 34/82 (41%)
Query: 167 PLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGC-KSCECNPAGSVKNT 224
P +GG+ + + G C C G TG C + C Y C K C C G
Sbjct: 239 PCQNGGTCH---HITGECSCPAGWTGSVCAQPCPFGKYGIN---CSKECSCRNGGL---- 288
Query: 225 PNCDSVKGQCECKDNVEGAQCR 246
CD + GQC+C G +C+
Sbjct: 289 --CDHITGQCQCMAGYSGHRCQ 308
Score = 79 (32.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/87 (28%), Positives = 38/87 (43%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGE 98
+C Y++ SGD C C+ + +C S CQC+PG G C C+ ++ G
Sbjct: 93 QCCPGYFE-SGD-LCVP-RCSE-ECAHGRCVSPDTCQCEPGWGGLDCSSGCESGYW--GP 146
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQC 125
C+C KN C+ + G C
Sbjct: 147 HCSNRCQC------KNGALCNPITGAC 167
>RGD|1565197 [details] [associations]
symbol:Ntn5 "netrin 5" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 RGD:1565197 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OrthoDB:EOG402WS1
IPI:IPI00367517 Ensembl:ENSRNOT00000028524 UCSC:RGD:1565197
Uniprot:D3ZT86
Length = 448
Score = 147 (56.8 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 42/158 (26%), Positives = 65/158 (41%)
Query: 1 CNCNGFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNY----YQKSGDNF--- 53
C C+G + RC C C+ GP CE CR ++ ++ +
Sbjct: 173 CQCHGHAARCA-------ARAQPPRCR-CRHHTTGPGCESCRPSHRDWPWRPATPQHPHP 224
Query: 54 CTACNCNPIGSLNLQCN-SEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGS- 111
C C C+PIG+ CN + G+C CK GVTG C+ C Y + C+ P +
Sbjct: 225 CLPCQCHPIGATGGMCNQTSGQCSCKLGVTGLTCNHCGPG-YQQSRSPRMPCQRIPEATT 283
Query: 112 -VKNTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNF 148
+ TP QC+ S VH L+ ++++
Sbjct: 284 ALATTPVASRSDPQCQGYCNVSVSSVHMNLQKYCQQDY 321
Score = 113 (44.8 bits), Expect = 0.00064, P = 0.00064
Identities = 25/85 (29%), Positives = 37/85 (43%)
Query: 170 HGGSLNLQCNSEG-RCQCKPGVTGDKCDRCDVNHYDFG--------EAGCKSCECNPAGS 220
HG + ++ RC+C+ TG C+ C +H D+ C C+C+P G+
Sbjct: 176 HGHAARCAARAQPPRCRCRHHTTGPGCESCRPSHRDWPWRPATPQHPHPCLPCQCHPIGA 235
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
C+ GQC CK V G C
Sbjct: 236 TGGM--CNQTSGQCSCKLGVTGLTC 258
>UNIPROTKB|F1MHH5 [details] [associations]
symbol:CELSR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00181 SMART:SM00303 GO:GO:0016021 GO:GO:0005886
GO:GO:0001764 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:DGRRVDM
EMBL:DAAA02054431 IPI:IPI00728856 Ensembl:ENSBTAT00000029126
Uniprot:F1MHH5
Length = 3300
Score = 156 (60.0 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 36/116 (31%), Positives = 54/116 (46%)
Query: 1 CNCNG--FSNRCFFDKELYNRTGHGGH--CLDCQGD-RDG--PNCEK------CRDNYYQ 47
C+C G F + C + G G C C D G PNC K C++ +Y+
Sbjct: 1990 CDCVGGYFGHHCEHRMDQQCPRGWWGSPTCGPCNCDVHKGFDPNCNKTDGQCHCKEFHYR 2049
Query: 48 KSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 102
G + C C+C P+GS + C G+C C+PG G +C+ CD + +GC+
Sbjct: 2050 PRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPGALGRQCNSCDSPFAEVTASGCR 2105
>UNIPROTKB|Q9NYQ7 [details] [associations]
symbol:CELSR3 "Cadherin EGF LAG seven-pass G-type receptor
3" species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0007413 "axonal fasciculation"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000203 InterPro:IPR000742 InterPro:IPR000832
InterPro:IPR001879 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR017983 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF01825 Pfam:PF02793
PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00649
PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00181 SMART:SM00303 GO:GO:0016021 GO:GO:0005886
GO:GO:0001764 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210 HOGENOM:HOG000231346
HOVERGEN:HBG050887 EMBL:AF231023 EMBL:AC121252 EMBL:AB011536
IPI:IPI00015345 IPI:IPI00798152 PIR:T00250 RefSeq:NP_001398.2
UniGene:Hs.631926 ProteinModelPortal:Q9NYQ7 SMR:Q9NYQ7
IntAct:Q9NYQ7 MINT:MINT-1381104 STRING:Q9NYQ7 PhosphoSite:Q9NYQ7
DMDM:229462826 PaxDb:Q9NYQ7 PRIDE:Q9NYQ7 Ensembl:ENST00000164024
Ensembl:ENST00000544264 GeneID:1951 KEGG:hsa:1951 UCSC:uc003cul.3
CTD:1951 GeneCards:GC03M048673 H-InvDB:HIX0200467 HGNC:HGNC:3230
MIM:604264 neXtProt:NX_Q9NYQ7 PharmGKB:PA26395 KO:K04602
OMA:DGRRVDM OrthoDB:EOG4C87RG PhylomeDB:Q9NYQ7 ChiTaRS:CELSR3
GenomeRNAi:1951 NextBio:7907 ArrayExpress:Q9NYQ7 Bgee:Q9NYQ7
CleanEx:HS_CELSR3 Genevestigator:Q9NYQ7 GermOnline:ENSG00000008300
Uniprot:Q9NYQ7
Length = 3312
Score = 156 (60.0 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 36/116 (31%), Positives = 54/116 (46%)
Query: 1 CNCNG--FSNRCFFDKELYNRTGHGGH--CLDCQGD-RDG--PNCEK------CRDNYYQ 47
C+C G F + C + G G C C D G PNC K C++ +Y+
Sbjct: 2008 CDCVGGYFGHHCEHRMDQQCPRGWWGSPTCGPCNCDVHKGFDPNCNKTNGQCHCKEFHYR 2067
Query: 48 KSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 102
G + C C+C P+GS + C G+C C+PG G +C+ CD + +GC+
Sbjct: 2068 PRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPGALGRQCNSCDSPFAEVTASGCR 2123
>UNIPROTKB|F1LX88 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 IPI:IPI00559428 ProteinModelPortal:F1LX88
Ensembl:ENSRNOT00000043455 ArrayExpress:F1LX88 Uniprot:F1LX88
