Query psy15473
Match_columns 190
No_of_seqs 140 out of 1612
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 21:58:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15473.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15473hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1klo_A Laminin; glycoprotein; 99.9 1.3E-22 4.5E-27 147.1 3.8 124 3-145 18-156 (162)
2 1klo_A Laminin; glycoprotein; 99.8 7.8E-22 2.7E-26 143.0 5.2 134 38-190 1-149 (162)
3 4aqs_A Laminin subunit beta-1; 99.8 2.7E-20 9.3E-25 157.8 9.6 181 2-187 278-525 (525)
4 2gy5_A Angiopoietin-1 receptor 99.7 2.2E-17 7.4E-22 136.3 8.2 132 18-188 188-321 (423)
5 2vj2_A Jagged-1; signalling, p 99.6 5.3E-16 1.8E-20 113.1 2.0 135 18-187 20-169 (169)
6 2vj3_A Neurogenic locus notch 99.5 1E-14 3.6E-19 102.4 7.2 113 31-186 4-118 (135)
7 4d90_A EGF-like repeat and dis 99.5 2.5E-14 8.6E-19 101.2 7.5 134 33-188 1-134 (143)
8 2ygq_A WIF-1, WNT inhibitory f 99.5 2.9E-14 1E-18 113.9 6.4 132 18-189 168-310 (324)
9 2gy5_A Angiopoietin-1 receptor 99.5 5.1E-14 1.7E-18 116.2 5.8 105 2-136 215-321 (423)
10 4aqs_A Laminin subunit beta-1; 99.4 8E-14 2.7E-18 118.2 4.6 117 2-135 406-525 (525)
11 3fcs_B Integrin beta-3; beta p 99.4 2.9E-13 9.9E-18 117.3 6.5 57 3-75 458-522 (690)
12 2y38_A Laminin subunit alpha-5 99.4 5.5E-13 1.9E-17 108.5 5.8 94 2-146 285-384 (403)
13 3k6s_B Integrin beta-2; cell r 99.3 1.4E-12 4.8E-17 112.8 7.3 117 2-136 445-593 (687)
14 4fbr_A Lectin, myxobacterial h 99.3 5.7E-16 1.9E-20 119.3 -14.2 167 3-183 53-265 (267)
15 1z1y_A Ookinete surface protei 99.3 5.1E-14 1.8E-18 104.0 -4.6 137 13-187 24-175 (186)
16 2y38_A Laminin subunit alpha-5 99.2 2.2E-11 7.7E-16 99.0 5.5 87 104-190 264-376 (403)
17 2vj3_A Neurogenic locus notch 99.2 2.1E-11 7.3E-16 85.3 4.3 98 13-154 27-126 (135)
18 4fbr_A Lectin, myxobacterial h 99.1 2.5E-14 8.6E-19 110.1 -11.9 163 9-187 8-202 (267)
19 2ygq_A WIF-1, WNT inhibitory f 99.1 4.2E-11 1.4E-15 95.6 5.3 116 34-187 150-276 (324)
20 2vj2_A Jagged-1; signalling, p 99.1 1.8E-11 6.1E-16 89.0 2.9 117 2-134 16-168 (169)
21 4d90_A EGF-like repeat and dis 99.1 2.2E-10 7.5E-15 80.7 7.7 108 3-134 23-132 (143)
22 3k6s_B Integrin beta-2; cell r 99.1 6.6E-11 2.3E-15 102.4 5.7 81 88-188 505-593 (687)
23 3zyj_B Netrin-G1; cell adhesio 99.1 5.1E-11 1.7E-15 97.3 3.4 98 3-173 313-414 (426)
24 4aqt_A Laminin subunit gamma-1 99.0 3.2E-10 1.1E-14 91.7 6.1 102 37-156 254-368 (375)
25 3fcs_B Integrin beta-3; beta p 99.0 7.4E-10 2.5E-14 96.1 8.3 109 18-185 507-626 (690)
26 1tpg_A T-plasminogen activator 99.0 4.5E-10 1.5E-14 73.2 4.0 81 84-187 4-86 (91)
27 1yo8_A Thrombospondin-2; EGF, 98.9 6.2E-10 2.1E-14 95.5 4.5 124 31-186 2-145 (634)
28 3zyj_B Netrin-G1; cell adhesio 98.9 2.6E-10 8.8E-15 93.2 1.8 84 101-189 292-400 (426)
29 2bou_A EGF-like module contain 98.9 4.1E-10 1.4E-14 79.4 2.4 120 38-186 7-133 (143)
30 4aqt_A Laminin subunit gamma-1 98.9 7.1E-10 2.4E-14 89.8 4.1 92 3-107 272-368 (375)
31 2w86_A Fibrillin-1, fibrillin1 98.9 3.4E-11 1.2E-15 85.5 -3.6 134 30-185 2-142 (147)
32 1tpg_A T-plasminogen activator 98.8 3.5E-09 1.2E-13 69.0 4.7 64 2-75 1-85 (91)
33 1uzk_A Fibrillin-1; glycoprote 98.8 5.6E-10 1.9E-14 80.4 -0.5 122 31-185 2-157 (162)
34 3u7u_G Neuregulin 1; signaling 98.7 2.7E-09 9.2E-14 62.6 1.5 45 142-187 1-49 (55)
35 1z1y_A Ookinete surface protei 98.6 4.4E-10 1.5E-14 82.8 -4.5 105 35-182 8-126 (186)
36 2p28_B Integrin beta-2; hybrid 98.6 5.1E-09 1.7E-13 78.8 0.8 67 106-187 143-214 (217)
37 1dx5_I Thrombomodulin; serine 98.6 6.4E-09 2.2E-13 71.0 0.4 50 129-184 59-112 (118)
38 1edm_B Factor IX; epidermal gr 98.5 7.6E-08 2.6E-12 52.3 3.8 38 148-187 2-39 (39)
39 2p28_B Integrin beta-2; hybrid 98.5 2.6E-08 8.8E-13 74.9 2.3 98 3-134 107-213 (217)
40 3u7u_G Neuregulin 1; signaling 98.3 1.8E-07 6.2E-12 54.7 1.8 49 25-76 1-49 (55)
41 2bou_A EGF-like module contain 98.2 8.1E-07 2.8E-11 62.3 3.1 50 15-74 20-81 (143)
42 1egf_A Epidermal growth factor 98.2 9.3E-07 3.2E-11 51.3 2.8 38 149-187 3-44 (53)
43 2wg3_C Hedgehog-interacting pr 98.2 2.3E-07 8E-12 77.3 0.3 77 84-187 379-455 (463)
44 1yo8_A Thrombospondin-2; EGF, 98.2 4.9E-07 1.7E-11 77.7 1.9 52 14-74 25-84 (634)
45 1a3p_A Epidermal growth factor 98.1 1.9E-06 6.5E-11 48.2 3.2 36 151-187 2-41 (45)
46 1k36_A Epiregulin; EGF-like fo 98.1 1.2E-06 4.1E-11 49.3 1.6 37 150-188 4-44 (46)
47 2c4f_L Coagulation factor VII 98.0 8.5E-07 2.9E-11 62.3 0.6 73 100-186 47-128 (142)
48 1emn_A Fibrillin; extracellula 98.0 5E-06 1.7E-10 52.7 3.8 51 130-185 25-78 (82)
49 1nfu_B Coagulation factor XA, 98.0 1.1E-06 3.7E-11 64.9 0.2 73 99-186 41-120 (195)
50 3ca7_A Protein spitz; argos, E 98.0 6.5E-07 2.2E-11 51.8 -0.9 32 155-187 14-48 (52)
51 2k2s_B Micronemal protein 6; m 97.9 1.3E-06 4.4E-11 52.1 0.1 38 148-187 10-50 (61)
52 3h5c_B Vitamin K-dependent pro 97.9 1.9E-05 6.5E-10 62.4 6.5 69 100-183 5-76 (317)
53 2vh0_B Activated factor XA lig 97.9 1.6E-06 5.4E-11 60.3 0.2 72 100-186 42-120 (134)
54 1x7a_L Coagulation factor IX, 97.9 7.4E-06 2.5E-10 57.7 3.7 23 30-52 46-68 (146)
55 1edm_B Factor IX; epidermal gr 97.9 1.5E-05 5.2E-10 42.9 4.0 36 31-74 2-37 (39)
56 1x7a_L Coagulation factor IX, 97.9 4.2E-06 1.4E-10 59.0 2.1 70 99-186 47-125 (146)
57 1hae_A Heregulin-alpha; growth 97.9 2.9E-06 1E-10 51.0 0.9 37 150-187 7-47 (63)
58 2c4f_L Coagulation factor VII 97.8 4.5E-06 1.5E-10 58.5 1.6 35 31-73 46-80 (142)
59 1aut_L Activated protein C; se 97.8 5.9E-06 2E-10 55.7 2.0 33 31-71 5-45 (114)
60 1lmj_A Fibrillin 1; EGF, calci 97.7 6.8E-06 2.3E-10 52.5 1.1 72 100-184 3-80 (86)
61 2w2n_E LDL receptor, low-densi 97.7 4.8E-06 1.7E-10 55.5 0.1 49 130-184 49-101 (107)
62 1aut_L Activated protein C; se 97.6 2.1E-05 7E-10 53.0 2.4 48 130-182 34-85 (114)
63 1nfu_B Coagulation factor XA, 97.6 9.2E-06 3.1E-10 59.9 0.1 23 30-52 40-62 (195)
64 2wg3_C Hedgehog-interacting pr 97.6 8.1E-06 2.8E-10 68.0 -0.5 76 17-134 379-454 (463)
65 1nql_B Epidermal growth factor 97.6 1.3E-05 4.3E-10 46.5 0.4 33 154-187 11-44 (53)
66 1z6c_A Vitamin K-dependent pro 97.6 2.1E-05 7.3E-10 50.3 1.5 50 130-186 24-77 (87)
67 2vh0_B Activated factor XA lig 97.5 1.3E-05 4.6E-10 55.5 0.1 22 31-52 41-62 (134)
68 3h5c_B Vitamin K-dependent pro 97.5 0.00016 5.6E-09 57.0 5.6 21 31-51 4-24 (317)
69 1emn_A Fibrillin; extracellula 97.4 9.4E-05 3.2E-09 46.7 2.8 54 7-71 19-75 (82)
70 1z6c_A Vitamin K-dependent pro 97.4 0.00015 5.1E-09 46.2 3.4 21 31-52 2-24 (87)
71 1egf_A Epidermal growth factor 97.3 0.00019 6.4E-09 41.4 3.3 36 32-75 3-43 (53)
72 3ltf_D Protein spitz; receptor 97.3 4.9E-05 1.7E-09 44.8 0.5 31 156-187 15-48 (58)
73 2w86_A Fibrillin-1, fibrillin1 97.3 2.4E-05 8E-10 55.0 -1.2 44 18-71 91-139 (147)
74 1dx5_I Thrombomodulin; serine 97.2 4.8E-05 1.6E-09 51.5 0.2 43 18-71 64-110 (118)
75 1lmj_A Fibrillin 1; EGF, calci 97.2 0.0002 6.9E-09 45.5 2.5 31 31-70 2-34 (86)
76 1a3p_A Epidermal growth factor 97.1 0.00035 1.2E-08 38.7 2.6 35 34-74 2-39 (45)
77 1uzk_A Fibrillin-1; glycoprote 97.0 0.00017 5.9E-09 51.3 1.0 60 3-71 75-154 (162)
78 2k2s_B Micronemal protein 6; m 97.0 0.00015 5.2E-09 43.1 0.6 36 31-74 10-48 (61)
79 1k36_A Epiregulin; EGF-like fo 97.0 0.0005 1.7E-08 38.3 2.6 37 32-75 3-42 (46)
80 3ca7_A Protein spitz; argos, E 96.8 0.00013 4.4E-09 41.9 -0.7 35 37-75 13-47 (52)
81 1hae_A Heregulin-alpha; growth 96.7 0.00045 1.5E-08 41.2 1.0 39 33-74 7-45 (63)
82 3v65_B Low-density lipoprotein 96.5 0.0004 1.4E-08 56.2 -0.1 50 131-186 24-82 (386)
83 2w2n_E LDL receptor, low-densi 96.3 0.00046 1.6E-08 45.8 -0.8 50 9-70 45-98 (107)
84 1iox_A Betacellulin; EGF-like 96.3 0.0027 9.1E-08 36.0 2.5 31 155-187 14-45 (50)
85 3p5b_L Low density lipoprotein 96.2 0.0017 5.7E-08 52.8 2.1 44 135-183 24-71 (400)
86 1n7d_A LDL receptor, low-densi 96.2 0.08 2.7E-06 46.1 12.7 54 124-183 308-365 (699)
87 1g1s_A P-selectin; selectin, l 96.1 0.0013 4.5E-08 46.5 0.8 36 150-187 120-155 (162)
88 1nql_B Epidermal growth factor 95.7 0.0038 1.3E-07 35.8 1.3 33 37-75 11-43 (53)
89 3e50_C Protransforming growth 95.6 0.0072 2.5E-07 34.1 2.3 31 155-187 14-45 (50)
90 3tbd_A Netrin-G2, laminet-2; l 95.5 0.0038 1.3E-07 49.6 1.1 42 104-145 268-311 (338)
91 2rnl_A Amphiregulin; AR, color 95.3 0.01 3.6E-07 33.5 2.4 31 155-187 18-49 (50)
92 2ygo_A WIF-1, WNT inhibitory f 95.2 0.0074 2.5E-07 43.7 1.7 30 152-187 151-180 (188)
93 3m0c_C LDL receptor, low-densi 94.9 0.023 8E-07 50.3 4.5 48 129-182 331-382 (791)
94 1q4g_A Prostaglandin G/H synth 94.5 0.017 5.7E-07 49.1 2.5 37 32-76 2-40 (553)
95 1xdt_R Hbegf, heparin-binding 94.2 0.014 4.7E-07 36.2 1.0 32 154-187 45-77 (79)
96 1apq_A Complement protease C1R 94.1 0.036 1.2E-06 31.2 2.6 25 155-183 20-44 (53)
97 3p5b_L Low density lipoprotein 93.9 0.069 2.4E-06 43.2 4.9 30 33-70 1-30 (400)
98 3asi_A Neurexin-1-alpha; beta- 93.7 0.047 1.6E-06 44.4 3.6 41 145-187 181-222 (410)
99 3fl7_A Ephrin receptor; ATP-bi 93.6 0.023 7.8E-07 48.1 1.6 67 107-181 251-319 (536)
100 3cfw_A L-selectin; EGF, cell a 93.6 0.031 1.1E-06 39.3 2.1 34 152-187 122-155 (164)
101 3nt1_A Prostaglandin-endoperox 93.6 0.034 1.2E-06 47.5 2.7 37 32-76 1-39 (587)
102 3ltf_D Protein spitz; receptor 93.6 0.028 9.7E-07 32.7 1.6 31 39-75 15-47 (58)
103 1g1t_A E-selectin; EGF, adhesi 93.3 0.018 6E-07 40.2 0.4 35 151-187 121-155 (157)
104 3v65_B Low-density lipoprotein 92.4 0.029 9.9E-07 45.2 0.5 49 10-70 19-73 (386)
105 3qcw_A Neurexin-1-alpha; synap 91.7 0.12 4.2E-06 47.9 3.8 42 145-188 1013-1055(1245)
106 2kl7_A Fibulin-4; secreted, ca 91.6 0.078 2.7E-06 32.1 1.7 26 148-175 2-29 (71)
107 1g1s_A P-selectin; selectin, l 91.1 0.079 2.7E-06 37.1 1.6 34 33-74 120-153 (162)
108 2fd6_A Urokinase-type plasmino 90.9 0.14 4.9E-06 34.4 2.6 13 38-50 1-13 (122)
109 1n7d_A LDL receptor, low-densi 89.6 0.46 1.6E-05 41.4 5.4 50 10-71 311-364 (699)
110 3fl7_A Ephrin receptor; ATP-bi 88.4 0.14 4.9E-06 43.2 1.3 38 2-41 262-301 (536)
111 2fd6_A Urokinase-type plasmino 88.2 0.35 1.2E-05 32.4 2.9 15 171-186 48-62 (122)
112 3asi_A Neurexin-1-alpha; beta- 87.0 0.52 1.8E-05 38.1 3.8 42 27-76 180-222 (410)
113 3qcw_A Neurexin-1-alpha; synap 86.5 0.35 1.2E-05 45.0 2.7 36 150-187 620-656 (1245)
114 3e50_C Protransforming growth 85.9 0.32 1.1E-05 27.2 1.4 18 12-30 28-45 (50)
115 2ygo_A WIF-1, WNT inhibitory f 85.6 0.51 1.7E-05 34.1 2.7 31 102-135 150-180 (188)
116 2rnl_A Amphiregulin; AR, color 84.9 0.44 1.5E-05 26.6 1.7 13 5-17 36-48 (50)
117 2i9a_A Urokinase-type plasmino 82.1 0.92 3.2E-05 31.4 2.8 34 37-75 12-45 (145)
118 1szb_A Mannose binding lectin- 82.0 0.2 6.8E-06 35.4 -0.7 45 138-186 113-166 (170)
119 1g1t_A E-selectin; EGF, adhesi 81.5 0.43 1.5E-05 32.9 0.9 33 34-74 121-153 (157)
120 2p26_A Integrin beta-2; hybrid 80.6 0.43 1.5E-05 36.8 0.7 58 120-186 207-274 (280)
121 1xdt_R Hbegf, heparin-binding 80.3 0.69 2.4E-05 28.5 1.4 35 33-74 38-75 (79)
122 3cfw_A L-selectin; EGF, cell a 80.1 1.5 5E-05 30.4 3.3 33 34-74 121-153 (164)
123 2e26_A Reelin, reeler protein; 79.4 0.2 6.8E-06 43.6 -1.7 45 135-187 521-565 (725)
124 2e26_A Reelin, reeler protein; 78.2 0.27 9.1E-06 42.8 -1.3 44 85-134 521-564 (725)
125 1gl4_A Nidogen-1, entactin; im 75.8 0.58 2E-05 36.1 0.1 33 31-71 4-38 (285)
126 3urf_Z Tumor necrosis factor r 73.2 3 0.0001 29.6 3.4 26 129-155 117-142 (171)
127 1n1i_A Merozoite surface prote 72.9 2.9 9.9E-05 27.1 2.8 23 157-180 61-83 (105)
128 1q4g_A Prostaglandin G/H synth 71.7 1.5 5.3E-05 37.1 1.7 34 100-134 2-39 (553)
129 2jkh_L Factor X light chain; p 71.6 1.5 5E-05 24.7 1.1 18 162-181 14-31 (55)
130 2p26_A Integrin beta-2; hybrid 70.9 1.6 5.5E-05 33.6 1.5 14 3-16 207-220 (280)
131 2i9a_A Urokinase-type plasmino 70.3 3.6 0.00012 28.3 3.1 28 106-134 13-45 (145)
132 3nt1_A Prostaglandin-endoperox 67.2 1.8 6.2E-05 36.9 1.2 33 101-134 2-38 (587)
133 2hey_R Tumor necrosis factor r 64.4 5.1 0.00017 27.4 2.9 14 14-27 38-51 (146)
134 1kig_L Factor XA; glycoprotein 55.6 3.8 0.00013 22.6 0.8 18 162-181 11-28 (51)
135 3fby_A COMP, cartilage oligome 52.9 4.9 0.00017 33.8 1.4 29 154-183 26-54 (551)
136 3m0c_C LDL receptor, low-densi 51.5 11 0.00038 33.3 3.5 33 152-186 310-350 (791)
137 2bz6_L Blood coagulation facto 49.3 4.6 0.00016 22.5 0.5 19 162-181 12-30 (53)
138 1kli_L Factor VIIA; extrinsic 44.8 9.6 0.00033 22.5 1.5 31 148-181 4-36 (69)
139 3qd6_R CD40L receptor, tumor n 43.5 37 0.0013 23.9 4.7 27 128-155 118-144 (177)
140 3tbd_A Netrin-G2, laminet-2; l 41.1 11 0.00037 29.8 1.6 35 154-190 269-304 (338)
141 1nzi_A Complement C1S componen 38.2 5.5 0.00019 27.2 -0.4 24 161-186 130-157 (159)
142 2uwi_A CRME protein; receptor, 38.0 22 0.00076 24.1 2.7 14 129-142 120-133 (142)
143 2wph_E Coagulation factor IXA 37.8 13 0.00045 21.0 1.3 19 162-181 12-30 (59)
144 1ob1_C Major merozoite surface 34.0 15 0.00052 23.5 1.2 31 152-183 7-37 (99)
145 1jma_B Herpesvirus entry media 27.4 49 0.0017 22.9 3.1 15 130-144 121-135 (167)
146 4fhq_A Tumor necrosis factor r 21.4 26 0.00088 23.6 0.6 7 86-92 85-91 (134)
No 1
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.86 E-value=1.3e-22 Score=147.10 Aligned_cols=124 Identities=27% Similarity=0.686 Sum_probs=100.5
Q ss_pred cee-ecCCCCCCCCCccCCCCcccCCCCC--CCCCCcCCCCCCCC------CceecCCcccccCCCceeEe-ecCCCCCC
Q psy15473 3 RRC-ICQDNTGGDNCERCARGYYGNALEG--AVTDCKQCPCPNQG------PCVQLDDDQVSNLGNRTRIR-IKSALGGN 72 (190)
Q Consensus 3 ~~C-~C~~g~~G~~C~~C~~g~~g~~c~~--~~~~C~~~~C~~~g------~C~~~~~~~~~~~~~~~~c~-c~~~~~g~ 72 (190)
++| .|++||+|++||+|++||||..+.. ..+.|++++|++++ +|... ...|. |+++|.|.
T Consensus 18 ~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~----------tG~C~~C~~g~~G~ 87 (162)
T 1klo_A 18 VVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRL----------TGECLKCIYNTAGF 87 (162)
T ss_dssp EEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTT----------TCCBCCBCTTEETT
T ss_pred EEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCC----------CCcccCCCCCCcCC
Confidence 579 7999999999999999999987763 34579999999874 33221 14674 88888887
Q ss_pred CCCCccccCCCccCCCCcccCCCCCCCCCCcccCCCcCCC-----CCccCCCCeeeCCCCCCCCCCccCCCCcccCCC
Q psy15473 73 RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA-----DICDAESGRCICQDNTGGDNCERCARGYYGNAL 145 (190)
Q Consensus 73 ~c~~~~~~~~~~~C~~G~~g~~~~~~~~~~C~~c~C~~~~-----~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c 145 (190)
+| +.|++||||..+.......|+++.|+..+ ..|++++|+|+|+++|+|.+|++|++||||...
T Consensus 88 ~C---------e~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd~C~~g~~g~~~ 156 (162)
T 1klo_A 88 YC---------DRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQS 156 (162)
T ss_dssp TT---------CEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCEECTTCBCGGG
T ss_pred Cc---------CcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCCCCCCCcccCCC
Confidence 76 56999999988753234579999998764 279999999999999999999999999999764
No 2
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.84 E-value=7.8e-22 Score=143.04 Aligned_cols=134 Identities=29% Similarity=0.759 Sum_probs=107.8
Q ss_pred CCCCCCCCceecCCcccccCCCceeE-eecCCCCCCCCCCccccCCCccCCCCcccCCCCC-CCCCCcccCCCcCCC---
Q psy15473 38 CPCPNQGPCVQLDDDQVSNLGNRTRI-RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSG-GAFSRCVPCNCNGHA--- 112 (190)
Q Consensus 38 ~~C~~~g~C~~~~~~~~~~~~~~~~c-~c~~~~~g~~c~~~~~~~~~~~C~~G~~g~~~~~-~~~~~C~~c~C~~~~--- 112 (190)
+||+++++|...+.. ....| .|+++|.|.+| +.|++||+|.+... .....|++++|+.++
T Consensus 1 C~C~~~g~C~~~~~~------g~~~C~~C~~g~~G~~C---------e~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~ 65 (162)
T 1klo_A 1 CPCPGGSSCAIVPKT------KEVVCTHCPTGTAGKRC---------ELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPN 65 (162)
T ss_dssp CCSCTTCCEEECSSS------CCEEECSCCTTEESTTS---------CEECTTEEEETTCTTSSCEEEEECCSTTCBCTT
T ss_pred CcCcCcCcccccCCC------CCEEeCCCCCCCcCCCC---------cCCCCCCcCCcccccCCCCCCeeCcCCCCCCcc
Confidence 589999999876531 12578 69999999777 46999999987642 223579999998764
Q ss_pred --CCccCCCCeee-CCCCCCCCCCccCCCCcccCCCC-CCCCCCcCCCCCCCC------CceecCCCCeeeCCCCCCCCC
Q psy15473 113 --DICDAESGRCI-CQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPCPNQG------PCVQLDDDQVVCSECPRGYGG 182 (190)
Q Consensus 113 --~~C~~~~g~C~-C~~g~~G~~C~~C~~G~~g~~c~-~~~~~C~~~~C~~~g------~C~~~~~~~~~C~~C~~G~~G 182 (190)
..|+..+|+|+ |+++|+|.+|++|++||||..+. .....|++++|.+.| +|+.. +++| .|++||+|
T Consensus 66 ~~~~C~~~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~---tG~C-~C~~g~~G 141 (162)
T 1klo_A 66 AVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPV---TGQC-QCLPHVSG 141 (162)
T ss_dssp CSCCBCTTTCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTT---TCCC-CBCTTEES
T ss_pred cCCcccCCCCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCC---CCEe-ECCCCCcC
Confidence 37998999995 99999999999999999999876 334569999998876 67553 3799 99999999
Q ss_pred CCCCCCCC
Q psy15473 183 EKMSPGAQ 190 (190)
Q Consensus 183 ~~C~~c~~ 190 (190)
++|++|++
T Consensus 142 ~~Cd~C~~ 149 (162)
T 1klo_A 142 RDCGTCDP 149 (162)
T ss_dssp TTCCEECT
T ss_pred CCCCCCCC
Confidence 99999875
No 3
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.82 E-value=2.7e-20 Score=157.84 Aligned_cols=181 Identities=22% Similarity=0.478 Sum_probs=81.9
Q ss_pred CceeecCCCCCCCCCccCCCCcccCCCCC----CCCCCcCCCCCCCCC-ceecCCcccc--cCCCceeEeecCCCCCCCC
Q psy15473 2 FRRCICQDNTGGDNCERCARGYYGNALEG----AVTDCKQCPCPNQGP-CVQLDDDQVS--NLGNRTRIRIKSALGGNRT 74 (190)
Q Consensus 2 ~~~C~C~~g~~G~~C~~C~~g~~g~~c~~----~~~~C~~~~C~~~g~-C~~~~~~~~~--~~~~~~~c~c~~~~~g~~c 74 (190)
.++|+|++||+|.+|++|.++|++..+.. ..+.+..+.|+.++. |......... .......+.|..++.|.+|
T Consensus 278 ~g~C~C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~~C~C~~~~~~C~~d~~~c~~~~~~~gg~C~~C~~g~~G~~C 357 (525)
T 4aqs_A 278 HGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNC 357 (525)
T ss_dssp CCEECCCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCCCCCCTTSCSEEEECHHHHHHTTSSCCEEEESCCTTEESTTS
T ss_pred CccccCcCCCcCCCCcCCCCccCCCccCCCcccCCCcccccccCCCCCCCCCCcccccccCccCCCcccCCCCCCCCCCc
Confidence 57899999999999999999999988763 234556677776654 3211100000 0000011122222222111
Q ss_pred C------------------------------------------------------CccccCCCccCCCCcccCCCCCCCC
Q psy15473 75 R------------------------------------------------------GLALTRQTHYQLTGYHHEPTSGGAF 100 (190)
Q Consensus 75 ~------------------------------------------------------~~~~~~~~~~C~~G~~g~~~~~~~~ 100 (190)
+ ....+..++.|++||+|..+.. .