Length = 401
Score = 146 (56.5 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 45/154 (29%), Positives = 61/154 (39%)
Query: 1 CNCNGFSNRCFFDK-ELYNRTGH---GGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTA 56
C CN + C +D +L H G C C+ + G K N C
Sbjct: 215 CKCNLHATMCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIP 274
Query: 57 -------CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC-DVNHYDFG--EAGCKS--C 104
C CNP+GS++ +CN G C+CK G TG KCD C N + +G C +
Sbjct: 275 SISSIGKCYCNPLGSIHDRCNGSGFCECKTGTTGPKCDECLPGNSWYYGCQPNVCDNELL 334
Query: 105 ECNPAGSVKNTPNC---DSVKG-QCESAQLSSRG 134
C G+ N C D+ G CE + G
Sbjct: 335 HCQNGGTCHNNVRCVCPDAYTGILCEKLRCEEAG 368
Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
Identities = 27/76 (35%), Positives = 37/76 (48%)
Query: 172 GSLNLQCNSEGRCQCKPGVTGDKCDRC-DVNHYDFGEAGCKSCEC-NPAGSVKNTPNCDS 229
GS++ +CN G C+CK G TG KCD C N + +G C+ C N +N C +
Sbjct: 288 GSIHDRCNGSGFCECKTGTTGPKCDECLPGNSWYYG---CQPNVCDNELLHCQNGGTCHN 344
Query: 230 VKGQCECKDNVEGAQC 245
+C C D G C
Sbjct: 345 -NVRCVCPDAYTGILC 359
>RGD|1305653 [details] [associations]
symbol:Pear1 "platelet endothelial aggregation receptor 1"
species:10116 "Rattus norvegicus" [GO:0001891 "phagocytic cup"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0043654 "recognition of
apoptotic cell" evidence=IEA;ISO] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
RGD:1305653 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 OMA:PPGTWGF
IPI:IPI00914278 Ensembl:ENSRNOT00000019502 UCSC:RGD:1305653
ArrayExpress:E9PTZ1 Uniprot:E9PTZ1
Length = 1033
Score = 151 (58.2 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 73/250 (29%), Positives = 96/250 (38%)
Query: 24 GHCLDCQGDRDGPNCEK--CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
G CL C+ G C + C D Y S + CT C+P SL+ C+ G C C+PG
Sbjct: 330 GACL-CEHGFTGDRCTERLCPDGRYGLSCQDPCT---CDPEHSLS--CHPMHGECSCQPG 383
Query: 81 VTGDKCDR-CDVNHYDFGEAGCKS-CECNPAG-SVKNTPNCDSVKGQC--ESAQL---SS 132
G C+ C D AGC+ C C G + ++ C G A L ++
Sbjct: 384 WAGLHCNESCP---QDTHGAGCQEHCLCLHGGVCLADSGLCRCAPGYTGPHCANLCPPNT 440
Query: 133 RG-RVHTELRVQSRKNFDPA-GNRI----WDLRRCKRDTYPLGHGGSLNL--QCNSEG-- 182
G + ++ P G I W C P G S N QC EG
Sbjct: 441 YGINCSSHCSCENAIACSPVDGTCICKEGWQRGNCSVPCPPGTWGFSCNASCQCAHEGVC 500
Query: 183 -----RCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCE 235
C C PG G C C FGE GC S C+C+ ++ CD V G C
Sbjct: 501 SPQTGACTCTPGWRGVHCQLPCPKGQ--FGE-GCASVCDCD------HSDGCDPVHGHCR 551
Query: 236 CKDNVEGAQC 245
C+ G +C
Sbjct: 552 CQAGWMGTRC 561
Score = 136 (52.9 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 67/241 (27%), Positives = 88/241 (36%)
Query: 26 CLD-CQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTG 83
CL C GP C+ C + Y S D AC C P G CN C G G
Sbjct: 172 CLQPCPDGHYGPACQFDC--HCYGASCDPRDGACFCPP-GRTGPSCN----VPCSQGTDG 224
Query: 84 DKCDR---CDVNHYDFGEAGCKSCECNPA--GSVKNTPNCDSVKG-QCESAQLSSRGRVH 137
C R C G G SC C P G + + P + G C G +
Sbjct: 225 FFCPRTYPCQNGGVPQGSQG--SCSCPPGWMGVICSLPCPEGFHGPNCTQECRCHNGGLC 282
Query: 138 TELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG---------SLNLQC-NSEGRCQCK 187
Q A I D RC R+ P+G G + +C + G C C+
Sbjct: 283 DRFTGQCHC----APGYIGD--RC-REECPVGRFGQDCAETCDCAPGARCFPANGACLCE 335
Query: 188 PGVTGDKC-DR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
G TGD+C +R C Y C+ C C+P S+ +C + G+C C+ G
Sbjct: 336 HGFTGDRCTERLCPDGRYGLS---CQDPCTCDPEHSL----SCHPMHGECSCQPGWAGLH 388
Query: 245 C 245
C
Sbjct: 389 C 389
Score = 104 (41.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 29/87 (33%), Positives = 36/87 (41%)
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAG 219
C R TYP +GG + S+G C C PG G C C + G + C C+ G
Sbjct: 227 CPR-TYPCQNGG---VPQGSQGSCSCPPGWMGVICSLPCPEGFH--GPNCTQECRCHNGG 280
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQCR 246
CD GQC C G +CR
Sbjct: 281 L------CDRFTGQCHCAPGYIGDRCR 301
Score = 82 (33.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/87 (29%), Positives = 36/87 (41%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYDFGE 98
+C YY+ SG C C ++ +C + RCQC PG GD C C + G
Sbjct: 87 QCCGGYYESSGA--CVPL-CAQ-ECVHGRCVAPNRCQCAPGWRGDDCSSECAPGMW--GP 140
Query: 99 AGCKSCECNPAGSVKNTPNCDSVKGQC 125
+ C C N+ +CD G C
Sbjct: 141 QCDRLCLCG------NSSSCDPRSGVC 161
>MGI|MGI:1920432 [details] [associations]
symbol:Pear1 "platelet endothelial aggregation receptor 1"
species:10090 "Mus musculus" [GO:0001891 "phagocytic cup"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0043654 "recognition of apoptotic cell" evidence=IMP;IDA]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 MGI:MGI:1920432 GO:GO:0016021
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 HOGENOM:HOG000294130
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 HSSP:P01132
HOVERGEN:HBG108333 CTD:375033 eggNOG:NOG320509 OMA:PPGTWGF
OrthoDB:EOG451DPW EMBL:AF461685 EMBL:AF444274 EMBL:AF440279
EMBL:AK141082 EMBL:AK053551 EMBL:BC042490 EMBL:AK131151
IPI:IPI00283616 IPI:IPI00874618 IPI:IPI00874792 IPI:IPI00874938
RefSeq:NP_001027585.1 RefSeq:NP_001027586.1 RefSeq:NP_082736.1