T Consensus 358 e~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~~~~~~~~~~~~C~C~~g~~G~~C~~C~~Gy~G~~c~~--~ 435 (525)
T 4aqs_A 358 EQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAED--P 435 (525)
T ss_dssp CEECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCSCBGGGTBCSSCCCBCTTEETTTTCEECTTEECCCTTS--T
T ss_pred ccccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCCCCCCcCCCCCccCCCCCCCCCcccCCCCCCcCCCCCC--C
Confidence 1 1111233456888888877652 3
Q ss_pred CCcccCCCcCCC-----CCccCCCCeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCceec-CCCCeeeC
Q psy15473 101 SRCVPCNCNGHA-----DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL-DDDQVVCS 174 (190)
Q Consensus 101 ~~C~~c~C~~~~-----~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~~C~~~g~C~~~-~~~~~~C~ 174 (190)
..|.+++|...+ ..|+..+|+|.|+++|+|.+|++|++||+|... +++.|.+++|.++|++... ...+++|
T Consensus 436 ~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~--~~~~C~~C~C~~~gs~~~~C~~~tG~C- 512 (525)
T 4aqs_A 436 YGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSN--DLDGCRPCDCDLGGALNNSCSEDSGQC- 512 (525)
T ss_dssp TSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC----------------------------------------
T ss_pred CCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCC--CCCCCcCCCCCCCCccCCccCCCCCee-
Confidence 568888887543 367778899999999999999999999999753 3467999999998887654 2234789
Q ss_pred CCCCCCCCCCCCC
Q psy15473 175 ECPRGYGGEKMSP 187 (190)
Q Consensus 175 ~C~~G~~G~~C~~ 187 (190)
.|++||+|++||+
T Consensus 513 ~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 513 SCLPHMIGRQCNE 525 (525)
T ss_dssp -------------
T ss_pred ECCCCCcCCCCCC
Confidence 9999999999985
No 4
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.70 E-value=2.2e-17 Score=136.30 Aligned_cols=132 Identities=22% Similarity=0.493 Sum_probs=104.0
Q ss_pred cCCCCcccCCCCCCCCCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCCCccCCCCcccCCCCC
Q psy15473 18 RCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSG 97 (190)
Q Consensus 18 ~C~~g~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~~~~C~~G~~g~~~~~ 97 (190)
.|++||+|+.|+. .|. ||.++|+|.+.. +.|.|+++|.|..|+. .|.++|+|..|.
T Consensus 188 ~C~~g~~G~~C~~---~C~--~C~~~G~C~~~~----------g~C~C~~G~~G~~Ce~--------~C~~g~~g~~C~- 243 (423)
T 2gy5_A 188 RCEAQKWGPECNH---LCT--ACMNNGVCHEDT----------GECICPPGFMGRTCEK--------ACELHTFGRTCK- 243 (423)
T ss_dssp SSCTTEESTTSCE---ECC--CCCTTCEECTTT----------CCEECCTTEESTTSCE--------ECCTTEESTTSC-
T ss_pred cCCCCCCCCCCCC---CCC--CCCCCCEEECCC----------CcEeCCCCccCCCccc--------ccCCCCCCCCcC-
Confidence 5899999988764 343 899999997622 5799999999988732 388899998764
Q ss_pred CCCCCcc-cCCCcCCCCCccCCCCeeeCCCCCCCCCCcc-CCCCcccCCCCCCCCCCcCCCCCCCCCceecCCCCeeeCC
Q psy15473 98 GAFSRCV-PCNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSE 175 (190)
Q Consensus 98 ~~~~~C~-~c~C~~~~~~C~~~~g~C~C~~g~~G~~C~~-C~~G~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~C~~ 175 (190)
..|. ...|..+ ..|+..+++|.|+++|.|..|+. |.+||+|..|+. +++|.++|+|+... .| .
T Consensus 244 ---~~C~~~~~C~~~-g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~------~C~C~ngg~C~~~~----~C-~ 308 (423)
T 2gy5_A 244 ---ERCSGQEGCKSY-VFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKL------RCSCNNGEMCDRFQ----GC-L 308 (423)
T ss_dssp ---EECCSTTTTTTC-CEEETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCC------BCCCTTCCEEETTT----EE-E
T ss_pred ---ccCCCCCCCCCC-CEECCCCCeEEeCCCcccccccCccCCCCcCCcccc------cccCCCCCEecCCC----ce-E
Confidence 2343 1235533 37877789999999999999996 999999988762 56899999998653 49 9
Q ss_pred CCCCCCCCCCCCC
Q psy15473 176 CPRGYGGEKMSPG 188 (190)
Q Consensus 176 C~~G~~G~~C~~c 188 (190)
|++||+|.+|+++
T Consensus 309 C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 309 CSPGWQGLQCERE 321 (423)
T ss_dssp CCTTCBSTTSCBC
T ss_pred CCCCCcCCCCccC
Confidence 9999999999986
No 5
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.56 E-value=5.3e-16 Score=113.07 Aligned_cols=135 Identities=24% Similarity=0.501 Sum_probs=82.2
Q ss_pred cCCCCcccCCCCCCCCCCcC-CCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccC------------CCc
Q psy15473 18 RCARGYYGNALEGAVTDCKQ-CPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTR------------QTH 84 (190)
Q Consensus 18 ~C~~g~~g~~c~~~~~~C~~-~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~------------~~~ 84 (190)
.|++||+|..|+. .|.+ .+|.++++|.. . ..|.|+++|.|..|+...... ...
T Consensus 20 ~C~~g~~G~~C~~---~C~~~~~c~~~g~C~~-~----------g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~~~~C 85 (169)
T 2vj2_A 20 TCDDYYYGFGCNK---FCRPRDDFFGHYACDQ-N----------GNKTCMEGWMGPECNRAICRQGCSPKHGSCKLPGDC 85 (169)
T ss_dssp -CCTTEETTTTCE---ECCCEEETTEEEEECS-S----------CCEEECTTEESTTSCEECCCTTCCTTTEECSSTTCC
T ss_pred eCCCcCcCCCccc---ccCCCCCcCCCCEeCC-C----------CeeECCCCCcCCCCCCCCCCCCCCCCCcccCCCCee
Confidence 4555566555542 2443 25666777742 1 467888888887665321111 112
Q ss_pred cCCCCcccCCCCCCCCCCcccCC-CcCCCCCccCCCCeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcC-CCCCCCCC
Q psy15473 85 YQLTGYHHEPTSGGAFSRCVPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ-CPCPNQGP 162 (190)
Q Consensus 85 ~C~~G~~g~~~~~~~~~~C~~c~-C~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~-~~C~~~g~ 162 (190)
.|++||+|..++. |...+ |. ++ +|. ..++| .|++||.|..|+.++++|.. .+|.++|+
T Consensus 86 ~C~~G~~G~~C~~-----C~~~~~C~-~g-~C~-~~~~C------------~C~~G~~G~~C~~~~~~C~~~~~C~~~g~ 145 (169)
T 2vj2_A 86 RCQYGWQGLYCDK-----CIPHPGCV-HG-ICN-EPWQC------------LCETNWGGQLCDKDLNYCGTHQPCLNGGT 145 (169)
T ss_dssp EECTTEESSSSCE-----ECCCTTCS-SE-ECS-STTCC------------EECTTEETTTTCEESCHHHHTCCCCTTCE
T ss_pred ECCCCCCCCCccc-----CCCCCCCC-CC-CcC-CCCEE------------eCCCCCCCCcccCCCCCCCCCCCCCCCCE
Confidence 4788888877642 33222 33 22 443 12334 45566666666555677874 78999999
Q ss_pred ceecCCCCeeeCCCCCCCCCCCCCC
Q psy15473 163 CVQLDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 163 C~~~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
|+....+.++| .|++||+|.+|+.
T Consensus 146 C~~~~~~~~~C-~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 146 CSNTGPDKYQC-SCPEGYSGPNCEI 169 (169)
T ss_dssp EEECSTTCEEE-ECCTTCCSTTSCC
T ss_pred EcCCCCCCcEe-ECCCCCcCcCcCC
Confidence 99863467999 9999999999974
No 6
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.55 E-value=1e-14 Score=102.36 Aligned_cols=113 Identities=28% Similarity=0.669 Sum_probs=78.3
Q ss_pred CCCCCc--CCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCCCccCCCCcccCCCCCCCCCCcccCCC
Q psy15473 31 AVTDCK--QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNC 108 (190)
Q Consensus 31 ~~~~C~--~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~~~~C~~G~~g~~~~~~~~~~C~~c~C 108 (190)
++++|. +.||.++++|++..+. +.|. |++||+|..++. .++.|...+|
T Consensus 4 dideC~~~~~~C~~~g~C~~~~g~--------~~C~---------------------C~~Gy~G~~C~~-~~~~C~~~~C 53 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINTLGS--------FECQ---------------------CLQGYTGPRCEI-DVNECVSNPC 53 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEECSSS--------EEEE---------------------CCTTEESTTSCE-ECCTTTTCCC
T ss_pred ccccccCCCCCCCCCCEeECCCCC--------EEEE---------------------CCCCCcCCcccc-cCccCCCCCC
Confidence 567898 6899999999987654 3454 555666655542 2466766667
Q ss_pred cCCCCCccCCCCeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCceecCCCCeeeCCCCCCCCCCCCC
Q psy15473 109 NGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMS 186 (190)
Q Consensus 109 ~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~C~ 186 (190)
..++ +|....+ +..| .|++||.|..|+.++++|.+.+|.++|+|++.. +.++| .|++||+|.+|+
T Consensus 54 ~~~~-~C~~~~g---------~~~C-~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~-g~~~C-~C~~G~~G~~C~ 118 (135)
T 2vj3_A 54 QNDA-TCLDQIG---------EFQC-ICMPGYEGVHCEVNTDECASSPCLHNGRCLDKI-NEFQC-ECPTGFTGHLCQ 118 (135)
T ss_dssp CSSC-EEEECSS---------CEEE-ECCTTEESSSSCEECCTTTTCCSTTTCEEEECS-SCEEE-ECCTTEESSSSC
T ss_pred CCCC-EEeCCCC---------Ccee-eCCCCCcCCcceecCCcccCCCcCCCCEeECCC-CCeEE-ECCCCCcCCccC
Confidence 6443 6654322 2233 345555555555556778888999999999875 66999 999999999996
No 7
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.52 E-value=2.5e-14 Score=101.21 Aligned_cols=134 Identities=23% Similarity=0.516 Sum_probs=82.4
Q ss_pred CCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCCCccCCCCcccCCCCCCCCCCcccCCCcCCC
Q psy15473 33 TDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA 112 (190)
Q Consensus 33 ~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~~~~C~~G~~g~~~~~~~~~~C~~c~C~~~~ 112 (190)
|+|.+.||.++++|++.... ..+.|.|+++|.|..|+.... +... ...+. ..+.|.+.+|..++
T Consensus 1 d~C~~~pC~~~g~C~~~~~~------g~~~C~C~~G~~G~~C~~~~~------~~~~--~~~c~--~~~~C~~~~C~~~g 64 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLAD------GSFSCECPDGFTDPNCSSVVE------VASD--EEEPT--SAGPCTPNPCHNGG 64 (143)
T ss_dssp --CCSCCCGGGCEEEC-----------CCEEECCTTCCTTTTCSCCC------CTTT--TTSCC--CCCTTSSCCCCTTC
T ss_pred CcCCCCcCCCCCEeeCCCCC------CCEEeECCCCCCCCCCccCcc------cccc--ccccc--cCCcCCCCCCCCCC
Confidence 46889999999999875421 125788888888877654221 1110 01111 23567666676444
Q ss_pred CCccCCCCeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCceecCCCCeeeCCCCCCCCCCCCCCC
Q psy15473 113 DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPG 188 (190)
Q Consensus 113 ~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~C~~c 188 (190)
.|....+. ......+..| .|++||.|..|+.++++|.+.+|.++++|++.. +.++| .|++||+|++|+.-
T Consensus 65 -~C~~~~~~--~~~~~~~~~C-~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~-g~~~C-~C~~G~~G~~c~~~ 134 (143)
T 4d90_A 65 -TCEISEAY--RGDTFIGYVC-KCPRGFNGIHCQHNINECEVEPCKNGGICTDLV-ANYSC-ECPGEFMGRNCQYK 134 (143)
T ss_dssp -EEEECCCE--ETTEECCEEE-ECCTTEESTTSCEECCTTTTCCSCTTCEEEEET-TEEEE-ECCTTCBSTTSCBC
T ss_pred -EecCCCcc--ccCCCCCeEe-ECcCCCcCCCcccCCCcCCCCCCCCCCEeECCC-CCeEe-ECCCCCccCCceec
Confidence 55421100 0011123344 456666666666667889988999999999875 66999 99999999999753
No 8
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.49 E-value=2.9e-14 Score=113.88 Aligned_cols=132 Identities=23% Similarity=0.473 Sum_probs=41.5
Q ss_pred cCCCCcccCCCCCCCCCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCcccc-----------CCCccC
Q psy15473 18 RCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALT-----------RQTHYQ 86 (190)
Q Consensus 18 ~C~~g~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~-----------~~~~~C 86 (190)
.|++||+|..|+.+ .|.+ +|.++|+|+.. ..|.|+++|.|..|+..... .....|
T Consensus 168 ~C~~G~~G~~C~~~--~C~~-~C~~~G~C~~~-----------~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C 233 (324)
T 2ygq_A 168 ECPDGFHGPHCEKA--LCTP-RCMNGGLCVTP-----------GFCICPPGFYGVNCDKANCSTTCFNGGTCFYPGKCIC 233 (324)
T ss_dssp ECCTTEESSSSCEE--SSSS-CCCTTCEECSS-----------CCEECCTTCBTTTTCBCCCSSCCCSSCCBSCSSCBCC
T ss_pred ECCCCCcCCCCCCC--CCCC-CCCCCCEEcCC-----------CEEeCCCCccCCCcccCcCCCCCCCCCeeCCCCeeeC
Confidence 57777777776642 4653 78888888641 46888888888776532111 112347
Q ss_pred CCCcccCCCCCCCCCCcccCCCcCCCCCccCCCCeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCceec
Q psy15473 87 LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166 (190)
Q Consensus 87 ~~G~~g~~~~~~~~~~C~~c~C~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~~C~~~g~C~~~ 166 (190)
++||+|..|+. +.|. .+|.+++ .|.. .++|.|++||.|..|+ . +.|. .+|.++|+|+..
T Consensus 234 ~~G~~G~~C~~---~~C~-~~C~~~g-~C~~-~~~C~C~~G~~G~~C~------------~--~~C~-~~C~~~g~C~~~ 292 (324)
T 2ygq_A 234 PPGLEGEQCEI---SKCP-QPCRNGG-KCIG-KSKCKCSKGYQGDLCS------------K--PVCE-PGCGAHGTCHEP 292 (324)
T ss_dssp CTTCCTTTTC----------------------------------------------------------------------
T ss_pred CCCccCCCCCc---CcCC-CcCCCCC-EECC-CCEEECCCCCcCCCCc------------C--CCCC-CCCCCCCEECCC
Confidence 78888877753 3443 3455333 5643 3456666666555553 2 2354 368889999862
Q ss_pred CCCCeeeCCCCCCCCCCCCCCCC
Q psy15473 167 DDDQVVCSECPRGYGGEKMSPGA 189 (190)
Q Consensus 167 ~~~~~~C~~C~~G~~G~~C~~c~ 189 (190)
++| .|++||+|.+|++..
T Consensus 293 ----~~C-~C~~G~~G~~C~~~~ 310 (324)
T 2ygq_A 293 ----NKC-QCQEGWHGRHCNKRY 310 (324)
T ss_dssp -----------------------
T ss_pred ----CEe-ECCCCCcCCCCCCCC
Confidence 799 999999999998754
No 9
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.46 E-value=5.1e-14 Score=116.20 Aligned_cols=105 Identities=25% Similarity=0.519 Sum_probs=82.6
Q ss_pred CceeecCCCCCCCCCcc-CCCCcccCCCCCCCCCCc-CCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccc
Q psy15473 2 FRRCICQDNTGGDNCER-CARGYYGNALEGAVTDCK-QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLAL 79 (190)
Q Consensus 2 ~~~C~C~~g~~G~~C~~-C~~g~~g~~c~~~~~~C~-~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~ 79 (190)
.++|+|++||+|.+|+. |.++|+|..|.. .|. ..+|.+++.|... .+.|.|+++|.|..|+.
T Consensus 215 ~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~---~C~~~~~C~~~g~C~~~----------~~~C~C~~G~~G~~C~~--- 278 (423)
T 2gy5_A 215 TGECICPPGFMGRTCEKACELHTFGRTCKE---RCSGQEGCKSYVFCLPD----------PYGCSCATGWKGLQCNE--- 278 (423)
T ss_dssp TCCEECCTTEESTTSCEECCTTEESTTSCE---ECCSTTTTTTCCEEETT----------TTEEECCBTCBSGGGCB---
T ss_pred CCcEeCCCCccCCCcccccCCCCCCCCcCc---cCCCCCCCCCCCEECCC----------CCeEEeCCCcccccccC---
Confidence 47899999999999996 999999988763 455 3467777777532 26899999999987742
Q ss_pred cCCCccCCCCcccCCCCCCCCCCcccCCCcCCCCCccCCCCeeeCCCCCCCCCCccC
Q psy15473 80 TRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERC 136 (190)
Q Consensus 80 ~~~~~~C~~G~~g~~~~~~~~~~C~~c~C~~~~~~C~~~~g~C~C~~g~~G~~C~~C 136 (190)
.|++||+|..|+. +++|.+++ .|+...+ |.|+++|+|.+|+.+
T Consensus 279 -----~C~~G~~G~~C~~-------~C~C~ngg-~C~~~~~-C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 279 -----ACHPGFYGPDCKL-------RCSCNNGE-MCDRFQG-CLCSPGWQGLQCERE 321 (423)
T ss_dssp -----CCCTTBCSBTTCC-------BCCCTTCC-EEETTTE-EECCTTCBSTTSCBC
T ss_pred -----ccCCCCcCCcccc-------cccCCCCC-EecCCCc-eECCCCCcCCCCccC
Confidence 4999999987752 35687544 8987655 999999999999876
No 10
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.42 E-value=8e-14 Score=118.16 Aligned_cols=117 Identities=24% Similarity=0.575 Sum_probs=54.8
Q ss_pred CceeecCCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccC
Q psy15473 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTR 81 (190)
Q Consensus 2 ~~~C~C~~g~~G~~C~~C~~g~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~ 81 (190)
.+.|.|.++|.|.+|++|++||+|..++. .+.|.+++|+++++|.+...-. .....|.|+++|.|..|
T Consensus 406 ~~~C~C~~g~~G~~C~~C~~Gy~G~~c~~-~~~C~~C~C~~~gtc~~~~~Cd----~~tg~C~C~~g~~G~~C------- 473 (525)
T 4aqs_A 406 AGQCRCKLHVEGERCDVCKEGFYDLSAED-PYGCKSCACNPLGTIPGGNPCD----SETGYCYCKRLVTGQRC------- 473 (525)
T ss_dssp SSCCCBCTTEETTTTCEECTTEECCCTTS-TTSSEECCCCTTTBCCSSCCBC----TTTCCBCBCTTCCSTTT-------
T ss_pred CCccCCCCCCCCCcccCCCCCCcCCCCCC-CCCCccCCCCCCceecCCCccc----CCCCEEECCCCCcCCCc-------
Confidence 46799999999999999999999998864 4579999999988876543210 01247899999999776
Q ss_pred CCccCCCCcccCCCCCCCCCCcccCCCcCCC---CCccCCCCeeeCCCCCCCCCCcc
Q psy15473 82 QTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA---DICDAESGRCICQDNTGGDNCER 135 (190)
Q Consensus 82 ~~~~C~~G~~g~~~~~~~~~~C~~c~C~~~~---~~C~~~~g~C~C~~g~~G~~C~~ 135 (190)
+.|++||++.... .+.|++++|...+ ..|+..+|+|.|++||+|.+|++
T Consensus 474 --e~C~~G~~g~~~~---~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 474 --DQCLPQHWGLSND---LDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp --CC-----------------------------------------------------
T ss_pred --ccCCCCccCCCCC---CCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 4699999987542 3678888888654 35777788999999999998863
No 11
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.39 E-value=2.9e-13 Score=117.27 Aligned_cols=57 Identities=19% Similarity=0.502 Sum_probs=35.5
Q ss_pred ceeecCCCCCCCCCccCCCCcccCCCCCCCCCCcC----CCCCCCCCceecCCcccccCCCceeEeec----CCCCCCCC
Q psy15473 3 RRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ----CPCPNQGPCVQLDDDQVSNLGNRTRIRIK----SALGGNRT 74 (190)
Q Consensus 3 ~~C~C~~g~~G~~C~~C~~g~~g~~c~~~~~~C~~----~~C~~~g~C~~~~~~~~~~~~~~~~c~c~----~~~~g~~c 74 (190)
|.|.|.+||+|.+| .+..++++... .++|.. .+|.++|+|+. ..|.|+ ++|.|..|
T Consensus 458 G~C~C~~Gy~G~~C-e~~~~~~~~~~---~~~C~~~~~~~~Cs~~G~C~~------------g~C~C~~~~~~Gy~G~~C 521 (690)
T 3fcs_B 458 GVCRCGPGWLGSQC-ECSEEDYRPSQ---QDECSPREGQPVCSQRGECLC------------GQCVCHSSDFGKITGKYC 521 (690)
T ss_dssp TEEEECTTCCSSSS-CCSCC---------CCCCSSSSSSCGGGGSEEECS------------SSEEECCCSSCCCBSTTS
T ss_pred CceEeCCCccCCce-eeccCccCCcc---CCcCCCCCCCCCCCCCCEEEC------------CeeEeecCCCCCeeCCCc
Confidence 55778888888877 45555544322 245775 35999999873 358887 77777666
Q ss_pred C
Q psy15473 75 R 75 (190)
Q Consensus 75 ~ 75 (190)
+
T Consensus 522 e 522 (690)
T 3fcs_B 522 E 522 (690)
T ss_dssp C
T ss_pred C
Confidence 4
No 12
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=99.36 E-value=5.5e-13 Score=108.47 Aligned_cols=94 Identities=29% Similarity=0.709 Sum_probs=68.4
Q ss_pred CceeecCCCCCCCCCccCCCCcccCCCC----CCCCCCcCCCCCCCCC-ceecCCcccccCCCceeEeecCCCCCCCCCC
Q psy15473 2 FRRCICQDNTGGDNCERCARGYYGNALE----GAVTDCKQCPCPNQGP-CVQLDDDQVSNLGNRTRIRIKSALGGNRTRG 76 (190)
Q Consensus 2 ~~~C~C~~g~~G~~C~~C~~g~~g~~c~----~~~~~C~~~~C~~~g~-C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~ 76 (190)
.++|.|++||+|++||+|++||+|..+. ...++|++|+|+++++ |......
T Consensus 285 ~g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~------------------------ 340 (403)
T 2y38_A 285 RLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEV------------------------ 340 (403)
T ss_dssp CEEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHH------------------------
T ss_pred ceEeECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCccc------------------------
Confidence 4679999999999999999999999874 3457899999998875 4321100
Q ss_pred ccccCCCccCCCCcccCCCCCCCCCCcccCCCcCCCCCccCCCCeee-CCCCCCCCCCccCCCCcccCCCC
Q psy15473 77 LALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALE 146 (190)
Q Consensus 77 ~~~~~~~~~C~~G~~g~~~~~~~~~~C~~c~C~~~~~~C~~~~g~C~-C~~g~~G~~C~~C~~G~~g~~c~ 146 (190)
|. . ..+...+.+...+|.|. |+++++|.+|++|++||||.+..
T Consensus 341 -------------~~-~-------------~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC~~GYyg~p~~ 384 (403)
T 2y38_A 341 -------------DR-R-------------EASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQ 384 (403)
T ss_dssp -------------HH-T-------------TCCCCTTSCSCCCEEESSCCSSEESTTSCEECTTCEECTTS
T ss_pred -------------cc-c-------------cccccccccCCCCCCCCCCcCcCcCCCCCcCCCCccCCCCC
Confidence 00 0 00011112334578995 99999999999999999998765
No 13
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.34 E-value=1.4e-12 Score=112.83 Aligned_cols=117 Identities=19% Similarity=0.409 Sum_probs=69.3
Q ss_pred CceeecCCCCCCCCCccCCCCcccCCCCCCCCCCcCC----CCCCCCCceecCCcccccCCCceeEeec------CCCCC
Q psy15473 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC----PCPNQGPCVQLDDDQVSNLGNRTRIRIK------SALGG 71 (190)
Q Consensus 2 ~~~C~C~~g~~G~~C~~C~~g~~g~~c~~~~~~C~~~----~C~~~g~C~~~~~~~~~~~~~~~~c~c~------~~~~g 71 (190)
.+.|.|.+||+|.+|+ |..++++..... ..|... +|.++|+|.. ..|.|+ ++|.|
T Consensus 445 ~g~C~C~~Gy~G~~Ce-c~~~~~~~~~~~--~~C~~~~~~~~Cs~~G~C~~------------G~C~C~~~~~~~~G~~G 509 (687)
T 3k6s_B 445 CGICRCDTGYIGKNCE-CQTQGRSSQELE--GSCRKDNNSIICSGLGDCVC------------GQCLCHTSDVPGKLIYG 509 (687)
T ss_dssp SSSEEECSSEESTTSC-EESSSCCCSGGG--STTSSSTTSCGGGSSEEEET------------TEEEECCCCSTTCCEES
T ss_pred CCEeEcCCCCcCCccc-ccCCcCCccccC--CCCCCCCCCCcCCCCCEEeC------------CEEEcCCCCCCCCCccc
Confidence 4678888888888886 666655432111 136543 4999999873 368888 77888
Q ss_pred CCCCC--cccc----------------CCCccCCCCcccCCCCCC-CCCCcccC---CCcCCCCCccCCCCeeeCCCCCC
Q psy15473 72 NRTRG--LALT----------------RQTHYQLTGYHHEPTSGG-AFSRCVPC---NCNGHADICDAESGRCICQDNTG 129 (190)
Q Consensus 72 ~~c~~--~~~~----------------~~~~~C~~G~~g~~~~~~-~~~~C~~c---~C~~~~~~C~~~~g~C~C~~g~~ 129 (190)
..|+. .... .....|.+||+|..|+.. ....|... .|.+++ .|.. ++|.|++||+
T Consensus 510 ~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G-~C~~--g~C~C~~Gy~ 586 (687)
T 3k6s_B 510 QYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRG-RCRC--NVCECHSGYQ 586 (687)
T ss_dssp TTSCEESSCSCEETTEETSHHHHEEEETTEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSC-CBCS--SCBCCSTTCC
T ss_pred cccccccccccCCCCcCcCCCCCCeEECCEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCC-cCCC--CEEECCCCCc
Confidence 77651 1110 011246777777777521 13455542 465444 5643 5666666666
Q ss_pred CCCCccC
Q psy15473 130 GDNCERC 136 (190)
Q Consensus 130 G~~C~~C 136 (190)
|..|+.|
T Consensus 587 G~~Ce~c 593 (687)
T 3k6s_B 587 LPLCQEC 593 (687)
T ss_dssp TTTTCCC
T ss_pred CCCCCCC
Confidence 6666554
No 14
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.30 E-value=5.7e-16 Score=119.28 Aligned_cols=167 Identities=9% Similarity=-0.063 Sum_probs=101.8
Q ss_pred ceeecCCCCCCCCCc---------------cCCCC---cccCCCCCCCCCCcCCCCCCCCCceecCCcccccCCCceeEe
Q psy15473 3 RRCICQDNTGGDNCE---------------RCARG---YYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64 (190)
Q Consensus 3 ~~C~C~~g~~G~~C~---------------~C~~g---~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~ 64 (190)
..|.|+.||+|++|| .|..| |.|..++.. ++|.+.||+++++|++.... +.|.
T Consensus 53 y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~-~eC~s~pC~ngG~C~~~~~s--------y~C~ 123 (267)
T 4fbr_A 53 YNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQN-IVAVSIKSNDGGKTLTGTTT--------YNGE 123 (267)
T ss_dssp ETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCC-EEEEEEECSSTTSEEEEEEE--------ETTS
T ss_pred eEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccc-cccCCCCCCCCCEEecCCcc--------EEee
Confidence 457888888888886 24443 345666554 37888888888888876644 6788
Q ss_pred ecCCCCCCCCCCcccc---------CCCccCCCCcccCCCCCCCCCCcccCCCcCCCCCccCC--CCeeeCCCCCCCCCC
Q psy15473 65 IKSALGGNRTRGLALT---------RQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE--SGRCICQDNTGGDNC 133 (190)
Q Consensus 65 c~~~~~g~~c~~~~~~---------~~~~~C~~G~~g~~~~~~~~~~C~~c~C~~~~~~C~~~--~g~C~C~~g~~G~~C 133 (190)
|+.+|.|..|+..... ..+..+...|.|.+++.. ..|.+.+|.+++ .|... +..|.|+++|+|.+|
T Consensus 124 C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~--i~c~~~~c~ngg-~C~dg~~~y~C~Cp~Gf~G~~c 200 (267)
T 4fbr_A 124 GPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQN--VINVDAKSNDGG-KTLSGTMTYNGEGPIGFRGTLT 200 (267)
T ss_dssp CCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSC--EEEEEEECSSTT-SEEEEEEEETTSCCEEEEEEEE
T ss_pred CCCCccccCCCCCcccccccCCcCCccccCCcceecccccccc--cccCCCCCCCCC-EeeCCCCCeEEeCCCCcccccc
Confidence 9999999888765432 112222333556666532 234455666444 66532 246888888888877
Q ss_pred cc---------------CCCC-cccCCCCCCCCC-CcCCCCCCCCCceecCCCCeeeCCCCCCCCCC
Q psy15473 134 ER---------------CARG-YYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183 (190)
Q Consensus 134 ~~---------------C~~G-~~g~~c~~~~~~-C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~ 183 (190)
+. |..+ .+-..+....+. ....+|.++|+|++.+ .+|+| .||+||+|.
T Consensus 201 ~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGtC~dg~-~sy~C-eCp~GF~G~ 265 (267)
T 4fbr_A 201 SPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDGGKTLAGT-MIYNG-EGPIGFRAR 265 (267)
T ss_dssp ETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSSTTSEEEEE-EEETT-SCCEEEEEE
T ss_pred ccccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCCCEeeCCC-cceee-cCCCCcccc
Confidence 61 1111 111111111111 0123788999999976 56999 999999985
No 15
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.27 E-value=5.1e-14 Score=104.00 Aligned_cols=137 Identities=18% Similarity=0.383 Sum_probs=82.7
Q ss_pred CCCCccCCCCcccC---CCCCCCCCCc----CCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCCCcc
Q psy15473 13 GDNCERCARGYYGN---ALEGAVTDCK----QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHY 85 (190)
Q Consensus 13 G~~C~~C~~g~~g~---~c~~~~~~C~----~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~~~~ 85 (190)
+..| .|++||+|. .|+ ++++|. ..||.++++|++..... ....+.|.|+++
T Consensus 24 ~~~C-~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~---~~g~y~C~C~~G----------------- 81 (186)
T 1z1y_A 24 HFXC-MCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPA---QVNMYXCGCIEG----------------- 81 (186)
T ss_dssp CEEE-EECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTT---SSCSEEEEECTT-----------------
T ss_pred CeEe-ECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCc---CCCCEECCCCCC-----------------
Confidence 3456 578888776 555 467898 78899999999876200 000145665554
Q ss_pred CCCCcccCCCCCCCCCCcccCCCcCCCCCcc----CCC--CeeeCCCCCCCCCCccCCCCcccCCCCC-CCCCCcCCCC-
Q psy15473 86 QLTGYHHEPTSGGAFSRCVPCNCNGHADICD----AES--GRCICQDNTGGDNCERCARGYYGNALEG-AVTDCKQCPC- 157 (190)
Q Consensus 86 C~~G~~g~~~~~~~~~~C~~c~C~~~~~~C~----~~~--g~C~C~~g~~G~~C~~C~~G~~g~~c~~-~~~~C~~~~C- 157 (190)
|.|..+.. .++.|...+|..++ .|. ... ..|.|++||.|... -+..|+. ++++|.. +|
T Consensus 82 ----~~g~~~~C-~~d~C~~~~C~~~g-~C~~~~~~~~g~~~C~C~~Gy~g~~~-------~~~~C~~~~~~~C~~-~C~ 147 (186)
T 1z1y_A 82 ----YTLXEDTC-VLDVCQYXNCGESG-ECIVEYLSEIQSAGCSCAIGXVPNPE-------DEXXCTXTGETACQL-XCN 147 (186)
T ss_dssp ----EEEETTEE-EEGGGTTCCCCTTE-EEEEEEETTEEEEEEEECTEEEEETT-------TTTEEEEEECCCCCC-CCC
T ss_pred ----CccCCCCC-CCCcCcCCCCCCCC-EEeeCCcCCCCCceEECCCCCcccCC-------CCCcceEcCCCcccc-ccc
Confidence 44443211 12456555566433 664 322 25666666555110 0023332 1356764 89
Q ss_pred CCCCCceecCCCCeeeCCCCCCCCCCCCCC
Q psy15473 158 PNQGPCVQLDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 158 ~~~g~C~~~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
.++++|++.. +.++| .|++||+|..+++
T Consensus 148 ~~~~~C~n~~-g~y~C-~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 148 TDNEVCXNVE-GVYXC-QCMEGFTFDXEXN 175 (186)
T ss_dssp TTTEEEEEET-TEEEE-EECTTCEEETTTT
T ss_pred ccCcceecCC-CCeee-ECCCCCccCcccc
Confidence 8889999876 67999 9999999998864
No 16
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=99.17 E-value=2.2e-11 Score=99.05 Aligned_cols=87 Identities=31% Similarity=0.740 Sum_probs=69.2
Q ss_pred ccCCCcCCCCCccCC------CCeeeCCCCCCCCCCccCCCCcccCCC----CCCCCCCcCCCCCCCCC-ceec------
Q psy15473 104 VPCNCNGHADICDAE------SGRCICQDNTGGDNCERCARGYYGNAL----EGAVTDCKQCPCPNQGP-CVQL------ 166 (190)
Q Consensus 104 ~~c~C~~~~~~C~~~------~g~C~C~~g~~G~~C~~C~~G~~g~~c----~~~~~~C~~~~C~~~g~-C~~~------ 166 (190)
.+|.|++|+..|+.. +++|.|+++++|..|++|++||+|.+- ....+.|.+|+|+++++ |+..
T Consensus 264 g~C~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~ 343 (403)
T 2y38_A 264 GRCVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRR 343 (403)
T ss_dssp EECCCTTBCSCEEESCTTSTTCEEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHT
T ss_pred cccccCCCccccCCCCCCCccceEeECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccc
Confidence 457899999889742 467999999999999999999999753 23456799999988775 7421
Q ss_pred ---------CCCCeeeCCCCCCCCCCCCCCCCC
Q psy15473 167 ---------DDDQVVCSECPRGYGGEKMSPGAQ 190 (190)
Q Consensus 167 ---------~~~~~~C~~C~~G~~G~~C~~c~~ 190 (190)
..+.++|..|+.++.|.+||+|++
T Consensus 344 ~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC~~ 376 (403)
T 2y38_A 344 EASQNQDNVYQGGGVCLDCQHHTTGINCERCLP 376 (403)
T ss_dssp TCCCCTTSCSCCCEEESSCCSSEESTTSCEECT
T ss_pred cccccccccCCCCCCCCCCcCcCcCCCCCcCCC
Confidence 124589944999999999999975
No 17
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.16 E-value=2.1e-11 Score=85.33 Aligned_cols=98 Identities=21% Similarity=0.502 Sum_probs=61.6
Q ss_pred CCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCCCccCCCCccc
Q psy15473 13 GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHH 92 (190)
Q Consensus 13 G~~C~~C~~g~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~~~~C~~G~~g 92 (190)
+..| .|++||+|..|+.++++|...||.++++|++..+. +.|. |++||.|
T Consensus 27 ~~~C-~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~--------~~C~---------------------C~~G~~G 76 (135)
T 2vj3_A 27 SFEC-QCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGE--------FQCI---------------------CMPGYEG 76 (135)
T ss_dssp SEEE-ECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSC--------EEEE---------------------CCTTEES
T ss_pred CEEE-ECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCC--------ceee---------------------CCCCCcC
Confidence 3456 78999999999878889999999999999987653 3454 4556666
Q ss_pred CCCCCCCCCCcccCCCcCCCCCccCCCC--eeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcC
Q psy15473 93 EPTSGGAFSRCVPCNCNGHADICDAESG--RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154 (190)
Q Consensus 93 ~~~~~~~~~~C~~c~C~~~~~~C~~~~g--~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~ 154 (190)
..++. .++.|...+|..++ .|....+ .|.|++ ||.|..|+.++++|..
T Consensus 77 ~~C~~-~~~~C~~~~C~~~g-~C~~~~g~~~C~C~~------------G~~G~~C~~~i~~C~~ 126 (135)
T 2vj3_A 77 VHCEV-NTDECASSPCLHNG-RCLDKINEFQCECPT------------GFTGHLCQVDLHHILD 126 (135)
T ss_dssp SSSCE-ECCTTTTCCSTTTC-EEEECSSCEEEECCT------------TEESSSSCEECC----
T ss_pred Cccee-cCCcccCCCcCCCC-EeECCCCCeEEECCC------------CCcCCccCccCccccC
Confidence 55542 23567666676443 6654332 555555 4555555545555653
No 18
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.15 E-value=2.5e-14 Score=110.13 Aligned_cols=163 Identities=13% Similarity=0.037 Sum_probs=113.2
Q ss_pred CCCCCCCCccCCCC---cccCCCCCCCCCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCcccc-----
Q psy15473 9 DNTGGDNCERCARG---YYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALT----- 80 (190)
Q Consensus 9 ~g~~G~~C~~C~~g---~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~----- 80 (190)
..|-|..+ .+.+| +.|..++.++..+.. +|.++|+|++.... +.|.|+.+|.|.+|+.....
T Consensus 8 n~~Gg~s~-~~~pgg~~~~g~~~~~n~~~~~~-~c~ngG~C~~g~~~--------y~C~Cp~Gf~G~~Ce~ni~ec~~~~ 77 (267)
T 4fbr_A 8 NQWGGSQA-TWNPGGLWLIGARDKQNVVALDI-KSDDGGKTLKGTMT--------YNGEGPIGFRGTLSSANNYTVENQW 77 (267)
T ss_dssp EECSSTTS-CCEEEEEEECCCCSSCCEEEEEE-ECSSTTSEEEEEEE--------ETTSCCEEEEEEECSTTEEEEEEES
T ss_pred ecCCcccC-CcCCCCceeeccccccccccCCC-CcCCCCeecCCCCC--------eEEeCCCCccccccccccccccccc
Confidence 33455555 45566 566666666545444 89999999998765 68999999999988765443
Q ss_pred -CCCccCCCC---cccCCCCCCCCCCcccCCCcCCCCCccCC--CCeeeCCCCCCCCCCc---------------cCCCC
Q psy15473 81 -RQTHYQLTG---YHHEPTSGGAFSRCVPCNCNGHADICDAE--SGRCICQDNTGGDNCE---------------RCARG 139 (190)
Q Consensus 81 -~~~~~C~~G---~~g~~~~~~~~~~C~~c~C~~~~~~C~~~--~g~C~C~~g~~G~~C~---------------~C~~G 139 (190)
.....|.+| |.|..++. ..+|.+.+|.+.+ +|... +.+|.|+++|+|.+|+ .|..+
T Consensus 78 ~c~s~pC~nggtc~~G~~c~~--~~eC~s~pC~ngG-~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ng 154 (267)
T 4fbr_A 78 GGTSAPWQPGGVWVLGARDKQ--NIVAVSIKSNDGG-KTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSG 154 (267)
T ss_dssp SSTTSCEEEEEEEECCCCSSC--CEEEEEEECSSTT-SEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEE
T ss_pred CcCCCcccCCCeeeccCcccc--ccccCCCCCCCCC-EEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCC
Confidence 222345554 45666654 3578888888555 77543 3588999999999887 13332
Q ss_pred ---cccCCCCCCCCCCcCCCCCCCCCceecCCCCeeeCCCCCCCCCCCCCC
Q psy15473 140 ---YYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 140 ---~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
|.|..++..+ .|.+.+|.++|+|++.. .+|+| .|++||+|.+|+.
T Consensus 155 g~c~~G~~c~~~i-~c~~~~c~ngg~C~dg~-~~y~C-~Cp~Gf~G~~c~~ 202 (267)
T 4fbr_A 155 GVWVLGTRGKQNV-INVDAKSNDGGKTLSGT-MTYNG-EGPIGFRGTLTSP 202 (267)
T ss_dssp EEEECCSSTTSCE-EEEEEECSSTTSEEEEE-EEETT-SCCEEEEEEEEET
T ss_pred cceeccccccccc-ccCCCCCCCCCEeeCCC-CCeEE-eCCCCcccccccc
Confidence 3466666543 25566899999999876 56999 9999999998863
No 19
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.13 E-value=4.2e-11 Score=95.61 Aligned_cols=116 Identities=26% Similarity=0.600 Sum_probs=52.3
Q ss_pred CCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCcccc-----------CCCccCCCCcccCCCCCCCCCC
Q psy15473 34 DCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALT-----------RQTHYQLTGYHHEPTSGGAFSR 102 (190)
Q Consensus 34 ~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~-----------~~~~~C~~G~~g~~~~~~~~~~ 102 (190)
.| +.+|.++|+|... ..|.|+++|.|..|+..... .....|++||+|..|+. ..
T Consensus 150 ~C-~~~C~~~G~C~~~-----------~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~---~~ 214 (324)
T 2ygq_A 150 EC-PGGCRNGGFCNER-----------RICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDK---AN 214 (324)
T ss_dssp CC-SSCCCSSCEECTT-----------SCEECCTTEESSSSCEESSSSCCCTTCEECSSCCEECCTTCBTTTTCB---CC
T ss_pred CC-CCCCCCCCEECCC-----------CeEECCCCCcCCCCCCCCCCCCCCCCCEEcCCCEEeCCCCccCCCccc---Cc
Confidence 45 3579999998641 46899999988776532111 11234888898888863 34
Q ss_pred cccCCCcCCCCCccCCCCeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCceecCCCCeeeCCCCCCCCC
Q psy15473 103 CVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182 (190)
Q Consensus 103 C~~c~C~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G 182 (190)
|. .+|.+++ +|.. ++.|.|+++|+|..|+. +.|. .+|.++|+|.. .++| .|++||.|
T Consensus 215 C~-~~C~~~G-~C~~-~~~C~C~~G~~G~~C~~--------------~~C~-~~C~~~g~C~~----~~~C-~C~~G~~G 271 (324)
T 2ygq_A 215 CS-TTCFNGG-TCFY-PGKCICPPGLEGEQCEI--------------SKCP-QPCRNGGKCIG----KSKC-KCSKGYQG 271 (324)
T ss_dssp CS-SCCCSSC-CBSC-SSCBCCCTTCCTTTTC------------------------------------------------
T ss_pred CC-CCCCCCC-eeCC-CCeeeCCCCccCCCCCc--------------CcCC-CcCCCCCEECC----CCEE-ECCCCCcC
Confidence 54 4566444 6754 45666666666665531 2343 47888999975 2799 99999999
Q ss_pred CCCCC
Q psy15473 183 EKMSP 187 (190)
Q Consensus 183 ~~C~~ 187 (190)
..|+.
T Consensus 272 ~~C~~ 276 (324)
T 2ygq_A 272 DLCSK 276 (324)
T ss_dssp -----
T ss_pred CCCcC
Confidence 99873
No 20
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.13 E-value=1.8e-11 Score=89.00 Aligned_cols=117 Identities=21% Similarity=0.413 Sum_probs=78.4
Q ss_pred CceeecCCCCCCCCCc---------------------cCCCCcccCCCCCCCCCCcCCCCC-CCCCceecCCcccccCCC
Q psy15473 2 FRRCICQDNTGGDNCE---------------------RCARGYYGNALEGAVTDCKQCPCP-NQGPCVQLDDDQVSNLGN 59 (190)
Q Consensus 2 ~~~C~C~~g~~G~~C~---------------------~C~~g~~g~~c~~~~~~C~~~~C~-~~g~C~~~~~~~~~~~~~ 59 (190)
..+|+|.+||.|..|+ .|++||+|..|+.. .|.. .|. .+++|++
T Consensus 16 ~~~c~C~~g~~G~~C~~~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~C~~~--~C~~-~C~~~~g~C~~----------- 81 (169)
T 2vj2_A 16 RSAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNRA--ICRQ-GCSPKHGSCKL----------- 81 (169)
T ss_dssp -----CCTTEETTTTCEECCCEEETTEEEEECSSCCEEECTTEESTTSCEE--CCCT-TCCTTTEECSS-----------
T ss_pred CeeeeCCCcCcCCCcccccCCCCCcCCCCEeCCCCeeECCCCCcCCCCCCC--CCCC-CCCCCCcccCC-----------
Confidence 4579999999999986 48999999988753 3553 454 4566654
Q ss_pred ceeEeecCCCCCCCCCCccc----------cCCCccCCCCcccCCCCCCCCCCccc-CCCcCCCCCccCC---CCeeeCC
Q psy15473 60 RTRIRIKSALGGNRTRGLAL----------TRQTHYQLTGYHHEPTSGGAFSRCVP-CNCNGHADICDAE---SGRCICQ 125 (190)
Q Consensus 60 ~~~c~c~~~~~g~~c~~~~~----------~~~~~~C~~G~~g~~~~~~~~~~C~~-c~C~~~~~~C~~~---~g~C~C~ 125 (190)
.+.|.|+++|.|..|+.-.. ......|++||+|..|+. .++.|.. .+|.+++ +|... .++|.|+
T Consensus 82 ~~~C~C~~G~~G~~C~~C~~~~~C~~g~C~~~~~C~C~~G~~G~~C~~-~~~~C~~~~~C~~~g-~C~~~~~~~~~C~C~ 159 (169)
T 2vj2_A 82 PGDCRCQYGWQGLYCDKCIPHPGCVHGICNEPWQCLCETNWGGQLCDK-DLNYCGTHQPCLNGG-TCSNTGPDKYQCSCP 159 (169)
T ss_dssp TTCCEECTTEESSSSCEECCCTTCSSEECSSTTCCEECTTEETTTTCE-ESCHHHHTCCCCTTC-EEEECSTTCEEEECC
T ss_pred CCeeECCCCCCCCCcccCCCCCCCCCCCcCCCCEEeCCCCCCCCcccC-CCCCCCCCCCCCCCC-EEcCCCCCCcEeECC
Confidence 15789999999977653111 112235899999998863 2466764 6787555 78652 3689999
Q ss_pred CCCCCCCCc
Q psy15473 126 DNTGGDNCE 134 (190)
Q Consensus 126 ~g~~G~~C~ 134 (190)
++|+|.+|+
T Consensus 160 ~G~~G~~Ce 168 (169)
T 2vj2_A 160 EGYSGPNCE 168 (169)
T ss_dssp TTCCSTTSC
T ss_pred CCCcCcCcC
Confidence 999888875
No 21
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.11 E-value=2.2e-10 Score=80.74 Aligned_cols=108 Identities=19% Similarity=0.377 Sum_probs=61.9
Q ss_pred ceeecCCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCC
Q psy15473 3 RRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQ 82 (190)
Q Consensus 3 ~~C~C~~g~~G~~C~~C~~g~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~ 82 (190)
.+|.|++||+|..|+.-..--.+..-...+++|.+.||.++++|+....... .....+.|.
T Consensus 23 ~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~-~~~~~~~C~------------------ 83 (143)
T 4d90_A 23 FSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRG-DTFIGYVCK------------------ 83 (143)
T ss_dssp CEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEET-TEECCEEEE------------------
T ss_pred EEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCcccc-CCCCCeEeE------------------
Confidence 3577777777777654221111111112457899999999999985432000 000113444
Q ss_pred CccCCCCcccCCCCCCCCCCcccCCCcCCCCCccCCCC--eeeCCCCCCCCCCc
Q psy15473 83 THYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESG--RCICQDNTGGDNCE 134 (190)
Q Consensus 83 ~~~C~~G~~g~~~~~~~~~~C~~c~C~~~~~~C~~~~g--~C~C~~g~~G~~C~ 134 (190)
|++||.|..|+. .++.|...+|..++ .|....+ .|.|+++|+|.+|+
T Consensus 84 ---C~~G~~G~~C~~-~i~~C~~~~C~~~~-~C~~~~g~~~C~C~~G~~G~~c~ 132 (143)
T 4d90_A 84 ---CPRGFNGIHCQH-NINECEVEPCKNGG-ICTDLVANYSCECPGEFMGRNCQ 132 (143)
T ss_dssp ---CCTTEESTTSCE-ECCTTTTCCSCTTC-EEEEETTEEEEECCTTCBSTTSC
T ss_pred ---CcCCCcCCCccc-CCCcCCCCCCCCCC-EeECCCCCeEeECCCCCccCCce
Confidence 566666666652 24678777787544 7765443 67887777777764
No 22
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.10 E-value=6.6e-11 Score=102.41 Aligned_cols=81 Identities=26% Similarity=0.596 Sum_probs=52.8
Q ss_pred CCcccCCCCCCCCCCccc---CCCcC--CCCCccCCCCeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcCC---CCCC
Q psy15473 88 TGYHHEPTSGGAFSRCVP---CNCNG--HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC---PCPN 159 (190)
Q Consensus 88 ~G~~g~~~~~~~~~~C~~---c~C~~--~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~---~C~~ 159 (190)
+||+|..|+. ....|.. ..|.+ ++ .|. .++|.|++||+|..|+ |.. ....|... +|.+
T Consensus 505 ~G~~G~~Ce~-~~~~C~~~~~~~C~~~~~G-~C~--~g~C~C~~G~~G~~Ce-c~~---------~~~~C~~~~g~~Cs~ 570 (687)
T 3k6s_B 505 KLIYGQYCEC-DTINCERYNGQVCGGPGRG-LCF--CGKCRCHPGFEGSACQ-CER---------TTEGCLNPRRVECSG 570 (687)
T ss_dssp CCEESTTSCE-ESSCSCEETTEETSHHHHE-EEE--TTEEEECTTCCSTTSC-SCC---------SSCTTBCTTCSBTSS
T ss_pred CCcccccccc-ccccccCCCCcCcCCCCCC-eEE--CCEEEcCCCCcCCCCc-cCC---------CCCCCCCCCCCCCCC
Confidence 7788877753 1244542 13543 33 554 3577777777777774 332 22346543 7989
Q ss_pred CCCceecCCCCeeeCCCCCCCCCCCCCCC
Q psy15473 160 QGPCVQLDDDQVVCSECPRGYGGEKMSPG 188 (190)
Q Consensus 160 ~g~C~~~~~~~~~C~~C~~G~~G~~C~~c 188 (190)
+|+|.. ++| .|++||.|.+|+.|
T Consensus 571 ~G~C~~-----g~C-~C~~Gy~G~~Ce~c 593 (687)
T 3k6s_B 571 RGRCRC-----NVC-ECHSGYQLPLCQEC 593 (687)
T ss_dssp SCCBCS-----SCB-CCSTTCCTTTTCCC
T ss_pred CCcCCC-----CEE-ECCCCCcCCCCCCC
Confidence 999975 589 99999999999975
No 23
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.07 E-value=5.1e-11 Score=97.35 Aligned_cols=98 Identities=28% Similarity=0.696 Sum_probs=29.1
Q ss_pred ceeecCCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCC
Q psy15473 3 RRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQ 82 (190)
Q Consensus 3 ~~C~C~~g~~G~~C~~C~~g~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~ 82 (190)
++|.|++||+|++||+|.+||++..+... ++.....
T Consensus 313 ~~C~C~~~ttG~~CE~C~pgy~~~P~~~g-------------t~~p~~~------------------------------- 348 (426)
T 3zyj_B 313 LTCECEHNTTGPDCGKCKKNYQGRPWSPG-------------SYLPIPK------------------------------- 348 (426)
T ss_dssp EEECCCTTEESSSSCEECTTCCSSCCCCC-------------BCCSSSS-------------------------------
T ss_pred ceeeCCCCCcCCCccccccccccCcccCC-------------cccccCC-------------------------------
Confidence 47999999999999999999988766421 1100000
Q ss_pred CccCCCCcccCCCCCCCCCCcccCCCcCCCCCccCCCCeee----CCCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCC
Q psy15473 83 THYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158 (190)
Q Consensus 83 ~~~C~~G~~g~~~~~~~~~~C~~c~C~~~~~~C~~~~g~C~----C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~~C~ 158 (190)
+....|++|+|..++..|+..++.|. |+.+. +| +|++||+|.. |+.++|.
T Consensus 349 ---------------g~~~~C~pC~Cn~~g~~CD~~t~~C~ngg~C~~~~---~C-~C~~G~~G~~-------Ce~c~C~ 402 (426)
T 3zyj_B 349 ---------------GAANACIPSISSIGTNVCDNELLHCQNGGTCHNNV---RC-LCPAAYTGIL-------CEKLRCE 402 (426)
T ss_dssp ---------------CBCCCCCCCCC------------------------------------------------------
T ss_pred ---------------CCCCcccCCCCCCCcCccccCcccCCCCCCcCCCC---CC-cCCCCCcCCC-------CcCCCCC
Confidence 01134566666655556666556664 66555 78 7889999876 4567899
Q ss_pred CCCCceecCCCCeee
Q psy15473 159 NQGPCVQLDDDQVVC 173 (190)
Q Consensus 159 ~~g~C~~~~~~~~~C 173 (190)
++|+|++.. +.|
T Consensus 403 ~~g~C~~~~---Gqc 414 (426)
T 3zyj_B 403 EAGSCGSDS---GQG 414 (426)
T ss_dssp ---------------
T ss_pred CCCcccCCC---Ccc
Confidence 999998754 566
No 24
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=99.02 E-value=3.2e-10 Score=91.75 Aligned_cols=102 Identities=25% Similarity=0.622 Sum_probs=75.3
Q ss_pred CCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCCCccCCCCcccCCCCCC---CCCCcccCCCcCCCC
Q psy15473 37 QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGG---AFSRCVPCNCNGHAD 113 (190)
Q Consensus 37 ~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~~~~C~~G~~g~~~~~~---~~~~C~~c~C~~~~~ 113 (190)
.|.|+.|+++...... ....|.|++++.|..| +.|.+||++.++..+ ....|.+|.|+.++.