RefSeq:NP_690012.2 UniGene:Mm.158962 ProteinModelPortal:Q8VIK5
SMR:Q8VIK5 STRING:Q8VIK5 PhosphoSite:Q8VIK5 PaxDb:Q8VIK5
PRIDE:Q8VIK5 Ensembl:ENSMUST00000029714 Ensembl:ENSMUST00000079083
Ensembl:ENSMUST00000090981 Ensembl:ENSMUST00000172621
Ensembl:ENSMUST00000174759 GeneID:73182 KEGG:mmu:73182
UCSC:uc008psq.1 UCSC:uc008psu.1 InParanoid:Q8VIK5 ChiTaRS:PEAR1
NextBio:337625 Bgee:Q8VIK5 CleanEx:MM_PEAR1 Genevestigator:Q8VIK5
Uniprot:Q8VIK5
Length = 1034
Score = 151 (58.2 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 75/259 (28%), Positives = 95/259 (36%)
Query: 10 CFFDKELYN-RTGHGG-HCLD-CQGDRDGPNCE-KCR-DNYYQKSG-DNFCTAC------ 57
C D L G+ G HC + C D G NC +C +N S D C C
Sbjct: 414 CLADSGLCRCAPGYTGPHCANLCPPDTYGINCSSRCSCENAIACSPIDGTCI-CKEGWQR 472
Query: 58 -NCN---PIGSLNLQCNSEGRCQCK-PGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSV 112
NC+ P+G+ CN+ CQC GV + C G A C+ C P G
Sbjct: 473 GNCSVPCPLGTWGFNCNAS--CQCAHDGVCSPQTGACTCTPGWHG-AHCQ-LPC-PKGQF 527
Query: 113 KNTPNCDSVKGQCESAQLSSRGRVHTELRVQS----RKNFDPAGNRIWDLRRCKRDTYPL 168
C SV C+ VH + R Q+ + P W C +T
Sbjct: 528 GE--GCASV---CDCDHSDGCDPVHGQCRCQAGWMGTRCHLPCPEGFWGAN-CS-NTCTC 580
Query: 169 GHGGSLNLQCNSE-GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPN 226
+GG+ C SE G C C PG G C R C Y G+ C C+CN N +
Sbjct: 581 KNGGT----CVSENGNCVCAPGFRGPSCQRPCPPGRY--GKR-CVQCKCN-----NNHSS 628
Query: 227 CDSVKGQCECKDNVEGAQC 245
C G C C G C
Sbjct: 629 CHPSDGTCSCLAGWTGPDC 647
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 71/251 (28%), Positives = 92/251 (36%)
Query: 24 GHCLDCQGDRDGPNCEK--CRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPG 80
G CL C+ G C + C D Y S CT C+P SL+ C+ G C C+PG
Sbjct: 330 GACL-CEHGFTGDRCTERLCPDGRYGLSCQEPCT---CDPEHSLS--CHPMHGECSCQPG 383
Query: 81 VTGDKCDR-CDVNHYDFGEAGCKS-CECNPAG-SVKNTPNCDSVKG----QCESAQLSSR 133
G C+ C D GC+ C C G + ++ C G C +
Sbjct: 384 WAGLHCNESCP---QDTHGPGCQEHCLCLHGGLCLADSGLCRCAPGYTGPHCANLCPPDT 440
Query: 134 GRVHTELRVQSRKNF--DPA-GNRI----WDLRRCKRDTYPLGHGG-SLNLQCN------ 179
++ R P G I W C PLG G + N C
Sbjct: 441 YGINCSSRCSCENAIACSPIDGTCICKEGWQRGNCSVPC-PLGTWGFNCNASCQCAHDGV 499
Query: 180 ---SEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQC 234
G C C PG G C C FGE GC S C+C+ ++ CD V GQC
Sbjct: 500 CSPQTGACTCTPGWHGAHCQLPCPKGQ--FGE-GCASVCDCD------HSDGCDPVHGQC 550
Query: 235 ECKDNVEGAQC 245
C+ G +C
Sbjct: 551 RCQAGWMGTRC 561
Score = 138 (53.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 71/265 (26%), Positives = 96/265 (36%)
Query: 2 NCNGFSNRCFFDKELYNRTGHGGHCLD-CQGDRDGPNCE-KCRDNYYQKSGDNFCTACNC 59
+C+ S CF L +CL C GP C+ C+ Y S D AC C
Sbjct: 153 SCDPKSGTCFCPSGL-----QPPNCLQPCPAGHYGPACQFDCQ--CYGASCDPQDGACFC 205
Query: 60 NPIGSLNLQCNSEGRCQCKPGVTGDKCDR---CDVNHYDFGEAGCKSCECNPA--GSVKN 114
P G CN C G G C R C G G SC C P G + +
Sbjct: 206 PP-GRAGPSCN----VPCSQGTDGFFCPRTYPCQNGGVPQGSQG--SCSCPPGWMGVICS 258
Query: 115 TPNCDSVKG-QCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGG- 172
P + G C G + Q A I D RC+ + P+G G
Sbjct: 259 LPCPEGFHGPNCTQECRCHNGGLCDRFTGQCHC----APGYIGD--RCQEEC-PVGRFGQ 311
Query: 173 --------SLNLQC-NSEGRCQCKPGVTGDKC-DR-CDVNHYDFGEAGCKS-CECNPAGS 220
+ +C + G C C+ G TGD+C +R C Y C+ C C+P S
Sbjct: 312 DCAETCDCAPGARCFPANGACLCEHGFTGDRCTERLCPDGRYGLS---CQEPCTCDPEHS 368
Query: 221 VKNTPNCDSVKGQCECKDNVEGAQC 245
+ +C + G+C C+ G C
Sbjct: 369 L----SCHPMHGECSCQPGWAGLHC 389
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 67/269 (24%), Positives = 91/269 (33%)
Query: 2 NCNGFSNRCFFDKELYNRTG--------HGGHC-LDCQGDRDGPNCEKCRDNYYQKSGDN 52
NCN S +C D +TG HG HC L C + G C D + D
Sbjct: 487 NCNA-SCQCAHDGVCSPQTGACTCTPGWHGAHCQLPCPKGQFGEGCASVCDCDHSDGCDP 545
Query: 53 FCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPA-- 109
C C G + +C+ C G G C C + + +C C P
Sbjct: 546 VHGQCRCQA-GWMGTRCH----LPCPEGFWGANCSNTCTCKNGGTCVSENGNCVCAPGFR 600
Query: 110 GSVKNTPNCDSVKGQ-CESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPL 168
G P G+ C + ++ H+ AG W C + P
Sbjct: 601 GPSCQRPCPPGRYGKRCVQCKCNNN---HSSCHPSDGTCSCLAG---WTGPDCS-EACPP 653
Query: 169 GHGG---SLNLQCN-------SEGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECNP 217
GH G S QC+ +G C C PG TG C + C FG + C+C+
Sbjct: 654 GHWGLKCSQLCQCHHGGTCHPQDGSCICTPGWTGPNCLEGCPPRM--FGVNCSQLCQCD- 710
Query: 218 AGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G + C G C C GA C+
Sbjct: 711 LGEM-----CHPETGACVCPPGHSGADCK 734
Score = 100 (40.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 28/87 (32%), Positives = 36/87 (41%)
Query: 161 CKRDTYPLGHGGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAG 219
C R TYP +GG + S+G C C PG G C C + G + C C+ G
Sbjct: 227 CPR-TYPCQNGG---VPQGSQGSCSCPPGWMGVICSLPCPEGFH--GPNCTQECRCHNGG 280
Query: 220 SVKNTPNCDSVKGQCECKDNVEGAQCR 246
CD GQC C G +C+
Sbjct: 281 L------CDRFTGQCHCAPGYIGDRCQ 301
Score = 79 (32.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 33/111 (29%), Positives = 44/111 (39%)
Query: 24 GHCL---DCQ---GDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQ 76
G C+ CQ G R G +C + D FC +C G+ N C+ + G C