T Consensus 254 ~C~Cngh~s~c~~~~~------~~~~C~C~~nt~G~~C---------e~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~ 318 (375)
T 4aqt_A 254 RCKCNGHASECVKNEF------DKLMCNCKHNTYGVDC---------EKCLPFFNDRPWRRATAESASECLPCDCNGRSQ 318 (375)
T ss_dssp EECCTTSCSCEEECTT------SCEEECCCTTEESTTS---------CEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCS
T ss_pred eecCCCCCcccCCCCC------CCeeeeCcCCCcCCCc---------ccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCC
Confidence 4778888875433321 1257899999998776 679999999876422 235799999998876
Q ss_pred Cc---------cCCCCee-eCCCCCCCCCCccCCCCcccCCCCCCCCCCcCCC
Q psy15473 114 IC---------DAESGRC-ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156 (190)
Q Consensus 114 ~C---------~~~~g~C-~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~~ 156 (190)
.| +..+|+| .|++||+|.+|++|++||||.... ..|++|.
T Consensus 319 ~C~~d~~~~~c~~~~G~C~~C~~n~~G~~Ce~C~~Gyyg~~~~---~~C~pCa 368 (375)
T 4aqt_A 319 ECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNT---EACSPAA 368 (375)
T ss_dssp CEEECHHHHHHSSCCEEECSCTTTEESTTSCEECSSEECCTTC---SSCEEC-
T ss_pred CcccccccCccCCCCCCCCCCCCCCcCCCCCCCCcCcccCcCC---CCCcCCc
Confidence 54 4557899 599999999999999999997643 4476554
No 25
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.01 E-value=7.4e-10 Score=96.10 Aligned_cols=109 Identities=27% Similarity=0.572 Sum_probs=70.4
Q ss_pred cCC----CCcccCCCCCCCCCCcC---CCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCCCccCCCCc
Q psy15473 18 RCA----RGYYGNALEGAVTDCKQ---CPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGY 90 (190)
Q Consensus 18 ~C~----~g~~g~~c~~~~~~C~~---~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~~~~C~~G~ 90 (190)
.|+ +||+|..|+.+.+.|.. .+|.++|+|.. +.|.|+++|.|..|+ |+
T Consensus 507 ~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~------------g~C~C~~Gy~G~~Ce----------C~--- 561 (690)
T 3fcs_B 507 VCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC------------GDCLCDSDWTGYYCN----------CT--- 561 (690)
T ss_dssp EECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET------------TEEEECTTEESSSSC----------EE---
T ss_pred EeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC------------CeeECcCCCcCCCCc----------cC---
Confidence 466 77888888766667875 47888888864 246665555554442 00
Q ss_pred ccCCCCCCCCCCccc---CCCcCCCCCccCCCCeeeC-CCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCceec
Q psy15473 91 HHEPTSGGAFSRCVP---CNCNGHADICDAESGRCIC-QDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166 (190)
Q Consensus 91 ~g~~~~~~~~~~C~~---c~C~~~~~~C~~~~g~C~C-~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~~C~~~g~C~~~ 166 (190)
. ..+.|.. ..|.+++ .|. .+.|.| .+||.|..|+.|.. | +.+|.++|+|+
T Consensus 562 ------~-~~~~C~~~~g~~C~~~G-~C~--~g~C~C~~~Gy~G~~Ce~C~~-------------C-~~~C~~~g~Cv-- 615 (690)
T 3fcs_B 562 ------T-RTDTCMSSNGLLCSGRG-KCE--CGSCVCIQPGSYGDTCEKCPT-------------C-PDACTFKKECV-- 615 (690)
T ss_dssp ------C-CCTTTBCTTSSBTSSSC-EEE--TTEEECCSTTCBSTTSCBCTT-------------S-CCTTTSCCGGG--
T ss_pred ------C-CCCcccCCCCCCCCCCC-EEe--CCEEECCCCCccCCCcCcCCC-------------C-CCCCCCCCCcc--
Confidence 1 1245553 4577555 774 368888 88888888876521 3 34677777774
Q ss_pred CCCCeeeCCCCCCCCCCCC
Q psy15473 167 DDDQVVCSECPRGYGGEKM 185 (190)
Q Consensus 167 ~~~~~~C~~C~~G~~G~~C 185 (190)
.|+.+|+|..|
T Consensus 616 --------~C~~g~tG~~C 626 (690)
T 3fcs_B 616 --------ECKKFDRGALH 626 (690)
T ss_dssp --------TTTTTCCSSSS
T ss_pred --------cCCCCCccCCC
Confidence 47889999865
No 26
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.96 E-value=4.5e-10 Score=73.21 Aligned_cols=81 Identities=20% Similarity=0.364 Sum_probs=58.0
Q ss_pred ccCCCCcccCCCCCCCCCCcccCCCcCCCCCccCCCCeeeCCCCCCCCCCccCCCCcccCCCC-CCCCCCcCCCCCCCCC
Q psy15473 84 HYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPCPNQGP 162 (190)
Q Consensus 84 ~~C~~G~~g~~~~~~~~~~C~~c~C~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~-~~~~~C~~~~C~~~g~ 162 (190)
..|++||.|..++ ++.|...+|.+. .....|.|+++|+ .| + .++++|.+.||.++|+
T Consensus 4 C~C~~g~~g~~c~---~~~c~~~pC~n~-----~~~y~C~C~~G~~--~C------------~~~~~~~C~~~pC~ngg~ 61 (91)
T 1tpg_A 4 VICRDEKTQMIYQ---QHQSWLRPVLRS-----NRVEYCWCNSGRA--QC------------HSVPVKSCSEPRCFNGGT 61 (91)
T ss_dssp CCCBCSSSCCBCC---SSCEEEEECSSS-----SCEEEEECSSSCC--BC------------CEECEEECSSCCSCTTCE
T ss_pred eECCCCCcCCeEC---CCcccCCccccC-----CCCcEeECCCCCc--cc------------ccCcCCcccCCCCCCCCE
Confidence 4589999998774 366765555532 1234677777765 33 3 2456788889999999
Q ss_pred ceecC-CCCeeeCCCCCCCCCCCCCC
Q psy15473 163 CVQLD-DDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 163 C~~~~-~~~~~C~~C~~G~~G~~C~~ 187 (190)
|+... .+.++| .|++||+|.+|+.
T Consensus 62 C~~~~~~~~~~C-~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 62 CQQALYFSDFVC-QCPEGFAGKSCEI 86 (91)
T ss_dssp EEEESSSSCEEE-ECCTTCBSSSCCB
T ss_pred eecCCCCCCeEe-ECCCCCcCCcCCc
Confidence 99763 245999 9999999999984
No 27
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.92 E-value=6.2e-10 Score=95.46 Aligned_cols=124 Identities=19% Similarity=0.419 Sum_probs=73.1
Q ss_pred CCCCCcCCCCCCCCCceecCCcccccCCCceeE-eecCCCCCCCCCCccccCCCccCCCCccc--CCCCCCCCCCcccCC
Q psy15473 31 AVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI-RIKSALGGNRTRGLALTRQTHYQLTGYHH--EPTSGGAFSRCVPCN 107 (190)
Q Consensus 31 ~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c-~c~~~~~g~~c~~~~~~~~~~~C~~G~~g--~~~~~~~~~~C~~c~ 107 (190)
++++|.+.||+++++|++..... +.| .| ++||+| ..|+ .+++|...+
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gs-------y~C~~C---------------------~~GytGdg~~Ce--DiDEC~~~p 51 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGS-------WSCGFC---------------------PVGFLGNGTHCE--DLDECALVP 51 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSC-------EEECCC---------------------CTTBCSCSSSCC--BCCTTTTSC
T ss_pred cccccCCCCCCCCCEEecCCCCC-------eECCcC---------------------CCccCCCCCCcc--ccccccCCC
Confidence 46789999999999999876431 355 44 455554 3443 346676544
Q ss_pred --CcCCCC--CccCCC--Ceee-CCCCCCCCCCccCC---CCcccCCCCCCCCCCcC--CCCCCCCCceecC---CCCee
Q psy15473 108 --CNGHAD--ICDAES--GRCI-CQDNTGGDNCERCA---RGYYGNALEGAVTDCKQ--CPCPNQGPCVQLD---DDQVV 172 (190)
Q Consensus 108 --C~~~~~--~C~~~~--g~C~-C~~g~~G~~C~~C~---~G~~g~~c~~~~~~C~~--~~C~~~g~C~~~~---~~~~~ 172 (190)
|...+. +|.... .+|. |+++|+|..|+.=. ...-+..| ..+++|.. .+|.++++|+... .+.++
T Consensus 52 ~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C-~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~ 130 (634)
T 1yo8_A 52 DICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVC-EPENPCKDKTHNCHKHAECIYLGHFSDPMYK 130 (634)
T ss_dssp CCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCE-EECCTTTTTCCCCCTTEEEEECCTTCSSSEE
T ss_pred CcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcc-cccccccCCCcccccCcccccccccccccee
Confidence 663321 454322 2554 55555554442000 00011122 24677874 5899999998864 25699
Q ss_pred eCCCCCCCCC--CCCC
Q psy15473 173 CSECPRGYGG--EKMS 186 (190)
Q Consensus 173 C~~C~~G~~G--~~C~ 186 (190)
| .|++||.| .+|+
T Consensus 131 C-~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 131 C-ECQTGYAGDGLICG 145 (634)
T ss_dssp E-EECTTEEESSSSEE
T ss_pred e-eccCCccccCcccc
Confidence 9 99999998 6775
No 28
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.91 E-value=2.6e-10 Score=93.22 Aligned_cols=84 Identities=32% Similarity=0.701 Sum_probs=45.1
Q ss_pred CCcccCCCcCCCCCccCCCC--eeeCCCCCCCCCCccCCCCcccCCCC---------CCCCCCcCCCC------------
Q psy15473 101 SRCVPCNCNGHADICDAESG--RCICQDNTGGDNCERCARGYYGNALE---------GAVTDCKQCPC------------ 157 (190)
Q Consensus 101 ~~C~~c~C~~~~~~C~~~~g--~C~C~~g~~G~~C~~C~~G~~g~~c~---------~~~~~C~~~~C------------ 157 (190)
....+|.|++|+..|+...+ .|.|+++|+|..|++|.+||++.+.. ....+|.+++|
T Consensus 292 ~v~g~C~CnGHas~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~ 371 (426)
T 3zyj_B 292 KVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELL 371 (426)
T ss_dssp ECEEEECCSSSCSCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------------
T ss_pred cccccCcCCCchhhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcc
Confidence 45677899999989987554 89999999999999999999976553 23456776655
Q ss_pred --CCCCCceecCCCCeeeCCCCCCCCCCCCCCCC
Q psy15473 158 --PNQGPCVQLDDDQVVCSECPRGYGGEKMSPGA 189 (190)
Q Consensus 158 --~~~g~C~~~~~~~~~C~~C~~G~~G~~C~~c~ 189 (190)
.++|+|.+. .+| .|++||.|..|++|.
T Consensus 372 ~C~ngg~C~~~----~~C-~C~~G~~G~~Ce~c~ 400 (426)
T 3zyj_B 372 HCQNGGTCHNN----VRC-LCPAAYTGILCEKLR 400 (426)
T ss_dssp ----------------------------------
T ss_pred cCCCCCCcCCC----CCC-cCCCCCcCCCCcCCC
Confidence 445556553 289 899999999998763
No 29
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.91 E-value=4.1e-10 Score=79.45 Aligned_cols=120 Identities=18% Similarity=0.370 Sum_probs=71.9
Q ss_pred CCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCCCccCCCCcccCCCCCCCCCCcccC---CCcCCCCC
Q psy15473 38 CPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC---NCNGHADI 114 (190)
Q Consensus 38 ~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~~~~C~~G~~g~~~~~~~~~~C~~c---~C~~~~~~ 114 (190)
.+|+++++|++. +.|.|+++|.|..- .. ...+..|+ .+++|... +|..++ .
T Consensus 7 ~~C~~~~~C~~~-----------~~C~C~~G~~g~~~-~~-----------~~~~~~C~--dideC~~~~~~~C~~~~-~ 60 (143)
T 2bou_A 7 RWCPQDSSCVNA-----------TACRCNPGFSSFSE-II-----------TTPMETCD--DINECATLSKVSCGKFS-D 60 (143)
T ss_dssp TTCCTTEEESSS-----------SCEEECTTEECSSS-SB-----------CSTTCCCE--ECCGGGC----CCCTTE-E
T ss_pred CcCCCCCEEcCC-----------CEEeCCCCCcCccc-cc-----------cCCCCcCC--ccccccCCCCCCCCCCC-E
Confidence 578899988753 35776666655210 00 00012232 23566543 565333 6
Q ss_pred ccCCC--CeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCc--CCCCCCCCCceecCCCCeeeCCCCCCCCCCCCC
Q psy15473 115 CDAES--GRCICQDNTGGDNCERCARGYYGNALEGAVTDCK--QCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMS 186 (190)
Q Consensus 115 C~~~~--g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~--~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~C~ 186 (190)
|.... ..|.|+++|+|..++.=.....+..|+ ++++|. +.+|.++++|++.. +.|+| .|++||+|....
T Consensus 61 C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~-dideC~~~~~~C~~~~~C~n~~-g~y~C-~C~~Gy~g~~~~ 133 (143)
T 2bou_A 61 CWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQ-DVDECSSGQHQCDSSTVCFNTV-GSYSC-RCRPGWKPRHGI 133 (143)
T ss_dssp EEECSSCEEEEECTTEEETTCCSCBSSGGGCCEE-ECCHHHHTCCCCCTTSEEEECS-SCEEE-ECCSSSCBCTTC
T ss_pred EEcCCCCeEeECCCCcccCcCccccccCCCCCcC-CccCccCcCCCCCCCCEEECCC-CCEEe-eCCCCcccCCCC
Confidence 65433 377787777776553211112233443 567787 37899999999875 67999 999999998864
No 30
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=98.90 E-value=7.1e-10 Score=89.77 Aligned_cols=92 Identities=17% Similarity=0.437 Sum_probs=63.7
Q ss_pred ceeecCCCCCCCCCccCCCCcccCCCCC----CCCCCcCCCCCCCCCceecCCcccccCCCceeE-eecCCCCCCCCCCc
Q psy15473 3 RRCICQDNTGGDNCERCARGYYGNALEG----AVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI-RIKSALGGNRTRGL 77 (190)
Q Consensus 3 ~~C~C~~g~~G~~C~~C~~g~~g~~c~~----~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c-~c~~~~~g~~c~~~ 77 (190)
+.|.|++||+|.+|++|.+||+|..|.. +.+.|.+|.|+.+++-............+...| .|++++.|.+|
T Consensus 272 ~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n~~G~~C--- 348 (375)
T 4aqt_A 272 LMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKC--- 348 (375)
T ss_dssp EEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEEECSCTTTEESTTS---
T ss_pred eeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCCCCCCCCCCcCCCC---
Confidence 4689999999999999999999998763 456899999998876222111100001122567 48888888666
Q ss_pred cccCCCccCCCCcccCCCCCCCCCCcccCC
Q psy15473 78 ALTRQTHYQLTGYHHEPTSGGAFSRCVPCN 107 (190)
Q Consensus 78 ~~~~~~~~C~~G~~g~~~~~~~~~~C~~c~ 107 (190)
+.|++||||.... ..|++|.
T Consensus 349 ------e~C~~Gyyg~~~~----~~C~pCa 368 (375)
T 4aqt_A 349 ------ERCRENFFRLGNT----EACSPAA 368 (375)
T ss_dssp ------CEECSSEECCTTC----SSCEEC-
T ss_pred ------CCCCcCcccCcCC----CCCcCCc
Confidence 6799999997532 4576543
No 31
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.89 E-value=3.4e-11 Score=85.46 Aligned_cols=134 Identities=19% Similarity=0.421 Sum_probs=78.5
Q ss_pred CCCCCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCCCccCCCCcccCCCCCCCCCCcccC-CC
Q psy15473 30 GAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC-NC 108 (190)
Q Consensus 30 ~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~~~~C~~G~~g~~~~~~~~~~C~~c-~C 108 (190)
.++|+|++.||.+ ++|++..++ +.|.|+++|.+..+...........|..+|.+..|+.. ++.|... .|
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~--------y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~-~~~c~~~~~C 71 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGS--------FICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEIN-INGATLKSQC 71 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTE--------EEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEE-EEEEECHHHH
T ss_pred CcCccCcCCCCCC-CEeECCCCC--------EEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccC-CCccccCCcc
Confidence 4678999999986 699988764 68999988887655433332222345555555444310 1112100 00
Q ss_pred cCCCCCccCCCCee-eCCCCCCCCCCccCCCCcc---cCCCCCCCCCCcC--CCCCCCCCceecCCCCeeeCCCCCCCCC
Q psy15473 109 NGHADICDAESGRC-ICQDNTGGDNCERCARGYY---GNALEGAVTDCKQ--CPCPNQGPCVQLDDDQVVCSECPRGYGG 182 (190)
Q Consensus 109 ~~~~~~C~~~~g~C-~C~~g~~G~~C~~C~~G~~---g~~c~~~~~~C~~--~~C~~~g~C~~~~~~~~~C~~C~~G~~G 182 (190)
....... ..+.| .| ...| .|++||. |..|+ ++++|.. .+|.+ ++|++.. ++|+| .|++||+|
T Consensus 72 ~~~~g~~--~g~~C~~c-----~~~C-~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~n~~-g~y~C-~C~~Gy~g 139 (147)
T 2w86_A 72 CSSLGAA--WGSPCTLC-----QVDP-ICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GLCVNTR-GSFKC-QCPSGMTL 139 (147)
T ss_dssp HTTTCSE--ETTTTEEC-----CCCT-TTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SEEEEET-TEEEE-ECCTTCCB
T ss_pred ccCcCcc--cCCCcccC-----CCcc-cCCCccccCCCCccC-ccccccCCCCCCCC-CEEECCC-CCEEe-eCCCCCcc
Confidence 0000000 00011 01 1234 6788884 77775 6788974 45985 6999876 67999 99999998
Q ss_pred CCC
Q psy15473 183 EKM 185 (190)
Q Consensus 183 ~~C 185 (190)
..-
T Consensus 140 ~~~ 142 (147)
T 2w86_A 140 DAT 142 (147)
T ss_dssp CTT
T ss_pred CCC
Confidence 653
No 32
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.83 E-value=3.5e-09 Score=68.95 Aligned_cols=64 Identities=22% Similarity=0.359 Sum_probs=50.8
Q ss_pred CceeecCCCCCCCCCc------------------cCCCCcccCCCC-CCCCCCcCCCCCCCCCceecC--CcccccCCCc
Q psy15473 2 FRRCICQDNTGGDNCE------------------RCARGYYGNALE-GAVTDCKQCPCPNQGPCVQLD--DDQVSNLGNR 60 (190)
Q Consensus 2 ~~~C~C~~g~~G~~C~------------------~C~~g~~g~~c~-~~~~~C~~~~C~~~g~C~~~~--~~~~~~~~~~ 60 (190)
+.+|+|.++|+|..|+ .|++||. .|+ .++++|.+.||+|+|+|++.. ..
T Consensus 1 sy~C~C~~g~~g~~c~~~~c~~~pC~n~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~-------- 70 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQHQSWLRPVLRSNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSD-------- 70 (91)
T ss_dssp CCCCCCBCSSSCCBCCSSCEEEEECSSSSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSC--------
T ss_pred CeeeECCCCCcCCeECCCcccCCccccCCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCC--------
Confidence 3579999999999998 5999997 787 567899999999999999875 32
Q ss_pred eeEeecCCCCCCCCC
Q psy15473 61 TRIRIKSALGGNRTR 75 (190)
Q Consensus 61 ~~c~c~~~~~g~~c~ 75 (190)
+.|.|+++|.|.+|+
T Consensus 71 ~~C~C~~G~~G~~Ce 85 (91)
T 1tpg_A 71 FVCQCPEGFAGKSCE 85 (91)
T ss_dssp EEEECCTTCBSSSCC
T ss_pred eEeECCCCCcCCcCC
Confidence 567776666665553
No 33
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.78 E-value=5.6e-10 Score=80.39 Aligned_cols=122 Identities=21% Similarity=0.497 Sum_probs=75.0
Q ss_pred CCCCCc-CCCCCCCCCceecCCcccccCCCceeEeecCCCC----CCCCCCccccCCCccCCCCcccCCCCCCCCCCccc
Q psy15473 31 AVTDCK-QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALG----GNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP 105 (190)
Q Consensus 31 ~~~~C~-~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~----g~~c~~~~~~~~~~~C~~G~~g~~~~~~~~~~C~~ 105 (190)
++|+|+ +.||. +++|++..++ +.|.|+++|. |..|+... ...|..
T Consensus 2 dideC~~~~~C~-~~~C~n~~gs--------y~C~C~~Gy~~~~~g~~C~d~~---------------------~~~C~~ 51 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGS--------YICDCPPDFELNPTRVGCVDTR---------------------SGNCYL 51 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTE--------EEEECCTTCEECTTSSBEECCC---------------------CEEEEE
T ss_pred ccccCCCCCCCC-CCEeECCCCC--------EEEeCCCCCeECCCCCcccCCC---------------------CCcccC
Confidence 568898 48997 6899998765 5787777775 33332110 011321
Q ss_pred C--CCc-CCCCCccCC------CCeeeCCCCCC-CCCCcc------------CCC--CcccCC---CCCCCCCCcC--CC
Q psy15473 106 C--NCN-GHADICDAE------SGRCICQDNTG-GDNCER------------CAR--GYYGNA---LEGAVTDCKQ--CP 156 (190)
Q Consensus 106 c--~C~-~~~~~C~~~------~g~C~C~~g~~-G~~C~~------------C~~--G~~g~~---c~~~~~~C~~--~~ 156 (190)
. +|. .....|... ...|.|+++|. |..|+. |++ ||.+.. +..++++|+. .+
T Consensus 52 ~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~ 131 (162)
T 1uzk_A 52 DIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGL 131 (162)
T ss_dssp EC----------CEEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGG
T ss_pred CCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCC
Confidence 1 111 012245432 24688888886 666654 444 888863 2246788874 45
Q ss_pred CCCCCCceecCCCCeeeCCCCCCCCCCCC
Q psy15473 157 CPNQGPCVQLDDDQVVCSECPRGYGGEKM 185 (190)
Q Consensus 157 C~~~g~C~~~~~~~~~C~~C~~G~~G~~C 185 (190)
|.+ ++|++.. ++|+| .|++||+|..-
T Consensus 132 C~~-g~C~n~~-gsy~C-~C~~Gy~g~~d 157 (162)
T 1uzk_A 132 CQG-GKCINTF-GSFQC-RCPTGYYLNED 157 (162)
T ss_dssp GBT-SEEEECS-SCEEE-ECCTTCCBCTT
T ss_pred cCC-CEeEcCC-CCEEe-eCCCCccCCCC
Confidence 875 7999876 67999 99999998753
No 34
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.73 E-value=2.7e-09 Score=62.57 Aligned_cols=45 Identities=20% Similarity=0.590 Sum_probs=35.3
Q ss_pred cCCCCCCCCCCcCCCCCCCCCceec----CCCCeeeCCCCCCCCCCCCCC
Q psy15473 142 GNALEGAVTDCKQCPCPNQGPCVQL----DDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 142 g~~c~~~~~~C~~~~C~~~g~C~~~----~~~~~~C~~C~~G~~G~~C~~ 187 (190)
|..|+.++++|.+.||+|+|+|+.. ..+.|+| .|++||+|.+||.
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C-~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLC-KCPNEFTGDRCQN 49 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEE-EECTTEESTTSCE
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeE-eCCCCCcCCCcCc
Confidence 3456667899999999999999532 1245999 9999999999985
No 35
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.65 E-value=4.4e-10 Score=82.76 Aligned_cols=105 Identities=16% Similarity=0.325 Sum_probs=61.8
Q ss_pred CcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCCCccCCCCcccCCCCCCCCCCcc----cCCCcC
Q psy15473 35 CKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV----PCNCNG 110 (190)
Q Consensus 35 C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~~~~C~~G~~g~~~~~~~~~~C~----~c~C~~ 110 (190)
..+.||.++ +|++..+. +.|.|+++|.|.. +..|+ .++.|. +.+|..
T Consensus 8 ~~~~pC~ng-~C~~~~g~--------~~C~C~~G~~g~~------------------~~~C~--~id~C~~~~~~~~C~~ 58 (186)
T 1z1y_A 8 TVDTICXNG-QLVQMSNH--------FXCMCNEGLVHLS------------------ENTCE--EXNECXXETLGXACGE 58 (186)
T ss_dssp CTTCCCBTE-EEEECSSC--------EEEEECTTEEEEE------------------TTEEE--ECCCCSGGGTTSEEET
T ss_pred CCCCCCCCC-EeECCCCC--------eEeECCCCCccCC------------------CCccC--CCCcccCCCCCCCCCC
Confidence 346789865 89887654 4666655554420 00232 235565 344553
Q ss_pred CCCCccCCC-------CeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCcee---cCCCCeeeCCCCCCC
Q psy15473 111 HADICDAES-------GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ---LDDDQVVCSECPRGY 180 (190)
Q Consensus 111 ~~~~C~~~~-------g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~~C~~~g~C~~---~~~~~~~C~~C~~G~ 180 (190)
++ .|.... ..|.|++||+| ..+.-.+++|...+|.++++|+. ...+.++| .|++||
T Consensus 59 ~~-~C~~~~~~~~~g~y~C~C~~G~~g------------~~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C-~C~~Gy 124 (186)
T 1z1y_A 59 FG-QCIENPDPAQVNMYXCGCIEGYTL------------XEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGC-SCAIGX 124 (186)
T ss_dssp TE-EEEECSSTTSSCSEEEEECTTEEE------------ETTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEE-EECTEE
T ss_pred CC-EeecCCCCcCCCCEECCCCCCCcc------------CCCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceE-ECCCCC
Confidence 33 554332 24555555544 43221246688888999999983 22256899 999999
Q ss_pred CC
Q psy15473 181 GG 182 (190)
Q Consensus 181 ~G 182 (190)
+|
T Consensus 125 ~g 126 (186)
T 1z1y_A 125 VP 126 (186)
T ss_dssp EE
T ss_pred cc
Confidence 98
No 36
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.63 E-value=5.1e-09 Score=78.77 Aligned_cols=67 Identities=25% Similarity=0.643 Sum_probs=47.0
Q ss_pred CCCcCCCCCccCCCCeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcCC---CCCCC--CCceecCCCCeeeCCCCCCC
Q psy15473 106 CNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC---PCPNQ--GPCVQLDDDQVVCSECPRGY 180 (190)
Q Consensus 106 c~C~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~---~C~~~--g~C~~~~~~~~~C~~C~~G~ 180 (190)
.+|.+++ .|. .+.|.|.++|.+. ..|+|..|+.+...|... +|.++ |+|.. ++| .|.+||
T Consensus 143 ~~Csg~G-~C~--~g~C~C~~gw~~~------~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~-----g~C-~C~~G~ 207 (217)
T 2p28_B 143 IICSGLG-DCV--CGQCLCHTSDVPG------KLIYGQYCECDTINCERYNGQVCGGPGRGLCFC-----GKC-RCHPGF 207 (217)
T ss_dssp CBGGGTE-EEE--TTEEEECCCCSTT------CCEESTTSCEESSCSCEETTEETTCTTTEEEET-----TEE-EECTTE
T ss_pred CCCCCCC-EEe--CCceECCCCCCCc------ccEECCCcccCCccCCCCCCCCCCCCCCcEEeC-----Cee-ECCCCC
Confidence 3466544 675 4688888886442 346777776444556543 58777 99984 589 899999
Q ss_pred CCCCCCC
Q psy15473 181 GGEKMSP 187 (190)
Q Consensus 181 ~G~~C~~ 187 (190)
+|..|+.
T Consensus 208 ~G~~C~~ 214 (217)
T 2p28_B 208 EGSACQH 214 (217)
T ss_dssp ESTTSCE
T ss_pred ccCCcCC
Confidence 9999985
No 37
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.59 E-value=6.4e-09 Score=70.97 Aligned_cols=50 Identities=24% Similarity=0.593 Sum_probs=37.0
Q ss_pred CCCCCccCCCCcc---cCCCCCCCCCCcC-CCCCCCCCceecCCCCeeeCCCCCCCCCCC
Q psy15473 129 GGDNCERCARGYY---GNALEGAVTDCKQ-CPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184 (190)
Q Consensus 129 ~G~~C~~C~~G~~---g~~c~~~~~~C~~-~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~ 184 (190)
.+..| .|++||. |..| .++++|.. .+| +++|++.. +.|+| .|++||+|..
T Consensus 59 ~~y~C-~C~~Gy~~~~g~~C-~dideC~~~~~C--~~~C~n~~-g~y~C-~C~~G~~g~~ 112 (118)
T 1dx5_I 59 TQASC-ECPEGYILDDGFIC-TDIDECENGGFC--SGVCHNLP-GTFEC-ICGPDSALAG 112 (118)
T ss_dssp STTCE-ECCTTEEEETTTEE-EECCHHHHCSSC--SSEEEECS-SSEEE-EECSSSSCEE
T ss_pred CCeEe-ECCCCccCCCCCcc-ccccccCCCCCC--cCeEEeCC-CCEEE-ECCCCCccCC
Confidence 34556 5777776 5556 36678876 788 68999875 67999 9999998753
No 38
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.54 E-value=7.6e-08 Score=52.32 Aligned_cols=38 Identities=29% Similarity=0.675 Sum_probs=32.9
Q ss_pred CCCCCcCCCCCCCCCceecCCCCeeeCCCCCCCCCCCCCC
Q psy15473 148 AVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 148 ~~~~C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
++++|.+.||.++|+|++.. +.++| .|++||+|.+|+.
T Consensus 2 d~d~C~~~pC~ngg~C~~~~-~~~~C-~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDI-NSYEC-WCPFGFEGKNCEL 39 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEET-TEEEE-ECCTTCCSTTSCC
T ss_pred ccccCCCCCCCCCCEeEcCC-CceEe-ECCCCCcCCccCC
Confidence 35678889999999999875 66999 9999999999974
No 39
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.53 E-value=2.6e-08 Score=74.91 Aligned_cols=98 Identities=21% Similarity=0.431 Sum_probs=56.2
Q ss_pred ceeecCCCCCCCCCccCCCCcccCCCCCCCCCCc----CCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCcc
Q psy15473 3 RRCICQDNTGGDNCERCARGYYGNALEGAVTDCK----QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLA 78 (190)
Q Consensus 3 ~~C~C~~g~~G~~C~~C~~g~~g~~c~~~~~~C~----~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~ 78 (190)
+.|.|.+||+|.+|+ |+.+.+..... ...|. ..+|.++|+|+. ..|.|.++|.+
T Consensus 107 g~C~C~~G~~G~~Ce-c~~~~~~~~~~--~~~C~~~~~~~~Csg~G~C~~------------g~C~C~~gw~~------- 164 (217)
T 2p28_B 107 GICRCDTGYIGKNCE-CQTQGRSSQEL--EGSCRKDNNSIICSGLGDCVC------------GQCLCHTSDVP------- 164 (217)
T ss_dssp TEEEECTTEESTTSC-EECCCCC-GGG--GGGGBSSTTSCBGGGTEEEET------------TEEEECCCCST-------
T ss_pred CEEECCCCccCCccc-ccCcccccccC--CCcCCCCCCCCCCCCCCEEeC------------CceECCCCCCC-------
Confidence 578888888888886 55443221100 01243 467888888873 25777766532
Q ss_pred ccCCCccCCCCcccCCCCCCCCCCcccC---CCcCC--CCCccCCCCeeeCCCCCCCCCCc
Q psy15473 79 LTRQTHYQLTGYHHEPTSGGAFSRCVPC---NCNGH--ADICDAESGRCICQDNTGGDNCE 134 (190)
Q Consensus 79 ~~~~~~~C~~G~~g~~~~~~~~~~C~~c---~C~~~--~~~C~~~~g~C~C~~g~~G~~C~ 134 (190)
...|+|..|+. ....|... .|.++ + +|+ .+.|.|.++|+|..|+
T Consensus 165 --------~~~~~G~~Ce~-~~~~C~~~~g~~C~~~~~G-~C~--~g~C~C~~G~~G~~C~ 213 (217)
T 2p28_B 165 --------GKLIYGQYCEC-DTINCERYNGQVCGGPGRG-LCF--CGKCRCHPGFEGSACQ 213 (217)
T ss_dssp --------TCCEESTTSCE-ESSCSCEETTEETTCTTTE-EEE--TTEEEECTTEESTTSC
T ss_pred --------cccEECCCccc-CCccCCCCCCCCCCCCCCc-EEe--CCeeECCCCCccCCcC
Confidence 12366766652 12345432 46654 3 665 3677777777777764
No 40
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.32 E-value=1.8e-07 Score=54.68 Aligned_cols=49 Identities=18% Similarity=0.305 Sum_probs=32.6
Q ss_pred cCCCCCCCCCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCC
Q psy15473 25 GNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRG 76 (190)
Q Consensus 25 g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~ 76 (190)
|..|+.++++|.+.||+|+|+|....... ..+.+.|.|+++|.|.+|+.
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d---~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLS---NPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC-----CCCEEEEECTTEESTTSCE
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccC---CCCCEeEeCCCCCcCCCcCc
Confidence 45677888999999999999996543210 11236787777777766643
No 41
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.19 E-value=8.1e-07 Score=62.33 Aligned_cols=50 Identities=14% Similarity=0.422 Sum_probs=34.8
Q ss_pred CCccCCCCccc---------CCCCCCCCCCcCC---CCCCCCCceecCCcccccCCCceeEeecCCCCCCCC
Q psy15473 15 NCERCARGYYG---------NALEGAVTDCKQC---PCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRT 74 (190)
Q Consensus 15 ~C~~C~~g~~g---------~~c~~~~~~C~~~---~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c 74 (190)
.| .|++||.| ..|+ ++++|... +|.++++|++..+. +.|.|+++|.|..+
T Consensus 20 ~C-~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~--------y~C~C~~Gy~g~~~ 81 (143)
T 2bou_A 20 AC-RCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGS--------YDCVCSPGYEPVSG 81 (143)
T ss_dssp CE-EECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSC--------EEEEECTTEEETTC
T ss_pred EE-eCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCC--------eEeECCCCcccCcC
Confidence 45 56666666 3453 56789875 89999999987754 57888877776543
No 42
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.18 E-value=9.3e-07 Score=51.33 Aligned_cols=38 Identities=29% Similarity=0.717 Sum_probs=30.6
Q ss_pred CCCCcCC---CCCCCCCcee-cCCCCeeeCCCCCCCCCCCCCC
Q psy15473 149 VTDCKQC---PCPNQGPCVQ-LDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 149 ~~~C~~~---~C~~~g~C~~-~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
+++|.+. ||.++|+|+. ...+.++| .|++||+|.+|+.
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C-~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTC-NCVIGYSGDRCQT 44 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEE-ECCTTCCSSSSCC
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEE-ECCCCCcCCcCCc
Confidence 4567776 9999999983 23356999 9999999999975
No 43
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.18 E-value=2.3e-07 Score=77.35 Aligned_cols=77 Identities=27% Similarity=0.656 Sum_probs=31.6
Q ss_pred ccCCCCcccCCCCCCCCCCcccCCCcCCCCCccCCCCeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCc
Q psy15473 84 HYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 163 (190)
Q Consensus 84 ~~C~~G~~g~~~~~~~~~~C~~c~C~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~~C~~~g~C 163 (190)
..|..+|.|..|+. +.|.. +|. ++ +|.. .+.|.|+++|+|..|+. ..|.+ +|.++|+|
T Consensus 379 ~~C~~~~~g~~c~~---~~C~~-~C~-nG-~C~~-~~~C~C~~G~~G~~C~~--------------~~C~~-~C~~~g~C 436 (463)
T 2wg3_C 379 EECRATVQPAQTLT---SECSR-LCR-NG-YCTP-TGKCCCSPGWEGDFCRT--------------AKCEP-ACRHGGVC 436 (463)
T ss_dssp GGGCCCCCCCCCCC---CHHHH-HCC-SE-EECT-TSCEEECTTEESTTSCE--------------ECC-----------
T ss_pred ccCCCCCcCCCCcc---ccccC-CCC-CC-ccCC-CCeECCCCCcCCCcCCc--------------CcCCC-CCCCCCEE
Confidence 46889999988753 56754 466 34 7764 35777777777776631 34666 89999999
Q ss_pred eecCCCCeeeCCCCCCCCCCCCCC
Q psy15473 164 VQLDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 164 ~~~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
+.. ++| .|++||+|.+|+.
T Consensus 437 ~~~----~~C-~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 437 VRP----NKC-LCKKGYLGPQCEQ 455 (463)
T ss_dssp ------------------------
T ss_pred CCC----CEE-ECCCCcccCCCCC
Confidence 864 689 9999999999985
No 44
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.16 E-value=4.9e-07 Score=77.65 Aligned_cols=52 Identities=23% Similarity=0.522 Sum_probs=39.6
Q ss_pred CCCccCCCCccc--CCCCCCCCCCcCCC--CCCCC---CceecCCcccccCCCceeEe-ecCCCCCCCC
Q psy15473 14 DNCERCARGYYG--NALEGAVTDCKQCP--CPNQG---PCVQLDDDQVSNLGNRTRIR-IKSALGGNRT 74 (190)
Q Consensus 14 ~~C~~C~~g~~g--~~c~~~~~~C~~~~--C~~~g---~C~~~~~~~~~~~~~~~~c~-c~~~~~g~~c 74 (190)
..|..|++||+| ..|+ .+++|...| |.+++ +|++...+ +.|. |+++|.|..+
T Consensus 25 y~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gs--------Y~C~~C~~Gy~G~~c 84 (634)
T 1yo8_A 25 WSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPG--------FHCLPCPPRYRGNQP 84 (634)
T ss_dssp EEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSS--------EEECCCCTTEEECCC
T ss_pred eECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCc--------eecccCCCCcccCcc
Confidence 567788999988 6776 678999888 99998 89987654 5676 7766665443
No 45
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.12 E-value=1.9e-06 Score=48.20 Aligned_cols=36 Identities=25% Similarity=0.550 Sum_probs=28.7
Q ss_pred CCcCC---CCCCCCCcee-cCCCCeeeCCCCCCCCCCCCCC
Q psy15473 151 DCKQC---PCPNQGPCVQ-LDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 151 ~C~~~---~C~~~g~C~~-~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
+|.+. ||.++|+|+. ...+.++| .|++||+|.+|+.
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C-~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTC-NCVIGYSGDRCQT 41 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEE-ECCTTEETTTTCE
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEE-EcCCCCcCCcCCc
Confidence 35565 8999999983 23356999 9999999999974
No 46
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.06 E-value=1.2e-06 Score=49.29 Aligned_cols=37 Identities=32% Similarity=0.649 Sum_probs=29.4
Q ss_pred CCCcC---CCCCCCCCceecC-CCCeeeCCCCCCCCCCCCCCC
Q psy15473 150 TDCKQ---CPCPNQGPCVQLD-DDQVVCSECPRGYGGEKMSPG 188 (190)
Q Consensus 150 ~~C~~---~~C~~~g~C~~~~-~~~~~C~~C~~G~~G~~C~~c 188 (190)
+.|.+ .||.+ |+|.+.. .+.++| .|++||+|.+||.-
T Consensus 4 ~~C~~~~~~pC~n-G~C~~~~~~~~~~C-~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 4 TKCSSDMNGYCLH-GQCIYLVDMSQNYC-RCEVGYTGVRCEHF 44 (46)
T ss_dssp ECCCTTCCSSCSS-EEEEEETTTTEEEE-EECTTCSSTTSCCC
T ss_pred ccCCCCCCCCCCC-CEeeccCCCCCEEE-ECCCCCccCCCCcc
Confidence 45666 79998 8998743 245899 99999999999863
No 47
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.03 E-value=8.5e-07 Score=62.27 Aligned_cols=73 Identities=23% Similarity=0.511 Sum_probs=47.4
Q ss_pred CCCcccCCCcCCCCCccCCCC--eeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcCCCCCCCC---CceecCCCCeeeC
Q psy15473 100 FSRCVPCNCNGHADICDAESG--RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG---PCVQLDDDQVVCS 174 (190)
Q Consensus 100 ~~~C~~c~C~~~~~~C~~~~g--~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~~C~~~g---~C~~~~~~~~~C~ 174 (190)
++.|.+.+|..++ +|....+ .|.|++||+|. .|+..+++|.++++.+++ +|++.....++|
T Consensus 47 id~C~~~pC~n~g-~C~~~~g~y~C~C~~G~~G~------------~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C- 112 (142)
T 2c4f_L 47 GDQCASSPCQNGG-SCKDQLQSYICFCLPAFEGR------------NCETHKDDQLICVNENGGCEQYCSDHTGTKRSC- 112 (142)
T ss_dssp CCGGGGCCCCTTC-EEEEETTEEEEECCTTEEST------------TSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEE-
T ss_pred cCcCcCCCcCCCC-EEeCCCCCEEeeCCCCccCC------------ccccCccccccccCCCCCccCEeECCCCCCEEE-
Confidence 4678877787444 6754332 55655555554 444333445556666655 888776316999
Q ss_pred CCCCCCC----CCCCC
Q psy15473 175 ECPRGYG----GEKMS 186 (190)
Q Consensus 175 ~C~~G~~----G~~C~ 186 (190)
.|++||. |.+|+
T Consensus 113 ~C~~Gy~l~~dG~~C~ 128 (142)
T 2c4f_L 113 RCHEGYSLLADGVSCT 128 (142)
T ss_dssp ECCTTEEECTTSSCEE
T ss_pred ECCCCceECCCCCCCC
Confidence 9999999 88875
No 48
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.01 E-value=5e-06 Score=52.70 Aligned_cols=51 Identities=31% Similarity=0.769 Sum_probs=36.6
Q ss_pred CCCCccCCCCcc--cCCCCCCCCCCc-CCCCCCCCCceecCCCCeeeCCCCCCCCCCCC
Q psy15473 130 GDNCERCARGYY--GNALEGAVTDCK-QCPCPNQGPCVQLDDDQVVCSECPRGYGGEKM 185 (190)
Q Consensus 130 G~~C~~C~~G~~--g~~c~~~~~~C~-~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~C 185 (190)
+..| .|++||. |..| .++++|. +.+|.+ ++|++.. +.|+| .|++||+|..-
T Consensus 25 ~y~C-~C~~Gy~~~g~~C-~dideC~~~~~C~~-~~C~n~~-g~y~C-~C~~G~~g~~~ 78 (82)
T 1emn_A 25 SYRC-ECPFGYILAGNEC-VDTDECSVGNPCGN-GTCKNVI-GGFEC-TCEEGFEPGPM 78 (82)
T ss_dssp CCCE-ECCTTEEEETTEE-EECCGGGTCCTTSS-SCEEECS-SSEEE-CCSSSSCCCSS
T ss_pred CEEE-ECCCCeECCCCcc-CCcccccCCCCCCC-CEeECCC-CCEEe-ECCCCeEeCCC
Confidence 4455 4566664 5555 3567787 678876 6999876 66999 99999998653
No 49
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.97 E-value=1.1e-06 Score=64.90 Aligned_cols=73 Identities=27% Similarity=0.636 Sum_probs=26.0
Q ss_pred CCCCcccCCCcCCCCCccCCCCeeeCCCCCCCCCCccCCCCcccCCCCCCC-CCCcC--CCCCCCCCceecCCCCeeeCC
Q psy15473 99 AFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAV-TDCKQ--CPCPNQGPCVQLDDDQVVCSE 175 (190)
Q Consensus 99 ~~~~C~~c~C~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~-~~C~~--~~C~~~g~C~~~~~~~~~C~~ 175 (190)
.++.|.+.+|...+ +|.... .+..| .|++||.|..|+..+ ++|.. .+|.+ +|++.. +.|+| .
T Consensus 41 dideC~~~pC~ngg-~C~n~~---------g~y~C-~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~-gsy~C-~ 105 (195)
T 1nfu_B 41 DGDQCETSPCQNQG-KCKDGL---------GEYTC-TCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQ-NSVVC-S 105 (195)
T ss_dssp ---------------------------------------------------CCGGGTGGGGCSS--EEEEET-TEEEE-E
T ss_pred CCcccCCCCCCCCC-EeECCC---------CCeeE-eCCCCceeccccccccccccCCCCCCCC--EeECCC-CCeEE-E
Confidence 34778877787444 664432 23445 455666666665545 56765 45764 898876 66999 9
Q ss_pred CCCCCC----CCCCC
Q psy15473 176 CPRGYG----GEKMS 186 (190)
Q Consensus 176 C~~G~~----G~~C~ 186 (190)
|++||. |.+|+
T Consensus 106 C~~Gy~l~~dG~~C~ 120 (195)
T 1nfu_B 106 CARGYTLADNGKACI 120 (195)
T ss_dssp CCTTEEECTTSSCEE
T ss_pred CCCCceeCCCCCccc
Confidence 999999 88885
No 50
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.96 E-value=6.5e-07 Score=51.78 Aligned_cols=32 Identities=28% Similarity=0.612 Sum_probs=25.8
Q ss_pred CCCCCCCCceec---CCCCeeeCCCCCCCCCCCCCC
Q psy15473 155 CPCPNQGPCVQL---DDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 155 ~~C~~~g~C~~~---~~~~~~C~~C~~G~~G~~C~~ 187 (190)
.||.|+|+|++. ..+.++| .|++||+|.+||.
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C-~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSC-ECAIGFMGQRCEY 48 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEE-ECCTTEESTTSCE
T ss_pred CcCCCCCEEecCccCCCCCEEE-ECCCCCcCCCCcc
Confidence 478899999862 1235899 9999999999985
No 51
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.93 E-value=1.3e-06 Score=52.14 Aligned_cols=38 Identities=24% Similarity=0.701 Sum_probs=32.6
Q ss_pred CCCCCcCCCCCCC--CCceecCCCCeeeCCCCCCCC-CCCCCC
Q psy15473 148 AVTDCKQCPCPNQ--GPCVQLDDDQVVCSECPRGYG-GEKMSP 187 (190)
Q Consensus 148 ~~~~C~~~~C~~~--g~C~~~~~~~~~C~~C~~G~~-G~~C~~ 187 (190)
.+++|.+.||.++ |+|++.. +.|+| .|++||+ |.+|+.
T Consensus 10 ~~d~C~snPC~nga~gtC~~~~-g~y~C-~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKETN-SGYIC-RCNQGYRISLDGTG 50 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEECS-SEEEE-ECCTTEEEEECSSS
T ss_pred CCCcCcCCCCcCCCccccccCC-CceEe-ECCCCCccCCCCCC
Confidence 4577989999998 8999876 56999 9999999 999964
No 52
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.91 E-value=1.9e-05 Score=62.38 Aligned_cols=69 Identities=28% Similarity=0.632 Sum_probs=49.4
Q ss_pred CCCcccCCCcCCCCCccCCCCeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcC---CCCCCCCCceecCCCCeeeCCC
Q psy15473 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ---CPCPNQGPCVQLDDDQVVCSEC 176 (190)
Q Consensus 100 ~~~C~~c~C~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~---~~C~~~g~C~~~~~~~~~C~~C 176 (190)
.+.|.+.+|.+.+ +|... ..+..| .|++||.|..|+.++++|.. .+|.+ +|.+.. +.++| .|
T Consensus 5 ~~~C~~~pC~~~g-~C~~~---------~~~~~C-~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~-g~~~C-~C 69 (317)
T 3h5c_B 5 GSPCISQPCLHNG-SCQDS---------IWGYTC-TCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQ-ESYTC-SC 69 (317)
T ss_dssp -CCTTSCCCTTTC-CCCCC---------SSSCCC-CCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCS-SSCEE-EC
T ss_pred CCcCCCCCCCCCC-EeECC---------CCCeEE-ECCCCCcCCccccCcccCCCCCCCCCcC--ccccCC-CeeEE-ec
Confidence 3567777777433 66432 234566 67777777778777888986 68876 898875 66999 99
Q ss_pred CCCCCCC
Q psy15473 177 PRGYGGE 183 (190)
Q Consensus 177 ~~G~~G~ 183 (190)
++||.|.
T Consensus 70 ~~g~~~~ 76 (317)
T 3h5c_B 70 AQGYRLG 76 (317)
T ss_dssp CTTEECC
T ss_pred ccccccc
Confidence 9999874
No 53
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.91 E-value=1.6e-06 Score=60.29 Aligned_cols=72 Identities=28% Similarity=0.650 Sum_probs=25.4
Q ss_pred CCCcccCCCcCCCCCccCCCCeeeCCCCCCCCCCccCCCCcccCCCCCCC-CCCcC--CCCCCCCCceecCCCCeeeCCC
Q psy15473 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAV-TDCKQ--CPCPNQGPCVQLDDDQVVCSEC 176 (190)
Q Consensus 100 ~~~C~~c~C~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~-~~C~~--~~C~~~g~C~~~~~~~~~C~~C 176 (190)
++.|.+.+|.+++ +|... ..+..| .|++||.|..|+..+ +.|.. .+|.+ +|++.. +.++| .|
T Consensus 42 ~d~C~~~pC~n~g-~C~~~---------~~~y~C-~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~-g~y~C-~C 106 (134)
T 2vh0_B 42 GDQCETSPCQNQG-KCKDG---------LGEYTC-TCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQ-NSVVC-SC 106 (134)
T ss_dssp --------------------------------------------------CCGGGTGGGGCSS--EEEEET-TEEEE-EC
T ss_pred cCcCCCCCCCCcC-CcccC---------CCCEEe-eCCCCccCCccccCCCCccccCCCCCCC--EeECCC-CCEEE-EC
Confidence 4677777777433 66443 223444 455566666665444 55765 45754 898875 66999 99
Q ss_pred CCCCC----CCCCC
Q psy15473 177 PRGYG----GEKMS 186 (190)
Q Consensus 177 ~~G~~----G~~C~ 186 (190)
++||+ |.+|+
T Consensus 107 ~~Gy~l~~~g~~C~ 120 (134)
T 2vh0_B 107 ARGYTLADNGKACI 120 (134)
T ss_dssp CTTEEECTTSSCEE
T ss_pred CCCcEECCCCCccC
Confidence 99999 88875
No 54
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.91 E-value=7.4e-06 Score=57.70 Aligned_cols=23 Identities=26% Similarity=0.497 Sum_probs=16.8
Q ss_pred CCCCCCcCCCCCCCCCceecCCc
Q psy15473 30 GAVTDCKQCPCPNQGPCVQLDDD 52 (190)
Q Consensus 30 ~~~~~C~~~~C~~~g~C~~~~~~ 52 (190)
.++++|.+.||.++++|++..++
T Consensus 46 ~dideC~~~pC~n~g~C~~~~~~ 68 (146)
T 1x7a_L 46 VDGDQCEPNPCLNGGLCKDDINS 68 (146)
T ss_dssp ----CCSSCSSCTTCEEEECSSC
T ss_pred CCcCcCCCCCCCCCCEeECCCCC
Confidence 35789999999999999987654
No 55
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.89 E-value=1.5e-05 Score=42.90 Aligned_cols=36 Identities=19% Similarity=0.379 Sum_probs=27.4
Q ss_pred CCCCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCC
Q psy15473 31 AVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRT 74 (190)
Q Consensus 31 ~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c 74 (190)
++++|.+.||+++++|++..+. +.|.|+++|.|.+|
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~--------~~C~C~~G~~G~~C 37 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINS--------YECWCPFGFEGKNC 37 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTE--------EEEECCTTCCSTTS
T ss_pred ccccCCCCCCCCCCEeEcCCCc--------eEeECCCCCcCCcc
Confidence 4578999999999999987643 56777777766554
No 56
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.89 E-value=4.2e-06 Score=58.98 Aligned_cols=70 Identities=29% Similarity=0.672 Sum_probs=44.3
Q ss_pred CCCCcccCCCcCCCCCccCCC--CeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcC--CCCCCCCCc-eecCCCCeee
Q psy15473 99 AFSRCVPCNCNGHADICDAES--GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ--CPCPNQGPC-VQLDDDQVVC 173 (190)
Q Consensus 99 ~~~~C~~c~C~~~~~~C~~~~--g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~--~~C~~~g~C-~~~~~~~~~C 173 (190)
.++.|.+.+|.+++ +|.... ..|.|++||+|..|+ . +++|.. .+|.+ +| ++.. +.++|
T Consensus 47 dideC~~~pC~n~g-~C~~~~~~y~C~C~~G~~G~~C~------------~-~deC~~~~~~C~~--~C~~n~~-g~y~C 109 (146)
T 1x7a_L 47 DGDQCEPNPCLNGG-LCKDDINSYECWCQVGFEGKNCE------------L-DATCNIKNGRCKQ--FCKTGAD-SKVLC 109 (146)
T ss_dssp ---CCSSCSSCTTC-EEEECSSCEEEECCSSEESTTTC------------E-ECCTTSGGGSCSS--BCCCCSS-SCCCC
T ss_pred CcCcCCCCCCCCCC-EeECCCCCEEEecCCCCcCCcCC------------C-CccccCCCCCCcC--CCCCCCC-CCEEe
Confidence 34778877887544 775433 266666666665553 1 245654 35654 88 6655 67999
Q ss_pred CCCCCCCC----CCCCC
Q psy15473 174 SECPRGYG----GEKMS 186 (190)
Q Consensus 174 ~~C~~G~~----G~~C~ 186 (190)
.|++||+ |.+|+
T Consensus 110 -~C~~Gy~l~~dG~~C~ 125 (146)
T 1x7a_L 110 -SCTTGYRLAPDQKSCK 125 (146)
T ss_dssp -BCCTTEEECTTSSSEE
T ss_pred -EcCCCcEeCCCCCcCC
Confidence 9999999 88775
No 57
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.87 E-value=2.9e-06 Score=51.01 Aligned_cols=37 Identities=22% Similarity=0.696 Sum_probs=30.3
Q ss_pred CCCcCCCCCCCCCceec----CCCCeeeCCCCCCCCCCCCCC
Q psy15473 150 TDCKQCPCPNQGPCVQL----DDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 150 ~~C~~~~C~~~g~C~~~----~~~~~~C~~C~~G~~G~~C~~ 187 (190)
++|.+.||.++|+|++. ..+.++| .|++||+|.+|+.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C-~C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLC-KCQPGFTGARCTE 47 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEE-ECCTTEESTTSCE
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEE-ECCCCCcCCccCc
Confidence 45778899999999862 2356999 9999999999973
No 58
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.84 E-value=4.5e-06 Score=58.54 Aligned_cols=35 Identities=23% Similarity=0.414 Sum_probs=25.0
Q ss_pred CCCCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCC
Q psy15473 31 AVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNR 73 (190)
Q Consensus 31 ~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~ 73 (190)
++++|.+.||+++++|++..++ +.|.|+++|.|..