Sbjct: 110 GRCVAPNQCQCAPGWRGGDCSSECAPGMWGPQCDKFC---HC---GN-NSSCDPKSGTCF 162
Query: 77 CKPGVTGDKC-DRCDVNHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQC 125
C G+ C C HY G A C+ C+C A +CD G C
Sbjct: 163 CPSGLQPPNCLQPCPAGHY--GPA-CQFDCQCYGA-------SCDPQDGAC 203
Score = 77 (32.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 26/91 (28%), Positives = 35/91 (38%)
Query: 36 PNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHY 94
P + CR YY+ G C C ++ +C + +CQC PG G C C +
Sbjct: 84 PRLQCCR-GYYESRGA--CVPL-CAQ-ECVHGRCVAPNQCQCAPGWRGGDCSSECAPGMW 138
Query: 95 DFGEAGCKSCECNPAGSVKNTPNCDSVKGQC 125
G K C C N +CD G C
Sbjct: 139 --GPQCDKFCHCG------NNSSCDPKSGTC 161
>RGD|1582797 [details] [associations]
symbol:Megf11 "multiple EGF-like-domains 11" species:10116
"Rattus norvegicus" [GO:0010842 "retina layer formation"
evidence=ISO] [GO:0034109 "homotypic cell-cell adhesion"
evidence=ISO] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 RGD:1582797 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS50027 Pfam:PF12661
GeneTree:ENSGT00690000101691 IPI:IPI00959176
Ensembl:ENSRNOT00000050649 Uniprot:F1M370
Length = 1094
Score = 151 (58.2 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 64/232 (27%), Positives = 91/232 (39%)
Query: 40 KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCDR-CDVNHYDFGE 98
+C YY+ +GD FC C ++ +C S C C+PG G C CD H+ G
Sbjct: 85 QCCPGYYE-NGD-FCIPL-CTE-ECMHGRCVSPDTCHCEPGWGGPDCSSGCDSEHW--GP 138
Query: 99 AGCKSCECNPAGSVKN--TPNCDSVKG----QCES-AQLSSRGRVHTELRVQSRK--NFD 149
C+C G++ N T C G +CE + G+ +L Q + D
Sbjct: 139 HCSNRCQCQN-GALCNPITGACVCAPGFRGWRCEEFCAPGTHGK-GCQLLCQCHHGASCD 196
Query: 150 P-AGNRI----WDLRRCKRDTYPLGHGGSLNLQCNSE---------GRCQCKPGVTGDKC 195
P G + + C+ P HG L+C + G C C PG TG C
Sbjct: 197 PRTGECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVC 256
Query: 196 DR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
+ C FG+ + C C+ G CD V GQC C G +C+
Sbjct: 257 AQPCPPG--TFGQNCSQDCPCHHGGQ------CDHVTGQCHCTAGYMGDRCQ 300
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 58/242 (23%), Positives = 83/242 (34%)
Query: 23 GGHCLD-CQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGV 81
G C C G NC + ++ D+ C+C G + +C E C G
Sbjct: 253 GAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHCTA-GYMGDRCQEE----CPFGT 307
Query: 82 TGDKCD-RCDVNHYDFGEAGCKSCECNPA--GSVKNTPNC-DSVKGQ-CES-AQLSSRGR 135
G +C RCD ++ +CEC P G C + + G C S +
Sbjct: 308 FGFRCSQRCDCHNGGQCSPATGACECEPGYKGPSCQERLCPEGLHGPGCTSPCPCDTENT 367
Query: 136 VHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGH-GGSLNLQCNSE---------GRCQ 185
+ V P W C ++ P G+ G L C + G C
Sbjct: 368 ISCH-PVTGACTCQPG----WSGHYCN-ESCPAGYYGNGCQLPCTCQNGADCHSITGSCT 421
Query: 186 CKPGVTGDKCD-RCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C PG G+ C C Y C S C C+ G+ C V G C C++ +G
Sbjct: 422 CAPGFMGEVCAVPCAAGTYG---PNCSSVCSCSNGGT------CSPVDGSCTCREGWQGL 472
Query: 244 QC 245
C
Sbjct: 473 DC 474
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 67/249 (26%), Positives = 94/249 (37%)
Query: 24 GHCLDCQGDRDGPNCE-KCRDNYYQKSGDNFCTACNCNPIGSLNLQCNS-EGRCQCKPGV 81
G C C G +CE C D + G N C+C+ C+ G C C G
Sbjct: 504 GSCA-CTPGWLGDSCELPCPDGTF---GLNCSEHCDCSHADG----CDPVTGHCCCLAGW 555
Query: 82 TGDKCDR-CDVNHYDFG-EAGCKSCE----CNPA-GSVKNTPN-----CDSV-------K 122
TG +CD C + C SCE C+P GS + P C +
Sbjct: 556 TGIRCDSTCPPGRWGPNCSVSC-SCENGGSCSPVDGSCECAPGFRGPLCQRICPPGFYGH 614
Query: 123 GQCESAQLS--SRGRVHTELRV-QSRKNFDPA-GNRIWDLRRCKRDTYPLGHGGSLNLQC 178
G + L SRG H + + F A N++ +D L + N C
Sbjct: 615 GCAQPCPLCVHSRGPCHHVSGICECLPGFSGALCNQVCAGGHFGQDCAQLCSCAN-NGTC 673
Query: 179 NS-EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
+ +G CQC PG TG C + C FG+ C+C +N +CD + G+C C
Sbjct: 674 SPIDGSCQCFPGWTGKDCSQGCPAAF--FGKDCGHICQC------QNGASCDHITGKCTC 725
Query: 237 KDNVEGAQC 245
+ G C
Sbjct: 726 RTGFSGRHC 734
Score = 118 (46.6 bits), Expect = 0.00056, P = 0.00056
Identities = 28/90 (31%), Positives = 40/90 (44%)
Query: 159 RRCKRDTYPLGHGGSLNLQCNS-EGRCQCKPGVTGDKC-DRCDVNHYDFGEAGCKSCECN 216
+ C +D P HGG QC+ G+C C G GD+C + C FG + C+C+
Sbjct: 267 QNCSQDC-PCHHGG----QCDHVTGQCHCTAGYMGDRCQEECPFG--TFGFRCSQRCDCH 319
Query: 217 PAGSVKNTPNCDSVKGQCECKDNVEGAQCR 246
G C G CEC+ +G C+
Sbjct: 320 NGGQ------CSPATGACECEPGYKGPSCQ 343
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 63/243 (25%), Positives = 83/243 (34%)
Query: 23 GGHCLD--CQGDRDGPNCEK-CR-DNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCK 78
G C + C GP C C D S AC C P G CN C
Sbjct: 339 GPSCQERLCPEGLHGPGCTSPCPCDTENTISCHPVTGACTCQP-GWSGHYCNES----CP 393
Query: 79 PGVTGDKCDR-CDVNHYDFGEAGCKSCECNPA--GSVKNTPNCDSVKG-QCESAQLSSRG 134
G G+ C C + + SC C P G V P G C S S G
Sbjct: 394 AGYYGNGCQLPCTCQNGADCHSITGSCTCAPGFMGEVCAVPCAAGTYGPNCSSVCSCSNG 453
Query: 135 RVHTEL--RVQSRKNFD------PAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS-EGRCQ 185
+ + R+ + P + W L C ++ +G + C+ +G C
Sbjct: 454 GTCSPVDGSCTCREGWQGLDCSLPCPSGTWGLN-CN-ESCVCANGAA----CSPFDGSCA 507
Query: 186 CKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQ 244
C PG GD C+ C FG + C+C+ A CD V G C C G +