T Consensus 46 did~C~~~pC~n~g~C~~~~g~--------y~C~C~~G~~G~~ 80 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQLQS--------YICFCLPAFEGRN 80 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEETTE--------EEEECCTTEESTT
T ss_pred ccCcCcCCCcCCCCEEeCCCCC--------EEeeCCCCccCCc
Confidence 5678999999999999987654 4565554444433
No 59
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.83 E-value=5.9e-06 Score=55.69 Aligned_cols=33 Identities=21% Similarity=0.420 Sum_probs=20.3
Q ss_pred CCCCCcCCC--------CCCCCCceecCCcccccCCCceeEeecCCCCC
Q psy15473 31 AVTDCKQCP--------CPNQGPCVQLDDDQVSNLGNRTRIRIKSALGG 71 (190)
Q Consensus 31 ~~~~C~~~~--------C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g 71 (190)
++++|...| |.++++|++..+. +.|.|+++|.|
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~--------y~C~C~~G~~G 45 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGS--------FSCDCRSGWEG 45 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSC--------CCEEECTTEES
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCC--------cEeeCCCCCcC
Confidence 345787777 9999999876644 45555544444
No 60
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.74 E-value=6.8e-06 Score=52.51 Aligned_cols=72 Identities=21% Similarity=0.534 Sum_probs=42.8
Q ss_pred CCCcccCC--CcCCCCCccCCC--CeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcCCC--CCCCCCceecCCCCeee
Q psy15473 100 FSRCVPCN--CNGHADICDAES--GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP--CPNQGPCVQLDDDQVVC 173 (190)
Q Consensus 100 ~~~C~~c~--C~~~~~~C~~~~--g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~~~--C~~~g~C~~~~~~~~~C 173 (190)
+++|...+ |. ++ .|.... ..|.|++||++.. +.|..|+ ++++|...+ |. +++|++.. ++|+|
T Consensus 3 ideC~~~~~~C~-~g-~C~n~~g~y~C~C~~Gy~~~~-------~~g~~C~-dideC~~~~~~C~-~~~C~n~~-g~y~C 70 (86)
T 1lmj_A 3 IDECRISPDLCG-RG-QCVNTPGDFECKCDEGYESGF-------MMMKNCM-DIDECQRDPLLCR-GGVCHNTE-GSYRC 70 (86)
T ss_dssp CCTTTTCSSTTT-TS-CEEEETTEEEECCCSSEEECT-------TTSSSEE-ECCHHHHCSSTTT-TSEEEEET-TEEEE
T ss_pred cccccCCCCCCC-CC-EEECCCCCEEeeCCCCcCccC-------CCCCccC-CcccccCCCCcCC-CCEeEcCC-CCEEE
Confidence 35565433 54 33 564432 2555555554210 0144453 567787554 75 58999876 67999
Q ss_pred CCCCCCCCCCC
Q psy15473 174 SECPRGYGGEK 184 (190)
Q Consensus 174 ~~C~~G~~G~~ 184 (190)
.|++||++..
T Consensus 71 -~C~~G~~~~~ 80 (86)
T 1lmj_A 71 -ECPPGHQLSP 80 (86)
T ss_dssp -ESCTTSCCCS
T ss_pred -ECcCCcccCC
Confidence 9999998854
No 61
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.72 E-value=4.8e-06 Score=55.55 Aligned_cols=49 Identities=27% Similarity=0.737 Sum_probs=9.1
Q ss_pred CCCCccCCCCccc---CCCCCCCCCCc-CCCCCCCCCceecCCCCeeeCCCCCCCCCCC
Q psy15473 130 GDNCERCARGYYG---NALEGAVTDCK-QCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184 (190)
Q Consensus 130 G~~C~~C~~G~~g---~~c~~~~~~C~-~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~ 184 (190)
+..| .|++||.| ..|+ ++++|. +.+|. ++|++.. +.|+| .|++||.+..
T Consensus 49 ~y~C-~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~-gsy~C-~C~~Gy~~~~ 101 (107)
T 2w2n_E 49 GYEC-LCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLE-GGYKC-QCEEGFQLDP 101 (107)
T ss_dssp SCEE-ECCTTCEEETTTEEE-C-------------------------------------
T ss_pred CeEE-ECCCCccccCCCccc-cccccCCCCCcC--CeeecCC-CCEEE-ECCCCceECC
Confidence 4455 45566655 4454 677886 36785 7898875 66999 9999998754
No 62
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.65 E-value=2.1e-05 Score=52.98 Aligned_cols=48 Identities=23% Similarity=0.569 Sum_probs=28.6
Q ss_pred CCCCccCCCCcccCCCCCC--CCCCcC--CCCCCCCCceecCCCCeeeCCCCCCCCC
Q psy15473 130 GDNCERCARGYYGNALEGA--VTDCKQ--CPCPNQGPCVQLDDDQVVCSECPRGYGG 182 (190)
Q Consensus 130 G~~C~~C~~G~~g~~c~~~--~~~C~~--~~C~~~g~C~~~~~~~~~C~~C~~G~~G 182 (190)
+..| .|++||.|..|+.. +++|.. ..|.+ +|++.. +.|+| .|++||+|
T Consensus 34 ~y~C-~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~-g~y~C-~C~~G~~~ 85 (114)
T 1aut_L 34 SFSC-DCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEV-GWRRC-SCAPGYKL 85 (114)
T ss_dssp CCCE-EECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECS-SSEEE-ECCTTEEE
T ss_pred CcEe-eCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCC-CCEEe-ECCCCeeE
Confidence 3344 35555555555422 234553 23432 898876 66999 99999994
No 63
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.60 E-value=9.2e-06 Score=59.93 Aligned_cols=23 Identities=30% Similarity=0.660 Sum_probs=0.0
Q ss_pred CCCCCCcCCCCCCCCCceecCCc
Q psy15473 30 GAVTDCKQCPCPNQGPCVQLDDD 52 (190)
Q Consensus 30 ~~~~~C~~~~C~~~g~C~~~~~~ 52 (190)
.++++|.+.||.++++|++..+.
T Consensus 40 ~dideC~~~pC~ngg~C~n~~g~ 62 (195)
T 1nfu_B 40 KDGDQCETSPCQNQGKCKDGLGE 62 (195)
T ss_dssp -----------------------
T ss_pred CCCcccCCCCCCCCCEeECCCCC
Confidence 35679999999999999887654
No 64
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.58 E-value=8.1e-06 Score=68.04 Aligned_cols=76 Identities=22% Similarity=0.589 Sum_probs=30.3
Q ss_pred ccCCCCcccCCCCCCCCCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCCCccccCCCccCCCCcccCCCC
Q psy15473 17 ERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS 96 (190)
Q Consensus 17 ~~C~~g~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~~~~~~~~~~~C~~G~~g~~~~ 96 (190)
..|..+|+|..|+. ++|.. +|.| |+|+.. ..|. |++||+|..|+
T Consensus 379 ~~C~~~~~g~~c~~--~~C~~-~C~n-G~C~~~-----------~~C~---------------------C~~G~~G~~C~ 422 (463)
T 2wg3_C 379 EECRATVQPAQTLT--SECSR-LCRN-GYCTPT-----------GKCC---------------------CSPGWEGDFCR 422 (463)
T ss_dssp GGGCCCCCCCCCCC--CHHHH-HCCS-EEECTT-----------SCEE---------------------ECTTEESTTSC
T ss_pred ccCCCCCcCCCCcc--ccccC-CCCC-CccCCC-----------CeEC---------------------CCCCcCCCcCC
Confidence 37888999888775 35765 6886 677642 1344 55666666664
Q ss_pred CCCCCCcccCCCcCCCCCccCCCCeeeCCCCCCCCCCc
Q psy15473 97 GGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCE 134 (190)
Q Consensus 97 ~~~~~~C~~c~C~~~~~~C~~~~g~C~C~~g~~G~~C~ 134 (190)
. +.|.+ +|.+++ +|... ..|.|+++|+|..|+
T Consensus 423 ~---~~C~~-~C~~~g-~C~~~-~~C~C~~G~~G~~C~ 454 (463)
T 2wg3_C 423 T---AKCEP-ACRHGG-VCVRP-NKCLCKKGYLGPQCE 454 (463)
T ss_dssp E---ECC-------------------------------
T ss_pred c---CcCCC-CCCCCC-EECCC-CEEECCCCcccCCCC
Confidence 2 45665 777544 78643 577777777777664
No 65
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.57 E-value=1.3e-05 Score=46.45 Aligned_cols=33 Identities=30% Similarity=0.611 Sum_probs=26.8
Q ss_pred CCCCCCCCCcee-cCCCCeeeCCCCCCCCCCCCCC
Q psy15473 154 QCPCPNQGPCVQ-LDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 154 ~~~C~~~g~C~~-~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
+.||.++|+|.. ...+.++| .|++||+|.+|+.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C-~C~~GytG~~Ce~ 44 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYAC-NCVVGYIGERCQY 44 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEE-EECTTEESTTSCE
T ss_pred CCCCCCCeEEeeecCCCCEEE-ecCCCCcCCCCCc
Confidence 468999999983 22356899 9999999999985
No 66
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.56 E-value=2.1e-05 Score=50.28 Aligned_cols=50 Identities=28% Similarity=0.709 Sum_probs=35.4
Q ss_pred CCCCccCCCCcc----cCCCCCCCCCCcCCCCCCCCCceecCCCCeeeCCCCCCCCCCCCC
Q psy15473 130 GDNCERCARGYY----GNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMS 186 (190)
Q Consensus 130 G~~C~~C~~G~~----g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~C~ 186 (190)
+..| .|++||. |..|+ ++++|.+.+|. ++|++.. ++|+| .|+ |+.|.+++
T Consensus 24 ~y~C-~C~~G~~~~~~g~~C~-dideC~~~~C~--~~C~n~~-g~y~C-~C~-g~~G~~~~ 77 (87)
T 1z6c_A 24 DFEC-ECPEGYRYNLKSKSCE-DIDECSENMCA--QLCVNYP-GGYTC-YCD-GKKGFKLA 77 (87)
T ss_dssp BCCC-SSSTTCEEETTTTEEE-CCCHHHHSCCS--SEECCCS-SSCCE-ECC-SSSCCBCC
T ss_pred CEEE-ECCCCceECCCCCcCC-CcCeeCCCCCC--CEEEccC-CCEEE-ECC-CCcCCccc
Confidence 4455 4666666 45553 67888888886 7898876 67999 997 77776654
No 67
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.52 E-value=1.3e-05 Score=55.53 Aligned_cols=22 Identities=32% Similarity=0.706 Sum_probs=0.0
Q ss_pred CCCCCcCCCCCCCCCceecCCc
Q psy15473 31 AVTDCKQCPCPNQGPCVQLDDD 52 (190)
Q Consensus 31 ~~~~C~~~~C~~~g~C~~~~~~ 52 (190)
++++|.+.||.++++|++..++
T Consensus 41 d~d~C~~~pC~n~g~C~~~~~~ 62 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKDGLGE 62 (134)
T ss_dssp ----------------------
T ss_pred CcCcCCCCCCCCcCCcccCCCC
Confidence 5678999999999999876543
No 68
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.46 E-value=0.00016 Score=56.95 Aligned_cols=21 Identities=24% Similarity=0.488 Sum_probs=16.3
Q ss_pred CCCCCcCCCCCCCCCceecCC
Q psy15473 31 AVTDCKQCPCPNQGPCVQLDD 51 (190)
Q Consensus 31 ~~~~C~~~~C~~~g~C~~~~~ 51 (190)
+.++|.+.||.++++|.+...
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~ 24 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIW 24 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSS
T ss_pred cCCcCCCCCCCCCCEeECCCC
Confidence 357899999999999987654
No 69
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.38 E-value=9.4e-05 Score=46.65 Aligned_cols=54 Identities=26% Similarity=0.629 Sum_probs=37.8
Q ss_pred cCCCCCCCCCccCCCCcc--cCCCCCCCCCCc-CCCCCCCCCceecCCcccccCCCceeEeecCCCCC
Q psy15473 7 CQDNTGGDNCERCARGYY--GNALEGAVTDCK-QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGG 71 (190)
Q Consensus 7 C~~g~~G~~C~~C~~g~~--g~~c~~~~~~C~-~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g 71 (190)
|.....+..| .|++||. |..| .++++|. ..||.+ ++|++..++ +.|.|+++|.+
T Consensus 19 C~n~~g~y~C-~C~~Gy~~~g~~C-~dideC~~~~~C~~-~~C~n~~g~--------y~C~C~~G~~g 75 (82)
T 1emn_A 19 CINTDGSYRC-ECPFGYILAGNEC-VDTDECSVGNPCGN-GTCKNVIGG--------FECTCEEGFEP 75 (82)
T ss_dssp ECCCSSCCCE-ECCTTEEEETTEE-EECCGGGTCCTTSS-SCEEECSSS--------EEECCSSSSCC
T ss_pred EEecCCCEEE-ECCCCeECCCCcc-CCcccccCCCCCCC-CEeECCCCC--------EEeECCCCeEe
Confidence 3344446677 8999997 7777 4578897 788986 589987754 46666666554
No 70
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.35 E-value=0.00015 Score=46.25 Aligned_cols=21 Identities=29% Similarity=0.771 Sum_probs=15.7
Q ss_pred CCCCCcCCC--CCCCCCceecCCc
Q psy15473 31 AVTDCKQCP--CPNQGPCVQLDDD 52 (190)
Q Consensus 31 ~~~~C~~~~--C~~~g~C~~~~~~ 52 (190)
++++|...| | ++++|++..++
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~ 24 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGD 24 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTB
T ss_pred ccccccCCCCCC-CCCEeECCCCC
Confidence 467888777 8 77889887654
No 71
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.32 E-value=0.00019 Score=41.36 Aligned_cols=36 Identities=22% Similarity=0.421 Sum_probs=24.6
Q ss_pred CCCCcCC---CCCCCCCcee--cCCcccccCCCceeEeecCCCCCCCCC
Q psy15473 32 VTDCKQC---PCPNQGPCVQ--LDDDQVSNLGNRTRIRIKSALGGNRTR 75 (190)
Q Consensus 32 ~~~C~~~---~C~~~g~C~~--~~~~~~~~~~~~~~c~c~~~~~g~~c~ 75 (190)
+++|.+. ||+|+|+|+. ..+. +.|.|+++|.|.+|+
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~--------~~C~C~~G~~G~~Ce 43 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDS--------YTCNCVIGYSGDRCQ 43 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSC--------EEEECCTTCCSSSSC
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCC--------EEEECCCCCcCCcCC
Confidence 4678876 9999999984 3332 567776666665553
No 72
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=97.28 E-value=4.9e-05 Score=44.77 Aligned_cols=31 Identities=29% Similarity=0.642 Sum_probs=25.2
Q ss_pred CCCCCCCceec---CCCCeeeCCCCCCCCCCCCCC
Q psy15473 156 PCPNQGPCVQL---DDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 156 ~C~~~g~C~~~---~~~~~~C~~C~~G~~G~~C~~ 187 (190)
+|.|+|+|+.. ....+.| .|++||+|.+||.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C-~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSC-ECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEE-EECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEe-ECCCCCccCCCcc
Confidence 79999999832 2235899 9999999999985
No 73
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.27 E-value=2.4e-05 Score=55.01 Aligned_cols=44 Identities=30% Similarity=0.683 Sum_probs=32.2
Q ss_pred cCCCCcc---cCCCCCCCCCCcCCC--CCCCCCceecCCcccccCCCceeEeecCCCCC
Q psy15473 18 RCARGYY---GNALEGAVTDCKQCP--CPNQGPCVQLDDDQVSNLGNRTRIRIKSALGG 71 (190)
Q Consensus 18 ~C~~g~~---g~~c~~~~~~C~~~~--C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g 71 (190)
.|++||. |..|+ ++++|+..| |++ ++|++..++ +.|.|+++|.+
T Consensus 91 ~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~n~~g~--------y~C~C~~Gy~g 139 (147)
T 2w86_A 91 ICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GLCVNTRGS--------FKCQCPSGMTL 139 (147)
T ss_dssp TTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SEEEEETTE--------EEEECCTTCCB
T ss_pred cCCCccccCCCCccC-ccccccCCCCCCCC-CEEECCCCC--------EEeeCCCCCcc
Confidence 5889994 78886 788998544 986 589988765 56776666654
No 74
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.24 E-value=4.8e-05 Score=51.50 Aligned_cols=43 Identities=21% Similarity=0.437 Sum_probs=30.0
Q ss_pred cCCCCcc---cCCCCCCCCCCcC-CCCCCCCCceecCCcccccCCCceeEeecCCCCC
Q psy15473 18 RCARGYY---GNALEGAVTDCKQ-CPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGG 71 (190)
Q Consensus 18 ~C~~g~~---g~~c~~~~~~C~~-~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g 71 (190)
.|++||. |..| .++++|.. .|| +++|++..++ +.|.|+++|.+
T Consensus 64 ~C~~Gy~~~~g~~C-~dideC~~~~~C--~~~C~n~~g~--------y~C~C~~G~~g 110 (118)
T 1dx5_I 64 ECPEGYILDDGFIC-TDIDECENGGFC--SGVCHNLPGT--------FECICGPDSAL 110 (118)
T ss_dssp ECCTTEEEETTTEE-EECCHHHHCSSC--SSEEEECSSS--------EEEEECSSSSC
T ss_pred ECCCCccCCCCCcc-ccccccCCCCCC--cCeEEeCCCC--------EEEECCCCCcc
Confidence 4788888 6666 35778876 788 5678877654 56777766654
No 75
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.16 E-value=0.0002 Score=45.49 Aligned_cols=31 Identities=23% Similarity=0.641 Sum_probs=20.8
Q ss_pred CCCCCcCCC--CCCCCCceecCCcccccCCCceeEeecCCCC
Q psy15473 31 AVTDCKQCP--CPNQGPCVQLDDDQVSNLGNRTRIRIKSALG 70 (190)
Q Consensus 31 ~~~~C~~~~--C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~ 70 (190)
++++|...| |.+ ++|++..++ +.|.|+++|.
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~--------y~C~C~~Gy~ 34 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGD--------FECKCDEGYE 34 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTE--------EEECCCSSEE
T ss_pred ccccccCCCCCCCC-CEEECCCCC--------EEeeCCCCcC
Confidence 467888766 965 589988764 4566555543
No 76
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.08 E-value=0.00035 Score=38.74 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=21.2
Q ss_pred CCcCC---CCCCCCCceecCCcccccCCCceeEeecCCCCCCCC
Q psy15473 34 DCKQC---PCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRT 74 (190)
Q Consensus 34 ~C~~~---~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c 74 (190)
+|.+. ||+|+|+|+..... ..+.|.|+++|.|.+|
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~------~~~~C~C~~G~~G~~C 39 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESL------DSYTCNCVIGYSGDRC 39 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTT------SSEEEECCTTEETTTT
T ss_pred CcccCCCCCCCCCCEEEeecCC------CCEEEEcCCCCcCCcC
Confidence 56666 99999999742211 1256666555555444
No 77
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.98 E-value=0.00017 Score=51.34 Aligned_cols=60 Identities=22% Similarity=0.547 Sum_probs=43.5
Q ss_pred ceeecCCCCC-CCCCccC------------CC--CcccCC---CCCCCCCCcC--CCCCCCCCceecCCcccccCCCcee
Q psy15473 3 RRCICQDNTG-GDNCERC------------AR--GYYGNA---LEGAVTDCKQ--CPCPNQGPCVQLDDDQVSNLGNRTR 62 (190)
Q Consensus 3 ~~C~C~~g~~-G~~C~~C------------~~--g~~g~~---c~~~~~~C~~--~~C~~~g~C~~~~~~~~~~~~~~~~ 62 (190)
..|.|++||. |..|+.| ++ ||.+.. +..++|+|+. .+|++ ++|++..++ +.
T Consensus 75 ~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gs--------y~ 145 (162)
T 1uzk_A 75 ASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGS--------FQ 145 (162)
T ss_dssp HHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSC--------EE
T ss_pred ceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCC--------EE
Confidence 4688999998 8888754 44 898863 3357889985 45986 699998765 56
Q ss_pred EeecCCCCC
Q psy15473 63 IRIKSALGG 71 (190)
Q Consensus 63 c~c~~~~~g 71 (190)
|.|+++|.+
T Consensus 146 C~C~~Gy~g 154 (162)
T 1uzk_A 146 CRCPTGYYL 154 (162)
T ss_dssp EECCTTCCB
T ss_pred eeCCCCccC
Confidence 777766655
No 78
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.98 E-value=0.00015 Score=43.06 Aligned_cols=36 Identities=17% Similarity=0.388 Sum_probs=25.8
Q ss_pred CCCCCcCCCCCCC--CCceecCCcccccCCCceeEeecCCCC-CCCC
Q psy15473 31 AVTDCKQCPCPNQ--GPCVQLDDDQVSNLGNRTRIRIKSALG-GNRT 74 (190)
Q Consensus 31 ~~~~C~~~~C~~~--g~C~~~~~~~~~~~~~~~~c~c~~~~~-g~~c 74 (190)
.+++|.+.||+++ ++|++..++ +.|.|+++|. |..|
T Consensus 10 ~~d~C~snPC~nga~gtC~~~~g~--------y~C~C~~Gy~~G~~C 48 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKETNSG--------YICRCNQGYRISLDG 48 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEECSSE--------EEEECCTTEEEEECS
T ss_pred CCCcCcCCCCcCCCccccccCCCc--------eEeECCCCCccCCCC
Confidence 4578999999999 899987654 4666655555 5444
No 79
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.97 E-value=0.0005 Score=38.34 Aligned_cols=37 Identities=27% Similarity=0.519 Sum_probs=24.9
Q ss_pred CCCCcC---CCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCC
Q psy15473 32 VTDCKQ---CPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTR 75 (190)
Q Consensus 32 ~~~C~~---~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~ 75 (190)
+++|.+ .||.| |+|.+..+. +.+.|.|+++|.|.+|+
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~------~~~~C~C~~GytG~~Ce 42 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDM------SQNYCRCEVGYTGVRCE 42 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTT------TEEEEEECTTCSSTTSC
T ss_pred cccCCCCCCCCCCC-CEeeccCCC------CCEEEECCCCCccCCCC
Confidence 456777 89999 799875421 12567777777776654
No 80
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.81 E-value=0.00013 Score=41.88 Aligned_cols=35 Identities=14% Similarity=0.223 Sum_probs=20.3
Q ss_pred CCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCC
Q psy15473 37 QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTR 75 (190)
Q Consensus 37 ~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~ 75 (190)
+.||+|+|+|+....... ..+.|.|+++|.|.+|+
T Consensus 13 ~~pC~NGGtC~~~~~~~~----~~y~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 13 AWYCLNDAHCFAVKIADL----PVYSCECAIGFMGQRCE 47 (52)
T ss_dssp HHTSCTTCEEEEEEETTE----EEEEEECCTTEESTTSC
T ss_pred CCcCCCCCEEecCccCCC----CCEEEECCCCCcCCCCc
Confidence 458999999986421000 12467666666655553
No 81
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.68 E-value=0.00045 Score=41.19 Aligned_cols=39 Identities=21% Similarity=0.365 Sum_probs=23.6
Q ss_pred CCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCC
Q psy15473 33 TDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRT 74 (190)
Q Consensus 33 ~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c 74 (190)
++|.+.||+|+|+|+++.+.. ....+.|.|+++|.|.+|
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~---~~~~y~C~C~~Gf~G~~C 45 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLS---NPSRYLCKCQPGFTGARC 45 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSS---SSCCEEEECCTTEESTTS
T ss_pred CCCCCCcCCCCcEEecCCccC---CCCCEEEECCCCCcCCcc
Confidence 568889999999998742100 001256666655555544
No 82
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.51 E-value=0.0004 Score=56.21 Aligned_cols=50 Identities=26% Similarity=0.694 Sum_probs=17.9
Q ss_pred CCCccCCCCcc----cCCCCCCCCCCc-CCCCCCCCCceecCCCCeeeCCCCCCCC----CCCCC
Q psy15473 131 DNCERCARGYY----GNALEGAVTDCK-QCPCPNQGPCVQLDDDQVVCSECPRGYG----GEKMS 186 (190)
Q Consensus 131 ~~C~~C~~G~~----g~~c~~~~~~C~-~~~C~~~g~C~~~~~~~~~C~~C~~G~~----G~~C~ 186 (190)
..| .|++||. |..| .++++|. +.+|.+. |.+.. ++++| .|++||. |..|+
T Consensus 24 ~~C-~C~~G~~l~~~~~~C-~d~~eC~~~~~C~~~--C~~~~-g~~~C-~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 24 VQC-TCHTGYRLTEDGRTC-QDVNECAEEGYCSQG--CTNSE-GAFQC-WCEAGYELRPDRRSCK 82 (386)
T ss_dssp ------------------------------CCTTE--EC------CCE-ECCTTEEECTTSSCEE
T ss_pred cEe-ECCCCceECCCCCcc-CccceeCCcCcccCc--CCCCC-CCCeE-EECCCceEcCCCCeEC
Confidence 455 5666665 6666 4678886 5678753 88765 66999 9999998 77774
No 83
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.28 E-value=0.00046 Score=45.78 Aligned_cols=50 Identities=22% Similarity=0.538 Sum_probs=13.8
Q ss_pred CCCCCCCCccCCCCccc---CCCCCCCCCCcC-CCCCCCCCceecCCcccccCCCceeEeecCCCC
Q psy15473 9 DNTGGDNCERCARGYYG---NALEGAVTDCKQ-CPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALG 70 (190)
Q Consensus 9 ~g~~G~~C~~C~~g~~g---~~c~~~~~~C~~-~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~ 70 (190)
....+..| .|++||.| ..|+ ++++|.. .+|. ++|++..++ +.|.|+++|.
T Consensus 45 n~~g~y~C-~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~gs--------y~C~C~~Gy~ 98 (107)
T 2w2n_E 45 DLKIGYEC-LCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGG--------YKCQCEEGFQ 98 (107)
T ss_dssp CCSBSCEE-ECCTTCEEETTTEEE-C----------------------------------------
T ss_pred eCCCCeEE-ECCCCccccCCCccc-cccccCCCCCcC--CeeecCCCC--------EEEECCCCce
Confidence 33445556 68888887 5666 6788874 6786 578877654 3555555544
No 84
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=96.27 E-value=0.0027 Score=35.99 Aligned_cols=31 Identities=26% Similarity=0.631 Sum_probs=24.0
Q ss_pred CCCCCCCCcee-cCCCCeeeCCCCCCCCCCCCCC
Q psy15473 155 CPCPNQGPCVQ-LDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 155 ~~C~~~g~C~~-~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
.-|.+ |+|.. ...+...| .|++||+|.+||.
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C-~C~~gy~G~RCe~ 45 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSC-VCDEGYIGARCER 45 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEE-CCCTTEETTTTCE
T ss_pred CcccC-CEEEeEcCCCCeEE-ECCCCcccCCCCe
Confidence 45877 89953 33345899 9999999999985
No 85
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.23 E-value=0.0017 Score=52.85 Aligned_cols=44 Identities=25% Similarity=0.741 Sum_probs=30.6
Q ss_pred cCCCCcc---cCCCCCCCCCCc-CCCCCCCCCceecCCCCeeeCCCCCCCCCC
Q psy15473 135 RCARGYY---GNALEGAVTDCK-QCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183 (190)
Q Consensus 135 ~C~~G~~---g~~c~~~~~~C~-~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~ 183 (190)
.|++||. |..|+ ++++|. +.+|.+ +|.+.. ++|+| .|++||.+.
T Consensus 24 ~C~~G~~~~~~~~C~-dideC~~~~~C~~--~C~n~~-g~~~C-~C~~g~~~~ 71 (400)
T 3p5b_L 24 LCPDGFQLVAQRRCE-DIDECQDPDTCSQ--LCVNLE-GGYKC-QCEEGFQLD 71 (400)
T ss_dssp ECCTTEEECSSSCEE-ECCCCSTTSSCSS--CCBCCS-SSCBC-CCCTTCCCC
T ss_pred ECCCCCCcCCCCccc-CchhhhccCCCCC--ccCCCc-cceee-ecccccccc
Confidence 3444554 44453 567886 467864 898875 67999 999999865
No 86
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.21 E-value=0.08 Score=46.14 Aligned_cols=54 Identities=28% Similarity=0.752 Sum_probs=39.1
Q ss_pred CCCCCCCCCCccCCCCcc---cCCCCCCCCCCc-CCCCCCCCCceecCCCCeeeCCCCCCCCCC
Q psy15473 124 CQDNTGGDNCERCARGYY---GNALEGAVTDCK-QCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183 (190)
Q Consensus 124 C~~g~~G~~C~~C~~G~~---g~~c~~~~~~C~-~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~ 183 (190)
|.....+..| .|++||. |..|+ ++++|. +.+|. .+|++.. ++|+| .|++||.+.
T Consensus 308 C~~~~~~~~C-~C~~G~~~~~~~~C~-dideC~~~~~C~--~~C~n~~-g~y~C-~C~~G~~~~ 365 (699)
T 1n7d_A 308 CNDLKIGYEC-LCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLE-GGYKC-QCEEGFQLD 365 (699)
T ss_dssp CCCCTTCCCC-CCCSSSCCCSSSCCC-CCCCCSSSSSCT--TTCCBCS-SCBCC-CCCSSCBCC
T ss_pred cccCCCCcEE-eCCCCeEcCCCCccc-CccccCCCCccc--cccccCC-CCeee-eeecccccC
Confidence 4444556677 6888887 55665 678887 45675 4888875 67999 999999863
No 87
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.11 E-value=0.0013 Score=46.50 Aligned_cols=36 Identities=25% Similarity=0.704 Sum_probs=30.3
Q ss_pred CCCcCCCCCCCCCceecCCCCeeeCCCCCCCCCCCCCC
Q psy15473 150 TDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 150 ~~C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
..|.+.+|.++|+|.+.. +.+.| .|++||.|.+||.
T Consensus 120 ~~c~~~~C~~~g~C~~~~-~~~~c-~C~~g~~G~~Ce~ 155 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETI-GNYTC-SCYPGFYGPECEY 155 (162)
T ss_dssp CCCCTTGGGGSEEEEECS-SSEEE-EECTTEESTTSCE
T ss_pred CCCcCCCCCCCCEEecCC-CCceE-eCCCCCcCccccc
Confidence 346777898899999876 55999 9999999999973
No 88
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.66 E-value=0.0038 Score=35.76 Aligned_cols=33 Identities=15% Similarity=0.320 Sum_probs=21.1
Q ss_pred CCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCC
Q psy15473 37 QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTR 75 (190)
Q Consensus 37 ~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~ 75 (190)
+.||.|+|+|+..... +.+.|.|+++|.|.+|+
T Consensus 11 ~~pC~nGG~C~~~~~~------~~~~C~C~~GytG~~Ce 43 (53)
T 1nql_B 11 DGYCLHDGVCMYIEAL------DKYACNCVVGYIGERCQ 43 (53)
T ss_dssp CCEECTTCEEEEETTT------TEEEEEECTTEESTTSC
T ss_pred CCCCCCCeEEeeecCC------CCEEEecCCCCcCCCCC
Confidence 5789999999843221 12567776666665553
No 89
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=95.58 E-value=0.0072 Score=34.15 Aligned_cols=31 Identities=29% Similarity=0.637 Sum_probs=23.7
Q ss_pred CCCCCCCCceec-CCCCeeeCCCCCCCCCCCCCC
Q psy15473 155 CPCPNQGPCVQL-DDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 155 ~~C~~~g~C~~~-~~~~~~C~~C~~G~~G~~C~~ 187 (190)
..|.++ +|... ....+.| .|++||+|.+|+.
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C-~C~~gy~G~RCe~ 45 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPAC-VCHSGYVGARCEH 45 (50)
T ss_pred CcccCC-EEeeccCCCCeEE-ECCCCCcccCCCc
Confidence 357775 99753 2245899 9999999999985
No 90
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=95.48 E-value=0.0038 Score=49.55 Aligned_cols=42 Identities=33% Similarity=0.941 Sum_probs=36.2
Q ss_pred ccCCCcCCCCCccCCCC--eeeCCCCCCCCCCccCCCCcccCCC
Q psy15473 104 VPCNCNGHADICDAESG--RCICQDNTGGDNCERCARGYYGNAL 145 (190)
Q Consensus 104 ~~c~C~~~~~~C~~~~g--~C~C~~g~~G~~C~~C~~G~~g~~c 145 (190)
..|.|++|++.|...++ .|.|++++.|..|+.|.++|++.+=
T Consensus 268 G~C~CnGHA~~C~~~~g~~~C~C~HnT~G~~Ce~C~p~y~~~pw 311 (338)
T 3tbd_A 268 GRCKCNLHANLCSMREGSLQCECEHNTTGPDCGKCKKNFRTRSW 311 (338)
T ss_dssp EEECCTTBCSCEEEETTEEEECCCTTEESTTSCEECTTCBSSCC
T ss_pred ccccccCCcCccCCCCCCceecCCCCCCCCCCcccCccccCCCC
Confidence 45789999999987665 6999999999999999999988653
No 91
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=95.34 E-value=0.01 Score=33.48 Aligned_cols=31 Identities=29% Similarity=0.678 Sum_probs=23.6
Q ss_pred CCCCCCCCceec-CCCCeeeCCCCCCCCCCCCCC
Q psy15473 155 CPCPNQGPCVQL-DDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 155 ~~C~~~g~C~~~-~~~~~~C~~C~~G~~G~~C~~ 187 (190)
.-|.+ |+|... ..+...| .|++||+|.+|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C-~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTC-KCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEE-ECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeE-ECCCCcccccccc
Confidence 34776 699743 3345899 9999999999985
No 92
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=95.16 E-value=0.0074 Score=43.74 Aligned_cols=30 Identities=37% Similarity=0.922 Sum_probs=25.5
Q ss_pred CcCCCCCCCCCceecCCCCeeeCCCCCCCCCCCCCC
Q psy15473 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 152 C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
|.+ +|.|+|.|... .+| .|++||.|..|+.
T Consensus 151 C~~-~C~ngG~Cv~P----~~C-~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 151 CPG-GCRNGGFCNER----RIC-ECPDGFHGPHCEG 180 (188)
T ss_dssp CTT-CCCTTCEECTT----SCE-ECCTTCBTTTTCB
T ss_pred cCC-CCCCCCEeCCC----Ccc-cCcCCCCCCCCcC
Confidence 543 79999999874 589 8999999999985
No 93
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.90 E-value=0.023 Score=50.29 Aligned_cols=48 Identities=27% Similarity=0.730 Sum_probs=31.7
Q ss_pred CCCCCccCCCCcc---cCCCCCCCCCCc-CCCCCCCCCceecCCCCeeeCCCCCCCCC
Q psy15473 129 GGDNCERCARGYY---GNALEGAVTDCK-QCPCPNQGPCVQLDDDQVVCSECPRGYGG 182 (190)
Q Consensus 129 ~G~~C~~C~~G~~---g~~c~~~~~~C~-~~~C~~~g~C~~~~~~~~~C~~C~~G~~G 182 (190)
.+..| .|++||. |..|+ ++++|. +.+|. .+|++.. ++|+| .|++||..
T Consensus 331 ~~y~C-~C~~Gy~l~~g~~C~-dideC~~~~~C~--~~C~n~~-gsy~C-~C~~Gy~l 382 (791)
T 3m0c_C 331 IGYEC-LCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLE-GGYKC-QCEEGFQL 382 (791)
T ss_dssp BSEEE-ECCTTCEEETTTEEE-CCCCCSSSSSCT--TTCCBCS-SCBCC-CCCSSEEC
T ss_pred CCccc-CCCCCCccCCCCccc-cCcccCCCCCCC--CeeecCC-CCcee-ecCCCCEe
Confidence 34455 4566663 44443 567786 44564 5888875 67999 99999965
No 94
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=94.51 E-value=0.017 Score=49.10 Aligned_cols=37 Identities=27% Similarity=0.445 Sum_probs=31.2
Q ss_pred CCCCcCCCCCCCCCcee-cCCcccccCCCceeEeec-CCCCCCCCCC
Q psy15473 32 VTDCKQCPCPNQGPCVQ-LDDDQVSNLGNRTRIRIK-SALGGNRTRG 76 (190)
Q Consensus 32 ~~~C~~~~C~~~g~C~~-~~~~~~~~~~~~~~c~c~-~~~~g~~c~~ 76 (190)
+++|.+.||+|+|+|.+ ..+. +.|.|. .+|.|.+|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~--------y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDR--------YQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTE--------EEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCc--------eEeeCCCCCcCCCCCCC
Confidence 46899999999999998 5543 689999 9999988864
No 95
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=94.19 E-value=0.014 Score=36.23 Aligned_cols=32 Identities=25% Similarity=0.520 Sum_probs=23.3
Q ss_pred CCCCCCCCCceec-CCCCeeeCCCCCCCCCCCCCC
Q psy15473 154 QCPCPNQGPCVQL-DDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 154 ~~~C~~~g~C~~~-~~~~~~C~~C~~G~~G~~C~~ 187 (190)
...|.++ +|... ..+.+.| .|++||+|.+|+.
T Consensus 45 ~~yClnG-~C~~i~~~~~~~C-~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 45 KDFCIHG-ECKYVKELRAPSC-ICHPGYHGERCHG 77 (79)
T ss_dssp TTCCSSE-EECCBGGGTBCCE-EECTTEESTTCCE
T ss_pred cCcCCCC-EeeeecCCCCeEE-EcCCCcccccccc
Confidence 3467774 89533 2245789 8999999999984
No 96
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=94.07 E-value=0.036 Score=31.20 Aligned_cols=25 Identities=24% Similarity=0.561 Sum_probs=19.7
Q ss_pred CCCCCCCCceecCCCCeeeCCCCCCCCCC
Q psy15473 155 CPCPNQGPCVQLDDDQVVCSECPRGYGGE 183 (190)
Q Consensus 155 ~~C~~~g~C~~~~~~~~~C~~C~~G~~G~ 183 (190)
.+|. .+|++.. ++|+| .|++||.+.
T Consensus 20 ~~C~--~~C~n~~-Gsy~C-~C~~Gy~~~ 44 (53)
T 1apq_A 20 PQCQ--HLCHNYV-GGYFC-SCRPGYELQ 44 (53)
T ss_dssp CTTS--SEEEEET-TEEEE-ECSTTCEEC
T ss_pred CCCC--CEeECCC-CCeEE-ECCCCCeEC
Confidence 4575 4898876 67999 999999853
No 97
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.91 E-value=0.069 Score=43.21 Aligned_cols=30 Identities=10% Similarity=0.101 Sum_probs=19.1
Q ss_pred CCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCC
Q psy15473 33 TDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALG 70 (190)
Q Consensus 33 ~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~ 70 (190)
|+|...++.....|.+..++ +.|.|+++|.
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~--------y~C~C~~G~~ 30 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIG--------YECLCPDGFQ 30 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSS--------EEEECCTTEE
T ss_pred CcccCCCCCCCCEeECCCCC--------eEEECCCCCC
Confidence 46777776666789887654 4565554443
No 98
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=93.72 E-value=0.047 Score=44.38 Aligned_cols=41 Identities=34% Similarity=0.742 Sum_probs=33.1
Q ss_pred CCCCCCCCcCCCCCCCCCceecCCCCeeeCCCCC-CCCCCCCCC
Q psy15473 145 LEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR-GYGGEKMSP 187 (190)
Q Consensus 145 c~~~~~~C~~~~C~~~g~C~~~~~~~~~C~~C~~-G~~G~~C~~ 187 (190)
|....+.|.+.||.++|+|.... ..+.| .|+. +|.|+.|+.
T Consensus 181 C~~~~~~C~~~pC~n~g~C~~~~-~~~~C-~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 181 CEGPSTTCQEDSCSNQGVCLQQW-DGFSC-DCSMTSFSGPLCND 222 (410)
T ss_dssp CCCCSSCCCTTSSSTTCEEEECS-SSEEE-ECTTTSEESTTSCE
T ss_pred CCCCCCCcccccCCCCCEecCCC-CCceE-eccCCcccCCCCCC
Confidence 43334568889999999999875 55999 8996 999999974
No 99
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=93.62 E-value=0.023 Score=48.10 Aligned_cols=67 Identities=24% Similarity=0.665 Sum_probs=46.0
Q ss_pred CCcCCCCCccCCCCeeeCCCCCC--CCCCccCCCCcccCCCCCCCCCCcCCCCCCCCCceecCCCCeeeCCCCCCCC
Q psy15473 107 NCNGHADICDAESGRCICQDNTG--GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYG 181 (190)
Q Consensus 107 ~C~~~~~~C~~~~g~C~C~~g~~--G~~C~~C~~G~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~ 181 (190)
.|...+ .+..-.|+|.|.+||. +..|+.|++|||...... ..|.+||-+. .....+++.| .|..||.
T Consensus 251 ~C~~dG-~w~~p~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~--~~C~~CP~~S----~s~~~Gs~~C-~C~ng~~ 319 (536)
T 3fl7_A 251 HCAVDG-EWLVPIGQCLCQAGYEKVEDACQACSPGFFKFEASE--SPCLECPEHT----LPSPEGATSC-ECEEGFF 319 (536)
T ss_dssp EECTTS-CBCCCBCCCEECTTEEEETTEEEECCTTEECCSCCS--SCCEECCSSE----ECCCTTCSSC-EECTTCB
T ss_pred EEcCCC-CEecccCcEeccCccccCCceeeecCCCCCcccCCC--CccccCCCCC----CCCCCCccEE-EEecccc
Confidence 355555 4555579999999996 678999999999765432 3477765432 2223466888 8888875
No 100
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=93.62 E-value=0.031 Score=39.32 Aligned_cols=34 Identities=29% Similarity=0.822 Sum_probs=29.1
Q ss_pred CcCCCCCCCCCceecCCCCeeeCCCCCCCCCCCCCC
Q psy15473 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 152 C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
|.+.+|.++|+|.... ..+.| .|.+||.|..||.
T Consensus 122 ~~~~~C~~~g~C~~~~-~~~~c-~C~~g~~g~~C~~ 155 (164)
T 3cfw_A 122 CQPWSCSGHGECVEII-NNYTC-NCDVGYYGPQCQF 155 (164)
T ss_dssp CCTTSSCSSEEEEEET-TEEEE-EECTTCBSSSSCB
T ss_pred CCCCcCCCCCeecccC-CCcee-eeCCCcccccccc
Confidence 5667898899999875 55999 9999999999985
No 101
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.61 E-value=0.034 Score=47.49 Aligned_cols=37 Identities=22% Similarity=0.536 Sum_probs=30.2
Q ss_pred CCCCcCCCCCCCCCceecC-CcccccCCCceeEeec-CCCCCCCCCC
Q psy15473 32 VTDCKQCPCPNQGPCVQLD-DDQVSNLGNRTRIRIK-SALGGNRTRG 76 (190)
Q Consensus 32 ~~~C~~~~C~~~g~C~~~~-~~~~~~~~~~~~c~c~-~~~~g~~c~~ 76 (190)
+++|.+.||+|+|+|++.. +. +.|.|. ++|.|.+|+.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~--------y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQ--------YKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTE--------EEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCC--------eEEecCCCCccCCCCCC
Confidence 3679999999999998532 32 789999 9999988864
No 102
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=93.60 E-value=0.028 Score=32.68 Aligned_cols=31 Identities=19% Similarity=0.287 Sum_probs=20.1
Q ss_pred CCCCCCCceecC--CcccccCCCceeEeecCCCCCCCCC
Q psy15473 39 PCPNQGPCVQLD--DDQVSNLGNRTRIRIKSALGGNRTR 75 (190)
Q Consensus 39 ~C~~~g~C~~~~--~~~~~~~~~~~~c~c~~~~~g~~c~ 75 (190)
||.|+|+|.... .. ..+.|.|+++|.|.+|+
T Consensus 15 pC~NGGtC~~~~~~~~------~~~~C~C~~Gf~G~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADL------PVYSCECAIGFMGQRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTE------EEEEEEECTTEESSSSC
T ss_pred cCCCCCEEeCCccCCC------CCEEeECCCCCccCCCc
Confidence 899999998532 11 12567777776666664
No 103
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=93.33 E-value=0.018 Score=40.24 Aligned_cols=35 Identities=29% Similarity=0.815 Sum_probs=29.3
Q ss_pred CCcCCCCCCCCCceecCCCCeeeCCCCCCCCCCCCCC
Q psy15473 151 DCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 151 ~C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
.|.+.||.++|+|.+.. ..+.| .|.+||.|.+||.
T Consensus 121 ~~~~~pc~~~g~C~~~~-~~~~c-~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 121 ACTNTSCSGHGECVETI-NNYTC-KCDPGFSGLKCEQ 155 (157)
T ss_dssp CCCTTGGGGSEEEEEET-TEEEE-EECTTEESTTSCE
T ss_pred CCCCCCCCCCCEeecCC-CCeeE-ECCCCccCccccc
Confidence 46667888889998875 55899 9999999999984
No 104
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.37 E-value=0.029 Score=45.17 Aligned_cols=49 Identities=20% Similarity=0.516 Sum_probs=13.2
Q ss_pred CCCC-CCCccCCCCcc----cCCCCCCCCCCc-CCCCCCCCCceecCCcccccCCCceeEeecCCCC
Q psy15473 10 NTGG-DNCERCARGYY----GNALEGAVTDCK-QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALG 70 (190)
Q Consensus 10 g~~G-~~C~~C~~g~~----g~~c~~~~~~C~-~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~ 70 (190)
+..| ..| .|++||. |..| .++++|. ..+|.+. |.+..++ +.|.|.++|.
T Consensus 19 ~~~g~~~C-~C~~G~~l~~~~~~C-~d~~eC~~~~~C~~~--C~~~~g~--------~~C~C~~g~~ 73 (386)
T 3v65_B 19 MIRGAVQC-TCHTGYRLTEDGRTC-QDVNECAEEGYCSQG--CTNSEGA--------FQCWCEAGYE 73 (386)
T ss_dssp -----------------------------------CCTTE--EC-------------CCEECCTTEE
T ss_pred CCCCCcEe-ECCCCceECCCCCcc-CccceeCCcCcccCc--CCCCCCC--------CeEEECCCce
Confidence 3444 678 8999998 8888 5678996 5788864 8877654 5788888876
No 105
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=91.69 E-value=0.12 Score=47.95 Aligned_cols=42 Identities=33% Similarity=0.723 Sum_probs=33.6
Q ss_pred CCCCCCCCcCCCCCCCCCceecCCCCeeeCCCC-CCCCCCCCCCC
Q psy15473 145 LEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP-RGYGGEKMSPG 188 (190)
Q Consensus 145 c~~~~~~C~~~~C~~~g~C~~~~~~~~~C~~C~-~G~~G~~C~~c 188 (190)
|....+.|.+.||.++|+|...- ..+.| .|+ +||.|+.|+.-
T Consensus 1013 C~~~~~~C~~~pC~ngG~C~~~~-~~~~C-~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1013 CEGPSTTCQEDSCSNQGVCLQQW-DGFSC-DCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp SSCCCCCCCTTSSSSSCEEEEET-TEEEE-ECTTSSCBSTTSCBC
T ss_pred eecccCceECCcCCCCCEeCCCC-CCCEE-ECCCCCCCCCCccCC
Confidence 43334568889999999999875 44999 899 69999999863
No 106
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=91.59 E-value=0.078 Score=32.11 Aligned_cols=26 Identities=19% Similarity=0.526 Sum_probs=16.6
Q ss_pred CCCCCcC--CCCCCCCCceecCCCCeeeCC
Q psy15473 148 AVTDCKQ--CPCPNQGPCVQLDDDQVVCSE 175 (190)
Q Consensus 148 ~~~~C~~--~~C~~~g~C~~~~~~~~~C~~ 175 (190)
++++|.. .+|.++++|++.. ++|+| .
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~-Gsy~C-~ 29 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHY-GGYLC-L 29 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETT-CCEEE-E
T ss_pred ccccccCCCCCCCCCCEeECCC-CCeEe-c
Confidence 3456653 4576667787765 56788 5
No 107
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=91.14 E-value=0.079 Score=37.08 Aligned_cols=34 Identities=18% Similarity=0.453 Sum_probs=21.3
Q ss_pred CCCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCC
Q psy15473 33 TDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRT 74 (190)
Q Consensus 33 ~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c 74 (190)
++|.+.||.++++|.+.... +.|.|+++|.|..|
T Consensus 120 ~~c~~~~C~~~g~C~~~~~~--------~~c~C~~g~~G~~C 153 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIGN--------YTCSCYPGFYGPEC 153 (162)
T ss_dssp CCCCTTGGGGSEEEEECSSS--------EEEEECTTEESTTS
T ss_pred CCCcCCCCCCCCEEecCCCC--------ceEeCCCCCcCccc
Confidence 35777888888888876543 45555544444333
No 108
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=90.86 E-value=0.14 Score=34.40 Aligned_cols=13 Identities=46% Similarity=1.078 Sum_probs=10.6
Q ss_pred CCCCCCCCceecC
Q psy15473 38 CPCPNQGPCVQLD 50 (190)
Q Consensus 38 ~~C~~~g~C~~~~ 50 (190)
+||+|+|+|++..
T Consensus 1 ~pC~nggtC~~~~ 13 (122)
T 2fd6_A 1 CDCLNGGTCVSNK 13 (122)
T ss_dssp CCCCSSCEEEECT
T ss_pred CCCCCcCCcCCCc
Confidence 4899999998753
No 109
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=89.64 E-value=0.46 Score=41.36 Aligned_cols=50 Identities=20% Similarity=0.493 Sum_probs=36.2
Q ss_pred CCCCCCCccCCCCcc---cCCCCCCCCCCc-CCCCCCCCCceecCCcccccCCCceeEeecCCCCC
Q psy15473 10 NTGGDNCERCARGYY---GNALEGAVTDCK-QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGG 71 (190)
Q Consensus 10 g~~G~~C~~C~~g~~---g~~c~~~~~~C~-~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g 71 (190)
...|..| .|++||. |..|+ ++++|. +.+|. ..|++..++ +.|.|.++|.+
T Consensus 311 ~~~~~~C-~C~~G~~~~~~~~C~-dideC~~~~~C~--~~C~n~~g~--------y~C~C~~G~~~ 364 (699)
T 1n7d_A 311 LKIGYEC-LCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGG--------YKCQCEEGFQL 364 (699)
T ss_dssp CTTCCCC-CCCSSSCCCSSSCCC-CCCCCSSSSSCT--TTCCBCSSC--------BCCCCCSSCBC
T ss_pred CCCCcEE-eCCCCeEcCCCCccc-CccccCCCCccc--cccccCCCC--------eeeeeeccccc
Confidence 3345556 7999998 66776 678997 56786 368887665 57888888875
No 110
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=88.45 E-value=0.14 Score=43.22 Aligned_cols=38 Identities=26% Similarity=0.816 Sum_probs=28.5
Q ss_pred CceeecCCCCC--CCCCccCCCCcccCCCCCCCCCCcCCCCC
Q psy15473 2 FRRCICQDNTG--GDNCERCARGYYGNALEGAVTDCKQCPCP 41 (190)
Q Consensus 2 ~~~C~C~~g~~--G~~C~~C~~g~~g~~c~~~~~~C~~~~C~ 41 (190)
.|+|.|..||. |..|+.|++|||...... ..|++||-+
T Consensus 262 ~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~--~~C~~CP~~ 301 (536)
T 3fl7_A 262 IGQCLCQAGYEKVEDACQACSPGFFKFEASE--SPCLECPEH 301 (536)
T ss_dssp BCCCEECTTEEEETTEEEECCTTEECCSCCS--SCCEECCSS
T ss_pred cCcEeccCccccCCceeeecCCCCCcccCCC--CccccCCCC
Confidence 58999999997 677999999999664322 357765544
No 111
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=88.16 E-value=0.35 Score=32.45 Aligned_cols=15 Identities=7% Similarity=-0.110 Sum_probs=9.2
Q ss_pred eeeCCCCCCCCCCCCC
Q psy15473 171 VVCSECPRGYGGEKMS 186 (190)
Q Consensus 171 ~~C~~C~~G~~G~~C~ 186 (190)
|++ .+..++.|..|+
T Consensus 48 YrG-~~~~t~sG~~Cq 62 (122)
T 2fd6_A 48 YRG-KASTDTMGRPCL 62 (122)
T ss_dssp CCS-CCCBBTTSCBBC
T ss_pred cee-eccccccCCccc
Confidence 566 566666666664
No 112
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=87.04 E-value=0.52 Score=38.12 Aligned_cols=42 Identities=29% Similarity=0.484 Sum_probs=32.5
Q ss_pred CCCCCCCCCcCCCCCCCCCceecCCcccccCCCceeEeecC-CCCCCCCCC
Q psy15473 27 ALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKS-ALGGNRTRG 76 (190)
Q Consensus 27 ~c~~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~-~~~g~~c~~ 76 (190)
.|....+.|.+.||.++++|...... +.|.|+. +|.|..|+.
T Consensus 180 gC~~~~~~C~~~pC~n~g~C~~~~~~--------~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 180 GCEGPSTTCQEDSCSNQGVCLQQWDG--------FSCDCSMTSFSGPLCND 222 (410)
T ss_dssp SCCCCSSCCCTTSSSTTCEEEECSSS--------EEEECTTTSEESTTSCE
T ss_pred CCCCCCCCcccccCCCCCEecCCCCC--------ceEeccCCcccCCCCCC
Confidence 45444568999999999999876433 6899985 898888863
No 113
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=86.49 E-value=0.35 Score=44.99 Aligned_cols=36 Identities=33% Similarity=0.765 Sum_probs=31.2
Q ss_pred CCCcCCCCCCCCCceecCCCCeeeCCCC-CCCCCCCCCC
Q psy15473 150 TDCKQCPCPNQGPCVQLDDDQVVCSECP-RGYGGEKMSP 187 (190)
Q Consensus 150 ~~C~~~~C~~~g~C~~~~~~~~~C~~C~-~G~~G~~C~~ 187 (190)
+.|.+.||.++|+|.+.. ..+.| .|+ +||.|..|+.
T Consensus 620 ~~C~~~pC~ngg~C~~~~-~~~~C-~C~~~g~~G~~C~~ 656 (1245)
T 3qcw_A 620 KPCLSNPCKNNGMCRDGW-NRYVC-DCSGTGYLGRSCER 656 (1245)
T ss_dssp CGGGSCCCCTTCEEEECS-SSEEE-ECTTTTEESTTSCE
T ss_pred CCCCccCCCCCCEEeCCC-CCeEE-ECCCCCcccccCcc
Confidence 558889999999999865 55999 899 7999999975
No 114
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=85.95 E-value=0.32 Score=27.22 Aligned_cols=18 Identities=33% Similarity=0.698 Sum_probs=11.1
Q ss_pred CCCCCccCCCCcccCCCCC
Q psy15473 12 GGDNCERCARGYYGNALEG 30 (190)
Q Consensus 12 ~G~~C~~C~~g~~g~~c~~ 30 (190)
..+.| +|++||+|.+|+.
T Consensus 28 ~~~~C-~C~~gy~G~RCe~ 45 (50)
T 3e50_C 28 DKPAC-VCHSGYVGARCEH 45 (50)
T ss_pred CCeEE-ECCCCCcccCCCc
Confidence 34555 6777777776653
No 115
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=85.58 E-value=0.51 Score=34.12 Aligned_cols=31 Identities=29% Similarity=0.792 Sum_probs=21.7
Q ss_pred CcccCCCcCCCCCccCCCCeeeCCCCCCCCCCcc
Q psy15473 102 RCVPCNCNGHADICDAESGRCICQDNTGGDNCER 135 (190)
Q Consensus 102 ~C~~c~C~~~~~~C~~~~g~C~C~~g~~G~~C~~ 135 (190)
.|. ..|.+++ .|.. .++|.|++||+|..|+.