Sbjct: 508 CTPGWLGDSCELPCPDG--TFGLNCSEHCDCSHADG------CDPVTGHCCCLAGWTGIR 559
Query: 245 CRS 247
C S
Sbjct: 560 CDS 562
>ZFIN|ZDB-GENE-090312-12 [details] [associations]
symbol:megf6a "multiple EGF-like-domains 6a"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-090312-12 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
PROSITE:PS50027 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 EMBL:CR354562 EMBL:CT027543
EMBL:CT027552 IPI:IPI00901902 ProteinModelPortal:E7FFP9
Ensembl:ENSDART00000112424 Bgee:E7FFP9 Uniprot:E7FFP9
Length = 1513
Score = 152 (58.6 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 61/243 (25%), Positives = 93/243 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCN-----SEGRCQ- 76
G C+ C+ + G +C K C + ++ ++ D C N +L C+ + C+
Sbjct: 1268 GRCV-CRAGQRGRDCGKGCAEGWFGENCDQRCNCSNGGVCDALTGHCSCTLGWTGDTCEE 1326
Query: 77 -CKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQLSSRG 134
C G G C CD + + C C+P + V QL
Sbjct: 1327 VCPRGRYGSDCSEVCDCKNNSTCDRVTGVCLCSPGFYGHLCQHACPVGFHGHRCQLLCDC 1386
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS---LNLQCNSE-------GRC 184
+ ++ + PAG + RC+R+ LG G+ C+ + GRC
Sbjct: 1387 GANAPCDPETGRCLCPAG---YQGLRCEREC-ELGTFGADCVHRCDCDGDTPCDPINGRC 1442
Query: 185 QCKPGVTGDKCD-RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGA 243
C PG TG +CD C VN FG + CEC G CD G+C C + G
Sbjct: 1443 LCAPGKTGSRCDIGCGVNR--FGPDCSQRCECLNGGQ------CDPRNGRCTCLNGWIGP 1494
Query: 244 QCR 246
C+
Sbjct: 1495 SCQ 1497
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 66/247 (26%), Positives = 95/247 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFC----TACNCNP-IGSLNLQCNSEG-RC- 75
G C+ C+ GPNC K C + + N C + +C+P IG + + G RC
Sbjct: 793 GLCV-CKDGWMGPNCAKACVAGRWGPNCANQCDCRSSVGSCDPVIGLCHCEAGYMGPRCD 851
Query: 76 -QCKPGVTGDKCD-RCDVNHYDFGE--AGCKSCECNPAGSVKNTPNCDSVKG-QCES-AQ 129
+C G G C RC + E +G +C G+ P + G +C+ Q
Sbjct: 852 QKCPQGFFGQSCQHRCQCENGAVCEHVSGACTCLAGWTGTYCEKPCPEGFHGLECQQKCQ 911
Query: 130 LSSRGRVHTELR-VQSRKNF-DPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS------- 180
+ GR H Q + P N C+ T+ G S +C++
Sbjct: 912 CLNGGRCHPVTGGCQCPSGWVGPVCNAT-----CEAGTF--GPACSQTCRCHNNGTCDPA 964
Query: 181 EGRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKGQCECKD 238
+GRC+C G TG C++ C Y GC C C GS CD + G C C
Sbjct: 965 DGRCECGAGWTGSSCEQECSAGLYG---VGCNQHCLCQNGGS------CDRISGHCTCVS 1015
Query: 239 NVEGAQC 245
G C
Sbjct: 1016 GWTGVAC 1022
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 65/228 (28%), Positives = 87/228 (38%)
Query: 38 CEKCRDN-YYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYD 95
C+ C + Y GD AC+C P G + CN C G G C C +
Sbjct: 474 CDDCSNGGYCNAEGD----ACDC-PDGWTGILCNQT----CPEGTFGKNCSFTCKCRNGG 524
Query: 96 FGEAGCKSCECNPA--GSVKNTPNCDSVKGQ-C-ESAQLSSRGRVHTELRVQSRKNFDPA 151
+ C C P G + + G+ C + ++ GR H R DP
Sbjct: 525 TCDPISGKCRCPPGVNGDLCQDGCPKGMYGKHCNKKCNCANNGRCH---RTYGACLCDPG 581
Query: 152 -GNRIWDLRRCKRDTYPLGHGGSLNLQC---NS------EGRCQCKPGVTGDKCDR-CDV 200
R L C + +Y G G S QC N+ G C CKPG G C+R CD
Sbjct: 582 LYGRFCHLP-CPKWSY--GSGCSSECQCVQQNTLECHRRHGTCVCKPGYQGKTCNRECDS 638
Query: 201 NHYDFGEAGCK-SCECNPAGSVKNTPNCDSVKGQCE--CKDNVEGAQC 245
Y GC+ C+C PAG +C + GQC+ C + G C
Sbjct: 639 GFYG---PGCRLKCQC-PAGV-----SCHPMSGQCQRQCPAGLHGEHC 677
Score = 145 (56.1 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 71/253 (28%), Positives = 92/253 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G DC G C + C + + G N C C G+ + G+C+C PGV
Sbjct: 487 GDACDCPDGWTGILCNQTCPEGTF---GKNCSFTCKCRNGGTCD---PISGKCRCPPGVN 540
Query: 83 GDKC-DRCDVNHY--------DFGEAG-CK----SCECNPA--GSVKNTPNCD--SVKGQ 124
GD C D C Y + G C +C C+P G + P C S
Sbjct: 541 GDLCQDGCPKGMYGKHCNKKCNCANNGRCHRTYGACLCDPGLYGRFCHLP-CPKWSYGSG 599
Query: 125 CES-AQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNS--- 180
C S Q + + R P R C Y G G L QC +
Sbjct: 600 CSSECQCVQQNTLECHRR-HGTCVCKPGYQGKTCNRECDSGFY--GPGCRLKCQCPAGVS 656
Query: 181 ----EGRCQ--CKPGVTGDKCDR-CDVNHYDFGEAGCKS-CECNPAGSVKNTPNCDSVKG 232
G+CQ C G+ G+ CDR C + FG GC C+C K P C+SV G
Sbjct: 657 CHPMSGQCQRQCPAGLHGEHCDRECPMGQ--FG-VGCTQFCDC------KGAP-CNSVTG 706
Query: 233 QCECKDNVEGAQC 245
+C C G C
Sbjct: 707 KCHCPAGQTGQHC 719
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 66/251 (26%), Positives = 92/251 (36%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGV 81
G C C + G +CEK C + + C +C+ N G + C+ + G C C PG
Sbjct: 706 GKC-HCPAGQTGQHCEKECEEGRWGLGCAESCPSCD-N--GGV---CDRQNGTCVCSPGF 758
Query: 82 TGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKN-TPNC---DSVKG-QCESAQLSSRGR 135
G+ C C H FG + C C G + T C D G C A ++ R
Sbjct: 759 MGNLCQNVCPDGH--FGLSCLLRCSCQNEGKCHHVTGLCVCKDGWMGPNCAKACVAGRWG 816
Query: 136 VHTELRVQSRKNF---DPA-GNRIWDLR----RCKRDTYPLGH-GGSLNLQCNSE----- 181
+ + R + DP G + RC + P G G S +C E
Sbjct: 817 PNCANQCDCRSSVGSCDPVIGLCHCEAGYMGPRCDQKC-PQGFFGQSCQHRCQCENGAVC 875
Query: 182 ----GRCQCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCEC 236
G C C G TG C++ C + E K C+C G C V G C+C
Sbjct: 876 EHVSGACTCLAGWTGTYCEKPCPEGFHGL-ECQQK-CQCLNGG------RCHPVTGGCQC 927
Query: 237 KDNVEGAQCRS 247
G C +
Sbjct: 928 PSGWVGPVCNA 938
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 63/248 (25%), Positives = 92/248 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKPGVT 82
G C+ C G C+ C D ++ G + C+C G + + G C CK G
Sbjct: 750 GTCV-CSPGFMGNLCQNVCPDGHF---GLSCLLRCSCQNEGKCH---HVTGLCVCKDGWM 802
Query: 83 GDKCDR-CDVNHYD---FGEAGCKSC--ECNPAGSVKNT------PNCDSVKGQCESAQL 130
G C + C + + C+S C+P + + P CD Q Q
Sbjct: 803 GPNCAKACVAGRWGPNCANQCDCRSSVGSCDPVIGLCHCEAGYMGPRCDQKCPQGFFGQ- 861
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRI--WDLRRCKRDTYPLG-HGGSLN--LQCNSEGRC- 184
S + R E ++ A + W C++ P G HG QC + GRC
Sbjct: 862 SCQHRCQCENGAVC-EHVSGACTCLAGWTGTYCEKPC-PEGFHGLECQQKCQCLNGGRCH 919
Query: 185 ------QCKPGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK 237
QC G G C+ C+ FG A ++C C+ N CD G+CEC
Sbjct: 920 PVTGGCQCPSGWVGPVCNATCEAG--TFGPACSQTCRCH------NNGTCDPADGRCECG 971
Query: 238 DNVEGAQC 245
G+ C
Sbjct: 972 AGWTGSSC 979
>RGD|2324745 [details] [associations]
symbol:Stab1 "stabilin 1" species:10116 "Rattus norvegicus"
[GO:0005041 "low-density lipoprotein receptor activity"
evidence=IEA;ISO] [GO:0005044 "scavenger receptor activity"
evidence=IEA;ISO] [GO:0005540 "hyaluronic acid binding"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA;ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007267 "cell-cell signaling" evidence=IEA;ISO] [GO:0016525
"negative regulation of angiogenesis" evidence=IEA;ISO] [GO:0030169
"low-density lipoprotein particle binding" evidence=IEA;ISO]
[GO:0042742 "defense response to bacterium" evidence=IEA;ISO]
[GO:0051635 "bacterial cell surface binding" evidence=IEA;ISO]
InterPro:IPR000538 InterPro:IPR000742 Pfam:PF00193 PROSITE:PS01241
PROSITE:PS50026 PROSITE:PS50963 SMART:SM00181 SMART:SM00445
Pfam:PF02469 InterPro:IPR000782 RGD:2324745 GO:GO:0005887
GO:GO:0042742 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155 GO:GO:0007267
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 GO:GO:0016525
InterPro:IPR002049 SMART:SM00180 GO:GO:0030169 GO:GO:0051635
Gene3D:2.30.180.10 SMART:SM00554 SUPFAM:SSF82153 PROSITE:PS50213
GO:GO:0005044 GO:GO:0005540 GO:GO:0005041 InterPro:IPR024731
Pfam:PF12947 Gene3D:2.40.155.10 InterPro:IPR023413
GeneTree:ENSGT00690000101914 CTD:23166 OMA:AECIPTG
OrthoDB:EOG4VQ9NC IPI:IPI00362444 RefSeq:XP_002725202.1
RefSeq:XP_002728424.1 UniGene:Rn.144136 ProteinModelPortal:D3ZWH1
Ensembl:ENSRNOT00000025394 GeneID:100363145 KEGG:rno:100363145
UCSC:RGD:2324745 Uniprot:D3ZWH1
Length = 2572
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 71/244 (29%), Positives = 101/244 (41%)
Query: 21 GHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNC-NPIGSLNLQCNSEGRCQCKP 79
G G C+ CQ + G C+ CRD + G + + CNC + + S Q N G CQC
Sbjct: 132 GGNGTCV-CQENFSGSACQDCRDP--NRFGPDCQSVCNCVHGVCSRGPQGN--GSCQCFA 186
Query: 80 GVTGDKCD---------RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCESAQL 130
G TG CD RC N EA +C+C P G ++ C + C+ +
Sbjct: 187 GYTGPHCDQELPVCQSLRCPQNSQCSAEA--PACKCLP-GYIQQDNACLPLD-PCQPSPC 242
Query: 131 SSRGRVHTELRVQSRKNFDPAGNRIWDLRRC-KRDTYPLGHGG--SLNLQC--NSEGR-- 183
SS R Q + + P N D + C +D GG S + C + G+
Sbjct: 243 SSLARCSVTPSGQPQCHC-PE-NYHGDGKVCLPQDPCLTNFGGCPSNSTFCLYRAPGKAT 300
Query: 184 CQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECK-DNV-E 241
C C PG+T D + H CK C+ + + + TP+ K C CK D V +
Sbjct: 301 CMCWPGMTSINNDASEGCH-----VSCKPHSCDKSATCQVTPDR---KTSCVCKSDEVGD 352
Query: 242 GAQC 245
G C
Sbjct: 353 GYAC 356
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 59/244 (24%), Positives = 78/244 (31%)
Query: 5 GFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS 64
G C + +R G C CQ G CE C Y G C+C+ G
Sbjct: 1337 GLGGVCSGHGQCQDRFLGNGECR-CQEGFHGTACEMCELGRY---GPTCSGVCDCDH-GL 1391
Query: 65 LNLQCNSEGRCQCKPGVTGDKCD----------RCDVNHYDFGE-AGCKSCECNPAGSVK 113
G C C G G +CD +CD N + AG C C AG
Sbjct: 1392 CQEGLRGNGSCICNVGWQGLRCDQKITDRQCPKKCDPNANCIQDSAGIPVCVC-AAGYSG 1450
Query: 114 NTPNCDSVKGQCESAQLSSRGRVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLGHGGS 173
N C V C S + ++ D C+ L H G
Sbjct: 1451 NGSYCSEVD-PCTSGHGGCSPYANCTKVAPGQRTCTCLDGYTGDGELCQEINSCLVHNGG 1509
Query: 174 --LNLQCNSEG----RCQCKPGVTGDKCDRCDV-NHYDFGEAGCKS-CECNPAGSVKNTP 225
+N +C G C C+ G +GD C + + GC C G + T
Sbjct: 1510 CHVNAECIPTGPQQVSCNCREGYSGDGIQSCKLLDPCSQNNGGCSPYAVCKSTGDGQRTC 1569
Query: 226 NCDS 229
+CDS
Sbjct: 1570 SCDS 1573
Score = 103 (41.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/80 (32%), Positives = 34/80 (42%)
Query: 169 GHGGSLNLQCNSEGRCQCKPGVTGDKCDRCDVNHYDFGEAGCKSCECNPAGSVKNTPNCD 228
GHG L+ + G+C C PG G C+ C FG C++C C P G CD
Sbjct: 1982 GHGVCLD-GISGSGQCNCHPGFAGTACELCAPGA--FGPQ-CQACRCAPHG------RCD 2031
Query: 229 SV---KGQCECKDNVEGAQC 245
G C C + G +C
Sbjct: 2032 EGLGGSGSCFCDEGWTGPRC 2051
Score = 81 (33.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 36/135 (26%), Positives = 55/135 (40%)
Query: 1 CNCN-GFSN-RC---FFDKELYNRTGHGGHCLDCQGDRDG-PNCEKCRDNYYQKSGD-NF 53
C CN G+ RC D++ + +C+ D G P C C Y SG+ ++