T Consensus 150 ~C~-~~C~ngG-~Cv~-P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 150 ECP-GGCRNGG-FCNE-RRICECPDGFHGPHCEG 180 (188)
T ss_dssp CCT-TCCCTTC-EECT-TSCEECCTTCBTTTTCB
T ss_pred ccC-CCCCCCC-EeCC-CCcccCcCCCCCCCCcC
Confidence 454 3577544 7864 67899999998888863
No 116
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=84.86 E-value=0.44 Score=26.63 Aligned_cols=13 Identities=38% Similarity=0.989 Sum_probs=6.6
Q ss_pred eecCCCCCCCCCc
Q psy15473 5 CICQDNTGGDNCE 17 (190)
Q Consensus 5 C~C~~g~~G~~C~ 17 (190)
|+|..+|+|.+||
T Consensus 36 C~C~~gy~G~RCe 48 (50)
T 2rnl_A 36 CKCQQEYFGERCG 48 (50)
T ss_dssp EECCSSCCSSSCC
T ss_pred EECCCCccccccc
Confidence 5555555555543
No 117
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=82.12 E-value=0.92 Score=31.36 Aligned_cols=34 Identities=26% Similarity=0.545 Sum_probs=21.4
Q ss_pred CCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCCC
Q psy15473 37 QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTR 75 (190)
Q Consensus 37 ~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c~ 75 (190)
.+||+|+|+|+.... ......|.|+++|.|.+|+
T Consensus 12 ~cpC~NGGtC~~~~~-----~s~~~~C~Cp~g~~G~~Ce 45 (145)
T 2i9a_A 12 NCDCLNGGTCVSNKY-----FSNIHWCNCPKKFGGQHCE 45 (145)
T ss_dssp CCCCCTTCEEEECSS-----STTCEEEECCTTEESTTSC
T ss_pred CCCCCCCCCcCCCcc-----ccCCccccCCCCCCCCcee
Confidence 459999999976421 1111367777777766664
No 118
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=82.01 E-value=0.2 Score=35.42 Aligned_cols=45 Identities=22% Similarity=0.548 Sum_probs=28.4
Q ss_pred CCcccCCCCCCCCCCcCCC-----CCCCCCceecCCCCeeeCCCCCCCC----CCCCC
Q psy15473 138 RGYYGNALEGAVTDCKQCP-----CPNQGPCVQLDDDQVVCSECPRGYG----GEKMS 186 (190)
Q Consensus 138 ~G~~g~~c~~~~~~C~~~~-----C~~~g~C~~~~~~~~~C~~C~~G~~----G~~C~ 186 (190)
.||.+.....++++|...+ |.+ .|.+.. +.++| .|++||. |..|+
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~-g~~~C-~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHL-GGFYC-SCRAGYVLHRNKRTCS 166 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEET-TEEEE-ECCTTEEECTTSSCEE
T ss_pred cCceeeeeccccCcccCCCCCCCccCC--ccccCC-CCEEE-eCCCCcEECCCCCccc
Confidence 4555443333456676433 654 688765 66999 9999998 55553
No 119
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=81.50 E-value=0.43 Score=32.89 Aligned_cols=33 Identities=18% Similarity=0.560 Sum_probs=20.0
Q ss_pred CCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCC
Q psy15473 34 DCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRT 74 (190)
Q Consensus 34 ~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c 74 (190)
.|.+.||.+++.|.+.... +.|.|..+|.|.+|
T Consensus 121 ~~~~~pc~~~g~C~~~~~~--------~~c~C~~g~~g~~C 153 (157)
T 1g1t_A 121 ACTNTSCSGHGECVETINN--------YTCKCDPGFSGLKC 153 (157)
T ss_dssp CCCTTGGGGSEEEEEETTE--------EEEEECTTEESTTS
T ss_pred CCCCCCCCCCCEeecCCCC--------eeEECCCCccCccc
Confidence 4666777777778765432 45655555555444
No 120
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=80.59 E-value=0.43 Score=36.84 Aligned_cols=58 Identities=26% Similarity=0.562 Sum_probs=32.6
Q ss_pred CeeeCCCCCCCCCCccCCCCcccCCCCCCCCCCcC----CCCCCCCCceecCCCCeeeCCCCCCC------CCCCCC
Q psy15473 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ----CPCPNQGPCVQLDDDQVVCSECPRGY------GGEKMS 186 (190)
Q Consensus 120 g~C~C~~g~~G~~C~~C~~G~~g~~c~~~~~~C~~----~~C~~~g~C~~~~~~~~~C~~C~~G~------~G~~C~ 186 (190)
|.|.|.++|.|..| .|...-.... .....|.. -.|..+|+|+- ++| .|.+.+ .|..|+
T Consensus 207 G~C~C~~g~~G~~C-eC~~~~~~~~--~~~~~C~~~~~~~~CSgrG~C~C-----G~C-~C~~~~~~~~~~~G~~~~ 274 (280)
T 2p26_A 207 GICRCDTGYIGKNC-ECQTQGRSSQ--ELEGSCRKDNNSIICSGLGDCVC-----GQC-LCHTSDVPGKLIYGQYCE 274 (280)
T ss_dssp TEEEECTTEESTTS-CEECTTSCHH--HHHHTTCSSTTSCGGGGSEEEET-----TEE-EECCCSSTTCEEESTTSC
T ss_pred CceeCCCCCcCCcc-eecCCccccc--cccccCCCCCCCCccCCCceEeC-----Cee-ECcCCCCCCeeEeeEecc
Confidence 57778888888888 4543211000 00002432 13777788875 577 786664 666665
No 121
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=80.33 E-value=0.69 Score=28.52 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=18.1
Q ss_pred CCCc---CCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCC
Q psy15473 33 TDCK---QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRT 74 (190)
Q Consensus 33 ~~C~---~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c 74 (190)
++|. ...|.|+ +|..+.+. ....|.|.++|.|.+|
T Consensus 38 ~pC~~~~~~yClnG-~C~~i~~~------~~~~C~C~~GYtG~RC 75 (79)
T 1xdt_R 38 DPCLRKYKDFCIHG-ECKYVKEL------RAPSCICHPGYHGERC 75 (79)
T ss_dssp -CTTTTTTTCCSSE-EECCBGGG------TBCCEEECTTEESTTC
T ss_pred CCCCccccCcCCCC-EeeeecCC------CCeEEEcCCCcccccc
Confidence 3565 5678875 78544321 1134665555555444
No 122
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=80.13 E-value=1.5 Score=30.42 Aligned_cols=33 Identities=18% Similarity=0.516 Sum_probs=21.3
Q ss_pred CCcCCCCCCCCCceecCCcccccCCCceeEeecCCCCCCCC
Q psy15473 34 DCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRT 74 (190)
Q Consensus 34 ~C~~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g~~c 74 (190)
.|.+.+|.++++|...... +.|.|.++|.|..|
T Consensus 121 ~~~~~~C~~~g~C~~~~~~--------~~c~C~~g~~g~~C 153 (164)
T 3cfw_A 121 SCQPWSCSGHGECVEIINN--------YTCNCDVGYYGPQC 153 (164)
T ss_dssp CCCTTSSCSSEEEEEETTE--------EEEEECTTCBSSSS
T ss_pred CCCCCcCCCCCeecccCCC--------ceeeeCCCcccccc
Confidence 4666778888888876543 46666655555444
No 123
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=79.43 E-value=0.2 Score=43.63 Aligned_cols=45 Identities=22% Similarity=0.440 Sum_probs=34.1
Q ss_pred cCCCCcccCCCCCCCCCCcCCCCCCCCCceecCCCCeeeCCCCCCCCCCCCCC
Q psy15473 135 RCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSP 187 (190)
Q Consensus 135 ~C~~G~~g~~c~~~~~~C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~~C~~ 187 (190)
.|.+||.|..|... ..|. ..|..+|.|.. ++| .|.+||.|..|+.
T Consensus 521 ~C~~gw~g~dc~i~-~~Cp-~~C~ghG~C~~-----G~C-~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 521 DKQQTWAIDNVYIG-DGCL-DMCSGHGRCVQ-----GSC-VCDEQWGGLYCDE 565 (725)
T ss_dssp CTTCCEEEEEEEEE-SCSS-GGGGGSEEEET-----TEE-EECTTEESTTSCE
T ss_pred ccCCCccccccccc-CCCC-cccCCCcEECC-----CCE-eeCCCccCCCcCc
Confidence 58889998887610 2243 26888999987 589 8999999999973
No 124
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=78.17 E-value=0.27 Score=42.84 Aligned_cols=44 Identities=27% Similarity=0.710 Sum_probs=34.5
Q ss_pred cCCCCcccCCCCCCCCCCcccCCCcCCCCCccCCCCeeeCCCCCCCCCCc
Q psy15473 85 YQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCE 134 (190)
Q Consensus 85 ~C~~G~~g~~~~~~~~~~C~~c~C~~~~~~C~~~~g~C~C~~g~~G~~C~ 134 (190)
.|.+||.|..|... ..|. ..|.+|+ .|. .|+|+|.++|.|..|+
T Consensus 521 ~C~~gw~g~dc~i~--~~Cp-~~C~ghG-~C~--~G~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAIDNVYIG--DGCL-DMCSGHG-RCV--QGSCVCDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEEEEEEEE--SCSS-GGGGGSE-EEE--TTEEEECTTEESTTSC
T ss_pred ccCCCccccccccc--CCCC-cccCCCc-EEC--CCCEeeCCCccCCCcC
Confidence 58999999887521 3454 3688887 885 4899999999999997
No 125
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=75.85 E-value=0.58 Score=36.14 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=24.3
Q ss_pred CCCCCc--CCCCCCCCCceecCCcccccCCCceeEeecCCCCC
Q psy15473 31 AVTDCK--QCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGG 71 (190)
Q Consensus 31 ~~~~C~--~~~C~~~g~C~~~~~~~~~~~~~~~~c~c~~~~~g 71 (190)
++|+|. ..+|+.++.|++..++ +.|.|+++|.|
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gs--------y~C~C~~Gy~G 38 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATG--------FCCRCVANYTG 38 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSC--------EEEEECTTEEE
T ss_pred cchhccCCCCCCCCCCEeEcCCCC--------eEEEcCCCCCC
Confidence 467887 5789999999998876 57888877763
No 126
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=73.22 E-value=3 Score=29.56 Aligned_cols=26 Identities=23% Similarity=0.765 Sum_probs=16.0
Q ss_pred CCCCCccCCCCcccCCCCCCCCCCcCC
Q psy15473 129 GGDNCERCARGYYGNALEGAVTDCKQC 155 (190)
Q Consensus 129 ~G~~C~~C~~G~~g~~c~~~~~~C~~~ 155 (190)
....|..|++|+|..... ....|++.
T Consensus 117 ~dt~C~~C~~Gtfs~~~s-s~~~C~p~ 142 (171)
T 3urf_Z 117 RNTVCKRCPDGFFSNETS-SKAPCRKH 142 (171)
T ss_dssp SCCEEEECCTTEECSSCB-SSCCCEEC
T ss_pred CCcccccCCCCcccCCCC-CCCccccC
Confidence 456787899998876531 22346554
No 127
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=72.92 E-value=2.9 Score=27.10 Aligned_cols=23 Identities=26% Similarity=0.728 Sum_probs=17.8
Q ss_pred CCCCCCceecCCCCeeeCCCCCCC
Q psy15473 157 CPNQGPCVQLDDDQVVCSECPRGY 180 (190)
Q Consensus 157 C~~~g~C~~~~~~~~~C~~C~~G~ 180 (190)
|...+.|....+....| .|+++|
T Consensus 61 Cd~nAeC~~~~~~ki~C-~C~~~~ 83 (105)
T 1n1i_A 61 CAPEAECTMDDKKEVEC-KCTKEG 83 (105)
T ss_dssp SCTTSEEEECTTSCEEE-ECCSTT
T ss_pred cCCCcEeEECCCCEEEe-ECCCCC
Confidence 66678888775456899 998884
No 128
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=71.68 E-value=1.5 Score=37.09 Aligned_cols=34 Identities=26% Similarity=0.624 Sum_probs=24.5
Q ss_pred CCCcccCCCcCCCCCccC-CC--CeeeCC-CCCCCCCCc
Q psy15473 100 FSRCVPCNCNGHADICDA-ES--GRCICQ-DNTGGDNCE 134 (190)
Q Consensus 100 ~~~C~~c~C~~~~~~C~~-~~--g~C~C~-~g~~G~~C~ 134 (190)
.+.|.+.+|.+ +.+|.. .. ..|.|. +||+|..|+
T Consensus 2 ~d~C~~~PC~n-gG~C~~~~~~~y~C~C~~~G~~G~~Ce 39 (553)
T 1q4g_A 2 VNPCCYYPCQH-QGICVRFGLDRYQCDCTRTGYSGPNCT 39 (553)
T ss_dssp CCGGGGCCCCT-TCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred CCcCCCCCCCC-CCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence 36788888984 448865 22 378888 888888886
No 129
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=71.64 E-value=1.5 Score=24.71 Aligned_cols=18 Identities=44% Similarity=1.040 Sum_probs=14.4
Q ss_pred CceecCCCCeeeCCCCCCCC
Q psy15473 162 PCVQLDDDQVVCSECPRGYG 181 (190)
Q Consensus 162 ~C~~~~~~~~~C~~C~~G~~ 181 (190)
.|++.. ++++| .|++||.
T Consensus 14 ~C~nt~-Gsy~C-~C~~Gy~ 31 (55)
T 2jkh_L 14 FCHEEQ-NSVVC-SCARGYT 31 (55)
T ss_dssp EEEEET-TEEEE-ECCTTEE
T ss_pred EeEcCC-CCeEE-eCCCCCE
Confidence 677765 67899 8999986
No 130
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=70.93 E-value=1.6 Score=33.64 Aligned_cols=14 Identities=36% Similarity=0.821 Sum_probs=7.7
Q ss_pred ceeecCCCCCCCCC
Q psy15473 3 RRCICQDNTGGDNC 16 (190)
Q Consensus 3 ~~C~C~~g~~G~~C 16 (190)
|.|.|.+||+|.+|
T Consensus 207 G~C~C~~g~~G~~C 220 (280)
T 2p26_A 207 GICRCDTGYIGKNC 220 (280)
T ss_dssp TEEEECTTEESTTS
T ss_pred CceeCCCCCcCCcc
Confidence 34555555555555
No 131
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=70.27 E-value=3.6 Score=28.33 Aligned_cols=28 Identities=36% Similarity=0.938 Sum_probs=15.5
Q ss_pred CCCcCCCCCccCC---C-C-eeeCCCCCCCCCCc
Q psy15473 106 CNCNGHADICDAE---S-G-RCICQDNTGGDNCE 134 (190)
Q Consensus 106 c~C~~~~~~C~~~---~-g-~C~C~~g~~G~~C~ 134 (190)
++|.+ +.+|... . . .|.|+++|.|..|+
T Consensus 13 cpC~N-GGtC~~~~~~s~~~~C~Cp~g~~G~~Ce 45 (145)
T 2i9a_A 13 CDCLN-GGTCVSNKYFSNIHWCNCPKKFGGQHCE 45 (145)
T ss_dssp CCCCT-TCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred CCCCC-CCCcCCCccccCCccccCCCCCCCCcee
Confidence 35664 4477432 1 1 56776666666664
No 132
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=67.23 E-value=1.8 Score=36.93 Aligned_cols=33 Identities=24% Similarity=0.684 Sum_probs=25.4
Q ss_pred CCcccCCCcCCCCCccC---CCCeeeCC-CCCCCCCCc
Q psy15473 101 SRCVPCNCNGHADICDA---ESGRCICQ-DNTGGDNCE 134 (190)
Q Consensus 101 ~~C~~c~C~~~~~~C~~---~~g~C~C~-~g~~G~~C~ 134 (190)
+.|.+.+|.+ +.+|.. ....|.|+ +||+|..|+
T Consensus 2 d~C~s~PC~n-gG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 2 NPCCSNPCQN-RGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CTTTTCCCCT-TCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCC-CCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 5677788885 448873 23589999 999999997
No 133
>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R
Probab=64.37 E-value=5.1 Score=27.41 Aligned_cols=14 Identities=29% Similarity=1.001 Sum_probs=7.8
Q ss_pred CCCccCCCCcccCC
Q psy15473 14 DNCERCARGYYGNA 27 (190)
Q Consensus 14 ~~C~~C~~g~~g~~ 27 (190)
..|..|++|+|-+.
T Consensus 38 t~C~~C~~gty~~~ 51 (146)
T 2hey_R 38 TVCRPCGPGFYNDV 51 (146)
T ss_dssp CEEEECCTTEECCS
T ss_pred CCcccCCCCCEECC
Confidence 44555666665444
No 134
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=55.56 E-value=3.8 Score=22.61 Aligned_cols=18 Identities=33% Similarity=0.798 Sum_probs=12.3
Q ss_pred CceecCCCCeeeCCCCCCCC
Q psy15473 162 PCVQLDDDQVVCSECPRGYG 181 (190)
Q Consensus 162 ~C~~~~~~~~~C~~C~~G~~ 181 (190)
.|++.. ++++| .|++||.
T Consensus 11 ~C~n~~-gs~~C-~C~~Gy~ 28 (51)
T 1kig_L 11 FCREER-SEVRC-SCAHGYV 28 (51)
T ss_dssp CCCEET-TEECC-CCCTTEE
T ss_pred EeEcCC-CCeEE-eCCCCcE
Confidence 455544 56888 7888885
No 135
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=52.86 E-value=4.9 Score=33.84 Aligned_cols=29 Identities=28% Similarity=0.713 Sum_probs=24.4
Q ss_pred CCCCCCCCCceecCCCCeeeCCCCCCCCCC
Q psy15473 154 QCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183 (190)
Q Consensus 154 ~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~ 183 (190)
..+|+.++.|+....+.+.| .|+.||.|.
T Consensus 26 ~~~c~~~a~C~~~~~~~~~c-~C~~G~ag~ 54 (551)
T 3fby_A 26 PSECHEHADCVLERDGSRSC-VCAVGWAGN 54 (551)
T ss_dssp BCCCCTTEEEEECTTSCEEE-EECTTEESS
T ss_pred CCCCCCCCeeEeCCCCCEec-CCCCCCCCC
Confidence 45788889998877788999 999999875
No 136
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=51.51 E-value=11 Score=33.26 Aligned_cols=33 Identities=24% Similarity=0.660 Sum_probs=22.5
Q ss_pred CcCCCCCCCC-----CceecCCCCeeeCCCCCCCC---CCCCC
Q psy15473 152 CKQCPCPNQG-----PCVQLDDDQVVCSECPRGYG---GEKMS 186 (190)
Q Consensus 152 C~~~~C~~~g-----~C~~~~~~~~~C~~C~~G~~---G~~C~ 186 (190)
|...+|..+. +|++.. +.|+| .|++||. |..|+
T Consensus 310 C~~~~C~~~~~~C~~~C~~~~-~~y~C-~C~~Gy~l~~g~~C~ 350 (791)
T 3m0c_C 310 CGTNECLDNNGGCSHVCNDLK-IGYEC-LCPDGFQLVAQRRCE 350 (791)
T ss_dssp BSCCSTTTGGGGCSSEEEECS-BSEEE-ECCTTCEEETTTEEE
T ss_pred cccccccccccCccccccCCC-CCccc-CCCCCCccCCCCccc
Confidence 5555565432 677765 56999 9999995 66663
No 137
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=49.32 E-value=4.6 Score=22.46 Aligned_cols=19 Identities=26% Similarity=0.746 Sum_probs=12.7
Q ss_pred CceecCCCCeeeCCCCCCCC
Q psy15473 162 PCVQLDDDQVVCSECPRGYG 181 (190)
Q Consensus 162 ~C~~~~~~~~~C~~C~~G~~ 181 (190)
.|++...++++| .|++||.
T Consensus 12 ~C~n~~ggs~~C-~C~~Gy~ 30 (53)
T 2bz6_L 12 YCSDHTGTKRSC-RCHEGYS 30 (53)
T ss_dssp EEEEETTTEEEE-ECCTTEE
T ss_pred EeEcCCCCCEEe-eCCCCCE
Confidence 466654225888 8888885
No 138
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=44.84 E-value=9.6 Score=22.49 Aligned_cols=31 Identities=23% Similarity=0.554 Sum_probs=18.8
Q ss_pred CCCCCcCC--CCCCCCCceecCCCCeeeCCCCCCCC
Q psy15473 148 AVTDCKQC--PCPNQGPCVQLDDDQVVCSECPRGYG 181 (190)
Q Consensus 148 ~~~~C~~~--~C~~~g~C~~~~~~~~~C~~C~~G~~ 181 (190)
++++|... .|. -.|+....++++| .|++||.
T Consensus 4 d~~eC~~~nggC~--h~C~n~~g~s~~C-~C~~Gy~ 36 (69)
T 1kli_L 4 DQLICVNENGGCE--QYCSDHTGTKRSC-RCHEGYS 36 (69)
T ss_dssp CCCCTTSGGGGCS--SEEEEETTTEEEE-ECCTTEE
T ss_pred ccccccCCCCCcC--CEeEcCCCCCEEE-eCCCCCe
Confidence 34556532 243 2576665226899 8999995
No 139
>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}
Probab=43.53 E-value=37 Score=23.86 Aligned_cols=27 Identities=26% Similarity=0.678 Sum_probs=5.4
Q ss_pred CCCCCCccCCCCcccCCCCCCCCCCcCC
Q psy15473 128 TGGDNCERCARGYYGNALEGAVTDCKQC 155 (190)
Q Consensus 128 ~~G~~C~~C~~G~~g~~c~~~~~~C~~~ 155 (190)
+....|..|++|+|-+.- .....|+++
T Consensus 118 ~~dt~C~~C~~Gtfs~~~-s~~~~C~p~ 144 (177)
T 3qd6_R 118 VSDTICEPCPVGFFSNVS-SAFEKCHPW 144 (177)
T ss_dssp SCCCCCCC--------------------
T ss_pred CCCCccccCCCCcccCCC-CCCCcCcCc
Confidence 345678889999886532 112346554
No 140
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=41.10 E-value=11 Score=29.82 Aligned_cols=35 Identities=20% Similarity=0.560 Sum_probs=27.0
Q ss_pred CCCCCCCC-CceecCCCCeeeCCCCCCCCCCCCCCCCC
Q psy15473 154 QCPCPNQG-PCVQLDDDQVVCSECPRGYGGEKMSPGAQ 190 (190)
Q Consensus 154 ~~~C~~~g-~C~~~~~~~~~C~~C~~G~~G~~C~~c~~ 190 (190)
.|.|+.++ .|.... +.++| .|+....|..|++|+|
T Consensus 269 ~C~CnGHA~~C~~~~-g~~~C-~C~HnT~G~~Ce~C~p 304 (338)
T 3tbd_A 269 RCKCNLHANLCSMRE-GSLQC-ECEHNTTGPDCGKCKK 304 (338)
T ss_dssp EECCTTBCSCEEEET-TEEEE-CCCTTEESTTSCEECT
T ss_pred cccccCCcCccCCCC-CCcee-cCCCCCCCCCCcccCc
Confidence 45676664 576643 55789 9999999999999975
No 141
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=38.16 E-value=5.5 Score=27.24 Aligned_cols=24 Identities=21% Similarity=0.429 Sum_probs=17.9
Q ss_pred CCceecCCCCeeeCCCCCCCC----CCCCC
Q psy15473 161 GPCVQLDDDQVVCSECPRGYG----GEKMS 186 (190)
Q Consensus 161 g~C~~~~~~~~~C~~C~~G~~----G~~C~ 186 (190)
..|.+.. +.++| .|++||. |..|+
T Consensus 130 ~~C~n~~-g~~~C-~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 130 HFCNNFI-GGYFC-SCPPEYFLHDDMKNCG 157 (159)
T ss_dssp SEEEEET-TEEEE-ECCTTCEECTTSSCEE
T ss_pred CcccCcC-CCEEE-ecCCCcEECCCCCccc
Confidence 4677764 66999 9999998 55553
No 142
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=38.04 E-value=22 Score=24.08 Aligned_cols=14 Identities=36% Similarity=1.096 Sum_probs=5.4
Q ss_pred CCCCCccCCCCccc
Q psy15473 129 GGDNCERCARGYYG 142 (190)
Q Consensus 129 ~G~~C~~C~~G~~g 142 (190)
....|..|++|+|-
T Consensus 120 ~dt~C~~C~~GtfS 133 (142)
T 2uwi_A 120 GNTICKKCRKGTYS 133 (142)
T ss_dssp SCEEEEECC-----
T ss_pred CCCcccCCCCCccc
Confidence 34456677777664
No 143
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=37.84 E-value=13 Score=21.05 Aligned_cols=19 Identities=42% Similarity=0.992 Sum_probs=13.7
Q ss_pred CceecCCCCeeeCCCCCCCC
Q psy15473 162 PCVQLDDDQVVCSECPRGYG 181 (190)
Q Consensus 162 ~C~~~~~~~~~C~~C~~G~~ 181 (190)
.|+....++++| .|++||.
T Consensus 12 ~C~n~~~gs~~C-~C~~Gy~ 30 (59)
T 2wph_E 12 FCKNSADNKVVC-SCTEGYR 30 (59)
T ss_dssp EEEECSTTCEEE-ECCTTEE
T ss_pred EeEeCCCCCEEe-eCCCCcE
Confidence 466654346999 9999985
No 144
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=34.05 E-value=15 Score=23.45 Aligned_cols=31 Identities=29% Similarity=0.745 Sum_probs=21.0
Q ss_pred CcCCCCCCCCCceecCCCCeeeCCCCCCCCCC
Q psy15473 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183 (190)
Q Consensus 152 C~~~~C~~~g~C~~~~~~~~~C~~C~~G~~G~ 183 (190)
|....|..++.|....++...| .|.+||.|.
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C-~C~~gy~gd 37 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREEC-KCLLNYKQE 37 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEE-EECTTEEEE
T ss_pred eccCCCCCCCCeEEcCCCCEEE-EecCCeecC
Confidence 4444566677777665566778 788888664
No 145
>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*
Probab=27.41 E-value=49 Score=22.92 Aligned_cols=15 Identities=20% Similarity=0.678 Sum_probs=0.0
Q ss_pred CCCCccCCCCcccCC
Q psy15473 130 GDNCERCARGYYGNA 144 (190)
Q Consensus 130 G~~C~~C~~G~~g~~ 144 (190)
...|..|++|+|-+.
T Consensus 121 dt~C~~C~~Gtfs~~ 135 (167)
T 1jma_B 121 DTLCQNCPPGTFSPN 135 (167)
T ss_dssp ---------------
T ss_pred CCccccCCCCceeCC
Confidence 456888999988653
No 146
>4fhq_A Tumor necrosis factor receptor superfamily member; cysteine rich domain, TNF receptor, structural genomics, PSI protein structure initiative; 2.25A {Homo sapiens} PDB: 2aw2_B*
Probab=21.38 E-value=26 Score=23.57 Aligned_cols=7 Identities=14% Similarity=-0.064 Sum_probs=5.0
Q ss_pred CCCCccc
Q psy15473 86 QLTGYHH 92 (190)
Q Consensus 86 C~~G~~g 92 (190)
|++|||-
T Consensus 85 C~~G~~c 91 (134)
T 4fhq_A 85 CSPGHFC 91 (134)
T ss_dssp ECTTEEE
T ss_pred CCCCCEe
Confidence 7777774
Done!