Sbjct: 1402 CICNVGWQGLRCDQKITDRQCPKKCDPNANCIQ---DSAGIPVCV-CAAGY---SGNGSY 1454
Query: 54 CTA---CN-----CNPIGSLNLQCNSEGRCQCKPGVTGDKCDRC-DVNHYDFGEAGCK-S 103
C+ C C+P + + C C G TGD + C ++N GC +
Sbjct: 1455 CSEVDPCTSGHGGCSPYANCTKVAPGQRTCTCLDGYTGDG-ELCQEINSCLVHNGGCHVN 1513
Query: 104 CECNPAGSVKNTPNC 118
EC P G + + NC
Sbjct: 1514 AECIPTGPQQVSCNC 1528
Score = 79 (32.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 27/86 (31%), Positives = 34/86 (39%)
Query: 5 GFSNRCFFDKELYNRTGHGGHCLDCQGDRDGPNCEKCRDNYYQKSGDNFCTACNCNPIGS 64
GFSN C+ + G CL C D G C C + K G+ C C G
Sbjct: 737 GFSNPCYGKGNCSDGVQGNGACL-CFPDYKGIACHICSNP--NKHGEQCQEDCGCVH-GL 792
Query: 65 LNLQCNSEGRCQ---CKPGVTGDKCD 87
+ + S G CQ C PG G C+
Sbjct: 793 CDNRPGSGGVCQQGTCAPGFQGRFCN 818
Score = 68 (29.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 30/100 (30%), Positives = 38/100 (38%)
Query: 29 CQGDRDGPNCEKCRDNYYQKSGDNFCTAC-NCNPIGSLNLQCNSEGRCQCKPGVTGDKCD 87
C+G GP+C +C + N C NC+ +Q N G C C P G C
Sbjct: 723 CKGFF-GPDCTQCPGGF-----SNPCYGKGNCSD----GVQGN--GACLCFPDYKGIACH 770
Query: 88 RCDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSV--KGQC 125
C N GE + C C G N P V +G C
Sbjct: 771 ICS-NPNKHGEQCQEDCGC-VHGLCDNRPGSGGVCQQGTC 808
>UNIPROTKB|F1RK83 [details] [associations]
symbol:SCARF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007157 "heterophilic cell-cell adhesion" evidence=IEA]
[GO:0005044 "scavenger receptor activity" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007157 InterPro:IPR009030 SUPFAM:SSF57184
GO:GO:0005044 GeneTree:ENSGT00690000101691 OMA:NVCRAPG
EMBL:CU468322 Ensembl:ENSSSCT00000011070 Uniprot:F1RK83
Length = 870
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 67/242 (27%), Positives = 92/242 (38%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNY---YQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
G C C R G CE C+ + + +SG AC C P G QC S C C
Sbjct: 139 GQCT-CHARRWGARCEHACQCQHGACHPRSG-----ACRCEP-GWWGAQCASA--CYCSA 189
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCD----SVKGQCESAQLSSRG 134
D + H + C + C CN + + + C + +CE RG
Sbjct: 190 TSRCDPQTGACLCHSGWWGRSCNNQCACNSSPCEQQSGRCQCRERTFGARCERYCQCFRG 249
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTY----PLGHGGSLNLQ-CN-SEGRC-QCK 187
R H V + +P + C Y P G Q C +EGRC C+
Sbjct: 250 RCHP---VDGTCSCEPGYRGKYCREPCPAGFYGPGLPPPCGQCKGQQPCTVAEGRCLTCE 306
Query: 188 PGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
PG G KCD+ C Y GE GC C P ++ +C+ V G+C C G +C
Sbjct: 307 PGWNGTKCDQPCSTGFY--GE-GCGH-RCPPC---RDGHSCNHVTGKCTRCNAGWIGDRC 359
Query: 246 RS 247
+
Sbjct: 360 ET 361
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 68/225 (30%), Positives = 88/225 (39%)
Query: 41 CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDR-CDVN----HY 94
C ++ +S +N C ACN +P C + GRCQC+ G +C+R C H
Sbjct: 202 CHSGWWGRSCNNQC-ACNSSP-------CEQQSGRCQCRERTFGARCERYCQCFRGRCHP 253
Query: 95 DFGEAGC------KSC-ECNPAGSVKN--TPNCDSVKGQ--CESAQLSSRGRVHT-ELRV 142
G C K C E PAG P C KGQ C A+ GR T E
Sbjct: 254 VDGTCSCEPGYRGKYCREPCPAGFYGPGLPPPCGQCKGQQPCTVAE----GRCLTCEPGW 309
Query: 143 QSRKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCD-RCDV 200
K P + C P G S N + G+C +C G GD+C+ +C
Sbjct: 310 NGTKCDQPCSTGFYG-EGCGHRCPPCRDGHSCN---HVTGKCTRCNAGWIGDRCETKCSN 365
Query: 201 NHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y GE C + C GS +CD G+C C V G C
Sbjct: 366 GTY--GE-DC-AFVCADCGS----GHCDFQSGRCLCSPGVHGPHC 402
Score = 99 (39.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/83 (33%), Positives = 36/83 (43%)
Query: 46 YQKSGDNFCTA-CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS 103
+++ GD A C N S N C G C+C+ G G CD +C F CK
Sbjct: 68 WRQQGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCP---RQFWGPDCKE 124
Query: 104 -CECNPAGSVKNTPNCDSVKGQC 125
C C+P G C+ V GQC
Sbjct: 125 LCVCHPHGQ------CEDVTGQC 141
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/81 (27%), Positives = 27/81 (33%)
Query: 177 QCNS-EGRCQCKPGVTGDKCDR-CDVNHYD-FGEAGCKSCE-------CNPAGSVKNTPN 226
QC G+C C G +C+ C H +G CE C A T
Sbjct: 133 QCEDVTGQCTCHARRWGARCEHACQCQHGACHPRSGACRCEPGWWGAQCASACYCSATSR 192
Query: 227 CDSVKGQCECKDNVEGAQCRS 247
CD G C C G C +
Sbjct: 193 CDPQTGACLCHSGWWGRSCNN 213
>RGD|621787 [details] [associations]
symbol:Celsr3 "cadherin, EGF LAG seven-pass G-type receptor 3"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0007413 "axonal fasciculation"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=ISO]
[GO:0042384 "cilium assembly" evidence=ISO] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00181
SMART:SM00303 RGD:621787 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 CTD:1951 KO:K04602
OrthoDB:EOG4C87RG EMBL:AB011528 IPI:IPI00207551 RefSeq:NP_112610.1
UniGene:Rn.14558 ProteinModelPortal:O88278 STRING:O88278
PhosphoSite:O88278 PRIDE:O88278 GeneID:83466 KEGG:rno:83466
UCSC:RGD:621787 InParanoid:O88278 NextBio:615859
ArrayExpress:O88278 Genevestigator:O88278
GermOnline:ENSRNOG00000034005 Uniprot:O88278
Length = 3313
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/116 (31%), Positives = 54/116 (46%)
Query: 1 CNC-NG-FSNRCFFDKELYNRTGHGGH--CLDCQGD-RDG--PNCEK------CRDNYYQ 47
C+C +G F C + G G C C D G PNC K C++ +Y+
Sbjct: 1999 CDCASGYFGQHCEHRMDQQCPRGWWGSPTCGPCNCDVHKGFDPNCNKTSGQCHCKEFHYR 2058
Query: 48 KSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 102
G + C C+C P+GS + C G+C C+PG G +C+ CD + +GC+
Sbjct: 2059 PRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPGALGRQCNSCDSPFAEVTASGCR 2114
>UNIPROTKB|O88278 [details] [associations]
symbol:Celsr3 "Cadherin EGF LAG seven-pass G-type receptor
3" species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00181
SMART:SM00303 RGD:621787 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 CTD:1951 KO:K04602
OrthoDB:EOG4C87RG EMBL:AB011528 IPI:IPI00207551 RefSeq:NP_112610.1
UniGene:Rn.14558 ProteinModelPortal:O88278 STRING:O88278
PhosphoSite:O88278 PRIDE:O88278 GeneID:83466 KEGG:rno:83466
UCSC:RGD:621787 InParanoid:O88278 NextBio:615859
ArrayExpress:O88278 Genevestigator:O88278
GermOnline:ENSRNOG00000034005 Uniprot:O88278
Length = 3313
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/116 (31%), Positives = 54/116 (46%)
Query: 1 CNC-NG-FSNRCFFDKELYNRTGHGGH--CLDCQGD-RDG--PNCEK------CRDNYYQ 47
C+C +G F C + G G C C D G PNC K C++ +Y+
Sbjct: 1999 CDCASGYFGQHCEHRMDQQCPRGWWGSPTCGPCNCDVHKGFDPNCNKTSGQCHCKEFHYR 2058
Query: 48 KSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDRCDVNHYDFGEAGCK 102
G + C C+C P+GS + C G+C C+PG G +C+ CD + +GC+
Sbjct: 2059 PRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPGALGRQCNSCDSPFAEVTASGCR 2114
>UNIPROTKB|E1B9M8 [details] [associations]
symbol:SCARF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007157 "heterophilic cell-cell adhesion" evidence=IEA]
[GO:0005044 "scavenger receptor activity" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007157 InterPro:IPR002049 Pfam:PF00053
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
GeneTree:ENSGT00690000101691 OMA:NVCRAPG EMBL:DAAA02045750
EMBL:DAAA02045751 EMBL:DAAA02045752 IPI:IPI00690576
Ensembl:ENSBTAT00000025815 Uniprot:E1B9M8
Length = 843
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 68/242 (28%), Positives = 91/242 (37%)
Query: 24 GHCLDCQGDRDGPNCEK-CRDNY---YQKSGDNFCTACNCNPIGSLNLQCNSEGRCQCKP 79
G C C R G CE C+ + + +SG AC C P G QC S C C
Sbjct: 132 GQCT-CHARRWGARCEHACQCQHGACHPRSG-----ACRCEP-GWWGPQCASA--CYCSA 182
Query: 80 GVTGDKCDRCDVNHYDFGEAGCKS-CECNPAGSVKNTPNCD----SVKGQCESAQLSSRG 134
D + H + C + C CN + + + C + +CE RG
Sbjct: 183 TSRCDPQTGACLCHAGWWGRSCNNQCACNTSPCEQQSGRCQCRERTFGARCERYCQCFRG 242
Query: 135 RVHTELRVQSRKNFDPAGNRIWDLRRCKRDTYPLG---HGGSLNLQ--CN-SEGRC-QCK 187
R H V +P + C Y LG G Q C +EGRC C+
Sbjct: 243 RCHP---VDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTCE 299
Query: 188 PGVTGDKCDR-CDVNHYDFGEAGCKSCECNPAGSVKNTPNCDSVKGQC-ECKDNVEGAQC 245
PG G KCD+ C Y GE GC C P ++ C+ V G+C C G +C
Sbjct: 300 PGWNGTKCDQPCAAGFY--GE-GCGR-RCPPC---RDGHACNHVTGKCTRCNAGWIGDRC 352
Query: 246 RS 247
+
Sbjct: 353 ET 354
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 66/223 (29%), Positives = 88/223 (39%)
Query: 41 CRDNYYQKSGDNFCTACNCNPIGSLNLQCNSE-GRCQCKPGVTGDKCDR-CDVN----HY 94
C ++ +S +N C ACN +P C + GRCQC+ G +C+R C H
Sbjct: 195 CHAGWWGRSCNNQC-ACNTSP-------CEQQSGRCQCRERTFGARCERYCQCFRGRCHP 246
Query: 95 DFGEAGC------KSC-ECNPAGSVKNTPNCDSVKGQCESAQ--LSSRGRVHT-ELRVQS 144
G C K C E PAG C GQC+ Q + GR T E
Sbjct: 247 VDGTCACEPGYRGKYCREPCPAGFYGL--GCRRRCGQCKGQQPCTVAEGRCLTCEPGWNG 304
Query: 145 RKNFDPAGNRIWDLRRCKRDTYPLGHGGSLNLQCNSEGRC-QCKPGVTGDKCD-RCDVNH 202
K P + C R P G + N + G+C +C G GD+C+ +C
Sbjct: 305 TKCDQPCAAGFYG-EGCGRRCPPCRDGHACN---HVTGKCTRCNAGWIGDRCETKCSNGT 360
Query: 203 YDFGEAGCKSCECNPAGSVKNTPNCDSVKGQCECKDNVEGAQC 245
Y GE C + C GS +CD G+C C V G C
Sbjct: 361 Y--GE-DC-AFVCADCGS----GHCDFQSGRCLCSPGVHGPHC 395
Score = 99 (39.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 28/83 (33%), Positives = 36/83 (43%)
Query: 46 YQKSGDNFCTA-CNCNPIGSLNLQCNSEGRCQCKPGVTGDKCD-RCDVNHYDFGEAGCKS 103
+++ GD A C N S N C G C+C+ G G CD +C F CK
Sbjct: 61 WRQQGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCP---RQFWGPDCKE 117
Query: 104 -CECNPAGSVKNTPNCDSVKGQC 125
C C+P G C+ V GQC
Sbjct: 118 LCVCHPHGQ------CEDVTGQC 134
Score = 65 (27.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/81 (27%), Positives = 27/81 (33%)
Query: 177 QCNS-EGRCQCKPGVTGDKCDR-CDVNHYD-FGEAGCKSCE-------CNPAGSVKNTPN 226
QC G+C C G +C+ C H +G CE C A T
Sbjct: 126 QCEDVTGQCTCHARRWGARCEHACQCQHGACHPRSGACRCEPGWWGPQCASACYCSATSR 185
Query: 227 CDSVKGQCECKDNVEGAQCRS 247
CD G C C G C +
Sbjct: 186 CDPQTGACLCHAGWWGRSCNN 206
WARNING: HSPs involving 215 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.479 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 247 247 0.00078 114 3 12 22 0.45 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 465
No. of states in DFA: 575 (61 KB)
Total size of DFA: 180 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 18.61u 0.06s 18.67t Elapsed: 00:00:05
Total cpu time: 18.87u 0.07s 18.94t Elapsed: 00:00:06
Start: Thu Aug 15 12:39:47 2013 End: Thu Aug 15 12:39:53 2013
WARNINGS ISSUED: 2